Your job contains 1 sequence.
>psy8931
MGKLKPIDLQVATRSGNKKVTLVNNLDVYGIDLKEFCKLCQHGVAASTCINMVNNAAQVQ
VQGNQIVFVHNLLTEKFNIQKRFIRGLELAPKKKR
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy8931
(95 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0041588 - symbol:ligatin "ligatin" species:7227 "D... 184 2.2e-13 1
UNIPROTKB|F1NDA1 - symbol:EIF2D "Uncharacterized protein"... 153 5.3e-10 1
WB|WBGene00016113 - symbol:C25H3.4 species:6239 "Caenorha... 148 1.6e-09 1
UNIPROTKB|E2R801 - symbol:EIF2D "Uncharacterized protein"... 147 2.2e-09 1
UNIPROTKB|F1SEZ6 - symbol:EIF2D "Uncharacterized protein"... 141 9.9e-09 1
ZFIN|ZDB-GENE-040426-1226 - symbol:eif2d "eukaryotic tran... 140 1.3e-08 1
UNIPROTKB|G8JKW9 - symbol:EIF2D "Eukaryotic translation i... 139 1.6e-08 1
UNIPROTKB|Q58CR3 - symbol:EIF2D "Eukaryotic translation i... 139 1.6e-08 1
MGI|MGI:109342 - symbol:Eif2d "eukaryotic translation ini... 137 2.6e-08 1
UNIPROTKB|P41214 - symbol:EIF2D "Eukaryotic translation i... 134 5.6e-08 1
UNIPROTKB|Q5RA63 - symbol:EIF2D "Eukaryotic translation i... 134 5.6e-08 1
RGD|1561765 - symbol:Eif2d "eukaryotic translation initia... 133 6.9e-08 1
>FB|FBgn0041588 [details] [associations]
symbol:ligatin "ligatin" species:7227 "Drosophila
melanogaster" [GO:0006413 "translational initiation" evidence=ISS]
[GO:0003743 "translation initiation factor activity" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] InterPro:IPR001950
InterPro:IPR002478 InterPro:IPR003121 InterPro:IPR004521
Pfam:PF01253 Pfam:PF01472 PROSITE:PS50296 PROSITE:PS50890
GO:GO:0003743 InterPro:IPR015947 SUPFAM:SSF88697 SUPFAM:SSF47592
TIGRFAMs:TIGR00451 SUPFAM:SSF55159 eggNOG:COG2016 EMBL:AF186594
ProteinModelPortal:Q9GU72 SMR:Q9GU72 PaxDb:Q9GU72 PRIDE:Q9GU72
FlyBase:FBgn0041588 InParanoid:Q9GU72 OrthoDB:EOG4N5TC2
ArrayExpress:Q9GU72 Bgee:Q9GU72 Uniprot:Q9GU72
Length = 563
Score = 184 (69.8 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 44/94 (46%), Positives = 54/94 (57%)
Query: 5 KP-IDLQVATRSGNKKVTLVNNLDVYGIDLKEFCKLCQHGVAASTCXXXX--XXXXXXXX 61
KP I + +ATRSGNKKVTLV+N++ YGI L EF KLC+ G AAST
Sbjct: 466 KPLIQMSLATRSGNKKVTLVSNIEAYGIILAEFIKLCKQGAAASTSVVKLPHQKHEQLQI 525
Query: 62 XXXXXXFVHNLLTEKFNIQKRFIRGLELAPKKKR 95
FVH LLTE + + + I GLELA K+
Sbjct: 526 QGNQVRFVHTLLTETYKVPPKCILGLELAKDGKK 559
>UNIPROTKB|F1NDA1 [details] [associations]
symbol:EIF2D "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003743 "translation initiation factor activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR001950 InterPro:IPR002478 InterPro:IPR003121
Pfam:PF01253 PROSITE:PS50296 PROSITE:PS50890 GO:GO:0005737
GO:GO:0003743 InterPro:IPR015947 SUPFAM:SSF88697 SUPFAM:SSF47592
SUPFAM:SSF55159 GeneTree:ENSGT00550000074865 EMBL:AADN02044951
