Query psy8942
Match_columns 340
No_of_seqs 201 out of 1395
Neff 6.6
Searched_HMMs 29240
Date Fri Aug 16 23:22:19 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8942.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/8942hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3v8e_A Nicotinamidase; hydrola 100.0 8.4E-44 2.9E-48 325.0 15.7 206 36-255 1-215 (216)
2 2wt9_A Nicotinamidase; hydrola 100.0 4.3E-43 1.5E-47 323.8 18.9 207 33-263 27-235 (235)
3 3r2j_A Alpha/beta-hydrolase-li 100.0 1.7E-43 5.8E-48 325.4 14.1 196 30-264 28-225 (227)
4 3hb7_A Isochorismatase hydrola 100.0 2.9E-41 9.8E-46 305.4 19.2 181 32-267 3-190 (204)
5 3gbc_A Pyrazinamidase/nicotina 100.0 1.8E-40 6.2E-45 296.2 16.0 181 36-256 1-185 (186)
6 3eef_A N-carbamoylsarcosine am 100.0 4.7E-41 1.6E-45 298.5 9.9 177 35-268 1-180 (182)
7 1im5_A 180AA long hypothetical 100.0 1.3E-39 4.6E-44 288.3 19.2 175 35-255 2-179 (180)
8 3tg2_A Vibriobactin-specific i 100.0 9.9E-40 3.4E-44 299.5 16.0 187 31-269 23-211 (223)
9 3hu5_A Isochorismatase family 100.0 4.6E-39 1.6E-43 290.8 18.3 187 31-267 3-197 (204)
10 3o94_A Nicotinamidase; hydrola 100.0 4.5E-39 1.5E-43 292.9 15.7 177 31-257 17-205 (211)
11 3irv_A Cysteine hydrolase; str 100.0 5.2E-39 1.8E-43 296.4 15.8 186 31-266 17-220 (233)
12 3lqy_A Putative isochorismatas 100.0 1E-38 3.6E-43 285.4 17.0 172 32-263 3-190 (190)
13 1j2r_A Hypothetical isochorism 100.0 6.1E-38 2.1E-42 281.7 17.3 185 30-263 13-199 (199)
14 3kl2_A Putative isochorismatas 100.0 5.8E-39 2E-43 294.8 10.2 199 30-266 19-221 (226)
15 1nf9_A Phenazine biosynthesis 100.0 2.9E-38 9.8E-43 285.8 12.6 179 31-260 26-206 (207)
16 3txy_A Isochorismatase family 100.0 1E-37 3.6E-42 281.0 16.0 187 30-266 8-196 (199)
17 3mcw_A Putative hydrolase; iso 100.0 8.2E-38 2.8E-42 281.5 15.1 176 31-267 7-195 (198)
18 3oqp_A Putative isochorismatas 100.0 3.3E-37 1.1E-41 280.5 19.1 176 33-267 3-190 (211)
19 3ot4_A Putative isochorismatas 100.0 1.1E-37 3.9E-42 288.1 15.7 192 26-266 33-229 (236)
20 1yac_A Ycacgp, YCAC gene produ 100.0 6.2E-37 2.1E-41 277.9 19.4 198 30-301 6-206 (208)
21 4h17_A Hydrolase, isochorismat 100.0 3.5E-37 1.2E-41 277.4 16.2 170 29-260 16-197 (197)
22 1nba_A N-carbamoylsarcosine am 100.0 7.6E-37 2.6E-41 286.9 17.8 190 33-268 41-236 (264)
23 2fq1_A Isochorismatase; ENTB, 100.0 3E-38 1E-42 299.2 7.8 210 31-294 27-242 (287)
24 2a67_A Isochorismatase family 100.0 1.2E-34 4E-39 254.1 16.5 158 34-256 2-167 (167)
25 2b34_A F35G2.2, MAR1 ribonucle 100.0 9.2E-35 3.2E-39 262.0 15.2 183 30-291 8-193 (199)
26 1yzv_A Hypothetical protein; s 100.0 2.1E-34 7.1E-39 260.8 14.9 178 29-282 13-198 (204)
27 1x9g_A Putative MAR1; structur 100.0 2.4E-33 8.1E-38 253.1 17.1 166 30-273 14-186 (200)
28 3h7i_A Ribonuclease H, RNAse H 50.7 9.2 0.00032 35.9 3.1 44 185-228 110-153 (305)
29 1j0a_A 1-aminocyclopropane-1-c 48.5 55 0.0019 30.0 8.2 59 191-254 65-123 (325)
30 1f2d_A 1-aminocyclopropane-1-c 47.7 30 0.001 32.1 6.2 66 190-255 61-131 (341)
31 2f06_A Conserved hypothetical 46.0 39 0.0013 27.0 5.9 76 185-260 56-142 (144)
32 3uqz_A DNA processing protein 45.8 52 0.0018 30.4 7.4 64 197-264 217-281 (288)
33 3ibt_A 1H-3-hydroxy-4-oxoquino 39.3 74 0.0025 26.4 7.0 49 184-232 74-123 (264)
34 1byr_A Protein (endonuclease); 37.9 1.4E+02 0.0049 23.4 8.2 67 186-254 18-85 (155)
35 3szu_A ISPH, 4-hydroxy-3-methy 36.4 2.7E+02 0.0094 26.1 14.1 91 146-264 65-166 (328)
36 1tzj_A ACC deaminase, 1-aminoc 36.3 57 0.0019 30.0 6.2 65 191-255 62-128 (338)
37 4d9b_A D-cysteine desulfhydras 36.1 1.2E+02 0.0043 27.9 8.5 65 191-256 76-143 (342)
38 3o38_A Short chain dehydrogena 30.2 1.2E+02 0.004 26.3 6.9 60 184-248 36-97 (266)
39 3u9l_A 3-oxoacyl-[acyl-carrier 29.1 1.1E+02 0.0039 27.8 6.9 41 197-238 6-46 (324)
40 2o8r_A Polyphosphate kinase; s 27.7 66 0.0023 33.5 5.4 49 206-254 382-430 (705)
41 1vp8_A Hypothetical protein AF 27.2 1.5E+02 0.005 26.0 6.6 69 189-260 37-108 (201)
42 3bfj_A 1,3-propanediol oxidore 26.6 2.3E+02 0.0079 26.5 8.8 79 185-263 22-114 (387)
43 2yfk_A Aspartate/ornithine car 25.5 2.9E+02 0.01 26.7 9.3 79 186-264 172-262 (418)
44 1exn_A 5'-exonuclease, 5'-nucl 25.3 34 0.0012 31.7 2.4 45 185-229 105-151 (290)
45 1qwg_A PSL synthase;, (2R)-pho 24.8 1.1E+02 0.0037 27.8 5.6 65 190-255 63-132 (251)
46 3rkr_A Short chain oxidoreduct 24.8 1.8E+02 0.0062 25.1 7.2 13 295-307 178-190 (262)
47 4g81_D Putative hexonate dehyd 24.1 1.2E+02 0.0042 27.0 5.9 61 185-249 23-83 (255)
48 1t57_A Conserved protein MTH16 24.1 1.9E+02 0.0064 25.3 6.8 66 189-260 45-115 (206)
49 3p52_A NH(3)-dependent NAD(+) 23.8 3.6E+02 0.012 23.7 9.1 78 185-265 15-97 (249)
50 3t7c_A Carveol dehydrogenase; 23.5 2E+02 0.0068 25.5 7.3 61 184-248 41-113 (299)
51 4fs3_A Enoyl-[acyl-carrier-pro 23.2 1.5E+02 0.0053 25.7 6.4 31 197-227 7-38 (256)
52 1oj7_A Hypothetical oxidoreduc 23.1 1.1E+02 0.0039 29.0 5.9 78 185-264 41-129 (408)
53 3ucx_A Short chain dehydrogena 22.8 2.1E+02 0.007 24.8 7.2 60 184-248 24-84 (264)
54 1xdp_A Polyphosphate kinase; P 22.4 1.2E+02 0.0042 31.3 6.2 68 186-253 351-424 (687)
55 3qiv_A Short-chain dehydrogena 22.3 2.6E+02 0.0088 23.7 7.6 61 184-248 22-82 (253)
56 3pk0_A Short-chain dehydrogena 22.0 1.4E+02 0.0049 25.9 5.9 21 184-205 23-43 (262)
57 3maj_A DNA processing chain A; 21.9 1.4E+02 0.0047 28.7 6.1 65 197-265 238-303 (382)
58 1vlj_A NADH-dependent butanol 21.9 3.2E+02 0.011 25.8 8.8 80 185-264 32-124 (407)
59 3nkl_A UDP-D-quinovosamine 4-d 21.6 99 0.0034 24.0 4.3 46 185-230 55-101 (141)
60 2nu8_A Succinyl-COA ligase [AD 21.6 3.4E+02 0.012 24.3 8.6 18 209-226 76-93 (288)
61 4h27_A L-serine dehydratase/L- 21.5 1.5E+02 0.0052 27.6 6.3 59 189-255 86-144 (364)
62 3svt_A Short-chain type dehydr 21.3 1.8E+02 0.0063 25.3 6.6 20 184-204 24-43 (281)
63 3tjr_A Short chain dehydrogena 21.2 1.7E+02 0.0058 26.1 6.4 61 184-249 44-105 (301)
64 3ioy_A Short-chain dehydrogena 20.8 2.2E+02 0.0074 25.7 7.1 21 184-205 21-41 (319)
65 3nyw_A Putative oxidoreductase 20.8 1.6E+02 0.0053 25.5 5.9 12 295-306 157-168 (250)
66 3uve_A Carveol dehydrogenase ( 20.2 2.5E+02 0.0084 24.5 7.2 30 197-227 12-41 (286)
67 3tfo_A Putative 3-oxoacyl-(acy 20.1 1.8E+02 0.0062 25.5 6.2 60 184-248 17-77 (264)
No 1
>3v8e_A Nicotinamidase; hydrolase; HET: JJJ; 2.71A {Saccharomyces cerevisiae} PDB: 2h0r_A
Probab=100.00 E-value=8.4e-44 Score=324.99 Aligned_cols=206 Identities=31% Similarity=0.563 Sum_probs=171.9
Q ss_pred CeEEEEecccccccC--CCccccccccCCChHHHHHHHHHHHHHhccC--cEEEEeccCCCCccchhhhhhhhhccCCCC
Q psy8942 36 KSALLVINVQNDFVS--GTLNMSQRSAKQNGLQVIEPINKLLDTVNFN--AVFYSLDWHPSNHISFIDNIKLRKIHYTST 111 (340)
Q Consensus 36 ktALLVIDmQndF~~--G~l~~~~~~~~~~~~~iv~~I~~Li~~aR~~--~Vi~t~d~h~~~h~~f~~~~~~r~~~p~s~ 111 (340)
++|||||||||||++ |.+++ ++.++++++|++|++++|.. +|++|+|||+.+|.+|..++.+.+ |++.
T Consensus 1 ~~ALlvID~QndF~~p~G~l~v------~~~~~iv~~i~~ll~~~r~~~~~Vi~t~d~H~~~h~sf~~~~~g~~--~f~~ 72 (216)
T 3v8e_A 1 MKTLIVVDMQNDFISPLGSLTV------PKGEELINPISDLMQDADRDWHRIVVTRDWHPSRHISFAKNHKDKE--PYST 72 (216)
T ss_dssp CEEEEEECCBHHHHSTTSTTCC------TTGGGGHHHHHHHHHCGGGCEEEEEEEEECBCTTCTTBGGGSTTCC--TTCE
T ss_pred CcEEEEEcCcccccCCCCcccC------CCHHHHHHHHHHHHHHHhhcCCEEEEecccCCCcCcchHhcCCCCC--Ccce
Confidence 379999999999993 67754 57899999999999999875 899999999999999987643221 1111
Q ss_pred CCCCCccccccccccCCCccccccCCccccCCCCcccccccccc---cCCceEEEcCCCCCCCcccccccccccCCchHH
Q psy8942 112 VQPEDAQTYDTVVFDGDTPMKQKLWPRHCVQDSWGAELHKDLKI---VDNAIKVYMGTDPEEDSYSVFWDSKKLKRTSLA 188 (340)
Q Consensus 112 l~~~~~~~~~~v~~~g~~~~~~~~wp~hc~~Gt~g~el~~eL~p---~~~d~vi~K~~~p~~~r~SaF~~~~~~~~t~L~ 188 (340)
+...++ .+ ......++.+||+||++||+|++|+++|.+ .+.+.+|.|+++|++++||+|+++.+..+|+|.
T Consensus 73 ~~~~~p---~~---~~~~~~~~~~wp~hcv~gt~G~ei~~~l~~~~~~~~~~vi~K~~~~~~~~ySaF~~~~~~~~t~L~ 146 (216)
T 3v8e_A 73 YTYHSP---RP---GDDSTQEGILWPVHCVKNTWGSQLVDQIMDQVVTKHIKIVDKGFLTDREYYSAFHDIWNFHKTDMN 146 (216)
T ss_dssp EEEECS---ST---TCCCEEEEECBCSCCBTTSGGGSBCHHHHHHHHHHTCEEEEECCSTTSCCCSSSBCTTSCSBCSHH
T ss_pred eecccc---cc---ccccccccccCchhhcCCCCccccCHhHHhhhccCccEEEECCccCCCccccccccCCcCCCchHH
Confidence 000000 00 001123356899999999999999999998 467999999999999999999766556689999
Q ss_pred HHHHhCCCcEEEEEeecCChhHHHHHHHHHhCCCeEEEECCCCCCCCHH--HHHHHHHHHHhcCcEEec
Q psy8942 189 KQLEAKKVTDVYVCGLAYDVCVGASAIDAITIGYRTILIEDCCRGMDLD--DIERTRNTILENYGSCVQ 255 (340)
Q Consensus 189 ~~L~~~gi~~lii~Gv~T~~CV~~Ta~dA~~~Gy~V~vv~Da~~s~~~~--~~~~al~~l~~~g~~v~t 255 (340)
.+|+++|+++|+|||++|++||.+||++|+++||+|+|++|||++++.+ .|+.+++.|.+.|+.+++
T Consensus 147 ~~L~~~gi~~l~i~G~~t~~CV~~Ta~~a~~~g~~v~v~~Da~~~~~~~~~~~~~al~~m~~~Gv~i~~ 215 (216)
T 3v8e_A 147 KYLEKHHTDEVYIVGVALEYXVKATAISAAELGYKTTVLLDYTRPISDDPEVINKVKEELKAHNINVVD 215 (216)
T ss_dssp HHHHHTTCCEEEEEEECTTTHHHHHHHHHHHTTCEEEEEEEEEECSSCCHHHHHHHHHHHHHTTCEEEC
T ss_pred HHHHhCCCCEEEEEEeccccHHHHHHHHHHHCCCEEEEeccccCCCCcccHHHHHHHHHHHHcCCEEeC
Confidence 9999999999999999999999999999999999999999999999988 999999999999999875
No 2
>2wt9_A Nicotinamidase; hydrolase, pyrazinamidase; HET: GOL; 1.65A {Acinetobacter baumannii} PDB: 2wta_A*
Probab=100.00 E-value=4.3e-43 Score=323.82 Aligned_cols=207 Identities=35% Similarity=0.619 Sum_probs=176.1
Q ss_pred CCCCeEEEEecccccccC-CCccccccccCCChHHHHHHHHHHHHHhccCcEEEEeccCCCCccchhhhhhhhhccCCCC
Q psy8942 33 VRPKSALLVINVQNDFVS-GTLNMSQRSAKQNGLQVIEPINKLLDTVNFNAVFYSLDWHPSNHISFIDNIKLRKIHYTST 111 (340)
Q Consensus 33 ~~~ktALLVIDmQndF~~-G~l~~~~~~~~~~~~~iv~~I~~Li~~aR~~~Vi~t~d~h~~~h~~f~~~~~~r~~~p~s~ 111 (340)
.+.++|||||||||||++ |.+++ ++.++++++|++|++++ .+|++++++||.+|.+|+.++++++
T Consensus 27 ~~~~~ALlVID~Qndf~~~g~l~~------~~~~~vv~~i~~Li~~~--~pVi~t~~~h~~~~~~f~~~~~~~~------ 92 (235)
T 2wt9_A 27 QPQNSALVVVDVQNGFTPGGNLAV------ADADTIIPTINQLAGCF--ENVVLTQDWHPDNHISFAANHPGKQ------ 92 (235)
T ss_dssp CCTTEEEEEECCBGGGSTTSTTCC------TTGGGGHHHHHHHHTTC--SCEEEEEECBCTTCTTBGGGSTTCC------
T ss_pred CCCCeEEEEEcCCcCcCCCCccCC------CCHHHHHHHHHHHHHcC--CEEEEEeccCCCcchhhHhcCCCCC------
Confidence 467899999999999997 56643 57889999999999875 6899999999999988876532211
Q ss_pred CCCCCccccccccccCCCccccccCCccccCCCCcccccccccccCCceEEEcCCCCCCCcccccccccccCCchHHHHH
Q psy8942 112 VQPEDAQTYDTVVFDGDTPMKQKLWPRHCVQDSWGAELHKDLKIVDNAIKVYMGTDPEEDSYSVFWDSKKLKRTSLAKQL 191 (340)
Q Consensus 112 l~~~~~~~~~~v~~~g~~~~~~~~wp~hc~~Gt~g~el~~eL~p~~~d~vi~K~~~p~~~r~SaF~~~~~~~~t~L~~~L 191 (340)
.+.++.+.+ ..+.+||+||++|++|++|+++|.+.++|.+|.|+.+|++++||+|++.....+|+|+.+|
T Consensus 93 -------~~~~~~~~~---~~~~~wp~hcv~gt~g~~i~~~L~~~~~d~vi~K~~~~~~~~~SaF~~~~~~~~T~L~~~L 162 (235)
T 2wt9_A 93 -------PFETIELDY---GSQVLWPKHCIQGTHDAEFHPDLNIPTAQLIIRKGFHAHIDSYSAFMEADHTTMTGLTGYL 162 (235)
T ss_dssp -------TTCEEEETT---EEEECBCSCCBTTSGGGSBCTTCCCTTCCEEEEECCSTTCCCSSSSBCTTSCCBCSHHHHH
T ss_pred -------ccccccccc---ccccCCcchhcCCCchhHhChhhcccCCCEEEECCCCCCCccccccccCCccCCCcHHHHH
Confidence 111111111 1235799999999999999999999999999999988888999999855555579999999
Q ss_pred HhCCCcEEEEEeecCChhHHHHHHHHHhCCCeEEEECCCCCCCC-HHHHHHHHHHHHhcCcEEecHHHHHHHH
Q psy8942 192 EAKKVTDVYVCGLAYDVCVGASAIDAITIGYRTILIEDCCRGMD-LDDIERTRNTILENYGSCVQSDEVKSMV 263 (340)
Q Consensus 192 ~~~gi~~lii~Gv~T~~CV~~Ta~dA~~~Gy~V~vv~Da~~s~~-~~~~~~al~~l~~~g~~v~ts~ev~~~l 263 (340)
+++|+++|+|||++|++||.+||++|+++||+|+|++|||++++ ++.|+.+|+.|...|+.|+++++++.+|
T Consensus 163 ~~~gi~~lvv~G~~T~~CV~~Ta~dA~~~Gy~V~Vv~Da~as~~~~~~~~~aL~~m~~~g~~v~tt~~vl~el 235 (235)
T 2wt9_A 163 KERGIDTVYVVGIATDFCVAWTALDAVKQGFKTLVIEDACKGIDLNGSLEQAWQTMQQQGVVRIQSTDLLNEC 235 (235)
T ss_dssp HHTTCCEEEEEEECTTTHHHHHHHHHHHTTCEEEEEEEEEECCCSTTHHHHHHHHHHHTTCEEECHHHHC---
T ss_pred HHCCCCEEEEEEeCccHHHHHHHHHHHhCCCEEEEechhccCCChhHHHHHHHHHHHHcCCEEEEHHHHHhcC
Confidence 99999999999999999999999999999999999999999999 9999999999999999999999998775
No 3
>3r2j_A Alpha/beta-hydrolase-like protein; nicotinamidase, cytoplasmic; 2.68A {Leishmania infantum}
Probab=100.00 E-value=1.7e-43 Score=325.36 Aligned_cols=196 Identities=30% Similarity=0.507 Sum_probs=175.1
Q ss_pred hccCCCCeEEEEeccccccc-C-CCccccccccCCChHHHHHHHHHHHHHhccCcEEEEeccCCCCccchhhhhhhhhcc
Q psy8942 30 KVIVRPKSALLVINVQNDFV-S-GTLNMSQRSAKQNGLQVIEPINKLLDTVNFNAVFYSLDWHPSNHISFIDNIKLRKIH 107 (340)
Q Consensus 30 ~~i~~~ktALLVIDmQndF~-~-G~l~~~~~~~~~~~~~iv~~I~~Li~~aR~~~Vi~t~d~h~~~h~~f~~~~~~r~~~ 107 (340)
..+++.++|||||||||||+ + |.+++ ++.++++++|++|++++|..+|++++|+|+.++.+|..+
T Consensus 28 ~~l~~~~~ALlVIDmQndF~~p~G~l~~------~~~~~iv~~i~~Li~~ar~~pVi~t~d~h~~~~~~f~~~------- 94 (227)
T 3r2j_A 28 VTVSSTTDVLIIADMQVDFLAPGGSLHV------KGGEALLDGINAVSSQLPFRYQVATQDWHPENHCSFVTH------- 94 (227)
T ss_dssp EECCTTTEEEEEECCBHHHHSTTCSSCC------TTCGGGHHHHHHHHHHSCCSEEEEEEECBCTTCTTBGGG-------
T ss_pred cccCCCCeEEEEEcCchHhhCCCCccCC------CCHHHHHHHHHHHHHHcCCCeEEEEEeeCCCCccchhhh-------
Confidence 36889999999999999999 3 66654 578999999999999999889999999998877665421
Q ss_pred CCCCCCCCCccccccccccCCCccccccCCccccCCCCcccccccccccCCceEEEcCCCCCCCcccccccccccCCchH
Q psy8942 108 YTSTVQPEDAQTYDTVVFDGDTPMKQKLWPRHCVQDSWGAELHKDLKIVDNAIKVYMGTDPEEDSYSVFWDSKKLKRTSL 187 (340)
Q Consensus 108 p~s~l~~~~~~~~~~v~~~g~~~~~~~~wp~hc~~Gt~g~el~~eL~p~~~d~vi~K~~~p~~~r~SaF~~~~~~~~t~L 187 (340)
...||+||++|++|++|+++|.+.++|.+|.|+++|++++||+|+++.. .+|+|
T Consensus 95 -------------------------~g~wp~h~~~gt~G~ei~~~L~~~~~d~vi~K~~~~~~~~~SaF~~~~~-~~t~L 148 (227)
T 3r2j_A 95 -------------------------GGPWPPHCVQGSAGAQLHAGLHTQRINAVIRKGVTQQADSYSAFVEDNG-VSTGL 148 (227)
T ss_dssp -------------------------TSSBCSCSBTTSGGGSBCTTSCCTTCCEEEEESCSTTCCCSSSSBCTTS-CBCSH
T ss_pred -------------------------cCcCcccccCCCchhHHhHhhcccCCCEEEECCCcccccccchhccCCC-CCCcH
Confidence 1359999999999999999999999999999999999999999943222 28999
Q ss_pred HHHHHhCCCcEEEEEeecCChhHHHHHHHHHhCCCeEEEECCCCCCCCHHHHHHHHHHHHhcCcEEecHHHHHHHHh
Q psy8942 188 AKQLEAKKVTDVYVCGLAYDVCVGASAIDAITIGYRTILIEDCCRGMDLDDIERTRNTILENYGSCVQSDEVKSMVE 264 (340)
Q Consensus 188 ~~~L~~~gi~~lii~Gv~T~~CV~~Ta~dA~~~Gy~V~vv~Da~~s~~~~~~~~al~~l~~~g~~v~ts~ev~~~l~ 264 (340)
+.+|+++|+++|+|||++|++||.+||++|+++||+|+|++|||++++++.|+.+++.|...|+.|+++++++.+|.
T Consensus 149 ~~~L~~~gi~~lvv~G~~T~~CV~~Ta~dA~~~Gy~V~Vv~Da~as~~~~~h~~aL~~m~~~g~~v~~s~~vl~~~~ 225 (227)
T 3r2j_A 149 AGLLHSIGARRVFVCGVAYDFCVFFTAMDARKNGFSVVLLEDLTAAVDDAAWSARTAELKDAGVVLLKSSALVAEGT 225 (227)
T ss_dssp HHHHHHHTCCEEEEEESCTTTHHHHHHHHHHHTTCEEEEEEEEECCSCGGGHHHHHHHHHTTTCEEECGGGEECC--
T ss_pred HHHHHHcCCCEEEEEEeccchHHHHHHHHHHHCCCEEEEEhHhhCCCCHHHHHHHHHHHHHcCCEEEEHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999887664
No 4
>3hb7_A Isochorismatase hydrolase; PS structural genomics, midwest center for structural genomics structure initiative; 2.30A {Alkaliphilus metalliredigens}
Probab=100.00 E-value=2.9e-41 Score=305.40 Aligned_cols=181 Identities=24% Similarity=0.338 Sum_probs=163.7
Q ss_pred cCCCCeEEEEecccccccC--CCccccccccCCChHHHHHHHHHHHHHhc---cC--cEEEEeccCCCCccchhhhhhhh
Q psy8942 32 IVRPKSALLVINVQNDFVS--GTLNMSQRSAKQNGLQVIEPINKLLDTVN---FN--AVFYSLDWHPSNHISFIDNIKLR 104 (340)
Q Consensus 32 i~~~ktALLVIDmQndF~~--G~l~~~~~~~~~~~~~iv~~I~~Li~~aR---~~--~Vi~t~d~h~~~h~~f~~~~~~r 104 (340)
++++++|||||||||+|++ |.+.. ++.+++++++++|+++|| .. +|+|++++|++.+.
