RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy8929
(160 letters)
>d1u5ea1 b.55.1.1 (A:14-222) Src-associated adaptor protein Skap2
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 209
Score = 58.0 bits (139), Expect = 1e-11
Identities = 15/89 (16%), Positives = 29/89 (32%), Gaps = 1/89 (1%)
Query: 53 RNFGFQITTWTKHWFVLRGCSLLYYRDPKAEES-GVLDGVVALNNVTSLSEVPVARNFGF 111
++ F W K W L YY K ++ G + + ++ F
Sbjct: 115 KDHSFLGFEWQKRWCALSKTVFYYYGSDKDKQQKGEFAIDGYDVRMNNTLRKDGKKDCCF 174
Query: 112 QITTWDSKRTILSAVTAGIRNNWMSAIKR 140
+I D + +A + W+ +K
Sbjct: 175 EICAPDKRIYQFTAASPKDAEEWVQQLKF 203
Score = 41.9 bits (97), Expect = 8e-06
Identities = 11/67 (16%), Positives = 19/67 (28%), Gaps = 1/67 (1%)
Query: 5 KHTWTKHWFVLRGCSLLYYRDPKAEES-GVLDGVVALNNVTSLSEVPVARNFGFQITTWT 63
W K W L YY K ++ G + + ++ F+I
Sbjct: 121 GFEWQKRWCALSKTVFYYYGSDKDKQQKGEFAIDGYDVRMNNTLRKDGKKDCCFEICAPD 180
Query: 64 KHWFVLR 70
K +
Sbjct: 181 KRIYQFT 187
>d1upqa_ b.55.1.1 (A:) Phosphoinositol 3-phosphate binding
protein-1, PEPP1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 107
Score = 51.8 bits (123), Expect = 4e-10
Identities = 22/82 (26%), Positives = 33/82 (40%)
Query: 61 TWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPVARNFGFQITTWDSKR 120
W + WFVL G L YY+D + E + + N P R F F +
Sbjct: 25 LWKRRWFVLSGHCLFYYKDSREESVLGSVLLPSYNIRPDGPGAPRGRRFTFTAEHPGMRT 84
Query: 121 TILSAVTAGIRNNWMSAIKRTA 142
+L+A T W+ A+ R +
Sbjct: 85 YVLAADTLEDLRGWLRALGRAS 106
Score = 38.4 bits (88), Expect = 5e-05
Identities = 18/71 (25%), Positives = 26/71 (36%)
Query: 3 NKKHTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPVARNFGFQITTW 62
+ W + WFVL G L YY+D + E + + N P R F F
Sbjct: 21 SGLRLWKRRWFVLSGHCLFYYKDSREESVLGSVLLPSYNIRPDGPGAPRGRRFTFTAEHP 80
Query: 63 TKHWFVLRGCS 73
+VL +
Sbjct: 81 GMRTYVLAADT 91
>d1droa_ b.55.1.1 (A:) beta-spectrin {Fruit fly (Drosophila
melanogaster) [TaxId: 7227]}
Length = 122
Score = 49.9 bits (118), Expect = 4e-09
Identities = 11/88 (12%), Positives = 31/88 (35%), Gaps = 6/88 (6%)
Query: 61 TWTKHWFVLRGCSLLYYRDPKAEESGVL------DGVVALNNVTSLSEVPVARNFGFQIT 114
+W K + + + +Y+D K +S N ++ + ++
Sbjct: 31 SWDKVYMAAKAGRISFYKDQKGYKSNPELTFRGEPSYDLQNAAIEIASDYTKKKHVLRVK 90
Query: 115 TWDSKRTILSAVTAGIRNNWMSAIKRTA 142
+ +L A + W++++K +
Sbjct: 91 LANGALFLLQAHDDTEMSQWVTSLKAQS 118
>d1fgya_ b.55.1.1 (A:) Grp1 {Mouse (Mus musculus) [TaxId: 10090]}
Length = 127
Score = 49.1 bits (116), Expect = 7e-09
Identities = 20/106 (18%), Positives = 38/106 (35%), Gaps = 24/106 (22%)
Query: 56 GFQITTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPVARNFGFQITT 115
G ++ TW + WF+L L Y+ +E G++ L N++ + + F++
Sbjct: 15 GGRVKTWKRRWFILTDNCLYYFEYTTDKEP---RGIIPLENLSIREVLDPRKPNCFELYN 71
Query: 116 WDSKRT---------------------ILSAVTAGIRNNWMSAIKR 140
K +SA + + WM +IK
Sbjct: 72 PSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKA 117
>d1eaza_ b.55.1.1 (A:) Tapp1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 103
Score = 47.5 bits (112), Expect = 2e-08
Identities = 17/93 (18%), Positives = 36/93 (38%), Gaps = 8/93 (8%)
Query: 56 GFQITTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPVARNFG----F 111
G + W + +F L ++ Y++ +E V+ L V + E + F
Sbjct: 13 GAVMKNWKRRYFQLDENTIGYFKSELEKE---PLRVIPLKEVHKVQECKQSDIMMRDNLF 69
Query: 112 QITTWDSKRTILSAVTAGIRNNWMSAIKRTAAM 144
+I T S+ + A + ++W+ A+
Sbjct: 70 EIVT-TSRTFYVQADSPEEMHSWIKAVSGAIVA 101
Score = 36.7 bits (84), Expect = 2e-04
Identities = 13/70 (18%), Positives = 28/70 (40%), Gaps = 7/70 (10%)
Query: 3 NKKHTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPVARNFG----FQ 58
W + +F L ++ Y++ +E V+ L V + E + F+
Sbjct: 14 AVMKNWKRRYFQLDENTIGYFKSELEKE---PLRVIPLKEVHKVQECKQSDIMMRDNLFE 70
Query: 59 ITTWTKHWFV 68
I T ++ ++V
