BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8928
(134 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5ZIX3|EAF6_CHICK Chromatin modification-related protein MEAF6 OS=Gallus gallus
GN=MEAF6 PE=2 SV=1
Length = 182
Score = 135 bits (340), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 73/134 (54%), Positives = 90/134 (67%), Gaps = 28/134 (20%)
Query: 1 MSSKGGGAPAM-NVRSELADLVKKKAEIAETLASLERQIYAFEGSYLEDTQLYGNETLAS 59
+ +K GG P + + R ELA+LVK+K E+AETLA+L
Sbjct: 4 LHAKAGGPPQIPDTRRELAELVKRKQELAETLANL------------------------- 38
Query: 60 LERQIYAFEGSYLEDTQLYGNVIRGWDRYLSSNKTNNT-NMERNRKFKEAERLFSLSSIT 118
ERQIYAFEGSYLEDTQ+YGN+IRGWDRYL++ K +N+ N RNRKFKEAERLFS SS+T
Sbjct: 39 -ERQIYAFEGSYLEDTQMYGNIIRGWDRYLTNQKNSNSKNDRRNRKFKEAERLFSKSSVT 97
Query: 119 SSAAVSGLIESQDK 132
S+AAVS L QD+
Sbjct: 98 SAAAVSALAGVQDQ 111
>sp|Q9HAF1|EAF6_HUMAN Chromatin modification-related protein MEAF6 OS=Homo sapiens
GN=MEAF6 PE=1 SV=1
Length = 191
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/133 (53%), Positives = 86/133 (64%), Gaps = 27/133 (20%)
Query: 1 MSSKGGGAPAMNVRSELADLVKKKAEIAETLASLERQIYAFEGSYLEDTQLYGNETLASL 60
M +K + R ELA+LVK+K E+AETLA+L
Sbjct: 3 MHNKAAPPQIPDTRRELAELVKRKQELAETLANL-------------------------- 36
Query: 61 ERQIYAFEGSYLEDTQLYGNVIRGWDRYLSSNKTNNT-NMERNRKFKEAERLFSLSSITS 119
ERQIYAFEGSYLEDTQ+YGN+IRGWDRYL++ K +N+ N RNRKFKEAERLFS SS+TS
Sbjct: 37 ERQIYAFEGSYLEDTQMYGNIIRGWDRYLTNQKNSNSKNDRRNRKFKEAERLFSKSSVTS 96
Query: 120 SAAVSGLIESQDK 132
+AAVS L QD+
Sbjct: 97 AAAVSALAGVQDQ 109
>sp|Q58CU0|EAF6_BOVIN Chromatin modification-related protein MEAF6 OS=Bos taurus GN=MEAF6
PE=2 SV=2
Length = 191
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/133 (53%), Positives = 86/133 (64%), Gaps = 27/133 (20%)
Query: 1 MSSKGGGAPAMNVRSELADLVKKKAEIAETLASLERQIYAFEGSYLEDTQLYGNETLASL 60
M +K + R ELA+LVK+K E+AETLA+L
Sbjct: 3 MHNKAAPPQIPDTRRELAELVKRKQELAETLANL-------------------------- 36
Query: 61 ERQIYAFEGSYLEDTQLYGNVIRGWDRYLSSNKTNNT-NMERNRKFKEAERLFSLSSITS 119
ERQIYAFEGSYLEDTQ+YGN+IRGWDRYL++ K +N+ N RNRKFKEAERLFS SS+TS
Sbjct: 37 ERQIYAFEGSYLEDTQMYGNIIRGWDRYLTNQKNSNSKNDRRNRKFKEAERLFSKSSVTS 96
Query: 120 SAAVSGLIESQDK 132
+AAVS L QD+
Sbjct: 97 AAAVSALAGVQDQ 109
>sp|Q2VPQ9|EAF6_MOUSE Chromatin modification-related protein MEAF6 OS=Mus musculus
GN=Meaf6 PE=2 SV=1
Length = 191
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/133 (53%), Positives = 86/133 (64%), Gaps = 27/133 (20%)
Query: 1 MSSKGGGAPAMNVRSELADLVKKKAEIAETLASLERQIYAFEGSYLEDTQLYGNETLASL 60