T Consensus 3 ~~m~~tALlvID~Q~~f~~~~g~l~~------~~~~~ii~~i~~Ll~~ar~~~~~g~pVi~t~~~~~~~~~--------- 67 (204)
T 3hb7_A 3 QGMAKHAILVIDMLNDFVGEKAPLRC------PGGETIIPDLQKIFEWVRGREGDDIHLVHIQEAHRKNDA--------- 67 (204)
T ss_dssp SSSCCEEEEEECCBTTTSSTTCTTCC------GGGGGGHHHHHHHHHHHHHSSSSSEEEEEEEECBCCCSC---------
T ss_pred CCCCCeEEEEEcCchhhcCCCCcccC------ccHHHHHHHHHHHHHHHHhhhhcCCEEEEEEccCCCCCh---------
Confidence 5678999999999999997 55543 468999999999999999 75 89999988764211
Q ss_pred hccCCCCCCCCCccccccccccCCCccccccCCccccCCCCcccccccccccCCceEEEcCCCCCCCcccccccccccCC
Q psy8942 105 KIHYTSTVQPEDAQTYDTVVFDGDTPMKQKLWPRHCVQDSWGAELHKDLKIVDNAIKVYMGTDPEEDSYSVFWDSKKLKR 184 (340)
Q Consensus 105 ~~~p~s~l~~~~~~~~~~v~~~g~~~~~~~~wp~hc~~Gt~g~el~~eL~p~~~d~vi~K~~~p~~~r~SaF~~~~~~~~ 184 (340)
+...||+||++|++|++++++|.|.++|.+|.| ++||+|+ +
T Consensus 68 ---------------------------~~~~~~~~~~~gt~g~~i~~~l~~~~~~~vi~K------~~~saF~------~ 108 (204)
T 3hb7_A 68 ---------------------------DFRVRPLHAVKGTWGSDFIPELYPQEDEYIVQK------RRHSGFA------H 108 (204)
T ss_dssp ---------------------------CSSSSCSSCBTTSTTTSBCGGGCCCTTCEEEEE------SSSSTTT------T
T ss_pred ---------------------------hhhhcchhccCCCchhhcCHhhCCCCCCEEEeC------CccCCcc------C
Confidence 124699999999999999999999999999999 4899998 9
Q ss_pred chHHHHHHhCCCcEEEEEeecCChhHHHHHHHHHhCCCeEEEECCCCCCCCHHHHHHHHHHHHhcCcEEecHHHHHHHHh
Q psy8942 185 TSLAKQLEAKKVTDVYVCGLAYDVCVGASAIDAITIGYRTILIEDCCRGMDLDDIERTRNTILENYGSCVQSDEVKSMVE 264 (340)
Q Consensus 185 t~L~~~L~~~gi~~lii~Gv~T~~CV~~Ta~dA~~~Gy~V~vv~Da~~s~~~~~~~~al~~l~~~g~~v~ts~ev~~~l~ 264 (340)
|+|+.+|+++|+++|+|+|+.||+||.+||++|+++||+|+|++|||++++++.|+.+|++|. .|+.|+++++++.+|.
T Consensus 109 t~L~~~L~~~gi~~lvi~G~~T~~CV~~Ta~dA~~~Gy~V~vv~Da~as~~~~~h~~al~~l~-~~a~v~tt~~vl~~l~ 187 (204)
T 3hb7_A 109 TDLDLYLKEEGIDTVVLTGVWTNVCVRSTATDALANAYKVITLSDGTASKTEEMHEYGLNDLS-IFTKVMTVDQYIQAWE 187 (204)
T ss_dssp SSHHHHHHHTTCCEEEEEEECTTTHHHHHHHHHHHTTCEEEEEEEEEECSSHHHHHHHHHHHH-HHSEEECHHHHHHHHH
T ss_pred ccHHHHHHHCCCCEEEEEeecccHHHHHHHHHHHHCCCEEEEechhccCCCHHHHHHHHHHHH-hCCEEeeHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999999999999999 9999999999999999
Q ss_pred cCC
Q psy8942 265 GKD 267 (340)
Q Consensus 265 ~~~ 267 (340)
++.
T Consensus 188 ~~~ 190 (204)
T 3hb7_A 188 NDE 190 (204)
T ss_dssp C--
T ss_pred ccC
Confidence 876
No 5
>3gbc_A Pyrazinamidase/nicotinamidas PNCA; nicotinamidase - pyrazinamidase, resistance to pyrazinamide, hydrolase; 2.20A {Mycobacterium tuberculosis} PDB: 3pl1_A
Probab=100.00 E-value=1.8e-40 Score=296.20 Aligned_cols=181 Identities=29% Similarity=0.425 Sum_probs=155.3
Q ss_pred CeEEEEecccccccC-CCccccccccCCChHHHHHHHHHHHHHhcc-CcEEEEeccCC--CCccchhhhhhhhhccCCCC
Q psy8942 36 KSALLVINVQNDFVS-GTLNMSQRSAKQNGLQVIEPINKLLDTVNF-NAVFYSLDWHP--SNHISFIDNIKLRKIHYTST 111 (340)
Q Consensus 36 ktALLVIDmQndF~~-G~l~~~~~~~~~~~~~iv~~I~~Li~~aR~-~~Vi~t~d~h~--~~h~~f~~~~~~r~~~p~s~ 111 (340)
++|||||||||||++ |.+++ ++.++++++|++|++++|. .+|++|+|||. ..|.++.
T Consensus 1 ~~ALlvID~Q~df~~~g~l~~------~~~~~vv~~i~~li~~~r~~~~Vi~t~d~h~~p~~~~~~~------------- 61 (186)
T 3gbc_A 1 MRALIIVDVQNDFCEGGSLAV------TGGAALARAISDYLAEAADYHHVVATKDFHIDPGDHFSGT------------- 61 (186)
T ss_dssp CEEEEEECCBGGGSTTSTTCC------TTHHHHHHHHTTSSSSCCCCSEEEEEEECBSCCGGGBCSS-------------
T ss_pred CeEEEEEcCCCcCCCCCcccC------CCHHHHHHHHHHHHHHhccCCEEEEEEEEcCCCCcccccC-------------
Confidence 479999999999997 66654 6899999999999999986 58999999994 3222100
Q ss_pred CCCCCccccccccccCCCccccccCCccccCCCCcccccccccccCCceEEEcCCCCCCCcccccccccccCCchHHHHH
Q psy8942 112 VQPEDAQTYDTVVFDGDTPMKQKLWPRHCVQDSWGAELHKDLKIVDNAIKVYMGTDPEEDSYSVFWDSKKLKRTSLAKQL 191 (340)
Q Consensus 112 l~~~~~~~~~~v~~~g~~~~~~~~wp~hc~~Gt~g~el~~eL~p~~~d~vi~K~~~p~~~r~SaF~~~~~~~~t~L~~~L 191 (340)
| .....||+||++||+|++++++|.+.+.|.+|.|+.++ ..||+|++.+. .+|+|.++|
T Consensus 62 --~----------------~~~~~wp~hc~~gt~g~~~~~~l~~~~~d~vi~K~~~~--~~ysaF~~~~~-~~t~L~~~L 120 (186)
T 3gbc_A 62 --P----------------DYSSSWPPHCVSGTPGADFHPSLDTSAIEAVFYKGAYT--GAYSGFEGVDE-NGTPLLNWL 120 (186)
T ss_dssp --C----------------CSSSCBCCCSBTTSGGGSBCSSSCCTTCCEEEEECSSS--CCCCGGGCBCS-SSCBHHHHH
T ss_pred --c----------------cccccCcccccCCCCcccCChhhhccCCcEEEECCCCC--ccccccccCCC-CCCcHHHHH
Confidence 0 01246999999999999999999999999999997432 35899974321 368999999
Q ss_pred HhCCCcEEEEEeecCChhHHHHHHHHHhCCCeEEEECCCCCCCCHHHHHHHHHHHHhcCcEEecH
Q psy8942 192 EAKKVTDVYVCGLAYDVCVGASAIDAITIGYRTILIEDCCRGMDLDDIERTRNTILENYGSCVQS 256 (340)
Q Consensus 192 ~~~gi~~lii~Gv~T~~CV~~Ta~dA~~~Gy~V~vv~Da~~s~~~~~~~~al~~l~~~g~~v~ts 256 (340)
+++|+++|+|+|++||+||.+||++|+++||+|+|++|||++++++.|+.+++.|++.|+.++++
T Consensus 121 ~~~gi~~lvv~G~~t~~CV~~Ta~da~~~G~~v~v~~Da~~~~~~~~~~~al~~m~~~G~~i~~s 185 (186)
T 3gbc_A 121 RQRGVDEVDVVGIATDHCVRQTAEDAVRNGLATRVLVDLTAGVSADTTVAALEEMRTASVELVCS 185 (186)
T ss_dssp HHTTCCEEEEEEECTTTHHHHHHHHHHHTTCEEEEEEEEEECSCHHHHHHHHHHHHHTTCEEECC
T ss_pred HhcCCCEEEEEEecccHHHHHHHHHHHHCCCeEEEEhhhcCCCCHHHHHHHHHHHHHcCCEEeec
Confidence 99999999999999999999999999999999999999999999999999999999999999876
No 6
>3eef_A N-carbamoylsarcosine amidase related protein; structural genomics, protein structure initiative, midwest center for structural genomics; 2.35A {Thermoplasma acidophilum}
Probab=100.00 E-value=4.7e-41 Score=298.51 Aligned_cols=177 Identities=26% Similarity=0.444 Sum_probs=155.2
Q ss_pred CCeEEEEecccccccCCCccccccccCCChHHHHHHHHHHHHHhccC--cEEEEeccCCCCccchhhhhhhhhccCCCCC
Q psy8942 35 PKSALLVINVQNDFVSGTLNMSQRSAKQNGLQVIEPINKLLDTVNFN--AVFYSLDWHPSNHISFIDNIKLRKIHYTSTV 112 (340)
Q Consensus 35 ~ktALLVIDmQndF~~G~l~~~~~~~~~~~~~iv~~I~~Li~~aR~~--~Vi~t~d~h~~~h~~f~~~~~~r~~~p~s~l 112 (340)
+|+|||||||||+|.+|.+.. ++.+++++++++|+++||.. ||+|++++|++.+..
T Consensus 1 mk~ALlvID~Q~~f~~g~~~~------~~~~~~i~~i~~l~~~ar~~g~pVi~t~~~~~~~~~~---------------- 58 (182)
T 3eef_A 1 MKPALVVVDMVNEFIHGRLAT------PEAMKTVGPARKVIETFRRSGLPVVYVNDSHYPDDPE---------------- 58 (182)
T ss_dssp CCEEEEEECCBHHHHTSTTCC------HHHHHHHHHHHHHHHHHHHTTCCEEEEEECBCTTSTT----------------
T ss_pred CCEEEEEEcCCCcCCCCccCC------ccHHHHHHHHHHHHHHHHHcCCeEEEEecccCCCChh----------------
Confidence 378999999999999877653 46899999999999999874 899999988654321
Q ss_pred CCCCccccccccccCCCccccccCCccccCCCCcccccccccccCCceEEEcCCCCCCCcccccccccccCCchHHHHHH
Q psy8942 113 QPEDAQTYDTVVFDGDTPMKQKLWPRHCVQDSWGAELHKDLKIVDNAIKVYMGTDPEEDSYSVFWDSKKLKRTSLAKQLE 192 (340)
Q Consensus 113 ~~~~~~~~~~v~~~g~~~~~~~~wp~hc~~Gt~g~el~~eL~p~~~d~vi~K~~~p~~~r~SaF~~~~~~~~t~L~~~L~ 192 (340)
...||+||+.|++|++++++|+|.++|.+|.| ++||+|+ +|+|+.+|+
T Consensus 59 --------------------~~~~~~~~~~g~~g~~~~~~l~~~~~~~vi~K------~~~saF~------~t~L~~~L~ 106 (182)
T 3eef_A 59 --------------------IRIWGRHSMKGDDGSEVIDEIRPSAGDYVLEK------HAYSGFY------GTNLDMILR 106 (182)
T ss_dssp --------------------HHHHCSCSBTTSGGGSBCGGGCCCTTCEEEEE------SSSSTTT------TSSHHHHHH
T ss_pred --------------------hhhcchhhcCCCchhhhhhhhCCCCCcEEEee------cccCCCC------CCCHHHHHH
Confidence 13689999999999999999999999999999 5899998 999999999
Q ss_pred hCCCcEEEEEeecCChhHHHHHHHHHhCCCeEEEECCCCCCCCHHHHHHHHHHHHh-cCcEEecHHHHHHHHhcCCC
Q psy8942 193 AKKVTDVYVCGLAYDVCVGASAIDAITIGYRTILIEDCCRGMDLDDIERTRNTILE-NYGSCVQSDEVKSMVEGKDR 268 (340)
Q Consensus 193 ~~gi~~lii~Gv~T~~CV~~Ta~dA~~~Gy~V~vv~Da~~s~~~~~~~~al~~l~~-~g~~v~ts~ev~~~l~~~~~ 268 (340)
++|+++|+|+|+.||+||.+||++|+++||+|+|++|||++ ++.|+.+ ++|.+ .|+.|+++++++.+|.++..
T Consensus 107 ~~gi~~lii~G~~T~~CV~~Ta~da~~~Gy~V~vv~Da~as--~~~~~~a-~~m~~~~ga~v~~~~~vl~~l~~~~~ 180 (182)
T 3eef_A 107 ANGIDTVVLIGLDADICVRHTAADALYRNYRIIVVEDAVAA--RIDPNWK-DYFTRVYGATVKRSDEIEGMLQEDQI 180 (182)
T ss_dssp HTTCCEEEEEEECTTTHHHHHHHHHHHTTCEEEEEEEEEEC--SSCTTHH-HHHHHHHCCEEECTTCCCC-------
T ss_pred hcCCCeEEEEEeccCHHHHHHHHHHHHCCCEEEEehhhcCC--HHHHHHH-HHHHHhcCcEEeEHHHHHHHhhcccc
Confidence 99999999999999999999999999999999999999999 7888999 99999 69999999999999987653
No 7
>1im5_A 180AA long hypothetical pyrazinamidase/nicotinamidase; pyrazinamide, tuberculosis, PZA resistance, drug resistance, metal ION catalysis; 1.65A {Pyrococcus horikoshii} SCOP: c.33.1.3 PDB: 1ilw_A
Probab=100.00 E-value=1.3e-39 Score=288.32 Aligned_cols=175 Identities=36% Similarity=0.683 Sum_probs=156.1
Q ss_pred CCeEEEEecccccccC-CCccccccccCCChHHHHHHHHHHHHHhccC--cEEEEeccCCCCccchhhhhhhhhccCCCC
Q psy8942 35 PKSALLVINVQNDFVS-GTLNMSQRSAKQNGLQVIEPINKLLDTVNFN--AVFYSLDWHPSNHISFIDNIKLRKIHYTST 111 (340)
Q Consensus 35 ~ktALLVIDmQndF~~-G~l~~~~~~~~~~~~~iv~~I~~Li~~aR~~--~Vi~t~d~h~~~h~~f~~~~~~r~~~p~s~ 111 (340)
+++|||||||||+|++ |.++. ++.+++++++++|++++|.. +|++++++|+..+..|...
T Consensus 2 ~~~aLlvID~Q~~f~~~g~l~~------~~~~~~v~~i~~l~~~ar~~g~pVi~t~~~~~~~~~~f~~~----------- 64 (180)
T 1im5_A 2 PEEALIVVDMQRDFMPGGALPV------PEGDKIIPKVNEYIRKFKEKGALIVATRDWHPENHISFRER----------- 64 (180)
T ss_dssp CCEEEEEECCBGGGSTTSSSCC------TTGGGGHHHHHHHHHHHHHTTCEEEEEEECBCTTCTTBGGG-----------
T ss_pred CccEEEEEcCCCccCCCCcccC------CCHHHHHHHHHHHHHHHHHcCCEEEEEecccCCCCcChhhc-----------
Confidence 5799999999999995 66643 57889999999999999874 8999999987765443311
Q ss_pred CCCCCccccccccccCCCccccccCCccccCCCCcccccccccccCCceEEEcCCCCCCCcccccccccccCCchHHHHH
Q psy8942 112 VQPEDAQTYDTVVFDGDTPMKQKLWPRHCVQDSWGAELHKDLKIVDNAIKVYMGTDPEEDSYSVFWDSKKLKRTSLAKQL 191 (340)
Q Consensus 112 l~~~~~~~~~~v~~~g~~~~~~~~wp~hc~~Gt~g~el~~eL~p~~~d~vi~K~~~p~~~r~SaF~~~~~~~~t~L~~~L 191 (340)
...||+||++|++|++++ |.+.+++.++.|+.+|++++||+|+ +|+|+.+|
T Consensus 65 ---------------------~~~~p~~~~~gt~g~~i~--l~~~~~~~vi~K~~~~~~~~~saF~------~t~L~~~L 115 (180)
T 1im5_A 65 ---------------------GGPWPRHCVQNTPGAEFV--VDLPEDAVIISKATEPDKEAYSGFE------GTDLAKIL 115 (180)
T ss_dssp ---------------------TCSBCSCSBTTSGGGSBC--SCCCTTCEEEEECCSTTCCCCSTTT------TSSHHHHH
T ss_pred ---------------------CCCCchhhcCCCCCeEEE--EecCCCcEEEECCCCCCCccccCcc------CCCHHHHH
Confidence 136999999999999998 8755568999999888888899998 89999999
Q ss_pred HhCCCcEEEEEeecCChhHHHHHHHHHhCCCeEEEECCCCCCCCHHHHHHHHHHHHhcCcEEec
Q psy8942 192 EAKKVTDVYVCGLAYDVCVGASAIDAITIGYRTILIEDCCRGMDLDDIERTRNTILENYGSCVQ 255 (340)
Q Consensus 192 ~~~gi~~lii~Gv~T~~CV~~Ta~dA~~~Gy~V~vv~Da~~s~~~~~~~~al~~l~~~g~~v~t 255 (340)
+++|+++|+|+|+.||+||.+||++|+++||+|+|++|||++++++.|+.+++.|...|+.|++
T Consensus 116 ~~~gi~~lvi~G~~t~~CV~~Ta~da~~~Gy~v~vv~Da~~~~~~~~h~~al~~m~~~g~~v~~ 179 (180)
T 1im5_A 116 RGNGVKRVYICGVATEYCVRATALDALKHGFEVYLLRDAVKGIKPEDEERALEEMKSRGIKIVQ 179 (180)
T ss_dssp HHTTCCEEEEEEECTTTHHHHHHHHHHHTTCEEEEEEEEEECSCHHHHHHHHHHHHHTTCEEEC
T ss_pred HhCCCCEEEEEEeecCHHHHHHHHHHHHCCCEEEEehhhccCCCHHHHHHHHHHHHHcCCEEEe
Confidence 9999999999999999999999999999999999999999999999999999999999999876
No 8
>3tg2_A Vibriobactin-specific isochorismatase; hydrolase; HET: ISC PGE; 1.10A {Vibrio cholerae} PDB: 3tb4_A*
Probab=100.00 E-value=9.9e-40 Score=299.53 Aligned_cols=187 Identities=17% Similarity=0.179 Sum_probs=159.0
Q ss_pred ccCCCCeEEEEecccccccCCCccccccccCCChHHHHHHHHHHHHHhccC--cEEEEeccCCCCccchhhhhhhhhccC
Q psy8942 31 VIVRPKSALLVINVQNDFVSGTLNMSQRSAKQNGLQVIEPINKLLDTVNFN--AVFYSLDWHPSNHISFIDNIKLRKIHY 108 (340)
Q Consensus 31 ~i~~~ktALLVIDmQndF~~G~l~~~~~~~~~~~~~iv~~I~~Li~~aR~~--~Vi~t~d~h~~~h~~f~~~~~~r~~~p 108 (340)
++++.|+|||||||||+|+++... ..+...++++||++|+++||.. +||||+++|..+...+..
T Consensus 23 ~ldp~rtALlVIDmQ~~F~~~~~~-----~~~~~~~vv~~i~~Li~~ar~~g~pVi~t~~~~~~~~~~~~~--------- 88 (223)
T 3tg2_A 23 RIDASRAVLLIHNMQEYFVHYFDS-----QAEPIPSLIKHIQQLKAHAKQAGIPVVYTAQPANQDPAERAL--------- 88 (223)
T ss_dssp CCCTTTEEEEEECCBHHHHTTBCT-----TSTTHHHHHHHHHHHHHHHHHHTCCEEEEECCSSCCHHHHTT---------
T ss_pred cCCCCCeEEEEEcCchhhhCcccc-----ccccHHHHHHHHHHHHHHHHHcCCeEEEEEEeCCCCchhhcc---------
Confidence 688999999999999999984211 1246789999999999999873 899999988764321110
Q ss_pred CCCCCCCCccccccccccCCCccccccCCccccCCCCcccccccccccCCceEEEcCCCCCCCcccccccccccCCchHH
Q psy8942 109 TSTVQPEDAQTYDTVVFDGDTPMKQKLWPRHCVQDSWGAELHKDLKIVDNAIKVYMGTDPEEDSYSVFWDSKKLKRTSLA 188 (340)
Q Consensus 109 ~s~l~~~~~~~~~~v~~~g~~~~~~~~wp~hc~~Gt~g~el~~eL~p~~~d~vi~K~~~p~~~r~SaF~~~~~~~~t~L~ 188 (340)
....|++++ ++|++++++|.|.++|.+|.| .+||+|+ +|+|+
T Consensus 89 -----------------------~~~~~~~~~---~~~~~i~~eL~p~~~d~vi~K------~~~saF~------~t~L~ 130 (223)
T 3tg2_A 89 -----------------------LSDFWGPGL---SEETAIIAPLAPESGDVQLTK------WRYSAFK------KSPLL 130 (223)
T ss_dssp -----------------------HHHHHCSCC---SSCCSBCGGGCCCTTSEEEEC------CSSSTTT------TSSHH
T ss_pred -----------------------cccccCCCC---CcccccChhhCCCCCCEEEEC------Ccccccc------cccHH
Confidence 012455543 677899999999999999999 5899998 99999
Q ss_pred HHHHhCCCcEEEEEeecCChhHHHHHHHHHhCCCeEEEECCCCCCCCHHHHHHHHHHHHhcCcEEecHHHHHHHHhcCCC
Q psy8942 189 KQLEAKKVTDVYVCGLAYDVCVGASAIDAITIGYRTILIEDCCRGMDLDDIERTRNTILENYGSCVQSDEVKSMVEGKDR 268 (340)
Q Consensus 189 ~~L~~~gi~~lii~Gv~T~~CV~~Ta~dA~~~Gy~V~vv~Da~~s~~~~~~~~al~~l~~~g~~v~ts~ev~~~l~~~~~ 268 (340)
.+|+++|+++|+|||+.||+||.+||++|+++||+|+|++|||++++++.|+.+|++|.+.++.|+|+++++.+|.+.+.
T Consensus 131 ~~L~~~gi~~lii~G~~t~~CV~~Ta~da~~~Gy~v~vv~Da~as~~~~~h~~aL~~~~~~~a~v~tte~~l~eL~~~~~ 210 (223)
T 3tg2_A 131 DWLRETGRDQLIITGVYAHIGILSTALDAFMFDIQPFVIGDGVADFSLSDHEFSLRYISGRTGAVKSTQQACLEIAAQHS 210 (223)
T ss_dssp HHHHHHTCCEEEEEEECTTTHHHHHHHHHHHTTCEEEEEEEEEECSSHHHHHHHHHHHHHHTCEEECHHHHHHHHC----
T ss_pred HHHHhcCcCceEEeecccChHHHHHHHHHHHCCCEEEEeCcccCCCCHHHHHHHHHHHHHcCCEEecHHHHHHHHHhccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998876
Q ss_pred C
Q psy8942 269 R 269 (340)
Q Consensus 269 ~ 269 (340)
+
T Consensus 211 ~ 211 (223)
T 3tg2_A 211 K 211 (223)
T ss_dssp -
T ss_pred c
Confidence 5
No 9
>3hu5_A Isochorismatase family protein; structural genomics, protein structure INI NEW YORK structural genomix research consortium, nysgxrc; 1.50A {Desulfovibrio vulgaris}
Probab=100.00 E-value=4.6e-39 Score=290.81 Aligned_cols=187 Identities=20% Similarity=0.328 Sum_probs=157.7
Q ss_pred ccCCCCeEEEEecccccccC--CCccccccccCCChHHHHHHHHHHHHHhccC--cEEEE-eccCCCCccchhhhhhhhh
Q psy8942 31 VIVRPKSALLVINVQNDFVS--GTLNMSQRSAKQNGLQVIEPINKLLDTVNFN--AVFYS-LDWHPSNHISFIDNIKLRK 105 (340)
Q Consensus 31 ~i~~~ktALLVIDmQndF~~--G~l~~~~~~~~~~~~~iv~~I~~Li~~aR~~--~Vi~t-~d~h~~~h~~f~~~~~~r~ 105 (340)
.++++++|||||||||+|++ |.+.. ++.+++++++++|+++||.. +|||+ ++++|.. ..+.
T Consensus 3 ~~~~~~tALlvID~Q~~f~~~~g~l~~------~~~~~iv~~i~~L~~~ar~~g~pVi~~~~~~~~~~-~~~~------- 68 (204)
T 3hu5_A 3 LTRNRTVALAIIDMQNDFVLPGAPACV------EGAMGTVPVIAGLLAKARAEGWMVLHVVRAHRADG-SDAE------- 68 (204)
T ss_dssp ---CCCEEEEEECCBHHHHSTTSTTCC------TTHHHHHHHHHHHHHHHHHHTCEEEEEECCBCTTS-TTSC-------
T ss_pred CCCCCCeEEEEECCchhhhCCCCcccc------cCHHHHHHHHHHHHHHHHHCCCeEEEEEcccCCCc-cccc-------
Confidence 45788999999999999994 45543 57899999999999999863 89886 4443321 1100
Q ss_pred ccCCCCCCCCCccccccccccCCCccccccCC---ccccCCCCcccccccccccCCceEEEcCCCCCCCccccccccccc
Q psy8942 106 IHYTSTVQPEDAQTYDTVVFDGDTPMKQKLWP---RHCVQDSWGAELHKDLKIVDNAIKVYMGTDPEEDSYSVFWDSKKL 182 (340)
Q Consensus 106 ~~p~s~l~~~~~~~~~~v~~~g~~~~~~~~wp---~hc~~Gt~g~el~~eL~p~~~d~vi~K~~~p~~~r~SaF~~~~~~ 182 (340)
. .....|| .+|++|++|++|+++|.|.++|.+|.| .+||+|+
T Consensus 69 -------------~-----------~~~~~~~~~~~~~~~gt~g~ei~~~l~~~~~~~vi~K------~~~saF~----- 113 (204)
T 3hu5_A 69 -------------K-----------SREHLFLEGGGLCVAGTPGAEIVAGLEPASGETVLVK------TRFSAFM----- 113 (204)
T ss_dssp -------------G-----------GGGGGGSSSCCSSBTTSGGGSBCTTCCCCTTCEEEEC------SSSSTTT-----
T ss_pred -------------c-----------cccccCCcccccccCCCcccccccccCCCCCCEEEEC------CccCCCC-----
Confidence 0 0112344 359999999999999999999999999 4899998
Q ss_pred CCchHHHHHHhCCCcEEEEEeecCChhHHHHHHHHHhCCCeEEEECCCCCCCCHHHHHHHHHHHHhcCcEEecHHHHHHH
Q psy8942 183 KRTSLAKQLEAKKVTDVYVCGLAYDVCVGASAIDAITIGYRTILIEDCCRGMDLDDIERTRNTILENYGSCVQSDEVKSM 262 (340)
Q Consensus 183 ~~t~L~~~L~~~gi~~lii~Gv~T~~CV~~Ta~dA~~~Gy~V~vv~Da~~s~~~~~~~~al~~l~~~g~~v~ts~ev~~~ 262 (340)
+|+|+.+|+++|+++|+|||++|++||.+||++|+++||+|+|++|||++++++.|+.+++.|...|+.|+++++++..