Sbjct: 71 IVTTSRTFYV 80
>d1plsa_ b.55.1.1 (A:) Pleckstrin {Human (Homo sapiens) [TaxId:
9606]}
Length = 113
Score = 46.4 bits (109), Expect = 5e-08
Identities = 21/87 (24%), Positives = 31/87 (35%), Gaps = 5/87 (5%)
Query: 56 GFQITTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPVA--RNFGFQI 113
G TW W VL + +Y+ G++ L T S R F F+I
Sbjct: 15 GSVFNTWKPMWVVLLEDGIEFYKKKSDNS---PKGMIPLKGSTLTSPCQDFGKRMFVFKI 71
Query: 114 TTWDSKRTILSAVTAGIRNNWMSAIKR 140
TT + A R+ W+ I +
Sbjct: 72 TTTKQQDHFFQAAFLEERDAWVRDINK 98
Score = 35.7 bits (81), Expect = 5e-04
Identities = 16/73 (21%), Positives = 26/73 (35%), Gaps = 5/73 (6%)
Query: 3 NKKHTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPVA--RNFGFQIT 60
+ +TW W VL + +Y+ G++ L T S R F F+IT
Sbjct: 16 SVFNTWKPMWVVLLEDGIEFYKKKSDNS---PKGMIPLKGSTLTSPCQDFGKRMFVFKIT 72
Query: 61 TWTKHWFVLRGCS 73
T + +
Sbjct: 73 TTKQQDHFFQAAF 85
>d1u5da1 b.55.1.1 (A:108-213) Src kinase-associated phosphoprotein
SKAP55 (SCAP1) {Human (Homo sapiens) [TaxId: 9606]}
Length = 106
Score = 46.0 bits (108), Expect = 7e-08
Identities = 15/90 (16%), Positives = 33/90 (36%), Gaps = 1/90 (1%)
Query: 53 RNFGFQITTWTKHWFVLRGCSLLYYRDPKAEES-GVLDGVVALNNVTSLSEVPVARNFGF 111
++ F + W K W V+ YY + K+++ G + + F
Sbjct: 12 KDHSFFGSEWQKRWCVVSRGLFYYYANEKSKQPKGTFLIKGYSVRMAPHLRRDSKKESCF 71
Query: 112 QITTWDSKRTILSAVTAGIRNNWMSAIKRT 141
++T+ D + +A + +W+ I
Sbjct: 72 ELTSQDRRTYEFTATSPAEARDWVDQISFL 101
Score = 31.0 bits (69), Expect = 0.021
Identities = 6/20 (30%), Positives = 8/20 (40%)
Query: 7 TWTKHWFVLRGCSLLYYRDP 26
W K W V+ YY +
Sbjct: 20 EWQKRWCVVSRGLFYYYANE 39
>d1faoa_ b.55.1.1 (A:) Dual adaptor of phosphotyrosine and
3-phosphoinositides DAPP1/PHISH {Human (Homo sapiens)
[TaxId: 9606]}
Length = 100
Score = 45.9 bits (108), Expect = 8e-08
Identities = 15/85 (17%), Positives = 30/85 (35%), Gaps = 3/85 (3%)
Query: 56 GFQITTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPVARNFGFQITT 115
G + TW WF L L Y++D + E ++ L +++
Sbjct: 14 GGLVKTWKTRWFTLHRNELKYFKDQMSPE---PIRILDLTECSAVQFDYSQERVNCFCLV 70
Query: 116 WDSKRTILSAVTAGIRNNWMSAIKR 140
+ + L A T + W+ ++
Sbjct: 71 FPFRTFYLCAKTGVEADEWIKILRW 95
Score = 32.8 bits (74), Expect = 0.005
Identities = 8/25 (32%), Positives = 10/25 (40%)
Query: 3 NKKHTWTKHWFVLRGCSLLYYRDPK 27
TW WF L L Y++D
Sbjct: 15 GLVKTWKTRWFTLHRNELKYFKDQM 39
>d2elba2 b.55.1.1 (A:274-374) DCC-interacting protein 13-alpha,
APPL1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 101
Score = 44.2 bits (103), Expect = 3e-07
Identities = 14/85 (16%), Positives = 27/85 (31%), Gaps = 3/85 (3%)
Query: 56 GFQITTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPVARNFGFQITT 115
G +TW + ++ +G +L+ +D N + R +
Sbjct: 18 GLVSSTWDRQFYFTQGGNLMSQARGDVAGGLAMD---IDNCSVMAVDCEDRRYCFQITSF 74
Query: 116 WDSKRTILSAVTAGIRNNWMSAIKR 140
K +IL A + W+ I
Sbjct: 75 DGKKSSILQAESKKDHEEWICTINN 99
Score = 30.3 bits (67), Expect = 0.038
Identities = 10/69 (14%), Positives = 21/69 (30%), Gaps = 3/69 (4%)
Query: 5 KHTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPVARNFGFQITTWTK 64
TW + ++ +G +L+ +D N + R + K
Sbjct: 21 SSTWDRQFYFTQGGNLMSQARGDVAGGLAMD---IDNCSVMAVDCEDRRYCFQITSFDGK 77
Query: 65 HWFVLRGCS 73
+L+ S
Sbjct: 78 KSSILQAES 86
>d2i5fa1 b.55.1.1 (A:244-347) Pleckstrin {Human (Homo sapiens)
[TaxId: 9606]}
Length = 104
Score = 44.1 bits (103), Expect = 3e-07
Identities = 19/91 (20%), Positives = 28/91 (30%), Gaps = 7/91 (7%)
Query: 56 GFQITTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPVA------RNF 109
G + W F+LR + + G + L S +
Sbjct: 12 GHRRKNWKVRKFILREDPAYLHYY-DPAGAEDPLGAIHLRGCVVTSVESNSNGRKSEEEN 70
Query: 110 GFQITTWDSKRTILSAVTAGIRNNWMSAIKR 140
F+I T D L A T R W+ AI+
Sbjct: 71 LFEIITADEVHYFLQAATPKERTEWIKAIQM 101
