Your job contains 1 sequence.
>psy893
EAGHNGLVSAAYLARAGLSVAVLERRHVLGGAAVTEEIIPGFQFSRASYLLSLLRPHIYK
DLELKKHGLKLLTRDPRSYTPLSPDKWTNKAKSLTLGLDPQKNYEQIARFSVKDAQNFEK
YDHHIEEITNLLDPLFDIAPHDFGNLLMYNLFTRRGEMKDVYSLLTCSAFSILNDWFESE
PLKATLLTDGLIGAMVSPHSPSTSYVLLHHVMGGAEGVKGAWAYPEGGMGAVSQALARSA
QASGAQLFTSQTVTEITLDSDKRASGVVTNGLEIKAKYVLSNTTAKCTLLDLIPKGNLDE
RTTQAVQSIDYASPVTKINVALKSIPNFLADPNPSENTVQPHHHGSIHLNCEDMQQVFDA
YQDATQGIPSTRPMIEMVLPSSLDNTLSPPGHHVCLLFTQFTPYKLAGDRDWTEEDKANY
ATNVFSSIEQYCPGFTQDIVGYEILTPPDLEKEFGLTGGNIFHGALSLNQLLFNRPLPIQ
GPSSPFTLIPHLLLCGSGAHPGGGVCGAPGYIAAQMVNRLMRK
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy893
(523 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q3MHH6 - symbol:PYROXD2 "Pyridine nucleotide-di... 996 7.8e-144 2
ZFIN|ZDB-GENE-050506-147 - symbol:pyroxd2 "pyridine nucle... 988 2.1e-141 2
MGI|MGI:1921830 - symbol:Pyroxd2 "pyridine nucleotide-dis... 958 1.9e-138 2
WB|WBGene00018146 - symbol:F37C4.6 species:6239 "Caenorha... 1305 3.8e-133 1
TAIR|locus:505006683 - symbol:AT5G49555 species:3702 "Ara... 1141 9.1e-116 1
UNIPROTKB|Q8N2H3 - symbol:PYROXD2 "Pyridine nucleotide-di... 1005 2.3e-101 1
RGD|1303232 - symbol:Pyroxd2 "pyridine nucleotide-disulph... 979 1.3e-98 1
UNIPROTKB|O07794 - symbol:Rv3829c "PROBABLE DEHYDROGENASE... 275 6.8e-28 2
UNIPROTKB|P21685 - symbol:crtI "Phytoene desaturase (lyco... 129 7.5e-13 2
UNIPROTKB|Q8X0Z0 - symbol:carB "Phytoene dehydrogenase" s... 196 2.9e-12 1
UNIPROTKB|A8J9E9 - symbol:CHLREDRAFT_196597 "Carotenoid i... 108 2.5e-09 3
TAIR|locus:2009395 - symbol:AT1G57770 species:3702 "Arabi... 101 3.0e-09 3
ZFIN|ZDB-GENE-061110-141 - symbol:zgc:154169 "zgc:154169"... 165 8.3e-09 1
UNIPROTKB|Q10AT7 - symbol:Os03g0841900 "Os03g0841900 prot... 105 1.3e-08 3
UNIPROTKB|Q0IS25 - symbol:Os11g0572700 "Os11g0572700 prot... 106 3.2e-08 3
UNIPROTKB|A8J3K3 - symbol:CHLREDRAFT_130438 "Predicted pr... 101 4.3e-08 3
UNIPROTKB|P54979 - symbol:carA2 "zeta-carotene-forming ph... 101 1.3e-07 3
MGI|MGI:1914692 - symbol:Retsat "retinol saturase (all tr... 145 1.3e-06 1
UNIPROTKB|Q6NUM9 - symbol:RETSAT "All-trans-retinol 13,14... 145 1.3e-06 1
ZFIN|ZDB-GENE-050320-11 - symbol:retsat "retinol saturase... 144 1.6e-06 1
TAIR|locus:2033055 - symbol:CRTISO "carotenoid isomerase"... 100 3.4e-06 3
UNIPROTKB|P17054 - symbol:crtI "Phytoene desaturase (neur... 97 7.1e-06 2
UNIPROTKB|Q67GI0 - symbol:carB "Phytoene dehydrogenase" s... 137 9.0e-06 1
UNIPROTKB|Q64FG0 - symbol:RETSAT "All-trans-retinol 13,14... 111 1.4e-05 2
RGD|628802 - symbol:Retsat "retinol saturase (all trans r... 132 3.4e-05 1
>UNIPROTKB|Q3MHH6 [details] [associations]
symbol:PYROXD2 "Pyridine nucleotide-disulfide
oxidoreductase domain-containing protein 2" species:9913 "Bos
taurus" [GO:0016491 "oxidoreductase activity" evidence=IEA]
GO:GO:0016491 eggNOG:COG1233 EMBL:BC105235 IPI:IPI00716581
RefSeq:NP_001029704.1 UniGene:Bt.53596 ProteinModelPortal:Q3MHH6
STRING:Q3MHH6 PRIDE:Q3MHH6 GeneID:519120 KEGG:bta:519120 CTD:84795
HOGENOM:HOG000238954 InParanoid:Q3MHH6 OrthoDB:EOG4WM4TG
NextBio:20872812 Uniprot:Q3MHH6
Length = 581
Score = 996 (355.7 bits), Expect = 7.8e-144, Sum P(2) = 7.8e-144
Identities = 196/367 (53%), Positives = 249/367 (67%)
Query: 157 EMKDVYSLLTCSAFSILNDWFESEPLKATLLTDGLIGAMVSPHSPSTSYVLLHHVMGGAE 216
++ Y +LT A +L+ WFESEPLKATL TD +IGAM +P+ P + YVLLHHVMG E
Sbjct: 215 QLPQYYQVLTAPAAKVLDQWFESEPLKATLATDAVIGAMTNPYIPGSGYVLLHHVMGSLE 274
Query: 217 GVKGAWAYPEGGMGAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVVT-NGLEIK 275
GV+GAW Y +GGMGA+S A+A SA A G +FT +TV ++ + S R GVV +G E++
Sbjct: 275 GVRGAWGYVQGGMGALSDAIASSATAHGVSIFTEKTVAKVQVSSGGRVQGVVLQDGSEVR 334
Query: 276 AKYVLSNTTAKCTLLDLIPKGNLDERTTQAVQSIDYASPVTKINVALKSIPNFLADPNPS 335
+K VLSN + + T L L P+ L E + +D SPVTKINVA+ +P+FLA PN
Sbjct: 335 SKVVLSNASPQITFLKLTPQEWLPEEFVARIAQLDTKSPVTKINVAVNRLPDFLAAPNTP 394
Query: 336 ENTVQPHHHGSIHLNCEDMQQVFDAYQDATQGIPSTRPMIEMVLPSSLDNTLSPPGHHVC 395
+ PHH SIHLNCED V A++D G+PS RP+IE+ +PSSLD TL+PPG HV
Sbjct: 395 GDQPLPHHQCSIHLNCEDTLLVHQAFEDTLDGLPSKRPLIELCIPSSLDPTLAPPGCHVV 454
Query: 396 LLFTQFTPYKLAGDRDWTEEDKANYATNVFSSIEQYCPGFTQDIVGYEILTPPDLEKEFG 455
LFTQ+TPY LAG + W E+ + YA VF IE Y PGF +VG +ILTPPDLE+ FG
Sbjct: 455 SLFTQYTPYTLAGGKAWDEQQRNTYADRVFDCIEAYAPGFKGSVVGRDILTPPDLERVFG 514
Query: 456 LTGGNIFHGALSLNQLLFNRPLPIQGPSSPFTLIPHLLLCGSGAHPGGGVCGAPGYIAAQ 515
L GGNIFH A+SL+QL F RP+P+ SS + + L LCGSGAHPGGGV GA G AA
Sbjct: 515 LPGGNIFHCAMSLDQLYFARPVPLH--SSYCSPLRGLYLCGSGAHPGGGVMGAAGRNAAH 572
Query: 516 MVNRLMR 522
+V R +R
Sbjct: 573 VVFRDLR 579
Score = 431 (156.8 bits), Expect = 7.8e-144, Sum P(2) = 7.8e-144
Identities = 87/142 (61%), Positives = 108/142 (76%)
Query: 2 AGHNGLVSAAYLARAGLSVAVLERRHVLGGAAVTEEIIPGFQFSRASYLLSLLRPHIYKD 61
AGHNGLV+AAYL R G++ AV ERRHV+GGAAVTEEI+PGF+FSRASYLLSLLRP IY +
Sbjct: 42 AGHNGLVAAAYLQRFGVNTAVFERRHVIGGAAVTEEIVPGFKFSRASYLLSLLRPQIYSE 101
Query: 62 LELKKHGLKLLTRDPRSYTPLSPDKWTNKA-KSLTLGLDPQKNYEQIARFSVKDAQNFEK 120
LELKKHGL+L R+P S+TP+ + K +SL LG D +N +QIA+FS KDAQ F K
Sbjct: 102 LELKKHGLRLHLRNPYSFTPMLEEGTGGKVPRSLLLGTDMVENQKQIAQFSKKDAQAFPK 161
Query: 121 YDHHIEEITNLLDPLFDIAPHD 142
Y+ ++ + +DPL D AP D
Sbjct: 162 YEAFMDRLALAIDPLLDSAPVD 183
>ZFIN|ZDB-GENE-050506-147 [details] [associations]
symbol:pyroxd2 "pyridine nucleotide-disulphide
oxidoreductase domain 2" species:7955 "Danio rerio" [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] ZFIN:ZDB-GENE-050506-147
CTD:84795 HOGENOM:HOG000238954 EMBL:BC091832 IPI:IPI00497804
RefSeq:NP_001243145.1 UniGene:Dr.41107 ProteinModelPortal:Q58EN1
GeneID:553066 KEGG:dre:553066 HOVERGEN:HBG057345 InParanoid:Q58EN1
ArrayExpress:Q58EN1 Uniprot:Q58EN1
Length = 571
Score = 988 (352.9 bits), Expect = 2.1e-141, Sum P(2) = 2.1e-141
Identities = 198/360 (55%), Positives = 243/360 (67%)
Query: 160 DVYSLLTCSAFSILNDWFESEPLKATLLTDGLIGAMVSPHSPSTSYVLLHHVMGGAEGVK 219
D Y L+T A +LN WFESEPL ATL TD +IGA SP++P + YVLLHHVMG E K
Sbjct: 208 DFYELVTAPAMKVLNRWFESEPLIATLATDSVIGANTSPNNPGSGYVLLHHVMGELEKEK 267
Query: 220 GAWAYPEGGMGAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-TNGLEIKAKY 278
G+W Y EGGMG V Q++ARSA++ GA +FT+ V ++ + D A GVV T+G E+ +K
Sbjct: 268 GSWGYVEGGMGGVPQSIARSARSLGADIFTNTDVEQVLIGPDGSAKGVVLTDGTEVHSKV 327
Query: 279 VLSNTTAKCTLLDLIPKGNLDERTTQAVQSIDYASPVTKINVALKSIPNFLADPNPSENT 338
VLSN T T L P+ L E AV IDY SPVTKINVA+ +P+FLA PN ++
Sbjct: 328 VLSNATPHVTFKRLTPQDALPEAFITAVDQIDYTSPVTKINVAVDKLPDFLAAPNGADGK 387
Query: 339 VQPHHHGSIHLNCEDMQQVFDAYQDATQGIPSTRPMIEMVLPSSLDNTLSPPGHHVCLLF 398
PHH SIHLNCE ++ + DAY + G PS+RPMIEM +PS LD TL+PPG HV LF
Sbjct: 388 AGPHHQCSIHLNCESVEVLEDAYWEGQHGRPSSRPMIEMTIPSVLDPTLAPPGCHVVSLF 447
Query: 399 TQFTPYKLAGDRDWTEEDKANYATNVFSSIEQYCPGFTQDIVGYEILTPPDLEKEFGLTG 458
QFTPY L G R WT+EDK + VF +E+Y PGF IVG +ILTP DLE+ FGLTG
Sbjct: 448 IQFTPYLLEGRRAWTDEDKERFGDTVFDWVERYAPGFKASIVGKDILTPADLERVFGLTG 507
Query: 459 GNIFHGALSLNQLLFNRPLP-IQGPSSPFTLIPHLLLCGSGAHPGGGVCGAPGYIAAQMV 517
GNIFHG++SL+QL RPLP I SP + L LCGSG+HPGGGV GA G+ +A V
Sbjct: 508 GNIFHGSMSLDQLYLARPLPSIADYRSP---VKGLYLCGSGSHPGGGVMGAAGWSSALRV 564
Score = 416 (151.5 bits), Expect = 2.1e-141, Sum P(2) = 2.1e-141
Identities = 86/165 (52%), Positives = 112/165 (67%)
Query: 2 AGHNGLVSAAYLARAGLSVAVLERRHVLGGAAVTEEIIPGFQFSRASYLLSLLRPHIYKD 61
AGHNGL+++AYL + GL AVLERRHVLGGAAV+EEIIPGF FSRASYLLSLLRPHIY+D
Sbjct: 32 AGHNGLIASAYLQKGGLRTAVLERRHVLGGAAVSEEIIPGFHFSRASYLLSLLRPHIYQD 91
Query: 62 LELKKHGLKLLTRDPRSYTPLSPDKWTNKA-KSLTLGLDPQKNYEQIARFSVKDAQNFEK 120
LELKKHGLK+ RDP S+TP+ D + +SL LG D ++I +FS KDA+ +
Sbjct: 92 LELKKHGLKVYMRDPYSFTPMLEDGVGGRPPRSLLLGSDLTNTRQEIGKFSEKDAKVYPD 151
Query: 121 YDHHIEEITNLLDPLFDIAPHDFGNLLMYNLFTRRGEMKDVYSLL 165
+ ++E + + PL D P D L +L R ++ + L+
Sbjct: 152 FLRYLETLACAIHPLLDAPPVDIPGLTQGSLTKRLSALRSLKPLV 196
>MGI|MGI:1921830 [details] [associations]
symbol:Pyroxd2 "pyridine nucleotide-disulphide
oxidoreductase domain 2" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] MGI:MGI:1921830
GO:GO:0016491 eggNOG:COG1233 CTD:84795 OrthoDB:EOG4WM4TG
EMBL:AK014668 EMBL:AK038414 EMBL:AK154222 IPI:IPI00345682
RefSeq:NP_083287.2 UniGene:Mm.329858 ProteinModelPortal:Q3U4I7
