Query psy893
Match_columns 523
No_of_seqs 266 out of 2312
Neff 9.9
Searched_HMMs 29240
Date Fri Aug 16 23:05:12 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy893.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/893hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4dgk_A Phytoene dehydrogenase; 100.0 1.3E-64 4.3E-69 529.0 29.3 475 1-522 8-492 (501)
2 3ka7_A Oxidoreductase; structu 100.0 1.4E-35 4.7E-40 302.9 33.1 401 1-518 7-424 (425)
3 3nrn_A Uncharacterized protein 100.0 5.6E-34 1.9E-38 290.4 28.3 385 1-517 7-403 (421)
4 1s3e_A Amine oxidase [flavin-c 100.0 1.9E-31 6.4E-36 279.1 24.1 423 1-522 11-455 (520)
5 2yg5_A Putrescine oxidase; oxi 100.0 2.5E-30 8.6E-35 266.1 20.5 420 1-522 12-452 (453)
6 2ivd_A PPO, PPOX, protoporphyr 100.0 3.5E-30 1.2E-34 266.9 17.1 413 1-522 23-474 (478)
7 2bcg_G Secretory pathway GDP d 100.0 3.3E-28 1.1E-32 249.3 20.2 319 1-400 18-369 (453)
8 2vvm_A Monoamine oxidase N; FA 100.0 2.5E-27 8.7E-32 246.4 24.4 418 1-522 46-486 (495)
9 1sez_A Protoporphyrinogen oxid 100.0 3.5E-29 1.2E-33 261.1 9.2 422 1-522 20-494 (504)
10 3i6d_A Protoporphyrinogen oxid 99.9 5.7E-27 1.9E-31 242.2 18.4 423 1-522 12-469 (470)
11 1d5t_A Guanine nucleotide diss 99.9 5.8E-27 2E-31 238.5 16.9 322 1-403 13-360 (433)
12 3nks_A Protoporphyrinogen oxid 99.9 2.3E-27 8E-32 245.6 14.1 422 1-521 9-474 (477)
13 2jae_A L-amino acid oxidase; o 99.9 1.4E-25 4.7E-30 232.9 19.1 244 222-522 231-486 (489)
14 3lov_A Protoporphyrinogen oxid 99.9 2.2E-25 7.6E-30 230.5 18.6 417 1-522 11-466 (475)
15 1b37_A Protein (polyamine oxid 99.9 2.1E-25 7.1E-30 230.4 17.6 243 225-522 201-459 (472)
16 4gde_A UDP-galactopyranose mut 99.9 1.3E-25 4.5E-30 234.6 12.6 277 1-325 17-308 (513)
17 2iid_A L-amino-acid oxidase; f 99.9 1.2E-23 4E-28 218.9 19.6 424 1-522 40-485 (498)
18 1rsg_A FMS1 protein; FAD bindi 99.9 2.3E-23 7.8E-28 217.4 20.1 263 1-325 15-304 (516)
19 3k7m_X 6-hydroxy-L-nicotine ox 99.9 1.5E-20 5.1E-25 191.8 28.2 398 1-520 8-425 (431)
20 4dsg_A UDP-galactopyranose mut 99.9 8.3E-22 2.8E-26 203.2 14.8 413 1-518 16-452 (484)
21 2b9w_A Putative aminooxidase; 99.8 1.3E-20 4.4E-25 191.9 17.6 259 1-312 13-279 (424)
22 3qj4_A Renalase; FAD/NAD(P)-bi 99.8 3.4E-19 1.2E-23 175.9 21.7 229 224-521 106-342 (342)
23 3p1w_A Rabgdi protein; GDI RAB 99.8 6.5E-20 2.2E-24 185.5 16.3 259 1-286 27-313 (475)
24 1vg0_A RAB proteins geranylger 99.8 1.7E-18 5.7E-23 180.0 24.2 262 57-399 241-507 (650)
25 2xag_A Lysine-specific histone 99.8 6.7E-19 2.3E-23 190.6 21.8 248 220-521 562-829 (852)
26 2z3y_A Lysine-specific histone 99.8 6.5E-19 2.2E-23 188.3 19.9 249 220-522 391-659 (662)
27 4gut_A Lysine-specific histone 99.8 9.8E-19 3.3E-23 188.2 20.9 243 220-519 524-775 (776)
28 3ayj_A Pro-enzyme of L-phenyla 99.8 2.4E-18 8.3E-23 181.1 18.7 99 222-322 339-483 (721)
29 1i8t_A UDP-galactopyranose mut 99.7 7.4E-17 2.5E-21 160.2 11.7 243 1-325 8-259 (367)
30 1yvv_A Amine oxidase, flavin-c 99.7 2.9E-15 9.8E-20 147.2 17.9 221 224-522 104-328 (336)
31 1v0j_A UDP-galactopyranose mut 99.6 2.6E-16 8.9E-21 158.1 5.1 246 1-324 14-272 (399)
32 2bi7_A UDP-galactopyranose mut 99.5 2.9E-14 1E-18 142.3 6.7 239 1-323 10-260 (384)
33 2e1m_A L-glutamate oxidase; L- 99.4 1.1E-12 3.8E-17 129.0 13.7 66 1-66 51-129 (376)
34 3hdq_A UDP-galactopyranose mut 99.4 1.1E-13 3.6E-18 137.5 6.3 240 1-325 36-287 (397)
35 3dme_A Conserved exported prot 99.1 8.5E-10 2.9E-14 109.3 14.1 58 229-287 149-209 (369)
36 3nyc_A D-arginine dehydrogenas 99.0 4.3E-09 1.5E-13 104.7 14.7 56 229-287 153-209 (381)
37 3oz2_A Digeranylgeranylglycero 99.0 1.6E-08 5.5E-13 101.0 17.3 63 231-294 103-169 (397)
38 3dje_A Fructosyl amine: oxygen 98.9 7.3E-09 2.5E-13 105.3 14.0 63 229-294 160-226 (438)
39 3ps9_A TRNA 5-methylaminomethy 98.8 3.4E-08 1.2E-12 106.0 15.2 67 224-294 408-478 (676)
40 3pvc_A TRNA 5-methylaminomethy 98.8 3.9E-08 1.3E-12 105.6 15.4 62 224-287 403-469 (689)
41 1y56_B Sarcosine oxidase; dehy 98.8 5.7E-08 1.9E-12 96.7 15.2 57 229-287 148-205 (382)
42 2gag_B Heterotetrameric sarcos 98.8 4E-08 1.4E-12 98.6 13.1 57 229-287 173-230 (405)
43 4at0_A 3-ketosteroid-delta4-5a 98.8 1.6E-07 5.6E-12 97.1 18.0 61 227-287 199-264 (510)
44 2uzz_A N-methyl-L-tryptophan o 98.8 8.8E-08 3E-12 94.9 14.8 61 229-294 148-209 (372)
45 3da1_A Glycerol-3-phosphate de 98.7 2.3E-08 8E-13 104.5 9.6 58 229-287 169-232 (561)
46 1qo8_A Flavocytochrome C3 fuma 98.7 2.9E-07 9.8E-12 96.5 17.0 59 229-287 249-312 (566)
47 1pj5_A N,N-dimethylglycine oxi 98.7 2.8E-07 9.5E-12 101.2 17.5 57 229-287 150-207 (830)
48 2gf3_A MSOX, monomeric sarcosi 98.7 2.9E-07 9.8E-12 91.8 15.5 56 230-287 150-205 (389)
49 1y0p_A Fumarate reductase flav 98.6 8.8E-07 3E-11 93.0 18.9 57 230-286 255-316 (571)
50 3v76_A Flavoprotein; structura 98.6 2.3E-07 7.9E-12 93.1 13.7 61 224-287 126-187 (417)
51 1ryi_A Glycine oxidase; flavop 98.6 1.5E-07 5.1E-12 93.6 11.7 55 230-287 164-219 (382)
52 2i0z_A NAD(FAD)-utilizing dehy 98.6 2.5E-07 8.6E-12 94.0 12.5 59 228-287 132-191 (447)
53 3kkj_A Amine oxidase, flavin-c 98.6 2.4E-08 8.4E-13 94.4 4.7 47 1-48 9-55 (336)
54 1d4d_A Flavocytochrome C fumar 98.6 1.5E-06 5E-11 91.2 17.9 59 229-287 254-317 (572)
55 2oln_A NIKD protein; flavoprot 98.6 4.4E-07 1.5E-11 90.8 13.2 57 229-287 152-208 (397)
56 3cgv_A Geranylgeranyl reductas 98.6 1.7E-07 5.7E-12 93.7 10.1 63 230-293 102-168 (397)
57 2rgh_A Alpha-glycerophosphate 98.6 3.9E-07 1.3E-11 95.4 12.8 58 229-287 187-250 (571)
58 3nlc_A Uncharacterized protein 98.5 5.3E-07 1.8E-11 93.2 10.6 57 230-287 220-277 (549)
59 3axb_A Putative oxidoreductase 98.4 1.4E-06 4.8E-11 88.6 12.7 57 229-287 180-254 (448)
60 2gqf_A Hypothetical protein HI 98.4 4E-06 1.4E-10 83.7 15.3 62 224-287 103-168 (401)
61 2wdq_A Succinate dehydrogenase 98.2 3.3E-05 1.1E-09 81.0 18.1 57 230-287 143-206 (588)
62 2x3n_A Probable FAD-dependent 98.2 2.8E-06 9.5E-11 85.0 9.5 64 230-294 107-173 (399)
63 2qcu_A Aerobic glycerol-3-phos 98.2 2.5E-05 8.7E-10 80.4 16.5 57 229-287 148-210 (501)
64 3nix_A Flavoprotein/dehydrogen 98.2 1.2E-05 3.9E-10 81.0 12.9 65 230-294 106-173 (421)
65 2bs2_A Quinol-fumarate reducta 98.2 2.5E-05 8.4E-10 82.8 15.1 57 230-287 158-220 (660)
66 3ihg_A RDME; flavoenzyme, anth 98.2 1.8E-05 6.1E-10 82.4 13.9 63 230-294 120-190 (535)
67 3e1t_A Halogenase; flavoprotei 98.1 3E-06 1E-10 87.7 7.5 63 230-293 111-178 (512)
68 3atr_A Conserved archaeal prot 98.1 4.4E-06 1.5E-10 85.0 8.7 64 230-294 100-169 (453)
69 2h88_A Succinate dehydrogenase 98.1 5.7E-05 1.9E-09 79.4 16.8 57 230-287 155-217 (621)
70 3alj_A 2-methyl-3-hydroxypyrid 98.1 1.2E-05 4E-10 79.8 10.6 60 230-294 107-167 (379)
71 3i3l_A Alkylhalidase CMLS; fla 98.1 3.1E-05 1.1E-09 81.0 13.7 64 229-293 127-194 (591)
72 3lxd_A FAD-dependent pyridine 98.1 4.4E-05 1.5E-09 76.6 14.2 57 229-286 193-250 (415)
73 1chu_A Protein (L-aspartate ox 98.0 4E-05 1.4E-09 79.5 13.8 57 230-287 138-208 (540)
74 3rp8_A Flavoprotein monooxygen 98.0 4.4E-06 1.5E-10 83.7 6.4 60 230-293 127-187 (407)
75 2gmh_A Electron transfer flavo 98.0 2.3E-05 8E-10 82.1 11.9 62 229-290 143-220 (584)
76 2qa2_A CABE, polyketide oxygen 98.0 3.9E-05 1.3E-09 78.9 13.4 63 230-294 107-173 (499)
77 3fg2_P Putative rubredoxin red 98.0 4.2E-06 1.4E-10 83.8 5.9 57 229-286 183-240 (404)
78 2qa1_A PGAE, polyketide oxygen 98.0 2.4E-05 8.2E-10 80.5 11.4 63 230-294 106-172 (500)
79 4ap3_A Steroid monooxygenase; 98.0 4E-05 1.4E-09 79.6 12.7 56 231-286 100-158 (549)
80 2e5v_A L-aspartate oxidase; ar 98.0 5.3E-05 1.8E-09 77.3 13.3 56 230-287 119-176 (472)
81 2vou_A 2,6-dihydroxypyridine h 98.0 2.3E-05 7.8E-10 78.2 10.1 60 231-294 100-160 (397)
82 3gwf_A Cyclohexanone monooxyge 97.9 4.2E-05 1.4E-09 79.3 11.8 57 231-287 88-147 (540)
83 3uox_A Otemo; baeyer-villiger 97.9 3.9E-05 1.3E-09 79.7 11.3 56 231-286 88-146 (545)
84 1kf6_A Fumarate reductase flav 97.9 0.00013 4.4E-09 76.7 15.3 57 230-287 134-197 (602)
85 1k0i_A P-hydroxybenzoate hydro 97.9 2.8E-05 9.5E-10 77.4 9.8 64 230-294 103-170 (394)
86 3fmw_A Oxygenase; mithramycin, 97.9 4.1E-05 1.4E-09 79.9 11.0 63 230-294 148-214 (570)
87 1jnr_A Adenylylsulfate reducta 97.8 0.00032 1.1E-08 74.3 15.7 56 231-287 152-218 (643)
88 3fpz_A Thiazole biosynthetic e 97.7 2.1E-05 7.1E-10 76.2 3.9 34 1-34 72-107 (326)
89 2zxi_A TRNA uridine 5-carboxym 97.6 0.00029 9.8E-09 73.3 11.6 56 230-287 123-180 (637)
90 3ces_A MNMG, tRNA uridine 5-ca 97.6 0.00033 1.1E-08 73.1 11.2 56 230-287 124-181 (651)
91 1n4w_A CHOD, cholesterol oxida 97.5 0.0016 5.4E-08 66.9 14.8 58 231-288 222-289 (504)
92 4gcm_A TRXR, thioredoxin reduc 97.3 0.00016 5.6E-09 69.3 4.3 33 1-34 13-45 (312)
93 3urh_A Dihydrolipoyl dehydroge 97.1 0.00024 8.3E-09 72.9 3.7 56 229-286 238-299 (491)
94 4a5l_A Thioredoxin reductase; 97.1 0.00027 9.2E-09 67.7 3.7 28 1-28 11-38 (314)
95 3lzw_A Ferredoxin--NADP reduct 97.1 0.00031 1.1E-08 67.8 4.1 34 1-34 14-47 (332)
96 2vdc_G Glutamate synthase [NAD 97.1 0.00031 1.1E-08 71.1 4.1 34 1-34 129-162 (456)
97 4fk1_A Putative thioredoxin re 97.1 0.0003 1E-08 67.1 3.9 31 1-32 13-43 (304)
98 4g6h_A Rotenone-insensitive NA 97.1 0.0022 7.7E-08 65.7 10.6 55 229-285 271-330 (502)
99 4a9w_A Monooxygenase; baeyer-v 97.0 0.00037 1.3E-08 67.9 4.2 55 231-287 77-132 (357)
100 3o0h_A Glutathione reductase; 97.0 0.0003 1E-08 72.1 3.6 56 230-287 232-288 (484)
101 3l8k_A Dihydrolipoyl dehydroge 97.0 0.00033 1.1E-08 71.4 3.7 34 1-34 11-44 (466)
102 1rp0_A ARA6, thiazole biosynth 97.0 0.00041 1.4E-08 65.5 4.1 56 230-286 119-190 (284)
103 3jsk_A Cypbp37 protein; octame 97.0 0.00039 1.3E-08 66.9 3.9 33 1-33 86-120 (344)
104 4hb9_A Similarities with proba 97.0 0.0004 1.4E-08 69.2 4.1 58 232-293 114-172 (412)
105 2zbw_A Thioredoxin reductase; 97.0 0.00037 1.3E-08 67.5 3.7 34 1-34 12-45 (335)
106 3ab1_A Ferredoxin--NADP reduct 97.0 0.00038 1.3E-08 68.2 3.8 55 231-286 203-262 (360)
107 2gjc_A Thiazole biosynthetic e 97.0 0.00039 1.3E-08 66.4 3.7 33 1-33 72-106 (326)
108 3f8d_A Thioredoxin reductase ( 97.0 0.00044 1.5E-08 66.4 4.0 32 1-34 22-53 (323)
109 3t37_A Probable dehydrogenase; 97.0 0.0023 7.8E-08 66.2 9.7 50 242-293 223-276 (526)
110 4dna_A Probable glutathione re 96.9 0.00037 1.3E-08 70.9 3.3 57 229-287 210-268 (463)
111 1c0p_A D-amino acid oxidase; a 96.9 0.00055 1.9E-08 67.1 4.4 50 229-294 141-190 (363)
112 3itj_A Thioredoxin reductase 1 96.9 0.00045 1.5E-08 66.8 3.7 35 1-35 29-67 (338)
113 2q7v_A Thioredoxin reductase; 96.9 0.00061 2.1E-08 65.6 4.3 33 1-34 15-47 (325)
114 2qae_A Lipoamide, dihydrolipoy 96.9 0.00048 1.6E-08 70.2 3.7 56 230-287 215-276 (468)
115 3cty_A Thioredoxin reductase; 96.8 0.00066 2.3E-08 65.2 4.2 33 1-34 23-55 (319)
116 1w4x_A Phenylacetone monooxyge 96.8 0.00063 2.2E-08 70.6 4.3 34 1-34 23-56 (542)
117 3g3e_A D-amino-acid oxidase; F 96.8 0.00039 1.3E-08 67.9 2.4 51 229-294 141-191 (351)
118 3r9u_A Thioredoxin reductase; 96.8 0.00056 1.9E-08 65.3 3.3 33 1-34 11-44 (315)
119 1mo9_A ORF3; nucleotide bindin 96.8 0.00068 2.3E-08 70.1 4.0 57 230-286 255-315 (523)
120 1v59_A Dihydrolipoamide dehydr 96.8 0.00065 2.2E-08 69.4 3.7 57 230-287 224-287 (478)
121 2gv8_A Monooxygenase; FMO, FAD 96.8 0.00074 2.5E-08 68.3 4.0 34 1-34 13-48 (447)
122 2yqu_A 2-oxoglutarate dehydrog 96.8 0.00068 2.3E-08 68.8 3.7 57 229-287 207-264 (455)
123 1zmd_A Dihydrolipoyl dehydroge 96.8 0.00069 2.4E-08 69.1 3.6 56 230-286 220-281 (474)
124 3k30_A Histamine dehydrogenase 96.7 0.00065 2.2E-08 72.7 3.6 35 1-35 398-432 (690)
125 3lad_A Dihydrolipoamide dehydr 96.7 0.00079 2.7E-08 68.7 3.9 57 229-287 220-280 (476)
126 1dxl_A Dihydrolipoamide dehydr 96.7 0.00078 2.7E-08 68.6 3.8 56 230-287 218-279 (470)
127 3c4n_A Uncharacterized protein 96.7 0.00087 3E-08 66.8 4.1 56 229-287 171-236 (405)
128 2xdo_A TETX2 protein; tetracyc 96.7 0.00086 2.9E-08 66.7 4.0 59 231-293 129-188 (398)
129 3ic9_A Dihydrolipoamide dehydr 96.7 0.00083 2.8E-08 68.8 3.6 55 230-287 215-274 (492)
130 3c4a_A Probable tryptophan hyd 96.7 0.0011 3.8E-08 65.5 4.4 51 230-293 98-148 (381)
131 1ojt_A Surface protein; redox- 96.7 0.00086 3E-08 68.5 3.7 56 230-287 226-286 (482)
132 2e1m_C L-glutamate oxidase; L- 96.7 0.00011 3.7E-09 64.2 -2.6 93 417-522 56-153 (181)
133 2bry_A NEDD9 interacting prote 96.6 0.0011 3.9E-08 67.9 4.3 58 230-287 166-230 (497)
134 3c96_A Flavin-containing monoo 96.6 0.0013 4.5E-08 65.6 4.7 62 230-294 107-176 (410)
135 3dgz_A Thioredoxin reductase 2 96.6 0.0012 4E-08 67.7 4.2 57 230-287 225-287 (488)
136 3d1c_A Flavin-containing putat 96.6 0.0012 4E-08 64.8 4.0 54 231-287 89-143 (369)
137 2q0l_A TRXR, thioredoxin reduc 96.6 0.0014 4.7E-08 62.6 4.3 33 1-34 8-41 (311)
138 3dk9_A Grase, GR, glutathione 96.6 0.0011 3.7E-08 67.8 3.7 58 230-287 228-293 (478)
139 3qfa_A Thioredoxin reductase 1 96.6 0.0013 4.5E-08 67.9 4.2 58 230-287 250-315 (519)
140 1o94_A Tmadh, trimethylamine d 96.6 0.0012 4.2E-08 70.9 4.1 35 1-35 396-430 (729)
141 2xve_A Flavin-containing monoo 96.5 0.0015 5.1E-08 66.4 4.4 58 230-287 101-166 (464)
142 1vdc_A NTR, NADPH dependent th 96.5 0.0013 4.3E-08 63.6 3.7 33 1-33 15-51 (333)
143 3fbs_A Oxidoreductase; structu 96.5 0.0014 5E-08 61.8 3.8 28 1-28 9-36 (297)
144 2hqm_A GR, grase, glutathione 96.5 0.0013 4.4E-08 67.2 3.6 58 230-287 226-285 (479)
145 1zk7_A HGII, reductase, mercur 96.5 0.0013 4.3E-08 67.0 3.5 56 230-287 216-271 (467)
146 2a8x_A Dihydrolipoyl dehydroge 96.5 0.0014 4.8E-08 66.6 3.7 56 230-287 212-271 (464)
147 1ges_A Glutathione reductase; 96.5 0.0013 4.5E-08 66.5 3.3 57 230-287 208-265 (450)
148 3ihm_A Styrene monooxygenase A 96.4 0.0013 4.5E-08 66.1 3.3 27 1-27 29-55 (430)
149 1trb_A Thioredoxin reductase; 96.4 0.0015 5E-08 62.7 3.4 57 230-287 184-247 (320)
150 2r9z_A Glutathione amide reduc 96.4 0.0015 5.2E-08 66.3 3.7 56 230-287 207-264 (463)
151 1lvl_A Dihydrolipoamide dehydr 96.4 0.0014 4.8E-08 66.5 3.3 54 230-287 212-268 (458)
152 1ebd_A E3BD, dihydrolipoamide 96.4 0.0017 5.7E-08 65.9 3.7 56 230-287 211-270 (455)
153 1xdi_A RV3303C-LPDA; reductase 96.4 0.0012 4.1E-08 67.8 2.6 56 230-287 223-279 (499)
154 2r0c_A REBC; flavin adenine di 96.4 0.0022 7.5E-08 66.7 4.6 59 231-294 139-203 (549)
155 1fec_A Trypanothione reductase 96.4 0.0017 5.9E-08 66.4 3.6 57 230-287 231-288 (490)
156 3dgh_A TRXR-1, thioredoxin red 96.3 0.0022 7.7E-08 65.5 4.1 56 230-286 227-288 (483)
157 2a87_A TRXR, TR, thioredoxin r 96.3 0.0018 6.1E-08 62.6 3.2 33 1-34 21-53 (335)
158 2eq6_A Pyruvate dehydrogenase 96.3 0.002 6.9E-08 65.4 3.7 55 230-286 210-270 (464)
159 3pl8_A Pyranose 2-oxidase; sub 96.3 0.0026 8.9E-08 67.0 4.4 47 243-289 273-326 (623)
160 2cul_A Glucose-inhibited divis 96.3 0.0023 8E-08 58.3 3.5 55 231-287 69-125 (232)
161 1onf_A GR, grase, glutathione 96.2 0.0023 7.7E-08 65.7 3.6 57 230-287 217-275 (500)
162 2wpf_A Trypanothione reductase 96.2 0.002 6.9E-08 66.0 3.1 57 230-287 235-292 (495)
163 1gte_A Dihydropyrimidine dehyd 96.2 0.0028 9.5E-08 70.9 4.4 34 1-34 194-228 (1025)
164 3g5s_A Methylenetetrahydrofola 96.2 0.0036 1.2E-07 60.8 4.4 34 1-34 8-41 (443)
165 2gag_A Heterotetrameric sarcos 96.1 0.0031 1.1E-07 70.0 4.4 34 1-34 135-168 (965)
166 1ps9_A 2,4-dienoyl-COA reducta 96.1 0.003 1E-07 67.3 3.9 34 1-34 380-413 (671)
167 1y56_A Hypothetical protein PH 96.0 0.003 1E-07 64.6 3.3 47 238-286 265-312 (493)
168 2ywl_A Thioredoxin reductase r 96.0 0.0046 1.6E-07 53.6 4.0 53 231-287 57-110 (180)
169 2aqj_A Tryptophan halogenase, 96.0 0.0043 1.5E-07 64.3 4.3 57 230-287 165-222 (538)
170 1fl2_A Alkyl hydroperoxide red 95.9 0.0045 1.6E-07 58.9 3.9 31 1-33 8-38 (310)
171 3oc4_A Oxidoreductase, pyridin 95.9 0.0044 1.5E-07 62.7 3.8 56 229-287 188-244 (452)
172 3s5w_A L-ornithine 5-monooxyge 95.7 0.0046 1.6E-07 62.7 3.3 30 1-30 37-71 (463)
173 2dkh_A 3-hydroxybenzoate hydro 95.7 0.0049 1.7E-07 65.3 3.5 65 230-294 141-218 (639)
174 2weu_A Tryptophan 5-halogenase 95.7 0.0038 1.3E-07 64.2 2.6 57 230-287 173-230 (511)
175 3iwa_A FAD-dependent pyridine 95.7 0.0049 1.7E-07 62.7 3.2 56 229-286 201-257 (472)
176 1lqt_A FPRA; NADP+ derivative, 95.7 0.0047 1.6E-07 62.4 3.0 34 1-34 10-50 (456)
177 2e1m_B L-glutamate oxidase; L- 95.6 0.014 4.6E-07 47.3 5.0 52 272-325 4-55 (130)
178 1cjc_A Protein (adrenodoxin re 95.6 0.0066 2.2E-07 61.4 3.9 34 1-34 13-48 (460)
179 2pyx_A Tryptophan halogenase; 95.6 0.0061 2.1E-07 63.0 3.7 58 230-288 175-234 (526)
180 2e4g_A Tryptophan halogenase; 95.6 0.007 2.4E-07 62.8 4.1 57 230-287 194-252 (550)
181 3h28_A Sulfide-quinone reducta 95.6 0.0052 1.8E-07 61.7 3.0 51 229-284 199-253 (430)
182 3gyx_A Adenylylsulfate reducta 95.6 0.0071 2.4E-07 64.0 4.0 56 231-287 167-233 (662)
183 3cp8_A TRNA uridine 5-carboxym 95.6 0.007 2.4E-07 63.1 3.8 56 230-287 117-174 (641)
184 2x8g_A Thioredoxin glutathione 95.5 0.0074 2.5E-07 63.4 3.8 58 230-287 326-395 (598)
185 4b1b_A TRXR, thioredoxin reduc 95.5 0.0068 2.3E-07 62.5 3.5 60 226-287 259-319 (542)
186 1hyu_A AHPF, alkyl hydroperoxi 95.5 0.0087 3E-07 61.7 4.2 49 238-286 275-325 (521)
187 3kd9_A Coenzyme A disulfide re 95.4 0.0087 3E-07 60.4 3.9 54 230-286 190-243 (449)
188 3h8l_A NADH oxidase; membrane 95.4 0.0054 1.8E-07 61.1 2.3 51 230-286 218-269 (409)
189 3q9t_A Choline dehydrogenase a 95.4 0.01 3.4E-07 61.7 4.3 46 242-288 218-271 (577)
190 3ics_A Coenzyme A-disulfide re 95.3 0.0089 3E-07 62.6 3.8 54 229-286 227-281 (588)
191 1pn0_A Phenol 2-monooxygenase; 95.3 0.012 4E-07 62.6 4.4 29 1-29 15-48 (665)
192 2cdu_A NADPH oxidase; flavoenz 95.2 0.011 3.8E-07 59.7 3.9 58 229-287 190-247 (452)
193 2cul_A Glucose-inhibited divis 95.1 0.032 1.1E-06 50.5 6.3 27 1-27 10-36 (232)
194 1nhp_A NADH peroxidase; oxidor 95.0 0.012 4.3E-07 59.2 3.7 56 230-287 191-246 (447)
195 3ntd_A FAD-dependent pyridine 95.0 0.013 4.6E-07 60.9 3.8 56 230-286 192-266 (565)
196 3ef6_A Toluene 1,2-dioxygenase 94.9 0.017 5.7E-07 57.5 4.3 55 230-286 185-240 (410)
197 1kdg_A CDH, cellobiose dehydro 94.9 0.017 5.9E-07 59.8 4.4 55 233-288 198-262 (546)
198 3cgb_A Pyridine nucleotide-dis 94.9 0.016 5.5E-07 59.0 4.0 56 230-287 227-282 (480)
199 1q1r_A Putidaredoxin reductase 94.9 0.058 2E-06 54.0 8.1 56 230-286 191-249 (431)
200 3iwa_A FAD-dependent pyridine 94.8 0.069 2.3E-06 54.1 8.6 30 1-30 10-41 (472)
201 1xhc_A NADH oxidase /nitrite r 94.8 0.014 4.9E-07 57.0 3.3 50 230-286 183-233 (367)
202 3qvp_A Glucose oxidase; oxidor 94.8 0.018 6.3E-07 59.7 4.1 48 240-288 237-294 (583)
203 2cdu_A NADPH oxidase; flavoenz 94.7 0.063 2.2E-06 54.1 7.8 31 1-31 7-39 (452)
204 2ywl_A Thioredoxin reductase r 94.6 0.081 2.8E-06 45.5 7.3 27 1-27 8-34 (180)
205 2weu_A Tryptophan 5-halogenase 94.6 0.083 2.8E-06 54.1 8.6 28 1-28 9-39 (511)
206 2e4g_A Tryptophan halogenase; 94.6 0.07 2.4E-06 55.2 8.0 28 1-28 32-62 (550)
207 2wpf_A Trypanothione reductase 94.5 0.081 2.8E-06 54.0 8.3 34 1-34 14-56 (495)
208 3ef6_A Toluene 1,2-dioxygenase 94.5 0.059 2E-06 53.5 7.1 31 1-31 9-41 (410)
209 1fec_A Trypanothione reductase 94.5 0.079 2.7E-06 54.0 8.0 34 1-34 10-52 (490)
210 1trb_A Thioredoxin reductase; 94.4 0.12 4E-06 49.1 8.8 33 1-34 12-44 (320)
211 2gqw_A Ferredoxin reductase; f 94.3 0.027 9.3E-07 55.9 4.0 51 230-286 187-238 (408)
212 1q1r_A Putidaredoxin reductase 94.3 0.03 1E-06 56.1 4.3 30 1-30 11-42 (431)
213 2bc0_A NADH oxidase; flavoprot 94.3 0.02 6.9E-07 58.4 3.2 56 230-287 236-291 (490)
214 3sx6_A Sulfide-quinone reducta 94.3 0.023 7.8E-07 57.1 3.4 51 230-284 208-266 (437)
215 1ju2_A HydroxynitrIle lyase; f 94.2 0.018 6.3E-07 59.4 2.6 53 236-288 200-262 (536)
216 1mo9_A ORF3; nucleotide bindin 94.2 0.094 3.2E-06 53.9 8.0 34 1-34 50-83 (523)
217 3klj_A NAD(FAD)-dependent dehy 94.2 0.026 9E-07 55.5 3.6 44 230-287 188-231 (385)
218 4eqs_A Coenzyme A disulfide re 94.1 0.03 1E-06 56.2 4.0 52 230-287 188-240 (437)
219 3o0h_A Glutathione reductase; 94.1 0.09 3.1E-06 53.4 7.6 33 1-34 33-65 (484)
220 3c4n_A Uncharacterized protein 94.0 0.031 1.1E-06 55.4 3.9 32 1-32 43-76 (405)
221 1xdi_A RV3303C-LPDA; reductase 94.0 0.11 3.7E-06 53.1 7.9 33 1-34 9-44 (499)
222 2hqm_A GR, grase, glutathione 93.9 0.12 4E-06 52.5 8.0 33 1-34 18-50 (479)
223 3oc4_A Oxidoreductase, pyridin 93.8 0.12 4.2E-06 51.9 7.9 30 1-30 9-40 (452)
224 1ges_A Glutathione reductase; 93.8 0.12 4E-06 52.0 7.7 33 1-34 11-43 (450)
225 1m6i_A Programmed cell death p 93.8 0.036 1.2E-06 56.6 3.8 55 230-286 226-281 (493)
226 2aqj_A Tryptophan halogenase, 93.6 0.14 4.7E-06 52.8 8.0 29 1-29 12-43 (538)
227 2v3a_A Rubredoxin reductase; a 93.6 0.13 4.3E-06 50.6 7.2 56 230-287 187-243 (384)
228 2v3a_A Rubredoxin reductase; a 93.5 0.042 1.4E-06 54.0 3.7 27 1-27 11-39 (384)
229 1rp0_A ARA6, thiazole biosynth 93.5 0.15 5E-06 47.7 7.3 33 1-33 46-79 (284)
230 1m6i_A Programmed cell death p 93.5 0.12 4.2E-06 52.6 7.1 30 1-30 18-49 (493)
231 3vrd_B FCCB subunit, flavocyto 93.5 0.042 1.4E-06 54.3 3.6 48 236-285 208-256 (401)
232 1onf_A GR, grase, glutathione 93.2 0.19 6.4E-06 51.3 8.1 33 1-34 9-41 (500)
233 2pyx_A Tryptophan halogenase; 93.1 0.24 8.1E-06 50.9 8.7 28 1-28 14-53 (526)
234 3hyw_A Sulfide-quinone reducta 93.0 0.047 1.6E-06 54.6 3.2 53 229-285 199-254 (430)
235 1coy_A Cholesterol oxidase; ox 92.8 0.071 2.4E-06 54.6 4.2 58 231-288 227-294 (507)
236 2yqu_A 2-oxoglutarate dehydrog 92.8 0.17 5.9E-06 50.8 7.0 34 1-34 8-41 (455)
237 3itj_A Thioredoxin reductase 1 92.6 0.23 7.8E-06 47.4 7.4 53 234-287 212-271 (338)
238 3fim_B ARYL-alcohol oxidase; A 92.6 0.062 2.1E-06 55.7 3.4 53 240-293 218-281 (566)
239 2bc0_A NADH oxidase; flavoprot 92.6 0.23 7.9E-06 50.5 7.6 30 1-30 42-74 (490)
240 4a9w_A Monooxygenase; baeyer-v 92.4 0.21 7.2E-06 47.9 6.9 33 1-33 10-42 (357)
241 2r9z_A Glutathione amide reduc 92.3 0.25 8.6E-06 49.8 7.5 33 1-34 11-43 (463)
242 2gqw_A Ferredoxin reductase; f 92.1 0.31 1.1E-05 48.2 7.8 30 1-30 14-45 (408)
243 3kkj_A Amine oxidase, flavin-c 92.0 0.047 1.6E-06 50.3 1.5 37 485-522 290-328 (336)
244 4dna_A Probable glutathione re 91.9 0.38 1.3E-05 48.4 8.3 33 1-34 12-44 (463)
245 1gpe_A Protein (glucose oxidas 91.9 0.099 3.4E-06 54.5 4.0 49 240-288 241-298 (587)
246 2jbv_A Choline oxidase; alcoho 91.9 0.093 3.2E-06 54.2 3.7 56 233-288 211-274 (546)
247 3cty_A Thioredoxin reductase; 91.6 0.36 1.2E-05 45.7 7.3 53 234-287 194-252 (319)
248 1coy_A Cholesterol oxidase; ox 91.6 0.12 4.2E-06 52.7 4.2 28 1-28 18-45 (507)
249 3nlc_A Uncharacterized protein 91.5 0.084 2.9E-06 54.3 2.9 33 1-33 114-146 (549)
250 1zk7_A HGII, reductase, mercur 91.3 0.5 1.7E-05 47.6 8.5 33 1-34 11-43 (467)
251 3cgb_A Pyridine nucleotide-dis 91.2 0.62 2.1E-05 47.1 9.0 31 1-31 43-75 (480)
252 3lad_A Dihydrolipoamide dehydr 91.0 0.66 2.2E-05 46.8 9.0 33 1-33 10-42 (476)
253 1zmd_A Dihydrolipoyl dehydroge 91.0 0.59 2E-05 47.2 8.6 34 1-34 13-46 (474)
254 2qae_A Lipoamide, dihydrolipoy 90.9 0.64 2.2E-05 46.8 8.7 34 1-34 9-42 (468)
255 3ab1_A Ferredoxin--NADP reduct 90.9 0.46 1.6E-05 45.9 7.4 55 231-286 75-130 (360)
256 3dgh_A TRXR-1, thioredoxin red 90.9 0.45 1.5E-05 48.2 7.6 25 1-25 16-40 (483)
257 2zbw_A Thioredoxin reductase; 90.7 0.7 2.4E-05 43.9 8.5 56 230-287 191-252 (335)
258 1nhp_A NADH peroxidase; oxidor 90.7 0.45 1.6E-05 47.6 7.4 30 1-30 7-38 (447)
259 3ntd_A FAD-dependent pyridine 90.7 0.52 1.8E-05 48.7 8.1 30 1-30 8-39 (565)
260 1v59_A Dihydrolipoamide dehydr 90.6 0.52 1.8E-05 47.6 7.8 34 1-34 12-45 (478)
261 3r9u_A Thioredoxin reductase; 90.5 0.36 1.2E-05 45.4 6.1 49 238-287 191-244 (315)
262 3ics_A Coenzyme A-disulfide re 90.1 0.45 1.6E-05 49.5 7.0 30 1-30 43-74 (588)
263 2eq6_A Pyruvate dehydrogenase 90.1 0.66 2.3E-05 46.7 8.0 33 1-34 13-45 (464)
264 2a8x_A Dihydrolipoyl dehydroge 90.0 0.76 2.6E-05 46.2 8.4 33 1-34 10-42 (464)
265 3lzw_A Ferredoxin--NADP reduct 89.8 0.51 1.8E-05 44.7 6.6 55 229-285 66-121 (332)
266 3h8l_A NADH oxidase; membrane 89.6 0.36 1.2E-05 47.7 5.5 31 1-31 8-41 (409)
267 1ebd_A E3BD, dihydrolipoamide 89.5 0.64 2.2E-05 46.6 7.3 33 1-34 10-42 (455)
268 3cp8_A TRNA uridine 5-carboxym 89.5 0.41 1.4E-05 49.9 5.8 31 1-31 28-59 (641)
269 1ojt_A Surface protein; redox- 88.9 0.42 1.4E-05 48.4 5.5 34 1-34 13-46 (482)
270 1kdg_A CDH, cellobiose dehydro 88.8 0.55 1.9E-05 48.4 6.4 29 1-29 14-42 (546)
271 3d1c_A Flavin-containing putat 88.4 0.82 2.8E-05 44.1 7.1 32 1-33 11-43 (369)
272 1fl2_A Alkyl hydroperoxide red 88.4 0.92 3.2E-05 42.5 7.2 51 235-286 184-241 (310)
273 1dxl_A Dihydrolipoamide dehydr 88.4 0.91 3.1E-05 45.7 7.6 34 1-34 13-46 (470)
274 4b1b_A TRXR, thioredoxin reduc 88.3 0.91 3.1E-05 46.6 7.5 33 1-33 49-89 (542)
275 3dgz_A Thioredoxin reductase 2 88.0 1.3 4.4E-05 44.8 8.5 34 1-34 13-54 (488)
276 3dk9_A Grase, GR, glutathione 88.0 1.2 4E-05 45.0 8.1 33 1-34 27-59 (478)
277 3urh_A Dihydrolipoyl dehydroge 87.7 1.2 4E-05 45.2 7.9 34 1-34 32-65 (491)
278 1y56_A Hypothetical protein PH 87.5 0.63 2.2E-05 47.2 5.8 33 1-34 115-147 (493)
279 2dkh_A 3-hydroxybenzoate hydro 87.4 0.98 3.4E-05 47.5 7.3 30 1-30 39-69 (639)
280 3c96_A Flavin-containing monoo 87.0 0.91 3.1E-05 44.7 6.5 31 1-31 11-42 (410)
281 3k30_A Histamine dehydrogenase 86.9 0.42 1.4E-05 50.9 4.1 54 232-286 569-623 (690)
282 2bry_A NEDD9 interacting prote 86.5 0.69 2.4E-05 47.0 5.3 32 1-32 99-130 (497)
283 2xdo_A TETX2 protein; tetracyc 86.4 0.33 1.1E-05 47.7 2.9 31 1-31 33-63 (398)
284 3f8d_A Thioredoxin reductase ( 86.4 1.2 4E-05 41.9 6.7 55 229-286 69-124 (323)
285 2q0l_A TRXR, thioredoxin reduc 86.3 1.3 4.4E-05 41.5 6.9 50 236-286 184-240 (311)
286 3gyx_A Adenylylsulfate reducta 86.2 0.81 2.8E-05 48.2 5.8 30 1-30 29-64 (662)
287 2xve_A Flavin-containing monoo 85.9 1.4 4.8E-05 44.2 7.3 35 1-35 9-49 (464)
288 3klj_A NAD(FAD)-dependent dehy 85.8 0.55 1.9E-05 45.9 4.1 32 1-32 153-184 (385)
289 2gjc_A Thiazole biosynthetic e 85.8 2.9 0.0001 39.6 8.9 40 229-268 145-190 (326)
290 3h28_A Sulfide-quinone reducta 85.8 0.69 2.3E-05 46.0 4.8 32 1-32 9-42 (430)
291 2jbv_A Choline oxidase; alcoho 85.6 0.58 2E-05 48.2 4.3 29 1-29 20-49 (546)
292 3ic9_A Dihydrolipoamide dehydr 85.2 2.2 7.5E-05 43.2 8.3 33 1-34 15-47 (492)
293 1w4x_A Phenylacetone monooxyge 85.1 1.4 4.9E-05 45.2 7.0 58 230-287 94-154 (542)
294 1lvl_A Dihydrolipoamide dehydr 84.9 1.1 3.6E-05 45.1 5.8 33 1-34 12-44 (458)
295 2q7v_A Thioredoxin reductase; 84.5 2.2 7.6E-05 40.2 7.7 56 230-287 65-123 (325)
296 3jsk_A Cypbp37 protein; octame 84.3 2.3 7.9E-05 40.6 7.5 59 229-287 159-251 (344)
297 4eqs_A Coenzyme A disulfide re 84.2 0.93 3.2E-05 45.2 5.0 30 1-30 7-38 (437)
298 3lk7_A UDP-N-acetylmuramoylala 84.0 0.68 2.3E-05 46.4 3.8 27 1-27 16-42 (451)
299 1vdc_A NTR, NADPH dependent th 83.9 1.8 6.2E-05 40.9 6.8 55 230-287 70-124 (333)
300 2gv8_A Monooxygenase; FMO, FAD 83.6 1.3 4.3E-05 44.3 5.7 56 230-287 115-177 (447)
301 3kd9_A Coenzyme A disulfide re 83.3 2.2 7.6E-05 42.5 7.3 32 1-32 10-43 (449)
302 4b63_A L-ornithine N5 monooxyg 83.2 0.29 1E-05 49.9 0.8 33 1-33 46-78 (501)
303 1hyu_A AHPF, alkyl hydroperoxi 82.9 2 6.8E-05 43.9 6.9 38 484-521 475-515 (521)
304 3llv_A Exopolyphosphatase-rela 82.9 1 3.4E-05 36.7 3.8 27 1-27 13-39 (141)
305 2g1u_A Hypothetical protein TM 82.8 0.89 3E-05 37.8 3.5 28 1-28 26-53 (155)
306 4gcm_A TRXR, thioredoxin reduc 82.6 0.73 2.5E-05 43.4 3.3 29 1-29 152-180 (312)
307 1lss_A TRK system potassium up 82.2 1 3.6E-05 36.3 3.7 27 1-27 11-37 (140)
308 1xhc_A NADH oxidase /nitrite r 82.1 0.93 3.2E-05 44.0 3.9 31 1-31 150-180 (367)
309 2x5o_A UDP-N-acetylmuramoylala 81.8 0.72 2.5E-05 46.0 3.0 31 1-31 12-42 (439)
310 4hb9_A Similarities with proba 81.5 2 6.7E-05 42.0 6.1 29 1-29 8-36 (412)
311 3fwz_A Inner membrane protein 81.5 1.2 4.2E-05 36.2 3.8 28 1-28 14-41 (140)
312 2r0c_A REBC; flavin adenine di 80.2 2.7 9.2E-05 43.2 6.8 31 1-31 33-63 (549)
313 3s5w_A L-ornithine 5-monooxyge 79.5 3.8 0.00013 40.9 7.5 43 243-287 329-377 (463)
314 3vrd_B FCCB subunit, flavocyto 78.9 0.9 3.1E-05 44.5 2.6 28 1-28 9-38 (401)
315 4a7p_A UDP-glucose dehydrogena 78.7 1.5 5E-05 43.8 4.0 28 1-28 15-42 (446)
316 2a87_A TRXR, TR, thioredoxin r 78.3 3.8 0.00013 38.8 6.8 53 230-286 71-125 (335)
317 3hyw_A Sulfide-quinone reducta 78.0 2.1 7.3E-05 42.4 5.0 28 1-28 9-38 (430)
318 3qvp_A Glucose oxidase; oxidor 77.9 2.1 7.1E-05 44.3 5.0 27 1-27 26-53 (583)
319 3ic5_A Putative saccharopine d 77.8 1.5 5.2E-05 34.0 3.2 27 1-27 12-39 (118)
320 4a5l_A Thioredoxin reductase; 77.8 1.3 4.4E-05 41.5 3.2 28 1-28 159-186 (314)
321 3ojo_A CAP5O; rossmann fold, c 77.7 1.5 5.1E-05 43.4 3.7 28 1-28 18-45 (431)
322 1ju2_A HydroxynitrIle lyase; f 77.7 1.3 4.3E-05 45.5 3.3 29 1-30 33-61 (536)
323 3eag_A UDP-N-acetylmuramate:L- 77.0 1.8 6.1E-05 41.2 4.0 28 1-28 11-39 (326)
324 1cjc_A Protein (adrenodoxin re 76.5 4.4 0.00015 40.5 6.9 45 243-287 270-333 (460)
325 3fim_B ARYL-alcohol oxidase; A 76.2 1.3 4.6E-05 45.6 3.0 29 1-29 9-38 (566)
326 3sx6_A Sulfide-quinone reducta 76.1 2.6 8.9E-05 41.8 5.1 28 1-28 11-41 (437)
327 1id1_A Putative potassium chan 75.4 2.5 8.4E-05 34.9 4.0 27 1-27 10-36 (153)
328 2hmt_A YUAA protein; RCK, KTN, 74.8 2 6.9E-05 34.7 3.3 27 1-27 13-39 (144)
329 3q9t_A Choline dehydrogenase a 74.7 2.6 8.9E-05 43.5 4.7 28 1-28 13-41 (577)
330 1f0y_A HCDH, L-3-hydroxyacyl-C 74.6 2.1 7.3E-05 40.1 3.8 27 1-27 22-48 (302)
331 2y0c_A BCEC, UDP-glucose dehyd 74.4 2 7E-05 43.2 3.8 27 1-27 15-41 (478)
332 3ado_A Lambda-crystallin; L-gu 74.4 2.3 7.9E-05 40.1 3.9 27 1-27 13-39 (319)
333 4fk1_A Putative thioredoxin re 74.3 5.5 0.00019 37.1 6.6 57 230-287 60-117 (304)
334 3c85_A Putative glutathione-re 74.3 2.2 7.4E-05 36.5 3.4 27 1-27 46-73 (183)
335 2dpo_A L-gulonate 3-dehydrogen 74.1 2.3 8E-05 40.2 3.9 27 1-27 13-39 (319)
336 4e12_A Diketoreductase; oxidor 73.9 2.3 7.9E-05 39.4 3.8 27 1-27 11-37 (283)
337 3qfa_A Thioredoxin reductase 1 73.3 8.1 0.00028 39.3 8.0 34 1-34 39-80 (519)
338 3fbs_A Oxidoreductase; structu 72.5 5 0.00017 36.9 5.8 56 229-287 55-112 (297)
339 3pl8_A Pyranose 2-oxidase; sub 71.7 3.8 0.00013 42.8 5.1 33 1-33 53-85 (623)
340 2gag_A Heterotetrameric sarcos 71.4 5.3 0.00018 44.1 6.5 49 237-286 323-382 (965)
341 1ks9_A KPA reductase;, 2-dehyd 71.2 3.2 0.00011 38.3 4.1 28 1-28 7-34 (291)
342 3fpz_A Thiazole biosynthetic e 70.9 1.2 4.1E-05 42.3 1.1 39 484-522 278-325 (326)
343 2raf_A Putative dinucleotide-b 70.8 3.5 0.00012 36.2 4.1 28 1-28 26-53 (209)
344 3g79_A NDP-N-acetyl-D-galactos 70.8 3.1 0.0001 41.8 4.0 28 1-28 25-54 (478)
345 3hn2_A 2-dehydropantoate 2-red 70.5 3.2 0.00011 39.0 3.9 27 1-27 9-35 (312)
346 3gg2_A Sugar dehydrogenase, UD 70.3 2.9 0.0001 41.7 3.8 27 1-27 9-35 (450)
347 3lxd_A FAD-dependent pyridine 69.9 3.3 0.00011 40.7 4.1 31 1-31 159-189 (415)
348 3i83_A 2-dehydropantoate 2-red 69.9 3.2 0.00011 39.2 3.8 27 1-27 9-35 (320)
349 3fg2_P Putative rubredoxin red 69.9 3.6 0.00012 40.2 4.3 31 1-31 149-179 (404)
350 2x8g_A Thioredoxin glutathione 68.0 9.3 0.00032 39.6 7.2 26 1-26 114-139 (598)
351 3k6j_A Protein F01G10.3, confi 67.3 3.8 0.00013 40.8 3.8 28 1-28 61-88 (460)
352 1mv8_A GMD, GDP-mannose 6-dehy 67.3 3.6 0.00012 40.8 3.7 27 1-27 7-33 (436)
353 3g3e_A D-amino-acid oxidase; F 66.9 1.4 4.7E-05 42.3 0.5 32 1-32 7-44 (351)
354 2ew2_A 2-dehydropantoate 2-red 66.3 4.1 0.00014 38.1 3.8 27 1-27 10-36 (316)
355 3vtf_A UDP-glucose 6-dehydroge 66.2 3.7 0.00013 40.7 3.4 27 1-27 28-54 (444)
356 3l4b_C TRKA K+ channel protien 66.0 3.8 0.00013 36.1 3.2 28 1-28 7-34 (218)
357 1gpe_A Protein (glucose oxidas 65.8 4.4 0.00015 42.0 4.1 29 1-29 31-60 (587)
358 3l8k_A Dihydrolipoyl dehydroge 65.6 4.5 0.00015 40.5 4.1 30 1-30 179-208 (466)
359 1zej_A HBD-9, 3-hydroxyacyl-CO 65.4 4.3 0.00015 37.8 3.6 26 1-27 19-44 (293)
360 1zcj_A Peroxisomal bifunctiona 64.9 4 0.00014 40.9 3.5 27 1-27 44-70 (463)
361 1lqt_A FPRA; NADP+ derivative, 64.4 7.1 0.00024 38.9 5.2 53 233-287 249-326 (456)
362 1z82_A Glycerol-3-phosphate de 63.5 5 0.00017 38.1 3.8 26 1-26 21-46 (335)
363 4dio_A NAD(P) transhydrogenase 63.5 5.3 0.00018 38.9 3.9 28 1-28 197-224 (405)
364 3doj_A AT3G25530, dehydrogenas 63.4 4.8 0.00017 37.7 3.6 28 1-28 28-55 (310)
365 3pef_A 6-phosphogluconate dehy 63.1 5 0.00017 37.1 3.6 28 1-28 8-35 (287)
366 3pdu_A 3-hydroxyisobutyrate de 63.1 4.5 0.00015 37.4 3.3 28 1-28 8-35 (287)
367 3ghy_A Ketopantoate reductase 62.9 5.1 0.00017 38.1 3.7 26 1-26 10-35 (335)
368 3dtt_A NADP oxidoreductase; st 62.9 5.4 0.00019 35.9 3.7 27 1-27 26-52 (245)
369 3qha_A Putative oxidoreductase 62.5 4.4 0.00015 37.7 3.1 28 1-28 22-49 (296)
370 1ps9_A 2,4-dienoyl-COA reducta 62.3 14 0.00048 38.9 7.3 50 234-287 577-628 (671)
371 3g17_A Similar to 2-dehydropan 62.1 4.4 0.00015 37.7 3.1 27 1-27 9-35 (294)
372 3mog_A Probable 3-hydroxybutyr 61.6 5.7 0.00019 39.9 3.9 27 1-27 12-38 (483)
373 3g0o_A 3-hydroxyisobutyrate de 61.2 5.9 0.0002 37.0 3.8 27 1-27 14-40 (303)
374 2a9f_A Putative malic enzyme ( 61.1 5.2 0.00018 38.6 3.3 27 1-27 195-222 (398)
375 3uox_A Otemo; baeyer-villiger 59.8 6.5 0.00022 40.2 4.1 34 1-34 16-49 (545)
376 3k96_A Glycerol-3-phosphate de 59.8 6 0.00021 38.0 3.6 27 1-27 36-62 (356)
377 3pid_A UDP-glucose 6-dehydroge 59.6 5.5 0.00019 39.3 3.3 26 1-27 43-68 (432)
378 1gte_A Dihydropyrimidine dehyd 58.9 18 0.00063 40.1 7.8 47 238-285 378-440 (1025)
379 3hwr_A 2-dehydropantoate 2-red 58.7 6.7 0.00023 36.9 3.7 26 1-27 26-51 (318)
380 1bg6_A N-(1-D-carboxylethyl)-L 58.6 6.7 0.00023 37.4 3.8 27 1-27 11-37 (359)
381 1txg_A Glycerol-3-phosphate de 58.4 5.7 0.00019 37.6 3.2 25 1-25 7-31 (335)
382 4dll_A 2-hydroxy-3-oxopropiona 58.1 7 0.00024 36.8 3.7 27 1-27 38-64 (320)
383 3p2y_A Alanine dehydrogenase/p 58.0 6 0.00021 38.2 3.2 27 1-27 191-217 (381)
384 1o94_A Tmadh, trimethylamine d 56.8 6.6 0.00023 41.9 3.6 49 234-286 575-645 (729)
385 1pn0_A Phenol 2-monooxygenase; 56.6 16 0.00056 38.3 6.6 64 230-294 119-237 (665)
386 2h78_A Hibadh, 3-hydroxyisobut 56.6 7.8 0.00027 36.0 3.7 27 1-27 10-36 (302)
387 1jay_A Coenzyme F420H2:NADP+ o 56.5 7.4 0.00025 33.9 3.4 27 1-27 8-34 (212)
388 1dlj_A UDP-glucose dehydrogena 56.2 5.7 0.0002 38.9 2.8 26 1-27 7-32 (402)
389 1lld_A L-lactate dehydrogenase 55.8 8.2 0.00028 36.2 3.8 27 1-27 14-42 (319)
390 2hjr_A Malate dehydrogenase; m 55.6 8.8 0.0003 36.3 3.9 27 1-27 21-48 (328)
391 3l6d_A Putative oxidoreductase 55.5 8.9 0.0003 35.8 3.9 27 1-27 16-42 (306)
392 4b63_A L-ornithine N5 monooxyg 55.4 18 0.00063 36.4 6.5 56 230-285 145-212 (501)
393 3gwf_A Cyclohexanone monooxyge 55.4 6.8 0.00023 40.0 3.3 44 238-287 338-384 (540)
394 1nyt_A Shikimate 5-dehydrogena 55.3 8.8 0.0003 35.1 3.8 27 1-27 126-152 (271)
395 2vns_A Metalloreductase steap3 55.1 9.6 0.00033 33.4 3.9 27 1-27 35-61 (215)
396 1pzg_A LDH, lactate dehydrogen 54.9 8.1 0.00028 36.6 3.5 27 1-27 16-43 (331)
397 4gbj_A 6-phosphogluconate dehy 54.8 6.9 0.00024 36.4 3.0 28 1-28 12-39 (297)
398 2wtb_A MFP2, fatty acid multif 54.6 7.6 0.00026 41.3 3.6 27 1-27 319-345 (725)
399 2ewd_A Lactate dehydrogenase,; 54.5 8.2 0.00028 36.3 3.5 27 1-27 11-38 (317)
400 3d3k_A Enhancer of mRNA-decapp 54.2 8.9 0.0003 34.9 3.5 18 6-23 101-118 (259)
401 1vl6_A Malate oxidoreductase; 54.0 8.1 0.00028 37.2 3.3 26 1-26 199-225 (388)
402 4ap3_A Steroid monooxygenase; 53.8 8 0.00027 39.6 3.5 28 1-28 198-225 (549)
403 4ezb_A Uncharacterized conserv 53.3 7.9 0.00027 36.4 3.2 27 1-27 31-58 (317)
404 2pv7_A T-protein [includes: ch 53.2 9.5 0.00032 35.5 3.7 27 1-27 29-55 (298)
405 1evy_A Glycerol-3-phosphate de 52.5 5.4 0.00019 38.4 1.9 27 1-27 22-48 (366)
406 2o3j_A UDP-glucose 6-dehydroge 52.4 8.2 0.00028 38.8 3.3 27 1-27 16-44 (481)
407 1x13_A NAD(P) transhydrogenase 52.4 9.3 0.00032 37.3 3.6 27 1-27 179-205 (401)
408 4e21_A 6-phosphogluconate dehy 51.9 10 0.00035 36.3 3.8 27 1-27 29-55 (358)
409 3ego_A Probable 2-dehydropanto 51.9 9.8 0.00034 35.6 3.6 26 1-27 9-34 (307)
410 2v6b_A L-LDH, L-lactate dehydr 51.3 11 0.00038 35.2 3.8 27 1-27 7-35 (304)
411 3d3j_A Enhancer of mRNA-decapp 51.3 10 0.00035 35.4 3.5 18 6-23 148-165 (306)
412 1jzt_A Hypothetical 27.5 kDa p 51.2 9.2 0.00031 34.5 3.1 19 6-24 74-92 (246)
413 3qsg_A NAD-binding phosphogluc 51.0 9.7 0.00033 35.7 3.4 27 1-27 31-58 (312)
414 4hv4_A UDP-N-acetylmuramate--L 50.9 9.2 0.00032 38.5 3.4 27 1-27 29-56 (494)
415 2p4q_A 6-phosphogluconate dehy 50.7 11 0.00039 37.9 4.0 27 1-27 17-43 (497)
416 1pjc_A Protein (L-alanine dehy 50.7 11 0.00037 36.3 3.7 27 1-27 174-200 (361)
417 1l7d_A Nicotinamide nucleotide 50.6 11 0.00038 36.5 3.9 28 1-28 179-206 (384)
418 2eez_A Alanine dehydrogenase; 50.6 11 0.00037 36.4 3.7 27 1-27 173-199 (369)
419 1wdk_A Fatty oxidation complex 50.6 8.9 0.0003 40.7 3.3 27 1-27 321-347 (715)
420 2dtx_A Glucose 1-dehydrogenase 50.5 17 0.00057 33.0 4.9 32 1-32 16-47 (264)
421 2gf2_A Hibadh, 3-hydroxyisobut 50.5 12 0.00042 34.5 4.0 27 1-27 7-33 (296)
422 1c0p_A D-amino acid oxidase; a 50.5 7.5 0.00026 37.1 2.6 31 1-31 13-43 (363)
423 4ffl_A PYLC; amino acid, biosy 50.3 11 0.00039 36.0 3.8 28 1-28 8-35 (363)
424 3gem_A Short chain dehydrogena 50.2 13 0.00044 33.7 4.0 28 1-28 35-62 (260)
425 2q3e_A UDP-glucose 6-dehydroge 50.0 9.4 0.00032 38.2 3.3 27 1-27 12-40 (467)
426 2uyy_A N-PAC protein; long-cha 49.5 12 0.0004 35.0 3.7 27 1-27 37-63 (316)
427 1j6u_A UDP-N-acetylmuramate-al 49.4 7.6 0.00026 38.9 2.5 26 1-28 22-47 (469)
428 1fjh_A 3alpha-hydroxysteroid d 49.1 13 0.00043 33.4 3.8 28 1-28 9-36 (257)
429 3orf_A Dihydropteridine reduct 49.0 13 0.00045 33.3 3.9 28 1-28 30-57 (251)
430 3c24_A Putative oxidoreductase 49.0 12 0.00042 34.4 3.7 27 1-27 18-45 (286)
431 4gwg_A 6-phosphogluconate dehy 48.8 13 0.00045 37.2 4.0 27 1-27 11-37 (484)
432 3oj0_A Glutr, glutamyl-tRNA re 48.3 4.7 0.00016 32.8 0.6 27 1-27 28-54 (144)
433 1yqg_A Pyrroline-5-carboxylate 48.2 12 0.00041 33.9 3.4 27 1-27 7-34 (263)
434 1yj8_A Glycerol-3-phosphate de 48.2 10 0.00035 36.6 3.1 28 1-28 28-62 (375)
435 1guz_A Malate dehydrogenase; o 48.0 14 0.00046 34.6 3.9 27 1-27 7-35 (310)
436 2ew8_A (S)-1-phenylethanol deh 47.7 14 0.00048 33.0 3.9 27 1-27 15-41 (249)
437 3dii_A Short-chain dehydrogena 47.4 14 0.00047 33.1 3.7 27 1-27 10-36 (247)
438 1dhr_A Dihydropteridine reduct 47.3 13 0.00045 33.0 3.5 28 1-28 15-42 (241)
439 2f1k_A Prephenate dehydrogenas 47.2 14 0.00048 33.8 3.8 27 1-27 7-33 (279)
440 2ekp_A 2-deoxy-D-gluconate 3-d 47.1 15 0.0005 32.6 3.9 27 1-27 10-36 (239)
441 3tpc_A Short chain alcohol deh 47.0 15 0.0005 33.1 3.9 28 1-28 15-42 (257)
442 4huj_A Uncharacterized protein 46.8 8.5 0.00029 33.9 2.1 27 1-27 30-57 (220)
443 3guy_A Short-chain dehydrogena 46.8 15 0.00051 32.3 3.8 27 1-27 9-35 (230)
444 3tzq_B Short-chain type dehydr 46.8 14 0.0005 33.5 3.8 28 1-28 19-46 (271)
445 1o5i_A 3-oxoacyl-(acyl carrier 46.7 14 0.00049 33.0 3.7 27 1-27 27-53 (249)
446 1t2d_A LDH-P, L-lactate dehydr 46.7 15 0.0005 34.6 3.9 27 1-27 11-38 (322)
447 2dkn_A 3-alpha-hydroxysteroid 46.7 15 0.0005 32.8 3.8 28 1-28 9-36 (255)
448 3phh_A Shikimate dehydrogenase 46.6 16 0.00054 33.4 3.9 28 1-28 125-152 (269)
449 3dfz_A SIRC, precorrin-2 dehyd 46.6 13 0.00046 32.8 3.3 27 1-27 38-64 (223)
450 1ooe_A Dihydropteridine reduct 46.5 13 0.00044 33.0 3.3 28 1-28 11-38 (236)
451 3l6e_A Oxidoreductase, short-c 46.4 15 0.0005 32.7 3.7 27 1-27 11-37 (235)
452 1p77_A Shikimate 5-dehydrogena 46.4 10 0.00035 34.7 2.7 27 1-27 126-152 (272)
453 2o8n_A APOA-I binding protein; 46.3 12 0.0004 34.2 3.0 19 6-24 95-113 (265)
454 1vpd_A Tartronate semialdehyde 46.2 14 0.00049 34.1 3.7 27 1-27 12-38 (299)
455 1x1t_A D(-)-3-hydroxybutyrate 46.2 16 0.00054 32.9 4.0 27 1-27 12-38 (260)
456 1uzm_A 3-oxoacyl-[acyl-carrier 46.2 15 0.00052 32.8 3.8 27 1-27 23-49 (247)
457 3un1_A Probable oxidoreductase 46.1 17 0.00057 32.9 4.1 28 1-28 36-63 (260)
458 3tl2_A Malate dehydrogenase; c 46.0 14 0.00048 34.7 3.6 26 1-26 15-41 (315)
459 2d1y_A Hypothetical protein TT 45.7 16 0.00054 32.9 3.8 28 1-28 14-41 (256)
460 1uay_A Type II 3-hydroxyacyl-C 45.7 14 0.00048 32.6 3.5 28 1-28 10-37 (242)
461 2zat_A Dehydrogenase/reductase 45.6 15 0.00052 33.0 3.7 27 1-27 22-48 (260)
462 3awd_A GOX2181, putative polyo 45.6 15 0.00051 33.0 3.7 27 1-27 21-47 (260)
463 2ehd_A Oxidoreductase, oxidore 45.6 15 0.00052 32.3 3.7 27 1-27 13-39 (234)
464 4e6p_A Probable sorbitol dehyd 45.6 15 0.00052 33.1 3.7 27 1-27 16-42 (259)
465 3e8x_A Putative NAD-dependent 45.6 14 0.00049 32.5 3.5 27 1-27 29-55 (236)
466 1kyq_A Met8P, siroheme biosynt 45.6 7.9 0.00027 35.5 1.7 27 1-27 20-46 (274)
467 2qyt_A 2-dehydropantoate 2-red 45.5 11 0.00036 35.2 2.7 25 1-25 15-45 (317)
468 3imf_A Short chain dehydrogena 45.4 15 0.00052 33.0 3.7 27 1-27 14-40 (257)
469 3f1l_A Uncharacterized oxidore 45.2 15 0.00053 32.9 3.7 27 1-27 20-46 (252)
470 3rwb_A TPLDH, pyridoxal 4-dehy 45.2 16 0.00054 32.7 3.7 27 1-27 14-40 (247)
471 3ond_A Adenosylhomocysteinase; 45.2 15 0.00051 36.7 3.8 27 1-27 272-298 (488)
472 2q2v_A Beta-D-hydroxybutyrate 45.2 17 0.00058 32.6 4.0 28 1-28 12-39 (255)
473 2pgd_A 6-phosphogluconate dehy 45.2 16 0.00054 36.7 4.0 27 1-27 9-35 (482)
474 2zxi_A TRNA uridine 5-carboxym 45.1 24 0.00082 36.6 5.4 31 1-31 34-65 (637)
475 3ew7_A LMO0794 protein; Q8Y8U8 45.1 16 0.00056 31.6 3.8 27 1-27 8-34 (221)
476 1cyd_A Carbonyl reductase; sho 45.1 16 0.00053 32.5 3.7 27 1-27 15-41 (244)
477 3p19_A BFPVVD8, putative blue 45.1 16 0.00055 33.2 3.8 26 1-26 24-49 (266)
478 3h7a_A Short chain dehydrogena 45.1 15 0.00051 33.0 3.6 27 1-27 15-41 (252)
479 1a5z_A L-lactate dehydrogenase 45.1 14 0.00047 34.8 3.4 27 1-27 7-35 (319)
480 4imr_A 3-oxoacyl-(acyl-carrier 44.8 17 0.00057 33.3 3.9 28 1-28 41-68 (275)
481 3pk0_A Short-chain dehydrogena 44.8 16 0.00055 33.0 3.7 27 1-27 18-44 (262)
482 2ag5_A DHRS6, dehydrogenase/re 44.5 16 0.00055 32.6 3.7 27 1-27 14-40 (246)
483 3g5s_A Methylenetetrahydrofola 44.5 7.8 0.00027 37.8 1.5 32 484-516 322-356 (443)
484 2jah_A Clavulanic acid dehydro 44.4 16 0.00056 32.6 3.7 27 1-27 15-41 (247)
485 3op4_A 3-oxoacyl-[acyl-carrier 44.4 17 0.00057 32.6 3.8 27 1-27 17-43 (248)
486 3asu_A Short-chain dehydrogena 44.3 16 0.00055 32.7 3.6 27 1-27 8-34 (248)
487 3obb_A Probable 3-hydroxyisobu 44.3 16 0.00056 33.9 3.7 27 1-27 10-36 (300)
488 3vtz_A Glucose 1-dehydrogenase 44.3 17 0.00058 33.1 3.8 28 1-28 22-49 (269)
489 3ai3_A NADPH-sorbose reductase 44.3 16 0.00056 32.9 3.7 27 1-27 15-41 (263)
490 3ak4_A NADH-dependent quinucli 44.2 16 0.00055 32.9 3.7 27 1-27 20-46 (263)
491 3gvc_A Oxidoreductase, probabl 44.2 16 0.00055 33.4 3.7 27 1-27 37-63 (277)
492 2cvz_A Dehydrogenase, 3-hydrox 44.0 15 0.00052 33.6 3.5 26 1-27 8-33 (289)
493 1pgj_A 6PGDH, 6-PGDH, 6-phosph 44.0 16 0.00056 36.5 3.9 27 1-27 8-34 (478)
494 4b4o_A Epimerase family protei 43.8 19 0.00066 33.0 4.3 28 1-28 8-35 (298)
495 4b79_A PA4098, probable short- 43.8 18 0.00062 32.4 3.8 28 1-28 19-46 (242)
496 1x0v_A GPD-C, GPDH-C, glycerol 43.8 10 0.00035 36.1 2.3 28 1-28 15-49 (354)
497 1yde_A Retinal dehydrogenase/r 43.8 17 0.00057 33.1 3.7 27 1-27 17-43 (270)
498 2vhw_A Alanine dehydrogenase; 43.8 16 0.00055 35.3 3.7 27 1-27 175-201 (377)
499 2wsb_A Galactitol dehydrogenas 43.8 17 0.00057 32.5 3.7 27 1-27 19-45 (254)
500 2fwm_X 2,3-dihydro-2,3-dihydro 43.7 18 0.0006 32.4 3.8 28 1-28 15-42 (250)
No 1
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=100.00 E-value=1.3e-64 Score=528.98 Aligned_cols=475 Identities=22% Similarity=0.347 Sum_probs=306.6
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCCCCcceeeecccCCceeccchhhhhhhh--hhhhccccc--cccCceEeecCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHVLGGAAVTEEIIPGFQFSRASYLLSLLR--PHIYKDLEL--KKHGLKLLTRDP 76 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~s~~~~~G~~~d~g~~~~~~~~--~~~~~~lgl--~~~g~~~~~~~~ 76 (523)
|||++||+||++|+++|++|+||||++++||+++|++ .+||.||.|++++.... ..+++.++. .+. +++.+.++
T Consensus 8 GaG~~GL~aA~~La~~G~~V~VlEa~~~~GG~~~t~~-~~G~~~D~G~~~~~~~~~~~~l~~~~g~~~~~~-~~~~~~~~ 85 (501)
T 4dgk_A 8 GAGFGGLALAIRLQAAGIPVLLLEQRDKPGGRAYVYE-DQGFTFDAGPTVITDPSAIEELFALAGKQLKEY-VELLPVTP 85 (501)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEECCC-------CEEE-ETTEEEECSCCCBSCTHHHHHHHHTTTCCGGGT-CCEEEESS
T ss_pred CCcHHHHHHHHHHHHCCCcEEEEccCCCCCCcEEEEE-eCCEEEecCceeecCchhHHHHHHHhcchhhhc-eeeEecCc
Confidence 8999999999999999999999999999999999998 79999999998853221 245555553 232 66766665
Q ss_pred CCcccCCCCcccCCCCceeecCCHHHHHHHHHccChhhHHHHHHHHHHHHHHHhHHH-hhhhcCCCChhhHHHHHHHhcc
Q psy893 77 RSYTPLSPDKWTNKAKSLTLGLDPQKNYEQIARFSVKDAQNFEKYDHHIEEITNLLD-PLFDIAPHDFGNLLMYNLFTRR 155 (523)
Q Consensus 77 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 155 (523)
. +...+.+ |+.+.++.|.+++.+.+.++++.+.+.+.+|++.+.++.+... .+...+.....++... ....
T Consensus 86 ~-~~~~~~~-----g~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 157 (501)
T 4dgk_A 86 F-YRLCWES-----GKVFNYDNDQTRLEAQIQQFNPRDVEGYRQFLDYSRAVFKEGYLKLGTVPFLSFRDMLRA--APQL 157 (501)
T ss_dssp S-EEEEETT-----SCEEEECSCHHHHHHHHHHHCTHHHHHHHHHHHHHHHHTSSSCC--CCCCCCCHHHHHHS--GGGT
T ss_pred c-eEEEcCC-----CCEEEeeccHHHHHHHHhhcCccccchhhhHHHHHHHhhhhhhhhccccccchhhhhhhh--hhhh
Confidence 3 3333343 8889999999999999999999999999999888777654321 2222222333322111 1111
Q ss_pred ccHHHHHHHHhhcHHHHHHhhcCChHHHHHHhhhhhccCCCCCCCcchHHHHHHHHhhcccCCCCceeecCCCHHHHHHH
Q psy893 156 GEMKDVYSLLTCSAFSILNDWFESEPLKATLLTDGLIGAMVSPHSPSTSYVLLHHVMGGAEGVKGAWAYPEGGMGAVSQA 235 (523)
Q Consensus 156 ~~~~~~~~~~~~s~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~gG~~~l~~~ 235 (523)
..+. ...++.+++.++|.++.++.++...+.... ..|...++.+.++++. ....|.| +|+||+++|+++
T Consensus 158 ~~l~-----~~~~~~~~~~~~~~~~~l~~~l~~~~~~~g-~~p~~~~~~~~~~~~~----~~~~G~~-~p~GG~~~l~~a 226 (501)
T 4dgk_A 158 AKLQ-----AWRSVYSKVASYIEDEHLRQAFSFHSLLVG-GNPFATSSIYTLIHAL----EREWGVW-FPRGGTGALVQG 226 (501)
T ss_dssp TTSH-----HHHHHHHHHHTTCCCHHHHHHHHHHHHHHH-SCC--CCCTHHHHHHH----HSCCCEE-EETTHHHHHHHH
T ss_pred hhhh-----hcccHHHHHHHHhccHHHHhhhhhhhcccC-CCcchhhhhhhhhhhh----hccCCeE-EeCCCCcchHHH
Confidence 1111 124678889999999999998876654322 3566666666655542 2356777 999999999999
Q ss_pred HHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-eCCeEEEcCEEEEcCChHHHHHhhCCCCCCCHHHHHHHhcCCCCCC
Q psy893 236 LARSAQASGAQLFTSQTVTEITLDSDKRASGVV-TNGLEIKAKYVLSNTTAKCTLLDLIPKGNLDERTTQAVQSIDYASP 314 (523)
Q Consensus 236 l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~~g~~~~ad~vI~a~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~ 314 (523)
|++.++++|++|++|++|++|..++ +++++|+ .||+++.||.||+|++++.++.+|++....+....+++++.+++.+
T Consensus 227 L~~~~~~~Gg~I~~~~~V~~I~~~~-~~~~gV~~~~g~~~~ad~VV~~a~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~s 305 (501)
T 4dgk_A 227 MIKLFQDLGGEVVLNARVSHMETTG-NKIEAVHLEDGRRFLTQAVASNADVVHTYRDLLSQHPAAVKQSNKLQTKRMSNS 305 (501)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEEET-TEEEEEEETTSCEEECSCEEECCC---------------------------CCE
T ss_pred HHHHHHHhCCceeeecceeEEEeeC-CeEEEEEecCCcEEEcCEEEECCCHHHHHHHhccccccchhhhhhhhccccCCc
Confidence 9999999999999999999999998 9999999 8999999999999999999888888876666677778888888889
Q ss_pred eEEEEEecCCCCcccCCCCCCCCCCCCCCcceEEeCCCCHHH-HHHHHHHhhcCCCCCCCeEEEEcCCCCCCCCCCCCce
Q psy893 315 VTKINVALKSIPNFLADPNPSENTVQPHHHGSIHLNCEDMQQ-VFDAYQDATQGIPSTRPMIEMVLPSSLDNTLSPPGHH 393 (523)
Q Consensus 315 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~v~~~s~~d~~~ap~G~~ 393 (523)
.++++++++..+.. +.+| ++++ .+++.+ +++.| ..+.++++|++++++||..||+++|+|++
T Consensus 306 ~~~~~~~l~~~~~~-----------l~~~--~i~~-~~~~~~~~~~~~---~~~~~~~~~~~~v~~~s~~dp~~ap~G~~ 368 (501)
T 4dgk_A 306 LFVLYFGLNHHHDQ-----------LAHH--TVCF-GPRYRELIDEIF---NHDGLAEDFSLYLHAPCVTDSSLAPEGCG 368 (501)
T ss_dssp EEEEEEEESSCCTT-----------SCSE--EEEE-ECC----------------CCCEEEEEEECGGGTCGGGSSTTCE
T ss_pred eeEEEecccCCccc-----------cccc--eecc-ccchhhhccccc---cccccccCCceecccCCCCCCCcCCCCCc
Confidence 99999999976532 3455 7777 344432 33333 23567788999999999999999999999
Q ss_pred EEEEEecccccCCCCCCCCCHHHHHHHHHHHHHHHHH-hCCCCCCCeEEeEecChhhHHHhcCCCCCccccCcccccccc
Q psy893 394 VCLLFTQFTPYKLAGDRDWTEEDKANYATNVFSSIEQ-YCPGFTQDIVGYEILTPPDLEKEFGLTGGNIFHGALSLNQLL 472 (523)
Q Consensus 394 ~i~~~~~~~p~~~~~~~~~~~~~k~~~~~~~~~~l~~-~~P~~~~~i~~~~~~tP~~~~~~~~~~~G~~~g~~~~~~q~~ 472 (523)
++++++. +|+....+.+| ++.|+++.+++++.|++ ++|+++++|+..++.||.||+++++.++|++||..+.+.|..
T Consensus 369 ~~~~~~~-~p~~~~~~~~~-~~~~~~~~~~vl~~l~~~~~P~~~~~i~~~~~~tP~~~~~~~~~~~G~~~g~~~~~~q~~ 446 (501)
T 4dgk_A 369 SYYVLAP-VPHLGTANLDW-TVEGPKLRDRIFAYLEQHYMPGLRSQLVTHRMFTPFDFRDQLNAYHGSAFSVEPVLTQSA 446 (501)
T ss_dssp EEEEEEE-ECCTTTSCCCH-HHHHHHHHHHHHHHHHHHTCTTHHHHEEEEEEECTTTTC---------------------
T ss_pred eEEEEEe-cCccccccccH-HHHHHHHHHHHHHHHHHhhCCChHHceEEEEECCHHHHHHHcCCCCccccChhcchhhcc
Confidence 9888764 55532333355 55789999999999997 469999999999999999999999999999999999999988
Q ss_pred cCCCCCCCCCCCCCCCCCCeEecCCCCCCCCCCCCc--cHHHHHHHHHHHhc
Q psy893 473 FNRPLPIQGPSSPFTLIPHLLLCGSGAHPGGGVCGA--PGYIAAQMVNRLMR 522 (523)
Q Consensus 473 ~~rp~~~~~~~~~~t~i~~LylaG~~~~pg~g~~~a--sG~~aA~~i~~~~~ 522 (523)
++||. ...|||+|||+||+|||||+|++|| ||++||++|++||.
T Consensus 447 ~~RP~------~~~t~i~gLyl~G~~t~pG~Gv~ga~~SG~~aA~~il~dL~ 492 (501)
T 4dgk_A 447 WFRPH------NRDKTITNLYLVGAGTHPGAGIPGVIGSAKATAGLMLEDLI 492 (501)
T ss_dssp ---------------CCTTEEECCCH------HHHHHHHHHHHHHHHHHHHC
T ss_pred ccCCC------CCCCCCCCEEEECCCCCCcccHHHHHHHHHHHHHHHHHHhc
Confidence 88982 3458999999999999999999987 99999999999984
No 2
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=100.00 E-value=1.4e-35 Score=302.88 Aligned_cols=401 Identities=20% Similarity=0.221 Sum_probs=253.9
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCCCCcceeeecccCCceeccchhhhh-hh----hhhhhccccccccCceEeecC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHVLGGAAVTEEIIPGFQFSRASYLLS-LL----RPHIYKDLELKKHGLKLLTRD 75 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~s~~~~~G~~~d~g~~~~~-~~----~~~~~~~lgl~~~g~~~~~~~ 75 (523)
|||++||+||++|+++|++|+||||++++||+++++. .+|+.+|.|++++. .. ...+++++|++.. +...+
T Consensus 7 GaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~~~~-~~G~~~d~G~~~~~~~~~~~~~~~l~~~lg~~~~---~~~~~ 82 (425)
T 3ka7_A 7 GAGLGGLLSAARLSKAGHEVEVFERLPITGGRFTNLS-YKGFQLSSGAFHMLPNGPGGPLACFLKEVEASVN---IVRSE 82 (425)
T ss_dssp CCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTSSEEE-ETTEEEESSSCSCBTTGGGSHHHHHHHHTTCCCC---EEECC
T ss_pred CCCHHHHHHHHHHHhCCCceEEEeCCCCCCCceeeec-cCCcEEcCCCceEecCCCccHHHHHHHHhCCCce---EEecC
Confidence 8999999999999999999999999999999999987 78999999964421 11 1256777776422 22222
Q ss_pred CCCcccCCCC---cccCCCCceeecCCHHHHHHHHHccChhhHHHHHHHHHHHHHHHhHHHhhhhcCCCChhhHHHHHHH
Q psy893 76 PRSYTPLSPD---KWTNKAKSLTLGLDPQKNYEQIARFSVKDAQNFEKYDHHIEEITNLLDPLFDIAPHDFGNLLMYNLF 152 (523)
Q Consensus 76 ~~~~~~~~~~---~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (523)
.........+ .+...++.+.+. .. ...+...+. . ++...+... ....