Score = 30.7 bits (68), Expect = 0.029
Identities = 11/77 (14%), Positives = 24/77 (31%), Gaps = 7/77 (9%)
Query: 3 NKKHTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPVA------RNFG 56
+++ W F+LR + + G + L S +
Sbjct: 13 HRRKNWKVRKFILREDPAYLHYY-DPAGAEDPLGAIHLRGCVVTSVESNSNGRKSEEENL 71
Query: 57 FQITTWTKHWFVLRGCS 73
F+I T + + L+ +
Sbjct: 72 FEIITADEVHYFLQAAT 88
>d1x1ga1 b.55.1.1 (A:8-123) Pleckstrin-2 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 116
Score = 44.5 bits (104), Expect = 3e-07
Identities = 25/114 (21%), Positives = 42/114 (36%), Gaps = 18/114 (15%)
Query: 45 SLSEVPVARNF---------GFQITTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALN 95
SLS V ++ G + W FVLR + ++E G +L
Sbjct: 1 SLSTVELSGTVVKQGYLAKQGHKRKNWKVRRFVLRKDPAFLHYYDPSKEENRPVGGFSLR 60
Query: 96 N--VTSLSEVPVA-------RNFGFQITTWDSKRTILSAVTAGIRNNWMSAIKR 140
V++L + V + F++ T D + A + R W+ AIK+
Sbjct: 61 GSLVSALEDNGVPTGVKGNVQGNLFKVITKDDTHYYIQASSKAERAEWIEAIKK 114
Score = 36.0 bits (82), Expect = 4e-04
Identities = 13/75 (17%), Positives = 23/75 (30%)
Query: 3 NKKHTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPVARNFGFQITTW 62
+K+ W FVLR + ++E G +L + G +
Sbjct: 22 HKRKNWKVRRFVLRKDPAFLHYYDPSKEENRPVGGFSLRGSLVSALEDNGVPTGVKGNVQ 81
Query: 63 TKHWFVLRGCSLLYY 77
+ V+ YY
Sbjct: 82 GNLFKVITKDDTHYY 96
>d1btna_ b.55.1.1 (A:) beta-spectrin {Mouse (Mus musculus), brain
[TaxId: 10090]}
Length = 106
Score = 44.3 bits (103), Expect = 4e-07
Identities = 14/84 (16%), Positives = 29/84 (34%), Gaps = 4/84 (4%)
Query: 61 TWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPVA----RNFGFQITTW 116
+W + V+ + +Y+D K+ SG+ ++ + F++
Sbjct: 22 SWHNVYCVINNQEMGFYKDAKSAASGIPYHSEVPVSLKEAICEVALDYKKKKHVFKLRLS 81
Query: 117 DSKRTILSAVTAGIRNNWMSAIKR 140
D + A N W+ AI
Sbjct: 82 DGNEYLFQAKDDEEMNTWIQAISS 105
Score = 35.0 bits (79), Expect = 8e-04
Identities = 8/74 (10%), Positives = 25/74 (33%), Gaps = 4/74 (5%)
Query: 4 KKHTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPVA----RNFGFQI 59
+W + V+ + +Y+D K+ SG+ ++ + F++
Sbjct: 19 SSRSWHNVYCVINNQEMGFYKDAKSAASGIPYHSEVPVSLKEAICEVALDYKKKKHVFKL 78
Query: 60 TTWTKHWFVLRGCS 73
+ ++ +
Sbjct: 79 RLSDGNEYLFQAKD 92
>d2coca1 b.55.1.1 (A:8-106) FYVE, RhoGEF and PH domain containing
protein 3, FGD3 {Human (Homo sapiens) [TaxId: 9606]}
Length = 99
Score = 43.8 bits (102), Expect = 4e-07
Identities = 13/86 (15%), Positives = 27/86 (31%), Gaps = 4/86 (4%)
Query: 60 TTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPV---ARNFGFQITTW 116
TW++ W + + G L + L + P +++
Sbjct: 14 ETWSEVWAAIPMSDPQVLHLQGGSQDGRLPRTIPLPSCKLSVPDPEERLDSGHVWKLQWA 73
Query: 117 DSKRTILSAVTAGIRNNWMSAIKRTA 142
LSA +A ++ W+ + A
Sbjct: 74 KQSW-YLSASSAELQQQWLETLSTAA 98
Score = 34.1 bits (77), Expect = 0.002
Identities = 8/70 (11%), Positives = 20/70 (28%), Gaps = 3/70 (4%)
Query: 2 LNKKHTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPV---ARNFGFQ 58
TW++ W + + G L + L + P ++
Sbjct: 10 SESGETWSEVWAAIPMSDPQVLHLQGGSQDGRLPRTIPLPSCKLSVPDPEERLDSGHVWK 69
Query: 59 ITTWTKHWFV 68
+ + W++
Sbjct: 70 LQWAKQSWYL 79
>d1v89a_ b.55.1.1 (A:) Rho-GTPase-activating protein 25 (KIAA0053)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 118
Score = 44.1 bits (103), Expect = 5e-07
Identities = 21/107 (19%), Positives = 37/107 (34%), Gaps = 14/107 (13%)
Query: 56 GFQITTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPVARNFGFQITT 115
+ W + +FVLR L YY+D + + + + A F F+I
Sbjct: 18 RSIVKNWQQRYFVLRAQQLYYYKDEEDTKPQGCMYLPGCTIKEIATNPEEAGKFVFEIIP 77
Query: 116 WDSKRT-------ILSAVTAGIRNNWMSAIKRTAAMSLLDDKASPSS 155
+ +L A + W+ ++R A + PSS
Sbjct: 78 ASWDQNRMGQDSYVLMASSQAEMEEWVKFLRRVA-------GSGPSS 117
Score = 34.5 bits (78), Expect = 0.002
Identities = 16/75 (21%), Positives = 25/75 (33%), Gaps = 2/75 (2%)