SMR:Q3U4I7 STRING:Q3U4I7 PhosphoSite:Q3U4I7 PaxDb:Q3U4I7
PRIDE:Q3U4I7 GeneID:74580 KEGG:mmu:74580 InParanoid:Q3U4I7
ChiTaRS:PYROXD2 NextBio:341153 CleanEx:MM_4833409A17RIK
Genevestigator:Q3U4I7 GermOnline:ENSMUSG00000060224 Uniprot:Q3U4I7
Length = 580
Score = 958 (342.3 bits), Expect = 1.9e-138, Sum P(2) = 1.9e-138
Identities = 189/368 (51%), Positives = 247/368 (67%)
Query: 153 TRRGEMKDVYSLLTCSAFSILNDWFESEPLKATLLTDGLIGAMVSPHSPSTSYVLLHHVM 212
T ++ +LT +L+ WFESEPLKATL TD +IGAM SPH+P + YVLLHHVM
Sbjct: 210 TLGAQLPQYCEVLTAPISKVLDQWFESEPLKATLATDAVIGAMTSPHTPGSGYVLLHHVM 269
Query: 213 GGAEGVKGAWAYPEGGMGAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGV-VTNG 271
G EG +GAW+Y +GGMGA+S A+A SA GA +FT +TV ++ ++S+ R GV + +G
Sbjct: 270 GSLEGTQGAWSYVQGGMGALSDAIASSAATRGASIFTEKTVAKVQVNSEGRVQGVTLQDG 329
Query: 272 LEIKAKYVLSNTTAKCTLLDLIPKGNLDERTTQAVQSIDYASPVTKINVALKSIPNFLAD 331
E++++ VLS + + T L+L P+ L + + +D SPVTKINVA+ +PNF A
Sbjct: 330 EEVRSRVVLSCASPQVTFLELTPQEWLPGAFVKRISQLDTQSPVTKINVAVDRLPNFQAA 389
Query: 332 PNPSENTVQPHHHGSIHLNCEDMQQVFDAYQDATQGIPSTRPMIEMVLPSSLDNTLSPPG 391
PN + Q HH SIHLNCED + A++DA G+PS +PMIE+ +PSSLD TL+PPG
Sbjct: 390 PNAPGDQPQGHHQCSIHLNCEDTLLLHQAFEDAKGGLPSQKPMIELCIPSSLDPTLAPPG 449
Query: 392 HHVCLLFTQFTPYKLAGDRDWTEEDKANYATNVFSSIEQYCPGFTQDIVGYEILTPPDLE 451
HV LFTQ+TPY LAG + W E++K YA VF IE Y PGF + ++ +ILTPPDLE
Sbjct: 450 CHVVSLFTQYTPYTLAGGKVWNEQEKNTYADKVFDCIEAYAPGFKRSVLARDILTPPDLE 509
Query: 452 KEFGLTGGNIFHGALSLNQLLFNRPLPIQGPSSPFTLIPHLLLCGSGAHPGGGVCGAPGY 511
+ F L GGNIFHGA+SL+QL F RP+P S + L LCGSGAHPGGGV GA G
Sbjct: 510 RIFRLPGGNIFHGAMSLDQLYFARPVPQH--SDYRCPVQGLYLCGSGAHPGGGVMGAAGR 567
Query: 512 IAAQMVNR 519
AA +V R
Sbjct: 568 NAAHVVFR 575
Score = 418 (152.2 bits), Expect = 1.9e-138, Sum P(2) = 1.9e-138
Identities = 91/165 (55%), Positives = 114/165 (69%)
Query: 2 AGHNGLVSAAYLARAGLSVAVLERRHVLGGAAVTEEIIPGFQFSRASYLLSLLRPHIYKD 61
AGHNGLV+AAYL R G++ AV ERRHV+GGAAVTEEIIPGF+FSRASYLLSLLRP I D
Sbjct: 42 AGHNGLVAAAYLQRLGVNTAVFERRHVIGGAAVTEEIIPGFKFSRASYLLSLLRPQICTD 101
Query: 62 LELKKHGLKLLTRDPRSYTPLSPDKWTNKA-KSLTLGLDPQKNYEQIARFSVKDAQNFEK 120
LELKKHGLKL RDP S+TP+ + N+ +SL LG D N ++I++FS KDAQ F +
Sbjct: 102 LELKKHGLKLHLRDPYSFTPMLEEGTLNRLPRSLLLGTDMAANQKEISQFSRKDAQAFPR 161
Query: 121 YDHHIEEITNLLDPLFDIAPHDFGNLLMYNLFTRRGEMKDVYSLL 165
+ ++ + +DPL D AP D +L R G + + LL
Sbjct: 162 -EEFMKRLVLAIDPLLDAAPVDTTAFHHGSLLQRLGALSTLKPLL 205
>WB|WBGene00018146 [details] [associations]
symbol:F37C4.6 species:6239 "Caenorhabditis elegans"
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] eggNOG:COG1233
EMBL:FO081250 HOGENOM:HOG000238954 OMA:HRPMIEL
GeneTree:ENSGT00390000011684 PIR:T32568 RefSeq:NP_500428.1
ProteinModelPortal:O61196 SMR:O61196 STRING:O61196 PaxDb:O61196
EnsemblMetazoa:F37C4.6.1 EnsemblMetazoa:F37C4.6.2 GeneID:177147
KEGG:cel:CELE_F37C4.6 UCSC:F37C4.6.1 CTD:177147 WormBase:F37C4.6
InParanoid:O61196 NextBio:895552 Uniprot:O61196
Length = 544
Score = 1305 (464.4 bits), Expect = 3.8e-133, P = 3.8e-133
Identities = 274/526 (52%), Positives = 351/526 (66%)
Query: 3 GHNGLVSAAYLARAGLSVAVLERRHVLGGAAVTEEIIPGFQFSRASYLLSLLRPHIYKDL 62
GHNGL +AAYL +AG V VLERRHV+GGAAVTEEI+PGF+FSRASYLLSLLRP + ++L
Sbjct: 23 GHNGLTAAAYLTKAGKKVCVLERRHVVGGAAVTEEIVPGFRFSRASYLLSLLRPVVMQEL 82
Query: 63 ELKKHGLKLLTRDPRSYTPLSPDKWTNKAKSLTLGLDPQKNYEQIARFSVKDAQNFEKYD 122
LKK GL+ R+P S+TP+ N +SL LG+D +N ++IA+FS +DA N+ KY+
Sbjct: 83 NLKKFGLRYHIRNPNSFTPIR-----NTHESLLLGMDMAENQKEIAKFSQRDAGNYPKYE 137
Query: 123 HHIEEITNLLDPLFDIAPHDFGN----LL--MYNLFTRRGEMK-----DVYSLLTCSAFS 171
H I EI + + L D P D LL +Y LF + D Y L+T
Sbjct: 138 HFISEIVHSFEQLMDYEPLDLQKPIHKLLPHLYLLFKTVQPLGLRNAVDFYELMTAPISK 197
Query: 172 ILNDWFESEPLKATLLTDGLIGAMVSPHSPSTSYVLLHHVMGGAEGVKGAWAYPEGGMGA 231
I+N WFES+ LKATL TDG+IG SP P T YVLLHHV+GG + KGAW Y GGMGA
Sbjct: 198 IMNKWFESDVLKATLGTDGVIGLAASPMDPGTGYVLLHHVIGGLDEHKGAWGYVYGGMGA 257
Query: 232 VSQALARSAQASGAQLFTSQTVTEITLDSDKRASGV-VTNGLEIKAKYVLSNTTAKCTLL 290
VS A+A A++ GA+++T Q V E+ LD + A GV ++NG E+ +K V+SN T T
Sbjct: 258 VSNAIAECAKSHGAEIYTEQDVQEVLLDGNV-AKGVRLSNGKELHSKIVMSNATPHVTFN 316
Query: 291 DLIPKGNLDERTTQAVQSIDYASPVTKINVALKSIPNFLADPNPSENTVQPHHHGSIHLN 350
L+ K +L E + + IDY SPVTKINVA+K +PNFLA PN + PHH +IH+N
Sbjct: 317 HLVKKESLPEEFHRNINQIDYTSPVTKINVAVKELPNFLAKPNQGSEPM-PHHQTTIHMN 375
Query: 351 CEDMQQVFDAYQDATQGIPSTRPMIEMVLPSSLDNTL--SPPGHHVCLLFTQFTPYKLAG 408
CE+MQ V DA D G S RP+IEM +PSS+D T+ S GH V LLFTQ+TP+
Sbjct: 376 CENMQVVHDAVMDYKNGRYSRRPVIEMTIPSSVDRTIVDSADGH-VVLLFTQYTPFS-PK 433
Query: 409 DRDWTEEDKANYATNVFSSIEQYCPGFTQDIVGYEILTPPDLEKEFGLTGGNIFHGALSL 468
D +WTEE K YA +VFS I+ Y P F+ ++GY+ILTPPD++ FG+TGGNIFHG++SL
Sbjct: 434 DGEWTEEKKTEYAKHVFSEIDAYAPNFSSSVIGYDILTPPDIQNTFGITGGNIFHGSMSL 493
Query: 469 NQLLFNRPLPIQGPSSPFTLIPHLLLCGSGAHPGGGVCGAPGYIAA 514
+QL +RP I S+ T I L LCGSGAHPGGGV GAPG ++A
Sbjct: 494 DQLYVSRP--ISKWSNYSTPIESLYLCGSGAHPGGGVTGAPGRLSA 537
>TAIR|locus:505006683 [details] [associations]
symbol:AT5G49555 species:3702 "Arabidopsis thaliana"
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005507 "copper ion binding"
evidence=IDA] [GO:0019288 "isopentenyl diphosphate biosynthetic
process, mevalonate-independent pathway" evidence=RCA] [GO:0042744
"hydrogen peroxide catabolic process" evidence=RCA]
InterPro:IPR006076 Pfam:PF01266 InterPro:IPR016040 GO:GO:0005739
EMBL:CP002688 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0016491
GO:GO:0005507 IPI:IPI00529479 UniGene:At.29779 OMA:HRPMIEL
RefSeq:NP_568712.1 UniGene:At.28390 ProteinModelPortal:F4K658
SMR:F4K658 PRIDE:F4K658 EnsemblPlants:AT5G49555.1 GeneID:835017
KEGG:ath:AT5G49555 Uniprot:F4K658
Length = 556
Score = 1141 (406.7 bits), Expect = 9.1e-116, P = 9.1e-116
Identities = 244/532 (45%), Positives = 330/532 (62%)
Query: 3 GHNGLVSAAYLARAGLSVAVLERRHVLGGAAVTEEIIPGFQFSRASYLLSLLRPHIYKDL 62
GHNGL +AAYLAR GLSVAVLERRHV+GGAAVTEEI+PGF+FSR SYL LLRP I ++L
Sbjct: 22 GHNGLTAAAYLARGGLSVAVLERRHVIGGAAVTEEIVPGFKFSRCSYLQGLLRPCIIREL 81
Query: 63 ELKKHGLKLLTRDPRSYTP--------LSPDKWTNKAKSLTLG---LDPQKNYE-QIARF 110
EL +HGLKLL R P S+TP L PD+ N ++ D YE Q+ RF
Sbjct: 82 ELGRHGLKLLKRSPSSFTPCLDGRYLLLGPDQDLNHSEISKFSKHDADAYPRYEKQLERF 141
Query: 111 -SVKDAQNFEKYDHHIEEITNLLDPLFD-IAPHDF-GNLLMYNLFTRRGEMKDVYSLLTC 167
D ++ ++ D L + + F L + +M LL
Sbjct: 142 CGFMDPLLDSTPPESLQSASSFNDKLSNKMYKSAFWARCLRQAVSLGHKDMVAFMDLLLA 201
Query: 168 SAFSILNDWFESEPLKATLLTDGLIGAMVSPHSPSTSYVLLHHVMGGAEGVKGAWAYPEG 227
A +LN+WFES+ LKA+L TD +IG+ S H+P + YVLLHHVMG +G KG W+Y EG
Sbjct: 202 PASKVLNNWFESDVLKASLATDAVIGSTASVHTPGSGYVLLHHVMGETDGEKGIWSYVEG 261
Query: 228 GMGAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVV-TNGLEIKAKYVLSNTTAK 286
GMG+VS A+A +A+ +GA++FT+ V+EI + GV+ +G +++ +LSN T
Sbjct: 262 GMGSVSMAIANAAKEAGAEIFTNAEVSEILTEDSSIVKGVLLADGTRVESSAILSNATPY 321
Query: 287 CTLLDLIPKGNLDERTTQAVQSIDYASPVTKINVALKSIPNFLADPNPSENTVQPHHHGS 346
T ++L+P L E A+++ DY+S TKIN+A+ +P F N + + P H G+
Sbjct: 322 RTYVELVPTNVLPENFVSAIKNSDYSSATTKINLAVDKLPQFQCC-NTNHSGPGPEHFGT 380
Query: 347 IHLNCEDMQQVFDAYQDATQGIPSTRPMIEMVLPSSLDNTLSPPGHHVCLLFTQFTPYKL 406
IH+ E M +V A D+ G+PS RP+IEM +PS+LDNT+SPPG HV LF Q+TPYK
Sbjct: 381 IHIGAESMDEVHSACHDSENGLPSRRPVIEMTIPSTLDNTISPPGKHVINLFIQYTPYK- 439
Query: 407 AGDRDWTEED-KANYATNVFSSIEQYCPGFTQDIVGYEILTPPDLEKEFGLTGGNIFHGA 465
D W + + +A F I++Y PGF+ I+ Y++LTPPDLE+E GLTGGNIFHGA
Sbjct: 440 PSDGSWEDPTYREAFAQRCFKLIDEYAPGFSSSIISYDMLTPPDLEREIGLTGGNIFHGA 499
Query: 466 LSLNQLLFNRPLPIQGPSSPFTLIPHLLLCGSGAHPGGGVCGAPGYIAAQMV 517
+ L+ L RP ++G S+ + + L LCGSGAHPGGGV GAPG AA +V
Sbjct: 500 MGLDSLFLMRP--VKGWSNYRSPLKGLYLCGSGAHPGGGVMGAPGRNAAHVV 549
>UNIPROTKB|Q8N2H3 [details] [associations]
symbol:PYROXD2 "Pyridine nucleotide-disulfide
oxidoreductase domain-containing protein 2" species:9606 "Homo
sapiens" [GO:0016491 "oxidoreductase activity" evidence=IEA]
EMBL:CH471066 GO:GO:0016491 eggNOG:COG1233 EMBL:AL139243 CTD:84795
HOGENOM:HOG000238954 OrthoDB:EOG4WM4TG EMBL:AK075265 EMBL:BC006131
IPI:IPI00296156 RefSeq:NP_116098.2 UniGene:Hs.238303
ProteinModelPortal:Q8N2H3 SMR:Q8N2H3 IntAct:Q8N2H3 STRING:Q8N2H3
PhosphoSite:Q8N2H3 DMDM:109820933 PRIDE:Q8N2H3 DNASU:84795
Ensembl:ENST00000370575 GeneID:84795 KEGG:hsa:84795 UCSC:uc001kpc.3