IPI:IPI00571985 Ensembl:ENSGALT00000001255 OMA:PLFREAN
Uniprot:F1NDA1
Length = 601
Score = 153 (58.9 bits), Expect = 5.3e-10, P = 5.3e-10
Identities = 35/97 (36%), Positives = 53/97 (54%)
Query: 2 GKLKPIDLQVATRSGNKKVTLVNNLDVYGIDLKEFCKLCQHGVAASTCXXXXXXXXXXXX 61
G ++PID+ A RS NKKVT++ NL++YG+D + + Q V AST
Sbjct: 503 GNIEPIDITTAQRSSNKKVTIIKNLELYGLDPQCVANILQQKVQASTTITPVPGAKDRVQ 562
Query: 62 XXXXXXFVHNL---LTEKFNIQKRFIRGLELAPKKKR 95
VH+L L E++ + +++I+GLE APK R
Sbjct: 563 VQIQGNQVHHLAKMLLEEYQLPRKYIQGLEKAPKLGR 599
>WB|WBGene00016113 [details] [associations]
symbol:C25H3.4 species:6239 "Caenorhabditis elegans"
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0006413 "translational initiation" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] InterPro:IPR001950 InterPro:IPR002478
InterPro:IPR004521 Pfam:PF01253 PROSITE:PS50296 PROSITE:PS50890
GO:GO:0003743 InterPro:IPR015947 SUPFAM:SSF88697 TIGRFAMs:TIGR00451
SUPFAM:SSF55159 eggNOG:NOG246264 OMA:EKNEQHT
GeneTree:ENSGT00550000074865 EMBL:FO080601 RefSeq:NP_495114.3
ProteinModelPortal:Q18186 SMR:Q18186 PaxDb:Q18186
EnsemblMetazoa:C25H3.4.1 EnsemblMetazoa:C25H3.4.2 GeneID:173964
KEGG:cel:CELE_C25H3.4 UCSC:C25H3.4 CTD:173964 WormBase:C25H3.4
HOGENOM:HOG000017014 InParanoid:Q18186 NextBio:881875
Uniprot:Q18186
Length = 549
Score = 148 (57.2 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 34/98 (34%), Positives = 53/98 (54%)
Query: 3 KLKP--IDLQVATRSGNKKVTLVNNLDVYGIDLKEFCKLCQHGVAASTCXXXXXXXXXXX 60
K+ P ++ ++ R+GNKKVTL+N L ++GID++ C Q GVA S
Sbjct: 452 KVSPPRVEFKIENRAGNKKVTLLNGLAMFGIDIRTICHQIQTGVATSVTSQWEVPGVEGP 511
Query: 61 XXXXXXXFVH---NLLTEKFNIQKRFIRGLELAPKKKR 95
+H +LL + + I K+F++G ELA KKK+
Sbjct: 512 QVLVQGNQIHFIADLLIKSYGIDKKFMKGTELAVKKKK 549
>UNIPROTKB|E2R801 [details] [associations]
symbol:EIF2D "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003743 "translation initiation factor
activity" evidence=IEA] InterPro:IPR001950 InterPro:IPR002478
InterPro:IPR003121 Pfam:PF01253 PROSITE:PS50296 PROSITE:PS50890
SMART:SM00359 GO:GO:0003743 InterPro:IPR015947 SUPFAM:SSF88697
SUPFAM:SSF47592 SUPFAM:SSF55159 CTD:1939 KO:K15027 OMA:EKNEQHT
GeneTree:ENSGT00550000074865 EMBL:AAEX03018271
RefSeq:NP_001189417.1 Ensembl:ENSCAFT00000016297
Ensembl:ENSCAFT00000038953 GeneID:478951 KEGG:cfa:478951
NextBio:20854211 Uniprot:E2R801
Length = 584
Score = 147 (56.8 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 36/99 (36%), Positives = 53/99 (53%)
Query: 2 GKLKPIDLQVATRSGNKKVTLVNNLDVYGIDLKEFCKLCQHGVAASTCXXXXXXXXXXXX 61
GK+ PID+ +A R+ NKKVT+V NL+ YG+D + Q AST
Sbjct: 486 GKICPIDISLAQRASNKKVTVVRNLEPYGLDPCSVASILQQRCQASTTVTPAPGAKDSLQ 545
Query: 62 XXXXXXFVHNL---LTEKFNIQKRFIRGLELAPK--KKR 95
VH+L L E++ + +++I+GLE APK KK+