Query: 3 NKKHTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPVARNFGFQITTW 62
+ W + +FVLR L YY+D + + + + A F F+I
Sbjct: 19 SIVKNWQQRYFVLRAQQLYYYKDEEDTKPQGCMYLPGCTIKEIATNPEEAGKFVFEI--I 76
Query: 63 TKHWFVLRGCSLLYY 77
W R Y
Sbjct: 77 PASWDQNRMGQDSYV 91
>d2cofa1 b.55.1.1 (A:8-102) KIAA1914 {Human (Homo sapiens) [TaxId:
9606]}
Length = 95
Score = 42.6 bits (99), Expect = 1e-06
Identities = 12/82 (14%), Positives = 29/82 (35%), Gaps = 2/82 (2%)
Query: 62 WTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPVARNFGFQITTWDSKRT 121
W W +R L +Y+D + ++L + + + F+I +
Sbjct: 15 WKSRWCSVRDNHLHFYQDRNRSKVA--QQPLSLVGCEVVPDPSPDHLYSFRILHKGEELA 72
Query: 122 ILSAVTAGIRNNWMSAIKRTAA 143
L A ++ +W+ + +
Sbjct: 73 KLEAKSSEEMGHWLGLLLSESG 94
Score = 33.8 bits (76), Expect = 0.002
Identities = 13/74 (17%), Positives = 24/74 (32%), Gaps = 4/74 (5%)
Query: 2 LNKK--HTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPVARNFGFQI 59
LN W W +R L +Y+D + ++L + + + F+I
Sbjct: 7 LNVLVNSQWKSRWCSVRDNHLHFYQDRNRSKVA--QQPLSLVGCEVVPDPSPDHLYSFRI 64
Query: 60 TTWTKHWFVLRGCS 73
+ L S
Sbjct: 65 LHKGEELAKLEAKS 78
>d1v88a_ b.55.1.1 (A:) Oxysterol binding protein-related protein 8
(ORP-8, KIAA1451) {Human (Homo sapiens) [TaxId: 9606]}
Length = 130
Score = 43.0 bits (100), Expect = 1e-06
Identities = 25/120 (20%), Positives = 39/120 (32%), Gaps = 33/120 (27%)
Query: 59 ITTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPVARNFGFQITTWDS 118
+ +WTK W VL+ LL Y+ K + G V LN + F F++
Sbjct: 20 LKSWTKLWCVLKPGVLLIYKTQKNGQ---WVGTVLLNACEIIERPSKKDGFCFKLFHPLE 76
Query: 119 KRT-----------------------ILSAVTAGIRNNWMSAIKRTAAMSLLDDKASPSS 155
+ I+ A + WM A++ K+ PSS
Sbjct: 77 QSIWAVKGPKGEAVGSITQPLPSSYLIIRATSESDGRCWMDALELAL-------KSGPSS 129
>d1btka_ b.55.1.1 (A:) Bruton's tyrosine kinase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 169
Score = 42.5 bits (99), Expect = 3e-06
Identities = 13/112 (11%), Positives = 26/112 (23%), Gaps = 29/112 (25%)
Query: 57 FQITTWTKHWFVLRGCSLLYYRDPKAEE----------------------------SGVL 88
+ K F+L L YY +
Sbjct: 19 TSPLNFKKCLFLLTVHKLSYYEYDFERGRRGSKKGSIDVEKITCVETVVPEKNPPPERQI 78
Query: 89 DGVVALNNVTSLSEVPVARNFGFQITTWDSKRTILSAVTAGIRNNWMSAIKR 140
++ + + FQ+ D + + T +R W+ +K
Sbjct: 79 PRRGEESSEMEQISIIERFPYPFQVVY-DEGPLYVFSPTEELRKRWIHQLKN 129
>d1u5fa1 b.55.1.1 (A:109-219) Src-associated adaptor protein Skap2
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 111
Score = 41.5 bits (96), Expect = 4e-06
Identities = 15/89 (16%), Positives = 29/89 (32%), Gaps = 1/89 (1%)
Query: 53 RNFGFQITTWTKHWFVLRGCSLLYYRDPKAEES-GVLDGVVALNNVTSLSEVPVARNFGF 111
++ F W K W L YY K ++ G + + ++ F
Sbjct: 20 KDHSFLGFEWQKRWCALSKTVFYYYGSDKDKQQKGEFAIDGYDVRMNNTLRKDGKKDCCF 79
Query: 112 QITTWDSKRTILSAVTAGIRNNWMSAIKR 140
+I D + +A + W+ +K
Sbjct: 80 EICAPDKRIYQFTAASPKDAEEWVQQLKF 108
Score = 27.2 bits (59), Expect = 0.49
Identities = 12/70 (17%), Positives = 20/70 (28%), Gaps = 1/70 (1%)
Query: 5 KHTWTKHWFVLRGCSLLYYRDPKAEES-GVLDGVVALNNVTSLSEVPVARNFGFQITTWT 63
W K W L YY K ++ G + + ++ F+I
Sbjct: 26 GFEWQKRWCALSKTVFYYYGSDKDKQQKGEFAIDGYDVRMNNTLRKDGKKDCCFEICAPD 85
Query: 64 KHWFVLRGCS 73
K + S
Sbjct: 86 KRIYQFTAAS 95
>d1qqga1 b.55.1.2 (A:12-114) Insulin receptor substrate 1, IRS-1
{Human (Homo sapiens) [TaxId: 9606]}
Length = 103
Score = 41.1 bits (95), Expect = 5e-06
Identities = 15/89 (16%), Positives = 35/89 (39%), Gaps = 9/89 (10%)
Query: 61 TWTKHWFVLRGCS-------LLYYRDPKAEESG--VLDGVVALNNVTSLSEVPVARNFGF 111
+ K +FVLR S L YY + K + L + ++++ ++N
Sbjct: 13 SMHKRFFVLRAASEAGGPARLEYYENEKKWRHKSSAPKRSIPLESCFNINKRADSKNKHL 72
Query: 112 QITTWDSKRTILSAVTAGIRNNWMSAIKR 140
+ ++A + +++W A+ +
Sbjct: 73 VALYTRDEHFAIAADSEAEQDSWYQALLQ 101