GeneCards:GC10M100134 HGNC:HGNC:23517 HPA:HPA037566
neXtProt:NX_Q8N2H3 PharmGKB:PA165549043 InParanoid:Q8N2H3
OMA:HRPMIEL PhylomeDB:Q8N2H3 GenomeRNAi:84795 NextBio:74960
ArrayExpress:Q8N2H3 Bgee:Q8N2H3 CleanEx:HS_C10orf33
Genevestigator:Q8N2H3 GermOnline:ENSG00000119943 Uniprot:Q8N2H3
Length = 581
Score = 1005 (358.8 bits), Expect = 2.3e-101, P = 2.3e-101
Identities = 211/435 (48%), Positives = 277/435 (63%)
Query: 101 QKNYEQIARFSVKDAQNFEKYDHHIE-EITNLLDPL-FDIAPHDFGNLL--MYNLFTRR- 155
QK Q ++ + +E++ H + I LLD D+A G+LL M +L T +
Sbjct: 145 QKQIAQFSQKDAQVFPKYEEFMHRLALAIDPLLDAAPVDMAAFQHGSLLQRMRSLSTLKP 204
Query: 156 ---------GEMKDVYSLLTCSAFSILNDWFESEPLKATLLTDGLIGAMVSPHSPSTSYV 206
++ Y +LT +L+ WFESEPLKATL TD +IGAM SPH+P + YV
Sbjct: 205 LLKAGRILGAQLPRYYEVLTAPITKVLDQWFESEPLKATLATDAVIGAMTSPHTPGSGYV 264
Query: 207 LLHHVMGGAEGVKGAWAYPEGGMGAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASG 266
LLHHVMGG EG++GAW Y +GGMGA+S A+A SA GA +FT +TV ++ ++S+ G
Sbjct: 265 LLHHVMGGLEGMQGAWGYVQGGMGALSDAIASSATTHGASIFTEKTVAKVQVNSEGCVQG 324
Query: 267 VVT-NGLEIKAKYVLSNTTAKCTLLDLIPKGNLDERTTQAVQSIDYASPVTKINVALKSI 325
VV +G E+++K VLSNT+ + T L L P+ L E + + +D SPVTKINVA+ +
Sbjct: 325 VVLEDGTEVRSKMVLSNTSPQITFLKLTPQEWLPEEFLERISQLDTRSPVTKINVAVDRL 384
Query: 326 PNFLADPNPSENTVQPHHHGSIHLNCEDMQQVFDAYQDATQGIPSTRPMIEMVLPSSLDN 385
P+FLA PN PHH SIHLNCED + A++DA G+PS RP+IE+ +PSSLD
Sbjct: 385 PSFLAAPNAPRGQPLPHHQCSIHLNCEDTLLLHQAFEDAMDGLPSHRPVIELCIPSSLDP 444
Query: 386 TLSPPGHHVCLLFTQFTPYKLAGDRDWTEEDKANYATNVFSSIEQYCPGFTQDIVGYEIL 445
TL+PPG HV LFTQ+ PY LAG + W E+++ YA VF IE Y PGF +VG +IL
Sbjct: 445 TLAPPGCHVVSLFTQYMPYTLAGGKAWDEQERDAYADRVFDCIEVYAPGFKDSVVGRDIL 504
Query: 446 TPPDLEKEFGLTGGNIFHGALSLNQLLFNRPLPIQ-GPSSPFTLIPHLLLCGSGAHPGGG 504
TPPDLE+ FGL GGNIFH A+SL+QL F RP+P+ G P + L LCGSGAHPGGG
Sbjct: 505 TPPDLERIFGLPGGNIFHCAMSLDQLYFARPVPLHSGYRCP---LQGLYLCGSGAHPGGG 561
Query: 505 VCGAPGYIAAQMVNR 519
V GA G AA + R
Sbjct: 562 VMGAAGRNAAHVAFR 576
Score = 436 (158.5 bits), Expect = 4.6e-41, P = 4.6e-41
Identities = 92/165 (55%), Positives = 114/165 (69%)
Query: 2 AGHNGLVSAAYLARAGLSVAVLERRHVLGGAAVTEEIIPGFQFSRASYLLSLLRPHIYKD 61
AGHNGLV+AAYL R G++ AV ERRHV+GGAAVTEEIIPGF+FSRASYLLSLLRP IY D
Sbjct: 42 AGHNGLVAAAYLQRLGVNTAVFERRHVIGGAAVTEEIIPGFKFSRASYLLSLLRPQIYTD 101
Query: 62 LELKKHGLKLLTRDPRSYTPLSPDKWTNKA-KSLTLGLDPQKNYEQIARFSVKDAQNFEK 120
LELKKHGL+L R+P S+TP+ + +K + L LG D +N +QIA+FS KDAQ F K
Sbjct: 102 LELKKHGLRLHLRNPYSFTPMLEEGAGSKVPRCLLLGTDMAENQKQIAQFSQKDAQVFPK 161
Query: 121 YDHHIEEITNLLDPLFDIAPHDFGNLLMYNLFTRRGEMKDVYSLL 165
Y+ + + +DPL D AP D +L R + + LL
Sbjct: 162 YEEFMHRLALAIDPLLDAAPVDMAAFQHGSLLQRMRSLSTLKPLL 206
>RGD|1303232 [details] [associations]
symbol:Pyroxd2 "pyridine nucleotide-disulphide oxidoreductase
domain 2" species:10116 "Rattus norvegicus" [GO:0016491
"oxidoreductase activity" evidence=IEA] RGD:1303232 GO:GO:0016491
eggNOG:COG1233 CTD:84795 HOGENOM:HOG000238954 OrthoDB:EOG4WM4TG
OMA:HRPMIEL EMBL:BC079368 IPI:IPI00470325 RefSeq:NP_001004261.1
UniGene:Rn.102445 ProteinModelPortal:Q68FT3 STRING:Q68FT3
PRIDE:Q68FT3 Ensembl:ENSRNOT00000021257 GeneID:309381
KEGG:rno:309381 UCSC:RGD:1303232 GeneTree:ENSGT00390000011684
InParanoid:Q68FT3 NextBio:660678 Genevestigator:Q68FT3
GermOnline:ENSRNOG00000015807 Uniprot:Q68FT3
Length = 581
Score = 979 (349.7 bits), Expect = 1.3e-98, P = 1.3e-98
Identities = 210/434 (48%), Positives = 273/434 (62%)
Query: 101 QKNYEQIARFSVKDAQNFEKYDHHIE-EITNLLDPL-FDIAPHDFGNLL--MYNLFTRR- 155
QK Q +R + +E++ + I LLD DIA G+LL + L T R
Sbjct: 145 QKQISQFSRKDAQAFPRYEEFMKRLVLAIDPLLDAAPVDIAALQHGSLLQRLRALSTLRP 204
Query: 156 ---------GEMKDVYSLLTCSAFSILNDWFESEPLKATLLTDGLIGAMVSPHSPSTSYV 206
++ Y +LT +L+ WFESEPLKATL TD +IGAM SPH+P + YV
Sbjct: 205 LLKAGRTLGAQLPQYYEVLTAPISKVLDQWFESEPLKATLATDAVIGAMTSPHTPGSGYV 264
Query: 207 LLHHVMGGAEGVKGAWAYPEGGMGAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASG 266
LLHHVMG EG++GAW+Y +GGMGA+S A+A SA A GA +FT +TV ++ ++S+ R G
Sbjct: 265 LLHHVMGSLEGMQGAWSYVQGGMGALSDAIASSATAHGASIFTEKTVAKVQVNSEGRVQG 324
Query: 267 VVTNG-LEIKAKYVLSNTTAKCTLLDLIPKGNLDERTTQAVQSIDYASPVTKINVALKSI 325
VV G E++++ VLS + + T L+L P+ L + + +D SPVTKINVA+ +
Sbjct: 325 VVLQGGEEVRSRVVLSCASPQVTFLELTPQEWLPGAFVKRISQLDTQSPVTKINVAVDRL 384
Query: 326 PNFLADPNPSENTVQPHHHGSIHLNCEDMQQVFDAYQDATQGIPSTRPMIEMVLPSSLDN 385
PNF A PN + Q HH SIHLNCED + A++DA G+PS RPMIE+ +PSSLD
Sbjct: 385 PNFQAAPNAPGDQPQAHHQCSIHLNCEDTLLLHQAFEDAKGGLPSQRPMIELCIPSSLDP 444
Query: 386 TLSPPGHHVCLLFTQFTPYKLAGDRDWTEEDKANYATNVFSSIEQYCPGFTQDIVGYEIL 445
TL+P G HV LFTQ+TPY LAG + W E+ K YA VF IE Y PGF + ++G +IL
Sbjct: 445 TLAPTGCHVVSLFTQYTPYTLAGGKVWDEQKKNTYADKVFDCIEAYAPGFKRSVLGRDIL 504
Query: 446 TPPDLEKEFGLTGGNIFHGALSLNQLLFNRPLPIQGPSSPFTLIPHLLLCGSGAHPGGGV 505
TP DLE+ FGL GGNIFHGA+SL+QL F RP+P S + L LCGSGAHPGGGV
Sbjct: 505 TPQDLERIFGLPGGNIFHGAMSLDQLYFARPVPQH--SDYRCPVQGLYLCGSGAHPGGGV 562
Query: 506 CGAPGYIAAQMVNR 519
GA G AA +V R
Sbjct: 563 MGAAGRNAAHIVFR 576
Score = 442 (160.7 bits), Expect = 1.1e-41, P = 1.1e-41
Identities = 93/165 (56%), Positives = 117/165 (70%)
Query: 2 AGHNGLVSAAYLARAGLSVAVLERRHVLGGAAVTEEIIPGFQFSRASYLLSLLRPHIYKD 61
AGHNGLV+AAYL R G++ AV ERRHV+GGAAVTEEIIPGF+FSRASYLLSLLRP IY D
Sbjct: 42 AGHNGLVAAAYLQRLGVNTAVFERRHVIGGAAVTEEIIPGFKFSRASYLLSLLRPQIYTD 101
Query: 62 LELKKHGLKLLTRDPRSYTPLSPDKWTNKA-KSLTLGLDPQKNYEQIARFSVKDAQNFEK 120
LELKKHGLKL R+P S+TP+ + +K +SL LG D +N +QI++FS KDAQ F +
Sbjct: 102 LELKKHGLKLHLRNPYSFTPMLEEGTLSKPPRSLLLGTDVAENQKQISQFSRKDAQAFPR 161
Query: 121 YDHHIEEITNLLDPLFDIAPHDFGNLLMYNLFTRRGEMKDVYSLL 165
Y+ ++ + +DPL D AP D L +L R + + LL
Sbjct: 162 YEEFMKRLVLAIDPLLDAAPVDIAALQHGSLLQRLRALSTLRPLL 206
>UNIPROTKB|O07794 [details] [associations]
symbol:Rv3829c "PROBABLE DEHYDROGENASE" species:83332
"Mycobacterium tuberculosis H37Rv" [GO:0005829 "cytosol"
evidence=IDA] GO:GO:0005829 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0016491 EMBL:BX842584 EMBL:CP003248
PIR:A70523 RefSeq:NP_218346.1 RefSeq:NP_338490.1
RefSeq:YP_006517326.1 SMR:O07794 EnsemblBacteria:EBMYCT00000003016
EnsemblBacteria:EBMYCT00000072616 GeneID:13317453 GeneID:886157
GeneID:926325 KEGG:mtc:MT3937 KEGG:mtu:Rv3829c KEGG:mtv:RVBD_3829c
PATRIC:18130415 TubercuList:Rv3829c HOGENOM:HOG000049383
OMA:VNGMAGL ProtClustDB:CLSK792743 Uniprot:O07794
Length = 536
Score = 275 (101.9 bits), Expect = 6.8e-28, Sum P(2) = 6.8e-28
Identities = 100/375 (26%), Positives = 154/375 (41%)
Query: 148 MYNLFTRRGEMKDVYSLLTCSAFSILNDWFESEPLKATLLTDGLIGAMVSPH-SPST--S 204
MY T E + +L S +L+ F L + A+ + + P+T S
Sbjct: 150 MYACATNEFERSAIDDMLFGSVTDVLDRHFPDREKHGALRGSMTVLAVNTLYRGPATPGS 209
Query: 205 YVLLHHVMGGAEGVKGAWAYPEGGMGAVSQALARSAQASGAQLFTSQTVTEITLDSDK-- 262
L +G EG W GG+GA++ L++ + +G ++ VTEI +D+ +
Sbjct: 210 AAALAFGLGVPEGDFVRWKKLRGGIGALTTHLSQLLERTGGEVRLRSKVTEIVVDNSRSS 269
Query: 263 -RASGVVTN-GLEIKAKYVLSNTTAKCTLLDLIPKGNLDERTTQAVQSIDYASPVTKINV 320
R GV T G + + V+S T+ +LI L ID+ +++
Sbjct: 270 ARVRGVRTAAGDTLTSPIVVSAIAPDVTINELIDPAVLPSEIRDRYLRIDHRGSYLQMHF 329
Query: 321 ALKSIPNFLADPNPSENTVQPHHHGSIHLNCEDMQQVFDAYQDATQGIPSTRPMIEMVLP 380
AL P F A P + N P S+ + C +QV ++D +GI P + + +P
Sbjct: 330 ALAQPPAFAA-PYQALN--DPSMQASMGIFCTP-EQVQQQWEDCRRGIVPADPTVVLQIP 385
Query: 381 SSLDNTLSPPGHHVCLLFTQFTPYKLAGDRDWTEEDKANYATNVFSSIEQYCPGFTQDIV 440
S D +L+P G F + P + K NV I + P F I+
Sbjct: 386 SLHDPSLAPAGKQAASAFAMWFPIEGGSKYGGYGRAKVEMGQNVIDKITRLAPNFKGSIL 445
Query: 441 GYEILTPPDLEKEFGLTGGNIFHGALSLNQLLFNRPLPIQGPSSPFTLIPHLLLCGSGAH 500
Y TP + FG GG+ H L +Q+ NRP P P I L L +G H
Sbjct: 446 RYTTFTPKHMGVMFGAPGGDYCHALLHSDQIGPNRPGPKGFIGQPIP-IAGLYLGSAGCH 504
Query: 501 PGGGVCGAPGYIAAQ 515
G G+ PGY AA+
Sbjct: 505 GGPGITFIPGYNAAR 519
Score = 106 (42.4 bits), Expect = 6.8e-28, Sum P(2) = 6.8e-28
Identities = 22/46 (47%), Positives = 28/46 (60%)
Query: 2 AGHNGLVSAAYLARAGLSVAVLERRHVLGGAAVTEEIIPGFQFSRA 47
AGHNGL +A L RAGL A L+ + GG A T E+ G++F A
Sbjct: 11 AGHNGLTAAVLLQRAGLRTACLDAKRYAGGMASTVELFDGYRFEIA 56
>UNIPROTKB|P21685 [details] [associations]
symbol:crtI "Phytoene desaturase (lycopene-forming)"
species:553 "Pantoea ananatis" [GO:0016120 "carotene biosynthetic
process" evidence=IDA] [GO:0016627 "oxidoreductase activity, acting