T Consensus 114 -~t~L~~~L~~~gi~~lvi~G~~T~~CV~~Ta~da~~~Gy~V~vv~Da~as~~~~~h~~al~~m~~~g~~v~tt~e~l~~ 192 (204)
T 3hu5_A 114 -GTECDMLLRRRGVDTLLVSGTQYPNCIRGTAVDAFALDYDVVVVTDACSARTPGVAESNINDMRAMGITCVPLTALDDV 192 (204)
T ss_dssp -TSSHHHHHHHTTCCEEEEEEECTTTHHHHHHHHHHHTTCEEEEEEEEEECSSHHHHHHHHHHHHHHTCEEECGGGHHHH
T ss_pred -CcCHHHHHHhCCCCeEEEeeeccchHHHHHHHHHHHCCCEEEEehhhhCCCCHHHHHHHHHHHHHhCCEEEEHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCC
Q psy8942 263 VEGKD 267 (340)
Q Consensus 263 l~~~~ 267 (340)
|.+..
T Consensus 193 l~~~~ 197 (204)
T 3hu5_A 193 LARRE 197 (204)
T ss_dssp HHC--
T ss_pred HHhcc
Confidence 98754
No 10
>3o94_A Nicotinamidase; hydrolase; 1.60A {Streptococcus pneumoniae} PDB: 3o90_A 3o91_A* 3o92_A* 3o93_A* 3s2s_A
Probab=100.00 E-value=4.5e-39 Score=292.87 Aligned_cols=177 Identities=23% Similarity=0.305 Sum_probs=152.0
Q ss_pred ccCCCCeEEEEecccccccC--CCccccccccCCChHHHHHHHHHHHHHhccC--cEEEEeccCCCCccchhhhhhhhhc
Q psy8942 31 VIVRPKSALLVINVQNDFVS--GTLNMSQRSAKQNGLQVIEPINKLLDTVNFN--AVFYSLDWHPSNHISFIDNIKLRKI 106 (340)
Q Consensus 31 ~i~~~ktALLVIDmQndF~~--G~l~~~~~~~~~~~~~iv~~I~~Li~~aR~~--~Vi~t~d~h~~~h~~f~~~~~~r~~ 106 (340)
+..++++|||||||||||++ |.++.+ ...++++++|++|+++||.. +|||++++|+.++..+
T Consensus 17 ~~~~m~~ALlVID~QndF~~p~G~l~~~-----~~~~~ii~~i~~Li~~aR~~g~pVi~t~d~h~~~~~~~--------- 82 (211)
T 3o94_A 17 RGSHMTKALISIDYTEDFVADSGKLTAG-----APAQAISDAISKVTRLAFERGDYIFFTIDAHEENDCFH--------- 82 (211)
T ss_dssp ----CCCEEEEESCBHHHHSTTCTTCCC-----HHHHTTHHHHHHHHHHHHHTTCEEEEEEECBCTTCTTC---------
T ss_pred CCCCCCeEEEEEcCchhhhCCCCcccCC-----ccHHHHHHHHHHHHHHHHHcCCeEEEEEeecCCCCccC---------
Confidence 34457899999999999995 566431 13788999999999999864 8999999997643210
Q ss_pred cCCCCCCCCCccccccccccCCCccccccCCccccCCCCccccccccc-------ccCCceEEEcCCCCCCCcccccccc
Q psy8942 107 HYTSTVQPEDAQTYDTVVFDGDTPMKQKLWPRHCVQDSWGAELHKDLK-------IVDNAIKVYMGTDPEEDSYSVFWDS 179 (340)
Q Consensus 107 ~p~s~l~~~~~~~~~~v~~~g~~~~~~~~wp~hc~~Gt~g~el~~eL~-------p~~~d~vi~K~~~p~~~r~SaF~~~ 179 (340)
.+..+||+||++|++|++++++|. |.++|+++.| .+||+|+
T Consensus 83 ------------------------~~~~~~p~hcv~gt~G~el~~~L~~~~~~~~p~~~d~vi~K------~~~saF~-- 130 (211)
T 3o94_A 83 ------------------------PESKLFPPHNLIGTSGRNLYGDLGIFYQEHGSDSRVFWMDK------RHYSAFS-- 130 (211)
T ss_dssp ------------------------GGGGTSCSCSBTTSGGGSBCTHHHHHHHHHTTSTTEEEEEE------SSSSSST--
T ss_pred ------------------------cccccccccccCCChhHhhcHHHHHhhhhcCCCCCcEEEEe------cccCcCC--
Confidence 013479999999999999999996 5678899999 5899998
Q ss_pred cccCCchHHHHHHhCCCcEEEEEeecCChhHHHHHHHHHhCCCeEEEECCCCCCCCHHHHHHHHHHHHh-cCcEEecHH
Q psy8942 180 KKLKRTSLAKQLEAKKVTDVYVCGLAYDVCVGASAIDAITIGYRTILIEDCCRGMDLDDIERTRNTILE-NYGSCVQSD 257 (340)
Q Consensus 180 ~~~~~t~L~~~L~~~gi~~lii~Gv~T~~CV~~Ta~dA~~~Gy~V~vv~Da~~s~~~~~~~~al~~l~~-~g~~v~ts~ 257 (340)
+|+|+.+|+++|+++|+|+|++|++||.+||++|+++||+|+|++|||++++++.|+.+|++|.+ .|+.+++++
T Consensus 131 ----~t~L~~~L~~~gi~~lvi~G~~T~~CV~~Ta~~a~~~Gy~v~vv~Da~~~~~~~~h~~aL~~m~~~~G~~i~ts~ 205 (211)
T 3o94_A 131 ----GTDLDIRLRERRVSTVILTGVLTDISVLHTAIDAYNLGYDIEIVKPAVASIWPENHQFALGHFKNTLGAKLVDEN 205 (211)
T ss_dssp ----TSSHHHHHHHTTCCEEEEEEECTTTHHHHHHHHHHHTTCEEEEEEEEEECSCHHHHHHHHHHHHHTSCCEEECTT
T ss_pred ----CchHHHHHHhCCCCeEEEEeeccChHHHHHHHHHHHCCCEEEEechhhcCCCHHHHHHHHHHHHHHCCcEEechh
Confidence 99999999999999999999999999999999999999999999999999999999999999999 788888764
No 11
>3irv_A Cysteine hydrolase; structural genomics, PSI-2, protein structure initiative, CY hydrolase; 1.60A {Pseudomonas syringae PV}
Probab=100.00 E-value=5.2e-39 Score=296.35 Aligned_cols=186 Identities=24% Similarity=0.349 Sum_probs=163.8
Q ss_pred ccCCCCeEEEEecccccccC--CCccccccccCCChHHHHHHHHHHHHHhccC--cEEEEeccCCCCccchhhhhhhhhc
Q psy8942 31 VIVRPKSALLVINVQNDFVS--GTLNMSQRSAKQNGLQVIEPINKLLDTVNFN--AVFYSLDWHPSNHISFIDNIKLRKI 106 (340)
Q Consensus 31 ~i~~~ktALLVIDmQndF~~--G~l~~~~~~~~~~~~~iv~~I~~Li~~aR~~--~Vi~t~d~h~~~h~~f~~~~~~r~~ 106 (340)
.+++.++|||||||||+|++ |.+.. ++.+++++++++|+++||.. +|||++++|+.....+.
T Consensus 17 ~l~~~~tALlvID~Q~~f~~~~g~l~~------~~~~~vv~~i~~Ll~~ar~~g~pVi~t~~~~~~~~~~~~-------- 82 (233)
T 3irv_A 17 PINPLRTAVIVVDMQKVFCEPTGALYV------KSTADIVQPIQKLLQAARAAQVMVIYLRHIVRGDGSDTG-------- 82 (233)
T ss_dssp CCCGGGEEEEEECCBHHHHSTTSTTCC------GGGGGGHHHHHHHHHHHHHTTCEEEEEEECBCSSSTTCS--------
T ss_pred CCCCCCeEEEEECCchhhhCCCCcccC------CCHHHHHHHHHHHHHHHHHcCCeEEEEEeecCCCccchh--------
Confidence 57888999999999999996 45543 57899999999999999874 89999988764321110
Q ss_pred cCCCCCCCCCccccccccccCCCccccccCCc---cccCCCCcccccccccccCCceEEEcCCCCCCCcccccccccccC
Q psy8942 107 HYTSTVQPEDAQTYDTVVFDGDTPMKQKLWPR---HCVQDSWGAELHKDLKIVDNAIKVYMGTDPEEDSYSVFWDSKKLK 183 (340)
Q Consensus 107 ~p~s~l~~~~~~~~~~v~~~g~~~~~~~~wp~---hc~~Gt~g~el~~eL~p~~~d~vi~K~~~p~~~r~SaF~~~~~~~ 183 (340)
. ....||+ ||.+|++|++++++|.|.++|.+|.| .+||+|+
T Consensus 83 ------------~------------~~~~~p~~~~~~~~gt~g~ei~~~l~p~~~d~vi~K------~~~saF~------ 126 (233)
T 3irv_A 83 ------------R------------MRDLYPNVDQILARHDPDVEVIEALAPQSDDVIVDK------LFYSGFH------ 126 (233)
T ss_dssp ------------H------------HHHHSTTHHHHSBTTCGGGSBCGGGCCCTTSEEEEE------SSSCSST------
T ss_pred ------------h------------hhhhcCcccccccCCCCccccchhhCCCCCCEEEEC------CccCCCc------
Confidence 0 0135775 89999999999999999999999999 4899998
Q ss_pred CchHHHHHHhCCCcEEEEEeecCChhHHHHHHHHHhCCCeEEEECCCCCCC-----------CHHHHHHHHHHHHhcCcE
Q psy8942 184 RTSLAKQLEAKKVTDVYVCGLAYDVCVGASAIDAITIGYRTILIEDCCRGM-----------DLDDIERTRNTILENYGS 252 (340)
Q Consensus 184 ~t~L~~~L~~~gi~~lii~Gv~T~~CV~~Ta~dA~~~Gy~V~vv~Da~~s~-----------~~~~~~~al~~l~~~g~~ 252 (340)
+|+|+++|+++|+++|+|||+.|++||.+||++|+++||+|+|++|||+++ +++.|+.+|+.|...|+.
T Consensus 127 ~t~L~~~L~~~gi~~lvi~G~~T~~CV~~Ta~dA~~~Gy~V~vv~Da~as~d~~~~~~~~~~~~~~h~~aL~~l~~~~a~ 206 (233)
T 3irv_A 127 NTDLDTVLRARDVDTIIVCGTVTNVCCETTIRDGVHREYKVIALSDANAAMDYPDVGFGAVSAADVQRISLTTIAYEFGE 206 (233)
T ss_dssp TSTHHHHHHHTTCCEEEEEEECTTTHHHHHHHHHHHTTCEEEEEEEEEECCCBCCSSSCCBCHHHHHHHHHHHHHHHTSE
T ss_pred CCcHHHHHHhCCCCeEEEEeecccHHHHHHHHHHHHCCCEEEEechhhccCcccccccccCChHHHHHHHHHHHHhcCcE
Confidence 999999999999999999999999999999999999999999999999998 588999999999999999
Q ss_pred EecHHHHHHHHhcC
Q psy8942 253 CVQSDEVKSMVEGK 266 (340)
Q Consensus 253 v~ts~ev~~~l~~~ 266 (340)
|+++++++.+|++.
T Consensus 207 V~tt~evl~~l~~~ 220 (233)
T 3irv_A 207 VTTTAEVIRRIESA 220 (233)
T ss_dssp EECHHHHHHHHHHH
T ss_pred EeEHHHHHHHHHhc
Confidence 99999999999864
No 12
>3lqy_A Putative isochorismatase hydrolase; structural genomics, PSI-2, PROT structure initiative, midwest center for structural genomic; 1.75A {Oleispira antarctica} SCOP: c.33.1.0
Probab=100.00 E-value=1e-38 Score=285.36 Aligned_cols=172 Identities=21% Similarity=0.267 Sum_probs=153.4
Q ss_pred cCCCCeEEEEecccccccC----CCccccccccCCChHHHHHHHHHHHHHhccC--cEEEEeccCCCCccchhhhhhhhh
Q psy8942 32 IVRPKSALLVINVQNDFVS----GTLNMSQRSAKQNGLQVIEPINKLLDTVNFN--AVFYSLDWHPSNHISFIDNIKLRK 105 (340)
Q Consensus 32 i~~~ktALLVIDmQndF~~----G~l~~~~~~~~~~~~~iv~~I~~Li~~aR~~--~Vi~t~d~h~~~h~~f~~~~~~r~ 105 (340)
++++++|||||||||+|++ |.++. ++.+++++++++|+++||.. +|++++++|+.
T Consensus 3 ~~~~~~aLlvID~Q~~f~~~~~~g~l~~------~~~~~~i~~i~~l~~~ar~~g~pVi~t~~~~~~------------- 63 (190)
T 3lqy_A 3 TTENTTALLLIDFQNDYFSTYNGAKNPL------VGTEAAAEQGAKLLAKFRQQGLPVVHVRHEFPT------------- 63 (190)
T ss_dssp CCSCCEEEEEECCBGGGCTTSTTCSSCC------BTHHHHHHHHHHHHHHHHHTTCCEEEEEECC-C-------------
T ss_pred CCCCCEEEEEEcCchhhhCcCCCCccCc------CCHHHHHHHHHHHHHHHHHCCCeEEEEEEecCC-------------
Confidence 5778999999999999995 45543 57899999999999999874 89999875431
Q ss_pred ccCCCCCCCCCccccccccccCCCccccccCCccccCCCCcccccccccccCCceEEEcCCCCCCCcccccccccccCCc
Q psy8942 106 IHYTSTVQPEDAQTYDTVVFDGDTPMKQKLWPRHCVQDSWGAELHKDLKIVDNAIKVYMGTDPEEDSYSVFWDSKKLKRT 185 (340)
Q Consensus 106 ~~p~s~l~~~~~~~~~~v~~~g~~~~~~~~wp~hc~~Gt~g~el~~eL~p~~~d~vi~K~~~p~~~r~SaF~~~~~~~~t 185 (340)
.+++||.+|++|++++++|+|.++|.+|.| .+||+|+ +|
T Consensus 64 -----------------------------~~~~~~~~gt~g~~i~~~l~~~~~~~vi~K------~~~saF~------~t 102 (190)
T 3lqy_A 64 -----------------------------DEAPFFLPGSDGAKIHPSVAAQEGEAVVLK------HQINSFR------DT 102 (190)
T ss_dssp -----------------------------TTCSSSCTTCGGGSBCGGGCCCTTSCEEEE------SSSSTTT------TS
T ss_pred -----------------------------CCCCcccCCCCccccCcccCCCCCCEEEEC------CCCCccc------cc
Confidence 134678999999999999999999999999 4899998 99
Q ss_pred hHHHHHHhCCCcEEEEEeecCChhHHHHHHHHHhCCCeEEEECCCCCCCCH----------HHHHHHHHHHHhcCcEEec
Q psy8942 186 SLAKQLEAKKVTDVYVCGLAYDVCVGASAIDAITIGYRTILIEDCCRGMDL----------DDIERTRNTILENYGSCVQ 255 (340)
Q Consensus 186 ~L~~~L~~~gi~~lii~Gv~T~~CV~~Ta~dA~~~Gy~V~vv~Da~~s~~~----------~~~~~al~~l~~~g~~v~t 255 (340)
+|+.+|+++|+++|+|+|+.||+||.+||++|+++||+|+|++|||++++. +.|+.+|..|...++.|++
T Consensus 103 ~L~~~L~~~gi~~lii~G~~T~~CV~~Ta~da~~~Gy~v~vv~Da~~s~~~~~~~~~~~a~~~h~~~L~~l~~~~a~V~t 182 (190)
T 3lqy_A 103 DLKKVLDDAGIKKLVIVGAMTHMAIDAVTRAAEDLGYECAVAHDACATLDLEFNGITVPAAQVHAAFMSALSFAYANVAS 182 (190)
T ss_dssp SHHHHHHHC-CCEEEEEEECTTTHHHHHHHHHHHHTCEEEEEEEEEEBCCEEETTEEECHHHHHHHHHHHHBTTTBEEEC
T ss_pred hHHHHHHhCCCCEEEEEecCcChHHHHHHHHHHHCCCEEEEechhhccCCccccCccCCHHHHHHHHHHHHhhCcEEEEE
Confidence 999999999999999999999999999999999999999999999999995 7899999999999999999
Q ss_pred HHHHHHHH
Q psy8942 256 SDEVKSMV 263 (340)
Q Consensus 256 s~ev~~~l 263 (340)
+++++.+|
T Consensus 183 t~~~l~~l 190 (190)
T 3lqy_A 183 ADELIAGL 190 (190)
T ss_dssp HHHHHTC-
T ss_pred HHHHHhhC
Confidence 99998754
No 13
>1j2r_A Hypothetical isochorismatase family protein YECD; parallel beta-sheet 3-2-1-4-5-6, alpha-beta-alpha motif, TET structural genomics; 1.30A {Escherichia coli} SCOP: c.33.1.3
Probab=100.00 E-value=6.1e-38 Score=281.70 Aligned_cols=185 Identities=17% Similarity=0.307 Sum_probs=156.9
Q ss_pred hccCCCCeEEEEecccccccCCCccccccccCCChHHHHHHHHHHHHHhccC--cEEEEeccCCCCccchhhhhhhhhcc
Q psy8942 30 KVIVRPKSALLVINVQNDFVSGTLNMSQRSAKQNGLQVIEPINKLLDTVNFN--AVFYSLDWHPSNHISFIDNIKLRKIH 107 (340)
Q Consensus 30 ~~i~~~ktALLVIDmQndF~~G~l~~~~~~~~~~~~~iv~~I~~Li~~aR~~--~Vi~t~d~h~~~h~~f~~~~~~r~~~ 107 (340)
..++++++|||||||||+|+++... .++.+++++++++|++++|.. +|+++++-|++++..+..
T Consensus 13 ~~l~~~~~ALlvID~Q~~f~~~~~~------~~~~~~~i~~i~~ll~~ar~~g~pVi~t~~~~~~~~~~~~~-------- 78 (199)
T 1j2r_A 13 LELNAKTTALVVIDLQEGILPFAGG------PHTADEVVNRAGKLAAKFRASGQPVFLVRVGWSADYAEALK-------- 78 (199)
T ss_dssp CCCCGGGEEEEEECCSTTTGGGCCB------SSCHHHHHHHHHHHHHHHHHTTCCEEEEEECCCTTCTTSCC--------
T ss_pred eecCCCCeEEEEEecchhhhCCCcc------cccHHHHHHHHHHHHHHHHHcCCcEEEEEeeeCCCcccccc--------
Confidence 4578889999999999999974322 257899999999999999874 899999323332211100
Q ss_pred CCCCCCCCCccccccccccCCCccccccCCccccCCCCcccccccccccCCceEEEcCCCCCCCcccccccccccCCchH
Q psy8942 108 YTSTVQPEDAQTYDTVVFDGDTPMKQKLWPRHCVQDSWGAELHKDLKIVDNAIKVYMGTDPEEDSYSVFWDSKKLKRTSL 187 (340)
Q Consensus 108 p~s~l~~~~~~~~~~v~~~g~~~~~~~~wp~hc~~Gt~g~el~~eL~p~~~d~vi~K~~~p~~~r~SaF~~~~~~~~t~L 187 (340)
. .....||.||..++++ +++++|.|.++|.+|.|+ +||+|+ +|+|
T Consensus 79 -------------------~---~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~vi~K~------~~saF~------~t~L 123 (199)
T 1j2r_A 79 -------------------Q---PVDAPSPAKVLPENWW-QHPAALGTTDSDIEIIKR------QWGAFY------GTDL 123 (199)
T ss_dssp -------------------C---CCSSCCCCCCCCTTTT-CCCGGGCCCTTSEEEEES------SSSSST------TSSH
T ss_pred -------------------C---cccccCCCcCcCCChh-HhChhhCCCCCCEEEeCC------CcCCcC------CCCH
Confidence 0 0123588899776654 999999998889999994 899998 9999
Q ss_pred HHHHHhCCCcEEEEEeecCChhHHHHHHHHHhCCCeEEEECCCCCCCCHHHHHHHHHHHHhcCcEEecHHHHHHHH
Q psy8942 188 AKQLEAKKVTDVYVCGLAYDVCVGASAIDAITIGYRTILIEDCCRGMDLDDIERTRNTILENYGSCVQSDEVKSMV 263 (340)
Q Consensus 188 ~~~L~~~gi~~lii~Gv~T~~CV~~Ta~dA~~~Gy~V~vv~Da~~s~~~~~~~~al~~l~~~g~~v~ts~ev~~~l 263 (340)
+.+|+++|+++|+|+|+.||+||.+||++|+++||+|+|++|||++++++.|+.+++.|...|+.|+++++++.+|
T Consensus 124 ~~~L~~~gi~~lvi~G~~T~~CV~~Ta~da~~~Gy~v~vv~Da~as~~~~~h~~al~~~~~~~~~v~~t~~~l~~l 199 (199)
T 1j2r_A 124 ELQLRRRGIDTIVLCGISTNIGVESTARNAWELGFNLVIAEDACSAASAEQHNNSINHIYPRIARVRSVEEILNAL 199 (199)
T ss_dssp HHHHHHTTCCEEEEEEECTTTHHHHHHHHHHHTTCEEEEEEEEEEBSSHHHHHHHHHHTHHHHSEEECHHHHHHHC
T ss_pred HHHHHHCCCCEEEEEeeeccHHHHHHHHHHHHCCCEEEEehhhcCCCCHHHHHHHHHHHHHheeEEeeHHHHHhhC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999998764
No 14
>3kl2_A Putative isochorismatase; structural genomics, unknown function, PSI-2, protein struct initiative; 2.30A {Streptomyces avermitilis} SCOP: c.33.1.0
Probab=100.00 E-value=5.8e-39 Score=294.78 Aligned_cols=199 Identities=18% Similarity=0.271 Sum_probs=164.8
Q ss_pred hccCCCCeEEEEecccccccC--CCccccccccCCChHHHHHHHHHHHHHhcc--CcEEEEeccCCCCccchhhhhhhhh
Q psy8942 30 KVIVRPKSALLVINVQNDFVS--GTLNMSQRSAKQNGLQVIEPINKLLDTVNF--NAVFYSLDWHPSNHISFIDNIKLRK 105 (340)
Q Consensus 30 ~~i~~~ktALLVIDmQndF~~--G~l~~~~~~~~~~~~~iv~~I~~Li~~aR~--~~Vi~t~d~h~~~h~~f~~~~~~r~ 105 (340)
..+++.++|||||||||||++ |.+... ....++.+++++++++|+++||. .+||+++++|++.+..++.+
T Consensus 19 ~~l~~~~tALlVID~Qndf~~~~g~l~~~-~~~~~~~~~vv~~i~~Ll~~ar~~g~pVi~~~~~~~~~~~~~~~~----- 92 (226)
T 3kl2_A 19 LELDPARTAIVLIEYQNEFTSDGGVLHGA-VADVMQHTGMLANTVAVVDAARQAGVPIMHAPITFAEGYGELTRH----- 92 (226)
T ss_dssp CCCCGGGEEEEEECCBHHHHSTTCTTHHH-HHHHHHHHTHHHHHHHHHHHHHHHTCCEEEECCCBCTTCTTSCSS-----
T ss_pred ccCCCCCeEEEEEcCchhhhCCCcccccc-ccccccHHHHHHHHHHHHHHHHHcCCeEEEEEeeeCCCccccccc-----
Confidence 358889999999999999997 454310 00113478899999999999986 38999998887654332210
Q ss_pred ccCCCCCCCCCccccccccccCCCccccccCCccccCCCCcccccccccccCCceEEEcCCCCCCCcccccccccccCCc
Q psy8942 106 IHYTSTVQPEDAQTYDTVVFDGDTPMKQKLWPRHCVQDSWGAELHKDLKIVDNAIKVYMGTDPEEDSYSVFWDSKKLKRT 185 (340)
Q Consensus 106 ~~p~s~l~~~~~~~~~~v~~~g~~~~~~~~wp~hc~~Gt~g~el~~eL~p~~~d~vi~K~~~p~~~r~SaF~~~~~~~~t 185 (340)
+ +. ......||.||.+|++|++++++|+|.++|.+|.|. +.||+|+ +|
T Consensus 93 --~-----------~~--------~~~~~~~~~~~~~gt~g~ei~~~L~p~~~d~vi~Kk-----~~~SaF~------~t 140 (226)
T 3kl2_A 93 --P-----------YG--------ILKGVVDGKAFVKGTWGAAIVDELAPVNGDIVIEGK-----RGLDTFA------ST 140 (226)
T ss_dssp --C-----------CT--------HHHHHHHHTCSBTTSTTTSBCGGGCCCTTCEECCCC-----CSSSHHH------HS
T ss_pred --c-----------ch--------hhhcccCCCcccCCCcccccCHhhCCCCCCEEEecC-----CccCCcc------Cc
Confidence 0 00 011123788999999999999999999999999874 3599998 89
Q ss_pred hHHHHHHhCCCcEEEEEeecCChhHHHHHHHHHhCCCeEEEECCCCCCCCHHHHHHHHHHHHhcCcEEecHHHHHHHHhc
Q psy8942 186 SLAKQLEAKKVTDVYVCGLAYDVCVGASAIDAITIGYRTILIEDCCRGMDLDDIERTRNTILENYGSCVQSDEVKSMVEG 265 (340)
Q Consensus 186 ~L~~~L~~~gi~~lii~Gv~T~~CV~~Ta~dA~~~Gy~V~vv~Da~~s~~~~~~~~al~~l~~~g~~v~ts~ev~~~l~~ 265 (340)
+|+.+|+++|+++|+|||+.|++||.+||++|+++||+|+|++|||++++++.|+.+|+++.+.++.|++++|++.+|.+
T Consensus 141 ~L~~~L~~~gi~~lii~G~~T~~CV~~Ta~da~~~Gy~v~vv~Da~~s~~~~~h~~aL~~~~~~~a~v~tt~e~l~~~~~ 220 (226)
T 3kl2_A 141 NLDFILRSKGVDTIVLGGFLTNCCVESTMRTGYERGFRVITLTDCVAATSQEEHNNAISYDFPMFSVPMTSADVIAALEG 220 (226)
T ss_dssp SHHHHHHHHTCCEEEEEEECTTTHHHHHHHHHHHTTCEEEEEEEEEECSCHHHHHHHHHHTHHHHSEEECHHHHHHHHC-
T ss_pred hHHHHHhCCCCCcEEEeccCcchHHHHHHHHHHHCCCEEEEechhhcCCCHHHHHHHHHHHHHhceEEeeHHHHHHHhhc
Confidence 99999999999999999999999999999999999999999999999999999999999888889999999999999975
Q ss_pred C
Q psy8942 266 K 266 (340)
Q Consensus 266 ~ 266 (340)
-
T Consensus 221 ~ 221 (226)
T 3kl2_A 221 H 221 (226)
T ss_dssp -
T ss_pred c
Confidence 3
No 15
>1nf9_A Phenazine biosynthesis protein PHZD; isochorismatase, enzyme, phenazine pathway, hydrolase; HET: BOG; 1.50A {Pseudomonas aeruginosa} SCOP: c.33.1.3 PDB: 1nf8_A* 3r77_A*
Probab=100.00 E-value=2.9e-38 Score=285.81 Aligned_cols=179 Identities=16% Similarity=0.175 Sum_probs=157.1
Q ss_pred ccCCCCeEEEEecccccccCCCccccccccCCChHHHHHHHHHHHHHhcc--CcEEEEeccCCCCccchhhhhhhhhccC
Q psy8942 31 VIVRPKSALLVINVQNDFVSGTLNMSQRSAKQNGLQVIEPINKLLDTVNF--NAVFYSLDWHPSNHISFIDNIKLRKIHY 108 (340)
Q Consensus 31 ~i~~~ktALLVIDmQndF~~G~l~~~~~~~~~~~~~iv~~I~~Li~~aR~--~~Vi~t~d~h~~~h~~f~~~~~~r~~~p 108 (340)
.+++.++|||||||||+|+++.. . ++.+++++++++|+++||. .+|||++++|...... +.