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~~~~~~~~~------~----~~~~~~~~~-~~~~------------ 132 (425)
T 3ka7_A 83 MTTVRVPLKKGNPDYVKGFKDISFN-DF------PSLLSYKDR------M----KIALLIVST-RKNR------------ 132 (425)
T ss_dssp CCEEEEESSTTCCSSTTCEEEEEGG-GG------GGGSCHHHH------H----HHHHHHHHT-TTSC------------
T ss_pred CceEEeecCCCcccccccccceehh-hh------hhhCCHHHH------H----HHHHHHHhh-hhcC------------
Confidence 1100000000 000001111111 00 000111110 0 000000000 0000
Q ss_pred hccccHHHHHHHHhhcHHHHHHhhcCChHHHHHHhhhhhccCCCCCCCcchH--HHHHHHHhhcccCCCCceeecCCCHH
Q psy893 153 TRRGEMKDVYSLLTCSAFSILNDWFESEPLKATLLTDGLIGAMVSPHSPSTS--YVLLHHVMGGAEGVKGAWAYPEGGMG 230 (523)
Q Consensus 153 ~~~~~~~~~~~~~~~s~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~gG~~ 230 (523)
. ...++.+++.+++.++.++.++...........+...++. +..+.... ...+.+ ++.||++
T Consensus 133 --~---------~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~----~~~~~~-~~~gG~~ 196 (425)
T 3ka7_A 133 --P---------SGSSLQAWIKSQVSDEWLIKFADSFCGWALSLKSDEVPVEEVFEIIENMY----RFGGTG-IPEGGCK 196 (425)
T ss_dssp --C---------CSSBHHHHHHHHCCCHHHHHHHHHHHHHHHSSCGGGSBHHHHHHHHHHHH----HHCSCE-EETTSHH
T ss_pred --C---------CCCCHHHHHHHhcCCHHHHHHHHHHHHHHhCCCcccchHHHHHHHHHHHH----hcCCcc-ccCCCHH
Confidence 0 1247788899999988888776544321111345444442 22222211 123444 8999999
Q ss_pred HHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEEeCCeEEEcCEEEEcCChHHHHHhhCCC-CCC--CHHHHHHHh
Q psy893 231 AVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVVTNGLEIKAKYVLSNTTAKCTLLDLIPK-GNL--DERTTQAVQ 307 (523)
Q Consensus 231 ~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~~~g~~~~ad~vI~a~~~~~~~~~ll~~-~~~--~~~~~~~~~ 307 (523)
.++++|++.++++|++|+++++|++|..++ +++++|+.+|++++||.||+|++++.+ .+|+++ ..+ ++.+.++++
T Consensus 197 ~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~-~~~~gv~~~g~~~~ad~VV~a~~~~~~-~~ll~~~~~~~~~~~~~~~~~ 274 (425)
T 3ka7_A 197 GIIDALETVISANGGKIHTGQEVSKILIEN-GKAAGIIADDRIHDADLVISNLGHAAT-AVLCSEALSKEADAAYFKMVG 274 (425)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEEET-TEEEEEEETTEEEECSEEEECSCHHHH-HHHTTTTCCTTTTHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEECCceeEEEEEC-CEEEEEEECCEEEECCEEEECCCHHHH-HHhcCCcccccCCHHHHHHhh
Confidence 999999999999999999999999999988 888778866889999999999999996 578864 334 777888898
Q ss_pred cCCCCCCeEEEEEecCCCCcccCCCCCCCCCCCCCCcceEEeCCCCHHHHHHHHHHhhcCCCCCCCeEEEEcCCCCCCCC
Q psy893 308 SIDYASPVTKINVALKSIPNFLADPNPSENTVQPHHHGSIHLNCEDMQQVFDAYQDATQGIPSTRPMIEMVLPSSLDNTL 387 (523)
Q Consensus 308 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~~~s~~d~~~ 387 (523)
++.++ +.+++++++++++ ..+| ++++ ..+ ..+...++++|..||++
T Consensus 275 ~~~~~-~~~~v~l~~~~~~-------------~~~~--~~~~-~~~-----------------~~~~~~~~~~s~~~p~~ 320 (425)
T 3ka7_A 275 TLQPS-AGIKICLAADEPL-------------VGHT--GVLL-TPY-----------------TRRINGVNEVTQADPEL 320 (425)
T ss_dssp HCCCB-EEEEEEEEESSCS-------------SCSS--SEEE-CCS-----------------SSSEEEEECGGGTCGGG
T ss_pred CcCCC-ceEEEEeecCCCc-------------cCcC--EEEE-CCC-----------------hhhcceEEeccCCCCCc
Confidence 88876 6788999999764 1234 5666 332 12456788999999999
Q ss_pred CCCCceEEEEEecccccCCCCCCCCCHHHHHHHHHHHHHHHHHhCCCCCCCeEEeEecChhhHHHhcCCCCCccccCccc
Q psy893 388 SPPGHHVCLLFTQFTPYKLAGDRDWTEEDKANYATNVFSSIEQYCPGFTQDIVGYEILTPPDLEKEFGLTGGNIFHGALS 467 (523)
Q Consensus 388 ap~G~~~i~~~~~~~p~~~~~~~~~~~~~k~~~~~~~~~~l~~~~P~~~~~i~~~~~~tP~~~~~~~~~~~G~~~g~~~~ 467 (523)
+|+|+++++++.. .++ ++.+ ..++..++++++|++++|+.+..++ .+. .|.. ..|...+ .+
T Consensus 321 ap~G~~~l~~~~~-~~~------~~~~-~~~~~~~~~~~~l~~~~p~~~~~~~--~v~---~~~~--~~P~~~~---~~- 381 (425)
T 3ka7_A 321 APPGKHLTMCHQY-VAP------ENVK-NLESEIEMGLEDLKEIFPGKRYEVL--LIQ---SYHD--EWPVNRA---AS- 381 (425)
T ss_dssp SCTTCEEEEEEEE-ECG------GGGG-GHHHHHHHHHHHHHHHSTTCCEEEE--EEE---EEBT--TBCSBSS---CT-
T ss_pred CCCCCeEEEEEec-ccc------cccc-chHHHHHHHHHHHHHhCCCCceEEE--EEE---EECC--Ccccccc---cc-
Confidence 9999998876542 211 1112 2245579999999999998543333 221 2221 1111111 10
Q ss_pred ccccccCCCCCCCCCCCCCCCCCCeEecCCCCCC--CCCCCCc--cHHHHHHHHH
Q psy893 468 LNQLLFNRPLPIQGPSSPFTLIPHLLLCGSGAHP--GGGVCGA--PGYIAAQMVN 518 (523)
Q Consensus 468 ~~q~~~~rp~~~~~~~~~~t~i~~LylaG~~~~p--g~g~~~a--sG~~aA~~i~ 518 (523)
..+| ..+||++|||+||||+++ |.|+++| ||+.||++|+
T Consensus 382 -----~~~~-------~~~~p~~gL~laG~~~~~~gg~gv~~~~~s~~~~~~~i~ 424 (425)
T 3ka7_A 382 -----GTDP-------GNETPFSGLYVVGDGAKGKGGIEVEGVALGVMSVMEKVL 424 (425)
T ss_dssp -----TCCC-------CSBCSSBTEEECSTTSCCTTCCHHHHHHHHHHHHHHC--
T ss_pred -----CCCC-------CCCCCcCCeEEeCCccCCCCCCccHHHHHHHHHHHHHhh
Confidence 1234 678999999999999988 5566776 9999999987
No 3
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=100.00 E-value=5.6e-34 Score=290.40 Aligned_cols=385 Identities=21% Similarity=0.236 Sum_probs=247.5
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCCCCcceeeecccCCceeccchhhhhhh-----hhhhhccccccccCceEeecC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHVLGGAAVTEEIIPGFQFSRASYLLSLL-----RPHIYKDLELKKHGLKLLTRD 75 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~s~~~~~G~~~d~g~~~~~~~-----~~~~~~~lgl~~~g~~~~~~~ 75 (523)
|||++||+||++|+++|++|+||||++++||+++++. .+|+.+|.|++++... ...+++++++. .++...+
T Consensus 7 GaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~~~~-~~g~~~d~G~~~~~~~~~~~~~~~l~~~lg~~---~~~~~~~ 82 (421)
T 3nrn_A 7 GAGLGGLLAGAFLARNGHEIIVLEKSAMIGGRFTNLP-YKGFQLSTGALHMIPHGEDGPLAHLLRILGAK---VEIVNSN 82 (421)
T ss_dssp SCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSSEEE-ETTEEEESSSCSEETTTTSSHHHHHHHHHTCC---CCEEECS
T ss_pred CCCHHHHHHHHHHHHCCCeEEEEeCCCCCCceeEEec-cCCEEEecCCeEEEccCCChHHHHHHHHhCCc---ceEEECC
Confidence 8999999999999999999999999999999999987 7899999997543111 12567777654 3343333
Q ss_pred CCCcccCCCCcccCCCCceeecCCHHHHHHHHHccChhhHHHHHHHHHHHHHHHhHHHhhhhcCCCChhhHHHHHHHhcc
Q psy893 76 PRSYTPLSPDKWTNKAKSLTLGLDPQKNYEQIARFSVKDAQNFEKYDHHIEEITNLLDPLFDIAPHDFGNLLMYNLFTRR 155 (523)
Q Consensus 76 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (523)
+.. ...++ ++.+.++... ..+.+.+...+..+.... . .. ..+
T Consensus 83 ~~~-~~~~~------g~~~~~~~~~-------~~l~~~~~~~~~~~~~~~---~----~~--~~~--------------- 124 (421)
T 3nrn_A 83 PKG-KILWE------GKIFHYRESW-------KFLSVKEKAKALKLLAEI---R----MN--KLP--------------- 124 (421)
T ss_dssp SSC-EEEET------TEEEEGGGGG-------GGCC--------CCHHHH---H----TT--CCC---------------
T ss_pred CCe-EEEEC------CEEEEcCCch-------hhCCHhHHHHHHHHHHHH---H----hc--cCC---------------
Confidence 321 11112 4444333211 112211111111110000 0 00 000
Q ss_pred ccHHHHHHHHhhcHHHHHHhh-cCChHHHHHHhhhhhccCCCCCCCcch--HHHHHHHHhhcccCCCCceeecCCCHHHH
Q psy893 156 GEMKDVYSLLTCSAFSILNDW-FESEPLKATLLTDGLIGAMVSPHSPST--SYVLLHHVMGGAEGVKGAWAYPEGGMGAV 232 (523)
Q Consensus 156 ~~~~~~~~~~~~s~~~~l~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~gG~~~l 232 (523)
. ...++.+++.++ +.++.++.++...........+...++ .+..+.... ...+.+ +++||++.+
T Consensus 125 ~--------~~~s~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~g~~-~~~gG~~~l 191 (421)
T 3nrn_A 125 K--------EEIPADEWIKEKIGENEFLLSVLESFAGWADSVSLSDLTALELAKEIRAAL----RWGGPG-LIRGGCKAV 191 (421)
T ss_dssp C--------CCSBHHHHHHHHTCCCHHHHHHHHHHHHHHHSSCGGGSBHHHHHHHHHHHH----HHCSCE-EETTCHHHH
T ss_pred C--------CCCCHHHHHHHhcCCcHHHHHHHHHHHHHhcCCCcccCCHHHHHHHHHHHh----hcCCcc-eecCCHHHH
Confidence 0 014677888888 888888776654332111134444444 222232221 123444 899999999
Q ss_pred HHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEEeCCeEEEcCEEEEcCChHHHHHhhCCCCCCCHHHHHHHhcCCCC
Q psy893 233 SQALARSAQASGAQLFTSQTVTEITLDSDKRASGVVTNGLEIKAKYVLSNTTAKCTLLDLIPKGNLDERTTQAVQSIDYA 312 (523)
Q Consensus 233 ~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~~~g~~~~ad~vI~a~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~ 312 (523)
+++|++.++++|++|+++++|++|..++ +++ |..+|++++||.||+|++++.+ .+|++.+.+++.+.++++++.++
T Consensus 192 ~~~l~~~~~~~G~~i~~~~~V~~i~~~~-~~v--V~~~g~~~~ad~Vv~a~~~~~~-~~ll~~~~~~~~~~~~~~~~~~~ 267 (421)
T 3nrn_A 192 IDELERIIMENKGKILTRKEVVEINIEE-KKV--YTRDNEEYSFDVAISNVGVRET-VKLIGRDYFDRDYLKQVDSIEPS 267 (421)
T ss_dssp HHHHHHHHHTTTCEEESSCCEEEEETTT-TEE--EETTCCEEECSEEEECSCHHHH-HHHHCGGGSCHHHHHHHHTCCCC
T ss_pred HHHHHHHHHHCCCEEEcCCeEEEEEEEC-CEE--EEeCCcEEEeCEEEECCCHHHH-HHhcCcccCCHHHHHHHhCCCCC
Confidence 9999999999999999999999999877 665 6667778999999999999986 57887545777888889999887
Q ss_pred CCeEEEEEecCCCCcccCCCCCCCCCCCCCCcceEEeCCCCHHHHHHHHHHhhcCCCCCCCeEEEEcCCCCCCCCCCCCc
Q psy893 313 SPVTKINVALKSIPNFLADPNPSENTVQPHHHGSIHLNCEDMQQVFDAYQDATQGIPSTRPMIEMVLPSSLDNTLSPPGH 392 (523)
Q Consensus 313 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~~~s~~d~~~ap~G~ 392 (523)
+.+++++++++++ +.+| ++++ .++. . ...++++|..||+++|+|+
T Consensus 268 -~~~~v~l~~~~~~-------------~~~~--~~~~-~~~~-----------------~-~~~i~~~s~~~p~~ap~G~ 312 (421)
T 3nrn_A 268 -EGIKFNLAVPGEP-------------RIGN--TIVF-TPGL-----------------M-INGFNEPSALDKSLAREGY 312 (421)
T ss_dssp -CEEEEEEEEESSC-------------SSCS--SEEE-CTTS-----------------S-SCEEECGGGTCGGGSCTTE
T ss_pred -ceEEEEEEEcCCc-------------ccCC--eEEE-cCCc-----------------c-eeeEeccCCCCCCcCCCCc
Confidence 7899999999753 1334 4566 3321 1 2357889999999999999
Q ss_pred eEEEEEecccccCCCCCCCCCHHHHHHHHHHHHHHHHHhCCCCCCCeEEeEecChhhHHHhcCCCCCccccCcccccccc
Q psy893 393 HVCLLFTQFTPYKLAGDRDWTEEDKANYATNVFSSIEQYCPGFTQDIVGYEILTPPDLEKEFGLTGGNIFHGALSLNQLL 472 (523)
Q Consensus 393 ~~i~~~~~~~p~~~~~~~~~~~~~k~~~~~~~~~~l~~~~P~~~~~i~~~~~~tP~~~~~~~~~~~G~~~g~~~~~~q~~ 472 (523)
+++.+... .+. . + . ++..+.++++|++++| ...++..... .. +.|. |+...
T Consensus 313 ~~~~~~~~-~~~------~-~--~-~~~~~~~~~~L~~~~p--~~~~~~~~~~-----~~--~~p~---~~~~~------ 363 (421)
T 3nrn_A 313 TLIMAHMA-LKN------G-N--V-KKAIEKGWEELLEIFP--EGEPLLAQVY-----RD--GNPV---NRTRA------ 363 (421)
T ss_dssp EEEEEEEE-CTT------C-C--H-HHHHHHHHHHHHHHCT--TCEEEEEEEC---------------------------
T ss_pred eEEEEEEe-ecc------c-c--H-HHHHHHHHHHHHHHcC--CCeEEEeeec-----cC--CCCc---ccccC------
Confidence 98876642 321 1 1 1 2448899999999999 3233322222 11 1111 11000
Q ss_pred cCCCCCCCCCCCCCCCCCCeEecCCCCCCCCCC--CCc--cHHHHHHHH
Q psy893 473 FNRPLPIQGPSSPFTLIPHLLLCGSGAHPGGGV--CGA--PGYIAAQMV 517 (523)
Q Consensus 473 ~~rp~~~~~~~~~~t~i~~LylaG~~~~pg~g~--~~a--sG~~aA~~i 517 (523)
..++ . .++ +|||+|||++.+++|+ ++| ||.+||++|
T Consensus 364 ~~~~-------~-~~~-~gl~laGd~~~~~~g~~~~ga~~sg~~aA~~l 403 (421)
T 3nrn_A 364 GLHI-------E-WPL-NEVLVVGDGYRPPGGIEVDGIALGVMKALEKL 403 (421)
T ss_dssp --CC-------C-CCC-SSEEECSTTCCCTTCCHHHHHHHHHHHHHHHT
T ss_pred CCCC-------C-CCC-CcEEEECCcccCCCceeeehHHHHHHHHHHHh
Confidence 0111 4 678 9999999999887778 877 999999998
No 4
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=99.98 E-value=1.9e-31 Score=279.07 Aligned_cols=423 Identities=17% Similarity=0.118 Sum_probs=252.2
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCCCCcceeeecccCCceeccchhhhhhhhh---hhhccccccccCceEeecCCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHVLGGAAVTEEIIPGFQFSRASYLLSLLRP---HIYKDLELKKHGLKLLTRDPR 77 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~s~~~~~G~~~d~g~~~~~~~~~---~~~~~lgl~~~g~~~~~~~~~ 77 (523)
|||++||+||++|+++|++|+|||+++++||++++.+..+|+.+|.|++++....+ .+++++|++. ......
T Consensus 11 GaG~aGL~aA~~L~~~G~~V~vlE~~~~~GGr~~t~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lgl~~-----~~~~~~ 85 (520)
T 1s3e_A 11 GGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYTLRNQKVKYVDLGGSYVGPTQNRILRLAKELGLET-----YKVNEV 85 (520)
T ss_dssp CCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEECCTTTSCEESSCCEECTTCHHHHHHHHHTTCCE-----EECCCS
T ss_pred CCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCceeecccCCCcccccCceEecCCcHHHHHHHHHcCCcc-----eecccC
Confidence 89999999999999999999999999999999999873248999999887654333 4556666542 221111
Q ss_pred CcccCCCCcccCCCCceeecCCHHHHHHHHHccChhhHHHHHHHHHHHHHHHhHHHhhhhcCCCChhhHHHHHHHhcccc
Q psy893 78 SYTPLSPDKWTNKAKSLTLGLDPQKNYEQIARFSVKDAQNFEKYDHHIEEITNLLDPLFDIAPHDFGNLLMYNLFTRRGE 157 (523)
Q Consensus 78 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (523)
....+.. +|+.+.+...... .+.+.+...+.+++..+.++...+. ... .+. ...
T Consensus 86 ~~~~~~~-----~g~~~~~~~~~p~------~~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~~~----------~~~ 139 (520)
T 1s3e_A 86 ERLIHHV-----KGKSYPFRGPFPP------VWNPITYLDHNNFWRTMDDMGREIP---SDA--PWK----------APL 139 (520)
T ss_dssp SEEEEEE-----TTEEEEECSSSCC------CCSHHHHHHHHHHHHHHHHHHTTSC---TTC--GGG----------STT
T ss_pred CceEEEE-----CCEEEEecCCCCC------CCCHHHHHHHHHHHHHHHHHHhhcC---cCC--Ccc----------ccc
Confidence 1111101 1333332221000 0111122223333333333322110 000 000 000
Q ss_pred HHHHHHHHhhcHHHHHHhhcCChHHHHHHhhhhh--ccCCCCCCCcchHHHHHHHHhhc------cc-CCCCceeecCCC
Q psy893 158 MKDVYSLLTCSAFSILNDWFESEPLKATLLTDGL--IGAMVSPHSPSTSYVLLHHVMGG------AE-GVKGAWAYPEGG 228 (523)
Q Consensus 158 ~~~~~~~~~~s~~~~l~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~------~~-~~~g~~~~~~gG 228 (523)
.......|+.+++.+++.++.++.++..... ++ ..+.+.++.+.+. +.... .. ...+.+.+++||
T Consensus 140 ---~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~g--~~~~~~s~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~gG 213 (520)
T 1s3e_A 140 ---AEEWDNMTMKELLDKLCWTESAKQLATLFVNLCVT--AETHEVSALWFLW-YVKQCGGTTRIISTTNGGQERKFVGG 213 (520)
T ss_dssp ---HHHHHTSBHHHHHHHHCSSHHHHHHHHHHHHHHHS--SCTTTSBHHHHHH-HHHTTTCHHHHHCSTTSTTSEEETTC
T ss_pred ---hhhhhccCHHHHHHhhCCCHHHHHHHHHHHhhhcC--CChHHhHHHHHHH-HHhhcCchhhhcccCCCcceEEEeCC
Confidence 1123457899999999999988887765432 33 3556655554322 21110 00 012223488999
Q ss_pred HHHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-eCCeEEEcCEEEEcCChHHHHHhhCCCCCCCHHHHHHHh
Q psy893 229 MGAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-TNGLEIKAKYVLSNTTAKCTLLDLIPKGNLDERTTQAVQ 307 (523)
Q Consensus 229 ~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~~g~~~~ad~vI~a~~~~~~~~~ll~~~~~~~~~~~~~~ 307 (523)
++.|+++|++.+ |++|++|++|++|..++ ++++ |+ .+|+++.||+||+|+|+..+ .+++..+.+++...+.++
T Consensus 214 ~~~l~~~l~~~l---g~~i~~~~~V~~i~~~~-~~v~-v~~~~g~~~~ad~VI~a~p~~~l-~~l~~~p~lp~~~~~~i~ 287 (520)
T 1s3e_A 214 SGQVSERIMDLL---GDRVKLERPVIYIDQTR-ENVL-VETLNHEMYEAKYVISAIPPTLG-MKIHFNPPLPMMRNQMIT 287 (520)
T ss_dssp THHHHHHHHHHH---GGGEESSCCEEEEECSS-SSEE-EEETTSCEEEESEEEECSCGGGG-GGSEEESCCCHHHHHHTT
T ss_pred HHHHHHHHHHHc---CCcEEcCCeeEEEEECC-CeEE-EEECCCeEEEeCEEEECCCHHHH-cceeeCCCCCHHHHHHHH
Confidence 999999999865 78999999999999887 6665 66 78889999999999999985 677655568888888888
Q ss_pred cCCCCCCeEEEEEecCCCCcccCCCCCCCCCCCCCCcceEEeCCCCHHHHHHHHHHhhcCCCCCCCeEEEEcCCCCCCCC
Q psy893 308 SIDYASPVTKINVALKSIPNFLADPNPSENTVQPHHHGSIHLNCEDMQQVFDAYQDATQGIPSTRPMIEMVLPSSLDNTL 387 (523)
Q Consensus 308 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~~~s~~d~~~ 387 (523)
++.+. +++++++.++++ .|. ...+.+.++...+ ..+..++..+ +.
T Consensus 288 ~~~~~-~~~kv~l~~~~~-~w~----------~~~~~g~~~~~~~------------------~~~~~~~~d~-----~~ 332 (520)
T 1s3e_A 288 RVPLG-SVIKCIVYYKEP-FWR----------KKDYCGTMIIDGE------------------EAPVAYTLDD-----TK 332 (520)
T ss_dssp SCCBC-CEEEEEEECSSC-GGG----------GGTEEEEEEECST------------------TCSCSEEEEC-----CC
T ss_pred hCCCc-ceEEEEEEeCCC-ccc----------CCCCCceeeccCC------------------CCceEEEeeC-----CC
Confidence 88875 789999999875 331 0111223332111 1233233222 22
Q ss_pred CCCCceEEEEEecccccCCCCCCCCCHHHHHHHHHHHHHHHHHhCCCCCCCeEEeEecChhhHHHhc----CCCCCcccc
Q psy893 388 SPPGHHVCLLFTQFTPYKLAGDRDWTEEDKANYATNVFSSIEQYCPGFTQDIVGYEILTPPDLEKEF----GLTGGNIFH 463 (523)
Q Consensus 388 ap~G~~~i~~~~~~~p~~~~~~~~~~~~~k~~~~~~~~~~l~~~~P~~~~~i~~~~~~tP~~~~~~~----~~~~G~~~g 463 (523)
.|.++.++..++...+. ..|.+..++++.+.+++.|++++|.-. +.+|.++.... ....|+..+
T Consensus 333 ~~~~~~~l~~~~~~~~a-----~~~~~~~~~e~~~~vl~~L~~~~~~~~-------~~~p~~~~~~~W~~~~~~~G~~~~ 400 (520)
T 1s3e_A 333 PEGNYAAIMGFILAHKA-----RKLARLTKEERLKKLCELYAKVLGSLE-------ALEPVHYEEKNWCEEQYSGGCYTT 400 (520)
T ss_dssp TTSCSCEEEEEEETHHH-----HHHTTSCHHHHHHHHHHHHHHHHTCGG-------GGCCSEEEEEEGGGCTTTCSSSCB
T ss_pred CCCCCCEEEEEccchhh-----hhhhcCCHHHHHHHHHHHHHHHhCccc-------cCCccEEEEEeeCCCCCCCCCCcc
Confidence 23334555555432111 134444578899999999999987521 12333322211 223454321
Q ss_pred CcccccccccCCCCCCCCCCCCCCCCCCeEecCCCC---CCCCCCCCc--cHHHHHHHHHHHhc
Q psy893 464 GALSLNQLLFNRPLPIQGPSSPFTLIPHLLLCGSGA---HPGGGVCGA--PGYIAAQMVNRLMR 522 (523)
Q Consensus 464 ~~~~~~q~~~~rp~~~~~~~~~~t~i~~LylaG~~~---~pg~g~~~a--sG~~aA~~i~~~~~ 522 (523)
. ..+.+....++ ..++|++||||||+++ ++| +++|| ||.+||++|++.++
T Consensus 401 ~-~~~g~~~~~~~-------~l~~p~~~L~fAG~~t~~~~~g-~v~GAi~SG~~aA~~i~~~l~ 455 (520)
T 1s3e_A 401 Y-FPPGILTQYGR-------VLRQPVDRIYFAGTETATHWSG-YMEGAVEAGERAAREILHAMG 455 (520)
T ss_dssp C-CCTTHHHHHGG-------GTTCCBTTEEECSGGGCSSSTT-SHHHHHHHHHHHHHHHHHHTT
T ss_pred c-cCCCccccchH-------HHhCCCCCEEEeehhhcCcCcE-EhHHHHHHHHHHHHHHHHHHh
Confidence 1 11222212233 4577899999999987 443 78887 99999999999874
No 5
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=99.97 E-value=2.5e-30 Score=266.08 Aligned_cols=420 Identities=17% Similarity=0.142 Sum_probs=244.3
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCCCCcceeeecccCCceeccchhhhhhhhh---hhhccccccccCceEeecCCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHVLGGAAVTEEIIPGFQFSRASYLLSLLRP---HIYKDLELKKHGLKLLTRDPR 77 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~s~~~~~G~~~d~g~~~~~~~~~---~~~~~lgl~~~g~~~~~~~~~ 77 (523)
|||++||+||++|+++|++|+|||+++++||++.+.. .+|+.+|.|++++....+ .+++++|++. ......
T Consensus 12 G~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~-~~g~~~~~g~~~~~~~~~~~~~~~~~~g~~~-----~~~~~~ 85 (453)
T 2yg5_A 12 GAGPSGLAAATALRKAGLSVAVIEARDRVGGRTWTDT-IDGAVLEIGGQWVSPDQTALISLLDELGLKT-----FERYRE 85 (453)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTCCEEE-ETTEEEECSCCCBCTTCHHHHHHHHHTTCCE-----EECCCC
T ss_pred CCCHHHHHHHHHHHHCCCcEEEEECCCCCCCceeccc-cCCceeccCCeEecCccHHHHHHHHHcCCcc-----cccccC
Confidence 8999999999999999999999999999999999887 579999999887543333 4566666542 111111
Q ss_pred CcccCCCCcccCCCCceeecCCHHHHHHHHHccChhhHHHHHHHHHHHHHHHhHHHhhhhcCCCChhhHHHHHHHhcccc
Q psy893 78 SYTPLSPDKWTNKAKSLTLGLDPQKNYEQIARFSVKDAQNFEKYDHHIEEITNLLDPLFDIAPHDFGNLLMYNLFTRRGE 157 (523)
Q Consensus 78 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (523)
....+.. .+++.+.+.... ..+.+.....+.++...+.++.+.+. ...+ +. ..
T Consensus 86 ~~~~~~~----~~g~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~--~~----------~~- 138 (453)
T 2yg5_A 86 GESVYIS----SAGERTRYTGDS-------FPTNETTKKEMDRLIDEMDDLAAQIG---AEEP--WA----------HP- 138 (453)
T ss_dssp SEEEEEC----TTSCEEEECSSS-------CSCCHHHHHHHHHHHHHHHHHHHHHC---SSCG--GG----------ST-
T ss_pred CCEEEEe----CCCceeeccCCC-------CCCChhhHHHHHHHHHHHHHHHhhcC---CCCC--CC----------Cc-
Confidence 1000000 002222221110 00111111222222322333222110 0000 00 00
Q ss_pred HHHHHHHHhhcHHHHHHhhcCChHHHHHHhhhhhccCCCCCC-CcchHHHHHHHHhhccc------CCCCceeecCCCHH
Q psy893 158 MKDVYSLLTCSAFSILNDWFESEPLKATLLTDGLIGAMVSPH-SPSTSYVLLHHVMGGAE------GVKGAWAYPEGGMG 230 (523)
Q Consensus 158 ~~~~~~~~~~s~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~------~~~g~~~~~~gG~~ 230 (523)
....+...|+.+++.+++.++.++.++...........|. +.++.+.+. +...... ...+.+.+++||++
T Consensus 139 --~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~gG~~ 215 (453)
T 2yg5_A 139 --LARDLDTVSFKQWLINQSDDAEARDNIGLFIAGGMLTKPAHSFSALQAVL-MAASAGSFSHLVDEDFILDKRVIGGMQ 215 (453)
T ss_dssp --THHHHHSSBHHHHHHHHCSCHHHHHHHHHHHCCCCCCSCTTSSBHHHHHH-HHHHTTCHHHHHCHHHHTCEEETTCTH
T ss_pred --chhhhhhccHHHHHHhhcCCHHHHHHHHHHHHhhcccCCcccccHHHHHH-HhccCCcHhhhccCCCcceEEEcCChH
Confidence 0112345789999999999998888776543211113455 555444322 2111000 00011237999999
Q ss_pred HHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEEeCCeEEEcCEEEEcCChHHHHHhhCCCCCCCHHHHHHHhcCC
Q psy893 231 AVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVVTNGLEIKAKYVLSNTTAKCTLLDLIPKGNLDERTTQAVQSID 310 (523)
Q Consensus 231 ~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~~~g~~~~ad~vI~a~~~~~~~~~ll~~~~~~~~~~~~~~~~~ 310 (523)
.|+++|++.+ |++|++|++|++|..++ ++.+.|+.+|+++.||+||+|+++..+ .+|+..+.+|+...+.++++.
T Consensus 216 ~l~~~l~~~l---g~~i~~~~~V~~i~~~~-~~~v~v~~~~~~~~ad~VI~a~p~~~~-~~l~~~p~lp~~~~~~i~~~~ 290 (453)
T 2yg5_A 216 QVSIRMAEAL---GDDVFLNAPVRTVKWNE-SGATVLADGDIRVEASRVILAVPPNLY-SRISYDPPLPRRQHQMHQHQS 290 (453)
T ss_dssp HHHHHHHHHH---GGGEECSCCEEEEEEET-TEEEEEETTTEEEEEEEEEECSCGGGG-GGSEEESCCCHHHHHHGGGEE
T ss_pred HHHHHHHHhc---CCcEEcCCceEEEEEeC-CceEEEEECCeEEEcCEEEEcCCHHHH-hcCEeCCCCCHHHHHHHhcCC
Confidence 9999999865 78999999999999877 552335567788999999999999974 677655568888888888887
Q ss_pred CCCCeEEEEEecCCCCcccCCCCCCCCCCCCCCcceEEeCCCCHHHHHHHHHHhhcCCCCCCCeEEEEcCCCCCCCCCCC
Q psy893 311 YASPVTKINVALKSIPNFLADPNPSENTVQPHHHGSIHLNCEDMQQVFDAYQDATQGIPSTRPMIEMVLPSSLDNTLSPP 390 (523)
Q Consensus 311 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~~~s~~d~~~ap~ 390 (523)
+. +++++++.++++ .|.. ....+.+ + .++ .+...+..++ .|+
T Consensus 291 ~~-~~~kv~l~~~~~-~w~~----------~~~~g~~-~-~~~------------------~~~~~~~~~~------~~~ 332 (453)
T 2yg5_A 291 LG-LVIKVHAVYETP-FWRE----------DGLSGTG-F-GAS------------------EVVQEVYDNT------NHE 332 (453)
T ss_dssp EC-CEEEEEEEESSC-GGGG----------GTEEEEE-E-CTT------------------SSSCEEEECC------CTT
T ss_pred Cc-ceEEEEEEECCC-CCCC----------CCCCcee-e-cCC------------------CCeEEEEeCC------CCC
Confidence 75 788999999865 3310 0111122 2 111 1222222222 344
Q ss_pred C-ceEEEEEecccccCCCCCCCCCHHHHHHHHHHHHHHHHHhCCCCCCCeEEeEecChhh-----HHHhcCCCCCccccC
Q psy893 391 G-HHVCLLFTQFTPYKLAGDRDWTEEDKANYATNVFSSIEQYCPGFTQDIVGYEILTPPD-----LEKEFGLTGGNIFHG 464 (523)
Q Consensus 391 G-~~~i~~~~~~~p~~~~~~~~~~~~~k~~~~~~~~~~l~~~~P~~~~~i~~~~~~tP~~-----~~~~~~~~~G~~~g~ 464 (523)
| +.++..++. .+.. +.|.+..++++.+.+++.|++++|.- +.+|.+ |.+. ....|+..+
T Consensus 333 ~~~~~l~~~~~-~~~~----~~~~~~~~~~~~~~~l~~L~~~~~~~--------~~~p~~~~~~~W~~~-~~~~G~~~~- 397 (453)
T 2yg5_A 333 DDRGTLVAFVS-DEKA----DAMFELSAEERKATILASLARYLGPK--------AEEPVVYYESDWGSE-EWTRGCYAA- 397 (453)
T ss_dssp CSSEEEEEEEE-HHHH----HHHHHSCHHHHHHHHHHHHHHHHCGG--------GGCCSEEEECCTTTC-TTTCSSSCE-
T ss_pred CCCCEEEEEec-cHHH----HHHhcCCHHHHHHHHHHHHHHHhCcc--------CCCccEEEEeecCCC-CCCCCCCcC-
Confidence 4 445555542 1110 13434456888999999999998741 123333 3221 122444211
Q ss_pred cccccccccCCCCCCCCCCCCCCCCCCeEecCCCCC---CCCCCCCc--cHHHHHHHHHHHhc
Q psy893 465 ALSLNQLLFNRPLPIQGPSSPFTLIPHLLLCGSGAH---PGGGVCGA--PGYIAAQMVNRLMR 522 (523)
Q Consensus 465 ~~~~~q~~~~rp~~~~~~~~~~t~i~~LylaG~~~~---pg~g~~~a--sG~~aA~~i~~~~~ 522 (523)
...+.+....+| ..++|++||||||+++. +| +++|| ||.+||++|+++++
T Consensus 398 ~~~~g~~~~~~~-------~~~~p~~~l~~aG~~~~~~~~g-~v~gA~~SG~~aA~~i~~~l~ 452 (453)
T 2yg5_A 398 SFDLGGLHRYGA-------DSRTPVGPIHFSCSDIAAEGYQ-HVDGAVRMGQRTAADIIARSK 452 (453)
T ss_dssp EECTTHHHHHGG-------GTTCCBTTEEECCGGGCSTTTT-SHHHHHHHHHHHHHHHHHHC-
T ss_pred cCCCCccccchH-------HHhCCcCceEEeeccccccccc-chHHHHHHHHHHHHHHHHHhc
Confidence 111111111223 45778999999999973 43 68887 99999999999875
No 6
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=99.97 E-value=3.5e-30 Score=266.91 Aligned_cols=413 Identities=15% Similarity=0.153 Sum_probs=244.6
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCCCCcceeeecccCCceeccchhhhhhhhh---hhhccccccccCceEeecCCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHVLGGAAVTEEIIPGFQFSRASYLLSLLRP---HIYKDLELKKHGLKLLTRDPR 77 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~s~~~~~G~~~d~g~~~~~~~~~---~~~~~lgl~~~g~~~~~~~~~ 77 (523)
|||++||+||+.|+++|++|+|||+++++||+++|++ .+|+.+|.|++++....+ .+++++|+... +.....+.
T Consensus 23 G~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr~~t~~-~~g~~~~~g~~~~~~~~~~~~~~~~~~gl~~~-~~~~~~~~- 99 (478)
T 2ivd_A 23 GGGISGLAVAHHLRSRGTDAVLLESSARLGGAVGTHA-LAGYLVEQGPNSFLDREPATRALAAALNLEGR-IRAADPAA- 99 (478)
T ss_dssp CCBHHHHHHHHHHHTTTCCEEEECSSSSSBTTCCEEE-ETTEEEESSCCCEETTCHHHHHHHHHTTCGGG-EECSCSSC-
T ss_pred CCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceeeeec-cCCeeeecChhhhhhhhHHHHHHHHHcCCcce-eeecCccc-
Confidence 8999999999999999999999999999999999988 689999999988654333 56777776543 22111001
Q ss_pred CcccCCCCcccCCCCceeecCCHHHHHHHHHccChhhHHHHHHHHHHHHHHHhHHHhhhhcCCCChhhHHHHHHHhcccc
Q psy893 78 SYTPLSPDKWTNKAKSLTLGLDPQKNYEQIARFSVKDAQNFEKYDHHIEEITNLLDPLFDIAPHDFGNLLMYNLFTRRGE 157 (523)
Q Consensus 78 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (523)
....++. +|+.+.++.+...+... .+. . + ..... .+..++......
T Consensus 100 ~~~~~~~-----~g~~~~~p~~~~~~~~~--~~~--~---~---~~~~~----~~~~~~~~~~~~--------------- 145 (478)
T 2ivd_A 100 KRRYVYT-----RGRLRSVPASPPAFLAS--DIL--P---L---GARLR----VAGELFSRRAPE--------------- 145 (478)
T ss_dssp CCEEEEE-----TTEEEECCCSHHHHHTC--SSS--C---H---HHHHH----HHGGGGCCCCCT---------------
T ss_pred cceEEEE-----CCEEEECCCCHHHhccC--CCC--C---H---HHHHH----HhhhhhcCCCCC---------------
Confidence 1111111 15555555553321110 010 0 0 01111 111111111000
Q ss_pred HHHHHHHHhhcHHHHHHhhcCChHHHHHHhhhhh--ccCCCCCCCcchHHHH--HHH-----------Hhhcc-------
Q psy893 158 MKDVYSLLTCSAFSILNDWFESEPLKATLLTDGL--IGAMVSPHSPSTSYVL--LHH-----------VMGGA------- 215 (523)
Q Consensus 158 ~~~~~~~~~~s~~~~l~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~--~~~-----------~~~~~------- 215 (523)
....|+.+++.+.+.++.++.++..... ++ ..+.+.++.+.+ +.. +....
T Consensus 146 ------~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (478)
T 2ivd_A 146 ------GVDESLAAFGRRHLGHRATQVLLDAVQTGIYA--GDVEQLSVAATFPMLVKMEREHRSLILGAIRAQKAQRQAA 217 (478)
T ss_dssp ------TCCCBHHHHHHHHTCHHHHHHTHHHHHHHHHC--CCTTTBBHHHHCHHHHHHHHHHSSHHHHHHHHHHHHTCC-
T ss_pred ------CCCCCHHHHHHHhhCHHHHHHHHHHHhceeec--CCHHHhhHHHHhHHHHHHHHhcCcHHHHHHHhhhcccccc
Confidence 0124777888887776666655543321 22 345555433221 100 00000
Q ss_pred --cC-C----CCceeecCCCHHHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE----eCCeEEEcCEEEEcCC
Q psy893 216 --EG-V----KGAWAYPEGGMGAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV----TNGLEIKAKYVLSNTT 284 (523)
Q Consensus 216 --~~-~----~g~~~~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~----~~g~~~~ad~vI~a~~ 284 (523)
.. . .+. .+++||++.|+++|++.+ |++|+++++|++|..++ +++ .|+ .+|++++||+||+|++
T Consensus 218 ~~~~~~~~~~~~~-~~~~gG~~~l~~~l~~~l---g~~i~~~~~V~~i~~~~-~~~-~v~~~~~~~g~~~~ad~vV~a~~ 291 (478)
T 2ivd_A 218 LPAGTAPKLSGAL-STFDGGLQVLIDALAASL---GDAAHVGARVEGLARED-GGW-RLIIEEHGRRAELSVAQVVLAAP 291 (478)
T ss_dssp ---CCSCCCCCCE-EEETTCTHHHHHHHHHHH---GGGEESSEEEEEEECC---CC-EEEEEETTEEEEEECSEEEECSC
T ss_pred CcccccccccccE-EEECCCHHHHHHHHHHHh---hhhEEcCCEEEEEEecC-CeE-EEEEeecCCCceEEcCEEEECCC
Confidence 00 1 334 489999999999999977 67999999999999877 553 455 2667899999999999
Q ss_pred hHHHHHhhCCCCCCCHHHHHHHhcCCCCCCeEEEEEecCCCCcccCCCCCCCCCCCCCCcceEEeCCCCHHHHHHHHHHh
Q psy893 285 AKCTLLDLIPKGNLDERTTQAVQSIDYASPVTKINVALKSIPNFLADPNPSENTVQPHHHGSIHLNCEDMQQVFDAYQDA 364 (523)
Q Consensus 285 ~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 364 (523)
++.+ .+|+++ +++...+.++++.+. +++++++.++++. |. .+... .+++ ...
T Consensus 292 ~~~~-~~ll~~--l~~~~~~~l~~~~~~-~~~~v~l~~~~~~-~~----------~~~~~-~~~~-~~~----------- 343 (478)
T 2ivd_A 292 AHAT-AKLLRP--LDDALAALVAGIAYA-PIAVVHLGFDAGT-LP----------APDGF-GFLV-PAE----------- 343 (478)
T ss_dssp HHHH-HHHHTT--TCHHHHHHHHTCCBC-CEEEEEEEECTTS-SC----------CCCSS-EEEC-CGG-----------
T ss_pred HHHH-HHHhhc--cCHHHHHHHhcCCCC-cEEEEEEEEcccc-CC----------CCCce-EEEe-cCC-----------
Confidence 9985 577753 778888889998876 7899999998753 21 11111 1222 110
Q ss_pred hcCCCCCCCeEEEEcCCCCCCCCCCCCceEEEEEecccccCCCCCCCCCHHHHHHHHHHHHHHHHHhCCCCCCCeEEeEe
Q psy893 365 TQGIPSTRPMIEMVLPSSLDNTLSPPGHHVCLLFTQFTPYKLAGDRDWTEEDKANYATNVFSSIEQYCPGFTQDIVGYEI 444 (523)
Q Consensus 365 ~~g~~~~~~~~~v~~~s~~d~~~ap~G~~~i~~~~~~~p~~~~~~~~~~~~~k~~~~~~~~~~l~~~~P~~~~~i~~~~~ 444 (523)
...+...+.+++..++.++|+|+.++++++. .+. . ..|.+..++++.+.+++.|++++|... .++...+
T Consensus 344 -----~~~~~~~~~~~s~~~~~~~p~g~~~l~~~~~-~~~--~--~~~~~~~~~~~~~~~~~~l~~~~~~~~-~p~~~~~ 412 (478)
T 2ivd_A 344 -----EQRRMLGAIHASTTFPFRAEGGRVLYSCMVG-GAR--Q--PGLVEQDEDALAALAREELKALAGVTA-RPSFTRV 412 (478)
T ss_dssp -----GCCSCCEEEEHHHHCGGGBSTTCEEEEEEEE-CTT--C--GGGGGSCHHHHHHHHHHHHHHHHCCCS-CCSEEEE
T ss_pred -----CCCceEEEEEEcccCCCcCCCCCEEEEEEeC-CcC--C--ccccCCCHHHHHHHHHHHHHHHhCCCC-CCcEEEE
Confidence 0123344555555567778889887776653 211 1 124344678999999999999998653 2222111
Q ss_pred cChhhHHHhcCCCCCc-cccCcccccccccCCCCCCCCCCCCCCCCCCeEecCCCCCCCCCCCCc--cHHHHHHHHHHHh
Q psy893 445 LTPPDLEKEFGLTGGN-IFHGALSLNQLLFNRPLPIQGPSSPFTLIPHLLLCGSGAHPGGGVCGA--PGYIAAQMVNRLM 521 (523)
Q Consensus 445 ~tP~~~~~~~~~~~G~-~~g~~~~~~q~~~~rp~~~~~~~~~~t~i~~LylaG~~~~pg~g~~~a--sG~~aA~~i~~~~ 521 (523)
. .|. .+. .|..... ......++ ..++ ++|||+||+++ +|.|+++| ||+.||++|++.+
T Consensus 413 ~---~w~------~~~p~~~~g~~-~~~~~~~~-------~~~~-~~~l~~aG~~~-~g~gv~gA~~SG~~aA~~i~~~l 473 (478)
T 2ivd_A 413 F---RWP------LGIPQYNLGHL-ERVAAIDA-------ALQR-LPGLHLIGNAY-KGVGLNDCIRNAAQLADALVAGN 473 (478)
T ss_dssp E---EES------SCCBCCBTTHH-HHHHHHHH-------HHHT-STTEEECSTTT-SCCSHHHHHHHHHHHHHHHCC--
T ss_pred E---ECC------CcccCCCcCHH-HHHHHHHH-------HHhh-CCCEEEEccCC-CCCCHHHHHHHHHHHHHHHHHhh
Confidence 1 121 111 1222110 00100111 1122 68999999998 67789887 9999999998876
Q ss_pred c
Q psy893 522 R 522 (523)
Q Consensus 522 ~ 522 (523)
+
T Consensus 474 ~ 474 (478)
T 2ivd_A 474 T 474 (478)
T ss_dssp -
T ss_pred c
Confidence 4
No 7
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=99.96 E-value=3.3e-28 Score=249.30 Aligned_cols=319 Identities=14% Similarity=0.125 Sum_probs=200.1
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCCCCcceeeecccCC-ce-ec--------------cchhhhhhh------h---
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHVLGGAAVTEEIIPG-FQ-FS--------------RASYLLSLL------R--- 55 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~s~~~~~G-~~-~d--------------~g~~~~~~~------~--- 55 (523)
|||++||+||++|+++|++|+||||++++||++++++ .+| |. || .|.++.... .
T Consensus 18 GaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t~~-~~g~~~~~d~~~~~~~~~~~~~~~g~~~~~~l~P~~l~~~~~ 96 (453)
T 2bcg_G 18 GTGITECILSGLLSVDGKKVLHIDKQDHYGGEAASVT-LSQLYEKFKQNPISKEERESKFGKDRDWNVDLIPKFLMANGE 96 (453)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEC-HHHHHHHHCSSCCCHHHHHHHHCCGGGCCEESSCCBEETTSH
T ss_pred CcCHHHHHHHHHHHHCCCeEEEEeCCCCCCcccccee-ccchhceeccCCccccCcchhcccccceeeccccceeecCcH
Confidence 8999999999999999999999999999999999987 444 33 44 332221111 1
Q ss_pred -hhhhccccccccCceEeecCCCCcccCCCCcccCCCCceeecCC-HHHHHHHHHccChhhHHHHHHHHHHHHHHHhHHH
Q psy893 56 -PHIYKDLELKKHGLKLLTRDPRSYTPLSPDKWTNKAKSLTLGLD-PQKNYEQIARFSVKDAQNFEKYDHHIEEITNLLD 133 (523)
Q Consensus 56 -~~~~~~lgl~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (523)
..+++++|+.++ +++...++ .+. +.+ |+.+.++.+ .+.+...+..++ +...+.+|+..+.++..
T Consensus 97 l~~ll~~lg~~~~-l~~~~~~~-~~~-~~~------g~~~~~p~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~--- 162 (453)
T 2bcg_G 97 LTNILIHTDVTRY-VDFKQVSG-SYV-FKQ------GKIYKVPANEIEAISSPLMGIF--EKRRMKKFLEWISSYKE--- 162 (453)
T ss_dssp HHHHHHHHTGGGT-CCEEECCC-EEE-EET------TEEEECCSSHHHHHHCTTSCHH--HHHHHHHHHHHHHHCBT---
T ss_pred HHHHHHhcCCccc-eEEEEccc-eeE-EeC------CeEEECCCChHHHHhhhccchh--hHHHHHHHHHHHHHhcc---
Confidence 156778887665 67766553 222 212 777777777 554443332221 34445555444433211
Q ss_pred hhhhcCCCChhhHHHHHHHhccccHHHHHHHHhhcHHHHHHhhcCChHHHHHHhhhhhccCCCCCCCcchHHHH---HHH
Q psy893 134 PLFDIAPHDFGNLLMYNLFTRRGEMKDVYSLLTCSAFSILNDWFESEPLKATLLTDGLIGAMVSPHSPSTSYVL---LHH 210 (523)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 210 (523)
..+ ..+ ... .....|+.+++++++.++.++.++...............+....+ ..+
T Consensus 163 ----~~p---~~~------~~~-------~~~~~s~~~~l~~~~~~~~l~~~l~~~~~l~~~~~~~~~p~~~~~~~~~~~ 222 (453)
T 2bcg_G 163 ----DDL---STH------QGL-------DLDKNTMDEVYYKFGLGNSTKEFIGHAMALWTNDDYLQQPARPSFERILLY 222 (453)
T ss_dssp ----TBG---GGS------TTC-------CTTTSBHHHHHHHTTCCHHHHHHHHHHTSCCSSSGGGGSBHHHHHHHHHHH
T ss_pred ----CCc---hhh------hcc-------ccccCCHHHHHHHhCCCHHHHHHHHHHHHhccCccccCCchHHHHHHHHHH
Confidence 000 000 000 012468889999999999999988654322110000001222222 222
Q ss_pred HhhcccCCCCceeecCCCHHHHHHHHHHHHHHCCcEEEeCceeeEEEEC--CCCCeEEEEeCCeEEEcCEEEEcCChHHH
Q psy893 211 VMGGAEGVKGAWAYPEGGMGAVSQALARSAQASGAQLFTSQTVTEITLD--SDKRASGVVTNGLEIKAKYVLSNTTAKCT 288 (523)
Q Consensus 211 ~~~~~~~~~g~~~~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~--~~~~~~~v~~~g~~~~ad~vI~a~~~~~~ 288 (523)
......+..+.|.+|+||++.|+++|++.+++.|++|+++++|++|..+ + +++++|+.+|+++.||+||+|++++.
T Consensus 223 ~~s~~~~~~~~~~~p~gG~~~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~-~~~~~V~~~g~~~~ad~VV~a~~~~~- 300 (453)
T 2bcg_G 223 CQSVARYGKSPYLYPMYGLGELPQGFARLSAIYGGTYMLDTPIDEVLYKKDT-GKFEGVKTKLGTFKAPLVIADPTYFP- 300 (453)
T ss_dssp HHHHHHHSSCSEEEETTCTTHHHHHHHHHHHHTTCEEECSCCCCEEEEETTT-TEEEEEEETTEEEECSCEEECGGGCG-
T ss_pred HHHHHhhcCCceEeeCCCHHHHHHHHHHHHHHcCCEEECCCEEEEEEEECCC-CeEEEEEECCeEEECCEEEECCCccc-
Confidence 2211112245566899999999999999999999999999999999987 6 77777776788999999999999874
Q ss_pred HHhhCCCCCCCHHHHHHHhcCC-CCCCeEEEEEecCCCCcccCCCCCCCCCCCCCCcceEEeCCCCHHHHHHHHHHhhcC
Q psy893 289 LLDLIPKGNLDERTTQAVQSID-YASPVTKINVALKSIPNFLADPNPSENTVQPHHHGSIHLNCEDMQQVFDAYQDATQG 367 (523)
Q Consensus 289 ~~~ll~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g 367 (523)
.++ .+.. ++.+.+++ ++++..+. ....+| ++.+ .. +
T Consensus 301 -~~l--------------~~~~~~~~~~~~i---~~~~~~~~--------~~~~~~--~ii~-~~--------------~ 337 (453)
T 2bcg_G 301 -EKC--------------KSTGQRVIRAICI---LNHPVPNT--------SNADSL--QIII-PQ--------------S 337 (453)
T ss_dssp -GGE--------------EEEEEEEEEEEEE---ESSCCTTS--------TTCSSE--EEEE-CG--------------G
T ss_pred -hhh--------------cccCCcceeEEEE---EccccCCC--------CCCccE--EEEe-Cc--------------c
Confidence 222 1122 33344444 56543211 012233 5555 21 1
Q ss_pred CCCCCCeEEEEcCCCCCCCCCCCCceEEEEEec
Q psy893 368 IPSTRPMIEMVLPSSLDNTLSPPGHHVCLLFTQ 400 (523)
Q Consensus 368 ~~~~~~~~~v~~~s~~d~~~ap~G~~~i~~~~~ 400 (523)
.++++|+++++.+|..| ++||+|+++++++++
T Consensus 338 ~~~~~~~~~v~~~s~~d-~~aP~G~~~~~v~~~ 369 (453)
T 2bcg_G 338 QLGRKSDIYVAIVSDAH-NVCSKGHYLAIISTI 369 (453)
T ss_dssp GTTCSSCEEEEEEEGGG-TSSCTTCEEEEEEEE
T ss_pred ccCCCCCEEEEEeCCCC-CCCCCCcEEEEEEEe
Confidence 23456899999999888 899999999887764
No 8
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=99.95 E-value=2.5e-27 Score=246.38 Aligned_cols=418 Identities=15% Similarity=0.106 Sum_probs=238.2
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCCCCcceeeecccCCceeccchhhhhhhhhhh---hccccccccCceEeecC--
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHVLGGAAVTEEIIPGFQFSRASYLLSLLRPHI---YKDLELKKHGLKLLTRD-- 75 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~s~~~~~G~~~d~g~~~~~~~~~~~---~~~lgl~~~g~~~~~~~-- 75 (523)
|||++||+||++|+++|++|+|||+++++||+++|.+ .+|+.+|.|++++....+.+ ++++|+.+. +....
T Consensus 46 GaG~aGl~aA~~l~~~g~~v~v~E~~~~~GGr~~t~~-~~g~~~d~G~~~~~~~~~~~~~~l~~lgl~~~---~~~~~~~ 121 (495)
T 2vvm_A 46 GGGYCGLTATRDLTVAGFKTLLLEARDRIGGRSWSSN-IDGYPYEMGGTWVHWHQSHVWREITRYKMHNA---LSPSFNF 121 (495)
T ss_dssp CCBHHHHHHHHHHHHTTCCEEEECSSSBSBTTCCEEE-ETTEEEECSCCCBCTTSHHHHHHHHHTTCTTC---EEESCCC
T ss_pred CCcHHHHHHHHHHHHCCCCEEEEeCCCCCCCcceecc-cCCeeecCCCeEecCccHHHHHHHHHcCCcce---eeccccc
Confidence 8999999999999999999999999999999999987 68999999999876555544 444555322 22221
Q ss_pred CCCc-ccCCCCcccCCCCceeecCCHHHHHHHHHccChhhHHHHHHHHHHHHHHHh----HHHhhhhcCCCChhhHHHHH
Q psy893 76 PRSY-TPLSPDKWTNKAKSLTLGLDPQKNYEQIARFSVKDAQNFEKYDHHIEEITN----LLDPLFDIAPHDFGNLLMYN 150 (523)
Q Consensus 76 ~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 150 (523)
.... ..++.+ ..+....++ ..+. ...+...+.++.+ ....++..+..+..
T Consensus 122 ~~~~~~~~~~~---~~g~~~~~~--------------~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 176 (495)
T 2vvm_A 122 SRGVNHFQLRT---NPTTSTYMT--------------HEAE--DELLRSALHKFTNVDGTNGRTVLPFPHDMFY------ 176 (495)
T ss_dssp SSSCCEEEEES---STTCCEEEC--------------HHHH--HHHHHHHHHHHHCSSSSTTTTTCSCTTSTTS------
T ss_pred CCCceEEEecC---CCCceeecC--------------HHHH--HHHHHHHHHHHHccchhhhhhcCCCCCCccc------
Confidence 1000 000000 001111111 1000 0011111122221 01111111100000
Q ss_pred HHhccccHHHHHHHHhhcHHHHHHhhc--CChHHHHHHhhhhhccCCCCCCCcchHHHHHHHHhhcc-----cCCCCcee
Q psy893 151 LFTRRGEMKDVYSLLTCSAFSILNDWF--ESEPLKATLLTDGLIGAMVSPHSPSTSYVLLHHVMGGA-----EGVKGAWA 223 (523)
Q Consensus 151 ~~~~~~~~~~~~~~~~~s~~~~l~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~g~~~ 223 (523)
.. .+..+...|+.+++.++. .++.++.++...........+.+.+....+........ ....+.+
T Consensus 177 ----~~---~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~- 248 (495)
T 2vvm_A 177 ----VP---EFRKYDEMSYSERIDQIRDELSLNERSSLEAFILLCSGGTLENSSFGEFLHWWAMSGYTYQGCMDCLMSY- 248 (495)
T ss_dssp ----ST---THHHHHTSBHHHHHHHHGGGCCHHHHHHHHHHHHHHHSSCTTTSBHHHHHHHHHHTTSSHHHHHHHHHSE-
T ss_pred ----Cc---chhhhhhhhHHHHHHHhhccCCHHHHHHHHHHHHHhcCCCcchhhHHHHHHHHHHcCCCHHHHHhhhceE-
Confidence 00 112334578899998876 56777766654432111134555544333222111100 0112345
Q ss_pred ecCCCHHHHHHHHHHHHHHCC-cEEEeCceeeEEEECCCCCeEEEE-eCCeEEEcCEEEEcCChHHHHHhhCCCCCCCHH
Q psy893 224 YPEGGMGAVSQALARSAQASG-AQLFTSQTVTEITLDSDKRASGVV-TNGLEIKAKYVLSNTTAKCTLLDLIPKGNLDER 301 (523)
Q Consensus 224 ~~~gG~~~l~~~l~~~~~~~G-~~i~~~~~V~~I~~~~~~~~~~v~-~~g~~~~ad~vI~a~~~~~~~~~ll~~~~~~~~ 301 (523)
+++||++.++++|.+.+++.| ++|+++++|++|..++ +++ .|+ .+|++++||+||+|+++..+ .++...+.+|+.
T Consensus 249 ~~~gG~~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~~-~~v-~v~~~~g~~~~ad~vI~a~~~~~l-~~i~~~p~lp~~ 325 (495)
T 2vvm_A 249 KFKDGQSAFARRFWEEAAGTGRLGYVFGCPVRSVVNER-DAA-RVTARDGREFVAKRVVCTIPLNVL-STIQFSPALSTE 325 (495)
T ss_dssp EETTCHHHHHHHHHHHHHTTTCEEEESSCCEEEEEECS-SSE-EEEETTCCEEEEEEEEECCCGGGG-GGSEEESCCCHH
T ss_pred EeCCCHHHHHHHHHHHhhhcCceEEEeCCEEEEEEEcC-CEE-EEEECCCCEEEcCEEEECCCHHHH-hheeeCCCCCHH
Confidence 789999999999999999998 9999999999999876 554 466 67778999999999999985 566544568888
Q ss_pred HHHHHhcCCCCCCeEEEEEecCCCCcccCCCCCCCCCCCCCCcceEEeCCCCHHHHHHHHHHhhcCCCCCCCeEEEEcCC
Q psy893 302 TTQAVQSIDYASPVTKINVALKSIPNFLADPNPSENTVQPHHHGSIHLNCEDMQQVFDAYQDATQGIPSTRPMIEMVLPS 381 (523)
Q Consensus 302 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~~~s 381 (523)
..+.++++.+. ++.+|++.++++. |. . +..+...+ .+..++.
T Consensus 326 ~~~ai~~~~~~-~~~kv~l~~~~~~-~~------------~---~~g~~~~~------------------~~~~~~~--- 367 (495)
T 2vvm_A 326 RISAMQAGHVS-MCTKVHAEVDNKD-MR------------S---WTGIAYPF------------------NKLCYAI--- 367 (495)
T ss_dssp HHHHHHHCCCC-CCEEEEEEESCGG-GG------------G---EEEEECSS------------------CSSCEEE---
T ss_pred HHHHHHhcCCC-ceeEEEEEECCcc-CC------------C---ceeEecCC------------------CCcEEEe---
Confidence 88889888765 7789999998642 20 0 11110111 1211111
Q ss_pred CCCCCCCCCCceEEEEEecccccCCCCCCCCCHHHHHHHHHHHHHHHHHhCCCCCCCeEEeEecChhhHHHhcCCCCCcc
Q psy893 382 SLDNTLSPPGHHVCLLFTQFTPYKLAGDRDWTEEDKANYATNVFSSIEQYCPGFTQDIVGYEILTPPDLEKEFGLTGGNI 461 (523)
Q Consensus 382 ~~d~~~ap~G~~~i~~~~~~~p~~~~~~~~~~~~~k~~~~~~~~~~l~~~~P~~~~~i~~~~~~tP~~~~~~~~~~~G~~ 461 (523)
+....|+|+.++..++. .. . .+.+ ++..+.+++.|++++|+.. .+....+. .|.+.. ...|+.
T Consensus 368 --~~~~~~~~~~vl~~~~~-~~---~---~~~~---~e~~~~~~~~L~~~~~~~~-~~~~~~~~---~W~~dp-~~~g~y 430 (495)
T 2vvm_A 368 --GDGTTPAGNTHLVCFGN-SA---N---HIQP---DEDVRETLKAVGQLAPGTF-GVKRLVFH---NWVKDE-FAKGAW 430 (495)
T ss_dssp --EEEECTTSCEEEEEEEC-ST---T---CCCT---TTCHHHHHHHHHTTSTTSC-CEEEEEEC---CTTTCT-TTSSSS
T ss_pred --cCCCCCCCCeEEEEEeC-cc---c---cCCC---HHHHHHHHHHHHHhcCCCC-CceEEEEe---EcCCCC-CCCCCc
Confidence 11124567666655542 11 0 1211 2335667888999888632 23322221 343211 112332
Q ss_pred ccCcccccccccCCCCCCCCCCCCCCCCCCeEecCCCCCC--CCCCCCc--cHHHHHHHHHHHhc
Q psy893 462 FHGALSLNQLLFNRPLPIQGPSSPFTLIPHLLLCGSGAHP--GGGVCGA--PGYIAAQMVNRLMR 522 (523)
Q Consensus 462 ~g~~~~~~q~~~~rp~~~~~~~~~~t~i~~LylaG~~~~p--g~g~~~a--sG~~aA~~i~~~~~ 522 (523)
.. ..+.+....++ ..++|++||||||+++.+ .+.+.|| ||.+||++|++.++
T Consensus 431 -~~-~~~g~~~~~~~-------~l~~p~~~l~fAGe~t~~~~~g~veGAi~SG~raA~~i~~~l~ 486 (495)
T 2vvm_A 431 -FF-SRPGMVSECLQ-------GLREKHGGVVFANSDWALGWRSFIDGAIEEGTRAARVVLEELG 486 (495)
T ss_dssp -CC-CCTTHHHHHHH-------HHHCCBTTEEECCGGGCSSSTTSHHHHHHHHHHHHHHHHHHHC
T ss_pred -cC-cCCCcchhhHH-------HHhCcCCCEEEechhhhcCCceEEEhHHHHHHHHHHHHHHHhc
Confidence 10 11111100112 235578999999999853 2345677 99999999999874
No 9
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=99.95 E-value=3.5e-29 Score=261.07 Aligned_cols=422 Identities=16% Similarity=0.164 Sum_probs=241.6
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCCCCcceeeecccCCceeccchhhhhhhhh---hhhccccccccCceEeecCCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHVLGGAAVTEEIIPGFQFSRASYLLSLLRP---HIYKDLELKKHGLKLLTRDPR 77 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~s~~~~~G~~~d~g~~~~~~~~~---~~~~~lgl~~~g~~~~~~~~~ 77 (523)
|||++||+||++|+++|++|+|||+++++||+++++. .+|+.+|.|++++....+ .+++++|+... +.+.. ..
T Consensus 20 G~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~-~~g~~~~~g~~~~~~~~~~~~~~~~~lgl~~~-~~~~~-~~- 95 (504)
T 1sez_A 20 GAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKLRSVS-QDGLIWDEGANTMTESEGDVTFLIDSLGLREK-QQFPL-SQ- 95 (504)
T ss_dssp CCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSCCEEE-ETTEEEESSCCCBCCCSHHHHHHHHHTTCGGG-EECCS-SC-
T ss_pred CCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCceeeec-cCCeEEecCCcccccCcHHHHHHHHHcCCccc-ceecc-CC-
Confidence 8999999999999999999999999999999999987 689999999988654333 57788887643 22211 11
Q ss_pred CcccCCCCcccCCCCceeecCCHHHHHHHHHccChhhHHHHHHHHHHHHHHHhHHHhhhhcCCCChhhHHHHHHHhcccc
Q psy893 78 SYTPLSPDKWTNKAKSLTLGLDPQKNYEQIARFSVKDAQNFEKYDHHIEEITNLLDPLFDIAPHDFGNLLMYNLFTRRGE 157 (523)
Q Consensus 78 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (523)
....++. +|+.+.++.+...+... .+.. ... .+..+ ...+....... .
T Consensus 96 ~~~~~~~-----~g~~~~~p~~~~~~~~~--~~~~-~~~-------~~~~~---~~~~~~~~~~~-~------------- 143 (504)
T 1sez_A 96 NKRYIAR-----NGTPVLLPSNPIDLIKS--NFLS-TGS-------KLQML---LEPILWKNKKL-S------------- 143 (504)
T ss_dssp CCEEEES-----SSSEEECCSSHHHHHHS--SSSC-HHH-------HHHHH---THHHHC--------------------
T ss_pred CceEEEE-----CCeEEECCCCHHHHhcc--ccCC-HHH-------HHHHh---HhhhccCcccc-c-------------
Confidence 1111112 26666666654332210 1110 000 01001 11111100000 0
Q ss_pred HHHHHHHHhhcHHHHHHhhcCChHHHHHHhhhhh--ccCCCCCCCcchHHHH--HHHH-----------h-hccc-----
Q psy893 158 MKDVYSLLTCSAFSILNDWFESEPLKATLLTDGL--IGAMVSPHSPSTSYVL--LHHV-----------M-GGAE----- 216 (523)
Q Consensus 158 ~~~~~~~~~~s~~~~l~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~--~~~~-----------~-~~~~----- 216 (523)
. ......|+.+|+.+++.++.++.++..... ++ ..|.+.++...+ ++.+ + ....
T Consensus 144 --~-~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~s~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 218 (504)
T 1sez_A 144 --Q-VSDSHESVSGFFQRHFGKEVVDYLIDPFVAGTCG--GDPDSLSMHHSFPELWNLEKRFGSVILGAIRSKLSPKNEK 218 (504)
T ss_dssp -------CCCBHHHHHHHHHCHHHHHTTHHHHHHHHHS--CCGGGSBHHHHCHHHHHHHHHTSCHHHHHHHHTTC-----
T ss_pred --c-cCCCCccHHHHHHHHcCHHHHHHHHHHHHccccC--CChHHhhHHHHhHHHHHHHHHhCCHHHHHHHhhhcccccc
Confidence 0 001235888888888877777666653321 22 244444332211 1110 0 0000
Q ss_pred ------------CCCCceeecCCCHHHHHHHHHHHHHHCC-cEEEeCceeeEEEECCCCCe-----EEEE-e--CC---e
Q psy893 217 ------------GVKGAWAYPEGGMGAVSQALARSAQASG-AQLFTSQTVTEITLDSDKRA-----SGVV-T--NG---L 272 (523)
Q Consensus 217 ------------~~~g~~~~~~gG~~~l~~~l~~~~~~~G-~~i~~~~~V~~I~~~~~~~~-----~~v~-~--~g---~ 272 (523)
...+.+ +++||++.|+++|++.+ + ++|++|++|++|..++ ++. +.|+ . +| +
T Consensus 219 ~~~~~~~~~~~~~~~~~~-~~~GG~~~l~~~l~~~l---~~~~i~~~~~V~~I~~~~-~~~~~~~~~~v~~~~~~g~~~~ 293 (504)
T 1sez_A 219 KQGPPKTSANKKRQRGSF-SFLGGMQTLTDAICKDL---REDELRLNSRVLELSCSC-TEDSAIDSWSIISASPHKRQSE 293 (504)
T ss_dssp -----CCCSCCSTTCSCB-EETTCTHHHHHHHHTTS---CTTTEETTCCEEEEEEEC-SSSSSSCEEEEEEBCSSSSCBC
T ss_pred cccccchhhccccCCceE-eeCcHHHHHHHHHHhhc---ccceEEcCCeEEEEEecC-CCCcccceEEEEEcCCCCccce
Confidence 012344 78999999999999854 4 7899999999999877 541 4455 3 45 5
Q ss_pred EEEcCEEEEcCChHHHHHhhCCC---CCCCHHHHHHHhcCCCCCCeEEEEEecCCCCcccCCCCCCCCCCCCCCcceEEe
Q psy893 273 EIKAKYVLSNTTAKCTLLDLIPK---GNLDERTTQAVQSIDYASPVTKINVALKSIPNFLADPNPSENTVQPHHHGSIHL 349 (523)
Q Consensus 273 ~~~ad~vI~a~~~~~~~~~ll~~---~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 349 (523)
+++||+||+|+|+..+ .+++.+ ..+++.. +.++.+. ++.+|++.++++. |. .+...+ .+++
T Consensus 294 ~~~ad~VI~a~p~~~l-~~ll~~~~~~~~~~~~---l~~~~~~-~~~~v~l~~~~~~-~~--------~~~~~~--~~l~ 357 (504)
T 1sez_A 294 EESFDAVIMTAPLCDV-KSMKIAKRGNPFLLNF---IPEVDYV-PLSVVITTFKREN-VK--------YPLEGF--GVLV 357 (504)
T ss_dssp CCEESEEEECSCHHHH-HTSEEESSSSBCCCTT---SCCCCEE-EEEEEEEEEEGGG-BS--------SCCCSS--EEEC
T ss_pred eEECCEEEECCCHHHH-HHHhhcccCCcccHHH---HhcCCCC-ceEEEEEEEchhh-cC--------CCCCce--EEEc
Confidence 7899999999999986 467621 1233322 4555554 7889999998653 21 112223 4544
Q ss_pred CCCCHHHHHHHHHHhhcCCCCCCCeEEEEcCCCCCCCCCCCCceEEEEEecccccCCCCCCCCCHHHHHHHHHHHHHHHH
Q psy893 350 NCEDMQQVFDAYQDATQGIPSTRPMIEMVLPSSLDNTLSPPGHHVCLLFTQFTPYKLAGDRDWTEEDKANYATNVFSSIE 429 (523)
Q Consensus 350 ~~~~~~~~~~~~~~~~~g~~~~~~~~~v~~~s~~d~~~ap~G~~~i~~~~~~~p~~~~~~~~~~~~~k~~~~~~~~~~l~ 429 (523)
.+. +. ..| .+...+.++|..+|..+|+|+.+++.++. .+. + ..|....++++.+.+++.|+
T Consensus 358 -~~~-~~--------~~g----~~~~~~~~~s~~~~~~~p~g~~~l~~~~~-g~~--~--~~~~~~~~ee~~~~v~~~L~ 418 (504)
T 1sez_A 358 -PSK-EQ--------QHG----LKTLGTLFSSMMFPDRAPNNVYLYTTFVG-GSR--N--RELAKASRTELKEIVTSDLK 418 (504)
T ss_dssp -CGG-GG--------GGT----CCSSEEEEHHHHCGGGSCTTEEEEEEEEE-STT--C--GGGTTCCHHHHHHHHHHHHH
T ss_pred -CCC-CC--------CCC----CccceEEeeccccCCcCCCCCEEEEEEeC-CCC--c--ccccCCCHHHHHHHHHHHHH
Confidence 221 10 001 12223344455677778999887766653 111 1 13444456889999999999
Q ss_pred HhCCCCCCCeEEeEecChhhHHHhcCCCCCccccCcccccccccCCCCCCCCCCCCCCCCCCeEecCCCCCCCCCCCCc-
Q psy893 430 QYCPGFTQDIVGYEILTPPDLEKEFGLTGGNIFHGALSLNQLLFNRPLPIQGPSSPFTLIPHLLLCGSGAHPGGGVCGA- 508 (523)
Q Consensus 430 ~~~P~~~~~i~~~~~~tP~~~~~~~~~~~G~~~g~~~~~~q~~~~rp~~~~~~~~~~t~i~~LylaG~~~~pg~g~~~a- 508 (523)
+++|.-. .++...+. .|.+- .+...+.+.. ....+ + ...++++|||+||++++ |.|+++|
T Consensus 419 ~~~g~~~-~p~~~~~~---~w~~~--~p~~~~g~~~-~~~~~---~--------~~~~~~~~l~~aG~~~~-g~~v~gai 479 (504)
T 1sez_A 419 QLLGAEG-EPTYVNHL---YWSKA--FPLYGHNYDS-VLDAI---D--------KMEKNLPGLFYAGNHRG-GLSVGKAL 479 (504)
T ss_dssp HHHCBCS-CCSSEEEE---EEEEE--EECCCTTHHH-HHHHH---H--------HHHHHSTTEEECCSSSS-CSSHHHHH
T ss_pred HHhCCCC-CCeEEEEe---ECCCC--CCccCcCHHH-HHHHH---H--------HHHHhCCCEEEEeecCC-CCCHHHHH
Confidence 9987522 22111111 12111 0111111100 01110 0 23457899999999985 6778887
Q ss_pred -cHHHHHHHHHHHhc
Q psy893 509 -PGYIAAQMVNRLMR 522 (523)
Q Consensus 509 -sG~~aA~~i~~~~~ 522 (523)
||++||++|+++++
T Consensus 480 ~sG~~aA~~il~~l~ 494 (504)
T 1sez_A 480 SSGCNAADLVISYLE 494 (504)
T ss_dssp HHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHh
Confidence 99999999999874
No 10
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.95 E-value=5.7e-27 Score=242.23 Aligned_cols=423 Identities=11% Similarity=0.104 Sum_probs=231.9
Q ss_pred CCChhHHHHHHHHHHcC------CcEEEEccCCCCCcceeeecccCCceeccchhhhhhhhh---hhhccccccccCceE
Q psy893 1 EAGHNGLVSAAYLARAG------LSVAVLERRHVLGGAAVTEEIIPGFQFSRASYLLSLLRP---HIYKDLELKKHGLKL 71 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G------~~V~vlE~~~~~GG~~~s~~~~~G~~~d~g~~~~~~~~~---~~~~~lgl~~~g~~~ 71 (523)
|||++||+||++|+++| ++|+|||+++++||++++.. .+|+.+|.|++++....+ .+++++|++.. +.
T Consensus 12 GaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG~~~s~~-~~g~~~d~G~~~~~~~~~~~~~l~~~lgl~~~-~~- 88 (470)
T 3i6d_A 12 GGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGGKIQTVK-KDGYIIERGPDSFLERKKSAPQLVKDLGLEHL-LV- 88 (470)
T ss_dssp CCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCTTCCEEC-CTTCCEESSCCCEETTCTHHHHHHHHTTCCTT-EE-
T ss_pred CCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCceEEEec-cCCEEeccChhhhhhCCHHHHHHHHHcCCcce-ee-
Confidence 89999999999999999 99999999999999999987 689999999877544444 56778877643 21
Q ss_pred eecCCCCcccCCCCcccCCCCceeecCCHH-HHHHHHHccChhhHHHHHHHHHHHHHHHhHHHhhhhcCCCChhhHHHHH
Q psy893 72 LTRDPRSYTPLSPDKWTNKAKSLTLGLDPQ-KNYEQIARFSVKDAQNFEKYDHHIEEITNLLDPLFDIAPHDFGNLLMYN 150 (523)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (523)
..... ...++.+ +....++.+.. .....+..+... .+.....++.... ..+......
T Consensus 89 -~~~~~-~~~~~~~-----g~~~~~~~~~~~~~p~~~~~~~~~------~~~~~~~~~~~~~-~~~~~~~~~-------- 146 (470)
T 3i6d_A 89 -NNATG-QSYVLVN-----RTLHPMPKGAVMGIPTKIAPFVST------GLFSLSGKARAAM-DFILPASKT-------- 146 (470)
T ss_dssp -ECCCC-CEEEECS-----SCEEECCC---------------------------CCSHHHHH-HHHSCCCSS--------
T ss_pred -cCCCC-ccEEEEC-----CEEEECCCCcccCCcCchHHhhcc------CcCCHHHHHHHhc-CcccCCCCC--------
Confidence 11010 0111111 33333332210 000000000000 0000000000000 000000000
Q ss_pred HHhccccHHHHHHHHhhcHHHHHHhhcCChHHHHHHhhhhhccCCCCCCCcchHHHHHHH---------Hhhcc------
Q psy893 151 LFTRRGEMKDVYSLLTCSAFSILNDWFESEPLKATLLTDGLIGAMVSPHSPSTSYVLLHH---------VMGGA------ 215 (523)
Q Consensus 151 ~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~------ 215 (523)
....++.+++.+.+..+..+.++...........+.+.+....+... .....
T Consensus 147 -------------~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (470)
T 3i6d_A 147 -------------KDDQSLGEFFRRRVGDEVVENLIEPLLSGIYAGDIDKLSLMSTFPQFYQTEQKHRSLILGMKKTRPQ 213 (470)
T ss_dssp -------------SSCCBHHHHHHHHSCHHHHHHTHHHHHHHTTCSCTTTBBHHHHCGGGCC------------------
T ss_pred -------------CCCcCHHHHHHHhcCHHHHHHhccchhcEEecCCHHHhhHHHHHHHHHHHHHhcCcHHHHHHhhccc
Confidence 01246677777766655555444332210001233333222111000 00000
Q ss_pred -------cCCCCceeecCCCHHHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-eCCeEEEcCEEEEcCChHH
Q psy893 216 -------EGVKGAWAYPEGGMGAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-TNGLEIKAKYVLSNTTAKC 287 (523)
Q Consensus 216 -------~~~~g~~~~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~~g~~~~ad~vI~a~~~~~ 287 (523)
....+.+.+++||++.|++.|++.+.+ ++|+++++|++|..++ +++ .|+ .+|++++||+||+|+|++.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~--~~i~~~~~V~~i~~~~-~~~-~v~~~~g~~~~ad~vi~a~p~~~ 289 (470)
T 3i6d_A 214 GSGQQLTAKKQGQFQTLSTGLQTLVEEIEKQLKL--TKVYKGTKVTKLSHSG-SCY-SLELDNGVTLDADSVIVTAPHKA 289 (470)
T ss_dssp -------------EEEETTCTHHHHHHHHHTCCS--EEEECSCCEEEEEECS-SSE-EEEESSSCEEEESEEEECSCHHH
T ss_pred cccccccccCCceEEEeCChHHHHHHHHHHhcCC--CEEEeCCceEEEEEcC-CeE-EEEECCCCEEECCEEEECCCHHH
Confidence 000123447899999999999997754 7999999999999987 654 476 7888899999999999998
Q ss_pred HHHhhCCCCCCCHHHHHHHhcCCCCCCeEEEEEecCCCCcccCCCCCCCCCCCCCCcceEEeCCCCHHHHHHHHHHhhcC
Q psy893 288 TLLDLIPKGNLDERTTQAVQSIDYASPVTKINVALKSIPNFLADPNPSENTVQPHHHGSIHLNCEDMQQVFDAYQDATQG 367 (523)
Q Consensus 288 ~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g 367 (523)
+ .+|+.+.. ..+.++++.+. ++.++++.++++. |. .+.. .. .+.+ ..+
T Consensus 290 ~-~~l~~~~~----~~~~~~~~~~~-~~~~v~l~~~~~~-~~--------~~~~-~~-g~l~-~~~-------------- 337 (470)
T 3i6d_A 290 A-AGMLSELP----AISHLKNMHST-SVANVALGFPEGS-VQ--------MEHE-GT-GFVI-SRN-------------- 337 (470)
T ss_dssp H-HHHTTTST----THHHHHTCEEE-EEEEEEEEESSTT-CC--------CSSC-SS-EEEE-CST--------------
T ss_pred H-HHHcCCch----hhHHHhcCCCC-ceEEEEEEECchh-cC--------CCCC-Ce-EEEc-cCC--------------
Confidence 6 57776532 35677777765 7889999998753 21 1111 11 2223 221
Q ss_pred CCCCCCeEEEEcCCCCCCCCCCCCceEEEEEecccccCCCCCCCCCHHHHHHHHHHHHHHHHHhCCCCCCCeEEeEecCh
Q psy893 368 IPSTRPMIEMVLPSSLDNTLSPPGHHVCLLFTQFTPYKLAGDRDWTEEDKANYATNVFSSIEQYCPGFTQDIVGYEILTP 447 (523)
Q Consensus 368 ~~~~~~~~~v~~~s~~d~~~ap~G~~~i~~~~~~~p~~~~~~~~~~~~~k~~~~~~~~~~l~~~~P~~~~~i~~~~~~tP 447 (523)
...+...+++.|...+..+|+|+.++.+++. .+. ...+.+...+++.+.+++.|++++|... .++...+.
T Consensus 338 --~~~~~~~~~~~s~~~~~~~p~~~~~l~~~~~-~~~----~~~~~~~~~~~~~~~~~~~l~~~~g~~~-~p~~~~~~-- 407 (470)
T 3i6d_A 338 --SDFAITACTWTNKKWPHAAPEGKTLLRAYVG-KAG----DESIVDLSDNDIINIVLEDLKKVMNING-EPEMTCVT-- 407 (470)
T ss_dssp --TCCSEEEEEEHHHHCGGGSCTTCEEEEEEEC-CSS----CCGGGTSCHHHHHHHHHHHHGGGSCCCS-CCSEEEEE--
T ss_pred --CCCCceEEEEEcCcCCCcCCCCCEEEEEEEC-CCC----CccccCCCHHHHHHHHHHHHHHHhCCCC-CceEEEEE--
Confidence 0123334444444456668888877766642 221 1123333568899999999999997543 22211111
Q ss_pred hhHHHhcCCCCCccccCcccccccccCCCCCCCCCCCCCCCCCCeEecCCCCCCCCCCCCc--cHHHHHHHHHHHhc
Q psy893 448 PDLEKEFGLTGGNIFHGALSLNQLLFNRPLPIQGPSSPFTLIPHLLLCGSGAHPGGGVCGA--PGYIAAQMVNRLMR 522 (523)
Q Consensus 448 ~~~~~~~~~~~G~~~g~~~~~~q~~~~rp~~~~~~~~~~t~i~~LylaG~~~~pg~g~~~a--sG~~aA~~i~~~~~ 522 (523)
.|..-. +. |...+ ..+....++ ...++++|||+||+++ .|.|+++| ||+.||++|++++-
T Consensus 408 -~w~~a~--p~---~~~g~-~~~~~~~~~-------~l~~~~~~l~~aG~~~-~g~gv~~a~~sG~~aA~~i~~~l~ 469 (470)
T 3i6d_A 408 -RWHESM--PQ---YHVGH-KQRIKELRE-------ALASAYPGVYMTGASF-EGVGIPDCIDQGKAAVSDALTYLF 469 (470)
T ss_dssp -EEEEEE--EE---CBTTH-HHHHHHHHH-------HHHHHSTTEEECSTTT-SCCSHHHHHHHHHHHHHHHHHHHC
T ss_pred -EcCCcc--CC---CCCCH-HHHHHHHHH-------HHHhhCCCEEEEeecC-CCCCHHHHHHHHHHHHHHHHHHhh
Confidence 121100 00 10000 001101111 1234678999999997 46788887 99999999998873
No 11
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=99.94 E-value=5.8e-27 Score=238.54 Aligned_cols=322 Identities=11% Similarity=0.114 Sum_probs=205.3
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCCCCcceeeec-cc-------------------CCceeccchhhhhhhhh--hh
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHVLGGAAVTEE-II-------------------PGFQFSRASYLLSLLRP--HI 58 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~s~~-~~-------------------~G~~~d~g~~~~~~~~~--~~ 58 (523)
|||++||+||++|+++|++|+|+|+++++||+++|++ .. .+|.+|.|+.++....+ .+
T Consensus 13 G~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~s~~~~~~g~~~~~~~~~~~~~~~~g~~~~~d~gP~~l~~~~~l~~l 92 (433)
T 1d5t_A 13 GTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLEGPPETMGRGRDWNVDLIPKFLMANGQLVKM 92 (433)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTSCEECSHHHHHHHTTCTTCCCGGGCCGGGCCEESSCCBEETTSHHHHH
T ss_pred CcCHHHHHHHHHHHHCCCcEEEEecCCCccccccccccHHHHHhhccCCCCChhHhcccCceEEccCcceeeccchHHHH
Confidence 8999999999999999999999999999999999986 21 34666777665432222 57
Q ss_pred hccccccccCceEeecCCCCcccCCCCcccCCCCceeecCCH-HHHHHHHHccChhhHHHHHHHHHHHHHHHhHHHhhhh
Q psy893 59 YKDLELKKHGLKLLTRDPRSYTPLSPDKWTNKAKSLTLGLDP-QKNYEQIARFSVKDAQNFEKYDHHIEEITNLLDPLFD 137 (523)
Q Consensus 59 ~~~lgl~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (523)
++++|+.++ +++...++. +. + .+ |+.+.++.+. +.+...+..++ +...+.+|+..+.++..
T Consensus 93 l~~lgl~~~-l~~~~~~~~-~~-~-~~-----g~~~~~p~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~------- 154 (433)
T 1d5t_A 93 LLYTEVTRY-LDFKVVEGS-FV-Y-KG-----GKIYKVPSTETEALASNLMGMF--EKRRFRKFLVFVANFDE------- 154 (433)
T ss_dssp HHHHTGGGG-CCEEECCEE-EE-E-ET-----TEEEECCCSHHHHHHCSSSCHH--HHHHHHHHHHHHHHCCT-------
T ss_pred HHHcCCccc-eEEEEeCce-EE-e-eC-----CEEEECCCCHHHHhhCcccChh--hHHHHHHHHHHHHhhcc-------
Confidence 888888766 677665532 22 2 22 7777777774 43333222221 34445555544433110
Q ss_pred cCCCChhhHHHHHHHhccccHHHHHHHHhhcHHHHHHhhcCChHHHHHHhhhhhccCCCCCCCcchH---HHHHHHHhhc
Q psy893 138 IAPHDFGNLLMYNLFTRRGEMKDVYSLLTCSAFSILNDWFESEPLKATLLTDGLIGAMVSPHSPSTS---YVLLHHVMGG 214 (523)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 214 (523)
..+ .. .. . .+....|+.+++++++.++.++.++...........+...++. +.+..+....
T Consensus 155 ~~p---~~------~~-~------~~~~~~s~~~~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~s~ 218 (433)
T 1d5t_A 155 NDP---KT------FE-G------VDPQNTSMRDVYRKFDLGQDVIDFTGHALALYRTDDYLDQPCLETINRIKLYSESL 218 (433)
T ss_dssp TCG---GG------GT-T------CCTTTSBHHHHHHHTTCCHHHHHHHHHHTSCCSSSGGGGSBSHHHHHHHHHHHHSC
T ss_pred cCc---hh------cc-c------cccccCCHHHHHHHcCCCHHHHHHHHHHHHhccCCCccCCCHHHHHHHHHHHHHHH
Confidence 000 00 00 0 0113468899999999999999988654221111223222332 2232332221
Q ss_pred ccCCCCceeecCCCHHHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEEeCCeEEEcCEEEEcCChHHHHHhhCC
Q psy893 215 AEGVKGAWAYPEGGMGAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVVTNGLEIKAKYVLSNTTAKCTLLDLIP 294 (523)
Q Consensus 215 ~~~~~g~~~~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~~~g~~~~ad~vI~a~~~~~~~~~ll~ 294 (523)
.....+.+.+|+||++.++++|++.+++.|++|+++++|++|..++ +++++|+.+|+++.||+||+|++++. ..+ .
T Consensus 219 ~~~g~~~~~~p~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~-~~v~~v~~~g~~~~ad~VV~a~~~~~--~~~-~ 294 (433)
T 1d5t_A 219 ARYGKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKPVDDIIMEN-GKVVGVKSEGEVARCKQLICDPSYVP--DRV-R 294 (433)
T ss_dssp CSSSCCSEEEETTCTTHHHHHHHHHHHHHTCCCBCSCCCCEEEEET-TEEEEEEETTEEEECSEEEECGGGCG--GGE-E
T ss_pred HhcCCCcEEEeCcCHHHHHHHHHHHHHHcCCEEECCCEEEEEEEeC-CEEEEEEECCeEEECCEEEECCCCCc--ccc-c
Confidence 1111233448999999999999999999999999999999999987 88777777888999999999999885 222 1
Q ss_pred CCCCCHHHHHHHhcCCCCCCeEEEEEecCCCCcccCCCCCCCCCCCCCCcceEEeCCCCHHHHHHHHHHhhcCCCCCCCe
Q psy893 295 KGNLDERTTQAVQSIDYASPVTKINVALKSIPNFLADPNPSENTVQPHHHGSIHLNCEDMQQVFDAYQDATQGIPSTRPM 374 (523)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~ 374 (523)
++....+.++ + ++++..++. ...+| ++++ .. +.++++|+
T Consensus 295 -------------~~~~~~~~~~--i-l~~~~~~~~--------~~~~~--~i~~-~~--------------~~~~~~~~ 333 (433)
T 1d5t_A 295 -------------KAGQVIRIIC--I-LSHPIKNTN--------DANSC--QIII-PQ--------------NQVNRKSD 333 (433)
T ss_dssp -------------EEEEEEEEEE--E-ESSCCTTST--------TCSSE--EEEE-CG--------------GGTTCSSC
T ss_pred -------------ccCcceeEEE--E-EcCcccccC--------CCceE--EEEe-Cc--------------cccCCCCC
Confidence 1111223332 2 565432221 01244 6776 22 23456799
Q ss_pred EEEEcCCCCCCCCCCCCceEEEEEecccc
Q psy893 375 IEMVLPSSLDNTLSPPGHHVCLLFTQFTP 403 (523)
Q Consensus 375 ~~v~~~s~~d~~~ap~G~~~i~~~~~~~p 403 (523)
++++.+| .||++||+|+++++++++ +|
T Consensus 334 ~~v~~~s-~d~~~aP~G~~~~~~~~~-~p 360 (433)
T 1d5t_A 334 IYVCMIS-YAHNVAAQGKYIAIASTT-VE 360 (433)
T ss_dssp EEEEEEE-GGGTSSCTTCEEEEEEEE-CC
T ss_pred EEEEEEC-CCCcccCCCCEEEEEEEe-cC
Confidence 9999999 999999999998887764 44
No 12
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=99.94 E-value=2.3e-27 Score=245.58 Aligned_cols=422 Identities=16% Similarity=0.098 Sum_probs=230.6
Q ss_pred CCChhHHHHHHHHHHcCC--cEEEEccCCCCCcceeeecccCCceeccchhhhhhh---h---hhhhccccccccCceEe
Q psy893 1 EAGHNGLVSAAYLARAGL--SVAVLERRHVLGGAAVTEEIIPGFQFSRASYLLSLL---R---PHIYKDLELKKHGLKLL 72 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~--~V~vlE~~~~~GG~~~s~~~~~G~~~d~g~~~~~~~---~---~~~~~~lgl~~~g~~~~ 72 (523)
|||++||+||++|+++|+ +|+|||+++++||++++....+|+.+|.|++++... . ..+++++|++.. +...
T Consensus 9 GaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~GG~~~t~~~~~g~~~d~G~~~~~~~~~~~~~~~~l~~~lgl~~~-~~~~ 87 (477)
T 3nks_A 9 GGGISGLAASYHLSRAPCPPKVVLVESSERLGGWIRSVRGPNGAIFELGPRGIRPAGALGARTLLLVSELGLDSE-VLPV 87 (477)
T ss_dssp CCBHHHHHHHHHHHTSSSCCEEEEECSSSSSBTTCCEEECTTSCEEESSCCCBCCCHHHHHHHHHHHHHTTCGGG-EEEE
T ss_pred CCcHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCceEEEeccCCeEEEeCCCcccCCCcccHHHHHHHHHcCCcce-eeec
Confidence 899999999999999999 999999999999999987634699999998875322 1 267888887644 2211
Q ss_pred ec-CCCCc-ccCCCCcccCCCCceeecCCHHHHHHHHHccChhhHHHHHHHHHHHHHHHhHHHhhhhcCCCChhhHHHHH
Q psy893 73 TR-DPRSY-TPLSPDKWTNKAKSLTLGLDPQKNYEQIARFSVKDAQNFEKYDHHIEEITNLLDPLFDIAPHDFGNLLMYN 150 (523)
Q Consensus 73 ~~-~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (523)
.. .+... ...+. +++.+.++.+.......+..+.... +.. .+..+..... .
T Consensus 88 ~~~~~~~~~~~~~~-----~g~~~~~p~~~~~~~~~~~~~~~~~------~~~-------~~~~~~~~~~-~-------- 140 (477)
T 3nks_A 88 RGDHPAAQNRFLYV-----GGALHALPTGLRGLLRPSPPFSKPL------FWA-------GLRELTKPRG-K-------- 140 (477)
T ss_dssp CTTSHHHHCEEEEE-----TTEEEECCCSSCC---CCTTSCSCS------SHH-------HHTTTTSCCC-C--------
T ss_pred CCCCchhcceEEEE-----CCEEEECCCChhhcccccchhhhHH------HHH-------HHHhhhcCCC-C--------
Confidence 11 00000 00001 1444444333211111000110000 000 0011111000 0
Q ss_pred HHhccccHHHHHHHHhhcHHHHHHhhcCChHHHHHHhhhh--hccCCCCCCCcchHHHH--HHH-----------Hhhc-
Q psy893 151 LFTRRGEMKDVYSLLTCSAFSILNDWFESEPLKATLLTDG--LIGAMVSPHSPSTSYVL--LHH-----------VMGG- 214 (523)
Q Consensus 151 ~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~--~~~-----------~~~~- 214 (523)
....++.+|+.+.+..+....++.... .++ ..+.+.+....+ +.. ++..
T Consensus 141 -------------~~~~s~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~ls~~~~~~~l~~~e~~~gsl~~~~~~~~ 205 (477)
T 3nks_A 141 -------------EPDETVHSFAQRRLGPEVASLAMDSLCRGVFA--GNSRELSIRSCFPSLFQAEQTHRSILLGLLLGA 205 (477)
T ss_dssp -------------SSCCBHHHHHHHHHCHHHHHHTHHHHHHHHHS--SCTTTBBHHHHCHHHHHHHHHHSCHHHHHHHC-
T ss_pred -------------CCCcCHHHHHHHhhCHHHHHHHHHHHhccccc--CCHHHhhHHHHHHHHHHHHHHcCCHHHHHHHhc
Confidence 011344555555544443333332221 111 233333322211 000 0000
Q ss_pred --------------ccCCCCceeecCCCHHHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEEeCCeEEEcCEEE
Q psy893 215 --------------AEGVKGAWAYPEGGMGAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVVTNGLEIKAKYVL 280 (523)
Q Consensus 215 --------------~~~~~g~~~~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~~~g~~~~ad~vI 280 (523)
.....+.+ +++||++.++++|++.+++.|++|++|++|++|..++ ++++.|+.+++++.||+||
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~-~~~gG~~~l~~~l~~~l~~~g~~i~~~~~V~~i~~~~-~~~~~v~~~~~~~~ad~vv 283 (477)
T 3nks_A 206 GRTPQPDSALIRQALAERWSQW-SLRGGLEMLPQALETHLTSRGVSVLRGQPVCGLSLQA-EGRWKVSLRDSSLEADHVI 283 (477)
T ss_dssp ----CCCCHHHHHHHHTTCSEE-EETTCTTHHHHHHHHHHHHTTCEEECSCCCCEEEECG-GGCEEEECSSCEEEESEEE
T ss_pred ccccCCchhhhhhhcccCccEE-EECCCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEcC-CceEEEEECCeEEEcCEEE
Confidence 00012344 8999999999999999999999999999999999876 5545566555589999999
Q ss_pred EcCChHHHHHhhCCCCCCCHHHHHHHhcCCCCCCeEEEEEecCCCCcccCCCCCCCCCCCCCCcceEEeCCCCHHHHHHH
Q psy893 281 SNTTAKCTLLDLIPKGNLDERTTQAVQSIDYASPVTKINVALKSIPNFLADPNPSENTVQPHHHGSIHLNCEDMQQVFDA 360 (523)
Q Consensus 281 ~a~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 360 (523)
+|++++.+ .+|+++ .++...+.+.++.+. ++.+|++.++++. | + ... .-++....
