Query psy8929
Match_columns 160
No_of_seqs 199 out of 1186
Neff 8.8
Searched_HMMs 46136
Date Fri Aug 16 23:03:28 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8929.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/8929hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 cd01264 PH_melted Melted pleck 99.9 3.5E-23 7.5E-28 136.5 10.7 87 53-142 7-101 (101)
2 cd01251 PH_centaurin_alpha Cen 99.9 8.5E-23 1.8E-27 136.2 10.2 87 54-144 7-102 (103)
3 cd01233 Unc104 Unc-104 pleckst 99.9 2.1E-22 4.5E-27 133.7 10.2 85 53-142 9-98 (100)
4 cd01260 PH_CNK Connector enhan 99.9 4.2E-22 9.1E-27 131.2 9.9 81 58-141 16-96 (96)
5 cd01265 PH_PARIS-1 PARIS-1 ple 99.9 8.4E-22 1.8E-26 129.6 10.3 79 58-141 13-93 (95)
6 cd01238 PH_Tec Tec pleckstrin 99.9 1E-21 2.2E-26 131.7 10.0 81 58-140 17-105 (106)
7 cd01247 PH_GPBP Goodpasture an 99.9 2.6E-21 5.7E-26 126.2 10.7 85 53-140 6-90 (91)
8 cd01244 PH_RasGAP_CG9209 RAS_G 99.9 2.5E-21 5.4E-26 127.5 10.2 77 60-141 19-98 (98)
9 cd01236 PH_outspread Outspread 99.9 5.5E-21 1.2E-25 127.1 10.7 80 57-140 19-102 (104)
10 cd01235 PH_SETbf Set binding f 99.9 6.4E-21 1.4E-25 126.4 10.3 86 53-142 6-101 (101)
11 cd01252 PH_cytohesin Cytohesin 99.8 2.6E-20 5.7E-25 128.3 11.2 87 53-143 7-114 (125)
12 cd01257 PH_IRS Insulin recepto 99.8 3.8E-20 8.2E-25 122.6 10.4 81 59-140 11-100 (101)
13 cd01245 PH_RasGAP_CG5898 RAS G 99.8 6.8E-20 1.5E-24 120.4 9.2 82 54-140 7-97 (98)
14 cd01266 PH_Gab Gab (Grb2-assoc 99.8 2.5E-19 5.3E-24 120.5 9.7 79 59-141 16-107 (108)
15 cd01246 PH_oxysterol_bp Oxyste 99.8 8E-19 1.7E-23 113.8 10.4 83 54-141 7-91 (91)
16 cd01250 PH_centaurin Centaurin 99.8 2.2E-18 4.9E-23 112.4 9.7 78 59-141 13-94 (94)
17 cd01263 PH_anillin Anillin Ple 99.8 6.6E-18 1.4E-22 115.1 8.8 84 58-141 15-122 (122)
18 cd01253 PH_beta_spectrin Beta- 99.7 8E-17 1.7E-21 107.4 10.8 81 58-140 19-103 (104)
19 cd01241 PH_Akt Akt pleckstrin 99.7 6.5E-17 1.4E-21 107.6 9.6 85 53-142 8-102 (102)
20 PF00169 PH: PH domain; Inter 99.7 2.8E-16 6E-21 103.1 11.1 88 56-143 11-104 (104)
21 cd01230 PH_EFA6 EFA6 Pleckstri 99.7 4.1E-16 9E-21 105.8 10.9 88 56-143 20-112 (117)
22 cd01237 Unc112 Unc-112 pleckst 99.7 2.6E-16 5.6E-21 103.9 9.4 87 55-142 13-103 (106)
23 KOG0930|consensus 99.7 1.3E-16 2.8E-21 120.7 8.8 87 53-143 268-376 (395)
24 PF15409 PH_8: Pleckstrin homo 99.7 1.5E-15 3.2E-20 97.7 9.8 82 53-141 5-88 (89)
25 cd01254 PH_PLD Phospholipase D 99.6 3.1E-15 6.7E-20 102.4 9.7 81 57-141 28-121 (121)
26 cd01256 PH_dynamin Dynamin ple 99.6 2.5E-14 5.3E-19 92.3 9.2 81 57-141 14-104 (110)
27 cd01219 PH_FGD FGD (faciogenit 99.6 7.4E-14 1.6E-18 92.7 10.5 89 54-143 10-100 (101)
28 PF15410 PH_9: Pleckstrin homo 99.5 1.4E-13 3.1E-18 93.9 10.8 89 53-142 17-118 (119)
29 smart00233 PH Pleckstrin homol 99.5 6.8E-13 1.5E-17 85.7 11.6 84 58-142 14-101 (102)
30 PF15413 PH_11: Pleckstrin hom 99.5 2.1E-13 4.5E-18 92.2 8.6 82 59-141 13-112 (112)
31 cd00821 PH Pleckstrin homology 99.4 4E-12 8.7E-17 81.3 10.7 82 59-141 13-96 (96)
32 cd00900 PH-like Pleckstrin hom 99.4 4.4E-12 9.5E-17 81.7 10.5 79 59-141 16-99 (99)
33 cd01220 PH_CDEP Chondrocyte-de 99.4 4E-12 8.8E-17 84.0 10.2 82 60-143 15-98 (99)
34 cd01236 PH_outspread Outspread 99.3 1.5E-12 3.2E-17 86.6 3.9 71 5-85 21-93 (104)
35 cd01238 PH_Tec Tec pleckstrin 99.3 2.1E-12 4.6E-17 86.4 4.6 75 6-82 19-93 (106)
36 KOG3640|consensus 99.3 4.5E-12 9.8E-17 108.5 7.1 124 18-144 959-1108(1116)
37 cd01251 PH_centaurin_alpha Cen 99.2 1E-11 2.2E-16 82.7 4.7 37 5-44 13-49 (103)
38 cd01264 PH_melted Melted pleck 99.2 1.2E-11 2.6E-16 81.7 4.5 82 5-92 16-97 (101)
39 cd01233 Unc104 Unc-104 pleckst 99.2 3.6E-11 7.8E-16 79.6 4.7 74 4-85 14-87 (100)
40 cd01247 PH_GPBP Goodpasture an 99.2 5.8E-11 1.3E-15 77.3 5.4 44 2-46 9-52 (91)
41 cd01265 PH_PARIS-1 PARIS-1 ple 99.2 1.4E-10 2.9E-15 76.2 6.9 68 5-85 14-83 (95)
42 cd01260 PH_CNK Connector enhan 99.1 1.9E-10 4.2E-15 75.4 7.0 37 6-45 18-54 (96)
43 cd01257 PH_IRS Insulin recepto 99.1 1.8E-10 4E-15 76.2 6.9 50 3-52 9-66 (101)
44 cd01242 PH_ROK Rok (Rho- assoc 99.1 2.1E-09 4.6E-14 71.2 10.6 84 60-143 18-111 (112)
45 KOG1090|consensus 99.1 3.2E-11 7E-16 104.1 2.3 87 53-143 1641-1732(1732)
46 cd01263 PH_anillin Anillin Ple 99.0 4E-10 8.7E-15 76.9 5.6 44 4-47 15-58 (122)
47 cd01235 PH_SETbf Set binding f 99.0 2.3E-09 4.9E-14 70.7 7.9 43 3-48 10-54 (101)
48 KOG2059|consensus 99.0 5.3E-10 1.1E-14 93.8 5.2 82 58-144 582-666 (800)
49 PF14593 PH_3: PH domain; PDB: 99.0 8.1E-09 1.8E-13 68.5 9.8 73 62-143 27-100 (104)
50 cd01244 PH_RasGAP_CG9209 RAS_G 99.0 2.3E-09 4.9E-14 70.6 7.1 43 5-51 18-60 (98)
51 cd01239 PH_PKD Protein kinase 99.0 4.5E-09 9.9E-14 70.1 8.4 78 60-141 14-117 (117)
52 cd01218 PH_phafin2 Phafin2 Pl 99.0 1.4E-08 3E-13 67.6 10.3 82 60-143 16-99 (104)
53 cd01266 PH_Gab Gab (Grb2-assoc 98.9 6.1E-09 1.3E-13 69.8 7.3 40 5-47 16-62 (108)
54 cd01252 PH_cytohesin Cytohesin 98.9 4.9E-09 1.1E-13 72.0 6.8 38 4-44 12-49 (125)
55 cd01259 PH_Apbb1ip Apbb1ip (Am 98.9 9.8E-09 2.1E-13 68.2 7.3 83 58-141 12-107 (114)
56 cd01261 PH_SOS Son of Sevenles 98.9 5.1E-08 1.1E-12 65.6 10.8 84 59-143 17-110 (112)
57 cd01243 PH_MRCK MRCK (myotonic 98.9 4.8E-08 1E-12 65.7 10.6 83 59-141 17-118 (122)
58 cd01237 Unc112 Unc-112 pleckst 98.7 2.5E-08 5.5E-13 66.0 5.3 42 5-47 17-58 (106)
59 KOG0248|consensus 98.7 1.3E-08 2.8E-13 85.5 4.3 139 1-143 258-466 (936)
60 cd01234 PH_CADPS CADPS (Ca2+-d 98.7 2.2E-08 4.7E-13 65.5 3.9 81 57-143 14-111 (117)
61 cd01249 PH_oligophrenin Oligop 98.6 5.5E-07 1.2E-11 59.5 8.9 80 59-139 14-102 (104)
62 cd01254 PH_PLD Phospholipase D 98.6 1.8E-07 3.9E-12 64.0 6.8 39 6-47 31-69 (121)
63 cd01246 PH_oxysterol_bp Oxyste 98.6 2.6E-07 5.5E-12 59.4 7.2 40 4-44 11-50 (91)
64 cd01241 PH_Akt Akt pleckstrin 98.6 1.5E-07 3.2E-12 62.5 6.1 37 4-43 13-50 (102)
65 cd01245 PH_RasGAP_CG5898 RAS G 98.6 1E-07 2.3E-12 62.7 4.7 36 5-43 13-52 (98)
66 KOG0521|consensus 98.6 6.5E-08 1.4E-12 84.1 4.6 85 54-143 283-369 (785)
67 KOG0930|consensus 98.5 1.2E-07 2.7E-12 72.4 5.2 39 3-44 272-310 (395)
68 PTZ00267 NIMA-related protein 98.5 2.7E-07 5.9E-12 76.6 7.7 84 60-143 390-477 (478)
69 KOG1117|consensus 98.5 9.6E-08 2.1E-12 82.0 4.5 134 8-146 518-714 (1186)
70 cd01250 PH_centaurin Centaurin 98.5 3.3E-07 7.1E-12 59.2 5.5 39 5-44 13-51 (94)
71 cd01258 PH_syntrophin Syntroph 98.4 1.5E-06 3.2E-11 58.0 7.1 83 58-140 15-107 (108)
72 PF15409 PH_8: Pleckstrin homo 98.4 1.9E-06 4.1E-11 55.5 7.1 38 5-45 11-50 (89)
73 KOG1739|consensus 98.4 9E-07 2E-11 72.0 6.3 82 58-143 36-117 (611)
74 cd01256 PH_dynamin Dynamin ple 98.4 7.9E-07 1.7E-11 57.7 4.9 33 8-43 19-51 (110)
75 PF00169 PH: PH domain; Inter 98.4 1E-06 2.3E-11 57.1 5.6 46 4-50 13-58 (104)
76 KOG0690|consensus 98.4 1.4E-06 3.1E-11 68.6 6.8 90 53-143 22-117 (516)
77 cd01262 PH_PDK1 3-Phosphoinosi 98.3 6.6E-06 1.4E-10 52.8 8.0 74 61-142 14-88 (89)
78 PTZ00283 serine/threonine prot 98.3 2E-06 4.4E-11 71.8 7.1 55 93-147 435-494 (496)
79 KOG1117|consensus 98.3 1.3E-06 2.9E-11 75.3 5.5 128 8-143 104-280 (1186)
80 KOG3723|consensus 98.3 2.5E-07 5.5E-12 76.7 1.1 89 57-148 749-842 (851)
81 cd01224 PH_Collybistin Collybi 98.3 2.5E-05 5.3E-10 52.1 10.4 77 63-140 19-105 (109)
82 cd01240 PH_beta-ARK Beta adren 98.2 1.5E-06 3.2E-11 57.4 4.0 87 53-143 10-99 (116)
83 cd01253 PH_beta_spectrin Beta- 98.2 3.1E-06 6.8E-11 56.0 5.7 38 5-43 20-59 (104)
84 cd01225 PH_Cool_Pix Cool (clon 98.2 1.7E-05 3.7E-10 52.8 8.9 80 62-142 28-109 (111)
85 KOG0932|consensus 98.2 5.4E-07 1.2E-11 74.5 1.6 85 57-143 527-618 (774)
86 PF12814 Mcp5_PH: Meiotic cell 98.2 2.6E-05 5.6E-10 53.4 9.6 84 59-143 27-122 (123)
87 PF15413 PH_11: Pleckstrin hom 98.2 1.8E-06 3.9E-11 58.2 3.6 26 3-28 10-37 (112)
88 cd01222 PH_clg Clg (common-sit 98.2 3.8E-05 8.2E-10 50.4 9.7 77 63-142 17-95 (97)
89 KOG4807|consensus 98.0 1.4E-08 3E-13 80.6 -10.4 85 58-143 31-115 (593)
90 cd01226 PH_exo84 Exocyst compl 98.0 0.00011 2.5E-09 48.2 9.4 53 89-143 45-99 (100)
91 PLN02866 phospholipase D 98.0 5.7E-05 1.2E-09 67.2 10.3 80 60-143 216-308 (1068)
92 KOG3531|consensus 98.0 5.8E-06 1.3E-10 71.2 3.7 84 60-147 938-1024(1036)
93 KOG3751|consensus 98.0 2E-05 4.4E-10 64.9 6.2 86 56-142 327-424 (622)
94 PF15406 PH_6: Pleckstrin homo 97.9 4.2E-05 9E-10 50.6 6.4 67 67-140 44-111 (112)
95 KOG0248|consensus 97.9 8.5E-06 1.8E-10 69.0 3.0 88 53-144 256-343 (936)
96 cd01231 PH_Lnk LNK-family Plec 97.8 0.00015 3.3E-09 47.3 7.2 79 60-141 19-107 (107)
97 PLN00188 enhanced disease resi 97.8 0.0001 2.3E-09 63.2 7.9 85 59-144 20-111 (719)
98 KOG4807|consensus 97.7 2E-07 4.3E-12 74.1 -8.5 56 6-61 33-88 (593)
99 cd01232 PH_TRIO Trio pleckstri 97.7 0.0011 2.4E-08 44.8 10.0 79 64-143 26-113 (114)
100 PF15408 PH_7: Pleckstrin homo 97.6 2E-05 4.3E-10 49.9 1.2 76 61-140 11-95 (104)
101 smart00233 PH Pleckstrin homol 97.6 0.00058 1.3E-08 43.2 8.1 45 5-50 15-59 (102)
102 cd01239 PH_PKD Protein kinase 97.6 0.00021 4.5E-09 47.9 5.3 72 3-81 11-82 (117)
103 cd01230 PH_EFA6 EFA6 Pleckstri 97.5 0.00034 7.3E-09 47.5 6.2 40 5-44 23-66 (117)
104 cd01223 PH_Vav Vav pleckstrin 97.5 0.0013 2.7E-08 44.4 8.4 80 63-143 21-112 (116)
105 cd01248 PH_PLC Phospholipase C 97.4 0.0028 6.1E-08 42.7 8.9 73 64-140 23-114 (115)
106 KOG3640|consensus 97.3 0.0001 2.2E-09 64.5 1.6 59 6-64 1006-1069(1116)
107 cd00900 PH-like Pleckstrin hom 97.2 0.0029 6.3E-08 39.8 7.7 37 6-44 17-53 (99)
108 cd01259 PH_Apbb1ip Apbb1ip (Am 97.2 0.00021 4.6E-09 47.6 2.3 39 4-42 12-50 (114)
109 cd01221 PH_ephexin Ephexin Ple 97.2 0.0036 7.9E-08 42.9 7.8 78 62-139 27-119 (125)
110 cd00821 PH Pleckstrin homology 97.1 0.0045 9.8E-08 38.6 7.3 38 6-43 14-51 (96)
111 PF14593 PH_3: PH domain; PDB: 97.1 0.0051 1.1E-07 40.8 7.6 59 8-82 27-86 (104)
112 cd01228 PH_BCR-related BCR (br 96.9 0.0046 1E-07 40.1 6.2 72 63-141 18-93 (96)
113 cd01227 PH_Dbs Dbs (DBL's big 96.7 0.036 7.9E-07 38.4 9.9 80 63-143 30-116 (133)
114 cd01219 PH_FGD FGD (faciogenit 96.6 0.014 2.9E-07 38.5 6.7 41 4-44 14-56 (101)
115 KOG1090|consensus 96.5 0.0013 2.9E-08 58.4 1.6 42 4-48 1646-1689(1732)
116 cd01234 PH_CADPS CADPS (Ca2+-d 96.4 0.0016 3.5E-08 42.9 1.3 16 4-19 15-30 (117)
117 cd01242 PH_ROK Rok (Rho- assoc 96.2 0.016 3.5E-07 38.7 5.3 38 5-42 17-54 (112)
118 KOG4424|consensus 96.1 0.012 2.5E-07 49.6 5.1 85 57-143 283-370 (623)
119 KOG3549|consensus 96.1 0.012 2.6E-07 46.9 4.8 79 59-144 297-388 (505)
120 PF15411 PH_10: Pleckstrin hom 96.0 0.099 2.1E-06 35.4 8.7 79 60-138 19-116 (116)
121 KOG4236|consensus 96.0 0.012 2.6E-07 49.7 4.9 76 63-143 430-524 (888)
122 KOG3543|consensus 96.0 0.0027 5.8E-08 54.1 1.0 80 59-144 478-567 (1218)
123 PF15410 PH_9: Pleckstrin homo 95.9 0.0047 1E-07 42.0 1.9 75 4-85 22-107 (119)
124 KOG1738|consensus 95.9 0.0018 3.8E-08 54.8 -0.4 38 5-45 578-615 (638)
125 KOG1739|consensus 95.6 0.0041 9E-08 51.3 0.6 66 5-82 37-102 (611)
126 cd01243 PH_MRCK MRCK (myotonic 95.3 0.054 1.2E-06 36.7 5.2 39 3-41 15-56 (122)
127 KOG3751|consensus 95.3 0.013 2.8E-07 48.9 2.6 31 4-34 329-359 (622)
128 KOG3727|consensus 95.2 0.0019 4.2E-08 54.0 -2.5 82 57-143 370-459 (664)
129 KOG0705|consensus 94.8 0.023 5E-07 48.0 2.7 35 109-143 446-480 (749)
130 KOG1451|consensus 94.7 0.055 1.2E-06 45.9 4.7 81 59-141 280-366 (812)
131 cd01255 PH_TIAM TIAM Pleckstri 94.7 0.4 8.6E-06 33.6 8.1 78 65-143 52-155 (160)
132 KOG4424|consensus 94.7 0.061 1.3E-06 45.5 4.8 82 58-143 509-596 (623)
133 KOG2070|consensus 94.6 0.1 2.2E-06 43.5 5.8 74 63-140 326-404 (661)
134 PLN02866 phospholipase D 93.9 0.061 1.3E-06 48.6 3.5 26 6-31 216-241 (1068)
135 KOG0592|consensus 93.8 0.31 6.7E-06 41.3 7.3 71 62-141 465-536 (604)
136 PF04714 BCL_N: BCL7, N-termin 93.2 0.019 4.1E-07 32.6 -0.4 22 3-24 25-46 (52)
137 cd01220 PH_CDEP Chondrocyte-de 93.1 0.51 1.1E-05 30.9 6.2 45 5-50 14-58 (99)
138 KOG1737|consensus 93.0 0.053 1.2E-06 47.7 1.7 79 58-141 89-167 (799)
139 PF15405 PH_5: Pleckstrin homo 93.0 0.2 4.3E-06 34.9 4.2 35 107-141 98-134 (135)
140 KOG0517|consensus 92.1 0.0034 7.4E-08 58.7 -6.9 86 58-143 2319-2410(2473)
141 KOG2059|consensus 90.3 0.18 3.8E-06 43.8 1.9 39 5-47 583-621 (800)
142 KOG1737|consensus 90.2 0.24 5.2E-06 43.8 2.7 38 3-41 88-125 (799)
143 KOG1170|consensus 89.9 0.011 2.3E-07 51.7 -5.6 80 59-143 15-95 (1099)
144 KOG3520|consensus 89.1 1.2 2.6E-05 41.0 6.1 54 89-143 667-722 (1167)
145 KOG1738|consensus 88.9 0.065 1.4E-06 45.7 -1.6 39 60-102 579-617 (638)
146 KOG1264|consensus 87.9 1.1 2.5E-05 39.9 5.1 55 89-143 853-911 (1267)
147 KOG3551|consensus 87.9 1.1 2.3E-05 36.6 4.6 37 107-143 235-272 (506)
148 PF08458 PH_2: Plant pleckstri 87.8 1.6 3.4E-05 29.2 4.7 37 107-144 69-105 (110)
149 KOG3531|consensus 87.4 0.56 1.2E-05 41.6 3.0 55 89-146 792-848 (1036)
150 cd01258 PH_syntrophin Syntroph 87.3 0.71 1.5E-05 30.8 2.9 24 5-28 16-39 (108)
151 PF15404 PH_4: Pleckstrin homo 86.2 0.89 1.9E-05 33.3 3.1 24 118-141 161-184 (185)
152 PF15277 Sec3-PIP2_bind: Exocy 85.7 5.6 0.00012 25.6 6.4 51 90-142 37-88 (91)
153 cd01262 PH_PDK1 3-Phosphoinosi 85.1 5.7 0.00012 25.6 6.1 63 5-82 12-75 (89)
154 KOG4095|consensus 85.1 0.29 6.4E-06 34.3 0.2 22 3-24 26-47 (165)
155 KOG0690|consensus 84.8 0.93 2E-05 36.6 2.8 23 5-27 28-51 (516)
156 PF14844 PH_BEACH: PH domain a 84.6 5.6 0.00012 26.0 6.2 67 67-136 21-103 (106)
157 PF06017 Myosin_TH1: Myosin ta 82.9 8.3 0.00018 28.3 7.2 70 62-135 65-139 (199)
158 KOG4407|consensus 82.2 0.077 1.7E-06 48.9 -4.5 91 53-143 940-1042(1973)
159 KOG3523|consensus 82.1 4.6 9.9E-05 34.9 6.0 34 106-139 553-591 (695)
160 KOG4047|consensus 79.5 1.3 2.8E-05 36.6 2.0 83 57-142 21-117 (429)
161 KOG3551|consensus 78.2 3.1 6.8E-05 34.0 3.7 87 56-142 304-401 (506)
162 KOG3723|consensus 71.3 0.72 1.6E-05 39.4 -1.5 78 6-89 752-829 (851)
163 KOG2996|consensus 69.9 22 0.00048 30.9 6.8 82 61-145 421-514 (865)
164 PF10882 bPH_5: Bacterial PH d 69.8 21 0.00044 22.9 5.5 30 107-140 69-98 (100)
165 PLN00188 enhanced disease resi 67.6 6.1 0.00013 34.8 3.2 19 8-26 23-41 (719)
166 PF14470 bPH_3: Bacterial PH d 60.2 39 0.00085 21.0 9.6 76 61-140 20-96 (96)
167 PF15406 PH_6: Pleckstrin homo 49.6 20 0.00044 24.0 2.7 32 15-48 46-77 (112)
168 KOG0689|consensus 47.4 27 0.00059 29.3 3.7 51 92-143 308-361 (448)
169 KOG4095|consensus 45.7 14 0.0003 26.1 1.5 20 59-78 28-47 (165)
170 COG4687 Uncharacterized protei 44.9 95 0.0021 20.9 6.0 65 68-136 28-94 (122)
171 PF02831 gpW: gpW; InterPro: 43.3 62 0.0013 19.7 3.9 32 115-146 27-58 (68)
172 KOG4471|consensus 41.9 1E+02 0.0022 27.1 6.2 55 89-143 78-137 (717)
173 KOG3549|consensus 41.0 39 0.00084 27.5 3.5 38 106-143 223-261 (505)
174 PF06115 DUF956: Domain of unk 40.6 1.2E+02 0.0025 20.7 6.8 68 69-143 29-99 (118)
175 PTZ00267 NIMA-related protein 39.8 55 0.0012 27.2 4.5 20 5-24 389-408 (478)
176 KOG0169|consensus 36.7 34 0.00073 30.5 2.8 84 61-146 30-126 (746)
177 KOG1264|consensus 36.4 41 0.00089 30.6 3.2 54 89-142 61-130 (1267)
178 PF15404 PH_4: Pleckstrin homo 36.1 65 0.0014 23.6 3.8 41 59-99 12-60 (185)
179 PF06713 bPH_4: Bacterial PH d 34.4 1.1E+02 0.0024 18.6 8.6 62 67-135 3-70 (74)
180 KOG3518|consensus 34.0 43 0.00094 27.1 2.8 39 105-143 393-433 (521)
181 PF12480 DUF3699: Protein of u 33.6 1.2E+02 0.0026 18.8 5.5 32 108-139 26-62 (77)
182 KOG0521|consensus 32.8 20 0.00043 32.3 0.8 38 5-45 288-325 (785)
183 PLN02958 diacylglycerol kinase 31.8 63 0.0014 27.3 3.6 25 119-143 82-106 (481)
184 KOG0931|consensus 27.7 1.3E+02 0.0028 25.6 4.6 36 108-143 486-526 (627)
185 KOG3503|consensus 27.3 60 0.0013 19.1 1.9 12 19-30 2-13 (64)
186 PHA03001 putative virion core 26.7 68 0.0015 22.1 2.4 18 11-28 54-71 (132)
187 KOG4305|consensus 26.7 57 0.0012 30.3 2.6 27 117-143 661-687 (1029)
188 COG4026 Uncharacterized protei 26.1 1.6E+02 0.0035 22.5 4.5 24 120-143 250-273 (290)
189 cd06409 PB1_MUG70 The MUG70 pr 25.7 1.7E+02 0.0037 18.6 4.0 37 109-145 1-37 (86)
190 PF14506 CppA_N: CppA N-termin 25.6 1E+02 0.0022 21.1 3.1 23 106-128 94-116 (125)
191 cd05134 RasGAP_RASA3 RASA3 (or 24.8 32 0.00069 27.4 0.6 14 58-71 297-310 (310)
192 PF06138 Chordopox_E11: Chordo 22.9 87 0.0019 21.5 2.4 18 11-28 55-72 (130)
193 PHA02819 hypothetical protein; 22.5 1.5E+02 0.0033 18.2 3.1 22 123-144 12-33 (71)
194 PF08394 Arc_trans_TRASH: Arch 22.2 88 0.0019 16.6 1.8 12 117-128 18-29 (37)
195 PF10453 NUFIP1: Nuclear fragi 22.1 1.2E+02 0.0027 17.6 2.6 21 118-140 12-32 (56)
196 PF12213 Dpoe2NT: DNA polymera 22.0 77 0.0017 19.5 1.8 19 126-144 35-53 (73)
197 cd05128 RasGAP_GAP1_like The G 21.5 34 0.00073 27.3 0.2 14 57-70 302-315 (315)
198 KOG3521|consensus 21.2 1.3E+02 0.0028 26.8 3.6 37 107-143 486-527 (846)
199 KOG2677|consensus 20.6 91 0.002 27.6 2.5 82 59-143 465-572 (922)
200 cd05394 RasGAP_RASA2 RASA2 (or 20.5 36 0.00079 27.1 0.2 14 58-71 300-313 (313)
201 PF07831 PYNP_C: Pyrimidine nu 20.4 1.6E+02 0.0035 18.0 3.1 26 118-143 48-73 (75)
202 cd01229 PH_etc2 Epithelial cel 20.0 3E+02 0.0065 18.8 5.4 54 89-142 66-127 (129)
No 1
>cd01264 PH_melted Melted pleckstrin homology (PH) domain. Melted pleckstrin homology (PH) domain. The melted protein has a C-terminal PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.90 E-value=3.5e-23 Score=136.53 Aligned_cols=87 Identities=23% Similarity=0.395 Sum_probs=74.5
Q ss_pred cceee---eeeeceEEEEEEeCCEEEEEeCCCCccCCccceeEEcCCceeeeecCC-----CCCceEEEEeCCCcEEEEE
Q psy8929 53 RNFGF---QITTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPV-----ARNFGFQITTWDSKRTILS 124 (160)
Q Consensus 53 kk~g~---~~~~WkkrwfvL~~~~L~yyk~~~~~~~~~~~g~I~L~~~~~v~~~~~-----~~~~~F~i~t~~~r~~~l~ 124 (160)
++.|+ .+++|++|||+|+++.|+||++.....+ ..|.|+|+.|..|..... .++++|+|.|++ |+|+|+
T Consensus 7 ~k~~g~~r~~K~WkrRwF~L~~~~L~y~K~~~~~~~--~~g~IdL~~~~sVk~~~~~~~~~~~~~~Fei~tp~-rt~~l~ 83 (101)
T cd01264 7 KEKKGRWRFIKRWKTRYFTLSGAQLLFQKGKSKDDP--DDCSIDLSKIRSVKAVAKKRRDRSLPKAFEIFTAD-KTYILK 83 (101)
T ss_pred eecCccceeeecceeEEEEEeCCEEEEEeccCccCC--CCceEEcccceEEeeccccccccccCcEEEEEcCC-ceEEEE
Confidence 34445 8999999999999999999998866544 159999999998887654 236999999997 999999
Q ss_pred cCCHHHHHHHHHHHHHHh
Q psy8929 125 AVTAGIRNNWMSAIKRTA 142 (160)
Q Consensus 125 a~s~~e~~~Wi~al~~~~ 142 (160)
|+|++|+++||++|+.|+
T Consensus 84 A~se~e~e~WI~~i~~a~ 101 (101)
T cd01264 84 AKDEKNAEEWLQCLNIAV 101 (101)
T ss_pred eCCHHHHHHHHHHHHhhC
Confidence 999999999999999864
No 2
>cd01251 PH_centaurin_alpha Centaurin alpha Pleckstrin homology (PH) domain. Centaurin alpha Pleckstrin homology (PH) domain. Centaurin alpha is a phophatidlyinositide binding protein consisting of an N-terminal ArfGAP domain and two PH domains. In response to growth factor activation, PI3K phosphorylates phosphatidylinositol 4,5-bisphosphate to phosphatidylinositol 3,4,5-trisphosphate. Centaurin alpha 1 is recruited to the plasma membrane following growth factor stimulation by specific binding of its PH domain to phosphatidylinositol 3,4,5-trisphosphate. Centaurin alpha 2 is constitutively bound to the plasma membrane since it binds phosphatidylinositol 4,5-bisphosphate and phosphatidylinositol 3,4,5-trisphosphate with equal affinity. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specifici
Probab=99.89 E-value=8.5e-23 Score=136.21 Aligned_cols=87 Identities=23% Similarity=0.491 Sum_probs=70.9
Q ss_pred ceeee-eeeceEEEEEEeCCEEEEEeCCCCccCCccceeEEcCCcee---eee-cCC----CCCceEEEEeCCCcEEEEE
Q psy8929 54 NFGFQ-ITTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTS---LSE-VPV----ARNFGFQITTWDSKRTILS 124 (160)
Q Consensus 54 k~g~~-~~~WkkrwfvL~~~~L~yyk~~~~~~~~~~~g~I~L~~~~~---v~~-~~~----~~~~~F~i~t~~~r~~~l~ 124 (160)
|.|+. .++|++|||||+++.|+||+++.+..+ .|.|+|+.+.. |.. .+. ...++|+|.|++ |+|+|+
T Consensus 7 K~g~~~~k~wkkRwFvL~~~~L~Yyk~~~d~~~---~G~I~L~~~~~~~~v~~~~~~~~~~~~~~~F~i~t~~-Rty~l~ 82 (103)
T cd01251 7 KTGPKHTEGFKKRWFTLDDRRLMYFKDPLDAFA---KGEVFLGSQEDGYEVREGLPPGTQGNHWYGVTLVTPE-RKFLFA 82 (103)
T ss_pred ecCCCCCCCceeEEEEEeCCEEEEECCCCCcCc---CcEEEeeccccceeEeccCCccccccccceEEEEeCC-eEEEEE
Confidence 44443 689999999999999999999988777 89999986542 322 111 233599999995 999999
Q ss_pred cCCHHHHHHHHHHHHHHhcc
Q psy8929 125 AVTAGIRNNWMSAIKRTAAM 144 (160)
Q Consensus 125 a~s~~e~~~Wi~al~~~~~~ 144 (160)
|+|++|+++||+||++++..
T Consensus 83 a~s~~e~~~Wi~ai~~v~~~ 102 (103)
T cd01251 83 CETEQDRREWIAAFQNVLSR 102 (103)
T ss_pred CCCHHHHHHHHHHHHHHhcC
Confidence 99999999999999999864
No 3
>cd01233 Unc104 Unc-104 pleckstrin homology (PH) domain. Unc-104 pleckstrin homology (PH) domain. Unc-104 is a kinesin-like protein containing an N-terminal kinesin catalytic domain, followed by a forkhead associated domain with a C-terminal PH domain. These proteins are responsible for the transport of membrane vesicles along microtubules. The mechanism involves the binding of the PH domain to phosphatidiylinositol (4,5) P2-containing liposomes.
Probab=99.88 E-value=2.1e-22 Score=133.68 Aligned_cols=85 Identities=19% Similarity=0.265 Sum_probs=73.2
Q ss_pred cceeeeeeeceEEEEEEeCCEEEEEeCCCCccCCccceeEEcCCceeeeecCC-----CCCceEEEEeCCCcEEEEEcCC
Q psy8929 53 RNFGFQITTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPV-----ARNFGFQITTWDSKRTILSAVT 127 (160)
Q Consensus 53 kk~g~~~~~WkkrwfvL~~~~L~yyk~~~~~~~~~~~g~I~L~~~~~v~~~~~-----~~~~~F~i~t~~~r~~~l~a~s 127 (160)
.|+|+..++|++|||||+++.|+||+++.+..+ .|.|+|..+. +...++ +++++|.|.+++ |+|+|+|+|
T Consensus 9 ~Kkg~~~k~WkkRwfvL~~~~L~yyk~~~~~~~---~~~I~L~~~~-v~~~~~~~~~~~~~~~F~I~t~~-rt~~~~A~s 83 (100)
T cd01233 9 NFPEETNSGWTRRFVVVRRPYLHIYRSDKDPVE---RGVINLSTAR-VEHSEDQAAMVKGPNTFAVCTKH-RGYLFQALS 83 (100)
T ss_pred EeeCCCCCCcEEEEEEEECCEEEEEccCCCccE---eeEEEecccE-EEEccchhhhcCCCcEEEEECCC-CEEEEEcCC
Confidence 455667799999999999999999999988776 8999999876 444433 368999999986 999999999
Q ss_pred HHHHHHHHHHHHHHh
Q psy8929 128 AGIRNNWMSAIKRTA 142 (160)
Q Consensus 128 ~~e~~~Wi~al~~~~ 142 (160)
++|+++||.||+..+
T Consensus 84 ~~e~~~Wi~ai~~~~ 98 (100)
T cd01233 84 DKEMIDWLYALNPLY 98 (100)
T ss_pred HHHHHHHHHHhhhhh
Confidence 999999999998764
No 4
>cd01260 PH_CNK Connector enhancer of KSR (Kinase suppressor of ras) (CNK) pleckstrin homology (PH) domain. Connector enhancer of KSR (Kinase suppressor of ras) (CNK) pleckstrin homology (PH) domain. CNK is believed to regulate the activity and the subcellular localization of RAS activated RAF. CNK is composed of N-terminal SAM and PDZ domains along with a central or C-terminal PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskelet
Probab=99.88 E-value=4.2e-22 Score=131.20 Aligned_cols=81 Identities=25% Similarity=0.516 Sum_probs=71.6
Q ss_pred eeeeceEEEEEEeCCEEEEEeCCCCccCCccceeEEcCCceeeeecCCCCCceEEEEeCCCcEEEEEcCCHHHHHHHHHH
Q psy8929 58 QITTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPVARNFGFQITTWDSKRTILSAVTAGIRNNWMSA 137 (160)
Q Consensus 58 ~~~~WkkrwfvL~~~~L~yyk~~~~~~~~~~~g~I~L~~~~~v~~~~~~~~~~F~i~t~~~r~~~l~a~s~~e~~~Wi~a 137 (160)
..+.|++|||||+++.|+||+++.+..+ .|.|+|++++.....+..++++|+|.+++.++|+|+|+|++|+++||.|
T Consensus 16 ~~k~WkkrwfvL~~~~L~yyk~~~~~~~---~~~I~L~~~~v~~~~~~~k~~~F~I~~~~~~~~~f~a~s~~e~~~Wi~a 92 (96)
T cd01260 16 MGQKWARRWFVLKGTTLYWYRSKQDEKA---EGLIFLSGFTIESAKEVKKKYAFKVCHPVYKSFYFAAETLDDLSQWVNH 92 (96)
T ss_pred cccCceeEEEEEECCEEEEECCCCCCcc---ceEEEccCCEEEEchhcCCceEEEECCCCCcEEEEEeCCHHHHHHHHHH
Confidence 5679999999999999999999998776 8999999997443334468899999998769999999999999999999
Q ss_pred HHHH
Q psy8929 138 IKRT 141 (160)
Q Consensus 138 l~~~ 141 (160)
|++|
T Consensus 93 i~~~ 96 (96)
T cd01260 93 LITA 96 (96)
T ss_pred HHhC
Confidence 9875
No 5
>cd01265 PH_PARIS-1 PARIS-1 pleckstrin homology (PH) domain. PARIS-1 pleckstrin homology (PH) domain. PARIS-1 contains a PH domain and a TBC-type GTPase catalytic domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.87 E-value=8.4e-22 Score=129.59 Aligned_cols=79 Identities=24% Similarity=0.468 Sum_probs=68.1
Q ss_pred eeeeceEEEEEEeC--CEEEEEeCCCCccCCccceeEEcCCceeeeecCCCCCceEEEEeCCCcEEEEEcCCHHHHHHHH
Q psy8929 58 QITTWTKHWFVLRG--CSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPVARNFGFQITTWDSKRTILSAVTAGIRNNWM 135 (160)
Q Consensus 58 ~~~~WkkrwfvL~~--~~L~yyk~~~~~~~~~~~g~I~L~~~~~v~~~~~~~~~~F~i~t~~~r~~~l~a~s~~e~~~Wi 135 (160)
..++|++|||||++ +.|+||+++.+..+ .|.|+|.++..+.. +...++.|+|+|++ |+|+|+|+|++|+++||
T Consensus 13 ~~K~WkkRWFvL~~~~~~L~Yyk~~~d~~p---~G~I~L~~~~~~~~-~~~~~~~F~i~t~~-r~y~l~A~s~~e~~~Wi 87 (95)
T cd01265 13 PLRGRRSRWFALDDRTCYLYYYKDSQDAKP---LGRVDLSGAAFTYD-PREEKGRFEIHSNN-EVIALKASSDKQMNYWL 87 (95)
T ss_pred CCcCceeEEEEEcCCCcEEEEECCCCcccc---cceEECCccEEEcC-CCCCCCEEEEEcCC-cEEEEECCCHHHHHHHH
Confidence 47899999999984 58999999998777 99999999874433 33357899999985 99999999999999999
Q ss_pred HHHHHH
Q psy8929 136 SAIKRT 141 (160)
Q Consensus 136 ~al~~~ 141 (160)
+||+.+
T Consensus 88 ~al~~~ 93 (95)
T cd01265 88 QALQSK 93 (95)
T ss_pred HHHHhh
Confidence 999875
No 6
>cd01238 PH_Tec Tec pleckstrin homology (PH) domain. Tec pleckstrin homology (PH) domain. Proteins in the Tec family of cytoplasmic protein tyrosine kinases that includes Bruton's tyrosine kinase (BTK), BMX, IL2-inducible T-cell kinase (Itk) and Tec. These proteins generally have an N-terminal PH domain, followed by a Tek homology (TH) domain, a SH3 domain, a SH2 domain and a kinase domain. Tec PH domains tether these proteins to membranes following the activation of PI3K and its subsequent phosphorylation of phosphoinositides. The importance of PH domain membrane anchoring is confirmed by the discovery of a mutation of a critical arginine residue in the BTK PH domain, which causes X-linked agammaglobulinemia (XLA) in humans and a related disorder is mice. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few dis
Probab=99.87 E-value=1e-21 Score=131.68 Aligned_cols=81 Identities=22% Similarity=0.409 Sum_probs=68.6
Q ss_pred eeeeceEEEEEEeCCEEEEEeCCCCccCCccceeEEcCCceeeeecCC--------CCCceEEEEeCCCcEEEEEcCCHH
Q psy8929 58 QITTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPV--------ARNFGFQITTWDSKRTILSAVTAG 129 (160)
Q Consensus 58 ~~~~WkkrwfvL~~~~L~yyk~~~~~~~~~~~g~I~L~~~~~v~~~~~--------~~~~~F~i~t~~~r~~~l~a~s~~ 129 (160)
..++|++|||||+++.|+||+++.+.. ..+.|.|+|..+..++.+.+ .+.++|+|++++ ++|||.|+|++
T Consensus 17 ~~~nwKkRwFvL~~~~L~Yyk~~~~~~-~~~kG~I~L~~~~~ve~~~~~~~~~~~~~~~~~F~i~t~~-r~~yl~A~s~~ 94 (106)
T cd01238 17 SPLNYKERLFVLTKSKLSYYEGDFEKR-GSKKGSIDLSKIKCVETVKPEKNPPIPERFKYPFQVVHDE-GTLYVFAPTEE 94 (106)
T ss_pred CCCCceeEEEEEcCCEEEEECCCcccc-cCcceeEECCcceEEEEecCCcCcccccccCccEEEEeCC-CeEEEEcCCHH
Confidence 446999999999999999999987641 11289999999988776543 247899999985 89999999999
Q ss_pred HHHHHHHHHHH
Q psy8929 130 IRNNWMSAIKR 140 (160)
Q Consensus 130 e~~~Wi~al~~ 140 (160)
|+++||+||++
T Consensus 95 er~~WI~ai~~ 105 (106)
T cd01238 95 LRKRWIKALKQ 105 (106)
T ss_pred HHHHHHHHHHh
Confidence 99999999986
No 7
>cd01247 PH_GPBP Goodpasture antigen binding protein (GPBP) Pleckstrin homology (PH) domain. Goodpasture antigen binding protein (GPBP) Pleckstrin homology (PH) domain. The GPBP protein is a kinase that phosphorylates an N-terminal region of the alpha 3 chain of type IV collagen , which is commonly known as the goodpasture antigen. It has has an N-terminal PH domain and a C-terminal START domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cyt
Probab=99.87 E-value=2.6e-21 Score=126.17 Aligned_cols=85 Identities=21% Similarity=0.337 Sum_probs=71.9
Q ss_pred cceeeeeeeceEEEEEEeCCEEEEEeCCCCccCCccceeEEcCCceeeeecCCCCCceEEEEeCCCcEEEEEcCCHHHHH
Q psy8929 53 RNFGFQITTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPVARNFGFQITTWDSKRTILSAVTAGIRN 132 (160)
Q Consensus 53 kk~g~~~~~WkkrwfvL~~~~L~yyk~~~~~~~~~~~g~I~L~~~~~v~~~~~~~~~~F~i~t~~~r~~~l~a~s~~e~~ 132 (160)
.|.|..+++|++|||||+++.|.||+++.+... .+.|.|+|..+..+. . +.+++.|.|.+.++++|+|.|+|++|++
T Consensus 6 ~K~~~~~k~Wk~RwFvL~~g~L~Yyk~~~~~~~-~~~G~I~L~~~~i~~-~-~~~~~~F~i~~~~~r~~~L~A~s~~e~~ 82 (91)
T cd01247 6 SKWTNYINGWQDRYFVLKEGNLSYYKSEAEKSH-GCRGSIFLKKAIIAA-H-EFDENRFDISVNENVVWYLRAENSQSRL 82 (91)
T ss_pred EEeccccCCCceEEEEEECCEEEEEecCccCcC-CCcEEEECcccEEEc-C-CCCCCEEEEEeCCCeEEEEEeCCHHHHH
Confidence 577788999999999999999999999887542 238999999987443 2 3457899998766699999999999999
Q ss_pred HHHHHHHH
Q psy8929 133 NWMSAIKR 140 (160)
Q Consensus 133 ~Wi~al~~ 140 (160)
.||+||++
T Consensus 83 ~Wi~al~~ 90 (91)
T cd01247 83 LWMDSVVR 90 (91)
T ss_pred HHHHHHhh
Confidence 99999985
No 8
>cd01244 PH_RasGAP_CG9209 RAS_GTPase activating protein (GAP)_CG9209 pleckstrin homology (PH) domain. RAS_GTPase activating protein (GAP)_CG9209 pleckstrin homology (PH) domain. This protein consists of two C2 domains, followed by a RasGAP domain, a PH domain and a BTK domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.86 E-value=2.5e-21 Score=127.52 Aligned_cols=77 Identities=14% Similarity=0.250 Sum_probs=68.7
Q ss_pred eeceEEEEEEeCCEEEEEeCCCCccCCccceeEEcCCceeeeecCC---CCCceEEEEeCCCcEEEEEcCCHHHHHHHHH
Q psy8929 60 TTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPV---ARNFGFQITTWDSKRTILSAVTAGIRNNWMS 136 (160)
Q Consensus 60 ~~WkkrwfvL~~~~L~yyk~~~~~~~~~~~g~I~L~~~~~v~~~~~---~~~~~F~i~t~~~r~~~l~a~s~~e~~~Wi~ 136 (160)
.+||+|||+|++..|+||+++.... .|.|+|+.+..|+.+.. ..+++|+|++++ ++|||.|+|++|+++||.
T Consensus 19 ~n~KkRwF~Lt~~~L~Y~k~~~~~~----~g~I~L~~i~~ve~v~~~~~~~~~~fqivt~~-r~~yi~a~s~~E~~~Wi~ 93 (98)
T cd01244 19 LHFKKRYFQLTTTHLSWAKDVQCKK----SALIKLAAIKGTEPLSDKSFVNVDIITIVCED-DTMQLQFEAPVEATDWLN 93 (98)
T ss_pred cCCceeEEEECCCEEEEECCCCCce----eeeEEccceEEEEEcCCcccCCCceEEEEeCC-CeEEEECCCHHHHHHHHH
Confidence 7999999999999999999887433 79999999998887765 456899999996 899999999999999999
Q ss_pred HHHHH
Q psy8929 137 AIKRT 141 (160)
Q Consensus 137 al~~~ 141 (160)
||+++
T Consensus 94 al~k~ 98 (98)
T cd01244 94 ALEKQ 98 (98)
T ss_pred HHhcC
Confidence 99863
No 9
>cd01236 PH_outspread Outspread Pleckstrin homology (PH) domain. Outspread Pleckstrin homology (PH) domain. Outspread contains two PH domains and a C-terminal coiled-coil region. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.86 E-value=5.5e-21 Score=127.05 Aligned_cols=80 Identities=23% Similarity=0.419 Sum_probs=67.4
Q ss_pred eeeeeceEEEEEEe-CCEEEEEeCCC-CccCCccceeEEcCCceeeeecCC--CCCceEEEEeCCCcEEEEEcCCHHHHH
Q psy8929 57 FQITTWTKHWFVLR-GCSLLYYRDPK-AEESGVLDGVVALNNVTSLSEVPV--ARNFGFQITTWDSKRTILSAVTAGIRN 132 (160)
Q Consensus 57 ~~~~~WkkrwfvL~-~~~L~yyk~~~-~~~~~~~~g~I~L~~~~~v~~~~~--~~~~~F~i~t~~~r~~~l~a~s~~e~~ 132 (160)
...++||+|||||+ ++.|+||++.. +..+ +|.|+|+.|..|..... +++++|.|+|++ |+|||.|+|++|++
T Consensus 19 ~~~K~WkrRWFvL~~~~~L~y~~d~~~~~~p---~G~IdL~~~~~V~~~~~~~~~~~~f~I~tp~-R~f~l~Aete~E~~ 94 (104)
T cd01236 19 HRSKRWQRRWFILYDHGLLTYALDEMPTTLP---QGTIDMNQCTDVVDAEARTGQKFSICILTPD-KEHFIKAETKEEIS 94 (104)
T ss_pred eeeccccceEEEEeCCCEEEEeeCCCCCccc---ceEEEccceEEEeecccccCCccEEEEECCC-ceEEEEeCCHHHHH
Confidence 46799999999998 57888887664 4454 89999999998776543 456899999996 99999999999999
Q ss_pred HHHHHHHH
Q psy8929 133 NWMSAIKR 140 (160)
Q Consensus 133 ~Wi~al~~ 140 (160)
+||++|..