M +K + R ELA+LVK+K E+AETLA+L
Sbjct: 3 MHNKTAPPQIPDTRRELAELVKRKQELAETLANL-------------------------- 36
Query: 61 ERQIYAFEGSYLEDTQLYGNVIRGWDRYLSSNKTNNT-NMERNRKFKEAERLFSLSSITS 119
ERQIYAFEGSYLEDTQ+YGN+IRGWDRYL++ K +N+ N RNRKFKEAERLFS SS+TS
Sbjct: 37 ERQIYAFEGSYLEDTQMYGNIIRGWDRYLTNQKNSNSKNDRRNRKFKEAERLFSKSSVTS 96
Query: 120 SAAVSGLIESQDK 132
+AAVS L QD+
Sbjct: 97 AAAVSALAGVQDQ 109
>sp|Q68ER9|EAF6_XENTR Chromatin modification-related protein MEAF6 OS=Xenopus tropicalis
GN=meaf6 PE=2 SV=1
Length = 191
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 71/133 (53%), Positives = 86/133 (64%), Gaps = 27/133 (20%)
Query: 1 MSSKGGGAPAMNVRSELADLVKKKAEIAETLASLERQIYAFEGSYLEDTQLYGNETLASL 60
M +K + R ELA+LVK+K E+AETLA+L
Sbjct: 3 MHNKATPPQIPDTRRELAELVKRKQELAETLANL-------------------------- 36
Query: 61 ERQIYAFEGSYLEDTQLYGNVIRGWDRYLSSNKTNNT-NMERNRKFKEAERLFSLSSITS 119
ERQIYAFEGSYLEDTQ+YGN+IRGWDRYL++ K +N+ N RNRKFKEAERLFS SS+TS
Sbjct: 37 ERQIYAFEGSYLEDTQMYGNIIRGWDRYLTNQKNSNSKNDRRNRKFKEAERLFSKSSVTS 96
Query: 120 SAAVSGLIESQDK 132
+AAVS L QD+
Sbjct: 97 AAAVSALAGVQDQ 109
>sp|Q52KD8|EAF6_XENLA Chromatin modification-related protein MEAF6 OS=Xenopus laevis
GN=meaf6 PE=2 SV=1
Length = 188
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 71/133 (53%), Positives = 86/133 (64%), Gaps = 27/133 (20%)
Query: 1 MSSKGGGAPAMNVRSELADLVKKKAEIAETLASLERQIYAFEGSYLEDTQLYGNETLASL 60
M +K + R ELA+LVK+K E+AETLA+L
Sbjct: 3 MHNKATPTQIPDTRRELAELVKRKQELAETLANL-------------------------- 36
Query: 61 ERQIYAFEGSYLEDTQLYGNVIRGWDRYLSSNKTNNT-NMERNRKFKEAERLFSLSSITS 119
ERQIYAFEGSYLEDTQ+YGN+IRGWDRYL++ K +N+ N RNRKFKEAERLFS SS+TS
Sbjct: 37 ERQIYAFEGSYLEDTQMYGNIIRGWDRYLTNQKNSNSKNDRRNRKFKEAERLFSKSSVTS 96
Query: 120 SAAVSGLIESQDK 132
+AAVS L QD+
Sbjct: 97 AAAVSSLAGVQDQ 109
>sp|Q6AZD3|EAF6_DANRE Chromatin modification-related protein MEAF6 OS=Danio rerio
GN=meaf6 PE=2 SV=1
Length = 192
Score = 122 bits (305), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 65/127 (51%), Positives = 80/127 (62%), Gaps = 27/127 (21%)
Query: 1 MSSKGGGAPAMNVRSELADLVKKKAEIAETLASLERQIYAFEGSYLEDTQLYGNETLASL 60
M +K + R EL++LVK+K E+AETL +LE
Sbjct: 3 MHAKATPPQIPDTRRELSELVKRKQELAETLVNLE------------------------- 37
Query: 61 ERQIYAFEGSYLEDTQLYGNVIRGWDRYLSSNKTNNTNME-RNRKFKEAERLFSLSSITS 119
RQIYAFEGSYLEDTQ+YGN+IRGWDRYL++ K +N+ + RNRKFKEAERLFS SS+TS
Sbjct: 38 -RQIYAFEGSYLEDTQMYGNIIRGWDRYLTNQKNSNSKTDRRNRKFKEAERLFSKSSVTS 96
Query: 120 SAAVSGL 126
AAV L
Sbjct: 97 VAAVCAL 103