T Consensus 26 ~l~~~~tALlvID~Q~~f~~~~~-~------~~~~~~i~~i~~l~~~ar~~g~pVi~t~~~~~~~~~~-------~~--- 88 (207)
T 1nf9_A 26 SLEPRRAVLLVHDMQRYFLRPLP-E------SLRAGLVANAARLRRWCVEQGVQIAYTAQPGSMTEEQ-------RG--- 88 (207)
T ss_dssp CCCGGGEEEEEESCBHHHHTTSC-H------HHHHHHHHHHHHHHHHHHHHTCEEEEEECCSSCCHHH-------HT---
T ss_pred ccCCCCeEEEEECChHHhcCCCC-c------ccHHHHHHHHHHHHHHHHHcCCeEEEEeecCCCChhh-------hh---
Confidence 46778999999999999997321 1 3578999999999999986 3899999876432100 00
Q ss_pred CCCCCCCCccccccccccCCCccccccCCccccCCCCcccccccccccCCceEEEcCCCCCCCcccccccccccCCchHH
Q psy8942 109 TSTVQPEDAQTYDTVVFDGDTPMKQKLWPRHCVQDSWGAELHKDLKIVDNAIKVYMGTDPEEDSYSVFWDSKKLKRTSLA 188 (340)
Q Consensus 109 ~s~l~~~~~~~~~~v~~~g~~~~~~~~wp~hc~~Gt~g~el~~eL~p~~~d~vi~K~~~p~~~r~SaF~~~~~~~~t~L~ 188 (340)
.....||+||..|++|++|+++|+|.++|.+|.| ++||+|+ +|+|+
T Consensus 89 ----------------------~~~~~~~~~~~~g~~g~~i~~~l~p~~~~~vi~K------~~~saF~------~t~L~ 134 (207)
T 1nf9_A 89 ----------------------LLKDFWGPGMRASPADREVVEELAPGPDDWLLTK------WRYSAFF------HSDLL 134 (207)
T ss_dssp ----------------------THHHHHTTCCCSSHHHHSBCGGGCCCTTSEEEEC------CSSSTTT------TSSHH
T ss_pred ----------------------hhhhhcCCCCCCCCchhhhchhhCCCCCCEEEec------CCCCCcC------CCcHH
Confidence 0124689999999999999999999989999999 5899998 99999
Q ss_pred HHHHhCCCcEEEEEeecCChhHHHHHHHHHhCCCeEEEECCCCCCCCHHHHHHHHHHHHhcCcEEecHHHHH
Q psy8942 189 KQLEAKKVTDVYVCGLAYDVCVGASAIDAITIGYRTILIEDCCRGMDLDDIERTRNTILENYGSCVQSDEVK 260 (340)
Q Consensus 189 ~~L~~~gi~~lii~Gv~T~~CV~~Ta~dA~~~Gy~V~vv~Da~~s~~~~~~~~al~~l~~~g~~v~ts~ev~ 260 (340)
.+|+++|+++|+|+|+.||+||.+||++|+++||+|+|++|||++++++.|+.+++.|...|+.|+++++++
T Consensus 135 ~~L~~~gi~~lvi~G~~T~~CV~~Ta~dA~~~Gy~V~vv~Da~as~~~~~h~~al~~~~~~~~~v~~t~~~l 206 (207)
T 1nf9_A 135 QRMRAAGRDQLVLCGVYAHVGVLISTVDAYSNDIQPFLVADAIADFSEAHHRMALEYAASRCAMVVTTDEVL 206 (207)
T ss_dssp HHHHHTTCCEEEEEEECTTTHHHHHHHHHHHTTCEEEEEEEEEECSSHHHHHHHHHHHHHHTCEEECHHHHH
T ss_pred HHHHHcCCCEEEEEeeecChHHHHHHHHHHHCCCEEEEeCcccCCCCHHHHHHHHHHHHHhCcEEccHHHHh
Confidence 999999999999999999999999999999999999999999999999999999999999999999999986
No 16
>3txy_A Isochorismatase family protein family; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.70A {Burkholderia thailandensis} SCOP: c.33.1.0
Probab=100.00 E-value=1e-37 Score=281.02 Aligned_cols=187 Identities=17% Similarity=0.220 Sum_probs=160.0
Q ss_pred hccCCCCeEEEEecccccccCCCccccccccCCChHHHHHHHHHHHHHhccC--cEEEEeccCCCCccchhhhhhhhhcc
Q psy8942 30 KVIVRPKSALLVINVQNDFVSGTLNMSQRSAKQNGLQVIEPINKLLDTVNFN--AVFYSLDWHPSNHISFIDNIKLRKIH 107 (340)
Q Consensus 30 ~~i~~~ktALLVIDmQndF~~G~l~~~~~~~~~~~~~iv~~I~~Li~~aR~~--~Vi~t~d~h~~~h~~f~~~~~~r~~~ 107 (340)
..+++ ++|||||||||+|+++.+. .++.+++++++++|+++||.. +|||+++.|.+++..+...
T Consensus 8 ~~l~~-~tALlvID~Q~~f~~~~~~------~~~~~~~i~~i~~Li~~ar~~g~pVi~t~~~~~~d~~~~~~~------- 73 (199)
T 3txy_A 8 PTLNP-TVALVAIDLQNGIVVLPMV------PQSGGDVVAKTAELANAFRARKLPVIFVHTSYQPDGAVALKV------- 73 (199)
T ss_dssp CCCCS-SEEEEEECCBHHHHTSCCB------SSCHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTSTTSCCC-------
T ss_pred cCcCC-CeEEEEEcCchhhhCCCcC------CCCHHHHHHHHHHHHHHHHHcCCcEEEEEeeecCCccccccc-------
Confidence 46788 9999999999999985442 257899999999999999874 8999998776543222110
Q ss_pred CCCCCCCCCccccccccccCCCccccccCCccccCCCCcccccccccccCCceEEEcCCCCCCCcccccccccccCCchH
Q psy8942 108 YTSTVQPEDAQTYDTVVFDGDTPMKQKLWPRHCVQDSWGAELHKDLKIVDNAIKVYMGTDPEEDSYSVFWDSKKLKRTSL 187 (340)
Q Consensus 108 p~s~l~~~~~~~~~~v~~~g~~~~~~~~wp~hc~~Gt~g~el~~eL~p~~~d~vi~K~~~p~~~r~SaF~~~~~~~~t~L 187 (340)
. ....|+.||.. +.+++++++|+|.++|.+|.| .+||+|+ +|+|
T Consensus 74 --------------------~---~~~~~~~~~~~-~~~~~i~~~L~~~~~~~vi~K------~~~saf~------~t~L 117 (199)
T 3txy_A 74 --------------------K---TDVPPSPPNLD-PEWSAFAPALGVQPLDVVVTK------HQWGAFT------GTDL 117 (199)
T ss_dssp --------------------C---CSSCCCCCCCC-HHHHSBCGGGCCCTTSEEEEE------SSSSSST------TSSH
T ss_pred --------------------c---ccCCCcccCCC-CcHHhhChhhCCCCCeEEEEC------CCcCccc------cCcH
Confidence 0 01125666654 446899999999999999999 4899998 9999
Q ss_pred HHHHHhCCCcEEEEEeecCChhHHHHHHHHHhCCCeEEEECCCCCCCCHHHHHHHHHHHHhcCcEEecHHHHHHHHhcC
Q psy8942 188 AKQLEAKKVTDVYVCGLAYDVCVGASAIDAITIGYRTILIEDCCRGMDLDDIERTRNTILENYGSCVQSDEVKSMVEGK 266 (340)
Q Consensus 188 ~~~L~~~gi~~lii~Gv~T~~CV~~Ta~dA~~~Gy~V~vv~Da~~s~~~~~~~~al~~l~~~g~~v~ts~ev~~~l~~~ 266 (340)
+.+|+++|+++|+|+|+.||+||.+||++|+++||+|+|++|||++++++.|+.++++|.+.|+.|+++++++.+|++.
T Consensus 118 ~~~L~~~gi~~lvi~G~~t~~CV~~Ta~~a~~~G~~v~v~~Da~~~~~~~~~~~al~~~~~~~~~v~tt~~~l~~l~~~ 196 (199)
T 3txy_A 118 DVQLRRRGITDIVLTGIATNIGVESTAREAYENNYNVVVVSDAVSTWSTDAQTFALTQIFPKLGQVATAADVEAALETQ 196 (199)
T ss_dssp HHHHHHTTCCEEEEEEECTTTHHHHHHHHHHHTTCEEEEEEEEEEBSCHHHHHHHHHHTHHHHSEEECHHHHHHHHHC-
T ss_pred HHHHHhCCCCEEEEEeeccCHHHHHHHHHHHHCCCEEEEecHhhcCCCHHHHHHHHHHHHhhceEEeeHHHHHHHHhcc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999864
No 17
>3mcw_A Putative hydrolase; isochorismatase family, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.06A {Chromobacterium violaceum}
Probab=100.00 E-value=8.2e-38 Score=281.52 Aligned_cols=176 Identities=16% Similarity=0.142 Sum_probs=156.0
Q ss_pred ccCCCCeEEEEecccccccCCCccccccccCCChHHHHHHHHHHHHHhcc--CcEEEEeccCCCCccchhhhhhhhhccC
Q psy8942 31 VIVRPKSALLVINVQNDFVSGTLNMSQRSAKQNGLQVIEPINKLLDTVNF--NAVFYSLDWHPSNHISFIDNIKLRKIHY 108 (340)
Q Consensus 31 ~i~~~ktALLVIDmQndF~~G~l~~~~~~~~~~~~~iv~~I~~Li~~aR~--~~Vi~t~d~h~~~h~~f~~~~~~r~~~p 108 (340)
.++++++|||||||||+|+++.+.. ++.+++++++++|++.||. .+|||++++|+..+
T Consensus 7 ~~~~~~~ALlvID~Q~~f~~~~~~~------~~~~~~i~~i~~l~~~ar~~g~pVi~~~~~~~~~~-------------- 66 (198)
T 3mcw_A 7 RFSSDKPLLLLIDMQQAVDDPSWGP------RNHPQAEQACAGLLQAWRARGLPLIHIRHDSVEPN-------------- 66 (198)
T ss_dssp CCSSSCCEEEEECCBGGGGSGGGCC------BSCTTHHHHHHHHHHHHHHHTCCEEEEEECCCCTT--------------
T ss_pred ccCCCCCEEEEEeCchhhcCCCccc------cChHHHHHHHHHHHHHHHHCCCEEEEEEEecCCCC--------------
Confidence 4788999999999999999854322 4678899999999999986 38999997653210
Q ss_pred CCCCCCCCccccccccccCCCccccccCCccccCCCCcccccccccccCCceEEEcCCCCCCCcccccccccccCCchHH
Q psy8942 109 TSTVQPEDAQTYDTVVFDGDTPMKQKLWPRHCVQDSWGAELHKDLKIVDNAIKVYMGTDPEEDSYSVFWDSKKLKRTSLA 188 (340)
Q Consensus 109 ~s~l~~~~~~~~~~v~~~g~~~~~~~~wp~hc~~Gt~g~el~~eL~p~~~d~vi~K~~~p~~~r~SaF~~~~~~~~t~L~ 188 (340)
..+| .|++|++++++|+|.++|.+|.| .+||+|+ +|+|+
T Consensus 67 ------------------------~~~~-----~g~~g~~i~~~l~~~~~~~vi~K------~~~saF~------~t~L~ 105 (198)
T 3mcw_A 67 ------------------------STYR-----PGQPGHAFKPEVEPRPGETVIAK------QTNSAFI------GTGLE 105 (198)
T ss_dssp ------------------------CTTC-----TTSGGGSBCGGGCCCTTCEEEEE------SSSSTTT------TSSHH
T ss_pred ------------------------CCCC-----CcCCccccCcccCCCCCCEEEEc------CccCccc------cchHH
Confidence 0123 48999999999999999999999 4899998 99999
Q ss_pred HHHHhCCCcEEEEEeecCChhHHHHHHHHHhCCCeEEEECCCCCCCCH-----------HHHHHHHHHHHhcCcEEecHH
Q psy8942 189 KQLEAKKVTDVYVCGLAYDVCVGASAIDAITIGYRTILIEDCCRGMDL-----------DDIERTRNTILENYGSCVQSD 257 (340)
Q Consensus 189 ~~L~~~gi~~lii~Gv~T~~CV~~Ta~dA~~~Gy~V~vv~Da~~s~~~-----------~~~~~al~~l~~~g~~v~ts~ 257 (340)
.+|+++|+++|+|+|+.||+||.+||++|+++||+|+|++|||++++. +.|+.+|+.|.+.++.|++++
T Consensus 106 ~~L~~~gi~~lvi~G~~T~~CV~~Ta~da~~~Gy~v~vv~Da~~s~~~~~~~g~~~~~~~~h~~al~~l~~~~a~v~tt~ 185 (198)
T 3mcw_A 106 ALLRANGWLELVVAGVSTSNSVEATVRMAGNLGFAVCLAEDGCFTFDKTDWHGRRRSADEVHAMSLANLDGEYCRVCGSA 185 (198)
T ss_dssp HHHHHHTCCEEEEEEECTTTHHHHHHHHHHHTTCEEEEEEEEEECBCEECTTSCEECHHHHHHHHHHHHBTTTBEEECHH
T ss_pred HHHHcCCCCeEEEEEcCcChHHHHHHHHHHHCCCEEEEeCcccccccccccccccCCHHHHHHHHHHHHHhccEEEeeHH
Confidence 999999999999999999999999999999999999999999999986 899999999999999999999
Q ss_pred HHHHHHhcCC
Q psy8942 258 EVKSMVEGKD 267 (340)
Q Consensus 258 ev~~~l~~~~ 267 (340)
+++.+|.+.+
T Consensus 186 ~~l~~l~~~a 195 (198)
T 3mcw_A 186 DILAALGNIA 195 (198)
T ss_dssp HHHHHHTTTG
T ss_pred HHHHHHHHhh
Confidence 9999998654
No 18
>3oqp_A Putative isochorismatase; catalytic triad, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; 1.22A {Burkholderia xenovorans}
Probab=100.00 E-value=3.3e-37 Score=280.47 Aligned_cols=176 Identities=22% Similarity=0.292 Sum_probs=156.3
Q ss_pred CCCCeEEEEecccccccCCCccccccccCCChHHHHHHHHHHHHHhcc--CcEEEEeccCCCCccchhhhhhhhhccCCC
Q psy8942 33 VRPKSALLVINVQNDFVSGTLNMSQRSAKQNGLQVIEPINKLLDTVNF--NAVFYSLDWHPSNHISFIDNIKLRKIHYTS 110 (340)
Q Consensus 33 ~~~ktALLVIDmQndF~~G~l~~~~~~~~~~~~~iv~~I~~Li~~aR~--~~Vi~t~d~h~~~h~~f~~~~~~r~~~p~s 110 (340)
.+.++|||||||||+|++|.++. ..++.+++++++++|++++|. .+|||++++||..+
T Consensus 3 ~~~~tALlvID~Q~~f~~~~~~~----~~~~~~~~i~~i~~Ll~~ar~~g~pVi~t~~~~p~~~---------------- 62 (211)
T 3oqp_A 3 TTPRRALIVIDVQNEYVTGDLPI----EYPDVQSSLANIARAMDAARAAGVPVVIVQNFAPAGS---------------- 62 (211)
T ss_dssp CCCCEEEEEECCBGGGTTSSSCC----CBSCHHHHHHHHHHHHHHHHHHTCCEEEEEECBCTTC----------------
T ss_pred CCCCEEEEEEcCCHhhcCCcccc----CCcCHHHHHHHHHHHHHHHHHCCCeEEEEEecCCCCC----------------
Confidence 56899999999999999865432 125789999999999999986 38999997654321
Q ss_pred CCCCCCccccccccccCCCccccccCCccccCCCCcccccccccccCCceEEEcCCCCCCCcccccccccccCCchHHHH
Q psy8942 111 TVQPEDAQTYDTVVFDGDTPMKQKLWPRHCVQDSWGAELHKDLKIVDNAIKVYMGTDPEEDSYSVFWDSKKLKRTSLAKQ 190 (340)
Q Consensus 111 ~l~~~~~~~~~~v~~~g~~~~~~~~wp~hc~~Gt~g~el~~eL~p~~~d~vi~K~~~p~~~r~SaF~~~~~~~~t~L~~~ 190 (340)
++|..|++|++++++|.|.++|.+|.| ++||+|+ +|+|+.+
T Consensus 63 ---------------------------~~~~~gs~g~~i~~~l~~~~~d~vi~K------~~~saF~------~t~L~~~ 103 (211)
T 3oqp_A 63 ---------------------------PLFARGSNGAELHPVVSERARDHYVEK------SLPSAFT------GTDLAGW 103 (211)
T ss_dssp ---------------------------SSSBTTSGGGSBCHHHHTSCCSEEEEE------SSSCSST------TSSHHHH
T ss_pred ---------------------------ccccCCCCccccccccCCCCCcEEEEC------CccCCCc------ccHHHHH
Confidence 124578999999999999999999999 4899998 9999999
Q ss_pred HHhCCCcEEEEEeecCChhHHHHHHHHHhCCCeEEEECCCCCCCC----------HHHHHHHHHHHHhcCcEEecHHHHH
Q psy8942 191 LEAKKVTDVYVCGLAYDVCVGASAIDAITIGYRTILIEDCCRGMD----------LDDIERTRNTILENYGSCVQSDEVK 260 (340)
Q Consensus 191 L~~~gi~~lii~Gv~T~~CV~~Ta~dA~~~Gy~V~vv~Da~~s~~----------~~~~~~al~~l~~~g~~v~ts~ev~ 260 (340)
|+++|+++|+|+|+.||+||.+||++|+++||+|+|++|||++++ ++.|+.++..|.+.++.|+++++++
T Consensus 104 L~~~gi~~lvi~G~~T~~CV~~Ta~dA~~~Gy~V~vv~Da~as~~~~~~~g~~~a~~~h~~~l~~l~~~~a~V~tt~e~l 183 (211)
T 3oqp_A 104 LAARQIDTLTVTGYMTHNCDASTINHAVHSGLAVEFLHDATGSVPYENSAGFASAEEIHRVFSVVLQSRFAAVASTDEWI 183 (211)
T ss_dssp HHTTTCCEEEEEEECTTTHHHHHHHHHHHTTCEEEEEEEEEEBCCEEETTEEECHHHHHHHHHHHHHHHTCEEECHHHHH
T ss_pred HHhCCCCEEEEEeeccCHHHHHHHHHHHHCCCeEEEechheeccccccccCCCCHHHHHHHHHHHHHhccEEEeEHHHHH
Confidence 999999999999999999999999999999999999999999997 6789999999999999999999999
Q ss_pred HHHhcCC
Q psy8942 261 SMVEGKD 267 (340)
Q Consensus 261 ~~l~~~~ 267 (340)
.+|.+..
T Consensus 184 ~~l~~~~ 190 (211)
T 3oqp_A 184 AAVQGGT 190 (211)
T ss_dssp HHHHHTC
T ss_pred HHHhcCC
Confidence 9998654
No 19
>3ot4_A Putative isochorismatase; NICF, maleamate hydrolase, hydrol; 2.40A {Bordetella bronchiseptica} PDB: 3uao_A
Probab=100.00 E-value=1.1e-37 Score=288.14 Aligned_cols=192 Identities=20% Similarity=0.250 Sum_probs=160.8
Q ss_pred hhhh-hccCCCCeEEEEecccccccCCCccccccccCCChHHHHHHHHHHHHHhccC--cEEEEeccCCCCccchhhhhh
Q psy8942 26 NRWI-KVIVRPKSALLVINVQNDFVSGTLNMSQRSAKQNGLQVIEPINKLLDTVNFN--AVFYSLDWHPSNHISFIDNIK 102 (340)
Q Consensus 26 ~~~~-~~i~~~ktALLVIDmQndF~~G~l~~~~~~~~~~~~~iv~~I~~Li~~aR~~--~Vi~t~d~h~~~h~~f~~~~~ 102 (340)
+.+. +...++++|||||||||+|+++... ..++.+++++++++|+++||.. ||||++++|+.++...
T Consensus 33 ~g~~~~~~~~~~tALlVID~Qn~f~~~~~~-----~~~~~~~vv~~i~~Ll~~aR~~g~pVI~t~~~~~~~~~~~----- 102 (236)
T 3ot4_A 33 QGFGAALPLKAPYGLLIVDFVNGFADPAQF-----GGGNIAAAIETTRTVLAAARERGWAVAHSRIVYADDDADG----- 102 (236)
T ss_dssp TTCCCCCCCCSSEEEEEECCBHHHHSTTTS-----CCSSHHHHHHHHHHHHHHHHHHTCEEEEEEECBCTTCTTC-----
T ss_pred cCCCCCCCCCCCeEEEEEeCchhhcCCCCc-----cccCHHHHHHHHHHHHHHHHHcCCeEEEEEeccCCCcccc-----
Confidence 3443 4467789999999999999974221 1256899999999999999863 8999998886543110
Q ss_pred hhhccCCCCCCCCCccccccccccCCCccccccCC--ccccCCCCcccccccccccCCceEEEcCCCCCCCccccccccc
Q psy8942 103 LRKIHYTSTVQPEDAQTYDTVVFDGDTPMKQKLWP--RHCVQDSWGAELHKDLKIVDNAIKVYMGTDPEEDSYSVFWDSK 180 (340)
Q Consensus 103 ~r~~~p~s~l~~~~~~~~~~v~~~g~~~~~~~~wp--~hc~~Gt~g~el~~eL~p~~~d~vi~K~~~p~~~r~SaF~~~~ 180 (340)
+.|. ..|| .||++||+|++++|+|+|.++|.+|.|+ +||+|+
T Consensus 103 ---------------~~~~------------~~~~~~~~~~~gt~g~ei~~eL~p~~~d~vi~K~------~~saF~--- 146 (236)
T 3ot4_A 103 ---------------NIFS------------IKVPGMLTLKEHAPASAIVPQLAPQAGEYVVRKS------TPSAFY--- 146 (236)
T ss_dssp ---------------CHHH------------HHSGGGTTCBTTCGGGSBCGGGCCCTTCEEEEES------SSSTTT---
T ss_pred ---------------chhh------------hcCCccccccCCCCccccCHhhcccCCceEEECC------ccCccc---
Confidence 0110 1123 5899999999999999999999999994 899998
Q ss_pred ccCCchHHHHHHhCCCcEEEEEeecCChhHHHHHHHHHhCCCeEEEECCCCCCCCHHHHHHHHHHHHhcCcEEecHHHHH
Q psy8942 181 KLKRTSLAKQLEAKKVTDVYVCGLAYDVCVGASAIDAITIGYRTILIEDCCRGMDLDDIERTRNTILENYGSCVQSDEVK 260 (340)
Q Consensus 181 ~~~~t~L~~~L~~~gi~~lii~Gv~T~~CV~~Ta~dA~~~Gy~V~vv~Da~~s~~~~~~~~al~~l~~~g~~v~ts~ev~ 260 (340)
+|+|+.+|+++|+++|+|||++|++||.+||++|+++||+|+|++|||++++++.|+.+|+.|.+.|+.|+++++++
T Consensus 147 ---~t~L~~~L~~~gi~~lvi~G~~T~~CV~~Ta~da~~~Gy~V~vv~Da~as~~~~~h~~aL~~m~~~~a~v~tt~evl 223 (236)
T 3ot4_A 147 ---GTMLAAWLAQRGVQTLLVAGATTSGCVRASVVDAMSAGFRPLVLSDCVGDRALGPHEANLFDMRQKYAAVMTHDEAL 223 (236)
T ss_dssp ---TSSHHHHHHHTTCCEEEEEESCTTTHHHHHHHHHHHHTCEEEEEEEEECCSCHHHHHHHHHHHHHHTSEEECHHHHH
T ss_pred ---CchHHHHHHHCCCCEEEEeCccCcHHHHHHHHHHHHCCCEEEEechhcCCCCHHHHHHHHHHHHhcCCEEeeHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcC
Q psy8942 261 SMVEGK 266 (340)
Q Consensus 261 ~~l~~~ 266 (340)
.+|.+.
