Query psy8934
Match_columns 129
No_of_seqs 98 out of 113
Neff 4.1
Searched_HMMs 13730
Date Fri Aug 16 23:11:57 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8934.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/8934hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2ik8b1 a.91.1.1 (B:65-180) Re 29.7 15 0.0011 22.6 2.4 24 61-84 11-34 (116)
2 d2jm5a1 a.91.1.1 (A:3-134) Reg 20.5 33 0.0024 21.5 2.7 25 60-84 21-45 (132)
3 d2aeea1 c.61.1.1 (A:1-208) Oro 19.2 23 0.0017 25.1 1.8 26 12-37 3-33 (208)
4 d1agre_ a.91.1.1 (E:) Regulato 18.4 40 0.0029 21.1 2.8 24 61-84 22-45 (128)
5 d1dk8a_ a.91.1.1 (A:) Axin RGS 14.1 48 0.0035 21.1 2.3 25 60-84 24-48 (147)
6 d1cmza_ a.91.1.1 (A:) Galpha i 13.9 54 0.0039 20.4 2.5 25 60-84 21-45 (128)
7 d1fqia_ a.91.1.1 (A:) RGS9, RG 13.9 58 0.0042 20.6 2.7 25 60-84 26-50 (138)
8 d1rtya_ a.25.2.2 (A:) Putative 10.4 46 0.0033 22.7 1.3 21 7-27 122-142 (161)
9 d2hkja2 d.14.1.3 (A:307-470) T 10.0 6.9 0.0005 28.2 -3.4 53 4-56 3-55 (164)
10 d1mxaa1 d.130.1.1 (A:1-102) S- 9.5 34 0.0025 22.1 0.3 20 33-52 9-28 (102)
No 1
>d2ik8b1 a.91.1.1 (B:65-180) Regulator of G-protein signaling 16, RGS16 {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.68 E-value=15 Score=22.62 Aligned_cols=24 Identities=25% Similarity=0.364 Sum_probs=21.1
Q ss_pred chhHHHHHHHhccCchhHHHHHHH
Q psy8934 61 QDNLFINYLSRIHRDEDFQFVLAG 84 (129)
Q Consensus 61 ~~N~FR~yLsrLHR~eDf~FIl~g 84 (129)
..+.|+.||.+-|..+.++|.++.
T Consensus 11 ~~~~F~~FL~~~~~~e~L~Fw~~v 34 (116)
T d2ik8b1 11 GVAAFHAFLKTEFSEENLEFWLAC 34 (116)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHhHhcCHHHHHHHHHH
Confidence 457899999999999999998764
No 2
>d2jm5a1 a.91.1.1 (A:3-134) Regulator of G-protein signaling 18, RGS18 {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.47 E-value=33 Score=21.51 Aligned_cols=25 Identities=20% Similarity=0.351 Sum_probs=21.2
Q ss_pred CchhHHHHHHHhccCchhHHHHHHH
Q psy8934 60 TQDNLFINYLSRIHRDEDFQFVLAG 84 (129)
Q Consensus 60 ~~~N~FR~yLsrLHR~eDf~FIl~g 84 (129)
....+|+.||.+-|..+.++|..+.
