RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy893
(523 letters)
>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation
inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 297
Score = 112 bits (281), Expect = 2e-28
Identities = 39/293 (13%), Positives = 85/293 (29%), Gaps = 15/293 (5%)
Query: 2 AGHNGLVSAAYLARAGLSVAVLERRHVLGGAAVTEEIIPGFQFSRASYLLSLLRPHIY-- 59
G + + L+ G V ++++ GG A + + ++ + + + R +
Sbjct: 13 TGITECILSGLLSVDGKKVLHIDKQDHYGGEAASVTLSQLYEKFKQNPISKEERESKFGK 72
Query: 60 -KDLELKKHGLKLLTRDPRSYTPLSPDKWTNKAKSLTLGLDPQKNYEQIARFSVKDAQNF 118
+D + L+ + + D + +
Sbjct: 73 DRDWNVDLIPKFLMANGELTNILIHTDVTRYVD------FKQVSGSYVFKQGKIYKVPAN 126
Query: 119 EKYDHHIEEITNLLDPLFDIAPHDFGNLLMYNLFTRRGEMKDVYSLLTCSAFSILNDWFE 178
E + + +L T +G D ++ L + +
Sbjct: 127 EIEAISSPLMGIFEKRRMKKFLEWISSYKEDDLSTHQGLDLDKNTMDEVYYKFGLGNSTK 186
Query: 179 SEPLKATLLTDGLIGAMVSPHSPSTSYVLLHHVMGGAEGVKGAWAYPEGGMGAVSQALAR 238
+ + + + +L + A K + YP G+G + Q AR
Sbjct: 187 E--FIGHAMALWTNDDYLQQPARPSFERILLYCQSVARYGKSPYLYPMYGLGELPQGFAR 244
Query: 239 SAQASGAQLFTSQTVTEITLDSD-KRASGVVTNGLEIKAKYVLSNTTA---KC 287
+ G + E+ D + GV T KA V+++ T KC
Sbjct: 245 LSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKTKLGTFKAPLVIADPTYFPEKC 297
>d1d5ta1 c.3.1.3 (A:-2-291,A:389-431) Guanine nucleotide
dissociation inhibitor, GDI {Cow (Bos taurus) [TaxId:
9913]}
Length = 336
Score = 109 bits (271), Expect = 6e-27
Identities = 35/283 (12%), Positives = 82/283 (28%), Gaps = 9/283 (3%)
Query: 2 AGHNGLVSAAYLARAGLSVAVLERRHVLGGAAVTEEIIPGFQFSRASYLLSLLRPHIYKD 61
G + + ++ G V ++R GG + + + +D
Sbjct: 14 TGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLEGPPETMGRGRD 73
Query: 62 LELKKHGLKLLTRDPRSYTPLSPDKWTNKAKSLTLGLDPQKNYEQIARFSVKDAQNFEKY 121
+ K L + + L + T + +I + + +
Sbjct: 74 WNV-DLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIYKVPSTETEALASN 132
Query: 122 DHHIEEITNLLDPLFDIAPHDFGNLLMYNLFTRRGEMKDVYSLLTCSAFSILNDWFESEP 181
+ E L +A D + + + +
Sbjct: 133 LMGMFEKRRFRKFLVFVANFDENDPKTFEGVDPQNTSMRDVY------RKFDLGQDVIDF 186
Query: 182 LKATLLTDGLIGAMVSPHSPSTSYVLLHHVMGGAEGVKGAWAYPEGGMGAVSQALARSAQ 241
L + P + + + L+ G K + YP G+G + Q AR +
Sbjct: 187 TGHALALYRTDDYLDQPCLETINRIKLYSESLARYG-KSPYLYPLYGLGELPQGFARLSA 245
Query: 242 ASGAQLFTSQTVTEITLDSDKRASGVVTNGLEIKAKYVLSNTT 284
G ++ V +I ++ + + GV + G + K ++ + +
Sbjct: 246 IYGGTYMLNKPVDDIIME-NGKVVGVKSEGEVARCKQLICDPS 287
>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase
{Myxococcus xanthus [TaxId: 34]}
Length = 347
Score = 92.5 bits (228), Expect = 4e-21
Identities = 48/334 (14%), Positives = 89/334 (26%), Gaps = 25/334 (7%)
Query: 2 AGHNGLVSAAYLARAGLSVAVLERRHVLGGAAVTEEIIPGFQFSRASYLLSLLRPHIYKD 61
G +GL A +L G +LE LGGA T + G+ + P
Sbjct: 8 GGISGLAVAHHLRSRGTDAVLLESSARLGGAVGTHA-LAGYLVEQGPNSFLDREPATRAL 66
Query: 62 LELKKHGLKLLTRDPRSYTPLSPDKWTNKAKSLTLGLDPQKNYEQIARFSVKDAQNFEKY 121
++ DP + + ++ + + + + F +
Sbjct: 67 AAALNLEGRIRAADPAAKRRYVYTRGRLRSVPASPPAFLASDILPLGARLRVAGELFSRR 126
Query: 122 DHHIEEITNLLDPLFDIAPHDFGNLLMYNLFTRRGEMKDVYSLLTCSAFSILNDWFESEP 181
+ + + LL + S+
Sbjct: 127 APEGVDESLAAFGRRHLGHRATQVLLDAVQTGIYAGDVEQLSV-----------AATFPM 175
Query: 182 LKATLLTDGLIGAMVSPHSPSTSYVLLHHVMGGAEGVKGAWAYPEGGMGAVSQALARSAQ 241
L + + L G A + GA + +GG+ + ALA S
Sbjct: 176 LVKMEREHRSLILGAIRAQKAQRQAALP--AGTAPKLSGALSTFDGGLQVLIDALAASLG 233
Query: 242 ASGAQLFTSQTVTEITLDSDKRASGVVTNG--LEIKAKYVLSNTTAKCTLLDLIPKGNLD 299
V + + + +G E+ V+ A L+ LD
Sbjct: 234 ---DAAHVGARVEGLAREDGGWRLIIEEHGRRAELSVAQVVLAAPAH-ATAKLLR--PLD 287
Query: 300 ERTTQAVQSID---YASPVTKINVALKSIPNFLA 330
+ V I + V I+ AL+ +P
Sbjct: 288 DALAALVAGIYNLGHLERVAAIDAALQRLPGLHL 321
>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human
(Homo sapiens) [TaxId: 9606]}
Length = 383
Score = 89.8 bits (221), Expect = 5e-20
Identities = 61/394 (15%), Positives = 106/394 (26%), Gaps = 39/394 (9%)
Query: 2 AGHNGLVSAAYLARAGLSVAVLERRHVLGGAAVTEEIIPGFQFSRASYLLSLLRPHIYKD 61
G +G+ +A L +GL+V VLE R +GG T + + I +
Sbjct: 7 GGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYTLRNQKVKYVDLGGSYVGPTQNRILR- 65
Query: 62 LELKKHGLKLLTRDPRSYTPLSPDKWTNKAKSLTLGLDPQKNYEQIARFSVKDAQNFEKY 121
K+ GL+ + + + + Y F +
Sbjct: 66 -LAKELGLETYKVNEVERLIHHVKGKSYPFRGPFPPVWNPITYLDHNNFWRTMDDMGREI 124
Query: 122 DHHIEEITNLLDPLFDIAPHDFGNLLMYNLFTRRGEMKDVYSLLTCSAFSILNDWFESEP 181
P ++ N+ M L + + L T +
Sbjct: 125 PS--------DAPWKAPLAEEWDNMTMKELLDKLCWTESAKQLATLFVNLCVTAETHEVS 176
Query: 182 LKATLLTDGLIGAMVSPHSPSTSYVLLHHVMGGAEGVKGAWAYPEGGMGAVSQALARSAQ 241
L G S + G GG G VS+ R
Sbjct: 177 ALWFLWYVKQCGGTTRIISTTNG---------------GQERKFVGGSGQVSE---RIMD 218
Query: 242 ASGAQLFTSQTVTEITLDSDKRASGVVTNGLEIKAKYVLSNTTAKCTLLDLIPKGNLDER 301
G ++ + V I + + N +AKYV+S + + L
Sbjct: 219 LLGDRVKLERPVIYID-QTRENVLVETLNHEMYEAKYVISAIPPTL-GMKIHFNPPLPMM 276