>d1v5ma_ b.55.1.1 (A:) SH2 and PH domain-containing adapter protein
APS {Mouse (Mus musculus) [TaxId: 10090]}
Length = 136
Score = 41.4 bits (96), Expect = 7e-06
Identities = 15/88 (17%), Positives = 34/88 (38%), Gaps = 7/88 (7%)
Query: 60 TTWTKHWFVLRGCSLL------YYRDPKAEESGVLDGVVALNNVTSLSEVP-VARNFGFQ 112
W K +LR ++ PKA V + A+ V + + ++ F
Sbjct: 40 AQWQKCRLLLRRAVAGERFRLEFFVPPKASRPKVSIPLSAIIEVRTTMPLEMPEKDNTFV 99
Query: 113 ITTWDSKRTILSAVTAGIRNNWMSAIKR 140
+ + IL + + +++W++ I+
Sbjct: 100 LKVENGAEYILETIDSLQKHSWVADIQG 127
>d1unqa_ b.55.1.1 (A:) Rac-alpha serine/threonine kinase {Human
(Homo sapiens) [TaxId: 9606]}
Length = 118
Score = 40.7 bits (94), Expect = 9e-06
Identities = 21/109 (19%), Positives = 34/109 (31%), Gaps = 10/109 (9%)
Query: 45 SLSEVPVARN-----FGFQITTWTKHWFVLRG--CSLLYYRDPKAEESGVLDGVVALNNV 97
S+S+V + + G I TW +F+L+ + Y P+ +
Sbjct: 1 SMSDVAIVKEGWLHKRGEYIKTWRPRYFLLKNDGTFIGYKERPQDVDQREAPLNNFSVAQ 60
Query: 98 TSLSEVPVARNFGFQITTWD---SKRTILSAVTAGIRNNWMSAIKRTAA 143
L + R F I T R W +AI+ A
Sbjct: 61 CQLMKTERPRPNTFIIRCLQWTTVIERTFHVETPEEREEWTTAIQTVAD 109
Score = 31.9 bits (71), Expect = 0.012
Identities = 11/70 (15%), Positives = 19/70 (27%), Gaps = 2/70 (2%)
Query: 3 NKKHTWTKHWFVLRG--CSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPVARNFGFQIT 60
TW +F+L+ + Y P+ + L + R F I
Sbjct: 18 EYIKTWRPRYFLLKNDGTFIGYKERPQDVDQREAPLNNFSVAQCQLMKTERPRPNTFIIR 77
Query: 61 TWTKHWFVLR 70
+ R
Sbjct: 78 CLQWTTVIER 87
>d1wjma_ b.55.1.1 (A:) beta-spectrin {Human (Homo sapiens), brain 2
isoform [TaxId: 9606]}
Length = 123
Score = 40.4 bits (93), Expect = 1e-05
Identities = 19/87 (21%), Positives = 33/87 (37%), Gaps = 4/87 (4%)
Query: 61 TWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPVA----RNFGFQITTW 116
+W + VLR SL +Y+D KA +GV ++ R F++
Sbjct: 31 SWQNVYCVLRRGSLGFYKDAKAASAGVPYHGEVPVSLARAQGSVAFDYRKRKHVFKLGLQ 90
Query: 117 DSKRTILSAVTAGIRNNWMSAIKRTAA 143
D K + A ++W+ + A
Sbjct: 91 DGKEYLFQAKDEAEMSSWLRVVNAAIA 117
Score = 30.4 bits (67), Expect = 0.046
Identities = 14/74 (18%), Positives = 26/74 (35%), Gaps = 4/74 (5%)
Query: 4 KKHTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPVA----RNFGFQI 59
+W + VLR SL +Y+D KA +GV ++ R F++
Sbjct: 28 ANRSWQNVYCVLRRGSLGFYKDAKAASAGVPYHGEVPVSLARAQGSVAFDYRKRKHVFKL 87
Query: 60 TTWTKHWFVLRGCS 73
++ +
Sbjct: 88 GLQDGKEYLFQAKD 101
>d2fjla1 b.55.1.1 (A:1-37,A:87-150) Phosphoinositide phospholipase
C, PLC-gamma-1 {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 101
Score = 39.6 bits (91), Expect = 2e-05
Identities = 12/86 (13%), Positives = 28/86 (32%), Gaps = 1/86 (1%)
Query: 61 TWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPVARNFGFQITTWDSKR 120
W H+FVL + Y + ++ + V A ++
Sbjct: 16 EWYPHYFVLTSSKIYYSEETSSDLLRGVLDVPACQIAIRPEGKNNRLFVFSISMPSVAQW 75
Query: 121 T-ILSAVTAGIRNNWMSAIKRTAAMS 145
+ ++A + +W+ I+ A +
Sbjct: 76 SLDVAADSQEELQDWVKKIREVAQTA 101
Score = 28.1 bits (61), Expect = 0.24
Identities = 11/65 (16%), Positives = 19/65 (29%), Gaps = 3/65 (4%)
Query: 3 NKKHTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPVARNFGFQITTW 62
H W H+FVL + Y + ++ GV+ + N F +
Sbjct: 12 PVNHEWYPHYFVLTSSKIYYSEETSSDLL---RGVLDVPACQIAIRPEGKNNRLFVFSIS 68
Query: 63 TKHWF 67
Sbjct: 69 MPSVA 73
>d1v5ua_ b.55.1.1 (A:) SET binding factor 1, Sbf1 {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 117
Score = 39.6 bits (91), Expect = 2e-05
Identities = 17/107 (15%), Positives = 26/107 (24%), Gaps = 15/107 (14%)
Query: 56 GFQITTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPVARN------- 108
G + W WFVL GV+ L V +++
Sbjct: 18 GAFMKPWKARWFVLDKTKHQLRYYDH-RMDTECKGVIDLAEVEAVAPGTPTIGAPKTVDE 76
Query: 109 FGFQITTWDSKRTILSAVTAGIRNNWMSAIKRTAAMSLLDDKASPSS 155
F + A W+ I+ + PSS
Sbjct: 77 KAFFDVKTTRRVYNFCAQDVPSAQQWVDRIQSCL-------SSGPSS 116