on the CH-CH group of donors" evidence=IDA] [GO:0071949 "FAD
binding" evidence=IDA] UniPathway:UPA00803 InterPro:IPR002937
InterPro:IPR014105 Pfam:PF01593 InterPro:IPR008150 GO:GO:0005886
GO:GO:0071949 GO:GO:0016117 GO:GO:0015979 GO:GO:0015995
GO:GO:0016627 PANTHER:PTHR10668:SF3 TIGRFAMs:TIGR02734
PROSITE:PS00982 EMBL:D90087 PIR:D37802 PDB:4DGK PDBsum:4DGK
ProteinModelPortal:P21685 BioCyc:MetaCyc:MONOMER-15564
GO:GO:0016120 Uniprot:P21685
Length = 492
Score = 129 (50.5 bits), Expect = 7.5e-13, Sum P(2) = 7.5e-13
Identities = 67/294 (22%), Positives = 120/294 (40%)
Query: 2 AGHNGLVSAAYLARAGLSVAVLERRHVLGGAAVTEEIIPGFQFSRASYLLSLLRPHIYKD 61
AG GL A L AG+ V +LE+R GG A E GF F +++ P ++
Sbjct: 9 AGFGGLALAIRLQAAGIPVLLLEQRDKPGGRAYVYED-QGFTFDAGPTVIT--DPSAIEE 65
Query: 62 L-ELKKHGLKLLTRDPRSYTPLSPDKWTNKAKSLTLGLDPQKNYEQIARFSVKDAQNFEK 120
L L LK + TP W + K D + QI +F+ +D + + +
Sbjct: 66 LFALAGKQLKEYV-ELLPVTPFYRLCWES-GKVFNYDNDQTRLEAQIQQFNPRDVEGYRQ 123
Query: 121 YDHHIEEITNLLDPLFDIAPHDFGNLLMYNLFTRRGEMKDVYSLLTCSAFSILNDWFESE 180
+ + + + + F L ++ ++ + + S +S + + E E
Sbjct: 124 FLDYSRAVFK--EGYLKLGTVPF--LSFRDMLRAAPQLAKLQAWR--SVYSKVASYIEDE 177
Query: 181 PLKATLLTDGL-IGAMVSPHSPSTSYVLLHHVMGGAEGVKGAWAYPEGGMGAVSQALARS 239
L+ L +G +P + S+ Y L+H + E G W +P GG GA+ Q + +
Sbjct: 178 HLRQAFSFHSLLVGG--NPFATSSIYTLIHAL----EREWGVW-FPRGGTGALVQGMIKL 230
Query: 240 AQASGAQLFTSQTVTEITLDSDKRASGVVTNGLEIKAKYVLSNTTAKCTLLDLI 293
Q G ++ + V+ + +K + + +G + V SN T DL+
Sbjct: 231 FQDLGGEVVLNARVSHMETTGNKIEAVHLEDGRRFLTQAVASNADVVHTYRDLL 284
Score = 120 (47.3 bits), Expect = 7.5e-13, Sum P(2) = 7.5e-13
Identities = 39/134 (29%), Positives = 57/134 (42%)
Query: 380 PSSLDNTLSPPGHHVCLLFTQFTPYKLAG--DRDWTEEDKANYATNVFSSIEQ-YCPGFT 436
P D++L+P G C + P G + DWT E +F+ +EQ Y PG
Sbjct: 355 PCVTDSSLAPEG---CGSYYVLAPVPHLGTANLDWTVEGP-KLRDRIFAYLEQHYMPGLR 410
Query: 437 QDIVGYEILTPPDLEKEFGLTGGNIFHGALSLNQLLFNRPLPIQGPSSPFTLIPHLLLCG 496
+V + + TP D + G+ F L Q + RP + I +L L G
Sbjct: 411 SQLVTHRMFTPFDFRDQLNAYHGSAFSVEPVLTQSAWFRP------HNRDKTITNLYLVG 464
Query: 497 SGAHPGGGVCGAPG 510
+G HPG G+ G G
Sbjct: 465 AGTHPGAGIPGVIG 478
>UNIPROTKB|Q8X0Z0 [details] [associations]
symbol:carB "Phytoene dehydrogenase" species:5127 "Fusarium
fujikuroi" [GO:0016120 "carotene biosynthetic process"
evidence=IMP] [GO:0016166 "phytoene dehydrogenase activity"
evidence=IMP] InterPro:IPR014105 InterPro:IPR008150 GO:GO:0016117
GO:GO:0015979 GO:GO:0015995 TIGRFAMs:TIGR02734 PROSITE:PS00982
GO:GO:0016120 GO:GO:0016166 EMBL:AJ426418 ProteinModelPortal:Q8X0Z0
Uniprot:Q8X0Z0
Length = 570
Score = 196 (74.1 bits), Expect = 2.9e-12, P = 2.9e-12
Identities = 93/342 (27%), Positives = 157/342 (45%)
Query: 2 AGHNGLVSAAYLARAGLSVAVLERRHVLGGAAVTEEIIPGFQFSRASYLLSLLR--PHIY 59
AG G+ +AA LA+AG V +LE+ GG G +F + LL L R I+
Sbjct: 13 AGVGGVSTAARLAKAGFKVTILEKNDFTGGRCSLIHN-DGHRFDQGPSLLLLPRFFHEIF 71
Query: 60 KDL--ELKKHGLKLLTRDPRSYTPLSPDKWTNKAKSLTLGLDPQKNYEQIARFSVKDAQN 117
+DL L G++LL +P +Y + W S + D K + I +V+
Sbjct: 72 QDLGTSLTAEGVELLKCEP-NY-----NIWFGDGSSFEMSTDLTKMKKAIE--AVEGIDG 123
Query: 118 FEKYDHHIEEITNLLDPLFD-IAPHDFGNLLMYNLFTRRGEMKDVYSLLTC-SAFSILND 175
FE+Y ++E + + + +F ++L R + +++++ S ++ +
Sbjct: 124 FERYLGFLQESHRHYEVSVESVLRRNFPSILS---LARPEVLFNLFNIHPLESIWTRASK 180
Query: 176 WFESEPLKATLLTDGLIGAMVSPHSPSTSYVLLHHVMGGAEGVKGAWAYPEGGMGAVSQA 235
+F +E L+ + T G + +SP +Y LL + AEG+ YP GG V +A
Sbjct: 181 YFWTERLRR-VFTFGSMYMGMSPFDAPGTYSLLQYTEL-AEGI----LYPRGGFHKVVEA 234
Query: 236 LARSAQASGAQLFTSQTVTEITLD-SDKRASGVV-TNGLEIKAKYVLSNTTAKCTLLDLI 293
L Q G + S V I++D + +A+GVV ++G + + V+SN T +L+
Sbjct: 235 LVNVGQRLGVEYRLSTGVKSISIDQATGKANGVVLSDGTHLPSDIVISNADLVYTYNNLL 294
Query: 294 PK----GNLDERTTQAVQSIDYASPVTKINVALKSIPNFLAD 331
PK +L +R T SI + +KI L + FLAD
Sbjct: 295 PKTSYADSLSKRETSC-SSISFYWSASKIVPELNAHNIFLAD 335
Score = 147 (56.8 bits), Expect = 7.0e-07, P = 7.0e-07
Identities = 105/444 (23%), Positives = 188/444 (42%)
Query: 87 WTNKAKSLTLGLDPQKNYEQIARFSVKDAQNFEKYDHHIEEITNLLDPLFD-IAPHDFGN 145
W S + D K + I +V+ FE+Y ++E + + + +F +
Sbjct: 95 WFGDGSSFEMSTDLTKMKKAIE--AVEGIDGFERYLGFLQESHRHYEVSVESVLRRNFPS 152
Query: 146 LLMYNLFTRRGEMKDVYSLLTC-SAFSILNDWFESEPLKATLLTDGLIGAMVSPHSPSTS 204
+L R + +++++ S ++ + +F +E L+ + T G + +SP +
Sbjct: 153 ILS---LARPEVLFNLFNIHPLESIWTRASKYFWTERLRR-VFTFGSMYMGMSPFDAPGT 208
Query: 205 YVLLHHVMGGAEGVKGAWAYPEGGMGAVSQALARSAQASGAQLFTSQTVTEITLD-SDKR 263
Y LL + AEG+ YP GG V +AL Q G + S V I++D + +
Sbjct: 209 YSLLQYTEL-AEGI----LYPRGGFHKVVEALVNVGQRLGVEYRLSTGVKSISIDQATGK 263
Query: 264 ASGVV-TNGLEIKAKYVLSNTTAKCTLLDLIPK----GNLDERTTQAVQSIDYASPVTKI 318
A+GVV ++G + + V+SN T +L+PK +L +R T SI + +KI
Sbjct: 264 ANGVVLSDGTHLPSDIVISNADLVYTYNNLLPKTSYADSLSKRETSC-SSISFYWSASKI 322
Query: 319 NVALKSIPNFLADP-NPSENTVQPHHHGSIHLNCEDMQQVFDAYQDATQGIPSTRPMIEM 377
L + FLAD S +++ H + E V + P + I +
Sbjct: 323 VPELNAHNIFLADEYQESFDSIFKEHL----IPSEPSFYVNVPSRIDPSAAPEGKDSIVV 378
Query: 378 VLPSSLDNTLSPP-GHHVCLLFTQFTPYKLAGDRDWTEEDKANYATNVFSSIEQYCPGFT 436
++P + + LS G H L + + L +DW + T V +++
Sbjct: 379 LVP--VGHLLSDSEGTHRGLSKSGNSG-GLETSQDWDKMISLARDT-VIATMRARIGVDL 434
Query: 437 QDIVGYEIL-TPPDLEKEFGLTGGNIFHGALSLNQLLFNRPLPIQGPSSPFTLIPHLLLC 495
++ EI+ TP +++F L G I L L+ + N L + P + + +L
Sbjct: 435 APLIENEIINTPFTWQEKFNLDKGAI----LGLSHSIMN-VLAFR-PGTQHSKYKNLYFA 488
Query: 496 GSGAHPGGGV--CGAPGYIAAQMV 517
G+ HPG GV C A I A+ +
Sbjct: 489 GASTHPGTGVPVCIAGSKIVAEQI 512
>UNIPROTKB|A8J9E9 [details] [associations]
symbol:CHLREDRAFT_196597 "Carotenoid isomerase"
species:3055 "Chlamydomonas reinhardtii" [GO:0009507 "chloroplast"
evidence=ISS] [GO:0016117 "carotenoid biosynthetic process"
evidence=ISS] [GO:0046608 "carotenoid isomerase activity"
evidence=ISS] InterPro:IPR014101 GO:GO:0009507 GO:GO:0016117
eggNOG:COG1233 ProtClustDB:CLSN2680687 GO:GO:0046608 GO:GO:0009662
PANTHER:PTHR10668:SF30 TIGRFAMs:TIGR02730 EMBL:DS496146
RefSeq:XP_001698231.1 ProteinModelPortal:A8J9E9 STRING:A8J9E9
PRIDE:A8J9E9 EnsemblPlants:EDO99516 GeneID:5723787
KEGG:cre:CHLREDRAFT_196597 Uniprot:A8J9E9
Length = 568
Score = 108 (43.1 bits), Expect = 2.5e-09, Sum P(3) = 2.5e-09
Identities = 31/86 (36%), Positives = 42/86 (48%)
Query: 220 GAWAYPEGGMGAVSQALARSAQASGAQLFTSQTVTEITL----DSDKRASGV-VTNGLEI 274
G YP GG+G + + LA + G ++ V EI L D +RA+GV + +G
Sbjct: 289 GGINYPVGGVGRIGEELAAGIEEYGGKIVYKANVKEILLSPQPDGSQRATGVRLADGRVF 348
Query: 275 KAKYVLSNTTAKCTLLDLIPKGNLDE 300
K K V+SN T T LI K L E
Sbjct: 349 KGKTVISNATRWDTFEGLIGKDKLPE 374
Score = 94 (38.1 bits), Expect = 2.5e-09, Sum P(3) = 2.5e-09
Identities = 39/137 (28%), Positives = 59/137 (43%)
Query: 372 RPMIEMVLPSSLDNTLSPPGHHVCLLFTQFTPYKLAG-DRDWTEEDKANYATNVFSSIEQ 430
R ++ + LP+ LD +L+PPG+H+ F G + E K A ++ ++
Sbjct: 422 RGVLFVSLPTVLDPSLAPPGNHIVHAFVPDWIEDWQGLSVEEYEAKKEAVADDICRRLDA 481
Query: 431 YCPGFTQDIVGYEILTPPDLEKEFGLTGGNIFHGALSLNQLLFNRPLPIQGPSSPF--TL 488
PG + +I E+ TP + G +G + RPL + S PF T
Sbjct: 482 ILPGLSSNITFREVGTPRTHRRFLNREDGT--YGPIPSR-----RPLGML--SMPFNTTD 532
Query: 489 IPHLLLCGSGAHPGGGV 505
IP L G A PG GV
Sbjct: 533 IPGLYCVGDSAFPGQGV 549
Score = 57 (25.1 bits), Expect = 2.5e-09, Sum P(3) = 2.5e-09
Identities = 14/31 (45%), Positives = 18/31 (58%)
Query: 3 GHNGLVSAAYLARAGLSVAVLERRHVLGGAA 33
G GL +AA L G V VLE+ + GG+A
Sbjct: 73 GMGGLATAARLVAKGAKVVVLEKYLLPGGSA 103
>TAIR|locus:2009395 [details] [associations]
symbol:AT1G57770 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0016117 "carotenoid
biosynthetic process" evidence=IBA] [GO:0016491 "oxidoreductase
activity" evidence=IEA;ISS] [GO:0046608 "carotenoid isomerase
activity" evidence=IBA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009507 "chloroplast" evidence=IDA]
InterPro:IPR014101 EMBL:CP002684 GO:GO:0009507 GO:GO:0016117
eggNOG:COG1233 GO:GO:0046608 PANTHER:PTHR10668:SF30 EMBL:AC079732
OMA:PQCESFM ProtClustDB:CLSN2690470 EMBL:AY065278 EMBL:AY133831
IPI:IPI00524521 PIR:A96612 RefSeq:NP_176088.2 UniGene:At.28533
ProteinModelPortal:Q9FVR9 SMR:Q9FVR9 STRING:Q9FVR9 PaxDb:Q9FVR9
PRIDE:Q9FVR9 EnsemblPlants:AT1G57770.1 GeneID:842152
KEGG:ath:AT1G57770 TAIR:At1g57770 InParanoid:Q9FVR9
PhylomeDB:Q9FVR9 ArrayExpress:Q9FVR9 Genevestigator:Q9FVR9
Uniprot:Q9FVR9
Length = 574
Score = 101 (40.6 bits), Expect = 3.0e-09, Sum P(3) = 3.0e-09