T Consensus 284 ~a~p~~~~-~~ll~~--~~~~~~~~l~~~~~~-~~~~v~l~~~~~~-~---~-------~~~---~g~l~~~~------- 338 (477)
T 3nks_A 284 SAIPASVL-SELLPA--EAAPLARALSAITAV-SVAVVNLQYQGAH-L---P-------VQG---FGHLVPSS------- 338 (477)
T ss_dssp ECSCHHHH-HHHSCG--GGHHHHHHHHTCCEE-EEEEEEEEETTCC-C---S-------SCS---SEEECCTT-------
T ss_pred ECCCHHHH-HHhccc--cCHHHHHHHhcCCCC-cEEEEEEEECCCC-C---C-------CCC---ceEEccCC-------
Confidence 99999985 678764 345677888888775 6788999998642 2 1 111 12221111
Q ss_pred HHHhhcCCCCCCCeEEEEcCCCCCCCCC-CCCceEEEEEecccccCC-CCCCCCCHHHHHHHHHHHHHHHHHhCCCCCCC
Q psy893 361 YQDATQGIPSTRPMIEMVLPSSLDNTLS-PPGHHVCLLFTQFTPYKL-AGDRDWTEEDKANYATNVFSSIEQYCPGFTQD 438 (523)
Q Consensus 361 ~~~~~~g~~~~~~~~~v~~~s~~d~~~a-p~G~~~i~~~~~~~p~~~-~~~~~~~~~~k~~~~~~~~~~l~~~~P~~~~~ 438 (523)
...+.+.+.+.|...|.+. |+|+.++++++. ..+.. ..+..| +..++++.+.+++.|+++++ +...
T Consensus 339 ---------~~~~~~~~~~~s~~~~~~~~~~~~~~l~~~~g-g~~~~~~~~~~~-~~~~~~~~~~~~~~L~~~~g-~~~~ 406 (477)
T 3nks_A 339 ---------EDPGVLGIVYDSVAFPEQDGSPPGLRVTVMLG-GSWLQTLEASGC-VLSQELFQQRAQEAAATQLG-LKEM 406 (477)
T ss_dssp ---------TCSSEEEEECHHHHCGGGSTTTTCEEEEEEEC-HHHHHHHHHSSC-CCCHHHHHHHHHHHHHHHHC-CCSC
T ss_pred ---------CCCCceEEEEeccccCCCCCCCCceEEEEEEC-CccccccccccC-CCCHHHHHHHHHHHHHHHhC-CCCC
Confidence 0124445555444444333 447777776653 11100 000011 12458899999999999874 2222
Q ss_pred eEEeEecChhhHHHhcCCCCCccccCcccccccccCCCCCCCCCCCCCCCCCCeEecCCCCCCCCCCCCc--cHHHHHHH
Q psy893 439 IVGYEILTPPDLEKEFGLTGGNIFHGALSLNQLLFNRPLPIQGPSSPFTLIPHLLLCGSGAHPGGGVCGA--PGYIAAQM 516 (523)
Q Consensus 439 i~~~~~~tP~~~~~~~~~~~G~~~g~~~~~~q~~~~rp~~~~~~~~~~t~i~~LylaG~~~~pg~g~~~a--sG~~aA~~ 516 (523)
.....+. .|.+ ..++..+.+. ....+. +. ......+|||+||+|. .|.|+++| ||+.||++
T Consensus 407 ~~~~~v~---rw~~--a~p~~~~g~~-~~~~~~---~~-------~l~~~~~~l~l~G~~~-~G~gv~~a~~sg~~aA~~ 469 (477)
T 3nks_A 407 PSHCLVH---LHKN--CIPQYTLGHW-QKLESA---RQ-------FLTAHRLPLTLAGASY-EGVAVNDCIESGRQAAVS 469 (477)
T ss_dssp CSEEEEE---EEEE--EEECCBTTHH-HHHHHH---HH-------HHHHTTCSEEECSTTT-SCCSHHHHHHHHHHHHHH
T ss_pred CcEEEEE---EcCC--ccCCCCCCHH-HHHHHH---HH-------HHHhcCCCEEEEccCC-CCCcHHHHHHHHHHHHHH
Confidence 2222211 1111 0111111100 000000 00 0011236899999996 78899987 99999999
Q ss_pred HHHHh
Q psy893 517 VNRLM 521 (523)
Q Consensus 517 i~~~~ 521 (523)
|+++-
T Consensus 470 il~~~ 474 (477)
T 3nks_A 470 VLGTE 474 (477)
T ss_dssp HHHCC
T ss_pred HHhcc
Confidence 99753
No 13
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=99.93 E-value=1.4e-25 Score=232.92 Aligned_cols=244 Identities=13% Similarity=0.104 Sum_probs=159.3
Q ss_pred eeecCCCHHHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-eCC---eEEEcCEEEEcCChHHHHHhhCCCCC
Q psy893 222 WAYPEGGMGAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-TNG---LEIKAKYVLSNTTAKCTLLDLIPKGN 297 (523)
Q Consensus 222 ~~~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~~g---~~~~ad~vI~a~~~~~~~~~ll~~~~ 297 (523)
+.+++||++.|+++|++.+.+ ++|++|++|++|..++ ++++ |+ .+| ++++||+||+|+|+..+ .+|.. .
T Consensus 231 ~~~~~gG~~~l~~~l~~~l~~--~~i~~~~~V~~i~~~~-~~v~-v~~~~g~~~~~~~ad~vI~a~p~~~l-~~l~~--~ 303 (489)
T 2jae_A 231 MFTPVGGMDRIYYAFQDRIGT--DNIVFGAEVTSMKNVS-EGVT-VEYTAGGSKKSITADYAICTIPPHLV-GRLQN--N 303 (489)
T ss_dssp EEEETTCTTHHHHHHHHHHCG--GGEETTCEEEEEEEET-TEEE-EEEEETTEEEEEEESEEEECSCHHHH-TTSEE--C
T ss_pred EEeecCCHHHHHHHHHHhcCC--CeEEECCEEEEEEEcC-CeEE-EEEecCCeEEEEECCEEEECCCHHHH-HhCcc--C
Confidence 348999999999999997743 7899999999999887 6654 65 555 67999999999999974 56654 4
Q ss_pred CCHHHHHHHhcCCCCCCeEEEEEecCCCCcccCCCCCCCCCCCCCCcceEEeCCCCHHHHHHHHHHhhcCCCCCCCeEEE
Q psy893 298 LDERTTQAVQSIDYASPVTKINVALKSIPNFLADPNPSENTVQPHHHGSIHLNCEDMQQVFDAYQDATQGIPSTRPMIEM 377 (523)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v 377 (523)
+++...+.++++.+. ++++|++.++++ .|.. . ....+.+.. . +.|...+
T Consensus 304 l~~~~~~~l~~~~~~-~~~kv~l~~~~~-~w~~-------~--~~~~g~~~~-~-------------------~~~~~~~ 352 (489)
T 2jae_A 304 LPGDVLTALKAAKPS-SSGKLGIEYSRR-WWET-------E--DRIYGGASN-T-------------------DKDISQI 352 (489)
T ss_dssp CCHHHHHHHHTEECC-CEEEEEEEESSC-HHHH-------T--TCCCSCEEE-E-------------------SSTTCEE
T ss_pred CCHHHHHHHHhCCCc-cceEEEEEeCCC-CccC-------C--CCccccccc-C-------------------CCCceEE
Confidence 788888899999876 789999999864 2310 0 001111211 1 1245567
Q ss_pred EcCCCCCCCCCCCCceEEEEEecccccCCCCCCCCCHHHHHHHHHHHHHHHHHhCCC-CCCCeEEeEecChhhHHHhcCC
Q psy893 378 VLPSSLDNTLSPPGHHVCLLFTQFTPYKLAGDRDWTEEDKANYATNVFSSIEQYCPG-FTQDIVGYEILTPPDLEKEFGL 456 (523)
Q Consensus 378 ~~~s~~d~~~ap~G~~~i~~~~~~~p~~~~~~~~~~~~~k~~~~~~~~~~l~~~~P~-~~~~i~~~~~~tP~~~~~~~~~ 456 (523)
.++|..++ .|+ ..++..++. .+.. ..|....++++.+.+++.|++++|. +++.++... +.+|.+.. .
T Consensus 353 ~~~s~~~~--~~~-~~l~~~~~~-g~~~----~~~~~~~~~~~~~~~l~~L~~~~~~~~~~~~~~~~---~~~W~~~~-~ 420 (489)
T 2jae_A 353 MFPYDHYN--SDR-GVVVAYYSS-GKRQ----EAFESLTHRQRLAKAIAEGSEIHGEKYTRDISSSF---SGSWRRTK-Y 420 (489)
T ss_dssp ECCSSSTT--SSC-EEEEEEEEE-THHH----HHHHTSCHHHHHHHHHHHHHHHHCGGGGSSEEEEE---EEEGGGST-T
T ss_pred EeCCCCCC--CCC-CEEEEEeeC-Cchh----hhhhcCCHHHHHHHHHHHHHHHcCcchhhhccccE---EEEcCCCC-C
Confidence 76765442 233 233323332 1110 1233334688999999999999997 777766543 33576542 2
Q ss_pred CCCccccCc----ccccccccCCCCCCCCCCCCCCCCCCeEecCCCC-CCCCCCCCc--cHHHHHHHHHHHhc
Q psy893 457 TGGNIFHGA----LSLNQLLFNRPLPIQGPSSPFTLIPHLLLCGSGA-HPGGGVCGA--PGYIAAQMVNRLMR 522 (523)
Q Consensus 457 ~~G~~~g~~----~~~~q~~~~rp~~~~~~~~~~t~i~~LylaG~~~-~pg~g~~~a--sG~~aA~~i~~~~~ 522 (523)
..|+..... ..+.+....++ ..++|++||||||+++ ++++++++| ||.+||++|++.+.
T Consensus 421 ~~G~~~~~~~~~~~~~~~~~~~~~-------~l~~~~~~l~faG~~~~~~~~~v~gAi~sg~~aA~~i~~~l~ 486 (489)
T 2jae_A 421 SESAWANWAGSGGSHGGAATPEYE-------KLLEPVDKIYFAGDHLSNAIAWQHGALTSARDVVTHIHERVA 486 (489)
T ss_dssp TSCSSCEETTC-------CCHHHH-------HHTSCBTTEEECSGGGBSSTTSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcchhcccccCCCcccchhhHH-------HHhCCCCcEEEeEHHhccCccHHHHHHHHHHHHHHHHHHHHh
Confidence 344432111 00111111111 3356789999999988 577889987 99999999998764
No 14
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=99.93 E-value=2.2e-25 Score=230.54 Aligned_cols=417 Identities=15% Similarity=0.159 Sum_probs=229.7
Q ss_pred CCChhHHHHHHHHHHcC--CcEEEEccCCCCCcceeeecccCCceeccchhhhhhhhh---hhhccccccccCceEeecC
Q psy893 1 EAGHNGLVSAAYLARAG--LSVAVLERRHVLGGAAVTEEIIPGFQFSRASYLLSLLRP---HIYKDLELKKHGLKLLTRD 75 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G--~~V~vlE~~~~~GG~~~s~~~~~G~~~d~g~~~~~~~~~---~~~~~lgl~~~g~~~~~~~ 75 (523)
|||++||+||++|+++| ++|+|||+++++||++++.. .+|+.+|.|++++....+ .+++++|++.. +. ...
T Consensus 11 GaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG~~~~~~-~~g~~~~~g~~~~~~~~~~~~~l~~~lg~~~~-~~--~~~ 86 (475)
T 3lov_A 11 GGGITGLAAAYYAERAFPDLNITLLEAGERLGGKVATYR-EDGFTIERGPDSYVARKHILTDLIEAIGLGEK-LV--RNN 86 (475)
T ss_dssp CCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBTTCCEEC-STTCCEESSCCCEETTSTHHHHHHHHTTCGGG-EE--ECC
T ss_pred CCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCceeEEEe-eCCEEEecCchhhhcccHHHHHHHHHcCCcce-Ee--ecC
Confidence 89999999999999999 99999999999999999887 689999999877544333 57778887643 21 110
Q ss_pred CCCcccCCCCcccCCCCceeecCCH----HHHHHHHHccChhhHHHHHHHHHHHHHHHhHHHhhhhcCCCChhhHHHHHH
Q psy893 76 PRSYTPLSPDKWTNKAKSLTLGLDP----QKNYEQIARFSVKDAQNFEKYDHHIEEITNLLDPLFDIAPHDFGNLLMYNL 151 (523)
Q Consensus 76 ~~~~~~~~~~~~~~~g~~~~~~~~~----~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (523)
.. ...++. +++...++.+. ......+.....-.. ...+ .+.+ ++.......
T Consensus 87 ~~-~~~~~~-----~g~~~~~p~~~~~~~p~~~~~~~~~~~~~~------~~~~-~~~~----~~~~~~~~~-------- 141 (475)
T 3lov_A 87 TS-QAFILD-----TGGLHPIPKGAVMGIPTDLDLFRQTTLLTE------EEKQ-EVAD----LLLHPSDSL-------- 141 (475)
T ss_dssp CC-CEEEEE-----TTEEEECCSSEETTEESCHHHHTTCSSSCH------HHHH-HHHH----HHHSCCTTC--------
T ss_pred CC-ceEEEE-----CCEEEECCCcccccCcCchHHHhhccCCCh------hHHH-HhhC----cccCCcccc--------
Confidence 10 111111 03333322211 000011111000000 0000 1111 111000000
Q ss_pred HhccccHHHHHHHHhhcHHHHHHhhcCChHHHHHHhhhhh-ccCCCCCCCcchH--H-HH----------HHHHhhcc--
Q psy893 152 FTRRGEMKDVYSLLTCSAFSILNDWFESEPLKATLLTDGL-IGAMVSPHSPSTS--Y-VL----------LHHVMGGA-- 215 (523)
Q Consensus 152 ~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~--~-~~----------~~~~~~~~-- 215 (523)
... ....++.+|+.+.+..+..+.++..... ... ..+.+.+.. + .+ ...+....
T Consensus 142 ---~~~------~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~ls~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 211 (475)
T 3lov_A 142 ---RIP------EQDIPLGEYLRPRLGDALVEKLIEPLLSGIYA-GNIDQMSTFATYPQFVANEQKAGSLFEGMRLMRPL 211 (475)
T ss_dssp ---CCC------SSCCBHHHHHHHHHCHHHHHHTHHHHHHGGGC-CCTTTSBSTTTCHHHHHHHHHHSSHHHHHHHTCC-
T ss_pred ---cCC------CCCcCHHHHHHHHhCHHHHHHHHHHHhceeec-CChHHcCHHHHHHHHHHHHHhcCcHHHHHHHhccc
Confidence 000 0123566666666555544444433221 111 223232211 0 01 00000000
Q ss_pred ----------cCCCCceeecCCCHHHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-eCCeEEEcCEEEEcCC
Q psy893 216 ----------EGVKGAWAYPEGGMGAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-TNGLEIKAKYVLSNTT 284 (523)
Q Consensus 216 ----------~~~~g~~~~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~~g~~~~ad~vI~a~~ 284 (523)
....+.+.+++||++.+++.|++.+.+ ++|++|++|++|..++ +++ .|+ .+| +++||+||+|+|
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~l~~--~~i~~~~~V~~i~~~~-~~~-~v~~~~g-~~~ad~vV~a~p 286 (475)
T 3lov_A 212 DQLPQTPQTTIKATGQFLSLETGLESLIERLEEVLER--SEIRLETPLLAISRED-GRY-RLKTDHG-PEYADYVLLTIP 286 (475)
T ss_dssp -------------CCSEEEETTCHHHHHHHHHHHCSS--CEEESSCCCCEEEEET-TEE-EEECTTC-CEEESEEEECSC
T ss_pred ccccccccccccCCCcEEeeCChHHHHHHHHHhhccC--CEEEcCCeeeEEEEeC-CEE-EEEECCC-eEECCEEEECCC
Confidence 001233458999999999999997754 7999999999999887 554 466 677 899999999999
Q ss_pred hHHHHHhhCCCCCCCHHHHHHHhcCCCCCCeEEEEEecCCCCcccCCCCCCCCCCCCCCcceEEeCCCCHHHHHHHHHHh
Q psy893 285 AKCTLLDLIPKGNLDERTTQAVQSIDYASPVTKINVALKSIPNFLADPNPSENTVQPHHHGSIHLNCEDMQQVFDAYQDA 364 (523)
Q Consensus 285 ~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 364 (523)
++.+ .+|+++..+ +.++++.+. ++.++++.++++. .. +.. .. .++. ..+
T Consensus 287 ~~~~-~~ll~~~~~-----~~~~~~~~~-~~~~v~l~~~~~~-~~---------~~~-g~-g~l~-~~~----------- 335 (475)
T 3lov_A 287 HPQV-VQLLPDAHL-----PELEQLTTH-STATVTMIFDQQQ-SL---------PIE-GT-GFVV-NRR----------- 335 (475)
T ss_dssp HHHH-HHHCTTSCC-----HHHHTCCEE-EEEEEEEEEECCS-SC---------SSS-SS-EEEE-CTT-----------
T ss_pred HHHH-HHHcCccCH-----HHHhcCCCC-eEEEEEEEECCcC-CC---------CCC-CE-EEEe-cCC-----------
Confidence 9985 578765432 566777765 7889999998754 21 111 11 2222 221
Q ss_pred hcCCCCCCCeEEEEcCCCCCCCCCCCCceEEEEEecccccCCCCCCCCCHHHHHHHHHHHHHHHHHhCCCCCCCeEEeEe
Q psy893 365 TQGIPSTRPMIEMVLPSSLDNTLSPPGHHVCLLFTQFTPYKLAGDRDWTEEDKANYATNVFSSIEQYCPGFTQDIVGYEI 444 (523)
Q Consensus 365 ~~g~~~~~~~~~v~~~s~~d~~~ap~G~~~i~~~~~~~p~~~~~~~~~~~~~k~~~~~~~~~~l~~~~P~~~~~i~~~~~ 444 (523)
...+...+++.+...+...|+ +.++.+++. .+. ...+.+..++++.+.+++.|+++++.- ...+...+
T Consensus 336 -----~~~~~~~~~~~s~~~~~~~p~-~~~l~~~~~-~~~----~~~~~~~~~e~~~~~~~~~L~~~~g~~-~~p~~~~v 403 (475)
T 3lov_A 336 -----APYSITACTAIDQKWNHSAPD-HTVLRAFVG-RPG----NDHLVHESDEVLQQAVLQDLEKICGRT-LEPKQVII 403 (475)
T ss_dssp -----SSCSEEEEEEHHHHCTTTCTT-EEEEEEEEC-BTT----BCGGGGSCHHHHHHHHHHHHHHHHSSC-CCCSEEEE
T ss_pred -----CCCceEEEEEEcccCCCCCCC-cEEEEEEeC-CCC----CCcccCCCHHHHHHHHHHHHHHHhCCC-CCCeEEEE
Confidence 012344455555556666777 665655542 111 112333456889999999999998642 22222211
Q ss_pred cChhhHHHhc-CCCCCccccCcccccccccCCCCCCCCCCCCCCCCCCeEecCCCCCCCCCCCCc--cHHHHHHHHHHHh
Q psy893 445 LTPPDLEKEF-GLTGGNIFHGALSLNQLLFNRPLPIQGPSSPFTLIPHLLLCGSGAHPGGGVCGA--PGYIAAQMVNRLM 521 (523)
Q Consensus 445 ~tP~~~~~~~-~~~~G~~~g~~~~~~q~~~~rp~~~~~~~~~~t~i~~LylaG~~~~pg~g~~~a--sG~~aA~~i~~~~ 521 (523)
. .|..-. ...-|.. ..+. ..++ ...++++|||+||+++. |.|+++| ||+.||++|++.+
T Consensus 404 ~---~w~~a~p~~~~g~~----~~~~---~~~~-------~l~~~~~~l~~aG~~~~-g~g~~~a~~sG~~aA~~i~~~l 465 (475)
T 3lov_A 404 S---RLMDGLPAYTVGHA----DRIQ---RVRE-------EVLAQYPGIYLAGLAYD-GVGLPDCVASAKTMIESIELEQ 465 (475)
T ss_dssp E---EEEEEEECCCTTHH----HHHH---HHHH-------HHHHHSTTEEECSTTTS-CSSHHHHHHHHHHHHHHHHHTC
T ss_pred E---EcccCCCCCCCChH----HHHH---HHHH-------HHHhhCCCEEEEccCCC-CCCHHHHHHHHHHHHHHHHHHh
Confidence 1 122100 0111110 0011 0111 22346789999999985 5678887 9999999999977
Q ss_pred c
Q psy893 522 R 522 (523)
Q Consensus 522 ~ 522 (523)
+
T Consensus 466 ~ 466 (475)
T 3lov_A 466 S 466 (475)
T ss_dssp -
T ss_pred h
Confidence 5
No 15
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=99.93 E-value=2.1e-25 Score=230.38 Aligned_cols=243 Identities=15% Similarity=0.150 Sum_probs=155.2
Q ss_pred cCCCHHHHHHHHHHHHHHC--------CcEEEeCceeeEEEECCCCCeEEEE-eCCeEEEcCEEEEcCChHHHHHhhCC-
Q psy893 225 PEGGMGAVSQALARSAQAS--------GAQLFTSQTVTEITLDSDKRASGVV-TNGLEIKAKYVLSNTTAKCTLLDLIP- 294 (523)
Q Consensus 225 ~~gG~~~l~~~l~~~~~~~--------G~~i~~~~~V~~I~~~~~~~~~~v~-~~g~~~~ad~vI~a~~~~~~~~~ll~- 294 (523)
++||++.++++|++.+.+. |++|+++++|++|..++ ++++ |+ .+|++++||+||+|+++..+. +++.
T Consensus 201 ~~gG~~~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~~-~~v~-v~~~~g~~~~ad~vI~a~~~~~l~-~~~~~ 277 (472)
T 1b37_A 201 DQRGYEAVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKYSP-GGVT-VKTEDNSVYSADYVMVSASLGVLQ-SDLIQ 277 (472)
T ss_dssp CTTCTTHHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEECS-SCEE-EEETTSCEEEESEEEECSCHHHHH-TTSSE
T ss_pred cCCcHHHHHHHHHHhccccccccccccccEEEcCCEEEEEEEcC-CcEE-EEECCCCEEEcCEEEEecCHHHhc-cCCee
Confidence 4799999999999988765 78999999999999987 6665 77 788889999999999999864 4432
Q ss_pred -CCCCCHHHHHHHhcCCCCCCeEEEEEecCCCCcccCCCCCCCCCCCCCCcceEEeCCCCHHHHHHHHHHhhcCCCCCCC
Q psy893 295 -KGNLDERTTQAVQSIDYASPVTKINVALKSIPNFLADPNPSENTVQPHHHGSIHLNCEDMQQVFDAYQDATQGIPSTRP 373 (523)
Q Consensus 295 -~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~ 373 (523)
.+.+++...+.++++.+. ++.+|++.++++ .|. .. ..+. .+.. .+.. .+. .
T Consensus 278 ~~p~Lp~~~~~ai~~~~~~-~~~kv~l~~~~~-~w~--------~~-~~~~-~~~~-~~~~-----------~~~----~ 329 (472)
T 1b37_A 278 FKPKLPTWKVRAIYQFDMA-VYTKIFLKFPRK-FWP--------EG-KGRE-FFLY-ASSR-----------RGY----Y 329 (472)
T ss_dssp EESCCCHHHHHHHHHSEEE-CEEEEEEECSSC-CSC--------CS-TTCS-EEEE-CCSS-----------TTS----S
T ss_pred ECCCCCHHHHHHHHhcCCc-ceeEEEEECCCc-CCC--------CC-CCcc-eEEe-cccC-----------Ccc----c
Confidence 356888888899988765 678999999874 341 00 1111 1222 1110 011 1
Q ss_pred eEEEEcCCCCCCCCCCCCceEEEEEecccccCCCCCCCCCHHHHHHHHHHHHHHHHHhCCCCC-CCeEEeEecChhhHHH
Q psy893 374 MIEMVLPSSLDNTLSPPGHHVCLLFTQFTPYKLAGDRDWTEEDKANYATNVFSSIEQYCPGFT-QDIVGYEILTPPDLEK 452 (523)
Q Consensus 374 ~~~v~~~s~~d~~~ap~G~~~i~~~~~~~p~~~~~~~~~~~~~k~~~~~~~~~~l~~~~P~~~-~~i~~~~~~tP~~~~~ 452 (523)
.++.. .|+. .| |.+++.+++. .+. .+.|....++++.+.+++.|++++|+.. ...+...+.+ |..
T Consensus 330 ~~~~~----~~~~-~p-~~~~l~~~~~-~~~----a~~~~~~~~~e~~~~~l~~L~~~~Pg~~~~~~~~~~~~~---W~~ 395 (472)
T 1b37_A 330 GVWQE----FEKQ-YP-DANVLLVTVT-DEE----SRRIEQQSDEQTKAEIMQVLRKMFPGKDVPDATDILVPR---WWS 395 (472)
T ss_dssp CEEEE----CTTT-ST-TCCEEEEEEE-HHH----HHHHHTSCHHHHHHHHHHHHHHHCTTSCCCCCSEEECCC---TTT
T ss_pred eeeec----ccCC-CC-CCCEEEEEec-hHH----HHHHHhCCHHHHHHHHHHHHHHHcCCCCCCCCceEEecc---cCC
Confidence 22322 2332 34 4555555532 111 0113223478999999999999999864 2233333443 332
Q ss_pred hcCCCCCccccCcccccccccCCCCCCCCCCCCCCCCCCeEecCCCCCC--CCCCCCc--cHHHHHHHHHHHhc
Q psy893 453 EFGLTGGNIFHGALSLNQLLFNRPLPIQGPSSPFTLIPHLLLCGSGAHP--GGGVCGA--PGYIAAQMVNRLMR 522 (523)
Q Consensus 453 ~~~~~~G~~~g~~~~~~q~~~~rp~~~~~~~~~~t~i~~LylaG~~~~p--g~g~~~a--sG~~aA~~i~~~~~ 522 (523)
. ....|+..... +.+....++ ..++|++||||||+++++ ++++.|| ||.+||++|++.++
T Consensus 396 ~-~~~~G~~~~~~--~g~~~~~~~-------~l~~p~~~l~fAG~~t~~~~~g~v~GA~~SG~~aA~~i~~~l~ 459 (472)
T 1b37_A 396 D-RFYKGTFSNWP--VGVNRYEYD-------QLRAPVGRVYFTGEHTSEHYNGYVHGAYLSGIDSAEILINCAQ 459 (472)
T ss_dssp C-TTTSSSEEECB--TTCCHHHHH-------HHHCCBTTEEECSGGGCTTTTTSHHHHHHHHHHHHHHHHHHHH
T ss_pred C-CCCCcccCCCC--CCCChhHHH-------HHhccCCcEEEeecccCCCCCCchhHHHHHHHHHHHHHHHHHH
Confidence 1 22345432111 111100112 457789999999999986 4577888 99999999998774
No 16
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=99.92 E-value=1.3e-25 Score=234.62 Aligned_cols=277 Identities=16% Similarity=0.205 Sum_probs=152.3
Q ss_pred CCChhHHHHHHHHHHc-CCcEEEEccCCCCCcceeeecccCCceeccchhhhhhhhh---hhhccccccccCceEeecCC
Q psy893 1 EAGHNGLVSAAYLARA-GLSVAVLERRHVLGGAAVTEEIIPGFQFSRASYLLSLLRP---HIYKDLELKKHGLKLLTRDP 76 (523)
Q Consensus 1 GaG~~GL~aA~~La~~-G~~V~vlE~~~~~GG~~~s~~~~~G~~~d~g~~~~~~~~~---~~~~~lgl~~~g~~~~~~~~ 76 (523)
|||++||+||++|+++ |++|+||||++++||+++|+...+||.||.|+|++....+ .++++++.... ++...++
T Consensus 17 GaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG~~~T~~~~~G~~~D~G~h~~~~~~~~v~~l~~e~~~~~~--~~~~~~~ 94 (513)
T 4gde_A 17 GAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLASTDVTPEGFLYDVGGHVIFSHYKYFDDCLDEALPKED--DWYTHQR 94 (513)
T ss_dssp CCSHHHHHHHHHHHHHCCSCEEEEESSSSCCGGGCEEECTTSCEEESSCCCCCCCBHHHHHHHHHHSCSGG--GEEEEEC
T ss_pred CCcHHHHHHHHHHHhhCCCCEEEEECCCCCcCCeeeEEecCCEEEEeCceEecCCCHHHHHHHHHhCCccc--eeEEecC
Confidence 9999999999999985 9999999999999999998654789999999998755455 34555543322 2332222
Q ss_pred CCcccCCCCcccCCCCceeecCCHHHHHHHHHccChhhHHHHHHHHHHHHHHHhH-HH-hhhhcCCCChhhHHHHHHHhc
Q psy893 77 RSYTPLSPDKWTNKAKSLTLGLDPQKNYEQIARFSVKDAQNFEKYDHHIEEITNL-LD-PLFDIAPHDFGNLLMYNLFTR 154 (523)
Q Consensus 77 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~ 154 (523)
..+ .+.+ |+.+.++-. ..+..+..... ......+... .. ......+.++.++...
T Consensus 95 ~~~-i~~~------g~~~~~p~~-----~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~----- 151 (513)
T 4gde_A 95 ISY-VRCQ------GQWVPYPFQ-----NNISMLPKEEQ------VKCIDGMIDAALEARVANTKPKTFDEWIVR----- 151 (513)
T ss_dssp CEE-EEET------TEEEESSGG-----GGGGGSCHHHH------HHHHHHHHHHHHHHHTCCSCCCSHHHHHHH-----
T ss_pred ceE-EEEC------CeEeecchh-----hhhhhcchhhH------HHHHHHHHHHHHhhhcccccccCHHHHHHH-----
Confidence 111 1112 554443311 11111111111 0111111110 00 1111112222222111
Q ss_pred cccHHHHHHHHhhcHHHHHHhhcCChHHHHHHhhhhh-cc-CCCCC--CCcchHHHHHHHHhhccc----CCCCceeecC
Q psy893 155 RGEMKDVYSLLTCSAFSILNDWFESEPLKATLLTDGL-IG-AMVSP--HSPSTSYVLLHHVMGGAE----GVKGAWAYPE 226 (523)
Q Consensus 155 ~~~~~~~~~~~~~s~~~~l~~~~~~~~l~~~~~~~~~-~~-~~~~~--~~~~~~~~~~~~~~~~~~----~~~g~~~~~~ 226 (523)
.+.+.+.+.+-.+....+...... +. ....+ .................. .....+..++
T Consensus 152 -------------~~g~~l~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (513)
T 4gde_A 152 -------------MMGTGIADLFMRPYNFKVWAVPTTKMQCAWLGERVAAPNLKAVTTNVILGKTAGNWGPNATFRFPAR 218 (513)
T ss_dssp -------------HHHHHHHHHTHHHHHHHHHSSCGGGBCSGGGCSSCCCCCHHHHHHHHHHTCCCCSCBTTBEEEEESS
T ss_pred -------------hhhhhhhhhhcchhhhhhccCChHHhhHHHHHHhhcccchhhhhhhhhhcccccccccccceeeccc
Confidence 111112222222222222211110 00 00000 011111111111111110 1111222458
Q ss_pred CCHHHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-eCCeEEEcCEEEEcCChHHHHHhhCCCCCCCHHHHHH
Q psy893 227 GGMGAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-TNGLEIKAKYVLSNTTAKCTLLDLIPKGNLDERTTQA 305 (523)
Q Consensus 227 gG~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~~g~~~~ad~vI~a~~~~~~~~~ll~~~~~~~~~~~~ 305 (523)
||++.++++|++.+++.|++|++|++|++|..++ ++ |+ .+|+++.||+||+|+|+..+ .+++.+ +.....
T Consensus 219 gG~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~-~~---v~~~~G~~~~ad~vI~t~P~~~l-~~~l~~----~~~~~~ 289 (513)
T 4gde_A 219 GGTGGIWIAVANTLPKEKTRFGEKGKVTKVNANN-KT---VTLQDGTTIGYKKLVSTMAVDFL-AEAMND----QELVGL 289 (513)
T ss_dssp SHHHHHHHHHHHTSCGGGEEESGGGCEEEEETTT-TE---EEETTSCEEEEEEEEECSCHHHH-HHHTTC----HHHHHH
T ss_pred CCHHHHHHHHHHHHHhcCeeeecceEEEEEEccC-CE---EEEcCCCEEECCEEEECCCHHHH-HHhcCc----hhhHhh
Confidence 9999999999999999999999999999999876 43 45 88999999999999999986 467653 445666
Q ss_pred HhcCCCCCCeEEEEEecCCC
Q psy893 306 VQSIDYASPVTKINVALKSI 325 (523)
Q Consensus 306 ~~~~~~~~~~~~v~~~~~~~ 325 (523)
...+.|. ++.+|.++++..
T Consensus 290 ~~~l~y~-~~~~v~l~~~~~ 308 (513)
T 4gde_A 290 TKQLFYS-STHVIGVGVRGS 308 (513)
T ss_dssp HTTCCEE-EEEEEEEEEESS
T ss_pred hhcccCC-ceEEEEEEEecc
Confidence 7777775 778888888754
No 17
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=99.91 E-value=1.2e-23 Score=218.95 Aligned_cols=424 Identities=18% Similarity=0.122 Sum_probs=224.2
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCCCCcceeeecc-cCCceeccchhhhhhhhh---hhhccccccccCceEeecCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHVLGGAAVTEEI-IPGFQFSRASYLLSLLRP---HIYKDLELKKHGLKLLTRDP 76 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~s~~~-~~G~~~d~g~~~~~~~~~---~~~~~lgl~~~g~~~~~~~~ 76 (523)
|||++||+||+.|+++|++|+|||+++++||++.+... .+|+.+|.|++++....+ .+++++|+... .+...+.
T Consensus 40 GaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~ 117 (498)
T 2iid_A 40 GAGMAGLSAAYVLAGAGHQVTVLEASERPGGRVRTYRNEEAGWYANLGPMRLPEKHRIVREYIRKFDLRLN--EFSQEND 117 (498)
T ss_dssp CCBHHHHHHHHHHHHHTCEEEEECSSSSSBTTCCEEEETTTTEEEESSCCCEETTCHHHHHHHHHTTCCEE--EECSCCT
T ss_pred CCCHHHHHHHHHHHhCCCeEEEEECCCCCCCceeeeccCCCCchhhcCcccccchHHHHHHHHHHhCCCce--eecccCC
Confidence 89999999999999999999999999999999987652 468899999877543322 45566665311 1111111
Q ss_pred CCcccCCCCcccCCCCceeec---CCHHHHHHHHHccChhhH-HHHHH-HHHHHHHHHhHHHhhhhcCCCChhhHHHHHH
Q psy893 77 RSYTPLSPDKWTNKAKSLTLG---LDPQKNYEQIARFSVKDA-QNFEK-YDHHIEEITNLLDPLFDIAPHDFGNLLMYNL 151 (523)
Q Consensus 77 ~~~~~~~~~~~~~~g~~~~~~---~~~~~~~~~l~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (523)
..+... . +...... .+...+ ...+.+.+. ..... +...+.++...+..+ ...
T Consensus 118 ~~~~~~-~------g~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~------- 174 (498)
T 2iid_A 118 NAWYFI-K------NIRKKVGEVKKDPGLL---KYPVKPSEAGKSAGQLYEESLGKVVEELKRT------NCS------- 174 (498)
T ss_dssp TSEEEE-T------TEEEEHHHHHHCGGGG---CCCCCGGGTTCCHHHHHHHHTHHHHHHHHHS------CHH-------
T ss_pred ccEEEe-C------CeeecccccccCcccc---ccCCCccccCCCHHHHHHHHHHHHHHHHhhc------cHH-------
Confidence 101000 0 1111000 000000 000111100 00000 111111111111000 000
Q ss_pred HhccccHHHHHHHHhhcHHHHHHhhcC-ChHHHHHHhhhhhccCCCCCCCcchHHHHHHHHhhcccCCCCceeecCCCHH
Q psy893 152 FTRRGEMKDVYSLLTCSAFSILNDWFE-SEPLKATLLTDGLIGAMVSPHSPSTSYVLLHHVMGGAEGVKGAWAYPEGGMG 230 (523)
Q Consensus 152 ~~~~~~~~~~~~~~~~s~~~~l~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~gG~~ 230 (523)
.....+...++.+++.+... ++.....+........ . ......-.+..... .. ....+.+++||++
T Consensus 175 -------~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~--~~-~~~~~~~~~gG~~ 241 (498)
T 2iid_A 175 -------YILNKYDTYSTKEYLIKEGDLSPGAVDMIGDLLNEDS-G--YYVSFIESLKHDDI--FA-YEKRFDEIVDGMD 241 (498)
T ss_dssp -------HHHHHHTTSBHHHHHHHTSCCCHHHHHHHHHHTTCGG-G--TTSBHHHHHHHHHH--HT-TCCCEEEETTCTT
T ss_pred -------HHHHHhhhhhHHHHHHHccCCCHHHHHHHHHhcCccc-c--hhHHHHHHHHHHhc--cc-cCcceEEeCCcHH
Confidence 00111223466677766431 2333222221110000 0 00111111111100 11 1223348899999
Q ss_pred HHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-eCCe----EEEcCEEEEcCChHHHHHhhCCCCCCCHHHHHH
Q psy893 231 AVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-TNGL----EIKAKYVLSNTTAKCTLLDLIPKGNLDERTTQA 305 (523)
Q Consensus 231 ~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~~g~----~~~ad~vI~a~~~~~~~~~ll~~~~~~~~~~~~ 305 (523)
.|+++|++.+.+ +|++|++|++|..++ +++ .|+ .+|+ +++||+||+|+|+..+ .++...+.+|+...+.
T Consensus 242 ~l~~~l~~~l~~---~i~~~~~V~~I~~~~-~~v-~v~~~~~~~~~~~~~ad~vI~t~p~~~~-~~i~f~p~Lp~~~~~a 315 (498)
T 2iid_A 242 KLPTAMYRDIQD---KVHFNAQVIKIQQND-QKV-TVVYETLSKETPSVTADYVIVCTTSRAV-RLIKFNPPLLPKKAHA 315 (498)
T ss_dssp HHHHHHHHHTGG---GEESSCEEEEEEECS-SCE-EEEEECSSSCCCEEEESEEEECSCHHHH-TTSEEESCCCHHHHHH
T ss_pred HHHHHHHHhccc---ccccCCEEEEEEECC-CeE-EEEEecCCcccceEEeCEEEECCChHHH-hheecCCCCCHHHHHH
Confidence 999999997754 799999999999987 665 465 5554 5899999999999974 5654344589888999
Q ss_pred HhcCCCCCCeEEEEEecCCCCcccCCCCCCCCCCCCCCcceEEeCCCCHHHHHHHHHHhhcCCCCCCCeEEEEcCCCCCC
Q psy893 306 VQSIDYASPVTKINVALKSIPNFLADPNPSENTVQPHHHGSIHLNCEDMQQVFDAYQDATQGIPSTRPMIEMVLPSSLDN 385 (523)
Q Consensus 306 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~~~s~~d~ 385 (523)
++++.+. ++.+|++.++++ .|.. ....+...+ .+ .|..++++++.
T Consensus 316 i~~l~~~-~~~kv~l~~~~~-~w~~----------~~~~~~~~~-~~-------------------~~~~~~~~~s~--- 360 (498)
T 2iid_A 316 LRSVHYR-SGTKIFLTCTTK-FWED----------DGIHGGKST-TD-------------------LPSRFIYYPNH--- 360 (498)
T ss_dssp HHHCCEE-CEEEEEEEESSC-GGGG----------GTCCSSEEE-ES-------------------STTCEEECCSS---
T ss_pred HHhCCCc-ceeEEEEEeCCC-CccC----------CCccCCccc-CC-------------------CCcceEEECCC---
Confidence 9999886 588999999874 3310 000011111 11 13334555542
Q ss_pred CCCCCCceEEEEEecccccCCCCCCCCCHHHHHHHHHHHHHHHHHhCCCCCCCe----EEeEecChhhHHHhcCCCCCcc
Q psy893 386 TLSPPGHHVCLLFTQFTPYKLAGDRDWTEEDKANYATNVFSSIEQYCPGFTQDI----VGYEILTPPDLEKEFGLTGGNI 461 (523)
Q Consensus 386 ~~ap~G~~~i~~~~~~~p~~~~~~~~~~~~~k~~~~~~~~~~l~~~~P~~~~~i----~~~~~~tP~~~~~~~~~~~G~~ 461 (523)
..|+|..++..++. .+.. ..|.....+++.+.+++.|+++++-..+.+ ....+ ..|.+. ....|+.
T Consensus 361 -~~p~g~~~L~~~~~-g~~a----~~~~~~~~~~~~~~~l~~L~~~~g~~~~~~~~~~~~~~~---~~W~~~-p~~~G~~ 430 (498)
T 2iid_A 361 -NFTNGVGVIIAYGI-GDDA----NFFQALDFKDCADIVFNDLSLIHQLPKKDIQSFCYPSVI---QKWSLD-KYAMGGI 430 (498)
T ss_dssp -CCTTSCEEEEEEEE-HHHH----HTTTTSCHHHHHHHHHHHHHHHHTCCHHHHHHHEEEEEE---EEGGGC-TTTCSSE
T ss_pred -CCCCCCcEEEEEeC-CccH----hhhhcCCHHHHHHHHHHHHHHHcCCChhhhhhhcCccEE---EecCCC-CCCCcee
Confidence 25777777665542 2110 124333557899999999999886221111 11111 234431 1233442
Q ss_pred ccCcccccccccCCCCCCCCCCCCCCCCCCeEecCCCCCC-CCCCCCc--cHHHHHHHHHHHhc
Q psy893 462 FHGALSLNQLLFNRPLPIQGPSSPFTLIPHLLLCGSGAHP-GGGVCGA--PGYIAAQMVNRLMR 522 (523)
Q Consensus 462 ~g~~~~~~q~~~~rp~~~~~~~~~~t~i~~LylaG~~~~p-g~g~~~a--sG~~aA~~i~~~~~ 522 (523)
... .+.+....++ ..+++++||||||+++.. .+++.|| ||.+||++|++.++
T Consensus 431 ~~~--~~~~~~~~~~-------~l~~p~~~l~fAGe~t~~~~g~~~GAi~SG~raA~~i~~~l~ 485 (498)
T 2iid_A 431 TTF--TPYQFQHFSD-------PLTASQGRIYFAGEYTAQAHGWIDSTIKSGLRAARDVNLASE 485 (498)
T ss_dssp ECC--CTTHHHHHHH-------HHHCCBTTEEECSGGGSSSSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred eec--CCcchHHHHH-------HHhCCCCcEEEEEcccccCCcCHHHHHHHHHHHHHHHHHHhc
Confidence 111 1112111112 335578999999999843 3456787 99999999998763
No 18
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=99.91 E-value=2.3e-23 Score=217.37 Aligned_cols=263 Identities=18% Similarity=0.172 Sum_probs=149.0
Q ss_pred CCChhHHHHHHHHHHcC-CcEEEEccCCCCCcceeeecccCCceeccchhhhhhhh-h---hhhccccccccCceEeecC
Q psy893 1 EAGHNGLVSAAYLARAG-LSVAVLERRHVLGGAAVTEEIIPGFQFSRASYLLSLLR-P---HIYKDLELKKHGLKLLTRD 75 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G-~~V~vlE~~~~~GG~~~s~~~~~G~~~d~g~~~~~~~~-~---~~~~~lgl~~~g~~~~~~~ 75 (523)
|||++||+||++|+++| ++|+|||+++++||+++|....+|+.+|.|++++.... . ....++++......+.
T Consensus 15 GaG~aGL~AA~~L~~~G~~~V~VlEa~~riGGr~~t~~~~~G~~~D~G~~~~~~~~~~~~~~~~~~lg~~~~~~~~~--- 91 (516)
T 1rsg_A 15 GAGIAGLKAASTLHQNGIQDCLVLEARDRVGGRLQTVTGYQGRKYDIGASWHHDTLTNPLFLEEAQLSLNDGRTRFV--- 91 (516)
T ss_dssp CCBHHHHHHHHHHHHTTCCSEEEECSSSSSBTTCCEEECGGGCEEESSCCEECCTTTCHHHHHHHHHHHHHCCCCEE---
T ss_pred CCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCceeeeecCCCcEEecCCeEEecCCCChHHHHHHHhCCCCcceeEE---
Confidence 89999999999999999 99999999999999999976337999999998865432 2 2233444321101111
Q ss_pred CCCcccCCCCcccCCCCceeecCCHHHHHHHHHccChhhHHHHHHHHHHHHHHHhHHHhhhhcCCCChhhHHHHHHHhcc
Q psy893 76 PRSYTPLSPDKWTNKAKSLTLGLDPQKNYEQIARFSVKDAQNFEKYDHHIEEITNLLDPLFDIAPHDFGNLLMYNLFTRR 155 (523)
Q Consensus 76 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (523)
+.+ +..+.+..+... ........+.++.+.+.++.+.. +.... .
T Consensus 92 -------~~~-----~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~------------- 135 (516)
T 1rsg_A 92 -------FDD-----DNFIYIDEERGR-------VDHDKELLLEIVDNEMSKFAELE---FHQHL-G------------- 135 (516)
T ss_dssp -------CCC-----CCCEEEETTTEE-------CTTCTTTCHHHHHHHHHHHHHHH---C-------------------
T ss_pred -------ECC-----CCEEEEcCCCcc-------ccccHHHHHHHHHHHHHHHHHHH---hhhcc-C-------------
Confidence 111 333322222110 00001111222222222222111 00000 0
Q ss_pred ccHHHHHHHHhhcHHHHHHhhcC------Ch----HHHHHHhhhhh-ccCCCCCCCcchHHHHHHHHhhcccCCCCceee
Q psy893 156 GEMKDVYSLLTCSAFSILNDWFE------SE----PLKATLLTDGL-IGAMVSPHSPSTSYVLLHHVMGGAEGVKGAWAY 224 (523)
Q Consensus 156 ~~~~~~~~~~~~s~~~~l~~~~~------~~----~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 224 (523)
....|+.+++.+++. .+ .+..++..... .+ ..+...++.+.+ .......+ +
T Consensus 136 --------~~d~s~~~~l~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~g--~~~~~~s~~~~~-------~~~~~~~~-~ 197 (516)
T 1rsg_A 136 --------VSDCSFFQLVMKYLLQRRQFLTNDQIRYLPQLCRYLELWHG--LDWKLLSAKDTY-------FGHQGRNA-F 197 (516)
T ss_dssp ----------CCBHHHHHHHHHHHHGGGSCHHHHHHHHHHHGGGHHHHT--BCTTTSBHHHHC-------CCCSSCCE-E
T ss_pred --------CCCCCHHHHHHHHHHHhhcccCHHHHHHHHHHHHHHHHHhC--CChHHCChHHHH-------hhccCcch-h
Confidence 001122222222211 00 11122221111 12 233344333321 11112233 6
Q ss_pred cCCCHHHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-eCCeEEEcCEEEEcCChHHHHHh----------hC
Q psy893 225 PEGGMGAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-TNGLEIKAKYVLSNTTAKCTLLD----------LI 293 (523)
Q Consensus 225 ~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~~g~~~~ad~vI~a~~~~~~~~~----------ll 293 (523)
++| ++.|+++|++.+.. ++|++|++|++|..++ +..+.|+ .+|++++||+||+|+|+..+... +.
T Consensus 198 ~~g-~~~l~~~l~~~l~~--~~i~~~~~V~~I~~~~-~~~v~v~~~~g~~~~ad~VI~t~p~~~l~~~~~~~~~~~~~i~ 273 (516)
T 1rsg_A 198 ALN-YDSVVQRIAQSFPQ--NWLKLSCEVKSITREP-SKNVTVNCEDGTVYNADYVIITVPQSVLNLSVQPEKNLRGRIE 273 (516)
T ss_dssp ESC-HHHHHHHHHTTSCG--GGEETTCCEEEEEECT-TSCEEEEETTSCEEEEEEEEECCCHHHHHGGGSSCSCSTTCCE
T ss_pred hhC-HHHHHHHHHHhCCC--CEEEECCEEEEEEEcC-CCeEEEEECCCcEEECCEEEECCCHHHhhhccccccccccceE
Confidence 778 99999999887643 6899999999999864 3334677 78888999999999999985321 21
Q ss_pred CCCCCCHHHHHHHhcCCCCCCeEEEEEecCCC
Q psy893 294 PKGNLDERTTQAVQSIDYASPVTKINVALKSI 325 (523)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 325 (523)
-.+.+|+...+.++++.+. ++.+|++.++++
T Consensus 274 f~P~Lp~~~~~ai~~~~~~-~~~Kv~l~f~~~ 304 (516)
T 1rsg_A 274 FQPPLKPVIQDAFDKIHFG-ALGKVIFEFEEC 304 (516)
T ss_dssp EESCCCHHHHHHTTSSCCC-CCEEEEEEESSC
T ss_pred ecCCCCHHHHHHHHhCCCC-cceEEEEEeCCC
Confidence 1235888889999999875 789999999875
No 19
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.88 E-value=1.5e-20 Score=191.83 Aligned_cols=398 Identities=16% Similarity=0.105 Sum_probs=212.9
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCCCCcceeeecccC---Cceeccchhhhhhh-hhhh---hccccccccCceEee
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHVLGGAAVTEEIIP---GFQFSRASYLLSLL-RPHI---YKDLELKKHGLKLLT 73 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~s~~~~~---G~~~d~g~~~~~~~-~~~~---~~~lgl~~~g~~~~~ 73 (523)
|||++||+||++|+++|++|+|||+++++||++.+.. .+ |+.++.|+.++... .+.+ ++++|+ +...
T Consensus 8 GaG~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~t~~-~~cipg~~~~~g~~~~~~~~~~~~~~~~~~~g~-----~~~~ 81 (431)
T 3k7m_X 8 GGGFSGLKAARDLTNAGKKVLLLEGGERLGGRAYSRE-SRNVPGLRVEIGGAYLHRKHHPRLAAELDRYGI-----PTAA 81 (431)
T ss_dssp CCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEEE-CSSSTTCEEESSCCCBCTTTCHHHHHHHHHHTC-----CEEE
T ss_pred CCcHHHHHHHHHHHHcCCeEEEEecCCCccCeeccee-ccCCCCceEecCCeeeCCCCcHHHHHHHHHhCC-----eeee
Confidence 8999999999999999999999999999999998875 45 88999998876544 4433 344443 3322
Q ss_pred cCCCCcccC-CCCcccCCCCceeecCCHHHHHHHHHccChhhHHHHHHHHHHHHHHHhHHHhhhhcCCCChhhHHHHHHH
Q psy893 74 RDPRSYTPL-SPDKWTNKAKSLTLGLDPQKNYEQIARFSVKDAQNFEKYDHHIEEITNLLDPLFDIAPHDFGNLLMYNLF 152 (523)
Q Consensus 74 ~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (523)
........+ ... +.......... ..... +.....++......+....+.....
T Consensus 82 ~~~~~~~~~~~~~-----~~~~~~~~~~~-----------~~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~------- 135 (431)
T 3k7m_X 82 ASEFTSFRHRLGP-----TAVDQAFPIPG-----------SEAVA---VEAATYTLLRDAHRIDLEKGLENQD------- 135 (431)
T ss_dssp CCCCCEECCBSCT-----TCCSSSSCCCG-----------GGHHH---HHHHHHHHHHHHTTCCTTTCTTSSS-------
T ss_pred cCCCCcEEEEecC-----CeecCCCCCCH-----------HHHHH---HHHHHHHHHHHHHhcCCCCCccCcc-------
Confidence 222111111 110 11111000000 11111 1111122222111111000000000
Q ss_pred hccccHHHHHHHHhhcHHHHHHhhcCChHHHHHHhhhhh--ccCCCCCCCcchHHHHHHHHhhc-cc----CCCCceeec
Q psy893 153 TRRGEMKDVYSLLTCSAFSILNDWFESEPLKATLLTDGL--IGAMVSPHSPSTSYVLLHHVMGG-AE----GVKGAWAYP 225 (523)
Q Consensus 153 ~~~~~~~~~~~~~~~s~~~~l~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~g~~~~~ 225 (523)
.. ... .++.+++.+....+..+.++..... .+ ..+.+.+.... +...... .. ...... .+
T Consensus 136 --~~------~~d-~s~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~s~~~~-~~~~~~~~~~~~~~~~~~~~-~~ 202 (431)
T 3k7m_X 136 --LE------DLD-IPLNEYVDKLDLPPVSRQFLLAWAWNMLG--QPADQASALWM-LQLVAAHHYSILGVVLSLDE-VF 202 (431)
T ss_dssp --CG------GGC-SBHHHHHHHHTCCHHHHHHHHHHHHHHHS--SCTTTSBHHHH-HHHHHHTTSCHHHHHHTCCE-EE
T ss_pred --hh------hhc-CCHHHHHHhcCCCHHHHHHHHHHHHHhcC--CChhhhhHHHH-HHHHHhcCCccceeecchhh-hc
Confidence 00 001 4666777777666666655433221 22 23333333222 1111100 00 011122 57
Q ss_pred CCCHHHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-eCCeEEEcCEEEEcCChHHHHHhhCCCCCCCHHHHH
Q psy893 226 EGGMGAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-TNGLEIKAKYVLSNTTAKCTLLDLIPKGNLDERTTQ 304 (523)
Q Consensus 226 ~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~~g~~~~ad~vI~a~~~~~~~~~ll~~~~~~~~~~~ 304 (523)
.+|+..+++.+++ +.| +|++|++|++|..++ ++++ |+ .+|++++||+||+|+++..+ .++.-.+.++....+
T Consensus 203 ~~g~~~l~~~~~~---~~g-~i~~~~~V~~i~~~~-~~v~-v~~~~g~~~~ad~vi~a~~~~~l-~~i~~~p~l~~~~~~ 275 (431)
T 3k7m_X 203 SNGSADLVDAMSQ---EIP-EIRLQTVVTGIDQSG-DVVN-VTVKDGHAFQAHSVIVATPMNTW-RRIVFTPALPERRRS 275 (431)
T ss_dssp TTCTHHHHHHHHT---TCS-CEESSCCEEEEECSS-SSEE-EEETTSCCEEEEEEEECSCGGGG-GGSEEESCCCHHHHH
T ss_pred CCcHHHHHHHHHh---hCC-ceEeCCEEEEEEEcC-CeEE-EEECCCCEEEeCEEEEecCcchH-hheeeCCCCCHHHHH
Confidence 8899888888776 556 999999999999877 6654 66 77878999999999999985 566444568888888
Q ss_pred HHhcCCCCCCeEEEEEecCCCCcccCCCCCCCCCCCCCCcceEEeCCCCHHHHHHHHHHhhcCCCCCCCeEEEEcCCCCC
Q psy893 305 AVQSIDYASPVTKINVALKSIPNFLADPNPSENTVQPHHHGSIHLNCEDMQQVFDAYQDATQGIPSTRPMIEMVLPSSLD 384 (523)
Q Consensus 305 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~~~s~~d 384 (523)
.++.+.+. ..++|++.++.+. . .++. ..+ . ....++-..+
T Consensus 276 ~~~~~~~~-~~~kv~~~~~~~~--------------~----~i~~-~~d---------------~-~~~~~~~~~~---- 315 (431)
T 3k7m_X 276 VIEEGHGG-QGLKILIHVRGAE--------------A----GIEC-VGD---------------G-IFPTLYDYCE---- 315 (431)
T ss_dssp HHHHCCCC-CEEEEEEEEESCC--------------T----TEEE-EBS---------------S-SSSEEEEEEE----
T ss_pred HHHhCCCc-ceEEEEEEECCCC--------------c----CceE-cCC---------------C-CEEEEEeCcC----
Confidence 88887665 5689999888642 0 1222 121 0 0122222211
Q ss_pred CCCCCCCceEEEEEecccccCCCCCCCCCHHHHHHHHHHHHHHHHHhCCCCCCCeEEeEecChhhHHHhcCCCCCccccC
Q psy893 385 NTLSPPGHHVCLLFTQFTPYKLAGDRDWTEEDKANYATNVFSSIEQYCPGFTQDIVGYEILTPPDLEKEFGLTGGNIFHG 464 (523)
Q Consensus 385 ~~~ap~G~~~i~~~~~~~p~~~~~~~~~~~~~k~~~~~~~~~~l~~~~P~~~~~i~~~~~~tP~~~~~~~~~~~G~~~g~ 464 (523)
.+++..++..++. .+. +..... +.+.+.|++++|++. .+... ...|... ....|+. ..
T Consensus 316 ---~~~~~~~l~~~~~-g~~-------~~~~~~----~~~~~~l~~~~~~~~--~~~~~---~~~W~~d-~~~~G~~-~~ 373 (431)
T 3k7m_X 316 ---VSESERLLVAFTD-SGS-------FDPTDI----GAVKDAVLYYLPEVE--VLGID---YHDWIAD-PLFEGPW-VA 373 (431)
T ss_dssp ---CSSSEEEEEEEEE-TTT-------CCTTCH----HHHHHHHHHHCTTCE--EEEEE---CCCTTTC-TTTSSSS-CC
T ss_pred ---CCCCCeEEEEEec-ccc-------CCCCCH----HHHHHHHHHhcCCCC--ccEeE---ecccCCC-CCCCCCC-CC
Confidence 1134444444432 111 111111 245667888898764 22111 1234432 1223442 21
Q ss_pred cccccccccCCCCCCCCCCCCCCCCCCeEecCCCCC--CCCCCCCc--cHHHHHHHHHHH
Q psy893 465 ALSLNQLLFNRPLPIQGPSSPFTLIPHLLLCGSGAH--PGGGVCGA--PGYIAAQMVNRL 520 (523)
Q Consensus 465 ~~~~~q~~~~rp~~~~~~~~~~t~i~~LylaG~~~~--pg~g~~~a--sG~~aA~~i~~~ 520 (523)
..+.+....+| ..+.|+.+|||||..+. ..+.+.|| ||.+||++|+-.
T Consensus 374 -~~~g~~~~~~~-------~l~~p~g~~~fAGe~t~~~~~g~~~GA~~sg~raa~~i~~~ 425 (431)
T 3k7m_X 374 -PRVGQFSRVHK-------ELGEPAGRIHFVGSDVSLEFPGYIEGALETAECAVNAILHS 425 (431)
T ss_dssp -CCTTTTTTSSG-------GGGSCBTTEEECSGGGCSSSTTSHHHHHHHHHHHHHHHHHC
T ss_pred -cCCCCCcccHH-------HHhCCCCcEEEEehhhhccCCeEehHHHHHHHHHHHHHHhh
Confidence 22333222223 45668899999996653 22345577 999999999864
No 20
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=99.87 E-value=8.3e-22 Score=203.17 Aligned_cols=413 Identities=15% Similarity=0.139 Sum_probs=220.4
Q ss_pred CCChhHHHHHHHHHHcC-CcEEEEccCCCCCcceeeecccCCceeccchhhhhhhhh---hhhccccccccCceEeecCC
Q psy893 1 EAGHNGLVSAAYLARAG-LSVAVLERRHVLGGAAVTEEIIPGFQFSRASYLLSLLRP---HIYKDLELKKHGLKLLTRDP 76 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G-~~V~vlE~~~~~GG~~~s~~~~~G~~~d~g~~~~~~~~~---~~~~~lgl~~~g~~~~~~~~ 76 (523)
|||++||+||++|+++| .+|+|+|+++++||++++....+|+.+|.|++++....+ .+++++. + ++.....
T Consensus 16 G~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~GG~~~~~~~~~g~~~~~g~~~~~~~~~~~~~l~~~~~-~----~~~~~~~ 90 (484)
T 4dsg_A 16 GAGPTGLGAAVRLTELGYKNWHLYECNDTPGGLSRSFLDENGFTWDLGGHVIFSHYQYFDDVMDWAV-Q----GWNVLQR 90 (484)
T ss_dssp CCSHHHHHHHHHHHHTTCCSEEEEESSSSSSGGGCEEECTTSCEEESSCCCBCCSBHHHHHHHHHHC-S----CEEEEEC
T ss_pred CcCHHHHHHHHHHHHcCCCCEEEEeCCCCCCCeeeeeecCCCcEEeeCCcccccChHHHHHHHHHHh-h----hhhhccC
Confidence 89999999999999999 799999999999999998533689999999887543333 3444442 2 1221111
Q ss_pred CCcccCCCCcccCCCCceeecCCHHHHHHHHHccChhhHHHHHHHHHHHHHHHhHHHhhhhcCCCChhhHHHHHHHhccc
Q psy893 77 RSYTPLSPDKWTNKAKSLTLGLDPQKNYEQIARFSVKDAQNFEKYDHHIEEITNLLDPLFDIAPHDFGNLLMYNLFTRRG 156 (523)
Q Consensus 77 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (523)
..+. ... |+.+.++-+. .+..+..... ...+..+...-.........++.++
T Consensus 91 ~~~~-~~~------g~~~~~P~~~-----~~~~l~~~~~------~~~~~~ll~~~~~~~~~~~~s~~e~---------- 142 (484)
T 4dsg_A 91 ESWV-WVR------GRWVPYPFQN-----NIHRLPEQDR------KRCLDELVRSHARTYTEPPNNFEES---------- 142 (484)
T ss_dssp CCEE-EET------TEEEESSGGG-----CGGGSCHHHH------HHHHHHHHHHHHCCCSSCCSSHHHH----------
T ss_pred ceEE-EEC------CEEEEeCccc-----hhhhCCHHHH------HHHHHHHHHHHhccCCCCCCCHHHH----------
Confidence 1111 111 5544443110 0111211111 0111111110000000011111111
Q ss_pred cHHHHHHHHhhcHHHHHHhhcCChHHHHHHhhhhh-ccC-CCCCCCcc-hHHHHHHHHhhccc----CCCCceeecC-CC
Q psy893 157 EMKDVYSLLTCSAFSILNDWFESEPLKATLLTDGL-IGA-MVSPHSPS-TSYVLLHHVMGGAE----GVKGAWAYPE-GG 228 (523)
Q Consensus 157 ~~~~~~~~~~~s~~~~l~~~~~~~~l~~~~~~~~~-~~~-~~~~~~~~-~~~~~~~~~~~~~~----~~~g~~~~~~-gG 228 (523)
. ...+.+.+.+.+-.+....++..... +.. ...+.-+. ....++...+.... ...+.+.||. ||
T Consensus 143 -----~---~~~~g~~~~~~~~~p~~~~v~~~~~~~ls~~~~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~f~yp~~gG 214 (484)
T 4dsg_A 143 -----F---TRQFGEGIADIFMRPYNFKVWAVPPCLMSTEWVEERVAPVDLERIRRNIQENRDDLGWGPNATFRFPQRGG 214 (484)
T ss_dssp -----H---HHHHHHHHCCCCCHHHHHHHHSSCGGGBCSSSCTTTSCCCCHHHHHHHHHHTCCCCCCSTTSEEEEESSSC
T ss_pred -----H---HHHhHHHHHHHHHHHHHhhhcCCCHHHhcHHHHhccccCCCHHHHHHHHhhcccccCCCccceEEeecCCC
Confidence 1 11112222222323333333322111 000 00011010 11112222221111 0123334554 99
Q ss_pred HHHHHHHHHHHHHHCCcEEEeC--ceeeEEEECCCCCeEEEE-eCCeEEEcCEEEEcCChHHHHHhhCCC--CCCCHHHH
Q psy893 229 MGAVSQALARSAQASGAQLFTS--QTVTEITLDSDKRASGVV-TNGLEIKAKYVLSNTTAKCTLLDLIPK--GNLDERTT 303 (523)
Q Consensus 229 ~~~l~~~l~~~~~~~G~~i~~~--~~V~~I~~~~~~~~~~v~-~~g~~~~ad~vI~a~~~~~~~~~ll~~--~~~~~~~~ 303 (523)
++.|+++|++.+.+ .+|+++ ++|++|..++ ++ |+ .+|+++.||+||+|+|++.+ .+++.+ ..+++...
T Consensus 215 ~~~l~~~la~~l~~--~~i~~~~~~~V~~I~~~~-~~---v~~~~G~~~~ad~VI~a~p~~~~-~~ll~~~~~~~~~~~~ 287 (484)
T 4dsg_A 215 TGIIYQAIKEKLPS--EKLTFNSGFQAIAIDADA-KT---ITFSNGEVVSYDYLISTVPFDNL-LRMTKGTGFKGYDEWP 287 (484)
T ss_dssp THHHHHHHHHHSCG--GGEEECGGGCEEEEETTT-TE---EEETTSCEEECSEEEECSCHHHH-HHHEECSSCTTGGGHH
T ss_pred HHHHHHHHHhhhhh--CeEEECCCceeEEEEecC-CE---EEECCCCEEECCEEEECCCHHHH-HHHhhccCCCCCHHHH
Confidence 99999999997754 279999 5699999876 53 45 77888999999999999996 467643 23667778
Q ss_pred HHHhcCCCCCCeEEEEEecCCCCcccCCCCCCCCCCCCCCcceEEeCCCCHHHHHHHHHHhhcCCCCCCCeEEEEcCCCC
Q psy893 304 QAVQSIDYASPVTKINVALKSIPNFLADPNPSENTVQPHHHGSIHLNCEDMQQVFDAYQDATQGIPSTRPMIEMVLPSSL 383 (523)
Q Consensus 304 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~~~s~~ 383 (523)
+.++++.|. ++.+|+++++.+... .....+ ++++ .+. +.++..++++++.
T Consensus 288 ~~l~~l~y~-s~~~v~l~~~~~~~~---------~~~~~~--~i~v-p~~-----------------~~~~~ri~~~s~~ 337 (484)
T 4dsg_A 288 AIADKMVYS-STNVIGIGVKGTPPP---------HLKTAC--WLYF-PED-----------------TSPFYRATVFSNY 337 (484)
T ss_dssp HHHHHCCEE-EEEEEEEEEESCCCG---------GGTTCC--EEEC-CST-----------------TCSCSEEECGGGT
T ss_pred HHHhCCCcC-ceEEEEEEEcCCCcc---------cCCCCe--EEEE-EcC-----------------CCeEEEEEeecCC
Confidence 888999886 789999999865310 001223 5665 221 1255567888889
Q ss_pred CCCCCCCCceEEEEEecccccCCCCCCCCCHHHHHHHHHHHHHHHHHhCCCCC--CCeEEeEecChhhHHHhcCCCCCcc
Q psy893 384 DNTLSPPGHHVCLLFTQFTPYKLAGDRDWTEEDKANYATNVFSSIEQYCPGFT--QDIVGYEILTPPDLEKEFGLTGGNI 461 (523)
Q Consensus 384 d~~~ap~G~~~i~~~~~~~p~~~~~~~~~~~~~k~~~~~~~~~~l~~~~P~~~--~~i~~~~~~tP~~~~~~~~~~~G~~ 461 (523)
+|.++|+|++++.+.+.... .|. ..++++.+.++++|.++. .++ +.++...+. .|...++ ....
T Consensus 338 ~p~~ap~g~~~l~~e~~~~~-------~~~-~~d~~l~~~a~~~L~~~~-~~~~~~~~~~~~v~---r~~~~yP--~y~~ 403 (484)
T 4dsg_A 338 SKYNVPEGHWSLMLEVSESK-------YKP-VNHSTLIEDCIVGCLASN-LLLPEDLLVSKWHY---RIEKGYP--TPFI 403 (484)
T ss_dssp CGGGSCTTEEEEEEEEEEBT-------TBC-CCTTSHHHHHHHHHHHTT-SCCTTCCEEEEEEE---EEEEEEE--CCBT
T ss_pred CcccCCCCeEEEEEEEecCc-------CCc-CCHHHHHHHHHHHHHHcC-CCCccceEEEEEEE---EeCcccc--CCCc
Confidence 99999999988766543111 121 234788999999999974 443 233322221 1111111 1111
Q ss_pred ccCcccccccccCCCCCCCCCCCCCCCCCCeEecCCCCCCCC---CCCCc--cHHHHHHHHH
Q psy893 462 FHGALSLNQLLFNRPLPIQGPSSPFTLIPHLLLCGSGAHPGG---GVCGA--PGYIAAQMVN 518 (523)
Q Consensus 462 ~g~~~~~~q~~~~rp~~~~~~~~~~t~i~~LylaG~~~~pg~---g~~~a--sG~~aA~~i~ 518 (523)
.+. ..+.++ ++ ... .. |||++|....... +++.| +|..||+.|+
T Consensus 404 ~~~-~~~~~~---~~-------~l~-~~-~l~~~Gr~g~~~y~v~~~d~~i~sg~~aa~~i~ 452 (484)
T 4dsg_A 404 GRN-NLLEKA---QP-------ELM-SR-CIYSRGRFGAWRYEVGNQDHSFMQGVEAIDHVL 452 (484)
T ss_dssp THH-HHHHHH---HH-------HHH-HT-TEEECSTTTTCCGGGCSHHHHHHHHHHHHHHHT
T ss_pred cHH-HHHHHH---HH-------HHH-hC-CcEeecCCcccccCCCChHHHHHHHHHHHHHHH
Confidence 000 001111 11 111 23 9999998542222 44545 9999999998
No 21
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=99.85 E-value=1.3e-20 Score=191.87 Aligned_cols=259 Identities=15% Similarity=0.103 Sum_probs=145.9
Q ss_pred CCChhHHHHHHHHHHcC-CcEEEEccCCCCCcceeeecccCCceeccchhhhhhhhh---hhhccccccccCceEeecCC
Q psy893 1 EAGHNGLVSAAYLARAG-LSVAVLERRHVLGGAAVTEEIIPGFQFSRASYLLSLLRP---HIYKDLELKKHGLKLLTRDP 76 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G-~~V~vlE~~~~~GG~~~s~~~~~G~~~d~g~~~~~~~~~---~~~~~lgl~~~g~~~~~~~~ 76 (523)
|||++||+||++|+++| ++|+|+|+++++||+++|.. .+|+.+|.|++++....+ .+++++|++. ...+.
T Consensus 13 GaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG~~~t~~-~~G~~~d~G~~~~~~~~~~~~~l~~~~g~~~-----~~~~~ 86 (424)
T 2b9w_A 13 GAGPAGLAAGMYLEQAGFHDYTILERTDHVGGKCHSPN-YHGRRYEMGAIMGVPSYDTIQEIMDRTGDKV-----DGPKL 86 (424)
T ss_dssp CCSHHHHHHHHHHHHTTCCCEEEECSSSCSSTTCCCCE-ETTEECCSSCCCBCTTCHHHHHHHHHHCCCC-----CSCCC
T ss_pred CcCHHHHHHHHHHHhCCCCcEEEEECCCCCCCcccccC-CCCcccccCceeecCCcHHHHHHHHHhCCcc-----ccccc
Confidence 89999999999999999 99999999999999999987 689999999887543323 4566666432 11111
Q ss_pred CCcccCCCCcccCCCCceeecCCHHHHHHHHHccChhhHHHHHHHHHHHHHHHhHHHhhhhcCCCChhhHHHHHHHhccc
Q psy893 77 RSYTPLSPDKWTNKAKSLTLGLDPQKNYEQIARFSVKDAQNFEKYDHHIEEITNLLDPLFDIAPHDFGNLLMYNLFTRRG 156 (523)
Q Consensus 77 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (523)
. ......+ |+.+....++... ..+...+.++...+...+...... . ......
T Consensus 87 ~-~~~~~~~-----g~~~~~~~~~~~~---------------~~~~~~~~~l~~~~~~~~~~~~~~--~-----~~~~~~ 138 (424)
T 2b9w_A 87 R-REFLHED-----GEIYVPEKDPVRG---------------PQVMAAVQKLGQLLATKYQGYDAN--G-----HYNKVH 138 (424)
T ss_dssp C-EEEECTT-----SCEECGGGCTTHH---------------HHHHHHHHHHHHHHHTTTTTTTSS--S-----SSSCCC
T ss_pred c-ceeEcCC-----CCEeccccCcccc---------------hhHHHHHHHHHHHHhhhhhhcccc--c-----chhhhh
Confidence 0 1111111 3322111111100 001111112211111100000000 0 000000
Q ss_pred cHHHHHHHHhhcHHHHHHhhcCChHHHHHHhhhhhccCCCCCCCcchHHHHHHHHh--hcc-cCCCCceeecCCCHHHHH
Q psy893 157 EMKDVYSLLTCSAFSILNDWFESEPLKATLLTDGLIGAMVSPHSPSTSYVLLHHVM--GGA-EGVKGAWAYPEGGMGAVS 233 (523)
Q Consensus 157 ~~~~~~~~~~~s~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~g~~~~~~gG~~~l~ 233 (523)
+.+..|+.+++.++..+. +...+........+..+.+.++.+.+ .+.. ... ....+.+ .+.||++.++
T Consensus 139 ------~~~~~s~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~a~~~~-~~~~~~~~~~~~~~~~~-~~~~g~~~l~ 209 (424)
T 2b9w_A 139 ------EDLMLPFDEFLALNGCEA-ARDLWINPFTAFGYGHFDNVPAAYVL-KYLDFVTMMSFAKGDLW-TWADGTQAMF 209 (424)
T ss_dssp ------GGGGSBHHHHHHHTTCGG-GHHHHTTTTCCCCCCCTTTSBHHHHH-HHSCHHHHHHHHHTCCB-CCTTCHHHHH
T ss_pred ------hhhccCHHHHHHhhCcHH-HHHHHHHHHHhhccCChHhcCHHHHH-HhhhHhhhhcccCCceE-EeCChHHHHH
Confidence 112357888888776544 33333222211222345555555532 2110 000 0122345 7899999999
Q ss_pred HHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-eCCeEEEcCEEEEcCChHHHHHhhCCCCCCCHHHHHHHhcCCCC
Q psy893 234 QALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-TNGLEIKAKYVLSNTTAKCTLLDLIPKGNLDERTTQAVQSIDYA 312 (523)
Q Consensus 234 ~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~~g~~~~ad~vI~a~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~ 312 (523)
++|.+.+ +.+|++|++|++|..++ +++. |+ .+| ++.||+||+|+++..+ .++++. . +..++.+.++.+.
T Consensus 210 ~~l~~~l---~~~v~~~~~V~~i~~~~-~~v~-v~~~~g-~~~ad~Vv~a~~~~~~-~~~l~~--~-~~~~~~~~~~~~~ 279 (424)
T 2b9w_A 210 EHLNATL---EHPAERNVDITRITRED-GKVH-IHTTDW-DRESDVLVLTVPLEKF-LDYSDA--D-DDEREYFSKIIHQ 279 (424)
T ss_dssp HHHHHHS---SSCCBCSCCEEEEECCT-TCEE-EEESSC-EEEESEEEECSCHHHH-TTSBCC--C-HHHHHHHTTCEEE
T ss_pred HHHHHhh---cceEEcCCEEEEEEEEC-CEEE-EEECCC-eEEcCEEEECCCHHHH-hhccCC--C-HHHHHHHhcCCcc
Confidence 9998865 56899999999999887 6664 76 666 4899999999999985 466643 2 3344456666553
No 22
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.83 E-value=3.4e-19 Score=175.88 Aligned_cols=229 Identities=14% Similarity=0.228 Sum_probs=145.0
Q ss_pred ecCCCHHHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-eCCeEEEcCEEEEcCChHHHHHhhCCC--CCCCH
Q psy893 224 YPEGGMGAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-TNGLEIKAKYVLSNTTAKCTLLDLIPK--GNLDE 300 (523)
Q Consensus 224 ~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~~g~~~~ad~vI~a~~~~~~~~~ll~~--~~~~~ 300 (523)
...+|+..+++.|++.+ |++|+++++|++|..++ +++. |+ .+|+++.||.||+|+|+..+ .+|+.+ +.+++
T Consensus 106 ~~~~g~~~l~~~l~~~~---g~~i~~~~~V~~i~~~~-~~~~-v~~~~g~~~~ad~vV~A~p~~~~-~~ll~~~~~~l~~ 179 (342)
T 3qj4_A 106 VAPQGISSIIKHYLKES---GAEVYFRHRVTQINLRD-DKWE-VSKQTGSPEQFDLIVLTMPVPEI-LQLQGDITTLISE 179 (342)
T ss_dssp ECTTCTTHHHHHHHHHH---TCEEESSCCEEEEEECS-SSEE-EEESSSCCEEESEEEECSCHHHH-TTCBSTHHHHSCH
T ss_pred ecCCCHHHHHHHHHHhc---CCEEEeCCEEEEEEEcC-CEEE-EEECCCCEEEcCEEEECCCHHHH-HHHhcccccccCH
Confidence 67889999999999865 89999999999999987 6654 66 67877899999999999985 578764 24667
Q ss_pred HHHHHHhcCCCCCCeEEEEEecCCCCcccCCCCCCCCCCCCCCcceEEeCCCCHHHHHHHHHHhhcCCCCCCCeEEEEcC
Q psy893 301 RTTQAVQSIDYASPVTKINVALKSIPNFLADPNPSENTVQPHHHGSIHLNCEDMQQVFDAYQDATQGIPSTRPMIEMVLP 380 (523)
Q Consensus 301 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~~~ 380 (523)
...+.++++.|. ++.+|++.++++. |+. .+ ..+. ++ .++ .+.-+++..
T Consensus 180 ~~~~~l~~~~~~-~~~~v~l~~~~~~-~~~---------~~-~~g~-~~-~~~------------------~~~~~~~~~ 227 (342)
T 3qj4_A 180 CQRQQLEAVSYS-SRYALGLFYEAGT-KID---------VP-WAGQ-YI-TSN------------------PCIRFVSID 227 (342)
T ss_dssp HHHHHHHTCCBC-CEEEEEEECSSCC---C---------CS-CSEE-EC-SSC------------------SSEEEEEEH
T ss_pred HHHHHHhcCCcc-ccEEEEEEECCCC-ccC---------Cc-eeeE-Ec-cCC------------------cceEEEEcc
Confidence 788899999887 8899999998641 211 11 1222 22 111 123344333
Q ss_pred CCCCCCCC-CCCceEEEEEecccccCCCCCCCCCHHHHHHHHHHHHHHHHHhCCCCCCCeEEeEecChhhHHHhcCCCCC
Q psy893 381 SSLDNTLS-PPGHHVCLLFTQFTPYKLAGDRDWTEEDKANYATNVFSSIEQYCPGFTQDIVGYEILTPPDLEKEFGLTGG 459 (523)
Q Consensus 381 s~~d~~~a-p~G~~~i~~~~~~~p~~~~~~~~~~~~~k~~~~~~~~~~l~~~~P~~~~~i~~~~~~tP~~~~~~~~~~~G 459 (523)
+.+ |.+. |++..++.+++. ..+. .++.+..++++.+.+++.|.++++... ..+...+. .|. +..|+.
T Consensus 228 ~~k-~~r~~~~~~~~~v~~~~-~~~~----~~~~~~~~~~~~~~~~~~l~~~~g~~~-~p~~~~v~---rW~--~a~p~~ 295 (342)
T 3qj4_A 228 NKK-RNIESSEIGPSLVIHTT-VPFG----VTYLEHSIEDVQELVFQQLENILPGLP-QPIATKCQ---KWR--HSQVTN 295 (342)
T ss_dssp HHH-TTCCCC-CCCEEEEEEC-HHHH----HHTTTSCHHHHHHHHHHHHHHHSCSCC-CCSEEEEE---EET--TCSBSS
T ss_pred ccC-CCCCCCCCCceEEEECC-HHHH----HHhhcCCHHHHHHHHHHHHHHhccCCC-CCceeeec---ccc--cccccc
Confidence 333 3332 333333444432 1111 112334568999999999999997433 22222221 222 111211
Q ss_pred ccccCcccccccccCCCCCCCCCCCCC--CCCCCeEecCCCCCCCCCCCCc--cHHHHHHHHHHHh
Q psy893 460 NIFHGALSLNQLLFNRPLPIQGPSSPF--TLIPHLLLCGSGAHPGGGVCGA--PGYIAAQMVNRLM 521 (523)
Q Consensus 460 ~~~g~~~~~~q~~~~rp~~~~~~~~~~--t~i~~LylaG~~~~pg~g~~~a--sG~~aA~~i~~~~ 521 (523)
+.. .+| ... ...+||++||||+. |+|+++| ||..||++|++.|
T Consensus 296 ---~~~--------~~~-------~~~~~~~~~~l~laGd~~~-g~~v~~ai~sg~~aa~~i~~~l 342 (342)
T 3qj4_A 296 ---AAA--------NCP-------GQMTLHHKPFLACGGDGFT-QSNFDGCITSALCVLEALKNYI 342 (342)
T ss_dssp ---CCS--------SSC-------SCEEEETTTEEEECSGGGS-CSSHHHHHHHHHHHHHHHTTC-
T ss_pred ---ccC--------CCc-------ceeEecCCccEEEEccccC-CCCccHHHHHHHHHHHHHHhhC
Confidence 110 122 222 36789999999984 5789988 9999999998754
No 23
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=99.83 E-value=6.5e-20 Score=185.53 Aligned_cols=259 Identities=13% Similarity=0.155 Sum_probs=159.9
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCCCCcceeeeccc-------------------CCceeccchhhhhhhhh--hhh
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHVLGGAAVTEEII-------------------PGFQFSRASYLLSLLRP--HIY 59 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~s~~~~-------------------~G~~~d~g~~~~~~~~~--~~~ 59 (523)
|+|++|+++|+.|+++|++|+|+||++++||+++++... .+|.+|.+++++....+ .++
T Consensus 27 G~G~~g~~~a~~l~~~g~~v~~~e~~~~~Gg~~~s~~~~~l~~~~~~g~~~~~~~g~~R~y~iDL~P~~l~~~g~L~~lL 106 (475)
T 3p1w_A 27 GTGLKECILSGLLSHYGKKILVLDRNPYYGGETASLNLTNLYNTFKPKENIPSKYGENRHWNVDLIPKFILVGGNLVKIL 106 (475)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECHHHHHHHHCTTSCCCGGGCCGGGCCEESSCCBEETTSHHHHHH
T ss_pred CCCHHHHHHHHHHHHCCCcEEEEeccCCCCCCccccchhhhhhhcccCCCcccccccccceEEeecCeEeecCcHHHHHH
Confidence 899999999999999999999999999999999887521 24677877766432222 455
Q ss_pred ccccccccCceEeecCCCCcccCCCCc--ccCCCCceeecCCHHHHHHHHHccChhhHHHHHHHHHHHHHHHhHHHhhhh
Q psy893 60 KDLELKKHGLKLLTRDPRSYTPLSPDK--WTNKAKSLTLGLDPQKNYEQIARFSVKDAQNFEKYDHHIEEITNLLDPLFD 137 (523)
Q Consensus 60 ~~lgl~~~g~~~~~~~~~~~~~~~~~~--~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (523)
.++++.++ ++|...++. |.....+. .+.+++.+.++.+...... ...+...+...+.+|+..+.++.+.-.....
T Consensus 107 ~~~gv~~y-lef~~~~~~-y~~~~~~~~~~~~~g~~~~VPss~~e~~~-~~lLs~~eK~~l~kFL~~l~~~~~~~~~~~~ 183 (475)
T 3p1w_A 107 KKTRVTNY-LEWLVVEGS-YVYQHQKKGFLTSEKFIHKVPATDMEALV-SPLLSLMEKNRCKNFYQYVSEWDANKRNTWD 183 (475)
T ss_dssp HHTTCGGG-SCEEECSEE-EEEEEECCCSSSCCEEEEECCCSHHHHHT-CTTSCHHHHHHHHHHHHHHHHCCTTCGGGST
T ss_pred HHCCchhe-eEEEecCcc-eEEecCccccccCCCceEeCCCCHHHHhh-ccCCCHHHHHHHHHHHHHHHhhhhccchhhh
Confidence 56677777 888776653 21110000 0001556666776443332 1334455666666666554432211000000
Q ss_pred cCCCChhhHHHHHHHhccccHHHHHHHHhhcHHHHHHhhcCChHHHHHHhhhhhccCCCCCCCcchHHHH---HHHHhhc
Q psy893 138 IAPHDFGNLLMYNLFTRRGEMKDVYSLLTCSAFSILNDWFESEPLKATLLTDGLIGAMVSPHSPSTSYVL---LHHVMGG 214 (523)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 214 (523)
.. +....|+.+|++++..++.++.++.....+.....+...++...+ ..+..+.
T Consensus 184 --~~---------------------~l~~~s~~e~l~~~gls~~l~~fl~~alaL~~~~~~~~~~a~~~l~ri~~y~~Sl 240 (475)
T 3p1w_A 184 --NL---------------------DPYKLTMLEIYKHFNLCQLTIDFLGHAVALYLNDDYLKQPAYLTLERIKLYMQSI 240 (475)
T ss_dssp --TC---------------------CTTTSBHHHHHHHTTCCHHHHHHHHHHTSCCSSSGGGGSBHHHHHHHHHHHHHHH
T ss_pred --cc---------------------cccCCCHHHHHHHcCCCHHHHHHHHHHHHhhcCCCcccCCHHHHHHHHHHHHHHH
Confidence 00 001357788898888888888766432211111111112222211 1111110
Q ss_pred ccCCCCceeecCCCHHHHHHHHHHHHHHCCcEEEeCceeeEEEE-CCCCCeEEEE-eCCeEEEcCEEEEcCChH
Q psy893 215 AEGVKGAWAYPEGGMGAVSQALARSAQASGAQLFTSQTVTEITL-DSDKRASGVV-TNGLEIKAKYVLSNTTAK 286 (523)
Q Consensus 215 ~~~~~g~~~~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~-~~~~~~~~v~-~~g~~~~ad~vI~a~~~~ 286 (523)
..+....+.||+||++.|+++|++.+++.|++|+++++|++|.. ++ +++++|+ .+|+++.||+||++++..
T Consensus 241 ~~yg~s~~~yp~gG~~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~-g~v~gV~~~~G~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 241 SAFGKSPFIYPLYGLGGIPEGFSRMCAINGGTFMLNKNVVDFVFDDD-NKVCGIKSSDGEIAYCDKVICDPSYV 313 (475)
T ss_dssp HHHSSCSEEEETTCTTHHHHHHHHHHHHC--CEESSCCEEEEEECTT-SCEEEEEETTSCEEEEEEEEECGGGC
T ss_pred hhcCCCceEEECCCHHHHHHHHHHHHHHcCCEEEeCCeEEEEEEecC-CeEEEEEECCCcEEECCEEEECCCcc
Confidence 01112234599999999999999999999999999999999999 55 8889999 788889999999998754
No 24
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=99.81 E-value=1.7e-18 Score=180.01 Aligned_cols=262 Identities=10% Similarity=0.090 Sum_probs=157.9
Q ss_pred hhhccccccccCceEeecCCCCcccCCCCcccCCCCceeecCCHHHHHHHHHccChhhHHHHHHHHHHHHHHHhHHHhhh
Q psy893 57 HIYKDLELKKHGLKLLTRDPRSYTPLSPDKWTNKAKSLTLGLDPQKNYEQIARFSVKDAQNFEKYDHHIEEITNLLDPLF 136 (523)
Q Consensus 57 ~~~~~lgl~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (523)
.++.++|+.++ ++|...+.. |. + . +|+.+.++.+....... ..+...+...+.+|+..+.++..
T Consensus 241 ~LL~~sgV~~y-LEFk~v~~~-y~-~-~-----~G~~~~VPas~~eif~s-~~Lsl~EKr~L~kFl~~~~~~~~------ 304 (650)
T 1vg0_A 241 DLLIKSNVSRY-AEFKNITRI-LA-F-R-----EGTVEQVPCSRADVFNS-KQLTMVEKRMLMKFLTFCVEYEE------ 304 (650)
T ss_dssp HHHHHHTGGGG-CCEEECCEE-EE-E-S-----SSSEEECCCSHHHHHHC-SSSCHHHHHHHHHHHHHHHTGGG------
T ss_pred HHHHHcCCcce-eeEEEccce-EE-e-c-----CCCEeECCCCHHHHHhC-cCCCHHHHHHHHHHHHHHHHhcc------
Confidence 34555566666 666654432 11 1 2 16666677776554443 44555566666565554433110
Q ss_pred hcCCCChhhHHHHHHHhccccHHHHHHHHhhcHHHHHHhhcCChHHHHHHhhhhhccCCCCCCCcchHHHH---HHHHhh
Q psy893 137 DIAPHDFGNLLMYNLFTRRGEMKDVYSLLTCSAFSILNDWFESEPLKATLLTDGLIGAMVSPHSPSTSYVL---LHHVMG 213 (523)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 213 (523)
.. ..+..+...|+.+++++++.++.++.++....... .....++...+ ..++..