Query: 302 TTQAVQSIDYASPVTKINVALKSIPN--FLADPNPSENTVQPHHHGSIHLNCEDMQQVFD 359
Q + + +T+ L+ + + A + H G + E ++
Sbjct: 277 RNQMITRVFPPGILTQYGRVLRQPVDRIYFAGTETA-----THWSGYMEGAVEAGERAAR 331
Query: 360 AYQDATQGIPSTRPMIEMVLPSSLDNTLSPPGHH 393
A IP I P S+D P
Sbjct: 332 EILHAMGKIPEDE--IWQSEPESVDVPAQPITTT 363
>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase
{Tobacco (Nicotiana tabacum) [TaxId: 4097]}
Length = 373
Score = 86.4 bits (212), Expect = 6e-19
Identities = 46/341 (13%), Positives = 105/341 (30%), Gaps = 20/341 (5%)
Query: 2 AGHNGLVSAAYLARAGLSVAVLERRHVLGGAAVTEEIIPGFQFSRASYLLSLLRPHIYKD 61
AG +GL +A L GL+V V E GG + G + + ++ +
Sbjct: 9 AGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKLRSVS-QDGLIWDEGANTMTESEGDVTFL 67
Query: 62 LELKKHGLKLLTRDPRSYTPLSPDKWTNKAKSLTLGLDPQKNYEQIARFSVKDAQNFEKY 121
++ K ++ ++ + S + L ++ +
Sbjct: 68 IDSLGLREKQQFPLSQNKRYIARNGTPVLLPSNPIDLIKSNFLSTGSKL-QMLLEPILWK 126
Query: 122 DHHIEEITNLLDPLFDIAPHDFGNLLMYNLFTRRGEMKDVYSLLTCSAFSILNDWFESEP 181
+ + ++++ + + FG ++ L + S + + E
Sbjct: 127 NKKLSQVSDSHESVSGFFQRHFGKEVVDYLIDPFVAGTCGGDPDSLSMHHSFPELWNLEK 186
Query: 182 LKATLLTDGLIGAMVSPHSPSTSYVLLHHVMGGAEGVKGAWAYPEGGMGAVSQALARSAQ 241
++ ++GA+ S SP + + GGM ++ A+ + +
Sbjct: 187 RFGSV----ILGAIRSKLSPKNEKKQGPPKTSANKKRQRGSFSFLGGMQTLTDAICKDLR 242
Query: 242 ASGAQLFTSQTVTEITLDSDK----------RASGVVTNGLEIKAKYVLSNTTAKCTL-L 290
+L + V E++ + AS E V+ +
Sbjct: 243 --EDELRLNSRVLELSCSCTEDSAIDSWSIISASPHKRQSEEESFDAVIMTAPLCDVKSM 300
Query: 291 DLIPKGN-LDERTTQAVQSIDYASPVTKINVALKSIPNFLA 330
+ +GN V +Y S + I+ K++P
Sbjct: 301 KIAKRGNPFLLNFIPEVYGHNYDSVLDAIDKMEKNLPGLFY 341
>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan
pit viper (Calloselasma rhodostoma) [TaxId: 8717]}
Length = 370
Score = 68.6 bits (166), Expect = 3e-13
Identities = 50/325 (15%), Positives = 99/325 (30%), Gaps = 37/325 (11%)
Query: 2 AGHNGLVSAAYLARAGLSVAVLERRHVLGGAAVTEEIIPGFQFSRASYLLSLLRPHIYKD 61
AG GL +A LA AG V VLE GG T ++ + + I ++
Sbjct: 38 AGMAGLSAAYVLAGAGHQVTVLEASERPGGRVRTYRNEEAGWYANLGPMRLPEKHRIVRE 97
Query: 62 LELKKHGLKLLTRDPRSYTPLSPDKWTNKAKSLTLGLDPQKNYEQIARFSVKDAQNFEKY 121
++K L+L ++ + + W + +K+ +
Sbjct: 98 Y-IRKFDLRL-----NEFSQENDNAWYFIKNIRKKVGEVKKDPGLLKYPVKPSEAGKSAG 151
Query: 122 DHHIEEITNLLDPLFDIAPHDFGNLLMYNLFTRRGEMKDVYSLLTCSAFSILNDWFESEP 181
+ E + +++ L N T S L + P
Sbjct: 152 QLYEESLGKVVEELKRTNCSYILNKYD-----------------TYSTKEYLIKEGDLSP 194
Query: 182 LKATLLTDGLIGAMVSPHSPSTSYVLLHHVMGGAEGVKGAWAYPEGGMGAVSQALARSAQ 241
+IG +++ S + + + GM + A+ R
Sbjct: 195 GAVD-----MIGDLLNEDSGYYVSFIESLKHDDIFAYEKRFDEIVDGMDKLPTAMYR--- 246
Query: 242 ASGAQLFTSQTVTEITLDSDK---RASGVVTNGLEIKAKYVLSNTTAKCT-LLDLIPKGN 297
++ + V +I + K + + A YV+ TT++ L+ P
Sbjct: 247 DIQDKVHFNAQVIKIQQNDQKVTVVYETLSKETPSVTADYVIVCTTSRAVRLIKFNPP-- 304
Query: 298 LDERTTQAVQSIDYASPVTKINVAL 322
L + A++S+ + L
Sbjct: 305 LLPKKAHALRSVFTPYQFQHFSDPL 329
>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone
demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 449
Score = 67.6 bits (163), Expect = 1e-12
Identities = 32/266 (12%), Positives = 73/266 (27%), Gaps = 35/266 (13%)
Query: 2 AGHNGLVSAAYLARAGLSVAVLERRHVLGGAAVTEEIIPGFQFSR-ASYLLSLLRPHIYK 60
+G +GL +A L G+ V +LE R +GG T + A + L +
Sbjct: 13 SGVSGLAAARQLQSFGMDVTLLEARDRVGGRVATFR-KGNYVADLGAMVVTGLGGNPMAV 71
Query: 61 DLELKKHGLKLLTRDPRSYTPLSPDKWTNKAKSLTLGLDPQKNYEQIARFSVKDAQNFEK 120
K+ ++L + + + KD ++
Sbjct: 72 --VSKQVNMELAKIKQKCPLYEANGQA---------------------VPKEKDEMVEQE 108
Query: 121 YDHHIEEITNLLDPLFDIAPHDFGNLLMYNLFTRRGEMKDVYSLLTCSAFSILNDWFESE 180
++ +E + L L ++ G+ +V L +
Sbjct: 109 FNRLLEATSYLSHQLDFNVLNN--------KPVSLGQALEVVIQLQEKHVKDEQIEHWKK 160
Query: 181 PLKATLLTDGLIGAMVSPHSPSTSYVLLHHVMGGAEGVKG--AWAYPEGGMGAVSQALAR 238
+K L+ MV+ + + + A + ++
Sbjct: 161 IVKTQEELKELLNKMVNLKEKIKELHQQYKEASEVKPPRDITAEFLVKSKHRDLTALCKE 220
Query: 239 SAQASGAQLFTSQTVTEITLDSDKRA 264
+ + Q + + E+ +
Sbjct: 221 YDELAETQGKLEEKLQELEANPPSDV 246
>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea
mays) [TaxId: 4577]}
Length = 347
Score = 57.3 bits (136), Expect = 1e-09
Identities = 38/314 (12%), Positives = 82/314 (26%), Gaps = 30/314 (9%)
Query: 2 AGHNGLVSAAYLARAGLS-VAVLERRHVLGGAAVTEEIIPGFQFSRASYLLSLLRPHIYK 60
AG +G+ +A L+ AG++ + +LE +GG G + + +
Sbjct: 8 AGMSGISAAKRLSEAGITDLLILEATDHIGGRMHKTN-FAGINVELGANWVEGVNGGKMN 66
Query: 61 DLELKKHGLKLLTRDPRSYTPLSPDKWTNKAKSLTLGLDPQKNYEQIARFSVKDAQNFEK 120
+ + L + L+ + + E + Q +
Sbjct: 67 PIWPIVNSTLKLRNFRSDFDYLAQNVY----------------KEDGGVYDEDYVQKRIE 110
Query: 121 YDHHIEEITNLLDPLFDIAPHDFGNLLMYNLFTRRGEMKDVYSLLTCSAFSILNDWFESE 180
+EE+ L + D ++L + + + F
Sbjct: 111 LADSVEEMGEKLSATLHASGRDDMSILAMQRLNEHQPNGPATPVDMVVDYYKFDYEFAEP 170
Query: 181 PLKATLLTDGLIGAMVSPHSPSTSYVLLHHVMGGAEGVKGAWAYPEGGMGAVSQALARSA 240
P +L + + G + + G + +
Sbjct: 171 PRVTSLQNTVPLATFSDFGDDVYFVADQRGYEAVVYYLAGQYLKTDDKSGKIVDPRLQLN 230
