RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy8942
(340 letters)
>d1im5a_ c.33.1.3 (A:) Pyrazinamidase/nicotinamidase {Archaeon
Pyrococcus horikoshii [TaxId: 53953]}
Length = 179
Score = 103 bits (257), Expect = 3e-27
Identities = 63/223 (28%), Positives = 101/223 (45%), Gaps = 47/223 (21%)
Query: 35 PKSALLVINVQNDFVSGTLNMSQRSAKQNGLQVIEPINKLLDTVNFN--AVFYSLDWHPS 92
P+ AL+V+++Q DF+ G G ++I +N+ + + + DWHP
Sbjct: 1 PEEALIVVDMQRDFMPGG-----ALPVPEGDKIIPKVNEYIRKFKEKGALIVATRDWHPE 55
Query: 93 NHISFIDNIKLRKIHYTSTVQPEDAQTYDTVVFDGDTPMKQKLWPRHCVQDSWGAELHKD 152
NHISF + WPRHCVQ++ GAE D
Sbjct: 56 NHISF--------------------------------RERGGPWPRHCVQNTPGAEFVVD 83
Query: 153 LKIVDNAIKVYMGTDPEEDSYSVFWDSKKLKRTSLAKQLEAKKVTDVYVCGLAYDVCVGA 212
L ++A+ + T+P++++YS F + LAK L V VY+CG+A + CV A
Sbjct: 84 LP--EDAVIISKATEPDKEAYSGFEGTD------LAKILRGNGVKRVYICGVATEYCVRA 135
Query: 213 SAIDAITIGYRTILIEDCCRGMDLDDIERTRNTILENYGSCVQ 255
+A+DA+ G+ L+ D +G+ +D ER + VQ
Sbjct: 136 TALDALKHGFEVYLLRDAVKGIKPEDEERALEEMKSRGIKIVQ 178
>d1nf9a_ c.33.1.3 (A:) Phenazine biosynthesis protein PhzD
{Pseudomonas aeruginosa [TaxId: 287]}
Length = 207
Score = 82.2 bits (202), Expect = 5e-19
Identities = 28/226 (12%), Positives = 59/226 (26%), Gaps = 53/226 (23%)
Query: 36 KSALLVINVQNDFVSGTLNMSQRSAKQNGLQVIEPINKLLDTVNFN--AVFYSLDWHPSN 93
++ LLV ++Q F+ + ++ +L + Y+
Sbjct: 31 RAVLLVHDMQRYFLRPL-------PESLRAGLVANAARLRRWCVEQGVQIAYTAQPGSMT 83
Query: 94 HISFIDNIKLRKIHYTSTVQPEDAQTYDTVVFDGDTPMKQKLWPRHCVQDSWGAELHKDL 153
+ + W E+ ++L
Sbjct: 84 E--------------------------------EQRGLLKDFWGPGMRASPADREVVEEL 111
Query: 154 KIVDNAIKVYMGTDPEEDSYSVFWDSKKLKRTSLAKQLEAKKVTDVYVCGLAYDVCVGAS 213
+ + + YS F+ S +++ A + +CG+ V V S
Sbjct: 112 APGPDDWLL------TKWRYSAFFHSDL------LQRMRAAGRDQLVLCGVYAHVGVLIS 159
Query: 214 AIDAITIGYRTILIEDCCRGMDLDDIERTRNTILENYGSCVQSDEV 259
+DA + + L+ D V +DEV
Sbjct: 160 TVDAYSNDIQPFLVADAIADFSEAHHRMALEYAASRCAMVVTTDEV 205
>d1j2ra_ c.33.1.3 (A:) Hypothetical protein YecD {Escherichia coli
[TaxId: 562]}
Length = 188
Score = 78.4 bits (192), Expect = 7e-18
Identities = 31/226 (13%), Positives = 69/226 (30%), Gaps = 51/226 (22%)
Query: 36 KSALLVINVQNDFVSGTLNMSQRSAKQNGLQVIEPINKLLDTVNFN--AVFYSLDWHPSN 93
+AL+VI++Q + +V+ KL + VF ++
Sbjct: 8 TTALVVIDLQEGILPFAG------GPHTADEVVNRAGKLAAKFRASGQPVFLVRVGWSAD 61
Query: 94 HISFIDNIKLRKIHYTSTVQPEDAQTYDTVVFDGDTPMKQKLWPRHCVQDSWGAELHKDL 153
+ + V + L
Sbjct: 62 YAEALKQ-------------------------------PVDAPSPAKVLPENWWQHPAAL 90
Query: 154 KIVDNAIKVYMGTDPEEDSYSVFWDSKKLKRTSLAKQLEAKKVTDVYVCGLAYDVCVGAS 213