T Consensus 224 ~~L~~~ 229 (236)
T 3ot4_A 224 AKTKGL 229 (236)
T ss_dssp C-----
T ss_pred HHHHhc
Confidence 888753
No 20
>1yac_A Ycacgp, YCAC gene product; unknown bacterial hydrolase, three layer alpha-beta-alpha SA topology, ENTB homolog, cshase homolog; 1.80A {Escherichia coli} SCOP: c.33.1.3
Probab=100.00 E-value=6.2e-37 Score=277.86 Aligned_cols=198 Identities=14% Similarity=0.157 Sum_probs=169.8
Q ss_pred hccCCCCeEEEEecccccccCCCccccccccCCChHHHHHHHHHHHHHhccC--cEEEEeccCCCCccchhhhhhhhhcc
Q psy8942 30 KVIVRPKSALLVINVQNDFVSGTLNMSQRSAKQNGLQVIEPINKLLDTVNFN--AVFYSLDWHPSNHISFIDNIKLRKIH 107 (340)
Q Consensus 30 ~~i~~~ktALLVIDmQndF~~G~l~~~~~~~~~~~~~iv~~I~~Li~~aR~~--~Vi~t~d~h~~~h~~f~~~~~~r~~~ 107 (340)
..+++.++|||||||||+|+++. . ..+.+++++++++|++.+|.. ||++++++++
T Consensus 6 ~~l~~~~tALlvID~Q~~f~~~~-~------~~~~~~~i~~i~~l~~~ar~~g~pVi~t~~~~~---------------- 62 (208)
T 1yac_A 6 VRLDKNDAAVLLVDHQAGLLSLV-R------DIEPDKFKNNVLALGDLAKYFNLPTILTTSAET---------------- 62 (208)
T ss_dssp CCCCTTSEEEEEECCBTTGGGGC-C------SSCHHHHHHHHHHHHHHHHHTTCCEEEEEESTT----------------
T ss_pred ccCCCCCeEEEEEcCchhhhccc-c------cccHHHHHHHHHHHHHHHHHcCCcEEEEEecCC----------------
Confidence 45788999999999999999741 1 135789999999999999864 8999984210
Q ss_pred CCCCCCCCCccccccccccCCCccccccCCccccCCCCcccccccccc-cCCceEEEcCCCCCCCcccccccccccCCch
Q psy8942 108 YTSTVQPEDAQTYDTVVFDGDTPMKQKLWPRHCVQDSWGAELHKDLKI-VDNAIKVYMGTDPEEDSYSVFWDSKKLKRTS 186 (340)
Q Consensus 108 p~s~l~~~~~~~~~~v~~~g~~~~~~~~wp~hc~~Gt~g~el~~eL~p-~~~d~vi~K~~~p~~~r~SaF~~~~~~~~t~ 186 (340)
.++++++|+|.+ .+++.++.|. .+||+|+ +|+
T Consensus 63 ------------------------------------~~~~~~~~~l~~~~~~~~vi~K~-----~~~saF~------~t~ 95 (208)
T 1yac_A 63 ------------------------------------GPNGPLVPELKAQFPDAPYIARP-----GNINAWD------NED 95 (208)
T ss_dssp ------------------------------------TTTCCBCHHHHHHCTTSCEEEES-----SCSSGGG------SHH
T ss_pred ------------------------------------CCCCcccHHHHhhCCCCeEEeeC-----CccCCCC------Cch
Confidence 023456677765 3567788873 3799998 999
Q ss_pred HHHHHHhCCCcEEEEEeecCChhHHHHHHHHHhCCCeEEEECCCCCCCCHHHHHHHHHHHHhcCcEEecHHHHHHHHhcC
Q psy8942 187 LAKQLEAKKVTDVYVCGLAYDVCVGASAIDAITIGYRTILIEDCCRGMDLDDIERTRNTILENYGSCVQSDEVKSMVEGK 266 (340)
Q Consensus 187 L~~~L~~~gi~~lii~Gv~T~~CV~~Ta~dA~~~Gy~V~vv~Da~~s~~~~~~~~al~~l~~~g~~v~ts~ev~~~l~~~ 266 (340)
|+.+|+++|+++|+|||+.||+||.+||++|+++||+|+|++|||++++++.|+.++++|...|+.|+++++++.+|.++
T Consensus 96 L~~~L~~~gi~~lvi~Gv~T~~CV~~Ta~dA~~~Gy~V~vv~Da~as~~~~~h~~al~~m~~~g~~v~~t~~~l~~l~~~ 175 (208)
T 1yac_A 96 FVKAVKATGKKQLIIAGVVTEVCVAFPALSAIEEGFDVFVVTDASGTFNEITRHSAWDRMSQAGAQLMTWFGVACELHRD 175 (208)
T ss_dssp HHHHHHHTTCSEEEEEEBSCCCCCHHHHHHHHHTTCEEEEETTSCBCSSHHHHHHHHHHHHHHTCEEECHHHHHHHHHCC
T ss_pred HHHHHHhcCCCEEEEEEeccchhHHHHHHHHHHCCCEEEEECcccCCCCHHHHHHHHHHHHHcCCEEeeHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCchhhHHHHHHHHHhhcccchhhhhhccchhhH
Q psy8942 267 DRRPELGLKLALELKAKCIGSLYVRVIESNNSTSQ 301 (340)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~ 301 (340)
|.+ +|. ++....++ +++.|..+++||.....
T Consensus 176 ~~~-~fk-~~~~l~k~--~~~~~~~~~~~~~~~~~ 206 (208)
T 1yac_A 176 WRN-DIA-GLATLFSN--HIPDYRNLMTSYDTLTK 206 (208)
T ss_dssp GGG-CHH-HHHHHHHH--HCHHHHHHHHHHHHHC-
T ss_pred hhh-hHH-HHHHHHHH--HhhHHHHHHHHHHHHhc
Confidence 888 765 67777777 88899999999987654
No 21
>4h17_A Hydrolase, isochorismatase family; rossmann-like fold, structural genomics, joint center for ST genomics, JCSG; 1.60A {Pseudomonas putida KT2440}
Probab=100.00 E-value=3.5e-37 Score=277.38 Aligned_cols=170 Identities=19% Similarity=0.282 Sum_probs=153.5
Q ss_pred hhccCCCCeEEEEecccccccCCCccccccccCCChHHHHHHHHHHHHHhccC--cEEEEeccCCCCccchhhhhhhhhc
Q psy8942 29 IKVIVRPKSALLVINVQNDFVSGTLNMSQRSAKQNGLQVIEPINKLLDTVNFN--AVFYSLDWHPSNHISFIDNIKLRKI 106 (340)
Q Consensus 29 ~~~i~~~ktALLVIDmQndF~~G~l~~~~~~~~~~~~~iv~~I~~Li~~aR~~--~Vi~t~d~h~~~h~~f~~~~~~r~~ 106 (340)
..++++.++|||||||||+|++|.+.. ++.+++++++++|++.||.. +|+|++++|++.
T Consensus 16 ~~~~~~~~tALlvID~Q~~f~~g~l~~------~~~~~~i~~i~~l~~~ar~~g~pVi~t~~~~~~~------------- 76 (197)
T 4h17_A 16 YPPAKLSHASLIIIDAQKEYLSGPLKL------SGMDEAVANIARLLDAARKSGRPIIHVRHLGTVG------------- 76 (197)
T ss_dssp CCCCCGGGEEEEEECCBGGGGSSTTCC------TTHHHHHHHHHHHHHHHHHTTCCEEEEEECCCTT-------------
T ss_pred CCCCCCCCeEEEEEcccchhhCCccCC------cCHHHHHHHHHHHHHHHHHCCCeEEEEEEecCCC-------------
Confidence 356889999999999999999976643 67899999999999999874 899999765321
Q ss_pred cCCCCCCCCCccccccccccCCCccccccCCccccCCCCcccccccccccCCceEEEcCCCCCCCcccccccccccCCch
Q psy8942 107 HYTSTVQPEDAQTYDTVVFDGDTPMKQKLWPRHCVQDSWGAELHKDLKIVDNAIKVYMGTDPEEDSYSVFWDSKKLKRTS 186 (340)
Q Consensus 107 ~p~s~l~~~~~~~~~~v~~~g~~~~~~~~wp~hc~~Gt~g~el~~eL~p~~~d~vi~K~~~p~~~r~SaF~~~~~~~~t~ 186 (340)
.+||..|++| +++++|+|.++|.+|.| .+||+|+ +|+
T Consensus 77 ------------------------------~~~~~~g~~g-~~~~~l~~~~~~~vi~K------~~~saF~------~t~ 113 (197)
T 4h17_A 77 ------------------------------GRFDPQGPAG-QFIPGLEPLEGEIVIEK------RMPNAFK------NTK 113 (197)
T ss_dssp ------------------------------STTCTTSGGG-SBCTTCCCCTTCEEEEE------SSSSTTT------TTC
T ss_pred ------------------------------CccccCCCCc-cCCHhhCCCCCCEEEeC------CcCCCcc------cch
Confidence 0246788999 99999999999999999 4899998 999
Q ss_pred HHHHHHhCCCcEEEEEeecCChhHHHHHHHHHhCCCeEEEECCCCCCCC----------HHHHHHHHHHHHhcCcEEecH
Q psy8942 187 LAKQLEAKKVTDVYVCGLAYDVCVGASAIDAITIGYRTILIEDCCRGMD----------LDDIERTRNTILENYGSCVQS 256 (340)
Q Consensus 187 L~~~L~~~gi~~lii~Gv~T~~CV~~Ta~dA~~~Gy~V~vv~Da~~s~~----------~~~~~~al~~l~~~g~~v~ts 256 (340)
|+++|+++|+++|+|+|+.||+||.+||++|+++||+|+|++|||++++ ++.|+.+|..|.+.++.|+++
T Consensus 114 L~~~L~~~gi~~lvi~G~~T~~CV~~Ta~da~~~Gy~V~vv~Da~as~~~~~~~~~~~a~~~h~~aL~~l~~~~a~V~tt 193 (197)
T 4h17_A 114 LHETLQELGHLDLIVCGFMSHSSVSTTVRRAKDYGYRCTLVEDASATRDLAFKDGVIPAAQIHQCEMAVMADNFACVAPT 193 (197)
T ss_dssp HHHHHHHHTCSEEEEEEECTTTHHHHHHHHHHHTTCEEEEEEEEEECCCEEETTEEECHHHHHHHHHHHHHHHTCEEECG
T ss_pred HHHHHHhcCCCEEEEEeeCcCHHHHHHHHHHHHCCCEEEEeCccccccCcccccCCCCHHHHHHHHHHHHHhcceEEeEH
Confidence 9999999999999999999999999999999999999999999999999 889999999999999999999
Q ss_pred HHHH
Q psy8942 257 DEVK 260 (340)
Q Consensus 257 ~ev~ 260 (340)
++++
T Consensus 194 ~e~i 197 (197)
T 4h17_A 194 ASLI 197 (197)
T ss_dssp GGTC
T ss_pred HHcC
Confidence 9864
No 22
>1nba_A N-carbamoylsarcosine amidohydrolase; hydrolase(IN linear amides); 2.00A {Arthrobacter SP} SCOP: c.33.1.3
Probab=100.00 E-value=7.6e-37 Score=286.94 Aligned_cols=190 Identities=17% Similarity=0.246 Sum_probs=162.6
Q ss_pred CCCCeEEEEecccccccC--CCccccccccCCChHHHHHHHHHHHHHhcc--CcEEEEeccCCCCc-cchhhhhhhhhcc
Q psy8942 33 VRPKSALLVINVQNDFVS--GTLNMSQRSAKQNGLQVIEPINKLLDTVNF--NAVFYSLDWHPSNH-ISFIDNIKLRKIH 107 (340)
Q Consensus 33 ~~~ktALLVIDmQndF~~--G~l~~~~~~~~~~~~~iv~~I~~Li~~aR~--~~Vi~t~d~h~~~h-~~f~~~~~~r~~~ 107 (340)
.+.++|||||||||+|++ |.++ .++..++++++++|++++|. .+|||++++|+.++ .++..
T Consensus 41 ~~~~tALLVIDmQndf~~~~g~l~------~~~~~~vi~~i~~Ll~~aR~~g~pVI~t~~~~~~~~~~s~l~-------- 106 (264)
T 1nba_A 41 YGNRPAVIHIDLANAWTQPGHPFS------CPGMETIIPNVQRINEAARAKGVPVFYTTNVYRNRDASSGTN-------- 106 (264)
T ss_dssp CCSSEEEEEESCBHHHHSSSSTTC------CSCHHHHHHHHHHHHHHHHHHTCCEEEEEECBSCCCTTSTTC--------
T ss_pred CCCCeEEEEEcCcHhHhCCCcccC------CCCHHHHHHHHHHHHHHHHHcCCEEEEEEeccCCCccccccc--------
Confidence 467899999999999997 3443 25789999999999999986 48999999886532 11110
Q ss_pred CCCCCCCCCccccccccccCCCccccccCCcc-ccCCCCcccccccccccCCceEEEcCCCCCCCcccccccccccCCch
Q psy8942 108 YTSTVQPEDAQTYDTVVFDGDTPMKQKLWPRH-CVQDSWGAELHKDLKIVDNAIKVYMGTDPEEDSYSVFWDSKKLKRTS 186 (340)
Q Consensus 108 p~s~l~~~~~~~~~~v~~~g~~~~~~~~wp~h-c~~Gt~g~el~~eL~p~~~d~vi~K~~~p~~~r~SaF~~~~~~~~t~ 186 (340)
+.+.| ...||.| |..|++|++++++|.+.++|.+|.|+ +||+|+ +|+
T Consensus 107 --------~~~~~------------~~~~p~~~~~~gt~g~ei~~~L~p~~~d~vi~K~------~~SaF~------~T~ 154 (264)
T 1nba_A 107 --------DMGLW------------YSKIPTETLPADSYWAQIDDRIAPADGEVVIEKN------RASAFP------GTN 154 (264)
T ss_dssp --------SCGGG------------GGTSCGGGCBTTSGGGSBCGGGCCCTTCEEEEES------SSSSST------TSS
T ss_pred --------ccccc------------ccccccccccCCCCccccccccCCCCCCEEEeCC------cCCCcc------cch
Confidence 00111 1246654 67899999999999999999999994 899998 999
Q ss_pred HHHHHHhCCCcEEEEEeecCChhHHHHHHHHHhCCCeEEEECCCCCCCCHHHHHHHHHHHHhcCcEEecHHHHHHHHhcC
Q psy8942 187 LAKQLEAKKVTDVYVCGLAYDVCVGASAIDAITIGYRTILIEDCCRGMDLDDIERTRNTILENYGSCVQSDEVKSMVEGK 266 (340)
Q Consensus 187 L~~~L~~~gi~~lii~Gv~T~~CV~~Ta~dA~~~Gy~V~vv~Da~~s~~~~~~~~al~~l~~~g~~v~ts~ev~~~l~~~ 266 (340)
|+.+|+++|+++|||||+.||+||.+||++|+++||+|+|++|||++.+++.|+.+|+.|...++.|+++++++.+|.+.
T Consensus 155 L~~~Lr~~gi~~lvI~Gv~T~~CV~~Ta~dA~~~Gy~V~Vv~DA~as~~~~~h~~aL~~m~~~~~~vitt~e~l~~L~~~ 234 (264)
T 1nba_A 155 LELFLTSNRIDTLIVTGATAAGCVRHTVEDAIAKGFRPIIPRETIGDRVPGVVQWNLYDIDNKFGDVESTDSVVQYLDAL 234 (264)
T ss_dssp HHHHHHHTTCCEEEEEEECTTTHHHHHHHHHHHHTCEEEEEGGGEECSSSSHHHHHHHHHHHHTCEEECHHHHHHHHHHS
T ss_pred HHHHHHhCCCCEEEEEecCcCCHHHHHHHHHHHCCCEEEEeccccCCCCHHHHHHHHHHHHhcCcEEeEHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred CC
Q psy8942 267 DR 268 (340)
Q Consensus 267 ~~ 268 (340)
+.
T Consensus 235 ~~ 236 (264)
T 1nba_A 235 PQ 236 (264)
T ss_dssp CC
T ss_pred cc
Confidence 54
No 23
>2fq1_A Isochorismatase; ENTB, NRPS, multi-domain, ACP, hydrolase; 2.30A {Escherichia coli}
Probab=100.00 E-value=3e-38 Score=299.16 Aligned_cols=210 Identities=18% Similarity=0.175 Sum_probs=172.0
Q ss_pred ccCCCCeEEEEecccccccCC-CccccccccCCChHHHHHHHHHHHHHhccC--cEEEEeccCCCCccchhhhhhhhhcc
Q psy8942 31 VIVRPKSALLVINVQNDFVSG-TLNMSQRSAKQNGLQVIEPINKLLDTVNFN--AVFYSLDWHPSNHISFIDNIKLRKIH 107 (340)
Q Consensus 31 ~i~~~ktALLVIDmQndF~~G-~l~~~~~~~~~~~~~iv~~I~~Li~~aR~~--~Vi~t~d~h~~~h~~f~~~~~~r~~~ 107 (340)
.++++++|||||||||+|+++ ... .+...++++++++|+++||.. +||||+++|... +.. +.
T Consensus 27 ~l~~~~~ALlvID~Q~~f~~~~~~~------~~~~~~~i~~i~~L~~~ar~~g~pVi~t~~~~~~~---~~~----~~-- 91 (287)
T 2fq1_A 27 AFEPQRAALLIHDMQDYFVSFWGEN------CPMMEQVIANIAALRDYCKQHNIPVYYTAQPKEQS---DED----RA-- 91 (287)
T ss_dssp CCCGGGEEEEEECCBHHHHTTSCTT------CHHHHHHHHHHHHHHHHHHHTTCCEEEEECCSCCC---HHH----HT--
T ss_pred cCCCCCEEEEEECCchHhhCccccc------cchHHHHHHHHHHHHHHHHHcCCeEEEEeecCCCC---hhh----hh--
Confidence 467889999999999999973 221 135789999999999999874 899999876431 110 00
Q ss_pred CCCCCCCCCccccccccccCCCccccccCCccccCCCCcccccccccccCCceEEEcCCCCCCCcccccccccccCCchH
Q psy8942 108 YTSTVQPEDAQTYDTVVFDGDTPMKQKLWPRHCVQDSWGAELHKDLKIVDNAIKVYMGTDPEEDSYSVFWDSKKLKRTSL 187 (340)
Q Consensus 108 p~s~l~~~~~~~~~~v~~~g~~~~~~~~wp~hc~~Gt~g~el~~eL~p~~~d~vi~K~~~p~~~r~SaF~~~~~~~~t~L 187 (340)
.....|++||..|++|++|+++|.|.++|.+|.| ++||+|+ +|+|
T Consensus 92 -----------------------~~~~~~~~~~~~g~~g~ei~~~l~p~~~d~vi~K------~~~saF~------~t~L 136 (287)
T 2fq1_A 92 -----------------------LLNDMWGPGLTRSPEQQKVVDRLTPDADDTVLVK------WRYSAFH------RSPL 136 (287)
T ss_dssp -----------------------THHHHHTTGGGGCGGGCSBCGGGCCCTTSEEEEC------CSSSTTT------TSSH
T ss_pred -----------------------hhhhhccCCCCCCCchhhcccccCCCCCCEEEeC------CccCCcC------CCcH
Confidence 0123688999999999999999999999999999 5899998 9999
Q ss_pred HHHHHhCCCcEEEEEeecCChhHHHHHHHHHhCCCeEEEECCCCCCCCHHHHHHHHHHHHhcCcEEecHHHHHHH---Hh
Q psy8942 188 AKQLEAKKVTDVYVCGLAYDVCVGASAIDAITIGYRTILIEDCCRGMDLDDIERTRNTILENYGSCVQSDEVKSM---VE 264 (340)
Q Consensus 188 ~~~L~~~gi~~lii~Gv~T~~CV~~Ta~dA~~~Gy~V~vv~Da~~s~~~~~~~~al~~l~~~g~~v~ts~ev~~~---l~ 264 (340)
+.+|+++|+++|+|||+.||+||.+||++|+++||+|+|++|||++++++.|+.++++|.+.|+.|+++++++.+ |+
T Consensus 137 ~~~L~~~gi~~lvi~Gv~T~~CV~~Ta~dA~~~Gy~V~vv~Da~as~~~~~h~~al~~m~~~~~~v~~t~~v~~~~~~l~ 216 (287)
T 2fq1_A 137 EQMLKESGRNQLIITGVYAHIGCMTTATDAFMRDIKPFMVADALADFSRDEHLMSLKYVAGRSGRVVMTEELLPAPIPAS 216 (287)
T ss_dssp HHHHHHTTCCEEEEEEECTTTHHHHHHHHHHHTTCEEEEEEEEEECSSHHHHHHHHHHHHHHTCEEECHHHHSSSCCCSS
T ss_pred HHHHHHCCCCEEEEEEeCcchHHHHHHHHHHHCCCEEEEechhccCCCHHHHHHHHHHHHHhCcEEeeHHHHHhCcCccC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999987 66
Q ss_pred cCCCCchhhHHHHHHHHHhhcccchhhhhh
Q psy8942 265 GKDRRPELGLKLALELKAKCIGSLYVRVIE 294 (340)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (340)
++|.+ ..++..+-.....+.|.++++
T Consensus 217 ~dwlr----~~va~~L~~~~~i~~~~nL~~ 242 (287)
T 2fq1_A 217 KAALR----EVILPLLDESDEPFDDDNLID 242 (287)
T ss_dssp HHHHH----HHHGGGCCCSSCCCTTSCSGG
T ss_pred HHHHH----HHHHHHhCCHhhcCCCCCHHH
Confidence 55533 233333311113455777776
No 24
>2a67_A Isochorismatase family protein; structural genomics, PSI, protein structure initiative, MIDW center for structural genomics, MCSG; 2.00A {Enterococcus faecalis}
Probab=100.00 E-value=1.2e-34 Score=254.07 Aligned_cols=158 Identities=16% Similarity=0.211 Sum_probs=140.0
Q ss_pred CCCeEEEEecccccccCCCccccccccCCChHHHHHHHHHHHHHhccC--cEEEEeccCCCCccchhhhhhhhhccCCCC
Q psy8942 34 RPKSALLVINVQNDFVSGTLNMSQRSAKQNGLQVIEPINKLLDTVNFN--AVFYSLDWHPSNHISFIDNIKLRKIHYTST 111 (340)
Q Consensus 34 ~~ktALLVIDmQndF~~G~l~~~~~~~~~~~~~iv~~I~~Li~~aR~~--~Vi~t~d~h~~~h~~f~~~~~~r~~~p~s~ 111 (340)
++++|||||||||+|+++.++. ++.+++++++++|++++|.. +|+++++++
T Consensus 2 mm~~aLlvID~Q~~f~~~~~~~------~~~~~~~~~i~~li~~ar~~g~pVi~t~~~~--------------------- 54 (167)
T 2a67_A 2 MKNRALLLIDFQKGIESPTQQL------YRLPAVLDKVNQRIAVYRQHHAPIIFVQHEE--------------------- 54 (167)
T ss_dssp CSSEEEEEECCBTTSCCSSCCC------TTHHHHHHHHHHHHHHHHHTTCCEEEEEECB---------------------
T ss_pred CCCcEEEEEcCcHHhcCCCCcc------cCHHHHHHHHHHHHHHHHHCCCeEEEEEeCC---------------------
Confidence 3589999999999999854332 57899999999999999864 899998521
Q ss_pred CCCCCccccccccccCCCccccccCCccccCCCCcccccccccccCCceEEEcCCCCCCCcccccccccccCCchHHHHH
Q psy8942 112 VQPEDAQTYDTVVFDGDTPMKQKLWPRHCVQDSWGAELHKDLKIVDNAIKVYMGTDPEEDSYSVFWDSKKLKRTSLAKQL 191 (340)
Q Consensus 112 l~~~~~~~~~~v~~~g~~~~~~~~wp~hc~~Gt~g~el~~eL~p~~~d~vi~K~~~p~~~r~SaF~~~~~~~~t~L~~~L 191 (340)
++|.+|++|++++++|.|.++|.+|.|+ +||+|+ +|+|+.+|
T Consensus 55 --------------------------~~~~~g~~g~~i~~~l~~~~~~~vi~K~------~~saF~------~t~L~~~L 96 (167)
T 2a67_A 55 --------------------------TELPFGSDSWQLFEKLDTQPTDFFIRKT------HANAFY------QTNLNDLL 96 (167)
T ss_dssp --------------------------TTBCTTSTTTSBCTTSCCCTTSEEEEES------SSSTTT------TSSHHHHH
T ss_pred --------------------------CCccCCCCcceechhhCCCCCCEEEECC------CCCCCC------CCcHHHHH
Confidence 1356789999999999999999999994 899998 89999999
Q ss_pred HhCCCcEEEEEeecCChhHHHHHHHHHhCCCeEEEECCCCCCCCHH------HHHHHHHHHHhcCcEEecH
Q psy8942 192 EAKKVTDVYVCGLAYDVCVGASAIDAITIGYRTILIEDCCRGMDLD------DIERTRNTILENYGSCVQS 256 (340)
Q Consensus 192 ~~~gi~~lii~Gv~T~~CV~~Ta~dA~~~Gy~V~vv~Da~~s~~~~------~~~~al~~l~~~g~~v~ts 256 (340)
+++|+++|+|+|+.||+||.+||++|+++||+|+|++|||++++.+ .|+.++..|...++.|+++
T Consensus 97 ~~~gi~~lvv~G~~T~~CV~~Ta~da~~~Gy~v~v~~Da~~s~~~~~~~a~~~~~~~l~~l~~~~a~v~~t 167 (167)
T 2a67_A 97 TEQAVQTLEIAGVQTEFCVDTTIRMAHGLGYTCLMTPKTTSTLDNGHLTAAQIIQHHEAIWAGRFLTFLSL 167 (167)
T ss_dssp HHTTCCEEEEEEECTTTHHHHHHHHHHHHTCEEEECTTCEECCCCSSSCHHHHHHHHHHHHBTTTBEECC-
T ss_pred HHCCCCEEEEEecccChHHHHHHHHHHHCCCEEEEechhhcCCCcccCCHHHHHHHHHHHHhccceEEEeC
Confidence 9999999999999999999999999999999999999999999976 8899999888889998874
No 25
>2b34_A F35G2.2, MAR1 ribonuclease; isochorismatase family, structural genomics, PSI, protein structure initiative; 2.14A {Caenorhabditis elegans}
Probab=100.00 E-value=9.2e-35 Score=261.96 Aligned_cols=183 Identities=15% Similarity=0.152 Sum_probs=156.0
Q ss_pred hccCCCCeEEEEecccccccCCCccccccccCCChHHHHHHHHHHHHHhccC--cEEEEeccCCCCccchhhhhhhhhcc
Q psy8942 30 KVIVRPKSALLVINVQNDFVSGTLNMSQRSAKQNGLQVIEPINKLLDTVNFN--AVFYSLDWHPSNHISFIDNIKLRKIH 107 (340)
Q Consensus 30 ~~i~~~ktALLVIDmQndF~~G~l~~~~~~~~~~~~~iv~~I~~Li~~aR~~--~Vi~t~d~h~~~h~~f~~~~~~r~~~ 107 (340)
..+++.++|||||||||+|+++ .++.+++++++++|++.+|.. +|++++++++
T Consensus 8 ~~l~~~~~ALlvID~Q~~f~~~---------~~~~~~~i~~i~~l~~~ar~~g~pVi~t~~~~~---------------- 62 (199)
T 2b34_A 8 ARINPTNSALFVCDLQEKFASN---------IKYFPEIITTSRRLIDAARILSIPTIVTEQYPK---------------- 62 (199)
T ss_dssp CCCCTTTEEEEEECCBGGGTTS---------STTHHHHHHHHHHHHHHHHHTTCCEEEEEESHH----------------
T ss_pred hcCCCCCEEEEEEeCHhHHhhh---------cCCHHHHHHHHHHHHHHHHHCCCcEEEEEecCC----------------
Confidence 4578899999999999999974 146899999999999999874 8999985310
Q ss_pred CCCCCCCCCccccccccccCCCccccccCCccccCCCCcccccccccccCC-ceEEEcCCCCCCCcccccccccccCCch
Q psy8942 108 YTSTVQPEDAQTYDTVVFDGDTPMKQKLWPRHCVQDSWGAELHKDLKIVDN-AIKVYMGTDPEEDSYSVFWDSKKLKRTS 186 (340)
Q Consensus 108 p~s~l~~~~~~~~~~v~~~g~~~~~~~~wp~hc~~Gt~g~el~~eL~p~~~-d~vi~K~~~p~~~r~SaF~~~~~~~~t~ 186 (340)
-.|+++++|+++| ++ |.+|.| .+||+|+ +|
T Consensus 63 ---------------------------------~~g~~~~el~~~l---~~~~~vi~K------~~~saF~------~t- 93 (199)
T 2b34_A 63 ---------------------------------GLGHTVPTLKEGL---AENTPIFDK------TKFSMCI------PP- 93 (199)
T ss_dssp ---------------------------------HHCCBCHHHHHHS---CTTCCEEEE------SBSSSCC------GG-
T ss_pred ---------------------------------CCCCChHHHHhhC---CCCCeeeec------CccCCcc------cH-
Confidence 0145678888887 34 889999 4899998 78
Q ss_pred HHHHHHhCCCcEEEEEeecCChhHHHHHHHHHhCCCeEEEECCCCCCCCHHHHHHHHHHHHhcCcEEecHHHHHHHHhcC
Q psy8942 187 LAKQLEAKKVTDVYVCGLAYDVCVGASAIDAITIGYRTILIEDCCRGMDLDDIERTRNTILENYGSCVQSDEVKSMVEGK 266 (340)
Q Consensus 187 L~~~L~~~gi~~lii~Gv~T~~CV~~Ta~dA~~~Gy~V~vv~Da~~s~~~~~~~~al~~l~~~g~~v~ts~ev~~~l~~~ 266 (340)
|+.+|++ +++|+|||+.||+||.+||++|+++||+|+|++|||++++++.|+.++++|...|+.|+++++++.+|.++
T Consensus 94 L~~~L~~--i~~lvi~G~~T~~CV~~Ta~da~~~Gy~V~vv~Da~as~~~~~h~~al~~m~~~g~~v~~t~~~l~~l~~~ 171 (199)
T 2b34_A 94 TEDTLKK--VQNVILVGIEAHVCVLQTTYDLLERGLNVHVVVDAVSSRSHTDRHFAFKQMEQAGAILTTSEATILGLVGG 171 (199)
T ss_dssp GHHHHTT--CSEEEEEEECTTTHHHHHHHHHHHTTCEEEEEEEEEECSSHHHHHHHHHHHHHHTCEEECHHHHHHHHHCB
T ss_pred HHHHHcC--CCEEEEEEEecCHHHHHHHHHHHHCCCEEEEeCcccCCCCHHHHHHHHHHHHHCCCEEecHHHHHHHHHHh
Confidence 9999999 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCchhhHHHHHHHHHhhcccchhh
Q psy8942 267 DRRPELGLKLALELKAKCIGSLYVR 291 (340)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (340)
+.+|+|. ++....++ ..+.|..