Query: 241 QASGAQLFTSQTVTEITLDSDKRASGVVTNGLEIKAKYVLSNTTAKCTLLDLIP-KGNLD 299
+ ++ VT T + A YV+ + + DLI K L
Sbjct: 231 KVVREIKYSPGGVTVKT-----------EDNSVYSADYVMVSASLGVLQSDLIQFKPKLP 279
Query: 300 ERTTQAVQSIDYAS 313
+A+
Sbjct: 280 TWKVRAIYQFWPVG 293
>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide
dehydrogenase {Garden pea (Pisum sativum) [TaxId:
3888]}
Length = 221
Score = 43.7 bits (102), Expect = 2e-05
Identities = 14/56 (25%), Positives = 23/56 (41%)
Query: 2 AGHNGLVSAAYLARAGLSVAVLERRHVLGGAAVTEEIIPGFQFSRASYLLSLLRPH 57
G G V+A A+ G +E+R LGG + IP +S++ +
Sbjct: 11 GGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHS 66
>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide
dehydrogenase {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 233
Score = 43.7 bits (102), Expect = 2e-05
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 2 AGHNGLVSAAYLARAGLSVAVLERRHVLGGAAVT 35
G G V+A A+ G + A +E+R LGG +
Sbjct: 13 GGPAGYVAAIKAAQLGFNTACVEKRGKLGGTCLN 46
>d1ojta1 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide
dehydrogenase {Neisseria meningitidis [TaxId: 487]}
Length = 229
Score = 43.4 bits (101), Expect = 2e-05
Identities = 16/56 (28%), Positives = 24/56 (42%)
Query: 2 AGHNGLVSAAYLARAGLSVAVLERRHVLGGAAVTEEIIPGFQFSRASYLLSLLRPH 57
G G +A A GL VA++ER LGG + IP + ++ +R
Sbjct: 14 GGPGGYSAAFAAADEGLKVAIVERYKTLGGVCLNVGCIPSKALLHNAAVIDEVRHL 69
>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase,
N-terminal domain {Escherichia coli [TaxId: 562]}
Length = 298
Score = 42.9 bits (100), Expect = 5e-05
Identities = 25/151 (16%), Positives = 44/151 (29%), Gaps = 11/151 (7%)
Query: 2 AGHNGLVSAAYLARAGLSVAVLERRHVLGGAAVTEEIIPGFQFSRASYLLSLLRPHIYKD 61
+G G V A L + V V+E+R+ +GG A TE+ G Q + Y + +
Sbjct: 9 SGLFGAVCANELKKLNKKVLVIEKRNHIGGNAYTED-CEGIQIHK--YGAHIFHTNDKYI 65
Query: 62 LELKKHGLKLLTRDPRSYTPLSPDKWTNKAKSLTLGLDPQKNYEQIARFSVKDAQNFEKY 121
+ ++ + T Q A+ + +
Sbjct: 66 WDYVNDLVEFNRFTNSPLAIYKDKLFNLPFNMNTFHQMWGVKDPQEAQNIINAQKKKYGD 125
Query: 122 DHHIEEITNLLDPLFDIAPHDFGNLLMYNLF 152
+ L + A G L L
Sbjct: 126 KVP--------ENLEEQAISLVGEDLYQALI 148
>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus
cereus [TaxId: 1396]}
Length = 251
Score = 42.0 bits (97), Expect = 8e-05
Identities = 10/30 (33%), Positives = 18/30 (60%)
Query: 2 AGHNGLVSAAYLARAGLSVAVLERRHVLGG 31
G +GL++A A G +V +L++ + LG
Sbjct: 10 GGPSGLMAAIGAAEEGANVLLLDKGNKLGR 39
>d1onfa1 c.3.1.5 (A:1-153,A:271-376) Glutathione reductase
{Plasmodium falciparum [TaxId: 5833]}
Length = 259
Score = 41.6 bits (96), Expect = 1e-04
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 2 AGHNGLVSAAYLARAGLSVAVLERRHVLGGAAVTEEIIP 40
G G+ +A AR VA++E+ LGG V +P
Sbjct: 9 GGSGGMAAARRAARHNAKVALVEKSR-LGGTCVNVGCVP 46
>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO
{Bacillus sp. [TaxId: 1409]}
Length = 276
Score = 41.3 bits (95), Expect = 1e-04
Identities = 9/31 (29%), Positives = 13/31 (41%)
Query: 2 AGHNGLVSAAYLARAGLSVAVLERRHVLGGA 32
G G A YLA+ + A+ E + G
Sbjct: 12 GGIIGSAIAYYLAKENKNTALFESGTMGGRT 42
>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase,
N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}
Length = 314
Score = 40.9 bits (95), Expect = 2e-04
Identities = 18/132 (13%), Positives = 37/132 (28%), Gaps = 10/132 (7%)
Query: 2 AGHNGLVSAAYLARAGLSVAVLERRHVLGGAAVTEEIIPGFQFSRASYLLSLLRPHIYKD 61
AG +G V LA G V ++++R +GG + Y +
Sbjct: 10 AGFSGAVIGRQLAEKGHQVHIIDQRDHIGGNSYD-ARDSETNVMVHVYGPHIFHTDNETV 68
Query: 62 LELKKHGLKLLTRDPRSYT---------PLSPDKWTNKAKSLTLGLDPQKNYEQIARFSV 112
+++ R P++ + + + ++
Sbjct: 69 WNYVNKHAEMMPYVNRVKATVNGQVFSLPINLHTINQFFSKTCSPDEARALIAEKGDSTI 128
Query: 113 KDAQNFEKYDHH 124
D Q FE+
Sbjct: 129 ADPQTFEEEALR 140
>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3
(respiratory fumarate reductase) {Shewanella
frigidimarina [TaxId: 56812]}
Length = 308
Score = 40.8 bits (94), Expect = 3e-04
Identities = 33/230 (14%), Positives = 55/230 (23%), Gaps = 12/230 (5%)
Query: 2 AGHNGLVSAAYLARAGLSVAVLERRHVLGGAAVTEEIIPGFQFSRASYLLSLLRPHIYKD 61
+G G +A +G V ++E+ V+GG A ++ +
Sbjct: 24 SGGAGFSAAISATDSGAKVILIEKEPVIGGNAKLAAGGMNAAWTDQQKAKKITDSPELMF 83
Query: 62 LELKKHGLKLLTRDPRSYTPLSPDKWTNKAKSLTLGLDPQKNYEQIARFSVKDAQNFEKY 121
+ K G + DP LS + +G D + +
Sbjct: 84 EDTMKGGQNI--NDPALVKVLSSHSKDSVDWMTAMGADLTDVGMMGGASVNRAHRPTGGA 141
Query: 122 DHHIEEITNLLDPLFDIAPHDFGNLLMYNLFTRRGEMKDVYSLLTCSAFSILNDWFESEP 181
+ L D N + +
Sbjct: 142 GVGAHVVQVLYDNAVKRNIDLRMNTRGIEVLKDDKGTVKGILVKGMYKGYYWV------K 195
Query: 182 LKATLLTDGLIGA---MVSPHSPSTSYVLLHHVMGGAEGVKGAWAYPEGG 228
A +L G V+ PS + GA G A GG
Sbjct: 196 ADAVILATGGFAKNNERVAKLDPSLKG-FISTNQPGAVGDGLDVAENAGG 244
>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus
sp., strain b0618 [TaxId: 1409]}
Length = 281