D+ I++ + + F+ T L QL + + + +CG++ ++ V ++
Sbjct: 91 GTTDSDIEI------IKRQWGAFYG------TDLELQLRRRGIDTIVLCGISTNIGVEST 138
Query: 214 AIDAITIGYRTILIEDCCRGMDLDDIERTRNTILENYGSCVQSDEV 259
A +A +G+ ++ ED C + + N I +E+
Sbjct: 139 ARNAWELGFNLVIAEDACSAASAEQHNNSINHIYPRIARVRSVEEI 184
>d1nbaa_ c.33.1.3 (A:) N-carbamoylsarcosine amidohydrolase
{Arthrobacter sp. [TaxId: 1667]}
Length = 253
Score = 79.1 bits (194), Expect = 1e-17
Identities = 32/244 (13%), Positives = 72/244 (29%), Gaps = 44/244 (18%)
Query: 36 KSALLVINVQNDFVSGTLNMSQRSAKQNGLQVIEPINKLLDTV--NFNAVFYSLDWHPSN 93
+ A++ I++ N + + +I + ++ + VFY+ + + +
Sbjct: 38 RPAVIHIDLANAWTQPGHPF----SCPGMETIIPNVQRINEAARAKGVPVFYTTNVYRNR 93
Query: 94 HISFIDNIKLRKIHYTSTVQPEDAQTYDTVVFDGDTPMKQKLWPRHCVQDSWGAELHKDL 153
S N K+ DS+ A++ +
Sbjct: 94 DASSGTN--------------------------DMGLWYSKIPTETLPADSYWAQIDDRI 127
Query: 154 KIVDNAIKVYMGTDPEEDSYSVFWDSKKLKRTSLAKQLEAKKVTDVYVCGLAYDVCVGAS 213
D + + T+L L + ++ + V G CV +
Sbjct: 128 APADG------------EVVIEKNRASAFPGTNLELFLTSNRIDTLIVTGATAAGCVRHT 175
Query: 214 AIDAITIGYRTILIEDCCRGMDLDDIERTRNTILENYGSCVQSDEVKSMVEGKDRRPELG 273
DAI G+R I+ + ++ I +G +D V ++ + +
Sbjct: 176 VEDAIAKGFRPIIPRETIGDRVPGVVQWNLYDIDNKFGDVESTDSVVQYLDALPQFEDTV 235
Query: 274 LKLA 277
K
Sbjct: 236 PKTL 239
>d1x9ga_ c.33.1.3 (A:) Ribonuclease MAR1 {Leishmania donovani
[TaxId: 5661]}
Length = 192
Score = 59.3 bits (143), Expect = 3e-11
Identities = 22/229 (9%), Positives = 55/229 (24%), Gaps = 73/229 (31%)
Query: 26 NRWIKVIVRPKSALLVINVQNDFVSGTLNMSQRSAKQNGLQVIEPINKLLDTVNFNAVFY 85
+R + + K+A L +++Q F +N + N+L V
Sbjct: 2 SRLMPHYSKGKTAFLCVDLQEAFSKRI---------ENFANCVFVANRLARL--HEVVPE 50
Query: 86 SLDWHPSNHISFIDNIKLRKIHYTSTVQPEDAQTYDTVVFDGDTPMKQKLWPRHCVQDSW 145
+ + + H + P H ++ +
Sbjct: 51 NTKYIVTEHYPKGLGRIV--------------------------PEITLPKTAHLIEKTR 84
Query: 146 GAELHKDLKIVDNAIKVYMGTDPEEDSYSVFWDSKKLKRTSLAKQLEAKKVTDVYVCGLA 205
+ + ++ + + + V G+
Sbjct: 85 FSCVVPQVEELLEDVD------------------------------------NAVVFGIE 108
Query: 206 YDVCVGASAIDAITIGYRTILIEDCCRGMDLDDIERTRNTILENYGSCV 254
C+ + D + + R L +D D + + +C
Sbjct: 109 GHACILQTVADLLDMNKRVFLPKDGLGSQKKTDFKAAIKLMSSWGPNCE 157
>d1yaca_ c.33.1.3 (A:) YcaC {Escherichia coli [TaxId: 562]}
Length = 204
Score = 57.0 bits (137), Expect = 2e-10
Identities = 20/228 (8%), Positives = 58/228 (25%), Gaps = 67/228 (29%)
Query: 32 IVRPKSALLVINVQNDFVSGTLNMSQRSAKQNGLQVIEPINKLLDTVNFNAVFYSLDWHP 91
+ + +A+L+++ Q +S ++ + + L D + +
Sbjct: 7 LDKNDAAVLLVDHQAGLLSLVRDI-------EPDKFKNNVLALGDLAKYFNLPT------ 53