T Consensus 172 ~~~~~fk-~~~~l~k~--~~~~~~~ 193 (199)
T 2b34_A 172 SDHPKFK-EVQKLILT--SAPDTGL 193 (199)
T ss_dssp TTSTTHH-HHHHHTSS--CCCCCSC
T ss_pred cCCccHH-HHHHHHHh--cCcccCc
Confidence 9999976 44444443 4444443
No 26
>1yzv_A Hypothetical protein; structural genomics, PSI, protein structure initiative, STRU genomics of pathogenic protozoa consortium, SGPP; 2.00A {Trypanosoma cruzi}
Probab=100.00 E-value=2.1e-34 Score=260.78 Aligned_cols=178 Identities=13% Similarity=0.176 Sum_probs=154.8
Q ss_pred hhccCCCCeEEEEecccccccCCCccccccccCCChHHHHHHHHHHHHHhcc--Cc---EEEEeccCCCCccchhhhhhh
Q psy8942 29 IKVIVRPKSALLVINVQNDFVSGTLNMSQRSAKQNGLQVIEPINKLLDTVNF--NA---VFYSLDWHPSNHISFIDNIKL 103 (340)
Q Consensus 29 ~~~i~~~ktALLVIDmQndF~~G~l~~~~~~~~~~~~~iv~~I~~Li~~aR~--~~---Vi~t~d~h~~~h~~f~~~~~~ 103 (340)
...+++.++|||||||||+|+++ .++.+++++++++|++.+|. .| |++|+++++.
T Consensus 13 ~~~~~~~~tALlvID~Q~~f~~~---------~~~~~~vi~~i~~Ll~~ar~~g~p~~~Vi~t~~~~~~----------- 72 (204)
T 1yzv_A 13 LKHYGSCKTAFFCCDIQEKFMGR---------IANSANCVFVANRFAGLHTALGTAHSVYIVTEQYPKG----------- 72 (204)
T ss_dssp CCCTTTSEEEEEEECCBHHHHTT---------STTHHHHHHHHHHHHHHHHHHCTTTEEEEEEEESHHH-----------
T ss_pred cccCCCCCeEEEEEcCHhHhhhc---------cCCHHHHHHHHHHHHHHHHHcCCCcceEEEEEecCCc-----------
Confidence 34678889999999999999973 15689999999999999986 38 9998643210
Q ss_pred hhccCCCCCCCCCccccccccccCCCccccccCCccccCCCCcccccccccccCCceEEEcCCCCCCCcccccccccccC
Q psy8942 104 RKIHYTSTVQPEDAQTYDTVVFDGDTPMKQKLWPRHCVQDSWGAELHKDLKIVDNAIKVYMGTDPEEDSYSVFWDSKKLK 183 (340)
Q Consensus 104 r~~~p~s~l~~~~~~~~~~v~~~g~~~~~~~~wp~hc~~Gt~g~el~~eL~p~~~d~vi~K~~~p~~~r~SaF~~~~~~~ 183 (340)
.| .++++|.|.++|.+|.|+ +||+|+
T Consensus 73 --------------------------------------~G----~~~~eL~~~~~d~vi~K~------~~SaF~------ 98 (204)
T 1yzv_A 73 --------------------------------------LG----ATSADIRLPPDAHVFSKK------RFAMLV------ 98 (204)
T ss_dssp --------------------------------------HC----SBCTTSCCCTTCEEEEES------SSSSCC------
T ss_pred --------------------------------------CC----CChHHhcCCCCCEEEECC------cCCCch------
Confidence 02 267788888889999994 899998
Q ss_pred CchHHHHHHhCCCcEEEEEeecCChhHHHHHHHHHhCCCeEEEECCCCCCCCHHHHHHHHHHHH---hcCcEEecHHHHH
Q psy8942 184 RTSLAKQLEAKKVTDVYVCGLAYDVCVGASAIDAITIGYRTILIEDCCRGMDLDDIERTRNTIL---ENYGSCVQSDEVK 260 (340)
Q Consensus 184 ~t~L~~~L~~~gi~~lii~Gv~T~~CV~~Ta~dA~~~Gy~V~vv~Da~~s~~~~~~~~al~~l~---~~g~~v~ts~ev~ 260 (340)
+ +|+.+|+++|+++|+|||++|++||.+||++|+++||+|+|++|||++++++.|+.+++.|. ..|+.++++++++
T Consensus 99 ~-~L~~~L~~~gi~~lvi~Gv~T~~CV~~Ta~dA~~~Gy~V~vv~Da~as~~~~~h~~aL~~m~~~~~~g~~v~t~e~vl 177 (204)
T 1yzv_A 99 P-QVMPLVDLPEVEQVVLWGFETHVCILQTAAALLDMKKKVVIAVDGCGSQSQGDHCTAIQLMQSWSGDGCYISTSESIL 177 (204)
T ss_dssp T-TTHHHHSSTTEEEEEEEEECTTTHHHHHHHHHHHTTCEEEEEEEEEECSSHHHHHHHHHHHHTTGGGTEEEECHHHHH
T ss_pred h-HHHHHHHhCCCCEEEEEEeccCHHHHHHHHHHHHCCCEEEEECCccCCCCHHHHHHHHHHHHHHhcCCeEEeCHHHHH
Confidence 7 99999999999999999999999999999999999999999999999999999999999999 8899999999999
Q ss_pred HHHhcCCCCchhhHHHHHHHHH
Q psy8942 261 SMVEGKDRRPELGLKLALELKA 282 (340)
Q Consensus 261 ~~l~~~~~~~~~~~~~~~~~~~ 282 (340)
.+|.+++..|+|. .+....++
T Consensus 178 ~~ll~~~~~~~fk-~~~~l~k~ 198 (204)
T 1yzv_A 178 MQLLKDASDPVFK-TIAPLMKQ 198 (204)
T ss_dssp HHHHCSTTSTTHH-HHHHHHHS
T ss_pred HHHHHhcCCccHH-HHHHHHHh
Confidence 9999999999986 44455554
No 27
>1x9g_A Putative MAR1; structural genomics, protein structure initiative, SGPP, PSI structural genomics of pathogenic protozoa consortium; 2.41A {Leishmania donovani} SCOP: c.33.1.3 PDB: 1xn4_A
Probab=100.00 E-value=2.4e-33 Score=253.09 Aligned_cols=166 Identities=14% Similarity=0.199 Sum_probs=145.8
Q ss_pred hccCCCCeEEEEecccccccCCCccccccccCCChHHHHHHHHHHHHHhcc----CcEEEEeccCCCCccchhhhhhhhh
Q psy8942 30 KVIVRPKSALLVINVQNDFVSGTLNMSQRSAKQNGLQVIEPINKLLDTVNF----NAVFYSLDWHPSNHISFIDNIKLRK 105 (340)
Q Consensus 30 ~~i~~~ktALLVIDmQndF~~G~l~~~~~~~~~~~~~iv~~I~~Li~~aR~----~~Vi~t~d~h~~~h~~f~~~~~~r~ 105 (340)
..++++++|||||||||+|+++ .++.+++++++++|++.+|. .+|++++++++.
T Consensus 14 ~~~~~~~tALlvID~Q~~f~~~---------~~~~~~vi~~i~~ll~~ar~~g~~~pVi~t~~~~~~------------- 71 (200)
T 1x9g_A 14 PHYSKGKTAFLCVDLQEAFSKR---------IENFANCVFVANRLARLHEVVPENTKYIVTEHYPKG------------- 71 (200)
T ss_dssp CCTTSSCEEEEEECCBTTTTTT---------STTHHHHHHHHHHHHHHHHHSTTSEEEEEEEESCSS-------------
T ss_pred hccCCCCEEEEEECChHHHhhc---------cCCHHHHHHHHHHHHHHHHHhCCCceEEEEeecCCc-------------
Confidence 3567889999999999999972 25789999999999999985 368888753210
Q ss_pred ccCCCCCCCCCccccccccccCCCccccccCCccccCCCCcccccccccccCC-ceEEEcCCCCCCCcccccccccccCC
Q psy8942 106 IHYTSTVQPEDAQTYDTVVFDGDTPMKQKLWPRHCVQDSWGAELHKDLKIVDN-AIKVYMGTDPEEDSYSVFWDSKKLKR 184 (340)
Q Consensus 106 ~~p~s~l~~~~~~~~~~v~~~g~~~~~~~~wp~hc~~Gt~g~el~~eL~p~~~-d~vi~K~~~p~~~r~SaF~~~~~~~~ 184 (340)
+| +++|+|. .++ |.+|.| .+||+|+ +
T Consensus 72 ---------------------------------------~G-~~~~eL~-~~~~~~vi~K------~~~SaF~------~ 98 (200)
T 1x9g_A 72 ---------------------------------------LG-RIVPEIT-LPKTAHLIEK------TRFSCVV------P 98 (200)
T ss_dssp ---------------------------------------SC-CBCTTSC-CCTTCEEEEE------SSSSSCC------H
T ss_pred ---------------------------------------cC-ccCHHHh-CCCCCeEEeC------CCCCCch------h
Confidence 11 3566666 566 899999 4899998 7
Q ss_pred chHHHHHHhCCCcEEEEEeecCChhHHHHHHHHHhCCCeEEEECCCCCCCCHHHHHHHHHHHH--hcCcEEecHHHHHHH
Q psy8942 185 TSLAKQLEAKKVTDVYVCGLAYDVCVGASAIDAITIGYRTILIEDCCRGMDLDDIERTRNTIL--ENYGSCVQSDEVKSM 262 (340)
Q Consensus 185 t~L~~~L~~~gi~~lii~Gv~T~~CV~~Ta~dA~~~Gy~V~vv~Da~~s~~~~~~~~al~~l~--~~g~~v~ts~ev~~~ 262 (340)
+|+.+|+ |+++|+|+|++||+||.+||++|+++||+|+|++|||++++++.|+.+++.|. ..|+.|+++++++.+
T Consensus 99 -~L~~~L~--gi~~lvi~Gv~T~~CV~~Ta~dA~~~Gy~V~Vv~Da~as~~~~~h~~aL~~m~~~~~g~~v~tte~vl~~ 175 (200)
T 1x9g_A 99 -QVEELLE--DVDNAVVFGIEGHACILQTVADLLDMNKRVFLPKDGLGSQKKTDFKAAIKLMSSWGPNCEITTSESILLQ 175 (200)
T ss_dssp -HHHHTTT--TCCEEEEEEECTTTHHHHHHHHHHHTTCEEEEEGGGEECSSHHHHHHHHHHHHTSCSSEEEECHHHHHHH
T ss_pred -hHHHHhC--CCCEEEEEEEecCcHHHHHHHHHHhCCCEEEEeCCCcCCCCHHHHHHHHHHHHhhCCCeEEecHHHHHHH
Confidence 9999999 99999999999999999999999999999999999999999999999999999 899999999999999
Q ss_pred HhcCCCCchhh
Q psy8942 263 VEGKDRRPELG 273 (340)
Q Consensus 263 l~~~~~~~~~~ 273 (340)
|.+++..|+|.
T Consensus 176 l~~~~~~~~fk 186 (200)
T 1x9g_A 176 MTKDAMDPNFK 186 (200)
T ss_dssp HSCCTTCTTHH
T ss_pred HHHhcCCccHH
Confidence 99999999877
No 28
>3h7i_A Ribonuclease H, RNAse H; BPT4 RNAse H, 5'-3' exonuclease, hydrolase, endonuclease; 1.50A {Enterobacteria phage T4} PDB: 2ihn_A 3h8w_A 3h8j_A 1tfr_A 3h8s_A
Probab=50.66 E-value=9.2 Score=35.85 Aligned_cols=44 Identities=5% Similarity=-0.058 Sum_probs=40.8
Q ss_pred chHHHHHHhCCCcEEEEEeecCChhHHHHHHHHHhCCCeEEEEC
Q psy8942 185 TSLAKQLEAKKVTDVYVCGLAYDVCVGASAIDAITIGYRTILIE 228 (340)
Q Consensus 185 t~L~~~L~~~gi~~lii~Gv~T~~CV~~Ta~dA~~~Gy~V~vv~ 228 (340)
+-+.+.|++.|+..+.+-|...|-++.+-|..+...|++|++++
T Consensus 110 p~ike~l~a~gi~~l~~~G~EADDiIgTLA~~a~~~g~~V~IvS 153 (305)
T 3h7i_A 110 KVIDELKAYMPYIVMDIDKYEANDHIAVLVKKFSLEGHKILIIS 153 (305)
T ss_dssp HHHHHHHHHSSSEEECCTTCCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHHHCCCCEEccCCccHHHHHHHHHHHHHHCCCcEEEEe
Confidence 45778899999999999999999999999999999999999986
No 29
>1j0a_A 1-aminocyclopropane-1-carboxylate deaminase; PLP dependent, lyase; HET: PLP; 2.50A {Pyrococcus horikoshii} SCOP: c.79.1.1 PDB: 1j0b_A*
Probab=48.47 E-value=55 Score=30.02 Aligned_cols=59 Identities=12% Similarity=-0.115 Sum_probs=42.6
Q ss_pred HHhCCCcEEEEEeecCChhHHHHHHHHHhCCCeEEEECCCCCCCCHHHHHHHHHHHHhcCcEEe
Q psy8942 191 LEAKKVTDVYVCGLAYDVCVGASAIDAITIGYRTILIEDCCRGMDLDDIERTRNTILENYGSCV 254 (340)
Q Consensus 191 L~~~gi~~lii~Gv~T~~CV~~Ta~dA~~~Gy~V~vv~Da~~s~~~~~~~~al~~l~~~g~~v~ 254 (340)
.+++|.++|+-+|-.+..--.+.|..|..+|++++++..... .+.+. ++.++..|+.|+
T Consensus 65 a~~~G~~~vv~~G~ssGN~g~alA~~a~~~G~~~~iv~p~~~-~~~~k----~~~~~~~GA~v~ 123 (325)
T 1j0a_A 65 ALSKGADVVITVGAVHSNHAFVTGLAAKKLGLDAILVLRGKE-ELKGN----YLLDKIMGIETR 123 (325)
T ss_dssp HHHTTCSEEEEECCTTCHHHHHHHHHHHHTTCEEEEEEESCC-CSCHH----HHHHHHTTCEEE
T ss_pred HHHcCCCEEEEcCCcchHHHHHHHHHHHHhCCcEEEEECCCC-CCCch----HHHHHHCCCEEE
Confidence 345788999988766666667788889999999988876644 12222 556777888865
No 30
>1f2d_A 1-aminocyclopropane-1-carboxylate deaminase; carbon-carbon L open twisted alpha/beta, lyase; HET: PLP; 2.00A {Williopsis saturnus} SCOP: c.79.1.1 PDB: 1j0e_A* 1j0d_A* 1j0c_A*
Probab=47.69 E-value=30 Score=32.11 Aligned_cols=66 Identities=12% Similarity=-0.031 Sum_probs=46.0
Q ss_pred HHHhCCCcEEEEEeecCChhHHHHHHHHHhCCCeEEEECCCCCC-CC--HH--HHHHHHHHHHhcCcEEec
Q psy8942 190 QLEAKKVTDVYVCGLAYDVCVGASAIDAITIGYRTILIEDCCRG-MD--LD--DIERTRNTILENYGSCVQ 255 (340)
Q Consensus 190 ~L~~~gi~~lii~Gv~T~~CV~~Ta~dA~~~Gy~V~vv~Da~~s-~~--~~--~~~~al~~l~~~g~~v~t 255 (340)
.+.+.|.++|+-+|-.+..=-.+.|..|..+|++++++.....+ .. .+ ....-++.++..|+.|+-
T Consensus 61 ~a~~~g~~~vv~~G~ssGN~g~alA~~a~~~G~~~~iv~p~~~~~~~~~~~~~~~~~k~~~~~~~GA~v~~ 131 (341)
T 1f2d_A 61 DIVEGDYTHLVSIGGRQSNQTRMVAALAAKLGKKCVLIQEDWVPIPEAEKDVYNRVGNIELSRIMGADVRV 131 (341)
T ss_dssp HHHHSCCSEEEEEEETTCHHHHHHHHHHHHHTCEEEEEEECCSCCCGGGTTTTTTSHHHHHHHHTTCEEEE
T ss_pred HHHHcCCCEEEEcCCcchHHHHHHHHHHHHhCCceEEEeccCCCccccccccccccccHHHHHhCCCEEEE
Confidence 34467889999888777777778889999999999988776554 11 11 112235677778888653
No 31
>2f06_A Conserved hypothetical protein; structural genomics hypothetical protein, PSI, protein struc initiative; HET: MSE HIS; 2.10A {Bacteroides thetaiotaomicron} SCOP: d.58.18.11 d.58.18.11
Probab=46.03 E-value=39 Score=27.01 Aligned_cols=76 Identities=9% Similarity=0.074 Sum_probs=54.0
Q ss_pred chHHHHHHhCCCc----EEEEEeecCChhHHHHHHHHH-hCCCeE-EEEC---CCCCC--CCHHHHHHHHHHHHhcCcEE
Q psy8942 185 TSLAKQLEAKKVT----DVYVCGLAYDVCVGASAIDAI-TIGYRT-ILIE---DCCRG--MDLDDIERTRNTILENYGSC 253 (340)
Q Consensus 185 t~L~~~L~~~gi~----~lii~Gv~T~~CV~~Ta~dA~-~~Gy~V-~vv~---Da~~s--~~~~~~~~al~~l~~~g~~v 253 (340)
..+.+.|++.|.. .++.+|+...-.+.+.+..++ ++|.++ .+.. +.... +..+..+.|.+.|...|-.|
T Consensus 56 ~~a~~~L~~~G~~v~~~svv~v~~~d~pGvla~i~~~L~~~~InI~~~~~~~~~~~~~~~i~~~d~~~A~~~L~~~g~~v 135 (144)
T 2f06_A 56 DKAYKALKDNHFAVNITDVVGISCPNVPGALAKVLGFLSAEGVFIEYMYSFANNNVANVVIRPSNMDKCIEVLKEKKVDL 135 (144)
T ss_dssp HHHHHHHHHTTCCEEEEEEEEEEEESSTTHHHHHHHHHHHTTCCEEEEEEEEETTEEEEEEEESCHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHcCCeEeeeeEEEEEeCCCCcHHHHHHHHHHHCCCCEEEEEEEccCCcEEEEEEeCCHHHHHHHHHHcCCEE
Confidence 4456777777754 467778999999999988866 678888 4343 22111 23456788899999999999
Q ss_pred ecHHHHH
Q psy8942 254 VQSDEVK 260 (340)
Q Consensus 254 ~ts~ev~ 260 (340)
.+.+++.
T Consensus 136 ~~~~~~~ 142 (144)
T 2f06_A 136 LAASDLY 142 (144)
T ss_dssp ECHHHHT
T ss_pred ecHHHHh
Confidence 9888763
No 32
>3uqz_A DNA processing protein DPRA; SAM and rossmann fold, DNA processing protein A, DNA binding; HET: DNA SO4; 2.70A {Streptococcus pneumoniae}
Probab=45.84 E-value=52 Score=30.44 Aligned_cols=64 Identities=13% Similarity=0.040 Sum_probs=46.8
Q ss_pred cEEEEEeecCChhHHHHHHHHHhCCCeEEEECCCCCCCCHHHHHHHHHHHHhcCcE-EecHHHHHHHHh
Q psy8942 197 TDVYVCGLAYDVCVGASAIDAITIGYRTILIEDCCRGMDLDDIERTRNTILENYGS-CVQSDEVKSMVE 264 (340)
Q Consensus 197 ~~lii~Gv~T~~CV~~Ta~dA~~~Gy~V~vv~Da~~s~~~~~~~~al~~l~~~g~~-v~ts~ev~~~l~ 264 (340)
+-++|+=......-+.||..|.+.|-+|++|--.+.+...+. -..|.+.|+. |++.++++++|+
T Consensus 217 ~~~vVvEA~~~SGsliTA~~Ale~gR~VfavPG~i~~~~s~G----~n~LI~~GA~lv~~~~Dil~el~ 281 (288)
T 3uqz_A 217 RGVIVAEAKMRSGSLITCERAMEEGRDVFAIPGSILDGLSDG----CHHLIQEGAKLVTSGQDVLAEFE 281 (288)
T ss_dssp SEEEEESCCTTCHHHHHHHHHHHTTCEEEECCCCSSSSTTHH----HHHHHHTTCEECSSHHHHHHHCC
T ss_pred CeEEEEecCCCChHHHHHHHHHHcCCeEEEECCCCCCccchH----HHHHHHCCCEEECCHHHHHHHhC
Confidence 567777777778889999999999999998865444333222 3334456887 567889999885
No 33
>3ibt_A 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, oxidoreductase; 2.60A {Pseudomonas putida}
Probab=39.28 E-value=74 Score=26.40 Aligned_cols=49 Identities=14% Similarity=0.163 Sum_probs=36.3
Q ss_pred CchHHHHHHhCCCcEEEEEeecCChhHHHHHHHHH-hCCCeEEEECCCCC
Q psy8942 184 RTSLAKQLEAKKVTDVYVCGLAYDVCVGASAIDAI-TIGYRTILIEDCCR 232 (340)
Q Consensus 184 ~t~L~~~L~~~gi~~lii~Gv~T~~CV~~Ta~dA~-~~Gy~V~vv~Da~~ 232 (340)
..++.++++..+.+.++++|-..-..+...+.... -...+-.++.+...
T Consensus 74 ~~~~~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~ 123 (264)
T 3ibt_A 74 AQDLLAFIDAKGIRDFQMVSTSHGCWVNIDVCEQLGAARLPKTIIIDWLL 123 (264)
T ss_dssp HHHHHHHHHHTTCCSEEEEEETTHHHHHHHHHHHSCTTTSCEEEEESCCS
T ss_pred HHHHHHHHHhcCCCceEEEecchhHHHHHHHHHhhChhhhheEEEecCCC
Confidence 46888999999999999999998877766555444 34566666666555
No 34
>1byr_A Protein (endonuclease); phosphodiesterase,; 2.00A {Salmonella typhimurium} SCOP: d.136.1.1 PDB: 1bys_A
Probab=37.88 E-value=1.4e+02 Score=23.37 Aligned_cols=67 Identities=10% Similarity=-0.024 Sum_probs=42.8
Q ss_pred hHHHHHHhCCCcEEEEEee-cCChhHHHHHHHHHhCCCeEEEECCCCCCCCHHHHHHHHHHHHhcCcEEe
Q psy8942 186 SLAKQLEAKKVTDVYVCGL-AYDVCVGASAIDAITIGYRTILIEDCCRGMDLDDIERTRNTILENYGSCV 254 (340)
Q Consensus 186 ~L~~~L~~~gi~~lii~Gv-~T~~CV~~Ta~dA~~~Gy~V~vv~Da~~s~~~~~~~~al~~l~~~g~~v~ 254 (340)
.+.+.+++.. ++|.|+.. .++--+......|.++|-+|.++.|....... .....++.|...|+.|.