Score = 40.5 bits (93), Expect = 3e-04
Identities = 6/32 (18%), Positives = 13/32 (40%)
Query: 2 AGHNGLVSAAYLARAGLSVAVLERRHVLGGAA 33
AG G+ + LA+ G+ +++
Sbjct: 11 AGSMGMAAGYQLAKQGVKTLLVDAFDPPHTNG 42
>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933
{Haemophilus influenzae [TaxId: 727]}
Length = 253
Score = 39.9 bits (92), Expect = 4e-04
Identities = 21/139 (15%), Positives = 43/139 (30%), Gaps = 10/139 (7%)
Query: 2 AGHNGLVSAAYLARAGLSVAVLERRHVLGGAAVT----------EEIIPGFQFSRASYLL 51
AG GL AA LA+ G SV V + +G + E+ P S+ + +
Sbjct: 12 AGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFV 71
Query: 52 SLLRPHIYKDLELKKHGLKLLTRDPRSYTPLSPDKWTNKAKSLTLGLDPQKNYEQIARFS 111
+ + +T + L D+ + + + + + R
Sbjct: 72 KSALARYTNWDFISLVAEQGITYHEKELGQLFCDEGAEQIVEMLKSECDKYGAKILLRSE 131
Query: 112 VKDAQNFEKYDHHIEEITN 130
V + + + +
Sbjct: 132 VSQVERIQNDEKVRFVLQV 150
>d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC
family {Streptomyces sp. [TaxId: 1931]}
Length = 367
Score = 40.4 bits (93), Expect = 4e-04
Identities = 19/143 (13%), Positives = 27/143 (18%), Gaps = 4/143 (2%)
Query: 2 AGHNGLVSAAYLARAGLSVAVLERRHVLGGAAVTEEIIPGFQFSRASYLLSLLRPHIYKD 61
G+ VSA L AG+ +LE + I G R
Sbjct: 10 TGYGAAVSALRLGEAGVQTLMLEMGQLWNQPGPDGNIFCGMLNPDKRSSWFKNRTEAPLG 69
Query: 62 LELKKHGLKLLTRDPRSYTPLSPDKWTNKAKSLTLGLDPQKNYEQIARFSVKDAQNFEKY 121
L + + +G N +
Sbjct: 70 SFLWLDVVNRNIDPYAGVLDRVNYDQMSVYVGRGVGGGSLVNGGMAVEPKRSYFEEILPR 129
Query: 122 DHHIEEITNLLDPLFDIAPHDFG 144
E D F A
Sbjct: 130 VDSSEM----YDRYFPRANSMLR 148
>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase
{Thermobifida fusca [TaxId: 2021]}
Length = 298
Score = 39.8 bits (92), Expect = 5e-04
Identities = 12/30 (40%), Positives = 16/30 (53%)
Query: 2 AGHNGLVSAAYLARAGLSVAVLERRHVLGG 31
AG +GL + L G SV V+E +GG
Sbjct: 15 AGFSGLYALYRLRELGRSVHVIETAGDVGG 44
>d3lada1 c.3.1.5 (A:1-158,A:278-348) Dihydrolipoamide dehydrogenase
{Azotobacter vinelandii [TaxId: 354]}
Length = 229
Score = 39.3 bits (90), Expect = 6e-04
Identities = 24/149 (16%), Positives = 41/149 (27%), Gaps = 2/149 (1%)
Query: 2 AGHNGLVSAAYLARAGLSVAVLERRHVLGGAAVTEEIIPGFQFSRASYLLSLLRPHIYKD 61
AG G V+A A+ GL A++E+ G + LL
Sbjct: 11 AGPGGYVAAIKSAQLGLKTALIEKYKGKEGKTALGGTCLNVGCIPSKALLDSSYKFHEAH 70
Query: 62 LELKKHGLKLLTRDPRSYTPLSPDKWTNKAKSLTLGLDPQKNYEQIARFSVKDAQNFEKY 121
K HG+ T + P + ++LT G+ + F K
Sbjct: 71 ESFKLHGIS--TGEVAIDVPTMIARKDQIVRNLTGGVASLIKANGVTLFEGHGKLLAGKK 128
Query: 122 DHHIEEITNLLDPLFDIAPHDFGNLLMYN 150
+ + G+ +
Sbjct: 129 VEVTAADGSSQVLDTENVILASGSKPVEI 157
>d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4
{Thale cress(Arabidopsis thaliana) [TaxId: 3702]}
Length = 278
Score = 39.1 bits (90), Expect = 8e-04
Identities = 10/31 (32%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Query: 2 AGHNGLVSAAYLAR-AGLSVAVLERRHVLGG 31
AG GL +A +++ + VA++E+ GG
Sbjct: 41 AGSAGLSAAYEISKNPNVQVAIIEQSVSPGG 71
>d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3
(respiratory fumarate reductase) {Shewanella
frigidimarina [TaxId: 56812]}
Length = 317
Score = 38.8 bits (89), Expect = 0.001
Identities = 8/33 (24%), Positives = 18/33 (54%)
Query: 2 AGHNGLVSAAYLARAGLSVAVLERRHVLGGAAV 34
AG G ++ +AG +V ++++ GG ++
Sbjct: 27 AGSAGFNASLAAKKAGANVILVDKAPFSGGNSM 59
>d3coxa1 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of GMC
family {Brevibacterium sterolicum [TaxId: 1702]}
Length = 370
Score = 39.1 bits (90), Expect = 0.001
Identities = 35/290 (12%), Positives = 68/290 (23%), Gaps = 35/290 (12%)
Query: 2 AGHNGLVSAAYLARAGLSVAVLERRHVLGGAAVTEEIIPGFQFSRASYLLSLLRPHIYKD 61
+G+ G V+A L +AG+ ++E G + G F K
Sbjct: 15 SGYGGAVAALRLTQAGIPTQIVEM-----GRSWDTPGSDGKIFCGMLNPDKRSMWLADKT 69
Query: 62 LELKKHGLKLLTRDPRSYTPLSPDKWTNKAKSLTLGLDPQKNYEQIARFSVKDAQNFEKY 121
+ + + D + G +V +N+ +
Sbjct: 70 DQPVSNFMGFGINKSIDRYVGVLDSERFSGIKVYQGRGVGGGSLVNGGMAVTPKRNYFEE 129
Query: 122 DHHIEEITNLLDPLFDIAPHDFGNLLMYNLFTRRGEMKDVYSLLTCSAFSILNDWFESEP 181
+ + + F A G + + E
Sbjct: 130 ILPSVDSNEMYNKYFPRANTGLGVNNIDQAWFESTEWYKF------------ARTGRKTA 177
Query: 182 LKATLLTDGLIGAMVSPHSPSTSYVLLHHVMGGAEGVKGAWAYPEGGMGAVSQA---LAR 238
++ P+ Y+ + G G S LA+
Sbjct: 178 QRSGF------TTAFVPNVYDFEYMKKEAAGQVTKSGLGGEVIYGNNAGKKSLDKTYLAQ 231
Query: 239 SAQASGAQLFTSQTVTEITLDSDKR---------ASGVVTNGLEIKAKYV 279
+A + T VT++ + G V + A V
Sbjct: 232 AAATGKLTITTLHRVTKVAPATGSGYSVTMEQIDEQGNVVATKVVTADRV 281
>d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3
(respiratory fumarate reductase) {Shewanella
putrefaciens [TaxId: 24]}
Length = 322
Score = 38.8 bits (89), Expect = 0.001
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 2 AGHNGLVSAAYLARAGLSVAVLERRHVLGGAAV 34
+G GL +A AG V +LE+ + GG
Sbjct: 31 SGGAGLAAAVSARDAGAKVILLEKEPIPGGNTK 63
>d1vg0a1 c.3.1.3 (A:3-444,A:558-606) Rab escort protein 1 {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 491