T Consensus 95 ~Wi~~l~~ 102 (104)
T cd01236 95 WWLNMLMV 102 (104)
T ss_pred HHHHHHHh
Confidence 99999975
No 10
>cd01235 PH_SETbf Set binding factor Pleckstrin Homology (PH) domain. Set binding factor Pleckstrin Homology (PH) domain. Set binding factor is a myotubularin-related pseudo-phosphatase consisting of a Denn domain, a Gram domain, an inactive phosphatase domain, a SID motif and a C-terminal PH domain. Its PH domain is predicted to bind lipids based upon its ability to respond to phosphatidylinositol 3-kinase .
Probab=99.85 E-value=6.4e-21 Score=126.45 Aligned_cols=86 Identities=23% Similarity=0.383 Sum_probs=72.6
Q ss_pred cceeeeeeeceEEEEEEeC--CEEEEEeCCCCccCCccceeEEcCCceeeeecCC--------CCCceEEEEeCCCcEEE
Q psy8929 53 RNFGFQITTWTKHWFVLRG--CSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPV--------ARNFGFQITTWDSKRTI 122 (160)
Q Consensus 53 kk~g~~~~~WkkrwfvL~~--~~L~yyk~~~~~~~~~~~g~I~L~~~~~v~~~~~--------~~~~~F~i~t~~~r~~~ 122 (160)
.|+|...++|++|||||.+ +.|.||+++.+..+ .|.|+|..+..+..... .+.+.|.|.+++ |+|+
T Consensus 6 ~K~g~~~k~WkkRwFvL~~~~~~L~Yy~~~~~~~~---~g~I~L~~~~~v~~~~~~~~~~~~~~~~~~f~i~t~~-r~~~ 81 (101)
T cd01235 6 YKRGALLKGWKPRWFVLDPDKHQLRYYDDFEDTAE---KGCIDLAEVKSVNLAQPGMGAPKHTSRKGFFDLKTSK-RTYN 81 (101)
T ss_pred EEcCCCCCCccceEEEEECCCCEEEEecCCCCCcc---ceEEEcceeEEEeecCCCCCCCCCCCCceEEEEEeCC-ceEE
Confidence 4666788999999999994 59999999988777 89999999887664321 245779998875 9999
Q ss_pred EEcCCHHHHHHHHHHHHHHh
Q psy8929 123 LSAVTAGIRNNWMSAIKRTA 142 (160)
Q Consensus 123 l~a~s~~e~~~Wi~al~~~~ 142 (160)
|+|+|++|+.+||.||+++|
T Consensus 82 ~~a~s~~e~~~Wi~ai~~~i 101 (101)
T cd01235 82 FLAENINEAQRWKEKIQQCI 101 (101)
T ss_pred EECCCHHHHHHHHHHHHhhC
Confidence 99999999999999999875
No 11
>cd01252 PH_cytohesin Cytohesin Pleckstrin homology (PH) domain. Cytohesin Pleckstrin homology (PH) domain. Cytohesin is an ARF-Guanine nucleotide Exchange Factor (GEF), which has a Sec7-type Arf-GEFdomain and a pleckstrin homology domain. It specifically binds phosphatidylinositol-3,4,5-trisphosphate (PtdIns(3,4, 5)P3) via its PH domain and it acts as a PI 3-kinase effector mediating biological responses such as cell adhesion and membrane trafficking. PH domains are only found in eukaryotes. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.84 E-value=2.6e-20 Score=128.31 Aligned_cols=87 Identities=25% Similarity=0.546 Sum_probs=74.8
Q ss_pred cceeeeeeeceEEEEEEeCCEEEEEeCCCCccCCccceeEEcCCceeeeecC-CCCCceEEEEeCCC-------------
Q psy8929 53 RNFGFQITTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVP-VARNFGFQITTWDS------------- 118 (160)
Q Consensus 53 kk~g~~~~~WkkrwfvL~~~~L~yyk~~~~~~~~~~~g~I~L~~~~~v~~~~-~~~~~~F~i~t~~~------------- 118 (160)
.|+|...+.|++|||||+++.|+||+++.+..+ .|.|+|.++. |...+ ..++++|+|.++++
T Consensus 7 ~K~~~~~~~WkkRwfvL~~~~L~yyk~~~~~~~---~g~I~L~~~~-v~~~~~~~~~~~F~i~~~~~~~~i~~~~~~~~~ 82 (125)
T cd01252 7 LKQGGRVKTWKRRWFILTDNCLYYFEYTTDKEP---RGIIPLENVS-IREVEDPSKPFCFELFSPSDKQQIKACKTESDG 82 (125)
T ss_pred EEeCCCCCCeEeEEEEEECCEEEEEcCCCCCCc---eEEEECCCcE-EEEcccCCCCeeEEEECCccccccccccccccc
Confidence 455667799999999999999999999988777 8999999887 55443 35789999987664
Q ss_pred -------cEEEEEcCCHHHHHHHHHHHHHHhc
Q psy8929 119 -------KRTILSAVTAGIRNNWMSAIKRTAA 143 (160)
Q Consensus 119 -------r~~~l~a~s~~e~~~Wi~al~~~~~ 143 (160)
++|+|+|+|++|+.+||+||+.++.
T Consensus 83 ~~~~~~~~~~~~~A~s~~e~~~Wi~al~~~~~ 114 (125)
T cd01252 83 RVVEGNHSVYRISAANDEEMDEWIKSIKASIS 114 (125)
T ss_pred cccccCceEEEEECCCHHHHHHHHHHHHHHHh
Confidence 6899999999999999999999886
No 12
>cd01257 PH_IRS Insulin receptor substrate (IRS) pleckstrin homology (PH) domain. Insulin receptor substrate (IRS) pleckstrin homology (PH) domain. PH domains are only found in eukaryotes, and are often involved in targeting proteins to the plasma membrane via lipid binding. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes. The IRS PH domain targets IRS molecules to the plasma membrane, usually in response to insulin stimulation.
Probab=99.84 E-value=3.8e-20 Score=122.56 Aligned_cols=81 Identities=20% Similarity=0.291 Sum_probs=68.5
Q ss_pred eeeceEEEEEEeCC------EEEEEeCCCCccC--CccceeEEcCCceeeeecCC-CCCceEEEEeCCCcEEEEEcCCHH
Q psy8929 59 ITTWTKHWFVLRGC------SLLYYRDPKAEES--GVLDGVVALNNVTSLSEVPV-ARNFGFQITTWDSKRTILSAVTAG 129 (160)
Q Consensus 59 ~~~WkkrwfvL~~~------~L~yyk~~~~~~~--~~~~g~I~L~~~~~v~~~~~-~~~~~F~i~t~~~r~~~l~a~s~~ 129 (160)
.++|++|||||+++ .|.||+++..... ..+.|+|+|.+|..|...++ .++++|.|.|++ ++|+|.|+|++
T Consensus 11 ~K~~kkRwFVLr~~~~~~p~~Leyyk~ek~~~~~~~~p~~vI~L~~c~~v~~~~d~k~~~~f~i~t~d-r~f~l~aese~ 89 (101)
T cd01257 11 QKSMHKRFFVLRAESSGGPARLEYYENEKKFLQKGSAPKRVIPLESCFNINKRADAKHRHLIALYTRD-EYFAVAAENEA 89 (101)
T ss_pred ecCcEeEEEEEecCCCCCCceEEEECChhhccccCCCceEEEEccceEEEeeccccccCeEEEEEeCC-ceEEEEeCCHH
Confidence 38999999999987 7999999875210 12389999999998877655 346999999997 89999999999
Q ss_pred HHHHHHHHHHH
Q psy8929 130 IRNNWMSAIKR 140 (160)
Q Consensus 130 e~~~Wi~al~~ 140 (160)
|+++||.+|..
T Consensus 90 E~~~Wi~~i~~ 100 (101)
T cd01257 90 EQDSWYQALLE 100 (101)
T ss_pred HHHHHHHHHhh
Confidence 99999999964
No 13
>cd01245 PH_RasGAP_CG5898 RAS GTPase-activating protein (GAP) CG5898 Pleckstrin homology (PH) domain. RAS GTPase-activating protein (GAP) CG5898 Pleckstrin homology (PH) domain. This protein has a domain architecture of SH2-SH3-SH2-PH-C2-Ras_GAP. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.82 E-value=6.8e-20 Score=120.42 Aligned_cols=82 Identities=18% Similarity=0.252 Sum_probs=71.5
Q ss_pred ceeee-eeeceEEEEEEeC----CEEEEEeCCCCccCCccceeEEcCCceeeeecCC---CCCceEEEEeCCC-cEEEEE
Q psy8929 54 NFGFQ-ITTWTKHWFVLRG----CSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPV---ARNFGFQITTWDS-KRTILS 124 (160)
Q Consensus 54 k~g~~-~~~WkkrwfvL~~----~~L~yyk~~~~~~~~~~~g~I~L~~~~~v~~~~~---~~~~~F~i~t~~~-r~~~l~ 124 (160)
|.|+. .+.||+|||+|.+ ++|+||++..+.++ +|.|+|..+. |.++.+ +++|||+|.++.. .+|+++
T Consensus 7 K~g~~~~K~wK~rwF~l~~~~s~~~l~yf~~~~~~~p---~gli~l~~~~-V~~v~ds~~~r~~cFel~~~~~~~~y~~~ 82 (98)
T cd01245 7 KRTKSVTKLWKTLYFALILDGSRSHESLLSSPKKTKP---IGLIDLSDAY-LYPVHDSLFGRPNCFQIVERALPTVYYSC 82 (98)
T ss_pred cCCCCcccccceeEEEEecCCCCceEEEEcCCCCCCc---cceeeccccE-EEEccccccCCCeEEEEecCCCCeEEEEe
Confidence 44445 8999999999986 99999999999887 8999999994 777655 6889999999864 599999
Q ss_pred cCCHHHHHHHHHHHHH
Q psy8929 125 AVTAGIRNNWMSAIKR 140 (160)
Q Consensus 125 a~s~~e~~~Wi~al~~ 140 (160)
|++ +|+++||++|+.
T Consensus 83 a~~-~er~~Wi~~l~~ 97 (98)
T cd01245 83 RSS-EERDKWIESLQA 97 (98)
T ss_pred CCH-HHHHHHHHHHhc
Confidence 999 999999999986
No 14
>cd01266 PH_Gab Gab (Grb2-associated binder) pleckstrin homology (PH) domain. Gab (Grb2-associated binder) pleckstrin homology (PH) domain. The Gab subfamily includes several Gab proteins, Drosophila DOS and C. elegans SOC-1. They are scaffolding adaptor proteins, which possess N-terminal PH domains and a C-terminus with proline-rich regions and multiple phosphorylation sites. Following activation of growth factor receptors, Gab proteins are tyrosine phosphorylated and activate PI3K, which generates 3-phosphoinositide lipids. By binding to these lipids via the PH domain, Gab proteins remain in proximity to the receptor, leading to further signaling. While not all Gab proteins depend on the PH domain for recruitment, it is required for Gab activity. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display str
Probab=99.81 E-value=2.5e-19 Score=120.50 Aligned_cols=79 Identities=23% Similarity=0.392 Sum_probs=66.2
Q ss_pred eeeceEEEEEEeCCE-------EEEEeCCCCccCCccceeEEcCCceeeeecC---C---CCCceEEEEeCCCcEEEEEc
Q psy8929 59 ITTWTKHWFVLRGCS-------LLYYRDPKAEESGVLDGVVALNNVTSLSEVP---V---ARNFGFQITTWDSKRTILSA 125 (160)
Q Consensus 59 ~~~WkkrwfvL~~~~-------L~yyk~~~~~~~~~~~g~I~L~~~~~v~~~~---~---~~~~~F~i~t~~~r~~~l~a 125 (160)
.++|++|||||+++. |+||+++.+..+ .|.|+|+.+..+.... . ...+.|.|.+++ |+|+|.|
T Consensus 16 ~~~WkrRwFvL~~~~l~~~~~~L~Yyk~~~~~k~---~g~I~L~~~~~v~~~~~~~~~~~~~~~~f~i~t~~-r~y~l~A 91 (108)
T cd01266 16 RTKWVRRYFVLHCGDRERNLFALEYYKTSRKFKL---EFVIDLESCSQVDPGLLCTAGNCIFGYGFDIETIV-RDLYLVA 91 (108)
T ss_pred ccCcEEEEEEEeccccCCCcceEEEECCCCCCcc---ceEEECCccEEEcccccccccCcccceEEEEEeCC-ccEEEEE
Confidence 469999999999876 599999988777 8999999988654311 1 235679999985 9999999
Q ss_pred CCHHHHHHHHHHHHHH
Q psy8929 126 VTAGIRNNWMSAIKRT 141 (160)
Q Consensus 126 ~s~~e~~~Wi~al~~~ 141 (160)
+|++|+++||.+|++.
T Consensus 92 ~s~ee~~~Wi~~I~~~ 107 (108)
T cd01266 92 KNEEEMTLWVNCICKL 107 (108)
T ss_pred CCHHHHHHHHHHHHhh
Confidence 9999999999999874
No 15
>cd01246 PH_oxysterol_bp Oxysterol binding protein (OSBP) Pleckstrin homology (PH) domain. Oxysterol binding protein (OSBP) Pleckstrin homology (PH) domain. Oxysterol binding proteins are a multigene family that is conserved in yeast, flies, worms, mammals and plants. They all contain a C-terminal oxysterol binding domain, and most contain an N-terminal PH domain. OSBP PH domains bind to membrane phosphoinositides and thus likely play an important role in intracellular targeting. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.80 E-value=8e-19 Score=113.85 Aligned_cols=83 Identities=27% Similarity=0.484 Sum_probs=71.0
Q ss_pred ceeeeeeeceEEEEEEeCCEEEEEeCCCCc--cCCccceeEEcCCceeeeecCCCCCceEEEEeCCCcEEEEEcCCHHHH
Q psy8929 54 NFGFQITTWTKHWFVLRGCSLLYYRDPKAE--ESGVLDGVVALNNVTSLSEVPVARNFGFQITTWDSKRTILSAVTAGIR 131 (160)
Q Consensus 54 k~g~~~~~WkkrwfvL~~~~L~yyk~~~~~--~~~~~~g~I~L~~~~~v~~~~~~~~~~F~i~t~~~r~~~l~a~s~~e~ 131 (160)
|++...+.|++|||+|+++.|+||+++.+. .+ .|.|+|.++. +.. +...+++|+|.++++++|+|+|+|++|+
T Consensus 7 k~~~~~~~W~~r~~vl~~~~L~~~~~~~~~~~~~---~~~i~l~~~~-~~~-~~~~~~~F~i~~~~~~~~~~~a~s~~e~ 81 (91)
T cd01246 7 KWTNYLKGWQKRWFVLDNGLLSYYKNKSSMRGKP---RGTILLSGAV-ISE-DDSDDKCFTIDTGGDKTLHLRANSEEER 81 (91)
T ss_pred EecccCCCceeeEEEEECCEEEEEecCccCCCCc---eEEEEeceEE-EEE-CCCCCcEEEEEcCCCCEEEEECCCHHHH
Confidence 445566899999999999999999999876 44 8999999987 443 2345899999998779999999999999
Q ss_pred HHHHHHHHHH
Q psy8929 132 NNWMSAIKRT 141 (160)
Q Consensus 132 ~~Wi~al~~~ 141 (160)
.+||.||+.|
T Consensus 82 ~~Wi~al~~a 91 (91)
T cd01246 82 QRWVDALELA 91 (91)
T ss_pred HHHHHHHHhC
Confidence 9999999874
No 16
>cd01250 PH_centaurin Centaurin Pleckstrin homology (PH) domain. Centaurin Pleckstrin homology (PH) domain. Centaurin beta and gamma consist of a PH domain, an ArfGAP domain and three ankyrin repeats. Centaurain gamma also has an N-terminal Ras homology domain. Centaurin alpha has a different domain architecture and its PH domain is in a different subfamily. Centaurin can bind to phosphatidlyinositol (3,4,5)P3. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.78 E-value=2.2e-18 Score=112.36 Aligned_cols=78 Identities=27% Similarity=0.462 Sum_probs=66.7
Q ss_pred eeeceEEEEEEeCCEEEEEeCCCC--ccCCccceeEEcCCceeeeecCCC--CCceEEEEeCCCcEEEEEcCCHHHHHHH
Q psy8929 59 ITTWTKHWFVLRGCSLLYYRDPKA--EESGVLDGVVALNNVTSLSEVPVA--RNFGFQITTWDSKRTILSAVTAGIRNNW 134 (160)
Q Consensus 59 ~~~WkkrwfvL~~~~L~yyk~~~~--~~~~~~~g~I~L~~~~~v~~~~~~--~~~~F~i~t~~~r~~~l~a~s~~e~~~W 134 (160)
.+.|++|||+|+++.|.||+++.+ ..+ .+.|+|..+. +...+.. ++++|+|.+++ ++|+|+|+|++|+++|
T Consensus 13 ~~~W~kr~~~L~~~~l~~y~~~~~~~~~~---~~~i~l~~~~-v~~~~~~~~~~~~f~i~~~~-~~~~f~a~s~~~~~~W 87 (94)
T cd01250 13 NKEWKKRWFVLKNGQLTYHHRLKDYDNAH---VKEIDLRRCT-VRHNGKQPDRRFCFEVISPT-KTWHFQADSEEERDDW 87 (94)
T ss_pred CCCceEEEEEEeCCeEEEEcCCccccccc---ceEEeccceE-EecCccccCCceEEEEEcCC-cEEEEECCCHHHHHHH
Confidence 688999999999999999999876 333 6899999886 4444442 78999999987 9999999999999999
Q ss_pred HHHHHHH
Q psy8929 135 MSAIKRT 141 (160)
Q Consensus 135 i~al~~~ 141 (160)
|.||+++
T Consensus 88 i~al~~~ 94 (94)
T cd01250 88 ISAIQES 94 (94)
T ss_pred HHHHhcC
Confidence 9999863
No 17
>cd01263 PH_anillin Anillin Pleckstrin homology (PH) domain. Anillin Pleckstrin homology (PH) domain. Anillin is an actin binding protein involved in cytokinesis. It has a C-terminal PH domain, which has been shown to be necessary, but not sufficient for targetting of anillin to ectopic septin containing foci . PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.75 E-value=6.6e-18 Score=115.12 Aligned_cols=84 Identities=29% Similarity=0.575 Sum_probs=65.8
Q ss_pred eeeeceEEEEEEeCCEEEEEeCCCCccCCccceeEEcCCceeeee--cC---CCCCceEEEEeC--CC------------
Q psy8929 58 QITTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSE--VP---VARNFGFQITTW--DS------------ 118 (160)
Q Consensus 58 ~~~~WkkrwfvL~~~~L~yyk~~~~~~~~~~~g~I~L~~~~~v~~--~~---~~~~~~F~i~t~--~~------------ 118 (160)
.+++|++|||||+++.|+||+.+.+.....+.|.|+|.+|..... .+ ..+++.|.|... ..
T Consensus 15 ~~k~W~RRWFvL~g~~L~y~k~p~d~~~~~Plg~I~L~~c~~~~v~~~~r~~c~Rp~tF~i~~~~~~~~~~~~~~~~~~~ 94 (122)
T cd01263 15 GFGAWHRRWCALEGGEIKYWKYPDDEKRKGPTGLIDLSTCTSSEGASAVRDICARPNTFHLDVWRPKMETDDETLVSQCR 94 (122)
T ss_pred CCCCceEEEEEEeCCEEEEEcCCCccccCCceEEEEhhhCcccccccCChhhcCCCCeEEEEEecccccccccceeeccC
Confidence 568999999999999999999888743234499999999995333 11 168999999632 10
Q ss_pred ----c-EEEEEcCCHHHHHHHHHHHHHH
Q psy8929 119 ----K-RTILSAVTAGIRNNWMSAIKRT 141 (160)
Q Consensus 119 ----r-~~~l~a~s~~e~~~Wi~al~~~ 141 (160)
+ .++|+|||++|+++||.||+++
T Consensus 95 ~~~~r~~~~lsaDt~eer~~W~~ain~~ 122 (122)
T cd01263 95 RGIERLRVMLSADTKEERQTWLSLLNST 122 (122)
T ss_pred CceeEEEEEEecCCHHHHHHHHHHHhcC
Confidence 1 2679999999999999999864
No 18
>cd01253 PH_beta_spectrin Beta-spectrin pleckstrin homology (PH) domain. Beta-spectrin pleckstrin homology (PH) domain. Beta spectrin binds actin and functions as a major component of the cytoskeleton underlying cellular membranes. Beta spectrin consists of multiple spectrin repeats followed by a PH domain, which binds to Inositol-1,4,5-Trisphosphate. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. PH domains are often involved in targeting proteins to the plasma membrane via lipid binding. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.72 E-value=8e-17 Score=107.41 Aligned_cols=81 Identities=22% Similarity=0.371 Sum_probs=65.4
Q ss_pred eeeeceEEEEEEeCCEEEEEeCCCCccCCccce--eEEcCCceeeeecCC--CCCceEEEEeCCCcEEEEEcCCHHHHHH
Q psy8929 58 QITTWTKHWFVLRGCSLLYYRDPKAEESGVLDG--VVALNNVTSLSEVPV--ARNFGFQITTWDSKRTILSAVTAGIRNN 133 (160)
Q Consensus 58 ~~~~WkkrwfvL~~~~L~yyk~~~~~~~~~~~g--~I~L~~~~~v~~~~~--~~~~~F~i~t~~~r~~~l~a~s~~e~~~ 133 (160)
..+.|++|||+|+++.|+||+++...... ..+ .|+|.++. +...++ .++++|.|.++++++|+|+|++++++..
T Consensus 19 ~~~~Wk~r~~vL~~~~L~~ykd~~~~~~~-~~~~~~i~l~~~~-i~~~~~~~k~~~~F~l~~~~~~~~~f~a~s~e~~~~ 96 (104)
T cd01253 19 SNRSWDNVYGVLCGQSLSFYKDEKMAAEN-VHGEPPVDLTGAQ-CEVASDYTKKKHVFRLRLPDGAEFLFQAPDEEEMSS 96 (104)
T ss_pred CCCCcceEEEEEeCCEEEEEecCcccccC-CCCCCcEeccCCE-EEecCCcccCceEEEEEecCCCEEEEECCCHHHHHH
Confidence 46899999999999999999988653211 133 78887766 444433 5789999998888999999999999999
Q ss_pred HHHHHHH
Q psy8929 134 WMSAIKR 140 (160)
Q Consensus 134 Wi~al~~ 140 (160)
||.+|+.
T Consensus 97 Wi~aL~~ 103 (104)
T cd01253 97 WVRALKS 103 (104)
T ss_pred HHHHHhc
Confidence 9999975
No 19
>cd01241 PH_Akt Akt pleckstrin homology (PH) domain. Akt pleckstrin homology (PH) domain. Akt (Protein Kinase B (PKB)) is a phosphatidylinositol 3'-kinase (PI3K)-dependent Ser/Thr kinase. The PH domain recruits Akt to the plasma membrane by binding to phosphoinositides (PtdIns-3,4-P2) and is required for activation. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.72 E-value=6.5e-17 Score=107.61 Aligned_cols=85 Identities=24% Similarity=0.413 Sum_probs=62.2
Q ss_pred cceeeeeeeceEEEEEEe-CCEEEEEeCCCCccCCccceeEEcCCcee----eeecCCCCCceEEEEeCC-----CcEEE
Q psy8929 53 RNFGFQITTWTKHWFVLR-GCSLLYYRDPKAEESGVLDGVVALNNVTS----LSEVPVARNFGFQITTWD-----SKRTI 122 (160)
Q Consensus 53 kk~g~~~~~WkkrwfvL~-~~~L~yyk~~~~~~~~~~~g~I~L~~~~~----v~~~~~~~~~~F~i~t~~-----~r~~~ 122 (160)
.|.|...++|++|||+|+ ++.|.||+++..... .|.|+|.+... +...+..++++|.|...+ .| +
T Consensus 8 ~K~g~~~~~Wk~R~f~L~~~~~l~~yk~~~~~~~---~~~i~l~~~~v~~~~~~~~~~~~~~~F~i~~~~~~~~~~r--~ 82 (102)
T cd01241 8 HKRGEYIKTWRPRYFLLKSDGSFIGYKEKPEDGD---PFLPPLNNFSVAECQLMKTERPRPNTFIIRCLQWTTVIER--T 82 (102)
T ss_pred EeecCCCCCCeeEEEEEeCCCeEEEEecCCCccC---ccccccCCeEEeeeeeeeccCCCcceEEEEeccCCcccCE--E
Confidence 566778999999999999 788998887654333 36677777652 333334577899997211 24 4
Q ss_pred EEcCCHHHHHHHHHHHHHHh
Q psy8929 123 LSAVTAGIRNNWMSAIKRTA 142 (160)
Q Consensus 123 l~a~s~~e~~~Wi~al~~~~ 142 (160)
|+|+|++|+++||.||+.++
T Consensus 83 f~a~s~ee~~eWi~ai~~v~ 102 (102)
T cd01241 83 FHVESPEEREEWIHAIQTVA 102 (102)
T ss_pred EEeCCHHHHHHHHHHHHhhC
Confidence 46999999999999998753
No 20
>PF00169 PH: PH domain; InterPro: IPR001849 The pleckstrin homology (PH) domain is a domain of about 100 residues that occurs in a wide range of proteins involved in intracellular signalling or as constituents of the cytoskeleton [, , , , , , ]. The pleckstrin homology domain commonly found in eukaryotic signalling proteins. The domain family possesses multiple functions including the abilities to bind inositol phosphates, and various proteins. PH domains have been found to possess inserted domains (such as in PLC gamma, syntrophins) and to be inserted within other domains. Mutations in Brutons tyrosine kinase (Btk) within its PH domain cause X-linked agammaglobulinaemia (XLA) in patients. Point mutations cluster into the positively charged end of the molecule around the predicted binding site for phosphatidylinositol lipids. The 3D structure of several PH domains has been determined []. All known cases have a common structure consisting of two perpendicular anti-parallel beta sheets, followed by a C-terminal amphipathic helix. The loops connecting the beta-strands differ greatly in length, making the PH domain relatively difficult to detect. There are no totally invariant residues within the PH domain. Proteins reported to contain one more PH domains belong to the following families: Pleckstrin, the protein where this domain was first detected, is the major substrate of protein kinase C in platelets. Pleckstrin is one of the rare proteins to contains two PH domains. Ser/Thr protein kinases such as the Akt/Rac family, the beta-adrenergic receptor kinases, the mu isoform of PKC and the trypanosomal NrkA family. Tyrosine protein kinases belonging to the Btk/Itk/Tec subfamily. Insulin Receptor Substrate 1 (IRS-1). Regulators of small G-proteins like guanine nucleotide releasing factor GNRP (Ras-GRF) (which contains 2 PH domains), guanine nucleotide exchange proteins like vav, dbl, SoS and Saccharomyces cerevisiae CDC24, GTPase activating proteins like rasGAP and BEM2/IPL2, and the human break point cluster protein bcr. Cytoskeletal proteins such as dynamin (see IPR001401 from INTERPRO), Caenorhabditis elegans kinesin-like protein unc-104 (see IPR001752 from INTERPRO), spectrin beta-chain, syntrophin (2 PH domains) and S. cerevisiae nuclear migration protein NUM1. Mammalian phosphatidylinositol-specific phospholipase C (PI-PLC) (see IPR000909 from INTERPRO) isoforms gamma and delta. Isoform gamma contains two PH domains, the second one is split into two parts separated by about 400 residues. Oxysterol binding proteins OSBP, S. cerevisiae OSH1 and YHR073w. Mouse protein citron, a putative rho/rac effector that binds to the GTP-bound forms of rho and rac. Several S. cerevisiae proteins involved in cell cycle regulation and bud formation like BEM2, BEM3, BUD4 and the BEM1-binding proteins BOI2 (BEB1) and BOI1 (BOB1). C. elegans protein MIG-10. C. elegans hypothetical proteins C04D8.1, K06H7.4 and ZK632.12. S. cerevisiae hypothetical proteins YBR129c and YHR155w. ; GO: 0005515 protein binding; PDB: 1DYN_B 2DYN_B 3SNH_A 3ZYS_C 1X05_A 2I5F_A 1ZM0_B 1XX0_A 2I5C_C 3A8P_D ....
Probab=99.70 E-value=2.8e-16 Score=103.10 Aligned_cols=88 Identities=30% Similarity=0.516 Sum_probs=72.1
Q ss_pred eeeeeeceEEEEEEeCCEEEEEeCCCCccCCccceeEEcCCceeeeecCC------CCCceEEEEeCCCcEEEEEcCCHH
Q psy8929 56 GFQITTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPV------ARNFGFQITTWDSKRTILSAVTAG 129 (160)
Q Consensus 56 g~~~~~WkkrwfvL~~~~L~yyk~~~~~~~~~~~g~I~L~~~~~v~~~~~------~~~~~F~i~t~~~r~~~l~a~s~~ 129 (160)
+...+.|++|||+|.++.|+||+++.+.....+.+.|+|.++........ ..+++|.|.++++.+|+|+|+|++
T Consensus 11 ~~~~~~wk~r~~vL~~~~L~~~~~~~~~~~~~~~~~i~l~~~~v~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~s~~ 90 (104)
T PF00169_consen 11 SSSRKKWKKRYFVLRDSYLLYYKSSKDKSDSKPKGSIPLDDCTVRPDPSSDFLSNKKRKNCFEITTPNGKSYLFSAESEE 90 (104)
T ss_dssp ESSSSSEEEEEEEEETTEEEEESSTTTTTESSESEEEEGTTEEEEEETSSTSTSTSSSSSEEEEEETTSEEEEEEESSHH
T ss_pred CCCCCCeEEEEEEEECCEEEEEecCccccceeeeEEEEecCceEEEcCccccccccCCCcEEEEEeCCCcEEEEEcCCHH
Confidence 35678999999999999999999998422222389999999974333322 478999999998669999999999
Q ss_pred HHHHHHHHHHHHhc
Q psy8929 130 IRNNWMSAIKRTAA 143 (160)
Q Consensus 130 e~~~Wi~al~~~~~ 143 (160)
++..|+.+|+.++.
T Consensus 91 ~~~~W~~~i~~~~~ 104 (104)
T PF00169_consen 91 ERKRWIQAIQKAIK 104 (104)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhC
Confidence 99999999999863
No 21
>cd01230 PH_EFA6 EFA6 Pleckstrin Homology (PH) domain. EFA6 Pleckstrin Homology (PH) domain. EFA6 is an guanine nucleotide exchange factor for ARF6, which is involved in membrane recycling. It consists of a SEC7 domain followed by a PH domain. The EFA6 PH domain regulates its association with the plasma membrane. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.69 E-value=4.1e-16 Score=105.76 Aligned_cols=88 Identities=17% Similarity=0.302 Sum_probs=72.5
Q ss_pred eeeeeeceEEEEEEeCCEEEEEeCCCCccCC----ccceeEEcCCce-eeeecCCCCCceEEEEeCCCcEEEEEcCCHHH
Q psy8929 56 GFQITTWTKHWFVLRGCSLLYYRDPKAEESG----VLDGVVALNNVT-SLSEVPVARNFGFQITTWDSKRTILSAVTAGI 130 (160)
Q Consensus 56 g~~~~~WkkrwfvL~~~~L~yyk~~~~~~~~----~~~g~I~L~~~~-~v~~~~~~~~~~F~i~t~~~r~~~l~a~s~~e 130 (160)
.+....|+++||||+++.|++|+|+.....+ .....|.|.++. .+......++++|.|.+++++.|.|+|.+++|
T Consensus 20 ~~~~R~Wk~~y~vL~g~~L~~yKDe~~~~~~~~~~~~~~~Isi~~a~~~ia~dy~Kr~~VF~L~~~~g~~~lfqA~~~ee 99 (117)
T cd01230 20 PFGKRSWKMFYGILRGLVLYLQKDEHKPGKSLSETELKNAISIHHALATRASDYSKKPHVFRLRTADWREFLFQTSSLKE 99 (117)
T ss_pred CCCCCcceEEEEEEECCEEEEEccCcccccccccccccceEEeccceeEeeccccCCCcEEEEEcCCCCEEEEECCCHHH
Confidence 3446799999999999999999999752111 124789999988 34444457999999999999999999999999
Q ss_pred HHHHHHHHHHHhc
Q psy8929 131 RNNWMSAIKRTAA 143 (160)
Q Consensus 131 ~~~Wi~al~~~~~ 143 (160)
|+.||.+|+.++.
T Consensus 100 ~~~Wi~~I~~~~~ 112 (117)
T cd01230 100 LQSWIERINVVAA 112 (117)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999875
No 22
>cd01237 Unc112 Unc-112 pleckstrin homology (PH) domain. Unc-112 pleckstrin homology (PH) domain. Unc-112 and related proteins contain two FERM domains with a PH domain between them. Both the PH and FERM domains have a PH-like fold. The FERM domains are likely responsible for the role of Unc-112 in organizing beta-integrin. The specific role of the Unc-112 PH domain is not known, but it is predicted to be involved in mediating membrane interactions. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.69 E-value=2.6e-16 Score=103.87 Aligned_cols=87 Identities=17% Similarity=0.350 Sum_probs=68.9
Q ss_pred eeeeeeeceEEEEEEeCCEEEEEeCCCCccCCccceeEEcCCceeeeecCC-CCCceEEEEeCC---CcEEEEEcCCHHH
Q psy8929 55 FGFQITTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPV-ARNFGFQITTWD---SKRTILSAVTAGI 130 (160)
Q Consensus 55 ~g~~~~~WkkrwfvL~~~~L~yyk~~~~~~~~~~~g~I~L~~~~~v~~~~~-~~~~~F~i~t~~---~r~~~l~a~s~~e 130 (160)
+.+..++||+|||+|++..|+||++..+..+ .+.+.|+|.+|.....+.. .++++|.+.+|. .++|+|.|+|+++
T Consensus 13 ~~~~~K~~KrrwF~lk~~~L~YyK~kee~~~-~p~i~lnl~gcev~~dv~~~~~kf~I~l~~ps~~~~r~y~l~cdsEeq 91 (106)
T cd01237 13 KKLTLKGYKQYWFTFRDTSISYYKSKEDSNG-APIGQLNLKGCEVTPDVNVAQQKFHIKLLIPTAEGMNEVWLRCDNEKQ 91 (106)
T ss_pred chhhhhhheeEEEEEeCCEEEEEccchhcCC-CCeEEEecCceEEcccccccccceEEEEecCCccCCeEEEEECCCHHH
Confidence 3466788999999999999999999877543 3367777888874443322 467999998652 2799999999999
Q ss_pred HHHHHHHHHHHh
Q psy8929 131 RNNWMSAIKRTA 142 (160)
Q Consensus 131 ~~~Wi~al~~~~ 142 (160)
+.+||+|++.|.
T Consensus 92 ya~Wmaa~rlas 103 (106)
T cd01237 92 YAKWMAACRLAS 103 (106)
T ss_pred HHHHHHHHHHhh
Confidence 999999999875
No 23
>KOG0930|consensus
Probab=99.69 E-value=1.3e-16 Score=120.68 Aligned_cols=87 Identities=24% Similarity=0.500 Sum_probs=75.0
Q ss_pred cceeeeeeeceEEEEEEeCCEEEEEeCCCCccCCccceeEEcCCceeeeecCC-CCCceEEEEeCC--------------
Q psy8929 53 RNFGFQITTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPV-ARNFGFQITTWD-------------- 117 (160)
Q Consensus 53 kk~g~~~~~WkkrwfvL~~~~L~yyk~~~~~~~~~~~g~I~L~~~~~v~~~~~-~~~~~F~i~t~~-------------- 117 (160)
|..|...++||+|||+|++++||||....+.+| +|.|+|.+.. |..+++ .+|+||+|..+.
T Consensus 268 Klgg~rvktWKrRWFiLtdNCLYYFe~tTDKEP---rGIIpLeNls-ir~VedP~kP~cfEly~ps~~gq~IKACKTe~D 343 (395)
T KOG0930|consen 268 KLGGNRVKTWKRRWFILTDNCLYYFEYTTDKEP---RGIIPLENLS-IREVEDPKKPNCFELYIPSNKGQVIKACKTEAD 343 (395)
T ss_pred eecCCcccchhheeEEeecceeeeeeeccCCCC---Ccceeccccc-eeeccCCCCCCeEEEecCCCCcCeeeeecccCC
Confidence 334458899999999999999999999999998 8999999988 666654 789999997432
Q ss_pred -------CcEEEEEcCCHHHHHHHHHHHHHHhc
Q psy8929 118 -------SKRTILSAVTAGIRNNWMSAIKRTAA 143 (160)
Q Consensus 118 -------~r~~~l~a~s~~e~~~Wi~al~~~~~ 143 (160)
+..|-++|.+.+|+++||.+|+.++.
T Consensus 344 GRvVEG~H~vYrIsA~~~Ee~~~Wi~sI~a~is 376 (395)
T KOG0930|consen 344 GRVVEGNHSVYRISAPTPEEKDEWIKSIKAAIS 376 (395)
T ss_pred ceeEeccceEEEeeCCCHHHHHHHHHHHHHHhc
Confidence 23789999999999999999999887
No 24
>PF15409 PH_8: Pleckstrin homology domain
Probab=99.66 E-value=1.5e-15 Score=97.66 Aligned_cols=82 Identities=22% Similarity=0.388 Sum_probs=69.7
Q ss_pred cceeeeeeeceEEEEEE--eCCEEEEEeCCCCccCCccceeEEcCCceeeeecCCCCCceEEEEeCCCcEEEEEcCCHHH
Q psy8929 53 RNFGFQITTWTKHWFVL--RGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPVARNFGFQITTWDSKRTILSAVTAGI 130 (160)
Q Consensus 53 kk~g~~~~~WkkrwfvL--~~~~L~yyk~~~~~~~~~~~g~I~L~~~~~v~~~~~~~~~~F~i~t~~~r~~~l~a~s~~e 130 (160)
||.....++|++|||+| ..+.|.||.++++... .|.|+|..+. |+.. .+...|.|.+.+ ..|+|.|.|+++
T Consensus 5 Kkrr~~lqG~~kRyFvL~~~~G~LsYy~~~~~~~~---rGsi~v~~a~-is~~--~~~~~I~idsg~-~i~hLKa~s~~~ 77 (89)
T PF15409_consen 5 KKRRKPLQGWHKRYFVLDFEKGTLSYYRNQNSGKL---RGSIDVSLAV-ISAN--KKSRRIDIDSGD-EIWHLKAKSQED 77 (89)
T ss_pred eeccccCCCceeEEEEEEcCCcEEEEEecCCCCee---EeEEEccceE-EEec--CCCCEEEEEcCC-eEEEEEcCCHHH
Confidence 55566789999999999 8899999999887654 8999999986 4443 256789999864 799999999999
Q ss_pred HHHHHHHHHHH
Q psy8929 131 RNNWMSAIKRT 141 (160)
Q Consensus 131 ~~~Wi~al~~~ 141 (160)
.+.|+.||+.+
T Consensus 78 f~~Wv~aL~~a 88 (89)
T PF15409_consen 78 FQRWVSALQKA 88 (89)
T ss_pred HHHHHHHHHhc
Confidence 99999999875
No 25
>cd01254 PH_PLD Phospholipase D (PLD) pleckstrin homology (PH) domain. Phospholipase D (PLD) pleckstrin homology (PH) domain. PLD hydrolyzes phosphatidylcholine to phosphatidic acid (PtdOH), which can bind target proteins. PLD contains a PH domain, a PX domain and four conserved PLD signature domains. The PLD PH domain is specific for bisphosphorylated inositides. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.63 E-value=3.1e-15 Score=102.43 Aligned_cols=81 Identities=20% Similarity=0.398 Sum_probs=69.1
Q ss_pred eeeeeceEEEEEEeCCEEEEEeCCCCccCCccceeEEcCCceeeeecCC-------------CCCceEEEEeCCCcEEEE
Q psy8929 57 FQITTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPV-------------ARNFGFQITTWDSKRTIL 123 (160)
Q Consensus 57 ~~~~~WkkrwfvL~~~~L~yyk~~~~~~~~~~~g~I~L~~~~~v~~~~~-------------~~~~~F~i~t~~~r~~~l 123 (160)
.....|++|||+|+++.|.||+++.+..+ .|.|.|+....|..... .+.++|.|.+++ |+|.|
T Consensus 28 ~~~~~w~kRWFvlr~s~L~Y~~~~~~~~~---~~vil~D~~f~v~~~~~~~~~~~~~~~~~~~~~~~~~i~t~~-R~~~l 103 (121)
T cd01254 28 RMCDRWQKRWFIVKESFLAYMDDPSSAQI---LDVILFDVDFKVNGGGKEDISLAVELKDITGLRHGLKITNSN-RSLKL 103 (121)
T ss_pred ccccCCcceeEEEeCCEEEEEcCCCCCce---eeEEEEcCCccEEeCCcccccccccccccCCCceEEEEEcCC-cEEEE
Confidence 34568999999999999999999998666 89999977776664221 467899999986 99999
Q ss_pred EcCCHHHHHHHHHHHHHH
Q psy8929 124 SAVTAGIRNNWMSAIKRT 141 (160)
Q Consensus 124 ~a~s~~e~~~Wi~al~~~ 141 (160)
.|+|+.++.+||++|+.|
T Consensus 104 ~a~s~~~~~~Wi~~i~~a 121 (121)
T cd01254 104 KCKSSRKLKQWMASIEDA 121 (121)
T ss_pred EeCCHHHHHHHHHHHHhC
Confidence 999999999999999874
No 26
>cd01256 PH_dynamin Dynamin pleckstrin homology (PH) domain. Dynamin pleckstrin homology (PH) domain. Dynamin is a GTPase that regulates endocytic vesicle formation. It has an N-terminal GTPase domain, followed by a PH domain, a GTPase effector domain and a C-terminal proline arginine rich domain. Dynamin-like proteins, which are found in metazoa, plants and yeast have the same domain architecture as dynamin, but lack the PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.57 E-value=2.5e-14 Score=92.31 Aligned_cols=81 Identities=25% Similarity=0.395 Sum_probs=69.0
Q ss_pred eeeeeceEEEEEEeCCEEEEEeCCCCccCCccceeEEcCCceeeeecCC---CCCceEEEEeCCC-------cEEEEEcC
Q psy8929 57 FQITTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPV---ARNFGFQITTWDS-------KRTILSAV 126 (160)
Q Consensus 57 ~~~~~WkkrwfvL~~~~L~yyk~~~~~~~~~~~g~I~L~~~~~v~~~~~---~~~~~F~i~t~~~-------r~~~l~a~ 126 (160)
+..+.-|.|||||+..+|+||+++++.++ ++.|+|.+.. +..++. +++++|+|..+++ +++-|+|+
T Consensus 14 ~m~ggsK~~WFVLt~~~L~wykd~eeKE~---kyilpLdnLk-~Rdve~gf~sk~~~FeLfnpd~rnvykd~k~lel~~~ 89 (110)
T cd01256 14 IMKGGSKDYWFVLTSESLSWYKDDEEKEK---KYMLPLDGLK-LRDIEGGFMSRNHKFALFYPDGRNVYKDYKQLELGCE 89 (110)
T ss_pred eecCCCcceEEEEecceeeeecccccccc---cceeeccccE-EEeecccccCCCcEEEEEcCcccccccchheeeecCC
Confidence 44456789999999999999999999988 8999999988 555544 6889999987654 57789999
Q ss_pred CHHHHHHHHHHHHHH
Q psy8929 127 TAGIRNNWMSAIKRT 141 (160)
Q Consensus 127 s~~e~~~Wi~al~~~ 141 (160)
|.+|++.|...+-.|
T Consensus 90 ~~e~vdswkasflra 104 (110)
T cd01256 90 TLEEVDSWKASFLRA 104 (110)
T ss_pred CHHHHHHHHHHHHhc
Confidence 999999999888665
No 27
>cd01219 PH_FGD FGD (faciogenital dysplasia protein) pleckstrin homology (PH) domain. FGD (faciogenital dysplasia protein) pleckstrin homology (PH) domain. FGD has a RhoGEF (DH) domain, followed by a PH domain, a FYVE domain and a C-terminal PH domain. FGD is a guanine nucleotide exchange factor that activates the Rho GTPase Cdc42. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.55 E-value=7.4e-14 Score=92.73 Aligned_cols=89 Identities=16% Similarity=0.157 Sum_probs=69.1
Q ss_pred ceeeeeeeceEEEEEEeCCEEEEEeCCCCcc--CCccceeEEcCCceeeeecCCCCCceEEEEeCCCcEEEEEcCCHHHH
Q psy8929 54 NFGFQITTWTKHWFVLRGCSLLYYRDPKAEE--SGVLDGVVALNNVTSLSEVPVARNFGFQITTWDSKRTILSAVTAGIR 131 (160)
Q Consensus 54 k~g~~~~~WkkrwfvL~~~~L~yyk~~~~~~--~~~~~g~I~L~~~~~v~~~~~~~~~~F~i~t~~~r~~~l~a~s~~e~ 131 (160)
|.+...+.|+.|||.|-++.|.|++...... .=...+.|+|.++......+...+|+|.|.+++ ++|+|+|+|++|+
T Consensus 10 K~~~~~~~~k~RyffLFnd~Ll~~~~~~~~~~~~y~~~~~i~l~~~~v~~~~~~~~~~~F~I~~~~-rsf~l~A~s~eEk 88 (101)
T cd01219 10 KISSTTEKTEERYLFLFNDLLLYCVPRKMIGGSKFKVRARIDVSGMQVCEGDNLERPHSFLVSGKQ-RCLELQARTQKEK 88 (101)
T ss_pred EEecCCCCceeEEEEEeCCEEEEEEcccccCCCcEEEEEEEecccEEEEeCCCCCcCceEEEecCC-cEEEEEcCCHHHH
Confidence 4455567899999999988999998542110 012368899999884332233578999999986 9999999999999
Q ss_pred HHHHHHHHHHhc
Q psy8929 132 NNWMSAIKRTAA 143 (160)
Q Consensus 132 ~~Wi~al~~~~~ 143 (160)
++||.||+.+|.
T Consensus 89 ~~W~~ai~~~i~ 100 (101)
T cd01219 89 NDWVQAIFSIID 100 (101)
T ss_pred HHHHHHHHHHhh
Confidence 999999999874
No 28
>PF15410 PH_9: Pleckstrin homology domain; PDB: 1WJM_A 1BTN_A 1MPH_A.
Probab=99.53 E-value=1.4e-13 Score=93.94 Aligned_cols=89 Identities=24% Similarity=0.411 Sum_probs=59.1
Q ss_pred cceeeeeeeceEEEEEEeCCEEEEEeCCCCc-----------cCCccceeEEcCCceeeeecCC--CCCceEEEEeCCCc
Q psy8929 53 RNFGFQITTWTKHWFVLRGCSLLYYRDPKAE-----------ESGVLDGVVALNNVTSLSEVPV--ARNFGFQITTWDSK 119 (160)
Q Consensus 53 kk~g~~~~~WkkrwfvL~~~~L~yyk~~~~~-----------~~~~~~g~I~L~~~~~v~~~~~--~~~~~F~i~t~~~r 119 (160)
++.......|+..|+||+++.|++|+++... +...+.+.|+|..+.. ....+ .++|+|.|.++++.
T Consensus 17 kk~~~~~R~Wk~~y~vL~g~~L~~~k~~~~~~~~~~~~~~~~~~~~p~~~i~L~~a~a-~~a~dY~Kr~~VFrL~~~dg~ 95 (119)
T PF15410_consen 17 KKASRSKRSWKQVYAVLQGGQLYFYKDEKSPASSTPPDIQSVENAKPDSSISLHHALA-EIASDYTKRKNVFRLRTADGS 95 (119)
T ss_dssp CC---S---EEEEEEEEETTEEEEESSHHHHCCT-BS---SS--E-----EE-TT-EE-EEETTBTTCSSEEEEE-TTS-
T ss_pred CCcCCCCCCccEEeEEEECCEEEEEccCcccccCCcccccccccCcceeEEEecceEE-EeCcccccCCeEEEEEeCCCC
Confidence 4444467899999999999999999994321 0112356799999884 43443 68999999999999
Q ss_pred EEEEEcCCHHHHHHHHHHHHHHh
Q psy8929 120 RTILSAVTAGIRNNWMSAIKRTA 142 (160)
Q Consensus 120 ~~~l~a~s~~e~~~Wi~al~~~~ 142 (160)
.|.|+|.|++||.+||++|+.+.