T Consensus 21 ~~~~~F~~fl~~~~~~e~l~Fw~~v 45 (132)
T d2jm5a1 21 DGLEAFTRFLKTEFSEENIEFWIAC 45 (132)
T ss_dssp HHHHHHHHHHHHTTCTTTHHHHHHH
T ss_pred HHHHHHHHHHhHcCCHHHHHHHHHH
Confidence 3467999999999999999998654
No 3
>d2aeea1 c.61.1.1 (A:1-208) Orotate PRTase {Streptococcus pyogenes [TaxId: 1314]}
Probab=19.19 E-value=23 Score=25.10 Aligned_cols=26 Identities=35% Similarity=0.465 Sum_probs=20.5
Q ss_pred hHHHHHHHHHh---hccCCC--cccccCccc
Q psy8934 12 LAQSLLNAICD---LLFCPD--FTVASNKKF 37 (129)
Q Consensus 12 la~~l~~~l~d---llf~~~--~t~~~~~~~ 37 (129)
+|+++...|.| +.|+|+ ||++|-+++
T Consensus 3 ~~~~~~~~L~~~~ai~~~~~g~F~L~SG~~S 33 (208)
T d2aeea1 3 LASQIATQLLDIKAVYLKPEDPFTWASGIKS 33 (208)
T ss_dssp HHHHHHHHHHHTTSEEECTTSCEECGGGCEE
T ss_pred hHHHHHHHHHHcCCEEeCCCCCeEeCccCCC
Confidence 57777777777 578877 999998765
No 4
>d1agre_ a.91.1.1 (E:) Regulator of G-protein signaling 4, RGS4 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=18.44 E-value=40 Score=21.10 Aligned_cols=24 Identities=17% Similarity=0.261 Sum_probs=21.0
Q ss_pred chhHHHHHHHhccCchhHHHHHHH
Q psy8934 61 QDNLFINYLSRIHRDEDFQFVLAG 84 (129)
Q Consensus 61 ~~N~FR~yLsrLHR~eDf~FIl~g 84 (129)
...+|+.||.+.|..+.++|.++.
T Consensus 22 ~~~~F~~FL~~~~~~e~l~Fw~~v 45 (128)
T d1agre_ 22 GLAAFKAFLKSEYSEENIDFWISC 45 (128)
T ss_dssp HHHHHHHHHHHTTCTHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHH
Confidence 457899999999999999998764
No 5
>d1dk8a_ a.91.1.1 (A:) Axin RGS-homologous domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=14.13 E-value=48 Score=21.12 Aligned_cols=25 Identities=20% Similarity=0.238 Sum_probs=21.3
Q ss_pred CchhHHHHHHHhccCchhHHHHHHH
Q psy8934 60 TQDNLFINYLSRIHRDEDFQFVLAG 84 (129)
Q Consensus 60 ~~~N~FR~yLsrLHR~eDf~FIl~g 84 (129)
....+|+.||.+-|..+-++|-++.
T Consensus 24 ~~~~~F~~FL~~~~~~e~l~Fwl~v 48 (147)
T d1dk8a_ 24 DGISLFRTFLKQEGCADLLDFWFAC 48 (147)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 3567999999999999999998753
No 6
>d1cmza_ a.91.1.1 (A:) Galpha interacting protein, GaIP {Human (Homo sapiens) [TaxId: 9606]}
Probab=13.93 E-value=54 Score=20.37 Aligned_cols=25 Identities=24% Similarity=0.364 Sum_probs=21.2
Q ss_pred CchhHHHHHHHhccCchhHHHHHHH
Q psy8934 60 TQDNLFINYLSRIHRDEDFQFVLAG 84 (129)
Q Consensus 60 ~~~N~FR~yLsrLHR~eDf~FIl~g 84 (129)
....+|+.||.+-|..+-++|.++.
T Consensus 21 ~~~~~F~~fL~~~~~~e~l~Fw~~v 45 (128)
T d1cmza_ 21 AGRSVFRAFLRTEYSEENMLFWLAC 45 (128)
T ss_dssp HHHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 3567899999999999999998764
No 7
>d1fqia_ a.91.1.1 (A:) RGS9, RGS domain {Cow (Bos taurus) [TaxId: 9913]}
Probab=13.90 E-value=58 Score=20.60 Aligned_cols=25 Identities=20% Similarity=0.284 Sum_probs=21.2
Q ss_pred CchhHHHHHHHhccCchhHHHHHHH
Q psy8934 60 TQDNLFINYLSRIHRDEDFQFVLAG 84 (129)
Q Consensus 60 ~~~N~FR~yLsrLHR~eDf~FIl~g 84 (129)
...-+|+.||.+-|..+-++|.++.