Score = 38.5 bits (89), Expect = 0.002
Identities = 24/117 (20%), Positives = 40/117 (34%), Gaps = 11/117 (9%)
Query: 179 SEPLKATLLTDGLIG------AMVSPHSPSTSYVL---LHHVMGGAEGVKGAWAYPEGGM 229
SE LK LT L AM S + T L + + +P G
Sbjct: 316 SEYLKTQKLTPNLQYFVLHSIAMTSETTSCTVDGLKATKKFLQCLGRYGNTPFLFPLYGQ 375
Query: 230 GAVSQALARSAQASGAQLFTSQTVTEITLDSD-KRASGVVT-NGLEIKAKYVLSNTT 284
G + Q R G +V + +D + ++ V+ G I +K+ + +
Sbjct: 376 GELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIEDS 432
>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase,
N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}
Length = 268
Score = 37.7 bits (86), Expect = 0.002
Identities = 13/31 (41%), Positives = 16/31 (51%)
Query: 2 AGHNGLVSAAYLARAGLSVAVLERRHVLGGA 32
+G GL SA LAR G SV +L R +
Sbjct: 14 SGVIGLSSALILARKGYSVHILARDLPEDVS 44
>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase
{Escherichia coli [TaxId: 562]}
Length = 217
Score = 37.2 bits (85), Expect = 0.002
Identities = 12/56 (21%), Positives = 22/56 (39%), Gaps = 1/56 (1%)
Query: 2 AGHNGLVSAAYLARAGLSVAVLERRHVLGGAAVTEEIIPGFQFSRASYLLSLLRPH 57
G G+ S A G A++E + + GG V +P A+ + + +
Sbjct: 10 GGSGGIASINRAAMYGQKCALIEAKEL-GGTCVNVGCVPKKVMWHAAQIREAIHMY 64
>d1mo9a1 c.3.1.5 (A:2-192,A:314-383) NADH-dependent 2-ketopropyl
coenzyme M oxidoreductase/carboxylase {Xanthobacter sp.,
py2 [TaxId: 35809]}
Length = 261
Score = 37.6 bits (86), Expect = 0.002
Identities = 16/56 (28%), Positives = 23/56 (41%)
Query: 2 AGHNGLVSAAYLARAGLSVAVLERRHVLGGAAVTEEIIPGFQFSRASYLLSLLRPH 57
G G +AYL G +++R LGG+ +P FS + L L R
Sbjct: 50 GGAAGRFGSAYLRAMGGRQLIVDRWPFLGGSCPHNACVPHHLFSDCAAELMLARTF 105
>d2gjca1 c.3.1.6 (A:16-326) Thiazole biosynthetic enzyme Thi4
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 311
Score = 37.6 bits (86), Expect = 0.002
Identities = 11/44 (25%), Positives = 20/44 (45%), Gaps = 3/44 (6%)
Query: 2 AGHNGLVSAAYLARA--GLSVAVLERRHVLGGAAV-TEEIIPGF 42
AG +GL +A +A+ L V ++E GG + ++
Sbjct: 58 AGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAM 101
>d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide
dehydrogenase {Bacillus stearothermophilus [TaxId:
1422]}
Length = 223
Score = 37.1 bits (85), Expect = 0.003
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 2 AGHNGLVSAAYLARAGLSVAVLERRHVLGGAAVTEEIIPGFQFSRASY 49
AG G V+A A+ G V ++E+ + LGG + IP AS+
Sbjct: 11 AGPGGYVAAIRAAQLGQKVTIVEKGN-LGGVCLNVGCIPSKALISASH 57
>d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human
(Homo sapiens) [TaxId: 9606]}
Length = 221
Score = 36.4 bits (83), Expect = 0.004
Identities = 14/33 (42%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Query: 2 AGHNGLVSAAYLARAGLSVAVLERRHVLGGAAV 34
G GL SA A G AV+E LGG V
Sbjct: 11 GGSGGLASARRAAELGARAAVVESHK-LGGTCV 42
>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate
hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}
Length = 292
Score = 36.1 bits (82), Expect = 0.008
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 2 AGHNGLVSAAYLARAGLSVAVLERR 26
AG +GL+ L +AG+ +LER+
Sbjct: 10 AGPSGLLLGQLLHKAGIDNVILERQ 34
>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase
DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}
Length = 265
Score = 35.9 bits (81), Expect = 0.008
Identities = 10/26 (38%), Positives = 13/26 (50%)
Query: 2 AGHNGLVSAAYLARAGLSVAVLERRH 27
+GL +A L AG+ V V ER
Sbjct: 12 GSISGLTAALMLRDAGVDVDVYERSP 37
>d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehydrogenase
{Pseudomonas putida [TaxId: 303]}
Length = 220
Score = 35.4 bits (80), Expect = 0.009
Identities = 20/124 (16%), Positives = 34/124 (27%), Gaps = 3/124 (2%)
Query: 2 AGHNGLVSAAYLARAGLSVAVLERRHVLGGAAVTEEIIPGFQFSRASYLLSLLRPHIYKD 61
G G V+A + G+ ++E + + G I A R
Sbjct: 13 GGPGGYVAAIRAGQLGIPTVLVEGQALGGTCLNIGCIPSKALIHVAEQFHQASRFTEPSP 72
Query: 62 LELKKHGLKLLTRDPRSYTPLSPDKWTNKAKSLTLGLDPQKNYEQIARFSVKDAQNFEKY 121
L + +L ++ D+ T +L L V D + E
Sbjct: 73 LGISVASPRLDIGQSVAWKDGIVDRLTTGVAAL---LKKHGVKVVHGWAKVLDGKQVEVD 129
Query: 122 DHHI 125
I
Sbjct: 130 GQRI 133
>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase
{Escherichia coli [TaxId: 562]}
Length = 190
Score = 35.2 bits (80), Expect = 0.010
Identities = 11/43 (25%), Positives = 16/43 (37%)
Query: 2 AGHNGLVSAAYLARAGLSVAVLERRHVLGGAAVTEEIIPGFQF 44
+G G +A Y ARA L ++ G T E+
Sbjct: 13 SGPAGYTAAVYAARANLQPVLITGMEKGGQLTTTTEVENWPGD 55
>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide
reductase subunit F (AhpF), C-terminal domains
{Escherichia coli [TaxId: 562]}
Length = 184
Score = 35.1 bits (79), Expect = 0.010
Identities = 8/25 (32%), Positives = 13/25 (52%)
Query: 2 AGHNGLVSAAYLARAGLSVAVLERR 26
+G G +A Y AR G+ ++ R
Sbjct: 9 SGPAGAAAAIYSARKGIRTGLMGER 33
>d1xdia1 c.3.1.5 (A:2-161,A:276-348) Dihydrolipoamide