T Consensus 305 -----~p---------------~~~~~~d~~S~~d~L~~~~ls~~L~~~L~~~lal~---~~~~~pa~~~l~~i~~~l~s 361 (650)
T 1vg0_A 305 -----HP---------------DEYRAYEGTTFSEYLKTQKLTPNLQYFVLHSIAMT---SETTSCTVDGLKATKKFLQC 361 (650)
T ss_dssp -----CH---------------HHHHTTTTSBHHHHHTTSSSCHHHHHHHHHHTTC-----CCSCBHHHHHHHHHHHHHH
T ss_pred -----Ch---------------HHHhhhccCCHHHHHHHhCCCHHHHHHHHHHHhcc---CCCCCchhHHHHHHHHHHHH
Confidence 00 01112245799999999999999999887533221 11212233222 222221
Q ss_pred cccCCCCceeecCCCHHHHHHHHHHHHHHCCcEEEeCceeeEEEECCC-CCeEEEE-eCCeEEEcCEEEEcCChHHHHHh
Q psy893 214 GAEGVKGAWAYPEGGMGAVSQALARSAQASGAQLFTSQTVTEITLDSD-KRASGVV-TNGLEIKAKYVLSNTTAKCTLLD 291 (523)
Q Consensus 214 ~~~~~~g~~~~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~-~~~~~v~-~~g~~~~ad~vI~a~~~~~~~~~ 291 (523)
...+..+.+.|+.||++.|+++|.+.++..|++|+++++|++|..+++ +++++|+ .+|+++.||+||++. ..
T Consensus 362 l~~yg~sg~~yp~GG~g~L~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~Ge~i~A~~VVs~~--~~---- 435 (650)
T 1vg0_A 362 LGRYGNTPFLFPLYGQGELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIED--SY---- 435 (650)
T ss_dssp TTSSSSSSEEEETTCTTHHHHHHHHHHHHTTCEEESSCCEEEEEEETTTCCEEEEEETTSCEEECSEEEEEG--GG----
T ss_pred HHhhccCceEEeCCchhHHHHHHHHHHHHcCCEEEeCCEeeEEEEeCCCCeEEEEEeCCCCEEEcCEEEECh--hh----
Confidence 111222345599999999999999999999999999999999998764 6788888 789999999999842 22
Q ss_pred hCCCCCCCHHHHHHHhcCCCCCCeEEEEEecCCCCcccCCCCCCCCCCCCCCcceEEeCCCCHHHHHHHHHHhhcCCCCC
Q psy893 292 LIPKGNLDERTTQAVQSIDYASPVTKINVALKSIPNFLADPNPSENTVQPHHHGSIHLNCEDMQQVFDAYQDATQGIPST 371 (523)
Q Consensus 292 ll~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~ 371 (523)
++.. + . .+..+ ..+..+.+.+++++.- ....++.+.+.+ +.. + | .
T Consensus 436 -lp~~-~----~---~~~~~-~~v~R~i~i~~~pi~~---------~~~~~~~~~iii-P~~-~-----------g---~ 480 (650)
T 1vg0_A 436 -LSEN-T----C---SRVQY-RQISRAVLITDGSVLR---------TDADQQVSILTV-PAE-E-----------P---G 480 (650)
T ss_dssp -BCTT-T----T---TTCCC-EEEEEEEEEESSCSSC---------CSCCCCCEEEEE-CCS-S-----------T---T
T ss_pred -cCHh-H----h---ccccc-cceEEEEEEecCCCCC---------cCCCcceEEEEc-cCc-c-----------C---C
Confidence 2221 1 0 11122 2567788888876521 111123334555 221 0 1 3
Q ss_pred CCeEEEEcCCCCCCCCCCCCceEEEEEe
Q psy893 372 RPMIEMVLPSSLDNTLSPPGHHVCLLFT 399 (523)
Q Consensus 372 ~~~~~v~~~s~~d~~~ap~G~~~i~~~~ 399 (523)
++.++++.+|. ++..+|+|++++++.+
T Consensus 481 ~~~V~i~~~Ss-~~~~cP~G~~Vv~lst 507 (650)
T 1vg0_A 481 SFAVRVIELCS-STMTCMKGTYLVHLTC 507 (650)
T ss_dssp SCCEEEEEECG-GGTSSCTTCEEEEEEE
T ss_pred CCCEEEEEeCC-CCCCCCCCCEEEEEEe
Confidence 47788888877 8899999999887654
No 25
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=99.81 E-value=6.7e-19 Score=190.56 Aligned_cols=248 Identities=15% Similarity=0.122 Sum_probs=142.5
Q ss_pred CceeecCCCHHHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-eC------CeEEEcCEEEEcCChHHHHHhh
Q psy893 220 GAWAYPEGGMGAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-TN------GLEIKAKYVLSNTTAKCTLLDL 292 (523)
Q Consensus 220 g~~~~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~~------g~~~~ad~vI~a~~~~~~~~~l 292 (523)
|.+..++||++.|+++|++ +.+|++|++|++|..++ +++ .|+ .+ |++++||+||+|+|+..+ .++
T Consensus 562 g~~~~~~gG~~~L~~aLa~-----~l~I~Lnt~V~~I~~~~-~gV-~V~~~~~~~~~~g~~i~AD~VIvTvPl~vL-k~l 633 (852)
T 2xag_A 562 GSHLTVRNGYSCVPVALAE-----GLDIKLNTAVRQVRYTA-SGC-EVIAVNTRSTSQTFIYKCDAVLCTLPLGVL-KQQ 633 (852)
T ss_dssp SCCEEETTCTTHHHHHHTT-----TCCEECSEEEEEEEEET-TEE-EEEEEESSSTTCEEEEEESEEEECCCHHHH-HCS
T ss_pred CceEEecCcHHHHHHHHHh-----CCCEEeCCeEEEEEEcC-CcE-EEEEeecccCCCCeEEECCEEEECCCHHHH-Hhh
Confidence 3344789999999999987 34799999999999987 554 355 44 568999999999999985 553
Q ss_pred C----CCCCCCHHHHHHHhcCCCCCCeEEEEEecCCCCcccCCCCCCCCCCCCCCcceEEeCCCCHHHHHHHHHHhhcCC
Q psy893 293 I----PKGNLDERTTQAVQSIDYASPVTKINVALKSIPNFLADPNPSENTVQPHHHGSIHLNCEDMQQVFDAYQDATQGI 368 (523)
Q Consensus 293 l----~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~ 368 (523)
+ ..+.+|....+.++++.+. ++.+|++.++++ .|. ....+.-++.... .
T Consensus 634 ~~~I~F~P~LP~~k~~AI~~l~~g-~v~KV~L~F~~~-fW~-----------~~~~~fG~l~~~~-~------------- 686 (852)
T 2xag_A 634 PPAVQFVPPLPEWKTSAVQRMGFG-NLNKVVLCFDRV-FWD-----------PSVNLFGHVGSTT-A------------- 686 (852)
T ss_dssp SCSSEEESCCCHHHHHHHHHSEEC-CCEEEEEECSSC-CSC-----------TTCCEEEECCSSS-T-------------
T ss_pred hcccccCCCCCHHHHHHHHcCCcc-ceEEEEEEcCCc-ccC-----------CCCCeeeeecccc-C-------------
Confidence 2 2345888888889999876 789999999864 341 0011112221110 0
Q ss_pred CCCCCeEEEEcCCCCCCCCCCCCceEEEEEecccccCCCCCCCCCHHHHHHHHHHHHHHHHHhCCCCC-CCeEEeEecCh
Q psy893 369 PSTRPMIEMVLPSSLDNTLSPPGHHVCLLFTQFTPYKLAGDRDWTEEDKANYATNVFSSIEQYCPGFT-QDIVGYEILTP 447 (523)
Q Consensus 369 ~~~~~~~~v~~~s~~d~~~ap~G~~~i~~~~~~~p~~~~~~~~~~~~~k~~~~~~~~~~l~~~~P~~~-~~i~~~~~~tP 447 (523)
..+.+++.+++. +..++..++. .+.. ..+.....+++.+.+++.|.++++... ..++...+.
T Consensus 687 --~~~~l~~~~~~~--------~~pvLl~~v~-G~~a----~~l~~lsdeel~~~~l~~L~~ifG~~~~~~P~~~~vt-- 749 (852)
T 2xag_A 687 --SRGELFLFWNLY--------KAPILLALVA-GEAA----GIMENISDDVIVGRCLAILKGIFGSSAVPQPKETVVS-- 749 (852)
T ss_dssp --TTTTTCEEEECS--------SSSEEEEEEC-HHHH----HHGGGSCHHHHHHHHHHHHHHHHCTTTCCCCSEEEEC--
T ss_pred --CCCceEEEecCC--------CCCEEEEEec-CcCH----HHHhcCCHHHHHHHHHHHHHHHhCccccCCceEEEEE--
Confidence 001111222211 1224544442 1110 112233458889999999999986432 233332222
Q ss_pred hhHHHhcCCCCCcccc--Ccccc-cccccCCCCCCCC-CCCCCCCCCCeEecCCCCCC--CCCCCCc--cHHHHHHHHHH
Q psy893 448 PDLEKEFGLTGGNIFH--GALSL-NQLLFNRPLPIQG-PSSPFTLIPHLLLCGSGAHP--GGGVCGA--PGYIAAQMVNR 519 (523)
Q Consensus 448 ~~~~~~~~~~~G~~~g--~~~~~-~q~~~~rp~~~~~-~~~~~t~i~~LylaG~~~~p--g~g~~~a--sG~~aA~~i~~ 519 (523)
.|.+. ....|+.-. ..... ..-...+|..... .+..+++.++|||||+.+.. .+.+.|| ||.+||++|++
T Consensus 750 -rW~~d-p~s~GsYs~~~pG~~~~~~~~L~~P~~~~~~~p~~~~~~grL~FAGE~Ts~~~~gtveGAi~SG~RAA~~Il~ 827 (852)
T 2xag_A 750 -RWRAD-PWARGSYSYVAAGSSGNDYDLMAQPITPGPSIPGAPQPIPRLFFAGEHTIRNYPATVHGALLSGLREAGRIAD 827 (852)
T ss_dssp -CTTTC-TTTSSSCEECBTTCCTTHHHHTTSCBCCCCSSTTCCCCCCCEEECSGGGCTTSTTSHHHHHHHHHHHHHHHHH
T ss_pred -ecCCC-CCcCccccccCCCcchhhHHHHhCccccccccccccCCCCcEEEEehhHhCCCCcCHHHHHHHHHHHHHHHHH
Confidence 34432 122343210 00000 0001122321000 00235577899999999864 2345577 99999999998
Q ss_pred Hh
Q psy893 520 LM 521 (523)
Q Consensus 520 ~~ 521 (523)
.+
T Consensus 828 ~l 829 (852)
T 2xag_A 828 QF 829 (852)
T ss_dssp HH
T ss_pred Hh
Confidence 76
No 26
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=99.81 E-value=6.5e-19 Score=188.32 Aligned_cols=249 Identities=14% Similarity=0.104 Sum_probs=143.3
Q ss_pred CceeecCCCHHHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-eC------CeEEEcCEEEEcCChHHHHHhh
Q psy893 220 GAWAYPEGGMGAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-TN------GLEIKAKYVLSNTTAKCTLLDL 292 (523)
Q Consensus 220 g~~~~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~~------g~~~~ad~vI~a~~~~~~~~~l 292 (523)
|.+..++||++.|+++|++ +.+|++|++|++|..++ +++ .|+ .+ |++++||+||+|+|+..+ .++
T Consensus 391 g~~~~~~gG~~~l~~~La~-----~l~I~l~~~V~~I~~~~-~~v-~V~~~~~~~~~~~~~~~Ad~VI~tvP~~vL-~~l 462 (662)
T 2z3y_A 391 GSHLTVRNGYSCVPVALAE-----GLDIKLNTAVRQVRYTA-SGC-EVIAVNTRSTSQTFIYKCDAVLCTLPLGVL-KQQ 462 (662)
T ss_dssp SCCEEETTCTTHHHHHHTT-----TCEEETTEEEEEEEEET-TEE-EEEEEESSCTTCEEEEEESEEEECCCHHHH-HCS
T ss_pred CceeeecCcHHHHHHHHHh-----cCceecCCeEEEEEECC-CcE-EEEEeecccCCCCeEEEeCEEEECCCHHHH-hcc
Confidence 3334789999999999886 46899999999999987 544 455 44 568999999999999985 553
Q ss_pred C----CCCCCCHHHHHHHhcCCCCCCeEEEEEecCCCCcccCCCCCCCCCCCCCCcceEEeCCCCHHHHHHHHHHhhcCC
Q psy893 293 I----PKGNLDERTTQAVQSIDYASPVTKINVALKSIPNFLADPNPSENTVQPHHHGSIHLNCEDMQQVFDAYQDATQGI 368 (523)
Q Consensus 293 l----~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~ 368 (523)
. -.+.+|+...+.++++.+. ++.+|++.++++ .|. . .....-++ ...
T Consensus 463 ~~~i~f~P~LP~~k~~Ai~~l~~g-~~~KV~l~f~~~-fW~--------~---~~~~~G~l-~~~--------------- 513 (662)
T 2z3y_A 463 PPAVQFVPPLPEWKTSAVQRMGFG-NLNKVVLCFDRV-FWD--------P---SVNLFGHV-GST--------------- 513 (662)
T ss_dssp SCSSEEESCCCHHHHHHHHHSEEC-CCEEEEEECSSC-CSC--------T---TCSEEEEC-CSS---------------
T ss_pred cCceEEcCCCCHHHHHHHHhCCcc-ceeEEEEEcCcc-ccc--------C---CCCceeee-cCC---------------
Confidence 1 2345888888889999876 789999999874 341 0 01111122 111
Q ss_pred CCCCCeEEEEcCCCCCCCCCCCCceEEEEEecccccCCCCCCCCCHHHHHHHHHHHHHHHHHhCCCCC-CCeEEeEecCh
Q psy893 369 PSTRPMIEMVLPSSLDNTLSPPGHHVCLLFTQFTPYKLAGDRDWTEEDKANYATNVFSSIEQYCPGFT-QDIVGYEILTP 447 (523)
Q Consensus 369 ~~~~~~~~v~~~s~~d~~~ap~G~~~i~~~~~~~p~~~~~~~~~~~~~k~~~~~~~~~~l~~~~P~~~-~~i~~~~~~tP 447 (523)
....+.+++.+++. +..++..++. .+.. ..+.....+++.+.+++.|.++++... ..++...+.
T Consensus 514 ~~~~~~~~~~~~~~--------~~~vL~~~~~-G~~a----~~~~~lsdee~~~~~l~~L~~~~g~~~~~~p~~~~v~-- 578 (662)
T 2z3y_A 514 TASRGELFLFWNLY--------KAPILLALVA-GEAA----GIMENISDDVIVGRCLAILKGIFGSSAVPQPKETVVS-- 578 (662)
T ss_dssp STTTTEEEEEECCS--------SSSEEEEEEC-THHH----HHHTTSCHHHHHHHHHHHHHHHHCTTSSCCCSEEEEC--
T ss_pred CCCCCceeEEEeCC--------CCCEEEEEec-cHhH----HHHHhCCHHHHHHHHHHHHHHHhCCcccCCCceeEEE--
Confidence 00123344443321 2234544442 1110 112223457888999999999986432 223322222
Q ss_pred hhHHHhcCCCCCccccCccc--c-cccccCCCCCCCC-CCCCCCCCCCeEecCCCCCC--CCCCCCc--cHHHHHHHHHH
Q psy893 448 PDLEKEFGLTGGNIFHGALS--L-NQLLFNRPLPIQG-PSSPFTLIPHLLLCGSGAHP--GGGVCGA--PGYIAAQMVNR 519 (523)
Q Consensus 448 ~~~~~~~~~~~G~~~g~~~~--~-~q~~~~rp~~~~~-~~~~~t~i~~LylaG~~~~p--g~g~~~a--sG~~aA~~i~~ 519 (523)
.|.+. ....|+.-..... . ..-...+|..... .+..+++.++|||||+.|.. .+.+.|| ||.+||++|++
T Consensus 579 -~W~~d-p~~~Gsys~~~pg~~~~~~~~l~~p~~~~~~~~~~~~~~grl~FAGe~ts~~~~g~v~GAi~SG~raA~~i~~ 656 (662)
T 2z3y_A 579 -RWRAD-PWARGSYSYVAAGSSGNDYDLMAQPITPGPSIPGAPQPIPRLFFAGEHTIRNYPATVHGALLSGLREAGRIAD 656 (662)
T ss_dssp -CTTTC-TTTSSSCEECBTTCCTHHHHHHHCCBCC---------CCCCEEECSGGGCTTSTTSHHHHHHHHHHHHHHHHH
T ss_pred -EECCC-CCCCcccccCCCCCchhhHHHHhCcCccccccccccCCCCcEEEEeccccCCCCcCHHHHHHHHHHHHHHHHH
Confidence 34432 2223432100000 0 0001122311000 00234577899999999864 2345577 99999999998
Q ss_pred Hhc
Q psy893 520 LMR 522 (523)
Q Consensus 520 ~~~ 522 (523)
.++
T Consensus 657 ~~~ 659 (662)
T 2z3y_A 657 QFL 659 (662)
T ss_dssp HHT
T ss_pred Hcc
Confidence 764
No 27
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=99.81 E-value=9.8e-19 Score=188.16 Aligned_cols=243 Identities=14% Similarity=0.088 Sum_probs=140.3
Q ss_pred CceeecCCCHHHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-eCCeEEEcCEEEEcCChHHHHHhhC-CCCC
Q psy893 220 GAWAYPEGGMGAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-TNGLEIKAKYVLSNTTAKCTLLDLI-PKGN 297 (523)
Q Consensus 220 g~~~~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~~g~~~~ad~vI~a~~~~~~~~~ll-~~~~ 297 (523)
+....+.+|++.++++|++ |++|+++++|++|..++ +++. |+ .+|+++.||+||+|+|+..+....+ ..+.
T Consensus 524 G~~~~~~~G~~~l~~aLa~-----gl~I~l~t~V~~I~~~~-~~v~-V~~~~G~~i~Ad~VIvA~P~~vL~~~~i~f~P~ 596 (776)
T 4gut_A 524 GDHTLLTPGYSVIIEKLAE-----GLDIQLKSPVQCIDYSG-DEVQ-VTTTDGTGYSAQKVLVTVPLALLQKGAIQFNPP 596 (776)
T ss_dssp SCEEECTTCTHHHHHHHHT-----TSCEESSCCEEEEECSS-SSEE-EEETTCCEEEESEEEECCCHHHHHTTCSEEESC
T ss_pred CCeEEECChHHHHHHHHHh-----CCcEEcCCeeEEEEEcC-CEEE-EEECCCcEEEcCEEEECCCHHHHhhcccccCCC
Confidence 3334788999999888875 67899999999999887 6654 66 7888899999999999988532222 2345
Q ss_pred CCHHHHHHHhcCCCCCCeEEEEEecCCCCcccCCCCCCCCCCCCCCcceEEeCCCCHHHHHHHHHHhhcCCCCCCCeEEE
Q psy893 298 LDERTTQAVQSIDYASPVTKINVALKSIPNFLADPNPSENTVQPHHHGSIHLNCEDMQQVFDAYQDATQGIPSTRPMIEM 377 (523)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v 377 (523)
+|+...+.++++.+. ++.+|++.++++ .|.. ......+.-++ ....+ ..+.+.+
T Consensus 597 Lp~~~~~ai~~l~~g-~~~KV~l~f~~~-FW~~--------~~~g~~~fG~l-~~~~~---------------~~~~~~~ 650 (776)
T 4gut_A 597 LSEKKMKAINSLGAG-IIEKIALQFPYR-FWDS--------KVQGADFFGHV-PPSAS---------------KRGLFAV 650 (776)
T ss_dssp CCHHHHHHHHHEEEE-CCEEEEEECSSC-TTHH--------HHTTCSEEEEC-CSSGG---------------GTTEEEE
T ss_pred CCHHHHHHHHhCCCe-eEEEEEEecCcc-cccc--------cCCCCceEEee-cCCcC---------------CCceEEE
Confidence 888888889988765 788999999864 3310 00000111112 11100 1233333
Q ss_pred EcCCCCCCCCCCCCc-eEEEEEecccccCCCCCCCCCHHHHHHHHHHHHHHHHHhCCCCC-CCeEEeEecChhhHHHhcC
Q psy893 378 VLPSSLDNTLSPPGH-HVCLLFTQFTPYKLAGDRDWTEEDKANYATNVFSSIEQYCPGFT-QDIVGYEILTPPDLEKEFG 455 (523)
Q Consensus 378 ~~~s~~d~~~ap~G~-~~i~~~~~~~p~~~~~~~~~~~~~k~~~~~~~~~~l~~~~P~~~-~~i~~~~~~tP~~~~~~~~ 455 (523)
... ..|+|. .++..++..... ..+.....+++.+.+++.|.++++... ...+...+. .|.+. .
T Consensus 651 ~~d------~~p~g~~~vL~~~i~G~~a-----~~l~~lsdeel~~~~l~~L~~ifg~~~~~~P~~~~vt---~W~~d-p 715 (776)
T 4gut_A 651 FYD------MDPQKKHSVLMSVIAGEAV-----ASVRTLDDKQVLQQCMATLRELFKEQEVPDPTKYFVT---RWSTD-P 715 (776)
T ss_dssp EEE------SCTTSCSCEEEEEECTHHH-----HHHHTSCHHHHHHHHHHHHHHHTTTSCCCCCSEEEEC---CGGGC-T
T ss_pred Eec------CCCCCCceEEEEEecchhH-----HHHHcCCHHHHHHHHHHHHHHHhCcccccCcceEEEe---cCCCC-C
Confidence 322 134443 444444421100 012222458899999999999997432 222222222 35442 2
Q ss_pred CCCCccccCcccccccccCCCCCCCCCCCCCCC-CCCeEecCCCCCCC--CCCCCc--cHHHHHHHHHH
Q psy893 456 LTGGNIFHGALSLNQLLFNRPLPIQGPSSPFTL-IPHLLLCGSGAHPG--GGVCGA--PGYIAAQMVNR 519 (523)
Q Consensus 456 ~~~G~~~g~~~~~~q~~~~rp~~~~~~~~~~t~-i~~LylaG~~~~pg--~g~~~a--sG~~aA~~i~~ 519 (523)
...|+.-.. .+.+.....+ ....| .++|||||+++++. +.+.|| ||.+||++|++
T Consensus 716 ~s~Gsys~~--~~g~~~~~~~-------~L~~p~~grL~FAGE~Ts~~~~gtveGAi~SG~RaA~~Ila 775 (776)
T 4gut_A 716 WIQMAYSFV--KTGGSGEAYD-------IIAEDIQGTVFFAGEATNRHFPQTVTGAYLSGVREASKIAA 775 (776)
T ss_dssp TTCCSEEEE--BTTCCTHHHH-------HHHCCBTTTEEECSGGGCSSSCSSHHHHHHHHHHHHHHHHC
T ss_pred ccCCCCCcc--CCCCchhHHH-------HHhCcCCCcEEEEehhhcCCCCcCHHHHHHHHHHHHHHHHh
Confidence 223432110 0000000000 11223 37899999999642 345577 99999999974
No 28
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=99.78 E-value=2.4e-18 Score=181.11 Aligned_cols=99 Identities=12% Similarity=0.032 Sum_probs=75.4
Q ss_pred eeecCCCHHHHHHHHHHHHHHCCcEEEeCceee--EEEECCCCC-----eEEEE--eCCe--EEEcCEEEEcCChHHHHH
Q psy893 222 WAYPEGGMGAVSQALARSAQASGAQLFTSQTVT--EITLDSDKR-----ASGVV--TNGL--EIKAKYVLSNTTAKCTLL 290 (523)
Q Consensus 222 ~~~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~--~I~~~~~~~-----~~~v~--~~g~--~~~ad~vI~a~~~~~~~~ 290 (523)
+..+.||++.|+++|++.+.+ |++|+++++|+ +|..++++. .+.|. .+|+ +++||+||+|+|+..+..
T Consensus 339 ~~~i~GG~~~L~~aLa~~l~~-g~~I~l~~~V~~~~I~~~~~g~~~~~~~V~V~~~~~G~~~~~~aD~VIvTvP~~~L~~ 417 (721)
T 3ayj_A 339 YTLPVTENVEFIRNLFLKAQN-VGAGKLVVQVRQERVANACHSGTASARAQLLSYDSHNAVHSEAYDFVILAVPHDQLTP 417 (721)
T ss_dssp ECCSSSSTHHHHHHHHHHHHH-HTTTSEEEEEECEEEEEEEECSSSSCCEEEEEEETTCCEEEEEESEEEECSCHHHHHH
T ss_pred eeEECCcHHHHHHHHHHhccc-CCceEeCCEEEeeeEEECCCCCccccceEEEEEecCCceEEEEcCEEEECCCHHHHhh
Confidence 448999999999999998753 67799999999 999865231 24463 5666 789999999999988532
Q ss_pred -----hhC----------------------CCCCC-C-------HHHHHHHhcCCCCCCeEEEEEec
Q psy893 291 -----DLI----------------------PKGNL-D-------ERTTQAVQSIDYASPVTKINVAL 322 (523)
Q Consensus 291 -----~ll----------------------~~~~~-~-------~~~~~~~~~~~~~~~~~~v~~~~ 322 (523)
++- .++.+ | ....+.+++++|. +..||++.+
T Consensus 418 ~~~r~~i~~~~~~~~~~~~~~~~~~~~~~~~pplLlp~~~~~~~~~~~~Ai~~l~~~-~s~Kv~l~~ 483 (721)
T 3ayj_A 418 IVSRSGFEHAASQNLGDAGLGLETHTYNQVYPPLLLSDSSPAANARIVTAIGQLHMA-RSSKVFATV 483 (721)
T ss_dssp HHSSSCSSCEEEEEESCGGGTCCCEEEEEEBCSSCCCSSCHHHHHHHHHHHHTCCEE-CEEEEEEEE
T ss_pred ccccccccccccccccccccccccccccccCCcccCCcccccccHHHHHHHHhcCcc-cceEEEEEE
Confidence 121 12224 7 7888899999886 678999999
No 29
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=99.69 E-value=7.4e-17 Score=160.16 Aligned_cols=243 Identities=13% Similarity=0.080 Sum_probs=135.7
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCCCCcceeeecccCCceec-cchhhhhhhhhhh---hccccccccCceEeecCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHVLGGAAVTEEIIPGFQFS-RASYLLSLLRPHI---YKDLELKKHGLKLLTRDP 76 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~s~~~~~G~~~d-~g~~~~~~~~~~~---~~~lgl~~~g~~~~~~~~ 76 (523)
|||++||+||++|+++|++|+|+|+++++||.+.+.. .+|+.++ .|++++....+.+ +++++.. .....
T Consensus 8 G~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~-~~g~~~~~~G~~~~~~~~~~~~~~~~~l~~~------~~~~~ 80 (367)
T 1i8t_A 8 GSGLFGAVCANELKKLNKKVLVIEKRNHIGGNAYTED-CEGIQIHKYGAHIFHTNDKYIWDYVNDLVEF------NRFTN 80 (367)
T ss_dssp CCSHHHHHHHHHHGGGTCCEEEECSSSSSSGGGCEEE-ETTEEEETTSCCCEEESCHHHHHHHHTTSCB------CCCCC
T ss_pred CcCHHHHHHHHHHHhCCCcEEEEecCCCCCcceEeec-cCCceeeccCCceecCCCHHHHHHHHHhhhh------hhccc
Confidence 8999999999999999999999999999999999887 5799885 8988865544443 3344321 11111
Q ss_pred CCcccCCCCcccCCCCceeecCCHHHHHHHHHccChhhHHHHHHHHHHHHHHHhHHHhhhhcCCCChhhHHHHHHHhccc
Q psy893 77 RSYTPLSPDKWTNKAKSLTLGLDPQKNYEQIARFSVKDAQNFEKYDHHIEEITNLLDPLFDIAPHDFGNLLMYNLFTRRG 156 (523)
Q Consensus 77 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (523)
... ...+ |+.+.++.+...+...+....+. .+.++... ... .. ...
T Consensus 81 ~~~-~~~~------g~~~~~p~~~~~~~~l~~~~~~~---~~~~~l~~---~~~---~~-~~~----------------- 126 (367)
T 1i8t_A 81 SPL-AIYK------DKLFNLPFNMNTFHQMWGVKDPQ---EAQNIINA---QKK---KY-GDK----------------- 126 (367)
T ss_dssp CCE-EEET------TEEEESSBSHHHHHHHHCCCCHH---HHHHHHHH---HTT---TT-CCC-----------------
T ss_pred cce-EEEC------CeEEEcCCCHHHHHHHhccCCHH---HHHHHHHH---Hhh---cc-CCC-----------------
Confidence 111 1112 66666666654433333222211 11111111 100 00 000
Q ss_pred cHHHHHHHHhhcHHHHHHhhcCChHHHHHHhhhh--hccCCCCCCCcchHHHH-HHHHhhc-ccCCCCce-eecCCCHHH
Q psy893 157 EMKDVYSLLTCSAFSILNDWFESEPLKATLLTDG--LIGAMVSPHSPSTSYVL-LHHVMGG-AEGVKGAW-AYPEGGMGA 231 (523)
Q Consensus 157 ~~~~~~~~~~~s~~~~l~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~g~~-~~~~gG~~~ 231 (523)
...|+.+++.+.+.++..+.++.... .++ .+|.+.++.+.. +...... .....+.| ++|+||+++
T Consensus 127 --------~~~s~~~~~~~~~g~~~~~~~~~p~~~~~~~--~~~~~lsa~~~~~l~~~~~~~~~~~~~~~~~~p~gG~~~ 196 (367)
T 1i8t_A 127 --------VPENLEEQAISLVGEDLYQALIKGYTEKQWG--RSAKELPAFIIKRIPVRFTFDNNYFSDRYQGIPVGGYTK 196 (367)
T ss_dssp --------CCCSHHHHHHHHHHHHHHHHHTHHHHHHHHS--SCGGGSCTTSSCCCCBCSSSCCCSCCCSEEECBTTCHHH
T ss_pred --------CCccHHHHHHHHHhHHHHHHHHHHHHhhhhC--CChHHcCHHHHhhceeeeccccccccchhhcccCCCHHH
Confidence 01244445544444333333332222 122 244433322210 0000000 00113344 389999999
Q ss_pred HHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEEeCCeEEEcCEEEEcCChHHHHHhhCCCCCCCHHHHHHHhcCCC
Q psy893 232 VSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVVTNGLEIKAKYVLSNTTAKCTLLDLIPKGNLDERTTQAVQSIDY 311 (523)
Q Consensus 232 l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~~~g~~~~ad~vI~a~~~~~~~~~ll~~~~~~~~~~~~~~~~~~ 311 (523)
++++|++ |++|++|++|.+|.. . | ++.+|+||+|+|+..++ ++ .+.+++|
T Consensus 197 l~~~l~~-----g~~i~l~~~V~~i~~---~----v-----~~~~D~VV~a~p~~~~~-~~------------~l~~l~y 246 (367)
T 1i8t_A 197 LIEKMLE-----GVDVKLGIDFLKDKD---S----L-----ASKAHRIIYTGPIDQYF-DY------------RFGALEY 246 (367)
T ss_dssp HHHHHHT-----TSEEECSCCGGGSHH---H----H-----HTTEEEEEECSCHHHHT-TT------------TTCCCCE
T ss_pred HHHHHhc-----CCEEEeCCceeeech---h----h-----hccCCEEEEeccHHHHH-HH------------hhCCCCC
Confidence 9999987 689999999988851 1 1 13589999999998853 22 1334556
Q ss_pred CCCeEEEEEecCCC
Q psy893 312 ASPVTKINVALKSI 325 (523)
Q Consensus 312 ~~~~~~v~~~~~~~ 325 (523)
. +...+.+.++..
T Consensus 247 ~-s~~~v~~~~d~~ 259 (367)
T 1i8t_A 247 R-SLKFETERHEFP 259 (367)
T ss_dssp E-EEEEEEEEESSS
T ss_pred c-eEEEEEEEeccc
Confidence 4 667777777753
No 30
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.65 E-value=2.9e-15 Score=147.23 Aligned_cols=221 Identities=14% Similarity=0.153 Sum_probs=129.9
Q ss_pred ecCCCHHHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-eCCeEE-EcCEEEEcCChHHHHHhhCCCCCCCHH
Q psy893 224 YPEGGMGAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-TNGLEI-KAKYVLSNTTAKCTLLDLIPKGNLDER 301 (523)
Q Consensus 224 ~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~~g~~~-~ad~vI~a~~~~~~~~~ll~~~~~~~~ 301 (523)
....|+..+.+.|.+ |++|+++++|++|..++ +++ .|+ .+|+.+ +||.||+|+++..+ .+++.. .+.
T Consensus 104 ~~~~~~~~l~~~l~~-----g~~i~~~~~v~~i~~~~-~~~-~v~~~~g~~~~~a~~vV~a~g~~~~-~~~~~~---~~~ 172 (336)
T 1yvv_A 104 VGKPGMSAITRAMRG-----DMPVSFSCRITEVFRGE-EHW-NLLDAEGQNHGPFSHVIIATPAPQA-STLLAA---APK 172 (336)
T ss_dssp EESSCTHHHHHHHHT-----TCCEECSCCEEEEEECS-SCE-EEEETTSCEEEEESEEEECSCHHHH-GGGGTT---CHH
T ss_pred EcCccHHHHHHHHHc-----cCcEEecCEEEEEEEeC-CEE-EEEeCCCcCccccCEEEEcCCHHHH-HHhhcc---CHH
Confidence 445678888777765 78999999999999887 554 466 677665 49999999999986 466643 345
Q ss_pred HHHHHhcCCCCCCeEEEEEecCCCCcccCCCCCCCCCCCCCCcceEEeCCCCHHHHHHHHHHhhcCCCCCCCeEEEEcCC
Q psy893 302 TTQAVQSIDYASPVTKINVALKSIPNFLADPNPSENTVQPHHHGSIHLNCEDMQQVFDAYQDATQGIPSTRPMIEMVLPS 381 (523)
Q Consensus 302 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~~~s 381 (523)
....+.++.|. +..++++.++++. +. + +. ..++ .+ .|..++...+
T Consensus 173 l~~~~~~~~~~-~~~~~~~~~~~~~-~~-----------~-~~-~~~~-~~-------------------~~~~~l~~~~ 217 (336)
T 1yvv_A 173 LASVVAGVKMD-PTWAVALAFETPL-QT-----------P-MQ-GCFV-QD-------------------SPLDWLARNR 217 (336)
T ss_dssp HHHHHTTCCEE-EEEEEEEEESSCC-SC-----------C-CC-EEEE-CS-------------------SSEEEEEEGG
T ss_pred HHHHHhhcCcc-ceeEEEEEecCCC-CC-----------C-CC-eEEe-CC-------------------CceeEEEecC
Confidence 66777888776 7888888888652 21 1 11 2232 11 2433443322
Q ss_pred CCCCCCCCCCceEEEEEecccccCCCCCCCCCHHHHHHHHHHHHHHHHHhCCCCCCCeEEeEecChhhHHHhcCCCCCcc
Q psy893 382 SLDNTLSPPGHHVCLLFTQFTPYKLAGDRDWTEEDKANYATNVFSSIEQYCPGFTQDIVGYEILTPPDLEKEFGLTGGNI 461 (523)
Q Consensus 382 ~~d~~~ap~G~~~i~~~~~~~p~~~~~~~~~~~~~k~~~~~~~~~~l~~~~P~~~~~i~~~~~~tP~~~~~~~~~~~G~~ 461 (523)
..|.+.+.+.. +.++.. ..+ . ..+.+...+++.+++++.+.++++.-........+ ..|. +..+.+.
T Consensus 218 -~~p~~~~~~~~-~v~~~~-~~~--~--~~~~~~~~~~~~~~l~~~l~~~lg~~~~~p~~~~~---~rw~--~a~~~~~- 284 (336)
T 1yvv_A 218 -SKPERDDTLDT-WILHAT-SQW--S--RQNLDASREQVIEHLHGAFAELIDCTMPAPVFSLA---HRWL--YARPAGA- 284 (336)
T ss_dssp -GSTTCCCSSEE-EEEEEC-HHH--H--HHTTTSCHHHHHHHHHHHHHTTCSSCCCCCSEEEE---EEEE--EEEESSC-
T ss_pred -cCCCCCCCCcE-EEEEeC-HHH--H--HHHHhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEc---cccC--ccCCCCC-
Confidence 22443343333 223321 111 0 01222345788889999999887521111111111 0111 0000000
Q ss_pred ccCcccccccccCCCCCCCCCCCCCCCCCCeEecCCCCCCCCCCCCc--cHHHHHHHHHHHhc
Q psy893 462 FHGALSLNQLLFNRPLPIQGPSSPFTLIPHLLLCGSGAHPGGGVCGA--PGYIAAQMVNRLMR 522 (523)
Q Consensus 462 ~g~~~~~~q~~~~rp~~~~~~~~~~t~i~~LylaG~~~~pg~g~~~a--sG~~aA~~i~~~~~ 522 (523)
..+ . ....+.++|+||||+++ |+|+.+| ||..+|+.|++.+.
T Consensus 285 ------------~~~----~--~~~~~~~rl~laGDa~~-g~gv~~a~~sg~~lA~~l~~~~~ 328 (336)
T 1yvv_A 285 ------------HEW----G--ALSDADLGIYVCGDWCL-SGRVEGAWLSGQEAARRLLEHLQ 328 (336)
T ss_dssp ------------CCC----S--CEEETTTTEEECCGGGT-TSSHHHHHHHHHHHHHHHHHHTT
T ss_pred ------------CCC----C--eeecCCCCEEEEecCCC-CCCHHHHHHHHHHHHHHHHHHhh
Confidence 000 0 11234589999999996 4688887 99999999998764
No 31
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=99.61 E-value=2.6e-16 Score=158.15 Aligned_cols=246 Identities=13% Similarity=0.084 Sum_probs=136.4
Q ss_pred CCChhHHHHHHHHHHc-CCcEEEEccCCCCCcceeeeccc-CCcee-ccchhhhhhhhhh---hhccccccccCceEeec
Q psy893 1 EAGHNGLVSAAYLARA-GLSVAVLERRHVLGGAAVTEEII-PGFQF-SRASYLLSLLRPH---IYKDLELKKHGLKLLTR 74 (523)
Q Consensus 1 GaG~~GL~aA~~La~~-G~~V~vlE~~~~~GG~~~s~~~~-~G~~~-d~g~~~~~~~~~~---~~~~lgl~~~g~~~~~~ 74 (523)
|||++||+||++|+++ |++|+|+|+++++||++.+.... +|+.+ +.|++++....+. +++++++- ...
T Consensus 14 GaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~~~~~~~~~~g~~~~~~G~~~~~~~~~~~~~~~~~~g~~------~~~ 87 (399)
T 1v0j_A 14 GSGFFGLTIAERVATQLDKRVLVLERRPHIGGNAYSEAEPQTGIEVHKYGAHLFHTSNKRVWDYVRQFTDF------TDY 87 (399)
T ss_dssp CCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGGGCEEECTTTCCEEETTSCCCEEESCHHHHHHHTTTCCB------CCC
T ss_pred CCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeeeccccCCCEEEEeCCCcEEcCCcHHHHHHHHHhhhh------hcc
Confidence 8999999999999999 99999999999999999998732 78887 5898886554553 44555431 111
Q ss_pred CCCCcccCCCCcccCCCCceeecCCHHHHHHHHHcc-ChhhHHHHHHHHHHHHHHHhHHHhhhhcCCCChhhHHHHHHHh
Q psy893 75 DPRSYTPLSPDKWTNKAKSLTLGLDPQKNYEQIARF-SVKDAQNFEKYDHHIEEITNLLDPLFDIAPHDFGNLLMYNLFT 153 (523)
Q Consensus 75 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (523)
....+ ... +|+.+.++.+...+...+... .+.+ ... .+... .... ...
T Consensus 88 ~~~~~-~~~------~G~~~~~p~~~~~~~~l~~~~~~~~~---~~~---~l~~~---~~~~---~~~------------ 136 (399)
T 1v0j_A 88 RHRVF-AMH------NGQAYQFPMGLGLVSQFFGKYFTPEQ---ARQ---LIAEQ---AAEI---DTA------------ 136 (399)
T ss_dssp CCCEE-EEE------TTEEEEESSSHHHHHHHHTSCCCHHH---HHH---HHHHH---GGGS---CTT------------
T ss_pred ccceE-EEE------CCEEEeCCCCHHHHHHHhcccCCHHH---HHH---HHHHH---hhcc---CCC------------
Confidence 11101 111 266667666654332222211 1111 110 11111 1110 000
Q ss_pred ccccHHHHHHHHhhcHHHHHHhhcCChHHHHHHhhhh--hccCCCCCCCcchHHHH-HHHHhhc-ccCCCCce-eecCCC
Q psy893 154 RRGEMKDVYSLLTCSAFSILNDWFESEPLKATLLTDG--LIGAMVSPHSPSTSYVL-LHHVMGG-AEGVKGAW-AYPEGG 228 (523)
Q Consensus 154 ~~~~~~~~~~~~~~s~~~~l~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~g~~-~~~~gG 228 (523)
...|+.+++.+.+.++.++.++.... .++ ..|.+.++.+.. +...... .......+ ++|+||
T Consensus 137 -----------~~~s~~e~l~~~~g~~~~~~~~~~~~~~~~~--~~~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~p~gG 203 (399)
T 1v0j_A 137 -----------DAQNLEEKAISLIGRPLYEAFVKGYTAKQWQ--TDPKELPAANITRLPVRYTFDNRYFSDTYEGLPTDG 203 (399)
T ss_dssp -----------C----CCHHHHHHCHHHHHHHTHHHHHHHHT--SCGGGSCGGGCSCCCCCSSSCCCSCCCSEEECBTTH
T ss_pred -----------CcccHHHHHHHHHhHHHHHHHHHHHHHhhcC--CChhhcChHhhhcceeEeccccchhhhhhccccccc
Confidence 01244455555555554444443322 122 233333322210 0000000 00011123 389999
Q ss_pred HHHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEEeCCeEE-EcCEEEEcCChHHHHHhhCCCCCCCHHHHHHHh
Q psy893 229 MGAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVVTNGLEI-KAKYVLSNTTAKCTLLDLIPKGNLDERTTQAVQ 307 (523)
Q Consensus 229 ~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~~~g~~~-~ad~vI~a~~~~~~~~~ll~~~~~~~~~~~~~~ 307 (523)
+++|+++|++ +.|++|++|++|++|.. . | + ++ .||+||+|+|+..++ ++. ++
T Consensus 204 ~~~l~~~l~~---~~g~~I~l~~~V~~I~~---~----v--~--~~~~aD~VI~t~p~~~l~-~~~------------l~ 256 (399)
T 1v0j_A 204 YTAWLQNMAA---DHRIEVRLNTDWFDVRG---Q----L--R--PGSPAAPVVYTGPLDRYF-DYA------------EG 256 (399)
T ss_dssp HHHHHHHHTC---STTEEEECSCCHHHHHH---H----H--T--TTSTTCCEEECSCHHHHT-TTT------------TC
T ss_pred HHHHHHHHHh---cCCeEEEECCchhhhhh---h----h--h--hcccCCEEEECCcHHHHH-hhh------------hC
Confidence 9999999988 56899999999999863 1 1 1 34 699999999999853 441 23
Q ss_pred cCCCCCCeEEEEEecCC
Q psy893 308 SIDYASPVTKINVALKS 324 (523)
Q Consensus 308 ~~~~~~~~~~v~~~~~~ 324 (523)
++.|. ++..+.+.++.
T Consensus 257 ~l~y~-s~~~~~~~~~~ 272 (399)
T 1v0j_A 257 RLGWR-TLDFEVEVLPI 272 (399)
T ss_dssp CCCEE-EEEEEEEEESS
T ss_pred CCCcc-eEEEEEEEEcc
Confidence 45554 55667777764
No 32
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=99.47 E-value=2.9e-14 Score=142.25 Aligned_cols=239 Identities=12% Similarity=0.095 Sum_probs=137.3
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCCCCcceeeeccc-CCcee-ccchhhhhhhhhhh---hccccccccCceEeecC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHVLGGAAVTEEII-PGFQF-SRASYLLSLLRPHI---YKDLELKKHGLKLLTRD 75 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~s~~~~-~G~~~-d~g~~~~~~~~~~~---~~~lgl~~~g~~~~~~~ 75 (523)
|||++||++|+.|+++|++|+|+|+++++||++.+.... +|+.+ |.|++++....+.+ +++++. +....
T Consensus 10 G~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~~~~~g~~~~~~G~~~~~~~~~~~~~~~~~l~~------~~~~~ 83 (384)
T 2bi7_A 10 GAGFSGAVIGRQLAEKGHQVHIIDQRDHIGGNSYDARDSETNVMVHVYGPHIFHTDNETVWNYVNKHAE------MMPYV 83 (384)
T ss_dssp CCSHHHHHHHHHHHTTTCEEEEEESSSSSSGGGCEEECTTTCCEEETTSCCCEEESCHHHHHHHHTTSC------EEECC
T ss_pred CcCHHHHHHHHHHHHCCCcEEEEEecCCcCCccccccccCCCceEeeCCceEECCCCHHHHHHHHHHhh------hcccc
Confidence 899999999999999999999999999999999987622 78886 89998876555544 444432 11111
Q ss_pred CCCcccCCCCcccCCCCceeecCCHHHHHHHHHcc-ChhhHHHHHHHHHHHHHHHhHHHhhhhcCCCChhhHHHHHHHhc
Q psy893 76 PRSYTPLSPDKWTNKAKSLTLGLDPQKNYEQIARF-SVKDAQNFEKYDHHIEEITNLLDPLFDIAPHDFGNLLMYNLFTR 154 (523)
Q Consensus 76 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (523)
...+ ...+ |+.+.++.+...+...+... .+.+ ..++ +... ......
T Consensus 84 ~~~~-~~~~------g~~~~~P~~~~~~~~l~~~~~~~~~---~~~~---l~~~-------~~~~~~------------- 130 (384)
T 2bi7_A 84 NRVK-ATVN------GQVFSLPINLHTINQFFSKTCSPDE---ARAL---IAEK-------GDSTIA------------- 130 (384)
T ss_dssp CCEE-EEET------TEEEEESCCHHHHHHHTTCCCCHHH---HHHH---HHHH-------SCCSCS-------------
T ss_pred cceE-EEEC------CEEEECCCChhHHHHHhcccCCHHH---HHHH---HHHh-------hhccCC-------------
Confidence 1111 1112 66667777654433222211 1111 1111 1111 000000
Q ss_pred cccHHHHHHHHhhcHHHHHHhhcCChHHHHHHhhhh--hccCCCCCCCcchHHHH-HHHHhh-cccCCCCce-eecCCCH
Q psy893 155 RGEMKDVYSLLTCSAFSILNDWFESEPLKATLLTDG--LIGAMVSPHSPSTSYVL-LHHVMG-GAEGVKGAW-AYPEGGM 229 (523)
Q Consensus 155 ~~~~~~~~~~~~~s~~~~l~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~g~~-~~~~gG~ 229 (523)
...++.+++.+.+.++.++.++.... .++ ..|.+.++.+.. +..... ...+..+.| .+|+||+
T Consensus 131 ----------~~~sl~e~~~~~~g~~~~~~~~~p~~~~~~~--~~~~~ls~~~~~r~~~~~~~~~~~~~~~~~~~p~gG~ 198 (384)
T 2bi7_A 131 ----------DPQTFEEEALRFIGKELYEAFFKGYTIKQWG--MQPSELPASILKRLPVRFNYDDNYFNHKFQGMPKCGY 198 (384)
T ss_dssp ----------SCCBHHHHHHHHHCHHHHHHHTHHHHHHHHS--SCGGGSBGGGCCSCCCCSSSCCCSCCCSEEEEETTHH
T ss_pred ----------CCcCHHHHHHHhhcHHHHHHHHHHHHHHHhC--CCHHHhCHHHHhccccccccccccccccccEEECcCH
Confidence 11355666666655555554443222 122 344443332210 000000 001112344 3899999
Q ss_pred HHHHHHHHHHHHHCCcEEEeCceee-EEEECCCCCeEEEEeCCeEEEcCEEEEcCChHHHHHhhCCCCCCCHHHHHHHhc
Q psy893 230 GAVSQALARSAQASGAQLFTSQTVT-EITLDSDKRASGVVTNGLEIKAKYVLSNTTAKCTLLDLIPKGNLDERTTQAVQS 308 (523)
Q Consensus 230 ~~l~~~l~~~~~~~G~~i~~~~~V~-~I~~~~~~~~~~v~~~g~~~~ad~vI~a~~~~~~~~~ll~~~~~~~~~~~~~~~ 308 (523)
++++++|++ +.|++|++|++|. +|.. .+|+||+|+++..++ +++ +.+
T Consensus 199 ~~l~~~l~~---~~g~~I~l~~~V~~~i~~----------------~~d~VI~a~p~~~~~-~~~------------lg~ 246 (384)
T 2bi7_A 199 TQMIKSILN---HENIKVDLQREFIVEERT----------------HYDHVFYSGPLDAFY-GYQ------------YGR 246 (384)
T ss_dssp HHHHHHHHC---STTEEEEESCCCCGGGGG----------------GSSEEEECSCHHHHT-TTT------------TCC
T ss_pred HHHHHHHHh---cCCCEEEECCeeehhhhc----------------cCCEEEEcCCHHHHH-Hhh------------cCC
Confidence 999999987 4689999999998 6631 299999999999864 432 234
Q ss_pred CCCCCCeEEEEEecC
Q psy893 309 IDYASPVTKINVALK 323 (523)
Q Consensus 309 ~~~~~~~~~v~~~~~ 323 (523)
+.|. +...+.+.++
T Consensus 247 l~y~-s~~~v~~~~d 260 (384)
T 2bi7_A 247 LGYR-TLDFKKFTYQ 260 (384)
T ss_dssp CCEE-EEEEEEEEEE
T ss_pred CCcc-eEEEEEEEeC
Confidence 5555 5666677776
No 33
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=99.42 E-value=1.1e-12 Score=129.03 Aligned_cols=66 Identities=32% Similarity=0.435 Sum_probs=54.3
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccC-CCCCcceeeecc---------cCCceeccchhhhhhhhh---hhhccccccc
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERR-HVLGGAAVTEEI---------IPGFQFSRASYLLSLLRP---HIYKDLELKK 66 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~-~~~GG~~~s~~~---------~~G~~~d~g~~~~~~~~~---~~~~~lgl~~ 66 (523)
|||++||+||+.|+++|++|+|||++ +++||++.+... ..|+.+|.|++++....+ .+++++|+..
T Consensus 51 GAGiaGL~aA~~L~~~G~~V~VlE~~~~~vGGr~~t~~~~~~~~~~~~~~~~~~e~G~~~~~~~~~~~~~~~~~lGl~~ 129 (376)
T 2e1m_A 51 GAGIAGLVAGDLLTRAGHDVTILEANANRVGGRIKTFHAKKGEPSPFADPAQYAEAGAMRLPSFHPLTLALIDKLGLKR 129 (376)
T ss_dssp CCBHHHHHHHHHHHHTSCEEEEECSCSSCCBTTCCEECCCTTSCCSSSSTTCCEESSCCCEETTCHHHHHHHHHTTCCE
T ss_pred CCCHHHHHHHHHHHHCCCcEEEEeccccccCCceeeecccccccccccCCCcEEecCceeecchHHHHHHHHHHcCCCc
Confidence 89999999999999999999999999 999999998762 257889999877544333 4677777653
No 34
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=99.42 E-value=1.1e-13 Score=137.45 Aligned_cols=240 Identities=13% Similarity=0.109 Sum_probs=135.3
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCCCCcceeeecccCCcee-ccchhhhhhhhh---hhhccccccccCceEeecCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHVLGGAAVTEEIIPGFQF-SRASYLLSLLRP---HIYKDLELKKHGLKLLTRDP 76 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~s~~~~~G~~~-d~g~~~~~~~~~---~~~~~lgl~~~g~~~~~~~~ 76 (523)
|||++||+||+.|+++|++|+|+|+++++||.+.+....+|+.+ +.|++++....+ .++++++. +.....
T Consensus 36 GaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~~G~~~~~~G~~~~~~~~~~~~~~~~~~~~------~~~~~~ 109 (397)
T 3hdq_A 36 GAGFAGSVLAERLASSGQRVLIVDRRPHIGGNAYDCYDDAGVLIHPYGPHIFHTNSKDVFEYLSRFTE------WRPYQH 109 (397)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGCCEECTTSCEECTTSCCCCEESCHHHHHHHHTSCC------EEECCC
T ss_pred CccHHHHHHHHHHHHCCCceEEEeccCCCCCccceeeccCCceEeecCCcccCCChHHHHHHHHHhhh------cccccc
Confidence 89999999999999999999999999999999988653578864 999988654444 34455542 111110
Q ss_pred CCcccCCCCcccCCCCceeecCCHHHHHHHHH-ccChhhHHHHHHHHHHHHHHHhHHHhhhhcCCCChhhHHHHHHHhcc
Q psy893 77 RSYTPLSPDKWTNKAKSLTLGLDPQKNYEQIA-RFSVKDAQNFEKYDHHIEEITNLLDPLFDIAPHDFGNLLMYNLFTRR 155 (523)
Q Consensus 77 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (523)
. .....+ |+.+.++.+...+...+. .+.+. ....+.. . ...+..
T Consensus 110 ~-~~~~~~------g~l~~lP~~~~~~~~l~~~~~~~~---~~~~~l~----------~-~~~~~~-------------- 154 (397)
T 3hdq_A 110 R-VLASVD------GQLLPIPINLDTVNRLYGLNLTSF---QVEEFFA----------S-VAEKVE-------------- 154 (397)
T ss_dssp B-EEEEET------TEEEEESCCHHHHHHHHTCCCCHH---HHHHHHH----------H-HCCCCS--------------
T ss_pred c-ceEEEC------CEEEEcCCChHHHHHhhccCCCHH---HHHHHHh----------h-cccCCC--------------
Confidence 0 001112 777777776543322221 11111 1111111 0 000000
Q ss_pred ccHHHHHHHHhhcHHHHHHhhcCChHHHHHHhhhhh--ccCCCCCCCcchHHHHHHHHhhcc--c--CCCCce-eecCCC
Q psy893 156 GEMKDVYSLLTCSAFSILNDWFESEPLKATLLTDGL--IGAMVSPHSPSTSYVLLHHVMGGA--E--GVKGAW-AYPEGG 228 (523)
Q Consensus 156 ~~~~~~~~~~~~s~~~~l~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~g~~-~~~~gG 228 (523)
...|+.+|+.+.+.....+.++..... ++ ..+.+.++.+. ..+-... + +..+.+ ++|+||
T Consensus 155 ---------~~~s~~e~~~~~~G~~~~e~~~~py~~k~~~--~~~~~Lsa~~~--~Rvp~~~~~d~~yf~~~~qg~P~gG 221 (397)
T 3hdq_A 155 ---------QVRTSEDVVVSKVGRDLYNKFFRGYTRKQWG--LDPSELDASVT--ARVPTRTNRDNRYFADTYQAMPLHG 221 (397)
T ss_dssp ---------SCCBHHHHHHHHHHHHHHHHHTHHHHHHHHS--SCGGGSBTTTG--GGSCCCSSCCCBSCCCSEEEEETTC
T ss_pred ---------CCcCHHHHHHHhcCHHHHHHHHHHHhCchhC--CCHHHHHHHHH--HhcCcccccCccchhhhheeccCCC
Confidence 013555565555554444444443321 22 34444433211 0000000 0 111233 379999
Q ss_pred HHHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEEeCCeEEEcCEEEEcCChHHHHHhhCCCCCCCHHHHHHHhc
Q psy893 229 MGAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVVTNGLEIKAKYVLSNTTAKCTLLDLIPKGNLDERTTQAVQS 308 (523)
Q Consensus 229 ~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~~~g~~~~ad~vI~a~~~~~~~~~ll~~~~~~~~~~~~~~~ 308 (523)
+.+|+++|++ ..|++|++|++|.+| + .++.+|+||+|+|....+ +. .+.+
T Consensus 222 y~~l~e~l~~---~~g~~V~l~~~v~~~-----~---------~~~~~d~vI~T~P~d~~~-~~------------~~g~ 271 (397)
T 3hdq_A 222 YTRMFQNMLS---SPNIKVMLNTDYREI-----A---------DFIPFQHMIYTGPVDAFF-DF------------CYGK 271 (397)
T ss_dssp HHHHHHHHTC---STTEEEEESCCGGGT-----T---------TTSCEEEEEECSCHHHHT-TT------------TTCC
T ss_pred HHHHHHHHHh---ccCCEEEECCeEEec-----c---------ccccCCEEEEcCCHHHHH-HH------------hcCC
Confidence 9999999876 569999999999743 1 134689999999987743 11 1234
Q ss_pred CCCCCCeEEEEEecCCC
Q psy893 309 IDYASPVTKINVALKSI 325 (523)
Q Consensus 309 ~~~~~~~~~v~~~~~~~ 325 (523)
+.|. |+..+.++++..
T Consensus 272 L~yr-sl~~~~~~~~~~ 287 (397)
T 3hdq_A 272 LPYR-SLEFRHETHDTE 287 (397)
T ss_dssp CCEE-EEEEEEEEESSS
T ss_pred CCCc-eEEEEEEEeccc
Confidence 5554 677788888754
No 35
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.09 E-value=8.5e-10 Score=109.31 Aligned_cols=58 Identities=12% Similarity=0.150 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-eCC--eEEEcCEEEEcCChHH
Q psy893 229 MGAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-TNG--LEIKAKYVLSNTTAKC 287 (523)
Q Consensus 229 ~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~~g--~~~~ad~vI~a~~~~~ 287 (523)
...+.+.|.+.++++|++|+++++|++|..++ ++++.|+ .+| .+++||.||+|++.+.
T Consensus 149 ~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~-~~~~~v~~~~g~~~~~~a~~VV~A~G~~s 209 (369)
T 3dme_A 149 SHALMLAYQGDAESDGAQLVFHTPLIAGRVRP-EGGFELDFGGAEPMTLSCRVLINAAGLHA 209 (369)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEECT-TSSEEEEECTTSCEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHCCCEEECCCEEEEEEEcC-CceEEEEECCCceeEEEeCEEEECCCcch
Confidence 46899999999999999999999999999987 5544577 666 4899999999999986
No 36
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=98.99 E-value=4.3e-09 Score=104.74 Aligned_cols=56 Identities=20% Similarity=0.239 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-eCCeEEEcCEEEEcCChHH
Q psy893 229 MGAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-TNGLEIKAKYVLSNTTAKC 287 (523)
Q Consensus 229 ~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~~g~~~~ad~vI~a~~~~~ 287 (523)
...++..|.+.++++|++|+++++|++|..++ ++ +.|+ .+| ++.||+||+|++++.
T Consensus 153 ~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~-~~-~~V~t~~g-~i~a~~VV~A~G~~s 209 (381)
T 3nyc_A 153 TDALHQGYLRGIRRNQGQVLCNHEALEIRRVD-GA-WEVRCDAG-SYRAAVLVNAAGAWC 209 (381)
T ss_dssp HHHHHHHHHHHHHHTTCEEESSCCCCEEEEET-TE-EEEECSSE-EEEESEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCEEEEEEEeC-Ce-EEEEeCCC-EEEcCEEEECCChhH
Confidence 46899999999999999999999999999887 55 5677 555 899999999999986
No 37
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=98.95 E-value=1.6e-08 Score=101.00 Aligned_cols=63 Identities=16% Similarity=0.250 Sum_probs=50.4
Q ss_pred HHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE--eCCe--EEEcCEEEEcCChHHHHHhhCC
Q psy893 231 AVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV--TNGL--EIKAKYVLSNTTAKCTLLDLIP 294 (523)
Q Consensus 231 ~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~--~~g~--~~~ad~vI~a~~~~~~~~~ll~ 294 (523)
.+-..|.+.+.+.|++++++++|+.+..++ ++++++. .+++ +++||.||-|-+.+..+.+.+.
T Consensus 103 ~~~~~L~~~a~~~G~~~~~~~~v~~~~~~~-~~~~~v~~~~~~~~~~~~a~~vIgAdG~~S~vr~~~g 169 (397)
T 3oz2_A 103 KFDKHLAALAAKAGADVWVKSPALGVIKEN-GKVAGAKIRHNNEIVDVRAKMVIAADGFESEFGRWAG 169 (397)
T ss_dssp HHHHHHHHHHHHHTCEEESSCCEEEEEEET-TEEEEEEEEETTEEEEEEEEEEEECCCTTCHHHHHHT
T ss_pred HHHHHHHHHHHhcCcEEeeeeeeeeeeecc-ceeeeeeecccccceEEEEeEEEeCCccccHHHHHcC
Confidence 566778888888999999999999999988 7777776 4554 6889999999888765555543
No 38
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=98.93 E-value=7.3e-09 Score=105.31 Aligned_cols=63 Identities=21% Similarity=0.264 Sum_probs=55.8
Q ss_pred HHHHHHHHHHHHHHCCcEEEeCc---eeeEEEECCCCCeEEEE-eCCeEEEcCEEEEcCChHHHHHhhCC
Q psy893 229 MGAVSQALARSAQASGAQLFTSQ---TVTEITLDSDKRASGVV-TNGLEIKAKYVLSNTTAKCTLLDLIP 294 (523)
Q Consensus 229 ~~~l~~~l~~~~~~~G~~i~~~~---~V~~I~~~~~~~~~~v~-~~g~~~~ad~vI~a~~~~~~~~~ll~ 294 (523)
...++..|.+.++++|++|++++ +|++|..++ +++++|+ .+|+++.||.||+|++.+. ..|++
T Consensus 160 ~~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~-~~v~gV~t~~G~~i~Ad~VV~AtG~~s--~~l~~ 226 (438)
T 3dje_A 160 ARNALVAAAREAQRMGVKFVTGTPQGRVVTLIFEN-NDVKGAVTADGKIWRAERTFLCAGASA--GQFLD 226 (438)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEET-TEEEEEEETTTEEEECSEEEECCGGGG--GGTSC
T ss_pred HHHHHHHHHHHHHhcCCEEEeCCcCceEEEEEecC-CeEEEEEECCCCEEECCEEEECCCCCh--hhhcC
Confidence 56889999999999999999999 999999987 8888888 7888899999999999996 46654
No 39
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=98.83 E-value=3.4e-08 Score=105.98 Aligned_cols=67 Identities=13% Similarity=0.208 Sum_probs=54.7
Q ss_pred ecCCC---HHHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-eCCeEEEcCEEEEcCChHHHHHhhCC
Q psy893 224 YPEGG---MGAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-TNGLEIKAKYVLSNTTAKCTLLDLIP 294 (523)
Q Consensus 224 ~~~gG---~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~~g~~~~ad~vI~a~~~~~~~~~ll~ 294 (523)
++.+| ...++..|.+.+++.|++|+++++|++|..++ +++ .|+ .+|+++.||.||+|++.+. ..+..
T Consensus 408 ~p~~g~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~-~~v-~V~t~~G~~i~Ad~VVlAtG~~s--~~l~~ 478 (676)
T 3ps9_A 408 YPQGGWLCPAELTRNVLELAQQQGLQIYYQYQLQNFSRKD-DCW-LLNFAGDQQATHSVVVLANGHQI--SRFSQ 478 (676)
T ss_dssp ETTCEEECHHHHHHHHHHHHHHTTCEEEESCCEEEEEEET-TEE-EEEETTSCEEEESEEEECCGGGG--GCSTT
T ss_pred ecCCeeeCHHHHHHHHHHHHHhCCCEEEeCCeeeEEEEeC-CeE-EEEECCCCEEECCEEEECCCcch--hcccc
Confidence 44444 36899999999999999999999999999987 654 577 6777899999999999985 34543
No 40
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=98.82 E-value=3.9e-08 Score=105.62 Aligned_cols=62 Identities=18% Similarity=0.217 Sum_probs=51.9
Q ss_pred ecCCC---HHHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-eCCe-EEEcCEEEEcCChHH
Q psy893 224 YPEGG---MGAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-TNGL-EIKAKYVLSNTTAKC 287 (523)
Q Consensus 224 ~~~gG---~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~~g~-~~~ad~vI~a~~~~~ 287 (523)
++.+| ...+++.|.+.+++.|++|+++++|++|..++ +++ .|+ .+|+ ++.||.||+|++.+.
T Consensus 403 ~p~~g~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~-~~v-~V~t~~G~~~i~Ad~VVlAtG~~s 469 (689)
T 3pvc_A 403 YPAGGWLCPSDLTHALMMLAQQNGMTCHYQHELQRLKRID-SQW-QLTFGQSQAAKHHATVILATGHRL 469 (689)
T ss_dssp ETTCEEECHHHHHHHHHHHHHHTTCEEEESCCEEEEEECS-SSE-EEEEC-CCCCEEESEEEECCGGGT
T ss_pred ecCCeEECHHHHHHHHHHHHHhCCCEEEeCCeEeEEEEeC-CeE-EEEeCCCcEEEECCEEEECCCcch
Confidence 55555 36899999999999999999999999999987 664 576 6776 799999999999985
No 41
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.81 E-value=5.7e-08 Score=96.71 Aligned_cols=57 Identities=26% Similarity=0.307 Sum_probs=50.4
Q ss_pred HHHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-eCCeEEEcCEEEEcCChHH
Q psy893 229 MGAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-TNGLEIKAKYVLSNTTAKC 287 (523)
Q Consensus 229 ~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~~g~~~~ad~vI~a~~~~~ 287 (523)
...+.+.|.+.+++.|++|+.+++|++|..++ +++++|+ .+| +++||.||+|++.+.
T Consensus 148 ~~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~~-~~v~gv~~~~g-~i~a~~VV~A~G~~s 205 (382)
T 1y56_B 148 PFEATTAFAVKAKEYGAKLLEYTEVKGFLIEN-NEIKGVKTNKG-IIKTGIVVNATNAWA 205 (382)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEESS-SBEEEEEETTE-EEECSEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHCCCEEECCceEEEEEEEC-CEEEEEEECCc-EEECCEEEECcchhH
Confidence 46889999999999999999999999999987 7777787 555 899999999999885
No 42
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=98.78 E-value=4e-08 Score=98.65 Aligned_cols=57 Identities=28% Similarity=0.345 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-eCCeEEEcCEEEEcCChHH
Q psy893 229 MGAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-TNGLEIKAKYVLSNTTAKC 287 (523)
Q Consensus 229 ~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~~g~~~~ad~vI~a~~~~~ 287 (523)
...+.+.|.+.+++.|++|+++++|++|..++ +++++|+ .+| ++.||.||+|++.+.
T Consensus 173 ~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~-~~~~~v~~~~g-~~~a~~vV~a~G~~s 230 (405)
T 2gag_B 173 HDHVAWAFARKANEMGVDIIQNCEVTGFIKDG-EKVTGVKTTRG-TIHAGKVALAGAGHS 230 (405)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEESS-SBEEEEEETTC-CEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCeEEEEEEeC-CEEEEEEeCCc-eEECCEEEECCchhH
Confidence 34789999999999999999999999999987 7777787 566 799999999999875
No 43
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=98.78 E-value=1.6e-07 Score=97.09 Aligned_cols=61 Identities=23% Similarity=0.294 Sum_probs=50.6
Q ss_pred CCHHHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE--eCCe--EEEcC-EEEEcCChHH
Q psy893 227 GGMGAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV--TNGL--EIKAK-YVLSNTTAKC 287 (523)
Q Consensus 227 gG~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~--~~g~--~~~ad-~vI~a~~~~~ 287 (523)
+|...+.+.|.+.+++.|++|+++++|++|..++++++++|+ .+|+ ++.|| .||+|++...
T Consensus 199 ~g~~~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~~ 264 (510)
T 4at0_A 199 GGGYMLMKPLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQYGKEVAVRARRGVVLATGSFA 264 (510)
T ss_dssp CTTHHHHHHHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEETTEEEEEEEEEEEEECCCCCT
T ss_pred CCHHHHHHHHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEECCcEEEEEeCCeEEEeCCChh
Confidence 344489999999999999999999999999998338999988 4554 58996 8999988764
No 44
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=98.76 E-value=8.8e-08 Score=94.92 Aligned_cols=61 Identities=21% Similarity=0.260 Sum_probs=50.8
Q ss_pred HHHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-eCCeEEEcCEEEEcCChHHHHHhhCC
Q psy893 229 MGAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-TNGLEIKAKYVLSNTTAKCTLLDLIP 294 (523)
Q Consensus 229 ~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~~g~~~~ad~vI~a~~~~~~~~~ll~ 294 (523)
...+++.|.+.+++.|++|+.+++|++|..++ +++ .|+ .+| +++||.||+|++++. ..|++
T Consensus 148 ~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~-~~~-~v~~~~g-~~~a~~vV~a~G~~s--~~l~~ 209 (372)
T 2uzz_A 148 SELAIKTWIQLAKEAGCAQLFNCPVTAIRHDD-DGV-TIETADG-EYQAKKAIVCAGTWV--KDLLP 209 (372)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEECS-SSE-EEEESSC-EEEEEEEEECCGGGG--GGTST
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCEEEEEEEcC-CEE-EEEECCC-eEEcCEEEEcCCccH--Hhhcc
Confidence 35788999999999999999999999999876 554 466 556 599999999999986 46654
No 45
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=98.73 E-value=2.3e-08 Score=104.47 Aligned_cols=58 Identities=22% Similarity=0.252 Sum_probs=50.7
Q ss_pred HHHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-eC---C--eEEEcCEEEEcCChHH
Q psy893 229 MGAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-TN---G--LEIKAKYVLSNTTAKC 287 (523)
Q Consensus 229 ~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~~---g--~~~~ad~vI~a~~~~~ 287 (523)
...++..|++.++++|++|+.+++|++|..++ +++++|+ .+ | .+++||.||+|++++.
T Consensus 169 ~~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~~-g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s 232 (561)
T 3da1_A 169 DARLTLEIMKEAVARGAVALNYMKVESFIYDQ-GKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWV 232 (561)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESEEEEEEEEET-TEEEEEEEEETTTCCEEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcC-CeEEEEEEEEcCCCceEEEECCEEEECCCcch
Confidence 46889999999999999999999999999987 8888887 43 4 4789999999999986
No 46
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=98.70 E-value=2.9e-07 Score=96.54 Aligned_cols=59 Identities=20% Similarity=0.214 Sum_probs=49.8
Q ss_pred HHHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-e--CCe--EEEcCEEEEcCChHH
Q psy893 229 MGAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-T--NGL--EIKAKYVLSNTTAKC 287 (523)
Q Consensus 229 ~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~--~g~--~~~ad~vI~a~~~~~ 287 (523)
...+.+.|.+.+++.|++|+++++|++|..++++++++|+ . +|+ ++.||.||+|++...
T Consensus 249 ~~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s 312 (566)
T 1qo8_A 249 GPEIIDTLRKAAKEQGIDTRLNSRVVKLVVNDDHSVVGAVVHGKHTGYYMIGAKSVVLATGGYG 312 (566)
T ss_dssp HHHHHHHHHHHHHHTTCCEECSEEEEEEEECTTSBEEEEEEEETTTEEEEEEEEEEEECCCCCT
T ss_pred HHHHHHHHHHHHHhcCCEEEeCCEEEEEEECCCCcEEEEEEEeCCCcEEEEEcCEEEEecCCcc
Confidence 4578899999999999999999999999987536787887 4 676 689999999998764
No 47
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=98.70 E-value=2.8e-07 Score=101.19 Aligned_cols=57 Identities=28% Similarity=0.291 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-eCCeEEEcCEEEEcCChHH
Q psy893 229 MGAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-TNGLEIKAKYVLSNTTAKC 287 (523)
Q Consensus 229 ~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~~g~~~~ad~vI~a~~~~~ 287 (523)
...+...|.+.++++|++|+.+++|++|..++ +++++|+ .+| +++||+||+|++.+.
T Consensus 150 p~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~~-~~v~~V~t~~G-~i~Ad~VV~AaG~~s 207 (830)
T 1pj5_A 150 AARAVQLLIKRTESAGVTYRGSTTVTGIEQSG-GRVTGVQTADG-VIPADIVVSCAGFWG 207 (830)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEEET-TEEEEEEETTE-EEECSEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHcCCEEECCceEEEEEEeC-CEEEEEEECCc-EEECCEEEECCccch
Confidence 45889999999999999999999999999877 7777777 445 899999999999986
No 48
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=98.68 E-value=2.9e-07 Score=91.77 Aligned_cols=56 Identities=18% Similarity=0.187 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEEeCCeEEEcCEEEEcCChHH
Q psy893 230 GAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVVTNGLEIKAKYVLSNTTAKC 287 (523)
Q Consensus 230 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~~~g~~~~ad~vI~a~~~~~ 287 (523)
..+.+.|.+.+++.|++|+.+++|++|..++ +++ .|+.++.+++||.||+|++.+.
T Consensus 150 ~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~-~~~-~v~~~~g~~~a~~vV~A~G~~~ 205 (389)
T 2gf3_A 150 ENCIRAYRELAEARGAKVLTHTRVEDFDISP-DSV-KIETANGSYTADKLIVSMGAWN 205 (389)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEECS-SCE-EEEETTEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHCCCEEEcCcEEEEEEecC-CeE-EEEeCCCEEEeCEEEEecCccH
Confidence 5888999999999999999999999999876 554 4664444799999999999986
No 49
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=98.65 E-value=8.8e-07 Score=92.98 Aligned_cols=57 Identities=21% Similarity=0.136 Sum_probs=49.1
Q ss_pred HHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-e--CCe--EEEcCEEEEcCChH
Q psy893 230 GAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-T--NGL--EIKAKYVLSNTTAK 286 (523)
Q Consensus 230 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~--~g~--~~~ad~vI~a~~~~ 286 (523)
..+.+.|.+.+++.|++|+++++|++|..++++++++|+ . +|+ ++.||.||+|++..
T Consensus 255 ~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~ 316 (571)
T 1y0p_A 255 AHVVQVLYDNAVKRNIDLRMNTRGIEVLKDDKGTVKGILVKGMYKGYYWVKADAVILATGGF 316 (571)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEECTTSCEEEEEEEETTTEEEEEECSEEEECCCCC
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEeeEeEEcCCCeEEEEEEEeCCCcEEEEECCeEEEeCCCc
Confidence 578899999999999999999999999986537788887 4 676 68999999999875
No 50
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=98.65 E-value=2.3e-07 Score=93.07 Aligned_cols=61 Identities=15% Similarity=0.238 Sum_probs=51.4
Q ss_pred ecCCCHHHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-eCCeEEEcCEEEEcCChHH
Q psy893 224 YPEGGMGAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-TNGLEIKAKYVLSNTTAKC 287 (523)
Q Consensus 224 ~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~~g~~~~ad~vI~a~~~~~ 287 (523)
++......+.+.|.+.+++.|++|+++++|++|..++ +. +.|+ .+| +++||.||+|++.+.
T Consensus 126 ~~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~-~~-~~V~~~~g-~i~ad~VIlAtG~~S 187 (417)
T 3v76_A 126 FCDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTA-SG-FRVTTSAG-TVDAASLVVASGGKS 187 (417)
T ss_dssp EESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEET-TE-EEEEETTE-EEEESEEEECCCCSS
T ss_pred eeCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeC-CE-EEEEECCc-EEEeeEEEECCCCcc
Confidence 5666677899999999999999999999999999876 54 4566 555 899999999999764
No 51
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.63 E-value=1.5e-07 Score=93.61 Aligned_cols=55 Identities=20% Similarity=0.258 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-eCCeEEEcCEEEEcCChHH
Q psy893 230 GAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-TNGLEIKAKYVLSNTTAKC 287 (523)
Q Consensus 230 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~~g~~~~ad~vI~a~~~~~ 287 (523)
..+.+.|.+.+++.|++|+++++|++|..++ +++ .|+ .+| ++.||.||+|++.+.
T Consensus 164 ~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~-~~~-~v~~~~g-~~~a~~vV~A~G~~s 219 (382)
T 1ryi_A 164 YFVCKAYVKAAKMLGAEIFEHTPVLHVERDG-EAL-FIKTPSG-DVWANHVVVASGVWS 219 (382)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCCCEEECSS-SSE-EEEETTE-EEEEEEEEECCGGGT
T ss_pred HHHHHHHHHHHHHCCCEEEcCCcEEEEEEEC-CEE-EEEcCCc-eEEcCEEEECCChhH
Confidence 6789999999999999999999999999877 666 676 455 899999999999875
No 52
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=98.60 E-value=2.5e-07 Score=94.04 Aligned_cols=59 Identities=19% Similarity=0.260 Sum_probs=51.5
Q ss_pred CHHHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-eCCeEEEcCEEEEcCChHH
Q psy893 228 GMGAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-TNGLEIKAKYVLSNTTAKC 287 (523)
Q Consensus 228 G~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~~g~~~~ad~vI~a~~~~~ 287 (523)
....+.+.|.+.+++.|++|+++++|++|..++ +++++|+ .+|++++||.||+|++...
T Consensus 132 ~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~-~~v~~V~~~~G~~i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 132 KAQSVVDALLTRLKDLGVKIRTNTPVETIEYEN-GQTKAVILQTGEVLETNHVVIAVGGKS 191 (447)
T ss_dssp CHHHHHHHHHHHHHHTTCEEECSCCEEEEEEET-TEEEEEEETTCCEEECSCEEECCCCSS
T ss_pred CHHHHHHHHHHHHHHCCCEEEeCcEEEEEEecC-CcEEEEEECCCCEEECCEEEECCCCCc
Confidence 356889999999999999999999999999876 7777888 7777799999999998765
No 53
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.60 E-value=2.4e-08 Score=94.37 Aligned_cols=47 Identities=21% Similarity=0.297 Sum_probs=41.2
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCCCCcceeeecccCCceeccch
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHVLGGAAVTEEIIPGFQFSRAS 48 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~s~~~~~G~~~d~g~ 48 (523)
|||++||+||+.|+++|++|+||||++.+||++.+.. .++..+|.|.
T Consensus 9 GaGpaGL~aA~~La~~G~~V~v~Ek~~~~GG~~~~~~-~~~~~~d~g~ 55 (336)
T 3kkj_A 9 GTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKR-SDAGALDMGA 55 (336)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEE-ETTEEEECSC
T ss_pred CcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccccc-cCCceeecCc
Confidence 8999999999999999999999999999999998765 4566666553
No 54
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.57 E-value=1.5e-06 Score=91.18 Aligned_cols=59 Identities=24% Similarity=0.209 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-e--CCe--EEEcCEEEEcCChHH
Q psy893 229 MGAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-T--NGL--EIKAKYVLSNTTAKC 287 (523)
Q Consensus 229 ~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~--~g~--~~~ad~vI~a~~~~~ 287 (523)
...+.+.|.+.+++.|++|+++++|++|..++++++++|+ . +|+ ++.||.||+|++...
T Consensus 254 g~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~~~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~~ 317 (572)
T 1d4d_A 254 GAHVAQVLWDNAVKRGTDIRLNSRVVRILEDASGKVTGVLVKGEYTGYYVIKADAVVIAAGGFA 317 (572)
T ss_dssp HHHHHHHHHHHHHHTTCEEESSEEEEEEEEC--CCEEEEEEEETTTEEEEEECSEEEECCCCCT
T ss_pred HHHHHHHHHHHHHHcCCeEEecCEEEEEEECCCCeEEEEEEEeCCCcEEEEEcCEEEEeCCCCc
Confidence 3578899999999999999999999999876436788887 4 675 689999999998643
No 55
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=98.57 E-value=4.4e-07 Score=90.78 Aligned_cols=57 Identities=30% Similarity=0.251 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEEeCCeEEEcCEEEEcCChHH
Q psy893 229 MGAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVVTNGLEIKAKYVLSNTTAKC 287 (523)
Q Consensus 229 ~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~~~g~~~~ad~vI~a~~~~~ 287 (523)
...+...|.+.+++.|++|+++++|++|..++ +++ .|+.++.+++||.||+|++.+.
T Consensus 152 ~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~-~~v-~v~t~~g~i~a~~VV~A~G~~s 208 (397)
T 2oln_A 152 VRGTLAALFTLAQAAGATLRAGETVTELVPDA-DGV-SVTTDRGTYRAGKVVLACGPYT 208 (397)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESCCEEEEEEET-TEE-EEEESSCEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHcCCEEECCCEEEEEEEcC-CeE-EEEECCCEEEcCEEEEcCCcCh
Confidence 35788899999999999999999999999876 554 3553334799999999999874
No 56
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=98.56 E-value=1.7e-07 Score=93.74 Aligned_cols=63 Identities=14% Similarity=0.243 Sum_probs=51.0
Q ss_pred HHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-e---CCeEEEcCEEEEcCChHHHHHhhC
Q psy893 230 GAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-T---NGLEIKAKYVLSNTTAKCTLLDLI 293 (523)
Q Consensus 230 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~---~g~~~~ad~vI~a~~~~~~~~~ll 293 (523)
..+.+.|.+.+++.|++|+.+++|++|..++ +++++|+ . ++.+++||.||.|.+.+..+.+.+
T Consensus 102 ~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~-~~v~gv~~~~~~~~~~~~a~~vV~A~G~~s~~~~~~ 168 (397)
T 3cgv_A 102 DKFDKHLAALAAKAGADVWVKSPALGVIKEN-GKVAGAKIRHNNEIVDVRAKMVIAADGFESEFGRWA 168 (397)
T ss_dssp HHHHHHHHHHHHHHTCEEESSCCEEEEEEET-TEEEEEEEEETTEEEEEEEEEEEECCCTTCHHHHHH
T ss_pred HHHHHHHHHHHHhCCCEEEECCEEEEEEEeC-CEEEEEEEEECCeEEEEEcCEEEECCCcchHhHHhc
Confidence 3677888888888999999999999999887 7777676 2 345899999999999876555554
No 57
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=98.55 E-value=3.9e-07 Score=95.41 Aligned_cols=58 Identities=21% Similarity=0.224 Sum_probs=49.8
Q ss_pred HHHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-e---CCe--EEEcCEEEEcCChHH
Q psy893 229 MGAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-T---NGL--EIKAKYVLSNTTAKC 287 (523)
Q Consensus 229 ~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~---~g~--~~~ad~vI~a~~~~~ 287 (523)
...++..+++.+.+.|++|+.+++|++|..++ +++++|+ . +|+ +++||.||+|++++.
T Consensus 187 ~~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~~-~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws 250 (571)
T 2rgh_A 187 DARLVIDNIKKAAEDGAYLVSKMKAVGFLYEG-DQIVGVKARDLLTDEVIEIKAKLVINTSGPWV 250 (571)
T ss_dssp HHHHHHHHHHHHHHTTCEEESSEEEEEEEEET-TEEEEEEEEETTTCCEEEEEBSCEEECCGGGH
T ss_pred hHHHHHHHHHHHHHcCCeEEeccEEEEEEEeC-CEEEEEEEEEcCCCCEEEEEcCEEEECCChhH
Confidence 35788889999999999999999999999987 7777777 3 454 689999999999996
No 58
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.46 E-value=5.3e-07 Score=93.17 Aligned_cols=57 Identities=19% Similarity=0.315 Sum_probs=51.4
Q ss_pred HHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-eCCeEEEcCEEEEcCChHH
Q psy893 230 GAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-TNGLEIKAKYVLSNTTAKC 287 (523)
Q Consensus 230 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~~g~~~~ad~vI~a~~~~~ 287 (523)
..+.+.|.+.+++.|++|+++++|++|..++ +++++|+ .+|+++.||.||+|++...
T Consensus 220 ~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~-~~v~gV~l~~G~~i~Ad~VVlA~G~~s 277 (549)
T 3nlc_A 220 VTMIEKMRATIIELGGEIRFSTRVDDLHMED-GQITGVTLSNGEEIKSRHVVLAVGHSA 277 (549)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCEEEEEESS-SBEEEEEETTSCEEECSCEEECCCTTC
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEEeC-CEEEEEEECCCCEEECCEEEECCCCCh
Confidence 5788899999999999999999999999987 7888888 7888899999999999875
No 59
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=98.42 E-value=1.4e-06 Score=88.58 Aligned_cols=57 Identities=19% Similarity=0.261 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHHHHCCcEEEeCceeeEEEE---------------CCCCCeEEEE-eCCeEE--EcCEEEEcCChHH
Q psy893 229 MGAVSQALARSAQASGAQLFTSQTVTEITL---------------DSDKRASGVV-TNGLEI--KAKYVLSNTTAKC 287 (523)
Q Consensus 229 ~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~---------------~~~~~~~~v~-~~g~~~--~ad~vI~a~~~~~ 287 (523)
...+.+.|.+.+++.|++|+.+++|++|.. ++ +++++|+ .+| ++ .||.||+|++++.
T Consensus 180 ~~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~-~~v~~V~t~~g-~i~~~Ad~VV~AtG~~s 254 (448)
T 3axb_A 180 AEKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQE-ARASAAVLSDG-TRVEVGEKLVVAAGVWS 254 (448)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSC-EEEEEEEETTS-CEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCC-CceEEEEeCCC-EEeecCCEEEECCCcCH
Confidence 458999999999999999999999999998 55 6666777 566 68 9999999999986
No 60
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=98.41 E-value=4e-06 Score=83.72 Aligned_cols=62 Identities=15% Similarity=0.213 Sum_probs=48.7
Q ss_pred ecCCCHHHHHHHHHHHHHHCCcEEEeCceeeEEEEC----CCCCeEEEEeCCeEEEcCEEEEcCChHH
Q psy893 224 YPEGGMGAVSQALARSAQASGAQLFTSQTVTEITLD----SDKRASGVVTNGLEIKAKYVLSNTTAKC 287 (523)
Q Consensus 224 ~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~----~~~~~~~v~~~g~~~~ad~vI~a~~~~~ 287 (523)
++......+.+.|.+.+++.|++|+++++|++|..+ + ++ +.|+.++.+++||.||+|++...
T Consensus 103 ~p~~~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~-~~-~~v~~~~g~i~ad~VVlAtG~~s 168 (401)
T 2gqf_A 103 FCDEGAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEK-VR-FVLQVNSTQWQCKNLIVATGGLS 168 (401)
T ss_dssp EETTCTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSS-CC-EEEEETTEEEEESEEEECCCCSS
T ss_pred ccCCCHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCC-Ce-EEEEECCCEEECCEEEECCCCcc
Confidence 443345678899999999999999999999999976 4 44 34663333899999999998765
No 61
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=98.23 E-value=3.3e-05 Score=80.98 Aligned_cols=57 Identities=14% Similarity=0.154 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHHHCCcEEEeCceeeEEEEC-CCCCeEEEE-e---CCe--EEEcCEEEEcCChHH
Q psy893 230 GAVSQALARSAQASGAQLFTSQTVTEITLD-SDKRASGVV-T---NGL--EIKAKYVLSNTTAKC 287 (523)
Q Consensus 230 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~-~~~~~~~v~-~---~g~--~~~ad~vI~a~~~~~ 287 (523)
..+.+.|.+.+++.|++|+++++|++|..+ + +++++|. . +|+ ++.|+.||+|++...
T Consensus 143 ~~l~~~L~~~~~~~gv~i~~~~~v~~L~~~~~-g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~~ 206 (588)
T 2wdq_A 143 HALLHTLYQQNLKNHTTIFSEWYALDLVKNQD-GAVVGCTALCIETGEVVYFKARATVLATGGAG 206 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEEETEEEEEEEECTT-SCEEEEEEEETTTCCEEEEEEEEEEECCCCCG
T ss_pred HHHHHHHHHHHHhCCCEEEeCcEEEEEEECCC-CEEEEEEEEEcCCCeEEEEEcCEEEECCCCCc
Confidence 578899999999999999999999999986 5 7888877 3 454 588999999998765
No 62
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.23 E-value=2.8e-06 Score=84.96 Aligned_cols=64 Identities=8% Similarity=0.168 Sum_probs=53.4
Q ss_pred HHHHHHHHHHHHHC-CcEEEeCceeeEEEECCCCCeE-EEE-eCCeEEEcCEEEEcCChHHHHHhhCC
Q psy893 230 GAVSQALARSAQAS-GAQLFTSQTVTEITLDSDKRAS-GVV-TNGLEIKAKYVLSNTTAKCTLLDLIP 294 (523)
Q Consensus 230 ~~l~~~l~~~~~~~-G~~i~~~~~V~~I~~~~~~~~~-~v~-~~g~~~~ad~vI~a~~~~~~~~~ll~ 294 (523)
..+.+.|.+.+++. |++|+++++|++|..++ ++++ .|+ .+|++++||.||.|.+.+...++.+.