>sp|O14240|EAF6_SCHPO Chromatin modification-related protein eaf6 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=eaf6 PE=1 SV=1
Length = 138
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 56 TLASLERQIYAFEGSYLEDTQLYGNVIRGWDRYLSSNKTNNTNMERNRKFKEAERLF 112
+L LE IY EGSYLE T GN+IRG++ L K N +N+ R + E++RLF
Sbjct: 38 SLIGLEDSIYRLEGSYLEKTSGTGNIIRGFEGLL---KNNASNLRRRADYSESDRLF 91
>sp|Q6C626|EAF6_YARLI Chromatin modification-related protein EAF6 OS=Yarrowia lipolytica
(strain CLIB 122 / E 150) GN=EAF6 PE=3 SV=1
Length = 135
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 48/104 (46%), Gaps = 32/104 (30%)
Query: 13 VRSELADLVKKKAEIAETLASLERQIYAFEGSYLEDTQLYGNETLASLERQIYAFEGSYL 72
++ +L D + KK + L SLE QI+ EG+YLE+T
Sbjct: 12 LKKQLKDNINKKKTHDKNLNSLEEQIFTLEGAYLEETS---------------------- 49
Query: 73 EDTQLYGNVIRGWDRYLSSNKTNNTNMERNRKFKEAERLFSLSS 116
+GN+++G+D Y+ ++ + F E +RLFSLSS
Sbjct: 50 -----HGNLVKGFDTYIKGAQSKKRYV-----FNEDDRLFSLSS 83
>sp|Q6FJ46|EAF6_CANGA Chromatin modification-related protein EAF6 OS=Candida glabrata
(strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 /
NRRL Y-65) GN=EAF6 PE=3 SV=1
Length = 91
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 30/104 (28%)
Query: 13 VRSELADLVKKKAEIAETLASLERQIYAFEGSYLEDTQLYGNETLASLERQIYAFEGSYL 72
V+ EL L+ + E+ + L L+++IY E Y + +G
Sbjct: 8 VKQELKALLADRKELEDKLDKLQQEIYDKESEYFD-------------------VDGG-- 46
Query: 73 EDTQLYGNVIRGWDRYLSSNKTNNTNMERNRKFKEAERLFSLSS 116
++ Y N++RG+D +S ++NN+NM N +R+FSLSS
Sbjct: 47 --SKSYHNILRGFDG-MSRTQSNNSNMTNN------DRIFSLSS 81
>sp|Q6BI21|EAF6_DEBHA Chromatin modification-related protein EAF6 OS=Debaryomyces
hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC
0083 / IGC 2968) GN=EAF6 PE=3 SV=1
Length = 170
Score = 36.6 bits (83), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 5/62 (8%)
Query: 57 LASLERQIYAFEGSYLEDTQLYGNVIRGWDRYLSSNKTNNTNMERNR-KFKEAERLFSLS 115
L+ LE IY E Y ++ +YGN+++G+ + KTN + + R + + + +FSLS
Sbjct: 39 LSKLEDSIYEKENEYFNES-VYGNIVKGFQNFT---KTNTGGLNKRRITYTDDDHIFSLS 94
Query: 116 SI 117
S+
Sbjct: 95 SV 96
>sp|P47128|EAF6_YEAST Chromatin modification-related protein EAF6 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=EAF6 PE=1
SV=1
Length = 113
Score = 33.5 bits (75), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 50/106 (47%), Gaps = 15/106 (14%)
Query: 13 VRSELADLVKKKAEIAETLASLERQIYAFEGSYLEDTQLYGNETLASLERQIYAFEGSYL 72
+++EL ++ + E +T +L+++IY E Y N + G++
Sbjct: 11 LKAELKKSLQDRREQEDTFDNLQQEIYDKETEYFSHN---SNNNHS-------GHGGAHG 60