T Consensus 96 e~Lfqa~~~~~m~~Wi~~IN~~A 118 (119)
T PF15410_consen 96 EYLFQASDEEEMNEWIDAINYAA 118 (119)
T ss_dssp EEEEE-SSHHHHHHHHHHHHHH-
T ss_pred EEEEECCCHHHHHHHHHHHhhhc
Confidence 99999999999999999998764
No 29
>smart00233 PH Pleckstrin homology domain. Domain commonly found in eukaryotic signalling proteins. The domain family possesses multiple functions including the abilities to bind inositol phosphates, and various proteins. PH domains have been found to possess inserted domains (such as in PLC gamma, syntrophins) and to be inserted within other domains. Mutations in Brutons tyrosine kinase (Btk) within its PH domain cause X-linked agammaglobulinaemia (XLA) in patients. Point mutations cluster into the positively charged end of the molecule around the predicted binding site for phosphatidylinositol lipids.
Probab=99.50 E-value=6.8e-13 Score=85.71 Aligned_cols=84 Identities=30% Similarity=0.587 Sum_probs=70.0
Q ss_pred eeeeceEEEEEEeCCEEEEEeCCCCccCCccceeEEcCCceeeeecCC----CCCceEEEEeCCCcEEEEEcCCHHHHHH
Q psy8929 58 QITTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPV----ARNFGFQITTWDSKRTILSAVTAGIRNN 133 (160)
Q Consensus 58 ~~~~WkkrwfvL~~~~L~yyk~~~~~~~~~~~g~I~L~~~~~v~~~~~----~~~~~F~i~t~~~r~~~l~a~s~~e~~~ 133 (160)
....|++|||+|.++.|.||+++.......+.+.|+|.++. +..... ..+++|.|.++++.+++|.|+|++|+..
T Consensus 14 ~~~~~~~~~~~L~~~~l~~~~~~~~~~~~~~~~~i~l~~~~-v~~~~~~~~~~~~~~f~l~~~~~~~~~f~~~s~~~~~~ 92 (102)
T smart00233 14 KKKSWKKRYFVLFNSTLLYYKSEKAKKDYKPKGSIDLSGIT-VREAPDPDSAKKPHCFEIKTADRRSYLLQAESEEEREE 92 (102)
T ss_pred ccCCceEEEEEEECCEEEEEeCCCccccCCCceEEECCcCE-EEeCCCCccCCCceEEEEEecCCceEEEEcCCHHHHHH
Confidence 45689999999999999999998764323347999999995 555443 3689999999875599999999999999
Q ss_pred HHHHHHHHh
Q psy8929 134 WMSAIKRTA 142 (160)
Q Consensus 134 Wi~al~~~~ 142 (160)
|+.+|+.++
T Consensus 93 W~~~i~~~~ 101 (102)
T smart00233 93 WVDALRKAI 101 (102)
T ss_pred HHHHHHHhh
Confidence 999999875
No 30
>PF15413 PH_11: Pleckstrin homology domain; PDB: 3MDB_D 3FEH_A 3LJU_X 3FM8_C.
Probab=99.49 E-value=2.1e-13 Score=92.18 Aligned_cols=82 Identities=24% Similarity=0.423 Sum_probs=48.3
Q ss_pred eeeceEEEEEEe-CCEEEEEeCCCCccC----------CccceeEEcCC----ceeee---ecCCCCCceEEEEeCCCcE
Q psy8929 59 ITTWTKHWFVLR-GCSLLYYRDPKAEES----------GVLDGVVALNN----VTSLS---EVPVARNFGFQITTWDSKR 120 (160)
Q Consensus 59 ~~~WkkrwfvL~-~~~L~yyk~~~~~~~----------~~~~g~I~L~~----~~~v~---~~~~~~~~~F~i~t~~~r~ 120 (160)
.+.|++|||+|. ++.|.||+.+.+... ....+.+.... ...+. .........|.|.|+. ++
T Consensus 13 ~kgWk~RwFiL~k~~~L~YyK~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~T~~-kt 91 (112)
T PF15413_consen 13 GKGWKKRWFILRKDGVLSYYKIPRDKKDVRIIGEESSRVIRKGDWSISRRSSRIQGIKDKNPFGEIHLKVFSIFTPT-KT 91 (112)
T ss_dssp -S--EEEEEEEE-TTEEEEESS-------------TT-SB-SEEEE---GGGT-EEEES-T--SS-SSEEEEEE-SS--E
T ss_pred CcCccccEEEEEeCCEEEEeecccccccccccccchhceEeecccCcccccccccccccCCcccCcCCCCcEEECCC-cE
Confidence 789999999999 999999999333110 00022222211 11111 0111345788999986 89
Q ss_pred EEEEcCCHHHHHHHHHHHHHH
Q psy8929 121 TILSAVTAGIRNNWMSAIKRT 141 (160)
Q Consensus 121 ~~l~a~s~~e~~~Wi~al~~~ 141 (160)
|+|.|+|.+|+.+||+||+.|
T Consensus 92 ~~l~~~t~~d~~~Wi~aL~~~ 112 (112)
T PF15413_consen 92 FHLRCETREDRYDWIEALQEA 112 (112)
T ss_dssp EEEEESSHHHHHHHHHHHHH-
T ss_pred EEEEECCHHHHHHHHHHHHhC
Confidence 999999999999999999875
No 31
>cd00821 PH Pleckstrin homology (PH) domain. Pleckstrin homology (PH) domain. PH domains are only found in eukaryotes. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.42 E-value=4e-12 Score=81.27 Aligned_cols=82 Identities=29% Similarity=0.548 Sum_probs=66.9
Q ss_pred eeeceEEEEEEeCCEEEEEeCCCCccCCccceeEEcCCceeeeecCCC--CCceEEEEeCCCcEEEEEcCCHHHHHHHHH
Q psy8929 59 ITTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPVA--RNFGFQITTWDSKRTILSAVTAGIRNNWMS 136 (160)
Q Consensus 59 ~~~WkkrwfvL~~~~L~yyk~~~~~~~~~~~g~I~L~~~~~v~~~~~~--~~~~F~i~t~~~r~~~l~a~s~~e~~~Wi~ 136 (160)
...|++|||+|.++.|.+|+.........+.+.|+|.++. +...+.. .+++|.|.+.+++.++|+|+|++|+..|+.
T Consensus 13 ~~~w~~~~~~L~~~~l~~~~~~~~~~~~~~~~~i~l~~~~-v~~~~~~~~~~~~f~i~~~~~~~~~~~~~s~~~~~~W~~ 91 (96)
T cd00821 13 RKGWKRRWFVLFNDLLLYYKKKSSKKSYKPKGSIPLSGAE-VEESPDDSGRKNCFEIRTPDGRSYLLQAESEEEREEWIE 91 (96)
T ss_pred hCCccEEEEEEECCEEEEEECCCCCcCCCCcceEEcCCCE-EEECCCcCCCCcEEEEecCCCcEEEEEeCCHHHHHHHHH
Confidence 3789999999999999999988763111237999999966 5554442 579999998766899999999999999999
Q ss_pred HHHHH
Q psy8929 137 AIKRT 141 (160)
Q Consensus 137 al~~~ 141 (160)
+|+.+
T Consensus 92 ~l~~~ 96 (96)
T cd00821 92 ALQSA 96 (96)
T ss_pred HHhcC
Confidence 99863
No 32
>cd00900 PH-like Pleckstrin homology-like domain. Pleckstrin homology-like domain. This family includes the PH domain, both the Shc-like and IRS-like PTB domains, the ran-binding domain, the EVH1 domain, a domain in neurobeachin and the third domain of FERM. All of these domains have a PH fold, but lack significant sequence similarity. They are generally involved in targeting to protein to the appropriate cellular location or interacting with a binding partner. The PH domain is commonly found in eukaryotic signaling proteins. This domain family possesses multiple functions including the ability to bind inositol phosphates and to other proteins.
Probab=99.41 E-value=4.4e-12 Score=81.66 Aligned_cols=79 Identities=24% Similarity=0.490 Sum_probs=68.2
Q ss_pred eeeceEEEEEEeCCEEEEEeCCCCccCCccc-eeEEcCCceeeeecCC--CCCceEEEEeCC--CcEEEEEcCCHHHHHH
Q psy8929 59 ITTWTKHWFVLRGCSLLYYRDPKAEESGVLD-GVVALNNVTSLSEVPV--ARNFGFQITTWD--SKRTILSAVTAGIRNN 133 (160)
Q Consensus 59 ~~~WkkrwfvL~~~~L~yyk~~~~~~~~~~~-g~I~L~~~~~v~~~~~--~~~~~F~i~t~~--~r~~~l~a~s~~e~~~ 133 (160)
...|++|||+|.+..|.+|+++..... . +.++|.... +...+. ..+++|+|.+.+ .+.++|+|+|++|+..
T Consensus 16 ~~~w~~~~~~l~~~~l~~~~~~~~~~~---~~~~~~l~~~~-v~~~~~~~~~~~~F~i~~~~~~~~~~~~~~~~~~~~~~ 91 (99)
T cd00900 16 GKRWKRRWFFLFDDGLLLYKSDDKKEI---KPGSIPLSEIS-VEEDPDGSDDPNCFAIVTKDRGRRVFVFQADSEEEAQE 91 (99)
T ss_pred ccCceeeEEEEECCEEEEEEcCCCCcC---CCCEEEccceE-EEECCCCCCCCceEEEECCCCCcEEEEEEcCCHHHHHH
Confidence 478999999999999999999987665 3 689999988 666544 467999999985 6899999999999999
Q ss_pred HHHHHHHH
Q psy8929 134 WMSAIKRT 141 (160)
Q Consensus 134 Wi~al~~~ 141 (160)
|+.+|+.+
T Consensus 92 W~~al~~~ 99 (99)
T cd00900 92 WVEALQQA 99 (99)
T ss_pred HHHHHhcC
Confidence 99999864
No 33
>cd01220 PH_CDEP Chondrocyte-derived ezrin-like domain containing protein (CDEP) Pleckstrin homology (PH) domain. Chondrocyte-derived ezrin-like domain containing protein (CDEP) Pleckstrin homology (PH) domain. CDEP consists of a Ferm domain, a rhoGEF (DH) domain followed by two PH domains. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.41 E-value=4e-12 Score=83.95 Aligned_cols=82 Identities=16% Similarity=0.223 Sum_probs=63.7
Q ss_pred eeceEEEEEEeCCEEEEEeCCCCccCCccceeEEcCCceeeeecCC--CCCceEEEEeCCCcEEEEEcCCHHHHHHHHHH
Q psy8929 60 TTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPV--ARNFGFQITTWDSKRTILSAVTAGIRNNWMSA 137 (160)
Q Consensus 60 ~~WkkrwfvL~~~~L~yyk~~~~~~~~~~~g~I~L~~~~~v~~~~~--~~~~~F~i~t~~~r~~~l~a~s~~e~~~Wi~a 137 (160)
..|.|+||.+++..||+.+...+...=...|.|+|.++. |...++ ..+|+|+|.++. +.|.|+|+|++|+++||.+
T Consensus 15 ~~~~R~~FLFnD~LlY~~~~~~~~~~y~~~~~i~L~~~~-V~~~~~~~~~~~~F~I~~~~-ks~~l~A~s~~Ek~~Wi~~ 92 (99)
T cd01220 15 GLQQRMFFLFSDLLLYTSKSPTDQNSFRILGHLPLRGML-TEESEHEWGVPHCFTIFGGQ-CAITVAASTRAEKEKWLAD 92 (99)
T ss_pred CCceEEEEEccceEEEEEeecCCCceEEEEEEEEcCceE-EeeccCCcCCceeEEEEcCC-eEEEEECCCHHHHHHHHHH
Confidence 467777777788777766654432111237999999998 665544 468999999985 8999999999999999999
Q ss_pred HHHHhc
Q psy8929 138 IKRTAA 143 (160)
Q Consensus 138 l~~~~~ 143 (160)
|+++|.
T Consensus 93 i~~aI~ 98 (99)
T cd01220 93 LSKAIA 98 (99)
T ss_pred HHHHhh
Confidence 999985
No 34
>cd01236 PH_outspread Outspread Pleckstrin homology (PH) domain. Outspread Pleckstrin homology (PH) domain. Outspread contains two PH domains and a C-terminal coiled-coil region. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.32 E-value=1.5e-12 Score=86.65 Aligned_cols=71 Identities=18% Similarity=0.339 Sum_probs=46.8
Q ss_pred CCCceEEEEEEeCC-eEEEeeCCC-cccCCcccceeecccceeecccccccceeeeeeeceEEEEEEeCCEEEEEeCCCC
Q psy8929 5 KHTWTKHWFVLRGC-SLLYYRDPK-AEESGVLDGVVALNNVTSLSEVPVARNFGFQITTWTKHWFVLRGCSLLYYRDPKA 82 (160)
Q Consensus 5 ~~~Wkkrwfvl~~~-~L~yy~~~~-~~~~~~l~g~i~l~~~~~~~~~~~~kk~g~~~~~WkkrwfvL~~~~L~yyk~~~~ 82 (160)
.|+||||||||+++ .|+||+++. +..+ .|+|+|+.|..|......+.. ..-+.+.++...+|..-++.
T Consensus 21 ~K~WkrRWFvL~~~~~L~y~~d~~~~~~p---~G~IdL~~~~~V~~~~~~~~~-------~~~f~I~tp~R~f~l~Aete 90 (104)
T cd01236 21 SKRWQRRWFILYDHGLLTYALDEMPTTLP---QGTIDMNQCTDVVDAEARTGQ-------KFSICILTPDKEHFIKAETK 90 (104)
T ss_pred eccccceEEEEeCCCEEEEeeCCCCCccc---ceEEEccceEEEeecccccCC-------ccEEEEECCCceEEEEeCCH
Confidence 78999999999964 555554442 3333 699999999988866543321 11234566777777776665
Q ss_pred ccC
Q psy8929 83 EES 85 (160)
Q Consensus 83 ~~~ 85 (160)
++.
T Consensus 91 ~E~ 93 (104)
T cd01236 91 EEI 93 (104)
T ss_pred HHH
Confidence 544
No 35
>cd01238 PH_Tec Tec pleckstrin homology (PH) domain. Tec pleckstrin homology (PH) domain. Proteins in the Tec family of cytoplasmic protein tyrosine kinases that includes Bruton's tyrosine kinase (BTK), BMX, IL2-inducible T-cell kinase (Itk) and Tec. These proteins generally have an N-terminal PH domain, followed by a Tek homology (TH) domain, a SH3 domain, a SH2 domain and a kinase domain. Tec PH domains tether these proteins to membranes following the activation of PI3K and its subsequent phosphorylation of phosphoinositides. The importance of PH domain membrane anchoring is confirmed by the discovery of a mutation of a critical arginine residue in the BTK PH domain, which causes X-linked agammaglobulinemia (XLA) in humans and a related disorder is mice. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few dis
Probab=99.32 E-value=2.1e-12 Score=86.44 Aligned_cols=75 Identities=19% Similarity=0.311 Sum_probs=46.4
Q ss_pred CCceEEEEEEeCCeEEEeeCCCcccCCcccceeecccceeecccccccceeeeeeeceEEEEEEeCCEEEEEeCCCC
Q psy8929 6 HTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPVARNFGFQITTWTKHWFVLRGCSLLYYRDPKA 82 (160)
Q Consensus 6 ~~Wkkrwfvl~~~~L~yy~~~~~~~~~~l~g~i~l~~~~~~~~~~~~kk~g~~~~~WkkrwfvL~~~~L~yyk~~~~ 82 (160)
+|||+|||||+++.|+||+++.+.... +.|.|+|..+..+.........+... ..+-.+-+.+++..+|..-++.
T Consensus 19 ~nwKkRwFvL~~~~L~Yyk~~~~~~~~-~kG~I~L~~~~~ve~~~~~~~~~~~~-~~~~~F~i~t~~r~~yl~A~s~ 93 (106)
T cd01238 19 LNYKERLFVLTKSKLSYYEGDFEKRGS-KKGSIDLSKIKCVETVKPEKNPPIPE-RFKYPFQVVHDEGTLYVFAPTE 93 (106)
T ss_pred CCceeEEEEEcCCEEEEECCCcccccC-cceeEECCcceEEEEecCCcCccccc-ccCccEEEEeCCCeEEEEcCCH
Confidence 499999999999999999988764222 36999999987655444333221111 1122233455554555544433
No 36
>KOG3640|consensus
Probab=99.31 E-value=4.5e-12 Score=108.55 Aligned_cols=124 Identities=29% Similarity=0.457 Sum_probs=91.2
Q ss_pred CeEEEeeCCCcccCCcccceeecccceeecccccccceee--------eeeeceEEEEEEeCCEEEEEeCCCCccCCccc
Q psy8929 18 CSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPVARNFGF--------QITTWTKHWFVLRGCSLLYYRDPKAEESGVLD 89 (160)
Q Consensus 18 ~~L~yy~~~~~~~~~~l~g~i~l~~~~~~~~~~~~kk~g~--------~~~~WkkrwfvL~~~~L~yyk~~~~~~~~~~~ 89 (160)
.+..||.++ --.+|+|+|.|..-..+...-+..-+|| +++.|+||||+|.++.+.|++.+.++....+.
T Consensus 959 ~t~~l~~v~---~vyPLEG~v~lkv~C~~~~~idVEYrGFLtmfed~sgfGaWhRyWc~L~gg~I~fWk~PdDEkrK~Pi 1035 (1116)
T KOG3640|consen 959 DTRLLYLVD---VVYPLEGTVKLKVHCSLPDAIDVEYRGFLTMFEDGSGFGAWHRYWCALHGGEIKFWKYPDDEKRKVPI 1035 (1116)
T ss_pred cceEEeecc---ccccccceEEEeeecccccccceeeeeeeeeeeccCCCchhhhhhHHhcCCeeeeecCcchhcccCcc
Confidence 334555544 2457799998886443333222222233 46789999999999999999999997766779
Q ss_pred eeEEcCCcee--eeecCC---CCCceEEEEeC------------CCc-EEEEEcCCHHHHHHHHHHHHHHhcc
Q psy8929 90 GVVALNNVTS--LSEVPV---ARNFGFQITTW------------DSK-RTILSAVTAGIRNNWMSAIKRTAAM 144 (160)
Q Consensus 90 g~I~L~~~~~--v~~~~~---~~~~~F~i~t~------------~~r-~~~l~a~s~~e~~~Wi~al~~~~~~ 144 (160)
|.|+|+.|+. |++... +++|.|.|.+. ..| ...|.|+|.+|++.|+++|++++..
T Consensus 1036 g~IDLt~CTsq~ie~a~rdicar~ntFhie~~rPl~~Dqep~~ie~r~Rv~LaADTkeel~~Wls~iN~tL~~ 1108 (1116)
T KOG3640|consen 1036 GQIDLTKCTSQSIEEARRDICARPNTFHIEVWRPLEDDQEPLLIEKRLRVMLAADTKEELQSWLSAINDTLKQ 1108 (1116)
T ss_pred eeeehhhhhccccccchhhhccCCceeEEEeecccccccCcchhhhcceeeeecccHHHHHHHHHHHHHHHHH
Confidence 9999999996 444432 68999999821 123 6789999999999999999998763
No 37
>cd01251 PH_centaurin_alpha Centaurin alpha Pleckstrin homology (PH) domain. Centaurin alpha Pleckstrin homology (PH) domain. Centaurin alpha is a phophatidlyinositide binding protein consisting of an N-terminal ArfGAP domain and two PH domains. In response to growth factor activation, PI3K phosphorylates phosphatidylinositol 4,5-bisphosphate to phosphatidylinositol 3,4,5-trisphosphate. Centaurin alpha 1 is recruited to the plasma membrane following growth factor stimulation by specific binding of its PH domain to phosphatidylinositol 3,4,5-trisphosphate. Centaurin alpha 2 is constitutively bound to the plasma membrane since it binds phosphatidylinositol 4,5-bisphosphate and phosphatidylinositol 3,4,5-trisphosphate with equal affinity. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specifici
Probab=99.24 E-value=1e-11 Score=82.71 Aligned_cols=37 Identities=30% Similarity=0.622 Sum_probs=32.5
Q ss_pred CCCceEEEEEEeCCeEEEeeCCCcccCCcccceeecccce
Q psy8929 5 KHTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVT 44 (160)
Q Consensus 5 ~~~Wkkrwfvl~~~~L~yy~~~~~~~~~~l~g~i~l~~~~ 44 (160)
.++||||||||+++.|+||+++.+..+ .|.|+|..+.
T Consensus 13 ~k~wkkRwFvL~~~~L~Yyk~~~d~~~---~G~I~L~~~~ 49 (103)
T cd01251 13 TEGFKKRWFTLDDRRLMYFKDPLDAFA---KGEVFLGSQE 49 (103)
T ss_pred CCCceeEEEEEeCCEEEEECCCCCcCc---CcEEEeeccc
Confidence 478999999999999999999887655 7999998765
No 38
>cd01264 PH_melted Melted pleckstrin homology (PH) domain. Melted pleckstrin homology (PH) domain. The melted protein has a C-terminal PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.23 E-value=1.2e-11 Score=81.70 Aligned_cols=82 Identities=15% Similarity=0.294 Sum_probs=54.4
Q ss_pred CCCceEEEEEEeCCeEEEeeCCCcccCCcccceeecccceeecccccccceeeeeeeceEEEEEEeCCEEEEEeCCCCcc
Q psy8929 5 KHTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPVARNFGFQITTWTKHWFVLRGCSLLYYRDPKAEE 84 (160)
Q Consensus 5 ~~~Wkkrwfvl~~~~L~yy~~~~~~~~~~l~g~i~l~~~~~~~~~~~~kk~g~~~~~WkkrwfvL~~~~L~yyk~~~~~~ 84 (160)
-|+|+||||||+++.|.||++.....+ +.|+|+|+.|..+......++. .+-...|-+.++..-+|...+++.+
T Consensus 16 ~K~WkrRwF~L~~~~L~y~K~~~~~~~--~~g~IdL~~~~sVk~~~~~~~~----~~~~~~Fei~tp~rt~~l~A~se~e 89 (101)
T cd01264 16 IKRWKTRYFTLSGAQLLFQKGKSKDDP--DDCSIDLSKIRSVKAVAKKRRD----RSLPKAFEIFTADKTYILKAKDEKN 89 (101)
T ss_pred eecceeEEEEEeCCEEEEEeccCccCC--CCceEEcccceEEeeccccccc----cccCcEEEEEcCCceEEEEeCCHHH
Confidence 478999999999999999998865433 3599999999887655433221 1112245567777777766665554
Q ss_pred CCccceeE
Q psy8929 85 SGVLDGVV 92 (160)
Q Consensus 85 ~~~~~g~I 92 (160)
...|...|
T Consensus 90 ~e~WI~~i 97 (101)
T cd01264 90 AEEWLQCL 97 (101)
T ss_pred HHHHHHHH
Confidence 43444433
No 39
>cd01233 Unc104 Unc-104 pleckstrin homology (PH) domain. Unc-104 pleckstrin homology (PH) domain. Unc-104 is a kinesin-like protein containing an N-terminal kinesin catalytic domain, followed by a forkhead associated domain with a C-terminal PH domain. These proteins are responsible for the transport of membrane vesicles along microtubules. The mechanism involves the binding of the PH domain to phosphatidiylinositol (4,5) P2-containing liposomes.
Probab=99.17 E-value=3.6e-11 Score=79.62 Aligned_cols=74 Identities=19% Similarity=0.221 Sum_probs=48.7
Q ss_pred CCCCceEEEEEEeCCeEEEeeCCCcccCCcccceeecccceeecccccccceeeeeeeceEEEEEEeCCEEEEEeCCCCc
Q psy8929 4 KKHTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPVARNFGFQITTWTKHWFVLRGCSLLYYRDPKAE 83 (160)
Q Consensus 4 ~~~~Wkkrwfvl~~~~L~yy~~~~~~~~~~l~g~i~l~~~~~~~~~~~~kk~g~~~~~WkkrwfvL~~~~L~yyk~~~~~ 83 (160)
..++|+||||||+++.|.||+++.+..+ .|.|+|+.+.........+..+. ...|.+.++...+|+..+++.
T Consensus 14 ~~k~WkkRwfvL~~~~L~yyk~~~~~~~---~~~I~L~~~~v~~~~~~~~~~~~-----~~~F~I~t~~rt~~~~A~s~~ 85 (100)
T cd01233 14 TNSGWTRRFVVVRRPYLHIYRSDKDPVE---RGVINLSTARVEHSEDQAAMVKG-----PNTFAVCTKHRGYLFQALSDK 85 (100)
T ss_pred CCCCcEEEEEEEECCEEEEEccCCCccE---eeEEEecccEEEEccchhhhcCC-----CcEEEEECCCCEEEEEcCCHH
Confidence 4688999999999999999999887655 79999997643322222221110 124455666666666655554
Q ss_pred cC
Q psy8929 84 ES 85 (160)
Q Consensus 84 ~~ 85 (160)
+.
T Consensus 86 e~ 87 (100)
T cd01233 86 EM 87 (100)
T ss_pred HH
Confidence 43
No 40
>cd01247 PH_GPBP Goodpasture antigen binding protein (GPBP) Pleckstrin homology (PH) domain. Goodpasture antigen binding protein (GPBP) Pleckstrin homology (PH) domain. The GPBP protein is a kinase that phosphorylates an N-terminal region of the alpha 3 chain of type IV collagen , which is commonly known as the goodpasture antigen. It has has an N-terminal PH domain and a C-terminal START domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cyt
Probab=99.17 E-value=5.8e-11 Score=77.32 Aligned_cols=44 Identities=25% Similarity=0.522 Sum_probs=35.7
Q ss_pred CCCCCCceEEEEEEeCCeEEEeeCCCcccCCcccceeecccceee
Q psy8929 2 LNKKHTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSL 46 (160)
Q Consensus 2 ~~~~~~Wkkrwfvl~~~~L~yy~~~~~~~~~~l~g~i~l~~~~~~ 46 (160)
.+.-++||+|||||+++.|.||+++.+...++ .|.|+|+.+..+
T Consensus 9 ~~~~k~Wk~RwFvL~~g~L~Yyk~~~~~~~~~-~G~I~L~~~~i~ 52 (91)
T cd01247 9 TNYINGWQDRYFVLKEGNLSYYKSEAEKSHGC-RGSIFLKKAIIA 52 (91)
T ss_pred ccccCCCceEEEEEECCEEEEEecCccCcCCC-cEEEECcccEEE
Confidence 34568999999999999999999987654433 599999997543
No 41
>cd01265 PH_PARIS-1 PARIS-1 pleckstrin homology (PH) domain. PARIS-1 pleckstrin homology (PH) domain. PARIS-1 contains a PH domain and a TBC-type GTPase catalytic domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.16 E-value=1.4e-10 Score=76.16 Aligned_cols=68 Identities=16% Similarity=0.343 Sum_probs=47.7
Q ss_pred CCCceEEEEEEeC--CeEEEeeCCCcccCCcccceeecccceeecccccccceeeeeeeceEEEEEEeCCEEEEEeCCCC
Q psy8929 5 KHTWTKHWFVLRG--CSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPVARNFGFQITTWTKHWFVLRGCSLLYYRDPKA 82 (160)
Q Consensus 5 ~~~Wkkrwfvl~~--~~L~yy~~~~~~~~~~l~g~i~l~~~~~~~~~~~~kk~g~~~~~WkkrwfvL~~~~L~yyk~~~~ 82 (160)
.|+||||||||++ +.|+||+++.+..+ .|.|+|..+........ ++ ..|-+.+++..+++..+++
T Consensus 14 ~K~WkkRWFvL~~~~~~L~Yyk~~~d~~p---~G~I~L~~~~~~~~~~~-~~---------~~F~i~t~~r~y~l~A~s~ 80 (95)
T cd01265 14 LRGRRSRWFALDDRTCYLYYYKDSQDAKP---LGRVDLSGAAFTYDPRE-EK---------GRFEIHSNNEVIALKASSD 80 (95)
T ss_pred CcCceeEEEEEcCCCcEEEEECCCCcccc---cceEECCccEEEcCCCC-CC---------CEEEEEcCCcEEEEECCCH
Confidence 5799999999984 58999999987666 79999998654432221 11 1344566777777776665
Q ss_pred ccC
Q psy8929 83 EES 85 (160)
Q Consensus 83 ~~~ 85 (160)
.+.
T Consensus 81 ~e~ 83 (95)
T cd01265 81 KQM 83 (95)
T ss_pred HHH
Confidence 443
No 42
>cd01260 PH_CNK Connector enhancer of KSR (Kinase suppressor of ras) (CNK) pleckstrin homology (PH) domain. Connector enhancer of KSR (Kinase suppressor of ras) (CNK) pleckstrin homology (PH) domain. CNK is believed to regulate the activity and the subcellular localization of RAS activated RAF. CNK is composed of N-terminal SAM and PDZ domains along with a central or C-terminal PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskelet
Probab=99.14 E-value=1.9e-10 Score=75.37 Aligned_cols=37 Identities=35% Similarity=0.935 Sum_probs=33.0
Q ss_pred CCceEEEEEEeCCeEEEeeCCCcccCCcccceeeccccee
Q psy8929 6 HTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTS 45 (160)
Q Consensus 6 ~~Wkkrwfvl~~~~L~yy~~~~~~~~~~l~g~i~l~~~~~ 45 (160)
+.|+||||||+++.|+||+++.+..+ .|.|+|+.+..
T Consensus 18 k~WkkrwfvL~~~~L~yyk~~~~~~~---~~~I~L~~~~v 54 (96)
T cd01260 18 QKWARRWFVLKGTTLYWYRSKQDEKA---EGLIFLSGFTI 54 (96)
T ss_pred cCceeEEEEEECCEEEEECCCCCCcc---ceEEEccCCEE
Confidence 48999999999999999999987776 89999998744
No 43
>cd01257 PH_IRS Insulin receptor substrate (IRS) pleckstrin homology (PH) domain. Insulin receptor substrate (IRS) pleckstrin homology (PH) domain. PH domains are only found in eukaryotes, and are often involved in targeting proteins to the plasma membrane via lipid binding. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes. The IRS PH domain targets IRS molecules to the plasma membrane, usually in response to insulin stimulation.
Probab=99.14 E-value=1.8e-10 Score=76.22 Aligned_cols=50 Identities=26% Similarity=0.379 Sum_probs=38.5
Q ss_pred CCCCCceEEEEEEeCC------eEEEeeCCCccc--CCcccceeecccceeecccccc
Q psy8929 3 NKKHTWTKHWFVLRGC------SLLYYRDPKAEE--SGVLDGVVALNNVTSLSEVPVA 52 (160)
Q Consensus 3 ~~~~~Wkkrwfvl~~~------~L~yy~~~~~~~--~~~l~g~i~l~~~~~~~~~~~~ 52 (160)
.|.++||||||||++. .|.||++...-. ...+.|+|+|+.|..|...++.
T Consensus 9 ~K~K~~kkRwFVLr~~~~~~p~~Leyyk~ek~~~~~~~~p~~vI~L~~c~~v~~~~d~ 66 (101)
T cd01257 9 RKQKSMHKRFFVLRAESSGGPARLEYYENEKKFLQKGSAPKRVIPLESCFNINKRADA 66 (101)
T ss_pred eEecCcEeEEEEEecCCCCCCceEEEECChhhccccCCCceEEEEccceEEEeecccc
Confidence 4569999999999987 799999986411 1233799999999988755443
No 44
>cd01242 PH_ROK Rok (Rho- associated kinase) pleckstrin homology (PH) domain. Rok (Rho- associated kinase) pleckstrin homology (PH) domain. Rok is a serine/threonine kinase that binds GTP-rho. It consists of a kinase domain, a coiled coil region and a PH domain. The Rok PH domain is interrupted by a C1 domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.10 E-value=2.1e-09 Score=71.21 Aligned_cols=84 Identities=19% Similarity=0.377 Sum_probs=66.0
Q ss_pred eeceEEEEEEeCCEEEEEeCCCCccCCccceeEEcCCceeeeecCC---------CCCceEEEEeCC-CcEEEEEcCCHH
Q psy8929 60 TTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPV---------ARNFGFQITTWD-SKRTILSAVTAG 129 (160)
Q Consensus 60 ~~WkkrwfvL~~~~L~yyk~~~~~~~~~~~g~I~L~~~~~v~~~~~---------~~~~~F~i~t~~-~r~~~l~a~s~~ 129 (160)
++|.++|+||.+..|++|..+.+.....+...|+|.....|..+.. .-|+-|+|.+.+ .++.+|-|++++
T Consensus 18 ~gW~r~yvVv~~~Kl~lYd~e~~~~~~~p~~vldl~~~fhv~~V~asDVi~a~~kDiP~IF~I~~~~~~~~lllLA~s~~ 97 (112)
T cd01242 18 PGWKKQYVVVSSRKILFYNDEQDKENSTPSMILDIDKLFHVRPVTQGDVYRADAKEIPKIFQILYANEARDLLLLAPQTD 97 (112)
T ss_pred CCceEEEEEEeCCEEEEEecCccccCCCcEEEEEccceeeeecccHHHeeecCcccCCeEEEEEeCCccceEEEEeCCch
Confidence 4699999999999999999888754444577888876443343322 357889998754 489999999999
Q ss_pred HHHHHHHHHHHHhc
Q psy8929 130 IRNNWMSAIKRTAA 143 (160)
Q Consensus 130 e~~~Wi~al~~~~~ 143 (160)
|.+.|+.+|.+.|.
T Consensus 98 ek~kWV~~L~~~~~ 111 (112)
T cd01242 98 EQNKWVSRLVKKIP 111 (112)
T ss_pred HHHHHHHHHHHhcc
Confidence 99999999998763
No 45
>KOG1090|consensus
Probab=99.10 E-value=3.2e-11 Score=104.11 Aligned_cols=87 Identities=22% Similarity=0.421 Sum_probs=76.4
Q ss_pred cceeeeeeeceEEEEEEeC--CEEEEEeCCCCccCCccceeEEcCCceeeeecCC---CCCceEEEEeCCCcEEEEEcCC
Q psy8929 53 RNFGFQITTWTKHWFVLRG--CSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPV---ARNFGFQITTWDSKRTILSAVT 127 (160)
Q Consensus 53 kk~g~~~~~WkkrwfvL~~--~~L~yyk~~~~~~~~~~~g~I~L~~~~~v~~~~~---~~~~~F~i~t~~~r~~~l~a~s 127 (160)
-|+|..++.|+.|||||.+ .+|+||.+-.+..+ .|.|+|..+.++..... .++--|.+.|.+ |+|.|+|.+
T Consensus 1641 yKrGA~lK~Wk~RwFVLd~~khqlrYYd~~edt~p---kG~IdLaevesv~~~~~k~vdekgffdlktt~-rvynf~a~n 1716 (1732)
T KOG1090|consen 1641 YKRGAKLKLWKPRWFVLDPDKHQLRYYDDFEDTKP---KGCIDLAEVESVALIGPKTVDEKGFFDLKTTN-RVYNFCAQN 1716 (1732)
T ss_pred hhcchhhcccccceeEecCCccceeeecccccccc---cchhhhhhhhhhcccCccccCccceeeeehhh-HHHHHHhcc
Confidence 4567889999999999986 79999999999888 89999999988776432 567789999975 999999999
Q ss_pred HHHHHHHHHHHHHHhc
Q psy8929 128 AGIRNNWMSAIKRTAA 143 (160)
Q Consensus 128 ~~e~~~Wi~al~~~~~ 143 (160)
..++++|++.|+.+++
T Consensus 1717 in~AqqWve~iqscl~ 1732 (1732)
T KOG1090|consen 1717 INLAQQWVECIQSCLS 1732 (1732)
T ss_pred chHHHHHHHHHHHhhC
Confidence 9999999999999863
No 46
>cd01263 PH_anillin Anillin Pleckstrin homology (PH) domain. Anillin Pleckstrin homology (PH) domain. Anillin is an actin binding protein involved in cytokinesis. It has a C-terminal PH domain, which has been shown to be necessary, but not sufficient for targetting of anillin to ectopic septin containing foci . PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.05 E-value=4e-10 Score=76.92 Aligned_cols=44 Identities=25% Similarity=0.548 Sum_probs=36.8
Q ss_pred CCCCceEEEEEEeCCeEEEeeCCCcccCCcccceeecccceeec
Q psy8929 4 KKHTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLS 47 (160)
Q Consensus 4 ~~~~Wkkrwfvl~~~~L~yy~~~~~~~~~~l~g~i~l~~~~~~~ 47 (160)
..++|+||||||+++.|.||+.+.++....+.|.|+|..|....
T Consensus 15 ~~k~W~RRWFvL~g~~L~y~k~p~d~~~~~Plg~I~L~~c~~~~ 58 (122)
T cd01263 15 GFGAWHRRWCALEGGEIKYWKYPDDEKRKGPTGLIDLSTCTSSE 58 (122)
T ss_pred CCCCceEEEEEEeCCEEEEEcCCCccccCCceEEEEhhhCcccc
Confidence 46899999999999999999988875544456999999977644
No 47
>cd01235 PH_SETbf Set binding factor Pleckstrin Homology (PH) domain. Set binding factor Pleckstrin Homology (PH) domain. Set binding factor is a myotubularin-related pseudo-phosphatase consisting of a Denn domain, a Gram domain, an inactive phosphatase domain, a SID motif and a C-terminal PH domain. Its PH domain is predicted to bind lipids based upon its ability to respond to phosphatidylinositol 3-kinase .
Probab=99.01 E-value=2.3e-09 Score=70.73 Aligned_cols=43 Identities=30% Similarity=0.578 Sum_probs=35.3
Q ss_pred CCCCCceEEEEEEe--CCeEEEeeCCCcccCCcccceeecccceeecc
Q psy8929 3 NKKHTWTKHWFVLR--GCSLLYYRDPKAEESGVLDGVVALNNVTSLSE 48 (160)
Q Consensus 3 ~~~~~Wkkrwfvl~--~~~L~yy~~~~~~~~~~l~g~i~l~~~~~~~~ 48 (160)
...++||+|||||+ ++.|.||+++.+..+ .|.|+|+.+..+..
T Consensus 10 ~~~k~WkkRwFvL~~~~~~L~Yy~~~~~~~~---~g~I~L~~~~~v~~ 54 (101)
T cd01235 10 ALLKGWKPRWFVLDPDKHQLRYYDDFEDTAE---KGCIDLAEVKSVNL 54 (101)
T ss_pred CCCCCccceEEEEECCCCEEEEecCCCCCcc---ceEEEcceeEEEee
Confidence 45689999999999 459999999876665 79999998766553
No 48
>KOG2059|consensus
Probab=98.99 E-value=5.3e-10 Score=93.80 Aligned_cols=82 Identities=18% Similarity=0.332 Sum_probs=73.3
Q ss_pred eeeeceEEEEEEeCCEEEEEeCCCCccCCccceeEEcCCceeeeecCC---CCCceEEEEeCCCcEEEEEcCCHHHHHHH
Q psy8929 58 QITTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPV---ARNFGFQITTWDSKRTILSAVTAGIRNNW 134 (160)
Q Consensus 58 ~~~~WkkrwfvL~~~~L~yyk~~~~~~~~~~~g~I~L~~~~~v~~~~~---~~~~~F~i~t~~~r~~~l~a~s~~e~~~W 134 (160)
+..++|+|||.|+...|.|.|+++... .+.|+|.++..|+.++. +.+|+|+|++.+ |+.||+|.+-.|.++|
T Consensus 582 ~~~~FKKryf~LT~~~Ls~~Ksp~~q~----~~~Ipl~nI~avEklee~sF~~knv~qVV~~d-rtly~Q~~n~vEandW 656 (800)
T KOG2059|consen 582 GKKNFKKRYFRLTTEELSYAKSPGKQP----IYTIPLSNIRAVEKLEEKSFKMKNVFQVVHTD-RTLYVQAKNCVEANDW 656 (800)
T ss_pred hhhhhhheEEEeccceeEEecCCccCc----ccceeHHHHHHHHHhhhhccCCCceEEEEecC-cceeEecCCchHHHHH
Confidence 347899999999999999999998865 59999999998887655 678999999987 8999999999999999
Q ss_pred HHHHHHHhcc
Q psy8929 135 MSAIKRTAAM 144 (160)
Q Consensus 135 i~al~~~~~~ 144 (160)
+++|++....
T Consensus 657 ldaL~kvs~~ 666 (800)
T KOG2059|consen 657 LDALRKVSCC 666 (800)
T ss_pred HHHHHHHhcc
Confidence 9999997653
No 49
>PF14593 PH_3: PH domain; PDB: 1W1H_D 1W1D_A 1W1G_A 2VKI_A.
Probab=98.99 E-value=8.1e-09 Score=68.54 Aligned_cols=73 Identities=21% Similarity=0.232 Sum_probs=55.5
Q ss_pred ceEEEEEEeCC-EEEEEeCCCCccCCccceeEEcCCceeeeecCCCCCceEEEEeCCCcEEEEEcCCHHHHHHHHHHHHH
Q psy8929 62 WTKHWFVLRGC-SLLYYRDPKAEESGVLDGVVALNNVTSLSEVPVARNFGFQITTWDSKRTILSAVTAGIRNNWMSAIKR 140 (160)
Q Consensus 62 WkkrwfvL~~~-~L~yyk~~~~~~~~~~~g~I~L~~~~~v~~~~~~~~~~F~i~t~~~r~~~l~a~s~~e~~~Wi~al~~ 140 (160)
.++|+|+|+++ .|+|+......- .|.|+++....++.. ....|.|.||+ |+|+|.. .+..+..|+++|+.
T Consensus 27 ~kkR~liLTd~PrL~Yvdp~~~~~----KGeI~~~~~l~v~~k---~~~~F~I~tp~-RtY~l~d-~~~~A~~W~~~I~~ 97 (104)
T PF14593_consen 27 AKKRQLILTDGPRLFYVDPKKMVL----KGEIPWSKELSVEVK---SFKTFFIHTPK-RTYYLED-PEGNAQQWVEAIEE 97 (104)
T ss_dssp EEEEEEEEETTTEEEEEETTTTEE----EEEE--STT-EEEEC---SSSEEEEEETT-EEEEEE--TTS-HHHHHHHHHH
T ss_pred EEEEEEEEccCCEEEEEECCCCeE----CcEEecCCceEEEEc---cCCEEEEECCC-cEEEEEC-CCCCHHHHHHHHHH
Confidence 89999999997 888877666543 699999988777764 33599999995 9999966 66678999999998
Q ss_pred Hhc
Q psy8929 141 TAA 143 (160)
Q Consensus 141 ~~~ 143 (160)
+..
T Consensus 98 ~~~ 100 (104)
T PF14593_consen 98 VKK 100 (104)
T ss_dssp HHH
T ss_pred HHH
Confidence 765
No 50
>cd01244 PH_RasGAP_CG9209 RAS_GTPase activating protein (GAP)_CG9209 pleckstrin homology (PH) domain. RAS_GTPase activating protein (GAP)_CG9209 pleckstrin homology (PH) domain. This protein consists of two C2 domains, followed by a RasGAP domain, a PH domain and a BTK domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=98.98 E-value=2.3e-09 Score=70.63 Aligned_cols=43 Identities=14% Similarity=0.257 Sum_probs=35.6
Q ss_pred CCCceEEEEEEeCCeEEEeeCCCcccCCcccceeecccceeeccccc
Q psy8929 5 KHTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPV 51 (160)
Q Consensus 5 ~~~Wkkrwfvl~~~~L~yy~~~~~~~~~~l~g~i~l~~~~~~~~~~~ 51 (160)
+++||||||||++..|+||+++.. .+.|.|||+.+..+...+.
T Consensus 18 ~~n~KkRwF~Lt~~~L~Y~k~~~~----~~~g~I~L~~i~~ve~v~~ 60 (98)
T cd01244 18 VLHFKKRYFQLTTTHLSWAKDVQC----KKSALIKLAAIKGTEPLSD 60 (98)
T ss_pred CcCCceeEEEECCCEEEEECCCCC----ceeeeEEccceEEEEEcCC
Confidence 679999999999999999998752 3369999999887765544
No 51
>cd01239 PH_PKD Protein kinase D (PKD/PKCmu) pleckstrin homology (PH) domain. Protein kinase D (PKD/PKCmu) pleckstrin homology (PH) domain. PKD consists of 2 C1 domains, followed by a PH domain and a kinase domain. While the PKD PH domain has not been shown to bind phosphorylated inositol lipids and is not required for membrane translocation, it is required for nuclear export. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.98 E-value=4.5e-09 Score=70.06 Aligned_cols=78 Identities=17% Similarity=0.263 Sum_probs=64.9
Q ss_pred eeceEEEEEEeCCEEEEEeCCCCccCCccceeEEcCCceeeeecCC------CCCceEEEEeCCCcEEEEEcC-------
Q psy8929 60 TTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPV------ARNFGFQITTWDSKRTILSAV------- 126 (160)
Q Consensus 60 ~~WkkrwfvL~~~~L~yyk~~~~~~~~~~~g~I~L~~~~~v~~~~~------~~~~~F~i~t~~~r~~~l~a~------- 126 (160)
+.|||+|++|....|.+|.++..+.. -..|+|..+..|+.... ..++||+|.|.+ .+||...+
T Consensus 14 ~~rKRhYWrLDsK~Itlf~~e~~sky---yKeIPLsEIl~V~~~~~~~~~~~~~~hcFEi~T~~-~vY~VG~~~~~~~~~ 89 (117)
T cd01239 14 NRRKKHYWRLDSKAITLYQEESGSRY---YKEIPLAEILSVSSNNGDSVLAKHPPHCFEIRTTT-NVYFVGGEDYHAFSG 89 (117)
T ss_pred cceeeeEEEecCCeEEEEEcCCCCee---eEEeehHHheEEeccCCCcCCCCCCCcEEEEEecC-EEEEecccccccCCC
Confidence 67899999999999999999998887 89999999998875422 478999999975 88888553
Q ss_pred -------------CHHHHHHHHHHHHHH
Q psy8929 127 -------------TAGIRNNWMSAIKRT 141 (160)
Q Consensus 127 -------------s~~e~~~Wi~al~~~ 141 (160)
..+....|-.||++|
T Consensus 90 ~~~~~~~~~~sg~g~~~a~~We~aI~qA 117 (117)
T cd01239 90 GPPKKIPPSDSGRGSDNAQSWETAIRQA 117 (117)
T ss_pred cccCCCCcccccchhHHHHHHHHHHhcC
Confidence 345678899999874
No 52
>cd01218 PH_phafin2 Phafin2 Pleckstrin Homology (PH) domain. Phafin2 Pleckstrin Homology (PH) domain. Phafin contains a PH domain and a FYVE domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=98.96 E-value=1.4e-08 Score=67.58 Aligned_cols=82 Identities=18% Similarity=0.188 Sum_probs=61.5
Q ss_pred eeceEEEEEEeCCEEEEEeCCCCccCCccceeEEcCCceeeeecCC--CCCceEEEEeCCCcEEEEEcCCHHHHHHHHHH
Q psy8929 60 TTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPV--ARNFGFQITTWDSKRTILSAVTAGIRNNWMSA 137 (160)
Q Consensus 60 ~~WkkrwfvL~~~~L~yyk~~~~~~~~~~~g~I~L~~~~~v~~~~~--~~~~~F~i~t~~~r~~~l~a~s~~e~~~Wi~a 137 (160)
+.-+.|+|.|=.+.|.|-+-......=...+.|+|.++. |....+ .-+++|.|.++. +.|.++|+|++|..+||++
T Consensus 16 k~~~~R~ffLFnD~LvY~~~~~~~~~~~~~~~i~L~~~~-v~~~~d~~~~~n~f~I~~~~-kSf~v~A~s~~eK~eWl~~ 93 (104)
T cd01218 16 KKPKQRQFFLFNDILVYGNIVISKKKYNKQHILPLEGVQ-VESIEDDGIERNGWIIKTPT-KSFAVYAATETEKREWMLH 93 (104)
T ss_pred CCCceEEEEEecCEEEEEEeecCCceeeEeeEEEccceE-EEecCCcccccceEEEecCC-eEEEEEcCCHHHHHHHHHH
Confidence 445668999988888885431110000125889999988 444443 357999999986 8999999999999999999
Q ss_pred HHHHhc
Q psy8929 138 IKRTAA 143 (160)
Q Consensus 138 l~~~~~ 143 (160)
|+.|+.