T Consensus 107 ~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~-~~v~g~v~~~~g~~~~ad~vV~AdG~~s~vr~~lg 173 (399)
T 2x3n_A 107 ESLRRLVLEKIDGEATVEMLFETRIEAVQRDE-RHAIDQVRLNDGRVLRPRVVVGADGIASYVRRRLL 173 (399)
T ss_dssp HHHHHHHHHHHTTCTTEEEECSCCEEEEEECT-TSCEEEEEETTSCEEEEEEEEECCCTTCHHHHHTS
T ss_pred HHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcC-CceEEEEEECCCCEEECCEEEECCCCChHHHHHhC
Confidence 47788889999888 89999999999999887 6653 566 77888999999999998876666664
No 63
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=98.21 E-value=2.5e-05 Score=80.41 Aligned_cols=57 Identities=16% Similarity=0.083 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-e---CCe--EEEcCEEEEcCChHH
Q psy893 229 MGAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-T---NGL--EIKAKYVLSNTTAKC 287 (523)
Q Consensus 229 ~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~---~g~--~~~ad~vI~a~~~~~ 287 (523)
...++..|.+.+.++|++|+.+++|++|..++ ++++|+ . +|+ +++||.||+|++++.
T Consensus 148 ~~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~--~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s 210 (501)
T 2qcu_A 148 DARLVLANAQMVVRKGGEVLTRTRATSARREN--GLWIVEAEDIDTGKKYSWQARGLVNATGPWV 210 (501)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSEEEEEEEEET--TEEEEEEEETTTCCEEEEEESCEEECCGGGH
T ss_pred HHHHHHHHHHHHHHcCCEEEcCcEEEEEEEeC--CEEEEEEEECCCCCEEEEECCEEEECCChhH
Confidence 46899999999999999999999999999864 456676 3 565 789999999999986
No 64
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.18 E-value=1.2e-05 Score=81.00 Aligned_cols=65 Identities=20% Similarity=0.310 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-eCCe--EEEcCEEEEcCChHHHHHhhCC
Q psy893 230 GAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-TNGL--EIKAKYVLSNTTAKCTLLDLIP 294 (523)
Q Consensus 230 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~~g~--~~~ad~vI~a~~~~~~~~~ll~ 294 (523)
..+.+.|.+.+++.|++|+.+++|++|..++++..+.|+ .+|+ +++||.||.|.+.+..+.+++.
T Consensus 106 ~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~~~~~~a~~vV~A~G~~s~l~~~~g 173 (421)
T 3nix_A 106 GNFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIEDINGNKREIEARFIIDASGYGRVIPRMFG 173 (421)
T ss_dssp HHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEETTSCEEEEEEEEEEECCGGGCHHHHHTT
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCCEEEEEcCEEEECCCCchhhHHhcC
Confidence 467788888888889999999999999987623233455 5776 6999999999998866666654
No 65
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=98.15 E-value=2.5e-05 Score=82.79 Aligned_cols=57 Identities=18% Similarity=0.126 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-e---CCe--EEEcCEEEEcCChHH
Q psy893 230 GAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-T---NGL--EIKAKYVLSNTTAKC 287 (523)
Q Consensus 230 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~---~g~--~~~ad~vI~a~~~~~ 287 (523)
..+...|.+.+.+.|++|+.++.|.+|..++ +++++|. . +|+ .+.|+.||+|++...
T Consensus 158 ~~l~~~L~~~a~~~gv~i~~~~~v~~L~~~~-g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~ 220 (660)
T 2bs2_A 158 HTMLFAVANECLKLGVSIQDRKEAIALIHQD-GKCYGAVVRDLVTGDIIAYVAKGTLIATGGYG 220 (660)
T ss_dssp HHHHHHHHHHHHHHTCEEECSEEEEEEEEET-TEEEEEEEEETTTCCEEEEECSEEEECCCCCG
T ss_pred HHHHHHHHHHHHhCCCEEEECcEEEEEEecC-CEEEEEEEEECCCCcEEEEEcCEEEEccCcch
Confidence 4788999999999999999999999999877 8888876 3 465 489999999998765
No 66
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.15 E-value=1.8e-05 Score=82.37 Aligned_cols=63 Identities=8% Similarity=0.176 Sum_probs=51.0
Q ss_pred HHHHHHHHHHHHHCCcEEEeCceeeEEEECCCC----CeEEEE-eCC---eEEEcCEEEEcCChHHHHHhhCC
Q psy893 230 GAVSQALARSAQASGAQLFTSQTVTEITLDSDK----RASGVV-TNG---LEIKAKYVLSNTTAKCTLLDLIP 294 (523)
Q Consensus 230 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~----~~~~v~-~~g---~~~~ad~vI~a~~~~~~~~~ll~ 294 (523)
..+...|.+.+++.|++|+++++|++|..++ + .++ |+ .++ .+++||.||.|.+.+..+++.+.
T Consensus 120 ~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~-~~~~~~v~-v~~~~~~~~~~i~a~~vV~AdG~~S~vR~~lg 190 (535)
T 3ihg_A 120 DKLEPILLAQARKHGGAIRFGTRLLSFRQHD-DDAGAGVT-ARLAGPDGEYDLRAGYLVGADGNRSLVRESLG 190 (535)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCEEEEEEEEC-GGGCSEEE-EEEEETTEEEEEEEEEEEECCCTTCHHHHHTT
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEECC-CCccccEE-EEEEcCCCeEEEEeCEEEECCCCcchHHHHcC
Confidence 4677888999999999999999999999887 4 443 44 554 68999999999999876677664
No 67
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.14 E-value=3e-06 Score=87.71 Aligned_cols=63 Identities=17% Similarity=0.401 Sum_probs=51.6
Q ss_pred HHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE---eCCe--EEEcCEEEEcCChHHHHHhhC
Q psy893 230 GAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV---TNGL--EIKAKYVLSNTTAKCTLLDLI 293 (523)
Q Consensus 230 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~---~~g~--~~~ad~vI~a~~~~~~~~~ll 293 (523)
..+.+.|.+.+++.|++|+++++|++|..++ +++++|+ .+|+ +++||.||.|.+.+..+.+.+
T Consensus 111 ~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~-~~v~gv~~~~~dG~~~~i~ad~VI~AdG~~S~vr~~l 178 (512)
T 3e1t_A 111 ARFDDMLLRNSERKGVDVRERHEVIDVLFEG-ERAVGVRYRNTEGVELMAHARFIVDASGNRTRVSQAV 178 (512)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCEEEEEEEET-TEEEEEEEECSSSCEEEEEEEEEEECCCTTCSSGGGT
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEEEC-CEEEEEEEEeCCCCEEEEEcCEEEECCCcchHHHHHc
Confidence 3678888999989999999999999999987 7776666 3564 789999999999876545554
No 68
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.14 E-value=4.4e-06 Score=85.04 Aligned_cols=64 Identities=17% Similarity=0.235 Sum_probs=52.4
Q ss_pred HHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-e---CCe--EEEcCEEEEcCChHHHHHhhCC
Q psy893 230 GAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-T---NGL--EIKAKYVLSNTTAKCTLLDLIP 294 (523)
Q Consensus 230 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~---~g~--~~~ad~vI~a~~~~~~~~~ll~ 294 (523)
..+.+.|.+.+.+.|++|+++++|++|..++ +++++|+ . +|+ +++||.||.|.+.+....+.+.
T Consensus 100 ~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~-~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s~vr~~l~ 169 (453)
T 3atr_A 100 PLYNQRVLKEAQDRGVEIWDLTTAMKPIFED-GYVKGAVLFNRRTNEELTVYSKVVVEATGYSRSFRSKLP 169 (453)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEEET-TEEEEEEEEETTTTEEEEEECSEEEECCGGGCTTGGGSC
T ss_pred HHHHHHHHHHHHHcCCEEEeCcEEEEEEEEC-CEEEEEEEEEcCCCceEEEEcCEEEECcCCchhhHHhcC
Confidence 3677788888888999999999999999887 7777676 3 776 7899999999998865555554
No 69
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=98.11 E-value=5.7e-05 Score=79.42 Aligned_cols=57 Identities=14% Similarity=0.219 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-e---CCe--EEEcCEEEEcCChHH
Q psy893 230 GAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-T---NGL--EIKAKYVLSNTTAKC 287 (523)
Q Consensus 230 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~---~g~--~~~ad~vI~a~~~~~ 287 (523)
..+...|.+.+.+.|++|+.++.|.+|..++ +++++|. . +|+ .+.|+.||+|++...
T Consensus 155 ~~l~~~L~~~~~~~gv~i~~~~~v~~Li~~~-g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~ 217 (621)
T 2h88_A 155 HSLLHTLYGRSLRYDTSYFVEYFALDLLMEN-GECRGVIALCIEDGTIHRFRAKNTVIATGGYG 217 (621)
T ss_dssp HHHHHHHHHHHTTSCCEEEETEEEEEEEEET-TEEEEEEEEETTTCCEEEEEEEEEEECCCCCG
T ss_pred HHHHHHHHHHHHhCCCEEEEceEEEEEEEEC-CEEEEEEEEEcCCCcEEEEEcCeEEECCCccc
Confidence 4788999999999999999999999999877 8888887 3 564 688999999998765
No 70
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.09 E-value=1.2e-05 Score=79.78 Aligned_cols=60 Identities=15% Similarity=0.192 Sum_probs=49.8
Q ss_pred HHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-eCCeEEEcCEEEEcCChHHHHHhhCC
Q psy893 230 GAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-TNGLEIKAKYVLSNTTAKCTLLDLIP 294 (523)
Q Consensus 230 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~~g~~~~ad~vI~a~~~~~~~~~ll~ 294 (523)
..+.+.|.+.+++.|++|+++++|++|.. + + .|+ .+|++++||.||.|.+.+....+++.
T Consensus 107 ~~l~~~L~~~~~~~gv~i~~~~~v~~i~~-~-~---~v~~~~g~~~~ad~vV~AdG~~s~vr~~l~ 167 (379)
T 3alj_A 107 SHLHDALVNRARALGVDISVNSEAVAADP-V-G---RLTLQTGEVLEADLIVGADGVGSKVRDSIG 167 (379)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCEEEEET-T-T---EEEETTSCEEECSEEEECCCTTCHHHHHHC
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEe-C-C---EEEECCCCEEEcCEEEECCCccHHHHHHhc
Confidence 46788888889889999999999999987 4 5 466 77888999999999998876666654
No 71
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.07 E-value=3.1e-05 Score=81.04 Aligned_cols=64 Identities=13% Similarity=0.258 Sum_probs=52.4
Q ss_pred HHHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-e-CC--eEEEcCEEEEcCChHHHHHhhC
Q psy893 229 MGAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-T-NG--LEIKAKYVLSNTTAKCTLLDLI 293 (523)
Q Consensus 229 ~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~-~g--~~~~ad~vI~a~~~~~~~~~ll 293 (523)
-..+...|.+.+++.|++|+.+++|++|..++ +.+++|+ . +| .+++||.||.|.+.+..+.+.+
T Consensus 127 r~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~-g~~~~V~~~~~G~~~~i~AdlVV~AdG~~S~lr~~l 194 (591)
T 3i3l_A 127 REEFDKLLLDEARSRGITVHEETPVTDVDLSD-PDRVVLTVRRGGESVTVESDFVIDAGGSGGPISRKL 194 (591)
T ss_dssp HHHHHHHHHHHHHHTTCEEETTCCEEEEECCS-TTCEEEEEEETTEEEEEEESEEEECCGGGCHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcC-CCEEEEEEecCCceEEEEcCEEEECCCCcchhHHHc
Confidence 34788889999999999999999999999875 6667777 5 77 5799999999999876554444
No 72
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.06 E-value=4.4e-05 Score=76.63 Aligned_cols=57 Identities=25% Similarity=0.253 Sum_probs=50.8
Q ss_pred HHHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-eCCeEEEcCEEEEcCChH
Q psy893 229 MGAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-TNGLEIKAKYVLSNTTAK 286 (523)
Q Consensus 229 ~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~~g~~~~ad~vI~a~~~~ 286 (523)
...+.+.+.+.+++.|++|++++.|++|..++ +++.+|+ .+|+++.||.||++++..
T Consensus 193 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~-~~v~~v~l~dG~~i~aD~Vv~a~G~~ 250 (415)
T 3lxd_A 193 GEALSEFYQAEHRAHGVDLRTGAAMDCIEGDG-TKVTGVRMQDGSVIPADIVIVGIGIV 250 (415)
T ss_dssp CHHHHHHHHHHHHHTTCEEEETCCEEEEEESS-SBEEEEEESSSCEEECSEEEECSCCE
T ss_pred CHHHHHHHHHHHHhCCCEEEECCEEEEEEecC-CcEEEEEeCCCCEEEcCEEEECCCCc
Confidence 45788889999999999999999999999877 7887888 889899999999998864
No 73
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=98.04 E-value=4e-05 Score=79.53 Aligned_cols=57 Identities=18% Similarity=0.195 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHH-CCcEEEeCceeeEEEE-CCCC------CeEEEE-e---CCe--EEEcCEEEEcCChHH
Q psy893 230 GAVSQALARSAQA-SGAQLFTSQTVTEITL-DSDK------RASGVV-T---NGL--EIKAKYVLSNTTAKC 287 (523)
Q Consensus 230 ~~l~~~l~~~~~~-~G~~i~~~~~V~~I~~-~~~~------~~~~v~-~---~g~--~~~ad~vI~a~~~~~ 287 (523)
..+.+.|.+.+++ .|++|++++.|++|.. ++ + ++++|. . +|+ ++.|+.||+|++...
T Consensus 138 ~~l~~~L~~~~~~~~gv~i~~~~~v~~L~~~~~-g~~~~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 208 (540)
T 1chu_A 138 REVETTLVSKALNHPNIRVLERTNAVDLIVSDK-IGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGGAS 208 (540)
T ss_dssp ----CCCHHHHHHCTTEEEECSEEEEEEEEGGG-TTCCSSCBEEEEEEEETTTTEEEEEECSEEEECCCCCG
T ss_pred HHHHHHHHHHHHcCCCCEEEeCcEEEEEEEcCC-CCcccCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCcc
Confidence 3677788888888 6999999999999998 44 5 788887 4 575 689999999998765
No 74
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=98.04 E-value=4.4e-06 Score=83.75 Aligned_cols=60 Identities=12% Similarity=0.136 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-eCCeEEEcCEEEEcCChHHHHHhhC
Q psy893 230 GAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-TNGLEIKAKYVLSNTTAKCTLLDLI 293 (523)
Q Consensus 230 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~~g~~~~ad~vI~a~~~~~~~~~ll 293 (523)
..+.+.|.+.+++ ++|+++++|++|..++ +++ .|+ .+|++++||.||.|.+.+...++.+
T Consensus 127 ~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~-~~v-~v~~~~g~~~~a~~vV~AdG~~S~vr~~l 187 (407)
T 3rp8_A 127 AELQREMLDYWGR--DSVQFGKRVTRCEEDA-DGV-TVWFTDGSSASGDLLIAADGSHSALRPWV 187 (407)
T ss_dssp HHHHHHHHHHHCG--GGEEESCCEEEEEEET-TEE-EEEETTSCEEEESEEEECCCTTCSSHHHH
T ss_pred HHHHHHHHHhCCc--CEEEECCEEEEEEecC-CcE-EEEEcCCCEEeeCEEEECCCcChHHHHHh
Confidence 4667777777766 8899999999999887 654 466 7888999999999999875444544
No 75
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=98.03 E-value=2.3e-05 Score=82.14 Aligned_cols=62 Identities=23% Similarity=0.415 Sum_probs=50.6
Q ss_pred HHHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-e------CC---------eEEEcCEEEEcCChHHHHH
Q psy893 229 MGAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-T------NG---------LEIKAKYVLSNTTAKCTLL 290 (523)
Q Consensus 229 ~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~------~g---------~~~~ad~vI~a~~~~~~~~ 290 (523)
...+.+.|.+.+++.|++|+++++|++|..++++++++|+ . +| .+++||.||.|.+.+..+.
T Consensus 143 r~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S~vr 220 (584)
T 2gmh_A 143 LGHLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHGHLA 220 (584)
T ss_dssp HHHHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTTCHHH
T ss_pred HHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCCchHH
Confidence 3478889999999999999999999999987646777777 4 33 5799999999999875433
No 76
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=98.03 E-value=3.9e-05 Score=78.88 Aligned_cols=63 Identities=19% Similarity=0.253 Sum_probs=51.6
Q ss_pred HHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-eCCe---EEEcCEEEEcCChHHHHHhhCC
Q psy893 230 GAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-TNGL---EIKAKYVLSNTTAKCTLLDLIP 294 (523)
Q Consensus 230 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~~g~---~~~ad~vI~a~~~~~~~~~ll~ 294 (523)
..+.+.|.+.+++.|++|+++++|++|..++ ++++ |+ .+++ +++||.||.|.+.+...++++.
T Consensus 107 ~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~-~~v~-v~~~~~~g~~~~~a~~vVgADG~~S~VR~~lg 173 (499)
T 2qa2_A 107 STTESVLEEWALGRGAELLRGHTVRALTDEG-DHVV-VEVEGPDGPRSLTTRYVVGCDGGRSTVRKAAG 173 (499)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCEEEEEEECS-SCEE-EEEECSSCEEEEEEEEEEECCCTTCHHHHHTT
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEEeC-CEEE-EEEEcCCCcEEEEeCEEEEccCcccHHHHHcC
Confidence 3677888888888999999999999999887 6654 55 5553 7899999999999877777764
No 77
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.03 E-value=4.2e-06 Score=83.78 Aligned_cols=57 Identities=19% Similarity=0.320 Sum_probs=50.8
Q ss_pred HHHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-eCCeEEEcCEEEEcCChH
Q psy893 229 MGAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-TNGLEIKAKYVLSNTTAK 286 (523)
Q Consensus 229 ~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~~g~~~~ad~vI~a~~~~ 286 (523)
...+.+.+.+.+++.|++++++++|++|..++ +++.+|+ .+|+++.||.||++++..
T Consensus 183 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~-~~v~~V~~~dG~~i~aD~Vv~a~G~~ 240 (404)
T 3fg2_P 183 TPEISSYFHDRHSGAGIRMHYGVRATEIAAEG-DRVTGVVLSDGNTLPCDLVVVGVGVI 240 (404)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEEET-TEEEEEEETTSCEEECSEEEECCCEE
T ss_pred CHHHHHHHHHHHHhCCcEEEECCEEEEEEecC-CcEEEEEeCCCCEEEcCEEEECcCCc
Confidence 45788899999999999999999999999877 7787888 889899999999999864
No 78
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=98.01 E-value=2.4e-05 Score=80.47 Aligned_cols=63 Identities=16% Similarity=0.200 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-eCCe---EEEcCEEEEcCChHHHHHhhCC
Q psy893 230 GAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-TNGL---EIKAKYVLSNTTAKCTLLDLIP 294 (523)
Q Consensus 230 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~~g~---~~~ad~vI~a~~~~~~~~~ll~ 294 (523)
..+.+.|.+.+++.|++|+++++|++|..++ +.++ |+ .+++ +++||.||.|.+.+...++++.
T Consensus 106 ~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~-~~v~-v~~~~~~g~~~~~a~~vVgADG~~S~VR~~lg 172 (500)
T 2qa1_A 106 SVTETHLEQWATGLGADIRRGHEVLSLTDDG-AGVT-VEVRGPEGKHTLRAAYLVGCDGGRSSVRKAAG 172 (500)
T ss_dssp HHHHHHHHHHHHHTTCEEEETCEEEEEEEET-TEEE-EEEEETTEEEEEEESEEEECCCTTCHHHHHTT
T ss_pred HHHHHHHHHHHHHCCCEEECCcEEEEEEEcC-CeEE-EEEEcCCCCEEEEeCEEEECCCcchHHHHHcC
Confidence 3677788888888999999999999999887 5554 55 5553 7899999999999877777764
No 79
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=97.99 E-value=4e-05 Score=79.62 Aligned_cols=56 Identities=18% Similarity=0.178 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHHCCc--EEEeCceeeEEEECCCCCeEEEE-eCCeEEEcCEEEEcCChH
Q psy893 231 AVSQALARSAQASGA--QLFTSQTVTEITLDSDKRASGVV-TNGLEIKAKYVLSNTTAK 286 (523)
Q Consensus 231 ~l~~~l~~~~~~~G~--~i~~~~~V~~I~~~~~~~~~~v~-~~g~~~~ad~vI~a~~~~ 286 (523)
.+.+.+.+.+++.|. +++++++|+++..++++..+.|+ .+|++++||+||+|++..
T Consensus 100 ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i~ad~lV~AtG~~ 158 (549)
T 4ap3_A 100 EILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGDEVSARFLVVAAGPL 158 (549)
T ss_dssp HHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSE
T ss_pred HHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCCCEEEeCEEEECcCCC
Confidence 444555666667776 79999999999987634455677 788889999999999954
No 80
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=97.99 E-value=5.3e-05 Score=77.28 Aligned_cols=56 Identities=20% Similarity=0.291 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE--eCCeEEEcCEEEEcCChHH
Q psy893 230 GAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV--TNGLEIKAKYVLSNTTAKC 287 (523)
Q Consensus 230 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~--~~g~~~~ad~vI~a~~~~~ 287 (523)
..+.+.|.+.+++.|++|+.+++| +|..++ +++.+|. .++.++.||.||+|++...
T Consensus 119 ~~l~~~L~~~~~~~gv~i~~~~~v-~l~~~~-~~v~Gv~v~~~~g~~~a~~VVlAtGg~~ 176 (472)
T 2e5v_A 119 REIFNFLLKLAREEGIPIIEDRLV-EIRVKD-GKVTGFVTEKRGLVEDVDKLVLATGGYS 176 (472)
T ss_dssp HHHHHHHHHHHHHTTCCEECCCEE-EEEEET-TEEEEEEETTTEEECCCSEEEECCCCCG
T ss_pred HHHHHHHHHHHHhCCCEEEECcEE-EEEEeC-CEEEEEEEEeCCCeEEeeeEEECCCCCc
Confidence 478888999888889999999999 998877 7787776 2334678999999999875
No 81
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=97.97 E-value=2.3e-05 Score=78.20 Aligned_cols=60 Identities=13% Similarity=0.217 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-eCCeEEEcCEEEEcCChHHHHHhhCC
Q psy893 231 AVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-TNGLEIKAKYVLSNTTAKCTLLDLIP 294 (523)
Q Consensus 231 ~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~~g~~~~ad~vI~a~~~~~~~~~ll~ 294 (523)
.+.+.|.+.+ .|++|+++++|++|..++ ++++ |+ .+|++++||.||.|.+.+...++++.
T Consensus 100 ~l~~~L~~~~--~~~~i~~~~~v~~i~~~~-~~v~-v~~~~g~~~~ad~vV~AdG~~S~vr~~~~ 160 (397)
T 2vou_A 100 SIYGGLYELF--GPERYHTSKCLVGLSQDS-ETVQ-MRFSDGTKAEANWVIGADGGASVVRKRLL 160 (397)
T ss_dssp HHHHHHHHHH--CSTTEETTCCEEEEEECS-SCEE-EEETTSCEEEESEEEECCCTTCHHHHHHH
T ss_pred HHHHHHHHhC--CCcEEEcCCEEEEEEecC-CEEE-EEECCCCEEECCEEEECCCcchhHHHHhc
Confidence 4445555544 379999999999999887 6554 66 78888999999999998876555543
No 82
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=97.94 E-value=4.2e-05 Score=79.29 Aligned_cols=57 Identities=18% Similarity=0.134 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHHCCc--EEEeCceeeEEEECCCCCeEEEE-eCCeEEEcCEEEEcCChHH
Q psy893 231 AVSQALARSAQASGA--QLFTSQTVTEITLDSDKRASGVV-TNGLEIKAKYVLSNTTAKC 287 (523)
Q Consensus 231 ~l~~~l~~~~~~~G~--~i~~~~~V~~I~~~~~~~~~~v~-~~g~~~~ad~vI~a~~~~~ 287 (523)
.+.+.+.+.+++.|+ +|+++++|++|..++++..+.|+ .+|+++.||.||+|++...
T Consensus 88 ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~~s 147 (540)
T 3gwf_A 88 EILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGLLS 147 (540)
T ss_dssp HHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCSCC
T ss_pred HHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCcccc
Confidence 455556666667776 89999999999987634455677 7888899999999999643
No 83
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=97.93 E-value=3.9e-05 Score=79.65 Aligned_cols=56 Identities=18% Similarity=0.185 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHCCc--EEEeCceeeEEEECCCCCeEEEE-eCCeEEEcCEEEEcCChH
Q psy893 231 AVSQALARSAQASGA--QLFTSQTVTEITLDSDKRASGVV-TNGLEIKAKYVLSNTTAK 286 (523)
Q Consensus 231 ~l~~~l~~~~~~~G~--~i~~~~~V~~I~~~~~~~~~~v~-~~g~~~~ad~vI~a~~~~ 286 (523)
.+.+.+.+.+++.|. +|+++++|+++..+++++.+.|+ .+|++++||.||+|++..
T Consensus 88 ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~lV~AtG~~ 146 (545)
T 3uox_A 88 EMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNEEVVTCRFLISATGPL 146 (545)
T ss_dssp HHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTTEEEEEEEEEECCCSC
T ss_pred HHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCCCEEEeCEEEECcCCC
Confidence 344445555556665 79999999999986534455677 788899999999999954
No 84
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=97.93 E-value=0.00013 Score=76.67 Aligned_cols=57 Identities=23% Similarity=0.262 Sum_probs=48.6
Q ss_pred HHHHHHHHHHHHHCC-cEEEeCceeeEEEECCCCCeEEEE----eCCe--EEEcCEEEEcCChHH
Q psy893 230 GAVSQALARSAQASG-AQLFTSQTVTEITLDSDKRASGVV----TNGL--EIKAKYVLSNTTAKC 287 (523)
Q Consensus 230 ~~l~~~l~~~~~~~G-~~i~~~~~V~~I~~~~~~~~~~v~----~~g~--~~~ad~vI~a~~~~~ 287 (523)
..+...|.+.+.+.| ++|+.++.|++|..++ +++++|. .+|+ ++.|+.||+|++...
T Consensus 134 ~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~~~-g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~s 197 (602)
T 1kf6_A 134 FHMLHTLFQTSLQFPQIQRFDEHFVLDILVDD-GHVRGLVAMNMMEGTLVQIRANAVVMATGGAG 197 (602)
T ss_dssp HHHHHHHHHHHTTCTTEEEEETEEEEEEEEET-TEEEEEEEEETTTTEEEEEECSCEEECCCCCG
T ss_pred HHHHHHHHHHHHhCCCcEEEeCCEEEEEEEeC-CEEEEEEEEEcCCCcEEEEEcCeEEECCCCCc
Confidence 478899999998888 9999999999999887 8877775 2566 689999999999865
No 85
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=97.93 E-value=2.8e-05 Score=77.45 Aligned_cols=64 Identities=17% Similarity=0.201 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE--eCCe--EEEcCEEEEcCChHHHHHhhCC
Q psy893 230 GAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV--TNGL--EIKAKYVLSNTTAKCTLLDLIP 294 (523)
Q Consensus 230 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~--~~g~--~~~ad~vI~a~~~~~~~~~ll~ 294 (523)
..+.+.|.+.+.+.|++|+++++|++|..++++.+ .|+ .+|+ +++||.||.|.+.+...++.+.
T Consensus 103 ~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~-~v~~~~~g~~~~~~a~~vV~AdG~~S~vr~~l~ 170 (394)
T 1k0i_A 103 TEVTRDLMEAREACGATTVYQAAEVRLHDLQGERP-YVTFERDGERLRLDCDYIAGCDGFHGISRQSIP 170 (394)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSC-EEEEEETTEEEEEECSEEEECCCTTCSTGGGSC
T ss_pred HHHHHHHHHHHHhcCCeEEeceeEEEEEEecCCce-EEEEecCCcEEEEEeCEEEECCCCCcHHHHhcC
Confidence 35667788888888999999999999987641333 454 5787 7999999999998865566654
No 86
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=97.91 E-value=4.1e-05 Score=79.91 Aligned_cols=63 Identities=22% Similarity=0.366 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE---eCC-eEEEcCEEEEcCChHHHHHhhCC
Q psy893 230 GAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV---TNG-LEIKAKYVLSNTTAKCTLLDLIP 294 (523)
Q Consensus 230 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~---~~g-~~~~ad~vI~a~~~~~~~~~ll~ 294 (523)
..+.+.|.+.+++.|++|+++++|++|..++ +.++ |+ .+| ++++||.||.|.+.+..+++++.
T Consensus 148 ~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~-~~v~-v~~~~~~G~~~~~a~~vV~ADG~~S~vR~~lG 214 (570)
T 3fmw_A 148 SRTEALLAEHAREAGAEIPRGHEVTRLRQDA-EAVE-VTVAGPSGPYPVRARYGVGCDGGRSTVRRLAA 214 (570)
T ss_dssp HHHHHHHHHHHHHHTEECCBSCEEEECCBCS-SCEE-EEEEETTEEEEEEESEEEECSCSSCHHHHHTT
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcC-CeEE-EEEEeCCCcEEEEeCEEEEcCCCCchHHHHcC
Confidence 4677888888888899999999999999887 5554 44 366 68999999999998876777764
No 87
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=97.79 E-value=0.00032 Score=74.34 Aligned_cols=56 Identities=21% Similarity=0.298 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHHC-Cc-EEEeCceeeEEEECCCC---CeEEEE----eCCe--EEEcCEEEEcCChHH
Q psy893 231 AVSQALARSAQAS-GA-QLFTSQTVTEITLDSDK---RASGVV----TNGL--EIKAKYVLSNTTAKC 287 (523)
Q Consensus 231 ~l~~~l~~~~~~~-G~-~i~~~~~V~~I~~~~~~---~~~~v~----~~g~--~~~ad~vI~a~~~~~ 287 (523)
.+...|.+.+++. |+ +|+.++.|++|..++ + ++++|. .+|+ .+.|+.||+|++...
T Consensus 152 ~~~~~l~~~~~~~~gv~~i~~~~~v~~L~~~~-~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~~ 218 (643)
T 1jnr_A 152 SYKPIIAEAAKMAVGEENIYERVFIFELLKDN-NDPNAVAGAVGFSVREPKFYVFKAKAVILATGGAT 218 (643)
T ss_dssp THHHHHHHHHHHHHCGGGEECSEEEEEEEECT-TCTTBEEEEEEEESSSSCEEEEECSEEEECCCCBC
T ss_pred HHHHHHHHHHHhcCCCcEEEecCEEEEEEEcC-CccceeEEEEEEEecCCcEEEEEcCEEEECCCccc
Confidence 4667777888787 99 999999999999887 6 888876 2454 689999999998765
No 88
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=97.68 E-value=2.1e-05 Score=76.24 Aligned_cols=34 Identities=32% Similarity=0.512 Sum_probs=31.4
Q ss_pred CCChhHHHHHHHHHH--cCCcEEEEccCCCCCccee
Q psy893 1 EAGHNGLVSAAYLAR--AGLSVAVLERRHVLGGAAV 34 (523)
Q Consensus 1 GaG~~GL~aA~~La~--~G~~V~vlE~~~~~GG~~~ 34 (523)
|||++||+||++|++ .|++|+|+||++.+||.+.
T Consensus 72 GaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~ 107 (326)
T 3fpz_A 72 GAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSW 107 (326)
T ss_dssp CCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTT
T ss_pred CCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEE
Confidence 899999999999985 4999999999999999874
No 89
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=97.62 E-value=0.00029 Score=73.29 Aligned_cols=56 Identities=18% Similarity=0.255 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHHH-CCcEEEeCceeeEEEECCCCCeEEEE-eCCeEEEcCEEEEcCChHH
Q psy893 230 GAVSQALARSAQA-SGAQLFTSQTVTEITLDSDKRASGVV-TNGLEIKAKYVLSNTTAKC 287 (523)
Q Consensus 230 ~~l~~~l~~~~~~-~G~~i~~~~~V~~I~~~~~~~~~~v~-~~g~~~~ad~vI~a~~~~~ 287 (523)
..+.+.|.+.+++ .|++| +++.|++|..++ +++++|+ .+|.++.||.||+|++...
T Consensus 123 ~~~~~~L~~~Le~~~GVeI-~~~~Vt~L~~e~-g~V~GV~t~dG~~i~AdaVVLATG~~s 180 (637)
T 2zxi_A 123 KRYREYMKKVCENQENLYI-KQEEVVDIIVKN-NQVVGVRTNLGVEYKTKAVVVTTGTFL 180 (637)
T ss_dssp HHHHHHHHHHHHTCTTEEE-EESCEEEEEESS-SBEEEEEETTSCEEECSEEEECCTTCB
T ss_pred HHHHHHHHHHHHhCCCCEE-EEeEEEEEEecC-CEEEEEEECCCcEEEeCEEEEccCCCc
Confidence 4677888888888 48999 678999999987 8888888 7888999999999999753
No 90
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=97.56 E-value=0.00033 Score=73.08 Aligned_cols=56 Identities=21% Similarity=0.283 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHHH-CCcEEEeCceeeEEEECCCCCeEEEE-eCCeEEEcCEEEEcCChHH
Q psy893 230 GAVSQALARSAQA-SGAQLFTSQTVTEITLDSDKRASGVV-TNGLEIKAKYVLSNTTAKC 287 (523)
Q Consensus 230 ~~l~~~l~~~~~~-~G~~i~~~~~V~~I~~~~~~~~~~v~-~~g~~~~ad~vI~a~~~~~ 287 (523)
..+...|.+.+++ .|++| +++.|+.|..++ +++++|+ .+|.++.||.||+|++.+.
T Consensus 124 ~~~~~~L~e~Le~~~GV~I-~~~~V~~L~~e~-g~V~GV~t~dG~~I~Ad~VVLATGt~s 181 (651)
T 3ces_A 124 VLYRQAVRTALENQPNLMI-FQQAVEDLIVEN-DRVVGAVTQMGLKFRAKAVVLTVGTFL 181 (651)
T ss_dssp HHHHHHHHHHHHTCTTEEE-EECCEEEEEESS-SBEEEEEETTSEEEEEEEEEECCSTTT
T ss_pred HHHHHHHHHHHHhCCCCEE-EEEEEEEEEecC-CEEEEEEECCCCEEECCEEEEcCCCCc
Confidence 4677888888888 59999 678999999887 8888888 7888899999999999764
No 91
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=97.47 E-value=0.0016 Score=66.93 Aligned_cols=58 Identities=21% Similarity=0.288 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHHCC-cEEEeCceeeEEEECCC-CCeEEEE-e--CC-----eEEEcCEEEEcCChHHH
Q psy893 231 AVSQALARSAQASG-AQLFTSQTVTEITLDSD-KRASGVV-T--NG-----LEIKAKYVLSNTTAKCT 288 (523)
Q Consensus 231 ~l~~~l~~~~~~~G-~~i~~~~~V~~I~~~~~-~~~~~v~-~--~g-----~~~~ad~vI~a~~~~~~ 288 (523)
....++.+.+++.| ++|++++.|++|..+++ +++++|+ . +| .++.|+.||+|++...+
T Consensus 222 s~~~~~l~~a~~~~n~~i~~~~~V~~i~~~~~g~~~~gV~~~~~~g~~~~~~~v~A~~VIlaaG~~~s 289 (504)
T 1n4w_A 222 SLDKTYLAAALGTGKVTIQTLHQVKTIRQTKDGGYALTVEQKDTDGKLLATKEISCRYLFLGAGSLGS 289 (504)
T ss_dssp CTTTTHHHHHHHTTSEEEEESEEEEEEEECTTSSEEEEEEEECTTCCEEEEEEEEEEEEEECSHHHHH
T ss_pred CHHHHHHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCccceeEEEeeCEEEEccCCCCC
Confidence 33445555566675 99999999999999852 3688888 4 56 36789999999998865
No 92
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=97.26 E-value=0.00016 Score=69.29 Aligned_cols=33 Identities=36% Similarity=0.648 Sum_probs=29.8
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCCCCccee
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHVLGGAAV 34 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~ 34 (523)
|||++||+||.+|++.|++|+|+||. .+||.|.
T Consensus 13 G~GpAGl~aA~~l~~~g~~V~liE~~-~~gG~~~ 45 (312)
T 4gcm_A 13 GAGPAGMTAAVYASRANLKTVMIERG-IPGGQMA 45 (312)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGGG
T ss_pred CCCHHHHHHHHHHHHCCCCEEEEecC-CCCCeee
Confidence 89999999999999999999999985 5788763
No 93
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=97.09 E-value=0.00024 Score=72.88 Aligned_cols=56 Identities=27% Similarity=0.276 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-eC---C--eEEEcCEEEEcCChH
Q psy893 229 MGAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-TN---G--LEIKAKYVLSNTTAK 286 (523)
Q Consensus 229 ~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~~---g--~~~~ad~vI~a~~~~ 286 (523)
...+.+.+.+.+++.|++|+++++|++|..++ +.+ .|+ .+ | +++.+|.||++++..
T Consensus 238 d~~~~~~l~~~l~~~gV~v~~~~~v~~i~~~~-~~~-~v~~~~~~~g~~~~i~~D~Vi~a~G~~ 299 (491)
T 3urh_A 238 DGEVAKQLQRMLTKQGIDFKLGAKVTGAVKSG-DGA-KVTFEPVKGGEATTLDAEVVLIATGRK 299 (491)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSEEEEEEEEET-TEE-EEEEEETTSCCCEEEEESEEEECCCCE
T ss_pred CHHHHHHHHHHHHhCCCEEEECCeEEEEEEeC-CEE-EEEEEecCCCceEEEEcCEEEEeeCCc
Confidence 35678889999999999999999999999876 443 344 32 5 579999999998854
No 94
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=97.08 E-value=0.00027 Score=67.69 Aligned_cols=28 Identities=25% Similarity=0.329 Sum_probs=26.4
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHV 28 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~ 28 (523)
|||++||+||.+|+++|++|+|+|++..
T Consensus 11 G~GpAGl~AA~~la~~g~~v~liE~~~~ 38 (314)
T 4a5l_A 11 GSGPAAHTAAIYLGRSSLKPVMYEGFMA 38 (314)
T ss_dssp CCSHHHHHHHHHHHHTTCCCEEECCSSG
T ss_pred CCCHHHHHHHHHHHHCCCCEEEEecCCC
Confidence 8999999999999999999999999753
No 95
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=97.08 E-value=0.00031 Score=67.78 Aligned_cols=34 Identities=32% Similarity=0.386 Sum_probs=32.1
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCCCCccee
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHVLGGAAV 34 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~ 34 (523)
|||++||+||..|++.|++|+|+|+++.+||...
T Consensus 14 G~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~~ 47 (332)
T 3lzw_A 14 GGGPVGLFTAFYGGMRQASVKIIESLPQLGGQLS 47 (332)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHH
T ss_pred CCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceeh
Confidence 8999999999999999999999999999998763
No 96
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.06 E-value=0.00031 Score=71.15 Aligned_cols=34 Identities=38% Similarity=0.535 Sum_probs=32.3
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCCCCccee
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHVLGGAAV 34 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~ 34 (523)
|||++||+||..|+++|++|+|+|+++.+||...
T Consensus 129 GgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG~l~ 162 (456)
T 2vdc_G 129 GAGPAGLAAAEELRAKGYEVHVYDRYDRMGGLLV 162 (456)
T ss_dssp CCSHHHHHHHHHHHHHTCCEEEECSSSSCSTHHH
T ss_pred CCCHHHHHHHHHHHHCCCeEEEEeccCCCCCeee
Confidence 8999999999999999999999999999999764
No 97
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=97.06 E-value=0.0003 Score=67.13 Aligned_cols=31 Identities=26% Similarity=0.344 Sum_probs=28.1
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCCCCcc
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHVLGGA 32 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~ 32 (523)
|||++||+||.+|+++|++|+|+|++. +||.
T Consensus 13 GaGpAGlsAA~~lar~g~~v~lie~~~-~gg~ 43 (304)
T 4fk1_A 13 GAGPAGLNASLVLGRARKQIALFDNNT-NRNR 43 (304)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEEECSC-CGGG
T ss_pred CCCHHHHHHHHHHHHCCCCEEEEeCCC-CCCe
Confidence 899999999999999999999999975 5654
No 98
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.06 E-value=0.0022 Score=65.67 Aligned_cols=55 Identities=9% Similarity=0.055 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-eCC----eEEEcCEEEEcCCh
Q psy893 229 MGAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-TNG----LEIKAKYVLSNTTA 285 (523)
Q Consensus 229 ~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~~g----~~~~ad~vI~a~~~ 285 (523)
...+.+.+.+.+++.|++|++|++|++|..+ +....+. .|| +++.||.||+|++.
T Consensus 271 ~~~~~~~~~~~L~~~GV~v~~~~~v~~v~~~--~~~~~~~~~dg~~~~~~i~ad~viwa~Gv 330 (502)
T 4g6h_A 271 EKKLSSYAQSHLENTSIKVHLRTAVAKVEEK--QLLAKTKHEDGKITEETIPYGTLIWATGN 330 (502)
T ss_dssp CHHHHHHHHHHHHHTTCEEETTEEEEEECSS--EEEEEEECTTSCEEEEEEECSEEEECCCE
T ss_pred CHHHHHHHHHHHHhcceeeecCceEEEEeCC--ceEEEEEecCcccceeeeccCEEEEccCC
Confidence 3578888999999999999999999999643 2222333 455 36899999999873
No 99
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=97.03 E-value=0.00037 Score=67.89 Aligned_cols=55 Identities=20% Similarity=0.112 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-eCCeEEEcCEEEEcCChHH
Q psy893 231 AVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-TNGLEIKAKYVLSNTTAKC 287 (523)
Q Consensus 231 ~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~~g~~~~ad~vI~a~~~~~ 287 (523)
.+.+.+.+.+++.|++++++++|++|..++ +++.+|+ .+| ++.+|+||+|++.+.
T Consensus 77 ~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~-~~~~~v~~~~g-~~~~d~vV~AtG~~~ 132 (357)
T 4a9w_A 77 EVLAYLAQYEQKYALPVLRPIRVQRVSHFG-ERLRVVARDGR-QWLARAVISATGTWG 132 (357)
T ss_dssp HHHHHHHHHHHHTTCCEECSCCEEEEEEET-TEEEEEETTSC-EEEEEEEEECCCSGG
T ss_pred HHHHHHHHHHHHcCCEEEcCCEEEEEEECC-CcEEEEEeCCC-EEEeCEEEECCCCCC
Confidence 455666777778899999999999999886 5543377 666 899999999999765
No 100
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=97.02 E-value=0.0003 Score=72.05 Aligned_cols=56 Identities=27% Similarity=0.232 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-eCCeEEEcCEEEEcCChHH
Q psy893 230 GAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-TNGLEIKAKYVLSNTTAKC 287 (523)
Q Consensus 230 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~~g~~~~ad~vI~a~~~~~ 287 (523)
..+.+.+.+.+++.|++|+++++|++|..++ +++ .|+ .+|+++.+|.||++++...
T Consensus 232 ~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~-~~v-~v~~~~g~~i~aD~Vi~A~G~~p 288 (484)
T 3o0h_A 232 YDLRQLLNDAMVAKGISIIYEATVSQVQSTE-NCY-NVVLTNGQTICADRVMLATGRVP 288 (484)
T ss_dssp HHHHHHHHHHHHHHTCEEESSCCEEEEEECS-SSE-EEEETTSCEEEESEEEECCCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEeeC-CEE-EEEECCCcEEEcCEEEEeeCCCc
Confidence 4678889999999999999999999999876 655 566 7888899999999998643
No 101
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.00 E-value=0.00033 Score=71.37 Aligned_cols=34 Identities=32% Similarity=0.433 Sum_probs=32.5
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCCCCccee
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHVLGGAAV 34 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~ 34 (523)
|||++||+||..|++.|++|+|+||++.+||.|.
T Consensus 11 GgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~ 44 (466)
T 3l8k_A 11 GAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCL 44 (466)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHH
T ss_pred CCCHHHHHHHHHHHhCCCeEEEEECCCCCCCccc
Confidence 8999999999999999999999999999999875
No 102
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=97.00 E-value=0.00041 Score=65.53 Aligned_cols=56 Identities=20% Similarity=0.326 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHH-CCcEEEeCceeeEEEECCCCCeEEEE-e---------CC-----eEEEcCEEEEcCChH
Q psy893 230 GAVSQALARSAQA-SGAQLFTSQTVTEITLDSDKRASGVV-T---------NG-----LEIKAKYVLSNTTAK 286 (523)
Q Consensus 230 ~~l~~~l~~~~~~-~G~~i~~~~~V~~I~~~~~~~~~~v~-~---------~g-----~~~~ad~vI~a~~~~ 286 (523)
..+...|.+.+.+ .|++++++++|++|..++ +++.+|+ . +| .+++||.||+|++..
T Consensus 119 ~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~-~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~ 190 (284)
T 1rp0_A 119 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKG-NRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHD 190 (284)
T ss_dssp HHHHHHHHHHHHTSTTEEEEETEEEEEEEEET-TEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSS
T ss_pred HHHHHHHHHHHHhcCCCEEEcCcEEEEEEecC-CeEEEEEEeccccccccCccccCceEEEECCEEEECCCCc
Confidence 3566677777765 699999999999999887 7777776 3 33 578999999999854
No 103
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=96.99 E-value=0.00039 Score=66.86 Aligned_cols=33 Identities=33% Similarity=0.467 Sum_probs=30.6
Q ss_pred CCChhHHHHHHHHHHc--CCcEEEEccCCCCCcce
Q psy893 1 EAGHNGLVSAAYLARA--GLSVAVLERRHVLGGAA 33 (523)
Q Consensus 1 GaG~~GL~aA~~La~~--G~~V~vlE~~~~~GG~~ 33 (523)
|||++||+||+.|+++ |++|+|+|++..+||.+
T Consensus 86 GgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~ 120 (344)
T 3jsk_A 86 GAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGA 120 (344)
T ss_dssp CCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTT
T ss_pred CccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCcc
Confidence 8999999999999997 99999999999888754
No 104
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=96.99 E-value=0.0004 Score=69.18 Aligned_cols=58 Identities=5% Similarity=0.075 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-eCCeEEEcCEEEEcCChHHHHHhhC
Q psy893 232 VSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-TNGLEIKAKYVLSNTTAKCTLLDLI 293 (523)
Q Consensus 232 l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~~g~~~~ad~vI~a~~~~~~~~~ll 293 (523)
|-+.|.+. .+.+|+++++|++++..+++++ .|+ .||++++||.||-|-+.+...++.+
T Consensus 114 L~~~L~~~---~~~~v~~~~~v~~~~~~~~~~v-~v~~~dG~~~~adlvVgADG~~S~vR~~l 172 (412)
T 4hb9_A 114 LKEILNKG---LANTIQWNKTFVRYEHIENGGI-KIFFADGSHENVDVLVGADGSNSKVRKQY 172 (412)
T ss_dssp HHHHHHTT---CTTTEECSCCEEEEEECTTSCE-EEEETTSCEEEESEEEECCCTTCHHHHHH
T ss_pred HHHHHHhh---ccceEEEEEEEEeeeEcCCCeE-EEEECCCCEEEeeEEEECCCCCcchHHHh
Confidence 44444442 3567999999999988663544 477 8999999999999988876666554
No 105
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=96.98 E-value=0.00037 Score=67.48 Aligned_cols=34 Identities=29% Similarity=0.449 Sum_probs=32.0
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCCCCccee
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHVLGGAAV 34 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~ 34 (523)
|||++||+||..|+++|++|+|+|+++.+||.+.
T Consensus 12 G~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~ 45 (335)
T 2zbw_A 12 GAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQLT 45 (335)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHHH
T ss_pred CCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCeee
Confidence 8999999999999999999999999999998763
No 106
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=96.98 E-value=0.00038 Score=68.20 Aligned_cols=55 Identities=15% Similarity=0.191 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-e--CC--eEEEcCEEEEcCChH
Q psy893 231 AVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-T--NG--LEIKAKYVLSNTTAK 286 (523)
Q Consensus 231 ~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~--~g--~~~~ad~vI~a~~~~ 286 (523)
.+.+.|.+.+++.|++++++++|++|..++ +++.+|+ . +| +++.+|.||++++..
T Consensus 203 ~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~-~~v~~v~~~~~~g~~~~i~~D~vi~a~G~~ 262 (360)
T 3ab1_A 203 KTAHEVERARANGTIDVYLETEVASIEESN-GVLTRVHLRSSDGSKWTVEADRLLILIGFK 262 (360)
T ss_dssp HHHHSSHHHHHHTSEEEESSEEEEEEEEET-TEEEEEEEEETTCCEEEEECSEEEECCCBC
T ss_pred HHHHHHHHHhhcCceEEEcCcCHHHhccCC-CceEEEEEEecCCCeEEEeCCEEEECCCCC
Confidence 566677788888899999999999998876 6665666 4 67 578999999988744
No 107
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=96.97 E-value=0.00039 Score=66.43 Aligned_cols=33 Identities=33% Similarity=0.547 Sum_probs=30.9
Q ss_pred CCChhHHHHHHHHHHc--CCcEEEEccCCCCCcce
Q psy893 1 EAGHNGLVSAAYLARA--GLSVAVLERRHVLGGAA 33 (523)
Q Consensus 1 GaG~~GL~aA~~La~~--G~~V~vlE~~~~~GG~~ 33 (523)
|||++||+||+.|+++ |++|+|+|+++.+||.+
T Consensus 72 G~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~ 106 (326)
T 2gjc_A 72 GAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGS 106 (326)
T ss_dssp CCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTT
T ss_pred CccHHHHHHHHHHHhcCCCCeEEEEecCccccccc
Confidence 8999999999999999 99999999999998754
No 108
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=96.96 E-value=0.00044 Score=66.36 Aligned_cols=32 Identities=28% Similarity=0.291 Sum_probs=30.2
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCCCCccee
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHVLGGAAV 34 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~ 34 (523)
|||++||+||..|+++|++|+|+|++ +||.+.
T Consensus 22 G~G~aGl~aA~~l~~~g~~v~lie~~--~gg~~~ 53 (323)
T 3f8d_A 22 GLGPAAYGAALYSARYMLKTLVIGET--PGGQLT 53 (323)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEEESS--TTGGGG
T ss_pred CccHHHHHHHHHHHHCCCcEEEEecc--CCCeec
Confidence 89999999999999999999999998 888765
No 109
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=96.96 E-value=0.0023 Score=66.17 Aligned_cols=50 Identities=14% Similarity=0.165 Sum_probs=40.1
Q ss_pred HCCcEEEeCceeeEEEECCCCCeEEEE--eCCe--EEEcCEEEEcCChHHHHHhhC
Q psy893 242 ASGAQLFTSQTVTEITLDSDKRASGVV--TNGL--EIKAKYVLSNTTAKCTLLDLI 293 (523)
Q Consensus 242 ~~G~~i~~~~~V~~I~~~~~~~~~~v~--~~g~--~~~ad~vI~a~~~~~~~~~ll 293 (523)
..+.+|++++.|.+|..++ +++++|. .++. ++.|+.||+++++..+- +||
T Consensus 223 r~nl~v~~~~~v~~i~~~~-~~a~gv~~~~~~~~~~~~a~~VILsAGai~SP-~LL 276 (526)
T 3t37_A 223 RKNLTILTGSRVRRLKLEG-NQVRSLEVVGRQGSAEVFADQIVLCAGALESP-ALL 276 (526)
T ss_dssp CTTEEEECSCEEEEEEEET-TEEEEEEEEETTEEEEEEEEEEEECSHHHHHH-HHH
T ss_pred CCCeEEEeCCEEEEEEecC-CeEEEEEEEecCceEEEeecceEEcccccCCc-chh
Confidence 3468999999999999998 8999988 3443 56789999999988764 443
No 110
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=96.93 E-value=0.00037 Score=70.93 Aligned_cols=57 Identities=12% Similarity=0.171 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE--eCCeEEEcCEEEEcCChHH
Q psy893 229 MGAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV--TNGLEIKAKYVLSNTTAKC 287 (523)
Q Consensus 229 ~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~--~~g~~~~ad~vI~a~~~~~ 287 (523)
...+.+.+.+.+++.|++|+++++|++|..++ +++..|+ .+|+ +.+|.||++++...
T Consensus 210 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~-~~~~~v~~~~~g~-i~aD~Vv~a~G~~p 268 (463)
T 4dna_A 210 DQDMRRGLHAAMEEKGIRILCEDIIQSVSADA-DGRRVATTMKHGE-IVADQVMLALGRMP 268 (463)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEECT-TSCEEEEESSSCE-EEESEEEECSCEEE
T ss_pred CHHHHHHHHHHHHHCCCEEECCCEEEEEEEcC-CCEEEEEEcCCCe-EEeCEEEEeeCccc
Confidence 45778899999999999999999999999876 4433454 4676 99999999998754
No 111
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=96.92 E-value=0.00055 Score=67.15 Aligned_cols=50 Identities=26% Similarity=0.207 Sum_probs=40.2
Q ss_pred HHHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEEeCCeEEEcCEEEEcCChHHHHHhhCC
Q psy893 229 MGAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVVTNGLEIKAKYVLSNTTAKCTLLDLIP 294 (523)
Q Consensus 229 ~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~~~g~~~~ad~vI~a~~~~~~~~~ll~ 294 (523)
...+...|.+.++++|++|+. ++|++|..+ . + +||.||+|++++. ..|++
T Consensus 141 p~~~~~~l~~~~~~~G~~i~~-~~v~~l~~~-----~-------~-~a~~VV~A~G~~s--~~l~~ 190 (363)
T 1c0p_A 141 APKYCQYLARELQKLGATFER-RTVTSLEQA-----F-------D-GADLVVNATGLGA--KSIAG 190 (363)
T ss_dssp HHHHHHHHHHHHHHTTCEEEE-CCCSBGGGT-----C-------S-SCSEEEECCGGGG--GTSBT
T ss_pred HHHHHHHHHHHHHHCCCEEEE-EEcccHhhc-----C-------c-CCCEEEECCCcch--hhccC
Confidence 468999999999999999998 999887532 0 2 7999999999997 45554
No 112
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=96.92 E-value=0.00045 Score=66.79 Aligned_cols=35 Identities=31% Similarity=0.395 Sum_probs=31.3
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccC----CCCCcceee
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERR----HVLGGAAVT 35 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~----~~~GG~~~s 35 (523)
|||++||+||..|+++|++|+|+|++ ..+||....
T Consensus 29 G~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~~ 67 (338)
T 3itj_A 29 GSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTT 67 (338)
T ss_dssp CCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGG
T ss_pred CcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCccccc
Confidence 89999999999999999999999994 478887653
No 113
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=96.89 E-value=0.00061 Score=65.64 Aligned_cols=33 Identities=39% Similarity=0.610 Sum_probs=30.8
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCCCCccee
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHVLGGAAV 34 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~ 34 (523)
|||++||+||..|+++|++|+|+|++ .+||.+.
T Consensus 15 G~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~ 47 (325)
T 2q7v_A 15 GGGPAGLTAAIYTGRAQLSTLILEKG-MPGGQIA 47 (325)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGGG
T ss_pred CCCHHHHHHHHHHHHcCCcEEEEeCC-CCCcccc
Confidence 89999999999999999999999998 6888765
No 114
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=96.88 E-value=0.00048 Score=70.18 Aligned_cols=56 Identities=18% Similarity=0.204 Sum_probs=44.0
Q ss_pred HHHHHHHHHHH-HHCCcEEEeCceeeEEEECCCCCeEEEE-e--CC--eEEEcCEEEEcCChHH
Q psy893 230 GAVSQALARSA-QASGAQLFTSQTVTEITLDSDKRASGVV-T--NG--LEIKAKYVLSNTTAKC 287 (523)
Q Consensus 230 ~~l~~~l~~~~-~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~--~g--~~~~ad~vI~a~~~~~ 287 (523)
..+.+.+.+.+ ++.|++|+++++|++|..++ +++ .|+ . +| +++.+|.||++++...
T Consensus 215 ~~~~~~l~~~l~~~~gv~i~~~~~v~~i~~~~-~~~-~v~~~~~~g~~~~i~~D~vv~a~G~~p 276 (468)
T 2qae_A 215 EDVTNALVGALAKNEKMKFMTSTKVVGGTNNG-DSV-SLEVEGKNGKRETVTCEALLVSVGRRP 276 (468)
T ss_dssp HHHHHHHHHHHHHHTCCEEECSCEEEEEEECS-SSE-EEEEECC---EEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHhhcCCcEEEeCCEEEEEEEcC-CeE-EEEEEcCCCceEEEECCEEEECCCccc
Confidence 46778888999 89999999999999999876 443 355 4 67 6799999999988653
No 115
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=96.85 E-value=0.00066 Score=65.16 Aligned_cols=33 Identities=45% Similarity=0.771 Sum_probs=30.0
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCCCCccee
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHVLGGAAV 34 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~ 34 (523)
|||++||+||..|+++|++|+|+|+ ..+||.+.
T Consensus 23 G~G~aGl~aA~~l~~~g~~v~lie~-~~~gg~~~ 55 (319)
T 3cty_A 23 GAGAAGFSAAVYAARSGFSVAILDK-AVAGGLTA 55 (319)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEEES-SSTTGGGG
T ss_pred CcCHHHHHHHHHHHhCCCcEEEEeC-CCCCcccc
Confidence 8999999999999999999999999 46788764
No 116
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=96.84 E-value=0.00063 Score=70.65 Aligned_cols=34 Identities=35% Similarity=0.406 Sum_probs=32.1
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCCCCccee
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHVLGGAAV 34 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~ 34 (523)
|||++||+||..|+++|++|+|+|+++.+||.+.
T Consensus 23 GaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~ 56 (542)
T 1w4x_A 23 GAGFSGLYALYRLRELGRSVHVIETAGDVGGVWY 56 (542)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHH
T ss_pred CccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccc
Confidence 8999999999999999999999999999998764
No 117
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=96.82 E-value=0.00039 Score=67.85 Aligned_cols=51 Identities=16% Similarity=0.070 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEEeCCeEEEcCEEEEcCChHHHHHhhCC
Q psy893 229 MGAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVVTNGLEIKAKYVLSNTTAKCTLLDLIP 294 (523)
Q Consensus 229 ~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~~~g~~~~ad~vI~a~~~~~~~~~ll~ 294 (523)
...+..+|.+.++++|++|+. ++|++|...+ .++||.||+|++++. ..|++
T Consensus 141 p~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~~------------~~~a~~VV~A~G~~s--~~l~~ 191 (351)
T 3g3e_A 141 GKNYLQWLTERLTERGVKFFQ-RKVESFEEVA------------REGADVIVNCTGVWA--GALQR 191 (351)
T ss_dssp HHHHHHHHHHHHHHTTCEEEE-CCCCCHHHHH------------HTTCSEEEECCGGGG--GGTSC
T ss_pred HHHHHHHHHHHHHHCCCEEEE-EEeCCHHHhh------------cCCCCEEEECCCcCh--HhhcC
Confidence 458899999999999999988 8888775432 156999999999987 46654
No 118
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=96.81 E-value=0.00056 Score=65.34 Aligned_cols=33 Identities=33% Similarity=0.583 Sum_probs=30.6
Q ss_pred CCChhHHHHHHHHHHcCCcEEE-EccCCCCCccee
Q psy893 1 EAGHNGLVSAAYLARAGLSVAV-LERRHVLGGAAV 34 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~v-lE~~~~~GG~~~ 34 (523)
|||++||+||..|+++|++|+| +|| +.+||.+.
T Consensus 11 G~G~aGl~aA~~l~~~g~~v~li~e~-~~~gG~~~ 44 (315)
T 3r9u_A 11 GGGPAGLSAGLYATRGGLKNVVMFEK-GMPGGQIT 44 (315)
T ss_dssp CCSHHHHHHHHHHHHHTCSCEEEECS-SSTTGGGG
T ss_pred CCCHHHHHHHHHHHHCCCCeEEEEeC-CCCCceee
Confidence 8999999999999999999999 999 67898764
No 119
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=96.79 E-value=0.00068 Score=70.07 Aligned_cols=57 Identities=18% Similarity=0.304 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCe--EEEE-eCCe-EEEcCEEEEcCChH
Q psy893 230 GAVSQALARSAQASGAQLFTSQTVTEITLDSDKRA--SGVV-TNGL-EIKAKYVLSNTTAK 286 (523)
Q Consensus 230 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~--~~v~-~~g~-~~~ad~vI~a~~~~ 286 (523)
..+.+.+.+.+++.|++|+++++|++|..++++++ +.|+ .+|+ ++.||.||++++..
T Consensus 255 ~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~ 315 (523)
T 1mo9_A 255 NETRAYVLDRMKEQGMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGEQ 315 (523)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCEEEEEEECTTSBEEEEEEEETTEEEEEECSCEEECCCCE
T ss_pred HHHHHHHHHHHHhCCcEEEECCEEEEEEEcCCCceEEEEEEECCCcEEEEcCEEEECcCCc
Confidence 46788899999999999999999999998652443 3455 6777 89999999999854
No 120
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=96.77 E-value=0.00065 Score=69.38 Aligned_cols=57 Identities=18% Similarity=0.220 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHHCCcEEEeCceeeEEEEC-CCCCeEEEE-e-----CCeEEEcCEEEEcCChHH
Q psy893 230 GAVSQALARSAQASGAQLFTSQTVTEITLD-SDKRASGVV-T-----NGLEIKAKYVLSNTTAKC 287 (523)
Q Consensus 230 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~-~~~~~~~v~-~-----~g~~~~ad~vI~a~~~~~ 287 (523)
..+.+.+.+.+++.|++|+++++|++|..+ + ++.+.|+ . +++++.+|.||++++...
T Consensus 224 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~-~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p 287 (478)
T 1v59_A 224 GEVAKATQKFLKKQGLDFKLSTKVISAKRNDD-KNVVEIVVEDTKTNKQENLEAEVLLVAVGRRP 287 (478)
T ss_dssp HHHHHHHHHHHHHTTCEEECSEEEEEEEEETT-TTEEEEEEEETTTTEEEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEecC-CCeEEEEEEEcCCCCceEEECCEEEECCCCCc
Confidence 467888899999999999999999999872 2 3344555 4 356799999999998654
No 121
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=96.76 E-value=0.00074 Score=68.31 Aligned_cols=34 Identities=38% Similarity=0.462 Sum_probs=31.9
Q ss_pred CCChhHHHHHHHHHHcCC--cEEEEccCCCCCccee
Q psy893 1 EAGHNGLVSAAYLARAGL--SVAVLERRHVLGGAAV 34 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~--~V~vlE~~~~~GG~~~ 34 (523)
|||++||+||..|++.|. +|+|+|+++.+||...
T Consensus 13 GaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~ 48 (447)
T 2gv8_A 13 GAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWN 48 (447)
T ss_dssp CCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCS
T ss_pred CccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeec
Confidence 899999999999999999 9999999999998654
No 122
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=96.76 E-value=0.00068 Score=68.78 Aligned_cols=57 Identities=25% Similarity=0.209 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-eCCeEEEcCEEEEcCChHH
Q psy893 229 MGAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-TNGLEIKAKYVLSNTTAKC 287 (523)
Q Consensus 229 ~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~~g~~~~ad~vI~a~~~~~ 287 (523)
...+.+.+.+.+++.|++|+++++|++|..++ ++ +.++ .+|+++.+|.||++++...
T Consensus 207 ~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~-~~-v~v~~~~g~~i~~D~vv~A~G~~p 264 (455)
T 2yqu_A 207 DLEVSRAAERVFKKQGLTIRTGVRVTAVVPEA-KG-ARVELEGGEVLEADRVLVAVGRRP 264 (455)
T ss_dssp CHHHHHHHHHHHHHHTCEEECSCCEEEEEEET-TE-EEEEETTSCEEEESEEEECSCEEE
T ss_pred CHHHHHHHHHHHHHCCCEEEECCEEEEEEEeC-CE-EEEEECCCeEEEcCEEEECcCCCc
Confidence 45788889999999999999999999999865 43 3455 5788899999999998764
No 123
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=96.75 E-value=0.00069 Score=69.13 Aligned_cols=56 Identities=20% Similarity=0.141 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE------eCCeEEEcCEEEEcCChH
Q psy893 230 GAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV------TNGLEIKAKYVLSNTTAK 286 (523)
Q Consensus 230 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~------~~g~~~~ad~vI~a~~~~ 286 (523)
..+.+.+.+.+++.|++|+++++|++|..++ ++.+.|+ .+++++.+|.||++++..
T Consensus 220 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~-~~~~~v~~~~~~~~~~~~i~~D~vv~a~G~~ 281 (474)
T 1zmd_A 220 MEISKNFQRILQKQGFKFKLNTKVTGATKKS-DGKIDVSIEAASGGKAEVITCDVLLVCIGRR 281 (474)
T ss_dssp HHHHHHHHHHHHHTTCEEECSEEEEEEEECT-TSCEEEEEEETTSCCCEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCceEEEEEEcC-CceEEEEEEecCCCCceEEEcCEEEECcCCC
Confidence 4678888999999999999999999999876 4422343 245689999999999865
No 124
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=96.75 E-value=0.00065 Score=72.72 Aligned_cols=35 Identities=34% Similarity=0.448 Sum_probs=33.1
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCCCCcceee
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHVLGGAAVT 35 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~s 35 (523)
|||++||+||+.|+++|++|+|+|+++.+||.+..
T Consensus 398 GgG~AGl~aA~~La~~G~~V~liE~~~~~GG~~~~ 432 (690)
T 3k30_A 398 GAGPSGLEAARALGVRGYDVVLAEAGRDLGGRVTQ 432 (690)
T ss_dssp CCSHHHHHHHHHHHHHTCEEEEECSSSSSCTHHHH
T ss_pred CCCHHHHHHHHHHHHCCCeEEEEecCCCCCCEeee
Confidence 89999999999999999999999999999998754
No 125
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=96.73 E-value=0.00079 Score=68.73 Aligned_cols=57 Identities=11% Similarity=0.130 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-eCC---eEEEcCEEEEcCChHH
Q psy893 229 MGAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-TNG---LEIKAKYVLSNTTAKC 287 (523)
Q Consensus 229 ~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~~g---~~~~ad~vI~a~~~~~ 287 (523)
...+.+.+.+.+++.|++++++++|++|..++ +++. |+ .++ +++.+|.||++++...
T Consensus 220 ~~~~~~~l~~~l~~~Gv~v~~~~~v~~i~~~~-~~~~-v~~~~~~g~~~~~~D~vi~a~G~~p 280 (476)
T 3lad_A 220 DEQVAKEAQKILTKQGLKILLGARVTGTEVKN-KQVT-VKFVDAEGEKSQAFDKLIVAVGRRP 280 (476)
T ss_dssp CHHHHHHHHHHHHHTTEEEEETCEEEEEEECS-SCEE-EEEESSSEEEEEEESEEEECSCEEE
T ss_pred CHHHHHHHHHHHHhCCCEEEECCEEEEEEEcC-CEEE-EEEEeCCCcEEEECCEEEEeeCCcc
Confidence 35688889999999999999999999999876 5543 55 543 5789999999998654
No 126
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.72 E-value=0.00078 Score=68.62 Aligned_cols=56 Identities=16% Similarity=0.224 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-e---CC--eEEEcCEEEEcCChHH
Q psy893 230 GAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-T---NG--LEIKAKYVLSNTTAKC 287 (523)
Q Consensus 230 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~---~g--~~~~ad~vI~a~~~~~ 287 (523)
..+.+.+.+.+++.|++|+++++|.+|..++ +++ .|+ . +| +++.+|.||++++...
T Consensus 218 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~-~~~-~v~~~~~~~g~~~~~~~D~vv~a~G~~p 279 (470)
T 1dxl_A 218 AEIRKQFQRSLEKQGMKFKLKTKVVGVDTSG-DGV-KLTVEPSAGGEQTIIEADVVLVSAGRTP 279 (470)
T ss_dssp HHHHHHHHHHHHHSSCCEECSEEEEEEECSS-SSE-EEEEEESSSCCCEEEEESEEECCCCEEE
T ss_pred HHHHHHHHHHHHHcCCEEEeCCEEEEEEEcC-CeE-EEEEEecCCCcceEEECCEEEECCCCCc
Confidence 4677888999999999999999999998765 443 344 3 55 6899999999998664
No 127
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=96.72 E-value=0.00087 Score=66.83 Aligned_cols=56 Identities=21% Similarity=0.277 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHHHHCCcEEEeCceee---------EEEECCCCCeEEEE-eCCeEEEcCEEEEcCChHH
Q psy893 229 MGAVSQALARSAQASGAQLFTSQTVT---------EITLDSDKRASGVV-TNGLEIKAKYVLSNTTAKC 287 (523)
Q Consensus 229 ~~~l~~~l~~~~~~~G~~i~~~~~V~---------~I~~~~~~~~~~v~-~~g~~~~ad~vI~a~~~~~ 287 (523)
...+.+.|.+.+++.|++|+++++|+ +|..++ +++ +|+ .+| +++||.||+|++++.
T Consensus 171 ~~~l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~~-~~v-~v~~~~g-~i~a~~VV~A~G~~s 236 (405)
T 3c4n_A 171 PGSLALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVTN-THQ-IVVHETR-QIRAGVIIVAAGAAG 236 (405)
T ss_dssp HHHHHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC---------CBCCE-EEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCEEEeccccccccceEeeC-CeE-EEEECCc-EEECCEEEECCCccH
Confidence 35789999999999999999999999 888776 665 566 444 899999999999885
No 128
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=96.72 E-value=0.00086 Score=66.69 Aligned_cols=59 Identities=10% Similarity=0.112 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-eCCeEEEcCEEEEcCChHHHHHhhC
Q psy893 231 AVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-TNGLEIKAKYVLSNTTAKCTLLDLI 293 (523)
Q Consensus 231 ~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~~g~~~~ad~vI~a~~~~~~~~~ll 293 (523)
.|.+.|.+.++ +++|+++++|++|..++ +++ .|+ .+|++++||.||.|.+.+...++.+
T Consensus 129 ~l~~~L~~~~~--~~~i~~~~~v~~i~~~~-~~v-~v~~~~g~~~~ad~vV~AdG~~S~vR~~l 188 (398)
T 2xdo_A 129 DLRAILLNSLE--NDTVIWDRKLVMLEPGK-KKW-TLTFENKPSETADLVILANGGMSKVRKFV 188 (398)
T ss_dssp HHHHHHHHTSC--TTSEEESCCEEEEEECS-SSE-EEEETTSCCEEESEEEECSCTTCSCCTTT
T ss_pred HHHHHHHhhcC--CCEEEECCEEEEEEECC-CEE-EEEECCCcEEecCEEEECCCcchhHHhhc
Confidence 55556666553 36899999999999887 655 466 7888899999999999876444444
No 129
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=96.67 E-value=0.00083 Score=68.84 Aligned_cols=55 Identities=15% Similarity=0.141 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-e--CC--eEEEcCEEEEcCChHH
Q psy893 230 GAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-T--NG--LEIKAKYVLSNTTAKC 287 (523)
Q Consensus 230 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~--~g--~~~~ad~vI~a~~~~~ 287 (523)
..+.+.+.+.+++. ++|+++++|++|..++ +++. |+ . +| +++.+|.||++++...
T Consensus 215 ~~~~~~l~~~l~~~-V~i~~~~~v~~i~~~~-~~v~-v~~~~~~G~~~~i~~D~Vi~a~G~~p 274 (492)
T 3ic9_A 215 EEMKRYAEKTFNEE-FYFDAKARVISTIEKE-DAVE-VIYFDKSGQKTTESFQYVLAATGRKA 274 (492)
T ss_dssp HHHHHHHHHHHHTT-SEEETTCEEEEEEECS-SSEE-EEEECTTCCEEEEEESEEEECSCCEE
T ss_pred HHHHHHHHHHHhhC-cEEEECCEEEEEEEcC-CEEE-EEEEeCCCceEEEECCEEEEeeCCcc
Confidence 56788888888887 9999999999999876 6554 55 4 67 6899999999998653
No 130
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=96.67 E-value=0.0011 Score=65.47 Aligned_cols=51 Identities=10% Similarity=0.021 Sum_probs=40.2
Q ss_pred HHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEEeCCeEEEcCEEEEcCChHHHHHhhC
Q psy893 230 GAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVVTNGLEIKAKYVLSNTTAKCTLLDLI 293 (523)
Q Consensus 230 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~~~g~~~~ad~vI~a~~~~~~~~~ll 293 (523)
..+.+.|.+.+++.|++|+++++|++|.... +++||.||.|.+.+.. ++.+
T Consensus 98 ~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~------------~~~ad~vV~AdG~~S~-R~~l 148 (381)
T 3c4a_A 98 RGLVHALRDKCRSQGIAIRFESPLLEHGELP------------LADYDLVVLANGVNHK-TAHF 148 (381)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCCCSGGGCC------------GGGCSEEEECCGGGGG-TCCS
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEeccchhcc------------cccCCEEEECCCCCch-HHhh
Confidence 4778889999988999999999998875311 2479999999998875 5544
No 131
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=96.67 E-value=0.00086 Score=68.54 Aligned_cols=56 Identities=5% Similarity=-0.019 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-eC----CeEEEcCEEEEcCChHH
Q psy893 230 GAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-TN----GLEIKAKYVLSNTTAKC 287 (523)
Q Consensus 230 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~~----g~~~~ad~vI~a~~~~~ 287 (523)
..+.+.+.+.+++.|++|+++++|.+|..++ +. ..|+ .+ |+++.+|.||++++...
T Consensus 226 ~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~-~~-~~v~~~~~~~~g~~~~~D~vv~a~G~~p 286 (482)
T 1ojt_A 226 RDLVKVWQKQNEYRFDNIMVNTKTVAVEPKE-DG-VYVTFEGANAPKEPQRYDAVLVAAGRAP 286 (482)
T ss_dssp HHHHHHHHHHHGGGEEEEECSCEEEEEEEET-TE-EEEEEESSSCCSSCEEESCEEECCCEEE
T ss_pred HHHHHHHHHHHHhcCCEEEECCEEEEEEEcC-Ce-EEEEEeccCCCceEEEcCEEEECcCCCc
Confidence 4677888899999999999999999998765 43 3466 66 67789999999998654
No 132
>2e1m_C L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=96.67 E-value=0.00011 Score=64.21 Aligned_cols=93 Identities=11% Similarity=-0.023 Sum_probs=53.0
Q ss_pred HHHHHHHHHHHHHHhC-CCCCCCeEEe-EecChhhHHHhcCCCCCccccCcccccccccCCCCCCCCCCCCCCCCCCeEe
Q psy893 417 KANYATNVFSSIEQYC-PGFTQDIVGY-EILTPPDLEKEFGLTGGNIFHGALSLNQLLFNRPLPIQGPSSPFTLIPHLLL 494 (523)
Q Consensus 417 k~~~~~~~~~~l~~~~-P~~~~~i~~~-~~~tP~~~~~~~~~~~G~~~g~~~~~~q~~~~rp~~~~~~~~~~t~i~~Lyl 494 (523)
.+++.+.+++.|.+++ |+. +.++.. .+. .+|.+. ....|+. .. ..+.+....++ ..+.|..+|||
T Consensus 56 ~~e~~~~~l~~L~~~~g~~~-~~~~~~~~~~--~~W~~d-p~~~Ga~-s~-~~pg~~~~~~~-------~l~~p~grl~F 122 (181)
T 2e1m_C 56 DAERYGYALENLQSVHGRRI-EVFYTGAGQT--QSWLRD-PYACGEA-AV-YTPHQMTAFHL-------DVVRPEGPVYF 122 (181)
T ss_dssp TTTTHHHHHHHHHHHHCGGG-GGTEEEEEEE--EESSSC-TTTSSSE-EC-CCTTHHHHHHH-------HHHSCBTTEEE
T ss_pred HHHHHHHHHHHHHHHhCCCc-HhhccCccee--cccCCC-CCCCCcc-cC-cCCCchHHHHH-------HHhCCCCcEEE
Confidence 3667788999999988 665 333211 011 134332 1223442 11 11222111112 23456789999
Q ss_pred cCCCCCCCC-CCCCc--cHHHHHHHHHHHhc
Q psy893 495 CGSGAHPGG-GVCGA--PGYIAAQMVNRLMR 522 (523)
Q Consensus 495 aG~~~~pg~-g~~~a--sG~~aA~~i~~~~~ 522 (523)
||+.+.... .+.|| ||.+||++|++.++
T Consensus 123 AGe~ts~~~g~~eGAl~SG~raA~~i~~~l~ 153 (181)
T 2e1m_C 123 AGEHVSLKHAWIEGAVETAVRAAIAVNEAPV 153 (181)
T ss_dssp CSGGGTTSTTSHHHHHHHHHHHHHHHHTCCC
T ss_pred EEHHHcCCccCHHHHHHHHHHHHHHHHHHhc
Confidence 999986333 34577 99999999998764
No 133
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=96.64 E-value=0.0011 Score=67.86 Aligned_cols=58 Identities=10% Similarity=0.047 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHHCCcEEEeCceeeEEEECC-CCCeEEEE-e---CC--eEEEcCEEEEcCChHH
Q psy893 230 GAVSQALARSAQASGAQLFTSQTVTEITLDS-DKRASGVV-T---NG--LEIKAKYVLSNTTAKC 287 (523)
Q Consensus 230 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~-~~~~~~v~-~---~g--~~~~ad~vI~a~~~~~ 287 (523)
..+.+.|.+.+++.|++|+++++|++|..++ ++..+.|+ . +| ++++||.||.|++...
T Consensus 166 ~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S 230 (497)
T 2bry_A 166 RQLQLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKF 230 (497)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTC
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCc
Confidence 4677788888888999999999999998742 13334555 2 55 4789999999999775
No 134
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=96.63 E-value=0.0013 Score=65.60 Aligned_cols=62 Identities=13% Similarity=0.183 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHH-CC-cEEEeCceeeEEEECCCCCeEEEE-eC---C--eEEEcCEEEEcCChHHHHHhhCC
Q psy893 230 GAVSQALARSAQA-SG-AQLFTSQTVTEITLDSDKRASGVV-TN---G--LEIKAKYVLSNTTAKCTLLDLIP 294 (523)
Q Consensus 230 ~~l~~~l~~~~~~-~G-~~i~~~~~V~~I~~~~~~~~~~v~-~~---g--~~~~ad~vI~a~~~~~~~~~ll~ 294 (523)
..|.+.|.+.+++ .| ++|+++++|++|.. + ++++ |+ .+ | .+++||.||.|.+.+...++.+.
T Consensus 107 ~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~-~~v~-v~~~~~~~g~~~~~~ad~vV~AdG~~S~vR~~l~ 176 (410)
T 3c96_A 107 GELQMILLAAVRERLGQQAVRTGLGVERIEE-R-DGRV-LIGARDGHGKPQALGADVLVGADGIHSAVRAHLH 176 (410)
T ss_dssp HHHHHHHHHHHHHHHCTTSEEESEEEEEEEE-E-TTEE-EEEEEETTSCEEEEEESEEEECCCTTCHHHHHHC
T ss_pred HHHHHHHHHHHHhhCCCcEEEECCEEEEEec-C-CccE-EEEecCCCCCceEEecCEEEECCCccchhHHHhc
Confidence 3677778888776 36 58999999999988 5 5554 54 43 7 57899999999998876666553
No 135
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=96.61 E-value=0.0012 Score=67.69 Aligned_cols=57 Identities=14% Similarity=0.091 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-eC---Ce--EEEcCEEEEcCChHH
Q psy893 230 GAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-TN---GL--EIKAKYVLSNTTAKC 287 (523)
Q Consensus 230 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~~---g~--~~~ad~vI~a~~~~~ 287 (523)
..+.+.+.+.+++.|+++++++.|.+|...+++.+ .|+ .+ |+ ++.+|.||++++...
T Consensus 225 ~~~~~~l~~~l~~~gv~~~~~~~v~~i~~~~~~~~-~v~~~~~~~g~~~~~~~D~vi~a~G~~p 287 (488)
T 3dgz_A 225 QQMSSLVTEHMESHGTQFLKGCVPSHIKKLPTNQL-QVTWEDHASGKEDTGTFDTVLWAIGRVP 287 (488)
T ss_dssp HHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCE-EEEEEETTTTEEEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcE-EEEEEeCCCCeeEEEECCEEEEcccCCc
Confidence 56788899999999999999999999988542433 354 33 55 478999999988643
No 136
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=96.60 E-value=0.0012 Score=64.77 Aligned_cols=54 Identities=20% Similarity=0.238 Sum_probs=41.7
Q ss_pred HHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-eCCeEEEcCEEEEcCChHH
Q psy893 231 AVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-TNGLEIKAKYVLSNTTAKC 287 (523)
Q Consensus 231 ~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~~g~~~~ad~vI~a~~~~~ 287 (523)
.+.+.+.+.+++.|++++++++|++|..++ +.+ .|. .+| ++.+|+||+|++...
T Consensus 89 ~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~-~~~-~v~~~~g-~~~~d~vVlAtG~~~ 143 (369)
T 3d1c_A 89 TYAEYLQVVANHYELNIFENTVVTNISADD-AYY-TIATTTE-TYHADYIFVATGDYN 143 (369)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEECS-SSE-EEEESSC-CEEEEEEEECCCSTT
T ss_pred HHHHHHHHHHHHcCCeEEeCCEEEEEEECC-CeE-EEEeCCC-EEEeCEEEECCCCCC
Confidence 445556666778899999999999999876 443 466 555 689999999999764
No 137
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=96.59 E-value=0.0014 Score=62.60 Aligned_cols=33 Identities=27% Similarity=0.580 Sum_probs=29.7
Q ss_pred CCChhHHHHHHHHHHcCC-cEEEEccCCCCCccee
Q psy893 1 EAGHNGLVSAAYLARAGL-SVAVLERRHVLGGAAV 34 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~-~V~vlE~~~~~GG~~~ 34 (523)
|||++||+||..|+++|+ +|+|+|++ .+||.+.
T Consensus 8 G~G~aGl~aA~~l~~~g~~~v~lie~~-~~gg~~~ 41 (311)
T 2q0l_A 8 GGGPAGLSAGLYATRGGVKNAVLFEKG-MPGGQIT 41 (311)
T ss_dssp CCSHHHHHHHHHHHHTTCSSEEEECSS-STTCGGG
T ss_pred CccHHHHHHHHHHHHCCCCcEEEEcCC-CCCcccc
Confidence 899999999999999999 99999995 5777653
No 138
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=96.58 E-value=0.0011 Score=67.76 Aligned_cols=58 Identities=10% Similarity=0.062 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-eC---C----eEEEcCEEEEcCChHH
Q psy893 230 GAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-TN---G----LEIKAKYVLSNTTAKC 287 (523)
Q Consensus 230 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~~---g----~~~~ad~vI~a~~~~~ 287 (523)
..+.+.+.+.+++.|++|++++.|++|..++++....|+ .+ | +++.+|.||++++...
T Consensus 228 ~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~p 293 (478)
T 3dk9_A 228 SMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVP 293 (478)
T ss_dssp HHHHHHHHHHHHHTTCEEETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCEEEEeecccc
Confidence 567888899999999999999999999987523123455 43 2 6789999999988643
No 139
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=96.56 E-value=0.0013 Score=67.85 Aligned_cols=58 Identities=12% Similarity=0.085 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHHHCCcEEEeCceeeEEEECCCC--CeEEEE---eCC-e--EEEcCEEEEcCChHH
Q psy893 230 GAVSQALARSAQASGAQLFTSQTVTEITLDSDK--RASGVV---TNG-L--EIKAKYVLSNTTAKC 287 (523)
Q Consensus 230 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~--~~~~v~---~~g-~--~~~ad~vI~a~~~~~ 287 (523)
..+.+.+.+.+++.|++|++++.|++|...+++ ....|+ .+| + ++.+|.||++++...
T Consensus 250 ~~~~~~~~~~l~~~GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D~vi~a~G~~p 315 (519)
T 3qfa_A 250 QDMANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDA 315 (519)
T ss_dssp HHHHHHHHHHHHHTTCEEEESEEEEEEEEEECCTTCEEEEEEEESSSSCEEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCeEEEEEEccCCCCceEEEEEEECCCcEEEEEECCEEEEecCCcc
Confidence 567888889999999999999998888753311 222232 355 2 568999999998653
No 140
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=96.55 E-value=0.0012 Score=70.94 Aligned_cols=35 Identities=26% Similarity=0.390 Sum_probs=33.1
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCCCCcceee
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHVLGGAAVT 35 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~s 35 (523)
|||++||+||..|+++|++|+|+|+++.+||.+..
T Consensus 396 GgGpAGl~aA~~L~~~G~~Vtlie~~~~~GG~~~~ 430 (729)
T 1o94_A 396 GAGPSGSEAARVLMESGYTVHLTDTAEKIGGHLNQ 430 (729)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTHHH
T ss_pred CCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCeeee
Confidence 89999999999999999999999999999998754
No 141
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=96.55 E-value=0.0015 Score=66.39 Aligned_cols=58 Identities=12% Similarity=0.189 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHHHCCcE--EEeCceeeEEEECCCCCeEEEE-eC---C--eEEEcCEEEEcCChHH
Q psy893 230 GAVSQALARSAQASGAQ--LFTSQTVTEITLDSDKRASGVV-TN---G--LEIKAKYVLSNTTAKC 287 (523)
Q Consensus 230 ~~l~~~l~~~~~~~G~~--i~~~~~V~~I~~~~~~~~~~v~-~~---g--~~~~ad~vI~a~~~~~ 287 (523)
..+.+.|.+.+++.|++ |+++++|++|..++++..+.|+ .+ | .++.+|.||+|++...
T Consensus 101 ~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~~~~~d~VVvAtG~~s 166 (464)
T 2xve_A 101 EVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIYSEEFDYVVCCTGHFS 166 (464)
T ss_dssp HHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECCCSSS
T ss_pred HHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCceEEEEcCEEEECCCCCC
Confidence 35566677777777887 9999999999886522234455 33 4 5789999999999643
No 142
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=96.54 E-value=0.0013 Score=63.58 Aligned_cols=33 Identities=30% Similarity=0.372 Sum_probs=28.8
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEcc----CCCCCcce
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLER----RHVLGGAA 33 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~----~~~~GG~~ 33 (523)
|||++||++|..|+++|++|+|+|+ ...+||.+
T Consensus 15 G~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~ 51 (333)
T 1vdc_A 15 GSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQL 51 (333)
T ss_dssp CCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGG
T ss_pred CcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCcee
Confidence 8999999999999999999999998 45556553
No 143
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=96.50 E-value=0.0014 Score=61.83 Aligned_cols=28 Identities=21% Similarity=0.266 Sum_probs=26.5
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHV 28 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~ 28 (523)
|||++||+||..|+++|++|+|+|++..
T Consensus 9 G~G~aGl~aA~~l~~~g~~v~lie~~~~ 36 (297)
T 3fbs_A 9 GGSYAGLSAALQLGRARKNILLVDAGER 36 (297)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEEECCCC
T ss_pred CCCHHHHHHHHHHHhCCCCEEEEeCCCc
Confidence 8999999999999999999999999764
No 144
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=96.50 E-value=0.0013 Score=67.18 Aligned_cols=58 Identities=3% Similarity=0.071 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-eCC-eEEEcCEEEEcCChHH
Q psy893 230 GAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-TNG-LEIKAKYVLSNTTAKC 287 (523)
Q Consensus 230 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~~g-~~~~ad~vI~a~~~~~ 287 (523)
..+.+.+.+.+++.|++|+++++|++|..++++++..|+ .+| +++.+|.||++++...
T Consensus 226 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p 285 (479)
T 2hqm_A 226 ECIQNTITDHYVKEGINVHKLSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGRKS 285 (479)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEECC-CCCEEEEETTSCEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHhCCeEEEeCCEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCCCC
Confidence 467788889999999999999999999876524345577 788 7899999999998643
No 145
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=96.49 E-value=0.0013 Score=67.01 Aligned_cols=56 Identities=16% Similarity=0.185 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEEeCCeEEEcCEEEEcCChHH
Q psy893 230 GAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVVTNGLEIKAKYVLSNTTAKC 287 (523)
Q Consensus 230 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~~~g~~~~ad~vI~a~~~~~ 287 (523)
..+.+.+.+.+++.|++|+++++|++|..++ + ...|+.++.++.+|.||++++...