dehydrogenase {Mycobacterium tuberculosis [TaxId:
1773]}
Length = 233
Score = 35.0 bits (79), Expect = 0.013
Identities = 13/46 (28%), Positives = 21/46 (45%), Gaps = 4/46 (8%)
Query: 2 AGHNGLVSAAYLARAGL---SVAVLERRHVLGGAAVTEEIIPGFQF 44
G G +A A + V V++ +GGAAV ++ +P F
Sbjct: 9 GGPAGYEAALVAATSHPETTQVTVIDCDG-IGGAAVLDDCVPSKTF 53
>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase,
N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}
Length = 246
Score = 34.8 bits (79), Expect = 0.017
Identities = 8/32 (25%), Positives = 10/32 (31%)
Query: 2 AGHNGLVSAAYLARAGLSVAVLERRHVLGGAA 33
AG GL +A + SV V
Sbjct: 8 AGVIGLSTALCIHERYHSVLQPLDVKVYADRF 39
>d1tisa_ d.117.1.1 (A:) Thymidylate synthase {Bacteriophage T4
[TaxId: 10665]}
Length = 286
Score = 34.7 bits (79), Expect = 0.017
Identities = 15/99 (15%), Positives = 32/99 (32%), Gaps = 9/99 (9%)
Query: 27 HVLGGAAVTEEIIPGFQFSRASYLLSLLRPHIYK-DLELKKHGLKLLTRDPRSYTPLSPD 85
++ A + + + S HIY +E K ++L R+P+ +
Sbjct: 187 NIASYATLVHIVAKMCNLIPGDLIFSGGNTHIYMNHVEQCK---EILRREPKEL----CE 239
Query: 86 KWTNKAKSLTLGLDPQKNYEQIARFSVKDAQNFEKYDHH 124
+ L ++ + + + KD Y H
Sbjct: 240 LVISGLPYKFRYLSTKEQLKYVLKLRPKDFV-LNNYVSH 277
>d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot
fungus (Peniophora sp. SG) [TaxId: 204723]}
Length = 379
Score = 35.0 bits (79), Expect = 0.020
Identities = 25/268 (9%), Positives = 61/268 (22%), Gaps = 23/268 (8%)
Query: 2 AGHNGLVSAAYLARAGLSVAVLERRHVLGGAAVTEEIIPGFQFSRASYLLSLLRPHIYKD 61
+G G A L AG VA+ + G +I + + + +
Sbjct: 12 SGPIGCTYARELVGAGYKVAMFDI----GEIDSGLKIGAHK----KNTVEYQKNIDKFVN 63
Query: 62 LELKKHGLKLLTRDPRSYTPLSPDKWTNKAKSLTLGLDPQKNYEQIARFSVKDAQNFEKY 121
+ + + + LSP W + G +P+++ +
Sbjct: 64 VIQGQLMSVSVPVNTLVVDTLSPTSWQASTFFVRNGSNPEQDPLRNLSGQAVTRVVGGMS 123
Query: 122 DHHIEEITNLLDPLFDIAPHDFGNLLMYNLFTRRGEMKDVYSLLTCSAFSILNDWFESEP 181
H + D + + + + + +
Sbjct: 124 THWTCATPRFDREQRPLLVKDDADADDAEWDRLYTKAESYFQ----TGTDQFKESIRHNL 179
Query: 182 LKATLLTDGLIGAMVSPHSPSTSYVLLHHVMGGAEGVKGAWAYPEGGMGAVSQALARSAQ 241
+ L + L V+ + A + + A
Sbjct: 180 VLNKLAEEYKGQRDFQQIP-------LAATRRSPTFVEWSSA---NTVFDLQNRPNTDAP 229
Query: 242 ASGAQLFTSQTVTEITLDSD-KRASGVV 268
LF + + ++ +
Sbjct: 230 EERFNLFPAVACERVVRNALNSEIESLH 257
>d2cula1 c.3.1.7 (A:2-231) GidA-related protein TTHA1897 {Thermus
thermophilus [TaxId: 274]}
Length = 230
Score = 34.2 bits (78), Expect = 0.023
Identities = 13/61 (21%), Positives = 24/61 (39%), Gaps = 2/61 (3%)
Query: 2 AGHNGLVSAAYLARAGLSVAVLERR--HVLGGAAVTEEIIPGFQFSRASYLLSLLRPHIY 59
AG +G +A +LA+ G+ V +L + V+ + P +Y R +
Sbjct: 10 AGFSGAETAFWLAQKGVRVGLLTQSLDAVMMPFLPPKPPFPPGSLLERAYDPKDERVWAF 69
Query: 60 K 60
Sbjct: 70 H 70
>d2bs2a2 c.3.1.4 (A:1-250,A:372-457) Fumarate reductase {Wolinella
succinogenes [TaxId: 844]}
Length = 336
Score = 34.7 bits (78), Expect = 0.024
Identities = 10/33 (30%), Positives = 13/33 (39%)
Query: 2 AGHNGLVSAAYLARAGLSVAVLERRHVLGGAAV 34
G GL +A + GLS VL V +
Sbjct: 13 GGLAGLRAAVATQQKGLSTIVLSLIPVKRSHSA 45
>d1h6va1 c.3.1.5 (A:10-170,A:293-366) Mammalian thioredoxin
reductase {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 235
Score = 34.3 bits (77), Expect = 0.026
Identities = 8/30 (26%), Positives = 11/30 (36%)
Query: 2 AGHNGLVSAAYLARAGLSVAVLERRHVLGG 31
G GL +A A+ V VL+
Sbjct: 11 GGSGGLAAAKEAAKFDKKVMVLDFVTPTPL 40
>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase
SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}
Length = 335
Score = 34.2 bits (77), Expect = 0.031
Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Query: 2 AGHNGLVSAAYLARAGL--SVAVLERRHVLGG 31
AG +GLV+A L V + ERR GG
Sbjct: 12 AGPSGLVTAKALLAEKAFDQVTLFERRGSPGG 43
>d1pk3a1 a.60.1.2 (A:17-79) Polycomb protein Scm {Fruit fly
(Drosophila melanogaster) [TaxId: 7227]}
Length = 63
Score = 31.1 bits (70), Expect = 0.037
Identities = 11/51 (21%), Positives = 20/51 (39%), Gaps = 3/51 (5%)
Query: 412 WTEEDKANYATNVFSSIEQYCPGFTQDIVGYEIL---TPPDLEKEFGLTGG 459
WT E+ Y + +S+ + F + + + L + K GL G
Sbjct: 1 WTIEEVIQYIESNDNSLAVHGDLFRKHEIDGKALLRLNSEMMMKYMGLKLG 51
>d2gmha1 c.3.1.2 (A:4-236,A:336-482) Electron transfer
flavoprotein-ubiquinone oxidoreductase, EFT-QO {Pig
(Sus scrofa) [TaxId: 9823]}
Length = 380
Score = 33.3 bits (75), Expect = 0.073
Identities = 13/50 (26%), Positives = 19/50 (38%), Gaps = 11/50 (22%)
Query: 2 AGHNGLVSAAYLAR------AGLSVAVLERR-----HVLGGAAVTEEIIP 40
AG GL +A L + L V ++E+ H L GA +
Sbjct: 40 AGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAFE 89
>d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of
mitochondrial p450 systems {Cow (Bos taurus) [TaxId:
9913]}
Length = 230
Score = 32.6 bits (73), Expect = 0.091
Identities = 8/32 (25%), Positives = 15/32 (46%), Gaps = 2/32 (6%)
Query: 2 AGHNGLVSAAYLARAGL--SVAVLERRHVLGG 31
+G G +A +L + V + E++ V G