Query: 73 EDTQLYGNVIRGWDRYLSSNKTNNTNMERNRKFKEAERLFSLSSIT 118
+ GN+I+G+D + S+ ++ + F +R+FSLSS T
Sbjct: 61 SKSHYSGNIIKGFDTFSKSHHSH-----ADSAFNNNDRIFSLSSAT 101
>sp|P81321|Y80A_METJA Uncharacterized protein MJ0808.1 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 /
NBRC 100440) GN=MJ0808.1 PE=4 SV=1
Length = 138
Score = 32.3 bits (72), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Query: 20 LVKKKAEIAETLASLERQIYAFEGSYLEDTQLYGNETLASLERQIYAFEGSYL 72
+ +K E+ + + +++QI E + L D Q N+T+ ++RQIY+ E L
Sbjct: 16 MTQKIQELNQQITQIKKQIQIIEQNNLSDQQ---NQTIQKIKRQIYSIEFDIL 65
>sp|B1YEH3|GLYA_EXIS2 Serine hydroxymethyltransferase OS=Exiguobacterium sibiricum
(strain DSM 17290 / JCM 13490 / 255-15) GN=glyA PE=3
SV=1
Length = 419
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 17/45 (37%), Positives = 24/45 (53%)
Query: 1 MSSKGGGAPAMNVRSELADLVKKKAEIAETLASLERQIYAFEGSY 45
M+S+G M +EL +LV K E ETL S +Q+ A G +
Sbjct: 368 MTSRGFKEAEMKQIAELIELVLKNPEDQETLTSAHKQVLALTGRF 412
>sp|Q4P5U4|DBP4_USTMA ATP-dependent RNA helicase DBP4 OS=Ustilago maydis (strain 521 /
FGSC 9021) GN=DBP4 PE=3 SV=1
Length = 869
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Query: 4 KGGGAPAMNVRSELADLVKKKAEIAETLASLERQIYAF 41
KGG AP + RS+ A +K+ AE AE +A LE+ I AF
Sbjct: 15 KGGAAPHLKSRSKNARKLKRSAEDAE-IAQLEQGIQAF 51
>sp|Q3J6T9|FMT_NITOC Methionyl-tRNA formyltransferase OS=Nitrosococcus oceani (strain
ATCC 19707 / NCIMB 11848) GN=fmt PE=3 SV=1
Length = 323
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Query: 17 LADLVKKKAEIAETLASLERQIYAFEGSYLEDTQLYGNETLASLERQIYAFEGSYLEDTQ 76
L L++KKA IA TL + YA + E+ L ++ LERQ+ AF + TQ
Sbjct: 184 LPSLLEKKANIA-TLQDESQACYAPKIRK-EEAWLDWSQPAVLLERQVRAFNPWPVAQTQ 241
Query: 77 LYGNVIRGW 85
+ G +R W
Sbjct: 242 IGGKTLRVW 250
>sp|Q59QC2|EAF6_CANAL Chromatin modification-related protein EAF6 OS=Candida albicans
(strain SC5314 / ATCC MYA-2876) GN=EAF6 PE=3 SV=1
Length = 211
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 47/107 (43%), Gaps = 28/107 (26%)
Query: 11 MNVRSELADLVKKKAEIAETLASLERQIYAFEGSYLEDTQLYGNETLASLERQIYAFEGS 70
+ ++++L + KK E+ L +LE IY E Y E++ L
Sbjct: 65 VELKNKLIQQILKKQELTRKLTTLEDSIYQKEIDYFEESPL------------------- 105
Query: 71 YLEDTQLYGNVIRGWDRYLSSNKTNNTNMERNRKFKEAERLFSLSSI 117
GN+++G++ + ++ N +R + E + +FSLSS+
Sbjct: 106 --------GNIVKGFENFSKTSGGGGAN-KRKIVYSEDDHIFSLSSV 143
>sp|Q6FEC9|HIS1_ACIAD ATP phosphoribosyltransferase OS=Acinetobacter sp. (strain ADP1)
GN=hisG PE=3 SV=1
Length = 228