Sbjct: 546 VQIQGNQVHHLSRLLLEEYRLPRKYIQGLEKAPKPAKKK 584
>UNIPROTKB|F1SEZ6 [details] [associations]
symbol:EIF2D "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003743
"translation initiation factor activity" evidence=IEA]
InterPro:IPR001950 InterPro:IPR002478 InterPro:IPR003121
Pfam:PF01253 PROSITE:PS50296 PROSITE:PS50890 SMART:SM00359
GO:GO:0005737 GO:GO:0003743 InterPro:IPR015947 SUPFAM:SSF88697
SUPFAM:SSF47592 SUPFAM:SSF55159 CTD:1939 KO:K15027 OMA:EKNEQHT
GeneTree:ENSGT00550000074865 EMBL:CU633844 RefSeq:XP_003482708.1
UniGene:Ssc.37239 Ensembl:ENSSSCT00000017045 GeneID:100519862
KEGG:ssc:100519862 Uniprot:F1SEZ6
Length = 585
Score = 141 (54.7 bits), Expect = 9.9e-09, P = 9.9e-09
Identities = 34/99 (34%), Positives = 52/99 (52%)
Query: 2 GKLKPIDLQVATRSGNKKVTLVNNLDVYGIDLKEFCKLCQHGVAASTCXXXXXXXXXXXX 61
GK+ PID+ +A R+ NKKVT+V NL+ YG+D + Q AST
Sbjct: 487 GKICPIDITLAQRASNKKVTVVRNLEAYGLDPYSVAAILQQRCQASTTVTPAPGAKDSLQ 546
Query: 62 XXXXXXFVHNL---LTEKFNIQKRFIRGLELAPK--KKR 95
VH+L L +++ + +++I+GLE PK KK+
Sbjct: 547 VQIQGNQVHHLGRLLLDEYQLPRKYIQGLEKVPKPGKKK 585
>ZFIN|ZDB-GENE-040426-1226 [details] [associations]
symbol:eif2d "eukaryotic translation initiation
factor 2D" species:7955 "Danio rerio" [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0006413 "translational initiation" evidence=IEA]
InterPro:IPR001950 InterPro:IPR002478 InterPro:IPR003121
InterPro:IPR004521 Pfam:PF01253 Pfam:PF01472 PROSITE:PS50296
PROSITE:PS50890 SMART:SM00359 ZFIN:ZDB-GENE-040426-1226
GO:GO:0003743 InterPro:IPR015947 SUPFAM:SSF88697 SUPFAM:SSF47592
TIGRFAMs:TIGR00451 SUPFAM:SSF55159 CTD:1939 HOVERGEN:HBG006268
KO:K15027 EMBL:BC055196 IPI:IPI00492109 RefSeq:NP_957456.1
UniGene:Dr.17703 ProteinModelPortal:Q7SXY6 STRING:Q7SXY6
PRIDE:Q7SXY6 GeneID:394137 KEGG:dre:394137 InParanoid:Q7SXY6
NextBio:20815088 ArrayExpress:Q7SXY6 Bgee:Q7SXY6 Uniprot:Q7SXY6
Length = 590
Score = 140 (54.3 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 32/99 (32%), Positives = 53/99 (53%)
Query: 2 GKLKPIDLQVATRSGNKKVTLVNNLDVYGIDLKEFCKLCQHGVAASTCXXX---XXXXXX 58
G+++PID+ VA+R NKKVT++ NL+ +G+D + QH V AS
Sbjct: 492 GQMEPIDISVASRGSNKKVTVIKNLEAFGLDPATVAEALQHQVQASCVLHDCPGAKNRVL 551
Query: 59 XXXXXXXXXFVHNLLTEKFNIQKRFIRGLELAPK--KKR 95
V LL +++ I +++++GL+ APK KK+
Sbjct: 552 VQIQGNQVQHVGKLLLDRYQIPRKYVQGLDKAPKPGKKK 590
>UNIPROTKB|G8JKW9 [details] [associations]
symbol:EIF2D "Eukaryotic translation initiation factor 2D"
species:9913 "Bos taurus" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
InterPro:IPR001950 InterPro:IPR002478 InterPro:IPR003121
Pfam:PF01253 PROSITE:PS50296 PROSITE:PS50890 SMART:SM00359
GO:GO:0005737 GO:GO:0003743 InterPro:IPR015947 SUPFAM:SSF88697
SUPFAM:SSF47592 SUPFAM:SSF55159 OMA:EKNEQHT
GeneTree:ENSGT00550000074865 EMBL:DAAA02041966