Identities = 29/86 (33%), Positives = 43/86 (50%)
Query: 224 YPEGGMGAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVVTNGLEIKA-KYVLSN 282
YP G GAV +AL R + G +L V I +++ K + NG ++A K V+SN
Sbjct: 290 YPIDGTGAVVEALVRGLEKFGGRLSLKSHVENIVIENGKAVGVKLRNGQFVRARKAVVSN 349
Query: 283 TTAKCTLLDLIPKGNLDERTTQAVQS 308
+ TL L+P G L E + V +
Sbjct: 350 ASMWDTL-KLLPPGALPESYVKGVNT 374
Score = 92 (37.4 bits), Expect = 3.0e-09, Sum P(3) = 3.0e-09
Identities = 45/171 (26%), Positives = 75/171 (43%)
Query: 352 EDMQQVFDAYQDATQGIPSTRPMIEMVLPSSLDNTLSPPGHHVCLLFTQFT-PYKL-AG- 408
+D++ D +G+ + + ++ + +PS L L+PPG HV + T P+ L G
Sbjct: 395 DDLEIHHIVVNDWDRGVDADQNVVLISVPSVLSPNLAPPGKHVLHAYCPGTEPFGLWEGL 454
Query: 409 DRDWTEED--KANYATNVFSSIEQYCP-GFTQDIVGYEILTPPDLEKEFGLTGGNIFHGA 465
DR E K+ + ++ ++E+ GF ++ ++ P + F + A
Sbjct: 455 DRRSAEYKNLKSQRSEVMWRAVERALGLGFKREKCEVSLVGTPLTHQRFLRRNRGTYGPA 514
Query: 466 LSLNQLLFNRPLPIQGPSSPFTLIPHLLLCGSGAHPGGGV--CGAPGYIAA 514
+ + F P G S+P IP LL CG PG GV A G I A
Sbjct: 515 IEAGKGTF----P--GHSTP---IPQLLCCGDSTFPGIGVPAVAASGAIVA 556
Score = 66 (28.3 bits), Expect = 3.0e-09, Sum P(3) = 3.0e-09
Identities = 22/54 (40%), Positives = 27/54 (50%)
Query: 2 AGHNGLVSAAYLARAGLSVAVLERRHVLGGAAVTEEIIPGFQFSRASYLLSLLR 55
+G GL A LAR V VLE GGAA + EI G++F L S L+
Sbjct: 60 SGIGGLCCGALLARYDQDVIVLESHDHPGGAAHSFEI-KGYKFDSGPSLFSGLQ 112
>ZFIN|ZDB-GENE-061110-141 [details] [associations]
symbol:zgc:154169 "zgc:154169" species:7955 "Danio
rerio" [GO:0055114 "oxidation-reduction process" evidence=IBA]
[GO:0051786 "all-trans-retinol 13,14-reductase activity"
evidence=IBA] [GO:0042572 "retinol metabolic process" evidence=IBA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IBA]
ZFIN:ZDB-GENE-061110-141 GO:GO:0005789 GO:GO:0042572 eggNOG:COG1233
GeneTree:ENSGT00390000017613 HOGENOM:HOG000233930
HOVERGEN:HBG079484 KO:K09516 OrthoDB:EOG4R23TN GO:GO:0051786
EMBL:BX936386 EMBL:BC125971 IPI:IPI00817843 RefSeq:NP_001071261.1
UniGene:Dr.104319 Ensembl:ENSDART00000102690 GeneID:777751
KEGG:dre:777751 InParanoid:A0JMQ8 OMA:KDTREPL NextBio:20924309
Uniprot:A0JMQ8
Length = 607
Score = 165 (63.1 bits), Expect = 8.3e-09, P = 8.3e-09
Identities = 125/543 (23%), Positives = 222/543 (40%)
Query: 2 AGHNGLVSAAYLARAGLSVAVLERRHVLGGAA--VTEEIIPGFQFSRASYLLSLLRPHI- 58
+G GL A LA+ G V VLE+ GG TE+ GF+F + + L H
Sbjct: 70 SGIGGLAIAVLLAKVGKKVLVLEQHDRAGGCCHTFTEQ---GFEFDVGIHYIGELLDHTP 126
Query: 59 YKDLELKKHGLKLLTRDPRSYTPL-SP-DKWT---NKAKSLTLGLDPQKNY-EQIARFSV 112
++ L + +T + PL +P DK K + + +K Y +++ +
Sbjct: 127 FRCL------IDQMTNGQLQWDPLENPFDKVVIGPPKNRRIYPIYSGRKRYMDELKKCFP 180
Query: 113 KDAQNFEKYDHHIEEITNLL--DPLFDIAPHDFGNLLMYNLFTRRGEMKDVYSLLTCSAF 170
+ + +K+ E++ + L +AP F L+ R + +S + S
Sbjct: 181 GEEKAIDKFVRLCEKVAPGIWFMVLLKLAPAPFAKFLVRTGLASR--LTSFFSYASRSLK 238
Query: 171 SILNDWFESEPLKATLLTDGLI-GAMVSPHSPSTSYVLLHHVMGGAEGVKGAWAYPEGGM 229
++N+ +++ L+A L L G + S S +L+ H M GA W YP+GG
Sbjct: 239 DVVNELTQNKDLRAVLSYIFLTYGNIPKEASFSMHSILVCHFMNGA------W-YPKGGA 291
Query: 230 GAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGV-VTNGLE---IKAKYVLSNTTA 285
++ + + +G + V I L+ K A GV V G E ++A V+S+
Sbjct: 292 SEIAYHMIPIIEKAGGAVLVRAPVNRILLNDAKEAIGVSVLKGQEEVHVRAPIVISDAGI 351
Query: 286 KCTLLDLIPKGNLDERTTQAVQSIDYASPVTKINVALKSIPNFLADPNPSENTVQPHHHG 345
T L+PK D +T A+Q ++ + + F+ N ++ ++
Sbjct: 352 FNTYEHLLPK---DVQTMPAIQK-----QLSMLKHGESGLSIFIG-LNGTKEELELKADN 402
Query: 346 SIHLNCEDMQQVFDAYQDATQGIPSTR-PMIEMVLPSSLDNTLSP--PGHHVCLLFTQFT 402
+ ++F+AY+ + + + P+I + PS+ D+T PG + T F
Sbjct: 403 FYVFPENNFDELFEAYRKGNREDSAKKLPVIFVASPSAKDSTWPEREPGKSTLSVVT-FA 461
Query: 403 PYKLAGDRDWTEEDKANYATNVFSSIEQ----YC-PGFTQ------DIVGY-EILTPPDL 450
Y+ +W ++ N +T+ + ++Q Y G T+ D + Y E TP
Sbjct: 462 KYEWF--EEWKDDKVKNRSTD-YKELKQMFINYILEGVTEIYPKIKDRIEYVEAGTPITN 518
Query: 451 EKEFGLTGGNIF---HGALSLNQLLFNRPLPIQGPSSPFTLIPH-LLLCG-SGAHPGGGV 505
+ G G ++ HG N L N L Q P + L+LCG +G G
Sbjct: 519 QFYIGSPKGEVYGADHGISRFNVEL-NATLRPQTPVKNLYITGQDLMLCGFAGGLSGALT 577
Query: 506 CGA 508
C +
Sbjct: 578 CAS 580
>UNIPROTKB|Q10AT7 [details] [associations]
symbol:Os03g0841900 "Os03g0841900 protein" species:39947
"Oryza sativa Japonica Group" [GO:0009507 "chloroplast"
evidence=ISS] [GO:0016117 "carotenoid biosynthetic process"
evidence=ISS] [GO:0046608 "carotenoid isomerase activity"
evidence=ISS] InterPro:IPR014101 GO:GO:0009507 EMBL:DP000009
EMBL:AP008209 GO:GO:0016117 EMBL:CM000140 eggNOG:COG1233
GO:GO:0046608 PANTHER:PTHR10668:SF30 RefSeq:NP_001051855.1
UniGene:Os.22483 STRING:Q10AT7 EnsemblPlants:LOC_Os03g62510.1
GeneID:4334739 KEGG:osa:4334739 OMA:PQCESFM ProtClustDB:CLSN2690470
Uniprot:Q10AT7
Length = 597
Score = 105 (42.0 bits), Expect = 1.3e-08, Sum P(3) = 1.3e-08
Identities = 44/160 (27%), Positives = 72/160 (45%)
Query: 363 DATQGIPSTRPMIEMVLPSSLDNTLSPPGHHVCLLFTQFT-PYKL-AG-DRDWTEED--K 417
D +G+ + + ++ + +P+ L N L+PPG HV +T T P+ L G DR E K
Sbjct: 429 DWNKGVDADQNVVLISVPTVLGNGLAPPGKHVLHAYTPGTEPFSLWEGLDRKSAEYRRLK 488
Query: 418 ANYATNVFSSIEQYC-PGFTQDIVGYEILTPPDLEKEFGLTGGNIFHGALSLNQLLFNRP 476
+ ++ ++E P F+++ +++ P K F + A+ + F
Sbjct: 489 EERSEVMWKAVELALGPRFSREKCDVKLVGSPLTHKRFLRRNRGTYGPAIKAGEATF--- 545
Query: 477 LPIQGPSSPFTLIPHLLLCGSGAHPGGGV--CGAPGYIAA 514
P G ++P IP L CG PG GV A G I A
Sbjct: 546 -P--GQATP---IPQLFCCGDSTFPGIGVPAVAASGAIVA 579
Score = 83 (34.3 bits), Expect = 1.3e-08, Sum P(3) = 1.3e-08
Identities = 27/73 (36%), Positives = 41/73 (56%)
Query: 224 YPEGGMGAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGV-VTNGLEIKA-KYVLS 281
YP G GA+ AL R + G +L V +I +++ RA GV + +G ++A K V+S
Sbjct: 313 YPLEGSGAIIDALVRGIKKFGGRLALRSHVEKILIENG-RAVGVKLQSGQIVRARKAVVS 371
Query: 282 NTTAKCTLLDLIP 294
N + TL DL+P
Sbjct: 372 NASMWDTL-DLLP 383
Score = 65 (27.9 bits), Expect = 1.3e-08, Sum P(3) = 1.3e-08
Identities = 21/51 (41%), Positives = 24/51 (47%)
Query: 2 AGHNGLVSAAYLARAGLSVAVLERRHVLGGAAVTEEIIPGFQFSRASYLLS 52
+G GL A LAR V VLE GGAA + +I GF F L S
Sbjct: 83 SGIGGLCCAGLLARYNQDVLVLESHDRPGGAAHSFDI-KGFNFDSGPSLFS 132
>UNIPROTKB|Q0IS25 [details] [associations]
symbol:Os11g0572700 "Os11g0572700 protein" species:39947
"Oryza sativa Japonica Group" [GO:0009507 "chloroplast"
evidence=ISS] [GO:0016117 "carotenoid biosynthetic process"
evidence=ISS] [GO:0046608 "carotenoid isomerase activity"
evidence=ISS] InterPro:IPR014101 GO:GO:0009507 EMBL:AP008217
GO:GO:0016117 KO:K09835 ProtClustDB:CLSN2680687 GO:GO:0046608
PANTHER:PTHR10668:SF30 RefSeq:NP_001068127.1 UniGene:Os.69031
STRING:Q0IS25 PRIDE:Q0IS25 GeneID:4350758 KEGG:osa:4350758
Gramene:Q0IS25 Uniprot:Q0IS25
Length = 602
Score = 106 (42.4 bits), Expect = 3.2e-08, Sum P(3) = 3.2e-08
Identities = 32/106 (30%), Positives = 52/106 (49%)
Query: 220 GAWAYPEGGMGAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGV-VTNGLEIKAKY 278
G YP GG+G ++ +LA G+++ VT + L++ K A GV ++NG E AK
Sbjct: 303 GGINYPVGGVGGIAMSLADGLVDKGSEIRYKANVTNVILENGK-AVGVRLSNGKEFFAKT 361
Query: 279 VLSNTTAKCTLLDLIPKGNLDERTTQAVQSIDYASPVTKINVALKS 324
V+SN T T L+ L E ++ A I++ +K+
Sbjct: 362 VISNATRWDTFGKLLKVEELPEEEKNFQKNYVKAPSFLSIHMGVKA 407
Score = 86 (35.3 bits), Expect = 3.2e-08, Sum P(3) = 3.2e-08
Identities = 34/134 (25%), Positives = 56/134 (41%)
Query: 375 IEMVLPSSLDNTLSPPGHHVCLLFTQ--FTPYKLAGDRDWTEEDKANYATNVFSSIEQYC 432
I + +P+ LD +L+P GHH+ +FT ++ +D+ E+ K AT + +E+
Sbjct: 435 IFLSIPTVLDPSLAPEGHHILHIFTTAGIEDWEGLSRKDY-EKKKELVATEIIKRLEKKL 493
Query: 433 -PGFTQDIVGYEILTPPDLEKEFGLTGGNIFHGALSLNQLLFNRPLPIQGPSSPFTLIPH 491
PG IV E+ +P + G +G + +P + T I
Sbjct: 494 FPGLQDSIVLKEVGSPKTHRRFLARNDGT--YGPMPRG-----KPKGLLAMPFNTTSIDG 546
Query: 492 LLLCGSGAHPGGGV 505
L G PG GV
Sbjct: 547 LYCVGDSCFPGQGV 560
Score = 57 (25.1 bits), Expect = 3.2e-08, Sum P(3) = 3.2e-08
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 2 AGHNGLVSAAYLARAGLSVAVLERRHVLGGAA 33
+G G+V+A LA G V VLE+ + GG++
Sbjct: 131 SGIGGMVAATQLAAKGARVLVLEKYVIPGGSS 162
>UNIPROTKB|A8J3K3 [details] [associations]
symbol:CHLREDRAFT_130438 "Predicted protein" species:3055
"Chlamydomonas reinhardtii" [GO:0009507 "chloroplast" evidence=ISS]
[GO:0016117 "carotenoid biosynthetic process" evidence=ISS]
[GO:0046608 "carotenoid isomerase activity" evidence=ISS]