T Consensus 94 i~~ai~ 99 (104)
T cd01218 94 INKCVT 99 (104)
T ss_pred HHHHHH
Confidence 999986
No 53
>cd01266 PH_Gab Gab (Grb2-associated binder) pleckstrin homology (PH) domain. Gab (Grb2-associated binder) pleckstrin homology (PH) domain. The Gab subfamily includes several Gab proteins, Drosophila DOS and C. elegans SOC-1. They are scaffolding adaptor proteins, which possess N-terminal PH domains and a C-terminus with proline-rich regions and multiple phosphorylation sites. Following activation of growth factor receptors, Gab proteins are tyrosine phosphorylated and activate PI3K, which generates 3-phosphoinositide lipids. By binding to these lipids via the PH domain, Gab proteins remain in proximity to the receptor, leading to further signaling. While not all Gab proteins depend on the PH domain for recruitment, it is required for Gab activity. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display str
Probab=98.92 E-value=6.1e-09 Score=69.83 Aligned_cols=40 Identities=23% Similarity=0.555 Sum_probs=33.6
Q ss_pred CCCceEEEEEEeCCe-------EEEeeCCCcccCCcccceeecccceeec
Q psy8929 5 KHTWTKHWFVLRGCS-------LLYYRDPKAEESGVLDGVVALNNVTSLS 47 (160)
Q Consensus 5 ~~~Wkkrwfvl~~~~-------L~yy~~~~~~~~~~l~g~i~l~~~~~~~ 47 (160)
.++||||||||+++. |.||+++.+.++ .|.|+|+.+..+.
T Consensus 16 ~~~WkrRwFvL~~~~l~~~~~~L~Yyk~~~~~k~---~g~I~L~~~~~v~ 62 (108)
T cd01266 16 RTKWVRRYFVLHCGDRERNLFALEYYKTSRKFKL---EFVIDLESCSQVD 62 (108)
T ss_pred ccCcEEEEEEEeccccCCCcceEEEECCCCCCcc---ceEEECCccEEEc
Confidence 359999999999876 599999877766 8999999976543
No 54
>cd01252 PH_cytohesin Cytohesin Pleckstrin homology (PH) domain. Cytohesin Pleckstrin homology (PH) domain. Cytohesin is an ARF-Guanine nucleotide Exchange Factor (GEF), which has a Sec7-type Arf-GEFdomain and a pleckstrin homology domain. It specifically binds phosphatidylinositol-3,4,5-trisphosphate (PtdIns(3,4, 5)P3) via its PH domain and it acts as a PI 3-kinase effector mediating biological responses such as cell adhesion and membrane trafficking. PH domains are only found in eukaryotes. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.91 E-value=4.9e-09 Score=72.03 Aligned_cols=38 Identities=32% Similarity=0.826 Sum_probs=33.4
Q ss_pred CCCCceEEEEEEeCCeEEEeeCCCcccCCcccceeecccce
Q psy8929 4 KKHTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVT 44 (160)
Q Consensus 4 ~~~~Wkkrwfvl~~~~L~yy~~~~~~~~~~l~g~i~l~~~~ 44 (160)
..++||+|||||+++.|+||+++.+..+ .|.|+|+++.
T Consensus 12 ~~~~WkkRwfvL~~~~L~yyk~~~~~~~---~g~I~L~~~~ 49 (125)
T cd01252 12 RVKTWKRRWFILTDNCLYYFEYTTDKEP---RGIIPLENVS 49 (125)
T ss_pred CCCCeEeEEEEEECCEEEEEcCCCCCCc---eEEEECCCcE
Confidence 3588999999999999999999877666 8999999765
No 55
>cd01259 PH_Apbb1ip Apbb1ip (Amyloid beta (A4) Precursor protein-Binding, family B, member 1 Interacting Protein) pleckstrin homology (PH) domain. Apbb1ip (Amyloid beta (A4) Precursor protein-Binding, family B, member 1 Interacting Protein) pleckstrin homology (PH) domain. Apbb1ip consists of a Ras-associated domain and a PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.89 E-value=9.8e-09 Score=68.17 Aligned_cols=83 Identities=20% Similarity=0.355 Sum_probs=60.1
Q ss_pred eeeeceEEEEEEeCCEEEEEeCCCCccCCccceeEEcCCceeeeecCC-------CCCceEEEEeCCC------cEEEEE
Q psy8929 58 QITTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPV-------ARNFGFQITTWDS------KRTILS 124 (160)
Q Consensus 58 ~~~~WkkrwfvL~~~~L~yyk~~~~~~~~~~~g~I~L~~~~~v~~~~~-------~~~~~F~i~t~~~------r~~~l~ 124 (160)
+.+.||++||+|+..-|+|+...+..++..+....++++.. |..... ..+++|.|..+.. -..+||
T Consensus 12 gkKsWKk~~f~LR~SGLYy~~Kgksk~srdL~cl~~f~~~n-vY~~~~~kKk~kAPTd~~F~~K~~~~q~~~s~~ik~lC 90 (114)
T cd01259 12 GKKSWKKYYFVLRSSGLYYFPKEKTKNTRDLACLNLLHGHN-VYTGLGWRKKYKSPTDYCFGFKAVGDQSKGSQSIKYLC 90 (114)
T ss_pred CCccceEEEEEEeCCeeEEccCCCcCCHHHHHHHHhcccCc-EEEEechhhccCCCCCceEEEeccccCcccchhheeec
Confidence 45789999999999999998877765553334445556554 332211 3568998864321 266899
Q ss_pred cCCHHHHHHHHHHHHHH
Q psy8929 125 AVTAGIRNNWMSAIKRT 141 (160)
Q Consensus 125 a~s~~e~~~Wi~al~~~ 141 (160)
|++++.+..||.||+-+
T Consensus 91 aeDe~t~~~W~ta~Ri~ 107 (114)
T cd01259 91 AEDLPTLDRWLTAIRIA 107 (114)
T ss_pred cCCHHHHHHHHHHHHHH
Confidence 99999999999999865
No 56
>cd01261 PH_SOS Son of Sevenless (SOS) Pleckstrin homology (PH) domain. Son of Sevenless (SOS) Pleckstrin homology (PH) domain. SOS is a Ras guanine nucleotide exchange factor. It has a RhoGEF (DbH) domain, a PH domain, and a RasGEF domain. The SOS PH domain can bind to inositol 1,4,5-triphosphate. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.88 E-value=5.1e-08 Score=65.61 Aligned_cols=84 Identities=19% Similarity=0.252 Sum_probs=63.9
Q ss_pred eeeceEEEEEEeCCEEEEEeCCCCcc--------CCccceeEEcCCceeeeecCC--CCCceEEEEeCCCcEEEEEcCCH
Q psy8929 59 ITTWTKHWFVLRGCSLLYYRDPKAEE--------SGVLDGVVALNNVTSLSEVPV--ARNFGFQITTWDSKRTILSAVTA 128 (160)
Q Consensus 59 ~~~WkkrwfvL~~~~L~yyk~~~~~~--------~~~~~g~I~L~~~~~v~~~~~--~~~~~F~i~t~~~r~~~l~a~s~ 128 (160)
.+..+.|+|.|=++.|.|.+...... .=...+.|+|..+. |...++ .-+++|.|.+.+++.+.|+|.|+
T Consensus 17 ~~~~q~R~~FLFd~~Li~CK~~~~~~~~~g~~~~~y~~k~~~~l~~~~-V~d~~d~~~~knaF~I~~~~~~s~~l~Akt~ 95 (112)
T cd01261 17 KKAKHERHVFLFDGLMVLCKSNHGQPRLPGASSAEYRLKEKFFMRKVD-INDKPDSSEYKNAFEIILKDGNSVIFSAKNA 95 (112)
T ss_pred cCCcceEEEEEecCeEEEEEeccCcccccccccceEEEEEEEeeeeeE-EEEcCCCcccCceEEEEcCCCCEEEEEECCH
Confidence 35677899999999999988544311 01224668888877 444444 34799999986568999999999
Q ss_pred HHHHHHHHHHHHHhc
Q psy8929 129 GIRNNWMSAIKRTAA 143 (160)
Q Consensus 129 ~e~~~Wi~al~~~~~ 143 (160)
+|..+||++|..++.
T Consensus 96 eeK~~Wm~~l~~~~~ 110 (112)
T cd01261 96 EEKNNWMAALISVQT 110 (112)
T ss_pred HHHHHHHHHHHHHhc
Confidence 999999999998874
No 57
>cd01243 PH_MRCK MRCK (myotonic dystrophy-related Cdc42-binding kinase) pleckstrin homology (PH) domain. MRCK (myotonic dystrophy-related Cdc42-binding kinase) pleckstrin homology (PH) domain. MRCK consists of a serine/threonine kinase domain, a cysteine rich (C1) region, a PH domain and a p21 binding motif. It has been shown to promote cytoskeletal reorganization, which affects many biological processes. The MRCK PH domain is responsible for its targeting to cell to cell junctions. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.88 E-value=4.8e-08 Score=65.72 Aligned_cols=83 Identities=22% Similarity=0.286 Sum_probs=60.8
Q ss_pred eeeceEEEEEEeCCEEEEEeCCCCccC---CccceeEEcC-CceeeeecCC---------CCCceEEEEeC------CCc
Q psy8929 59 ITTWTKHWFVLRGCSLLYYRDPKAEES---GVLDGVVALN-NVTSLSEVPV---------ARNFGFQITTW------DSK 119 (160)
Q Consensus 59 ~~~WkkrwfvL~~~~L~yyk~~~~~~~---~~~~g~I~L~-~~~~v~~~~~---------~~~~~F~i~t~------~~r 119 (160)
.++|.++|+||.+..|++|..+.+... ..+.-.|+|. ....|..+.. .-|+-|+|.+. .+.
T Consensus 17 krGW~r~~vVv~~~Kl~lYd~e~~k~~~p~~~~~~vLdlrD~~fsV~~VtasDvi~a~~kDiP~If~I~~~~~~~~~~~~ 96 (122)
T cd01243 17 KKGWQRALVVVCDFKLFLYDIAEDRASQPSVVISQVLDMRDPEFSVSSVLESDVIHASKKDIPCIFRVTTSQISASSSKC 96 (122)
T ss_pred ccCceEEEEEEeCCEEEEEeCCccccCCccCceeEEEEcCCCCEEEEEecHHHccccCcccCCeEEEEEEecccCCCCcc
Confidence 357999999999999999997775322 2234567783 4333544322 35788999852 246
Q ss_pred EEEEEcCCHHHHHHHHHHHHHH
Q psy8929 120 RTILSAVTAGIRNNWMSAIKRT 141 (160)
Q Consensus 120 ~~~l~a~s~~e~~~Wi~al~~~ 141 (160)
+.+|-|+|+.|.+.|+.||...
T Consensus 97 ~~~~lA~s~~eK~kWV~aL~~l 118 (122)
T cd01243 97 STLMLADTEEEKSKWVGALSEL 118 (122)
T ss_pred EEEEEeCCchHHHHHHHHHHHH
Confidence 8999999999999999999874
No 58
>cd01237 Unc112 Unc-112 pleckstrin homology (PH) domain. Unc-112 pleckstrin homology (PH) domain. Unc-112 and related proteins contain two FERM domains with a PH domain between them. Both the PH and FERM domains have a PH-like fold. The FERM domains are likely responsible for the role of Unc-112 in organizing beta-integrin. The specific role of the Unc-112 PH domain is not known, but it is predicted to be involved in mediating membrane interactions. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.73 E-value=2.5e-08 Score=65.99 Aligned_cols=42 Identities=19% Similarity=0.443 Sum_probs=30.4
Q ss_pred CCCceEEEEEEeCCeEEEeeCCCcccCCcccceeecccceeec
Q psy8929 5 KHTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLS 47 (160)
Q Consensus 5 ~~~Wkkrwfvl~~~~L~yy~~~~~~~~~~l~g~i~l~~~~~~~ 47 (160)
.+.||||||+|+|..|.||++..+... ...+.|+|..|+...
T Consensus 17 ~K~~KrrwF~lk~~~L~YyK~kee~~~-~p~i~lnl~gcev~~ 58 (106)
T cd01237 17 LKGYKQYWFTFRDTSISYYKSKEDSNG-APIGQLNLKGCEVTP 58 (106)
T ss_pred hhhheeEEEEEeCCEEEEEccchhcCC-CCeEEEecCceEEcc
Confidence 467999999999999999998765443 223555666655433
No 59
>KOG0248|consensus
Probab=98.71 E-value=1.3e-08 Score=85.46 Aligned_cols=139 Identities=14% Similarity=0.262 Sum_probs=97.2
Q ss_pred CCCCCCCceEEEEEEeCCeEEEeeCCCcccCCcccceeecccceeeccccc-----------------------------
Q psy8929 1 MLNKKHTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPV----------------------------- 51 (160)
Q Consensus 1 ~~~~~~~Wkkrwfvl~~~~L~yy~~~~~~~~~~l~g~i~l~~~~~~~~~~~----------------------------- 51 (160)
|..+.+.|||||||++++..+||+.+.++...+. +.||+++...+.....
T Consensus 258 ~~s~~k~lkrr~~v~k~gqi~~y~~~~~~~~~p~-s~~d~~s~~~~~~~~~s~~fqli~~t~~~~~~~~s~~lt~dw~~i 336 (936)
T KOG0248|consen 258 LTSRIKSLKRRYVVFKNGQISFYRKHNNRDEEPA-SKIDIRSVTKLEQQGAAYAFQLITSTDKMNFMTESERTTHDWVTI 336 (936)
T ss_pred chHHHHHHHhHheeeccceEEEEEcCCCcccccc-CcccccccceeeccchhHHhhhhhhceeEEEeccChhhhhhhHHH
Confidence 4567899999999999999999999988776554 8888887554442221
Q ss_pred --------------ccc-------eee----eeeeceEEEEEEeCCEEEEEeCCCCccCCccceeEEcCCceeeeecCC-
Q psy8929 52 --------------ARN-------FGF----QITTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPV- 105 (160)
Q Consensus 52 --------------~kk-------~g~----~~~~WkkrwfvL~~~~L~yyk~~~~~~~~~~~g~I~L~~~~~v~~~~~- 105 (160)
.+. .|. ....-++.|+.|.+.+++||++..+..+ .|...+.....+++...
T Consensus 337 L~~~iKv~~~~~~a~~~~p~~~~~~GwlT~vk~g~skkv~~alv~~~~~~~k~~~d~rp---~g~l~~~~~h~~ee~~s~ 413 (936)
T KOG0248|consen 337 LSAAIKATTLREMASRVTPIDASISGWLTRVKCGLSKKVFAALVNQKLMFFKNSNDLVP---NGFLCLQEKHNGTEEYSG 413 (936)
T ss_pred HHHHHHHHhccchhhhcCCCCCCcCcceeeeccccceeeeeeeeeeeeEEeeccccccc---ccccchhhhhcceeeccC
Confidence 000 011 1234578899999999999999998777 67766654443333211
Q ss_pred --------------CCCceEEEEeC-CCcEEEEEcCCHHHHHHHHHHHHHHhc
Q psy8929 106 --------------ARNFGFQITTW-DSKRTILSAVTAGIRNNWMSAIKRTAA 143 (160)
Q Consensus 106 --------------~~~~~F~i~t~-~~r~~~l~a~s~~e~~~Wi~al~~~~~ 143 (160)
...++.-|+.+ ++-++||...+.++.+.|+..+..|.+
T Consensus 414 ~sde~~e~~~~r~l~~~~~~l~~~~~~~~p~yLi~~t~e~k~~wly~l~~A~g 466 (936)
T KOG0248|consen 414 SSDEQLETTKEHPQRKNNDSLCVQIANEDPVYLILRTSEDKEKWLYYLKSASG 466 (936)
T ss_pred CchhhhhhhcCccccccCceEEeccCCCCCEEEEeeeccccceeeeeehhhcc
Confidence 23455555543 356899999999999999998887655
No 60
>cd01234 PH_CADPS CADPS (Ca2+-dependent activator protein) Pleckstrin homology (PH) domain. CADPS (Ca2+-dependent activator protein) Pleckstrin homology (PH) domain. CADPS is a calcium-dependent activator involved in secretion. It contains a central PH domain that binds to phosphoinositide 4,5 bisphosphate containing liposomes. However, membrane association may also be mediated by binding to phosphatidlyserine via general electrostatic interactions. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.69 E-value=2.2e-08 Score=65.50 Aligned_cols=81 Identities=23% Similarity=0.360 Sum_probs=58.6
Q ss_pred eeeeeceEEEEEEeCCEE-----EEEeCCCCccCCccceeEEcCCceeeeecCC------------CCCceEEEEeCCCc
Q psy8929 57 FQITTWTKHWFVLRGCSL-----LYYRDPKAEESGVLDGVVALNNVTSLSEVPV------------ARNFGFQITTWDSK 119 (160)
Q Consensus 57 ~~~~~WkkrwfvL~~~~L-----~yyk~~~~~~~~~~~g~I~L~~~~~v~~~~~------------~~~~~F~i~t~~~r 119 (160)
...+.||+|||+|.+-+- +-|+..+. +| ...|.|.+.+ |.-++. +..+-|..+-. |-
T Consensus 14 ~~~KkWKKRwFvL~qvsQYtfamcsy~ekks-~P---~e~~qldGyT-vDy~~~~~~~~~~~~~~~gg~~ff~avke-gd 87 (117)
T cd01234 14 NVWKKWKKRFFVLVQVSQYTFAMCSYREKKA-EP---TEFIQLDGYT-VDYMPESDPDPNSELSLQGGRHFFNAVKE-GD 87 (117)
T ss_pred hhhhhhheeEEEEEchhHHHHHHHhhhhhcC-Cc---hhheeecceE-EeccCCCCCCcccccccccchhhhheecc-Cc
Confidence 378999999999997443 33444443 33 5778999998 444322 23455666654 46
Q ss_pred EEEEEcCCHHHHHHHHHHHHHHhc
Q psy8929 120 RTILSAVTAGIRNNWMSAIKRTAA 143 (160)
Q Consensus 120 ~~~l~a~s~~e~~~Wi~al~~~~~ 143 (160)
...|.++++.|+..||+||-.|.+
T Consensus 88 ~~~fa~~de~~r~lwvqa~yratg 111 (117)
T cd01234 88 ELKFATDDENERHLWVQAMYRATG 111 (117)
T ss_pred EEEEeccchHHHHHHHHHHHHHcC
Confidence 899999999999999999998865
No 61
>cd01249 PH_oligophrenin Oligophrenin Pleckstrin homology (PH) domain. Oligophrenin Pleckstrin homology (PH) domain. Oligophrenin is composed of a PH domain, a rhoGAP domain and a proline rich region. Closely related proteins have a C-terminal SH3 domain. PH domains a share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=98.61 E-value=5.5e-07 Score=59.47 Aligned_cols=80 Identities=15% Similarity=0.295 Sum_probs=52.5
Q ss_pred eeeceEEEEEEeCC--EEEE--EeCCC--CccCCc-cceeEEcCCceeeeecCC-CCCceEEEEeCCC-cEEEEEcCCHH
Q psy8929 59 ITTWTKHWFVLRGC--SLLY--YRDPK--AEESGV-LDGVVALNNVTSLSEVPV-ARNFGFQITTWDS-KRTILSAVTAG 129 (160)
Q Consensus 59 ~~~WkkrwfvL~~~--~L~y--yk~~~--~~~~~~-~~g~I~L~~~~~v~~~~~-~~~~~F~i~t~~~-r~~~l~a~s~~ 129 (160)
...|.+.||...++ .+.+ +.... +..... -.-.|.|..|. +.+.+. .|.+||+|++++. .++.|+|+|+.
T Consensus 14 ~~~Wvk~y~~~~~~~~~f~m~~~~q~s~~~~~g~v~~~e~~~l~sc~-~r~~~~~dRRFCFei~~~~~~~~~~lQA~Se~ 92 (104)
T cd01249 14 GGSWTKYYCTYSKETRIFTMVPFNQKTKTDMKGAVAQDETLTLKSCS-RRKTESIDKRFCFDVEVEEKPGVITMQALSEK 92 (104)
T ss_pred CCeEEEEEEEEEcCCcEEEEEecccccccccCcccccceEEeeeecc-ccccCCccceeeEeeeecCCCCeEEEEecCHH
Confidence 34799999988763 3221 22211 101100 02447777777 455444 7899999988762 28999999999
Q ss_pred HHHHHHHHHH
Q psy8929 130 IRNNWMSAIK 139 (160)
Q Consensus 130 e~~~Wi~al~ 139 (160)
++..||.||.
T Consensus 93 ~~~~Wi~A~d 102 (104)
T cd01249 93 DRRLWIEAMD 102 (104)
T ss_pred HHHHHHHhhc
Confidence 9999999984
No 62
>cd01254 PH_PLD Phospholipase D (PLD) pleckstrin homology (PH) domain. Phospholipase D (PLD) pleckstrin homology (PH) domain. PLD hydrolyzes phosphatidylcholine to phosphatidic acid (PtdOH), which can bind target proteins. PLD contains a PH domain, a PX domain and four conserved PLD signature domains. The PLD PH domain is specific for bisphosphorylated inositides. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.60 E-value=1.8e-07 Score=64.01 Aligned_cols=39 Identities=23% Similarity=0.583 Sum_probs=31.5
Q ss_pred CCceEEEEEEeCCeEEEeeCCCcccCCcccceeecccceeec
Q psy8929 6 HTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLS 47 (160)
Q Consensus 6 ~~Wkkrwfvl~~~~L~yy~~~~~~~~~~l~g~i~l~~~~~~~ 47 (160)
.+|++|||||+++.|+||+++.+..+ .|+|.+.....+.
T Consensus 31 ~~w~kRWFvlr~s~L~Y~~~~~~~~~---~~vil~D~~f~v~ 69 (121)
T cd01254 31 DRWQKRWFIVKESFLAYMDDPSSAQI---LDVILFDVDFKVN 69 (121)
T ss_pred cCCcceeEEEeCCEEEEEcCCCCCce---eeEEEEcCCccEE
Confidence 47999999999999999999977555 6888886544443
No 63
>cd01246 PH_oxysterol_bp Oxysterol binding protein (OSBP) Pleckstrin homology (PH) domain. Oxysterol binding protein (OSBP) Pleckstrin homology (PH) domain. Oxysterol binding proteins are a multigene family that is conserved in yeast, flies, worms, mammals and plants. They all contain a C-terminal oxysterol binding domain, and most contain an N-terminal PH domain. OSBP PH domains bind to membrane phosphoinositides and thus likely play an important role in intracellular targeting. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.60 E-value=2.6e-07 Score=59.36 Aligned_cols=40 Identities=30% Similarity=0.630 Sum_probs=32.7
Q ss_pred CCCCceEEEEEEeCCeEEEeeCCCcccCCcccceeecccce
Q psy8929 4 KKHTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVT 44 (160)
Q Consensus 4 ~~~~Wkkrwfvl~~~~L~yy~~~~~~~~~~l~g~i~l~~~~ 44 (160)
..+.|++|||||+++.|.||+++.... ..+.|.|+|..+.
T Consensus 11 ~~~~W~~r~~vl~~~~L~~~~~~~~~~-~~~~~~i~l~~~~ 50 (91)
T cd01246 11 YLKGWQKRWFVLDNGLLSYYKNKSSMR-GKPRGTILLSGAV 50 (91)
T ss_pred cCCCceeeEEEEECCEEEEEecCccCC-CCceEEEEeceEE
Confidence 357899999999999999999987642 2337999999864
No 64
>cd01241 PH_Akt Akt pleckstrin homology (PH) domain. Akt pleckstrin homology (PH) domain. Akt (Protein Kinase B (PKB)) is a phosphatidylinositol 3'-kinase (PI3K)-dependent Ser/Thr kinase. The PH domain recruits Akt to the plasma membrane by binding to phosphoinositides (PtdIns-3,4-P2) and is required for activation. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.60 E-value=1.5e-07 Score=62.47 Aligned_cols=37 Identities=24% Similarity=0.488 Sum_probs=27.0
Q ss_pred CCCCceEEEEEEe-CCeEEEeeCCCcccCCcccceeecccc
Q psy8929 4 KKHTWTKHWFVLR-GCSLLYYRDPKAEESGVLDGVVALNNV 43 (160)
Q Consensus 4 ~~~~Wkkrwfvl~-~~~L~yy~~~~~~~~~~l~g~i~l~~~ 43 (160)
..++||+|||||+ ++.|+||++...... .|.|+|...
T Consensus 13 ~~~~Wk~R~f~L~~~~~l~~yk~~~~~~~---~~~i~l~~~ 50 (102)
T cd01241 13 YIKTWRPRYFLLKSDGSFIGYKEKPEDGD---PFLPPLNNF 50 (102)
T ss_pred CCCCCeeEEEEEeCCCeEEEEecCCCccC---ccccccCCe
Confidence 4689999999999 889999987643222 256666653
No 65
>cd01245 PH_RasGAP_CG5898 RAS GTPase-activating protein (GAP) CG5898 Pleckstrin homology (PH) domain. RAS GTPase-activating protein (GAP) CG5898 Pleckstrin homology (PH) domain. This protein has a domain architecture of SH2-SH3-SH2-PH-C2-Ras_GAP. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=98.57 E-value=1e-07 Score=62.66 Aligned_cols=36 Identities=19% Similarity=0.391 Sum_probs=32.4
Q ss_pred CCCceEEEEEEeC----CeEEEeeCCCcccCCcccceeecccc
Q psy8929 5 KHTWTKHWFVLRG----CSLLYYRDPKAEESGVLDGVVALNNV 43 (160)
Q Consensus 5 ~~~Wkkrwfvl~~----~~L~yy~~~~~~~~~~l~g~i~l~~~ 43 (160)
.|+||+|||+|.+ ..|+||+++.+.++ .|.|+|..+
T Consensus 13 ~K~wK~rwF~l~~~~s~~~l~yf~~~~~~~p---~gli~l~~~ 52 (98)
T cd01245 13 TKLWKTLYFALILDGSRSHESLLSSPKKTKP---IGLIDLSDA 52 (98)
T ss_pred ccccceeEEEEecCCCCceEEEEcCCCCCCc---cceeecccc
Confidence 6889999999987 99999999988766 799999987
No 66
>KOG0521|consensus
Probab=98.56 E-value=6.5e-08 Score=84.13 Aligned_cols=85 Identities=21% Similarity=0.360 Sum_probs=71.1
Q ss_pred ceeeeeeeceEEEEEEeCCEEEEEeCCCCccCCccceeEEcCCceeeeecCC--CCCceEEEEeCCCcEEEEEcCCHHHH
Q psy8929 54 NFGFQITTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPV--ARNFGFQITTWDSKRTILSAVTAGIR 131 (160)
Q Consensus 54 k~g~~~~~WkkrwfvL~~~~L~yyk~~~~~~~~~~~g~I~L~~~~~v~~~~~--~~~~~F~i~t~~~r~~~l~a~s~~e~ 131 (160)
+.+...+.|.+|||-..++.+.|+..-.+... ...++|..|. |...+. .+.+||+|++++ ++|.|+|+++.+.
T Consensus 283 k~~~~~~tw~r~~f~~q~~~l~~~~r~~~~~~---~~~~dL~~cs-vk~~~~~~drr~CF~iiS~t-ks~~lQAes~~d~ 357 (785)
T KOG0521|consen 283 KASNASKTWKRRWFSIQDGQLGYQHRGADAEN---VLIEDLRTCS-VKPDAEQRDRRFCFEIISPT-KSYLLQAESEKDC 357 (785)
T ss_pred hcccchhhHHhhhhhhhccccccccccccccc---cccccchhcc-ccCCcccccceeeEEEecCC-cceEEecCchhHH
Confidence 33456899999999999999999888777663 3677888888 444443 589999999986 8999999999999
Q ss_pred HHHHHHHHHHhc
Q psy8929 132 NNWMSAIKRTAA 143 (160)
Q Consensus 132 ~~Wi~al~~~~~ 143 (160)
..||.+|+.++.
T Consensus 358 ~~Wi~~i~nsi~ 369 (785)
T KOG0521|consen 358 QDWISALQNSIL 369 (785)
T ss_pred HHHHHHHHHHHH
Confidence 999999999887
No 67
>KOG0930|consensus
Probab=98.55 E-value=1.2e-07 Score=72.36 Aligned_cols=39 Identities=31% Similarity=0.824 Sum_probs=33.9
Q ss_pred CCCCCceEEEEEEeCCeEEEeeCCCcccCCcccceeecccce
Q psy8929 3 NKKHTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVT 44 (160)
Q Consensus 3 ~~~~~Wkkrwfvl~~~~L~yy~~~~~~~~~~l~g~i~l~~~~ 44 (160)
+..+.||||||+|++.+|+||.-..+.++ .|.|+|.+..
T Consensus 272 ~rvktWKrRWFiLtdNCLYYFe~tTDKEP---rGIIpLeNls 310 (395)
T KOG0930|consen 272 NRVKTWKRRWFILTDNCLYYFEYTTDKEP---RGIIPLENLS 310 (395)
T ss_pred CcccchhheeEEeecceeeeeeeccCCCC---Ccceeccccc
Confidence 46789999999999999999998877677 7999998843
No 68
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=98.54 E-value=2.7e-07 Score=76.57 Aligned_cols=84 Identities=24% Similarity=0.358 Sum_probs=58.3
Q ss_pred eeceEEEEEEeCCEEEEEeCCCCccCCccceeEEcCCceeeeecC----CCCCceEEEEeCCCcEEEEEcCCHHHHHHHH
Q psy8929 60 TTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVP----VARNFGFQITTWDSKRTILSAVTAGIRNNWM 135 (160)
Q Consensus 60 ~~WkkrwfvL~~~~L~yyk~~~~~~~~~~~g~I~L~~~~~v~~~~----~~~~~~F~i~t~~~r~~~l~a~s~~e~~~Wi 135 (160)
..|++|||.+.++.+...........+.....+.+.....+.+++ ..++++|.|.+.+++.++|.|+|++|+++||
T Consensus 390 ~~wk~ry~~l~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~v~pv~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~W~ 469 (478)
T PTZ00267 390 MRWKKRYFYIGNGQLRISLSENPENDGVAPKSVNLETVNDVFPVPEVYSQKHPNQLVLWFNNGQKIIAYAKTAEDRDQWI 469 (478)
T ss_pred cchhhheEEecCCceEEEeccccccCCCCCccccHHHhcccccccHHhcCCCCceEEEEecCCcEEEEecCChHHHHHHH
Confidence 359999999998776664332221111112334444444444442 2578999999877889999999999999999
Q ss_pred HHHHHHhc
Q psy8929 136 SAIKRTAA 143 (160)
Q Consensus 136 ~al~~~~~ 143 (160)
.+|+.+++
T Consensus 470 ~~~~~~~~ 477 (478)
T PTZ00267 470 SKFQRACG 477 (478)
T ss_pred HHHHHHhC
Confidence 99999875
No 69
>KOG1117|consensus
Probab=98.52 E-value=9.6e-08 Score=82.05 Aligned_cols=134 Identities=21% Similarity=0.289 Sum_probs=93.4
Q ss_pred ceEEEEEEeCCeEEEeeCCCcccCCcccceeecccceeecccccc------------------c----------------
Q psy8929 8 WTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPVA------------------R---------------- 53 (160)
Q Consensus 8 Wkkrwfvl~~~~L~yy~~~~~~~~~~l~g~i~l~~~~~~~~~~~~------------------k---------------- 53 (160)
-.|+||||-|+.|.||++.+...+ .|.|+++.+.++...+.. +
T Consensus 518 ~nr~wcVlg~g~ls~fen~~S~tP---~~lI~~~Eivclav~~pd~~pn~~~~f~fE~~l~~er~~~fgle~ad~l~~wt 594 (1186)
T KOG1117|consen 518 TNRKWCVLGGGFLSYFENEKSTTP---NGLININEIVCLAVHPPDTYPNTGFIFIFEIYLPGERVFLFGLETADALRKWT 594 (1186)
T ss_pred CCCceEEcCcchhhhhhhcCCCCC---CceeeccceEEEeecCCCCCCCcCceeEEEEeecccceEEeecccHHHHHHHH
Confidence 568999999999999999988888 899999988876643320 0
Q ss_pred ----------------------------ceeeeeeeceEEEEEEeCCEEEEEeCCCCccCCccceeEEcCCceeeeecCC
Q psy8929 54 ----------------------------NFGFQITTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPV 105 (160)
Q Consensus 54 ----------------------------k~g~~~~~WkkrwfvL~~~~L~yyk~~~~~~~~~~~g~I~L~~~~~v~~~~~ 105 (160)
+-+.....|++-||.|.+..|.+.-..+..+. ...-...|...+....++.
T Consensus 595 ~aiaKhfvp~~~e~l~a~~~~llg~l~~kd~~~~~~~r~gwfsl~gssl~~~~~~~~ve~-d~~hlrrlqElsi~s~~~n 673 (1186)
T KOG1117|consen 595 EAIAKHFVPLFAENLLAADYDLLGRLFYKDCHALDQARKGWFSLDGSSLHFCLQMQPVEE-DRMHLRRLQELSISSMVQN 673 (1186)
T ss_pred HHHHHhcCchHHHHhccchhhhhhhhhhcChhhhhhccccceecCCCeeEEecCCCcCch-hHHHHHHHHHHhhhhccCC
Confidence 00112345888999999999988766443221 0011112233332233322
Q ss_pred -CCCceEEEEeCCCcEEEEEcCCHHHHHHHHHHHHHHhcccC
Q psy8929 106 -ARNFGFQITTWDSKRTILSAVTAGIRNNWMSAIKRTAAMSL 146 (160)
Q Consensus 106 -~~~~~F~i~t~~~r~~~l~a~s~~e~~~Wi~al~~~~~~~~ 146 (160)
.+.-.|.|+.. |||+|+..++.-+...|..||++++..+.
T Consensus 674 ~~K~~~l~lve~-grTLYI~g~~rldft~W~~AIekaa~~~g 714 (1186)
T KOG1117|consen 674 GEKLDVLVLVEK-GRTLYIQGETRLDFTVWHTAIEKAAGTDG 714 (1186)
T ss_pred cccccceEEEee-ccEEEEecCCcchHHHHHHHHHHHhcCCc
Confidence 35667888876 69999999999999999999999988544
No 70
>cd01250 PH_centaurin Centaurin Pleckstrin homology (PH) domain. Centaurin Pleckstrin homology (PH) domain. Centaurin beta and gamma consist of a PH domain, an ArfGAP domain and three ankyrin repeats. Centaurain gamma also has an N-terminal Ras homology domain. Centaurin alpha has a different domain architecture and its PH domain is in a different subfamily. Centaurin can bind to phosphatidlyinositol (3,4,5)P3. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.49 E-value=3.3e-07 Score=59.22 Aligned_cols=39 Identities=28% Similarity=0.530 Sum_probs=30.9
Q ss_pred CCCceEEEEEEeCCeEEEeeCCCcccCCcccceeecccce
Q psy8929 5 KHTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVT 44 (160)
Q Consensus 5 ~~~Wkkrwfvl~~~~L~yy~~~~~~~~~~l~g~i~l~~~~ 44 (160)
.+.|++|||||+++.|.||.++.+..... .+.|+|..+.
T Consensus 13 ~~~W~kr~~~L~~~~l~~y~~~~~~~~~~-~~~i~l~~~~ 51 (94)
T cd01250 13 NKEWKKRWFVLKNGQLTYHHRLKDYDNAH-VKEIDLRRCT 51 (94)
T ss_pred CCCceEEEEEEeCCeEEEEcCCccccccc-ceEEeccceE
Confidence 56899999999999999999887532222 5889998654
No 71
>cd01258 PH_syntrophin Syntrophin pleckstrin homology (PH) domain. Syntrophin pleckstrin homology (PH) domain. Syntrophins are peripheral membrane proteins, which associate with the Duchenne muscular dystrophy protein dystrophin and other proteins to form the dystrophin glycoprotein complex (DGC). There are five syntrophin isoforms, alpha1, beta1, beta2, gamma1, and gamma2. They all contain two PH domains, with the N-teminal PH domain interupted by a PDZ domain. The N-terminal PH domain of alpha1syntrophin binds phosphatidylinositol 4,5-bisphosphate. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.41 E-value=1.5e-06 Score=58.01 Aligned_cols=83 Identities=19% Similarity=0.276 Sum_probs=58.9
Q ss_pred eeeeceEEEEEEeCCEEEEEeCCCCccC--CccceeEEcC--Cceeee--ecC---CCCCceEEEEeCCC-cEEEEEcCC
Q psy8929 58 QITTWTKHWFVLRGCSLLYYRDPKAEES--GVLDGVVALN--NVTSLS--EVP---VARNFGFQITTWDS-KRTILSAVT 127 (160)
Q Consensus 58 ~~~~WkkrwfvL~~~~L~yyk~~~~~~~--~~~~g~I~L~--~~~~v~--~~~---~~~~~~F~i~t~~~-r~~~l~a~s 127 (160)
..+.|+.+|++|++..|+.|+.+--... ..+.-..+|- ....+. +.. .+++++|.|.+..+ ..++|+.++
T Consensus 15 ~~~~wrP~F~aL~~~dl~ly~s~P~s~e~w~~p~~~y~L~~~atrvv~~~~~~~~~~~~~~~F~irtg~~vesh~fsVEt 94 (108)
T cd01258 15 SSQRWRPRFLALKGSEFLFFETPPLSVEDWSRPLYVYKLYDVATRLVKNSSTRRLNDQRDNCFLIRTGTQVENHYLRVET 94 (108)
T ss_pred cccccceEEEEEcCCcEEEEeCCCCCHHHHhChhhhChhHHhhhheeccCCccCcCCCCceEEEEEcCCceeeEEEEecC
Confidence 4579999999999999999997755211 1112223332 111111 111 26789999999877 899999999
Q ss_pred HHHHHHHHHHHHH
Q psy8929 128 AGIRNNWMSAIKR 140 (160)
Q Consensus 128 ~~e~~~Wi~al~~ 140 (160)
..|+..|..||++
T Consensus 95 ~~dL~~W~raiv~ 107 (108)
T cd01258 95 HRDLASWERALVR 107 (108)
T ss_pred HHHHHHHHHHHhc
Confidence 9999999999975
No 72
>PF15409 PH_8: Pleckstrin homology domain
Probab=98.40 E-value=1.9e-06 Score=55.53 Aligned_cols=38 Identities=29% Similarity=0.586 Sum_probs=31.6
Q ss_pred CCCceEEEEEE--eCCeEEEeeCCCcccCCcccceeeccccee
Q psy8929 5 KHTWTKHWFVL--RGCSLLYYRDPKAEESGVLDGVVALNNVTS 45 (160)
Q Consensus 5 ~~~Wkkrwfvl--~~~~L~yy~~~~~~~~~~l~g~i~l~~~~~ 45 (160)
-+.|.|||||| .++.|.||+++++. .+.|.|+++.+..
T Consensus 11 lqG~~kRyFvL~~~~G~LsYy~~~~~~---~~rGsi~v~~a~i 50 (89)
T PF15409_consen 11 LQGWHKRYFVLDFEKGTLSYYRNQNSG---KLRGSIDVSLAVI 50 (89)
T ss_pred CCCceeEEEEEEcCCcEEEEEecCCCC---eeEeEEEccceEE
Confidence 57799999999 89999999988765 3379999987643
No 73
>KOG1739|consensus
Probab=98.37 E-value=9e-07 Score=72.04 Aligned_cols=82 Identities=23% Similarity=0.437 Sum_probs=66.6
Q ss_pred eeeeceEEEEEEeCCEEEEEeCCCCccCCccceeEEcCCceeeeecCCCCCceEEEEeCCCcEEEEEcCCHHHHHHHHHH
Q psy8929 58 QITTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPVARNFGFQITTWDSKRTILSAVTAGIRNNWMSA 137 (160)
Q Consensus 58 ~~~~WkkrwfvL~~~~L~yyk~~~~~~~~~~~g~I~L~~~~~v~~~~~~~~~~F~i~t~~~r~~~l~a~s~~e~~~Wi~a 137 (160)
.+..|.-|||+|+.+.|.||+++.+..-|. +|.|.|..... ..- ....+.|.|.+.. -.+++.+.+.+.++.|+++
T Consensus 36 yi~gwqdRyv~lk~g~Lsyykse~E~~hGc-Rgsi~l~ka~i-~ah-EfDe~rfdIsvn~-nv~~lra~~~~hr~~w~d~ 111 (611)
T KOG1739|consen 36 YIHGWQDRYVVLKNGALSYYKSEDETEHGC-RGSICLSKAVI-TAH-EFDECRFDISVND-NVWYLRAQDPDHRQQWIDA 111 (611)
T ss_pred ccccccceEEEEcccchhhhhhhhhhhccc-ceeeEeccCCc-ccc-cchhheeeeEecc-ceeeehhcCcHHHHHHHHH
Confidence 567899999999999999999998866543 79999988762 221 2356789999975 6999999999999999999
Q ss_pred HHHHhc
Q psy8929 138 IKRTAA 143 (160)
Q Consensus 138 l~~~~~ 143 (160)
|..-..
T Consensus 112 L~wmk~ 117 (611)
T KOG1739|consen 112 LEWMKT 117 (611)
T ss_pred HHHHhh
Confidence 987443
No 74
>cd01256 PH_dynamin Dynamin pleckstrin homology (PH) domain. Dynamin pleckstrin homology (PH) domain. Dynamin is a GTPase that regulates endocytic vesicle formation. It has an N-terminal GTPase domain, followed by a PH domain, a GTPase effector domain and a C-terminal proline arginine rich domain. Dynamin-like proteins, which are found in metazoa, plants and yeast have the same domain architecture as dynamin, but lack the PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.37 E-value=7.9e-07 Score=57.74 Aligned_cols=33 Identities=30% Similarity=0.589 Sum_probs=29.3
Q ss_pred ceEEEEEEeCCeEEEeeCCCcccCCcccceeecccc
Q psy8929 8 WTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNV 43 (160)
Q Consensus 8 Wkkrwfvl~~~~L~yy~~~~~~~~~~l~g~i~l~~~ 43 (160)
=|+|||||++.+|+||++..+.++ .+.|+|.+.
T Consensus 19 sK~~WFVLt~~~L~wykd~eeKE~---kyilpLdnL 51 (110)
T cd01256 19 SKDYWFVLTSESLSWYKDDEEKEK---KYMLPLDGL 51 (110)
T ss_pred CcceEEEEecceeeeecccccccc---cceeecccc
Confidence 489999999999999999988777 789999874
No 75
>PF00169 PH: PH domain; InterPro: IPR001849 The pleckstrin homology (PH) domain is a domain of about 100 residues that occurs in a wide range of proteins involved in intracellular signalling or as constituents of the cytoskeleton [, , , , , , ]. The pleckstrin homology domain commonly found in eukaryotic signalling proteins. The domain family possesses multiple functions including the abilities to bind inositol phosphates, and various proteins. PH domains have been found to possess inserted domains (such as in PLC gamma, syntrophins) and to be inserted within other domains. Mutations in Brutons tyrosine kinase (Btk) within its PH domain cause X-linked agammaglobulinaemia (XLA) in patients. Point mutations cluster into the positively charged end of the molecule around the predicted binding site for phosphatidylinositol lipids. The 3D structure of several PH domains has been determined []. All known cases have a common structure consisting of two perpendicular anti-parallel beta sheets, followed by a C-terminal amphipathic helix. The loops connecting the beta-strands differ greatly in length, making the PH domain relatively difficult to detect. There are no totally invariant residues within the PH domain. Proteins reported to contain one more PH domains belong to the following families: Pleckstrin, the protein where this domain was first detected, is the major substrate of protein kinase C in platelets. Pleckstrin is one of the rare proteins to contains two PH domains. Ser/Thr protein kinases such as the Akt/Rac family, the beta-adrenergic receptor kinases, the mu isoform of PKC and the trypanosomal NrkA family. Tyrosine protein kinases belonging to the Btk/Itk/Tec subfamily. Insulin Receptor Substrate 1 (IRS-1). Regulators of small G-proteins like guanine nucleotide releasing factor GNRP (Ras-GRF) (which contains 2 PH domains), guanine nucleotide exchange proteins like vav, dbl, SoS and Saccharomyces cerevisiae CDC24, GTPase activating proteins like rasGAP and BEM2/IPL2, and the human break point cluster protein bcr. Cytoskeletal proteins such as dynamin (see IPR001401 from INTERPRO), Caenorhabditis elegans kinesin-like protein unc-104 (see IPR001752 from INTERPRO), spectrin beta-chain, syntrophin (2 PH domains) and S. cerevisiae nuclear migration protein NUM1. Mammalian phosphatidylinositol-specific phospholipase C (PI-PLC) (see IPR000909 from INTERPRO) isoforms gamma and delta. Isoform gamma contains two PH domains, the second one is split into two parts separated by about 400 residues. Oxysterol binding proteins OSBP, S. cerevisiae OSH1 and YHR073w. Mouse protein citron, a putative rho/rac effector that binds to the GTP-bound forms of rho and rac. Several S. cerevisiae proteins involved in cell cycle regulation and bud formation like BEM2, BEM3, BUD4 and the BEM1-binding proteins BOI2 (BEB1) and BOI1 (BOB1). C. elegans protein MIG-10. C. elegans hypothetical proteins C04D8.1, K06H7.4 and ZK632.12. S. cerevisiae hypothetical proteins YBR129c and YHR155w. ; GO: 0005515 protein binding; PDB: 1DYN_B 2DYN_B 3SNH_A 3ZYS_C 1X05_A 2I5F_A 1ZM0_B 1XX0_A 2I5C_C 3A8P_D ....
Probab=98.37 E-value=1e-06 Score=57.07 Aligned_cols=46 Identities=30% Similarity=0.701 Sum_probs=36.3
Q ss_pred CCCCceEEEEEEeCCeEEEeeCCCcccCCcccceeecccceeecccc
Q psy8929 4 KKHTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVP 50 (160)
Q Consensus 4 ~~~~Wkkrwfvl~~~~L~yy~~~~~~~~~~l~g~i~l~~~~~~~~~~ 50 (160)
..+.|++|||||+++.|+||+++.......+.+.|+|..+ .+....
T Consensus 13 ~~~~wk~r~~vL~~~~L~~~~~~~~~~~~~~~~~i~l~~~-~v~~~~ 58 (104)
T PF00169_consen 13 SRKKWKKRYFVLRDSYLLYYKSSKDKSDSKPKGSIPLDDC-TVRPDP 58 (104)
T ss_dssp SSSSEEEEEEEEETTEEEEESSTTTTTESSESEEEEGTTE-EEEEET
T ss_pred CCCCeEEEEEEEECCEEEEEecCccccceeeeEEEEecCc-eEEEcC
Confidence 4678999999999999999999985444444799999998 444333
No 76
>KOG0690|consensus
Probab=98.35 E-value=1.4e-06 Score=68.64 Aligned_cols=90 Identities=19% Similarity=0.273 Sum_probs=60.2
Q ss_pred cceeeeeeeceEEEEEEe-CCEEEEEeCCCC-ccC-CccceeEEcCCceeeeecCCCCCceEEEEeCCC---cEEEEEcC
Q psy8929 53 RNFGFQITTWTKHWFVLR-GCSLLYYRDPKA-EES-GVLDGVVALNNVTSLSEVPVARNFGFQITTWDS---KRTILSAV 126 (160)
Q Consensus 53 kk~g~~~~~WkkrwfvL~-~~~L~yyk~~~~-~~~-~~~~g~I~L~~~~~v~~~~~~~~~~F~i~t~~~---r~~~l~a~ 126 (160)
.|+|-.+++|+.|||+|. ++.|.=|+.... ..+ ..++....+.+|.. -..+..+|+.|.|..-.= -.-.|.++
T Consensus 22 hKrGE~IknWRpRYF~l~~DG~~~Gyr~kP~~~~~~p~pLNnF~v~~cq~-m~~erPrPntFiiRcLQWTTVIERTF~ve 100 (516)
T KOG0690|consen 22 HKRGEHIKNWRPRYFLLFNDGTLLGYRSKPKEVQPTPEPLNNFMVRDCQT-MKTERPRPNTFIIRCLQWTTVIERTFYVE 100 (516)
T ss_pred hhcchhhhcccceEEEEeeCCceEeeccCCccCCCCcccccchhhhhhhh-hhccCCCCceEEEEeeeeeeeeeeeeecC
Confidence 456778999999999985 477776765433 221 12345555666552 222335889998863210 12357799
Q ss_pred CHHHHHHHHHHHHHHhc
Q psy8929 127 TAGIRNNWMSAIKRTAA 143 (160)
Q Consensus 127 s~~e~~~Wi~al~~~~~ 143 (160)
|++++++|+.||+.+.+
T Consensus 101 s~~eRq~W~~AIq~vsn 117 (516)
T KOG0690|consen 101 SAEERQEWIEAIQAVSN 117 (516)
T ss_pred CHHHHHHHHHHHHHHhh
Confidence 99999999999998765
No 77
>cd01262 PH_PDK1 3-Phosphoinositide dependent protein kinase 1 (PDK1) pleckstrin homology (PH) domain. 3-Phosphoinositide dependent protein kinase 1 (PDK1) pleckstrin homology (PH) domain. PDK1 contains an N-terminal serine/threonine kinase domain followed by a PH domain. Following binding of the PH domain to PtdIns(3,4,5)P3 and PtdIns(3,4)P2, PDK1 activates kinases such as Akt (PKB). PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.31 E-value=6.6e-06 Score=52.76 Aligned_cols=74 Identities=19% Similarity=0.233 Sum_probs=55.2
Q ss_pred eceEEEEEEeCCEEEEEeCCCCccCCccceeEEcCC-ceeeeecCCCCCceEEEEeCCCcEEEEEcCCHHHHHHHHHHHH
Q psy8929 61 TWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNN-VTSLSEVPVARNFGFQITTWDSKRTILSAVTAGIRNNWMSAIK 139 (160)
Q Consensus 61 ~WkkrwfvL~~~~L~yyk~~~~~~~~~~~g~I~L~~-~~~v~~~~~~~~~~F~i~t~~~r~~~l~a~s~~e~~~Wi~al~ 139 (160)
.+++|=++|++.--.+|-|+.... .+|.|+++. ...++.. ....|.|.||+ |+|+| .|-+..+..|+.+|.