Sbjct: 9 SGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFG 40
>d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase
{Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}
Length = 192
Score = 31.8 bits (71), Expect = 0.13
Identities = 8/26 (30%), Positives = 11/26 (42%)
Query: 2 AGHNGLVSAAYLARAGLSVAVLERRH 27
+G +A Y ARA L + E
Sbjct: 13 SGPAAHTAAIYAARAELKPLLFEGWM 38
>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase
{Arthrobacter globiformis [TaxId: 1665]}
Length = 305
Score = 32.0 bits (71), Expect = 0.14
Identities = 18/124 (14%), Positives = 32/124 (25%), Gaps = 11/124 (8%)
Query: 2 AGHNGLVSAAYLARAGLS-VAVLERRHVLGGAAVTEEIIPGFQFSRASYLLSLLRPHIYK 60
AG G A L G + + VL++ + T S A L+ P
Sbjct: 9 AGIVGTNLADELVTRGWNNITVLDQGPLNMPGGST---------SHAPGLVFQTNPSKTM 59
Query: 61 DLELKKHGLKLLTRDPRSYTPLSPDKWTNKAKSLTLGLDPQKNYEQIARFSVKDAQNFEK 120
K+ ++ L + + L K A + +
Sbjct: 60 -ASFAKYTVEKLLSLTEDGVSCFNQVGGLEVATTETRLADLKRKLGYAAAWGIEGRLLSP 118
Query: 121 YDHH 124
+
Sbjct: 119 AECQ 122
>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS
{Pseudomonas aeruginosa [TaxId: 287]}
Length = 288
Score = 32.0 bits (71), Expect = 0.15
Identities = 12/37 (32%), Positives = 17/37 (45%), Gaps = 3/37 (8%)
Query: 2 AGHNGLVSAAYLARAGL-SVAVLERRHVLG--GAAVT 35
AG GL A L +AG+ V +LE + G +
Sbjct: 9 AGIGGLSCALALHQAGIGKVTLLESSSEIRPLGVGIN 45
>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine
dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId:
9823]}
Length = 196
Score = 30.9 bits (68), Expect = 0.28
Identities = 9/27 (33%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Query: 2 AGHNGLVSAAYLARAGLS-VAVLERRH 27
AG + A++LAR G S + + E++
Sbjct: 12 AGPASISCASFLARLGYSDITIFEKQE 38
>d1jnra2 c.3.1.4 (A:2-256,A:402-502) Adenylylsulfate reductase A
subunit {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Length = 356
Score = 30.7 bits (68), Expect = 0.41
Identities = 31/210 (14%), Positives = 56/210 (26%), Gaps = 23/210 (10%)
Query: 2 AGHNGLVSAAYLAR----AGLSVAVLERRHVLGGAAVTEEIIPGFQFSRASYLLSLLRPH 57
G +G +A A GL V ++E+ V AV + +Y+ R
Sbjct: 29 GGFSGCGAAYEAAYWAKLGGLKVTLVEKAAVERSGAVA-----QGLSAINTYIDLTGRSE 83
Query: 58 IYKDLELKKHGLKLLTRDPRSYTPLSPDKWTNKAKSLTLGLDPQKNYEQIARFSVKDAQN 117
LE R + + + + K
Sbjct: 84 RQNTLE-------DYVRYVTLDMMGLAREDLVADYARHVDGTVHLFEKWGLPIW-KTPDG 135
Query: 118 FEKYDHHIEEITNLLDPLFDIAPHDFGNLLMYNLFTRR------GEMKDVYSLLTCSAFS 171
+ + + + IA + N++ R + D ++ FS
Sbjct: 136 KYVREGQWQIMIHGESYKPIIAEAAKMAVGEENIYERVFIFELLKDNNDPNAVAGAVGFS 195
Query: 172 ILNDWFESEPLKATLLTDGLIGAMVSPHSP 201
+ F KA +L G + P S
Sbjct: 196 VREPKFYVFKAKAVILATGGATLLFRPRST 225
>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis
[TaxId: 1351]}
Length = 123
Score = 28.7 bits (63), Expect = 0.72
Identities = 18/125 (14%), Positives = 38/125 (30%), Gaps = 10/125 (8%)
Query: 157 EMKDVYSLLTCS-AFSILNDWFESEPLKATLLTDGLIGAMVSPHSPSTSYVLLHHVMGGA 215
++ ++Y + A + + E ++ G IG + + +
Sbjct: 5 DLDNIYLMRGRQWAIKLKQKTVDPEVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILD- 63
Query: 216 EGVKGAWAYPEGGMGAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVVTNGLEIK 275
+ L +A+ + T +TV + D R VVT+
Sbjct: 64 ------RPLGVYLDKEFTDVLTEEMEANNITIATGETVERY--EGDGRVQKVVTDKNAYD 115
Query: 276 AKYVL 280
A V+
Sbjct: 116 ADLVV 120
>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase
{Soil-living yeast (Trichosporon cutaneum) [TaxId:
5554]}
Length = 360
Score = 29.3 bits (64), Expect = 1.3
Identities = 9/30 (30%), Positives = 17/30 (56%), Gaps = 5/30 (16%)
Query: 2 AGHNGLVSAAYLA-----RAGLSVAVLERR 26
AG GL++A L+ + L V ++++R
Sbjct: 15 AGPAGLMAARVLSEYVRQKPDLKVRIIDKR 44
>d1kdga1 c.3.1.2 (A:215-512,A:694-755) Flavoprotein domain of
flavocytochrome cellobiose dehydrogenase (CDH),
FAD-binding domain {Fungus (Phanerochaete
chrysosporium) [TaxId: 5306]}
Length = 360
Score = 29.2 bits (64), Expect = 1.3
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 2 AGHNGLVSAAYLARAGLSVAVLER 25
AG G+++A L+ AG V +LER
Sbjct: 10 AGPGGIIAADRLSEAGKKVLLLER 33
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus
solfataricus [TaxId: 2287]}
Length = 283
Score = 28.9 bits (63), Expect = 1.6
Identities = 16/135 (11%), Positives = 36/135 (26%), Gaps = 18/135 (13%)
Query: 328 FLADPNPSENTVQPHHHGSIHLNCEDMQQVFDAYQDATQGIPSTRPMIEMVLPSSLDNTL 387
+ S++ V + L + A A + + ++ L + L
Sbjct: 127 LESFEQASKDNVIIVLDEAQELVKLRGVNLLPALAYAYDNLKRIKFIMSGSEMGLLYDYL 186
Query: 388 SPPGHHVCLLFTQFTPYKLAGDRDWTEEDKANYATNVFSSIEQYCPGFTQDIVGYEILTP 447
L F+ +L + ++ E+ + F + +
Sbjct: 187 RVEDPESPLFGRAFSTVEL---KPFSREEAIEFLRRGFQEAD---------------IDF 228
Query: 448 PDLEKEFGLTGGNIF 462
D E + GG
Sbjct: 229 KDYEVVYEKIGGIPG 243
>d1lqta2 c.4.1.1 (A:2-108,A:325-456) Ferredoxin:NADP reductase
FprA {Mycobacterium tuberculosis [TaxId: 1773]}
Length = 239