InterPro:IPR014101 GO:GO:0009507 GO:GO:0016117 eggNOG:COG1233
GO:GO:0046608 PANTHER:PTHR10668:SF30 EMBL:DS496135
RefSeq:XP_001695939.1 UniGene:Cre.3256 ProteinModelPortal:A8J3K3
ProMEX:A8J3K3 EnsemblPlants:EDP01276 GeneID:5721453
KEGG:cre:CHLREDRAFT_130438 OMA:ANEPWER ProtClustDB:CLSN2922292
Uniprot:A8J3K3
Length = 558
Score = 101 (40.6 bits), Expect = 4.3e-08, Sum P(3) = 4.3e-08
Identities = 31/80 (38%), Positives = 42/80 (52%)
Query: 224 YPEGGMGAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGV-VTNGLEIKA-KYVLS 281
+P GG A+ Q L + G +L S V +I LD +ASGV + G IKA K V+S
Sbjct: 275 FPVGGSQAMVQGLVGGMEKYGGRLMLSSHVDKILLDDKGKASGVALRGGGTIKARKAVIS 334
Query: 282 NTTAKCTLLDLIPKGNLDER 301
N + TL L+P L E+
Sbjct: 335 NASVWDTL-KLVPADRLPEQ 353
Score = 79 (32.9 bits), Expect = 4.3e-08, Sum P(3) = 4.3e-08
Identities = 40/155 (25%), Positives = 69/155 (44%)
Query: 367 GIPSTRPMIEMVLPSSLDNTLSPPGHHVCLLFTQFT-PYKL-AG-DRDWTEEDKANYATN 423
G+ + ++ + +PS D +++P G H + T PY++ G DR E K +
Sbjct: 396 GVDQPQNVVLISIPSVKDPSMAPAGKHCLHAYLPATEPYEIWKGLDRRSLEYAKLKEERS 455
Query: 424 --VFSSIEQYCPGFTQDIVGYEILTPPDLEKEFGLTGGNIFHGALSLNQLLFNRPLPIQG 481
+++ +E+ P + + TP E+ G+ + A+ + LF P G
Sbjct: 456 QVLWAGVEKVIPDIRKRAELSSVGTPLTHERFLRRHRGS-YGPAIQAGKALF----P--G 508
Query: 482 PSSPFTLIPHLLLCGSGAHPGGGV--CGAPGYIAA 514
P++P IP L + G PG G+ A G IAA
Sbjct: 509 PTTP---IPGLYMTGDSTFPGIGLPAVAASGTIAA 540
Score = 67 (28.6 bits), Expect = 4.3e-08, Sum P(3) = 4.3e-08
Identities = 19/51 (37%), Positives = 24/51 (47%)
Query: 2 AGHNGLVSAAYLARAGLSVAVLERRHVLGGAAVTEEIIPGFQFSRASYLLS 52
+G GL A LA+ G V V E ++ GGAA E G+ F L S
Sbjct: 53 SGIGGLCCAGLLAKYGYKVTVCESHYIAGGAAHAWER-DGYHFESGPSLYS 102
>UNIPROTKB|P54979 [details] [associations]
symbol:carA2 "zeta-carotene-forming phytoene desaturase"
species:34 "Myxococcus xanthus" [GO:0016117 "carotenoid
biosynthetic process" evidence=IDA] [GO:0016627 "oxidoreductase
activity, acting on the CH-CH group of donors" evidence=IDA]
[GO:0055114 "oxidation-reduction process" evidence=IDA]
UniPathway:UPA00803 InterPro:IPR002937 InterPro:IPR014105
Pfam:PF01593 InterPro:IPR008150 GO:GO:0016117 GO:GO:0015979
GO:GO:0015995 GO:GO:0016627 PANTHER:PTHR10668:SF3
TIGRFAMs:TIGR02734 PROSITE:PS00982 EMBL:Z21955 PIR:S32169
ProteinModelPortal:P54979 BioCyc:MetaCyc:MONOMER-16379
Uniprot:P54979
Length = 517
Score = 101 (40.6 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 36/115 (31%), Positives = 56/115 (48%)
Query: 170 FSILNDWFESEPLKATLLTDGL-IGAMVSPHSPSTSYVLLHHVMGGAEGVKGAWAYPEGG 228
++ ++ +F+ E L+A + + +G VSP++ Y LL G G W +P+GG
Sbjct: 175 YADVSRFFQDERLRAAMTFQTMYLG--VSPYASPAVYGLLPFTELGV----GIW-FPKGG 227
Query: 229 MGAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVVTNGLEI-KAKYVLSN 282
+ A+ QAL R A+ G + V I D R GV G E+ +A VL N
Sbjct: 228 LYAIPQALERLAREEGVRFHYGAPVERILTDGG-RTRGVRLEGGEVVEADAVLCN 281
Score = 79 (32.9 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 42/151 (27%), Positives = 60/151 (39%)
Query: 373 PMIEMVLPSSLDNTLSPPGHHVCLLFTQFTPYKLAGDRDWTEEDKANYATNVFSSIEQYC 432
P + P+ D +L+P G + P++ D DW E A E
Sbjct: 352 PSFYVNAPTRTDASLAPEGKDALYVLVP-VPHQHP-DLDWKVEGPKVRAKFFARMAELGF 409
Query: 433 PGFTQDI-VGYEILTPPDLEKEFGLTGGNIFHGALSLNQLLFNRPLPIQGPSSPFTLIPH 491
P DI V TP D F L G+ F LS N F + P + PS+ + +
Sbjct: 410 PSLESDIEVERRSSTPDDWAGTFNLARGSGF--GLSQN---FTQIGPFR-PSNQDARVKN 463
Query: 492 LLLCGSGAHPGGGVCGAPGYIAAQMVN-RLM 521
L G+ PG G+ I+A++V RLM
Sbjct: 464 LFFVGASTQPGTGLPTV--LISARLVTERLM 492
Score = 61 (26.5 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 18/60 (30%), Positives = 29/60 (48%)
Query: 2 AGHNGLVSAAYLARAGLSVAVLERRHVLGGAAVTEEIIPGFQFSRASYLLSLLRPHIYKD 61
AG GL +AA LA G V V E+ GG ++ GF + ++ L P ++++
Sbjct: 15 AGVGGLAAAARLAHQGFDVQVFEKTQGPGGRCNRLQV-DGFTWDLGPTIV--LMPEVFEE 71
>MGI|MGI:1914692 [details] [associations]
symbol:Retsat "retinol saturase (all trans retinol 13,14
reductase)" species:10090 "Mus musculus" [GO:0005640 "nuclear outer
membrane" evidence=IDA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IDA] [GO:0016020 "membrane" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] [GO:0042572 "retinol metabolic process"
evidence=IDA] [GO:0051786 "all-trans-retinol 13,14-reductase
activity" evidence=IDA] [GO:0055114 "oxidation-reduction process"
evidence=IDA] MGI:MGI:1914692 GO:GO:0005789 GO:GO:0042572
EMBL:CH466523 GO:GO:0005640 eggNOG:COG1233 CTD:54884
GeneTree:ENSGT00390000017613 HOGENOM:HOG000233930
HOVERGEN:HBG079484 KO:K09516 OrthoDB:EOG4R23TN GO:GO:0051786
EMBL:AF466400 EMBL:AY704159 EMBL:EF620363 EMBL:EF620364
EMBL:EF620365 EMBL:EF620366 EMBL:AK002851 EMBL:AK144115
EMBL:AC125039 EMBL:BC011203 EMBL:BC117751 IPI:IPI00471380
RefSeq:NP_080435.3 UniGene:Mm.305108 ProteinModelPortal:Q64FW2
SMR:Q64FW2 STRING:Q64FW2 PhosphoSite:Q64FW2 PaxDb:Q64FW2
PRIDE:Q64FW2 Ensembl:ENSMUST00000070597 GeneID:67442 KEGG:mmu:67442
InParanoid:Q149J8 OMA:PSHTTFS BioCyc:MetaCyc:MONOMER-16797
BRENDA:1.3.99.23 NextBio:324578 Bgee:Q64FW2 Genevestigator:Q64FW2
GermOnline:ENSMUSG00000056666 Uniprot:Q64FW2
Length = 609
Score = 145 (56.1 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 111/477 (23%), Positives = 185/477 (38%)
Query: 2 AGHNGLVSAAYLARAGLSVAVLERRHVLGGAAVTEEIIPGFQFSRASYLLSLLRPHIYKD 61
+G GL SAA LA+AG V VLE+ GG T G +F + + +R +
Sbjct: 74 SGIGGLASAAVLAKAGKRVLVLEQHTKAGGCCHTFGE-NGLEFDTGIHYIGRMR-----E 127
Query: 62 LELKKHGLKLLTRDPRSYTPL-SP-D----KWTNKAKSLTLGLDPQKNYEQ-IARFSVKD 114
+ + L +T + P+ SP D + N K + +K Y Q + + K+
Sbjct: 128 GNIGRFILDQITEGQLDWAPMASPFDLMILEGPNGRKEFPM-YSGRKEYIQGLKKKFPKE 186
Query: 115 AQNFEKYDHHIEEITNLLDP--LFDIAPHDFGNLLM-YNLFTRRGEMKDVYSLLTCSAFS 171
+KY ++ + + L P LL + L TR T S
Sbjct: 187 EAVIDKYMELVKVVARGVSHAVLLKFLPLPLTQLLSKFGLLTR---FSPFCRASTQSLAE 243
Query: 172 ILNDWFESEPLKATLLTDGLIGAMVSPHSPSTSYVLLHHVMGGAEGVKGAWAYPEGGMGA 231
+L S L+A L I +PS + LH ++ ++GA+ YP GG
Sbjct: 244 VLQQLGASRELQAVL---SYIFPTYGV-TPSHTAFSLHALLVD-HYIQGAY-YPRGGSSE 297
Query: 232 VSQALARSAQASGAQLFTSQTVTEITLDSDKRASGV-VTNGLEIKAKY---VLSNTTAKC 287
++ Q +G + T TV + LDS RA GV V G E+ Y V+SN
Sbjct: 298 IAFHTIPLIQRAGGAVLTRATVQSVLLDSAGRACGVSVKKGQELVNIYCPVVISNAGMFN 357
Query: 288 TLLDLIPKGNLDERTTQAVQSIDYASPVTKINVALKSIPNFLADPNPSENTVQPHHHGSI 347
T L+P+ T + + + + + +++ SI F+ E+ + +
Sbjct: 358 TYQHLLPE------TVRHLPDVKKQLAMVRPGLSMLSI--FICLKGTKEDLKLQSTNYYV 409
Query: 348 HLNCEDMQQVFDAYQDAT-QGIPSTRPMIEMVLPSSLDNTLSP--PGHHVCLLFTQFTPY 404
+ + DM + + Y + P P++ + PSS D T P T P
Sbjct: 410 YFDT-DMDKAMERYVSMPKEKAPEHIPLLFIAFPSSKDPTWEERFPDRST---MTALVPM 465
Query: 405 KLAGDRDWTEEDKANYATNVFSSIEQYCPGFTQDIVGYEILTPPDLE-KEFGLTGGN 460
+W EE K + + +++ F + + + P LE K +TGG+
Sbjct: 466 AFEWFEEWQEEPKGKRGVD-YETLKN---AFVEASMSVIMKLFPQLEGKVESVTGGS 518
>UNIPROTKB|Q6NUM9 [details] [associations]
symbol:RETSAT "All-trans-retinol 13,14-reductase"
species:9606 "Homo sapiens" [GO:0005789 "endoplasmic reticulum
membrane" evidence=ISS;IBA] [GO:0042572 "retinol metabolic process"
evidence=ISS;IBA] [GO:0051786 "all-trans-retinol 13,14-reductase
activity" evidence=ISS;IBA] [GO:0016491 "oxidoreductase activity"
evidence=ISS] [GO:0055114 "oxidation-reduction process"
evidence=ISS] [GO:0031965 "nuclear membrane" evidence=ISS]
[GO:0005640 "nuclear outer membrane" evidence=ISS] GO:GO:0005789
GO:GO:0042572 GO:GO:0005640 DrugBank:DB00162 EMBL:AC062037
eggNOG:COG1233 CTD:54884 HOVERGEN:HBG079484 KO:K09516
OrthoDB:EOG4R23TN GO:GO:0051786 EMBL:AY358568 EMBL:AK075261
EMBL:AC093162 EMBL:BC068517 EMBL:BC011418 EMBL:AK000303
IPI:IPI00296157 IPI:IPI00335161 RefSeq:NP_060220.3
UniGene:Hs.440401 ProteinModelPortal:Q6NUM9 SMR:Q6NUM9
STRING:Q6NUM9 PhosphoSite:Q6NUM9 DMDM:90108452 PaxDb:Q6NUM9
PRIDE:Q6NUM9 DNASU:54884 Ensembl:ENST00000263854
Ensembl:ENST00000295802 GeneID:54884 KEGG:hsa:54884 UCSC:uc002spd.3
GeneCards:GC02M085569 HGNC:HGNC:25991 HPA:HPA007961
neXtProt:NX_Q6NUM9 PharmGKB:PA145007867 InParanoid:Q6NUM9
OMA:VQLLDRC PhylomeDB:Q6NUM9 GenomeRNAi:54884 NextBio:57859
ArrayExpress:Q6NUM9 Bgee:Q6NUM9 CleanEx:HS_RETSAT
Genevestigator:Q6NUM9 GermOnline:ENSG00000042445 Uniprot:Q6NUM9
Length = 610
Score = 145 (56.1 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 115/480 (23%), Positives = 188/480 (39%)