T Consensus 14 f~kkR~LiLTd~PrL~yvdp~~~~---~KgeIp~s~~~l~v~~~---~~~~F~I~Tp~-rty~l-eD~~~~a~~W~~~I~ 85 (89)
T cd01262 14 FAKKRQLILTNGPRLIYVDPVKKV---VKGEIPWSDVELRVEVK---NSSHFFVHTPN-KVYSF-EDPKGRASQWKKAIE 85 (89)
T ss_pred ccceeeEEEecCceEEEEcCCcCe---EEeEecccccceEEEEe---cCccEEEECCC-ceEEE-ECCCCCHHHHHHHHH
Confidence 569999999985444444444333 379999999 5545544 34789999996 99999 466788999999998
Q ss_pred HHh
Q psy8929 140 RTA 142 (160)
Q Consensus 140 ~~~ 142 (160)
.+.
T Consensus 86 ~~~ 88 (89)
T cd01262 86 DLQ 88 (89)
T ss_pred HHh
Confidence 763
No 78
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=98.30 E-value=2e-06 Score=71.84 Aligned_cols=55 Identities=16% Similarity=0.318 Sum_probs=44.9
Q ss_pred EcCCceeeeecCC-----CCCceEEEEeCCCcEEEEEcCCHHHHHHHHHHHHHHhcccCC
Q psy8929 93 ALNNVTSLSEVPV-----ARNFGFQITTWDSKRTILSAVTAGIRNNWMSAIKRTAAMSLL 147 (160)
Q Consensus 93 ~L~~~~~v~~~~~-----~~~~~F~i~t~~~r~~~l~a~s~~e~~~Wi~al~~~~~~~~~ 147 (160)
+++..+.+.+++. +.+++|.+.+.+|+.+.|.|.+++|++.||.+|+++++..+.
T Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 494 (496)
T PTZ00283 435 PFSDLEDVFPVPSKYTGSNAAHVFAVAFKTGRRLLFQARSDPERDAWMQKIQSVLGIGDA 494 (496)
T ss_pred chhhhcccccccHHhhCCCCCcEEEEEecCCcEEEEecCCchhHHHHHHHHHHhcCCCCC
Confidence 4555555555544 478999999988999999999999999999999999985543
No 79
>KOG1117|consensus
Probab=98.28 E-value=1.3e-06 Score=75.28 Aligned_cols=128 Identities=18% Similarity=0.314 Sum_probs=96.9
Q ss_pred ceEEEEEEeCCeEEEeeCCCcccCCcccceeecccceeeccccccc----------------------------------
Q psy8929 8 WTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPVAR---------------------------------- 53 (160)
Q Consensus 8 Wkkrwfvl~~~~L~yy~~~~~~~~~~l~g~i~l~~~~~~~~~~~~k---------------------------------- 53 (160)
.+|||.-+.+.+|+||.++++.-. .|.|++..+..+....+.+
T Consensus 104 ~qkr~vkf~~~s~~yf~~~k~py~---k~~i~va~is~v~~~gd~kfevitn~r~fvfr~e~~~~r~~w~s~l~s~~~~Q 180 (1186)
T KOG1117|consen 104 FQKRWVKFDGSSLEYFLSPKDPYS---KGPIPVAAISAVRNFGDNKFEVITNQRTFVFRQESEGERFIWVSPLQSALKEQ 180 (1186)
T ss_pred cCccceecCCCCccccCCCCCCCC---CCceeeehhhhhhhccCceEEEEecceEEEEecCCcccceeeechhhhcchhh
Confidence 689999999999999999988777 7888887766655333210
Q ss_pred -ce------------ee-eeeece-EEEEEEeCCEEEEEeCCCCccCCccceeEEcCCceeeeecCCCCCceEEEEeCCC
Q psy8929 54 -NF------------GF-QITTWT-KHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPVARNFGFQITTWDS 118 (160)
Q Consensus 54 -k~------------g~-~~~~Wk-krwfvL~~~~L~yyk~~~~~~~~~~~g~I~L~~~~~v~~~~~~~~~~F~i~t~~~ 118 (160)
.. |. ...+.| +-|.+|.++.+..||+.++-..+..+..|++..+. |.+++ ...|.++|+-
T Consensus 181 ~l~~ap~pp~pP~raG~lelrg~kak~f~~vsp~~vqL~knlq~f~lgigit~I~m~~~n-vk~vd---r~sfdl~Tp~- 255 (1186)
T KOG1117|consen 181 RLRSAPPPPVPPPRAGWLELRGFKAKLFVAVSPERVQLYKNLQSFPLGIGITFIYMEVSN-VKEVD---RRSFDLNTPY- 255 (1186)
T ss_pred hhccCCCCCCCCCCccchhccccccceeEEecCceeeeecccccccCCceeEEEeccccc-ccccc---cceeccCCce-
Confidence 00 10 122333 45778999999999999997766555667777666 45442 3789999995
Q ss_pred cEEEEEcCCHHHHHHHHHHHHHHhc
Q psy8929 119 KRTILSAVTAGIRNNWMSAIKRTAA 143 (160)
Q Consensus 119 r~~~l~a~s~~e~~~Wi~al~~~~~ 143 (160)
|.|-|.|+++.+++.|+.|++.++.
T Consensus 256 r~fsftaese~erq~w~ea~q~siA 280 (1186)
T KOG1117|consen 256 REFSFTAESETERQIWGEAPQPSIA 280 (1186)
T ss_pred eeeeeeeccchhhhhhhhccCcccc
Confidence 9999999999999999999999876
No 80
>KOG3723|consensus
Probab=98.27 E-value=2.5e-07 Score=76.67 Aligned_cols=89 Identities=25% Similarity=0.405 Sum_probs=69.7
Q ss_pred eeeeeceEEEEEEeCCEEEEEeCCCCccCCccceeEEcCCceeeeecCC-----CCCceEEEEeCCCcEEEEEcCCHHHH
Q psy8929 57 FQITTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPV-----ARNFGFQITTWDSKRTILSAVTAGIR 131 (160)
Q Consensus 57 ~~~~~WkkrwfvL~~~~L~yyk~~~~~~~~~~~g~I~L~~~~~v~~~~~-----~~~~~F~i~t~~~r~~~l~a~s~~e~ 131 (160)
..++.|+.|||.|.+..|.|-+.....+.. ...|+|..+.+|..+.. .-+-.|+|.|.+ .+|.|.|.++.-+
T Consensus 749 Rf~kRW~TrYFTLSgA~L~~~kg~s~~dS~--~~~IDl~~IRSVk~v~~kr~~rslpKAFEIFTAD-~T~ILKaKDeKNA 825 (851)
T KOG3723|consen 749 RFIKRWKTRYFTLSGAQLLFQKGKSKDDSD--DCPIDLSKIRSVKAVAKKRRDRSLPKAFEIFTAD-KTYILKAKDEKNA 825 (851)
T ss_pred hhhhhhccceEEecchhhhcccCCCCCCCC--CCCccHHHhhhHHHHHhhhhhcccchhhheeecC-ceEEeecccccCH
Confidence 357999999999999999996644332210 36699999988775432 235689999998 6899999999999
Q ss_pred HHHHHHHHHHhcccCCC
Q psy8929 132 NNWMSAIKRTAAMSLLD 148 (160)
Q Consensus 132 ~~Wi~al~~~~~~~~~~ 148 (160)
++|++.|+=++.+...+
T Consensus 826 EEWlqCL~IavAHa~~r 842 (851)
T KOG3723|consen 826 EEWLQCLNIAVAHAKER 842 (851)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999888765533
No 81
>cd01224 PH_Collybistin Collybistin pleckstrin homology (PH) domain. Collybistin pleckstrin homology (PH) domain. Collybistin is GEF which induces submembrane clustering of the receptor-associated peripheral membrane protein gephyrin. It consists of an SH3 domain, followed by a RhoGEF(dbH) and PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.27 E-value=2.5e-05 Score=52.13 Aligned_cols=77 Identities=12% Similarity=0.183 Sum_probs=58.6
Q ss_pred eEEEEEEeCCEEEEEeCCCCccC-CccceeEEcCCceeeeecCCC--------CCceEEEEeCC-CcEEEEEcCCHHHHH
Q psy8929 63 TKHWFVLRGCSLLYYRDPKAEES-GVLDGVVALNNVTSLSEVPVA--------RNFGFQITTWD-SKRTILSAVTAGIRN 132 (160)
Q Consensus 63 kkrwfvL~~~~L~yyk~~~~~~~-~~~~g~I~L~~~~~v~~~~~~--------~~~~F~i~t~~-~r~~~l~a~s~~e~~ 132 (160)
+.|.|.|=++.|.|.|.+..... =..+|.|+|..+. |...+++ -.|+|.|+..+ +..|.|+|.|+++..
T Consensus 19 q~R~~FLFD~~LI~CKkd~~r~~~~~yKgri~l~~~~-I~d~~Dg~~~~~~~~~knafkl~~~~~~~~~~f~~Kt~e~K~ 97 (109)
T cd01224 19 SSRVLFLFDHQMVLCKKDLIRRDHLYYKGRIDLDRCE-VVNIRDGKMFSSGHTIKNSLKIYSESTDEWYLFSFKSAERKH 97 (109)
T ss_pred ccEEEEEecceEEEEecccccCCcEEEEEEEEcccEE-EEECCCCccccCCceeEEEEEEEEcCCCeEEEEEECCHHHHH
Confidence 46899999999999995432111 1236999999998 5554442 36899999654 468999999999999
Q ss_pred HHHHHHHH
Q psy8929 133 NWMSAIKR 140 (160)
Q Consensus 133 ~Wi~al~~ 140 (160)
.||+||..
T Consensus 98 ~Wm~a~~~ 105 (109)
T cd01224 98 RWLSAFAL 105 (109)
T ss_pred HHHHHHHH
Confidence 99999975
No 82
>cd01240 PH_beta-ARK Beta adrenergic receptor kinase 1(beta ARK1)(GRK2) pleckstrin homology (PH) domain. Beta adrenergic receptor kinase 1(beta ARK1)(GRK2) pleckstrin homology (PH) domain. Beta ARK1 is a G protein-coupled receptor kinase (GRK). It phosphorylates activated G-protein coupled receptors leading to the release of the previously bound heterotrimeric G protein agonist and thus signal termination. It consists of a domain found in regulators of G-protein signaling (RGS)(RH), a serine/threonine kinase domain and a C-terminal PH domain. The Beta-Ark 1 PH domain has an extended C-terminal helix, which mediates interactions with G beta gamma subunits. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or
Probab=98.24 E-value=1.5e-06 Score=57.40 Aligned_cols=87 Identities=14% Similarity=0.347 Sum_probs=68.3
Q ss_pred cce-eeeeeeceEEEEEEeCCEEEEEeCCCCccCCccceeEEcCCceeeee--cCCCCCceEEEEeCCCcEEEEEcCCHH
Q psy8929 53 RNF-GFQITTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSE--VPVARNFGFQITTWDSKRTILSAVTAG 129 (160)
Q Consensus 53 kk~-g~~~~~WkkrwfvL~~~~L~yyk~~~~~~~~~~~g~I~L~~~~~v~~--~~~~~~~~F~i~t~~~r~~~l~a~s~~ 129 (160)
+|. |.....|++|||-|-++.|.+|....++.+ ..|.+..+..|+. ......+|+.|...+++.++|.++++-
T Consensus 10 ~KLGGPFls~WQ~Ry~~LfPNRLE~~~~~~~~~~----eLi~M~~i~~V~~e~~~iK~~~CI~ik~k~~~k~vlt~~d~i 85 (116)
T cd01240 10 KKLGGPFLSQWQTRYFKLYPNRLELYGESEANKP----ELITMDQIEDVSVEFQQIKEENCILLKIRDEKKIVLTNSDEI 85 (116)
T ss_pred hhhCCHHHHHHHHHHheeCcceeeecccccccCC----cEEEeehhhhcchhheeeccCceEEEEEcCCceEEEecCCcH
Confidence 444 445688999999999999999765555444 6677777665442 222567899999988899999999999
Q ss_pred HHHHHHHHHHHHhc
Q psy8929 130 IRNNWMSAIKRTAA 143 (160)
Q Consensus 130 e~~~Wi~al~~~~~ 143 (160)
+..+|...|+.+..
T Consensus 86 ~l~qW~~elr~a~r 99 (116)
T cd01240 86 ELKQWKKELRDAHR 99 (116)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999998765
No 83
>cd01253 PH_beta_spectrin Beta-spectrin pleckstrin homology (PH) domain. Beta-spectrin pleckstrin homology (PH) domain. Beta spectrin binds actin and functions as a major component of the cytoskeleton underlying cellular membranes. Beta spectrin consists of multiple spectrin repeats followed by a PH domain, which binds to Inositol-1,4,5-Trisphosphate. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. PH domains are often involved in targeting proteins to the plasma membrane via lipid binding. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=98.24 E-value=3.1e-06 Score=56.04 Aligned_cols=38 Identities=32% Similarity=0.582 Sum_probs=27.7
Q ss_pred CCCceEEEEEEeCCeEEEeeCCCcccCCcccc--eeecccc
Q psy8929 5 KHTWTKHWFVLRGCSLLYYRDPKAEESGVLDG--VVALNNV 43 (160)
Q Consensus 5 ~~~Wkkrwfvl~~~~L~yy~~~~~~~~~~l~g--~i~l~~~ 43 (160)
.++|++|||||+++.|.||+++...... ..+ .|++..+
T Consensus 20 ~~~Wk~r~~vL~~~~L~~ykd~~~~~~~-~~~~~~i~l~~~ 59 (104)
T cd01253 20 NRSWDNVYGVLCGQSLSFYKDEKMAAEN-VHGEPPVDLTGA 59 (104)
T ss_pred CCCcceEEEEEeCCEEEEEecCcccccC-CCCCCcEeccCC
Confidence 5789999999999999999987643221 134 5666543
No 84
>cd01225 PH_Cool_Pix Cool (cloned out of library)/Pix (PAK-interactive exchange factor) pleckstrin homology (PH) domain. Cool (cloned out of library)/Pix (PAK-interactive exchange factor) pleckstrin homology (PH) domain. Cool/Pix contains an N-terminal SH3 domain followed by a RhoGEF (DH) and PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.23 E-value=1.7e-05 Score=52.77 Aligned_cols=80 Identities=14% Similarity=0.200 Sum_probs=60.4
Q ss_pred ceEEEEEEeCCEEEEEeCCCCccCCccceeEEcCCceeeeecCC--CCCceEEEEeCCCcEEEEEcCCHHHHHHHHHHHH
Q psy8929 62 WTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPV--ARNFGFQITTWDSKRTILSAVTAGIRNNWMSAIK 139 (160)
Q Consensus 62 WkkrwfvL~~~~L~yyk~~~~~~~~~~~g~I~L~~~~~v~~~~~--~~~~~F~i~t~~~r~~~l~a~s~~e~~~Wi~al~ 139 (160)
=..||++|-+..|.+.........=.-.|.++|++.. |...++ ..++.|+|.-+--.+..+.|.+.+|..+|+..|+
T Consensus 28 ~~eRyLvLFp~~LlilS~s~r~sGf~yqGkLPL~~i~-v~~lEd~e~~~~aFeI~G~li~~i~v~C~~~~e~~~Wl~hL~ 106 (111)
T cd01225 28 KRERYLVLFPNVLLMLSASPRMSGFIYQGKLPLTGII-VTRLEDTEALKNAFEISGPLIERIVVVCNNPQDAQEWVELLN 106 (111)
T ss_pred cceeEEEEcCceEEEEEcCCCccceEEeeeecccccE-EechHhccCccceEEEeccCcCcEEEEeCCHHHHHHHHHHHH
Confidence 4579999999999987764321111226999999998 443332 5679999997655688899999999999999998
Q ss_pred HHh
Q psy8929 140 RTA 142 (160)
Q Consensus 140 ~~~ 142 (160)
+-+
T Consensus 107 ~~~ 109 (111)
T cd01225 107 ANN 109 (111)
T ss_pred hhc
Confidence 854
No 85
>KOG0932|consensus
Probab=98.20 E-value=5.4e-07 Score=74.55 Aligned_cols=85 Identities=20% Similarity=0.251 Sum_probs=62.4
Q ss_pred eeeeeceEEEEEEeCCEEEEEeCCCCccCCccceeEEcCCceeee-----ecCC--CCCceEEEEeCCCcEEEEEcCCHH
Q psy8929 57 FQITTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLS-----EVPV--ARNFGFQITTWDSKRTILSAVTAG 129 (160)
Q Consensus 57 ~~~~~WkkrwfvL~~~~L~yyk~~~~~~~~~~~g~I~L~~~~~v~-----~~~~--~~~~~F~i~t~~~r~~~l~a~s~~ 129 (160)
++..+||.-|-+|+|-.||+-+|+-.... .+-.-+|.+...|. +..+ +++++|.+.|.+.|.|.|+|.+.+
T Consensus 527 rGkRgWk~fya~LkG~vLYlqkDey~p~k--alse~~lknavsvHHALAt~AtdY~KKp~Vf~lrtAdwrv~LFQaps~e 604 (774)
T KOG0932|consen 527 RGKRGWKMFYAVLKGMVLYLQKDEYKPGK--ALSESDLKNAVSVHHALATPATDYSKKPHVFKLRTADWRVFLFQAPSQE 604 (774)
T ss_pred ccchhHHHHHHHHhhheEEeeccccCccc--chhhhhhhhhhhhhhhhcCCCcccccCCceEEEEeccceeEEEeCCCHH
Confidence 45678999999999999999887654222 11112233333222 2222 689999999999999999999999
Q ss_pred HHHHHHHHHHHHhc
Q psy8929 130 IRNNWMSAIKRTAA 143 (160)
Q Consensus 130 e~~~Wi~al~~~~~ 143 (160)
||..||..|+-+..
T Consensus 605 EmqsWi~rIN~vAA 618 (774)
T KOG0932|consen 605 EMQSWIERINLVAA 618 (774)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999987654
No 86
>PF12814 Mcp5_PH: Meiotic cell cortex C-terminal pleckstrin homology; InterPro: IPR024774 This pleckstrin homology domain is found in eukaryotic proteins, including Mcp5, a fungal protein that anchors dynein at the cell cortex during the horsetail phase (prophase I) of meiosis. During prophase I of fission yeast all the telomeres become bundled at the spindle pole body and subsequently the nucleus undergoes a dynamic oscillation, resulting in elongated nuclear morphology known as "horsetail" nucleus. The pleckstrin homology domain is necessary for the cortical localisation of the Mcp5 protein during meiosis [].; GO: 0005515 protein binding, 0032065 cortical protein anchoring, 0005938 cell cortex
Probab=98.19 E-value=2.6e-05 Score=53.44 Aligned_cols=84 Identities=15% Similarity=0.185 Sum_probs=59.6
Q ss_pred eeeceEEEEEEeC--CEEEEEeCCCC-ccC-CccceeEEcCCceeeeecCC---C-----CCceEEEEeCCCcEEEEEcC
Q psy8929 59 ITTWTKHWFVLRG--CSLLYYRDPKA-EES-GVLDGVVALNNVTSLSEVPV---A-----RNFGFQITTWDSKRTILSAV 126 (160)
Q Consensus 59 ~~~WkkrwfvL~~--~~L~yyk~~~~-~~~-~~~~g~I~L~~~~~v~~~~~---~-----~~~~F~i~t~~~r~~~l~a~ 126 (160)
....++|||-|.+ .+|++...+.. ... ..-.+.|.|.++..|..... . ..++|.|.+++ |++-|.|+
T Consensus 27 ~~~~h~R~fwv~~~~~~L~Ws~~~p~~~~~~~~~~~~i~I~~v~~V~~~~~~~~~~~~~~~~~si~i~t~~-R~L~l~a~ 105 (123)
T PF12814_consen 27 SEKPHRRYFWVDPYTRTLYWSSSNPKSENPSESKAKSIRIESVTEVKDGNPSPPGLKKPDHNKSIIIVTPD-RSLDLTAP 105 (123)
T ss_pred CCCcEEEEEEEeCCCCEEEecCCCCCccccccccccceEEeeeEEecCCCCCCccccccccceEEEEEcCC-eEEEEEeC
Confidence 3578999999998 66777664321 111 01135688888887665322 2 34678888885 99999999
Q ss_pred CHHHHHHHHHHHHHHhc
Q psy8929 127 TAGIRNNWMSAIKRTAA 143 (160)
Q Consensus 127 s~~e~~~Wi~al~~~~~ 143 (160)
|.++.+-|+.+|+-.+.
T Consensus 106 s~~~~~~W~~aL~~L~~ 122 (123)
T PF12814_consen 106 SRERHEIWFNALRYLLQ 122 (123)
T ss_pred CHHHHHHHHHHHHHHhh
Confidence 99999999999987653
No 87
>PF15413 PH_11: Pleckstrin homology domain; PDB: 3MDB_D 3FEH_A 3LJU_X 3FM8_C.
Probab=98.18 E-value=1.8e-06 Score=58.23 Aligned_cols=26 Identities=46% Similarity=1.025 Sum_probs=18.8
Q ss_pred CC-CCCceEEEEEEe-CCeEEEeeCCCc
Q psy8929 3 NK-KHTWTKHWFVLR-GCSLLYYRDPKA 28 (160)
Q Consensus 3 ~~-~~~Wkkrwfvl~-~~~L~yy~~~~~ 28 (160)
++ .+.||+|||||+ |+.|.||+.+.+
T Consensus 10 ~~~~kgWk~RwFiL~k~~~L~YyK~~~~ 37 (112)
T PF15413_consen 10 NKFGKGWKKRWFILRKDGVLSYYKIPRD 37 (112)
T ss_dssp TTS-S--EEEEEEEE-TTEEEEESS---
T ss_pred CCCCcCccccEEEEEeCCEEEEeecccc
Confidence 45 789999999999 999999999543
No 88
>cd01222 PH_clg Clg (common-site lymphoma/leukemia guanine nucleotide exchange factor) pleckstrin homology (PH) domain. Clg (common-site lymphoma/leukemia guanine nucleotide exchange factor) pleckstrin homology (PH) domain. Clg contains a RhoGEF (DH) domain and a PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=98.18 E-value=3.8e-05 Score=50.42 Aligned_cols=77 Identities=16% Similarity=0.271 Sum_probs=58.0
Q ss_pred eEEEEEEeCCEEEEEeCCCCccCCccceeEEcCCceeeeecCCCCCceEEEEeCCC--cEEEEEcCCHHHHHHHHHHHHH
Q psy8929 63 TKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPVARNFGFQITTWDS--KRTILSAVTAGIRNNWMSAIKR 140 (160)
Q Consensus 63 kkrwfvL~~~~L~yyk~~~~~~~~~~~g~I~L~~~~~v~~~~~~~~~~F~i~t~~~--r~~~l~a~s~~e~~~Wi~al~~ 140 (160)
+.|++-|=+..|.|.|...+.- ..+..|.+++....+..+ +.+++|.|...+. +.|.|+|.|+++.+.||++|+.
T Consensus 17 ~eR~vFLFe~~ll~~K~~~~~y--~~K~~i~~~~l~i~e~~~-~d~~~F~v~~~~~p~~~~~l~A~s~e~K~~W~~~i~~ 93 (97)
T cd01222 17 KPRLLFLFQTMLLIAKPRGDKY--QFKAYIPCKNLMLVEHLP-GEPLCFRVIPFDDPKGALQLTARNREEKRIWTQQLKR 93 (97)
T ss_pred CceEEEEecccEEEEEecCCee--EEEEEEEecceEEecCCC-CCCcEEEEEecCCCceEEEEEecCHHHHHHHHHHHHH
Confidence 3577778888888877655432 235778888888544443 3589999976531 5999999999999999999998
Q ss_pred Hh
Q psy8929 141 TA 142 (160)
Q Consensus 141 ~~ 142 (160)
++
T Consensus 94 ~i 95 (97)
T cd01222 94 AM 95 (97)
T ss_pred Hh
Confidence 76
No 89
>KOG4807|consensus
Probab=98.03 E-value=1.4e-08 Score=80.58 Aligned_cols=85 Identities=49% Similarity=0.864 Sum_probs=75.2
Q ss_pred eeeeceEEEEEEeCCEEEEEeCCCCccCCccceeEEcCCceeeeecCCCCCceEEEEeCCCcEEEEEcCCHHHHHHHHHH
Q psy8929 58 QITTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPVARNFGFQITTWDSKRTILSAVTAGIRNNWMSA 137 (160)
Q Consensus 58 ~~~~WkkrwfvL~~~~L~yyk~~~~~~~~~~~g~I~L~~~~~v~~~~~~~~~~F~i~t~~~r~~~l~a~s~~e~~~Wi~a 137 (160)
....|++.|||+++..+.||.+....+.....|.|+|..|+.|..+...+.|.|+|.+.+ ..|.|.+.+...+..||.|
T Consensus 31 ~t~~~~k~~~~~~~~~~~~~~d~~A~~~~~L~~~~~LR~C~~v~e~a~q~nY~~~i~~~~-~~~tL~~~~s~Ir~~~~~A 109 (593)
T KOG4807|consen 31 STSQWKKHWFVLTDSSLKYYRDSTAEEADELDGEIDLRSCTDVTEYAVQRNYGFQIHTKD-AVYTLSAMTSGIRRNWIEA 109 (593)
T ss_pred chHHHHHHHHHHhHHHHHHHHHHHHHhcccCCccccHHHHHHHHHHHHHhccceeecccc-hhhhhHHHHHHHHHHHHHH
Confidence 345799999999999999999988876666689999999998887777889999999986 7999999999999999999
Q ss_pred HHHHhc
Q psy8929 138 IKRTAA 143 (160)
Q Consensus 138 l~~~~~ 143 (160)
+++...
T Consensus 110 ~~kT~~ 115 (593)
T KOG4807|consen 110 LRKTVR 115 (593)
T ss_pred HHhccC
Confidence 998654
No 90
>cd01226 PH_exo84 Exocyst complex 84-kDa subunit Pleckstrin Homology (PH) domain. Exocyst complex 84-kDa subunit Pleckstrin Homology (PH) domain. Exo84 is a subunit of the exocyt complex, which is important in intracellular trafficking. In metazoa, Exo84 has a PH domain towards its N-terminus. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=98.01 E-value=0.00011 Score=48.24 Aligned_cols=53 Identities=15% Similarity=0.339 Sum_probs=44.7
Q ss_pred ceeEEcCCceeeeecCC--CCCceEEEEeCCCcEEEEEcCCHHHHHHHHHHHHHHhc
Q psy8929 89 DGVVALNNVTSLSEVPV--ARNFGFQITTWDSKRTILSAVTAGIRNNWMSAIKRTAA 143 (160)
Q Consensus 89 ~g~I~L~~~~~v~~~~~--~~~~~F~i~t~~~r~~~l~a~s~~e~~~Wi~al~~~~~ 143 (160)
...++|.+.. |..+++ .-+++|.|.++. +.+.++|+|+++..+||++|+++..
T Consensus 45 ~~~~~L~~i~-V~ni~D~~~~kNafki~t~~-~s~i~qaes~~~K~eWl~~le~a~~ 99 (100)
T cd01226 45 ESTYSLNSVA-VVNVKDRENAKKVLKLLIFP-ESRIYQCESARIKTEWFEELEQAKR 99 (100)
T ss_pred EEEEehHHeE-EEecCCCcCcCceEEEEeCC-ccEEEEeCCHHHHHHHHHHHHHHhc
Confidence 6889999988 444443 467999999986 7999999999999999999999863
No 91
>PLN02866 phospholipase D
Probab=98.01 E-value=5.7e-05 Score=67.18 Aligned_cols=80 Identities=21% Similarity=0.441 Sum_probs=60.8
Q ss_pred eeceEEEEEEeCCEEEEEeCCCCccCCccceeEEcCCce--------eeee---cC--CCCCceEEEEeCCCcEEEEEcC
Q psy8929 60 TTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVT--------SLSE---VP--VARNFGFQITTWDSKRTILSAV 126 (160)
Q Consensus 60 ~~WkkrwfvL~~~~L~yyk~~~~~~~~~~~g~I~L~~~~--------~v~~---~~--~~~~~~F~i~t~~~r~~~l~a~ 126 (160)
..|.+|||||+++.|.|.+++.+..+ ...|.+.... .+.. .. ..-.++|.|...+ |.+.|.|.
T Consensus 216 ~~w~k~w~v~k~~~l~~~~~p~~~~~---~~v~lfD~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~i~~~~-r~l~l~~~ 291 (1068)
T PLN02866 216 DNWQKVWAVLKPGFLALLEDPFDAKP---LDIIVFDVLPASNGNGEGQISLAKEIKERNPLRFGFKVTCGN-RSIRLRTK 291 (1068)
T ss_pred CchheeEEEEeccEEEEEecCCCCce---eEEEEEecccccccCCCcceeecccccccCCCcceEEEecCc-eEEEEEEC
Confidence 56999999999999999988887665 5555444211 0111 10 1246899998875 99999999
Q ss_pred CHHHHHHHHHHHHHHhc
Q psy8929 127 TAGIRNNWMSAIKRTAA 143 (160)
Q Consensus 127 s~~e~~~Wi~al~~~~~ 143 (160)
|..++..|+.+|+.+..
T Consensus 292 s~~~~~~w~~ai~~~~~ 308 (1068)
T PLN02866 292 SSAKVKDWVAAINDAGL 308 (1068)
T ss_pred CHHHHHHHHHHHHHHHh
Confidence 99999999999999874
No 92
>KOG3531|consensus
Probab=97.99 E-value=5.8e-06 Score=71.22 Aligned_cols=84 Identities=15% Similarity=0.306 Sum_probs=70.9
Q ss_pred eeceEEEEEEeCCEEEEEeCCCCccCCccceeEEcCCceeeeecCC---CCCceEEEEeCCCcEEEEEcCCHHHHHHHHH
Q psy8929 60 TTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPV---ARNFGFQITTWDSKRTILSAVTAGIRNNWMS 136 (160)
Q Consensus 60 ~~WkkrwfvL~~~~L~yyk~~~~~~~~~~~g~I~L~~~~~v~~~~~---~~~~~F~i~t~~~r~~~l~a~s~~e~~~Wi~ 136 (160)
..|.|-|.|.+.-+|++||+-+|+.+ ..+++|-+++.-.+.+. .+.++|.+...+ ..|+|.|++.-..+.|+.
T Consensus 938 sgwqkLwvvft~fcl~fyKS~qD~~~---laslPlLgysvs~P~~~d~i~K~~vfkl~fk~-hvyffraes~yt~~rw~e 1013 (1036)
T KOG3531|consen 938 SGWQKLWVVFTNFCLFFYKSHQDSEP---LASLPLLGYSVSIPAEPDPIQKDYVFKLKFKS-HVYFFRAESYYTFERWME 1013 (1036)
T ss_pred ccceeeeeeecceeeEeecccccccc---cccccccccccCCCCCCCCcchhheeeeehhh-hHHHHhhhhhhhhhhHHH
Confidence 47999999999999999999999988 88899988874333322 678999999986 699999999999999999
Q ss_pred HHHHHhcccCC
Q psy8929 137 AIKRTAAMSLL 147 (160)
Q Consensus 137 al~~~~~~~~~ 147 (160)
.|+.+-...+.
T Consensus 1014 vi~~a~~s~d~ 1024 (1036)
T KOG3531|consen 1014 VITDAPSSADR 1024 (1036)
T ss_pred HhhcCCccCCC
Confidence 99987554433
No 93
>KOG3751|consensus
Probab=97.96 E-value=2e-05 Score=64.93 Aligned_cols=86 Identities=24% Similarity=0.409 Sum_probs=58.2
Q ss_pred eeeeeeceEEEEEEeCCEEEEEeCCCCccCCccceeEEcCCceeeeecCC-------CCCceEEEEeCC---C-c-EEEE
Q psy8929 56 GFQITTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPV-------ARNFGFQITTWD---S-K-RTIL 123 (160)
Q Consensus 56 g~~~~~WkkrwfvL~~~~L~yyk~~~~~~~~~~~g~I~L~~~~~v~~~~~-------~~~~~F~i~t~~---~-r-~~~l 123 (160)
+.+.+.|||.||||+..-|||+...+..++.-+....++.+.. |...-. ...++|.|.... . | .-+|
T Consensus 327 ~dgkKsWKk~yf~LR~SGLYys~K~tsk~~r~Lq~l~~~~~sn-VYt~i~~rKkyksPTd~~f~~K~~~~~~~~r~lk~l 405 (622)
T KOG3751|consen 327 EDGKKSWKKHYFVLRRSGLYYSTKGTSKEPRHLQCLADLHSSN-VYTGIGGRKKYKSPTDYGFCIKPNKLRNKRRFLKML 405 (622)
T ss_pred ccccccceeEEEEEecCcceEccCCCCCCchhhHHHHhcccCc-eEEeecchhccCCCCCceEEeeeccccCcccceeee
Confidence 3456899999999999999999887776652222333344433 222111 245777776321 1 2 4589
Q ss_pred EcCCHHHHHHHHHHHHHHh
Q psy8929 124 SAVTAGIRNNWMSAIKRTA 142 (160)
Q Consensus 124 ~a~s~~e~~~Wi~al~~~~ 142 (160)
||+++..+..|+.||+-+.
T Consensus 406 CAEDe~t~~~WltAiRl~K 424 (622)
T KOG3751|consen 406 CAEDEQTRTCWLTAIRLLK 424 (622)
T ss_pred ecccchhHHHHHHHHHHHH
Confidence 9999999999999998743
No 94
>PF15406 PH_6: Pleckstrin homology domain
Probab=97.95 E-value=4.2e-05 Score=50.62 Aligned_cols=67 Identities=16% Similarity=0.353 Sum_probs=46.9
Q ss_pred EEEeCCE-EEEEeCCCCccCCccceeEEcCCceeeeecCCCCCceEEEEeCCCcEEEEEcCCHHHHHHHHHHHHH
Q psy8929 67 FVLRGCS-LLYYRDPKAEESGVLDGVVALNNVTSLSEVPVARNFGFQITTWDSKRTILSAVTAGIRNNWMSAIKR 140 (160)
Q Consensus 67 fvL~~~~-L~yyk~~~~~~~~~~~g~I~L~~~~~v~~~~~~~~~~F~i~t~~~r~~~l~a~s~~e~~~Wi~al~~ 140 (160)
-.=+|.- |+|-+.++...| -|.|+|..++.+..- ..+.|.+... |....|.|.+..|++.||.+|..
T Consensus 44 AsqTGKGLLF~~K~~dka~P---~GiinLadase~~~~---g~~kF~f~~~-G~khtF~A~s~aERD~Wv~~lk~ 111 (112)
T PF15406_consen 44 ASQTGKGLLFFSKAEDKASP---SGIINLADASEPEKD---GSNKFHFKIK-GHKHTFEAASAAERDNWVAQLKA 111 (112)
T ss_pred hhccCceEEEEeccccccCC---cceEehhhccccccC---CCceEEEEeC-CceeeeecCCHHHhccHHHHhhc
Confidence 3445544 455543333444 799999998755542 3456766664 57999999999999999999863
No 95
>KOG0248|consensus
Probab=97.89 E-value=8.5e-06 Score=68.98 Aligned_cols=88 Identities=13% Similarity=0.336 Sum_probs=69.4
Q ss_pred cceeeeeeeceEEEEEEeCCEEEEEeCCCCccCCccceeEEcCCceeeeecCCCCCceEEEEeCCCcEEEEEcCCHHHHH
Q psy8929 53 RNFGFQITTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPVARNFGFQITTWDSKRTILSAVTAGIRN 132 (160)
Q Consensus 53 kk~g~~~~~WkkrwfvL~~~~L~yyk~~~~~~~~~~~g~I~L~~~~~v~~~~~~~~~~F~i~t~~~r~~~l~a~s~~e~~ 132 (160)
++-+...+.|++||||++.+.+.||+.+.+... .+.+.|++.....+... +-...|++++.. .+|+|.++++--..
T Consensus 256 ~~~~s~~k~lkrr~~v~k~gqi~~y~~~~~~~~-~p~s~~d~~s~~~~~~~--~~s~~fqli~~t-~~~~~~~~s~~lt~ 331 (936)
T KOG0248|consen 256 TQLTSRIKSLKRRYVVFKNGQISFYRKHNNRDE-EPASKIDIRSVTKLEQQ--GAAYAFQLITST-DKMNFMTESERTTH 331 (936)
T ss_pred hcchHHHHHHHhHheeeccceEEEEEcCCCccc-cccCcccccccceeecc--chhHHhhhhhhc-eeEEEeccChhhhh
Confidence 344556789999999999999999998877432 12688888877643322 345789999864 79999999999999
Q ss_pred HHHHHHHHHhcc
Q psy8929 133 NWMSAIKRTAAM 144 (160)
Q Consensus 133 ~Wi~al~~~~~~ 144 (160)
+|+..|+.+|..
T Consensus 332 dw~~iL~~~iKv 343 (936)
T KOG0248|consen 332 DWVTILSAAIKA 343 (936)
T ss_pred hhHHHHHHHHHH
Confidence 999999998883
No 96
>cd01231 PH_Lnk LNK-family Pleckstrin homology (PH) domain. LNK-family Pleckstrin homology (PH) domain. The Lnk family of proteins consists of Lnk, APS and SH2B. They are adaptor proteins consisting of a PH domain and an SH2 domain, which mediates signaling through growth factor receptors. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. The lnk family PH domain is likely involved in targeting of the adaptor proteins to the plasma membrane.
Probab=97.81 E-value=0.00015 Score=47.31 Aligned_cols=79 Identities=20% Similarity=0.389 Sum_probs=55.0
Q ss_pred eeceEEEEEEeC----CEEEEEeC--CCCccCCccceeEEcCCceeeeecCC----CCCceEEEEeCCCcEEEEEcCCHH
Q psy8929 60 TTWTKHWFVLRG----CSLLYYRD--PKAEESGVLDGVVALNNVTSLSEVPV----ARNFGFQITTWDSKRTILSAVTAG 129 (160)
Q Consensus 60 ~~WkkrwfvL~~----~~L~yyk~--~~~~~~~~~~g~I~L~~~~~v~~~~~----~~~~~F~i~t~~~r~~~l~a~s~~ 129 (160)
..|.+.=.+|.. ..|.+|.- ++...+ +-.|....+..|..... .+.|.|.|...++..|.|.|.+++
T Consensus 19 ~~WqkcRl~L~~~~gg~~le~~~~~pPKssrp---k~~v~C~~I~EvR~tt~LEmPD~~nTFvLK~~~~~eyI~Ea~d~~ 95 (107)
T cd01231 19 ARWQRGRLVLRKAVGGYMLEFYLPLPPKSSKP---KLQVACSSISEVRECTRLEMPDNLYTFVLKVDDNTDIIFEVGDEQ 95 (107)
T ss_pred cccceeeEEEEecCCCceEEEEccCCCCCCCC---ccccchhhhhhhhhcccccccCcccEEEEEecCCceEEEEcCCHH
Confidence 457776666652 45555554 555555 44455555544443322 478999999877789999999999
Q ss_pred HHHHHHHHHHHH
Q psy8929 130 IRNNWMSAIKRT 141 (160)
Q Consensus 130 e~~~Wi~al~~~ 141 (160)
+++.|+..|+.+
T Consensus 96 q~~SWla~Ir~C 107 (107)
T cd01231 96 QLNSWLAELRYC 107 (107)
T ss_pred HHHHHHHHHhcC
Confidence 999999999853
No 97
>PLN00188 enhanced disease resistance protein (EDR2); Provisional
Probab=97.78 E-value=0.0001 Score=63.21 Aligned_cols=85 Identities=13% Similarity=0.182 Sum_probs=63.0
Q ss_pred eeeceEEEEEEeCCEEEEEeCCCCccCCccceeEEcCCceeeeecCC-----CCCceEEEEeC--CCcEEEEEcCCHHHH
Q psy8929 59 ITTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPV-----ARNFGFQITTW--DSKRTILSAVTAGIR 131 (160)
Q Consensus 59 ~~~WkkrwfvL~~~~L~yyk~~~~~~~~~~~g~I~L~~~~~v~~~~~-----~~~~~F~i~t~--~~r~~~l~a~s~~e~ 131 (160)
..--++|||||.+..|.|||..-... ..++.+..|.+...|+.... .--|.|.|... ..+...|.|-+.+|+
T Consensus 20 ~~~~~~Ry~vl~~~~~~~yK~~P~~~-~~pirs~~id~~~rVed~Gr~~~~g~~~yvl~~Yn~~~~~~~~~~~a~~~eea 98 (719)
T PLN00188 20 RSYIHMRYFVLESRLLAYYKKKPQDN-QVPIKTLLIDGNCRVEDRGLKTHHGHMVYVLSVYNKKEKYHRITMAAFNIQEA 98 (719)
T ss_pred cccceeEEEEEecchhhhcccCCccc-cccceeeccCCCceEeecCceEEcCceEEEEEEecCCCccccEEEecCCHHHH
Confidence 34568999999999999999754332 33467777777776776533 12366777632 236889999999999
Q ss_pred HHHHHHHHHHhcc
Q psy8929 132 NNWMSAIKRTAAM 144 (160)
Q Consensus 132 ~~Wi~al~~~~~~ 144 (160)
..|+.||+.++..
T Consensus 99 ~~W~~a~~~a~~q 111 (719)
T PLN00188 99 LIWKEKIESVIDQ 111 (719)
T ss_pred HHHHHHHHHHHhh
Confidence 9999999999883
No 98
>KOG4807|consensus
Probab=97.73 E-value=2e-07 Score=74.12 Aligned_cols=56 Identities=54% Similarity=0.953 Sum_probs=50.9
Q ss_pred CCceEEEEEEeCCeEEEeeCCCcccCCcccceeecccceeecccccccceeeeeee
Q psy8929 6 HTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPVARNFGFQITT 61 (160)
Q Consensus 6 ~~Wkkrwfvl~~~~L~yy~~~~~~~~~~l~g~i~l~~~~~~~~~~~~kk~g~~~~~ 61 (160)
..|++.||||.+.+|.||++..++.+..|+|+|+|.+|.++.+..+.+.||+.+++
T Consensus 33 ~~~~k~~~~~~~~~~~~~~d~~A~~~~~L~~~~~LR~C~~v~e~a~q~nY~~~i~~ 88 (593)
T KOG4807|consen 33 SQWKKHWFVLTDSSLKYYRDSTAEEADELDGEIDLRSCTDVTEYAVQRNYGFQIHT 88 (593)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHhcccCCccccHHHHHHHHHHHHHhccceeecc
Confidence 35999999999999999999999999999999999999999999999999876544
No 99
>cd01232 PH_TRIO Trio pleckstrin homology (PH) domain. Trio pleckstrin homology (PH) domain. Trio is a multidomain signaling protein that contains two RhoGEF(DH)-PH domains in tandem. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=97.67 E-value=0.0011 Score=44.77 Aligned_cols=79 Identities=18% Similarity=0.338 Sum_probs=52.4
Q ss_pred EEEEEEeCCEEEEEeCCCCccC-C----ccceeEEcCCceeeeecCCCCCceEEEEeCCC----cEEEEEcCCHHHHHHH
Q psy8929 64 KHWFVLRGCSLLYYRDPKAEES-G----VLDGVVALNNVTSLSEVPVARNFGFQITTWDS----KRTILSAVTAGIRNNW 134 (160)
Q Consensus 64 krwfvL~~~~L~yyk~~~~~~~-~----~~~g~I~L~~~~~v~~~~~~~~~~F~i~t~~~----r~~~l~a~s~~e~~~W 134 (160)
.|-+-|=...|.|.+-..+... + .-+..|.++... +.+...+.+..|+|...+. .+|.++|.|.++.+.|
T Consensus 26 eR~vFLFe~~lvfsk~~~~~~~~~~~~Y~yK~~ikls~l~-l~e~v~gd~~kF~i~~~~~~~~~~~~ilqA~s~e~K~~W 104 (114)
T cd01232 26 ERRVFLFEQSIIFAKEVKKKKQFGNPKYIYKSKLQVSKMG-LTEHVEGDPCRFALWSGDPPISDNRIILKANSQETKQEW 104 (114)
T ss_pred eeEEEEeeceEEEEEEeccCCCCCceeEEEecceeeeeeE-eEEccCCCCceEEEEeCCCCCCceEEEEECCCHHHHHHH
Confidence 4555566666666664322110 0 112567777776 5554445678898875432 5999999999999999
Q ss_pred HHHHHHHhc
Q psy8929 135 MSAIKRTAA 143 (160)
Q Consensus 135 i~al~~~~~ 143 (160)
+..|++++.
T Consensus 105 ~~~I~~il~ 113 (114)
T cd01232 105 VKKIREILQ 113 (114)
T ss_pred HHHHHHHhh
Confidence 999998763
No 100
>PF15408 PH_7: Pleckstrin homology domain
Probab=97.64 E-value=2e-05 Score=49.90 Aligned_cols=76 Identities=14% Similarity=0.236 Sum_probs=55.7
Q ss_pred eceEEEEEEeCCEEEEEeCCCCccCCccceeEEcCCceeeeecCC---CC------CceEEEEeCCCcEEEEEcCCHHHH
Q psy8929 61 TWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPV---AR------NFGFQITTWDSKRTILSAVTAGIR 131 (160)
Q Consensus 61 ~WkkrwfvL~~~~L~yyk~~~~~~~~~~~g~I~L~~~~~v~~~~~---~~------~~~F~i~t~~~r~~~l~a~s~~e~ 131 (160)
.-++||.+|++..|.+|.+..... ..+..|+......+.-. .- .++|-...++++...+.|++.+.+
T Consensus 11 si~rRF~~L~~K~~~~~~~KGG~~----L~sF~L~~s~~s~Pm~~~~~A~~N~Gi~A~G~L~~~~~~~~~~~FA~S~~~~ 86 (104)
T PF15408_consen 11 SIQRRFVMLRSKQFNMYEDKGGQY----LCSFQLSSSVVSHPMVNFSQAVPNLGINAFGFLMYSPSRRHVQCFASSKKVC 86 (104)
T ss_pred hHHHHHHhhhhceeEEecccCCce----eeeeehhhhhhhcccccccccCCCCCeeEEEEEEecCCcchhhhhhhHHHHH
Confidence 346799999999999999887765 46666665543222111 11 236666778888888999999999
Q ss_pred HHHHHHHHH
Q psy8929 132 NNWMSAIKR 140 (160)
Q Consensus 132 ~~Wi~al~~ 140 (160)
+.||+++++
T Consensus 87 ~~Wi~~mN~ 95 (104)
T PF15408_consen 87 QSWIQVMNS 95 (104)
T ss_pred HHHHHHhcC
Confidence 999999976
No 101
>smart00233 PH Pleckstrin homology domain. Domain commonly found in eukaryotic signalling proteins. The domain family possesses multiple functions including the abilities to bind inositol phosphates, and various proteins. PH domains have been found to possess inserted domains (such as in PLC gamma, syntrophins) and to be inserted within other domains. Mutations in Brutons tyrosine kinase (Btk) within its PH domain cause X-linked agammaglobulinaemia (XLA) in patients. Point mutations cluster into the positively charged end of the molecule around the predicted binding site for phosphatidylinositol lipids.
Probab=97.63 E-value=0.00058 Score=43.19 Aligned_cols=45 Identities=36% Similarity=0.735 Sum_probs=35.0
Q ss_pred CCCceEEEEEEeCCeEEEeeCCCcccCCcccceeecccceeecccc
Q psy8929 5 KHTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVP 50 (160)
Q Consensus 5 ~~~Wkkrwfvl~~~~L~yy~~~~~~~~~~l~g~i~l~~~~~~~~~~ 50 (160)
...|++|||+|.++.|.||+++.......+.+.|+|..+ .+....