T Consensus 216 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~-~-~~~v~~~~~~i~aD~Vv~a~G~~p 271 (467)
T 1zk7_A 216 PAIGEAVTAAFRAEGIEVLEHTQASQVAHMD-G-EFVLTTTHGELRADKLLVATGRTP 271 (467)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEEEET-T-EEEEEETTEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEEeC-C-EEEEEECCcEEEcCEEEECCCCCc
Confidence 4688899999999999999999999998764 4 344554566899999999998764
No 146
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=96.47 E-value=0.0014 Score=66.60 Aligned_cols=56 Identities=25% Similarity=0.323 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-e-CC--eEEEcCEEEEcCChHH
Q psy893 230 GAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-T-NG--LEIKAKYVLSNTTAKC 287 (523)
Q Consensus 230 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~-~g--~~~~ad~vI~a~~~~~ 287 (523)
..+.+.+.+.+++.|++++++++|++|..++ +++ .+. . +| +++.+|.||++++...
T Consensus 212 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~-~~~-~v~~~~~g~~~~~~~D~vv~a~G~~p 271 (464)
T 2a8x_A 212 ADVSKEIEKQFKKLGVTILTATKVESIADGG-SQV-TVTVTKDGVAQELKAEKVLQAIGFAP 271 (464)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCEEEEEEECS-SCE-EEEEESSSCEEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHHcCCEEEeCcEEEEEEEcC-CeE-EEEEEcCCceEEEEcCEEEECCCCCc
Confidence 4677888899999999999999999998765 544 355 4 66 6789999999988653
No 147
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=96.45 E-value=0.0013 Score=66.53 Aligned_cols=57 Identities=14% Similarity=0.170 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-eCCeEEEcCEEEEcCChHH
Q psy893 230 GAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-TNGLEIKAKYVLSNTTAKC 287 (523)
Q Consensus 230 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~~g~~~~ad~vI~a~~~~~ 287 (523)
..+.+.+.+.+++.|++++++++|++|..++ ++...|+ .+|+++.+|.||++++...
T Consensus 208 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~-~~~~~v~~~~g~~i~~D~vv~a~G~~p 265 (450)
T 1ges_A 208 PMISETLVEVMNAEGPQLHTNAIPKAVVKNT-DGSLTLELEDGRSETVDCLIWAIGREP 265 (450)
T ss_dssp HHHHHHHHHHHHHHSCEEECSCCEEEEEECT-TSCEEEEETTSCEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeC-CcEEEEEECCCcEEEcCEEEECCCCCc
Confidence 4678888999999999999999999999865 4334566 7888899999999987543
No 148
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=96.44 E-value=0.0013 Score=66.09 Aligned_cols=27 Identities=30% Similarity=0.461 Sum_probs=26.1
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~ 27 (523)
|||++||++|+.|+++|++|+|+||+.
T Consensus 29 GaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 29 GAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 899999999999999999999999976
No 149
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=96.44 E-value=0.0015 Score=62.68 Aligned_cols=57 Identities=16% Similarity=0.161 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-eC----C--eEEEcCEEEEcCChHH
Q psy893 230 GAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-TN----G--LEIKAKYVLSNTTAKC 287 (523)
Q Consensus 230 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~~----g--~~~~ad~vI~a~~~~~ 287 (523)
..+.+.+.+.+++.|++++++++|++|..++ +++.+|+ .+ | +++.+|.||++++...
T Consensus 184 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~-~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~~p 247 (320)
T 1trb_A 184 KILIKRLMDKVENGNIILHTNRTLEEVTGDQ-MGVTGVRLRDTQNSDNIESLDVAGLFVAIGHSP 247 (320)
T ss_dssp HHHHHHHHHHHHTSSEEEECSCEEEEEEECS-SSEEEEEEECCTTCCCCEEEECSEEEECSCEEE
T ss_pred HHHHHHHHHhcccCCeEEEcCceeEEEEcCC-CceEEEEEEeccCCCceEEEEcCEEEEEeCCCC
Confidence 4567778888888999999999999998876 6776677 44 4 4789999999988553
No 150
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=96.43 E-value=0.0015 Score=66.32 Aligned_cols=56 Identities=18% Similarity=0.159 Sum_probs=46.3
Q ss_pred HHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-eCCe-EEEcCEEEEcCChHH
Q psy893 230 GAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-TNGL-EIKAKYVLSNTTAKC 287 (523)
Q Consensus 230 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~~g~-~~~ad~vI~a~~~~~ 287 (523)
..+.+.+.+.+++.|++++++++|++|..++ ++ ..|+ .+|+ ++.+|.||++++...
T Consensus 207 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~-~~-~~v~~~~G~~~i~~D~vv~a~G~~p 264 (463)
T 2r9z_A 207 PLLSATLAENMHAQGIETHLEFAVAALERDA-QG-TTLVAQDGTRLEGFDSVIWAVGRAP 264 (463)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCEEEEEEET-TE-EEEEETTCCEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeC-Ce-EEEEEeCCcEEEEcCEEEECCCCCc
Confidence 4677888899999999999999999998765 43 4566 7888 899999999988643
No 151
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.42 E-value=0.0014 Score=66.47 Aligned_cols=54 Identities=19% Similarity=0.170 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-eCC--eEEEcCEEEEcCChHH
Q psy893 230 GAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-TNG--LEIKAKYVLSNTTAKC 287 (523)
Q Consensus 230 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~~g--~~~~ad~vI~a~~~~~ 287 (523)
..+.+.+.+.+++.|++++++++|++|.. + + +.++ .+| +++.+|.||++++...
T Consensus 212 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~-~-~--v~v~~~~G~~~~i~~D~vv~a~G~~p 268 (458)
T 1lvl_A 212 SELTAPVAESLKKLGIALHLGHSVEGYEN-G-C--LLANDGKGGQLRLEADRVLVAVGRRP 268 (458)
T ss_dssp HHHHHHHHHHHHHHTCEEETTCEEEEEET-T-E--EEEECSSSCCCEECCSCEEECCCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEECCEEEEEEe-C-C--EEEEECCCceEEEECCEEEECcCCCc
Confidence 46778888999999999999999999986 4 4 3344 456 5899999999998654
No 152
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.39 E-value=0.0017 Score=65.89 Aligned_cols=56 Identities=14% Similarity=0.195 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-e---CCeEEEcCEEEEcCChHH
Q psy893 230 GAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-T---NGLEIKAKYVLSNTTAKC 287 (523)
Q Consensus 230 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~---~g~~~~ad~vI~a~~~~~ 287 (523)
..+.+.+.+.+++.|++++++++|++|..++ +++ .++ . +++++.+|.||++++...
T Consensus 211 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~-~~~-~v~~~~~g~~~~~~~D~vv~a~G~~p 270 (455)
T 1ebd_A 211 KQMAAIIKKRLKKKGVEVVTNALAKGAEERE-DGV-TVTYEANGETKTIDADYVLVTVGRRP 270 (455)
T ss_dssp HHHHHHHHHHHHHTTCEEEESEEEEEEEEET-TEE-EEEEEETTEEEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeC-CeE-EEEEEeCCceeEEEcCEEEECcCCCc
Confidence 4677888899999999999999999998765 443 344 3 456799999999998664
No 153
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=96.39 E-value=0.0012 Score=67.79 Aligned_cols=56 Identities=18% Similarity=0.213 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-eCCeEEEcCEEEEcCChHH
Q psy893 230 GAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-TNGLEIKAKYVLSNTTAKC 287 (523)
Q Consensus 230 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~~g~~~~ad~vI~a~~~~~ 287 (523)
..+.+.+.+.+++.|++|+++++|++|..++ +++ .|+ .+|+++.+|.||++++...
T Consensus 223 ~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~-~~v-~v~~~~g~~i~aD~Vv~a~G~~p 279 (499)
T 1xdi_A 223 ADAALVLEESFAERGVRLFKNARAASVTRTG-AGV-LVTMTDGRTVEGSHALMTIGSVP 279 (499)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEEECS-SSE-EEEETTSCEEEESEEEECCCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeC-CEE-EEEECCCcEEEcCEEEECCCCCc
Confidence 3678889999999999999999999999876 554 466 6788899999999998764
No 154
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=96.38 E-value=0.0022 Score=66.66 Aligned_cols=59 Identities=15% Similarity=0.214 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-eC---C--eEEEcCEEEEcCChHHHHHhhCC
Q psy893 231 AVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-TN---G--LEIKAKYVLSNTTAKCTLLDLIP 294 (523)
Q Consensus 231 ~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~~---g--~~~~ad~vI~a~~~~~~~~~ll~ 294 (523)
.+-+.|.+.+++. |+++++|++|..++ ++++ |+ .+ | .+++||.||.|.+.+...++.+.
T Consensus 139 ~l~~~L~~~a~~~---v~~~~~v~~~~~~~-~~v~-v~~~~~~~G~~~~i~a~~vVgADG~~S~vR~~lg 203 (549)
T 2r0c_A 139 WLAPLLAEAVGER---LRTRSRLDSFEQRD-DHVR-ATITDLRTGATRAVHARYLVACDGASSPTRKALG 203 (549)
T ss_dssp HHHHHHHHHHGGG---EECSEEEEEEEECS-SCEE-EEEEETTTCCEEEEEEEEEEECCCTTCHHHHHHT
T ss_pred HHHHHHHHHHHHh---cccCcEEEEEEEeC-CEEE-EEEEECCCCCEEEEEeCEEEECCCCCcHHHHHcC
Confidence 5666777777765 99999999999887 6654 44 33 6 47899999999998876666653
No 155
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=96.36 E-value=0.0017 Score=66.42 Aligned_cols=57 Identities=18% Similarity=0.219 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-eCCeEEEcCEEEEcCChHH
Q psy893 230 GAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-TNGLEIKAKYVLSNTTAKC 287 (523)
Q Consensus 230 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~~g~~~~ad~vI~a~~~~~ 287 (523)
..+.+.+.+.+++.|++|+++++|++|..++ ++...|+ .+|+++.+|.||++++...
T Consensus 231 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~-~~~~~v~~~~G~~i~~D~vv~a~G~~p 288 (490)
T 1fec_A 231 SELRKQLTEQLRANGINVRTHENPAKVTKNA-DGTRHVVFESGAEADYDVVMLAIGRVP 288 (490)
T ss_dssp HHHHHHHHHHHHHTTEEEEETCCEEEEEECT-TSCEEEEETTSCEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcC-CCEEEEEECCCcEEEcCEEEEccCCCc
Confidence 4678889999999999999999999999875 4434567 7888899999999998654
No 156
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=96.31 E-value=0.0022 Score=65.46 Aligned_cols=56 Identities=18% Similarity=0.103 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-eCCe-----EEEcCEEEEcCChH
Q psy893 230 GAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-TNGL-----EIKAKYVLSNTTAK 286 (523)
Q Consensus 230 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~~g~-----~~~ad~vI~a~~~~ 286 (523)
..+.+.+.+.+++.|++|++++.|.+|..++++.+ .|+ .+++ ++.+|.||++++..
T Consensus 227 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~-~v~~~~~~~~~~~~~~~D~vi~a~G~~ 288 (483)
T 3dgh_A 227 QQMAELVAASMEERGIPFLRKTVPLSVEKQDDGKL-LVKYKNVETGEESEDVYDTVLWAIGRK 288 (483)
T ss_dssp HHHHHHHHHHHHHTTCCEEETEEEEEEEECTTSCE-EEEEEETTTCCEEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCcE-EEEEecCCCCceeEEEcCEEEECcccc
Confidence 46788889999999999999999999998652443 455 4432 78999999998864
No 157
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=96.30 E-value=0.0018 Score=62.64 Aligned_cols=33 Identities=39% Similarity=0.570 Sum_probs=29.6
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCCCCccee
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHVLGGAAV 34 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~ 34 (523)
|||++||+||..|++.|++|+|+|+. .+||.+.
T Consensus 21 G~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~ 53 (335)
T 2a87_A 21 GSGPAGYTAALYAARAQLAPLVFEGT-SFGGALM 53 (335)
T ss_dssp CCHHHHHHHHHHHHHTTCCCEEECCS-SCSCGGG
T ss_pred CCCHHHHHHHHHHHhCCCeEEEEecC-CCCCcee
Confidence 89999999999999999999999976 6777653
No 158
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=96.30 E-value=0.002 Score=65.42 Aligned_cols=55 Identities=18% Similarity=0.160 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-e-C--Ce--EEEcCEEEEcCChH
Q psy893 230 GAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-T-N--GL--EIKAKYVLSNTTAK 286 (523)
Q Consensus 230 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~-~--g~--~~~ad~vI~a~~~~ 286 (523)
..+.+.+.+.+++.|++++++++|++|..++ +++ .|+ . + |+ ++.+|.||++++..
T Consensus 210 ~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~-~~~-~v~~~~~~~g~~~~i~~D~vv~a~G~~ 270 (464)
T 2eq6_A 210 PETAALLRRALEKEGIRVRTKTKAVGYEKKK-DGL-HVRLEPAEGGEGEEVVVDKVLVAVGRK 270 (464)
T ss_dssp HHHHHHHHHHHHHTTCEEECSEEEEEEEEET-TEE-EEEEEETTCCSCEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHHhcCCEEEcCCEEEEEEEeC-CEE-EEEEeecCCCceeEEEcCEEEECCCcc
Confidence 4677888899999999999999999998765 443 355 4 6 76 89999999998754
No 159
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=96.27 E-value=0.0026 Score=66.95 Aligned_cols=47 Identities=17% Similarity=0.162 Sum_probs=37.3
Q ss_pred CCcEEEeCceeeEEEECCC-CCeEEEE-e---CCe--EEEcCEEEEcCChHHHH
Q psy893 243 SGAQLFTSQTVTEITLDSD-KRASGVV-T---NGL--EIKAKYVLSNTTAKCTL 289 (523)
Q Consensus 243 ~G~~i~~~~~V~~I~~~~~-~~~~~v~-~---~g~--~~~ad~vI~a~~~~~~~ 289 (523)
.|++|++++.|++|..+++ +++++|+ . +|+ ++.||.||++++.....
T Consensus 273 ~nv~v~~~~~V~~i~~~~~~~~v~GV~~~~~~~g~~~~i~A~~VIlaaG~~~s~ 326 (623)
T 3pl8_A 273 ERFNLFPAVACERVVRNALNSEIESLHIHDLISGDRFEIKADVYVLTAGAVHNT 326 (623)
T ss_dssp EEEEEECSEEEEEEEECTTSSCEEEEEEEETTTCCEEEECEEEEEECSCTTHHH
T ss_pred CCEEEEeCCEEEEEEEECCCCEEEEEEEEEcCCCcEEEEECCEEEEcCCCcCCH
Confidence 4799999999999998752 3788888 4 354 67899999999987653
No 160
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=96.25 E-value=0.0023 Score=58.27 Aligned_cols=55 Identities=20% Similarity=0.187 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHHC-CcEEEeCceeeEEEECCCCCeEEEE-eCCeEEEcCEEEEcCChHH
Q psy893 231 AVSQALARSAQAS-GAQLFTSQTVTEITLDSDKRASGVV-TNGLEIKAKYVLSNTTAKC 287 (523)
Q Consensus 231 ~l~~~l~~~~~~~-G~~i~~~~~V~~I~~~~~~~~~~v~-~~g~~~~ad~vI~a~~~~~ 287 (523)
.+.+.|.+.+++. |++++ +++|++|..++ +++++|+ .+|++++||.||.|++.+.
T Consensus 69 ~~~~~l~~~~~~~~gv~i~-~~~v~~i~~~~-~~v~~v~~~~g~~i~a~~VV~A~G~~s 125 (232)
T 2cul_A 69 AFHARAKYLLEGLRPLHLF-QATATGLLLEG-NRVVGVRTWEGPPARGEKVVLAVGSFL 125 (232)
T ss_dssp HHHHHHHHHHHTCTTEEEE-ECCEEEEEEET-TEEEEEEETTSCCEECSEEEECCTTCS
T ss_pred HHHHHHHHHHHcCCCcEEE-EeEEEEEEEeC-CEEEEEEECCCCEEECCEEEECCCCCh
Confidence 4556677778786 89998 67999999877 7777777 7787899999999998743
No 161
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.22 E-value=0.0023 Score=65.73 Aligned_cols=57 Identities=16% Similarity=0.114 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-eCCeE-EEcCEEEEcCChHH
Q psy893 230 GAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-TNGLE-IKAKYVLSNTTAKC 287 (523)
Q Consensus 230 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~~g~~-~~ad~vI~a~~~~~ 287 (523)
..+.+.+.+.+++.|++++++++|++|..++ ++...|+ .+|++ +.+|.||++++...
T Consensus 217 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~-~~~~~v~~~~g~~~~~~D~vi~a~G~~p 275 (500)
T 1onf_A 217 ESVINVLENDMKKNNINIVTFADVVEIKKVS-DKNLSIHLSDGRIYEHFDHVIYCVGRSP 275 (500)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEESS-TTCEEEEETTSCEEEEESEEEECCCBCC
T ss_pred hhhHHHHHHHHHhCCCEEEECCEEEEEEEcC-CceEEEEECCCcEEEECCEEEECCCCCc
Confidence 4678889999999999999999999998765 3334566 77877 99999999998654
No 162
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=96.20 E-value=0.002 Score=65.98 Aligned_cols=57 Identities=12% Similarity=0.290 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-eCCeEEEcCEEEEcCChHH
Q psy893 230 GAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-TNGLEIKAKYVLSNTTAKC 287 (523)
Q Consensus 230 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~~g~~~~ad~vI~a~~~~~ 287 (523)
..+.+.+.+.+++.|++|+++++|++|..++ ++...|+ .+|+++.+|.||++++...
T Consensus 235 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~-~~~~~v~~~~G~~i~~D~vv~a~G~~p 292 (495)
T 2wpf_A 235 ETIREEVTKQLTANGIEIMTNENPAKVSLNT-DGSKHVTFESGKTLDVDVVMMAIGRIP 292 (495)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEECT-TSCEEEEETTSCEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcC-CceEEEEECCCcEEEcCEEEECCCCcc
Confidence 4678888999999999999999999999875 4444577 7888899999999998653
No 163
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=96.20 E-value=0.0028 Score=70.88 Aligned_cols=34 Identities=29% Similarity=0.643 Sum_probs=32.0
Q ss_pred CCChhHHHHHHHHHHcCC-cEEEEccCCCCCccee
Q psy893 1 EAGHNGLVSAAYLARAGL-SVAVLERRHVLGGAAV 34 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~-~V~vlE~~~~~GG~~~ 34 (523)
|||++||+||..|+++|+ +|+|+|+.+.+||...
T Consensus 194 GgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG~~~ 228 (1025)
T 1gte_A 194 GAGPASISCASFLARLGYSDITIFEKQEYVGGLST 228 (1025)
T ss_dssp CCSHHHHHHHHHHHHTTCCCEEEEESSSSCSTHHH
T ss_pred CccHHHHHHHHHHHhcCCCcEEEEeCCCCCCcccc
Confidence 899999999999999999 7999999999999763
No 164
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=96.17 E-value=0.0036 Score=60.79 Aligned_cols=34 Identities=32% Similarity=0.257 Sum_probs=30.5
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCCCCccee
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHVLGGAAV 34 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~ 34 (523)
|||++|+.||+.|+++|++|+|+|++...+.-.+
T Consensus 8 GgG~AG~~AA~~la~~G~~V~liE~~~~~~tp~h 41 (443)
T 3g5s_A 8 GAGLAGSEAAWTLLRLGVPVRLFEMRPKRMTPAH 41 (443)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEECCTTTSCCSSC
T ss_pred CchHHHHHHHHHHHHCCCcEEEEeccCCcCCccc
Confidence 8999999999999999999999999987665544
No 165
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=96.14 E-value=0.0031 Score=69.99 Aligned_cols=34 Identities=35% Similarity=0.544 Sum_probs=32.8
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCCCCccee
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHVLGGAAV 34 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~ 34 (523)
|||++||+||..|++.|++|+|+|+++.+||.+.
T Consensus 135 GaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~ 168 (965)
T 2gag_A 135 GAGPAGLAAAREASRSGARVMLLDERAEAGGTLL 168 (965)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGG
T ss_pred CCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceec
Confidence 8999999999999999999999999999999886
No 166
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=96.10 E-value=0.003 Score=67.31 Aligned_cols=34 Identities=29% Similarity=0.388 Sum_probs=32.3
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCCCCccee
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHVLGGAAV 34 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~ 34 (523)
|||++||+||..|++.|++|+|+|+++.+||...
T Consensus 380 GgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~~~ 413 (671)
T 1ps9_A 380 GAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFN 413 (671)
T ss_dssp CCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTHH
T ss_pred CCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCeee
Confidence 8999999999999999999999999999999864
No 167
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=96.01 E-value=0.003 Score=64.61 Aligned_cols=47 Identities=13% Similarity=0.189 Sum_probs=39.5
Q ss_pred HHHHHCCcEEEeCceeeEEEECCCCCeEEEE-eCCeEEEcCEEEEcCChH
Q psy893 238 RSAQASGAQLFTSQTVTEITLDSDKRASGVV-TNGLEIKAKYVLSNTTAK 286 (523)
Q Consensus 238 ~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~~g~~~~ad~vI~a~~~~ 286 (523)
+.++++|++|++++.|++|..+ +++..|+ .+|+++.+|.||++++..
T Consensus 265 ~~l~~~GV~v~~~~~v~~i~~~--~~v~~v~~~~g~~i~aD~Vv~a~G~~ 312 (493)
T 1y56_A 265 QELERWGIDYVHIPNVKRVEGN--EKVERVIDMNNHEYKVDALIFADGRR 312 (493)
T ss_dssp HHHHHHTCEEEECSSEEEEECS--SSCCEEEETTCCEEECSEEEECCCEE
T ss_pred HHHHhCCcEEEeCCeeEEEecC--CceEEEEeCCCeEEEeCEEEECCCcC
Confidence 6677889999999999999865 4456677 778899999999999865
No 168
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=96.00 E-value=0.0046 Score=53.63 Aligned_cols=53 Identities=21% Similarity=0.113 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-eCCeEEEcCEEEEcCChHH
Q psy893 231 AVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-TNGLEIKAKYVLSNTTAKC 287 (523)
Q Consensus 231 ~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~~g~~~~ad~vI~a~~~~~ 287 (523)
.+.+.+.+.+++.|++++++ +|++|..++ +. +.|+ .+| ++.+|.||+|++...
T Consensus 57 ~~~~~l~~~~~~~gv~v~~~-~v~~i~~~~-~~-~~v~~~~g-~i~ad~vI~A~G~~~ 110 (180)
T 2ywl_A 57 ELLRRLEAHARRYGAEVRPG-VVKGVRDMG-GV-FEVETEEG-VEKAERLLLCTHKDP 110 (180)
T ss_dssp HHHHHHHHHHHHTTCEEEEC-CCCEEEECS-SS-EEEECSSC-EEEEEEEEECCTTCC
T ss_pred HHHHHHHHHHHHcCCEEEeC-EEEEEEEcC-CE-EEEEECCC-EEEECEEEECCCCCC
Confidence 34455666677889999999 999999876 54 3566 677 899999999998764
No 169
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=95.98 E-value=0.0043 Score=64.31 Aligned_cols=57 Identities=18% Similarity=0.261 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-eCCeEEEcCEEEEcCChHH
Q psy893 230 GAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-TNGLEIKAKYVLSNTTAKC 287 (523)
Q Consensus 230 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~~g~~~~ad~vI~a~~~~~ 287 (523)
..+.+.|.+.+++.|++++.+ +|++|..++++.++.|+ .+|++++||.||.|.+.+.
T Consensus 165 ~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~s 222 (538)
T 2aqj_A 165 HLVADFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMRG 222 (538)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGGC
T ss_pred HHHHHHHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCch
Confidence 578888999999999999999 89999986535566777 7787899999999999875
No 170
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=95.91 E-value=0.0045 Score=58.88 Aligned_cols=31 Identities=29% Similarity=0.562 Sum_probs=27.9
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCCCCcce
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHVLGGAA 33 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~ 33 (523)
|||++||+||..|+++|++|+|+|+ .+||.+
T Consensus 8 G~G~aGl~aA~~l~~~g~~v~li~~--~~gG~~ 38 (310)
T 1fl2_A 8 GSGPAGAAAAIYSARKGIRTGLMGE--RFGGQI 38 (310)
T ss_dssp CCSHHHHHHHHHHHTTTCCEEEECS--STTGGG
T ss_pred CcCHHHHHHHHHHHHCCCcEEEEeC--CCCcee
Confidence 8999999999999999999999986 467764
No 171
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=95.89 E-value=0.0044 Score=62.67 Aligned_cols=56 Identities=11% Similarity=0.033 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-eCCeEEEcCEEEEcCChHH
Q psy893 229 MGAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-TNGLEIKAKYVLSNTTAKC 287 (523)
Q Consensus 229 ~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~~g~~~~ad~vI~a~~~~~ 287 (523)
...+.+.+.+.+++.|++|+++++|++|..++ +++ .|+ .+| ++.+|.||++++...
T Consensus 188 d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~-~~v-~v~~~~g-~i~aD~Vv~A~G~~p 244 (452)
T 3oc4_A 188 DKEMVAEVQKSLEKQAVIFHFEETVLGIEETA-NGI-VLETSEQ-EISCDSGIFALNLHP 244 (452)
T ss_dssp CHHHHHHHHHHHHTTTEEEEETCCEEEEEECS-SCE-EEEESSC-EEEESEEEECSCCBC
T ss_pred CHHHHHHHHHHHHHcCCEEEeCCEEEEEEccC-CeE-EEEECCC-EEEeCEEEECcCCCC
Confidence 35778889999999999999999999999766 666 566 555 899999999998653
No 172
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=95.74 E-value=0.0046 Score=62.71 Aligned_cols=30 Identities=20% Similarity=0.225 Sum_probs=28.9
Q ss_pred CCChhHHHHHHHHHHcC-----CcEEEEccCCCCC
Q psy893 1 EAGHNGLVSAAYLARAG-----LSVAVLERRHVLG 30 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G-----~~V~vlE~~~~~G 30 (523)
|||++||+||..|++.| .+|+|+|+++.+|
T Consensus 37 GaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g 71 (463)
T 3s5w_A 37 GFGPSNIALAIALQERAQAQGALEVLFLDKQGDYR 71 (463)
T ss_dssp CCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCC
T ss_pred CCCHHHHHHHHHHHhcccccCcccEEEEecCCCCC
Confidence 89999999999999999 9999999999887
No 173
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=95.73 E-value=0.0049 Score=65.27 Aligned_cols=65 Identities=17% Similarity=0.251 Sum_probs=50.9
Q ss_pred HHHHHHHHHHHHHCCc--EEEeCceeeEEEECCC--CCeEEEE-e------CC--eEEEcCEEEEcCChHHHHHhhCC
Q psy893 230 GAVSQALARSAQASGA--QLFTSQTVTEITLDSD--KRASGVV-T------NG--LEIKAKYVLSNTTAKCTLLDLIP 294 (523)
Q Consensus 230 ~~l~~~l~~~~~~~G~--~i~~~~~V~~I~~~~~--~~~~~v~-~------~g--~~~~ad~vI~a~~~~~~~~~ll~ 294 (523)
..+.+.|.+.+++.|+ +|+++++|++|..+++ +..+.|+ . +| ++++||.||.|.+.+...++++.
T Consensus 141 ~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~~~G~~~~i~a~~vVgADG~~S~vR~~lg 218 (639)
T 2dkh_A 141 ARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLERCDAAHAGQIETVQARYVVGCDGARSNVRRAIG 218 (639)
T ss_dssp HHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECSGGGTTCEEEEEEEEEEECCCTTCHHHHHTT
T ss_pred HHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEEeccccCCCCeEEEEeCEEEECCCcchHHHHHhC
Confidence 4677888999999987 9999999999998752 1223455 3 46 57899999999999877777775
No 174
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=95.71 E-value=0.0038 Score=64.24 Aligned_cols=57 Identities=23% Similarity=0.217 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-eCCeEEEcCEEEEcCChHH
Q psy893 230 GAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-TNGLEIKAKYVLSNTTAKC 287 (523)
Q Consensus 230 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~~g~~~~ad~vI~a~~~~~ 287 (523)
..+.+.|.+.+++.|++++.+ +|++|..++++.+++|+ .+|++++||.||.|.+.+.
T Consensus 173 ~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S 230 (511)
T 2weu_A 173 DEVARYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGFRG 230 (511)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECCGGGC
T ss_pred HHHHHHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCcch
Confidence 478888999999999999999 99999986536667787 7787899999999999875
No 175
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=95.68 E-value=0.0049 Score=62.70 Aligned_cols=56 Identities=16% Similarity=0.217 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-eCCeEEEcCEEEEcCChH
Q psy893 229 MGAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-TNGLEIKAKYVLSNTTAK 286 (523)
Q Consensus 229 ~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~~g~~~~ad~vI~a~~~~ 286 (523)
...+.+.+.+.+++.|++|+++++|++|..++ +++. |+ .+|+++.+|.||++++..
T Consensus 201 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~-~~v~-v~~~~g~~i~aD~Vv~a~G~~ 257 (472)
T 3iwa_A 201 SKSLSQMLRHDLEKNDVVVHTGEKVVRLEGEN-GKVA-RVITDKRTLDADLVILAAGVS 257 (472)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEESS-SBEE-EEEESSCEEECSEEEECSCEE
T ss_pred CHHHHHHHHHHHHhcCCEEEeCCEEEEEEccC-CeEE-EEEeCCCEEEcCEEEECCCCC
Confidence 45788899999999999999999999999866 6654 66 888899999999999864
No 176
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=95.68 E-value=0.0047 Score=62.44 Aligned_cols=34 Identities=26% Similarity=0.293 Sum_probs=31.8
Q ss_pred CCChhHHHHHHHHHH-c------CCcEEEEccCCCCCccee
Q psy893 1 EAGHNGLVSAAYLAR-A------GLSVAVLERRHVLGGAAV 34 (523)
Q Consensus 1 GaG~~GL~aA~~La~-~------G~~V~vlE~~~~~GG~~~ 34 (523)
|||++||+||..|++ . |++|+|+|+.+.+||.+.
T Consensus 10 G~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~~ 50 (456)
T 1lqt_A 10 GSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVR 50 (456)
T ss_dssp CCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHHH
T ss_pred CcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCccc
Confidence 899999999999999 7 999999999999998764
No 177
>2e1m_B L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=95.63 E-value=0.014 Score=47.35 Aligned_cols=52 Identities=10% Similarity=0.049 Sum_probs=43.4
Q ss_pred eEEEcCEEEEcCChHHHHHhhCCCCCCCHHHHHHHhcCCCCCCeEEEEEecCCC
Q psy893 272 LEIKAKYVLSNTTAKCTLLDLIPKGNLDERTTQAVQSIDYASPVTKINVALKSI 325 (523)
Q Consensus 272 ~~~~ad~vI~a~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 325 (523)
++++||+||+|+|+..+ ..+...+.+|+...+.++++.+. +..++++.++++
T Consensus 4 ~~~~Ad~VIvTvP~~vL-~~I~F~P~LP~~k~~Ai~~l~~g-~~~Kv~l~f~~~ 55 (130)
T 2e1m_B 4 QTWTGDLAIVTIPFSSL-RFVKVTPPFSYKKRRAVIETHYD-QATKVLLEFSRR 55 (130)
T ss_dssp EEEEESEEEECSCHHHH-TTSEEESCCCHHHHHHHHHCCEE-CEEEEEEEESSC
T ss_pred eEEEcCEEEEcCCHHHH-hcCcCCCCCCHHHHHHHHhCCCc-ceeEEEEEECCC
Confidence 47899999999999985 56654556999999999999876 789999999864
No 178
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=95.62 E-value=0.0066 Score=61.45 Aligned_cols=34 Identities=24% Similarity=0.275 Sum_probs=31.8
Q ss_pred CCChhHHHHHHHHHHcC--CcEEEEccCCCCCccee
Q psy893 1 EAGHNGLVSAAYLARAG--LSVAVLERRHVLGGAAV 34 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G--~~V~vlE~~~~~GG~~~ 34 (523)
|||++|++||..|++.| ++|+|+|+.+.+||+.+
T Consensus 13 G~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~~~ 48 (460)
T 1cjc_A 13 GSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLVR 48 (460)
T ss_dssp CCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHHH
T ss_pred CcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCceee
Confidence 89999999999999998 99999999999998763
No 179
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=95.61 E-value=0.0061 Score=62.95 Aligned_cols=58 Identities=19% Similarity=0.221 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHHH-CCcEEEeCceeeEEEECCCCCeEEEE-eCCeEEEcCEEEEcCChHHH
Q psy893 230 GAVSQALARSAQA-SGAQLFTSQTVTEITLDSDKRASGVV-TNGLEIKAKYVLSNTTAKCT 288 (523)
Q Consensus 230 ~~l~~~l~~~~~~-~G~~i~~~~~V~~I~~~~~~~~~~v~-~~g~~~~ad~vI~a~~~~~~ 288 (523)
..+.+.|.+.+++ .|++++.+ .|++|..++++.++.|+ .+|++++||.||.|.+.+..
T Consensus 175 ~~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~S~ 234 (526)
T 2pyx_A 175 AKFSQLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAKSL 234 (526)
T ss_dssp HHHHHHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGGCC
T ss_pred HHHHHHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcchH
Confidence 4678889999988 89999999 59999887535556677 67778999999999998753
No 180
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=95.60 E-value=0.007 Score=62.83 Aligned_cols=57 Identities=18% Similarity=0.208 Sum_probs=48.8
Q ss_pred HHHHHHHHHHHHHC-CcEEEeCceeeEEEECCCCCeEEEE-eCCeEEEcCEEEEcCChHH
Q psy893 230 GAVSQALARSAQAS-GAQLFTSQTVTEITLDSDKRASGVV-TNGLEIKAKYVLSNTTAKC 287 (523)
Q Consensus 230 ~~l~~~l~~~~~~~-G~~i~~~~~V~~I~~~~~~~~~~v~-~~g~~~~ad~vI~a~~~~~ 287 (523)
..+.+.|.+.+++. |++++++ +|++|..++++.+++|+ .+|+++.||.||.|.+.+.
T Consensus 194 ~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~~S 252 (550)
T 2e4g_A 194 HLVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTATGRVFDADLFVDCSGFRG 252 (550)
T ss_dssp HHHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETTSCEEECSEEEECCGGGC
T ss_pred HHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCCch
Confidence 46888999999998 9999999 99999986536666777 7788899999999999875
No 181
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=95.59 E-value=0.0052 Score=61.66 Aligned_cols=51 Identities=16% Similarity=0.206 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEEeC----CeEEEcCEEEEcCC
Q psy893 229 MGAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVVTN----GLEIKAKYVLSNTT 284 (523)
Q Consensus 229 ~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~~~----g~~~~ad~vI~a~~ 284 (523)
...+.+.+.+.+++.|++++++++|++|..+ ++ .+ .+ ++++.+|.||++.+
T Consensus 199 ~~~~~~~l~~~l~~~GV~i~~~~~v~~v~~~---~v-~~-~~~~~~g~~i~~D~vv~a~G 253 (430)
T 3h28_A 199 IGASKRLVEDLFAERNIDWIANVAVKAIEPD---KV-IY-EDLNGNTHEVPAKFTMFMPS 253 (430)
T ss_dssp STTHHHHHHHHHHHTTCEEECSCEEEEECSS---EE-EE-ECTTSCEEEEECSEEEEECE
T ss_pred chHHHHHHHHHHHHCCCEEEeCCEEEEEeCC---eE-EE-EecCCCceEEeeeEEEECCC
Confidence 3456778888999999999999999999632 22 22 33 67899999998854
No 182
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=95.58 E-value=0.0071 Score=63.95 Aligned_cols=56 Identities=16% Similarity=0.219 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHHC--CcEEEeCceeeEEEECCCC---CeEEEE-e---CCe--EEEcCEEEEcCChHH
Q psy893 231 AVSQALARSAQAS--GAQLFTSQTVTEITLDSDK---RASGVV-T---NGL--EIKAKYVLSNTTAKC 287 (523)
Q Consensus 231 ~l~~~l~~~~~~~--G~~i~~~~~V~~I~~~~~~---~~~~v~-~---~g~--~~~ad~vI~a~~~~~ 287 (523)
.+...|.+.+++. |++|+.++.|.+|..++ + ++++|. . +|+ .+.|+.||+|++-..
T Consensus 167 ~i~~~L~~~a~~~~~gV~i~~~~~v~dLi~~~-~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVLATGG~g 233 (662)
T 3gyx_A 167 SYKVIVAEAAKNALGQDRIIERIFIVKLLLDK-NTPNRIAGAVGFNLRANEVHIFKANAMVVACGGAV 233 (662)
T ss_dssp SHHHHHHHHHHHHHCTTTEECSEEECCCEECS-SSTTBEEEEEEEESSSSCEEEEECSEEEECCCCBC
T ss_pred HHHHHHHHHHHhcCCCcEEEEceEEEEEEEeC-CccceEEEEEEEEcCCCcEEEEEeCEEEECCCccc
Confidence 5677888888887 99999999999999987 5 888886 2 453 589999999998654
No 183
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=95.56 E-value=0.007 Score=63.14 Aligned_cols=56 Identities=21% Similarity=0.217 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHHHC-CcEEEeCceeeEEEECCCCCeEEEE-eCCeEEEcCEEEEcCChHH
Q psy893 230 GAVSQALARSAQAS-GAQLFTSQTVTEITLDSDKRASGVV-TNGLEIKAKYVLSNTTAKC 287 (523)
Q Consensus 230 ~~l~~~l~~~~~~~-G~~i~~~~~V~~I~~~~~~~~~~v~-~~g~~~~ad~vI~a~~~~~ 287 (523)
..+...|.+.+++. |++|+ +..|+.|..++ +++.+|. .+|+++.||.||+|++.+.
T Consensus 117 ~~l~~~L~~~l~~~~GV~I~-~~~V~~L~~d~-g~V~GV~t~~G~~i~Ad~VVLATG~~s 174 (641)
T 3cp8_A 117 TQYSLYMRRIVEHEPNIDLL-QDTVIGVSANS-GKFSSVTVRSGRAIQAKAAILACGTFL 174 (641)
T ss_dssp HHHHHHHHHHHHTCTTEEEE-ECCEEEEEEET-TEEEEEEETTSCEEEEEEEEECCTTCB
T ss_pred HHHHHHHHHHHHhCCCCEEE-eeEEEEEEecC-CEEEEEEECCCcEEEeCEEEECcCCCC
Confidence 35677888888874 89985 56999998887 7888888 7888999999999999763
No 184
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=95.49 E-value=0.0074 Score=63.39 Aligned_cols=58 Identities=10% Similarity=0.035 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHHHCCcEEEeCceeeEEEEC-----CC---CCeE-EEE-eCCeEEE--cCEEEEcCChHH
Q psy893 230 GAVSQALARSAQASGAQLFTSQTVTEITLD-----SD---KRAS-GVV-TNGLEIK--AKYVLSNTTAKC 287 (523)
Q Consensus 230 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~-----~~---~~~~-~v~-~~g~~~~--ad~vI~a~~~~~ 287 (523)
..+.+.+.+.+++.|+++++++.|.+|... .+ +++. .+. .+|+++. +|.||++++...
T Consensus 326 ~~~~~~~~~~l~~~gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~D~vi~a~G~~p 395 (598)
T 2x8g_A 326 QQMAEKVGDYMENHGVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKKFEEEFETVIFAVGREP 395 (598)
T ss_dssp HHHHHHHHHHHHHTTCEEEETEEEEEEEEEECCBTTTTBCCEEEEEEEETTSCEEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHhCCCEEEECCeEEEEEeccccccccCCCceEEEEEEeCCCcEEeccCCEEEEEeCCcc
Confidence 467788888899999999999988888642 11 2221 222 4676555 999999998653
No 185
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=95.49 E-value=0.0068 Score=62.48 Aligned_cols=60 Identities=12% Similarity=-0.029 Sum_probs=49.2
Q ss_pred CCCHHHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-eCCeEEEcCEEEEcCChHH
Q psy893 226 EGGMGAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-TNGLEIKAKYVLSNTTAKC 287 (523)
Q Consensus 226 ~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~~g~~~~ad~vI~a~~~~~ 287 (523)
.+--..+++.+.+.+++.|+++++++.|.++...+ +++ .|. .+++++.+|.|++|++-..
T Consensus 259 ~~~D~ei~~~l~~~l~~~gi~~~~~~~v~~~~~~~-~~~-~v~~~~~~~~~~D~vLvAvGR~P 319 (542)
T 4b1b_A 259 RGFDQQCAVKVKLYMEEQGVMFKNGILPKKLTKMD-DKI-LVEFSDKTSELYDTVLYAIGRKG 319 (542)
T ss_dssp TTSCHHHHHHHHHHHHHTTCEEEETCCEEEEEEET-TEE-EEEETTSCEEEESEEEECSCEEE
T ss_pred cccchhHHHHHHHHHHhhcceeecceEEEEEEecC-CeE-EEEEcCCCeEEEEEEEEcccccC
Confidence 33345788999999999999999999999999876 554 355 6777889999999998653
No 186
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=95.47 E-value=0.0087 Score=61.66 Aligned_cols=49 Identities=16% Similarity=0.229 Sum_probs=34.7
Q ss_pred HHHHHCCcEEEeCceeeEEEECCC-CCeEEEE-eCCeEEEcCEEEEcCChH
Q psy893 238 RSAQASGAQLFTSQTVTEITLDSD-KRASGVV-TNGLEIKAKYVLSNTTAK 286 (523)
Q Consensus 238 ~~~~~~G~~i~~~~~V~~I~~~~~-~~~~~v~-~~g~~~~ad~vI~a~~~~ 286 (523)
+.+++.|++++.+++|+.|..+.+ +..+.|. .+|+++.+|+||+|++..
T Consensus 275 ~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~ 325 (521)
T 1hyu_A 275 AHVSDYDVDVIDSQSASKLVPAATEGGLHQIETASGAVLKARSIIIATGAK 325 (521)
T ss_dssp HHHHTSCEEEECSCCEEEEECCSSTTSCEEEEETTSCEEEEEEEEECCCEE
T ss_pred HHHHHcCCEEEcCCEEEEEEeccCCCceEEEEECCCCEEEcCEEEECCCCC
Confidence 334456788999999999975421 2234566 677788999999998865
No 187
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=95.42 E-value=0.0087 Score=60.42 Aligned_cols=54 Identities=26% Similarity=0.258 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEEeCCeEEEcCEEEEcCChH
Q psy893 230 GAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVVTNGLEIKAKYVLSNTTAK 286 (523)
Q Consensus 230 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~~~g~~~~ad~vI~a~~~~ 286 (523)
..+.+.+.+.+++. +++++++.|.+|..++ ++..+..+|+++.+|.||++++..
T Consensus 190 ~~~~~~l~~~l~~~-v~i~~~~~v~~i~~~~--~v~~v~~~g~~i~~D~Vv~a~G~~ 243 (449)
T 3kd9_A 190 KEVTDILEEKLKKH-VNLRLQEITMKIEGEE--RVEKVVTDAGEYKAELVILATGIK 243 (449)
T ss_dssp HHHHHHHHHHHTTT-SEEEESCCEEEEECSS--SCCEEEETTEEEECSEEEECSCEE
T ss_pred HHHHHHHHHHHHhC-cEEEeCCeEEEEeccC--cEEEEEeCCCEEECCEEEEeeCCc
Confidence 46778888888888 9999999999998653 444455778899999999998854
No 188
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=95.40 E-value=0.0054 Score=61.10 Aligned_cols=51 Identities=20% Similarity=0.186 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-eCCeEEEcCEEEEcCChH
Q psy893 230 GAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-TNGLEIKAKYVLSNTTAK 286 (523)
Q Consensus 230 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~~g~~~~ad~vI~a~~~~ 286 (523)
..+.+.+.+.+++.|++++++++|++|..+ +|+ .+|+++.+|.||++++..
T Consensus 218 ~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~------~v~~~~g~~~~~D~vi~a~G~~ 269 (409)
T 3h8l_A 218 PNSRKAVASIYNQLGIKLVHNFKIKEIREH------EIVDEKGNTIPADITILLPPYT 269 (409)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEECSS------EEEETTSCEEECSEEEEECCEE
T ss_pred HHHHHHHHHHHHHCCCEEEcCCceEEECCC------eEEECCCCEEeeeEEEECCCCC
Confidence 578888999999999999999999999632 256 788899999999998753
No 189
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=95.39 E-value=0.01 Score=61.74 Aligned_cols=46 Identities=13% Similarity=0.173 Sum_probs=37.4
Q ss_pred HCCcEEEeCceeeEEEEC--CCCCeEEEE-e--CCe--EEEcC-EEEEcCChHHH
Q psy893 242 ASGAQLFTSQTVTEITLD--SDKRASGVV-T--NGL--EIKAK-YVLSNTTAKCT 288 (523)
Q Consensus 242 ~~G~~i~~~~~V~~I~~~--~~~~~~~v~-~--~g~--~~~ad-~vI~a~~~~~~ 288 (523)
+.+.+|++++.|++|..+ + +++++|+ . +|+ ++.|+ .||++++...+
T Consensus 218 r~Nl~v~~~a~v~ri~~~~~~-~~a~GV~~~~~~g~~~~v~A~keVILsaGa~~s 271 (577)
T 3q9t_A 218 KPNITIVPEVHSKRLIINEAD-RTCKGVTVVTAAGNELNFFADREVILSQGVFET 271 (577)
T ss_dssp CTTEEEECSEEEEEEEEETTT-TEEEEEEEEETTSCEEEEEEEEEEEECSHHHHH
T ss_pred CCCeEEEcCcEEEEEEEeCCC-CEEEEEEEEeCCCcEEEEEeeeEEEEcccccCC
Confidence 458999999999999998 6 8899998 3 364 46774 59999998765
No 190
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=95.33 E-value=0.0089 Score=62.64 Aligned_cols=54 Identities=9% Similarity=0.091 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-eCCeEEEcCEEEEcCChH
Q psy893 229 MGAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-TNGLEIKAKYVLSNTTAK 286 (523)
Q Consensus 229 ~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~~g~~~~ad~vI~a~~~~ 286 (523)
...+.+.+.+.+++.|++|+++++|++|..++ + +|+ .+|+++.+|.||++++..
T Consensus 227 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~-~---~v~~~~g~~i~~D~Vi~a~G~~ 281 (588)
T 3ics_A 227 DYEMAAYVHEHMKNHDVELVFEDGVDALEENG-A---VVRLKSGSVIQTDMLILAIGVQ 281 (588)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEGGG-T---EEEETTSCEEECSEEEECSCEE
T ss_pred CHHHHHHHHHHHHHcCCEEEECCeEEEEecCC-C---EEEECCCCEEEcCEEEEccCCC
Confidence 35678889999999999999999999998754 3 366 788899999999999854
No 191
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=95.26 E-value=0.012 Score=62.59 Aligned_cols=29 Identities=31% Similarity=0.544 Sum_probs=27.1
Q ss_pred CCChhHHHHHHHHHH-----cCCcEEEEccCCCC
Q psy893 1 EAGHNGLVSAAYLAR-----AGLSVAVLERRHVL 29 (523)
Q Consensus 1 GaG~~GL~aA~~La~-----~G~~V~vlE~~~~~ 29 (523)
|||++||++|..|++ .|.+|+|+||++.+
T Consensus 15 GaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~ 48 (665)
T 1pn0_A 15 GAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTK 48 (665)
T ss_dssp CCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSC
T ss_pred CcCHHHHHHHHHHhccccccCCCCEEEEeCCCCC
Confidence 899999999999999 99999999998654
No 192
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=95.21 E-value=0.011 Score=59.69 Aligned_cols=58 Identities=17% Similarity=0.155 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEEeCCeEEEcCEEEEcCChHH
Q psy893 229 MGAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVVTNGLEIKAKYVLSNTTAKC 287 (523)
Q Consensus 229 ~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~~~g~~~~ad~vI~a~~~~~ 287 (523)
...+.+.+.+.+++.|++|+++++|++|..++ +++..|..+|+++.+|.||++++...
T Consensus 190 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~-~~v~~v~~~g~~i~~D~vv~a~G~~p 247 (452)
T 2cdu_A 190 DKEFTDILAKDYEAHGVNLVLGSKVAAFEEVD-DEIITKTLDGKEIKSDIAILCIGFRP 247 (452)
T ss_dssp CHHHHHHHHHHHHHTTCEEEESSCEEEEEEET-TEEEEEETTSCEEEESEEEECCCEEE
T ss_pred hhhHHHHHHHHHHHCCCEEEcCCeeEEEEcCC-CeEEEEEeCCCEEECCEEEECcCCCC
Confidence 35678889999999999999999999998755 66655556677899999999998654
No 193
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=95.07 E-value=0.032 Score=50.54 Aligned_cols=27 Identities=33% Similarity=0.530 Sum_probs=25.8
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~ 27 (523)
|||++||+||..|++.|.+|+|+|++.
T Consensus 10 GgG~aGl~aA~~la~~g~~v~lie~~~ 36 (232)
T 2cul_A 10 GAGFSGAETAFWLAQKGVRVGLLTQSL 36 (232)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred CcCHHHHHHHHHHHHCCCCEEEEecCC
Confidence 899999999999999999999999973
No 194
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=95.04 E-value=0.012 Score=59.19 Aligned_cols=56 Identities=21% Similarity=0.221 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEEeCCeEEEcCEEEEcCChHH
Q psy893 230 GAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVVTNGLEIKAKYVLSNTTAKC 287 (523)
Q Consensus 230 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~~~g~~~~ad~vI~a~~~~~ 287 (523)
..+.+.+.+.+++.|++|+++++|++|..+ +++..|..+|+++.+|.||++++...
T Consensus 191 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~--~~v~~v~~~~~~i~~d~vi~a~G~~p 246 (447)
T 1nhp_A 191 KEFTDVLTEEMEANNITIATGETVERYEGD--GRVQKVVTDKNAYDADLVVVAVGVRP 246 (447)
T ss_dssp HHHHHHHHHHHHTTTEEEEESCCEEEEECS--SBCCEEEESSCEEECSEEEECSCEEE
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEcc--CcEEEEEECCCEEECCEEEECcCCCC
Confidence 467788899999999999999999999865 44444555667899999999998654
No 195
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=94.96 E-value=0.013 Score=60.91 Aligned_cols=56 Identities=9% Similarity=0.208 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHHHCCcEEEeCceeeEEEEC------------------CCCCeEEEE-eCCeEEEcCEEEEcCChH
Q psy893 230 GAVSQALARSAQASGAQLFTSQTVTEITLD------------------SDKRASGVV-TNGLEIKAKYVLSNTTAK 286 (523)
Q Consensus 230 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~------------------~~~~~~~v~-~~g~~~~ad~vI~a~~~~ 286 (523)
..+.+.+.+.+++.|+++++++.|++|..+ .++++ .++ .+|+++.+|.||++++..
T Consensus 192 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~g~~i~~D~vi~a~G~~ 266 (565)
T 3ntd_A 192 REMAGFAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHL-SLTLSNGELLETDLLIMAIGVR 266 (565)
T ss_dssp HHHHHHHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEE-EEEETTSCEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCeEEEEeccccccccccccccccccccCCCcE-EEEEcCCCEEEcCEEEECcCCc
Confidence 467788889999999999999999999873 21444 355 778899999999998854
No 196
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=94.93 E-value=0.017 Score=57.51 Aligned_cols=55 Identities=16% Similarity=0.116 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-eCCeEEEcCEEEEcCChH
Q psy893 230 GAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-TNGLEIKAKYVLSNTTAK 286 (523)
Q Consensus 230 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~~g~~~~ad~vI~a~~~~ 286 (523)
..+.+.+.+.+++.|++|++++.|++|..+ +++.+|+ .+|+++.||.||++++..
T Consensus 185 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~--~~~~~v~~~dg~~i~aD~Vv~a~G~~ 240 (410)
T 3ef6_A 185 RRIGAWLRGLLTELGVQVELGTGVVGFSGE--GQLEQVMASDGRSFVADSALICVGAE 240 (410)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEECS--SSCCEEEETTSCEEECSEEEECSCEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEecc--CcEEEEEECCCCEEEcCEEEEeeCCe
Confidence 467788889999999999999999999875 4556788 789999999999999865
No 197
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=94.89 E-value=0.017 Score=59.83 Aligned_cols=55 Identities=20% Similarity=0.164 Sum_probs=42.5
Q ss_pred HHHHHHHHHH-CCcEEEeCceeeEEEECCCCCeEEEE-eC---Ce--EE---EcCEEEEcCChHHH
Q psy893 233 SQALARSAQA-SGAQLFTSQTVTEITLDSDKRASGVV-TN---GL--EI---KAKYVLSNTTAKCT 288 (523)
Q Consensus 233 ~~~l~~~~~~-~G~~i~~~~~V~~I~~~~~~~~~~v~-~~---g~--~~---~ad~vI~a~~~~~~ 288 (523)
..++.+.+.+ .|++|++++.|++|..++ +++++|+ .+ |+ ++ .++.||+|++...+
T Consensus 198 ~~~~l~~~~~~~~~~i~~~~~V~~i~~~~-~~~~gV~~~~~~~g~~~~~~v~~~~~VIlaaG~~~s 262 (546)
T 1kdg_A 198 VATYLQTALARPNFTFKTNVMVSNVVRNG-SQILGVQTNDPTLGPNGFIPVTPKGRVILSAGAFGT 262 (546)
T ss_dssp HHTHHHHHHTCTTEEEECSCCEEEEEEET-TEEEEEEESCTTSSGGGEEEEEEEEEEEECSHHHHH
T ss_pred HHHHHHHHhhCCCcEEEeCCEEEEEEEeC-CEEEEEEEEecCCCceeEEEEEeCCEEEEcCChhcC
Confidence 3445555555 489999999999999987 8899998 43 64 33 78899999999765
No 198
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=94.87 E-value=0.016 Score=58.99 Aligned_cols=56 Identities=21% Similarity=0.276 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEEeCCeEEEcCEEEEcCChHH
Q psy893 230 GAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVVTNGLEIKAKYVLSNTTAKC 287 (523)
Q Consensus 230 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~~~g~~~~ad~vI~a~~~~~ 287 (523)
..+.+.+.+.+++.|++|+++++|++|..+ +++..|..++.++.+|.||++++...
T Consensus 227 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~--~~v~~v~~~~~~i~~D~vi~a~G~~p 282 (480)
T 3cgb_A 227 GDMAEYIYKEADKHHIEILTNENVKAFKGN--ERVEAVETDKGTYKADLVLVSVGVKP 282 (480)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEES--SBEEEEEETTEEEECSEEEECSCEEE
T ss_pred HHHHHHHHHHHHHcCcEEEcCCEEEEEEcC--CcEEEEEECCCEEEcCEEEECcCCCc
Confidence 467788899999999999999999999864 44555665566899999999998654
No 199
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=94.86 E-value=0.058 Score=53.96 Aligned_cols=56 Identities=18% Similarity=0.299 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHHHCCcEEEeCceeeEEEE--CCCCCeEEEE-eCCeEEEcCEEEEcCChH
Q psy893 230 GAVSQALARSAQASGAQLFTSQTVTEITL--DSDKRASGVV-TNGLEIKAKYVLSNTTAK 286 (523)
Q Consensus 230 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~--~~~~~~~~v~-~~g~~~~ad~vI~a~~~~ 286 (523)
..+.+.+.+.+++.|++++++++|++|.. ++ +++..|+ .+|+++.+|.||++++..
T Consensus 191 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~-~~v~~v~~~~G~~i~~D~Vv~a~G~~ 249 (431)
T 1q1r_A 191 PPVSAFYEHLHREAGVDIRTGTQVCGFEMSTDQ-QKVTAVLCEDGTRLPADLVIAGIGLI 249 (431)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEECTTT-CCEEEEEETTSCEEECSEEEECCCEE
T ss_pred HHHHHHHHHHHHhCCeEEEeCCEEEEEEeccCC-CcEEEEEeCCCCEEEcCEEEECCCCC
Confidence 46778888999999999999999999997 55 6776787 788899999999998854
No 200
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=94.83 E-value=0.069 Score=54.13 Aligned_cols=30 Identities=17% Similarity=0.171 Sum_probs=25.4
Q ss_pred CCChhHHHHHHHHHHc--CCcEEEEccCCCCC
Q psy893 1 EAGHNGLVSAAYLARA--GLSVAVLERRHVLG 30 (523)
Q Consensus 1 GaG~~GL~aA~~La~~--G~~V~vlE~~~~~G 30 (523)
|||++||+||..|+++ |++|+|+|+++.++
T Consensus 10 GaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~ 41 (472)
T 3iwa_A 10 GAVALGPKAACRFKRLDPEAHVTMIDQASRIS 41 (472)
T ss_dssp CCSSHHHHHHHHHHHHCTTSEEEEECCC----
T ss_pred CCCHHHHHHHHHHHhhCcCCCEEEEECCCccc
Confidence 8999999999999998 99999999998865
No 201
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=94.78 E-value=0.014 Score=57.03 Aligned_cols=50 Identities=18% Similarity=0.363 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-eCCeEEEcCEEEEcCChH
Q psy893 230 GAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-TNGLEIKAKYVLSNTTAK 286 (523)
Q Consensus 230 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~~g~~~~ad~vI~a~~~~ 286 (523)
..+.+.+.+.+++.|++++++++|++|. . . +|+ .+|+ +.+|.||++++..
T Consensus 183 ~~~~~~l~~~l~~~gV~i~~~~~v~~i~--~-~---~v~~~~g~-i~~D~vi~a~G~~ 233 (367)
T 1xhc_A 183 EELSNMIKDMLEETGVKFFLNSELLEAN--E-E---GVLTNSGF-IEGKVKICAIGIV 233 (367)
T ss_dssp HHHHHHHHHHHHHTTEEEECSCCEEEEC--S-S---EEEETTEE-EECSCEEEECCEE
T ss_pred HHHHHHHHHHHHHCCCEEEcCCEEEEEE--e-e---EEEECCCE-EEcCEEEECcCCC
Confidence 4677888899999999999999999997 2 2 356 6777 9999999998754
No 202
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=94.75 E-value=0.018 Score=59.74 Aligned_cols=48 Identities=31% Similarity=0.344 Sum_probs=38.6
Q ss_pred HHHCCcEEEeCceeeEEEEC----CCCCeEEEE-e--CCe--EEEcC-EEEEcCChHHH
Q psy893 240 AQASGAQLFTSQTVTEITLD----SDKRASGVV-T--NGL--EIKAK-YVLSNTTAKCT 288 (523)
Q Consensus 240 ~~~~G~~i~~~~~V~~I~~~----~~~~~~~v~-~--~g~--~~~ad-~vI~a~~~~~~ 288 (523)
+.+.+.+|++++.|++|..+ + ++++||+ . +|+ ++.|+ .||++++...+
T Consensus 237 ~~r~NL~V~t~a~V~rIl~d~~~~~-~ra~GV~~~~~~G~~~~v~A~kEVILsAGa~~S 294 (583)
T 3qvp_A 237 YQRPNLQVLTGQYVGKVLLSQNGTT-PRAVGVEFGTHKGNTHNVYAKHEVLLAAGSAVS 294 (583)
T ss_dssp TTCTTEEEECSCEEEEEEEECSSSS-CEEEEEEEESSTTCEEEEEEEEEEEECSCTTTH
T ss_pred hcCCCcEEEcCCEEEEEEeccCCCC-CEEEEEEEEecCCcEEEEEECCEEEEeCCccCC
Confidence 34568999999999999997 5 8899998 4 464 56786 59999998765
No 203
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=94.65 E-value=0.063 Score=54.05 Aligned_cols=31 Identities=13% Similarity=0.085 Sum_probs=28.5
Q ss_pred CCChhHHHHHHHHHHc--CCcEEEEccCCCCCc
Q psy893 1 EAGHNGLVSAAYLARA--GLSVAVLERRHVLGG 31 (523)
Q Consensus 1 GaG~~GL~aA~~La~~--G~~V~vlE~~~~~GG 31 (523)
|||++|++||..|++. |++|+|+|+++.++.
T Consensus 7 GgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~~ 39 (452)
T 2cdu_A 7 GCTHAGTFAVKQTIADHPDADVTAYEMNDNISF 39 (452)
T ss_dssp CCSHHHHHHHHHHHHHCTTCEEEEEESSSCCCB
T ss_pred CCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCc
Confidence 8999999999999998 999999999987653
No 204
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=94.59 E-value=0.081 Score=45.54 Aligned_cols=27 Identities=48% Similarity=0.719 Sum_probs=26.0
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~ 27 (523)
|||++|+.+|..|++.|.+|+|+|+.+
T Consensus 8 GgG~~Gl~~A~~l~~~g~~v~lie~~~ 34 (180)
T 2ywl_A 8 GGGPSGLSAALFLARAGLKVLVLDGGR 34 (180)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred CCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 899999999999999999999999976
No 205
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=94.58 E-value=0.083 Score=54.11 Aligned_cols=28 Identities=29% Similarity=0.544 Sum_probs=24.7
Q ss_pred CCChhHHHHHHHHHH---cCCcEEEEccCCC
Q psy893 1 EAGHNGLVSAAYLAR---AGLSVAVLERRHV 28 (523)
Q Consensus 1 GaG~~GL~aA~~La~---~G~~V~vlE~~~~ 28 (523)
|||++|+++|+.|++ +|++|+|+|+.+.
T Consensus 9 GgG~aGl~~A~~La~~~~~G~~V~lvE~~~~ 39 (511)
T 2weu_A 9 GGGTAGWMTASYLKAAFDDRIDVTLVESGNV 39 (511)
T ss_dssp CCHHHHHHHHHHHHHHHGGGSEEEEEEC---
T ss_pred CCCHHHHHHHHHHHhhcCCCCEEEEEecCCC
Confidence 899999999999999 9999999999764
No 206
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=94.56 E-value=0.07 Score=55.23 Aligned_cols=28 Identities=21% Similarity=0.533 Sum_probs=26.3
Q ss_pred CCChhHHHHHHHHHH---cCCcEEEEccCCC
Q psy893 1 EAGHNGLVSAAYLAR---AGLSVAVLERRHV 28 (523)
Q Consensus 1 GaG~~GL~aA~~La~---~G~~V~vlE~~~~ 28 (523)
|||++|++||+.|++ .|.+|+|+|+.+.
T Consensus 32 GgG~aGl~aA~~La~~~~~G~~V~liE~~~~ 62 (550)
T 2e4g_A 32 GGGTAGWMAASYLGKALQGTADITLLQAPDI 62 (550)
T ss_dssp CCSHHHHHHHHHHHHHTTTSSEEEEEECCCC
T ss_pred CCCHHHHHHHHHHHhhcCCCCcEEEEeCCCC
Confidence 899999999999999 9999999999653
No 207
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=94.52 E-value=0.081 Score=53.96 Aligned_cols=34 Identities=38% Similarity=0.457 Sum_probs=30.1
Q ss_pred CCChhHHHHHHHHHH-cCCcEEEEc--------cCCCCCccee
Q psy893 1 EAGHNGLVSAAYLAR-AGLSVAVLE--------RRHVLGGAAV 34 (523)
Q Consensus 1 GaG~~GL~aA~~La~-~G~~V~vlE--------~~~~~GG~~~ 34 (523)
|||++|++||..|++ .|++|+|+| +.+.+||.|.
T Consensus 14 GgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~~~ 56 (495)
T 2wpf_A 14 GAGSGGLEAGWNAATLYGKRVAVVDVQTSHGPPFYAALGGTCV 56 (495)
T ss_dssp CCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBCBTTHHHH
T ss_pred CCChhHHHHHHHHHHhcCCeEEEEecccccccccCCCCCCeee
Confidence 899999999999999 999999999 3566788664
No 208
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=94.52 E-value=0.059 Score=53.51 Aligned_cols=31 Identities=19% Similarity=0.313 Sum_probs=28.5
Q ss_pred CCChhHHHHHHHHHHcCCc--EEEEccCCCCCc
Q psy893 1 EAGHNGLVSAAYLARAGLS--VAVLERRHVLGG 31 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~--V~vlE~~~~~GG 31 (523)
|||++||+||..|+++|++ |+|+|+.+.++.
T Consensus 9 GaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~y 41 (410)
T 3ef6_A 9 GNGVGGFTTAQALRAEGFEGRISLIGDEPHLPY 41 (410)
T ss_dssp CCSHHHHHHHHHHHHTTCCSEEEEEECSSSSSB
T ss_pred cccHHHHHHHHHHHccCcCCeEEEEECCCCCCc
Confidence 8999999999999999988 999999987653
No 209
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=94.47 E-value=0.079 Score=53.99 Aligned_cols=34 Identities=35% Similarity=0.442 Sum_probs=30.4
Q ss_pred CCChhHHHHHHHHHH-cCCcEEEEc--------cCCCCCccee
Q psy893 1 EAGHNGLVSAAYLAR-AGLSVAVLE--------RRHVLGGAAV 34 (523)
Q Consensus 1 GaG~~GL~aA~~La~-~G~~V~vlE--------~~~~~GG~~~ 34 (523)
|||++|++||++|++ .|++|+|+| +...+||.|.
T Consensus 10 GgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~c~ 52 (490)
T 1fec_A 10 GAGSGGLEAGWNAASLHKKRVAVIDLQKHHGPPHYAALGGTCV 52 (490)
T ss_dssp CCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBSCTTCHHH
T ss_pred CCCHHHHHHHHHHHHHcCCEEEEEecccccccccCCCcCcccc
Confidence 899999999999999 999999999 3567888764
No 210
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=94.44 E-value=0.12 Score=49.07 Aligned_cols=33 Identities=30% Similarity=0.449 Sum_probs=29.8
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCCCCccee
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHVLGGAAV 34 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~ 34 (523)
|||++||+||..|+++|++|+|+|+. .+||.+.
T Consensus 12 G~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~ 44 (320)
T 1trb_A 12 GSGPAGYTAAVYAARANLQPVLITGM-EKGGQLT 44 (320)
T ss_dssp CCSHHHHHHHHHHHTTTCCCEEECCS-STTGGGG
T ss_pred CcCHHHHHHHHHHHHCCCcEEEEccC-CCCceEe
Confidence 89999999999999999999999975 6788654
No 211
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=94.30 E-value=0.027 Score=55.93 Aligned_cols=51 Identities=24% Similarity=0.265 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-eCCeEEEcCEEEEcCChH
Q psy893 230 GAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-TNGLEIKAKYVLSNTTAK 286 (523)
Q Consensus 230 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~~g~~~~ad~vI~a~~~~ 286 (523)
..+.+.+.+.+++.|++|+++++|++|. + + .|+ .+|+++.+|.||++++..
T Consensus 187 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~--~-~---~v~~~~g~~i~~D~vi~a~G~~ 238 (408)
T 2gqw_A 187 ATLADFVARYHAAQGVDLRFERSVTGSV--D-G---VVLLDDGTRIAADMVVVGIGVL 238 (408)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEE--T-T---EEEETTSCEEECSEEEECSCEE
T ss_pred HHHHHHHHHHHHHcCcEEEeCCEEEEEE--C-C---EEEECCCCEEEcCEEEECcCCC
Confidence 4677888899999999999999999998 4 4 466 788899999999998854
No 212
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=94.30 E-value=0.03 Score=56.13 Aligned_cols=30 Identities=20% Similarity=0.282 Sum_probs=27.2
Q ss_pred CCChhHHHHHHHHHHcCC--cEEEEccCCCCC
Q psy893 1 EAGHNGLVSAAYLARAGL--SVAVLERRHVLG 30 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~--~V~vlE~~~~~G 30 (523)
|||++||+||..|++.|+ +|+|+|+.+.++
T Consensus 11 GgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~ 42 (431)
T 1q1r_A 11 GTGLAGVEVAFGLRASGWEGNIRLVGDATVIP 42 (431)
T ss_dssp CCSHHHHHHHHHHHHTTCCSEEEEECSCCSCC
T ss_pred cCHHHHHHHHHHHHccCcCCCEEEEECCCCCC
Confidence 899999999999999998 799999987643
No 213
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=94.30 E-value=0.02 Score=58.40 Aligned_cols=56 Identities=18% Similarity=0.255 Sum_probs=46.3
Q ss_pred HHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEEeCCeEEEcCEEEEcCChHH
Q psy893 230 GAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVVTNGLEIKAKYVLSNTTAKC 287 (523)
Q Consensus 230 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~~~g~~~~ad~vI~a~~~~~ 287 (523)
..+.+.+.+.+++.|++|+++++|++|.. + +++..|..+|+++.+|.||++++...
T Consensus 236 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~-~-~~v~~v~~~g~~i~~D~Vi~a~G~~p 291 (490)
T 2bc0_A 236 RDLTDLMAKNMEEHGIQLAFGETVKEVAG-N-GKVEKIITDKNEYDVDMVILAVGFRP 291 (490)
T ss_dssp HHHHHHHHHHHHTTTCEEEETCCEEEEEC-S-SSCCEEEESSCEEECSEEEECCCEEE
T ss_pred HHHHHHHHHHHHhCCeEEEeCCEEEEEEc-C-CcEEEEEECCcEEECCEEEECCCCCc
Confidence 46788889999999999999999999986 3 55555556777899999999998653
No 214
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=94.26 E-value=0.023 Score=57.07 Aligned_cols=51 Identities=16% Similarity=0.286 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE---eC-----CeEEEcCEEEEcCC
Q psy893 230 GAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV---TN-----GLEIKAKYVLSNTT 284 (523)
Q Consensus 230 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~---~~-----g~~~~ad~vI~a~~ 284 (523)
..+.+.+.+.+++.|++++++++|++|..+ +++ +. .+ ++++.+|.||++.+
T Consensus 208 ~~~~~~~~~~l~~~gI~~~~~~~v~~v~~~---~v~-~~~~~~~g~~~~~~~i~~D~vv~~~g 266 (437)
T 3sx6_A 208 GDSKGILTKGLKEEGIEAYTNCKVTKVEDN---KMY-VTQVDEKGETIKEMVLPVKFGMMIPA 266 (437)
T ss_dssp TTHHHHHHHHHHHTTCEEECSEEEEEEETT---EEE-EEEECTTSCEEEEEEEECSEEEEECC
T ss_pred hHHHHHHHHHHHHCCCEEEcCCEEEEEECC---eEE-EEecccCCccccceEEEEeEEEEcCC
Confidence 346677888899999999999999999642 221 22 23 56789999998864
No 215
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=94.20 E-value=0.018 Score=59.39 Aligned_cols=53 Identities=19% Similarity=0.258 Sum_probs=39.9
Q ss_pred HHHHHHHCCcEEEeCceeeEEEECCC--CCeEEEE-e--CCe--EE---EcCEEEEcCChHHH
Q psy893 236 LARSAQASGAQLFTSQTVTEITLDSD--KRASGVV-T--NGL--EI---KAKYVLSNTTAKCT 288 (523)
Q Consensus 236 l~~~~~~~G~~i~~~~~V~~I~~~~~--~~~~~v~-~--~g~--~~---~ad~vI~a~~~~~~ 288 (523)
+.+.+++.|++|++++.|++|..+++ +++++|+ . +|+ ++ .++.||+|++...+
T Consensus 200 ~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~GV~~~~~~g~~~~~~v~a~k~VILaaGa~~s 262 (536)
T 1ju2_A 200 LLNKGNSNNLRVGVHASVEKIIFSNAPGLTATGVIYRDSNGTPHQAFVRSKGEVIVSAGTIGT 262 (536)
T ss_dssp GGGGSCTTTEEEEESCEEEEEEECCSSSCBEEEEEEECTTSCEEEEEEEEEEEEEECCHHHHH
T ss_pred hhhhhcCCCcEEEeCCEEEEEEECCCCCCEEEEEEEEeCCCceEEEEeccCCEEEEcCcccCC
Confidence 33334567899999999999999762 3788998 4 465 34 46789999998765
No 216
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=94.20 E-value=0.094 Score=53.89 Aligned_cols=34 Identities=29% Similarity=0.486 Sum_probs=32.0
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCCCCccee
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHVLGGAAV 34 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~ 34 (523)
|||++|++||..|++.|++|+|+|+++.+||.|.
T Consensus 50 GgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~ 83 (523)
T 1mo9_A 50 GGGAAGRFGSAYLRAMGGRQLIVDRWPFLGGSCP 83 (523)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEEESSSSSSCHHH
T ss_pred CCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCccc
Confidence 8999999999999999999999999988898764
No 217
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=94.16 E-value=0.026 Score=55.53 Aligned_cols=44 Identities=18% Similarity=0.240 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEEeCCeEEEcCEEEEcCChHH
Q psy893 230 GAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVVTNGLEIKAKYVLSNTTAKC 287 (523)
Q Consensus 230 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~~~g~~~~ad~vI~a~~~~~ 287 (523)
..+.+.+.+.+++.|+++++++.|++| |+++.+|.||++++...
T Consensus 188 ~~~~~~~~~~l~~~gV~~~~~~~v~~i--------------g~~~~~D~vv~a~G~~p 231 (385)
T 3klj_A 188 RDGGLFLKDKLDRLGIKIYTNSNFEEM--------------GDLIRSSCVITAVGVKP 231 (385)
T ss_dssp HHHHHHHHHHHHTTTCEEECSCCGGGC--------------HHHHHHSEEEECCCEEE
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEc--------------CeEEecCeEEECcCccc
Confidence 467778888898999999999999877 23568999999988654
No 218
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=94.12 E-value=0.03 Score=56.15 Aligned_cols=52 Identities=6% Similarity=0.082 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-eCCeEEEcCEEEEcCChHH
Q psy893 230 GAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-TNGLEIKAKYVLSNTTAKC 287 (523)
Q Consensus 230 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~~g~~~~ad~vI~a~~~~~ 287 (523)
..+.+.+.+.+++.|+++++++.|+++.. . .|. .+|+++.+|.||++++...
T Consensus 188 ~~~~~~~~~~l~~~gV~i~~~~~v~~~~~---~---~v~~~~g~~~~~D~vl~a~G~~P 240 (437)
T 4eqs_A 188 ADMNQPILDELDKREIPYRLNEEINAING---N---EITFKSGKVEHYDMIIEGVGTHP 240 (437)
T ss_dssp GGGGHHHHHHHHHTTCCEEESCCEEEEET---T---EEEETTSCEEECSEEEECCCEEE
T ss_pred chhHHHHHHHhhccceEEEeccEEEEecC---C---eeeecCCeEEeeeeEEEEeceec
Confidence 45677888899999999999999998863 2 255 7888999999999988543
No 219
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=94.12 E-value=0.09 Score=53.44 Aligned_cols=33 Identities=30% Similarity=0.468 Sum_probs=30.7
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCCCCccee
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHVLGGAAV 34 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~ 34 (523)
|||++||+||+.|+++|++|+|+|| +.+||.|.
T Consensus 33 GgG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~ 65 (484)
T 3o0h_A 33 GSGSGGVRAARLAGALGKRVAIAEE-YRIGGTCV 65 (484)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEEES-SCTTHHHH
T ss_pred CcCHHHHHHHHHHHhCcCEEEEEeC-CCCCCcee
Confidence 8999999999999999999999999 67888764
No 220
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=94.04 E-value=0.031 Score=55.41 Aligned_cols=32 Identities=28% Similarity=0.369 Sum_probs=29.0
Q ss_pred CCChhHHHHHHHHHHc--CCcEEEEccCCCCCcc
Q psy893 1 EAGHNGLVSAAYLARA--GLSVAVLERRHVLGGA 32 (523)
Q Consensus 1 GaG~~GL~aA~~La~~--G~~V~vlE~~~~~GG~ 32 (523)
|||++||++|+.|+++ |++|+|+|++...+|.
T Consensus 43 GaGi~Gls~A~~La~~~pG~~V~vlE~~~~~~~~ 76 (405)
T 3c4n_A 43 GAGRMGAACAFYLRQLAPGRSLLLVEEGGLPNEE 76 (405)
T ss_dssp CCSHHHHHHHHHHHHHCTTSCEEEECSSCSSCTT
T ss_pred CCcHHHHHHHHHHHhcCCCCeEEEEeCCCCCCcc
Confidence 8999999999999999 9999999998765554
No 221
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=93.99 E-value=0.11 Score=53.08 Aligned_cols=33 Identities=33% Similarity=0.445 Sum_probs=31.0
Q ss_pred CCChhHHHHHHHHHHc---CCcEEEEccCCCCCccee
Q psy893 1 EAGHNGLVSAAYLARA---GLSVAVLERRHVLGGAAV 34 (523)
Q Consensus 1 GaG~~GL~aA~~La~~---G~~V~vlE~~~~~GG~~~ 34 (523)
|||++|++||+.|++. |++|+|+|+++ +||.+.
T Consensus 9 GgG~aGl~aA~~l~~~~~~G~~V~liE~~~-~GG~~~ 44 (499)
T 1xdi_A 9 GGGPAGYEAALVAATSHPETTQVTVIDCDG-IGGAAV 44 (499)
T ss_dssp CCSHHHHHHHHHHHHHCTTTEEEEEEESSC-TTHHHH
T ss_pred CCCHHHHHHHHHHHhCCCCcCEEEEEeCCC-cCCccc
Confidence 8999999999999999 99999999998 899764
No 222
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=93.94 E-value=0.12 Score=52.53 Aligned_cols=33 Identities=33% Similarity=0.520 Sum_probs=30.6
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCCCCccee
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHVLGGAAV 34 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~ 34 (523)
|||++|++||..|++.|++|+|+|++ .+||.|.
T Consensus 18 GgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~ 50 (479)
T 2hqm_A 18 GGGSGGVASARRAASYGAKTLLVEAK-ALGGTCV 50 (479)
T ss_dssp CCSHHHHHHHHHHHHTSCCEEEEESS-CTTHHHH
T ss_pred cCCHHHHHHHHHHHHCCCcEEEEeCC-CcCCcCc
Confidence 89999999999999999999999997 5888764
No 223
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=93.83 E-value=0.12 Score=51.91 Aligned_cols=30 Identities=13% Similarity=0.350 Sum_probs=28.8
Q ss_pred CCChhHHHHHHHHHHc--CCcEEEEccCCCCC
Q psy893 1 EAGHNGLVSAAYLARA--GLSVAVLERRHVLG 30 (523)
Q Consensus 1 GaG~~GL~aA~~La~~--G~~V~vlE~~~~~G 30 (523)
|||++||+||..|++. |++|+|+|+++.+|
T Consensus 9 GgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g 40 (452)
T 3oc4_A 9 GASFAGISAAIASRKKYPQAEISLIDKQATVG 40 (452)
T ss_dssp CCSHHHHHHHHHHHHHCSSSEEEEECSSSCCS
T ss_pred CCCHHHHHHHHHHHhhCcCCcEEEEECCCCCc
Confidence 8999999999999998 89999999999887
No 224
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=93.81 E-value=0.12 Score=52.02 Aligned_cols=33 Identities=33% Similarity=0.508 Sum_probs=30.6
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCCCCccee
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHVLGGAAV 34 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~ 34 (523)
|||++|++||..|++.|++|+|+|++ .+||.|.
T Consensus 11 GgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~ 43 (450)
T 1ges_A 11 GGGSGGIASINRAAMYGQKCALIEAK-ELGGTCV 43 (450)
T ss_dssp CCSHHHHHHHHHHHTTTCCEEEEESS-CTTHHHH
T ss_pred CCCHHHHHHHHHHHhCCCeEEEEcCC-CCCCccc
Confidence 89999999999999999999999998 6788764
No 225
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=93.78 E-value=0.036 Score=56.58 Aligned_cols=55 Identities=9% Similarity=0.201 Sum_probs=46.3
Q ss_pred HHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-eCCeEEEcCEEEEcCChH
Q psy893 230 GAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-TNGLEIKAKYVLSNTTAK 286 (523)
Q Consensus 230 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~~g~~~~ad~vI~a~~~~ 286 (523)
..+.+.+.+.++++|++|++++.|++|..++ +++ .|+ .+|+++.||.||++++..
T Consensus 226 ~~~~~~~~~~l~~~GV~v~~~~~V~~i~~~~-~~~-~v~l~dG~~i~aD~Vv~a~G~~ 281 (493)
T 1m6i_A 226 EYLSNWTMEKVRREGVKVMPNAIVQSVGVSS-GKL-LIKLKDGRKVETDHIVAAVGLE 281 (493)
T ss_dssp HHHHHHHHHHHHTTTCEEECSCCEEEEEEET-TEE-EEEETTSCEEEESEEEECCCEE
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEecC-CeE-EEEECCCCEEECCEEEECCCCC
Confidence 4677888899999999999999999998765 544 566 788899999999998865
No 226
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=93.64 E-value=0.14 Score=52.84 Aligned_cols=29 Identities=24% Similarity=0.507 Sum_probs=26.8
Q ss_pred CCChhHHHHHHHHHH---cCCcEEEEccCCCC
Q psy893 1 EAGHNGLVSAAYLAR---AGLSVAVLERRHVL 29 (523)
Q Consensus 1 GaG~~GL~aA~~La~---~G~~V~vlE~~~~~ 29 (523)
|||++|+++|+.|++ +|++|+|+|+...+
T Consensus 12 GgG~aGl~aA~~La~~~~~G~~V~liE~~~~~ 43 (538)
T 2aqj_A 12 GGGTAGWMAASYLVRALQQQANITLIESAAIP 43 (538)
T ss_dssp CCSHHHHHHHHHHHHHCCSSCEEEEEECSSSC
T ss_pred CCCHHHHHHHHHHHhhcCCCCEEEEECCCCCC
Confidence 899999999999999 99999999997643
No 227
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=93.56 E-value=0.13 Score=50.56 Aligned_cols=56 Identities=13% Similarity=0.172 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-eCCeEEEcCEEEEcCChHH
Q psy893 230 GAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-TNGLEIKAKYVLSNTTAKC 287 (523)
Q Consensus 230 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~~g~~~~ad~vI~a~~~~~ 287 (523)
..+.+.+.+.+++.|++++++++|++|..++ +. ..|+ .+|+++.+|.||++++...
T Consensus 187 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~-~~-~~v~~~~g~~i~~d~vv~a~G~~p 243 (384)
T 2v3a_A 187 PAAAKAVQAGLEGLGVRFHLGPVLASLKKAG-EG-LEAHLSDGEVIPCDLVVSAVGLRP 243 (384)
T ss_dssp HHHHHHHHHHHHTTTCEEEESCCEEEEEEET-TE-EEEEETTSCEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHHcCCEEEeCCEEEEEEecC-CE-EEEEECCCCEEECCEEEECcCCCc
Confidence 4678889999999999999999999998765 43 3566 7888899999999998653
No 228
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=93.54 E-value=0.042 Score=54.02 Aligned_cols=27 Identities=11% Similarity=0.118 Sum_probs=24.8
Q ss_pred CCChhHHHHHHHHHHcC--CcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAG--LSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G--~~V~vlE~~~ 27 (523)
|||++||+||..|++.| .+|+|+|++.
T Consensus 11 G~G~aGl~aA~~l~~~g~~~~V~lie~~~ 39 (384)
T 2v3a_A 11 GTGLAGYNLAREWRKLDGETPLLMITADD 39 (384)
T ss_dssp CCSHHHHHHHHHHHTTCSSSCEEEECSSC
T ss_pred CChHHHHHHHHHHHhhCCCCCEEEEECCC
Confidence 89999999999999999 4699999875
No 229
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=93.51 E-value=0.15 Score=47.72 Aligned_cols=33 Identities=33% Similarity=0.526 Sum_probs=30.5
Q ss_pred CCChhHHHHHHHHHHc-CCcEEEEccCCCCCcce
Q psy893 1 EAGHNGLVSAAYLARA-GLSVAVLERRHVLGGAA 33 (523)
Q Consensus 1 GaG~~GL~aA~~La~~-G~~V~vlE~~~~~GG~~ 33 (523)
|||++||+||+.|+++ |.+|+|+||++.+||.+
T Consensus 46 GgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~ 79 (284)
T 1rp0_A 46 GAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGA 79 (284)
T ss_dssp CCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTT
T ss_pred CccHHHHHHHHHHHHcCCCeEEEEECCCCCCCce
Confidence 8999999999999997 99999999999888743
No 230
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=93.46 E-value=0.12 Score=52.61 Aligned_cols=30 Identities=17% Similarity=0.249 Sum_probs=27.4
Q ss_pred CCChhHHHHHHHHHHc--CCcEEEEccCCCCC
Q psy893 1 EAGHNGLVSAAYLARA--GLSVAVLERRHVLG 30 (523)
Q Consensus 1 GaG~~GL~aA~~La~~--G~~V~vlE~~~~~G 30 (523)
|||++|++||..|+++ |.+|+|+|+++.++
T Consensus 18 GgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~ 49 (493)
T 1m6i_A 18 GGGTAAFAAARSIRARDPGARVLIVSEDPELP 49 (493)
T ss_dssp SCSHHHHHHHHHHHHHSTTCEEEEEESSSSCC
T ss_pred CChHHHHHHHHHHHhcCCCCeEEEEeCCCCCC
Confidence 8999999999999887 89999999998764
No 231
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=93.45 E-value=0.042 Score=54.30 Aligned_cols=48 Identities=10% Similarity=0.047 Sum_probs=37.9
Q ss_pred HHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-eCCeEEEcCEEEEcCCh
Q psy893 236 LARSAQASGAQLFTSQTVTEITLDSDKRASGVV-TNGLEIKAKYVLSNTTA 285 (523)
Q Consensus 236 l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~~g~~~~ad~vI~a~~~ 285 (523)
+.+.+++.|+++++++.|..+..+. +.. .|+ .+|+++.+|.||++.+.
T Consensus 208 ~~~~l~~~gi~v~~~~~v~~v~~~~-~~~-~v~~~~g~~i~~D~vi~~~g~ 256 (401)
T 3vrd_B 208 YGFGTENALIEWHPGPDAAVVKTDT-EAM-TVETSFGETFKAAVINLIPPQ 256 (401)
T ss_dssp SCTTSTTCSEEEECTTTTCEEEEET-TTT-EEEETTSCEEECSEEEECCCE
T ss_pred HHHHHHhcCcEEEeCceEEEEEecc-cce-EEEcCCCcEEEeeEEEEecCc
Confidence 3344567899999999999999876 433 466 88999999999998764
No 232
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=93.22 E-value=0.19 Score=51.31 Aligned_cols=33 Identities=36% Similarity=0.600 Sum_probs=30.5
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCCCCccee
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHVLGGAAV 34 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~ 34 (523)
|||.+||+||..|++.|++|+|+|++. +||.|.
T Consensus 9 GgG~aGl~aA~~l~~~g~~V~liE~~~-~GG~c~ 41 (500)
T 1onf_A 9 GGGSGGMAAARRAARHNAKVALVEKSR-LGGTCV 41 (500)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEEESSS-TTHHHH
T ss_pred CCCHHHHHHHHHHHHCCCcEEEEeCCC-cCcccc
Confidence 899999999999999999999999985 788764
No 233
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=93.07 E-value=0.24 Score=50.89 Aligned_cols=28 Identities=29% Similarity=0.520 Sum_probs=26.4
Q ss_pred CCChhHHHHHHHHHH------------cCCcEEEEccCCC
Q psy893 1 EAGHNGLVSAAYLAR------------AGLSVAVLERRHV 28 (523)
Q Consensus 1 GaG~~GL~aA~~La~------------~G~~V~vlE~~~~ 28 (523)
|||++||+||..|++ +|++|+|+|+.+.
T Consensus 14 GgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~~ 53 (526)
T 2pyx_A 14 GGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPDV 53 (526)
T ss_dssp CCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSSC
T ss_pred CCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCCC
Confidence 899999999999999 9999999999764
No 234
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=93.05 E-value=0.047 Score=54.63 Aligned_cols=53 Identities=15% Similarity=0.149 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-eC--CeEEEcCEEEEcCCh
Q psy893 229 MGAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-TN--GLEIKAKYVLSNTTA 285 (523)
Q Consensus 229 ~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~~--g~~~~ad~vI~a~~~ 285 (523)
.....+.+.+.++++|+++++++.|++|+. +++ .+. .+ ++++.+|.||++++.