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 5/62 (8%)
Query: 22 KKKAEIAETLASLERQIYAFEGSYLEDTQLYGNETLASLERQIYAFEGSYLEDTQLYGNV 81
K + +IA +L RQ YA G ++ +LYG+ LA L G Y+ D GN
Sbjct: 127 KGRLKIATKYVNLTRQYYASLGEQVDVIKLYGSMELAPL-----VGLGDYIVDVVDTGNT 181
Query: 82 IR 83
+R
Sbjct: 182 LR 183
>sp|Q5D144|TFAM_PIG Transcription factor A, mitochondrial OS=Sus scrofa GN=TFAM PE=2
SV=1
Length = 246
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 13/66 (19%)
Query: 10 AMNVRSELADLVKKKAEIAETLASLERQIYAFEGSYLEDTQLYGNET-----------LA 58
A N ++ ++L+KK AE+ L E++IY E +Y D Q+Y E +
Sbjct: 70 AQNPDAKNSELIKKIAELWRELPDSEKKIY--EDAYRADWQVYKEEVNRIQEQLTPSQMV 127
Query: 59 SLERQI 64
SLE++I
Sbjct: 128 SLEKEI 133
>sp|A8MXQ7|YH010_HUMAN Putative IQ motif and ankyrin repeat domain-containing protein
LOC642574 OS=Homo sapiens PE=5 SV=2
Length = 604
Score = 29.3 bits (64), Expect = 6.9, Method: Composition-based stats.
Identities = 35/116 (30%), Positives = 52/116 (44%), Gaps = 19/116 (16%)
Query: 2 SSKGGGAPAMNVRSELADLVKKKAEIAETLASLERQIYAFEGSYLEDTQLYGNETLASL- 60
++ GG A+ +R+EL K T L R AF G L E L L
Sbjct: 222 AAAGGQPLAIQLRAELGASPNSKGAFGPT--PLYRA--AFGG------HLAAVEVLLKLG 271
Query: 61 -ERQIYAFEGSYLE-----DTQLYGNVIRGWDRYLSSNKTNNTNMERNRKFKEAER 110
+ ++YA +GS E DT + +V+R WD L+ N E+ R+ +EA+R
Sbjct: 272 ADPRVYAEDGSTPERVASLDTVV--SVLRSWDLSLTEAMLQNMEAEQQRRAQEAQR 325
>sp|A7HTI8|ARLY_PARL1 Argininosuccinate lyase OS=Parvibaculum lavamentivorans (strain
DS-1 / DSM 13023 / NCIMB 13966) GN=argH PE=3 SV=1
Length = 460
Score = 28.9 bits (63), Expect = 9.4, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 26/54 (48%)
Query: 11 MNVRSELADLVKKKAEIAETLASLERQIYAFEGSYLEDTQLYGNETLASLERQI 64
MNV S LADL+ A T S Q+ Y+ DT + +E LA +R +
Sbjct: 87 MNVESRLADLIGAAAGRLHTARSRNDQVATDFKLYIRDTIDHLDEQLADFQRAL 140
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.310 0.126 0.340
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,066,753
Number of Sequences: 539616
Number of extensions: 1689156
Number of successful extensions: 4699
Number of sequences better than 100.0: 41
Number of HSP's better than 100.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 4662
Number of HSP's gapped (non-prelim): 46
length of query: 134
length of database: 191,569,459
effective HSP length: 100
effective length of query: 34
effective length of database: 137,607,859
effective search space: 4678667206
effective search space used: 4678667206
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 55 (25.8 bits)