T Consensus 15 ~~~~~~~~~~L~~~~l~~~~~~~~~~~~~~~~~i~l~~~-~v~~~~ 59 (102)
T smart00233 15 KKSWKKRYFVLFNSTLLYYKSEKAKKDYKPKGSIDLSGI-TVREAP 59 (102)
T ss_pred cCCceEEEEEEECCEEEEEeCCCccccCCCceEEECCcC-EEEeCC
Confidence 467999999999999999998876443455789999997 444333
No 102
>cd01239 PH_PKD Protein kinase D (PKD/PKCmu) pleckstrin homology (PH) domain. Protein kinase D (PKD/PKCmu) pleckstrin homology (PH) domain. PKD consists of 2 C1 domains, followed by a PH domain and a kinase domain. While the PKD PH domain has not been shown to bind phosphorylated inositol lipids and is not required for membrane translocation, it is required for nuclear export. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=97.58 E-value=0.00021 Score=47.93 Aligned_cols=72 Identities=15% Similarity=0.287 Sum_probs=52.5
Q ss_pred CCCCCceEEEEEEeCCeEEEeeCCCcccCCcccceeecccceeecccccccceeeeeeeceEEEEEEeCCEEEEEeCCC
Q psy8929 3 NKKHTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPVARNFGFQITTWTKHWFVLRGCSLLYYRDPK 81 (160)
Q Consensus 3 ~~~~~Wkkrwfvl~~~~L~yy~~~~~~~~~~l~g~i~l~~~~~~~~~~~~kk~g~~~~~WkkrwfvL~~~~L~yyk~~~ 81 (160)
++.+.|||++++|....|.+|.++...+. ...|+|+++..+....... ....-....|.+.-..+.||-.+.
T Consensus 11 ~~d~~rKRhYWrLDsK~Itlf~~e~~sky---yKeIPLsEIl~V~~~~~~~----~~~~~~~hcFEi~T~~~vY~VG~~ 82 (117)
T cd01239 11 SSDNRRKKHYWRLDSKAITLYQEESGSRY---YKEIPLAEILSVSSNNGDS----VLAKHPPHCFEIRTTTNVYFVGGE 82 (117)
T ss_pred cCccceeeeEEEecCCeEEEEEcCCCCee---eEEeehHHheEEeccCCCc----CCCCCCCcEEEEEecCEEEEeccc
Confidence 56789999999999999999999987777 7899999998877542221 111222345666667777777554
No 103
>cd01230 PH_EFA6 EFA6 Pleckstrin Homology (PH) domain. EFA6 Pleckstrin Homology (PH) domain. EFA6 is an guanine nucleotide exchange factor for ARF6, which is involved in membrane recycling. It consists of a SEC7 domain followed by a PH domain. The EFA6 PH domain regulates its association with the plasma membrane. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=97.54 E-value=0.00034 Score=47.51 Aligned_cols=40 Identities=20% Similarity=0.441 Sum_probs=30.6
Q ss_pred CCCceEEEEEEeCCeEEEeeCCCcccCC----cccceeecccce
Q psy8929 5 KHTWTKHWFVLRGCSLLYYRDPKAEESG----VLDGVVALNNVT 44 (160)
Q Consensus 5 ~~~Wkkrwfvl~~~~L~yy~~~~~~~~~----~l~g~i~l~~~~ 44 (160)
.+.|+++|+||++..|+.|++......+ .++..|.|..+.
T Consensus 23 ~R~Wk~~y~vL~g~~L~~yKDe~~~~~~~~~~~~~~~Isi~~a~ 66 (117)
T cd01230 23 KRSWKMFYGILRGLVLYLQKDEHKPGKSLSETELKNAISIHHAL 66 (117)
T ss_pred CCcceEEEEEEECCEEEEEccCcccccccccccccceEEeccce
Confidence 3689999999999999999998642222 234677888766
No 104
>cd01223 PH_Vav Vav pleckstrin homology (PH) domain. Vav pleckstrin homology (PH) domain. Vav acts as a guanosine nucleotide exchange factor(GEF) for Rho/Rac proteins. Mammalian Vav proteins consist of a calponin homology (CH) domain, an acidic region, a rho-GEF (DH)domain, a PH domain, a Zinc finger region and an SH2 domain, flanked by two SH3 domains. In invertebrates such as Drosophila and C.elegans, Vav is missing the N-terminal SH3 domain . PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=97.50 E-value=0.0013 Score=44.43 Aligned_cols=80 Identities=11% Similarity=0.230 Sum_probs=56.0
Q ss_pred eEEEEEEeCCEEEEEeCCCCcc--C-CccceeEEcCCceeeeecC--C------CCCceEEEEeCCC-cEEEEEcCCHHH
Q psy8929 63 TKHWFVLRGCSLLYYRDPKAEE--S-GVLDGVVALNNVTSLSEVP--V------ARNFGFQITTWDS-KRTILSAVTAGI 130 (160)
Q Consensus 63 kkrwfvL~~~~L~yyk~~~~~~--~-~~~~g~I~L~~~~~v~~~~--~------~~~~~F~i~t~~~-r~~~l~a~s~~e 130 (160)
+.|+.-|=+..|...|...+.. + =.....+.|..+. |...+ + ...++|.|...++ ..|.|+|.|+++
T Consensus 21 k~RyiFLFDk~lI~CK~~~~~~~~~~Y~~Ke~~~l~~~~-I~~~~~~d~~~~~~~~~~~f~L~~~~~~~~~~f~~Ktee~ 99 (116)
T cd01223 21 KLRYIFLFDKAVIVCKALGDNTGDMQYTYKDIHDLADYK-IENNPSRDTEGRDTRWKYGFYLAHKQGKTGFTFYFKTEHL 99 (116)
T ss_pred ceeEEEEecceEEEEEecCCCCCCccEEhHHhhhhheee-eEecCccCcccCCcceEEEEEEEecCCCccEEEEeCCHHH
Confidence 4688888888888888554421 0 0113456666655 33221 1 2457899998764 689999999999
Q ss_pred HHHHHHHHHHHhc
Q psy8929 131 RNNWMSAIKRTAA 143 (160)
Q Consensus 131 ~~~Wi~al~~~~~ 143 (160)
...||.+|..|+.
T Consensus 100 K~kWm~al~~a~s 112 (116)
T cd01223 100 RKKWLKALEMAMS 112 (116)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999999876
No 105
>cd01248 PH_PLC Phospholipase C (PLC) pleckstrin homology (PH) domain. Phospholipase C (PLC) pleckstrin homology (PH) domain. There are several isozymes of PLC (beta, gamma, delta, epsilon. zeta). While, PLC beta, gamma and delta all have N-terminal PH domains, lipid binding specificity is not conserved between them. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=97.35 E-value=0.0028 Score=42.71 Aligned_cols=73 Identities=19% Similarity=0.324 Sum_probs=50.4
Q ss_pred EEEEEEeC-CEEEEEeCCCCccCCccceeEEcCCceeeeecCC---------------CCCceEEEEeCCC---cEEEEE
Q psy8929 64 KHWFVLRG-CSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPV---------------ARNFGFQITTWDS---KRTILS 124 (160)
Q Consensus 64 krwfvL~~-~~L~yyk~~~~~~~~~~~g~I~L~~~~~v~~~~~---------------~~~~~F~i~t~~~---r~~~l~ 124 (160)
++.|.|.. +...|+.+..... .+.|+|..+..|..... ....+|.|+.... +++.|.
T Consensus 23 ~~~f~ld~~~~~l~W~~~~~~~----~~~l~i~~IkeIR~G~~~k~~~~~~~~~~~~~~e~~~fTIiy~~~~~~k~L~lV 98 (115)
T cd01248 23 RRLFRLDEKGFFLYWKDEGKKE----KKVLDISSIKEIRTGKQPKDLKLRAELNQGNSLEERCFTIVYGTDLNLKSLDLV 98 (115)
T ss_pred eEEEEEcCCCcEEEEeCCCCcc----ccEEEehhhhhhhCCCCCcchHHhhhhhcCCCccccEEEEEECCCCCeeEEEEE
Confidence 56688864 4444445443322 47788888877654321 1237899987543 589999
Q ss_pred cCCHHHHHHHHHHHHH
Q psy8929 125 AVTAGIRNNWMSAIKR 140 (160)
Q Consensus 125 a~s~~e~~~Wi~al~~ 140 (160)
|+|+++++.|+..|+.
T Consensus 99 A~s~~~a~~W~~gL~~ 114 (115)
T cd01248 99 APSEEEAKTWVSGLRK 114 (115)
T ss_pred ECCHHHHHHHHHHHhh
Confidence 9999999999999974
No 106
>KOG3640|consensus
Probab=97.30 E-value=0.0001 Score=64.48 Aligned_cols=59 Identities=27% Similarity=0.526 Sum_probs=46.5
Q ss_pred CCceEEEEEEeCCeEEEeeCCCcccCCcccceeecccceeecccccc-----cceeeeeeeceE
Q psy8929 6 HTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPVA-----RNFGFQITTWTK 64 (160)
Q Consensus 6 ~~Wkkrwfvl~~~~L~yy~~~~~~~~~~l~g~i~l~~~~~~~~~~~~-----kk~g~~~~~Wkk 64 (160)
..|-||||+|.++.+.|++.|.+|+.....|.|||+.|..-...+.. +...|.+..|+.
T Consensus 1006 GaWhRyWc~L~gg~I~fWk~PdDEkrK~Pig~IDLt~CTsq~ie~a~rdicar~ntFhie~~rP 1069 (1116)
T KOG3640|consen 1006 GAWHRYWCALHGGEIKFWKYPDDEKRKVPIGQIDLTKCTSQSIEEARRDICARPNTFHIEVWRP 1069 (1116)
T ss_pred chhhhhhHHhcCCeeeeecCcchhcccCcceeeehhhhhccccccchhhhccCCceeEEEeecc
Confidence 46999999999999999999999998888899999999874433322 334566666654
No 107
>cd00900 PH-like Pleckstrin homology-like domain. Pleckstrin homology-like domain. This family includes the PH domain, both the Shc-like and IRS-like PTB domains, the ran-binding domain, the EVH1 domain, a domain in neurobeachin and the third domain of FERM. All of these domains have a PH fold, but lack significant sequence similarity. They are generally involved in targeting to protein to the appropriate cellular location or interacting with a binding partner. The PH domain is commonly found in eukaryotic signaling proteins. This domain family possesses multiple functions including the ability to bind inositol phosphates and to other proteins.
Probab=97.24 E-value=0.0029 Score=39.78 Aligned_cols=37 Identities=27% Similarity=0.679 Sum_probs=30.0
Q ss_pred CCceEEEEEEeCCeEEEeeCCCcccCCcccceeecccce
Q psy8929 6 HTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVT 44 (160)
Q Consensus 6 ~~Wkkrwfvl~~~~L~yy~~~~~~~~~~l~g~i~l~~~~ 44 (160)
..|++|||+|.+..|.||.++....... +.+++..+.
T Consensus 17 ~~w~~~~~~l~~~~l~~~~~~~~~~~~~--~~~~l~~~~ 53 (99)
T cd00900 17 KRWKRRWFFLFDDGLLLYKSDDKKEIKP--GSIPLSEIS 53 (99)
T ss_pred cCceeeEEEEECCEEEEEEcCCCCcCCC--CEEEccceE
Confidence 6899999999999999999987655521 678887765
No 108
>cd01259 PH_Apbb1ip Apbb1ip (Amyloid beta (A4) Precursor protein-Binding, family B, member 1 Interacting Protein) pleckstrin homology (PH) domain. Apbb1ip (Amyloid beta (A4) Precursor protein-Binding, family B, member 1 Interacting Protein) pleckstrin homology (PH) domain. Apbb1ip consists of a Ras-associated domain and a PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=97.24 E-value=0.00021 Score=47.64 Aligned_cols=39 Identities=31% Similarity=0.589 Sum_probs=28.1
Q ss_pred CCCCceEEEEEEeCCeEEEeeCCCcccCCcccceeeccc
Q psy8929 4 KKHTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNN 42 (160)
Q Consensus 4 ~~~~Wkkrwfvl~~~~L~yy~~~~~~~~~~l~g~i~l~~ 42 (160)
-.+.|||+|||||...|+|+...+...+..|.-..++..
T Consensus 12 gkKsWKk~~f~LR~SGLYy~~Kgksk~srdL~cl~~f~~ 50 (114)
T cd01259 12 GKKSWKKYYFVLRSSGLYYFPKEKTKNTRDLACLNLLHG 50 (114)
T ss_pred CCccceEEEEEEeCCeeEEccCCCcCCHHHHHHHHhccc
Confidence 368899999999999999997776655544433334433
No 109
>cd01221 PH_ephexin Ephexin Pleckstrin homology (PH) domain. Ephexin Pleckstrin homology (PH) domain. Ephexin contains a RhoGEF (DH) followed by a PH domain and an SH3 domain. The ephexin PH domain is believed to act with the DH domain in mediating protein-protein interactions with the Eph receptor. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=97.17 E-value=0.0036 Score=42.88 Aligned_cols=78 Identities=21% Similarity=0.214 Sum_probs=46.1
Q ss_pred ceEEEEEEeCCEEEEEeCCCCccCCc----cceeEEcCCceeeeec------CCCCCceEEEEeC---CC--cEEEEEcC
Q psy8929 62 WTKHWFVLRGCSLLYYRDPKAEESGV----LDGVVALNNVTSLSEV------PVARNFGFQITTW---DS--KRTILSAV 126 (160)
Q Consensus 62 WkkrwfvL~~~~L~yyk~~~~~~~~~----~~g~I~L~~~~~v~~~------~~~~~~~F~i~t~---~~--r~~~l~a~ 126 (160)
-+.+|+.|=.+.|.|.+...+..-.. +...+.+..+...... ....++.|.|+.- +| +.+.|+|+
T Consensus 27 ~~~vylfLFnDlLl~tkkK~~~~f~V~dy~~r~~l~V~~~e~~~~~~~~~~~~~~~~~~F~ltLl~N~~gk~~el~L~a~ 106 (125)
T cd01221 27 ARTIYLFLFNDLLLITKKKLGSTFVVFDYAPRSFLRVEKIEPDNQKIPLGSNLVGRPNLFLLTLLRNADDKQAELLLSAD 106 (125)
T ss_pred CCcEEEEEecceEEEEEecCCCeEEEEeeccccceEEeecccccccccccccccCCCceEEEEeeccCCCCEEEEEEECC
Confidence 34578888888888877554321100 0223333332211100 0035789999721 12 57999999
Q ss_pred CHHHHHHHHHHHH
Q psy8929 127 TAGIRNNWMSAIK 139 (160)
Q Consensus 127 s~~e~~~Wi~al~ 139 (160)
|+.|+.+||.||.
T Consensus 107 S~sdr~rWi~Al~ 119 (125)
T cd01221 107 SQSDRERWLSALA 119 (125)
T ss_pred CHHHHHHHHHhcC
Confidence 9999999999984
No 110
>cd00821 PH Pleckstrin homology (PH) domain. Pleckstrin homology (PH) domain. PH domains are only found in eukaryotes. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=97.08 E-value=0.0045 Score=38.55 Aligned_cols=38 Identities=32% Similarity=0.671 Sum_probs=30.6
Q ss_pred CCceEEEEEEeCCeEEEeeCCCcccCCcccceeecccc
Q psy8929 6 HTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNV 43 (160)
Q Consensus 6 ~~Wkkrwfvl~~~~L~yy~~~~~~~~~~l~g~i~l~~~ 43 (160)
..|++|||+|.++.|.+|.++.......+.+.|+|..+
T Consensus 14 ~~w~~~~~~L~~~~l~~~~~~~~~~~~~~~~~i~l~~~ 51 (96)
T cd00821 14 KGWKRRWFVLFNDLLLYYKKKSSKKSYKPKGSIPLSGA 51 (96)
T ss_pred CCccEEEEEEECCEEEEEECCCCCcCCCCcceEEcCCC
Confidence 67999999999999999998865323344789999983
No 111
>PF14593 PH_3: PH domain; PDB: 1W1H_D 1W1D_A 1W1G_A 2VKI_A.
Probab=97.07 E-value=0.0051 Score=40.84 Aligned_cols=59 Identities=22% Similarity=0.367 Sum_probs=38.3
Q ss_pred ceEEEEEEeCC-eEEEeeCCCcccCCcccceeecccceeecccccccceeeeeeeceEEEEEEeCCEEEEEeCCCC
Q psy8929 8 WTKHWFVLRGC-SLLYYRDPKAEESGVLDGVVALNNVTSLSEVPVARNFGFQITTWTKHWFVLRGCSLLYYRDPKA 82 (160)
Q Consensus 8 Wkkrwfvl~~~-~L~yy~~~~~~~~~~l~g~i~l~~~~~~~~~~~~kk~g~~~~~WkkrwfvL~~~~L~yyk~~~~ 82 (160)
.|+|||+|+++ .|+|+...... +.|.|+++....+.. ++- +.|++-+++.-|++.|...
T Consensus 27 ~kkR~liLTd~PrL~Yvdp~~~~----~KGeI~~~~~l~v~~-----------k~~-~~F~I~tp~RtY~l~d~~~ 86 (104)
T PF14593_consen 27 AKKRQLILTDGPRLFYVDPKKMV----LKGEIPWSKELSVEV-----------KSF-KTFFIHTPKRTYYLEDPEG 86 (104)
T ss_dssp EEEEEEEEETTTEEEEEETTTTE----EEEEE--STT-EEEE-----------CSS-SEEEEEETTEEEEEE-TTS
T ss_pred EEEEEEEEccCCEEEEEECCCCe----ECcEEecCCceEEEE-----------ccC-CEEEEECCCcEEEEECCCC
Confidence 79999999988 77776655443 359999996543221 111 2678888888888888654
No 112
>cd01228 PH_BCR-related BCR (breakpoint cluster region)-related pleckstrin homology (PH) domain. BCR (breakpoint cluster region)-related pleckstrin homology (PH) domain. The BCR-related protein has a RhoGEF(DH) domain followed by a PH domain, a C2 domain and a RhoGAP domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinases, tyrosine kinases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=96.93 E-value=0.0046 Score=40.08 Aligned_cols=72 Identities=14% Similarity=0.166 Sum_probs=44.8
Q ss_pred eEEEEEEeCCEEEEEeCC---CCc-cCCccceeEEcCCceeeeecCCCCCceEEEEeCCCcEEEEEcCCHHHHHHHHHHH
Q psy8929 63 TKHWFVLRGCSLLYYRDP---KAE-ESGVLDGVVALNNVTSLSEVPVARNFGFQITTWDSKRTILSAVTAGIRNNWMSAI 138 (160)
Q Consensus 63 kkrwfvL~~~~L~yyk~~---~~~-~~~~~~g~I~L~~~~~v~~~~~~~~~~F~i~t~~~r~~~l~a~s~~e~~~Wi~al 138 (160)
|.|-|-|=++-|.|-+-. ... ..=.-.-.|+|.+.. +... .|.+....+++|.|.|.|..|+.+|+.+|
T Consensus 18 K~R~~FLFnDlLvc~~ik~~~~~k~~kY~~~w~IPL~dl~-~~~~------~~~~~~~~~KSf~~~asS~~Er~eW~~hI 90 (96)
T cd01228 18 KLRHLFLFTDVLLCAKLKKTSRGKHQQYDCKWYIPLADLS-FPSE------PFRIHNKNGKSYTFLLSSDYERSEWRESI 90 (96)
T ss_pred cceEEEeeccEEEEEEeeeccCccccccceeEEEEhHHhe-ecch------hhhccccCCceEEEEecCHHHHHHHHHHH
Confidence 445555656656554321 111 000113578888876 3333 25554434689999999999999999999
Q ss_pred HHH
Q psy8929 139 KRT 141 (160)
Q Consensus 139 ~~~ 141 (160)
++.
T Consensus 91 ~~~ 93 (96)
T cd01228 91 QKL 93 (96)
T ss_pred HHH
Confidence 874
No 113
>cd01227 PH_Dbs Dbs (DBL's big sister) pleckstrin homology (PH) domain. Dbs (DBL's big sister) pleckstrin homology (PH) domain. Dbs is a guanine nucleotide exchange factor (GEF), which contains spectrin repeats, a rhoGEF (DH) domain and a PH domain. The Dbs PH domain participates in binding to both the Cdc42 and RhoA GTPases. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=96.74 E-value=0.036 Score=38.41 Aligned_cols=80 Identities=16% Similarity=0.259 Sum_probs=52.9
Q ss_pred eEEEEEEeCCEEEEEeCCCCccC------CccceeEEcCCceeeeecCCCCCceEEEEeCCC-cEEEEEcCCHHHHHHHH
Q psy8929 63 TKHWFVLRGCSLLYYRDPKAEES------GVLDGVVALNNVTSLSEVPVARNFGFQITTWDS-KRTILSAVTAGIRNNWM 135 (160)
Q Consensus 63 kkrwfvL~~~~L~yyk~~~~~~~------~~~~g~I~L~~~~~v~~~~~~~~~~F~i~t~~~-r~~~l~a~s~~e~~~Wi 135 (160)
+.|.+-|=+..+.+.+-..+... =.-+..|.++... +.+...+.+..|+|-+.+. .+|.|+|.|++..+.|+
T Consensus 30 ~eRhVFLFE~~viF~K~~~~~~~~~~~p~Y~yK~~ikls~lg-lte~v~gd~~kFeiw~~~~~~~yilqA~t~e~K~~Wv 108 (133)
T cd01227 30 MQRHIFLHEKAVLFCKKREENGEGEKAPSYSFKQSLKMTAVG-ITENVKGDTKKFEIWYNAREEVYILQAPTPEIKAAWV 108 (133)
T ss_pred ceeEEEEecceEEEEEEeccCCCCCcceeEEEeeeEEeeccc-ccccCCCCccEEEEEeCCCCcEEEEEcCCHHHHHHHH
Confidence 35666777777777764422110 0113556666655 3333334578899986432 59999999999999999
Q ss_pred HHHHHHhc
Q psy8929 136 SAIKRTAA 143 (160)
Q Consensus 136 ~al~~~~~ 143 (160)
..|++.+.
T Consensus 109 ~~I~~iL~ 116 (133)
T cd01227 109 NEIRKVLT 116 (133)
T ss_pred HHHHHHHH
Confidence 99999765
No 114
>cd01219 PH_FGD FGD (faciogenital dysplasia protein) pleckstrin homology (PH) domain. FGD (faciogenital dysplasia protein) pleckstrin homology (PH) domain. FGD has a RhoGEF (DH) domain, followed by a PH domain, a FYVE domain and a C-terminal PH domain. FGD is a guanine nucleotide exchange factor that activates the Rho GTPase Cdc42. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=96.57 E-value=0.014 Score=38.47 Aligned_cols=41 Identities=12% Similarity=0.127 Sum_probs=28.4
Q ss_pred CCCCceEEEEEEeCCeEEEeeCCCc--ccCCcccceeecccce
Q psy8929 4 KKHTWTKHWFVLRGCSLLYYRDPKA--EESGVLDGVVALNNVT 44 (160)
Q Consensus 4 ~~~~Wkkrwfvl~~~~L~yy~~~~~--~~~~~l~g~i~l~~~~ 44 (160)
+.++||.|||+|-++.|.|++.... ...-.+.+.|+|+.+.
T Consensus 14 ~~~~~k~RyffLFnd~Ll~~~~~~~~~~~~y~~~~~i~l~~~~ 56 (101)
T cd01219 14 TTEKTEERYLFLFNDLLLYCVPRKMIGGSKFKVRARIDVSGMQ 56 (101)
T ss_pred CCCCceeEEEEEeCCEEEEEEcccccCCCcEEEEEEEecccEE
Confidence 3578999999999999999985321 1111234778888754
No 115
>KOG1090|consensus
Probab=96.47 E-value=0.0013 Score=58.37 Aligned_cols=42 Identities=33% Similarity=0.646 Sum_probs=35.7
Q ss_pred CCCCceEEEEEEe--CCeEEEeeCCCcccCCcccceeecccceeecc
Q psy8929 4 KKHTWTKHWFVLR--GCSLLYYRDPKAEESGVLDGVVALNNVTSLSE 48 (160)
Q Consensus 4 ~~~~Wkkrwfvl~--~~~L~yy~~~~~~~~~~l~g~i~l~~~~~~~~ 48 (160)
+-|-||-|||||. .+.|+||.+..++++ .|.|||..+..+..
T Consensus 1646 ~lK~Wk~RwFVLd~~khqlrYYd~~edt~p---kG~IdLaevesv~~ 1689 (1732)
T KOG1090|consen 1646 KLKLWKPRWFVLDPDKHQLRYYDDFEDTKP---KGCIDLAEVESVAL 1689 (1732)
T ss_pred hhcccccceeEecCCccceeeecccccccc---cchhhhhhhhhhcc
Confidence 3477999999997 699999999988887 89999998776554
No 116
>cd01234 PH_CADPS CADPS (Ca2+-dependent activator protein) Pleckstrin homology (PH) domain. CADPS (Ca2+-dependent activator protein) Pleckstrin homology (PH) domain. CADPS is a calcium-dependent activator involved in secretion. It contains a central PH domain that binds to phosphoinositide 4,5 bisphosphate containing liposomes. However, membrane association may also be mediated by binding to phosphatidlyserine via general electrostatic interactions. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=96.38 E-value=0.0016 Score=42.88 Aligned_cols=16 Identities=38% Similarity=0.642 Sum_probs=13.1
Q ss_pred CCCCceEEEEEEeCCe
Q psy8929 4 KKHTWTKHWFVLRGCS 19 (160)
Q Consensus 4 ~~~~Wkkrwfvl~~~~ 19 (160)
..|+||||||||++=+
T Consensus 15 ~~KkWKKRwFvL~qvs 30 (117)
T cd01234 15 VWKKWKKRFFVLVQVS 30 (117)
T ss_pred hhhhhheeEEEEEchh
Confidence 3578999999999744
No 117
>cd01242 PH_ROK Rok (Rho- associated kinase) pleckstrin homology (PH) domain. Rok (Rho- associated kinase) pleckstrin homology (PH) domain. Rok is a serine/threonine kinase that binds GTP-rho. It consists of a kinase domain, a coiled coil region and a PH domain. The Rok PH domain is interrupted by a C1 domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=96.20 E-value=0.016 Score=38.65 Aligned_cols=38 Identities=21% Similarity=0.560 Sum_probs=30.5
Q ss_pred CCCceEEEEEEeCCeEEEeeCCCcccCCcccceeeccc
Q psy8929 5 KHTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNN 42 (160)
Q Consensus 5 ~~~Wkkrwfvl~~~~L~yy~~~~~~~~~~l~g~i~l~~ 42 (160)
++.|+|+|.||.+..|+.|..+.+.....+..++|+..
T Consensus 17 k~gW~r~yvVv~~~Kl~lYd~e~~~~~~~p~~vldl~~ 54 (112)
T cd01242 17 KPGWKKQYVVVSSRKILFYNDEQDKENSTPSMILDIDK 54 (112)
T ss_pred cCCceEEEEEEeCCEEEEEecCccccCCCcEEEEEccc
Confidence 56899999999999999999887655444456778765
No 118
>KOG4424|consensus
Probab=96.09 E-value=0.012 Score=49.62 Aligned_cols=85 Identities=18% Similarity=0.213 Sum_probs=60.2
Q ss_pred eeeeeceEEEEEEeCCEEEEEeCCCCccCC---ccceeEEcCCceeeeecCCCCCceEEEEeCCCcEEEEEcCCHHHHHH
Q psy8929 57 FQITTWTKHWFVLRGCSLLYYRDPKAEESG---VLDGVVALNNVTSLSEVPVARNFGFQITTWDSKRTILSAVTAGIRNN 133 (160)
Q Consensus 57 ~~~~~WkkrwfvL~~~~L~yyk~~~~~~~~---~~~g~I~L~~~~~v~~~~~~~~~~F~i~t~~~r~~~l~a~s~~e~~~ 133 (160)
....+-..||++|=...|.|.+-..- .++ .....+++.++...+......++.|.+..++ |...|.|.|++|..+
T Consensus 283 ~k~~~~qeRylfLFNd~~lyc~~r~~-~~~~k~~~r~~~s~~~~~v~~~~~~~~~~tF~~~G~~-r~vel~a~t~~ek~e 360 (623)
T KOG4424|consen 283 AKNGTTQERYLFLFNDILLYCKPRKR-LPGSKYEVRARCSISHMQVQEDDNEELPHTFILTGKK-RGVELQARTEQEKKE 360 (623)
T ss_pred ccCCCcceeEEEEehhHHHhhhhhhh-cccceeccceeeccCcchhcccccccCCceEEEeccc-ceEEeecCchhhHHH
Confidence 34466788999998887777664331 110 0134455555553333333568999999875 899999999999999
Q ss_pred HHHHHHHHhc
Q psy8929 134 WMSAIKRTAA 143 (160)
Q Consensus 134 Wi~al~~~~~ 143 (160)
||++|+.+|.
T Consensus 361 Wv~~I~~~Id 370 (623)
T KOG4424|consen 361 WVQAIQDAID 370 (623)
T ss_pred HHHHHHHHHH
Confidence 9999999987
No 119
>KOG3549|consensus
Probab=96.06 E-value=0.012 Score=46.90 Aligned_cols=79 Identities=9% Similarity=0.247 Sum_probs=59.6
Q ss_pred eeeceEEEEEEeCCEEEEEeCCCCccCCccceeEEcCCcee-----------eee--cCCCCCceEEEEeCCCcEEEEEc
Q psy8929 59 ITTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTS-----------LSE--VPVARNFGFQITTWDSKRTILSA 125 (160)
Q Consensus 59 ~~~WkkrwfvL~~~~L~yyk~~~~~~~~~~~g~I~L~~~~~-----------v~~--~~~~~~~~F~i~t~~~r~~~l~a 125 (160)
...++.||..|+|.++|.|..+.-+. .+...+.. +.. ..+.|++||.|....+...||+.
T Consensus 297 ~q~y~P~FLaLkG~~~y~F~tPPv~t-------~dw~rAe~ty~vye~mfki~Kdsd~~D~R~~CF~~qs~~ge~~yfsV 369 (505)
T KOG3549|consen 297 WQSYKPRFLALKGTEVYLFETPPVNT-------ADWSRAEVTYKVYETMFKIVKDSDTVDSRQHCFLLQSSGGEPRYFSV 369 (505)
T ss_pred ccccCceeEEecCcEEEEEcCCCcch-------hhhhhhhhhHHHHHHHHHHhccccccccccceEEEEcCCCCceEEEE
Confidence 45678999999999999999775432 22222211 111 12268999999998889999999
Q ss_pred CCHHHHHHHHHHHHHHhcc
Q psy8929 126 VTAGIRNNWMSAIKRTAAM 144 (160)
Q Consensus 126 ~s~~e~~~Wi~al~~~~~~ 144 (160)
+...|...|-++.+.|+-.
T Consensus 370 El~seLa~wE~sfq~Atf~ 388 (505)
T KOG3549|consen 370 ELRSELARWENSFQAATFT 388 (505)
T ss_pred ehhhHHHHHHHHHhhHHhH
Confidence 9999999999999987753
No 120
>PF15411 PH_10: Pleckstrin homology domain
Probab=96.04 E-value=0.099 Score=35.41 Aligned_cols=79 Identities=19% Similarity=0.188 Sum_probs=55.9
Q ss_pred eeceEEEEEEeCCEEEEEeCCCCc----------------cCCccceeEEcCCceeeeecCCCCCceEEEEe---CCCcE
Q psy8929 60 TTWTKHWFVLRGCSLLYYRDPKAE----------------ESGVLDGVVALNNVTSLSEVPVARNFGFQITT---WDSKR 120 (160)
Q Consensus 60 ~~WkkrwfvL~~~~L~yyk~~~~~----------------~~~~~~g~I~L~~~~~v~~~~~~~~~~F~i~t---~~~r~ 120 (160)
..|+...+-|=...|..++..... .+-.+.|.|.+..++.|........+.++|.- ++-..
T Consensus 19 ~~erE~~vYLFe~illc~kE~~~~~~~~~~~~~~~~~~~~~~L~LKGrI~i~~i~~v~~~s~~g~~~L~i~w~~d~e~~~ 98 (116)
T PF15411_consen 19 DSEREYEVYLFEKILLCCKEVKPKKKKSKQISSKKKKKKKTKLQLKGRIYISNITEVSSSSKPGSYSLQISWKGDPELEN 98 (116)
T ss_pred CcceeeeeeeeeeeEEEEecCccCccchhhcccccccCCCceEEEeeEEEEEeeeeeeccCCCCceEEEEEEcCCCCCce
Confidence 457777776766666666643331 11244688888888877766545567888875 33469
Q ss_pred EEEEcCCHHHHHHHHHHH
Q psy8929 121 TILSAVTAGIRNNWMSAI 138 (160)
Q Consensus 121 ~~l~a~s~~e~~~Wi~al 138 (160)
|.|...++++++.|-.+|
T Consensus 99 F~lrf~nee~l~~W~~~L 116 (116)
T PF15411_consen 99 FTLRFRNEEQLEQWRSAL 116 (116)
T ss_pred EEEEeCCHHHHHHHHhhC
Confidence 999999999999998875
No 121
>KOG4236|consensus
Probab=96.03 E-value=0.012 Score=49.73 Aligned_cols=76 Identities=14% Similarity=0.264 Sum_probs=61.5
Q ss_pred eEEEEEEeCCEEEEEeCCCCccCCccceeEEcCCceeeeecCC-------CCCceEEEEeCCCcEEEEEcCC--------
Q psy8929 63 TKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPV-------ARNFGFQITTWDSKRTILSAVT-------- 127 (160)
Q Consensus 63 kkrwfvL~~~~L~yyk~~~~~~~~~~~g~I~L~~~~~v~~~~~-------~~~~~F~i~t~~~r~~~l~a~s-------- 127 (160)
++.|..|...++..|.++..+.. -..|+|+.+..|+.... ..++||+|.|.. +.||..++
T Consensus 430 krHYWrldsk~itlfqn~s~~ry---YkeIPLsEIl~v~~~~~~~~vp~~~~phcFEI~T~~--~vyfVge~p~~~~~~~ 504 (888)
T KOG4236|consen 430 KRHYWRLDSKCITLFQNESTNRY---YKEIPLSEILSVSSNNGFSLVPAGTNPHCFEIRTAT--TVYFVGENPSSTPGGE 504 (888)
T ss_pred hhhhheeccceeEeeecCCCcee---EEeecHHHhheeeccCCcccCCCCCCCceEEEEeee--EEEEecCCCCCCcccc
Confidence 45677899999999999988665 67899999988876542 468999999964 77777887
Q ss_pred ----HHHHHHHHHHHHHHhc
Q psy8929 128 ----AGIRNNWMSAIKRTAA 143 (160)
Q Consensus 128 ----~~e~~~Wi~al~~~~~ 143 (160)
.+.+..|-.||+.++.
T Consensus 505 ~g~g~d~a~~w~~ai~~alM 524 (888)
T KOG4236|consen 505 SGVGLDAAQGWETAIQQALM 524 (888)
T ss_pred ccccchhhccCchhhhhccc
Confidence 5669999999999875
No 122
>KOG3543|consensus
Probab=96.00 E-value=0.0027 Score=54.10 Aligned_cols=80 Identities=24% Similarity=0.376 Sum_probs=57.0
Q ss_pred eeeceEEEEEEeCCEEE-----EEeCCCCccCCccceeEEcCCceeeeecCC-----CCCceEEEEeCCCcEEEEEcCCH
Q psy8929 59 ITTWTKHWFVLRGCSLL-----YYRDPKAEESGVLDGVVALNNVTSLSEVPV-----ARNFGFQITTWDSKRTILSAVTA 128 (160)
Q Consensus 59 ~~~WkkrwfvL~~~~L~-----yyk~~~~~~~~~~~g~I~L~~~~~v~~~~~-----~~~~~F~i~t~~~r~~~l~a~s~ 128 (160)
.+.||+|||||-.-+-| -|...+. +| ...|.|.+.+ |.-.++ +.++-|..+-. |-+..|..+++
T Consensus 478 wkrwkkrffvlvqvsqytfamcsyrekka-ep---qel~qldgyt-vdytdp~pglqgg~~ffnavke-gdtvifasdde 551 (1218)
T KOG3543|consen 478 WKRWKKRFFVLVQVSQYTFAMCSYREKKA-EP---QELIQLDGYT-VDYTDPSPGLQGGKHFFNAVKE-GDTVIFASDDE 551 (1218)
T ss_pred HHHhHhhEEEEEEhhhhhhHhhhhhhccc-Ch---HHHhhccCee-eccCCCCCccccchHHHHHhcc-CceEEeccCch
Confidence 57899999999764433 3444333 33 5778999998 444332 33445555553 56999999999
Q ss_pred HHHHHHHHHHHHHhcc
Q psy8929 129 GIRNNWMSAIKRTAAM 144 (160)
Q Consensus 129 ~e~~~Wi~al~~~~~~ 144 (160)
+|+.-|++|+-.+.+.
T Consensus 552 qdr~lwvqamyratgq 567 (1218)
T KOG3543|consen 552 QDRHLWVQAMYRATGQ 567 (1218)
T ss_pred hhhhHHHHHHHHhhCC
Confidence 9999999999998773
No 123
>PF15410 PH_9: Pleckstrin homology domain; PDB: 1WJM_A 1BTN_A 1MPH_A.
Probab=95.95 E-value=0.0047 Score=41.95 Aligned_cols=75 Identities=19% Similarity=0.296 Sum_probs=37.4
Q ss_pred CCCCceEEEEEEeCCeEEEeeCCCccc-----------CCcccceeecccceeecccccccceeeeeeeceEEEEEEeCC
Q psy8929 4 KKHTWTKHWFVLRGCSLLYYRDPKAEE-----------SGVLDGVVALNNVTSLSEVPVARNFGFQITTWTKHWFVLRGC 72 (160)
Q Consensus 4 ~~~~Wkkrwfvl~~~~L~yy~~~~~~~-----------~~~l~g~i~l~~~~~~~~~~~~kk~g~~~~~WkkrwfvL~~~ 72 (160)
..+.|+..|+||+++.|+.|++..... ...+.+.|+|..+.... ..+..|+...+ + +.+.++
T Consensus 22 ~~R~Wk~~y~vL~g~~L~~~k~~~~~~~~~~~~~~~~~~~~p~~~i~L~~a~a~~-a~dY~Kr~~VF---r---L~~~dg 94 (119)
T PF15410_consen 22 SKRSWKQVYAVLQGGQLYFYKDEKSPASSTPPDIQSVENAKPDSSISLHHALAEI-ASDYTKRKNVF---R---LRTADG 94 (119)
T ss_dssp S---EEEEEEEEETTEEEEESSHHHHCCT-BS---SS--E-----EE-TT-EEEE-ETTBTTCSSEE---E---EE-TTS
T ss_pred CCCCccEEeEEEECCEEEEEccCcccccCCcccccccccCcceeEEEecceEEEe-CcccccCCeEE---E---EEeCCC
Confidence 357899999999999999999943211 11234568888766544 33333322211 0 134467
Q ss_pred EEEEEeCCCCccC
Q psy8929 73 SLLYYRDPKAEES 85 (160)
Q Consensus 73 ~L~yyk~~~~~~~ 85 (160)
.-++|...+..+.
T Consensus 95 ~e~Lfqa~~~~~m 107 (119)
T PF15410_consen 95 SEYLFQASDEEEM 107 (119)
T ss_dssp -EEEEE-SSHHHH
T ss_pred CEEEEECCCHHHH
Confidence 7777776665544
No 124
>KOG1738|consensus
Probab=95.91 E-value=0.0018 Score=54.81 Aligned_cols=38 Identities=32% Similarity=0.636 Sum_probs=33.2
Q ss_pred CCCceEEEEEEeCCeEEEeeCCCcccCCcccceeeccccee
Q psy8929 5 KHTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTS 45 (160)
Q Consensus 5 ~~~Wkkrwfvl~~~~L~yy~~~~~~~~~~l~g~i~l~~~~~ 45 (160)
+..|+|-||||+|+.|++|++...+.+ .++|.|.....
T Consensus 578 ~~kW~k~~~~l~~~~l~~y~n~~~~~~---e~~i~l~~~~i 615 (638)
T KOG1738|consen 578 QEKWRKIWMVLNDDPLLNYRNHRVRAA---ESVIKLPLFTI 615 (638)
T ss_pred HHHhhhheeeecCchhhhhhhhhhhch---hheeeccchhh
Confidence 346999999999999999999999888 89998887543
No 125
>KOG1739|consensus
Probab=95.59 E-value=0.0041 Score=51.27 Aligned_cols=66 Identities=20% Similarity=0.358 Sum_probs=45.5
Q ss_pred CCCceEEEEEEeCCeEEEeeCCCcccCCcccceeecccceeecccccccceeeeeeeceEEEEEEeCCEEEEEeCCCC
Q psy8929 5 KHTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPVARNFGFQITTWTKHWFVLRGCSLLYYRDPKA 82 (160)
Q Consensus 5 ~~~Wkkrwfvl~~~~L~yy~~~~~~~~~~l~g~i~l~~~~~~~~~~~~kk~g~~~~~WkkrwfvL~~~~L~yyk~~~~ 82 (160)
-+.|+-|||||+++.|.||++..++.-|.. |.|-|+......... --.||++-.+....|+.+...
T Consensus 37 i~gwqdRyv~lk~g~Lsyykse~E~~hGcR-gsi~l~ka~i~ahEf-----------De~rfdIsvn~nv~~lra~~~ 102 (611)
T KOG1739|consen 37 IHGWQDRYVVLKNGALSYYKSEDETEHGCR-GSICLSKAVITAHEF-----------DECRFDISVNDNVWYLRAQDP 102 (611)
T ss_pred cccccceEEEEcccchhhhhhhhhhhcccc-eeeEeccCCcccccc-----------hhheeeeEeccceeeehhcCc
Confidence 467999999999999999999988776664 899888754321111 113555655666666665544
No 126
>cd01243 PH_MRCK MRCK (myotonic dystrophy-related Cdc42-binding kinase) pleckstrin homology (PH) domain. MRCK (myotonic dystrophy-related Cdc42-binding kinase) pleckstrin homology (PH) domain. MRCK consists of a serine/threonine kinase domain, a cysteine rich (C1) region, a PH domain and a p21 binding motif. It has been shown to promote cytoskeletal reorganization, which affects many biological processes. The MRCK PH domain is responsible for its targeting to cell to cell junctions. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=95.34 E-value=0.054 Score=36.74 Aligned_cols=39 Identities=21% Similarity=0.390 Sum_probs=27.9
Q ss_pred CCCCCceEEEEEEeCCeEEEeeCCCcccCC---cccceeecc
Q psy8929 3 NKKHTWTKHWFVLRGCSLLYYRDPKAEESG---VLDGVVALN 41 (160)
Q Consensus 3 ~~~~~Wkkrwfvl~~~~L~yy~~~~~~~~~---~l~g~i~l~ 41 (160)
+.++.|+|+|.||.+..|+.|..+.+.... ...-+||+.
T Consensus 15 ~~krGW~r~~vVv~~~Kl~lYd~e~~k~~~p~~~~~~vLdlr 56 (122)
T cd01243 15 GVKKGWQRALVVVCDFKLFLYDIAEDRASQPSVVISQVLDMR 56 (122)
T ss_pred CcccCceEEEEEEeCCEEEEEeCCccccCCccCceeEEEEcC
Confidence 346799999999999999999977654331 122355663
No 127
>KOG3751|consensus
Probab=95.31 E-value=0.013 Score=48.87 Aligned_cols=31 Identities=39% Similarity=0.714 Sum_probs=24.8
Q ss_pred CCCCceEEEEEEeCCeEEEeeCCCcccCCcc
Q psy8929 4 KKHTWTKHWFVLRGCSLLYYRDPKAEESGVL 34 (160)
Q Consensus 4 ~~~~Wkkrwfvl~~~~L~yy~~~~~~~~~~l 34 (160)
-.|.|||.+||||...|||+......+...|
T Consensus 329 gkKsWKk~yf~LR~SGLYys~K~tsk~~r~L 359 (622)
T KOG3751|consen 329 GKKSWKKHYFVLRRSGLYYSTKGTSKEPRHL 359 (622)
T ss_pred ccccceeEEEEEecCcceEccCCCCCCchhh
Confidence 3788999999999999999977665554333
No 128
>KOG3727|consensus
Probab=95.20 E-value=0.0019 Score=53.97 Aligned_cols=82 Identities=11% Similarity=0.148 Sum_probs=54.3
Q ss_pred eeeeeceEEEEEEeC----CEEEEEeCCCCccCCccceeEEcCCceeeeecCC-CCCc-eEEE--EeCCCcEEEEEcCCH
Q psy8929 57 FQITTWTKHWFVLRG----CSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPV-ARNF-GFQI--TTWDSKRTILSAVTA 128 (160)
Q Consensus 57 ~~~~~WkkrwfvL~~----~~L~yyk~~~~~~~~~~~g~I~L~~~~~v~~~~~-~~~~-~F~i--~t~~~r~~~l~a~s~ 128 (160)
+..+..++.||...+ ..+.||++. ..| .+.|.+.+|.....++. +.++ -|-| .-+..-.+||.|+++
T Consensus 370 ~~~Kg~kr~f~t~~dl~~~~~~s~~~s~--~ap---~~~i~l~gcev~~dV~~~~~k~~i~l~~~~~~~msEi~LRCd~E 444 (664)
T KOG3727|consen 370 LTLKGYKRYFFTFRDLHLSLYKSSEDSR--GAP---AISINLKGCEVTPDVNLSQQKYAIKLLVPTAEGMSEIWLRCDNE 444 (664)
T ss_pred hhhhhhhhHHHHHHHHHHHHHhhHhhhc--CCC---CCchhhcCcccCCccccccccceEEEEeecCCccceeEEecCCH
Confidence 345666666665554 455555555 233 58899999986555544 2222 2333 334345899999999
Q ss_pred HHHHHHHHHHHHHhc
Q psy8929 129 GIRNNWMSAIKRTAA 143 (160)
Q Consensus 129 ~e~~~Wi~al~~~~~ 143 (160)
+....||.|.+-|..
T Consensus 445 ~QYA~WMAaCrLASK 459 (664)
T KOG3727|consen 445 QQYARWMAACRLASK 459 (664)
T ss_pred HHHHHHHHHhhHhhc
Confidence 999999999998766
No 129
>KOG0705|consensus
Probab=94.79 E-value=0.023 Score=48.01 Aligned_cols=35 Identities=23% Similarity=0.291 Sum_probs=32.2
Q ss_pred ceEEEEeCCCcEEEEEcCCHHHHHHHHHHHHHHhc
Q psy8929 109 FGFQITTWDSKRTILSAVTAGIRNNWMSAIKRTAA 143 (160)
Q Consensus 109 ~~F~i~t~~~r~~~l~a~s~~e~~~Wi~al~~~~~ 143 (160)
++|.|+...+.++.|.|.+-+|++.||+||+.-|-
T Consensus 446 e~F~IVs~tgqtWhFeAtt~EERdaWvQai~sqIl 480 (749)
T KOG0705|consen 446 ECFEIVSNTGQTWHFEATTYEERDAWVQAIQSQIL 480 (749)
T ss_pred ceEEEeccccchhhhhhcchhhHHHHHHHHHHHHH
Confidence 59999988889999999999999999999998765
No 130
>KOG1451|consensus
Probab=94.72 E-value=0.055 Score=45.95 Aligned_cols=81 Identities=15% Similarity=0.290 Sum_probs=52.5
Q ss_pred eeeceEEEEEEeCCE--EEEE--eCCCCccCCccceeEEcCCceeeeecCC-CCCceEEEEeCCC-cEEEEEcCCHHHHH
Q psy8929 59 ITTWTKHWFVLRGCS--LLYY--RDPKAEESGVLDGVVALNNVTSLSEVPV-ARNFGFQITTWDS-KRTILSAVTAGIRN 132 (160)
Q Consensus 59 ~~~WkkrwfvL~~~~--L~yy--k~~~~~~~~~~~g~I~L~~~~~v~~~~~-~~~~~F~i~t~~~-r~~~l~a~s~~e~~ 132 (160)
.+.|-+.||+..... +..- ........| ...++.|..|.. ...+. .+.+||.|.+.+. -+..++|-+++++.