Score = 29.6 bits (65), Expect = 0.071
Identities = 15/75 (20%), Positives = 21/75 (28%), Gaps = 3/75 (4%)
Query: 3 NKKHTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPVARNFGFQITTW 62
W WFVL GV+ L V + P G T
Sbjct: 19 AFMKPWKARWFVLDKTKHQLRYYDH-RMDTECKGVIDLAEVE--AVAPGTPTIGAPKTVD 75
Query: 63 TKHWFVLRGCSLLYY 77
K +F ++ +Y
Sbjct: 76 EKAFFDVKTTRRVYN 90
>d2j59m1 b.55.1.1 (M:931-1063) Rho GTPase-activating protein 21
{Human (Homo sapiens) [TaxId: 9606]}
Length = 133
Score = 39.2 bits (90), Expect = 4e-05
Identities = 17/109 (15%), Positives = 36/109 (33%), Gaps = 2/109 (1%)
Query: 53 RNFGFQITTWTKHWFVLRGCSLLYYRD-PKAEESGVLDGVVALNNVTSLSEVPVARNFGF 111
+ G I W + + VLRG SL Y+D + + +++N +
Sbjct: 18 KRVGGSIRPWKQMYVVLRGHSLYLYKDKREQTTPSEEEQPISVNACLIDISYSETKRKNV 77
Query: 112 QITTWDSKRTILSAVTAGIRNNWMSAIKRTAAMSLLDDKASPSSSTVQQ 160
T + A W+ I + ++ +D + + +
Sbjct: 78 FRLTTSDCECLFQAEDRDDMLAWIKTI-QESSNLNEEDTGVTNRDLISR 125
Score = 26.9 bits (58), Expect = 0.71
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 3 NKKHTWTKHWFVLRGCSLLYYRDP 26
W + + VLRG SL Y+D
Sbjct: 22 GSIRPWKQMYVVLRGHSLYLYKDK 45
>d2dyna_ b.55.1.1 (A:) Dynamin {Human (Homo sapiens) [TaxId: 9606]}
Length = 111
Score = 38.4 bits (88), Expect = 4e-05
Identities = 18/96 (18%), Positives = 36/96 (37%), Gaps = 6/96 (6%)
Query: 53 RNFGFQITTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPVARNFGFQ 112
N G ++WFVL +L +Y+D + +E + V L +++
Sbjct: 12 NNIGIMKGGSKEYWFVLTAENLSWYKDDEEKEKKYMLSVDNLKLRDVEKGFMSSKHIFAL 71
Query: 113 ITTW------DSKRTILSAVTAGIRNNWMSAIKRTA 142
T D ++ L+ T ++W ++ R
Sbjct: 72 FNTEQRNVYKDYRQLELACETQEEVDSWKASFLRAG 107
Score = 28.4 bits (62), Expect = 0.18
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 5 KHTWTKHWFVLRGCSLLYYRDPK 27
K ++WFVL +L +Y+D +
Sbjct: 18 KGGSKEYWFVLTAENLSWYKDDE 40
>d2coda1 b.55.1.1 (A:8-109) Centaurin-delta 1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 102
Score = 37.6 bits (86), Expect = 8e-05
Identities = 17/90 (18%), Positives = 32/90 (35%), Gaps = 7/90 (7%)
Query: 61 TWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPVARNFGFQITTWDSKR 120
+ K W G S+ YY + K + ++++S V V + F++ T
Sbjct: 17 MFQKRWVKFDGLSISYYNNEKEMY------SKGIIPLSAISTVRVQGDNKFEVVTTQRTF 70
Query: 121 TILSAVTAGIRNNWMSAIKRTAAMSLLDDK 150
RN+W+S + L +
Sbjct: 71 V-FRVEKEEERNDWISILLNALKSQSLTSQ 99
Score = 29.1 bits (64), Expect = 0.10
Identities = 8/25 (32%), Positives = 11/25 (44%)
Query: 3 NKKHTWTKHWFVLRGCSLLYYRDPK 27
K + K W G S+ YY + K
Sbjct: 13 QGKRMFQKRWVKFDGLSISYYNNEK 37
>d1wg7a_ b.55.1.1 (A:) Dedicator of cytokinesis protein 9, DOCK9
{Human (Homo sapiens) [TaxId: 9606]}
Length = 150
Score = 38.2 bits (87), Expect = 9e-05
Identities = 22/121 (18%), Positives = 45/121 (37%), Gaps = 20/121 (16%)
Query: 53 RNFGFQITTWTKHWFVLRGCS-----LLYYRDPKAEESGVLDGVVALNNVTSLSEVPVAR 107
+ ++ + +F L L +Y+D K S G + L++ + + R
Sbjct: 31 SAISVTMRSFKRRFFHLIQLGDGSYNLNFYKDEK--ISKEPKGSIFLDSCMGVVQNNKVR 88
Query: 108 NFGFQITTWDSKRTILSAVTAGIRNNWMSAIKRTA-------------AMSLLDDKASPS 154
F F++ D +L+A + W++ + + S DD++ PS
Sbjct: 89 RFAFELKMQDKSSYLLAADSEVEMEEWITILNKILQLNFEAAMQEKRNGDSHEDDESGPS 148
Query: 155 S 155
S
Sbjct: 149 S 149
Score = 25.4 bits (54), Expect = 3.0
Identities = 15/76 (19%), Positives = 30/76 (39%), Gaps = 7/76 (9%)
Query: 3 NKKHTWTKHWFVLRGCS-----LLYYRDPKAEESGVLDGVVALNNVTSLSEVPVARNFGF 57
++ + +F L L +Y+D K S G + L++ + + R F F
Sbjct: 35 VTMRSFKRRFFHLIQLGDGSYNLNFYKDEK--ISKEPKGSIFLDSCMGVVQNNKVRRFAF 92
Query: 58 QITTWTKHWFVLRGCS 73
++ K ++L S
Sbjct: 93 ELKMQDKSSYLLAADS 108
>d1w1ha_ b.55.1.1 (A:) 3-phosphoinositide dependent protein kinase-1
{Human (Homo sapiens) [TaxId: 9606]}
Length = 147
Score = 38.2 bits (88), Expect = 1e-04