T Consensus 199 ~~~~~~~l~~~l~~~GV~~~~~~~v~~v~~---~~~-~~~~~~g~~~~i~~d~vi~~~G~ 254 (430)
T 3hyw_A 199 IGASKRLVEDLFAERNIDWIANVAVKAIEP---DKV-IYEDLNGNTHEVPAKFTMFMPSF 254 (430)
T ss_dssp STTHHHHHHHHHHHTTCEEECSCEEEEECS---SEE-EEECTTSCEEEEECSEEEEECEE
T ss_pred hHHHHHHHHHHHHhCCeEEEeCceEEEEeC---Cce-EEEeeCCCceEeecceEEEeccC
Confidence 345566677888899999999999999853 333 233 33 357999999998764
No 235
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=92.83 E-value=0.071 Score=54.57 Aligned_cols=58 Identities=17% Similarity=0.191 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHHCC-cEEEeCceeeEEEECCCC-CeEEEE-e--CC-----eEEEcCEEEEcCChHHH
Q psy893 231 AVSQALARSAQASG-AQLFTSQTVTEITLDSDK-RASGVV-T--NG-----LEIKAKYVLSNTTAKCT 288 (523)
Q Consensus 231 ~l~~~l~~~~~~~G-~~i~~~~~V~~I~~~~~~-~~~~v~-~--~g-----~~~~ad~vI~a~~~~~~ 288 (523)
....++...+++.| ++|++++.|++|..++++ ++++|+ . +| .++.|+.||++++...+
T Consensus 227 s~~~~~l~~a~~~~n~~i~~~~~v~~i~~~~~g~~~~gV~~~~~~g~~~~~~~~~A~~VIlaaGa~~s 294 (507)
T 1coy_A 227 SLDKTYLAQAAATGKLTITTLHRVTKVAPATGSGYSVTMEQIDEQGNVVATKVVTADRVFFAAGSVGT 294 (507)
T ss_dssp CTTTTHHHHHHHTTCEEEECSEEEEEEEECSSSSEEEEEEEECTTSCEEEEEEEEEEEEEECSHHHHH
T ss_pred ChHHHHHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCcccccEEEEeCEEEEccCccCC
Confidence 33445555555665 999999999999997534 688888 4 56 36789999999999865
No 236
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=92.76 E-value=0.17 Score=50.84 Aligned_cols=34 Identities=38% Similarity=0.647 Sum_probs=32.2
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCCCCccee
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHVLGGAAV 34 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~ 34 (523)
|||++|++||..|++.|++|+|+|+++.+||.+.
T Consensus 8 G~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~ 41 (455)
T 2yqu_A 8 GAGPGGYVAAIRAAQLGMKVGVVEKEKALGGTCL 41 (455)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHH
T ss_pred CCChhHHHHHHHHHHCCCeEEEEeCCCCCCCccc
Confidence 8999999999999999999999999988999764
No 237
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=92.62 E-value=0.23 Score=47.36 Aligned_cols=53 Identities=9% Similarity=0.096 Sum_probs=41.8
Q ss_pred HHHHHHHHHC-CcEEEeCceeeEEEECCCCCeEEEE-eC-----CeEEEcCEEEEcCChHH
Q psy893 234 QALARSAQAS-GAQLFTSQTVTEITLDSDKRASGVV-TN-----GLEIKAKYVLSNTTAKC 287 (523)
Q Consensus 234 ~~l~~~~~~~-G~~i~~~~~V~~I~~~~~~~~~~v~-~~-----g~~~~ad~vI~a~~~~~ 287 (523)
+.+.+.+.+. |+++++++.|.+|..++ +++.+|+ .+ ++++.+|.||++++...
T Consensus 212 ~~~~~~l~~~~gv~i~~~~~v~~i~~~~-~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p 271 (338)
T 3itj_A 212 TIMQKRAEKNEKIEILYNTVALEAKGDG-KLLNALRIKNTKKNEETDLPVSGLFYAIGHTP 271 (338)
T ss_dssp HHHHHHHHHCTTEEEECSEEEEEEEESS-SSEEEEEEEETTTTEEEEEECSEEEECSCEEE
T ss_pred HHHHHHHHhcCCeEEeecceeEEEEccc-CcEEEEEEEECCCCceEEEEeCEEEEEeCCCC
Confidence 4456666665 99999999999999887 7777777 44 35789999999988653
No 238
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=92.61 E-value=0.062 Score=55.66 Aligned_cols=53 Identities=17% Similarity=0.130 Sum_probs=39.4
Q ss_pred HHHCCcEEEeCceeeEEEEC---CC-CCeEEEE-e--CC-e--EEEc-CEEEEcCChHHHHHhhC
Q psy893 240 AQASGAQLFTSQTVTEITLD---SD-KRASGVV-T--NG-L--EIKA-KYVLSNTTAKCTLLDLI 293 (523)
Q Consensus 240 ~~~~G~~i~~~~~V~~I~~~---~~-~~~~~v~-~--~g-~--~~~a-d~vI~a~~~~~~~~~ll 293 (523)
+.+.+.+|++++.|++|..+ ++ ++++||+ . +| + ++.| +.||+++++..+ .+||
T Consensus 218 ~~r~NL~Vlt~a~V~rIl~~~~~~g~~rA~GVe~~~~~g~~~~~v~A~kEVILsAGai~S-PqlL 281 (566)
T 3fim_B 218 QSRPNLSVLINAQVTKLVNSGTTNGLPAFRCVEYAEQEGAPTTTVCAKKEVVLSAGSVGT-PILL 281 (566)
T ss_dssp TTCTTEEEESSCEEEEEECCEEETTEEECCEEEEESSTTSCCEEEEEEEEEEECCHHHHH-HHHH
T ss_pred ccCCCeEEECCCEEEEEEeecCCCCCCEEEEEEEEECCCceEEEEEeeeEEEEecCCcCC-hHHH
Confidence 34568999999999999987 32 4788998 3 34 3 5778 569999998776 3443
No 239
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=92.57 E-value=0.23 Score=50.49 Aligned_cols=30 Identities=13% Similarity=0.205 Sum_probs=28.0
Q ss_pred CCChhHHHHHHHHHHcC---CcEEEEccCCCCC
Q psy893 1 EAGHNGLVSAAYLARAG---LSVAVLERRHVLG 30 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G---~~V~vlE~~~~~G 30 (523)
|||++|++||..|++.| ++|+|+|+++.+|
T Consensus 42 GaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~ 74 (490)
T 2bc0_A 42 GANHAGTACIKTMLTNYGDANEIVVFDQNSNIS 74 (490)
T ss_dssp CCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCS
T ss_pred CCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCC
Confidence 89999999999999988 9999999988765
No 240
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=92.40 E-value=0.21 Score=47.93 Aligned_cols=33 Identities=36% Similarity=0.617 Sum_probs=31.4
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCCCCcce
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHVLGGAA 33 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~ 33 (523)
|||++||++|..|+++|++|+|+|+++.+||..
T Consensus 10 G~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~ 42 (357)
T 4a9w_A 10 GGGQSGLSAGYFLRRSGLSYVILDAEASPGGAW 42 (357)
T ss_dssp CCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGG
T ss_pred CcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcc
Confidence 899999999999999999999999999998864
No 241
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=92.32 E-value=0.25 Score=49.79 Aligned_cols=33 Identities=39% Similarity=0.580 Sum_probs=30.6
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCCCCccee
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHVLGGAAV 34 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~ 34 (523)
|||++|++||..|++.|++|+|+|++ .+||.|.
T Consensus 11 GgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~ 43 (463)
T 2r9z_A 11 GGGSGGLAVAEKAAAFGKRVALIESK-ALGGTCV 43 (463)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHH
T ss_pred CCCHHHHHHHHHHHhCCCcEEEEcCC-CCCCcCc
Confidence 89999999999999999999999998 6888764
No 242
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=92.09 E-value=0.31 Score=48.15 Aligned_cols=30 Identities=23% Similarity=0.199 Sum_probs=27.3
Q ss_pred CCChhHHHHHHHHHHcCC--cEEEEccCCCCC
Q psy893 1 EAGHNGLVSAAYLARAGL--SVAVLERRHVLG 30 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~--~V~vlE~~~~~G 30 (523)
|||++|++||..|++.|+ +|+|+|+++.++
T Consensus 14 G~G~aGl~aA~~l~~~g~~~~V~lie~~~~~~ 45 (408)
T 2gqw_A 14 GAGLASVSFVAELRQAGYQGLITVVGDEAERP 45 (408)
T ss_dssp CCSHHHHHHHHHHHHHTCCSCEEEEESSCSCC
T ss_pred CChHHHHHHHHHHHccCCCCeEEEEECCCCCc
Confidence 899999999999999998 499999988654
No 243
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=92.01 E-value=0.047 Score=50.26 Aligned_cols=37 Identities=24% Similarity=0.256 Sum_probs=30.7
Q ss_pred CCCCCCCeEecCCCCCCCCCCCCc--cHHHHHHHHHHHhc
Q psy893 485 PFTLIPHLLLCGSGAHPGGGVCGA--PGYIAAQMVNRLMR 522 (523)
Q Consensus 485 ~~t~i~~LylaG~~~~pg~g~~~a--sG~~aA~~i~~~~~ 522 (523)
..+..+|||+|||++. |+|+.+| ||+.||++|++.|.
T Consensus 290 ~~~~~~~v~l~GDa~~-g~gv~~A~~sG~~aA~~I~~~L~ 328 (336)
T 3kkj_A 290 LSDADLGIYVCGDWCL-SGRVEGAWLSGQEAARRLLEHLQ 328 (336)
T ss_dssp EEETTTTEEECCGGGT-TSSHHHHHHHHHHHHHHHHHHTT
T ss_pred eeeCCCCEEEEecccC-CcCHHHHHHHHHHHHHHHHHHhh
Confidence 3456789999999974 5678766 99999999999874
No 244
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=91.90 E-value=0.38 Score=48.40 Aligned_cols=33 Identities=33% Similarity=0.469 Sum_probs=30.8
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCCCCccee
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHVLGGAAV 34 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~ 34 (523)
|||++||+||..|+++|++|+|+|| +.+||.|.
T Consensus 12 GaG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~ 44 (463)
T 4dna_A 12 GGGSGGVRSGRLAAALGKKVAIAEE-FRYGGTCV 44 (463)
T ss_dssp CCSHHHHHHHHHHHTTTCCEEEEES-SCTTHHHH
T ss_pred CcCHHHHHHHHHHHhCCCEEEEEeC-CCCCCccc
Confidence 8999999999999999999999999 77898764
No 245
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=91.90 E-value=0.099 Score=54.49 Aligned_cols=49 Identities=22% Similarity=0.283 Sum_probs=37.8
Q ss_pred HHHCCcEEEeCceeeEEEECCC---CCeEEEE-e--CCe--EEEc-CEEEEcCChHHH
Q psy893 240 AQASGAQLFTSQTVTEITLDSD---KRASGVV-T--NGL--EIKA-KYVLSNTTAKCT 288 (523)
Q Consensus 240 ~~~~G~~i~~~~~V~~I~~~~~---~~~~~v~-~--~g~--~~~a-d~vI~a~~~~~~ 288 (523)
.++.|.+|++++.|++|..+++ +++++|+ . +|+ ++.| +.||++++...+
T Consensus 241 ~~~~nl~i~~~~~v~~l~~~~~~~~~~~~GV~~~~~~g~~~~v~A~k~VILaaG~~~s 298 (587)
T 1gpe_A 241 YQRSNLEILTGQMVGKVLFKQTASGPQAVGVNFGTNKAVNFDVFAKHEVLLAAGSAIS 298 (587)
T ss_dssp TTCTTEEEEESCEEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEEECSCTTTH
T ss_pred hcCCCcEEEcCCEEEEEEECCCCCCCEEEEEEEEeCCCcEEEEEecccEEEccCCCCC
Confidence 3456899999999999998642 3788887 4 565 5678 789999998654
No 246
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=91.88 E-value=0.093 Score=54.22 Aligned_cols=56 Identities=25% Similarity=0.334 Sum_probs=41.5
Q ss_pred HHHHHHHHH-HCCcEEEeCceeeEEEECCCCCeEEEE-eC---Ce--EEEcC-EEEEcCChHHH
Q psy893 233 SQALARSAQ-ASGAQLFTSQTVTEITLDSDKRASGVV-TN---GL--EIKAK-YVLSNTTAKCT 288 (523)
Q Consensus 233 ~~~l~~~~~-~~G~~i~~~~~V~~I~~~~~~~~~~v~-~~---g~--~~~ad-~vI~a~~~~~~ 288 (523)
..++.+.+. +.|++|++++.|++|..++++++++|+ .+ |+ ++.|+ .||+|++...+
T Consensus 211 ~~a~l~~a~~~~~~~i~~~~~V~~i~~~~~~~~~GV~~~~~~~g~~~~i~A~k~VIlaaG~~~s 274 (546)
T 2jbv_A 211 SVSYIHPIVEQENFTLLTGLRARQLVFDADRRCTGVDIVDSAFGHTHRLTARNEVVLSTGAIDT 274 (546)
T ss_dssp HHHHTGGGTTCTTEEEECSCEEEEEEECTTSBEEEEEEESSTTSCEEEEEEEEEEEECSHHHHH
T ss_pred HHHHHHHHhcCCCcEEEeCCEEEEEEECCCCeEEEEEEEECCCCcEEEEEeCccEEEecCccCC
Confidence 334444333 468999999999999997546788888 43 53 67898 89999998654
No 247
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=91.58 E-value=0.36 Score=45.67 Aligned_cols=53 Identities=23% Similarity=0.216 Sum_probs=41.7
Q ss_pred HHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-e---CCe--EEEcCEEEEcCChHH
Q psy893 234 QALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-T---NGL--EIKAKYVLSNTTAKC 287 (523)
Q Consensus 234 ~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~---~g~--~~~ad~vI~a~~~~~ 287 (523)
..+.+.+++.|++++++++|++|..++ +++.+|+ . +|+ ++.+|.||++++...
T Consensus 194 ~~l~~~l~~~gv~i~~~~~v~~i~~~~-~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p 252 (319)
T 3cty_A 194 NAYVQEIKKRNIPYIMNAQVTEIVGDG-KKVTGVKYKDRTTGEEKLIETDGVFIYVGLIP 252 (319)
T ss_dssp HHHHHHHHHTTCCEECSEEEEEEEESS-SSEEEEEEEETTTCCEEEECCSEEEECCCEEE
T ss_pred HHHHHHHhcCCcEEEcCCeEEEEecCC-ceEEEEEEEEcCCCceEEEecCEEEEeeCCcc
Confidence 345666778899999999999999876 6666676 4 675 689999999987543
No 248
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=91.57 E-value=0.12 Score=52.75 Aligned_cols=28 Identities=29% Similarity=0.452 Sum_probs=26.5
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHV 28 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~ 28 (523)
|||.+|+++|.+|++.|++|+|+|+...
T Consensus 18 G~G~~g~~~a~~l~~~~~~v~~~e~~~~ 45 (507)
T 1coy_A 18 GSGYGGAVAALRLTQAGIPTQIVEMGRS 45 (507)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred CCCHHHHHHHHHHHHCCCcEEEEECCCC
Confidence 8999999999999999999999999764
No 249
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=91.54 E-value=0.084 Score=54.35 Aligned_cols=33 Identities=24% Similarity=0.361 Sum_probs=30.7
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCCCCcce
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHVLGGAA 33 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~ 33 (523)
|||++||+||+.|++.|++|+|+|+.+.++++.
T Consensus 114 GgGpaGL~aA~~La~~G~kV~VlEr~~~~~~R~ 146 (549)
T 3nlc_A 114 GFGPCGLFAGLVLAQMGFNPIIVERGKEVRERT 146 (549)
T ss_dssp CCSHHHHHHHHHHHHTTCCCEEECSSCCHHHHH
T ss_pred CcCHHHHHHHHHHHHCCCeEEEEEccCcccccc
Confidence 899999999999999999999999998887654
No 250
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=91.34 E-value=0.5 Score=47.58 Aligned_cols=33 Identities=27% Similarity=0.505 Sum_probs=30.8
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCCCCccee
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHVLGGAAV 34 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~ 34 (523)
|||++|++||..|++.|++|+|+|++ .+||.+.
T Consensus 11 GgG~aGl~aA~~l~~~g~~V~lie~~-~~GG~~~ 43 (467)
T 1zk7_A 11 GSGGAAMAAALKAVEQGAQVTLIERG-TIGGTCV 43 (467)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEEESS-STTHHHH
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEeCC-CCCcccc
Confidence 89999999999999999999999998 6888764
No 251
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=91.23 E-value=0.62 Score=47.13 Aligned_cols=31 Identities=19% Similarity=0.306 Sum_probs=28.3
Q ss_pred CCChhHHHHHHHHHHc--CCcEEEEccCCCCCc
Q psy893 1 EAGHNGLVSAAYLARA--GLSVAVLERRHVLGG 31 (523)
Q Consensus 1 GaG~~GL~aA~~La~~--G~~V~vlE~~~~~GG 31 (523)
|||++|++||..|++. |.+|+|+|+++.+++
T Consensus 43 G~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~ 75 (480)
T 3cgb_A 43 GGDAAGMSAAMQIVRNDENANVVTLEKGEIYSY 75 (480)
T ss_dssp CCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSB
T ss_pred CCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCC
Confidence 8999999999999996 899999999987653
No 252
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=91.00 E-value=0.66 Score=46.83 Aligned_cols=33 Identities=33% Similarity=0.426 Sum_probs=30.7
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCCCCcce
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHVLGGAA 33 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~ 33 (523)
|||++||+||..|++.|++|+|+|+++.+||..
T Consensus 10 GgG~aGl~aA~~la~~G~~V~liEk~~~~gG~~ 42 (476)
T 3lad_A 10 GAGPGGYVAAIKSAQLGLKTALIEKYKGKEGKT 42 (476)
T ss_dssp CCSHHHHHHHHHHHHHTCCEEEEECCBCTTSSB
T ss_pred CcCHHHHHHHHHHHhCCCEEEEEeCCCccCCCC
Confidence 899999999999999999999999998777764
No 253
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=90.98 E-value=0.59 Score=47.17 Aligned_cols=34 Identities=29% Similarity=0.560 Sum_probs=32.2
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCCCCccee
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHVLGGAAV 34 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~ 34 (523)
|||++|++||..|++.|++|+|+|+++.+||.+.
T Consensus 13 GgG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~ 46 (474)
T 1zmd_A 13 GSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCL 46 (474)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEEECSSSSSHHHH
T ss_pred CCCHHHHHHHHHHHhCCCeEEEEeCCCCcCCccc
Confidence 8999999999999999999999999989999764
No 254
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=90.91 E-value=0.64 Score=46.83 Aligned_cols=34 Identities=32% Similarity=0.588 Sum_probs=32.3
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCCCCccee
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHVLGGAAV 34 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~ 34 (523)
|||++|++||..|++.|++|+|+|+++.+||.|.
T Consensus 9 GgG~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~ 42 (468)
T 2qae_A 9 GGGPGGYVASIKAAQLGMKTACVEKRGALGGTCL 42 (468)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHH
T ss_pred CCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCcCC
Confidence 8999999999999999999999999989999875
No 255
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=90.86 E-value=0.46 Score=45.88 Aligned_cols=55 Identities=16% Similarity=0.116 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-eCCeEEEcCEEEEcCChH
Q psy893 231 AVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-TNGLEIKAKYVLSNTTAK 286 (523)
Q Consensus 231 ~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~~g~~~~ad~vI~a~~~~ 286 (523)
.+.+.+.+.+++.|++++++++|+.|..++ +..+.|+ .+|+++.+|+||+|++..
T Consensus 75 ~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~-~~~~~v~~~~g~~~~~~~li~AtG~~ 130 (360)
T 3ab1_A 75 DLVESLWAQAERYNPDVVLNETVTKYTKLD-DGTFETRTNTGNVYRSRAVLIAAGLG 130 (360)
T ss_dssp HHHHHHHHHHHTTCCEEECSCCEEEEEECT-TSCEEEEETTSCEEEEEEEEECCTTC
T ss_pred HHHHHHHHHHHHhCCEEEcCCEEEEEEECC-CceEEEEECCCcEEEeeEEEEccCCC
Confidence 455667777778899999999999999876 4234566 677789999999999874
No 256
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=90.85 E-value=0.45 Score=48.20 Aligned_cols=25 Identities=32% Similarity=0.359 Sum_probs=24.3
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEcc
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLER 25 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~ 25 (523)
|||++||+||..|++.|++|+|+||
T Consensus 16 GgG~aGl~aA~~la~~G~~V~liEk 40 (483)
T 3dgh_A 16 GGGSAGLACAKEAVLNGARVACLDF 40 (483)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEECC
T ss_pred CcCHHHHHHHHHHHHCCCEEEEEEe
Confidence 8999999999999999999999995
No 257
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=90.74 E-value=0.7 Score=43.94 Aligned_cols=56 Identities=16% Similarity=0.154 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-e---CC--eEEEcCEEEEcCChHH
Q psy893 230 GAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-T---NG--LEIKAKYVLSNTTAKC 287 (523)
Q Consensus 230 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~---~g--~~~~ad~vI~a~~~~~ 287 (523)
..+.+.+.+.+++.|+++++++.|.+|..+ +++.+|+ . +| +++.+|.||++++...
T Consensus 191 ~~~~~~l~~~l~~~gv~v~~~~~v~~i~~~--~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p 252 (335)
T 2zbw_A 191 EASVKELMKAHEEGRLEVLTPYELRRVEGD--ERVRWAVVFHNQTQEELALEVDAVLILAGYIT 252 (335)
T ss_dssp HHHHHHHHHHHHTTSSEEETTEEEEEEEES--SSEEEEEEEETTTCCEEEEECSEEEECCCEEE
T ss_pred HHHHHHHHhccccCCeEEecCCcceeEccC--CCeeEEEEEECCCCceEEEecCEEEEeecCCC
Confidence 456777888888889999999999999874 5555566 4 77 5789999999988653
No 258
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=90.72 E-value=0.45 Score=47.60 Aligned_cols=30 Identities=13% Similarity=0.231 Sum_probs=28.2
Q ss_pred CCChhHHHHHHHHHHc--CCcEEEEccCCCCC
Q psy893 1 EAGHNGLVSAAYLARA--GLSVAVLERRHVLG 30 (523)
Q Consensus 1 GaG~~GL~aA~~La~~--G~~V~vlE~~~~~G 30 (523)
|||++||+||..|++. |++|+|+|+++.+|
T Consensus 7 G~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~ 38 (447)
T 1nhp_A 7 GSSHGGYEAVEELLNLHPDAEIQWYEKGDFIS 38 (447)
T ss_dssp CSSHHHHHHHHHHHHHCTTSEEEEEESSSSSS
T ss_pred CCCHHHHHHHHHHHHhCcCCeEEEEECCCccC
Confidence 8999999999999998 99999999998775
No 259
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=90.70 E-value=0.52 Score=48.75 Aligned_cols=30 Identities=20% Similarity=0.211 Sum_probs=28.3
Q ss_pred CCChhHHHHHHHHHHc--CCcEEEEccCCCCC
Q psy893 1 EAGHNGLVSAAYLARA--GLSVAVLERRHVLG 30 (523)
Q Consensus 1 GaG~~GL~aA~~La~~--G~~V~vlE~~~~~G 30 (523)
|||++||+||..|++. |++|+|+|+++.++
T Consensus 8 GgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~ 39 (565)
T 3ntd_A 8 GGVAGGASAAARARRLSETAEIIMFERGEYVS 39 (565)
T ss_dssp CSSHHHHHHHHHHHHHCSSSEEEEECSSSCSS
T ss_pred CCCHHHHHHHHHHHhhCcCCCEEEEECCCCcc
Confidence 8999999999999998 89999999999876
No 260
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=90.62 E-value=0.52 Score=47.62 Aligned_cols=34 Identities=35% Similarity=0.576 Sum_probs=32.1
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCCCCccee
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHVLGGAAV 34 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~ 34 (523)
|||++|++||..|++.|++|+|+|+++.+||.+.
T Consensus 12 GgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~ 45 (478)
T 1v59_A 12 GGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTCL 45 (478)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHH
T ss_pred CCCHHHHHHHHHHHHCCCeEEEEecCCCcCCccc
Confidence 8999999999999999999999999999998764
No 261
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=90.49 E-value=0.36 Score=45.38 Aligned_cols=49 Identities=18% Similarity=0.272 Sum_probs=39.5
Q ss_pred HHHHHCCcEEEeCceeeEEEECCCCCeEEEE-e--CCe--EEEcCEEEEcCChHH
Q psy893 238 RSAQASGAQLFTSQTVTEITLDSDKRASGVV-T--NGL--EIKAKYVLSNTTAKC 287 (523)
Q Consensus 238 ~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~--~g~--~~~ad~vI~a~~~~~ 287 (523)
+.+++.|++++++++|.+|..++ +++.+|+ . +|+ ++.+|.||++++...
T Consensus 191 ~~~~~~gv~~~~~~~v~~i~~~~-~~~~~v~~~~~~g~~~~~~~D~vv~a~G~~p 244 (315)
T 3r9u_A 191 KVKKNEKIELITSASVDEVYGDK-MGVAGVKVKLKDGSIRDLNVPGIFTFVGLNV 244 (315)
T ss_dssp HHHHCTTEEEECSCEEEEEEEET-TEEEEEEEECTTSCEEEECCSCEEECSCEEE
T ss_pred HHHhcCCeEEEeCcEEEEEEcCC-CcEEEEEEEcCCCCeEEeecCeEEEEEcCCC
Confidence 33457899999999999999876 6777777 5 775 789999999988543
No 262
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=90.15 E-value=0.45 Score=49.52 Aligned_cols=30 Identities=23% Similarity=0.226 Sum_probs=28.3
Q ss_pred CCChhHHHHHHHHHHc--CCcEEEEccCCCCC
Q psy893 1 EAGHNGLVSAAYLARA--GLSVAVLERRHVLG 30 (523)
Q Consensus 1 GaG~~GL~aA~~La~~--G~~V~vlE~~~~~G 30 (523)
|||++||+||..|++. |++|+|+|+++.+|
T Consensus 43 GgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~ 74 (588)
T 3ics_A 43 GGVAGGASVAARLRRLSEEDEIIMVERGEYIS 74 (588)
T ss_dssp CCSHHHHHHHHHHHHHCSSSEEEEECSSSCSS
T ss_pred CCcHHHHHHHHHHHhhCcCCCEEEEECCCCcc
Confidence 8999999999999998 89999999999865
No 263
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=90.10 E-value=0.66 Score=46.67 Aligned_cols=33 Identities=30% Similarity=0.479 Sum_probs=30.7
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCCCCccee
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHVLGGAAV 34 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~ 34 (523)
|||++|++||..|++.|++|+|+|+++ +||.|.
T Consensus 13 G~G~aG~~aA~~l~~~g~~V~lie~~~-~GG~~~ 45 (464)
T 2eq6_A 13 GTGPGGYHAAIRAAQLGLKVLAVEAGE-VGGVCL 45 (464)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHHH
T ss_pred CcCHHHHHHHHHHHHCCCeEEEEeCCC-CCCCCC
Confidence 899999999999999999999999988 888763
No 264
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=90.02 E-value=0.76 Score=46.19 Aligned_cols=33 Identities=39% Similarity=0.599 Sum_probs=30.5
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCCCCccee
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHVLGGAAV 34 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~ 34 (523)
|||++|++||..|++.|++|+|+|++ .+||.+.
T Consensus 10 GaG~aGl~aA~~l~~~G~~V~liE~~-~~gG~~~ 42 (464)
T 2a8x_A 10 GAGPGGYVAAIRAAQLGLSTAIVEPK-YWGGVCL 42 (464)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEECSS-CTTHHHH
T ss_pred CCCHHHHHHHHHHHhCCCeEEEEeCC-CCCCccc
Confidence 89999999999999999999999998 6888764
No 265
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=89.76 E-value=0.51 Score=44.69 Aligned_cols=55 Identities=11% Similarity=0.073 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-eCCeEEEcCEEEEcCCh
Q psy893 229 MGAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-TNGLEIKAKYVLSNTTA 285 (523)
Q Consensus 229 ~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~~g~~~~ad~vI~a~~~ 285 (523)
...+.+.+.+.+++.|++++++++|++|..++ +..+.|. .+|+ +.+|+||+|++.
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~-~~~~~v~~~~g~-~~~d~vVlAtG~ 121 (332)
T 3lzw_A 66 AQELINNLKEQMAKFDQTICLEQAVESVEKQA-DGVFKLVTNEET-HYSKTVIITAGN 121 (332)
T ss_dssp HHHHHHHHHHHHTTSCCEEECSCCEEEEEECT-TSCEEEEESSEE-EEEEEEEECCTT
T ss_pred HHHHHHHHHHHHHHhCCcEEccCEEEEEEECC-CCcEEEEECCCE-EEeCEEEECCCC
Confidence 35788888888888999999999999999886 4334566 5564 999999999987
No 266
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=89.59 E-value=0.36 Score=47.68 Aligned_cols=31 Identities=19% Similarity=0.136 Sum_probs=28.5
Q ss_pred CCChhHHHHHHHHHH---cCCcEEEEccCCCCCc
Q psy893 1 EAGHNGLVSAAYLAR---AGLSVAVLERRHVLGG 31 (523)
Q Consensus 1 GaG~~GL~aA~~La~---~G~~V~vlE~~~~~GG 31 (523)
|||++||+||..|++ .|++|+|+|+++..+.
T Consensus 8 GgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~ 41 (409)
T 3h8l_A 8 GGRFGALTAAYTLKRLVGSKADVKVINKSRFSYF 41 (409)
T ss_dssp CSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEE
T ss_pred CCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCcee
Confidence 899999999999999 8999999999986544
No 267
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=89.47 E-value=0.64 Score=46.62 Aligned_cols=33 Identities=36% Similarity=0.572 Sum_probs=30.7
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCCCCccee
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHVLGGAAV 34 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~ 34 (523)
|||++|++||..|++.|++|+|+|++ .+||.+.
T Consensus 10 GgG~aGl~aA~~l~~~g~~V~lie~~-~~gG~~~ 42 (455)
T 1ebd_A 10 GAGPGGYVAAIRAAQLGQKVTIVEKG-NLGGVCL 42 (455)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHH
T ss_pred CCCHHHHHHHHHHHhCCCeEEEEECC-CCCCcCc
Confidence 89999999999999999999999998 7888764
No 268
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=89.47 E-value=0.41 Score=49.93 Aligned_cols=31 Identities=29% Similarity=0.424 Sum_probs=27.7
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC-CCCc
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH-VLGG 31 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~-~~GG 31 (523)
|||++|++||+.|++.|.+|+|+|++. .+|+
T Consensus 28 GgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~ 59 (641)
T 3cp8_A 28 GAGHAGCEAALAVARGGLHCLLITSDLSAVAR 59 (641)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEEESCGGGTTC
T ss_pred CccHHHHHHHHHHHHCCCcEEEEEecccccCC
Confidence 899999999999999999999999974 3443
No 269
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=88.95 E-value=0.42 Score=48.39 Aligned_cols=34 Identities=38% Similarity=0.581 Sum_probs=32.0
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCCCCccee
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHVLGGAAV 34 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~ 34 (523)
|||++|++||..|++.|++|+|+|+++.+||.+.
T Consensus 13 GaG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~ 46 (482)
T 1ojt_A 13 GGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCL 46 (482)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEEESSSCSSHHHH
T ss_pred CCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCcee
Confidence 8999999999999999999999999999998764
No 270
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=88.78 E-value=0.55 Score=48.37 Aligned_cols=29 Identities=38% Similarity=0.505 Sum_probs=27.1
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHVL 29 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~~ 29 (523)
|||.+|+++|.+|+++|++|+|||+....
T Consensus 14 G~G~aG~~~A~~L~~~g~~VlvlE~g~~~ 42 (546)
T 1kdg_A 14 GAGPGGIIAADRLSEAGKKVLLLERGGPS 42 (546)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEECSSCCC
T ss_pred CcCHHHHHHHHHHHhCCCeEEEEeCCCCC
Confidence 89999999999999999999999998753
No 271
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=88.44 E-value=0.82 Score=44.08 Aligned_cols=32 Identities=31% Similarity=0.448 Sum_probs=29.9
Q ss_pred CCChhHHHHHHHHHHcCC-cEEEEccCCCCCcce
Q psy893 1 EAGHNGLVSAAYLARAGL-SVAVLERRHVLGGAA 33 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~-~V~vlE~~~~~GG~~ 33 (523)
|||++||+||..|++.|+ +|+|+|+++ +||.+
T Consensus 11 GaG~aGl~aA~~l~~~g~~~v~lie~~~-~Gg~~ 43 (369)
T 3d1c_A 11 GAGAAGIGMAITLKDFGITDVIILEKGT-VGHSF 43 (369)
T ss_dssp CCSHHHHHHHHHHHHTTCCCEEEECSSS-TTHHH
T ss_pred CcCHHHHHHHHHHHHcCCCcEEEEecCC-CCCcc
Confidence 899999999999999999 999999998 88854
No 272
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=88.42 E-value=0.92 Score=42.50 Aligned_cols=51 Identities=14% Similarity=0.218 Sum_probs=39.5
Q ss_pred HHHHHHHH-CCcEEEeCceeeEEEECCCCCeEEEE-eC---Ce--EEEcCEEEEcCChH
Q psy893 235 ALARSAQA-SGAQLFTSQTVTEITLDSDKRASGVV-TN---GL--EIKAKYVLSNTTAK 286 (523)
Q Consensus 235 ~l~~~~~~-~G~~i~~~~~V~~I~~~~~~~~~~v~-~~---g~--~~~ad~vI~a~~~~ 286 (523)
.+.+.+++ .|++++++++|++|..++ +++.+|+ .+ |+ ++.+|.||++++..
T Consensus 184 ~~~~~l~~~~gv~v~~~~~v~~i~~~~-~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 241 (310)
T 1fl2_A 184 VLQDKLRSLKNVDIILNAQTTEVKGDG-SKVVGLEYRDRVSGDIHNIELAGIFVQIGLL 241 (310)
T ss_dssp HHHHHHHTCTTEEEESSEEEEEEEESS-SSEEEEEEEETTTCCEEEEECSEEEECSCEE
T ss_pred HHHHHHhhCCCeEEecCCceEEEEcCC-CcEEEEEEEECCCCcEEEEEcCEEEEeeCCc
Confidence 35566666 699999999999999876 7776676 43 53 68999999998754
No 273
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=88.38 E-value=0.91 Score=45.66 Aligned_cols=34 Identities=32% Similarity=0.585 Sum_probs=32.1
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCCCCccee
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHVLGGAAV 34 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~ 34 (523)
|||++|++||..|++.|++|+|+|+++.+||.+.
T Consensus 13 GaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~ 46 (470)
T 1dxl_A 13 GGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCL 46 (470)
T ss_dssp CCSHHHHHHHHHHHHHTCCEEEEECSSSSCCSHH
T ss_pred CCCHHHHHHHHHHHHCCCeEEEEeCCCCcccccc
Confidence 8999999999999999999999999988999764
No 274
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=88.33 E-value=0.91 Score=46.60 Aligned_cols=33 Identities=27% Similarity=0.414 Sum_probs=29.1
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC--------CCCcce
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH--------VLGGAA 33 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~--------~~GG~~ 33 (523)
|||.+|++||.++++.|.+|+|+|+.. .+||.|
T Consensus 49 G~GpaG~~aA~~aa~~G~kValIE~~~~~~~~~k~~lGGtC 89 (542)
T 4b1b_A 49 GGGPGGMASAKEAAAHGARVLLFDYVKPSSQGTKWGIGGTC 89 (542)
T ss_dssp CCSHHHHHHHHHHHTTTCCEEEECCCCCCTTCCCCCSSHHH
T ss_pred CCCHHHHHHHHHHHHCCCeEEEEeccccccccccCCCCCcc
Confidence 899999999999999999999999754 367765
No 275
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=88.01 E-value=1.3 Score=44.81 Aligned_cols=34 Identities=38% Similarity=0.510 Sum_probs=30.4
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEcc--------CCCCCccee
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLER--------RHVLGGAAV 34 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~--------~~~~GG~~~ 34 (523)
|||.+||+||..|++.|++|+|+|| ...+||.|.
T Consensus 13 G~G~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~ 54 (488)
T 3dgz_A 13 GGGSGGLACAKEAAQLGKKVAVADYVEPSPRGTKWGLGGTCV 54 (488)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEECCCCCCTTSCCCCTTCHHH
T ss_pred CCCHHHHHHHHHHHhCCCeEEEEEecccccccccCCcCCeec
Confidence 8999999999999999999999998 456787663
No 276
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=87.99 E-value=1.2 Score=45.03 Aligned_cols=33 Identities=42% Similarity=0.573 Sum_probs=30.2
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCCCCccee
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHVLGGAAV 34 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~ 34 (523)
|||++||+||..|++.|++|+|+|++ .+||.|.
T Consensus 27 GgG~aGl~aA~~la~~G~~V~liE~~-~~GG~~~ 59 (478)
T 3dk9_A 27 GGGSGGLASARRAAELGARAAVVESH-KLGGTCV 59 (478)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHH
T ss_pred CCCHHHHHHHHHHHhCCCeEEEEecC-CCCCccc
Confidence 89999999999999999999999976 6788764
No 277
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=87.66 E-value=1.2 Score=45.15 Aligned_cols=34 Identities=38% Similarity=0.635 Sum_probs=32.4
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCCCCccee
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHVLGGAAV 34 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~ 34 (523)
|||++||+||..|++.|++|+|+||++.+||.|.
T Consensus 32 GgG~aGl~aA~~la~~G~~V~liEk~~~~GG~~~ 65 (491)
T 3urh_A 32 GSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGTCL 65 (491)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHH
T ss_pred CCCHHHHHHHHHHHHCCCeEEEEecCCCCCCccc
Confidence 8999999999999999999999999999999764
No 278
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=87.50 E-value=0.63 Score=47.23 Aligned_cols=33 Identities=36% Similarity=0.485 Sum_probs=31.4
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCCCCccee
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHVLGGAAV 34 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~ 34 (523)
|||++||+||..|+++ ++|+|+|+++.+||.+.
T Consensus 115 GgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~ 147 (493)
T 1y56_A 115 GGGPAGIGAALELQQY-LTVALIEERGWLGGDMW 147 (493)
T ss_dssp CCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGG
T ss_pred CccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeee
Confidence 8999999999999999 99999999999999865
No 279
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=87.35 E-value=0.98 Score=47.51 Aligned_cols=30 Identities=27% Similarity=0.333 Sum_probs=27.9
Q ss_pred CCChhHHHHHHHHHH-cCCcEEEEccCCCCC
Q psy893 1 EAGHNGLVSAAYLAR-AGLSVAVLERRHVLG 30 (523)
Q Consensus 1 GaG~~GL~aA~~La~-~G~~V~vlE~~~~~G 30 (523)
|||++||++|+.|++ .|.+|+|+||++.++
T Consensus 39 GaGpaGL~~A~~La~~~G~~V~viEr~~~~~ 69 (639)
T 2dkh_A 39 GCGPAGLTLAAQLAAFPDIRTCIVEQKEGPM 69 (639)
T ss_dssp CCSHHHHHHHHHHTTCTTSCEEEECSSSSCC
T ss_pred CcCHHHHHHHHHHHHhCCCCEEEEeCCCCCC
Confidence 899999999999999 999999999987654
No 280
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=87.01 E-value=0.91 Score=44.71 Aligned_cols=31 Identities=35% Similarity=0.464 Sum_probs=28.6
Q ss_pred CCChhHHHHHHHHHHcCCc-EEEEccCCCCCc
Q psy893 1 EAGHNGLVSAAYLARAGLS-VAVLERRHVLGG 31 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~-V~vlE~~~~~GG 31 (523)
|||++||++|..|+++|.+ |+|+||++.++.
T Consensus 11 GaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~~ 42 (410)
T 3c96_A 11 GAGIGGLSCALALHQAGIGKVTLLESSSEIRP 42 (410)
T ss_dssp CCSHHHHHHHHHHHHTTCSEEEEEESSSSCCC
T ss_pred CCCHHHHHHHHHHHhCCCCeEEEEECCCCccc
Confidence 8999999999999999999 999999887643
No 281
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=86.92 E-value=0.42 Score=50.89 Aligned_cols=54 Identities=13% Similarity=0.108 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-eCCeEEEcCEEEEcCChH
Q psy893 232 VSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-TNGLEIKAKYVLSNTTAK 286 (523)
Q Consensus 232 l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~~g~~~~ad~vI~a~~~~ 286 (523)
+...+.+.+++.|++|+++++|++|..++ ..+..+. .+++++.+|.||++++..
T Consensus 569 ~~~~l~~~l~~~GV~i~~~~~V~~i~~~~-~~v~~~~~~~~~~i~aD~VV~A~G~~ 623 (690)
T 3k30_A 569 EVNRIQRRLIENGVARVTDHAVVAVGAGG-VTVRDTYASIERELECDAVVMVTARL 623 (690)
T ss_dssp CHHHHHHHHHHTTCEEEESEEEEEEETTE-EEEEETTTCCEEEEECSEEEEESCEE
T ss_pred hHHHHHHHHHHCCCEEEcCcEEEEEECCe-EEEEEccCCeEEEEECCEEEECCCCC
Confidence 45677888899999999999999998543 2111111 245689999999998864
No 282
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=86.48 E-value=0.69 Score=47.02 Aligned_cols=32 Identities=34% Similarity=0.395 Sum_probs=29.8
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCCCCcc
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHVLGGA 32 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~ 32 (523)
|||++||++|..|++.|++|+|+|+++.+|++
T Consensus 99 GgG~aGl~aA~~La~~G~~V~liEk~~~~g~~ 130 (497)
T 2bry_A 99 GAGPCGLRAAVELALLGARVVLVEKRIKFSRH 130 (497)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEEESCSSCCCC
T ss_pred CccHHHHHHHHHHHHCCCeEEEEEeccccCCC
Confidence 89999999999999999999999999887654
No 283
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=86.44 E-value=0.33 Score=47.70 Aligned_cols=31 Identities=32% Similarity=0.440 Sum_probs=28.8
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCCCCc
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHVLGG 31 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~~GG 31 (523)
|||++||++|..|+++|++|+|+||++.++.
T Consensus 33 GaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~ 63 (398)
T 2xdo_A 33 GGGPVGLTMAKLLQQNGIDVSVYERDNDREA 63 (398)
T ss_dssp CCSHHHHHHHHHHHTTTCEEEEEECSSSTTC
T ss_pred CCCHHHHHHHHHHHHCCCCEEEEeCCCCccc
Confidence 8999999999999999999999999887654
No 284
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=86.41 E-value=1.2 Score=41.86 Aligned_cols=55 Identities=15% Similarity=0.110 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-eCCeEEEcCEEEEcCChH
Q psy893 229 MGAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-TNGLEIKAKYVLSNTTAK 286 (523)
Q Consensus 229 ~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~~g~~~~ad~vI~a~~~~ 286 (523)
...+.+.+.+.+++.|+++++ ++|.+|..++ +.+ .|. .+|+++.+|+||+|++..
T Consensus 69 ~~~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~-~~~-~v~~~~g~~~~~d~lvlAtG~~ 124 (323)
T 3f8d_A 69 ASDMIKVFNKHIEKYEVPVLL-DIVEKIENRG-DEF-VVKTKRKGEFKADSVILGIGVK 124 (323)
T ss_dssp HHHHHHHHHHHHHTTTCCEEE-SCEEEEEEC---CE-EEEESSSCEEEEEEEEECCCCE
T ss_pred HHHHHHHHHHHHHHcCCEEEE-EEEEEEEecC-CEE-EEEECCCCEEEcCEEEECcCCC
Confidence 357888888989899999999 9999999876 543 466 677899999999999876
No 285
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=86.29 E-value=1.3 Score=41.52 Aligned_cols=50 Identities=16% Similarity=0.100 Sum_probs=38.3
Q ss_pred HHHHHHH-CCcEEEeCceeeEEEECCCCCeEEEE-e---CCe--EEEcCEEEEcCChH
Q psy893 236 LARSAQA-SGAQLFTSQTVTEITLDSDKRASGVV-T---NGL--EIKAKYVLSNTTAK 286 (523)
Q Consensus 236 l~~~~~~-~G~~i~~~~~V~~I~~~~~~~~~~v~-~---~g~--~~~ad~vI~a~~~~ 286 (523)
+.+.+.+ .|++++++++|++|..++ +++.+|+ . +|+ ++.+|.||++++..
T Consensus 184 ~~~~l~~~~gv~v~~~~~v~~i~~~~-~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 240 (311)
T 2q0l_A 184 TLEHAKNNDKIEFLTPYVVEEIKGDA-SGVSSLSIKNTATNEKRELVVPGFFIFVGYD 240 (311)
T ss_dssp HHHHHHTCTTEEEETTEEEEEEEEET-TEEEEEEEEETTTCCEEEEECSEEEECSCEE
T ss_pred HHHHHhhCCCeEEEeCCEEEEEECCC-CcEeEEEEEecCCCceEEEecCEEEEEecCc
Confidence 4555554 699999999999998875 5555566 4 675 68999999998754
No 286
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=86.15 E-value=0.81 Score=48.20 Aligned_cols=30 Identities=10% Similarity=0.066 Sum_probs=27.5
Q ss_pred CCChhHHHHHHHHHHc------CCcEEEEccCCCCC
Q psy893 1 EAGHNGLVSAAYLARA------GLSVAVLERRHVLG 30 (523)
Q Consensus 1 GaG~~GL~aA~~La~~------G~~V~vlE~~~~~G 30 (523)
|||++||+||+.|+++ |.+|+||||....+
T Consensus 29 G~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~~~~ 64 (662)
T 3gyx_A 29 GGGMGNCGAAFEAVRWADKYAPEAKILLVDKASLER 64 (662)
T ss_dssp CCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSCTTT
T ss_pred CCCHHHHHHHHHHHhhccccCCCCcEEEEEecCCCC
Confidence 8999999999999998 99999999987643
No 287
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=85.87 E-value=1.4 Score=44.22 Aligned_cols=35 Identities=20% Similarity=0.317 Sum_probs=32.6
Q ss_pred CCChhHHHHHHHHHH---cCCc---EEEEccCCCCCcceee
Q psy893 1 EAGHNGLVSAAYLAR---AGLS---VAVLERRHVLGGAAVT 35 (523)
Q Consensus 1 GaG~~GL~aA~~La~---~G~~---V~vlE~~~~~GG~~~s 35 (523)
|||++||+||..|++ .|++ |+|+|+++.+||.+..
T Consensus 9 GaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~ 49 (464)
T 2xve_A 9 GAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNY 49 (464)
T ss_dssp CCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSC
T ss_pred CccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeec
Confidence 899999999999999 9999 9999999999997653
No 288
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=85.84 E-value=0.55 Score=45.94 Aligned_cols=32 Identities=13% Similarity=-0.010 Sum_probs=29.3
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCCCCcc
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHVLGGA 32 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~ 32 (523)
|||..|+-+|..|++.|.+|+|+|+.+++..+
T Consensus 153 GgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~ 184 (385)
T 3klj_A 153 GGGILGIELAQAIIDSGTPASIGIILEYPLER 184 (385)
T ss_dssp CCSHHHHHHHHHHHHHTCCEEEECSSSSSCTT
T ss_pred CCCHHHHHHHHHHHhCCCeEEEEEcCCccchh
Confidence 89999999999999999999999999876543
No 289
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=85.76 E-value=2.9 Score=39.56 Aligned_cols=40 Identities=15% Similarity=0.269 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHHHC-CcEEEeCceeeEEEECC--C-C--CeEEEE
Q psy893 229 MGAVSQALARSAQAS-GAQLFTSQTVTEITLDS--D-K--RASGVV 268 (523)
Q Consensus 229 ~~~l~~~l~~~~~~~-G~~i~~~~~V~~I~~~~--~-~--~~~~v~ 268 (523)
...+...|.+.+.+. |++++.+++|++|..++ + + ++++|.
T Consensus 145 ~~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVv 190 (326)
T 2gjc_A 145 AALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVV 190 (326)
T ss_dssp HHHHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEE
T ss_pred hHHHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEE
Confidence 457788888888885 99999999999999874 2 4 788876
No 290
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=85.76 E-value=0.69 Score=45.98 Aligned_cols=32 Identities=22% Similarity=0.391 Sum_probs=29.3
Q ss_pred CCChhHHHHHHHHHH--cCCcEEEEccCCCCCcc
Q psy893 1 EAGHNGLVSAAYLAR--AGLSVAVLERRHVLGGA 32 (523)
Q Consensus 1 GaG~~GL~aA~~La~--~G~~V~vlE~~~~~GG~ 32 (523)
|||++||+||..|++ .|++|+|+|+++..++.
T Consensus 9 GgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~ 42 (430)
T 3h28_A 9 GGGVGGIATAYNLRNLMPDLKITLISDRPYFGFT 42 (430)
T ss_dssp CSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECG
T ss_pred CccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcC
Confidence 899999999999999 88999999999877654
No 291
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=85.55 E-value=0.58 Score=48.20 Aligned_cols=29 Identities=31% Similarity=0.305 Sum_probs=26.9
Q ss_pred CCChhHHHHHHHHHHc-CCcEEEEccCCCC
Q psy893 1 EAGHNGLVSAAYLARA-GLSVAVLERRHVL 29 (523)
Q Consensus 1 GaG~~GL~aA~~La~~-G~~V~vlE~~~~~ 29 (523)
|||.+|+++|.+|+++ |.+|+|||+....
T Consensus 20 G~G~~G~~~a~~l~~~~~~~v~~~e~g~~~ 49 (546)
T 2jbv_A 20 GGGSAGAAVAARLSEDPAVSVALVEAGPDD 49 (546)
T ss_dssp CCSHHHHHHHHHHTTSTTSCEEEECSSCCC
T ss_pred CcCHHHHHHHHHHHhCCCCCEEEEecCCcC
Confidence 8999999999999998 8999999998754
No 292
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=85.16 E-value=2.2 Score=43.17 Aligned_cols=33 Identities=15% Similarity=0.193 Sum_probs=30.4
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCCCCccee
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHVLGGAAV 34 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~ 34 (523)
|||.+||+||..|++.|++|+|+|++. +||.|.
T Consensus 15 GgG~aGl~aA~~la~~G~~V~liE~~~-~GGtc~ 47 (492)
T 3ic9_A 15 GTGTAGMGAYRAAKKHTDKVVLIEGGA-YGTTCA 47 (492)
T ss_dssp CCSHHHHHHHHHHHTTCSCEEEEESSC-SSCHHH
T ss_pred CCCHHHHHHHHHHHhCCCcEEEEeCCC-CCCccc
Confidence 899999999999999999999999975 888764
No 293
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=85.11 E-value=1.4 Score=45.20 Aligned_cols=58 Identities=17% Similarity=0.190 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHHHCC--cEEEeCceeeEEEECCCCCeEEEE-eCCeEEEcCEEEEcCChHH
Q psy893 230 GAVSQALARSAQASG--AQLFTSQTVTEITLDSDKRASGVV-TNGLEIKAKYVLSNTTAKC 287 (523)
Q Consensus 230 ~~l~~~l~~~~~~~G--~~i~~~~~V~~I~~~~~~~~~~v~-~~g~~~~ad~vI~a~~~~~ 287 (523)
..+.+.+.+.+++.+ .+|+++++|+++..++++..+.|+ .+|++++||.||+|++...
T Consensus 94 ~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~vV~AtG~~s 154 (542)
T 1w4x_A 94 PEILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLIMASGQLS 154 (542)
T ss_dssp HHHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSCC
T ss_pred HHHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCCCEEEeCEEEECcCCCC
Confidence 345555556566655 679999999999987533445677 7788899999999999753
No 294
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=84.89 E-value=1.1 Score=45.05 Aligned_cols=33 Identities=27% Similarity=0.542 Sum_probs=31.0
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCCCCccee
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHVLGGAAV 34 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~ 34 (523)
|||.+|++||..|++.|++|+|+|+ +.+||.|.
T Consensus 12 G~G~aGl~aA~~l~~~g~~V~lie~-~~~GG~~~ 44 (458)
T 1lvl_A 12 GGGPGGYVAAIRAGQLGIPTVLVEG-QALGGTCL 44 (458)
T ss_dssp CCSHHHHHHHHHHHHHTCCEEEECS-SCTTHHHH
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEcc-CCCCCcCC
Confidence 8999999999999999999999999 77899875
No 295
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=84.51 E-value=2.2 Score=40.17 Aligned_cols=56 Identities=25% Similarity=0.175 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHHHCCcEEEeCceeeEEEEC--CCCCeEEEE-eCCeEEEcCEEEEcCChHH
Q psy893 230 GAVSQALARSAQASGAQLFTSQTVTEITLD--SDKRASGVV-TNGLEIKAKYVLSNTTAKC 287 (523)
Q Consensus 230 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~--~~~~~~~v~-~~g~~~~ad~vI~a~~~~~ 287 (523)
..+.+.+.+.+++.|++++. .+|.+|..+ + +..+.|. .+|+++.+|+||+|++...
T Consensus 65 ~~~~~~l~~~~~~~gv~~~~-~~v~~i~~~~~~-~~~~~v~~~~g~~~~~~~vv~AtG~~~ 123 (325)
T 2q7v_A 65 MELAQRMHQQAEKFGAKVEM-DEVQGVQHDATS-HPYPFTVRGYNGEYRAKAVILATGADP 123 (325)
T ss_dssp HHHHHHHHHHHHHTTCEEEE-CCEEEEEECTTS-SSCCEEEEESSCEEEEEEEEECCCEEE
T ss_pred HHHHHHHHHHHHHcCCEEEe-eeEEEEEeccCC-CceEEEEECCCCEEEeCEEEECcCCCc
Confidence 46777888888899999987 689999887 4 3323455 7788999999999999753
No 296
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=84.28 E-value=2.3 Score=40.60 Aligned_cols=59 Identities=20% Similarity=0.304 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHHH-CCcEEEeCceeeEEEECCC----------------C--CeEEEE-e--------------CCeEE
Q psy893 229 MGAVSQALARSAQA-SGAQLFTSQTVTEITLDSD----------------K--RASGVV-T--------------NGLEI 274 (523)
Q Consensus 229 ~~~l~~~l~~~~~~-~G~~i~~~~~V~~I~~~~~----------------~--~~~~v~-~--------------~g~~~ 274 (523)
...+.+.|.+.+.+ .|++|+.++.|++|..+++ + ++.+|. . +..++
T Consensus 159 ~~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~~~v~~~g~~~~~~d~~~i 238 (344)
T 3jsk_A 159 AALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLVSMHHDDQSAMDPNTI 238 (344)
T ss_dssp HHHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC----------------CCEEEEEEEEEEHHHHTTSSSSSCCBCEEE
T ss_pred HHHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccCCCceEeEEEeeeeeeeccCCcccccCceEE
Confidence 45677889988888 4999999999999987651 2 666765 2 22478
Q ss_pred EcCEEEEcCChHH
Q psy893 275 KAKYVLSNTTAKC 287 (523)
Q Consensus 275 ~ad~vI~a~~~~~ 287 (523)
+|+.||.|++...
T Consensus 239 ~Ak~VV~ATG~~s 251 (344)
T 3jsk_A 239 NAPVIISTTGHDG 251 (344)
T ss_dssp ECSEEEECCCSSS
T ss_pred EcCEEEECCCCCc
Confidence 9999999988654
No 297
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=84.22 E-value=0.93 Score=45.16 Aligned_cols=30 Identities=17% Similarity=0.265 Sum_probs=26.8
Q ss_pred CCChhHHHHHHHHHHcC--CcEEEEccCCCCC
Q psy893 1 EAGHNGLVSAAYLARAG--LSVAVLERRHVLG 30 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G--~~V~vlE~~~~~G 30 (523)
|||.+|++||..|++.| .+|+|+|+++..+
T Consensus 7 G~G~AGl~aA~~l~~~g~~~~V~lie~~~~~~ 38 (437)
T 4eqs_A 7 GAVAGGATCASQIRRLDKESDIIIFEKDRDMS 38 (437)
T ss_dssp CCSTTHHHHHHHHHHHCSSSCEEEEESSSCSS
T ss_pred CCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCC
Confidence 89999999999999998 4799999987654
No 298
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=83.95 E-value=0.68 Score=46.41 Aligned_cols=27 Identities=26% Similarity=0.322 Sum_probs=25.5
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~ 27 (523)
|.|.+|+++|..|+++|++|++.|++.
T Consensus 16 G~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 16 GLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp CCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred eeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 789999999999999999999999865
No 299
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=83.91 E-value=1.8 Score=40.91 Aligned_cols=55 Identities=22% Similarity=0.295 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEEeCCeEEEcCEEEEcCChHH
Q psy893 230 GAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVVTNGLEIKAKYVLSNTTAKC 287 (523)
Q Consensus 230 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~~~g~~~~ad~vI~a~~~~~ 287 (523)
..+.+.+.+.+++.|++++.++ |..|..++ +.+ .|+.+|+++++|.||+|++.+.
T Consensus 70 ~~~~~~l~~~~~~~gv~~~~~~-v~~i~~~~-~~~-~v~~~~~~~~~~~vv~A~G~~~ 124 (333)
T 1vdc_A 70 VELTDKFRKQSERFGTTIFTET-VTKVDFSS-KPF-KLFTDSKAILADAVILAIGAVA 124 (333)
T ss_dssp HHHHHHHHHHHHHTTCEEECCC-CCEEECSS-SSE-EEECSSEEEEEEEEEECCCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEeE-EEEEEEcC-CEE-EEEECCcEEEcCEEEECCCCCc
Confidence 4677888888889999999987 99998876 543 3445677899999999999764
No 300
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=83.61 E-value=1.3 Score=44.31 Aligned_cols=56 Identities=13% Similarity=-0.106 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-eC---Ce---EEEcCEEEEcCChHH
Q psy893 230 GAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-TN---GL---EIKAKYVLSNTTAKC 287 (523)
Q Consensus 230 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~~---g~---~~~ad~vI~a~~~~~ 287 (523)
..+.+.|.+.+++.+..|+++++|++|..++ +++ .|+ .+ |+ ++.+|.||+|++.+.
T Consensus 115 ~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~-~~~-~V~~~~~~~G~~~~~~~~d~VVvAtG~~s 177 (447)
T 2gv8_A 115 HTIQEYQRIYAQPLLPFIKLATDVLDIEKKD-GSW-VVTYKGTKAGSPISKDIFDAVSICNGHYE 177 (447)
T ss_dssp HHHHHHHHHHHGGGGGGEECSEEEEEEEEET-TEE-EEEEEESSTTCCEEEEEESEEEECCCSSS
T ss_pred HHHHHHHHHHHHHhhCeEEeCCEEEEEEeCC-CeE-EEEEeecCCCCeeEEEEeCEEEECCCCCC
Confidence 4566677777777778899999999998876 543 455 43 66 789999999999854
No 301
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=83.29 E-value=2.2 Score=42.50 Aligned_cols=32 Identities=25% Similarity=0.340 Sum_probs=28.3
Q ss_pred CCChhHHHHHHHHHHc--CCcEEEEccCCCCCcc
Q psy893 1 EAGHNGLVSAAYLARA--GLSVAVLERRHVLGGA 32 (523)
Q Consensus 1 GaG~~GL~aA~~La~~--G~~V~vlE~~~~~GG~ 32 (523)
|||++||+||..|++. |++|+|+|+.+.+++.
T Consensus 10 GgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~ 43 (449)
T 3kd9_A 10 GGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHA 43 (449)
T ss_dssp CCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC--
T ss_pred CCcHHHHHHHHHHHHhCcCCCEEEEECCCccccC
Confidence 8999999999999998 8899999999987654
No 302
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=83.17 E-value=0.29 Score=49.85 Aligned_cols=33 Identities=15% Similarity=-0.046 Sum_probs=26.1
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCCCCcce
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHVLGGAA 33 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~ 33 (523)
|+|++||++|+.|.++|...+++|+.+..|+.-
T Consensus 46 GaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~ 78 (501)
T 4b63_A 46 GFGPASLAIAIALHDALDPRLNKSASNIHAQPK 78 (501)
T ss_dssp CCSHHHHHHHHHHHHHHCTTTCTTC----CCCC
T ss_pred cccHHHHHHHHHHHhcCCCceEEeccccCCCcc
Confidence 899999999999999999999999888777643
No 303
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=82.87 E-value=2 Score=43.85 Aligned_cols=38 Identities=13% Similarity=-0.029 Sum_probs=27.9
Q ss_pred CCCCCCCCeEecCCCCCCCC-CCCCc--cHHHHHHHHHHHh
Q psy893 484 SPFTLIPHLLLCGSGAHPGG-GVCGA--PGYIAAQMVNRLM 521 (523)
Q Consensus 484 ~~~t~i~~LylaG~~~~pg~-g~~~a--sG~~aA~~i~~~~ 521 (523)
..+|.+||+|.+||.+.... -+..| .|..||..|.+.|
T Consensus 475 ~~~ts~p~VfA~GD~~~~~~~~~~~A~~~g~~aa~~i~~~L 515 (521)
T 1hyu_A 475 KCETSVKGVFAAGDCTTVPYKQIIIATGEGAKASLSAFDYL 515 (521)
T ss_dssp TCBCSSTTEEECSTTBCCSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCEEEeecccCCCcceeeehHHhHHHHHHHHHHHH
Confidence 45788999999999985321 12222 8999999988766
No 304
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=82.87 E-value=1 Score=36.69 Aligned_cols=27 Identities=19% Similarity=0.238 Sum_probs=25.4
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~ 27 (523)
|+|-.|...|..|+++|++|+++|+++
T Consensus 13 G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 13 GSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 889999999999999999999999865
No 305
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=82.78 E-value=0.89 Score=37.84 Aligned_cols=28 Identities=25% Similarity=0.381 Sum_probs=25.8
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHV 28 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~ 28 (523)
|+|..|...|..|.+.|++|++++++..
T Consensus 26 G~G~iG~~la~~L~~~g~~V~vid~~~~ 53 (155)
T 2g1u_A 26 GCGRLGSLIANLASSSGHSVVVVDKNEY 53 (155)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred CCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 8999999999999999999999998753
No 306
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=82.59 E-value=0.73 Score=43.37 Aligned_cols=29 Identities=21% Similarity=0.429 Sum_probs=26.2
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHVL 29 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~~ 29 (523)
|||..|+-+|..|++.|.+|+|+|+.+++
T Consensus 152 GgG~ig~E~A~~l~~~g~~Vtlv~~~~~~ 180 (312)
T 4gcm_A 152 GGGDSAVEEGTFLTKFADKVTIVHRRDEL 180 (312)
T ss_dssp CCSHHHHHHHHHHTTTCSEEEEECSSSSC
T ss_pred CCCHHHHHHHHHHHhcCCEEEEEeccccc
Confidence 89999999999999999999999988765
No 307
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=82.21 E-value=1 Score=36.28 Aligned_cols=27 Identities=19% Similarity=0.331 Sum_probs=25.2
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~ 27 (523)
|+|..|...|..|++.|++|+++|++.
T Consensus 11 G~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 11 GIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 899999999999999999999999854
No 308
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=82.13 E-value=0.93 Score=43.98 Aligned_cols=31 Identities=35% Similarity=0.472 Sum_probs=28.6
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCCCCc
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHVLGG 31 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~~GG 31 (523)
|||..|+-+|..|++.|.+|+|+|+.+++..
T Consensus 150 GgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 180 (367)
T 1xhc_A 150 GGGFIGLELAGNLAEAGYHVKLIHRGAMFLG 180 (367)
T ss_dssp ECSHHHHHHHHHHHHTTCEEEEECSSSCCTT
T ss_pred CCCHHHHHHHHHHHhCCCEEEEEeCCCeecc
Confidence 7999999999999999999999999887654
No 309
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=81.76 E-value=0.72 Score=46.00 Aligned_cols=31 Identities=23% Similarity=0.428 Sum_probs=27.8
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCCCCc
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHVLGG 31 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~~GG 31 (523)
|.|.+|+++|..|+++|++|++.|.+...-|
T Consensus 12 G~G~~G~~~a~~l~~~G~~v~~~D~~~~~~~ 42 (439)
T 2x5o_A 12 GLGLTGLSCVDFFLARGVTPRVMDTRMTPPG 42 (439)
T ss_dssp CCHHHHHHHHHHHHTTTCCCEEEESSSSCTT
T ss_pred eecHHHHHHHHHHHhCCCEEEEEECCCCcch
Confidence 8899999999999999999999999876543
No 310
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=81.55 E-value=2 Score=41.97 Aligned_cols=29 Identities=31% Similarity=0.420 Sum_probs=27.3
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHVL 29 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~~ 29 (523)
|||++||++|..|+++|++|+||||++.+
T Consensus 8 GaGpaGl~~A~~L~~~G~~v~v~Er~~~~ 36 (412)
T 4hb9_A 8 GAGIGGTCLAHGLRKHGIKVTIYERNSAA 36 (412)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSSCSS
T ss_pred CcCHHHHHHHHHHHhCCCCEEEEecCCCC
Confidence 89999999999999999999999998754
No 311
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=81.49 E-value=1.2 Score=36.25 Aligned_cols=28 Identities=18% Similarity=0.277 Sum_probs=26.1
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHV 28 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~ 28 (523)
|.|-.|...|..|.+.|++|+++|+++.
T Consensus 14 G~G~~G~~la~~L~~~g~~v~vid~~~~ 41 (140)
T 3fwz_A 14 GYGRVGSLLGEKLLASDIPLVVIETSRT 41 (140)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEEESCHH
T ss_pred CcCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 8899999999999999999999999763
No 312
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=80.19 E-value=2.7 Score=43.20 Aligned_cols=31 Identities=23% Similarity=0.147 Sum_probs=28.9
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCCCCc
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHVLGG 31 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~~GG 31 (523)
|||++||++|..|+++|.+|+|+||++.++.
T Consensus 33 GaGpaGl~~A~~La~~G~~V~vlEr~~~~~~ 63 (549)
T 2r0c_A 33 GGGPVGMALALDLAHRQVGHLVVEQTDGTIT 63 (549)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEECSSCSCCS
T ss_pred CcCHHHHHHHHHHHHCCCCEEEEeCCCCCCC
Confidence 8999999999999999999999999987653
No 313
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=79.52 E-value=3.8 Score=40.88 Aligned_cols=43 Identities=14% Similarity=0.010 Sum_probs=33.9
Q ss_pred CCcEEEeCceeeEEEECCCCCeEEEE-e---CCe--EEEcCEEEEcCChHH
Q psy893 243 SGAQLFTSQTVTEITLDSDKRASGVV-T---NGL--EIKAKYVLSNTTAKC 287 (523)
Q Consensus 243 ~G~~i~~~~~V~~I~~~~~~~~~~v~-~---~g~--~~~ad~vI~a~~~~~ 287 (523)
.|++|++++.|++|..++ ++ +.|+ . +|+ ++.+|.||+|++...
T Consensus 329 ~~v~i~~~~~v~~v~~~~-~~-~~v~~~~~~~g~~~~~~~D~Vv~AtG~~p 377 (463)
T 3s5w_A 329 PRHAFRCMTTVERATATA-QG-IELALRDAGSGELSVETYDAVILATGYER 377 (463)
T ss_dssp CCSEEETTEEEEEEEEET-TE-EEEEEEETTTCCEEEEEESEEEECCCEEC
T ss_pred CCeEEEeCCEEEEEEecC-CE-EEEEEEEcCCCCeEEEECCEEEEeeCCCC
Confidence 589999999999999876 44 3354 4 665 489999999998654
No 314
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=78.93 E-value=0.9 Score=44.54 Aligned_cols=28 Identities=25% Similarity=0.482 Sum_probs=25.4
Q ss_pred CCChhHHHHHHHHHHcC--CcEEEEccCCC
Q psy893 1 EAGHNGLVSAAYLARAG--LSVAVLERRHV 28 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G--~~V~vlE~~~~ 28 (523)
|||.+|++||.+|++.| .+|+|+|+++.
T Consensus 9 G~G~AG~~aA~~L~~~~~~~~Vtlie~~~~ 38 (401)
T 3vrd_B 9 GGGTGGATAAKYIKLADPSIEVTLIEPNET 38 (401)
T ss_dssp CCSHHHHHHHHHHHHHCTTSEEEEECSCSS
T ss_pred CCcHHHHHHHHHHHhcCcCCeEEEEeCCCC
Confidence 89999999999999876 48999999875
No 315
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=78.69 E-value=1.5 Score=43.75 Aligned_cols=28 Identities=29% Similarity=0.401 Sum_probs=26.5
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHV 28 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~ 28 (523)
|.|.-|+..|..|+++|++|++++++..
T Consensus 15 GlG~vG~~~A~~La~~G~~V~~~D~~~~ 42 (446)
T 4a7p_A 15 GTGYVGLVSGACFSDFGHEVVCVDKDAR 42 (446)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 8999999999999999999999999864
No 316
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=78.31 E-value=3.8 Score=38.77 Aligned_cols=53 Identities=21% Similarity=0.230 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEE-E-eCCeEEEcCEEEEcCChH
Q psy893 230 GAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGV-V-TNGLEIKAKYVLSNTTAK 286 (523)
Q Consensus 230 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v-~-~~g~~~~ad~vI~a~~~~ 286 (523)
..+.+.+.+.+++.|+++++++ |.+|.. + +.+ .| . .+|+++.+|+||+|++..
T Consensus 71 ~~~~~~l~~~~~~~~v~~~~~~-v~~i~~-~-~~~-~v~~~~~g~~~~~d~lviAtG~~ 125 (335)
T 2a87_A 71 PELMDEMREQALRFGADLRMED-VESVSL-H-GPL-KSVVTADGQTHRARAVILAMGAA 125 (335)
T ss_dssp HHHHHHHHHHHHHTTCEEECCC-EEEEEC-S-SSS-EEEEETTSCEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHHHcCCEEEEee-EEEEEe-C-CcE-EEEEeCCCCEEEeCEEEECCCCC
Confidence 4677788888888999999997 989887 4 443 35 5 677789999999999875
No 317
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=78.04 E-value=2.1 Score=42.39 Aligned_cols=28 Identities=21% Similarity=0.338 Sum_probs=25.6
Q ss_pred CCChhHHHHHHHHHHcC--CcEEEEccCCC
Q psy893 1 EAGHNGLVSAAYLARAG--LSVAVLERRHV 28 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G--~~V~vlE~~~~ 28 (523)
|||.+|++||..|++.+ ++|+|+|++++
T Consensus 9 GgG~aGl~aA~~L~~~~~~~~VtlI~~~~~ 38 (430)
T 3hyw_A 9 GGGVGGIATAYNLRNLMPDLKITLISDRPY 38 (430)
T ss_dssp CSSHHHHHHHHHHHHHCTTCEEEEECSSSE
T ss_pred CCCHHHHHHHHHHhccCcCCeEEEEcCCCC
Confidence 89999999999999876 78999999875
No 318
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=77.87 E-value=2.1 Score=44.32 Aligned_cols=27 Identities=37% Similarity=0.503 Sum_probs=25.1
Q ss_pred CCChhHHHHHHHHHHc-CCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARA-GLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~-G~~V~vlE~~~ 27 (523)
|||.+|+++|.+|++. |.+|+|||+..
T Consensus 26 GgG~AG~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 26 GGGLTGLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp CCSHHHHHHHHHHTTSTTCCEEEECSSC
T ss_pred CCcHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 8999999999999975 89999999976
No 319
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=77.83 E-value=1.5 Score=34.01 Aligned_cols=27 Identities=33% Similarity=0.372 Sum_probs=24.8
Q ss_pred CCChhHHHHHHHHHHcC-CcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAG-LSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G-~~V~vlE~~~ 27 (523)
|+|..|...+..|.+.| ++|++++++.
T Consensus 12 G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 12 GAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp CCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred CCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 78999999999999999 9999999864
No 320
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=77.77 E-value=1.3 Score=41.52 Aligned_cols=28 Identities=29% Similarity=0.438 Sum_probs=23.3
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHV 28 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~ 28 (523)
|+|..|+-+|..|++.|.+|+|+|+...
T Consensus 159 GgG~ig~e~A~~l~~~G~~Vt~v~~~~~ 186 (314)
T 4a5l_A 159 GGGDAAMEEALHLTKYGSKVIILHRRDA 186 (314)
T ss_dssp CSSHHHHHHHHHHTTTSSEEEEECSSSS
T ss_pred CCChHHHHHHHHHHHhCCeeeeeccccc
Confidence 7888888888888888888888887543
No 321
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=77.68 E-value=1.5 Score=43.38 Aligned_cols=28 Identities=21% Similarity=0.313 Sum_probs=26.1
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHV 28 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~ 28 (523)
|.|.-|+..|..|+++|++|++++++..
T Consensus 18 GlGyvGlp~A~~La~~G~~V~~~D~~~~ 45 (431)
T 3ojo_A 18 GLGYIGLPTSIMFAKHGVDVLGVDINQQ 45 (431)
T ss_dssp CCSTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred eeCHHHHHHHHHHHHCCCEEEEEECCHH
Confidence 8899999999999999999999998753
No 322
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=77.68 E-value=1.3 Score=45.51 Aligned_cols=29 Identities=34% Similarity=0.353 Sum_probs=26.6
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCCCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHVLG 30 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~~G 30 (523)
|||.+|+++|.+|++ |.+|+|||+....+
T Consensus 33 GsG~AG~v~A~rLse-g~~VlvLEaG~~~~ 61 (536)
T 1ju2_A 33 GGGTSGCPLAATLSE-KYKVLVLERGSLPT 61 (536)
T ss_dssp CCSTTHHHHHHHHTT-TSCEEEECSSBCGG
T ss_pred CccHHHHHHHHHHhc-CCcEEEEecCCCcC
Confidence 899999999999999 99999999976643
No 323
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=77.02 E-value=1.8 Score=41.18 Aligned_cols=28 Identities=21% Similarity=0.151 Sum_probs=24.6
Q ss_pred CCChhHHH-HHHHHHHcCCcEEEEccCCC
Q psy893 1 EAGHNGLV-SAAYLARAGLSVAVLERRHV 28 (523)
Q Consensus 1 GaG~~GL~-aA~~La~~G~~V~vlE~~~~ 28 (523)
|.|-+|++ +|..|.++|++|++.|++..
T Consensus 11 GiGg~Gms~~A~~L~~~G~~V~~~D~~~~ 39 (326)
T 3eag_A 11 GIGGTFMGGLAAIAKEAGFEVSGCDAKMY 39 (326)
T ss_dssp SCCSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred EECHHHHHHHHHHHHhCCCEEEEEcCCCC
Confidence 78999997 77888999999999999764
No 324
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=76.47 E-value=4.4 Score=40.49 Aligned_cols=45 Identities=22% Similarity=0.249 Sum_probs=34.6
Q ss_pred CCcEEEeCceeeEEEECCCC-CeEEEE-e---------------CC--eEEEcCEEEEcCChHH
Q psy893 243 SGAQLFTSQTVTEITLDSDK-RASGVV-T---------------NG--LEIKAKYVLSNTTAKC 287 (523)
Q Consensus 243 ~G~~i~~~~~V~~I~~~~~~-~~~~v~-~---------------~g--~~~~ad~vI~a~~~~~ 287 (523)
.|++|++++.+.+|..++++ ++.+|+ . +| +++.+|.||.+++...
T Consensus 270 ~gv~~~~~~~~~~i~~~~~~~~v~~v~~~~~~l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G~~p 333 (460)
T 1cjc_A 270 RAWGLRFFRSPQQVLPSPDGRRAAGIRLAVTRLEGIGEATRAVPTGDVEDLPCGLVLSSIGYKS 333 (460)
T ss_dssp EEEEEECSEEEEEEEECTTSSSEEEEEEEEEEEESSGGGCEEEEEEEEEEEECSEEEECCCEEC
T ss_pred ceEEEECCCChheEEcCCCCceEEEEEEEEEEEccccCCCcccCCCceEEEEcCEEEECCCCCC
Confidence 78999999999999875324 666665 3 34 4789999999988654
No 325
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=76.24 E-value=1.3 Score=45.58 Aligned_cols=29 Identities=41% Similarity=0.370 Sum_probs=26.7
Q ss_pred CCChhHHHHHHHHHH-cCCcEEEEccCCCC
Q psy893 1 EAGHNGLVSAAYLAR-AGLSVAVLERRHVL 29 (523)
Q Consensus 1 GaG~~GL~aA~~La~-~G~~V~vlE~~~~~ 29 (523)
|||.+|+++|.+|++ .|.+|+|||+....
T Consensus 9 G~G~aG~v~A~rLse~~~~~VlllEaG~~~ 38 (566)
T 3fim_B 9 GAGNAGNVVAARLTEDPDVSVLVLEAGVSD 38 (566)
T ss_dssp CCSTTHHHHHHHHTTSTTCCEEEECSSBCC
T ss_pred CCcHHHHHHHHHHHhCcCCcEEEEecCCcc
Confidence 899999999999998 69999999997654
No 326
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=76.13 E-value=2.6 Score=41.83 Aligned_cols=28 Identities=21% Similarity=0.372 Sum_probs=26.6
Q ss_pred CCChhHHHHHHHHHH---cCCcEEEEccCCC
Q psy893 1 EAGHNGLVSAAYLAR---AGLSVAVLERRHV 28 (523)
Q Consensus 1 GaG~~GL~aA~~La~---~G~~V~vlE~~~~ 28 (523)
|||++||+||..|++ .|++|+|+|+++.
T Consensus 11 GgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~ 41 (437)
T 3sx6_A 11 GAGTGGMPAAYEMKEALGSGHEVTLISANDY 41 (437)
T ss_dssp CCSTTHHHHHHHHHHHHGGGSEEEEECSSSE
T ss_pred CCcHHHHHHHHHHhccCCCcCEEEEEeCCCC
Confidence 899999999999999 8999999999885
No 327
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=75.42 E-value=2.5 Score=34.92 Aligned_cols=27 Identities=15% Similarity=0.131 Sum_probs=25.3
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~ 27 (523)
|+|-.|...|..|.+.|++|+++|+++
T Consensus 10 G~G~vG~~la~~L~~~g~~V~vid~~~ 36 (153)
T 1id1_A 10 GHSILAINTILQLNQRGQNVTVISNLP 36 (153)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 899999999999999999999999863
No 328
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=74.80 E-value=2 Score=34.66 Aligned_cols=27 Identities=22% Similarity=0.196 Sum_probs=24.9
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~ 27 (523)
|+|..|...|..|.+.|++|++++++.
T Consensus 13 G~G~iG~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 13 GLGRFGGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp CCSHHHHHHHHHHHHTTCCCEEEESCH
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 789999999999999999999999864
No 329
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=74.70 E-value=2.6 Score=43.54 Aligned_cols=28 Identities=25% Similarity=0.254 Sum_probs=25.8
Q ss_pred CCChhHHHHHHHHHHcC-CcEEEEccCCC
Q psy893 1 EAGHNGLVSAAYLARAG-LSVAVLERRHV 28 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G-~~V~vlE~~~~ 28 (523)
|||.+|+++|.+|++.| .+|+||||...
T Consensus 13 GgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 13 GGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp SCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred CCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 89999999999999998 79999999654
No 330
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=74.61 E-value=2.1 Score=40.06 Aligned_cols=27 Identities=22% Similarity=0.279 Sum_probs=25.3
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~ 27 (523)
|+|..|.+.|..|+++|++|++++++.
T Consensus 22 G~G~mG~~iA~~la~~G~~V~~~d~~~ 48 (302)
T 1f0y_A 22 GGGLMGAGIAQVAAATGHTVVLVDQTE 48 (302)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 899999999999999999999999864
No 331
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=74.44 E-value=2 Score=43.18 Aligned_cols=27 Identities=37% Similarity=0.490 Sum_probs=25.4
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~ 27 (523)
|+|..|+..|..|+++|++|++++++.
T Consensus 15 G~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 15 GSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 899999999999999999999999864
No 332
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=74.41 E-value=2.3 Score=40.12 Aligned_cols=27 Identities=22% Similarity=0.274 Sum_probs=25.6
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~ 27 (523)
|||..|-.-|..++.+|++|+|+|.++
T Consensus 13 GaG~MG~giA~~~a~~G~~V~l~D~~~ 39 (319)
T 3ado_A 13 GSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCcHHHHHHHHHHHhCCCeEEEEECCH
Confidence 899999999999999999999999765
No 333
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=74.31 E-value=5.5 Score=37.06 Aligned_cols=57 Identities=18% Similarity=0.056 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE-eCCeEEEcCEEEEcCChHH
Q psy893 230 GAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-TNGLEIKAKYVLSNTTAKC 287 (523)
Q Consensus 230 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~~g~~~~ad~vI~a~~~~~ 287 (523)
..+.+.+.+.+.+.+.....+..|..+...+ .....|. .+|+++++|+||+|++...
T Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~g~~~~a~~liiATGs~p 117 (304)
T 4fk1_A 60 EEFKEIGLNEVMKYPSVHYYEKTVVMITKQS-TGLFEIVTKDHTKYLAERVLLATGMQE 117 (304)
T ss_dssp HHHHHHHHHHHTTSTTEEEEECCEEEEEECT-TSCEEEEETTCCEEEEEEEEECCCCEE
T ss_pred HHHHHHHHHHHHhcCCEEEEeeEEEEeeecC-CCcEEEEECCCCEEEeCEEEEccCCcc
Confidence 3566666666767776666667777777655 3334466 7888999999999999653
No 334
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=74.27 E-value=2.2 Score=36.49 Aligned_cols=27 Identities=22% Similarity=0.117 Sum_probs=25.4
Q ss_pred CCChhHHHHHHHHHHc-CCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARA-GLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~-G~~V~vlE~~~ 27 (523)
|+|..|...|..|.+. |++|+++|+++
T Consensus 46 G~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 46 GMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp CCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 8899999999999999 99999999875
No 335
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=74.10 E-value=2.3 Score=40.17 Aligned_cols=27 Identities=22% Similarity=0.274 Sum_probs=25.6
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~ 27 (523)
|+|..|.+-|..|+++|++|+++++++
T Consensus 13 GaG~MG~~iA~~la~~G~~V~l~d~~~ 39 (319)
T 2dpo_A 13 GSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred eeCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 899999999999999999999999875
No 336
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=73.88 E-value=2.3 Score=39.39 Aligned_cols=27 Identities=22% Similarity=0.153 Sum_probs=25.5
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~ 27 (523)
|+|..|...|..|+++|++|+++++++
T Consensus 11 GaG~mG~~iA~~la~~G~~V~l~d~~~ 37 (283)
T 4e12_A 11 GTGVLGSQIAFQTAFHGFAVTAYDINT 37 (283)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 899999999999999999999999865
No 337
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=73.25 E-value=8.1 Score=39.25 Aligned_cols=34 Identities=38% Similarity=0.476 Sum_probs=30.2
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC--------CCCccee
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH--------VLGGAAV 34 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~--------~~GG~~~ 34 (523)
|||.+||+||..|++.|++|+|+|+++ .+||.|.
T Consensus 39 GgGpaGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~ 80 (519)
T 3qfa_A 39 GGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCV 80 (519)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTCHHH
T ss_pred CCCHHHHHHHHHHHhCCCeEEEEeccCccccccCCCcccccC
Confidence 899999999999999999999999965 6777653
No 338
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=72.47 E-value=5 Score=36.87 Aligned_cols=56 Identities=13% Similarity=-0.005 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHHHHC-CcEEEeCceeeEEEECCCCCeEEEE-eCCeEEEcCEEEEcCChHH
Q psy893 229 MGAVSQALARSAQAS-GAQLFTSQTVTEITLDSDKRASGVV-TNGLEIKAKYVLSNTTAKC 287 (523)
Q Consensus 229 ~~~l~~~l~~~~~~~-G~~i~~~~~V~~I~~~~~~~~~~v~-~~g~~~~ad~vI~a~~~~~ 287 (523)
...+.+.+.+.+++. +++++ +++|++|..++ +. +.|+ .+|+++.+|+||+|++...
T Consensus 55 ~~~~~~~~~~~~~~~~~v~~~-~~~v~~i~~~~-~~-~~v~~~~g~~~~~d~vviAtG~~~ 112 (297)
T 3fbs_A 55 PGEIIAEARRQIERYPTIHWV-EGRVTDAKGSF-GE-FIVEIDGGRRETAGRLILAMGVTD 112 (297)
T ss_dssp HHHHHHHHHHHHTTCTTEEEE-ESCEEEEEEET-TE-EEEEETTSCEEEEEEEEECCCCEE
T ss_pred HHHHHHHHHHHHHhcCCeEEE-EeEEEEEEEcC-Ce-EEEEECCCCEEEcCEEEECCCCCC
Confidence 457788888888887 56665 55999999876 44 3466 6788899999999998753
No 339
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=71.71 E-value=3.8 Score=42.83 Aligned_cols=33 Identities=27% Similarity=0.316 Sum_probs=31.2
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCCCCcce
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHVLGGAA 33 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~ 33 (523)
|||++||+||..|+++|++|+|+|+.+..||.+
T Consensus 53 G~G~aGl~aA~~l~~~G~~V~liE~~~~~gg~~ 85 (623)
T 3pl8_A 53 GSGPIGCTYARELVGAGYKVAMFDIGEIDSGLK 85 (623)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSSCCCSSSS
T ss_pred CCcHHHHHHHHHHHhCCCcEEEEeccCCCCCcc
Confidence 899999999999999999999999999988854
No 340
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=71.44 E-value=5.3 Score=44.13 Aligned_cols=49 Identities=22% Similarity=0.299 Sum_probs=39.4
Q ss_pred HHHHHHCCcEEEeCceeeEEEEC-CCCCeEEEE-eC-------C--eEEEcCEEEEcCChH
Q psy893 237 ARSAQASGAQLFTSQTVTEITLD-SDKRASGVV-TN-------G--LEIKAKYVLSNTTAK 286 (523)
Q Consensus 237 ~~~~~~~G~~i~~~~~V~~I~~~-~~~~~~~v~-~~-------g--~~~~ad~vI~a~~~~ 286 (523)
.+.+++.|++|++++.|++|..+ + +++.+|+ .+ | +++.+|.||++++..
T Consensus 323 ~~~l~~~GV~v~~~~~v~~i~~~~~-~~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G~~ 382 (965)
T 2gag_A 323 AAQAVADGVQVISGSVVVDTEADEN-GELSAIVVAELDEARELGGTQRFEADVLAVAGGFN 382 (965)
T ss_dssp HHHHHHTTCCEEETEEEEEEEECTT-SCEEEEEEEEECTTCCEEEEEEEECSEEEEECCEE
T ss_pred HHHHHhCCeEEEeCCEeEEEeccCC-CCEEEEEEEeccccCCCCceEEEEcCEEEECCCcC
Confidence 56678899999999999999875 4 6666777 43 5 578999999998853
No 341
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=71.19 E-value=3.2 Score=38.35 Aligned_cols=28 Identities=21% Similarity=0.140 Sum_probs=25.9
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHV 28 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~ 28 (523)
|+|..|.+.|..|+++|++|++++++..
T Consensus 7 G~G~~G~~~a~~l~~~g~~V~~~~r~~~ 34 (291)
T 1ks9_A 7 GCGALGQLWLTALCKQGHEVQGWLRVPQ 34 (291)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred CcCHHHHHHHHHHHhCCCCEEEEEcCcc
Confidence 8999999999999999999999998753
No 342
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=70.92 E-value=1.2 Score=42.27 Aligned_cols=39 Identities=13% Similarity=0.223 Sum_probs=27.6
Q ss_pred CCCCCCCCeEecCCCCC-----CCCC-CC-Cc--cHHHHHHHHHHHhc
Q psy893 484 SPFTLIPHLLLCGSGAH-----PGGG-VC-GA--PGYIAAQMVNRLMR 522 (523)
Q Consensus 484 ~~~t~i~~LylaG~~~~-----pg~g-~~-~a--sG~~aA~~i~~~~~ 522 (523)
..+|.+||+|.+||.+. +.-| +- ++ ||+.||+.|++.|-
T Consensus 278 ~~~t~vpGv~aaGDaa~~v~g~~rmGp~~g~mi~SG~~AAe~I~~~la 325 (326)
T 3fpz_A 278 GAYAGVDNMYFAGMEVAELDGLNRMGPTFGAMALSGVHAAEQILKHFA 325 (326)
T ss_dssp EECTTSBTEEECTHHHHHHHTCCBCCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred CeEECCCCEEEEchHhccccCCCcCchHHHHHHHHHHHHHHHHHHHhc
Confidence 34678999999998641 2223 22 22 99999999999763
No 343
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=70.84 E-value=3.5 Score=36.17 Aligned_cols=28 Identities=18% Similarity=0.197 Sum_probs=26.1
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHV 28 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~ 28 (523)
|+|..|.+.|..|+++|++|++++++..
T Consensus 26 G~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 26 GKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 8999999999999999999999998765
No 344
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=70.75 E-value=3.1 Score=41.76 Aligned_cols=28 Identities=25% Similarity=0.290 Sum_probs=26.6
Q ss_pred CCChhHHHHHHHHHHc-CC-cEEEEccCCC
Q psy893 1 EAGHNGLVSAAYLARA-GL-SVAVLERRHV 28 (523)
Q Consensus 1 GaG~~GL~aA~~La~~-G~-~V~vlE~~~~ 28 (523)
|+|..|+..|..|+++ |+ +|++++++..
T Consensus 25 GlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 25 GMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 8999999999999999 99 9999999875
No 345
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=70.47 E-value=3.2 Score=39.05 Aligned_cols=27 Identities=44% Similarity=0.525 Sum_probs=25.4
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~ 27 (523)
|+|.-|.+.|..|+++|++|+++.++.