Ensembl:ENSBTAT00000013769 Uniprot:G8JKW9
Length = 578
Score = 139 (54.0 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 33/99 (33%), Positives = 52/99 (52%)
Query: 2 GKLKPIDLQVATRSGNKKVTLVNNLDVYGIDLKEFCKLCQHGVAASTCXXXXXXXXXXXX 61
G++ PID+ +A ++ NKKVT+V NL+ YG+D + Q AST
Sbjct: 480 GRICPIDITLAQKASNKKVTVVRNLEAYGLDPRSVAATLQQRCQASTTVTSAPGLKDSVQ 539
Query: 62 XXXXXXFVHNL---LTEKFNIQKRFIRGLELAPK--KKR 95
+H+L L E++ + ++ I+GLE APK KK+
Sbjct: 540 VQIQGNQIHHLGRLLLEEYRLPRKHIQGLEKAPKPGKKK 578
>UNIPROTKB|Q58CR3 [details] [associations]
symbol:EIF2D "Eukaryotic translation initiation factor 2D"
species:9913 "Bos taurus" [GO:0003743 "translation initiation
factor activity" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] InterPro:IPR001950 InterPro:IPR002478
InterPro:IPR003121 Pfam:PF01253 PROSITE:PS50296 PROSITE:PS50890
SMART:SM00359 GO:GO:0005737 GO:GO:0003743 InterPro:IPR015947
SUPFAM:SSF88697 SUPFAM:SSF47592 SUPFAM:SSF55159 EMBL:BT021884
EMBL:BC114158 IPI:IPI00713072 RefSeq:NP_001030276.1
UniGene:Bt.59019 ProteinModelPortal:Q58CR3 GeneID:511844
KEGG:bta:511844 CTD:1939 eggNOG:NOG246264 HOVERGEN:HBG006268
InParanoid:Q58CR3 KO:K15027 OrthoDB:EOG41NTKN NextBio:20870126
Uniprot:Q58CR3
Length = 579
Score = 139 (54.0 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 33/99 (33%), Positives = 52/99 (52%)
Query: 2 GKLKPIDLQVATRSGNKKVTLVNNLDVYGIDLKEFCKLCQHGVAASTCXXXXXXXXXXXX 61
G++ PID+ +A ++ NKKVT+V NL+ YG+D + Q AST
Sbjct: 481 GRICPIDITLAQKASNKKVTVVRNLEAYGLDPRSVAATLQQRCQASTTVTSAPGLKDSVQ 540
Query: 62 XXXXXXFVHNL---LTEKFNIQKRFIRGLELAPK--KKR 95
+H+L L E++ + ++ I+GLE APK KK+
Sbjct: 541 VQIQGNQIHHLGRLLLEEYRLPRKHIQGLEKAPKPGKKK 579
>MGI|MGI:109342 [details] [associations]
symbol:Eif2d "eukaryotic translation initiation factor 2D"
species:10090 "Mus musculus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003743 "translation initiation factor activity"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0006412
"translation" evidence=IEA] [GO:0006413 "translational initiation"
evidence=IEA] InterPro:IPR001950 InterPro:IPR002478
InterPro:IPR003121 Pfam:PF01253 PROSITE:PS50296 PROSITE:PS50890
SMART:SM00359 MGI:MGI:109342 GO:GO:0005737 GO:GO:0003743
InterPro:IPR015947 SUPFAM:SSF88697 SUPFAM:SSF47592 SUPFAM:SSF55159
CTD:1939 eggNOG:NOG246264 HOVERGEN:HBG006268 KO:K15027 OMA:EKNEQHT
EMBL:AK034115 EMBL:AK036154 EMBL:AK046539 EMBL:AK082748
EMBL:AK083638 EMBL:AK139052 EMBL:AK161269 EMBL:AK167980
EMBL:AK168120 EMBL:AK170252 EMBL:AK170448 EMBL:AK171115
EMBL:BC024501 EMBL:BC025036 EMBL:U58337 IPI:IPI00153773
IPI:IPI00348910 RefSeq:NP_001129542.1 RefSeq:NP_034839.2
UniGene:Mm.276294 ProteinModelPortal:Q61211 SMR:Q61211
STRING:Q61211 PhosphoSite:Q61211 PaxDb:Q61211 PRIDE:Q61211