Identities = 12/81 (14%), Positives = 21/81 (25%), Gaps = 10/81 (12%)
Query: 61 TWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPVARNFGFQITTWDSKR 120
+ +L LYY DP + L S+ F+ +
Sbjct: 61 FARRRQLLLTEGPHLYYVDPVNKV---------LKGEIPWSQELRPEAKNFKTFFVHTPN 111
Query: 121 TILS-AVTAGIRNNWMSAIKR 140
+G + W I+
Sbjct: 112 RTYYLMDPSGNAHKWCRKIQE 132
Score = 33.5 bits (76), Expect = 0.005
Identities = 7/32 (21%), Positives = 13/32 (40%), Gaps = 2/32 (6%)
Query: 1 MLNKKH--TWTKHWFVLRGCSLLYYRDPKAEE 30
++K+ + +L LYY DP +
Sbjct: 53 PVDKRKGLFARRRQLLLTEGPHLYYVDPVNKV 84
>d1omwa2 b.55.1.1 (A:550-668) G-protein coupled receptor kinase 2
(beta-adrenergic receptor kinase 1) {Cow (Bos taurus)
[TaxId: 9913]}
Length = 119
Score = 37.3 bits (85), Expect = 1e-04
Identities = 11/86 (12%), Positives = 29/86 (33%), Gaps = 5/86 (5%)
Query: 60 TTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPVARNFGFQITTWDSK 119
T W + +F L L + + +A ++ + + S+ E + + K
Sbjct: 25 TQWQRRYFYLFPNRLEWRGEGEAP-----QSLLTMEEIQSVEETQIKERKCLLLKIRGGK 79
Query: 120 RTILSAVTAGIRNNWMSAIKRTAAMS 145
+ +L + W ++ +
Sbjct: 80 QFVLQCDSDPELVQWKKELRDAYREA 105
Score = 26.9 bits (58), Expect = 0.73
Identities = 4/24 (16%), Positives = 8/24 (33%)
Query: 3 NKKHTWTKHWFVLRGCSLLYYRDP 26
W + +F L L + +
Sbjct: 22 PFLTQWQRRYFYLFPNRLEWRGEG 45
>d1xcga2 b.55.1.1 (A:942-1081) Rho guanine nucleotide exchange
factor 11, PDZ-RhoGEF {Human (Homo sapiens) [TaxId:
9606]}
Length = 140
Score = 34.7 bits (79), Expect = 0.002
Identities = 16/86 (18%), Positives = 30/86 (34%), Gaps = 6/86 (6%)
Query: 59 ITTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPVARNFGFQITTWDS 118
+ +L+ S +++ V+ LN V + V + F I T
Sbjct: 54 LLQKQDEKLLLKCHSKTAVGSSDSKQ--TFSPVLKLNAV-LIRSVATDKRAFFIICTSKL 110
Query: 119 KRT---ILSAVTAGIRNNWMSAIKRT 141
L A+T+ +N WM ++
Sbjct: 111 GPPQIYELVALTSSDKNTWMELLEEA 136
>d2coaa1 b.55.1.1 (A:8-119) Protein kinase c, d2 type {Human (Homo
sapiens) [TaxId: 9606]}
Length = 112
Score = 33.8 bits (76), Expect = 0.002
Identities = 16/104 (15%), Positives = 32/104 (30%), Gaps = 15/104 (14%)
Query: 55 FGFQITTWTKHWFVLRGCSLLYYRDPKAEES-GVLDGVVALNNVTSLSEVPVA---RNFG 110
+ + T +H++ L + +++ + L ++ + V
Sbjct: 10 YSNKDTLRKRHYWRLDCKCITLFQNNTTNRYYKEIPLSEILTVESAQNFSLVPPGTNPHC 69
Query: 111 FQITTWD----------SKRTILSAVTAGIRNNWMSAIKRTAAM 144
F+I T + S A W +AI R A M
Sbjct: 70 FEIVTANATYFVGEMPGGTPGGPSGQGAEAARGWETAI-RQALM 112
Score = 26.1 bits (56), Expect = 1.2
Identities = 11/70 (15%), Positives = 24/70 (34%), Gaps = 4/70 (5%)
Query: 3 NKKHTWTKHWFVLRGCSLLYYRDPKAEES-GVLDGVVALNNVTSLSEVPVA---RNFGFQ 58
NK +H++ L + +++ + L ++ + V F+
Sbjct: 12 NKDTLRKRHYWRLDCKCITLFQNNTTNRYYKEIPLSEILTVESAQNFSLVPPGTNPHCFE 71
Query: 59 ITTWTKHWFV 68
I T +FV
Sbjct: 72 IVTANATYFV 81
>d1x1fa1 b.55.1.1 (A:8-143) Signal-transducing adaptor protein 1,
STAP-1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 136
Score = 34.2 bits (77), Expect = 0.003
Identities = 15/90 (16%), Positives = 25/90 (27%), Gaps = 2/90 (2%)
Query: 56 GFQITTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPVARNFGFQITT 115
+ +W LRG +L +Y D K+ +V L +T +
Sbjct: 21 RSGYREYEHYWTELRGTTLFFYTDKKSIIYVDKLDIVDLTCLTEQNSTEKNCA--KFTLV 78
Query: 116 WDSKRTILSAVTAGIRNNWMSAIKRTAAMS 145
+ L W I +S
Sbjct: 79 LPKEEVQLKTENTESGEEWRGFILTVTELS 108
Score = 25.3 bits (54), Expect = 3.1
Identities = 8/25 (32%), Positives = 13/25 (52%)
Query: 3 NKKHTWTKHWFVLRGCSLLYYRDPK 27
+ + +W LRG +L +Y D K
Sbjct: 22 SGYREYEHYWTELRGTTLFFYTDKK 46
>d1wgqa_ b.55.1.1 (A:) FYVE, RhoGEF and PH domain containing protein
6, Fgd6 (KIAA1362) {Mouse (Mus musculus) [TaxId: 10090]}
Length = 109
Score = 32.7 bits (73), Expect = 0.005
Identities = 18/95 (18%), Positives = 32/95 (33%), Gaps = 9/95 (9%)
Query: 61 TWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPVARNFGFQITTWDSKR 120
W WFV++ L Y + + L+ L +L + + + FQ+
Sbjct: 23 PWKHLWFVIKNKVLYTYAASEDVAA--LESQPLLGFTVTLVKDENSESKVFQLLHKGMVF 80
Query: 121 TILSAVTAGIRNNWMSAIKRTAAMSLLDDKASPSS 155
+ A A W+ A + + PSS
Sbjct: 81 YVFKADDAHSTQRWIDAFQEGTV-------SGPSS 108
Score = 25.4 bits (54), Expect = 2.3
Identities = 10/66 (15%), Positives = 19/66 (28%)
Query: 3 NKKHTWTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPVARNFGFQITTW 62
K W WFV++ L Y + + ++ E ++ F
Sbjct: 19 GSKKPWKHLWFVIKNKVLYTYAASEDVAALESQPLLGFTVTLVKDENSESKVFQLLHKGM 78
Query: 63 TKHWFV 68
+ F
Sbjct: 79 VFYVFK 84
>d1v61a_ b.55.1.1 (A:) Rac/CDC42 GEF 6, alpha-pix {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 132
Score = 31.2 bits (70), Expect = 0.021
Identities = 11/80 (13%), Positives = 26/80 (32%), Gaps = 1/80 (1%)
Query: 62 WTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPV-ARNFGFQITTWDSKR 120
+ +F+L L+ + G + + + + + F+IT +R
Sbjct: 44 KEERYFLLFSSVLIMLSASPRMSGFMYQGKIPIAGMVVNRLDEIEGSDCMFEITGSTVER 103
Query: 121 TILSAVTAGIRNNWMSAIKR 140
++ WM + R
Sbjct: 104 IVVHCNNNQDFQEWMEQLNR 123
>d1wi1a_ b.55.1.1 (A:) Calcium-dependent activator protein for
secretion, CAPS {Human (Homo sapiens) [TaxId: 9606]}
Length = 126
Score = 30.8 bits (68), Expect = 0.037
Identities = 17/105 (16%), Positives = 33/105 (31%), Gaps = 8/105 (7%)
Query: 3 NKKHTWTKHWFVLR-GCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPVARNFGFQITT 61
N W K +FVL + E+ ++ L+ T P G +
Sbjct: 20 NVWKRWKKRFFVLVQVSQYTFAMCSYREKKAEPQELLQLDGYTVDYTDPQPGLEGGRA-- 77
Query: 62 WTKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPVA 106
+ ++ + + ++ + V A+ T S PV
Sbjct: 78 ---FFNAVKEGDTVIFASDDEQD--RILWVQAMYRATGQSHKPVP 117
>d1v5pa_ b.55.1.1 (A:) Tapp2 {Mouse (Mus musculus) [TaxId: 10090]}
Length = 126
Score = 30.0 bits (66), Expect = 0.058
Identities = 16/87 (18%), Positives = 32/87 (36%), Gaps = 7/87 (8%)
Query: 61 TWTKHWFVL---RGCSLLYYRDPKAEESGVLD-GVVALNNVTSLSEVPVARNFGFQITTW 116
+ + +F+L C L Y +P+ G G + L ++ +S +
Sbjct: 31 KFLRRYFILDTQANCLLWYMDNPQNLAVGAGAVGSLQLTYISKVSIATPKQKPKTPFCFV 90
Query: 117 ---DSKRTILSAVTAGIRNNWMSAIKR 140
S+R L A +W+ A+ +
Sbjct: 91 INALSQRYFLQANDQKDLKDWVEALNQ 117
>d1txda2 b.55.1.1 (A:1020-1133) Rho guanine nucleotide exchange
factor 12 {Human (Homo sapiens), gamma isoform [TaxId:
9606]}
Length = 114
Score = 28.5 bits (63), Expect = 0.21
Identities = 15/59 (25%), Positives = 22/59 (37%), Gaps = 3/59 (5%)
Query: 87 VLDGVVALNNVTSLSEVPVARNFGFQITTWDSKRT--ILSAVTAGIRNNWMSAIKRTAA 143
V+ L+ V + +V F I+ D+ L A T + W I R AA
Sbjct: 56 TFSPVIKLSTVL-VRQVATDNKALFVISMSDNGAQIYELVAQTVSEKTVWQDLICRMAA 113
>d1ki1b2 b.55.1.1 (B:1439-1580) GEF of intersectin {Human (Homo
sapiens) [TaxId: 9606]}
Length = 142
Score = 28.2 bits (62), Expect = 0.29
Identities = 14/88 (15%), Positives = 28/88 (31%)
Query: 63 TKHWFVLRGCSLLYYRDPKAEESGVLDGVVALNNVTSLSEVPVARNFGFQITTWDSKRTI 122
T+ L PK+ + + LN V + + + +
Sbjct: 52 TQITKPLGSSGTDKVFSPKSNLQYMYKTPIFLNEVLVKLPTDPSGDEPIFHISHIDRVYT 111
Query: 123 LSAVTAGIRNNWMSAIKRTAAMSLLDDK 150
L A + R W+ IK + + + +K
Sbjct: 112 LRAESINERTAWVQKIKAASELYIETEK 139
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.318 0.130 0.401
Gapped
Lambda K H
0.267 0.0522 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 594,060
Number of extensions: 23904
Number of successful extensions: 131
Number of sequences better than 10.0: 1
Number of HSP's gapped: 104
Number of HSP's successfully gapped: 77
Length of query: 160
Length of database: 2,407,596
Length adjustment: 78
Effective length of query: 82
Effective length of database: 1,336,656
Effective search space: 109605792
Effective search space used: 109605792
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 49 (23.1 bits)