Query: 2 AGHNGLVSAAYLARAGLSVAVLERRHVLGGAAVTEEIIPGFQFSRASYLLSLLRPHIYKD 61
+G GL +AA LA+AG V VLE+ GG T G +F + + + ++
Sbjct: 75 SGFGGLAAAAILAKAGKRVLVLEQHTKAGGCCHTFGK-NGLEFDTGIHYIGRM-----EE 128
Query: 62 LELKKHGLKLLTRDPRSYTPLSPDKWTNKAKSLTL-GLDPQKNYEQIA--RFSVKDA-QN 117
+ + L +T + PLS + + L G + +K Y + + ++ +
Sbjct: 129 GSIGRFILDQITEGQLDWAPLS-----SPFDIMVLEGPNGRKEYPMYSGEKAYIQGLKEK 183
Query: 118 FEKYDHHIEEITNLLDPLFDIAPH----DFGNLLMYNLFTRRGEMKDVYSLLTCSAFS-- 171
F + + I++ L+ + APH F L + L R G + L S S
Sbjct: 184 FPQEEAIIDKYIKLVKVVSSGAPHAILLKFLPLPVVQLLDRCGLLTRFSPFLQASTQSLA 243
Query: 172 -ILNDWFESEPLKATLLTDGLIGAMVSPHSPSTSYVLL-HHVMGGAEGVKGAWAYPEGGM 229
+L S L+A L + HS + + LL +H M KG + YP GG
Sbjct: 244 EVLQQLGASSELQAVLSYIFPTYGVTPNHSAFSMHALLVNHYM------KGGF-YPRGGS 296
Query: 230 GAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGV-VTNGLEIKAKY---VLSNTTA 285
++ Q +G + T TV + LDS +A GV V G E+ Y V+SN
Sbjct: 297 SEIAFHTIPVIQRAGGAVLTKATVQSVLLDSAGKACGVSVKKGHELVNIYCPIVVSNAGL 356
Query: 286 KCTLLDLIPKGNLDERTTQAV-QSIDYASPVTKINVALKSIPNFLADPNPSENTVQPHHH 344
T L+P GN R V Q + P + + S+ F+ E+ P +
Sbjct: 357 FNTYEHLLP-GNA--RCLPGVKQQLGTVRP----GLGMTSV--FICLRGTKEDLHLPSTN 407
Query: 345 GSIHLNCEDMQQVFDAYQDATQGIPSTR-PMIEMVLPSSLDNTLSP--PGHHVCLLFTQF 401
++ + DM Q + Y + + P++ PS+ D T PG ++
Sbjct: 408 YYVYYDT-DMDQAMERYVSMPREEAAEHIPLLFFAFPSAKDPTWEDRFPGRSTMIMLIP- 465
Query: 402 TPYKLAGDRDWTEEDKANYATNVFSSIEQYCPGFTQDIVGYEILTPPDLE-KEFGLTGGN 460
T Y +W EE +A S E + F + + + P LE K +T G+
Sbjct: 466 TAY------EWFEEWQAELKGKRGSDYETFKNSFVEASMSVVLKLFPQLEGKVESVTAGS 519
>ZFIN|ZDB-GENE-050320-11 [details] [associations]
symbol:retsat "retinol saturase (all-trans-retinol
13,14-reductase)" species:7955 "Danio rerio" [GO:0042572 "retinol
metabolic process" evidence=IBA] [GO:0005789 "endoplasmic reticulum
membrane" evidence=IBA] [GO:0051786 "all-trans-retinol
13,14-reductase activity" evidence=IEA;IDA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] ZFIN:ZDB-GENE-050320-11 GO:GO:0005789 GO:GO:0042572
eggNOG:COG1233 EMBL:BC078372 EMBL:BC090469 IPI:IPI00495382
RefSeq:NP_001015061.1 UniGene:Dr.80063 ProteinModelPortal:Q5BLE8
STRING:Q5BLE8 Ensembl:ENSDART00000013167 GeneID:325922
KEGG:dre:325922 CTD:54884 GeneTree:ENSGT00390000017613
HOGENOM:HOG000233930 HOVERGEN:HBG079484 InParanoid:Q5BLE8 KO:K09516
OMA:IHYIGEM OrthoDB:EOG4R23TN NextBio:20809552 Bgee:Q5BLE8
GO:GO:0051786 Uniprot:Q5BLE8
Length = 607
Score = 144 (55.7 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 120/545 (22%), Positives = 209/545 (38%)
Query: 2 AGHNGLVSAAYLARAGLSVAVLERRHVLGGAAVTEEIIPGFQFSRASYLLSLLRPHIYKD 61
+G GL A LA+ G V VLE+ GG T + GF+F + + L H K
Sbjct: 70 SGIGGLAIAVLLAKVGKKVLVLEQHDRAGGCCHTFKE-QGFEFDVGIHYIGELSNH--KP 126
Query: 62 LELKKHGLKLLTRDPRSYTPLSPDKWTNKAKSLTLGLDPQKNYEQI----ARFSVKDAQN 117
L + +T + PL N ++ +G + QI R+ + +
Sbjct: 127 LRCI---IDQMTNGQLQWDPLE-----NPFDNVVIGPPENRRIYQIYSGRKRYMDELKKC 178
Query: 118 FEKYDHHIEEITNLLDP---------LFDIAPHDFGNLLMYNLFTRRGEMKDVYSLLTCS 168
F + I+E L L P N L+ R Y+ + S
Sbjct: 179 FPGEEKAIDEYVRLCKEVGQGVWVMVLLKFLPTPIANFLVRTGLANRLTSFSRYA--SRS 236
Query: 169 AFSILNDWFESEPLKATL-LTDGLIGAMVSPHSPSTSYVLLHHVMGGAEGVKGAWAYPEG 227
++N+ +++ L+A L G G + S S ++++H M GA W YP+G
Sbjct: 237 LTDVVNELTQNKDLRAVLSYIFGTYGKIPKEASFSMHSLIVNHYMNGA------W-YPKG 289
Query: 228 GMGAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGV-VTNGLE---IKAKYVLSNT 283
G ++ + + +G + V I L+ K A GV V G E ++A V+S+
Sbjct: 290 GATEIAYHMIPIIEKAGGAVLVRAPVNRILLNDAKEAIGVSVLKGQEEVHVRAPIVISDA 349
Query: 284 TAKCTLLDLIPKGNLDERTTQAVQSIDYASPVTKINVALKSIPNFLA-DPNPSENTVQPH 342
T L+PK D +T A+Q ++ + + F+ D E ++
Sbjct: 350 GIFNTYEYLLPK---DVQTMPAIQK-----QLSMLQHGDSGLSIFIGLDGTKEELGLKAD 401
Query: 343 HHGSIHLNCEDMQQVFDAYQDATQGIPSTR-PMIEMVLPSSLDNTLSP--PGHHVCLLFT 399
++ N ++ ++ + Y+ + + + P+I + PS+ D+T PG L
Sbjct: 402 NYFIYPEN--NIDELLEDYRSGNREESAKKNPLIFVASPSAKDSTWPERTPGKST-LTVV 458
Query: 400 QFTPYKLAGDRDWTEEDKANYATN-----------VFSSIEQYCPGFTQDIVGYEILTPP 448
F Y+ +W ++ N +T+ + ++ + P I + TP
Sbjct: 459 SFANYEWF--EEWKDDKVKNRSTDYKQLKELFINYILEAVTEIYPKIKDRIEYVDAGTPI 516
Query: 449 DLEKEFGLTGGNIF---HGALSLNQLLFNRPLPIQGPSSPFTLIPH-LLLCG-SGAHPGG 503
+ G I+ HG + L N + Q P L L+LCG +GA G
Sbjct: 517 TNQHYIAAPRGEIYGADHGIPRFSAEL-NATIRAQTPIKNLYLTGQDLMLCGFAGALTGA 575
Query: 504 GVCGA 508
CG+
Sbjct: 576 LTCGS 580
>TAIR|locus:2033055 [details] [associations]
symbol:CRTISO "carotenoid isomerase" species:3702
"Arabidopsis thaliana" [GO:0009055 "electron carrier activity"
evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IBA;TAS]
[GO:0016117 "carotenoid biosynthetic process" evidence=IEA;IGI;TAS]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0016853
"isomerase activity" evidence=IEA] [GO:0055114 "oxidation-reduction
process" evidence=IEA] [GO:0009662 "etioplast organization"
evidence=IMP] [GO:0046608 "carotenoid isomerase activity"
evidence=IGI;IMP] UniPathway:UPA00803 InterPro:IPR014101
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009507 GO:GO:0031969
GO:GO:0016117 EMBL:AC011001 EMBL:BX813870 IPI:IPI00534972
PIR:A86203 RefSeq:NP_172167.2 UniGene:At.47600 UniGene:At.51507
UniGene:At.67219 ProteinModelPortal:Q9M9Y8 SMR:Q9M9Y8 STRING:Q9M9Y8
PaxDb:Q9M9Y8 PRIDE:Q9M9Y8 EnsemblPlants:AT1G06820.1 GeneID:837193
KEGG:ath:AT1G06820 TAIR:At1g06820 eggNOG:COG1233
HOGENOM:HOG000150223 InParanoid:Q9M9Y8 KO:K09835 OMA:AVGRKME
PhylomeDB:Q9M9Y8 ProtClustDB:CLSN2680687
BioCyc:ARA:AT1G06820-MONOMER BioCyc:MetaCyc:AT1G06820-MONOMER
Genevestigator:Q9M9Y8 GermOnline:AT1G06820 GO:GO:0046608
GO:GO:0009662 PANTHER:PTHR10668:SF30 TIGRFAMs:TIGR02730
Uniprot:Q9M9Y8
Length = 595
Score = 100 (40.3 bits), Expect = 3.4e-06, Sum P(3) = 3.4e-06
Identities = 32/107 (29%), Positives = 53/107 (49%)
Query: 220 GAWAYPEGGMGAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGV-VTNGLEIKAKY 278
G YP GG+G ++++LA G+++ V I LD K A GV + +G E AK
Sbjct: 296 GGINYPVGGVGGIAKSLAEGLVDQGSEIQYKANVKSIILDHGK-AVGVRLADGREFFAKT 354
Query: 279 VLSNTTAKCTLLDLIPKGNLDERTTQAVQSIDYASP-VTKINVALKS 324
++SN T T L+ KG + + Q + +P I++ +K+
Sbjct: 355 IISNATRWDTFGKLL-KGEKLPKEEENFQKVYVKAPSFLSIHMGVKA 400
Score = 79 (32.9 bits), Expect = 3.4e-06, Sum P(3) = 3.4e-06
Identities = 33/134 (24%), Positives = 55/134 (41%)
Query: 375 IEMVLPSSLDNTLSPPGHHVCLLFTQFTPYKLAG--DRDWTEEDKANYATNVFSSIEQYC 432
I + +P+ LD++L+P G H+ +FT + G +++ E K + A + +E+
Sbjct: 428 IFLSIPTILDSSLAPDGRHILHIFTTSSIEDWEGLPPKEY-EAKKEDVAARIIQRLEKKL 486
Query: 433 -PGFTQDIVGYEILTPPDLEKEFGLTGGNIFHGALSLNQLLFNRPLPIQGPSSPFTLIPH 491
PG + I E+ TP + G +G + P + G T I
Sbjct: 487 FPGLSSSITFKEVGTPRTHRRFLARDKGT--YGPMPRGT-----PKGLLGMPFNTTAIDG 539
Query: 492 LLLCGSGAHPGGGV 505
L G PG GV
Sbjct: 540 LYCVGDSCFPGQGV 553
Score = 50 (22.7 bits), Expect = 3.4e-06, Sum P(3) = 3.4e-06
Identities = 17/50 (34%), Positives = 26/50 (52%)
Query: 2 AGHNGLVSAAYLARAGLSVAVLERRHVLGGAAVTEEIIPGFQFSRASYLL 51
+G GLV+A LA V VLE+ + GG++ E G+ F S ++
Sbjct: 85 SGIGGLVAATQLAVKEARVLVLEKYLIPGGSSGFYER-DGYTFDVGSSVM 133
>UNIPROTKB|P17054 [details] [associations]
symbol:crtI "Phytoene desaturase (neurosporene-forming)"
species:272942 "Rhodobacter capsulatus SB 1003" [GO:0016120
"carotene biosynthetic process" evidence=IDA] [GO:0016627
"oxidoreductase activity, acting on the CH-CH group of donors"
evidence=IDA] [GO:0071949 "FAD binding" evidence=IDA]
InterPro:IPR002937 InterPro:IPR014105 Pfam:PF01593
InterPro:IPR008150 GO:GO:0071949 GO:GO:0016117 GO:GO:0015979
EMBL:CP001312 GO:GO:0015995 GO:GO:0016627 PANTHER:PTHR10668:SF3
TIGRFAMs:TIGR02734 PROSITE:PS00982 GO:GO:0016120 EMBL:X52291
EMBL:Z11165 EMBL:J04969 PIR:A32617 RefSeq:YP_003576851.1
ProteinModelPortal:P17054 GeneID:9003508 KEGG:rcp:RCAP_rcc00679
PATRIC:35501426 HOGENOM:HOG000278176 KO:K10027 OMA:GPRYRES
ProtClustDB:CLSK940830 BioCyc:MetaCyc:MONOMER-14931
BioCyc:RCAP272942:GJIY-692-MONOMER Uniprot:P17054
Length = 524
Score = 97 (39.2 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 72/303 (23%), Positives = 129/303 (42%)
Query: 2 AGHNGLVSAAYLARAGLSVAVLERRHVLGG--AAVTEEIIPGFQFSRASYLLSL---LRP 56
AG GL +A L G V V++R GG +++T+ G +F ++++ LR
Sbjct: 16 AGLGGLAAAMRLGAKGYKVTVVDRLDRPGGRGSSITKG---GHRFDLGPTIVTVPDRLR- 71