T Consensus 26 ~~~~~F~~FL~~~~~~e~l~Fw~~v 50 (138)
T d1fqia_ 26 KGRQSFQHFLRKEFSGENLGFWEAC 50 (138)
T ss_dssp HHHHHHHHHHHHTTCTHHHHHHHHH
T ss_pred HHHHHHHHHHhHcCCHHHHHHHHHH
Confidence 3456899999999999999998754
No 8
>d1rtya_ a.25.2.2 (A:) Putative ATP-binding cobalamin adenosyltransferase YvqK {Bacillus subtilis [TaxId: 1423]}
Probab=10.36 E-value=46 Score=22.72 Aligned_cols=21 Identities=24% Similarity=0.273 Sum_probs=16.6
Q ss_pred ccccchHHHHHHHHHhhccCC
Q psy8934 7 VESVPLAQSLLNAICDLLFCP 27 (129)
Q Consensus 7 ~~~~pla~~l~~~l~dllf~~ 27 (129)
++..|.+-.-+|-|+|+||.-
T Consensus 122 ~~v~~~~~~YlNRLSD~lFvl 142 (161)
T d1rtya_ 122 EEIHETVLRYLNRLSDYFFAG 142 (161)
T ss_dssp SCCCHHHHHHHHHHHHHHHHH
T ss_pred cCCchHHHHHHHHHHHHHHHH
Confidence 345577888999999999863
No 9
>d2hkja2 d.14.1.3 (A:307-470) Topoisomerase VI-B subunit {Archaeon Sulfolobus shibatae [TaxId: 2286]}
Probab=10.04 E-value=6.9 Score=28.17 Aligned_cols=53 Identities=19% Similarity=0.364 Sum_probs=36.0
Q ss_pred cccccccchHHHHHHHHHhhccCCCcccccCcccCcchhhHHHHHhhhccccC
Q psy8934 4 AEDVESVPLAQSLLNAICDLLFCPDFTVASNKKFNSRKKMDYILNCTLSFGGL 56 (129)
Q Consensus 4 ~~~~~~~pla~~l~~~l~dllf~~~~t~~~~~~~~~~~~~~~i~~~~v~~~~~ 56 (129)
|..+-..|+-|++|..=+-=.|=|||.-...++...-...-.|+|+||+|++.
T Consensus 3 P~t~cLsPiGe~~l~~Gl~k~~~peF~a~~tR~p~vy~G~PF~VEvgiayGG~ 55 (164)
T d2hkja2 3 PSADSLSVIGEDLIELGLKKIFNPDFAASITRKPKAYQGHPFIVEAGVAFGGS 55 (164)
T ss_dssp CCGGGCCCCCHHHHHHHHHHHHCCSEEEEEECCCEEETTEEEEEEEEEEESTT
T ss_pred CCCCccCccCHHHHHHHHHHhcCcceEEEeccCCceecCCCEEEEEeeeecCC
Confidence 44455779999999888777788888544443221111223899999999977
No 10
>d1mxaa1 d.130.1.1 (A:1-102) S-adenosylmethionine synthetase {Escherichia coli [TaxId: 562]}
Probab=9.54 E-value=34 Score=22.13 Aligned_cols=20 Identities=25% Similarity=0.167 Sum_probs=13.3
Q ss_pred cCcccCcchhhHHHHHhhhc
Q psy8934 33 SNKKFNSRKKMDYILNCTLS 52 (129)
Q Consensus 33 ~~~~~~~~~~~~~i~~~~v~ 52 (129)
+--.|||||.|++|=-+-|-
T Consensus 9 sVs~GHPDKicDqISDaIlD 28 (102)
T d1mxaa1 9 SVSEGHPDKIADQISDAVLD 28 (102)
T ss_dssp EECTTSHHHHHHHHHHHHHH
T ss_pred ccCCCCCcHHHHHHHHHHHH
Confidence 33468999988876554443
Done!