Ensembl:ENSMUST00000068805 GeneID:16865 KEGG:mmu:16865
UCSC:uc007cmy.2 UCSC:uc007cmz.2 GeneTree:ENSGT00550000074865
NextBio:290818 PMAP-CutDB:Q61211 Bgee:Q61211 CleanEx:MM_LGTN
Genevestigator:Q61211 GermOnline:ENSMUSG00000026427 Uniprot:Q61211
Length = 570
Score = 137 (53.3 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 33/94 (35%), Positives = 49/94 (52%)
Query: 2 GKLKPIDLQVATRSGNKKVTLVNNLDVYGIDLKEFCKLCQHGVAASTCXXXXXXXXXXXX 61
GKL PID+ +A ++ NKKVT+V NL+ YG+D + Q AST
Sbjct: 473 GKLCPIDITLALKTYNKKVTVVRNLETYGLDPCSVAAILQQRCQASTIVSPAPGAKDSLQ 532
Query: 62 XXXXXXFVHNL---LTEKFNIQKRFIRGLELAPK 92
+H+L L E++ + ++I+GLE APK
Sbjct: 533 VQVQGNQIHHLGQLLLEEYRLPGKYIQGLEKAPK 566
>UNIPROTKB|P41214 [details] [associations]
symbol:EIF2D "Eukaryotic translation initiation factor 2D"
species:9606 "Homo sapiens" [GO:0003743 "translation initiation
factor activity" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0004872 "receptor activity" evidence=TAS]
[GO:0006886 "intracellular protein transport" evidence=TAS]
InterPro:IPR001950 InterPro:IPR002478 InterPro:IPR003121
Pfam:PF01253 PROSITE:PS50296 PROSITE:PS50890 SMART:SM00359
GO:GO:0005737 GO:GO:0006886 EMBL:CH471100 GO:GO:0004872
GO:GO:0003743 InterPro:IPR015947 SUPFAM:SSF88697 SUPFAM:SSF47592
SUPFAM:SSF55159 EMBL:AL591846 CTD:1939 HOVERGEN:HBG006268 KO:K15027
OrthoDB:EOG41NTKN EMBL:AF220417 EMBL:AF262403 EMBL:AK001852
EMBL:BC001585 EMBL:BC039134 EMBL:BC058905 EMBL:AL162001
EMBL:AF159586 IPI:IPI00013160 IPI:IPI00183443 PIR:A60697 PIR:T47178
RefSeq:NP_001188407.1 RefSeq:NP_008824.2 UniGene:Hs.497581
ProteinModelPortal:P41214 SMR:P41214 STRING:P41214
PhosphoSite:P41214 DMDM:158957575 PaxDb:P41214 PRIDE:P41214
DNASU:1939 Ensembl:ENST00000271764 Ensembl:ENST00000367114
Ensembl:ENST00000580424 Ensembl:ENST00000585127 GeneID:1939
KEGG:hsa:1939 UCSC:uc001heh.2 UCSC:uc009xbw.2 GeneCards:GC01M206745
HGNC:HGNC:6583 HPA:HPA028220 MIM:613709 neXtProt:NX_P41214
PharmGKB:PA30355 eggNOG:COG2016 InParanoid:P41214 OMA:EKNEQHT
PhylomeDB:P41214 ChiTaRS:EIF2D GenomeRNAi:1939 NextBio:7857
ArrayExpress:P41214 Bgee:P41214 Genevestigator:P41214
GermOnline:ENSG00000143486 Uniprot:P41214
Length = 584
Score = 134 (52.2 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 34/99 (34%), Positives = 51/99 (51%)
Query: 2 GKLKPIDLQVATRSGNKKVTLVNNLDVYGIDLKEFCKLCQHGVAASTCXXXXXXXXXXXX 61
G++ PID+ +A R+ NKKVT+V NL+ YG+D + Q AST
Sbjct: 486 GRICPIDITLAQRASNKKVTVVRNLEAYGLDPYSVAAILQQRCQASTTVNPAPGAKDSLQ 545
Query: 62 XXXXXXFVHNL---LTEKFNIQKRFIRGLE--LAPKKKR 95
VH+L L E++ + ++ I+GLE L P KK+
Sbjct: 546 VQIQGNQVHHLGWLLLEEYQLPRKHIQGLEKALKPGKKK 584
>UNIPROTKB|Q5RA63 [details] [associations]
symbol:EIF2D "Eukaryotic translation initiation factor 2D"
species:9601 "Pongo abelii" [GO:0003743 "translation initiation