T Consensus 280 g~sWvKyYC~Y~retk~~TMvp~~qk~g~k~g-~~~~~~lKsC~R-RktdSIdKRFCFDve~~erpgviTmQALSE~drr 357 (812)
T KOG1451|consen 280 GKSWVKYYCVYSRETKIFTMVPANQKTGTKMG-QTATFKLKSCSR-RKTDSIDKRFCFDVEVEERPGVITMQALSEKDRR 357 (812)
T ss_pred cchhhhheeEeecccceEEEeecccCCCCcCC-CcceEEehhhcc-CcccccccceeeeeeecccCCeeehHhhhhhHHH
Confidence 468999999987632 2221 111111211 134466666652 22222 6789999987541 38999999999999
Q ss_pred HHHHHHHHH
Q psy8929 133 NWMSAIKRT 141 (160)
Q Consensus 133 ~Wi~al~~~ 141 (160)
.||.|+--+
T Consensus 358 lWmeAMDG~ 366 (812)
T KOG1451|consen 358 LWMEAMDGA 366 (812)
T ss_pred HHHHHhcCC
Confidence 999999765
No 131
>cd01255 PH_TIAM TIAM Pleckstrin homology (PH) domain. TIAM Pleckstrin homology (PH) domain. TIAM (T-cell invasion and metastasis) is a guanine nucleotide exchange factor specific for RAC1. It consists of an N-terminal PH domain followed by Raf-like ras binding domain(RDB), a PDZ domain, a RhoGEF (DH) domain and a PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. This subfamily contains the alignment of the PH domain that follows the DH domain.
Probab=94.71 E-value=0.4 Score=33.57 Aligned_cols=78 Identities=17% Similarity=0.344 Sum_probs=51.0
Q ss_pred EEEEEeCCEEEEEeCCCCccCCc----------------cceeEEcCCceeeeecCC---CCCceEEEEeCC-------C
Q psy8929 65 HWFVLRGCSLLYYRDPKAEESGV----------------LDGVVALNNVTSLSEVPV---ARNFGFQITTWD-------S 118 (160)
Q Consensus 65 rwfvL~~~~L~yyk~~~~~~~~~----------------~~g~I~L~~~~~v~~~~~---~~~~~F~i~t~~-------~ 118 (160)
-=||++...+..|++........ .+-.|++.... |..... ...+.++|++.. .
T Consensus 52 ~~FVFK~AVVlv~ke~~K~KkKl~~~~r~~~~~e~dp~rfr~miP~~alQ-VR~~n~ad~e~~~vwEliH~kSe~egRpE 130 (160)
T cd01255 52 MCFVFKSAVVLVYKERLKQKKKLMGVSRKNATNEVDPFRFRVLIPVTALQ-VRASSAADMESNFLWELIHLKSELEGRPE 130 (160)
T ss_pred EEEEecceEEEEEcCcchhhhccccccccccccccCceeEEEeeceeeee-eecCCCcCcccceEEEEEeecccccCCCc
Confidence 45788888888888765532210 01134444443 333222 345788887421 2
Q ss_pred cEEEEEcCCHHHHHHHHHHHHHHhc
Q psy8929 119 KRTILSAVTAGIRNNWMSAIKRTAA 143 (160)
Q Consensus 119 r~~~l~a~s~~e~~~Wi~al~~~~~ 143 (160)
++|.||+.+++.++.-|..|++.+.
T Consensus 131 ~vfqLCcS~~E~k~~flK~Irsilr 155 (160)
T cd01255 131 KVFVLCCSTAESRNAFLKTIRSILR 155 (160)
T ss_pred ceEEEecCCHHHHHHHHHHHHHHHH
Confidence 6999999999999999999999775
No 132
>KOG4424|consensus
Probab=94.65 E-value=0.061 Score=45.46 Aligned_cols=82 Identities=15% Similarity=0.139 Sum_probs=62.8
Q ss_pred eeeeceEEEEEEe---CCEEEEEeCCCCccCCccceeEEcCCceeeeecCC---CCCceEEEEeCCCcEEEEEcCCHHHH
Q psy8929 58 QITTWTKHWFVLR---GCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPV---ARNFGFQITTWDSKRTILSAVTAGIR 131 (160)
Q Consensus 58 ~~~~WkkrwfvL~---~~~L~yyk~~~~~~~~~~~g~I~L~~~~~v~~~~~---~~~~~F~i~t~~~r~~~l~a~s~~e~ 131 (160)
....|..-|+++- +-.++.|..+++... ...|+|.++..-.+-.. ...++|.++.. ...++|.|+|++-.
T Consensus 509 ~~~~g~~a~~~vP~~d~~~~~~Yg~~qDv~a---~~~iPl~~~~v~~pe~~~~~D~~~~~k~~~s-~~~~~~~a~~~q~q 584 (623)
T KOG4424|consen 509 AGKTGILAWSVVPKSDPLVDYSYGSPQDVRA---QATIPLPGVEVTIPEFVRREDLFHVFKLVQS-HLSWHLAADDEQLQ 584 (623)
T ss_pred cCccceeeeeeccCCCCccccccCCcccccc---ccccccCccccCCCcccccchhcchhhhhhh-cceeeeccCCHHHH
Confidence 5578999999874 467888988888555 78899999884222111 34466667665 47999999999999
Q ss_pred HHHHHHHHHHhc
Q psy8929 132 NNWMSAIKRTAA 143 (160)
Q Consensus 132 ~~Wi~al~~~~~ 143 (160)
+.|++.|..|..
T Consensus 585 q~wl~~l~~A~~ 596 (623)
T KOG4424|consen 585 QRWLEVLLLAVS 596 (623)
T ss_pred HHHHHHHHhhhc
Confidence 999999999876
No 133
>KOG2070|consensus
Probab=94.55 E-value=0.1 Score=43.46 Aligned_cols=74 Identities=12% Similarity=0.238 Sum_probs=55.6
Q ss_pred eEEEEEEeCCEEEEEeCCCC---ccCCccceeEEcCCceeeeecCC--CCCceEEEEeCCCcEEEEEcCCHHHHHHHHHH
Q psy8929 63 TKHWFVLRGCSLLYYRDPKA---EESGVLDGVVALNNVTSLSEVPV--ARNFGFQITTWDSKRTILSAVTAGIRNNWMSA 137 (160)
Q Consensus 63 kkrwfvL~~~~L~yyk~~~~---~~~~~~~g~I~L~~~~~v~~~~~--~~~~~F~i~t~~~r~~~l~a~s~~e~~~Wi~a 137 (160)
+.|||+|-...|.++.-... .-. .|.++++|.. |...++ ...+.|+|..+.-......+..+.+..+|+.+
T Consensus 326 ~dRy~~LF~~~llflsvs~rMs~fIy---egKlp~tG~i-V~klEdte~~~nafeis~~ti~rIv~~c~~~~~l~~wve~ 401 (661)
T KOG2070|consen 326 KDRYLLLFPNVLLFLSVSPRMSGFIY---EGKLPTTGMI-VTKLEDTENHRNAFEISGSTIERIVVSCNNQQDLQEWVEH 401 (661)
T ss_pred hhheeeeccceeeeeEeccccchhhh---ccccccceeE-EeehhhhhcccccccccccchhheeeccCChHHHHHHHHH
Confidence 47999999988887765443 222 4788888887 555443 46788999755444677889999999999999
Q ss_pred HHH
Q psy8929 138 IKR 140 (160)
Q Consensus 138 l~~ 140 (160)
++.
T Consensus 402 ln~ 404 (661)
T KOG2070|consen 402 LNK 404 (661)
T ss_pred hhh
Confidence 996
No 134
>PLN02866 phospholipase D
Probab=93.89 E-value=0.061 Score=48.62 Aligned_cols=26 Identities=31% Similarity=0.583 Sum_probs=22.6
Q ss_pred CCceEEEEEEeCCeEEEeeCCCcccC
Q psy8929 6 HTWTKHWFVLRGCSLLYYRDPKAEES 31 (160)
Q Consensus 6 ~~Wkkrwfvl~~~~L~yy~~~~~~~~ 31 (160)
-+|.||||||++++|+|..++.+...
T Consensus 216 ~~w~k~w~v~k~~~l~~~~~p~~~~~ 241 (1068)
T PLN02866 216 DNWQKVWAVLKPGFLALLEDPFDAKP 241 (1068)
T ss_pred CchheeEEEEeccEEEEEecCCCCce
Confidence 47999999999999999988876554
No 135
>KOG0592|consensus
Probab=93.81 E-value=0.31 Score=41.28 Aligned_cols=71 Identities=21% Similarity=0.192 Sum_probs=51.5
Q ss_pred ceEEEEEEeC-CEEEEEeCCCCccCCccceeEEcCCceeeeecCCCCCceEEEEeCCCcEEEEEcCCHHHHHHHHHHHHH
Q psy8929 62 WTKHWFVLRG-CSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPVARNFGFQITTWDSKRTILSAVTAGIRNNWMSAIKR 140 (160)
Q Consensus 62 WkkrwfvL~~-~~L~yyk~~~~~~~~~~~g~I~L~~~~~v~~~~~~~~~~F~i~t~~~r~~~l~a~s~~e~~~Wi~al~~ 140 (160)
-++|.|+|+. ..|.|+...+. . ..|.|++..+..++.. ....|.|.||+ ++|+|- +-+.....|..+|.+
T Consensus 465 ~rkr~lllTn~~rll~~~~~~~-~---lk~eip~~~~~~~e~~---n~~~~~i~TP~-k~~~l~-d~~~~as~w~~ai~~ 535 (604)
T KOG0592|consen 465 ARKRMLLLTNGPRLLYVDPQNL-V---LKGEIPWSPDLRVELK---NSSTFFIHTPN-KVYYLE-DPEQRASVWCKAIET 535 (604)
T ss_pred hceeEEEecCCCeEEEEecccc-e---eccccccCcccceeec---cCcceEEECCc-cceecc-CcccchhHHHHhhhh
Confidence 3568888886 56666663333 2 2688998886644443 45689999997 899884 456778999999999
Q ss_pred H
Q psy8929 141 T 141 (160)
Q Consensus 141 ~ 141 (160)
.
T Consensus 536 ~ 536 (604)
T KOG0592|consen 536 V 536 (604)
T ss_pred h
Confidence 7
No 136
>PF04714 BCL_N: BCL7, N-terminal conserver region; InterPro: IPR006804 The members of this group of sequences contain a conserved N-terminal domain which is found in the BCL7 family. The function of BCL7 proteins is unknown, though they may be involved in early development. Notably, BCL7B is commonly hemizygously deleted in patients with Williams syndrome [].
Probab=93.24 E-value=0.019 Score=32.60 Aligned_cols=22 Identities=32% Similarity=0.750 Sum_probs=19.6
Q ss_pred CCCCCceEEEEEEeCCeEEEee
Q psy8929 3 NKKHTWTKHWFVLRGCSLLYYR 24 (160)
Q Consensus 3 ~~~~~Wkkrwfvl~~~~L~yy~ 24 (160)
.+.+.|.|+|..+.|.+|.-|+
T Consensus 25 ekVr~wEKKWVtv~dtslriyK 46 (52)
T PF04714_consen 25 EKVRKWEKKWVTVGDTSLRIYK 46 (52)
T ss_pred HHHHHHhhceEEeccceEEEEE
Confidence 4567899999999999999986
No 137
>cd01220 PH_CDEP Chondrocyte-derived ezrin-like domain containing protein (CDEP) Pleckstrin homology (PH) domain. Chondrocyte-derived ezrin-like domain containing protein (CDEP) Pleckstrin homology (PH) domain. CDEP consists of a Ferm domain, a rhoGEF (DH) domain followed by two PH domains. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=93.14 E-value=0.51 Score=30.91 Aligned_cols=45 Identities=18% Similarity=0.222 Sum_probs=28.6
Q ss_pred CCCceEEEEEEeCCeEEEeeCCCcccCCcccceeecccceeecccc
Q psy8929 5 KHTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVP 50 (160)
Q Consensus 5 ~~~Wkkrwfvl~~~~L~yy~~~~~~~~~~l~g~i~l~~~~~~~~~~ 50 (160)
...|+|+||.+.|--|++.+.+.+...-...|.|+|.++. +.+.+
T Consensus 14 k~~~~R~~FLFnD~LlY~~~~~~~~~~y~~~~~i~L~~~~-V~~~~ 58 (99)
T cd01220 14 KGLQQRMFFLFSDLLLYTSKSPTDQNSFRILGHLPLRGML-TEESE 58 (99)
T ss_pred CCCceEEEEEccceEEEEEeecCCCceEEEEEEEEcCceE-Eeecc
Confidence 4578888888888766666655433211235899999864 44433
No 138
>KOG1737|consensus
Probab=92.99 E-value=0.053 Score=47.74 Aligned_cols=79 Identities=18% Similarity=0.267 Sum_probs=54.2
Q ss_pred eeeeceEEEEEEeCCEEEEEeCCCCccCCccceeEEcCCceeeeecCCCCCceEEEEeCCCcEEEEEcCCHHHHHHHHHH
Q psy8929 58 QITTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPVARNFGFQITTWDSKRTILSAVTAGIRNNWMSA 137 (160)
Q Consensus 58 ~~~~WkkrwfvL~~~~L~yyk~~~~~~~~~~~g~I~L~~~~~v~~~~~~~~~~F~i~t~~~r~~~l~a~s~~e~~~Wi~a 137 (160)
..+.|.+|||+|.++.|.||++...... ...|.|++.... +... ....+.+.......+++.+.+..+...|+.+
T Consensus 89 ~~~~~~~r~f~l~~g~ls~~~~~~~~~~-~~~~~~~~~~a~-i~~~---~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~ 163 (799)
T KOG1737|consen 89 YSKGPSSRWFVLSGGLLSYYFDNSFSKT-TCGGGINLVTAW-IQNG---ERMDICSVDGSCQIYLVELSKKLQRQGWLHA 163 (799)
T ss_pred ccCCcccceEEecCcceeeeccCCcccc-CCCCcccccccc-cccC---CCcccchhhcccchhhhhhhHHHhhcchhhh
Confidence 5688999999999999999998876433 114566664443 2221 2222333322236788999999999999999
Q ss_pred HHHH
Q psy8929 138 IKRT 141 (160)
Q Consensus 138 l~~~ 141 (160)
++.+
T Consensus 164 ~~l~ 167 (799)
T KOG1737|consen 164 LELA 167 (799)
T ss_pred hhhc
Confidence 9886
No 139
>PF15405 PH_5: Pleckstrin homology domain; PDB: 2Z0Q_A.
Probab=92.97 E-value=0.2 Score=34.86 Aligned_cols=35 Identities=20% Similarity=0.354 Sum_probs=24.5
Q ss_pred CCceEEEEeCC--CcEEEEEcCCHHHHHHHHHHHHHH
Q psy8929 107 RNFGFQITTWD--SKRTILSAVTAGIRNNWMSAIKRT 141 (160)
Q Consensus 107 ~~~~F~i~t~~--~r~~~l~a~s~~e~~~Wi~al~~~ 141 (160)
..|.|.|..-+ +..|.|.|+|+.++++|+++|.++
T Consensus 98 ~~yp~~~~hlG~~~~~~TLyA~s~~~R~~W~e~I~~q 134 (135)
T PF15405_consen 98 SLYPFTFRHLGRKGYSYTLYASSAQARQKWLEKIEEQ 134 (135)
T ss_dssp SEEEEEE---GGG-EEEEEE-SSHHHHHHHHHHHHHH
T ss_pred CccCEEEEEcCCCceEEEEEeCCHHHHHHHHHHHHhc
Confidence 34667776543 246799999999999999999874
No 140
>KOG0517|consensus
Probab=92.06 E-value=0.0034 Score=58.72 Aligned_cols=86 Identities=16% Similarity=0.285 Sum_probs=61.4
Q ss_pred eeeeceEEEEEEeCCEEEEEeCCCCccCC---ccceeEEcCCcee-eeecCC--CCCceEEEEeCCCcEEEEEcCCHHHH
Q psy8929 58 QITTWTKHWFVLRGCSLLYYRDPKAEESG---VLDGVVALNNVTS-LSEVPV--ARNFGFQITTWDSKRTILSAVTAGIR 131 (160)
Q Consensus 58 ~~~~WkkrwfvL~~~~L~yyk~~~~~~~~---~~~g~I~L~~~~~-v~~~~~--~~~~~F~i~t~~~r~~~l~a~s~~e~ 131 (160)
....|..-||++..+.|.+|+|.+....+ ...|...|.-... |....+ .++++|.+..++|..|.|.|.++++|
T Consensus 2319 ~nRsw~~vy~~i~e~el~fykD~k~~~a~ve~~~r~e~~lel~~a~i~~a~dy~kkk~v~~l~~~~gae~llq~k~ee~m 2398 (2473)
T KOG0517|consen 2319 SNRSWDNVYCRIREKELGFYKDAKKDLASVELLVRGEPPLELDMAAIEVASDYHKKKHVFLLQLPPGAEHLLQAKDEEEM 2398 (2473)
T ss_pred hcccHHHHHHHHHhccchhhcccCcccccchhhccCCcchhcchhHHHHHHHHHHHhHhhhhcCCchHHHHHhhccHHHH
Confidence 35779999999999999999998764431 1122222221111 111111 57899999998899999999999999
Q ss_pred HHHHHHHHHHhc
Q psy8929 132 NNWMSAIKRTAA 143 (160)
Q Consensus 132 ~~Wi~al~~~~~ 143 (160)
+.|+.++.....
T Consensus 2399 ~sWL~~~a~~~~ 2410 (2473)
T KOG0517|consen 2399 ESWLRALAVKRA 2410 (2473)
T ss_pred HHHHHHHHHHHH
Confidence 999999988764
No 141
>KOG2059|consensus
Probab=90.34 E-value=0.18 Score=43.79 Aligned_cols=39 Identities=23% Similarity=0.421 Sum_probs=31.0
Q ss_pred CCCceEEEEEEeCCeEEEeeCCCcccCCcccceeecccceeec
Q psy8929 5 KHTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLS 47 (160)
Q Consensus 5 ~~~Wkkrwfvl~~~~L~yy~~~~~~~~~~l~g~i~l~~~~~~~ 47 (160)
++++|||||-|+++.|.|-+++.... .+.|+|+++..+.
T Consensus 583 ~~~FKKryf~LT~~~Ls~~Ksp~~q~----~~~Ipl~nI~avE 621 (800)
T KOG2059|consen 583 KKNFKKRYFRLTTEELSYAKSPGKQP----IYTIPLSNIRAVE 621 (800)
T ss_pred hhhhhheEEEeccceeEEecCCccCc----ccceeHHHHHHHH
Confidence 47899999999999999999885432 4788888765444
No 142
>KOG1737|consensus
Probab=90.20 E-value=0.24 Score=43.80 Aligned_cols=38 Identities=32% Similarity=0.484 Sum_probs=29.7
Q ss_pred CCCCCceEEEEEEeCCeEEEeeCCCcccCCcccceeecc
Q psy8929 3 NKKHTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALN 41 (160)
Q Consensus 3 ~~~~~Wkkrwfvl~~~~L~yy~~~~~~~~~~l~g~i~l~ 41 (160)
+..+.|++|||||.++.|.||++........ .|.|++.
T Consensus 88 n~~~~~~~r~f~l~~g~ls~~~~~~~~~~~~-~~~~~~~ 125 (799)
T KOG1737|consen 88 NYSKGPSSRWFVLSGGLLSYYFDNSFSKTTC-GGGINLV 125 (799)
T ss_pred cccCCcccceEEecCcceeeeccCCccccCC-CCccccc
Confidence 4578899999999999999999887665533 3666654
No 143
>KOG1170|consensus
Probab=89.93 E-value=0.011 Score=51.71 Aligned_cols=80 Identities=10% Similarity=0.082 Sum_probs=56.9
Q ss_pred eeeceEEEEEEeCCE-EEEEeCCCCccCCccceeEEcCCceeeeecCCCCCceEEEEeCCCcEEEEEcCCHHHHHHHHHH
Q psy8929 59 ITTWTKHWFVLRGCS-LLYYRDPKAEESGVLDGVVALNNVTSLSEVPVARNFGFQITTWDSKRTILSAVTAGIRNNWMSA 137 (160)
Q Consensus 59 ~~~WkkrwfvL~~~~-L~yyk~~~~~~~~~~~g~I~L~~~~~v~~~~~~~~~~F~i~t~~~r~~~l~a~s~~e~~~Wi~a 137 (160)
...|+.|++.+++.. ++|.+...... --.+++......+..+...++.|.|+++- ++..+||++..||..||.+
T Consensus 15 ~Ea~k~r~~~~k~~~~~~vakTa~g~~----~~~~d~t~a~~~eSs~~n~~~sf~vi~~~-rk~r~~adn~ke~e~wi~~ 89 (1099)
T KOG1170|consen 15 REAWKQSILRAKDRMPEKVAKTASGPL----FALLDLTSAHVAESSTNNPRPSFCVITPV-RKHRLCADNRKEMEKWINQ 89 (1099)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCcc----HHHHhcccccccccccCCCCCCeeEeccc-HHhhhhccchhHHHHhhcc
Confidence 346777777777765 44544443322 35566777664333344667899999985 8999999999999999999
Q ss_pred HHHHhc
Q psy8929 138 IKRTAA 143 (160)
Q Consensus 138 l~~~~~ 143 (160)
++...+
T Consensus 90 ~kt~q~ 95 (1099)
T KOG1170|consen 90 SKTPQH 95 (1099)
T ss_pred ccchhh
Confidence 988654
No 144
>KOG3520|consensus
Probab=89.08 E-value=1.2 Score=41.00 Aligned_cols=54 Identities=24% Similarity=0.332 Sum_probs=40.1
Q ss_pred ceeEEcCCceeeeecCCCCCceEEEEeC--CCcEEEEEcCCHHHHHHHHHHHHHHhc
Q psy8929 89 DGVVALNNVTSLSEVPVARNFGFQITTW--DSKRTILSAVTAGIRNNWMSAIKRTAA 143 (160)
Q Consensus 89 ~g~I~L~~~~~v~~~~~~~~~~F~i~t~--~~r~~~l~a~s~~e~~~Wi~al~~~~~ 143 (160)
-.+|.|.... |..+....+--|-|.+. +...|-|.|.|..|++.||+.|+.++.
T Consensus 667 spVisL~~li-vRevAtd~ka~FlIs~s~~~pqmYEL~a~T~serntW~~li~~~v~ 722 (1167)
T KOG3520|consen 667 SPVISLQKLI-VREVATDEKAFFLISMSDQGPEMYELVAQSKSERNTWIQLIQDAVA 722 (1167)
T ss_pred CCceehHHHH-HHHHhccccceEEEecCCCCCeeEEEecCCHHHHHHHHHHHHHHHH
Confidence 3678888873 55554434445555554 236899999999999999999999887
No 145
>KOG1738|consensus
Probab=88.91 E-value=0.065 Score=45.68 Aligned_cols=39 Identities=33% Similarity=0.644 Sum_probs=34.2
Q ss_pred eeceEEEEEEeCCEEEEEeCCCCccCCccceeEEcCCceeeee
Q psy8929 60 TTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSE 102 (160)
Q Consensus 60 ~~WkkrwfvL~~~~L~yyk~~~~~~~~~~~g~I~L~~~~~v~~ 102 (160)
..|++-||||.+..|+.|.++....+ .++|.|...+ |..
T Consensus 579 ~kW~k~~~~l~~~~l~~y~n~~~~~~---e~~i~l~~~~-i~~ 617 (638)
T KOG1738|consen 579 EKWRKIWMVLNDDPLLNYRNHRVRAA---ESVIKLPLFT-ISV 617 (638)
T ss_pred HHhhhheeeecCchhhhhhhhhhhch---hheeeccchh-hhh
Confidence 45999999999999999999999887 7999999888 443
No 146
>KOG1264|consensus
Probab=87.88 E-value=1.1 Score=39.85 Aligned_cols=55 Identities=15% Similarity=0.216 Sum_probs=39.1
Q ss_pred ceeEEcCCceeeeecCC--CCCceEEEE--eCCCcEEEEEcCCHHHHHHHHHHHHHHhc
Q psy8929 89 DGVVALNNVTSLSEVPV--ARNFGFQIT--TWDSKRTILSAVTAGIRNNWMSAIKRTAA 143 (160)
Q Consensus 89 ~g~I~L~~~~~v~~~~~--~~~~~F~i~--t~~~r~~~l~a~s~~e~~~Wi~al~~~~~ 143 (160)
.|..++..+..|..... .+.+.|.|. +-..-.|.|.|++.+|+.+|+++|+.+..
T Consensus 853 rgi~d~~~~nvv~~~q~~n~~~~vf~l~~~~~~~~~~~~aadsqEe~~eW~k~i~E~t~ 911 (1267)
T KOG1264|consen 853 RGILDLNTYNVVKAPQGKNQKSFVFILEPKWQGKPPVEFAADSQEELFEWFKSIREITW 911 (1267)
T ss_pred hccccccccceeecccccCCcceEEEechhhhcCCceEEecCchHHHHHHHHHHHHHHH
Confidence 35666666664444332 456777775 22345899999999999999999999765
No 147
>KOG3551|consensus
Probab=87.87 E-value=1.1 Score=36.62 Aligned_cols=37 Identities=24% Similarity=0.387 Sum_probs=33.3
Q ss_pred CCceEEEEeCCCc-EEEEEcCCHHHHHHHHHHHHHHhc
Q psy8929 107 RNFGFQITTWDSK-RTILSAVTAGIRNNWMSAIKRTAA 143 (160)
Q Consensus 107 ~~~~F~i~t~~~r-~~~l~a~s~~e~~~Wi~al~~~~~ 143 (160)
.+.+|+|.+|+++ +..|.|.+..+.+.|..||..+++
T Consensus 235 EnR~lEihSpdg~~tliLR~kdsa~A~~Wf~AiHa~v~ 272 (506)
T KOG3551|consen 235 ENRQLEIHSPDGRHTLILRAKDSAEADSWFEAIHANVN 272 (506)
T ss_pred ccceeeeeCCCCcceEEEEccCcHHHHHHHHHHHHHHh
Confidence 4568999999886 899999999999999999999876
No 148
>PF08458 PH_2: Plant pleckstrin homology-like region; InterPro: IPR013666 This domain describes a pleckstrin homology (PH)-like region found in several plant proteins of unknown function.
Probab=87.85 E-value=1.6 Score=29.24 Aligned_cols=37 Identities=11% Similarity=0.128 Sum_probs=32.3
Q ss_pred CCceEEEEeCCCcEEEEEcCCHHHHHHHHHHHHHHhcc
Q psy8929 107 RNFGFQITTWDSKRTILSAVTAGIRNNWMSAIKRTAAM 144 (160)
Q Consensus 107 ~~~~F~i~t~~~r~~~l~a~s~~e~~~Wi~al~~~~~~ 144 (160)
..+.|.|.|.. +..-|.++|..+.+.|++.|+.-+..
T Consensus 69 ~~~yfgL~T~~-G~vEfec~~~~~~k~W~~gI~~mL~~ 105 (110)
T PF08458_consen 69 ERRYFGLKTAQ-GVVEFECDSQREYKRWVQGIQHMLSQ 105 (110)
T ss_pred eEEEEEEEecC-cEEEEEeCChhhHHHHHHHHHHHHHH
Confidence 45789999985 79999999999999999999986653
No 149
>KOG3531|consensus
Probab=87.40 E-value=0.56 Score=41.60 Aligned_cols=55 Identities=18% Similarity=0.265 Sum_probs=44.1
Q ss_pred ceeEEcCCceeeeecCC--CCCceEEEEeCCCcEEEEEcCCHHHHHHHHHHHHHHhcccC
Q psy8929 89 DGVVALNNVTSLSEVPV--ARNFGFQITTWDSKRTILSAVTAGIRNNWMSAIKRTAAMSL 146 (160)
Q Consensus 89 ~g~I~L~~~~~v~~~~~--~~~~~F~i~t~~~r~~~l~a~s~~e~~~Wi~al~~~~~~~~ 146 (160)
.|.|++. .+ ++.++. +-+++|.|.+.. +..+.+|.+..+.+.|+..++.+|.+..
T Consensus 792 ~g~lP~~-l~-~en~en~~s~p~~~ti~~~q-k~i~vsast~~~sk~~~~~r~~~i~~~~ 848 (1036)
T KOG3531|consen 792 NGDLPLT-LT-MENSENEWSVPHCFTISGAQ-KQIYVSASTRRESKKWEFDRRKAIDLAP 848 (1036)
T ss_pred ccCCceE-ee-eecccccccCCceEEEeccc-eEEEEeccchhhhhhhhhccchhhhhcc
Confidence 5777777 33 555544 578999999875 7999999999999999999999987443
No 150
>cd01258 PH_syntrophin Syntrophin pleckstrin homology (PH) domain. Syntrophin pleckstrin homology (PH) domain. Syntrophins are peripheral membrane proteins, which associate with the Duchenne muscular dystrophy protein dystrophin and other proteins to form the dystrophin glycoprotein complex (DGC). There are five syntrophin isoforms, alpha1, beta1, beta2, gamma1, and gamma2. They all contain two PH domains, with the N-teminal PH domain interupted by a PDZ domain. The N-terminal PH domain of alpha1syntrophin binds phosphatidylinositol 4,5-bisphosphate. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=87.29 E-value=0.71 Score=30.85 Aligned_cols=24 Identities=21% Similarity=0.789 Sum_probs=21.3
Q ss_pred CCCceEEEEEEeCCeEEEeeCCCc
Q psy8929 5 KHTWTKHWFVLRGCSLLYYRDPKA 28 (160)
Q Consensus 5 ~~~Wkkrwfvl~~~~L~yy~~~~~ 28 (160)
.++||-|+++|+++.|+.|..+--
T Consensus 16 ~~~wrP~F~aL~~~dl~ly~s~P~ 39 (108)
T cd01258 16 SQRWRPRFLALKGSEFLFFETPPL 39 (108)
T ss_pred ccccceEEEEEcCCcEEEEeCCCC
Confidence 479999999999999999997743
No 151
>PF15404 PH_4: Pleckstrin homology domain
Probab=86.21 E-value=0.89 Score=33.33 Aligned_cols=24 Identities=25% Similarity=0.398 Sum_probs=22.0
Q ss_pred CcEEEEEcCCHHHHHHHHHHHHHH
Q psy8929 118 SKRTILSAVTAGIRNNWMSAIKRT 141 (160)
Q Consensus 118 ~r~~~l~a~s~~e~~~Wi~al~~~ 141 (160)
++.+.|.|-|..|++.||-+|...
T Consensus 161 gks~VF~ARSRqERD~WV~~I~~E 184 (185)
T PF15404_consen 161 GKSMVFMARSRQERDLWVLAINTE 184 (185)
T ss_pred CcEEEEEeccHHHHHHHHHHHHhc
Confidence 589999999999999999999754
No 152
>PF15277 Sec3-PIP2_bind: Exocyst complex component SEC3 N-terminal PIP2 binding PH; PDB: 3HIE_D 3A58_E.
Probab=85.66 E-value=5.6 Score=25.60 Aligned_cols=51 Identities=14% Similarity=0.154 Sum_probs=37.3
Q ss_pred eeEEcCCceeeeecCCC-CCceEEEEeCCCcEEEEEcCCHHHHHHHHHHHHHHh
Q psy8929 90 GVVALNNVTSLSEVPVA-RNFGFQITTWDSKRTILSAVTAGIRNNWMSAIKRTA 142 (160)
Q Consensus 90 g~I~L~~~~~v~~~~~~-~~~~F~i~t~~~r~~~l~a~s~~e~~~Wi~al~~~~ 142 (160)
..=+|.....|+..++. ....|.|... ++|+..|.|.+|+...|..|-+..
T Consensus 37 ktW~L~eL~~I~~~~~~~~~~~F~l~~~--k~y~W~a~s~~Ek~~Fi~~L~k~~ 88 (91)
T PF15277_consen 37 KTWDLDELKAIDGINPDKDTPEFDLTFD--KPYYWEASSAKEKNTFIRSLWKLY 88 (91)
T ss_dssp EEEEGGG--EEEE-SSS--TTEEEEESS--SEEEEEESSHHHHHHHHHHHHHHH
T ss_pred eEEehhhceeeeeecCCCCCcCEEEEEC--CCcEEEeCCHHHHHHHHHHHHHHh
Confidence 44667777777766542 3568999983 699999999999999999987754
No 153
>cd01262 PH_PDK1 3-Phosphoinositide dependent protein kinase 1 (PDK1) pleckstrin homology (PH) domain. 3-Phosphoinositide dependent protein kinase 1 (PDK1) pleckstrin homology (PH) domain. PDK1 contains an N-terminal serine/threonine kinase domain followed by a PH domain. Following binding of the PH domain to PtdIns(3,4,5)P3 and PtdIns(3,4)P2, PDK1 activates kinases such as Akt (PKB). PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=85.08 E-value=5.7 Score=25.56 Aligned_cols=63 Identities=21% Similarity=0.327 Sum_probs=42.2
Q ss_pred CCCceEEEEEEeCCeEEEeeCCCcccCCcccceeeccc-ceeecccccccceeeeeeeceEEEEEEeCCEEEEEeCCCC
Q psy8929 5 KHTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNN-VTSLSEVPVARNFGFQITTWTKHWFVLRGCSLLYYRDPKA 82 (160)
Q Consensus 5 ~~~Wkkrwfvl~~~~L~yy~~~~~~~~~~l~g~i~l~~-~~~~~~~~~~kk~g~~~~~WkkrwfvL~~~~L~yyk~~~~ 82 (160)
+--+|||=|+|++.-=.+|-|+..... .|.|+.+. ...+. .++- +.|+|-+++.-+|+.|...
T Consensus 12 glf~kkR~LiLTd~PrL~yvdp~~~~~---KgeIp~s~~~l~v~-----------~~~~-~~F~I~Tp~rty~leD~~~ 75 (89)
T cd01262 12 GLFAKKRQLILTNGPRLIYVDPVKKVV---KGEIPWSDVELRVE-----------VKNS-SHFFVHTPNKVYSFEDPKG 75 (89)
T ss_pred ccccceeeEEEecCceEEEEcCCcCeE---EeEecccccceEEE-----------EecC-ccEEEECCCceEEEECCCC
Confidence 445899999999765555566654333 79999987 32211 1111 5788889998888887653
No 154
>KOG4095|consensus
Probab=85.07 E-value=0.29 Score=34.29 Aligned_cols=22 Identities=32% Similarity=0.746 Sum_probs=20.3
Q ss_pred CCCCCceEEEEEEeCCeEEEee
Q psy8929 3 NKKHTWTKHWFVLRGCSLLYYR 24 (160)
Q Consensus 3 ~~~~~Wkkrwfvl~~~~L~yy~ 24 (160)
.|++.|.|+|+.+.|.+|..|+
T Consensus 26 EKVRrWEKKwVtvgDTslRIyK 47 (165)
T KOG4095|consen 26 EKVRRWEKKWVTVGDTSLRIYK 47 (165)
T ss_pred HHHHHHhhheEeecccceEEEE
Confidence 4678999999999999999997
No 155
>KOG0690|consensus
Probab=84.83 E-value=0.93 Score=36.56 Aligned_cols=23 Identities=30% Similarity=0.610 Sum_probs=19.7
Q ss_pred CCCceEEEEEEe-CCeEEEeeCCC
Q psy8929 5 KHTWTKHWFVLR-GCSLLYYRDPK 27 (160)
Q Consensus 5 ~~~Wkkrwfvl~-~~~L~yy~~~~ 27 (160)
-+||+-|+|+|. |++|+-|+..-
T Consensus 28 IknWRpRYF~l~~DG~~~Gyr~kP 51 (516)
T KOG0690|consen 28 IKNWRPRYFLLFNDGTLLGYRSKP 51 (516)
T ss_pred hhcccceEEEEeeCCceEeeccCC
Confidence 479999999997 89999998653
No 156
>PF14844 PH_BEACH: PH domain associated with Beige/BEACH; PDB: 1MI1_B 1T77_C.
Probab=84.62 E-value=5.6 Score=25.95 Aligned_cols=67 Identities=9% Similarity=0.163 Sum_probs=42.9
Q ss_pred EEEeCCEEEEEeC---------------CCCccCCccceeEEcCCceeeeecCC-CCCceEEEEeCCCcEEEEEcCCHHH
Q psy8929 67 FVLRGCSLLYYRD---------------PKAEESGVLDGVVALNNVTSLSEVPV-ARNFGFQITTWDSKRTILSAVTAGI 130 (160)
Q Consensus 67 fvL~~~~L~yyk~---------------~~~~~~~~~~g~I~L~~~~~v~~~~~-~~~~~F~i~t~~~r~~~l~a~s~~e 130 (160)
+.|....+++..+ ..... ....+++.++..|..-.= -++.+++|-..++++|+|..++.++
T Consensus 21 l~i~~~~i~F~~~~~~~~~~~~~~~~~~~~~~~---~~~~w~~~~I~~v~~RRyllr~~AlEiF~~dg~s~f~~F~~~~~ 97 (106)
T PF14844_consen 21 LIITKSSIYFIPNDNSSENKISSENPSISISKP---KSKRWPLSDIKEVHKRRYLLRDTALEIFFSDGRSYFFNFESKKE 97 (106)
T ss_dssp EEE-SSEEEEEE--TTSHHHHCS-HHHHCC------TCEEEEGGGEEEEEEEEETTEEEEEEEEETTS-EEEEE-SSHHH
T ss_pred EEEeCCEEEEEECCcccccccccccccccccCC---ceEEEEHHHhHHHHHHHhcCcceEEEEEEcCCcEEEEEcCCHHH
Confidence 4577777777665 11112 256788888776654210 3567899999999999999999999
Q ss_pred HHHHHH
Q psy8929 131 RNNWMS 136 (160)
Q Consensus 131 ~~~Wi~ 136 (160)
+++=++
T Consensus 98 R~~v~~ 103 (106)
T PF14844_consen 98 RDEVYN 103 (106)
T ss_dssp HHHHHC
T ss_pred HHHHHH
Confidence 986543
No 157
>PF06017 Myosin_TH1: Myosin tail; InterPro: IPR010926 These proteins share a region of sequence similarity with the tail of myosin (for example O00159 from SWISSPROT). Myosins act as molecular motors. ; GO: 0003774 motor activity, 0016459 myosin complex
Probab=82.88 E-value=8.3 Score=28.34 Aligned_cols=70 Identities=16% Similarity=0.147 Sum_probs=48.4
Q ss_pred ceEEEEEEeCCEEEEEe-----CCCCccCCccceeEEcCCceeeeecCCCCCceEEEEeCCCcEEEEEcCCHHHHHHHH
Q psy8929 62 WTKHWFVLRGCSLLYYR-----DPKAEESGVLDGVVALNNVTSLSEVPVARNFGFQITTWDSKRTILSAVTAGIRNNWM 135 (160)
Q Consensus 62 WkkrwfvL~~~~L~yyk-----~~~~~~~~~~~g~I~L~~~~~v~~~~~~~~~~F~i~t~~~r~~~l~a~s~~e~~~Wi 135 (160)
-..|.++|++..+|... +...... ...|+|..++.|...+- ...-|.|..++.--+.|+++...|+-.=|
T Consensus 65 ~~~R~livT~~~iY~l~~~~~~~~~~~~~---kr~i~l~~I~~IsvS~~-~D~~~vihv~~~~D~il~~~~k~Elv~~L 139 (199)
T PF06017_consen 65 PQPRILIVTDKAIYLLDQRKVKDPKKYKL---KRRIPLSDITGISVSPL-SDNFFVIHVPGEGDLILESDFKTELVTIL 139 (199)
T ss_pred ccceEEEEeCCeEEEEEEeecCCceeeEE---EeccCcccccEEEEccC-CCCEEEEEECCCCCEEEEeCcHHHHHHHH
Confidence 45799999999999985 3333332 67799999888776644 23445555455568889998886654433
No 158
>KOG4407|consensus
Probab=82.17 E-value=0.077 Score=48.87 Aligned_cols=91 Identities=19% Similarity=0.216 Sum_probs=64.9
Q ss_pred cceeeeeeeceEEEEEEeCCEEEEEeCCCCccCC-----------ccceeEEcCCcee-eeecCCCCCceEEEEeCCCcE
Q psy8929 53 RNFGFQITTWTKHWFVLRGCSLLYYRDPKAEESG-----------VLDGVVALNNVTS-LSEVPVARNFGFQITTWDSKR 120 (160)
Q Consensus 53 kk~g~~~~~WkkrwfvL~~~~L~yyk~~~~~~~~-----------~~~g~I~L~~~~~-v~~~~~~~~~~F~i~t~~~r~ 120 (160)
++-|..+..|+.-|.+|.++.|+.|++..+.... ...-.+.|.+|.. |...+..+++.|++.+.+--.
T Consensus 940 k~tGssLr~wk~~y~~l~ghsl~L~ss~re~~~~~aas~as~~~st~tts~c~nscltdI~ysetkrn~vfRLTt~d~ce 1019 (1973)
T KOG4407|consen 940 KATGSSLREWKLSYTGLHGHSLVLNSSAREHNSQSAASLASSSCSTATTSECLNSCLTDIQYSETKRNQVFRLTTNDLCE 1019 (1973)
T ss_pred cccCcchhhhhhHHHHhccccceecccccccCcchhhhhcccccccccCccccccchhhhhhhhhhhhhHHHhHHHHHHh
Confidence 3447788999999999999999999987762210 0012244444442 111122678899999877568
Q ss_pred EEEEcCCHHHHHHHHHHHHHHhc
Q psy8929 121 TILSAVTAGIRNNWMSAIKRTAA 143 (160)
Q Consensus 121 ~~l~a~s~~e~~~Wi~al~~~~~ 143 (160)
+.|.+++.++|-.|++.+++...
T Consensus 1020 ~lfqaeDrddmlgG~~ttq~St~ 1042 (1973)
T KOG4407|consen 1020 GLFQAEDRDDMLGGLSTTQSSTT 1042 (1973)
T ss_pred HhhccCccccccchhhhhhhccc
Confidence 89999999999999999977554
No 159
>KOG3523|consensus
Probab=82.05 E-value=4.6 Score=34.87 Aligned_cols=34 Identities=29% Similarity=0.486 Sum_probs=27.3
Q ss_pred CCCceEEEEeC---CC--cEEEEEcCCHHHHHHHHHHHH
Q psy8929 106 ARNFGFQITTW---DS--KRTILSAVTAGIRNNWMSAIK 139 (160)
Q Consensus 106 ~~~~~F~i~t~---~~--r~~~l~a~s~~e~~~Wi~al~ 139 (160)
+.+|.|.+.-- ++ ..+.|.|+|+.|+..||.||.
T Consensus 553 ~~~hlF~ltLl~N~~~~~~e~lL~a~s~Sd~~RWi~Al~ 591 (695)
T KOG3523|consen 553 SRPHLFLLTLLSNHQGRQTELLLSAESQSDRQRWISALR 591 (695)
T ss_pred cccceEEEehhhccCCCceeeeecCCchHHHHHHHHhcC
Confidence 45688988721 12 489999999999999999997
No 160
>KOG4047|consensus
Probab=79.51 E-value=1.3 Score=36.63 Aligned_cols=83 Identities=17% Similarity=0.145 Sum_probs=51.1
Q ss_pred eeeeeceEEEEEEeCCEE------EEEeCCCCc---cCCc-cceeEEcCCceeeeecCC----CCCceEEEEeCCCcEEE
Q psy8929 57 FQITTWTKHWFVLRGCSL------LYYRDPKAE---ESGV-LDGVVALNNVTSLSEVPV----ARNFGFQITTWDSKRTI 122 (160)
Q Consensus 57 ~~~~~WkkrwfvL~~~~L------~yyk~~~~~---~~~~-~~g~I~L~~~~~v~~~~~----~~~~~F~i~t~~~r~~~ 122 (160)
+..+.|.++|++|..+.+ ..|...... -+.. ....+-|+++.+++.... ...+.|...+.. . +
T Consensus 21 ~~~k~~~~~~~~L~~gs~~g~aRle~~~~~g~~~~~~~~~~~rR~~~ls~~~S~e~~~~~~~~~~i~~~f~~~a~-e--~ 97 (429)
T KOG4047|consen 21 FKVKNVRDDGAELGSGSMELTARLEILESRGRESVRWPYRCLRRYGYLSNLFSFESGRRCQTGPGITAFFCDRAE-E--L 97 (429)
T ss_pred hccccccccceeeeccccccchhhhhhhccCCcccccchhcceeeEeeccceeeecccccccCCCceEEEecchH-H--H
Confidence 566899999999987543 233322221 1111 126688888888777543 223343333322 2 6
Q ss_pred EEcCCHHHHHHHHHHHHHHh
Q psy8929 123 LSAVTAGIRNNWMSAIKRTA 142 (160)
Q Consensus 123 l~a~s~~e~~~Wi~al~~~~ 142 (160)
|-++..-+...||++|...+
T Consensus 98 ~~~~q~l~~~~w~~~i~~~~ 117 (429)
T KOG4047|consen 98 FNMLQDLMQANWINAIEEPA 117 (429)
T ss_pred HHHHHHHHhhhhhhhhhhcc
Confidence 77888888899999998754
No 161
>KOG3551|consensus
Probab=78.24 E-value=3.1 Score=34.00 Aligned_cols=87 Identities=14% Similarity=0.161 Sum_probs=55.2
Q ss_pred eeeeeeceEEEEEEeCCEEEEEeCCCCccC--CccceeEEcCCceeeeecCC------CCCceEEEEeCCC---cEEEEE
Q psy8929 56 GFQITTWTKHWFVLRGCSLLYYRDPKAEES--GVLDGVVALNNVTSLSEVPV------ARNFGFQITTWDS---KRTILS 124 (160)
Q Consensus 56 g~~~~~WkkrwfvL~~~~L~yyk~~~~~~~--~~~~g~I~L~~~~~v~~~~~------~~~~~F~i~t~~~---r~~~l~ 124 (160)
+.....|+..+.+|+...|.+|...-.... ..+.-+.+|-....|...+. +-...|...|... .++.|.
T Consensus 304 ~~G~~~w~P~l~~lTekelliYes~P~~keaws~P~~~ypLvaTRLvhsg~~~~s~~~g~~lsFa~RtGTrqGV~thlfr 383 (506)
T KOG3551|consen 304 GGGISQWKPKLMALTEKELLIYESMPWTKEAWSRPRHTYPLVATRLVHSGSGKGSVIKGLTLSFATRTGTRQGVETHLFR 383 (506)
T ss_pred CCChhhhhhheeeechhhhhhhhcChhhHHHhcChhhhhhhhhhhheecCCCCCCCcCCceEEEEEecccccceEEEEEE
Confidence 445778999999999999999886543110 01133333333332222211 1224677776431 599999
Q ss_pred cCCHHHHHHHHHHHHHHh
Q psy8929 125 AVTAGIRNNWMSAIKRTA 142 (160)
Q Consensus 125 a~s~~e~~~Wi~al~~~~ 142 (160)
++|..|+..|...|-+-.
T Consensus 384 vEThrdLa~WtRslVqGc 401 (506)
T KOG3551|consen 384 VETHRELAAWTRSLVQGC 401 (506)
T ss_pred eccHHHHHHHHHHHHHHH
Confidence 999999999998886643
No 162
>KOG3723|consensus
Probab=71.30 E-value=0.72 Score=39.42 Aligned_cols=78 Identities=15% Similarity=0.324 Sum_probs=45.6
Q ss_pred CCceEEEEEEeCCeEEEeeCCCcccCCcccceeecccceeecccccccceeeeeeeceEEEEEEeCCEEEEEeCCCCccC
Q psy8929 6 HTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPVARNFGFQITTWTKHWFVLRGCSLLYYRDPKAEES 85 (160)
Q Consensus 6 ~~Wkkrwfvl~~~~L~yy~~~~~~~~~~l~g~i~l~~~~~~~~~~~~kk~g~~~~~WkkrwfvL~~~~L~yyk~~~~~~~ 85 (160)
|.|+-|||.|.+..|.|-+..+..+.+ +-.|||+.+-.+.... +|++ .++-.+-|=+++...-++.|-.++...
T Consensus 752 kRW~TrYFTLSgA~L~~~kg~s~~dS~--~~~IDl~~IRSVk~v~--~kr~--~rslpKAFEIFTAD~T~ILKaKDeKNA 825 (851)
T KOG3723|consen 752 KRWKTRYFTLSGAQLLFQKGKSKDDSD--DCPIDLSKIRSVKAVA--KKRR--DRSLPKAFEIFTADKTYILKAKDEKNA 825 (851)
T ss_pred hhhccceEEecchhhhcccCCCCCCCC--CCCccHHHhhhHHHHH--hhhh--hcccchhhheeecCceEEeecccccCH
Confidence 569999999999999997755533332 2579999876655433 2222 223334444555544455554444333
Q ss_pred Cccc
Q psy8929 86 GVLD 89 (160)
Q Consensus 86 ~~~~ 89 (160)
+.|.