Query: 57 HIYKDL--ELKKHGLKLLTRDPRSYTPLSPDKWTNKAKSLTLGLDPQKNYEQIARFSVKD 114
++ D + K + L+ +P YT PD K G D K ++AR S D
Sbjct: 72 ELWADCGRDFDKD-VSLVPMEP-FYTIDFPDG----EKYTAYG-DDAKVKAEVARISPGD 124
Query: 115 AQNFEKYDHHIEEITNLLDPLFDIAPHDFGNLLMYNLFTRRGEMKDVYSLLTC--SAFSI 172
+ F H + + ++ + G M L+ ++ + L S +
Sbjct: 125 VEGFR---HFMWDAK----ARYEFGYENLGRKPMSKLWDLI-KVLPTFGWLRADRSVYGH 176
Query: 173 LNDWFESEPLKATLLTDGL-IGAMVSPHSPSTSYVLLHHVMGGAEGVKGAWAYPEGGMGA 231
+ + L+ L L IG P ++ Y+L+ + E G Y GG+ A
Sbjct: 177 AKKMVKDDHLRFALSFHPLFIGG--DPFHVTSMYILVSQL----EKKFGVH-YAIGGVQA 229
Query: 232 VSQALARSAQASGAQLFTSQTVTEITLDSDKRASGV-VTNGLEIKAKYVLSNTTAKCTLL 290
++ A+A+ G ++ + V EI + D +A+G+ + +G E+ A+ V+SN A T
Sbjct: 230 IADAMAKVITDQGGEMRLNTEVDEILVSRDGKATGIRLMDGTELPAQVVVSNADAGHTYK 289
Query: 291 DLI 293
L+
Sbjct: 290 RLL 292
Score = 87 (35.7 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 37/141 (26%), Positives = 52/141 (36%)
Query: 380 PSSLDNTLSPPGHHVCLLFTQFTPYKLAGDRDWTEEDKANYATNVFSSIEQ-YCPGFTQD 438
PS D T +P G + + DW+ E + Y V IE+ PG +
Sbjct: 366 PSVTDPTAAPKGDDTFYVLSPVPNLGFDNGVDWSVEAE-KYKAKVLKVIEERLLPGVAEK 424
Query: 439 IVGYEILTPPDLEKEFGLTGGNIFHGALSLNQLLFNRPLPIQGPSSPFTLIPHLLLCGSG 498
I + TP + G F + Q + RP S + L L G+G
Sbjct: 425 ITEEVVFTPETFRDRYLSPLGAGFSLEPRILQSAWFRP---HNASEE---VDGLYLVGAG 478
Query: 499 AHPGGGVCGA--PGYIAAQMV 517
HPG GV G + AQM+
Sbjct: 479 THPGAGVPSVIGSGELVAQMI 499
>UNIPROTKB|Q67GI0 [details] [associations]
symbol:carB "Phytoene dehydrogenase" species:4850
"Blakeslea trispora" [GO:0016120 "carotene biosynthetic process"
evidence=IDA] [GO:0016166 "phytoene dehydrogenase activity"
evidence=IDA] InterPro:IPR002937 InterPro:IPR014105 Pfam:PF01593
InterPro:IPR008150 GO:GO:0016117 GO:GO:0015979 GO:GO:0015995
TIGRFAMs:TIGR02734 PROSITE:PS00982 GO:GO:0016120 EMBL:AY176663
GO:GO:0016166 ProteinModelPortal:Q67GI0 Uniprot:Q67GI0
Length = 582
Score = 137 (53.3 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 79/309 (25%), Positives = 129/309 (41%)
Query: 2 AGHNGLVSAAYLARAGLSVAVLERRHVLGGAAVTEEIIPGFQFSRAS--YLLSLLRPHIY 59
AG G +AA LAR G V V+E+ GG G +F + YL+ L +
Sbjct: 13 AGIGGTATAARLAREGFRVTVVEKNDFSGGRCSFIHH-DGHRFDQGPSLYLMPKLFEDAF 71
Query: 60 KDLELKKHGLKL-LTRDPRSYTPLSPDKWTNKAKSLTLGLDPQKNYEQIARFSVKDAQNF 118
DL+ ++ G L L R +Y D A L+ L K ++ R ++ F
Sbjct: 72 ADLD-ERIGDHLDLLRCDNNYKVHFDD---GDAVQLSSDLTKMKG--ELDR--IEGPLGF 123
Query: 119 EKY-DHHIEEITNLLDPLFDIAPHDFGNLLMYNLFTRRGEMKDVYSL-LTCSAFSILNDW 176
++ D E + F +F + ++L R + +++ L L + + +
Sbjct: 124 GRFLDFMKETHVHYEQGTFIAIKRNFETI--WDLI-RLQYVPEIFRLHLFGKIYDRASKY 180
Query: 177 FESEPLKATLLTDGLIGAMVSPHSPSTSYVLLHHVMGGAEGVKGAWAYPEGGMGAVSQAL 236
F+++ ++ + M SP+ Y LL + E +G W YP GG V Q L
Sbjct: 181 FQTKKMRMAFTFQTMYMGM-SPYDAPAVYSLLQYT----EFAEGIW-YPRGGFNMVVQKL 234
Query: 237 ARSAQAS-GAQLFTSQTVTEI-TLDSDKRASGV-VTNGLEIKAKYVLSNTTAKCTLLDLI 293
A GA+ V +I T+D DKR +GV + +G I+A V+ N L+
Sbjct: 235 ESIASKKYGAEFRYQSPVAKINTVDKDKRVTGVTLESGEVIEADAVVCNADLVYAYHHLL 294
Query: 294 PKGNLDERT 302
P N ++T
Sbjct: 295 PPCNWTKKT 303
>UNIPROTKB|Q64FG0 [details] [associations]
symbol:RETSAT "All-trans-retinol 13,14-reductase"
species:9541 "Macaca fascicularis" [GO:0005640 "nuclear outer
membrane" evidence=ISS] [GO:0005789 "endoplasmic reticulum
membrane" evidence=ISS] [GO:0016491 "oxidoreductase activity"
evidence=ISS] [GO:0031965 "nuclear membrane" evidence=ISS]
[GO:0042572 "retinol metabolic process" evidence=ISS] [GO:0051786
"all-trans-retinol 13,14-reductase activity" evidence=ISS]
[GO:0055114 "oxidation-reduction process" evidence=ISS]
GO:GO:0005789 GO:GO:0042572 GO:GO:0005640 HOVERGEN:HBG079484
GO:GO:0051786 EMBL:AY707524 ProteinModelPortal:Q64FG0
Uniprot:Q64FG0
Length = 610
Score = 111 (44.1 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 71/276 (25%), Positives = 113/276 (40%)
Query: 196 VSP-HSPSTSYVLL-HHVMGGAEGVKGAWAYPEGGMGAVSQALARSAQASGAQLFTSQTV 253
V+P HS + + LL +H + KGA+ YP GG ++ Q +G + T TV
Sbjct: 268 VTPRHSAFSMHALLVNHYL------KGAF-YPRGGSSEIAFHTIPVIQRAGGAVLTRATV 320
Query: 254 TEITLDSDKRASGV-VTNGLEIKAKY---VLSNTTAKCTLLDLIPKGNLDERTTQAV-QS 308
+ LDS +A GV V G E+ Y V+SN T L+P GN R V Q
Sbjct: 321 QSVLLDSAGKACGVSVKKGHELVNIYCPVVVSNAGLFNTYEHLLP-GNA--RCLPGVKQQ 377
Query: 309 IDYASPVTKINVALKSIPNFLADPNPSENTVQPHHHGSIHLNCEDMQQVFDAYQDATQGI 368
+ P + + S+ F+ E+ P + ++ + DM Q + Y +
Sbjct: 378 LGMVRP----GLGMMSV--FICLQGTKEDLHLPSTNYYVYHDT-DMDQAMERYVSMPREK 430
Query: 369 PSTR-PMIEMVLPSSLDNTLSP--PGHHVCLLFTQFTPYKLAGDRDWTEEDKANYATNVF 425
+ P++ + PS+ D T PG ++ + Y +W EE +A
Sbjct: 431 AAEHIPLLFIAFPSAKDPTWEDRFPGRSSMIMLIP-SAY------EWFEEWQAELKGKRG 483
Query: 426 SSIEQYCPGFTQDIVGYEILTPPDLE-KEFGLTGGN 460
S E Y F + + + P LE K +T G+
Sbjct: 484 SDYETYKNSFVEASMSVAMKLFPQLEGKVESVTAGS 519
Score = 71 (30.1 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 17/34 (50%), Positives = 21/34 (61%)
Query: 2 AGHNGLVSAAYLARAGLSVAVLERRHVLGGAAVT 35
+G GL +AA LA+AG V VLE+ GGA T
Sbjct: 75 SGFGGLAAAAILAKAGKRVLVLEQHTKAGGACHT 108
>RGD|628802 [details] [associations]
symbol:Retsat "retinol saturase (all trans retinol 13,14
reductase)" species:10116 "Rattus norvegicus" [GO:0005640 "nuclear
outer membrane" evidence=IEA;ISO;ISS] [GO:0005789 "endoplasmic
reticulum membrane" evidence=IEA;ISO;ISS;IBA] [GO:0016491
"oxidoreductase activity" evidence=ISO;ISS] [GO:0031965 "nuclear
membrane" evidence=ISO;ISS] [GO:0042572 "retinol metabolic process"
evidence=IEA;ISO;ISS;IBA] [GO:0051786 "all-trans-retinol
13,14-reductase activity" evidence=IEA;ISO;ISS;IBA] [GO:0055114
"oxidation-reduction process" evidence=ISO;ISS] RGD:628802
GO:GO:0005789 GO:GO:0042572 GO:GO:0005640 eggNOG:COG1233 CTD:54884
HOGENOM:HOG000233930 HOVERGEN:HBG079484 KO:K09516 OrthoDB:EOG4R23TN
GO:GO:0051786 EMBL:AF465614 IPI:IPI00206948 RefSeq:NP_659552.1
UniGene:Rn.55275 ProteinModelPortal:Q8VHE9 STRING:Q8VHE9
PRIDE:Q8VHE9 GeneID:246298 KEGG:rno:246298 UCSC:RGD:628802
InParanoid:Q8VHE9 NextBio:623694 Genevestigator:Q8VHE9
GermOnline:ENSRNOG00000014090 Uniprot:Q8VHE9
Length = 609
Score = 132 (51.5 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 111/478 (23%), Positives = 186/478 (38%)
Query: 2 AGHNGLVSAAYLARAGLSVAVLERRHVLGGAAVTEEIIPGFQFSRASYLLSLLRPHIYKD 61
+G GL SAA LA+AG V VLE+ GG T G +F + + +R +
Sbjct: 74 SGIGGLASAAVLAKAGKRVLVLEQHTKAGGCCHTFGE-NGLEFDTGIHYIGRMR-----E 127
Query: 62 LELKKHGLKLLTRDPRSYTPL-SP-D----KWTNKAKSLTLGLDPQKNYEQ-IARFSVKD 114
+ + L +T + P+ SP D + N K + +K Y Q + K+
Sbjct: 128 GNIGRFILDQITEGQLDWAPMASPFDLMILEGPNGRKEFPM-YSGRKEYIQGLKEKFPKE 186
Query: 115 AQNFEKYDHHIEEITNLLDP--LFDIAPHDFGNLL-MYNLFTRRGEMKDVYSLLTCSAFS 171
+KY ++ + + + L P LL + L TR T S
Sbjct: 187 EAVIDKYMELVKVVAHGVSHAILLKFLPLPLTQLLNKFGLLTR---FSPFCRASTQSLAE 243
Query: 172 ILNDWFESEPLKATLLTDGLIGAMVSPHSPSTSYVLLHHVMGGAEGVKGAWAYPEGGMGA 231
+L S L+A +L+ L V+P T++ L H + ++GA+ YP G
Sbjct: 244 VLKQLGASPELQA-VLSYILPTYGVTPSH--TTFSL--HALLVDHYIQGAY-YPRRGSSE 297
Query: 232 VSQALARSAQASGAQLFTSQTVTEITLDSDKRASGV-VTNGLEIKAKY---VLSNTTAKC 287
++ Q +G + T TV + LDS RA GV V G E+ Y V+SN
Sbjct: 298 IAFHTIPLIQRAGGAVLTRATVQSVLLDSAGRACGVSVKKGQELVNIYCPVVISNAGMFN 357
Query: 288 TLLDLIPKGNLDERTTQAVQSI-DYASPVTKINVALKSIPNFLADPNPSENTVQPHHHGS 346
T L+P ++V+ + D +T + L + F+ E +
Sbjct: 358 TYQHLLP---------ESVRYLPDVKKQLTMVKPGLSMLSIFICLKGTKEELKLQSTNYY 408
Query: 347 IHLNCEDMQQVFDAYQDAT-QGIPSTRPMIEMVLPSSLDNTLSP--PGHHVCLLFTQFTP 403
++ + DM + + Y + P P++ + PSS D T P T P
Sbjct: 409 VYFDT-DMDKAMECYVSMPKEKAPEHIPLLFIPFPSSKDPTWEDRFPDRST---MTVLVP 464
Query: 404 YKLAGDRDWTEEDKANYATNVFSSIEQYCPGFTQDIVGYEILTPPDLE-KEFGLTGGN 460
+W EE K + + +++ + ++ ++ P LE K +TGG+
Sbjct: 465 TAFEWFEEWQEEPKGKRGVD-YETLKNTFREASMSVI-MKLF--PQLEGKVESVTGGS 518
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.135 0.404 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 523 523 0.00090 119 3 11 22 0.41 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 25
No. of states in DFA: 618 (66 KB)
Total size of DFA: 298 KB (2154 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 47.01u 0.07s 47.08t Elapsed: 00:00:25
Total cpu time: 47.02u 0.07s 47.09t Elapsed: 00:00:27
Start: Thu Aug 15 13:44:32 2013 End: Thu Aug 15 13:44:59 2013