factor activity" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] InterPro:IPR001950 InterPro:IPR002478
InterPro:IPR003121 Pfam:PF01253 PROSITE:PS50296 PROSITE:PS50890
SMART:SM00359 GO:GO:0005737 GO:GO:0003743 InterPro:IPR015947
SUPFAM:SSF88697 SUPFAM:SSF47592 SUPFAM:SSF55159 CTD:1939
HOVERGEN:HBG006268 KO:K15027 EMBL:CR859158 RefSeq:NP_001125796.1
UniGene:Pab.6349 ProteinModelPortal:Q5RA63 PRIDE:Q5RA63
GeneID:100172724 KEGG:pon:100172724 InParanoid:Q5RA63
Uniprot:Q5RA63
Length = 584
Score = 134 (52.2 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 34/99 (34%), Positives = 51/99 (51%)
Query: 2 GKLKPIDLQVATRSGNKKVTLVNNLDVYGIDLKEFCKLCQHGVAASTCXXXXXXXXXXXX 61
G++ PID+ +A R+ NKKVT+V NL+ YG+D + Q AST
Sbjct: 486 GRICPIDITLAQRASNKKVTVVRNLEAYGLDPYSVAAILQQRCQASTTVNPAPGAKDSLQ 545
Query: 62 XXXXXXFVHNL---LTEKFNIQKRFIRGLE--LAPKKKR 95
VH+L L E++ + ++ I+GLE L P KK+
Sbjct: 546 VQIQGNQVHHLGWLLLEEYQLPRKHIQGLEKALKPGKKK 584
>RGD|1561765 [details] [associations]
symbol:Eif2d "eukaryotic translation initiation factor 2D"
species:10116 "Rattus norvegicus" [GO:0003743 "translation
initiation factor activity" evidence=IEA;ISO;ISS] [GO:0005737
"cytoplasm" evidence=ISO;ISS] InterPro:IPR001950 InterPro:IPR002478
InterPro:IPR003121 Pfam:PF01253 PROSITE:PS50296 PROSITE:PS50890
SMART:SM00359 RGD:1561765 GO:GO:0005737 GO:GO:0003743
InterPro:IPR015947 SUPFAM:SSF88697 SUPFAM:SSF47592 SUPFAM:SSF55159
CTD:1939 eggNOG:NOG246264 HOVERGEN:HBG006268 KO:K15027
OrthoDB:EOG41NTKN GeneTree:ENSGT00550000074865 EMBL:BC087701
IPI:IPI00367056 RefSeq:NP_001017489.1 UniGene:Rn.162387
ProteinModelPortal:Q5PPG7 PRIDE:Q5PPG7 Ensembl:ENSRNOT00000006768
GeneID:498225 KEGG:rno:498225 UCSC:RGD:1561765 NextBio:699079
ArrayExpress:Q5PPG7 Genevestigator:Q5PPG7
GermOnline:ENSRNOG00000004910 Uniprot:Q5PPG7
Length = 570
Score = 133 (51.9 bits), Expect = 6.9e-08, P = 6.9e-08
Identities = 32/94 (34%), Positives = 48/94 (51%)
Query: 2 GKLKPIDLQVATRSGNKKVTLVNNLDVYGIDLKEFCKLCQHGVAASTCXXXXXXXXXXXX 61
GKL PID+ + ++ NKKVT+V NL+ YG+D + Q AST
Sbjct: 473 GKLCPIDITLVLKTYNKKVTVVRNLETYGLDPCSVAAILQQRCQASTIVSPAPGAKDSLQ 532
Query: 62 XXXXXXFVHNL---LTEKFNIQKRFIRGLELAPK 92
+H+L L E++ + ++I+GLE APK
Sbjct: 533 VQVQGNQIHHLGQLLLEEYRLPGKYIQGLEKAPK 566
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.139 0.410 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 95 77 0.00091 102 3 11 22 0.49 28
29 0.50 29
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 12
No. of states in DFA: 500 (53 KB)
Total size of DFA: 89 KB (2066 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 7.89u 0.08s 7.97t Elapsed: 00:00:05
Total cpu time: 7.89u 0.08s 7.97t Elapsed: 00:00:05
Start: Thu Aug 15 13:48:37 2013 End: Thu Aug 15 13:48:42 2013