T Consensus 18 ~~~~~i~~A~-~~I~i~~~~~~~~~i~~aL~~a~~rGV~Vril~~~~~~~~~-~~~~~~~~L~~~gv~v~ 85 (155)
T 1byr_A 18 LVLSAIDSAK-TSIRMMAYSFTAPDIMKALVAAKKRGVDVKIVIDERGNTGR-ASIAAMNYIANSGIPLR 85 (155)
T ss_dssp HHHHHHHHCS-SEEEEEESSBCCHHHHHHHHHHHHTTCEEEEEEESTTCCSH-HHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHh-hEEEEEEEEeCCHHHHHHHHHHHHCCCEEEEEEeCcccccc-ccHHHHHHHHHCCCeEE
Confidence 3444444433 45555543 34556777777889999999999998776432 23445667777777654
No 35
>3szu_A ISPH, 4-hydroxy-3-methylbut-2-ENYL diphosphate reductas; 3Fe-4S iron-sulfur cluster, conserved cysteine, IPP and DMAP production final STEP; HET: H6P; 1.40A {Escherichia coli} PDB: 3szl_A* 3f7t_A* 3szo_A* 3t0f_A* 3t0g_A* 3urk_A* 3utc_A* 3utd_A* 3uv3_A* 3uv6_A* 3uv7_A* 3uwm_A* 3ke8_A* 3ke9_A* 3kef_A* 3kel_A 3kem_A*
Probab=36.40 E-value=2.7e+02 Score=26.06 Aligned_cols=91 Identities=16% Similarity=0.157 Sum_probs=54.2
Q ss_pred cccccccccccC-CceEEEcCCCCCCCcccccccccccCCchHHHHHHhCCCcEEEEEeecCChhH-----HHHHHHHHh
Q psy8942 146 GAELHKDLKIVD-NAIKVYMGTDPEEDSYSVFWDSKKLKRTSLAKQLEAKKVTDVYVCGLAYDVCV-----GASAIDAIT 219 (340)
Q Consensus 146 g~el~~eL~p~~-~d~vi~K~~~p~~~r~SaF~~~~~~~~t~L~~~L~~~gi~~lii~Gv~T~~CV-----~~Ta~dA~~ 219 (340)
|..++++|...+ ++.||-. |+ + -.++..+.++++|.+- | ---|- ...+....+
T Consensus 65 Gv~~ve~l~ev~~g~~VIir----------AH-G----v~~~v~~~a~~rgl~i--i----DATCP~V~Kvh~~v~~~~~ 123 (328)
T 3szu_A 65 GAIFIEQISEVPDGAILIFS----------AH-G----VSQAVRNEAKSRDLTV--F----DATCPLVTKVHMEVARASR 123 (328)
T ss_dssp TEEEESSGGGSCTTCEEEEC----------TT-C----CCHHHHHHHHHTTCEE--E----ECCCHHHHHHHHHHHHHHH
T ss_pred CCEEecchhhCCCCCEEEEE----------CC-C----CCHHHHHHHHHCCCEE--E----ECCCcchHHHHHHHHHHHh
Confidence 566667776554 4555554 22 1 1678889999999862 1 22343 344666778
Q ss_pred CCCeEEEECCCCCCCCHHHHHHHHHHHHhc-----CcEEecHHHHHHHHh
Q psy8942 220 IGYRTILIEDCCRGMDLDDIERTRNTILEN-----YGSCVQSDEVKSMVE 264 (340)
Q Consensus 220 ~Gy~V~vv~Da~~s~~~~~~~~al~~l~~~-----g~~v~ts~ev~~~l~ 264 (340)
.||.++++.|. .|....-.+-+. .+.++.+.+=+..|.
T Consensus 124 ~Gy~iiiiG~~-------~HpEV~G~~G~~~~~~g~~~vV~~~edv~~l~ 166 (328)
T 3szu_A 124 RGEESILIGHA-------GHPQVEGTMGQYSNPEGGMYLVESPDDVWKLT 166 (328)
T ss_dssp HTCEEEEESCT-------TCHHHHHHHTTCCCTTSCEEEECSHHHHHHCC
T ss_pred CCCEEEEEccC-------CCceEEeecccccCCCCcEEEECCHHHHHhCC
Confidence 99999999885 344444444443 244555555445453
No 36
>1tzj_A ACC deaminase, 1-aminocyclopropane-1-carboxylate deaminase; substrate, PLP, crystal, complex, hydrolase; HET: PLP; 1.99A {Pseudomonas SP} SCOP: c.79.1.1 PDB: 1rqx_A* 1tz2_A* 1tyz_A* 1tzk_A* 1tzm_A*
Probab=36.29 E-value=57 Score=29.99 Aligned_cols=65 Identities=11% Similarity=-0.033 Sum_probs=42.4
Q ss_pred HHhCCCcEEEEEeecCChhHHHHHHHHHhCCCeEEEECCCCCCCC--HHHHHHHHHHHHhcCcEEec
Q psy8942 191 LEAKKVTDVYVCGLAYDVCVGASAIDAITIGYRTILIEDCCRGMD--LDDIERTRNTILENYGSCVQ 255 (340)
Q Consensus 191 L~~~gi~~lii~Gv~T~~CV~~Ta~dA~~~Gy~V~vv~Da~~s~~--~~~~~~al~~l~~~g~~v~t 255 (340)
+.+.|.++|+-+|-.+..--.+.|..|..+|++++++.....+.. ......-++.|+..|+.|+-
T Consensus 62 a~~~g~~~vv~~GassGN~g~alA~~a~~~G~~~~iv~p~~~~~~~~~~~~~~k~~~~~~~GA~V~~ 128 (338)
T 1tzj_A 62 ALAQGCDTLVSIGGIQSNQTRQVAAVAAHLGMKCVLVQENWVNYSDAVYDRVGNIQMSRILGADVRL 128 (338)
T ss_dssp HHHTTCCEEEEEEETTCHHHHHHHHHHHHHTCEEEEEEECCSSCCCTTTTTSHHHHHHHHTTCEEEE
T ss_pred HHHcCCCEEEEcCCchhHHHHHHHHHHHHhCCceEEEecCCCCccccccccCccHHHHHhCCCEEEE
Confidence 345788888888766666666777778999999988776554432 10111235566777887653
No 37
>4d9b_A D-cysteine desulfhydrase; fold type II PLP-dependent enzyme or tryptophan synthase BET like family, PLP dependent enzyme, lyase; HET: PMP; 1.67A {Salmonella typhimurium} PDB: 4d96_A* 4d9c_A* 4d9e_A* 4d9f_A* 4d97_A* 4d8w_A* 4d8u_A* 4d8t_A* 4d92_A* 4d99_A*
Probab=36.09 E-value=1.2e+02 Score=27.88 Aligned_cols=65 Identities=9% Similarity=-0.007 Sum_probs=43.8
Q ss_pred HHhCCCcEEEEEee-cCChhHHHHHHHHHhCCCeEEEECCCCCCCCH-H-HHHHHHHHHHhcCcEEecH
Q psy8942 191 LEAKKVTDVYVCGL-AYDVCVGASAIDAITIGYRTILIEDCCRGMDL-D-DIERTRNTILENYGSCVQS 256 (340)
Q Consensus 191 L~~~gi~~lii~Gv-~T~~CV~~Ta~dA~~~Gy~V~vv~Da~~s~~~-~-~~~~al~~l~~~g~~v~ts 256 (340)
.++.|.++|+-+|- ..|.+ .+.|..|..+|++++++.....+... . ....-++.++..|+.|+-.
T Consensus 76 a~~~G~~~vv~~s~tsGN~g-~alA~aa~~~G~~~~iv~p~~~~~~~~~~~~~~k~~~~~~~GA~V~~~ 143 (342)
T 4d9b_A 76 ALREGADTLITAGAIQSNHV-RQTAAVAAKLGLHCVALLENPIGTTAENYLTNGNRLLLDLFNTQIEMC 143 (342)
T ss_dssp HHHTTCCEEEEEEETTCHHH-HHHHHHHHHHTCEEEEEEECTTCCCCHHHHHSHHHHHHHHTTCEEEEC
T ss_pred HHHcCCCEEEEcCCcccHHH-HHHHHHHHHhCCcEEEEEeCCCCCccccccccchHHHHHHCCCEEEEE
Confidence 35688999998885 55555 56677799999999888876554432 1 1123456677788886533
No 38
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=30.15 E-value=1.2e+02 Score=26.32 Aligned_cols=60 Identities=12% Similarity=0.143 Sum_probs=30.2
Q ss_pred CchHHHHHHhCCCcEEEEEeecCChhHHHHHHHHHhCC-CeEEE-ECCCCCCCCHHHHHHHHHHHHh
Q psy8942 184 RTSLAKQLEAKKVTDVYVCGLAYDVCVGASAIDAITIG-YRTIL-IEDCCRGMDLDDIERTRNTILE 248 (340)
Q Consensus 184 ~t~L~~~L~~~gi~~lii~Gv~T~~CV~~Ta~dA~~~G-y~V~v-v~Da~~s~~~~~~~~al~~l~~ 248 (340)
+..+...|.+.|.+ |++++-..+- .........+.+ -++.+ ..|.+ +.+..+.+++.+..
T Consensus 36 G~~~a~~l~~~G~~-V~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~Dl~---~~~~v~~~~~~~~~ 97 (266)
T 3o38_A 36 GSTTARRALLEGAD-VVISDYHERR-LGETRDQLADLGLGRVEAVVCDVT---STEAVDALITQTVE 97 (266)
T ss_dssp HHHHHHHHHHTTCE-EEEEESCHHH-HHHHHHHHHTTCSSCEEEEECCTT---CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCE-EEEecCCHHH-HHHHHHHHHhcCCCceEEEEeCCC---CHHHHHHHHHHHHH
Confidence 66777888888865 6665544321 222222222222 23433 34443 45666666665544
No 39
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=29.13 E-value=1.1e+02 Score=27.84 Aligned_cols=41 Identities=12% Similarity=0.043 Sum_probs=20.5
Q ss_pred cEEEEEeecCChhHHHHHHHHHhCCCeEEEECCCCCCCCHHH
Q psy8942 197 TDVYVCGLAYDVCVGASAIDAITIGYRTILIEDCCRGMDLDD 238 (340)
Q Consensus 197 ~~lii~Gv~T~~CV~~Ta~dA~~~Gy~V~vv~Da~~s~~~~~ 238 (340)
+.++|+|...-+. ...|+.+.++|++|++...-..+.+.+.
T Consensus 6 k~vlVTGas~GIG-~aia~~L~~~G~~V~~~~r~~~~r~~~~ 46 (324)
T 3u9l_A 6 KIILITGASSGFG-RLTAEALAGAGHRVYASMRDIVGRNASN 46 (324)
T ss_dssp CEEEESSCSSHHH-HHHHHHHHHTTCEEEEEESCTTTTTHHH
T ss_pred CEEEEECCCcHHH-HHHHHHHHHCCCEEEEecCcccccCHHH
Confidence 3556666544433 3455555666666655433333334433
No 40
>2o8r_A Polyphosphate kinase; structural genomics, protein structure initiative, PSI, nysgrc, NEW YORK structural genomics research consortium; HET: MSE; 2.70A {Porphyromonas gingivalis} SCOP: a.7.15.1 d.322.1.2 d.136.1.4 d.136.1.4
Probab=27.72 E-value=66 Score=33.52 Aligned_cols=49 Identities=10% Similarity=0.003 Sum_probs=36.1
Q ss_pred CChhHHHHHHHHHhCCCeEEEECCCCCCCCHHHHHHHHHHHHhcCcEEe
Q psy8942 206 YDVCVGASAIDAITIGYRTILIEDCCRGMDLDDIERTRNTILENYGSCV 254 (340)
Q Consensus 206 T~~CV~~Ta~dA~~~Gy~V~vv~Da~~s~~~~~~~~al~~l~~~g~~v~ 254 (340)
.+-=+.....+|.++|-+|.|+-|.-+-++.+.--...+.|.++|+.|+
T Consensus 382 ~ds~Iv~ALi~AA~rGv~V~vLvel~arfdee~ni~wa~~Le~aGv~Vv 430 (705)
T 2o8r_A 382 ENSSIISALEAAAQSGKKVSVFVELKARFDEENNLRLSERMRRSGIRIV 430 (705)
T ss_dssp SCCHHHHHHHHHHHTTCEEEEEECCCSCC----CHHHHHHHHHHTCEEE
T ss_pred CCHHHHHHHHHHHHCCCEEEEEEeCCCCcchhhhHHHHHHHHHCCCEEE
Confidence 4567888889999999999999996666666555555688888898864
No 41
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=27.16 E-value=1.5e+02 Score=25.97 Aligned_cols=69 Identities=7% Similarity=0.055 Sum_probs=45.8
Q ss_pred HHHHhCCCcEEEEEeecCChhHHHHHHHHHhCCCeEEEECCCCCCCCHH---HHHHHHHHHHhcCcEEecHHHHH
Q psy8942 189 KQLEAKKVTDVYVCGLAYDVCVGASAIDAITIGYRTILIEDCCRGMDLD---DIERTRNTILENYGSCVQSDEVK 260 (340)
Q Consensus 189 ~~L~~~gi~~lii~Gv~T~~CV~~Ta~dA~~~Gy~V~vv~Da~~s~~~~---~~~~al~~l~~~g~~v~ts~ev~ 260 (340)
+..++.||++|+|+-...+.. .-+.+++ .|.++++|+=-.+-..+. --+...+.|...|+.|.+..-++
T Consensus 37 era~e~~Ik~iVVAS~sG~TA--~k~~e~~-~~i~lVvVTh~~GF~~pg~~e~~~e~~~~L~~~G~~V~t~tH~l 108 (201)
T 1vp8_A 37 ERAKELGIKHLVVASSYGDTA--MKALEMA-EGLEVVVVTYHTGFVREGENTMPPEVEEELRKRGAKIVRQSHIL 108 (201)
T ss_dssp HHHHHHTCCEEEEECSSSHHH--HHHHHHC-TTCEEEEEECCTTSSSTTCCSSCHHHHHHHHHTTCEEEECCCTT
T ss_pred HHHHHcCCCEEEEEeCCChHH--HHHHHHh-cCCeEEEEeCcCCCCCCCCCcCCHHHHHHHHhCCCEEEEEeccc
Confidence 455668999999986554322 2223344 678999999766654432 23556788999999988766554
No 42
>3bfj_A 1,3-propanediol oxidoreductase; opportunistic pathogens, decamer, structural genomics,struct proteomics in europe, spine; 2.70A {Klebsiella pneumoniae}
Probab=26.61 E-value=2.3e+02 Score=26.47 Aligned_cols=79 Identities=4% Similarity=0.005 Sum_probs=51.5
Q ss_pred chHHHHHHhCCCcE-EEEEeecC-Ch--hHHHHHHHHH-hCCCeEEEECCCCCCCCHHHHHHHHHHHHhcCc--------
Q psy8942 185 TSLAKQLEAKKVTD-VYVCGLAY-DV--CVGASAIDAI-TIGYRTILIEDCCRGMDLDDIERTRNTILENYG-------- 251 (340)
Q Consensus 185 t~L~~~L~~~gi~~-lii~Gv~T-~~--CV~~Ta~dA~-~~Gy~V~vv~Da~~s~~~~~~~~al~~l~~~g~-------- 251 (340)
..|.+.|++.|.++ ++|+|-.. .. -....+.+.+ +.|+++.+..+.....+.+..+.+++.++..++
T Consensus 22 ~~l~~~l~~~g~~~~livtd~~~~~~~~g~~~~v~~~L~~~g~~~~~~~~~~~~p~~~~v~~~~~~~~~~~~d~IIavGG 101 (387)
T 3bfj_A 22 SVVGERCQLLGGKKALLVTDKGLRAIKDGAVDKTLHYLREAGIEVAIFDGVEPNPKDTNVRDGLAVFRREQCDIIVTVGG 101 (387)
T ss_dssp GGHHHHHHHTTCSEEEEECCTTTC--CCSSHHHHHHHHHHTTCEEEEECCCCSSCBHHHHHHHHHHHHHTTCCEEEEEES
T ss_pred HHHHHHHHHcCCCEEEEEECcchhhccchHHHHHHHHHHHcCCeEEEECCccCCCCHHHHHHHHHHHHhcCCCEEEEeCC
Confidence 46778888888544 55554332 23 1566666666 578998888777777788888888888877543
Q ss_pred -EEecHHHHHHHH
Q psy8942 252 -SCVQSDEVKSMV 263 (340)
Q Consensus 252 -~v~ts~ev~~~l 263 (340)
.++++.-.+..+
T Consensus 102 Gsv~D~aK~iA~~ 114 (387)
T 3bfj_A 102 GSPHDCGKGIGIA 114 (387)
T ss_dssp HHHHHHHHHHHHH
T ss_pred cchhhHHHHHHHH
Confidence 355555555554
No 43
>2yfk_A Aspartate/ornithine carbamoyltransferase; transcarbamylase; 2.55A {Enterococcus faecalis}
Probab=25.47 E-value=2.9e+02 Score=26.70 Aligned_cols=79 Identities=8% Similarity=-0.064 Sum_probs=51.4
Q ss_pred hHHHHHHhCCC----c--EEEEEee------cCChhHHHHHHHHHhCCCeEEEECCCCCCCCHHHHHHHHHHHHhcCcEE
Q psy8942 186 SLAKQLEAKKV----T--DVYVCGL------AYDVCVGASAIDAITIGYRTILIEDCCRGMDLDDIERTRNTILENYGSC 253 (340)
Q Consensus 186 ~L~~~L~~~gi----~--~lii~Gv------~T~~CV~~Ta~dA~~~Gy~V~vv~Da~~s~~~~~~~~al~~l~~~g~~v 253 (340)
||..+.+..|. + +|.++|- .++..+.+-+..+...|.+|+++....-...++..+.+.+.....|+.+
T Consensus 172 Dl~TI~E~~G~l~~l~Glkva~vgd~~~s~Gd~nnVa~Sli~~l~~lG~~v~l~~P~~~~~~p~~~~~a~~~a~~~G~~v 251 (418)
T 2yfk_A 172 DALHLIHEFGGIENLKGKKVAMTWAYSPSYGKPLSVPQGIVGLMTRLGMDVVLAHPEGYEIMPEVEEVAKKNAAEFGGNF 251 (418)
T ss_dssp HHHHHHHHTTSSGGGTTCEEEEECCCCSSSCCCSHHHHHHHHHHGGGTCEEEEECCTTCCCCHHHHHHHHHHHHHHSSEE
T ss_pred HHHHHHHHhCCccccCCCEEEEEeccccccCccchHHHHHHHHHHHcCCEEEEECCccccCCHHHHHHHHHHHHHcCCEE
Confidence 44455555662 3 6777772 2223334444445578999999999877778887777777777788766
Q ss_pred ecHHHHHHHHh
Q psy8942 254 VQSDEVKSMVE 264 (340)
Q Consensus 254 ~ts~ev~~~l~ 264 (340)
.-+.++-+++.
T Consensus 252 ~~~~d~~eav~ 262 (418)
T 2yfk_A 252 TKTNSMAEAFK 262 (418)
T ss_dssp EEESCHHHHHT
T ss_pred EEEcCHHHHhc
Confidence 55555555555
No 44
>1exn_A 5'-exonuclease, 5'-nuclease; hydrolase; 2.50A {Enterobacteria phage T5} SCOP: a.60.7.1 c.120.1.2 PDB: 1ut5_A 1ut8_A 1xo1_A
Probab=25.33 E-value=34 Score=31.67 Aligned_cols=45 Identities=13% Similarity=0.009 Sum_probs=40.6
Q ss_pred chHHHHHHh--CCCcEEEEEeecCChhHHHHHHHHHhCCCeEEEECC
Q psy8942 185 TSLAKQLEA--KKVTDVYVCGLAYDVCVGASAIDAITIGYRTILIED 229 (340)
Q Consensus 185 t~L~~~L~~--~gi~~lii~Gv~T~~CV~~Ta~dA~~~Gy~V~vv~D 229 (340)
+.+.++|+. .|+..+..-|...|-++..-|..+...|++|++++.
T Consensus 105 ~~ikell~~~~~gip~i~~~g~EADDviatLa~~~~~~G~~v~IvS~ 151 (290)
T 1exn_A 105 EYLKDAFELCKTTFPTFTIRGVEADDMAAYIVKLIGHLYDHVWLIST 151 (290)
T ss_dssp HHHHHHHHHHTTTSCEECCTTBCHHHHHHHHHHHHGGGSSCEEEECS
T ss_pred HHHHHHHHhhCCCCcEEEECCcCHHHHHHHHHHHHHHCCCcEEEEeC
Confidence 357888999 999999999999999999999999999999998764
No 45
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=24.81 E-value=1.1e+02 Score=27.78 Aligned_cols=65 Identities=12% Similarity=0.209 Sum_probs=47.8
Q ss_pred HHHhCCCcEEEEEeecCChhHHHH-----HHHHHhCCCeEEEECCCCCCCCHHHHHHHHHHHHhcCcEEec
Q psy8942 190 QLEAKKVTDVYVCGLAYDVCVGAS-----AIDAITIGYRTILIEDCCRGMDLDDIERTRNTILENYGSCVQ 255 (340)
Q Consensus 190 ~L~~~gi~~lii~Gv~T~~CV~~T-----a~dA~~~Gy~V~vv~Da~~s~~~~~~~~al~~l~~~g~~v~t 255 (340)
..++.|+ .++..|...+.|+.+- ...+.+.||+++=++|++-+.+.+.....++.+...|-.|.+
T Consensus 63 l~~~~gV-~v~~GGTl~E~~~~qg~~~~yl~~~k~lGf~~iEiS~G~i~l~~~~~~~~I~~~~~~G~~v~~ 132 (251)
T 1qwg_A 63 YYKDWGI-KVYPGGTLFEYAYSKGKFDEFLNECEKLGFEAVEISDGSSDISLEERNNAIKRAKDNGFMVLT 132 (251)
T ss_dssp HHHTTTC-EEEECHHHHHHHHHTTCHHHHHHHHHHHTCCEEEECCSSSCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHcCC-eEECCcHHHHHHHHcCcHHHHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHHHHCCCEEee
Confidence 3344554 3455555566655554 444667899999999999999999999999999998777654
No 46
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=24.75 E-value=1.8e+02 Score=25.10 Aligned_cols=13 Identities=8% Similarity=0.164 Sum_probs=7.9
Q ss_pred ccchhhHHHHHHh
Q psy8942 295 SNNSTSQNIITLL 307 (340)
Q Consensus 295 s~~~~~~~~~~~~ 307 (340)
.|..+|-++..|.
T Consensus 178 ~Y~asKaa~~~l~ 190 (262)
T 3rkr_A 178 AYTASKWGLNGLM 190 (262)
T ss_dssp HHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHH
Confidence 3666666666663
No 47
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=24.11 E-value=1.2e+02 Score=26.97 Aligned_cols=61 Identities=16% Similarity=0.074 Sum_probs=24.0
Q ss_pred chHHHHHHhCCCcEEEEEeecCChhHHHHHHHHHhCCCeEEEECCCCCCCCHHHHHHHHHHHHhc
Q psy8942 185 TSLAKQLEAKKVTDVYVCGLAYDVCVGASAIDAITIGYRTILIEDCCRGMDLDDIERTRNTILEN 249 (340)
Q Consensus 185 t~L~~~L~~~gi~~lii~Gv~T~~CV~~Ta~dA~~~Gy~V~vv~Da~~s~~~~~~~~al~~l~~~ 249 (340)
......|-+.|. +|++++...+ -...++....+.|.++..+. |.-.+++..+.+++.....
T Consensus 23 ~aia~~la~~Ga-~Vvi~~~~~~-~~~~~~~~l~~~g~~~~~~~--~Dv~~~~~v~~~~~~~~~~ 83 (255)
T 4g81_D 23 FAYAEGLAAAGA-RVILNDIRAT-LLAESVDTLTRKGYDAHGVA--FDVTDELAIEAAFSKLDAE 83 (255)
T ss_dssp HHHHHHHHHTTC-EEEECCSCHH-HHHHHHHHHHHTTCCEEECC--CCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHCCC-EEEEEECCHH-HHHHHHHHHHhcCCcEEEEE--eeCCCHHHHHHHHHHHHHH
Confidence 334444444454 2444444322 12233333344444444332 1222344444444444443
No 48
>1t57_A Conserved protein MTH1675; structural genomics, FMN; HET: FMN; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.49.1.2
Probab=24.07 E-value=1.9e+02 Score=25.35 Aligned_cols=66 Identities=9% Similarity=0.094 Sum_probs=45.4
Q ss_pred HHHHhCCCcEEEEEeecCChhHHHHHHHHHh--CCCeEEEECCCCCCCCHH---HHHHHHHHHHhcCcEEecHHHHH
Q psy8942 189 KQLEAKKVTDVYVCGLAYDVCVGASAIDAIT--IGYRTILIEDCCRGMDLD---DIERTRNTILENYGSCVQSDEVK 260 (340)
Q Consensus 189 ~~L~~~gi~~lii~Gv~T~~CV~~Ta~dA~~--~Gy~V~vv~Da~~s~~~~---~~~~al~~l~~~g~~v~ts~ev~ 260 (340)
+..++.||++|+|+-... .||+-|++ .| ++++|+=-.+-..+. --+...+.|...|+.|.+..-++
T Consensus 45 era~e~~Ik~iVVASssG-----~TA~k~~e~~~~-~lVvVTh~~GF~~pg~~e~~~e~~~~L~~~G~~V~t~tH~l 115 (206)
T 1t57_A 45 ERADQLGIRNFVVASVSG-----ETALRLSEMVEG-NIVSVTHHAGFREKGQLELEDEARDALLERGVNVYAGSHAL 115 (206)
T ss_dssp HHHHHHTCCEEEEECSSS-----HHHHHHHTTCCS-EEEEECCCTTSSSTTCCSSCHHHHHHHHHHTCEEECCSCTT
T ss_pred HHHHHcCCCEEEEEeCCC-----HHHHHHHHHccC-CEEEEeCcCCCCCCCCCcCCHHHHHHHHhCCCEEEEeeccc
Confidence 455568999999986544 46665555 34 999999766654432 23556788899999988776554
No 49
>3p52_A NH(3)-dependent NAD(+) synthetase; structural genomics, center for structural genomics of infec diseases, NADE, CSGI; 2.74A {Campylobacter jejuni} SCOP: c.26.2.0
Probab=23.82 E-value=3.6e+02 Score=23.67 Aligned_cols=78 Identities=5% Similarity=0.015 Sum_probs=47.5
Q ss_pred chHHHHHHhCCCcEEEEEeecCChhHHHHHHHH--HhC-CCeEEEECCCCCCCCHHHHHHHHHHHHhcCcE--EecHHHH
Q psy8942 185 TSLAKQLEAKKVTDVYVCGLAYDVCVGASAIDA--ITI-GYRTILIEDCCRGMDLDDIERTRNTILENYGS--CVQSDEV 259 (340)
Q Consensus 185 t~L~~~L~~~gi~~lii~Gv~T~~CV~~Ta~dA--~~~-Gy~V~vv~Da~~s~~~~~~~~al~~l~~~g~~--v~ts~ev 259 (340)
..|.+++++.|.+.++| |+ +..+.+++..+ .+. |++|..+.=-.+..+.+..+.+.+.....|.. +++..++
T Consensus 15 ~~l~d~v~~~g~~~vvv-~l--SGGiDSsv~a~l~~~~~g~~v~av~~~~~~~~~~~~~~a~~~a~~lgi~~~~v~i~~~ 91 (249)
T 3p52_A 15 DFIQEKVKNSQSQGVVL-GL--SGGIDSALVATLCKRALKENVFALLMPTQISNKANLEDALRLCADLNLEYKIIEIQSI 91 (249)
T ss_dssp HHHHHHHHTSSCSEEEE-EC--CSSHHHHHHHHHHHHHHTTSEEEEECCSCCSSCHHHHHHHHHHHHHTCEEEECCCHHH
T ss_pred HHHHHHHHHhCCCCEEE-Ec--CCCHHHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHHHHhCCCEEEEECcHH
Confidence 56788889999888665 34 44555554443 233 88887665333333445555565555666654 6777776
Q ss_pred HHHHhc
Q psy8942 260 KSMVEG 265 (340)
Q Consensus 260 ~~~l~~ 265 (340)
..++..