T Consensus 9 GaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 9 GAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp CCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred CcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 899999999999999999999999864
No 346
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=70.32 E-value=2.9 Score=41.66 Aligned_cols=27 Identities=33% Similarity=0.465 Sum_probs=25.7
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~ 27 (523)
|+|..|+..|..|+++|++|++++++.
T Consensus 9 G~G~vG~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 9 GIGYVGLVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CcCHHHHHHHHHHHhcCCEEEEEECCH
Confidence 899999999999999999999999875
No 347
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=69.92 E-value=3.3 Score=40.71 Aligned_cols=31 Identities=32% Similarity=0.372 Sum_probs=28.5
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCCCCc
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHVLGG 31 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~~GG 31 (523)
|+|..|+-+|..|++.|.+|+|+|+.+++-.
T Consensus 159 GgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~ 189 (415)
T 3lxd_A 159 GGGYIGLEAAAVLTKFGVNVTLLEALPRVLA 189 (415)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEEESSSSTTT
T ss_pred CCCHHHHHHHHHHHhcCCeEEEEecCCchhh
Confidence 8999999999999999999999999887643
No 348
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=69.92 E-value=3.2 Score=39.21 Aligned_cols=27 Identities=33% Similarity=0.466 Sum_probs=25.5
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~ 27 (523)
|+|.-|.+.|..|+++|++|+++.+++
T Consensus 9 GaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 9 GTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp SCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred CcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 899999999999999999999999865
No 349
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=69.88 E-value=3.6 Score=40.24 Aligned_cols=31 Identities=35% Similarity=0.291 Sum_probs=28.4
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCCCCc
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHVLGG 31 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~~GG 31 (523)
|+|..|+-+|..|++.|.+|+++|+.+.+..
T Consensus 149 GgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~ 179 (404)
T 3fg2_P 149 GAGFIGLEFAATARAKGLEVDVVELAPRVMA 179 (404)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSSSSTTT
T ss_pred CCCHHHHHHHHHHHhCCCEEEEEeCCCcchh
Confidence 8999999999999999999999999887643
No 350
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=67.98 E-value=9.3 Score=39.57 Aligned_cols=26 Identities=31% Similarity=0.406 Sum_probs=24.9
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERR 26 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~ 26 (523)
|||.+||+||..|++.|++|+|+|+.
T Consensus 114 G~GpAGl~aA~~l~~~g~~v~liE~~ 139 (598)
T 2x8g_A 114 GGGSGGLAAGKEAAKYGAKTAVLDYV 139 (598)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred CCCccHHHHHHHHHhCCCeEEEEecc
Confidence 89999999999999999999999983
No 351
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=67.28 E-value=3.8 Score=40.82 Aligned_cols=28 Identities=21% Similarity=0.284 Sum_probs=26.4
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHV 28 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~ 28 (523)
|+|..|...|..|+++|++|+++|+++.
T Consensus 61 GaG~MG~~IA~~la~aG~~V~l~D~~~e 88 (460)
T 3k6j_A 61 GGGTMGKAMAICFGLAGIETFLVVRNEQ 88 (460)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CCCHHHHHHHHHHHHCCCeEEEEECcHH
Confidence 8999999999999999999999999765
No 352
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=67.26 E-value=3.6 Score=40.82 Aligned_cols=27 Identities=26% Similarity=0.270 Sum_probs=25.4
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~ 27 (523)
|+|..|+..|..|+++|++|++++++.
T Consensus 7 G~G~vG~~~A~~la~~G~~V~~~d~~~ 33 (436)
T 1mv8_A 7 GLGYVGAVCAGCLSARGHEVIGVDVSS 33 (436)
T ss_dssp CCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 899999999999999999999999864
No 353
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=66.95 E-value=1.4 Score=42.27 Aligned_cols=32 Identities=25% Similarity=0.217 Sum_probs=28.7
Q ss_pred CCChhHHHHHHHHHHcC------CcEEEEccCCCCCcc
Q psy893 1 EAGHNGLVSAAYLARAG------LSVAVLERRHVLGGA 32 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G------~~V~vlE~~~~~GG~ 32 (523)
|||++||++|+.|+++| ++|+|+|++...+|.
T Consensus 7 GgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~~~~~a 44 (351)
T 3g3e_A 7 GAGVIGLSTALCIHERYHSVLQPLDIKVYADRFTPLTT 44 (351)
T ss_dssp CCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSCGGGSG
T ss_pred CCCHHHHHHHHHHHHhccccCCCceEEEEECCCCCCCc
Confidence 89999999999999998 999999998865553
No 354
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=66.28 E-value=4.1 Score=38.08 Aligned_cols=27 Identities=22% Similarity=0.304 Sum_probs=25.1
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~ 27 (523)
|+|..|.+.|..|+++|++|++++++.
T Consensus 10 G~G~~G~~~a~~l~~~g~~V~~~~r~~ 36 (316)
T 2ew2_A 10 GAGAMGSRLGIMLHQGGNDVTLIDQWP 36 (316)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CcCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 899999999999999999999999854
No 355
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=66.16 E-value=3.7 Score=40.66 Aligned_cols=27 Identities=26% Similarity=0.198 Sum_probs=25.4
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~ 27 (523)
|.|..||..|..||++|++|+.+|-+.
T Consensus 28 GlGYVGLp~A~~~A~~G~~V~g~Did~ 54 (444)
T 3vtf_A 28 GLGYVGVVHAVGFALLGHRVVGYDVNP 54 (444)
T ss_dssp CCSHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 889999999999999999999999764
No 356
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=65.98 E-value=3.8 Score=36.12 Aligned_cols=28 Identities=7% Similarity=0.095 Sum_probs=25.7
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHV 28 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~ 28 (523)
|+|..|...|..|.++|++|+++|+++.
T Consensus 7 G~G~~G~~la~~L~~~g~~v~vid~~~~ 34 (218)
T 3l4b_C 7 GGETTAYYLARSMLSRKYGVVIINKDRE 34 (218)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEESCHH
T ss_pred CCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 8899999999999999999999998653
No 357
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=65.83 E-value=4.4 Score=41.99 Aligned_cols=29 Identities=31% Similarity=0.392 Sum_probs=26.7
Q ss_pred CCChhHHHHHHHHHH-cCCcEEEEccCCCC
Q psy893 1 EAGHNGLVSAAYLAR-AGLSVAVLERRHVL 29 (523)
Q Consensus 1 GaG~~GL~aA~~La~-~G~~V~vlE~~~~~ 29 (523)
|||.+|+++|.+|++ .|.+|+|||+....
T Consensus 31 G~G~~g~~~a~~l~~~~~~~v~~~e~g~~~ 60 (587)
T 1gpe_A 31 GGGLTGLTVAAKLTENPKIKVLVIEKGFYE 60 (587)
T ss_dssp CCSHHHHHHHHHHHTSTTCCEEEEESSCCC
T ss_pred CcCHHHHHHHHHHHhCCCCcEEEEecCCcc
Confidence 899999999999999 79999999997653
No 358
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=65.64 E-value=4.5 Score=40.48 Aligned_cols=30 Identities=23% Similarity=0.197 Sum_probs=27.6
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCCCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHVLG 30 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~~G 30 (523)
|+|..|+-.|..|++.|.+|+|+|+.+++-
T Consensus 179 GgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l 208 (466)
T 3l8k_A 179 GAGYIGLEIASIFRLMGVQTHIIEMLDRAL 208 (466)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSSSSSC
T ss_pred CCCHHHHHHHHHHHHcCCEEEEEEeCCcCC
Confidence 899999999999999999999999988654
No 359
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=65.41 E-value=4.3 Score=37.80 Aligned_cols=26 Identities=23% Similarity=0.142 Sum_probs=24.4
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~ 27 (523)
|+|..|-.-|..|+ +|++|+++|+++
T Consensus 19 G~G~MG~~iA~~la-aG~~V~v~d~~~ 44 (293)
T 1zej_A 19 GAGLMGRGIAIAIA-SKHEVVLQDVSE 44 (293)
T ss_dssp CCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred eeCHHHHHHHHHHH-cCCEEEEEECCH
Confidence 89999999999999 999999999865
No 360
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=64.93 E-value=4 Score=40.89 Aligned_cols=27 Identities=33% Similarity=0.363 Sum_probs=25.5
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~ 27 (523)
|+|..|...|..|+++|++|+++|++.
T Consensus 44 GaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 44 GLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp CCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred CcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 899999999999999999999999865
No 361
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=64.38 E-value=7.1 Score=38.95 Aligned_cols=53 Identities=17% Similarity=0.155 Sum_probs=38.2
Q ss_pred HHHHHHHHHH------CCcEEEeCceeeEEEECCCCCeEEEE-e----------------CC--eEEEcCEEEEcCChHH
Q psy893 233 SQALARSAQA------SGAQLFTSQTVTEITLDSDKRASGVV-T----------------NG--LEIKAKYVLSNTTAKC 287 (523)
Q Consensus 233 ~~~l~~~~~~------~G~~i~~~~~V~~I~~~~~~~~~~v~-~----------------~g--~~~~ad~vI~a~~~~~ 287 (523)
.+.|.+.+++ .|+++++++.|.+|..+ +++.+|+ . +| +++.+|.||.+++...
T Consensus 249 ~~~l~~~~~~~~~~~~~gv~i~~~~~~~~i~~~--~~v~~v~~~~~~~~~~~~~~~~~~~~g~~~~i~~d~vi~a~G~~p 326 (456)
T 1lqt_A 249 IKVLRGYADREPRPGHRRMVFRFLTSPIEIKGK--RKVERIVLGRNELVSDGSGRVAAKDTGEREELPAQLVVRSVGYRG 326 (456)
T ss_dssp HHHHHHHHTCC-CTTSEEEEEECSEEEEEEECS--SSCCEEEEEEEEEEECSSSSEEEEEEEEEEEEECSEEEECSCEEC
T ss_pred HHHHHHHhhcCCCCCCceEEEEeCCCCeEEecC--CcEeEEEEEEEEecCCCcccccccCCCceEEEEcCEEEEcccccc
Confidence 4455565655 78999999999999854 4454454 2 34 3689999999998654
No 362
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=63.52 E-value=5 Score=38.10 Aligned_cols=26 Identities=38% Similarity=0.420 Sum_probs=24.7
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERR 26 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~ 26 (523)
|+|..|.+.|..|+++|++|++++++
T Consensus 21 G~G~mG~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 21 GAGSWGTVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 89999999999999999999999885
No 363
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=63.49 E-value=5.3 Score=38.93 Aligned_cols=28 Identities=32% Similarity=0.354 Sum_probs=26.0
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHV 28 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~ 28 (523)
|+|..|+.+|..|...|.+|+++|++..
T Consensus 197 G~G~iG~~aa~~a~~lGa~V~v~D~~~~ 224 (405)
T 4dio_A 197 GAGVAGLQAIATARRLGAVVSATDVRPA 224 (405)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSSTT
T ss_pred CCcHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 8999999999999999999999998764
No 364
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=63.35 E-value=4.8 Score=37.75 Aligned_cols=28 Identities=25% Similarity=0.305 Sum_probs=25.9
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHV 28 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~ 28 (523)
|.|..|...|..|+++|++|++++++..
T Consensus 28 G~G~mG~~~A~~l~~~G~~V~~~dr~~~ 55 (310)
T 3doj_A 28 GLGIMGKAMSMNLLKNGFKVTVWNRTLS 55 (310)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred CccHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 8999999999999999999999998753
No 365
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=63.15 E-value=5 Score=37.13 Aligned_cols=28 Identities=32% Similarity=0.350 Sum_probs=25.9
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHV 28 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~ 28 (523)
|.|..|...|..|+++|++|++++++..
T Consensus 8 G~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pef_A 8 GLGIMGSAMAKNLVKAGCSVTIWNRSPE 35 (287)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred eecHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 8999999999999999999999998753
No 366
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=63.10 E-value=4.5 Score=37.41 Aligned_cols=28 Identities=39% Similarity=0.412 Sum_probs=25.9
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHV 28 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~ 28 (523)
|.|..|...|..|+++|++|++++++..
T Consensus 8 G~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pdu_A 8 GLGIMGGPMAANLVRAGFDVTVWNRNPA 35 (287)
T ss_dssp CCSTTHHHHHHHHHHHTCCEEEECSSGG
T ss_pred ccCHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 8999999999999999999999998753
No 367
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=62.93 E-value=5.1 Score=38.09 Aligned_cols=26 Identities=42% Similarity=0.395 Sum_probs=24.6
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERR 26 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~ 26 (523)
|+|..|.+.|..|+++|++|+++++.
T Consensus 10 GaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 10 GAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp SCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 89999999999999999999999974
No 368
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=62.87 E-value=5.4 Score=35.92 Aligned_cols=27 Identities=30% Similarity=0.289 Sum_probs=25.2
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~ 27 (523)
|+|..|.+.|..|+++|++|++++++.
T Consensus 26 G~G~mG~alA~~L~~~G~~V~~~~r~~ 52 (245)
T 3dtt_A 26 GTGTVGRTMAGALADLGHEVTIGTRDP 52 (245)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 899999999999999999999999864
No 369
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=62.55 E-value=4.4 Score=37.72 Aligned_cols=28 Identities=21% Similarity=0.120 Sum_probs=26.1
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHV 28 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~ 28 (523)
|.|..|...|..|+++|++|++++++..
T Consensus 22 G~G~mG~~~A~~l~~~G~~V~~~dr~~~ 49 (296)
T 3qha_A 22 GLGNMGAPMATRMTEWPGGVTVYDIRIE 49 (296)
T ss_dssp CCSTTHHHHHHHHTTSTTCEEEECSSTT
T ss_pred CcCHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 8899999999999999999999998764
No 370
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=62.25 E-value=14 Score=38.86 Aligned_cols=50 Identities=14% Similarity=0.113 Sum_probs=37.6
Q ss_pred HHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEEeCC--eEEEcCEEEEcCChHH
Q psy893 234 QALARSAQASGAQLFTSQTVTEITLDSDKRASGVVTNG--LEIKAKYVLSNTTAKC 287 (523)
Q Consensus 234 ~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~~~g--~~~~ad~vI~a~~~~~ 287 (523)
..+.+.+++.|++++++++|++|.. +.+ .++.+| +++.+|.||++++...
T Consensus 577 ~~~~~~l~~~GV~v~~~~~v~~i~~---~~v-~~~~~G~~~~i~~D~Vi~a~G~~p 628 (671)
T 1ps9_A 577 WIHRTTLLSRGVKMIPGVSYQKIDD---DGL-HVVINGETQVLAVDNVVICAGQEP 628 (671)
T ss_dssp HHHHHHHHHTTCEEECSCEEEEEET---TEE-EEEETTEEEEECCSEEEECCCEEE
T ss_pred HHHHHHHHhcCCEEEeCcEEEEEeC---CeE-EEecCCeEEEEeCCEEEECCCccc
Confidence 4456778899999999999999972 222 232566 5789999999988653
No 371
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=62.11 E-value=4.4 Score=37.66 Aligned_cols=27 Identities=19% Similarity=0.156 Sum_probs=25.2
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~ 27 (523)
|+|.-|.+.|..|+++|++|+++.|+.
T Consensus 9 GaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 9 GPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp CCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred CCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 899999999999999999999999874
No 372
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=61.61 E-value=5.7 Score=39.93 Aligned_cols=27 Identities=22% Similarity=0.180 Sum_probs=25.5
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~ 27 (523)
|+|..|...|..|+++|++|+++|++.
T Consensus 12 GaG~MG~~IA~~la~aG~~V~l~D~~~ 38 (483)
T 3mog_A 12 GSGTMGAGIAEVAASHGHQVLLYDISA 38 (483)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CcCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 899999999999999999999999875
No 373
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=61.21 E-value=5.9 Score=36.98 Aligned_cols=27 Identities=30% Similarity=0.225 Sum_probs=25.3
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~ 27 (523)
|.|..|.+.|..|+++|++|++++++.
T Consensus 14 G~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 14 GLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 899999999999999999999999864
No 374
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=61.11 E-value=5.2 Score=38.64 Aligned_cols=27 Identities=30% Similarity=0.391 Sum_probs=25.5
Q ss_pred CCChhHHHHHHHHHHcCC-cEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGL-SVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~-~V~vlE~~~ 27 (523)
|||.+|+.+|..|...|. +|+++|++.
T Consensus 195 GAGaAG~~iA~ll~~~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 195 GGGSAGLSITRKLLAAGATKVTVVDKFG 222 (398)
T ss_dssp CCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred CCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 899999999999999998 999999974
No 375
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=59.82 E-value=6.5 Score=40.25 Aligned_cols=34 Identities=29% Similarity=0.426 Sum_probs=32.3
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCCCCccee
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHVLGGAAV 34 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~ 34 (523)
|||++||+||..|++.|++|+|+|+++.+||...
T Consensus 16 GaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~ 49 (545)
T 3uox_A 16 GAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWY 49 (545)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHH
T ss_pred CccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccc
Confidence 8999999999999999999999999999999764
No 376
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=59.75 E-value=6 Score=37.98 Aligned_cols=27 Identities=33% Similarity=0.324 Sum_probs=25.3
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~ 27 (523)
|+|.-|.+.|..|+++|++|+++++++
T Consensus 36 GaG~mG~alA~~La~~G~~V~l~~r~~ 62 (356)
T 3k96_A 36 GAGSWGTALALVLARKGQKVRLWSYES 62 (356)
T ss_dssp CCSHHHHHHHHHHHTTTCCEEEECSCH
T ss_pred CccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 899999999999999999999999864
No 377
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=59.56 E-value=5.5 Score=39.28 Aligned_cols=26 Identities=23% Similarity=0.330 Sum_probs=24.3
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~ 27 (523)
|+|..|+..|..|++ |++|++++++.
T Consensus 43 GlG~mG~~lA~~La~-G~~V~~~D~~~ 68 (432)
T 3pid_A 43 GTGYVGLSNGVLIAQ-NHEVVALDIVQ 68 (432)
T ss_dssp CCSHHHHHHHHHHHT-TSEEEEECSCH
T ss_pred CcCHHHHHHHHHHHc-CCeEEEEecCH
Confidence 899999999999998 99999999875
No 378
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=58.88 E-value=18 Score=40.11 Aligned_cols=47 Identities=17% Similarity=0.259 Sum_probs=36.6
Q ss_pred HHHHHCCcEEEeCceeeEEEECCCCCeEEEE-e------CC---------eEEEcCEEEEcCCh
Q psy893 238 RSAQASGAQLFTSQTVTEITLDSDKRASGVV-T------NG---------LEIKAKYVLSNTTA 285 (523)
Q Consensus 238 ~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~-~------~g---------~~~~ad~vI~a~~~ 285 (523)
+.+++.|+++++++.+.+|..++ +++++|+ . +| .++.||.||++++.
T Consensus 378 ~~~~~~Gv~~~~~~~~~~i~~~~-g~v~~v~~~~~~~~~~g~~~~~~g~~~~i~aD~Vi~A~G~ 440 (1025)
T 1gte_A 378 ELAKEEKCEFLPFLSPRKVIVKG-GRIVAVQFVRTEQDETGKWNEDEDQIVHLKADVVISAFGS 440 (1025)
T ss_dssp HHHHHTTCEEECSEEEEEEEEET-TEEEEEEEEEEEECTTSCEEEEEEEEEEEECSEEEECSCE
T ss_pred HHHHHcCCEEEeCCCceEEEccC-CeEEEEEEEEeEEcCCCCcccCCCceEEEECCEEEECCCC
Confidence 56678899999999999998765 7776664 2 22 36899999999875
No 379
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=58.67 E-value=6.7 Score=36.94 Aligned_cols=26 Identities=38% Similarity=0.471 Sum_probs=23.9
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~ 27 (523)
|+|.-|.+.|..|+++|++|+++ +++
T Consensus 26 GaGa~G~~~a~~L~~~G~~V~l~-~~~ 51 (318)
T 3hwr_A 26 GAGAVGCYYGGMLARAGHEVILI-ARP 51 (318)
T ss_dssp SCSHHHHHHHHHHHHTTCEEEEE-CCH
T ss_pred CcCHHHHHHHHHHHHCCCeEEEE-EcH
Confidence 89999999999999999999999 653
No 380
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=58.59 E-value=6.7 Score=37.44 Aligned_cols=27 Identities=37% Similarity=0.404 Sum_probs=24.9
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~ 27 (523)
|+|..|...|..|+++|++|++++++.
T Consensus 11 G~G~~G~~~a~~L~~~g~~V~~~~r~~ 37 (359)
T 1bg6_A 11 GLGNGGHAFAAYLALKGQSVLAWDIDA 37 (359)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 899999999999999999999998753
No 381
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=58.43 E-value=5.7 Score=37.57 Aligned_cols=25 Identities=24% Similarity=0.233 Sum_probs=24.1
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEcc
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLER 25 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~ 25 (523)
|+|..|.+.|..|+++|++|+++++
T Consensus 7 G~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 7 GAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp SCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred CcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 8999999999999999999999998
No 382
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=58.07 E-value=7 Score=36.84 Aligned_cols=27 Identities=33% Similarity=0.433 Sum_probs=25.3
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~ 27 (523)
|.|..|...|..|+++|++|++++++.
T Consensus 38 G~G~mG~~~a~~l~~~G~~V~~~dr~~ 64 (320)
T 4dll_A 38 GTGSMGLPMARRLCEAGYALQVWNRTP 64 (320)
T ss_dssp CCTTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CccHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 889999999999999999999999864
No 383
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=57.99 E-value=6 Score=38.19 Aligned_cols=27 Identities=26% Similarity=0.275 Sum_probs=25.3
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~ 27 (523)
|+|..|+.+|..|...|.+|++++++.
T Consensus 191 G~G~iG~~aa~~a~~lGa~V~v~D~~~ 217 (381)
T 3p2y_A 191 GVGVAGLQALATAKRLGAKTTGYDVRP 217 (381)
T ss_dssp SCSHHHHHHHHHHHHHTCEEEEECSSG
T ss_pred CchHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 899999999999999999999999875
No 384
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=56.78 E-value=6.6 Score=41.87 Aligned_cols=49 Identities=10% Similarity=0.125 Sum_probs=35.5
Q ss_pred HHHHHHHHHCCcEEEeCceeeEEEECCCCCeEEEE---eCC-eE------------------EEcCEEEEcCChH
Q psy893 234 QALARSAQASGAQLFTSQTVTEITLDSDKRASGVV---TNG-LE------------------IKAKYVLSNTTAK 286 (523)
Q Consensus 234 ~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~~~v~---~~g-~~------------------~~ad~vI~a~~~~ 286 (523)
..+.+.+++.|+++++++.|++|..+ + +. +. .++ ++ +.+|.||++++..
T Consensus 575 ~~~~~~l~~~GV~i~~~~~v~~i~~~--~-v~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~~ 645 (729)
T 1o94_A 575 PNMMRRLHELHVEELGDHFCSRIEPG--R-ME-IYNIWGDGSKRTYRGPGVSPRDANTSHRWIEFDSLVLVTGRH 645 (729)
T ss_dssp HHHHHHHHHTTCEEECSEEEEEEETT--E-EE-EEETTCSCSCCCCCCTTSCSSCCCCCCEEEECSEEEEESCEE
T ss_pred HHHHHHHHhCCCEEEcCcEEEEEECC--e-EE-EEEecCCceEEecccccccccccCCcceeeeCCEEEECCCCC
Confidence 45667788999999999999999732 2 22 22 233 22 8999999998854
No 385
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=56.65 E-value=16 Score=38.29 Aligned_cols=64 Identities=13% Similarity=0.187 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHHHCC---cEEEeCceeeEEEECC-------CCCeEEEE-e-----------------------------
Q psy893 230 GAVSQALARSAQASG---AQLFTSQTVTEITLDS-------DKRASGVV-T----------------------------- 269 (523)
Q Consensus 230 ~~l~~~l~~~~~~~G---~~i~~~~~V~~I~~~~-------~~~~~~v~-~----------------------------- 269 (523)
..+-+.|.+.+++.| ++|++++.|+++..++ +..+ .|+ .
T Consensus 119 ~~le~~L~~~~~~~g~~~v~v~~g~~v~~~~~d~~~~~~~~~~~V-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 197 (665)
T 1pn0_A 119 GRIERRILDSIAEISDTRIKVERPLIPEKMEIDSSKAEDPEAYPV-TMTLRYMSEDESTPLQFGHKTENGLFRSNLQTQE 197 (665)
T ss_dssp HHHHHHHHHHHHHHHTTSSCEECSEEEEEEEECGGGTTCTTCCCE-EEEEEECCGGGSCCCTTCCCCCSSSCCCHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCceEEEeCCEEEEEEecCcccccCCCCCE-EEEEEecccccccccccccccccccccccccccc
Confidence 467778888888877 8999999999998864 1233 343 2
Q ss_pred -------------CC--eEEEcCEEEEcCChHHHHHhhCC
Q psy893 270 -------------NG--LEIKAKYVLSNTTAKCTLLDLIP 294 (523)
Q Consensus 270 -------------~g--~~~~ad~vI~a~~~~~~~~~ll~ 294 (523)
+| ++++||.||-|-+.+...++.+.
T Consensus 198 ~~d~~~~~~~~~~~G~~~~i~A~~VVGADG~~S~VR~~lg 237 (665)
T 1pn0_A 198 EEDANYRLPEGKEAGEIETVHCKYVIGCDGGHSWVRRTLG 237 (665)
T ss_dssp HHHTSCCCSTTCCTTCEEEEEEEEEEECCCTTCHHHHHHT
T ss_pred cccccccccccCCCCceEEEEeCEEEeccCCCCHHHHhcC
Confidence 35 57899999999998877777764
No 386
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=56.57 E-value=7.8 Score=36.04 Aligned_cols=27 Identities=30% Similarity=0.386 Sum_probs=25.3
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~ 27 (523)
|+|..|...|..|+++|++|++++++.
T Consensus 10 G~G~mG~~~a~~l~~~G~~V~~~d~~~ 36 (302)
T 2h78_A 10 GLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (302)
T ss_dssp CCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred eecHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 899999999999999999999999864
No 387
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=56.53 E-value=7.4 Score=33.90 Aligned_cols=27 Identities=33% Similarity=0.313 Sum_probs=24.0
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~ 27 (523)
|+|..|...|..|+++|++|++++++.
T Consensus 8 a~G~~G~~ia~~l~~~g~~V~~~~r~~ 34 (212)
T 1jay_A 8 GTGNLGKGLALRLATLGHEIVVGSRRE 34 (212)
T ss_dssp TTSHHHHHHHHHHHTTTCEEEEEESSH
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 289999999999999999999998753
No 388
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=56.16 E-value=5.7 Score=38.87 Aligned_cols=26 Identities=19% Similarity=0.202 Sum_probs=24.3
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~ 27 (523)
|+|..|+..|..|++ |++|++++++.
T Consensus 7 G~G~vG~~~A~~La~-G~~V~~~d~~~ 32 (402)
T 1dlj_A 7 GSGYVGLSLGVLLSL-QNEVTIVDILP 32 (402)
T ss_dssp CCSHHHHHHHHHHTT-TSEEEEECSCH
T ss_pred CCCHHHHHHHHHHhC-CCEEEEEECCH
Confidence 899999999999999 99999999864
No 389
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=55.82 E-value=8.2 Score=36.21 Aligned_cols=27 Identities=22% Similarity=0.245 Sum_probs=25.2
Q ss_pred CCChhHHHHHHHHHHcCC--cEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGL--SVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~--~V~vlE~~~ 27 (523)
|+|..|.+.|..|+++|+ +|++++++.
T Consensus 14 GaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 14 GAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp CCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 899999999999999999 999999864
No 390
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=55.62 E-value=8.8 Score=36.33 Aligned_cols=27 Identities=26% Similarity=0.295 Sum_probs=25.5
Q ss_pred CCChhHHHHHHHHHHcCC-cEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGL-SVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~-~V~vlE~~~ 27 (523)
|||..|.+.|..|+++|+ +|+++|.+.
T Consensus 21 GaG~vG~~iA~~la~~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 21 GAGQIGSTIALLLGQKDLGDVYMFDIIE 48 (328)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEEECSST
T ss_pred CCCHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 899999999999999999 999999875
No 391
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=55.48 E-value=8.9 Score=35.82 Aligned_cols=27 Identities=30% Similarity=0.394 Sum_probs=25.2
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~ 27 (523)
|.|..|...|..|+++|++|++++++.
T Consensus 16 G~G~mG~~~A~~l~~~G~~V~~~dr~~ 42 (306)
T 3l6d_A 16 GLGAMGTIMAQVLLKQGKRVAIWNRSP 42 (306)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 889999999999999999999999865
No 392
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=55.44 E-value=18 Score=36.37 Aligned_cols=56 Identities=13% Similarity=0.006 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHHCCcEEEeCceeeEEEECCCC------CeEEEE-eCC-----eEEEcCEEEEcCCh
Q psy893 230 GAVSQALARSAQASGAQLFTSQTVTEITLDSDK------RASGVV-TNG-----LEIKAKYVLSNTTA 285 (523)
Q Consensus 230 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~------~~~~v~-~~g-----~~~~ad~vI~a~~~ 285 (523)
.++.+-|...+++.+..|+++++|++|+..+++ ..+.|+ .++ +++.|++||++++.
T Consensus 145 ~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar~vVlatG~ 212 (501)
T 4b63_A 145 LEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRTRKVVIAIGG 212 (501)
T ss_dssp HHHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEEEEEEECCCC
T ss_pred HHHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEEeCEEEECcCC
Confidence 356666666666667789999999999875422 134555 333 36889999999984
No 393
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=55.39 E-value=6.8 Score=40.04 Aligned_cols=44 Identities=16% Similarity=0.234 Sum_probs=34.6
Q ss_pred HHHHHCCcEEEe--CceeeEEEECCCCCeEEEE-eCCeEEEcCEEEEcCChHH
Q psy893 238 RSAQASGAQLFT--SQTVTEITLDSDKRASGVV-TNGLEIKAKYVLSNTTAKC 287 (523)
Q Consensus 238 ~~~~~~G~~i~~--~~~V~~I~~~~~~~~~~v~-~~g~~~~ad~vI~a~~~~~ 287 (523)
+.+.+.++++.. +++|++|..+ +|+ .||+++++|.||+|++...
T Consensus 338 ~~l~~~nV~lv~~~~~~I~~it~~------gv~~~dG~~~~~DvIV~ATGf~~ 384 (540)
T 3gwf_A 338 EVYNRPNVEAVAIKENPIREVTAK------GVVTEDGVLHELDVLVFATGFDA 384 (540)
T ss_dssp GGGGSTTEEEEETTTSCEEEECSS------EEEETTCCEEECSEEEECCCBSC
T ss_pred HHhcCCCEEEEeCCCCCccEEecC------eEEcCCCCEEECCEEEECCccCc
Confidence 445566789886 7889998642 477 8998999999999999764
No 394
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=55.28 E-value=8.8 Score=35.12 Aligned_cols=27 Identities=19% Similarity=0.067 Sum_probs=24.5
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~ 27 (523)
|+|-.|.++|..|++.|.+|+|+.|+.
T Consensus 126 GaGg~g~a~a~~L~~~G~~V~v~~R~~ 152 (271)
T 1nyt_A 126 GAGGASRGVLLPLLSLDCAVTITNRTV 152 (271)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCcHHHHHHHHHHHHcCCEEEEEECCH
Confidence 788899999999999999999998763
No 395
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=55.07 E-value=9.6 Score=33.43 Aligned_cols=27 Identities=26% Similarity=0.250 Sum_probs=24.8
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~ 27 (523)
|+|..|.+.|..|++.|++|++++++.
T Consensus 35 G~G~~G~~la~~l~~~g~~V~~~~r~~ 61 (215)
T 2vns_A 35 GSGDFARSLATRLVGSGFKVVVGSRNP 61 (215)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEEESSH
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 889999999999999999999999864
No 396
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=54.86 E-value=8.1 Score=36.64 Aligned_cols=27 Identities=19% Similarity=0.105 Sum_probs=25.4
Q ss_pred CCChhHHHHHHHHHHcCC-cEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGL-SVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~-~V~vlE~~~ 27 (523)
|||..|.+.|..|++.|+ +|+++|.+.
T Consensus 16 GaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 16 GSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp CCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 899999999999999998 999999875
No 397
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=54.82 E-value=6.9 Score=36.44 Aligned_cols=28 Identities=29% Similarity=0.321 Sum_probs=22.0
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHV 28 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~ 28 (523)
|-|..|..-|..|+++||+|++++++..
T Consensus 12 GLG~MG~~mA~~L~~~G~~V~v~dr~~~ 39 (297)
T 4gbj_A 12 GLGNLGTPIAEILLEAGYELVVWNRTAS 39 (297)
T ss_dssp CCSTTHHHHHHHHHHTTCEEEEC-----
T ss_pred ecHHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 6799999999999999999999998654
No 398
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=54.59 E-value=7.6 Score=41.26 Aligned_cols=27 Identities=22% Similarity=0.124 Sum_probs=25.5
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~ 27 (523)
|+|..|...|..|+++|++|+++|++.
T Consensus 319 GaG~MG~~iA~~la~aG~~V~l~D~~~ 345 (725)
T 2wtb_A 319 GGGLMGSGIATALILSNYPVILKEVNE 345 (725)
T ss_dssp CCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred cCCHhhHHHHHHHHhCCCEEEEEECCH
Confidence 899999999999999999999999864
No 399
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=54.49 E-value=8.2 Score=36.28 Aligned_cols=27 Identities=19% Similarity=0.249 Sum_probs=25.3
Q ss_pred CCChhHHHHHHHHHHcCC-cEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGL-SVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~-~V~vlE~~~ 27 (523)
|+|..|.+.|..|+++|+ +|+++|++.
T Consensus 11 GaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 11 GSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 899999999999999998 999999875
No 400
>3d3k_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.20A {Homo sapiens}
Probab=54.23 E-value=8.9 Score=34.88 Aligned_cols=18 Identities=22% Similarity=0.383 Sum_probs=16.9
Q ss_pred HHHHHHHHHHcCCcEEEE
Q psy893 6 GLVSAAYLARAGLSVAVL 23 (523)
Q Consensus 6 GL~aA~~La~~G~~V~vl 23 (523)
||.+|.+|+++|++|.|+
T Consensus 101 Glv~AR~L~~~G~~V~v~ 118 (259)
T 3d3k_A 101 GISCGRHLANHDVQVILF 118 (259)
T ss_dssp HHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHCCCeEEEE
Confidence 599999999999999997
No 401
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=53.96 E-value=8.1 Score=37.23 Aligned_cols=26 Identities=23% Similarity=0.480 Sum_probs=24.8
Q ss_pred CCChhHHHHHHHHHHcCC-cEEEEccC
Q psy893 1 EAGHNGLVSAAYLARAGL-SVAVLERR 26 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~-~V~vlE~~ 26 (523)
|||.+|..+|..|...|. +|+|++++
T Consensus 199 GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 199 GIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp CCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 899999999999999998 89999997
No 402
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=53.81 E-value=8 Score=39.62 Aligned_cols=28 Identities=21% Similarity=0.328 Sum_probs=26.8
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHV 28 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~ 28 (523)
|+|.+|+-+|..|++.|.+|+|+++.+.
T Consensus 198 G~G~sgve~a~~l~~~~~~Vtv~~r~~~ 225 (549)
T 4ap3_A 198 GTGSSGIQSIPIIAEQAEQLFVFQRSAN 225 (549)
T ss_dssp CCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred CCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 8999999999999999999999999876
No 403
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=53.27 E-value=7.9 Score=36.42 Aligned_cols=27 Identities=19% Similarity=0.124 Sum_probs=25.5
Q ss_pred CCChhHHHHHHHHHHcC-CcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAG-LSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G-~~V~vlE~~~ 27 (523)
|.|..|.+.|..|+++| ++|++++++.
T Consensus 31 G~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 31 GFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp CCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred CccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 89999999999999999 9999999875
No 404
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=53.17 E-value=9.5 Score=35.47 Aligned_cols=27 Identities=30% Similarity=0.524 Sum_probs=24.8
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~ 27 (523)
|+|..|.+.|..|+++|++|++++++.
T Consensus 29 g~G~mG~~la~~l~~~G~~V~~~~~~~ 55 (298)
T 2pv7_A 29 GYGKLGGLFARYLRASGYPISILDRED 55 (298)
T ss_dssp TTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred CCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence 399999999999999999999999865
No 405
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=52.48 E-value=5.4 Score=38.37 Aligned_cols=27 Identities=22% Similarity=0.203 Sum_probs=25.0
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~ 27 (523)
|+|..|.+.|..|+++|++|++++++.
T Consensus 22 G~G~mG~~la~~L~~~G~~V~~~~r~~ 48 (366)
T 1evy_A 22 GSGAFGTALAMVLSKKCREVCVWHMNE 48 (366)
T ss_dssp CCSHHHHHHHHHHTTTEEEEEEECSCH
T ss_pred CCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 899999999999999999999998763
No 406
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=52.42 E-value=8.2 Score=38.77 Aligned_cols=27 Identities=26% Similarity=0.333 Sum_probs=24.7
Q ss_pred CCChhHHHHHHHHHHc--CCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARA--GLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~--G~~V~vlE~~~ 27 (523)
|.|..|+..|..|+++ |++|++++++.
T Consensus 16 G~G~vG~~~A~~La~~g~g~~V~~~D~~~ 44 (481)
T 2o3j_A 16 GAGYVGGPTCAMIAHKCPHITVTVVDMNT 44 (481)
T ss_dssp CCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred CCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 8999999999999998 79999999764
No 407
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=52.42 E-value=9.3 Score=37.34 Aligned_cols=27 Identities=26% Similarity=0.334 Sum_probs=25.0
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~ 27 (523)
|+|..|+.+|..|...|.+|++++++.
T Consensus 179 GaG~iG~~aa~~a~~~Ga~V~v~D~~~ 205 (401)
T 1x13_A 179 GAGVAGLAAIGAANSLGAIVRAFDTRP 205 (401)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSCG
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 899999999999999999999999864
No 408
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=51.92 E-value=10 Score=36.34 Aligned_cols=27 Identities=19% Similarity=0.195 Sum_probs=25.3
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~ 27 (523)
|.|..|...|..|+++|++|++++++.
T Consensus 29 GlG~mG~~~A~~L~~~G~~V~v~dr~~ 55 (358)
T 4e21_A 29 GLGRMGADMVRRLRKGGHECVVYDLNV 55 (358)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 889999999999999999999999865
No 409
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=51.87 E-value=9.8 Score=35.56 Aligned_cols=26 Identities=38% Similarity=0.547 Sum_probs=24.0
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~ 27 (523)
|+|..|.+.|..|+ +|++|+++.++.
T Consensus 9 GaGa~G~~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 9 GGGSVGLLCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp CCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCCHHHHHHHHHHh-cCCceEEEECCH
Confidence 89999999999999 999999999864
No 410
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=51.31 E-value=11 Score=35.18 Aligned_cols=27 Identities=22% Similarity=0.330 Sum_probs=25.2
Q ss_pred CCChhHHHHHHHHHHcCC--cEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGL--SVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~--~V~vlE~~~ 27 (523)
|+|..|.+.|..|+.+|+ +|+++|.+.
T Consensus 7 GaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 7 GTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp CCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 899999999999999999 999999864
No 411
>3d3j_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.80A {Homo sapiens}
Probab=51.31 E-value=10 Score=35.41 Aligned_cols=18 Identities=22% Similarity=0.383 Sum_probs=16.9
Q ss_pred HHHHHHHHHHcCCcEEEE
Q psy893 6 GLVSAAYLARAGLSVAVL 23 (523)
Q Consensus 6 GL~aA~~La~~G~~V~vl 23 (523)
||++|.+|+.+|++|.|+
T Consensus 148 Glv~AR~L~~~G~~V~V~ 165 (306)
T 3d3j_A 148 GISCGRHLANHDVQVILF 165 (306)
T ss_dssp HHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHCCCcEEEE
Confidence 599999999999999997
No 412
>1jzt_A Hypothetical 27.5 kDa protein in SPX19-GCR2 inter region; yeast hypothetical protein, structural genomics, selenomethi PSI; 1.94A {Saccharomyces cerevisiae} SCOP: c.104.1.1
Probab=51.23 E-value=9.2 Score=34.46 Aligned_cols=19 Identities=37% Similarity=0.375 Sum_probs=17.4
Q ss_pred HHHHHHHHHHcCCcEEEEc
Q psy893 6 GLVSAAYLARAGLSVAVLE 24 (523)
Q Consensus 6 GL~aA~~La~~G~~V~vlE 24 (523)
|+.+|.+|+++|++|.|+=
T Consensus 74 Glv~AR~L~~~G~~V~v~~ 92 (246)
T 1jzt_A 74 GLVCARHLKLFGYNPVVFY 92 (246)
T ss_dssp HHHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHHHHCCCeEEEEE
Confidence 5999999999999999973
No 413
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=50.99 E-value=9.7 Score=35.67 Aligned_cols=27 Identities=22% Similarity=0.229 Sum_probs=25.2
Q ss_pred CCChhHHHHHHHHHHcCC-cEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGL-SVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~-~V~vlE~~~ 27 (523)
|.|..|.+.|..|+++|+ +|++++++.
T Consensus 31 G~G~mG~~~A~~L~~~G~~~V~~~dr~~ 58 (312)
T 3qsg_A 31 GFGEAASAIASGLRQAGAIDMAAYDAAS 58 (312)
T ss_dssp CCSHHHHHHHHHHHHHSCCEEEEECSSC
T ss_pred CccHHHHHHHHHHHHCCCCeEEEEcCCC
Confidence 899999999999999999 999999863
No 414
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=50.92 E-value=9.2 Score=38.54 Aligned_cols=27 Identities=22% Similarity=0.249 Sum_probs=23.5
Q ss_pred CCChhHHH-HHHHHHHcCCcEEEEccCC
Q psy893 1 EAGHNGLV-SAAYLARAGLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~-aA~~La~~G~~V~vlE~~~ 27 (523)
|.|-+|++ +|..|.++|++|++.|...
T Consensus 29 GiG~sG~s~~A~~l~~~G~~V~~~D~~~ 56 (494)
T 4hv4_A 29 GIGGAGMGGIAEVLANEGYQISGSDLAP 56 (494)
T ss_dssp TTTSTTHHHHHHHHHHTTCEEEEECSSC
T ss_pred EEcHhhHHHHHHHHHhCCCeEEEEECCC
Confidence 67888997 5999999999999999864
No 415
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=50.74 E-value=11 Score=37.87 Aligned_cols=27 Identities=19% Similarity=0.155 Sum_probs=25.4
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~ 27 (523)
|.|..|.+.|..|+++|++|++++++.
T Consensus 17 GlG~MG~~lA~~La~~G~~V~v~dr~~ 43 (497)
T 2p4q_A 17 GLAVMGQNLILNAADHGFTVCAYNRTQ 43 (497)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred eeHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 899999999999999999999999865
No 416
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=50.73 E-value=11 Score=36.25 Aligned_cols=27 Identities=19% Similarity=0.219 Sum_probs=25.0
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~ 27 (523)
|+|..|+.++..|...|.+|++++++.
T Consensus 174 GaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 174 GGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 899999999999999999999999864
No 417
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=50.65 E-value=11 Score=36.48 Aligned_cols=28 Identities=29% Similarity=0.311 Sum_probs=25.5
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHV 28 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~ 28 (523)
|+|..|+.+|..|...|.+|++++++..
T Consensus 179 GaG~iG~~aa~~a~~~Ga~V~~~d~~~~ 206 (384)
T 1l7d_A 179 GVGVAGLQAIATAKRLGAVVMATDVRAA 206 (384)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 8999999999999999999999998653
No 418
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=50.62 E-value=11 Score=36.37 Aligned_cols=27 Identities=26% Similarity=0.358 Sum_probs=25.0
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~ 27 (523)
|+|..|+.+|..|+..|.+|++++++.
T Consensus 173 GaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 173 GGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 789999999999999999999999864
No 419
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=50.57 E-value=8.9 Score=40.69 Aligned_cols=27 Identities=22% Similarity=0.091 Sum_probs=25.5
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~ 27 (523)
|+|..|...|..|+++|++|+++|++.
T Consensus 321 GaG~MG~~iA~~la~aG~~V~l~D~~~ 347 (715)
T 1wdk_A 321 GAGIMGGGIAYQSASKGTPILMKDINE 347 (715)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCChhhHHHHHHHHhCCCEEEEEECCH
Confidence 899999999999999999999999875
No 420
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=50.53 E-value=17 Score=32.97 Aligned_cols=32 Identities=16% Similarity=-0.011 Sum_probs=26.6
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCCCCcc
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHVLGGA 32 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~ 32 (523)
|+|-.|...|..|+++|++|+++.++...++.
T Consensus 16 as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~ 47 (264)
T 2dtx_A 16 ASMGIGRAIAERFVDEGSKVIDLSIHDPGEAK 47 (264)
T ss_dssp CSSHHHHHHHHHHHHTTCEEEEEESSCCCSCS
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEecCcccCCc
Confidence 56778999999999999999999987654433
No 421
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=50.48 E-value=12 Score=34.48 Aligned_cols=27 Identities=19% Similarity=0.215 Sum_probs=25.0
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~ 27 (523)
|+|..|...|..|+++|++|++++++.
T Consensus 7 G~G~mG~~~a~~l~~~g~~V~~~~~~~ 33 (296)
T 2gf2_A 7 GLGNMGNPMAKNLMKHGYPLIIYDVFP 33 (296)
T ss_dssp CCSTTHHHHHHHHHHTTCCEEEECSST
T ss_pred eccHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 889999999999999999999999865
No 422
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=50.45 E-value=7.5 Score=37.15 Aligned_cols=31 Identities=42% Similarity=0.413 Sum_probs=28.2
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCCCCc
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHVLGG 31 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~~GG 31 (523)
|||++|+++|+.|+++|++|+|+||+...+|
T Consensus 13 G~Gi~Gls~A~~La~~G~~V~vle~~~~~~g 43 (363)
T 1c0p_A 13 GSGVIGLSSALILARKGYSVHILARDLPEDV 43 (363)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEEESSCTTCT
T ss_pred CCCHHHHHHHHHHHhCCCEEEEEeccCCCCc
Confidence 8999999999999999999999999875444
No 423
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=50.26 E-value=11 Score=35.97 Aligned_cols=28 Identities=18% Similarity=0.331 Sum_probs=25.4
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHV 28 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~ 28 (523)
|||..|..+|+.+.+.|++|++++.++.
T Consensus 8 Ggg~~g~~~~~~Ak~~G~~vv~vd~~~~ 35 (363)
T 4ffl_A 8 GGKLQGFEAAYLSKKAGMKVVLVDKNPQ 35 (363)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 8999999999999999999999998654
No 424
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=50.22 E-value=13 Score=33.71 Aligned_cols=28 Identities=25% Similarity=0.208 Sum_probs=24.4
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHV 28 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~ 28 (523)
|+|-.|.+.|..|+++|++|+++.++..
T Consensus 35 as~gIG~aia~~l~~~G~~V~~~~r~~~ 62 (260)
T 3gem_A 35 ASQRVGLHCALRLLEHGHRVIISYRTEH 62 (260)
T ss_dssp TTSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEeCChH
Confidence 4677899999999999999999998753
No 425
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=50.04 E-value=9.4 Score=38.16 Aligned_cols=27 Identities=22% Similarity=0.294 Sum_probs=25.0
Q ss_pred CCChhHHHHHHHHHHc--CCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARA--GLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~--G~~V~vlE~~~ 27 (523)
|.|..|+..|..|+++ |++|++++++.
T Consensus 12 G~G~mG~~lA~~La~~g~G~~V~~~d~~~ 40 (467)
T 2q3e_A 12 GAGYVGGPTCSVIAHMCPEIRVTVVDVNE 40 (467)
T ss_dssp CCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred CCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 8999999999999999 89999999864
No 426
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=49.50 E-value=12 Score=35.05 Aligned_cols=27 Identities=26% Similarity=0.273 Sum_probs=25.1
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~ 27 (523)
|+|..|...|..|++.|++|++++++.
T Consensus 37 G~G~mG~~~a~~l~~~g~~V~~~~~~~ 63 (316)
T 2uyy_A 37 GLGLMGSGIVSNLLKMGHTVTVWNRTA 63 (316)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEECSSG
T ss_pred cccHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 899999999999999999999999864
No 427
>1j6u_A UDP-N-acetylmuramate-alanine ligase MURC; structural genomics, TM0231, JCSG, PSI, protein structure initiative; 2.30A {Thermotoga maritima} SCOP: c.5.1.1 c.59.1.1 c.72.2.1
Probab=49.36 E-value=7.6 Score=38.87 Aligned_cols=26 Identities=15% Similarity=-0.004 Sum_probs=23.0
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHV 28 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~ 28 (523)
|.|++|+ |..|.+.|++|++.|....
T Consensus 22 G~G~sgl--A~~l~~~G~~V~g~D~~~~ 47 (469)
T 1j6u_A 22 GIGMSAV--ALHEFSNGNDVYGSNIEET 47 (469)
T ss_dssp SHHHHHH--HHHHHHTTCEEEEECSSCC
T ss_pred ccCHHHH--HHHHHhCCCEEEEEcCCCC
Confidence 7899999 7889999999999998653
No 428
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=49.13 E-value=13 Score=33.40 Aligned_cols=28 Identities=21% Similarity=0.215 Sum_probs=24.4
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHV 28 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~ 28 (523)
|+|-.|.+.|..|+++|++|+++.++..
T Consensus 9 as~gIG~~~a~~l~~~G~~V~~~~r~~~ 36 (257)
T 1fjh_A 9 CATGIGAATRKVLEAAGHQIVGIDIRDA 36 (257)
T ss_dssp TTSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEeCCch
Confidence 5677899999999999999999988653
No 429
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=48.99 E-value=13 Score=33.33 Aligned_cols=28 Identities=11% Similarity=0.185 Sum_probs=24.8
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHV 28 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~ 28 (523)
|+|-.|.+.|..|+++|++|+++.++..
T Consensus 30 as~gIG~~la~~l~~~G~~V~~~~r~~~ 57 (251)
T 3orf_A 30 GSGALGAEVVKFFKSKSWNTISIDFREN 57 (251)
T ss_dssp TTSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 4677899999999999999999998764
No 430
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=48.95 E-value=12 Score=34.38 Aligned_cols=27 Identities=19% Similarity=0.174 Sum_probs=24.6
Q ss_pred CC-ChhHHHHHHHHHHcCCcEEEEccCC
Q psy893 1 EA-GHNGLVSAAYLARAGLSVAVLERRH 27 (523)
Q Consensus 1 Ga-G~~GL~aA~~La~~G~~V~vlE~~~ 27 (523)
|+ |..|.+.|..|+++|++|++++++.
T Consensus 18 G~tG~mG~~la~~l~~~g~~V~~~~r~~ 45 (286)
T 3c24_A 18 GAGGKMGARITRKIHDSAHHLAAIEIAP 45 (286)
T ss_dssp TTTSHHHHHHHHHHHHSSSEEEEECCSH
T ss_pred CCCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 77 9999999999999999999999754
No 431
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=48.80 E-value=13 Score=37.23 Aligned_cols=27 Identities=15% Similarity=0.126 Sum_probs=25.6
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~ 27 (523)
|.|..|.+.|..|+++|++|++++++.
T Consensus 11 GlG~MG~~lA~~L~~~G~~V~v~dr~~ 37 (484)
T 4gwg_A 11 GLAVMGQNLILNMNDHGFVVCAFNRTV 37 (484)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred ChhHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 889999999999999999999999875
No 432
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=48.27 E-value=4.7 Score=32.76 Aligned_cols=27 Identities=22% Similarity=0.191 Sum_probs=23.8
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~ 27 (523)
|+|..|...|..|++.|.+|+|++++.
T Consensus 28 G~G~iG~~~a~~l~~~g~~v~v~~r~~ 54 (144)
T 3oj0_A 28 GNGMLASEIAPYFSYPQYKVTVAGRNI 54 (144)
T ss_dssp CCSHHHHHHGGGCCTTTCEEEEEESCH
T ss_pred CCCHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 889999999999988999999998864
No 433
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=48.24 E-value=12 Score=33.85 Aligned_cols=27 Identities=19% Similarity=0.276 Sum_probs=24.8
Q ss_pred CCChhHHHHHHHHHHcC-CcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAG-LSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G-~~V~vlE~~~ 27 (523)
|+|..|.+.|..|+++| ++|++++++.
T Consensus 7 G~G~mG~~~a~~l~~~g~~~v~~~~r~~ 34 (263)
T 1yqg_A 7 GGGNMAAAVAGGLVKQGGYRIYIANRGA 34 (263)
T ss_dssp CCSHHHHHHHHHHHHHCSCEEEEECSSH
T ss_pred CchHHHHHHHHHHHHCCCCeEEEECCCH
Confidence 89999999999999999 9999999864
No 434
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=48.20 E-value=10 Score=36.62 Aligned_cols=28 Identities=11% Similarity=0.076 Sum_probs=25.9
Q ss_pred CCChhHHHHHHHHHHcC-------CcEEEEccCCC
Q psy893 1 EAGHNGLVSAAYLARAG-------LSVAVLERRHV 28 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G-------~~V~vlE~~~~ 28 (523)
|+|..|.+.|..|+++| ++|++++++..
T Consensus 28 GaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 28 GSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp CCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC
T ss_pred CcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChh
Confidence 89999999999999999 99999998765
No 435
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=47.97 E-value=14 Score=34.65 Aligned_cols=27 Identities=26% Similarity=0.299 Sum_probs=24.8
Q ss_pred CCChhHHHHHHHHHHc--CCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARA--GLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~--G~~V~vlE~~~ 27 (523)
|+|..|.+.|..|+++ |++|+++|++.
T Consensus 7 GaG~vG~~la~~la~~~~g~~V~l~D~~~ 35 (310)
T 1guz_A 7 GAGNVGATTAFRLAEKQLARELVLLDVVE 35 (310)
T ss_dssp CCSHHHHHHHHHHHHTTCCSEEEEECSSS
T ss_pred CCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 8999999999999985 79999999875
No 436
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=47.73 E-value=14 Score=33.04 Aligned_cols=27 Identities=22% Similarity=0.177 Sum_probs=23.9
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~ 27 (523)
|+|-.|.+.|..|+++|++|+++.++.
T Consensus 15 as~gIG~~ia~~l~~~G~~V~~~~r~~ 41 (249)
T 2ew8_A 15 GANGIGRAIAERFAVEGADIAIADLVP 41 (249)
T ss_dssp TTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCcHHHHHHHHHHHHCCCEEEEEcCCc
Confidence 567789999999999999999998865
No 437
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=47.37 E-value=14 Score=33.12 Aligned_cols=27 Identities=15% Similarity=0.068 Sum_probs=23.6
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~ 27 (523)
|+|-.|.+.|..|+++|++|+++.++.
T Consensus 10 as~gIG~~ia~~l~~~G~~V~~~~r~~ 36 (247)
T 3dii_A 10 GGHGIGKQICLDFLEAGDKVCFIDIDE 36 (247)
T ss_dssp TTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 567789999999999999999998754
No 438
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=47.28 E-value=13 Score=33.05 Aligned_cols=28 Identities=14% Similarity=0.036 Sum_probs=24.4
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHV 28 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~ 28 (523)
|+|-.|.+.|..|+++|++|+++.++..
T Consensus 15 as~gIG~~ia~~l~~~G~~V~~~~r~~~ 42 (241)
T 1dhr_A 15 GRGALGSRCVQAFRARNWWVASIDVVEN 42 (241)
T ss_dssp TTSHHHHHHHHHHHTTTCEEEEEESSCC
T ss_pred CCcHHHHHHHHHHHhCCCEEEEEeCChh
Confidence 4677899999999999999999998753
No 439
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=47.16 E-value=14 Score=33.76 Aligned_cols=27 Identities=26% Similarity=0.245 Sum_probs=24.8
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~ 27 (523)
|+|..|.+.|..|++.|++|++++++.
T Consensus 7 G~G~~G~~~a~~l~~~g~~V~~~~~~~ 33 (279)
T 2f1k_A 7 GLGLIGASLAGDLRRRGHYLIGVSRQQ 33 (279)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 899999999999999999999998764
No 440
>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A
Probab=47.12 E-value=15 Score=32.64 Aligned_cols=27 Identities=26% Similarity=0.238 Sum_probs=23.9
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~ 27 (523)
|+|-.|.+.|..|+++|++|+++.++.
T Consensus 10 as~giG~~~a~~l~~~G~~V~~~~r~~ 36 (239)
T 2ekp_A 10 GSRGIGRAIAEALVARGYRVAIASRNP 36 (239)
T ss_dssp TTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 567789999999999999999998865
No 441
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=46.99 E-value=15 Score=33.10 Aligned_cols=28 Identities=21% Similarity=0.233 Sum_probs=24.3
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHV 28 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~ 28 (523)
|+|-.|.+.|..|+++|++|+++.++..
T Consensus 15 as~gIG~aia~~l~~~G~~V~~~~r~~~ 42 (257)
T 3tpc_A 15 ASSGLGAAVTRMLAQEGATVLGLDLKPP 42 (257)
T ss_dssp TTSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEeCChH
Confidence 4567799999999999999999998764
No 442
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=46.84 E-value=8.5 Score=33.91 Aligned_cols=27 Identities=22% Similarity=0.206 Sum_probs=22.8
Q ss_pred CCChhHHHHHHHHHHcCCcEEE-EccCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAV-LERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~v-lE~~~ 27 (523)
|+|..|.+.|..|+++|++|++ ++++.
T Consensus 30 G~G~mG~~la~~l~~~g~~V~~v~~r~~ 57 (220)
T 4huj_A 30 GAGAIGSALAERFTAAQIPAIIANSRGP 57 (220)
T ss_dssp ECHHHHHHHHHHHHHTTCCEEEECTTCG
T ss_pred CCCHHHHHHHHHHHhCCCEEEEEECCCH
Confidence 7888899999999999999988 77654
No 443
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=46.76 E-value=15 Score=32.35 Aligned_cols=27 Identities=15% Similarity=0.096 Sum_probs=23.7
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~ 27 (523)
|+|--|.+.|..|+++|++|+++.++.
T Consensus 9 as~gIG~~~a~~l~~~G~~V~~~~r~~ 35 (230)
T 3guy_A 9 ASSGLGAELAKLYDAEGKATYLTGRSE 35 (230)
T ss_dssp TTSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCchHHHHHHHHHHHCCCEEEEEeCCH
Confidence 567779999999999999999998864
No 444
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=46.76 E-value=14 Score=33.52 Aligned_cols=28 Identities=32% Similarity=0.421 Sum_probs=24.3
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHV 28 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~ 28 (523)
|+|-.|.+.|..|+++|++|+++.++..
T Consensus 19 as~gIG~aia~~l~~~G~~V~~~~r~~~ 46 (271)
T 3tzq_B 19 ACGGIGLETSRVLARAGARVVLADLPET 46 (271)
T ss_dssp TTSHHHHHHHHHHHHTTCEEEEEECTTS
T ss_pred CCcHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 4677789999999999999999998753
No 445
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2
Probab=46.73 E-value=14 Score=33.03 Aligned_cols=27 Identities=22% Similarity=0.293 Sum_probs=23.9
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~ 27 (523)
|+|-.|.+.|..|+++|++|+++.++.
T Consensus 27 as~gIG~~~a~~l~~~G~~V~~~~r~~ 53 (249)
T 1o5i_A 27 ASRGIGRAVADVLSQEGAEVTICARNE 53 (249)
T ss_dssp CSSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 567889999999999999999998864
No 446
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=46.68 E-value=15 Score=34.64 Aligned_cols=27 Identities=22% Similarity=0.311 Sum_probs=25.2
Q ss_pred CCChhHHHHHHHHHHcCC-cEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGL-SVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~-~V~vlE~~~ 27 (523)
|+|..|.+.|..|+..|+ +|+++|.+.
T Consensus 11 GaG~vG~~ia~~la~~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 11 GSGMIGGVMATLIVQKNLGDVVLFDIVK 38 (322)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCCHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence 899999999999999998 999999864
No 447
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=46.65 E-value=15 Score=32.76 Aligned_cols=28 Identities=32% Similarity=0.374 Sum_probs=24.7
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHV 28 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~ 28 (523)
|+|..|...|..|+++|++|+++.++..
T Consensus 9 asg~iG~~l~~~L~~~g~~V~~~~r~~~ 36 (255)
T 2dkn_A 9 SASGIGAALKELLARAGHTVIGIDRGQA 36 (255)
T ss_dssp TTSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCcHHHHHHHHHHHhCCCEEEEEeCChh
Confidence 4688999999999999999999998653
No 448
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=46.61 E-value=16 Score=33.39 Aligned_cols=28 Identities=36% Similarity=0.433 Sum_probs=25.3
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHV 28 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~ 28 (523)
|+|-+|-++|+.|++.|.+|+|+.|...
T Consensus 125 GaGGaaraia~~L~~~G~~v~V~nRt~~ 152 (269)
T 3phh_A 125 GAGGSAKALACELKKQGLQVSVLNRSSR 152 (269)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 8899999999999999999999988753
No 449
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=46.58 E-value=13 Score=32.81 Aligned_cols=27 Identities=11% Similarity=0.121 Sum_probs=25.0
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~ 27 (523)
|||-.|...|..|.++|.+|+|++...
T Consensus 38 GgG~va~~ka~~Ll~~GA~VtVvap~~ 64 (223)
T 3dfz_A 38 GGGTIATRRIKGFLQEGAAITVVAPTV 64 (223)
T ss_dssp CCSHHHHHHHHHHGGGCCCEEEECSSC
T ss_pred CCCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 899999999999999999999998753
No 450
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=46.55 E-value=13 Score=32.95 Aligned_cols=28 Identities=14% Similarity=0.246 Sum_probs=24.6
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHV 28 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~ 28 (523)
|+|-.|.+.|..|+++|++|+++.++..
T Consensus 11 as~gIG~~~a~~l~~~G~~V~~~~r~~~ 38 (236)
T 1ooe_A 11 GKGALGSAILEFFKKNGYTVLNIDLSAN 38 (236)
T ss_dssp TTSHHHHHHHHHHHHTTEEEEEEESSCC
T ss_pred CCcHHHHHHHHHHHHCCCEEEEEecCcc
Confidence 4677899999999999999999998754
No 451
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=46.37 E-value=15 Score=32.66 Aligned_cols=27 Identities=22% Similarity=0.234 Sum_probs=23.5
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~ 27 (523)
|+|-.|.+.|..|+++|++|+++.++.
T Consensus 11 as~GIG~a~a~~l~~~G~~V~~~~r~~ 37 (235)
T 3l6e_A 11 AGSGLGRALTIGLVERGHQVSMMGRRY 37 (235)
T ss_dssp TTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 467789999999999999999998764
No 452
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=46.37 E-value=10 Score=34.69 Aligned_cols=27 Identities=19% Similarity=0.096 Sum_probs=24.5
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~ 27 (523)
|+|-.|.++|..|++.|.+|+|+.|+.
T Consensus 126 GaGg~g~a~a~~L~~~G~~v~v~~R~~ 152 (272)
T 1p77_A 126 GAGGATKGVLLPLLQAQQNIVLANRTF 152 (272)
T ss_dssp CCSHHHHTTHHHHHHTTCEEEEEESSH
T ss_pred CCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 788899999999999999999998864
No 453
>2o8n_A APOA-I binding protein; rossmann fold, protein binding; 2.00A {Mus musculus} PDB: 2dg2_A
Probab=46.27 E-value=12 Score=34.16 Aligned_cols=19 Identities=32% Similarity=0.331 Sum_probs=17.4
Q ss_pred HHHHHHHHHHcCCcEEEEc
Q psy893 6 GLVSAAYLARAGLSVAVLE 24 (523)
Q Consensus 6 GL~aA~~La~~G~~V~vlE 24 (523)
||.+|.+|+++|++|.|+=
T Consensus 95 Glv~AR~L~~~G~~V~V~~ 113 (265)
T 2o8n_A 95 GLVCARHLKLFGYQPTIYY 113 (265)
T ss_dssp HHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHCCCcEEEEE
Confidence 5999999999999999973
No 454
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=46.23 E-value=14 Score=34.08 Aligned_cols=27 Identities=30% Similarity=0.339 Sum_probs=24.8
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~ 27 (523)
|+|..|...|..|++.|++|++++++.
T Consensus 12 G~G~~G~~~a~~l~~~g~~V~~~~~~~ 38 (299)
T 1vpd_A 12 GLGIMGKPMSKNLLKAGYSLVVSDRNP 38 (299)
T ss_dssp CCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 889999999999999999999998764
No 455
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=46.21 E-value=16 Score=32.94 Aligned_cols=27 Identities=22% Similarity=0.153 Sum_probs=23.7
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~ 27 (523)
|+|-.|.+.|..|+++|++|+++.++.
T Consensus 12 as~gIG~~ia~~l~~~G~~V~~~~r~~ 38 (260)
T 1x1t_A 12 STSGIGLGIATALAAQGADIVLNGFGD 38 (260)
T ss_dssp CSSHHHHHHHHHHHHTTCEEEEECCSC
T ss_pred CCcHHHHHHHHHHHHcCCEEEEEeCCc
Confidence 467789999999999999999998764
No 456
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Probab=46.19 E-value=15 Score=32.80 Aligned_cols=27 Identities=37% Similarity=0.311 Sum_probs=23.9
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~ 27 (523)
|+|-.|.+.|..|+++|++|+++.++.
T Consensus 23 as~gIG~~ia~~l~~~G~~V~~~~r~~ 49 (247)
T 1uzm_A 23 GNRGIGLAIAQRLAADGHKVAVTHRGS 49 (247)
T ss_dssp TTSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 467789999999999999999998865
No 457
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=46.06 E-value=17 Score=32.91 Aligned_cols=28 Identities=11% Similarity=-0.057 Sum_probs=24.6
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHV 28 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~ 28 (523)
|+|-.|.+.|..|+++|++|+++.++..
T Consensus 36 as~gIG~aia~~l~~~G~~V~~~~r~~~ 63 (260)
T 3un1_A 36 ASQGIGAGLVRAYRDRNYRVVATSRSIK 63 (260)
T ss_dssp CSSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEeCChh
Confidence 5677899999999999999999998754
No 458
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=45.98 E-value=14 Score=34.66 Aligned_cols=26 Identities=31% Similarity=0.428 Sum_probs=24.8
Q ss_pred CCChhHHHHHHHHHHcCC-cEEEEccC
Q psy893 1 EAGHNGLVSAAYLARAGL-SVAVLERR 26 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~-~V~vlE~~ 26 (523)
|+|..|.+.|..|+++|+ +|+++|.+
T Consensus 15 GaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 15 GAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred CCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 899999999999999999 99999987
No 459
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=45.73 E-value=16 Score=32.91 Aligned_cols=28 Identities=32% Similarity=0.237 Sum_probs=24.3
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHV 28 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~ 28 (523)
|+|-.|.+.|..|+++|++|+++.++..
T Consensus 14 as~gIG~~ia~~l~~~G~~V~~~~r~~~ 41 (256)
T 2d1y_A 14 GARGIGRAIAQAFAREGALVALCDLRPE 41 (256)
T ss_dssp TTSHHHHHHHHHHHHTTCEEEEEESSTT
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEeCChh
Confidence 4677899999999999999999988653
No 460
>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=45.66 E-value=14 Score=32.63 Aligned_cols=28 Identities=32% Similarity=0.309 Sum_probs=24.9
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHV 28 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~ 28 (523)
|+|-.|...|..|+++|++|+++.++..
T Consensus 10 asggiG~~la~~l~~~G~~V~~~~r~~~ 37 (242)
T 1uay_A 10 GASGLGRAAALALKARGYRVVVLDLRRE 37 (242)
T ss_dssp TTSHHHHHHHHHHHHHTCEEEEEESSCC
T ss_pred CCChHHHHHHHHHHHCCCEEEEEccCcc
Confidence 5678899999999999999999998765
No 461
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=45.64 E-value=15 Score=33.04 Aligned_cols=27 Identities=33% Similarity=0.396 Sum_probs=23.6
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~ 27 (523)
|+|-.|.+.|..|+++|++|+++.++.
T Consensus 22 as~gIG~~ia~~l~~~G~~V~~~~r~~ 48 (260)
T 2zat_A 22 STDGIGLAIARRLAQDGAHVVVSSRKQ 48 (260)
T ss_dssp CSSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 567789999999999999999998753
No 462
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=45.64 E-value=15 Score=32.97 Aligned_cols=27 Identities=30% Similarity=0.345 Sum_probs=23.8
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~ 27 (523)
|+|--|...|..|+++|++|+++.++.
T Consensus 21 asggiG~~la~~l~~~G~~V~~~~r~~ 47 (260)
T 3awd_A 21 GAQNIGLACVTALAEAGARVIIADLDE 47 (260)
T ss_dssp TTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCchHHHHHHHHHHHCCCEEEEEeCCH
Confidence 567889999999999999999998753
No 463
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=45.63 E-value=15 Score=32.32 Aligned_cols=27 Identities=22% Similarity=0.310 Sum_probs=23.7
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~ 27 (523)
|+|--|...|..|+++|++|+++.++.
T Consensus 13 asggiG~~~a~~l~~~G~~V~~~~r~~ 39 (234)
T 2ehd_A 13 ASRGIGEATARLLHAKGYRVGLMARDE 39 (234)
T ss_dssp TTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 577889999999999999999998753
No 464
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=45.63 E-value=15 Score=33.06 Aligned_cols=27 Identities=26% Similarity=0.206 Sum_probs=23.6
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~ 27 (523)
|+|-.|.+.|..|+++|++|+++.++.
T Consensus 16 as~gIG~~ia~~l~~~G~~V~~~~r~~ 42 (259)
T 4e6p_A 16 SARGIGRAFAEAYVREGATVAIADIDI 42 (259)
T ss_dssp CSSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 567789999999999999999998753
No 465
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=45.61 E-value=14 Score=32.54 Aligned_cols=27 Identities=15% Similarity=0.127 Sum_probs=24.2
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~ 27 (523)
|+|..|...|..|+++|++|+++.|+.
T Consensus 29 atG~iG~~l~~~L~~~G~~V~~~~R~~ 55 (236)
T 3e8x_A 29 ANGKVARYLLSELKNKGHEPVAMVRNE 55 (236)
T ss_dssp TTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred CCChHHHHHHHHHHhCCCeEEEEECCh
Confidence 458999999999999999999999864
No 466
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=45.61 E-value=7.9 Score=35.52 Aligned_cols=27 Identities=19% Similarity=0.257 Sum_probs=25.2
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~ 27 (523)
|+|-.|+..|..|.+.|.+|+|++...
T Consensus 20 GgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 20 GGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp EESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 899999999999999999999999764
No 467
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=45.52 E-value=11 Score=35.24 Aligned_cols=25 Identities=36% Similarity=0.357 Sum_probs=23.6
Q ss_pred CCChhHHHHHHHHHHc-----C-CcEEEEcc
Q psy893 1 EAGHNGLVSAAYLARA-----G-LSVAVLER 25 (523)
Q Consensus 1 GaG~~GL~aA~~La~~-----G-~~V~vlE~ 25 (523)
|+|..|.+.|..|+++ | ++|+++++
T Consensus 15 G~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 15 GLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp CCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 8999999999999999 9 99999986
No 468
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=45.42 E-value=15 Score=33.05 Aligned_cols=27 Identities=22% Similarity=0.249 Sum_probs=23.4
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~ 27 (523)
|+|-.|.+.|..|+++|++|+++.++.
T Consensus 14 as~gIG~aia~~l~~~G~~V~~~~r~~ 40 (257)
T 3imf_A 14 GSSGMGKGMATRFAKEGARVVITGRTK 40 (257)
T ss_dssp TTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 467779999999999999999998764
No 469
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=45.23 E-value=15 Score=32.89 Aligned_cols=27 Identities=30% Similarity=0.313 Sum_probs=23.4
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~ 27 (523)
|+|-.|.+.|..|+++|++|+++.++.
T Consensus 20 as~gIG~aia~~l~~~G~~V~~~~r~~ 46 (252)
T 3f1l_A 20 ASDGIGREAAMTYARYGATVILLGRNE 46 (252)
T ss_dssp TTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCChHHHHHHHHHHHCCCEEEEEeCCH
Confidence 456778999999999999999998764
No 470
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=45.21 E-value=16 Score=32.72 Aligned_cols=27 Identities=33% Similarity=0.238 Sum_probs=23.4
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~ 27 (523)
|+|-.|.+.|..|+++|++|+++.++.
T Consensus 14 as~gIG~a~a~~l~~~G~~V~~~~r~~ 40 (247)
T 3rwb_A 14 AAQGIGKAIAARLAADGATVIVSDINA 40 (247)
T ss_dssp TTSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 457779999999999999999998754
No 471
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=45.18 E-value=15 Score=36.66 Aligned_cols=27 Identities=37% Similarity=0.284 Sum_probs=24.9
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~ 27 (523)
|+|-.|.++|..|+..|.+|++.|+++
T Consensus 272 GaGgIG~aiA~~Laa~GA~Viv~D~~~ 298 (488)
T 3ond_A 272 GYGDVGKGCAAALKQAGARVIVTEIDP 298 (488)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 789999999999999999999999864
No 472
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=45.18 E-value=17 Score=32.63 Aligned_cols=28 Identities=29% Similarity=0.228 Sum_probs=24.2
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHV 28 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~ 28 (523)
|+|-.|...|..|+++|++|+++.++..
T Consensus 12 as~giG~~ia~~l~~~G~~V~~~~r~~~ 39 (255)
T 2q2v_A 12 STSGIGLGIAQVLARAGANIVLNGFGDP 39 (255)
T ss_dssp CSSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred CCcHHHHHHHHHHHHCCCEEEEEeCCch
Confidence 4677899999999999999999987653
No 473
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=45.17 E-value=16 Score=36.68 Aligned_cols=27 Identities=15% Similarity=0.126 Sum_probs=25.2
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~ 27 (523)
|+|..|...|..|+++|++|++++++.
T Consensus 9 G~G~mG~~lA~~La~~G~~V~v~dr~~ 35 (482)
T 2pgd_A 9 GLAVMGQNLILNMNDHGFVVCAFNRTV 35 (482)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred ChHHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 899999999999999999999999864
No 474
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=45.14 E-value=24 Score=36.61 Aligned_cols=31 Identities=29% Similarity=0.432 Sum_probs=28.1
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC-CCCc
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH-VLGG 31 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~-~~GG 31 (523)
|||++|++||+.|++.|.+|+|+|++. .+|+
T Consensus 34 GgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~ 65 (637)
T 2zxi_A 34 GGGHAGIEAALAAARMGAKTAMFVLNADTIGQ 65 (637)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEEESCGGGTTC
T ss_pred CCCHHHHHHHHHHHHCCCCEEEEEecccccCC
Confidence 899999999999999999999999984 5554
No 475
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=45.13 E-value=16 Score=31.57 Aligned_cols=27 Identities=19% Similarity=0.206 Sum_probs=24.1
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~ 27 (523)
|+|..|...+..|+++|++|+++.|+.
T Consensus 8 atG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 8 ATGRAGSRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp TTSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred CCchhHHHHHHHHHhCCCEEEEEEcCc
Confidence 368999999999999999999998864
No 476
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=45.12 E-value=16 Score=32.46 Aligned_cols=27 Identities=19% Similarity=0.198 Sum_probs=23.9
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~ 27 (523)
|+|.-|...|..|+++|++|+++.++.
T Consensus 15 asggiG~~~a~~l~~~G~~V~~~~r~~ 41 (244)
T 1cyd_A 15 AGKGIGRDTVKALHASGAKVVAVTRTN 41 (244)
T ss_dssp TTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCchHHHHHHHHHHHCCCEEEEEeCCH
Confidence 568889999999999999999998754
No 477
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=45.11 E-value=16 Score=33.16 Aligned_cols=26 Identities=23% Similarity=0.307 Sum_probs=23.1
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERR 26 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~ 26 (523)
|+|-.|.+.|..|+++|++|+++.++
T Consensus 24 as~gIG~aia~~l~~~G~~V~~~~r~ 49 (266)
T 3p19_A 24 ASSGIGEAIARRFSEEGHPLLLLARR 49 (266)
T ss_dssp TTSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 46777999999999999999999875
No 478
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=45.10 E-value=15 Score=33.01 Aligned_cols=27 Identities=22% Similarity=0.149 Sum_probs=23.6
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~ 27 (523)
|+|-.|.+.|..|+++|++|+++.++.
T Consensus 15 as~GIG~aia~~l~~~G~~V~~~~r~~ 41 (252)
T 3h7a_A 15 AGDYIGAEIAKKFAAEGFTVFAGRRNG 41 (252)
T ss_dssp CSSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred CCchHHHHHHHHHHHCCCEEEEEeCCH
Confidence 456779999999999999999998864
No 479
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=45.08 E-value=14 Score=34.76 Aligned_cols=27 Identities=19% Similarity=0.282 Sum_probs=25.1
Q ss_pred CCChhHHHHHHHHHHcCC--cEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGL--SVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~--~V~vlE~~~ 27 (523)
|+|..|.+.|..|+++|+ +|++++++.
T Consensus 7 GaG~~G~~la~~l~~~g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 7 GLGRVGSSTAFALLMKGFAREMVLIDVDK 35 (319)
T ss_dssp CCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 899999999999999999 999999864
No 480
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=44.83 E-value=17 Score=33.25 Aligned_cols=28 Identities=25% Similarity=0.112 Sum_probs=24.3
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHV 28 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~ 28 (523)
|+|-.|.+.|..|+++|++|+++.++..
T Consensus 41 as~GIG~aia~~la~~G~~V~~~~r~~~ 68 (275)
T 4imr_A 41 SSRGIGAAIAEGLAGAGAHVILHGVKPG 68 (275)
T ss_dssp CSSHHHHHHHHHHHHTTCEEEEEESSTT
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 4677799999999999999999998654
No 481
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=44.81 E-value=16 Score=33.03 Aligned_cols=27 Identities=37% Similarity=0.309 Sum_probs=23.5
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~ 27 (523)
|+|-.|.+.|..|+++|++|+++.++.
T Consensus 18 as~gIG~aia~~l~~~G~~V~~~~r~~ 44 (262)
T 3pk0_A 18 GTKGIGRGIATVFARAGANVAVAGRST 44 (262)
T ss_dssp CSSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 567779999999999999999998754
No 482
>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=44.51 E-value=16 Score=32.57 Aligned_cols=27 Identities=26% Similarity=0.241 Sum_probs=23.5
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~ 27 (523)
|+|-.|...|..|+++|++|+++.++.
T Consensus 14 as~gIG~~ia~~l~~~G~~V~~~~r~~ 40 (246)
T 2ag5_A 14 AAQGIGQAAALAFAREGAKVIATDINE 40 (246)
T ss_dssp TTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 467789999999999999999998753
No 483
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=44.46 E-value=7.8 Score=37.77 Aligned_cols=32 Identities=22% Similarity=0.117 Sum_probs=19.8
Q ss_pred CCCC-CCCCeEecCCCCCCCCCCC-Cc-cHHHHHHH
Q psy893 484 SPFT-LIPHLLLCGSGAHPGGGVC-GA-PGYIAAQM 516 (523)
Q Consensus 484 ~~~t-~i~~LylaG~~~~pg~g~~-~a-sG~~aA~~ 516 (523)
..++ .++|||+||+-+.. .|.. .+ +|..|+..
T Consensus 322 tle~k~~~~Lf~AGqi~G~-~Gy~eAaa~Gl~AG~n 356 (443)
T 3g5s_A 322 TLEFREAEGLYAAGVLAGV-EGYLESAATGFLAGLN 356 (443)
T ss_dssp TSEETTEEEEEECGGGGTB-CSHHHHHHHHHHHHHH
T ss_pred hceecCCCCEEECcccccc-HHHHHHHHhHHHHHHH
Confidence 4455 59999999999744 3333 22 55555433
No 484
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=44.44 E-value=16 Score=32.57 Aligned_cols=27 Identities=33% Similarity=0.368 Sum_probs=23.5
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~ 27 (523)
|+|-.|.+.|..|+++|++|+++.++.
T Consensus 15 as~gIG~aia~~l~~~G~~V~~~~r~~ 41 (247)
T 2jah_A 15 ASSGIGEATARALAAEGAAVAIAARRV 41 (247)
T ss_dssp CSSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 567789999999999999999998753
No 485
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=44.35 E-value=17 Score=32.57 Aligned_cols=27 Identities=22% Similarity=0.135 Sum_probs=23.3
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~ 27 (523)
|+|-.|.+.|..|+++|++|+++.++.
T Consensus 17 as~gIG~a~a~~l~~~G~~V~~~~r~~ 43 (248)
T 3op4_A 17 ASRGIGKAIAELLAERGAKVIGTATSE 43 (248)
T ss_dssp CSSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 466779999999999999999998754
No 486
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Probab=44.33 E-value=16 Score=32.73 Aligned_cols=27 Identities=19% Similarity=0.191 Sum_probs=23.5
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~ 27 (523)
|+|-.|.+.|..|+++|++|+++.++.
T Consensus 8 as~gIG~aia~~l~~~G~~V~~~~r~~ 34 (248)
T 3asu_A 8 ATAGFGECITRRFIQQGHKVIATGRRQ 34 (248)
T ss_dssp TTSTTHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCChHHHHHHHHHHHCCCEEEEEeCCH
Confidence 467779999999999999999998764
No 487
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=44.29 E-value=16 Score=33.94 Aligned_cols=27 Identities=30% Similarity=0.386 Sum_probs=24.6
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~ 27 (523)
|=|..|..-|..|.++||+|+|++++.
T Consensus 10 GlG~MG~~mA~~L~~~G~~v~v~dr~~ 36 (300)
T 3obb_A 10 GLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (300)
T ss_dssp CCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred eehHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 668999999999999999999999864
No 488
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=44.27 E-value=17 Score=33.05 Aligned_cols=28 Identities=21% Similarity=0.200 Sum_probs=23.9
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHV 28 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~ 28 (523)
|+|-.|.+.|..|+++|++|+++.++..
T Consensus 22 as~GIG~aia~~l~~~G~~V~~~~r~~~ 49 (269)
T 3vtz_A 22 GSSGIGLAVVDALVRYGAKVVSVSLDEK 49 (269)
T ss_dssp TTSHHHHHHHHHHHHTTCEEEEEESCC-
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEeCCch
Confidence 4677799999999999999999998754
No 489
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=44.26 E-value=16 Score=32.88 Aligned_cols=27 Identities=22% Similarity=0.348 Sum_probs=23.6
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~ 27 (523)
|+|-.|...|..|+++|++|+++.++.
T Consensus 15 as~gIG~~ia~~l~~~G~~V~~~~r~~ 41 (263)
T 3ai3_A 15 SSSGIGLAIAEGFAKEGAHIVLVARQV 41 (263)
T ss_dssp CSSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCchHHHHHHHHHHHCCCEEEEEcCCH
Confidence 567789999999999999999998754
No 490
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=44.24 E-value=16 Score=32.93 Aligned_cols=27 Identities=26% Similarity=0.247 Sum_probs=23.6
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~ 27 (523)
|+|-.|...|..|+++|++|+++.++.
T Consensus 20 as~gIG~~ia~~l~~~G~~V~~~~r~~ 46 (263)
T 3ak4_A 20 GSKGIGAAIARALDKAGATVAIADLDV 46 (263)
T ss_dssp TTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCChHHHHHHHHHHHCCCEEEEEeCCH
Confidence 567789999999999999999998754
No 491
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=44.22 E-value=16 Score=33.42 Aligned_cols=27 Identities=26% Similarity=0.213 Sum_probs=23.3
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~ 27 (523)
|+|-.|.+.|..|+++|++|+++.++.
T Consensus 37 as~gIG~aia~~la~~G~~V~~~~r~~ 63 (277)
T 3gvc_A 37 AGAGIGLAVARRLADEGCHVLCADIDG 63 (277)
T ss_dssp TTSTHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 466778999999999999999998753
No 492
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=43.97 E-value=15 Score=33.60 Aligned_cols=26 Identities=31% Similarity=0.322 Sum_probs=23.9
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~ 27 (523)
|+|..|...|..|++ |++|++++++.
T Consensus 8 G~G~~G~~~a~~l~~-g~~V~~~~~~~ 33 (289)
T 2cvz_A 8 GLGAMGYPMAGHLAR-RFPTLVWNRTF 33 (289)
T ss_dssp CCSTTHHHHHHHHHT-TSCEEEECSST
T ss_pred cccHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 899999999999999 99999999864
No 493
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=43.97 E-value=16 Score=36.53 Aligned_cols=27 Identities=33% Similarity=0.367 Sum_probs=25.1
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~ 27 (523)
|+|..|...|..|+++|++|++++++.
T Consensus 8 G~G~mG~~lA~~La~~G~~V~v~dr~~ 34 (478)
T 1pgj_A 8 GLGVMGANLALNIAEKGFKVAVFNRTY 34 (478)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred ChHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 899999999999999999999999863
No 494
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=43.83 E-value=19 Score=33.03 Aligned_cols=28 Identities=21% Similarity=0.304 Sum_probs=24.9
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHV 28 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~ 28 (523)
|+|..|-..+.+|.++|++|+++-|++.
T Consensus 8 atGfIG~~L~~~L~~~G~~V~~l~R~~~ 35 (298)
T 4b4o_A 8 GTGFIGTALTQLLNARGHEVTLVSRKPG 35 (298)
T ss_dssp TTSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 4699999999999999999999987654
No 495
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=43.80 E-value=18 Score=32.39 Aligned_cols=28 Identities=21% Similarity=0.121 Sum_probs=23.5
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHV 28 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~ 28 (523)
|++=.|.++|..|+++|.+|++.+++..
T Consensus 19 as~GIG~aia~~la~~Ga~Vv~~~~~~~ 46 (242)
T 4b79_A 19 GSSGIGAAIAMQFAELGAEVVALGLDAD 46 (242)
T ss_dssp TTSHHHHHHHHHHHHTTCEEEEEESSTT
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 3445689999999999999999998753
No 496
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=43.80 E-value=10 Score=36.14 Aligned_cols=28 Identities=14% Similarity=0.066 Sum_probs=25.9
Q ss_pred CCChhHHHHHHHHHHcC-------CcEEEEccCCC
Q psy893 1 EAGHNGLVSAAYLARAG-------LSVAVLERRHV 28 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G-------~~V~vlE~~~~ 28 (523)
|+|..|.+.|..|+++| ++|++++++..
T Consensus 15 G~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 15 GSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp CCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCB
T ss_pred CCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChh
Confidence 89999999999999999 99999998764
No 497
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=43.79 E-value=17 Score=33.07 Aligned_cols=27 Identities=11% Similarity=0.143 Sum_probs=23.6
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~ 27 (523)
|+|-.|.+.|..|+++|++|+++.++.
T Consensus 17 as~gIG~~ia~~l~~~G~~V~~~~r~~ 43 (270)
T 1yde_A 17 GGRGIGAGIVRAFVNSGARVVICDKDE 43 (270)
T ss_dssp CSSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 567789999999999999999998754
No 498
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=43.77 E-value=16 Score=35.28 Aligned_cols=27 Identities=30% Similarity=0.343 Sum_probs=24.9
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~ 27 (523)
|+|..|+.+|..|...|.+|++++++.
T Consensus 175 G~G~iG~~~a~~a~~~Ga~V~~~d~~~ 201 (377)
T 2vhw_A 175 GAGTAGYNAARIANGMGATVTVLDINI 201 (377)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 889999999999999999999999764
No 499
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=43.77 E-value=17 Score=32.49 Aligned_cols=27 Identities=19% Similarity=0.298 Sum_probs=23.6
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRH 27 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~ 27 (523)
|+|--|...|..|+++|++|+++.++.
T Consensus 19 asggiG~~la~~l~~~G~~V~~~~r~~ 45 (254)
T 2wsb_A 19 AGSGIGLEICRAFAASGARLILIDREA 45 (254)
T ss_dssp TTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 567889999999999999999998753
No 500
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=43.72 E-value=18 Score=32.41 Aligned_cols=28 Identities=18% Similarity=0.228 Sum_probs=24.3
Q ss_pred CCChhHHHHHHHHHHcCCcEEEEccCCC
Q psy893 1 EAGHNGLVSAAYLARAGLSVAVLERRHV 28 (523)
Q Consensus 1 GaG~~GL~aA~~La~~G~~V~vlE~~~~ 28 (523)
|+|-.|.+.|..|+++|++|+++.++..
T Consensus 15 as~giG~~ia~~l~~~G~~V~~~~r~~~ 42 (250)
T 2fwm_X 15 AGKGIGYATALAFVEAGAKVTGFDQAFT 42 (250)
T ss_dssp TTSHHHHHHHHHHHHTTCEEEEEESCCC
T ss_pred CCcHHHHHHHHHHHHCCCEEEEEeCchh
Confidence 4677799999999999999999988754
Done!