Score = 28.5 bits (62), Expect = 1.6
Identities = 9/37 (24%), Positives = 16/37 (43%), Gaps = 7/37 (18%)
Query: 2 AGHNGLVSAAYLARAG-------LSVAVLERRHVLGG 31
+G + +AA L +A ++V +LE G
Sbjct: 10 SGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWG 46
>d2ejna1 a.101.1.1 (A:1-72) Allergen Fel d I-A chain {Cat (Felis
catus) [TaxId: 9685]}
Length = 72
Score = 26.7 bits (59), Expect = 1.7
Identities = 10/26 (38%), Positives = 12/26 (46%), Gaps = 3/26 (11%)
Query: 409 DRDWTEEDKANYATNVFSSIE--QYC 432
D TEEDK N A ++ I C
Sbjct: 46 DAKMTEEDKEN-ALSLLDKIYTSPLC 70
>d1feca1 c.3.1.5 (A:1-169,A:287-357) Trypanothione reductase
{Crithidia fasciculata [TaxId: 5656]}
Length = 240
Score = 28.4 bits (62), Expect = 2.1
Identities = 9/31 (29%), Positives = 13/31 (41%), Gaps = 1/31 (3%)
Query: 2 AGHNGLVSAAYLARAGL-SVAVLERRHVLGG 31
AG GL + A VAV++ + G
Sbjct: 11 AGSGGLEAGWNAASLHKKRVAVIDLQKHHGP 41
>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma
cruzi [TaxId: 5693]}
Length = 117
Score = 27.5 bits (60), Expect = 2.1
Identities = 11/54 (20%), Positives = 25/54 (46%)
Query: 227 GGMGAVSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVVTNGLEIKAKYVL 280
G + + L + A+G Q+ T + ++ L++D S +G ++ V+
Sbjct: 61 GFDHTLREELTKQLTANGIQILTKENPAKVELNADGSKSVTFESGKKMDFDLVM 114
>d2gy9i1 d.14.1.1 (I:4-129) Ribosomal protein S9 {Escherichia coli
[TaxId: 562]}
Length = 126
Score = 26.7 bits (59), Expect = 3.3
Identities = 8/15 (53%), Positives = 10/15 (66%), Gaps = 2/15 (13%)
Query: 63 ELKKHGLKLLTRDPR 77
EL+K G +TRD R
Sbjct: 93 ELRKAGF--VTRDAR 105
>d1y8oa2 d.122.1.4 (A:177-301) Pyruvate dehydrogenase kinase {Human
(Homo sapiens) [TaxId: 9606]}
Length = 125
Score = 26.8 bits (58), Expect = 3.3
Identities = 13/34 (38%), Positives = 14/34 (41%), Gaps = 4/34 (11%)
Query: 333 NPSENTVQPHHHGSIHLNCEDMQQVFDAYQDATQ 366
NP P H GSI C V DAY+ A
Sbjct: 1 NPV----HPKHIGSIDPTCNVADVVKDAYETAKM 30
>d1jm6a2 d.122.1.4 (A:1177-1366) Pyruvate dehydrogenase kinase {Rat
(Rattus norvegicus), isozyme 2 [TaxId: 10116]}
Length = 190
Score = 27.4 bits (60), Expect = 3.4
Identities = 12/24 (50%), Positives = 12/24 (50%)
Query: 341 PHHHGSIHLNCEDMQQVFDAYQDA 364
P H GSI NC V DAY A
Sbjct: 1 PKHIGSIDPNCSVSDVVKDAYDMA 24
>d1chua2 c.3.1.4 (A:2-237,A:354-422) L-aspartate oxidase
{Escherichia coli [TaxId: 562]}
Length = 305
Score = 27.6 bits (60), Expect = 3.5
Identities = 11/33 (33%), Positives = 14/33 (42%), Gaps = 1/33 (3%)
Query: 2 AGHNGLVSAAYLARAGLSVAVLERRHVLGGAAV 34
+G GL A LA V VL + V G+
Sbjct: 15 SGAAGLSLALRLADQH-QVIVLSKGPVTEGSTF 46
>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium
falciparum [TaxId: 5833]}
Length = 117
Score = 26.6 bits (58), Expect = 3.7
Identities = 11/45 (24%), Positives = 18/45 (40%)
Query: 232 VSQALARSAQASGAQLFTSQTVTEITLDSDKRASGVVTNGLEIKA 276
V L + + + T V EI SDK S +++G +
Sbjct: 65 VINVLENDMKKNNINIVTFADVVEIKKVSDKNLSIHLSDGRIYEH 109
>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase,
HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId:
3702]}
Length = 167
Score = 27.1 bits (59), Expect = 4.2
Identities = 15/124 (12%), Positives = 28/124 (22%), Gaps = 6/124 (4%)
Query: 331 DPNPSENTVQPHHHGSIHLNCEDMQQVFDAYQDATQGIPSTRPMIEMVLPSSLDNTLSPP 390
+P + V+ HH I C D V + S + + L+
Sbjct: 2 NPKSDKFKVKRFHH--IEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSG 59
Query: 391 GHHVCLLFTQFTPYKLAGDRDWTEEDKANYATNVFSSIEQYCPGFTQDIVGYEILTPPDL 450
+ T ++ S + + + D
Sbjct: 60 DLRFLFTAPYSPSLSAGEIKPTTTASIPSFDHGSCRSFFSSHGLGVRAVA----IEVEDA 115
Query: 451 EKEF 454
E F
Sbjct: 116 ESAF 119
>d1i7qa_ d.161.1.1 (A:) Anthranilate synthase
aminodeoxyisochorismate synthase/lyase subunit, TrpE
{Serratia marcescens [TaxId: 615]}
Length = 517
Score = 26.9 bits (58), Expect = 6.2
Identities = 7/22 (31%), Positives = 10/22 (45%)
Query: 499 AHPGGGVCGAPGYIAAQMVNRL 520
G + GAP A Q++ L
Sbjct: 417 CMNMGTLSGAPKVRAMQLIAAL 438
>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline
dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}
Length = 184
Score = 26.0 bits (56), Expect = 9.6
Identities = 10/25 (40%), Positives = 12/25 (48%)
Query: 2 AGHNGLVSAAYLARAGLSVAVLERR 26
G+ G AAYLA G SV +
Sbjct: 9 LGNGGHAFAAYLALKGQSVLAWDID 33
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.318 0.135 0.404
Gapped
Lambda K H
0.267 0.0415 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,944,737
Number of extensions: 91382
Number of successful extensions: 386
Number of sequences better than 10.0: 1
Number of HSP's gapped: 379
Number of HSP's successfully gapped: 72
Length of query: 523
Length of database: 2,407,596
Length adjustment: 89
Effective length of query: 434
Effective length of database: 1,185,626
Effective search space: 514561684
Effective search space used: 514561684
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)