T Consensus 92 ~~~~~~ 97 (249)
T 3p52_A 92 LDAFIK 97 (249)
T ss_dssp HHHHHT
T ss_pred HHHHHH
Confidence 666554
No 50
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=23.46 E-value=2e+02 Score=25.53 Aligned_cols=61 Identities=15% Similarity=0.138 Sum_probs=29.7
Q ss_pred CchHHHHHHhCCCcEEEEEeecC-----------ChhHHHHHHHHHhCCCeEEEE-CCCCCCCCHHHHHHHHHHHHh
Q psy8942 184 RTSLAKQLEAKKVTDVYVCGLAY-----------DVCVGASAIDAITIGYRTILI-EDCCRGMDLDDIERTRNTILE 248 (340)
Q Consensus 184 ~t~L~~~L~~~gi~~lii~Gv~T-----------~~CV~~Ta~dA~~~Gy~V~vv-~Da~~s~~~~~~~~al~~l~~ 248 (340)
+..+...|.+.|.+ |++++... .--...++......|-++..+ .|. .+.+..+.+++.+..
T Consensus 41 G~aia~~la~~G~~-V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv---~~~~~v~~~~~~~~~ 113 (299)
T 3t7c_A 41 GRSHAITLAREGAD-IIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDV---RDFDAMQAAVDDGVT 113 (299)
T ss_dssp HHHHHHHHHHTTCE-EEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCT---TCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCE-EEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCC---CCHHHHHHHHHHHHH
Confidence 56677777777764 45554431 112233333344455555443 333 245555555555443
No 51
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=23.17 E-value=1.5e+02 Score=25.74 Aligned_cols=31 Identities=13% Similarity=0.099 Sum_probs=21.4
Q ss_pred cEEEEEeecCChh-HHHHHHHHHhCCCeEEEE
Q psy8942 197 TDVYVCGLAYDVC-VGASAIDAITIGYRTILI 227 (340)
Q Consensus 197 ~~lii~Gv~T~~C-V~~Ta~dA~~~Gy~V~vv 227 (340)
|.++|+|..+.-. =..+|+...++|++|++.
T Consensus 7 K~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~ 38 (256)
T 4fs3_A 7 KTYVIMGIANKRSIAFGVAKVLDQLGAKLVFT 38 (256)
T ss_dssp CEEEEECCCSTTCHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEECCCCCchHHHHHHHHHHHCCCEEEEE
Confidence 5677888765433 356777777888887765
No 52
>1oj7_A Hypothetical oxidoreductase YQHD; structural genomics; HET: NZQ; 2.0A {Escherichia coli} SCOP: e.22.1.2
Probab=23.05 E-value=1.1e+02 Score=28.95 Aligned_cols=78 Identities=12% Similarity=0.112 Sum_probs=53.5
Q ss_pred chHHHHHHhCCCcEEEEEee--cCChhHHHHHHHHHhCCCeEEEECCCCCCCCHHHHHHHHHHHHhcCc---------EE
Q psy8942 185 TSLAKQLEAKKVTDVYVCGL--AYDVCVGASAIDAITIGYRTILIEDCCRGMDLDDIERTRNTILENYG---------SC 253 (340)
Q Consensus 185 t~L~~~L~~~gi~~lii~Gv--~T~~CV~~Ta~dA~~~Gy~V~vv~Da~~s~~~~~~~~al~~l~~~g~---------~v 253 (340)
..|.+.++ .|.+-++|+|- ....+....+.+.++ |+++.+..+.....+.+..+.+++.++..++ .+
T Consensus 41 ~~l~~~l~-~g~r~liVtd~~~~~~~g~~~~v~~~L~-g~~~~~f~~v~~~p~~~~v~~~~~~~~~~~~D~IIavGGGsv 118 (408)
T 1oj7_A 41 AGLREQIP-HDARVLITYGGGSVKKTGVLDQVLDALK-GMDVLEFGGIEPNPAYETLMNAVKLVREQKVTFLLAVGGGSV 118 (408)
T ss_dssp GGHHHHSC-TTCEEEEEECSSHHHHHSHHHHHHHHTT-TSEEEEECCCCSSCBHHHHHHHHHHHHHHTCCEEEEEESHHH
T ss_pred HHHHHHHh-cCCEEEEEECCchhhhccHHHHHHHHhC-CCEEEEeCCcCCCcCHHHHHHHHHHHHHcCCCEEEEeCCchH
Confidence 35677777 67555666652 222346777778887 9999888888888888888888888776543 45
Q ss_pred ecHHHHHHHHh
Q psy8942 254 VQSDEVKSMVE 264 (340)
Q Consensus 254 ~ts~ev~~~l~ 264 (340)
+++.-.+..+-
T Consensus 119 iD~AK~iA~~~ 129 (408)
T 1oj7_A 119 LDGTKFIAAAA 129 (408)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHH
Confidence 66666666553
No 53
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=22.75 E-value=2.1e+02 Score=24.81 Aligned_cols=60 Identities=13% Similarity=0.212 Sum_probs=25.9
Q ss_pred CchHHHHHHhCCCcEEEEEeecCChhHHHHHHHHHhCCCeEEEE-CCCCCCCCHHHHHHHHHHHHh
Q psy8942 184 RTSLAKQLEAKKVTDVYVCGLAYDVCVGASAIDAITIGYRTILI-EDCCRGMDLDDIERTRNTILE 248 (340)
Q Consensus 184 ~t~L~~~L~~~gi~~lii~Gv~T~~CV~~Ta~dA~~~Gy~V~vv-~Da~~s~~~~~~~~al~~l~~ 248 (340)
+..+...|.+.|.+ |++++-..+- ....+....+.|-++..+ .|. .+.+..+.+++.+.+
T Consensus 24 G~aia~~l~~~G~~-V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~Dv---~~~~~v~~~~~~~~~ 84 (264)
T 3ucx_A 24 GTTLARRCAEQGAD-LVLAARTVER-LEDVAKQVTDTGRRALSVGTDI---TDDAQVAHLVDETMK 84 (264)
T ss_dssp HHHHHHHHHHTTCE-EEEEESCHHH-HHHHHHHHHHTTCCEEEEECCT---TCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCcCE-EEEEeCCHHH-HHHHHHHHHhcCCcEEEEEcCC---CCHHHHHHHHHHHHH
Confidence 55566666666653 4554443221 122222333344444433 232 234455555554444
No 54
>1xdp_A Polyphosphate kinase; PPK, PPK complex with AMPPNP, AMPPNP, transferase; HET: ATP; 2.50A {Escherichia coli} SCOP: a.7.15.1 d.322.1.2 d.136.1.4 d.136.1.4 PDB: 1xdo_A*
Probab=22.36 E-value=1.2e+02 Score=31.29 Aligned_cols=68 Identities=13% Similarity=0.035 Sum_probs=44.1
Q ss_pred hHHHHHHhC----CCcEEEEEeec--CChhHHHHHHHHHhCCCeEEEECCCCCCCCHHHHHHHHHHHHhcCcEE
Q psy8942 186 SLAKQLEAK----KVTDVYVCGLA--YDVCVGASAIDAITIGYRTILIEDCCRGMDLDDIERTRNTILENYGSC 253 (340)
Q Consensus 186 ~L~~~L~~~----gi~~lii~Gv~--T~~CV~~Ta~dA~~~Gy~V~vv~Da~~s~~~~~~~~al~~l~~~g~~v 253 (340)
.+.+.+++. .+.+|.++-.. .+--+......|.++|-+|.|+.|..+.++........+.|..+|+.|
T Consensus 351 ~v~~~I~~A~~dp~v~~I~it~Y~~~~d~~I~~AL~~AA~rGV~VrVLvd~~a~~~~~~n~~~~~~L~~aGV~V 424 (687)
T 1xdp_A 351 HVLELLRQASFDPSVLAIKINIYRVAKDSRIIDSMIHAAHNGKKVTVVVELQARFDEEANIHWAKRLTEAGVHV 424 (687)
T ss_dssp HHHHHHHHHHHCTTEEEEEEEESSCCTTCHHHHHHHHHHHTTCEEEEEECTTCSSTTTTTTTTTHHHHHHTCEE
T ss_pred hHHHHHHHHhhCCcceEEEEEeeeecCcHHHHHHHHHHHhcCCEEEEEECCCcccchhhHHHHHHHHHHCCCEE
Confidence 344455543 23466664433 467788888899999999999999988665433333345555556554
No 55
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=22.25 E-value=2.6e+02 Score=23.71 Aligned_cols=61 Identities=16% Similarity=0.172 Sum_probs=30.6
Q ss_pred CchHHHHHHhCCCcEEEEEeecCChhHHHHHHHHHhCCCeEEEECCCCCCCCHHHHHHHHHHHHh
Q psy8942 184 RTSLAKQLEAKKVTDVYVCGLAYDVCVGASAIDAITIGYRTILIEDCCRGMDLDDIERTRNTILE 248 (340)
Q Consensus 184 ~t~L~~~L~~~gi~~lii~Gv~T~~CV~~Ta~dA~~~Gy~V~vv~Da~~s~~~~~~~~al~~l~~ 248 (340)
+..+...|.+.|.+ |++++-..+ -....+......|-++.++. +.-.+.+..+.+++.+.+
T Consensus 22 G~~~a~~l~~~G~~-V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~--~D~~~~~~~~~~~~~~~~ 82 (253)
T 3qiv_A 22 GQAYAEALAREGAA-VVVADINAE-AAEAVAKQIVADGGTAISVA--VDVSDPESAKAMADRTLA 82 (253)
T ss_dssp HHHHHHHHHHTTCE-EEEEESCHH-HHHHHHHHHHHTTCEEEEEE--CCTTSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCE-EEEEcCCHH-HHHHHHHHHHhcCCcEEEEE--ccCCCHHHHHHHHHHHHH
Confidence 66777777777764 666554322 22223333334455554442 222345555555555444
No 56
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=22.00 E-value=1.4e+02 Score=25.87 Aligned_cols=21 Identities=19% Similarity=0.253 Sum_probs=13.0
Q ss_pred CchHHHHHHhCCCcEEEEEeec
Q psy8942 184 RTSLAKQLEAKKVTDVYVCGLA 205 (340)
Q Consensus 184 ~t~L~~~L~~~gi~~lii~Gv~ 205 (340)
+..+...|.+.|. +|++++-.
T Consensus 23 G~aia~~l~~~G~-~V~~~~r~ 43 (262)
T 3pk0_A 23 GRGIATVFARAGA-NVAVAGRS 43 (262)
T ss_dssp HHHHHHHHHHTTC-EEEEEESC
T ss_pred HHHHHHHHHHCCC-EEEEEeCC
Confidence 5666677777776 45555543
No 57
>3maj_A DNA processing chain A; MCSG, PSI-2, structural genomics, protein structure initiati midwest center for structural genomics; HET: DNA; 2.05A {Rhodopseudomonas palustris}
Probab=21.94 E-value=1.4e+02 Score=28.69 Aligned_cols=65 Identities=14% Similarity=0.091 Sum_probs=45.4
Q ss_pred cEEEEEeecCChhHHHHHHHHHhCCCeEEEECCCCCCCCHHHHHHHHHHHHhcCcE-EecHHHHHHHHhc
Q psy8942 197 TDVYVCGLAYDVCVGASAIDAITIGYRTILIEDCCRGMDLDDIERTRNTILENYGS-CVQSDEVKSMVEG 265 (340)
Q Consensus 197 ~~lii~Gv~T~~CV~~Ta~dA~~~Gy~V~vv~Da~~s~~~~~~~~al~~l~~~g~~-v~ts~ev~~~l~~ 265 (340)
+-++|+-......-+.||.-|.+.|-+|++|--.+.+... ..-..|.+.|+. |++.++++++|..
T Consensus 238 ~~vvVvEA~~kSGsliTA~~Ale~gR~VfavPG~i~~~~s----~G~n~LI~~GA~lv~~~~Dil~~l~~ 303 (382)
T 3maj_A 238 VGVAVIEAAYRSGSLITARRAADQGREVFAVPGSPLDPRA----AGTNDLIKQGATLITSASDIVEAVAS 303 (382)
T ss_dssp SCEEECCCCTTCTHHHHHHHHHHHTCCEEECCCCTTCGGG----HHHHHHHHTTCEECSSHHHHHHHHTT
T ss_pred CceEEEecCCCCcHHHHHHHHHHhCCcEEEEcCCCCCccc----ccHHHHHHCCCEEECCHHHHHHHhhh
Confidence 4556666666677899999999999999998754433222 223444455887 5668899999864
No 58
>1vlj_A NADH-dependent butanol dehydrogenase; TM0820, structural G JCSG, protein structure initiative, PSI, joint center for S genomics; HET: NAP; 1.78A {Thermotoga maritima} SCOP: e.22.1.2
Probab=21.87 E-value=3.2e+02 Score=25.80 Aligned_cols=80 Identities=10% Similarity=0.130 Sum_probs=52.3
Q ss_pred chHHHHHHhCCC-cEEEEEe-ecCCh-hHHHHHHHHH-hCCCeEEEECCCCCCCCHHHHHHHHHHHHhcCc---------
Q psy8942 185 TSLAKQLEAKKV-TDVYVCG-LAYDV-CVGASAIDAI-TIGYRTILIEDCCRGMDLDDIERTRNTILENYG--------- 251 (340)
Q Consensus 185 t~L~~~L~~~gi-~~lii~G-v~T~~-CV~~Ta~dA~-~~Gy~V~vv~Da~~s~~~~~~~~al~~l~~~g~--------- 251 (340)
..|.+.|++.|. +-++|+| -.... .....+.+.+ +.|+++.+..+.....+.+..+.+++.++..++
T Consensus 32 ~~l~~~l~~~g~~r~liVtd~~~~~~~g~~~~v~~~L~~~g~~~~~f~~v~~~p~~~~v~~~~~~~~~~~~D~IIavGGG 111 (407)
T 1vlj_A 32 PKIGEEIKNAGIRKVLFLYGGGSIKKNGVYDQVVDSLKKHGIEWVEVSGVKPNPVLSKVHEAVEVAKKEKVEAVLGVGGG 111 (407)
T ss_dssp GGHHHHHHHTTCCEEEEEECSSHHHHSSHHHHHHHHHHHTTCEEEEECCCCSSCBHHHHHHHHHHHHHTTCSEEEEEESH
T ss_pred HHHHHHHHHcCCCeEEEEECchHHhhccHHHHHHHHHHHcCCeEEEecCccCCCCHHHHHHHHHHHHhcCCCEEEEeCCh
Confidence 467788888884 4555655 22222 2455566655 568998888777777788888888888876543
Q ss_pred EEecHHHHHHHHh
Q psy8942 252 SCVQSDEVKSMVE 264 (340)
Q Consensus 252 ~v~ts~ev~~~l~ 264 (340)
.++++.-.+..+-
T Consensus 112 sviD~AK~iA~~~ 124 (407)
T 1vlj_A 112 SVVDSAKAVAAGA 124 (407)
T ss_dssp HHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHH
Confidence 3555665565554
No 59
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=21.62 E-value=99 Score=23.97 Aligned_cols=46 Identities=7% Similarity=0.035 Sum_probs=31.4
Q ss_pred chHHHHHHhCCCcEEEEEeecCChhH-HHHHHHHHhCCCeEEEECCC
Q psy8942 185 TSLAKQLEAKKVTDVYVCGLAYDVCV-GASAIDAITIGYRTILIEDC 230 (340)
Q Consensus 185 t~L~~~L~~~gi~~lii~Gv~T~~CV-~~Ta~dA~~~Gy~V~vv~Da 230 (340)
.+|.+++++.+++.++|+--..+.-. ..-+..+.+.|++|.++-|-
T Consensus 55 ~~l~~~~~~~~id~viia~~~~~~~~~~~i~~~l~~~gv~v~~vP~~ 101 (141)
T 3nkl_A 55 KYLERLIKKHCISTVLLAVPSASQVQKKVIIESLAKLHVEVLTIPNL 101 (141)
T ss_dssp GGHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHTTTCEEEECCCH
T ss_pred HHHHHHHHHCCCCEEEEeCCCCCHHHHHHHHHHHHHcCCeEEECCCH
Confidence 47888899999999988743333323 33344466789998887764
No 60
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=21.56 E-value=3.4e+02 Score=24.32 Aligned_cols=18 Identities=28% Similarity=0.453 Sum_probs=8.8
Q ss_pred hHHHHHHHHHhCCCeEEE
Q psy8942 209 CVGASAIDAITIGYRTIL 226 (340)
Q Consensus 209 CV~~Ta~dA~~~Gy~V~v 226 (340)
-+...+.++.++|.++.|
T Consensus 76 ~~~~~~~ea~~~Gi~~iV 93 (288)
T 2nu8_A 76 FCKDSILEAIDAGIKLII 93 (288)
T ss_dssp GHHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHHHCCCCEEE
Confidence 344445555555555433
No 61
>4h27_A L-serine dehydratase/L-threonine deaminase; PLP dependent typeii, PLP binding, liver, lyase; HET: LLP; 1.30A {Homo sapiens} PDB: 1p5j_A* 1pwh_A* 1pwe_A*
Probab=21.50 E-value=1.5e+02 Score=27.63 Aligned_cols=59 Identities=10% Similarity=0.004 Sum_probs=39.1
Q ss_pred HHHHhCCCcEEEEEeecCChhHHHHHHHHHhCCCeEEEECCCCCCCCHHHHHHHHHHHHhcCcEEec
Q psy8942 189 KQLEAKKVTDVYVCGLAYDVCVGASAIDAITIGYRTILIEDCCRGMDLDDIERTRNTILENYGSCVQ 255 (340)
Q Consensus 189 ~~L~~~gi~~lii~Gv~T~~CV~~Ta~dA~~~Gy~V~vv~Da~~s~~~~~~~~al~~l~~~g~~v~t 255 (340)
..+.+.|.++|+-++- .|.+ .+.|..|..+|++++++..... +.. -++.++..|+.|+-
T Consensus 86 ~~a~~~g~~~vv~aSs-GN~g-~alA~aa~~~G~~~~iv~p~~~--~~~----k~~~~~~~GA~Vv~ 144 (364)
T 4h27_A 86 KRWAKQGCAHFVCSSS-GNAG-MAAAYAARQLGVPATIVVPGTT--PAL----TIERLKNEGATVKV 144 (364)
T ss_dssp HHHHHTTCCEEEECCS-SHHH-HHHHHHHHHHTCCEEEEEETTS--CHH----HHHHHHTTTCEEEE
T ss_pred HHHHhcCCCEEEEeCC-ChHH-HHHHHHHHHhCCceEEEECCCC--CHH----HHHHHHHcCCEEEE
Confidence 3345578888777665 7777 5577778899999888876542 232 35566667777643
No 62
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=21.32 E-value=1.8e+02 Score=25.35 Aligned_cols=20 Identities=25% Similarity=0.295 Sum_probs=11.4
Q ss_pred CchHHHHHHhCCCcEEEEEee
Q psy8942 184 RTSLAKQLEAKKVTDVYVCGL 204 (340)
Q Consensus 184 ~t~L~~~L~~~gi~~lii~Gv 204 (340)
+..+...|.+.|.+ |++++.
T Consensus 24 G~aia~~l~~~G~~-V~~~~r 43 (281)
T 3svt_A 24 GKGVAAGLVAAGAS-VMIVGR 43 (281)
T ss_dssp HHHHHHHHHHTTCE-EEEEES
T ss_pred HHHHHHHHHHCCCE-EEEEeC
Confidence 55666666666653 555543
No 63
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=21.16 E-value=1.7e+02 Score=26.09 Aligned_cols=61 Identities=10% Similarity=0.131 Sum_probs=36.1
Q ss_pred CchHHHHHHhCCCcEEEEEeecCChhHHHHHHHHHhCCCeEEEE-CCCCCCCCHHHHHHHHHHHHhc
Q psy8942 184 RTSLAKQLEAKKVTDVYVCGLAYDVCVGASAIDAITIGYRTILI-EDCCRGMDLDDIERTRNTILEN 249 (340)
Q Consensus 184 ~t~L~~~L~~~gi~~lii~Gv~T~~CV~~Ta~dA~~~Gy~V~vv-~Da~~s~~~~~~~~al~~l~~~ 249 (340)
+..+...|.+.|.+ |++++-..+. ....+......|.++.++ .|. .+.+..+.+++.+...
T Consensus 44 G~~la~~l~~~G~~-V~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~Dv---~d~~~v~~~~~~~~~~ 105 (301)
T 3tjr_A 44 GLATATEFARRGAR-LVLSDVDQPA-LEQAVNGLRGQGFDAHGVVCDV---RHLDEMVRLADEAFRL 105 (301)
T ss_dssp HHHHHHHHHHTTCE-EEEEESCHHH-HHHHHHHHHHTTCCEEEEECCT---TCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCE-EEEEECCHHH-HHHHHHHHHhcCCceEEEEccC---CCHHHHHHHHHHHHHh
Confidence 78888999888964 7777664432 233333344556665544 343 3456666666665443
No 64
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=20.84 E-value=2.2e+02 Score=25.69 Aligned_cols=21 Identities=19% Similarity=0.268 Sum_probs=13.1
Q ss_pred CchHHHHHHhCCCcEEEEEeec
Q psy8942 184 RTSLAKQLEAKKVTDVYVCGLA 205 (340)
Q Consensus 184 ~t~L~~~L~~~gi~~lii~Gv~ 205 (340)
+..+...|-+.|.+ |++++..
T Consensus 21 G~~la~~l~~~G~~-Vv~~~r~ 41 (319)
T 3ioy_A 21 GIGLVRQLLNQGCK-VAIADIR 41 (319)
T ss_dssp HHHHHHHHHHTTCE-EEEEESC
T ss_pred HHHHHHHHHHCCCE-EEEEECC
Confidence 56677777777763 5555544
No 65
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=20.79 E-value=1.6e+02 Score=25.48 Aligned_cols=12 Identities=25% Similarity=0.213 Sum_probs=6.2
Q ss_pred ccchhhHHHHHH
Q psy8942 295 SNNSTSQNIITL 306 (340)
Q Consensus 295 s~~~~~~~~~~~ 306 (340)
.|..+|-++..|
T Consensus 157 ~Y~asKaa~~~l 168 (250)
T 3nyw_A 157 IYGSTKFALLGL 168 (250)
T ss_dssp HHHHHHHHHHHH
T ss_pred chHHHHHHHHHH
Confidence 355555555544
No 66
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=20.23 E-value=2.5e+02 Score=24.52 Aligned_cols=30 Identities=20% Similarity=0.199 Sum_probs=19.1
Q ss_pred cEEEEEeecCChhHHHHHHHHHhCCCeEEEE
Q psy8942 197 TDVYVCGLAYDVCVGASAIDAITIGYRTILI 227 (340)
Q Consensus 197 ~~lii~Gv~T~~CV~~Ta~dA~~~Gy~V~vv 227 (340)
+.++|+|-..-+. ...|+...++|++|+++
T Consensus 12 k~~lVTGas~gIG-~aia~~la~~G~~V~~~ 41 (286)
T 3uve_A 12 KVAFVTGAARGQG-RSHAVRLAQEGADIIAV 41 (286)
T ss_dssp CEEEEESTTSHHH-HHHHHHHHHTTCEEEEE
T ss_pred CEEEEeCCCchHH-HHHHHHHHHCCCeEEEE
Confidence 4677777655443 45666667777777665
No 67
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=20.12 E-value=1.8e+02 Score=25.47 Aligned_cols=60 Identities=12% Similarity=0.135 Sum_probs=27.9
Q ss_pred CchHHHHHHhCCCcEEEEEeecCChhHHHHHHHHHhCCCeEEEEC-CCCCCCCHHHHHHHHHHHHh
Q psy8942 184 RTSLAKQLEAKKVTDVYVCGLAYDVCVGASAIDAITIGYRTILIE-DCCRGMDLDDIERTRNTILE 248 (340)
Q Consensus 184 ~t~L~~~L~~~gi~~lii~Gv~T~~CV~~Ta~dA~~~Gy~V~vv~-Da~~s~~~~~~~~al~~l~~ 248 (340)
+..+...|.+.|.+ |++++-..+- ....+......|-++..+. |. .+.+..+.+++.+..
T Consensus 17 G~aia~~la~~G~~-V~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~Dv---~d~~~v~~~~~~~~~ 77 (264)
T 3tfo_A 17 GEGIARELGVAGAK-ILLGARRQAR-IEAIATEIRDAGGTALAQVLDV---TDRHSVAAFAQAAVD 77 (264)
T ss_dssp HHHHHHHHHHTTCE-EEEEESSHHH-HHHHHHHHHHTTCEEEEEECCT---TCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCE-EEEEECCHHH-HHHHHHHHHhcCCcEEEEEcCC---CCHHHHHHHHHHHHH
Confidence 55666666666654 5555543221 2223333334455544432 32 234555555554433
Done!