T Consensus 826 EEWl 829 (851)
T KOG3723|consen 826 EEWL 829 (851)
T ss_pred HHHH
Confidence 3333
No 163
>KOG2996|consensus
Probab=69.90 E-value=22 Score=30.87 Aligned_cols=82 Identities=15% Similarity=0.288 Sum_probs=55.4
Q ss_pred eceEEEEEEeCCEEEEEeCCCCccCCccceeEEcCCceeeeecCC-----------CCCceEEEEeCCC-cEEEEEcCCH
Q psy8929 61 TWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPV-----------ARNFGFQITTWDS-KRTILSAVTA 128 (160)
Q Consensus 61 ~WkkrwfvL~~~~L~yyk~~~~~~~~~~~g~I~L~~~~~v~~~~~-----------~~~~~F~i~t~~~-r~~~l~a~s~ 128 (160)
.=+.||..|-+..+...|-..++-. ....|.|.... +...+. ...+.|-|+...+ .-+.|.+.|+
T Consensus 421 tkqdRyiFLfDkvviVCKrkG~sy~--lke~i~l~~y~-m~d~~~~~kd~kk~~~~~ws~~f~lI~tqg~ngl~fy~Kte 497 (865)
T KOG2996|consen 421 TKQDRYIFLFDKVVIVCKRKGDSYE--LKEIIYLNAYK-MSDDPIDDKDNKKVSTITWSYGFYLIHTQGRNGLEFYCKTE 497 (865)
T ss_pred CccceEEeEecceEEEeeccCcchh--HHHHHHHHhhc-cccCCCCchhhhhccceeeeeeEEEEEEcCCcceEEEEecH
Confidence 3456888888888888887766432 13445555444 222111 2468888875444 4788999999
Q ss_pred HHHHHHHHHHHHHhccc
Q psy8929 129 GIRNNWMSAIKRTAAMS 145 (160)
Q Consensus 129 ~e~~~Wi~al~~~~~~~ 145 (160)
+-...||.++.-+++.-
T Consensus 498 ~~kkkWmeqfema~SNi 514 (865)
T KOG2996|consen 498 DLKKKWMEQFEMAKSNI 514 (865)
T ss_pred HHHHHHHHHHHHHHhcC
Confidence 99999999999988743
No 164
>PF10882 bPH_5: Bacterial PH domain; InterPro: IPR020482 This entry contains membrane proteins with no known function.
Probab=69.82 E-value=21 Score=22.87 Aligned_cols=30 Identities=23% Similarity=0.190 Sum_probs=21.9
Q ss_pred CCceEEEEeCCCcEEEEEcCCHHHHHHHHHHHHH
Q psy8929 107 RNFGFQITTWDSKRTILSAVTAGIRNNWMSAIKR 140 (160)
Q Consensus 107 ~~~~F~i~t~~~r~~~l~a~s~~e~~~Wi~al~~ 140 (160)
.+..+.|.|.+ ++|+|++++++++ +++|++
T Consensus 69 ~~~~i~I~t~~-~~y~isp~~~~~f---i~~l~~ 98 (100)
T PF10882_consen 69 NKNVILIKTKD-KTYVISPEDPEEF---IEALKK 98 (100)
T ss_pred CCCEEEEEECC-ceEEEcCCCHHHH---HHHHHh
Confidence 56788888987 8999988877655 445543
No 165
>PLN00188 enhanced disease resistance protein (EDR2); Provisional
Probab=67.63 E-value=6.1 Score=34.83 Aligned_cols=19 Identities=32% Similarity=0.581 Sum_probs=17.1
Q ss_pred ceEEEEEEeCCeEEEeeCC
Q psy8929 8 WTKHWFVLRGCSLLYYRDP 26 (160)
Q Consensus 8 Wkkrwfvl~~~~L~yy~~~ 26 (160)
.++|+|||++..|.||+.+
T Consensus 23 ~~~Ry~vl~~~~~~~yK~~ 41 (719)
T PLN00188 23 IHMRYFVLESRLLAYYKKK 41 (719)
T ss_pred ceeEEEEEecchhhhcccC
Confidence 5799999999999999863
No 166
>PF14470 bPH_3: Bacterial PH domain
Probab=60.17 E-value=39 Score=21.03 Aligned_cols=76 Identities=17% Similarity=0.141 Sum_probs=55.3
Q ss_pred eceEEEEEEeCCEEEEEeCCCC-ccCCccceeEEcCCceeeeecCCCCCceEEEEeCCCcEEEEEcCCHHHHHHHHHHHH
Q psy8929 61 TWTKHWFVLRGCSLLYYRDPKA-EESGVLDGVVALNNVTSLSEVPVARNFGFQITTWDSKRTILSAVTAGIRNNWMSAIK 139 (160)
Q Consensus 61 ~WkkrwfvL~~~~L~yyk~~~~-~~~~~~~g~I~L~~~~~v~~~~~~~~~~F~i~t~~~r~~~l~a~s~~e~~~Wi~al~ 139 (160)
....-++++++..|.++..... ... .-.|++..+..++....--...+.|.+. +..+.+..-+..+.+.=++.|+
T Consensus 20 ~~~~g~l~~TnkRlif~~~~~~~~~~---~~~i~y~~I~~v~~~~g~~~~~i~i~~~-~~~~~i~~i~k~~~~~~~~~i~ 95 (96)
T PF14470_consen 20 TSFPGVLVLTNKRLIFYSKGMFGGKK---FESIPYDDITSVSFKKGILGGKITIETN-GEKIKIDNIQKGDVKEFYEYIK 95 (96)
T ss_pred cCceeEEEEeCCEEEEEEcccCCCce---EEEEEhhheEEEEEEccccccEEEEEEC-CEEEEEEEcCHHHHHHHHHHHh
Confidence 4556678999999999876422 222 5779999998887764323456888885 5788888778888888777775
Q ss_pred H
Q psy8929 140 R 140 (160)
Q Consensus 140 ~ 140 (160)
+
T Consensus 96 ~ 96 (96)
T PF14470_consen 96 E 96 (96)
T ss_pred C
Confidence 3
No 167
>PF15406 PH_6: Pleckstrin homology domain
Probab=49.59 E-value=20 Score=23.95 Aligned_cols=32 Identities=16% Similarity=0.439 Sum_probs=21.7
Q ss_pred EeCCeEEEeeCCCcccCCcccceeecccceeecc
Q psy8929 15 LRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSE 48 (160)
Q Consensus 15 l~~~~L~yy~~~~~~~~~~l~g~i~l~~~~~~~~ 48 (160)
=++..|.+|.. .+.++ .+.|.|+|..+..+..
T Consensus 46 qTGKGLLF~~K-~~dka-~P~GiinLadase~~~ 77 (112)
T PF15406_consen 46 QTGKGLLFFSK-AEDKA-SPSGIINLADASEPEK 77 (112)
T ss_pred ccCceEEEEec-ccccc-CCcceEehhhcccccc
Confidence 35788899886 23333 3469999998776553
No 168
>KOG0689|consensus
Probab=47.44 E-value=27 Score=29.26 Aligned_cols=51 Identities=22% Similarity=0.248 Sum_probs=34.7
Q ss_pred EEcCCceeeeecCCCCCceEEEEeCCC---cEEEEEcCCHHHHHHHHHHHHHHhc
Q psy8929 92 VALNNVTSLSEVPVARNFGFQITTWDS---KRTILSAVTAGIRNNWMSAIKRTAA 143 (160)
Q Consensus 92 I~L~~~~~v~~~~~~~~~~F~i~t~~~---r~~~l~a~s~~e~~~Wi~al~~~~~ 143 (160)
|.+.... .++...+.+..|.|..... .+|.++|.+.++...|+.+|-...-
T Consensus 308 ik~~~lg-le~n~~~s~~rF~i~~r~~~~~~~~vlqa~s~~~k~~W~~~i~~~l~ 361 (448)
T KOG0689|consen 308 IKVNDLG-LEENNDNSASRFEIWFRGRKKREAYVLQAGSKEIKYAWTRAISSLLW 361 (448)
T ss_pred hhhhhee-eeccCCCCCcchhhhhhcccccceeEEeeCCHHHHHHHHHHHHHHHH
Confidence 3344333 3443345667888875432 2799999999999999999876443
No 169
>KOG4095|consensus
Probab=45.67 E-value=14 Score=26.14 Aligned_cols=20 Identities=30% Similarity=0.818 Sum_probs=18.5
Q ss_pred eeeceEEEEEEeCCEEEEEe
Q psy8929 59 ITTWTKHWFVLRGCSLLYYR 78 (160)
Q Consensus 59 ~~~WkkrwfvL~~~~L~yyk 78 (160)
...|-++|+.+.+..|.+||
T Consensus 28 VRrWEKKwVtvgDTslRIyK 47 (165)
T KOG4095|consen 28 VRRWEKKWVTVGDTSLRIYK 47 (165)
T ss_pred HHHHhhheEeecccceEEEE
Confidence 46799999999999999999
No 170
>COG4687 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=44.91 E-value=95 Score=20.91 Aligned_cols=65 Identities=11% Similarity=0.113 Sum_probs=42.2
Q ss_pred EEeCCEEEEEeCCCCccCCccceeEEcCCceeeeecCC--CCCceEEEEeCCCcEEEEEcCCHHHHHHHHH
Q psy8929 68 VLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPV--ARNFGFQITTWDSKRTILSAVTAGIRNNWMS 136 (160)
Q Consensus 68 vL~~~~L~yyk~~~~~~~~~~~g~I~L~~~~~v~~~~~--~~~~~F~i~t~~~r~~~l~a~s~~e~~~Wi~ 136 (160)
.|-+..+.+|.+...+.- -.|+-+.+..+...-. .-...|.|.|..+-+|.|...+....-.|+.
T Consensus 28 liGDkgfEFYn~~nv~k~----iqipWs~i~~v~vsvs~KK~~~~f~i~td~~gk~~FaSkdsg~iLk~ir 94 (122)
T COG4687 28 LIGDKGFEFYNDRNVEKF----IQIPWSEINEVDVSVSLKKWGRQFSIFTDTQGKVRFASKDSGKILKKIR 94 (122)
T ss_pred EEcccceeecCCCChhhe----eEecHHHhheeheeehhhhhcceEEEEEcCCceEEEEeCCchhHHHHHH
Confidence 455677888988776442 3444444432222111 2346799999866799999999988887765
No 171
>PF02831 gpW: gpW; InterPro: IPR004174 GpW is a 68 residue protein known to be present in phage particles. Extracts of phage-infected cells lacking GpW contain DNA-filled heads, and active tails, but no infectious virions. GpW is required for the addition of GpFII to the head, which is, in turn, required for the attachment of tails. Since GpFII and tails are known to be attached at the connector, GpW is also likely to assemble at this site. The addition of GpW to filled heads increases the DNase resistance of the packaged DNA, suggesting that GpW either forms a plug at the connector to prevent ejection of the DNA, or binds directly to the DNA. The large number of positively charged residues in GpW (its calculated pI is 10.8) is consistent with a role in DNA interaction [].; GO: 0019067 viral assembly, maturation, egress, and release; PDB: 2L6Q_A 2L6R_A 1HYW_A.
Probab=43.30 E-value=62 Score=19.68 Aligned_cols=32 Identities=6% Similarity=0.118 Sum_probs=27.2
Q ss_pred eCCCcEEEEEcCCHHHHHHHHHHHHHHhcccC
Q psy8929 115 TWDSKRTILSAVTAGIRNNWMSAIKRTAAMSL 146 (160)
Q Consensus 115 t~~~r~~~l~a~s~~e~~~Wi~al~~~~~~~~ 146 (160)
..+++...+...+..+...+|..|+..+....
T Consensus 27 ~~dgrsV~Yt~a~i~~L~~yI~~L~~~Lg~~~ 58 (68)
T PF02831_consen 27 QGDGRSVTYTQANIGDLRAYIQQLEAQLGIVG 58 (68)
T ss_dssp EETTEEEEEEGGGHHHHHHHHHHHHHHTTST-
T ss_pred ecCCeEEEEecCCHHHHHHHHHHHHHHhCcCC
Confidence 33569999999999999999999999987553
No 172
>KOG4471|consensus
Probab=41.87 E-value=1e+02 Score=27.09 Aligned_cols=55 Identities=18% Similarity=0.220 Sum_probs=40.8
Q ss_pred ceeEEcCCceeeeecCC----CCCceEEEEeCCCcEEEEEcCCHHHHH-HHHHHHHHHhc
Q psy8929 89 DGVVALNNVTSLSEVPV----ARNFGFQITTWDSKRTILSAVTAGIRN-NWMSAIKRTAA 143 (160)
Q Consensus 89 ~g~I~L~~~~~v~~~~~----~~~~~F~i~t~~~r~~~l~a~s~~e~~-~Wi~al~~~~~ 143 (160)
.+.|+|.-+..|+.... ...+.++|..+|.|...+.-.+++... .|+..|..++.
T Consensus 78 ~~~VPLg~Ie~vek~~~~~~g~ns~~L~i~CKDmr~lR~~fk~~~q~r~~~~e~L~~~~~ 137 (717)
T KOG4471|consen 78 VLDVPLGVIERVEKRGGATSGENSFGLEITCKDMRNLRCAFKQEEQCRRDWFERLNRAAF 137 (717)
T ss_pred eEeechhhhhhhhhcCccccCCcceeEEEEeccccceeeecCcccccHHHHHHHHHHhcC
Confidence 67777777766665432 234667777888888888888877766 99999999876
No 173
>KOG3549|consensus
Probab=41.00 E-value=39 Score=27.54 Aligned_cols=38 Identities=21% Similarity=0.389 Sum_probs=30.9
Q ss_pred CCCceEEEEeCCC-cEEEEEcCCHHHHHHHHHHHHHHhc
Q psy8929 106 ARNFGFQITTWDS-KRTILSAVTAGIRNNWMSAIKRTAA 143 (160)
Q Consensus 106 ~~~~~F~i~t~~~-r~~~l~a~s~~e~~~Wi~al~~~~~ 143 (160)
-|.+.|++..-+| .+=.+.+++.++..+|+.||...|.
T Consensus 223 lRqNAFeV~aldGvstGii~c~~a~d~~dWL~ait~Ni~ 261 (505)
T KOG3549|consen 223 LRQNAFEVRALDGVSTGIIHCDEAADLSDWLKAITDNIV 261 (505)
T ss_pred hhhccceEEeecccccceeEEhhhhHHHHHHHHHHHHHH
Confidence 3678999987655 3568899999999999999987664
No 174
>PF06115 DUF956: Domain of unknown function (DUF956); InterPro: IPR010360 This is a family of bacterial sequences with undetermined function.
Probab=40.60 E-value=1.2e+02 Score=20.66 Aligned_cols=68 Identities=13% Similarity=0.132 Sum_probs=43.8
Q ss_pred EeCCEEEEEeCCCCccCCccceeEEcCCceeeeecC---CCCCceEEEEeCCCcEEEEEcCCHHHHHHHHHHHHHHhc
Q psy8929 69 LRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVP---VARNFGFQITTWDSKRTILSAVTAGIRNNWMSAIKRTAA 143 (160)
Q Consensus 69 L~~~~L~yyk~~~~~~~~~~~g~I~L~~~~~v~~~~---~~~~~~F~i~t~~~r~~~l~a~s~~e~~~Wi~al~~~~~ 143 (160)
+-+..+.||.+...+.- -.|+-..+..|...- ...-..|.|.|..+-+|.|++.+.... +.++++.+.
T Consensus 29 iGDkaFEFyn~~n~~dy----IQIPW~eI~~V~a~V~fkgk~I~RF~I~Tk~~G~f~Fsskd~k~~---Lk~~r~yv~ 99 (118)
T PF06115_consen 29 IGDKAFEFYNDRNVEDY----IQIPWEEIDYVIASVSFKGKWIPRFAIFTKKNGKFTFSSKDSKKV---LKAIRKYVG 99 (118)
T ss_pred EcccceEeecCCChhhc----EEeChhheeEEEEEEEECCCEEeeEEEEECCCCEEEEEECChHHH---HHHHHHhcC
Confidence 44567888887665443 446666666544321 133456999998767999999888655 455555554
No 175
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=39.85 E-value=55 Score=27.24 Aligned_cols=20 Identities=20% Similarity=0.409 Sum_probs=15.1
Q ss_pred CCCceEEEEEEeCCeEEEee
Q psy8929 5 KHTWTKHWFVLRGCSLLYYR 24 (160)
Q Consensus 5 ~~~Wkkrwfvl~~~~L~yy~ 24 (160)
...|++|||.++++.+....
T Consensus 389 ~~~wk~ry~~l~~~~l~~~~ 408 (478)
T PTZ00267 389 DMRWKKRYFYIGNGQLRISL 408 (478)
T ss_pred CcchhhheEEecCCceEEEe
Confidence 34699999999976665543
No 176
>KOG0169|consensus
Probab=36.73 E-value=34 Score=30.47 Aligned_cols=84 Identities=14% Similarity=0.140 Sum_probs=50.6
Q ss_pred ece-EEEEEEeCCEEEEEeCCCCccCCccceeEEcCCceeeeecCC-----------CCCceEEEEeCCC-cEEEEEcCC
Q psy8929 61 TWT-KHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPV-----------ARNFGFQITTWDS-KRTILSAVT 127 (160)
Q Consensus 61 ~Wk-krwfvL~~~~L~yyk~~~~~~~~~~~g~I~L~~~~~v~~~~~-----------~~~~~F~i~t~~~-r~~~l~a~s 127 (160)
.|+ .|+|.|....+..+-......+.. .. +.+..+..|..... ....+|.|++.+. ...-|.|.+
T Consensus 30 ~~~~~r~~~l~~d~~~~r~~~~~~~~~~-~~-~~i~~i~~vr~g~~t~~lr~~~~~~~~~~~fsi~~~~~~e~ldl~a~s 107 (746)
T KOG0169|consen 30 SRKFNRLFKLDNDGSTVRWSRTNRDPNK-AK-VSISEIEEVRSGKQTENLRSLARDLPEDRCFSIIFKDRYESLDLIANS 107 (746)
T ss_pred chhHHhhhhhhhccceEEeccccCCchh-cc-cchhhhHHHhccccchhhHHHHHhcCcceeEEEEeccccccccccCCC
Confidence 343 466666554333333233322221 22 66655554433211 3457899998542 366789999
Q ss_pred HHHHHHHHHHHHHHhcccC
Q psy8929 128 AGIRNNWMSAIKRTAAMSL 146 (160)
Q Consensus 128 ~~e~~~Wi~al~~~~~~~~ 146 (160)
.++++.|+.-|+..+....
T Consensus 108 ~~~a~~wV~gl~~l~s~~~ 126 (746)
T KOG0169|consen 108 KEDANIWVSGLRKLISRSK 126 (746)
T ss_pred HHHHHHHhhhHHHHHhccc
Confidence 9999999999999887554
No 177
>KOG1264|consensus
Probab=36.40 E-value=41 Score=30.64 Aligned_cols=54 Identities=20% Similarity=0.301 Sum_probs=40.0
Q ss_pred ceeEEcCCceeeeecCC-------------CCCceEEEEeCCC---cEEEEEcCCHHHHHHHHHHHHHHh
Q psy8929 89 DGVVALNNVTSLSEVPV-------------ARNFGFQITTWDS---KRTILSAVTAGIRNNWMSAIKRTA 142 (160)
Q Consensus 89 ~g~I~L~~~~~v~~~~~-------------~~~~~F~i~t~~~---r~~~l~a~s~~e~~~Wi~al~~~~ 142 (160)
.|.|+|..+..+.+... ...+||.|..+.. +++-+.|.++.|.+.|+.-|+-..
T Consensus 61 egai~i~eikeirpgk~skdfdry~~~fr~k~s~cfvil~gt~f~lktls~vatse~e~n~w~~glkw~~ 130 (1267)
T KOG1264|consen 61 EGAIDIREIKEIRPGKNSKDFDRYKRAFRQKESCCFVILYGTQFVLKTLSLVATSEEEANNWLSGLKWLH 130 (1267)
T ss_pred cceeeeeeeeeccCCccchhHHHHHHHhccccceeEEEeeCcEEEeeeeehhhhhhHHHHHHhhcchhhh
Confidence 48888888776665322 2357898886542 688899999999999999887643
No 178
>PF15404 PH_4: Pleckstrin homology domain
Probab=36.15 E-value=65 Score=23.65 Aligned_cols=41 Identities=20% Similarity=0.178 Sum_probs=29.0
Q ss_pred eeeceEEEEEEeCCEEEEEeCCCCccCC--------ccceeEEcCCcee
Q psy8929 59 ITTWTKHWFVLRGCSLLYYRDPKAEESG--------VLDGVVALNNVTS 99 (160)
Q Consensus 59 ~~~WkkrwfvL~~~~L~yyk~~~~~~~~--------~~~g~I~L~~~~~ 99 (160)
...++++++||.+|.|..|..-.....| ...-+|+|.+|-.
T Consensus 12 hs~F~~~~vvL~~G~Li~f~~~~Rs~tG~~~~~~~~~~~~tI~L~dcYv 60 (185)
T PF15404_consen 12 HSTFKKYFVVLIPGFLILFQLFKRSRTGFAKPTVHYEHYLTIPLRDCYV 60 (185)
T ss_pred CCCceEEEEEEeCCEEEEEEEEeeccCCcccceEEeEeeeeeccCCceE
Confidence 3578999999999999999874322111 1236788888874
No 179
>PF06713 bPH_4: Bacterial PH domain; InterPro: IPR009589 This entry is represented by Bacteriophage SP-beta, YolF. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This family consists of several hypothetical proteins specific to Oceanobacillus and Bacillus species. Members of this family are typically around 130 residues in length. The function of this family is unknown.
Probab=34.41 E-value=1.1e+02 Score=18.56 Aligned_cols=62 Identities=8% Similarity=0.022 Sum_probs=41.0
Q ss_pred EEEeCCEEEEEeCCCCccCCccceeEEcCCceeeeecCC------CCCceEEEEeCCCcEEEEEcCCHHHHHHHH
Q psy8929 67 FVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPV------ARNFGFQITTWDSKRTILSAVTAGIRNNWM 135 (160)
Q Consensus 67 fvL~~~~L~yyk~~~~~~~~~~~g~I~L~~~~~v~~~~~------~~~~~F~i~t~~~r~~~l~a~s~~e~~~Wi 135 (160)
+++.++.|.+.-.. ....|++..+..|.+... .....+.|.........++.+++++.-+-+
T Consensus 3 Y~i~~~~L~I~~G~-------~~~~I~i~~I~~I~~~~~~~~~~a~S~~rl~I~y~~~~~i~IsP~~~~~FI~~L 70 (74)
T PF06713_consen 3 YIIEDDYLIIKCGF-------FKKKIPIEDIRSIRPTKNPLSSPALSLDRLEIYYGKYKSILISPKDKEEFIAEL 70 (74)
T ss_pred EEEeCCEEEEEECC-------cccEEEhHHccEEEecCCccccccccccEEEEEECCCCEEEEECCCHHHHHHHH
Confidence 35578888775541 246699999998887643 233578888865567777777666655443
No 180
>KOG3518|consensus
Probab=34.03 E-value=43 Score=27.13 Aligned_cols=39 Identities=21% Similarity=0.353 Sum_probs=30.7
Q ss_pred CCCCceEEEEeCCC--cEEEEEcCCHHHHHHHHHHHHHHhc
Q psy8929 105 VARNFGFQITTWDS--KRTILSAVTAGIRNNWMSAIKRTAA 143 (160)
Q Consensus 105 ~~~~~~F~i~t~~~--r~~~l~a~s~~e~~~Wi~al~~~~~ 143 (160)
+..|..|++.+-++ -.+.|.|.+.++..-||..|+..|-
T Consensus 393 peeplsfqv~~fdnpkaq~~fma~sme~kr~wm~elkrlil 433 (521)
T KOG3518|consen 393 PEEPLSFQVFHFDNPKAQHTFMAKSMEDKRLWMLELKRLIL 433 (521)
T ss_pred CCCCceeEEEecCCcchhhhhhhhhhHHHHHHHHHHHHHHH
Confidence 34678888875332 4789999999999999999988654
No 181
>PF12480 DUF3699: Protein of unknown function (DUF3699) ; InterPro: IPR022168 This domain family is found in eukaryotes, and is approximately 80 amino acids in length.
Probab=33.58 E-value=1.2e+02 Score=18.80 Aligned_cols=32 Identities=6% Similarity=0.220 Sum_probs=23.6
Q ss_pred CceEEEEeCCCcEEEEEcCC-----HHHHHHHHHHHH
Q psy8929 108 NFGFQITTWDSKRTILSAVT-----AGIRNNWMSAIK 139 (160)
Q Consensus 108 ~~~F~i~t~~~r~~~l~a~s-----~~e~~~Wi~al~ 139 (160)
+-.+.+....+|.||+...+ +.....|+.-|.
T Consensus 26 ~~~l~lk~~t~r~~yl~L~~~~~~~~~~F~~w~~lv~ 62 (77)
T PF12480_consen 26 KQQLKLKLVTGRPFYLQLCAPADKPETLFGEWIRLVS 62 (77)
T ss_pred ccEEEEEEccCCEEEEEEeCcccCcchhHHHHHHHHH
Confidence 34555555557999988555 678899999887
No 182
>KOG0521|consensus
Probab=32.83 E-value=20 Score=32.28 Aligned_cols=38 Identities=21% Similarity=0.446 Sum_probs=28.4
Q ss_pred CCCceEEEEEEeCCeEEEeeCCCcccCCcccceeeccccee
Q psy8929 5 KHTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTS 45 (160)
Q Consensus 5 ~~~Wkkrwfvl~~~~L~yy~~~~~~~~~~l~g~i~l~~~~~ 45 (160)
.+.|+||||-..++.|.|+..-..... -..+||..|..
T Consensus 288 ~~tw~r~~f~~q~~~l~~~~r~~~~~~---~~~~dL~~csv 325 (785)
T KOG0521|consen 288 SKTWKRRWFSIQDGQLGYQHRGADAEN---VLIEDLRTCSV 325 (785)
T ss_pred hhhHHhhhhhhhccccccccccccccc---cccccchhccc
Confidence 578999999999999999877655443 24557776654
No 183
>PLN02958 diacylglycerol kinase/D-erythro-sphingosine kinase
Probab=31.75 E-value=63 Score=27.33 Aligned_cols=25 Identities=12% Similarity=0.316 Sum_probs=22.9
Q ss_pred cEEEEEcCCHHHHHHHHHHHHHHhc
Q psy8929 119 KRTILSAVTAGIRNNWMSAIKRTAA 143 (160)
Q Consensus 119 r~~~l~a~s~~e~~~Wi~al~~~~~ 143 (160)
+.|.|.+.+.++.+.|+++|+..++
T Consensus 82 ~~~~~~~~~~~~~~~w~~~~~~~~~ 106 (481)
T PLN02958 82 KDFVFEPLSDESRRLWCQKLRDYLD 106 (481)
T ss_pred eeEEEeCCCHHHHHHHHHHHHHHHh
Confidence 5899999999999999999999775
No 184
>KOG0931|consensus
Probab=27.70 E-value=1.3e+02 Score=25.62 Aligned_cols=36 Identities=17% Similarity=0.221 Sum_probs=29.5
Q ss_pred CceEEEEeCCC-----cEEEEEcCCHHHHHHHHHHHHHHhc
Q psy8929 108 NFGFQITTWDS-----KRTILSAVTAGIRNNWMSAIKRTAA 143 (160)
Q Consensus 108 ~~~F~i~t~~~-----r~~~l~a~s~~e~~~Wi~al~~~~~ 143 (160)
.|++.|+++.. ...+|+|.+.+|+...+..|++.|.
T Consensus 486 ~fGitltsp~~g~e~k~~ihFnA~n~~dr~kFv~Dl~ESIa 526 (627)
T KOG0931|consen 486 EFGITLTSPVPGSEKKVLIHFNAPNFQDRCKFVADLRESIA 526 (627)
T ss_pred cCceEEeccCCCCceeEEEEecCCCHHHHHHHHHHHHHHHH
Confidence 46677776542 2789999999999999999999876
No 185
>KOG3503|consensus
Probab=27.32 E-value=60 Score=19.07 Aligned_cols=12 Identities=25% Similarity=0.611 Sum_probs=8.9
Q ss_pred eEEEeeCCCccc
Q psy8929 19 SLLYYRDPKAEE 30 (160)
Q Consensus 19 ~L~yy~~~~~~~ 30 (160)
.|+||-+++...
T Consensus 2 ~L~y~lne~g~r 13 (64)
T KOG3503|consen 2 FLMYYLNENGKR 13 (64)
T ss_pred eeEEEECCCCcE
Confidence 488998887644
No 186
>PHA03001 putative virion core protein; Provisional
Probab=26.74 E-value=68 Score=22.10 Aligned_cols=18 Identities=17% Similarity=0.591 Sum_probs=15.3
Q ss_pred EEEEEeCCeEEEeeCCCc
Q psy8929 11 HWFVLRGCSLLYYRDPKA 28 (160)
Q Consensus 11 rwfvl~~~~L~yy~~~~~ 28 (160)
-+.|+||+.|+||+=++.
T Consensus 54 Fylvvrd~diFyfkcdkG 71 (132)
T PHA03001 54 FYLVVKDKDIFYFKCDKG 71 (132)
T ss_pred EEEEEecCcEEEEEecCC
Confidence 478999999999997754
No 187
>KOG4305|consensus
Probab=26.65 E-value=57 Score=30.33 Aligned_cols=27 Identities=22% Similarity=0.340 Sum_probs=24.3
Q ss_pred CCcEEEEEcCCHHHHHHHHHHHHHHhc
Q psy8929 117 DSKRTILSAVTAGIRNNWMSAIKRTAA 143 (160)
Q Consensus 117 ~~r~~~l~a~s~~e~~~Wi~al~~~~~ 143 (160)
-+..|.|.+++..+++.|++.|.++..
T Consensus 661 ~~~~ftly~~s~~~r~~w~ekI~~aq~ 687 (1029)
T KOG4305|consen 661 RGASFTLYAESLNGRDQWVEKIKQAQK 687 (1029)
T ss_pred cceEEEeeccchHHhhhHHhhhhHHHH
Confidence 357999999999999999999999766
No 188
>COG4026 Uncharacterized protein containing TOPRIM domain, potential nuclease [General function prediction only]
Probab=26.14 E-value=1.6e+02 Score=22.50 Aligned_cols=24 Identities=13% Similarity=0.048 Sum_probs=22.0
Q ss_pred EEEEEcCCHHHHHHHHHHHHHHhc
Q psy8929 120 RTILSAVTAGIRNNWMSAIKRTAA 143 (160)
Q Consensus 120 ~~~l~a~s~~e~~~Wi~al~~~~~ 143 (160)
+-++.|++.+++-.|+..|+.++.
T Consensus 250 ~~~iaapsREdave~l~iik~a~~ 273 (290)
T COG4026 250 TVYIAAPSREDAVEELEIIKEAIE 273 (290)
T ss_pred eeeeecCchHHHHHHHHHHHHHHH
Confidence 568999999999999999999866
No 189
>cd06409 PB1_MUG70 The MUG70 protein is a product of the meiotically up-regulated gene 70 which has a role in meiosis and harbors a PB1 domain. The PB1 domain is a modular domain mediating specific protein-protein interactions which play a role in many critical cell processes such as osteoclastogenesis, angiogenesis, early cardiovascular development, and cell polarity. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domains depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic amino acid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as noncanonical PB1-interactions. The PB1 domain module is
Probab=25.65 E-value=1.7e+02 Score=18.63 Aligned_cols=37 Identities=8% Similarity=0.073 Sum_probs=27.2
Q ss_pred ceEEEEeCCCcEEEEEcCCHHHHHHHHHHHHHHhccc
Q psy8929 109 FGFQITTWDSKRTILSAVTAGIRNNWMSAIKRTAAMS 145 (160)
Q Consensus 109 ~~F~i~t~~~r~~~l~a~s~~e~~~Wi~al~~~~~~~ 145 (160)
|.|.+.++.||+.-|.+...+-..+=+..|.+-++..
T Consensus 1 f~FK~~~~~GrvhRf~~~~s~~~~~L~~~I~~Rl~~d 37 (86)
T cd06409 1 FAFKFKDPKGRVHRFRLRPSESLEELRTLISQRLGDD 37 (86)
T ss_pred CcEEeeCCCCCEEEEEecCCCCHHHHHHHHHHHhCCc
Confidence 4688888889999999886666666666666655433
No 190
>PF14506 CppA_N: CppA N-terminal; PDB: 3E0R_D.
Probab=25.59 E-value=1e+02 Score=21.12 Aligned_cols=23 Identities=17% Similarity=0.338 Sum_probs=14.9
Q ss_pred CCCceEEEEeCCCcEEEEEcCCH
Q psy8929 106 ARNFGFQITTWDSKRTILSAVTA 128 (160)
Q Consensus 106 ~~~~~F~i~t~~~r~~~l~a~s~ 128 (160)
.+.+.|++++|++-.|.+.|++.
T Consensus 94 ~~gyAfe~vSPEgd~~llhaEdd 116 (125)
T PF14506_consen 94 KNGYAFEAVSPEGDRFLLHAEDD 116 (125)
T ss_dssp SSSEEEEEE-TT--EEEEE--S-
T ss_pred CCceEEEEECCCCCEEEEEEcCC
Confidence 46799999999999999999864
No 191
>cd05134 RasGAP_RASA3 RASA3 (or GAP1_IP4BP) is a member of the GAP1 family and has been shown to specifically bind 1,3,4,5-tetrakisphosphate (IP4). Thus, RASA3 may function as an IP4 receptor. The members of GAP1 family are characterized by a conserved domain structure comprising N-terminal tandem C2 domains, a highly conserved central RasGAP domain, and a C-terminal pleckstrin-homology domain that is associated with a Bruton's tyrosine kinase motif. Purified RASA3 stimulates GAP activity on Ras with about a five-fold lower potency than p120RasGAP, but shows no GAP-stimulating activity at all against Rac or Rab3A.
Probab=24.77 E-value=32 Score=27.41 Aligned_cols=14 Identities=29% Similarity=0.786 Sum_probs=11.2
Q ss_pred eeeeceEEEEEEeC
Q psy8929 58 QITTWTKHWFVLRG 71 (160)
Q Consensus 58 ~~~~WkkrwfvL~~ 71 (160)
..+++|+|||+|+.
T Consensus 297 ~~~~~k~r~~~lt~ 310 (310)
T cd05134 297 GMKNFKKRWFRLTN 310 (310)
T ss_pred cccchhheeeecCC
Confidence 45689999999863
No 192
>PF06138 Chordopox_E11: Chordopoxvirus E11 protein; InterPro: IPR009201 This group represents a virion core protein, vaccinia E11L type.
Probab=22.94 E-value=87 Score=21.54 Aligned_cols=18 Identities=22% Similarity=0.628 Sum_probs=15.3
Q ss_pred EEEEEeCCeEEEeeCCCc
Q psy8929 11 HWFVLRGCSLLYYRDPKA 28 (160)
Q Consensus 11 rwfvl~~~~L~yy~~~~~ 28 (160)
-+.|+||..++||+=++.
T Consensus 55 Fylvvrd~diFyfk~dkG 72 (130)
T PF06138_consen 55 FYLVVRDKDIFYFKCDKG 72 (130)
T ss_pred EEEEEecCcEEEEEecCC
Confidence 478999999999997754
No 193
>PHA02819 hypothetical protein; Provisional
Probab=22.50 E-value=1.5e+02 Score=18.15 Aligned_cols=22 Identities=14% Similarity=0.185 Sum_probs=18.6
Q ss_pred EEcCCHHHHHHHHHHHHHHhcc
Q psy8929 123 LSAVTAGIRNNWMSAIKRTAAM 144 (160)
Q Consensus 123 l~a~s~~e~~~Wi~al~~~~~~ 144 (160)
|-..+.+|.++-|+.++.++..
T Consensus 12 FmsS~DdDFnnFI~VVksVLtd 33 (71)
T PHA02819 12 FMSSSDDDFNNFINVVKSVLNN 33 (71)
T ss_pred hhCCchhHHHHHHHHHHHHHcC
Confidence 4567889999999999998765
No 194
>PF08394 Arc_trans_TRASH: Archaeal TRASH domain; InterPro: IPR013603 This region is found in the C terminus of a number of archaeal transcriptional regulators. It is thought to function as a metal-sensing regulatory module [].
Probab=22.22 E-value=88 Score=16.60 Aligned_cols=12 Identities=17% Similarity=0.097 Sum_probs=9.1
Q ss_pred CCcEEEEEcCCH
Q psy8929 117 DSKRTILSAVTA 128 (160)
Q Consensus 117 ~~r~~~l~a~s~ 128 (160)
++++|||++++=
T Consensus 18 ~~~~y~fCC~tC 29 (37)
T PF08394_consen 18 GNKVYYFCCPTC 29 (37)
T ss_pred CCeEEEEECHHH
Confidence 358999998763
No 195
>PF10453 NUFIP1: Nuclear fragile X mental retardation-interacting protein 1 (NUFIP1); InterPro: IPR019496 Nuclear fragile X mental retardation-interacting protein 1 (Nufip1) has been implicated in the assembly of the large subunit of the ribosome [] and in telomere maintenance []. It is known to bind RNA [] and is phosphorylated upon DNA damage []. This entry represents a conserved domain found within Nufip1. Some proteins containing this region also contain a CCCH zinc finger.
Probab=22.09 E-value=1.2e+02 Score=17.57 Aligned_cols=21 Identities=14% Similarity=0.278 Sum_probs=15.8
Q ss_pred CcEEEEEcCCHHHHHHHHHHHHH
Q psy8929 118 SKRTILSAVTAGIRNNWMSAIKR 140 (160)
Q Consensus 118 ~r~~~l~a~s~~e~~~Wi~al~~ 140 (160)
|+.+.| +|++|...|+..=++
T Consensus 12 g~~~~L--~t~eeI~~W~eERrk 32 (56)
T PF10453_consen 12 GTSIKL--QTPEEIAKWIEERRK 32 (56)
T ss_pred Cceeec--CCHHHHHHHHHHHHH
Confidence 455555 699999999987655
No 196
>PF12213 Dpoe2NT: DNA polymerases epsilon N terminal; InterPro: IPR024639 This domain is found in the N-terminal of DNA polymerase epsilon subunit B proteins. It contains a single completely conserved phenylalanine residue that may be functionally important. It forms a primarily alpha helical structure in which four helices are arranged in two hairpins with connecting loops containing beta strands which form a short parallel sheet. DNA polymerase epsilon is required in DNA replication for synthesis of the leading strand. The N-terminal domain has close structural relation to AAA+ protein C-terminal domains [].; PDB: 2V6Z_M.
Probab=21.95 E-value=77 Score=19.46 Aligned_cols=19 Identities=16% Similarity=0.447 Sum_probs=15.1
Q ss_pred CCHHHHHHHHHHHHHHhcc
Q psy8929 126 VTAGIRNNWMSAIKRTAAM 144 (160)
Q Consensus 126 ~s~~e~~~Wi~al~~~~~~ 144 (160)
-++.|+++||+.|-.++..
T Consensus 35 ~~~~e~e~~l~~Ii~~v~k 53 (73)
T PF12213_consen 35 LSEEEREDWLDKIIDAVQK 53 (73)
T ss_dssp S-TTTHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHHHhc
Confidence 3567899999999998863
No 197
>cd05128 RasGAP_GAP1_like The GAP1 family of Ras GTPase-activating proteins includes GAP1(m) (or RASA2), GAP1_IP4BP (or RASA3), Ca2+ -promoted Ras inactivator (CAPRI, or RASAL4), and Ras GTPase activating-like proteins (RASAL) or RASAL1. The members are characterized by a conserved domain structure comprising N-terminal tandem C2 domains, a highly conserved central RasGAP domain, and a C-terminal pleckstrin homology domain that is associated with a Bruton's tyrosine kinase motif. While this domain structure is conserved, a small change in the function of each individual domain and the interaction between domains has a marked effect on the regulation of each protein.
Probab=21.49 E-value=34 Score=27.27 Aligned_cols=14 Identities=21% Similarity=0.467 Sum_probs=11.5
Q ss_pred eeeeeceEEEEEEe
Q psy8929 57 FQITTWTKHWFVLR 70 (160)
Q Consensus 57 ~~~~~WkkrwfvL~ 70 (160)
...+++|+|||.|+
T Consensus 302 ~~~~~~k~r~~~lt 315 (315)
T cd05128 302 LGRKNFKKRYFRLT 315 (315)
T ss_pred ccccchhheeeecC
Confidence 35678999999985
No 198
>KOG3521|consensus
Probab=21.24 E-value=1.3e+02 Score=26.83 Aligned_cols=37 Identities=8% Similarity=0.107 Sum_probs=29.9
Q ss_pred CCceEEEEeCC-----CcEEEEEcCCHHHHHHHHHHHHHHhc
Q psy8929 107 RNFGFQITTWD-----SKRTILSAVTAGIRNNWMSAIKRTAA 143 (160)
Q Consensus 107 ~~~~F~i~t~~-----~r~~~l~a~s~~e~~~Wi~al~~~~~ 143 (160)
.++.|-++.-+ ...|.++|..+++...|+++|..|..
T Consensus 486 dpnsf~lVhLtEFh~a~~ayt~hcs~p~d~~~W~D~l~~Aq~ 527 (846)
T KOG3521|consen 486 DPNSFLLVHLTEFHTAQAAYTMHCSGPEDTLRWTDMLKMAQD 527 (846)
T ss_pred CCCceEEEeechhhhhhhhheeecCChhhHHHHHHHHHHHHH
Confidence 46788777432 14789999999999999999999876
No 199
>KOG2677|consensus
Probab=20.63 E-value=91 Score=27.65 Aligned_cols=82 Identities=16% Similarity=0.138 Sum_probs=54.7
Q ss_pred eeeceEEEEEEeC-CEEEEEeCCCCccCCccceeEEcCCceeeeecC-----C-CCCceEEEE---eCCCc---------
Q psy8929 59 ITTWTKHWFVLRG-CSLLYYRDPKAEESGVLDGVVALNNVTSLSEVP-----V-ARNFGFQIT---TWDSK--------- 119 (160)
Q Consensus 59 ~~~WkkrwfvL~~-~~L~yyk~~~~~~~~~~~g~I~L~~~~~v~~~~-----~-~~~~~F~i~---t~~~r--------- 119 (160)
.+.|...|+-|.+ |.|+.|-+++.+.+ ...|.|.-|..+++.. . ++-+...|. ..+.+
T Consensus 465 sR~WgPifvkl~~~g~LqlYyeqglekP---f~E~~L~~~~~lSep~lqnydv~GkIHtvki~~V~YkEK~ky~pk~~v~ 541 (922)
T KOG2677|consen 465 SRHWGPIFVKLTDTGYLQLYYEQGLEKP---FREFKLEICHELSEPRLQNYDVNGKIHTVKIDRVTYKEKKKYQPKPAVA 541 (922)
T ss_pred hccccceEEEEcCCceEEEeecccccch---HHHHhhhhhhccCchhhhccccccceeEEEEEEEEeehhcccCCCCccc
Confidence 4789999999988 59998888888776 6777777776655421 1 455655553 11111
Q ss_pred -------EEEEEcCCHHHHHHHHHHHHHHhc
Q psy8929 120 -------RTILSAVTAGIRNNWMSAIKRTAA 143 (160)
Q Consensus 120 -------~~~l~a~s~~e~~~Wi~al~~~~~ 143 (160)
.+-|...+..+....|.+.+..+.
T Consensus 542 H~a~~eq~lKlGstny~dfl~FittVed~Lm 572 (922)
T KOG2677|consen 542 HTAEREQVLKLGSTNYDDFLSFITTVEDRLM 572 (922)
T ss_pred cchhhhhhhhccCCcHHHHHHHHHHHHHHHh
Confidence 334667777788888887776443
No 200
>cd05394 RasGAP_RASA2 RASA2 (or GAP1(m)) is a member of the GAP1 family of Ras GTPase-activating proteins that includes GAP1_IP4BP (or RASA3), CAPRI, and RASAL. In vitro, RASA2 has been shown to bind inositol 1,3,4,5-tetrakisphosphate (IP4), the water soluble inositol head group of the lipid second messenger phosphatidylinositol 3,4,5-trisphosphate (PIP3). In vivo studies also demonstrated that RASA2 binds PIP3, and it is recruited to the plasma membrane following agonist stimulation of PI 3-kinase. Furthermore, the membrane translocation is a consequence of the ability of its pleckstrin homology (PH) domain to bind PIP3.
Probab=20.46 E-value=36 Score=27.13 Aligned_cols=14 Identities=29% Similarity=0.724 Sum_probs=11.4
Q ss_pred eeeeceEEEEEEeC
Q psy8929 58 QITTWTKHWFVLRG 71 (160)
Q Consensus 58 ~~~~WkkrwfvL~~ 71 (160)
..++||+|||.|+.
T Consensus 300 ~~~~~kkr~~~l~~ 313 (313)
T cd05394 300 GKKNFKKRWFCLTS 313 (313)
T ss_pred ccccchhheeecCC
Confidence 45789999999863
No 201
>PF07831 PYNP_C: Pyrimidine nucleoside phosphorylase C-terminal domain; InterPro: IPR013102 This domain is found at the C-terminal end of the large alpha/beta domain making up various pyrimidine nucleoside phosphorylases [, ]. It has slightly different conformations in different members of this family. For example, in pyrimidine nucleoside phosphorylase (PYNP, P77826 from SWISSPROT) there is an added three-stranded anti-parallel beta sheet as compared to other members of the family, such as Escherichia coli thymidine phosphorylase (TP, P07650 from SWISSPROT) []. The domain contains an alpha/ beta hammerhead fold and residues in this domain seem to be important in formation of the homodimer []. ; GO: 0016763 transferase activity, transferring pentosyl groups, 0006213 pyrimidine nucleoside metabolic process; PDB: 1AZY_A 1OTP_A 2TPT_A 3H5Q_A 1BRW_A 2WK5_C 2J0F_C 2WK6_B 1UOU_A 2DSJ_B ....
Probab=20.44 E-value=1.6e+02 Score=17.98 Aligned_cols=26 Identities=4% Similarity=-0.005 Sum_probs=22.7
Q ss_pred CcEEEEEcCCHHHHHHHHHHHHHHhc
Q psy8929 118 SKRTILSAVTAGIRNNWMSAIKRTAA 143 (160)
Q Consensus 118 ~r~~~l~a~s~~e~~~Wi~al~~~~~ 143 (160)
...+.+.++++...++++..|+.++.
T Consensus 48 d~l~~i~~~~~~~~~~a~~~~~~a~~ 73 (75)
T PF07831_consen 48 DPLATIYANDEARLEEAVERLRAAIT 73 (75)
T ss_dssp SEEEEEEESSSSHHHHHHHHHHHHEE
T ss_pred CeEEEEEcCChHHHHHHHHHHHhCcc
Confidence 36788999999999999999998875
No 202
>cd01229 PH_etc2 Epithelial cell transforming 2 (ECT2) pleckstrin homology (PH) domain. Epithelial cell transforming 2 (ECT2) pleckstrin homology (PH) domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinases, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=20.03 E-value=3e+02 Score=18.82 Aligned_cols=54 Identities=7% Similarity=0.131 Sum_probs=32.0
Q ss_pred ceeEEcCCceeeeecCC--CCCceEEEE--eCC---CcEEEEEcCC-HHHHHHHHHHHHHHh
Q psy8929 89 DGVVALNNVTSLSEVPV--ARNFGFQIT--TWD---SKRTILSAVT-AGIRNNWMSAIKRTA 142 (160)
Q Consensus 89 ~g~I~L~~~~~v~~~~~--~~~~~F~i~--t~~---~r~~~l~a~s-~~e~~~Wi~al~~~~ 142 (160)
...|+|+.+.-|..+.+ .-++.|.++ .+. .+.|.|.-.+ +.+...|+..|-..+
T Consensus 66 i~lmpLs~IkrVvdI~DtE~c~~aF~L~~R~p~d~~~~L~sF~l~~Ee~~K~~~Lk~Lcr~~ 127 (129)
T cd01229 66 IHLMPLSQIKKVLDIRDTEDCHNAFALLVRPPTEQANVLLSFQMTSEELPKEVWLKMLCRHV 127 (129)
T ss_pred EEEeEhHHeEEEEeeeccccccceeEEEEeCCccchheEEEEEecCCcchHHHHHHHHHHHh
Confidence 45677777776665544 224566665 332 2456555433 446788999887654
Done!