Query: 92 SNHISFIDNIKLRKIHYTSTVQPEDAQTYDTVVFDGDTPMKQKLWPRHCVQDSWGAELHK 151
+ G + +
Sbjct: 54 -------------------------------------------ILTTSAETGPNGPLVPE 70
Query: 152 DLKIVDNAIKVYMGTDPEEDSYSVFWDSKKLKRTSLAKQLEAKKVTDVYVCGLAYDVCVG 211
+A + + + + + K ++A + + G+ +VCV
Sbjct: 71 LKAQFPDAPYIA-----RPGNINAWDN------EDFVKAVKATGKKQLIIAGVVTEVCVA 119
Query: 212 ASAIDAITIGYRTILIEDCCRGMDLDDIERTRNTILENYGSCVQSDEV 259
A+ AI G+ ++ D + + + + + V
Sbjct: 120 FPALSAIEEGFDVFVVTDASGTFNEITRHSAWDRMSQAGAQLMTWFGV 167
>d1ctda_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId:
9031]}
Length = 34
Score = 30.2 bits (68), Expect = 0.024
Identities = 10/22 (45%), Positives = 12/22 (54%)
Query: 1 MAEKNTLFDWNQDGLIDREEFA 22
+A +FD N DG ID EE
Sbjct: 6 LANAFRIFDKNADGYIDIEELG 27
>d2sasa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein
{Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]}
Length = 185
Score = 29.2 bits (64), Expect = 0.53
Identities = 7/24 (29%), Positives = 10/24 (41%)
Query: 5 NTLFDWNQDGLIDREEFAFCWNRW 28
+ D N DG I +F R+
Sbjct: 15 DFFLDMNHDGSIQDNDFEDMMTRY 38
Score = 28.4 bits (62), Expect = 0.94
Identities = 2/22 (9%), Positives = 5/22 (22%)
Query: 8 FDWNQDGLIDREEFAFCWNRWI 29
D + + R +
Sbjct: 148 ITDGGKVTFDLNRYKELYYRLL 169
>d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId:
9031]}
Length = 75
Score = 27.6 bits (61), Expect = 0.54
Identities = 9/22 (40%), Positives = 10/22 (45%)
Query: 7 LFDWNQDGLIDREEFAFCWNRW 28
+FD N DG ID EE
Sbjct: 17 IFDKNADGFIDIEELGEILRAT 38
Score = 24.1 bits (52), Expect = 8.5
Identities = 8/14 (57%), Positives = 9/14 (64%)
Query: 8 FDWNQDGLIDREEF 21
D N DG ID +EF
Sbjct: 54 SDKNNDGRIDFDEF 67
>d1c07a_ a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: 9606]}
Length = 95
Score = 27.3 bits (60), Expect = 0.97
Identities = 5/16 (31%), Positives = 9/16 (56%)
Query: 7 LFDWNQDGLIDREEFA 22
L D G + +++FA
Sbjct: 52 LCDTKDCGKLSKDQFA 67
>d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale
cress (Arabidopsis thaliana) [TaxId: 3702]}
Length = 67
Score = 26.4 bits (58), Expect = 1.2
Identities = 7/22 (31%), Positives = 11/22 (50%)
Query: 7 LFDWNQDGLIDREEFAFCWNRW 28
FD N+DG + +EF +
Sbjct: 9 KFDKNKDGKLSLDEFREVALAF 30
Score = 25.3 bits (55), Expect = 2.6
Identities = 5/22 (22%), Positives = 12/22 (54%)
Query: 8 FDWNQDGLIDREEFAFCWNRWI 29
D + +G ++ +EF C + +
Sbjct: 46 IDVDGNGELNADEFTSCIEKML 67
>d1fi6a_ a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: 10090]}
Length = 92
Score = 26.9 bits (59), Expect = 1.4
Identities = 6/17 (35%), Positives = 11/17 (64%)
Query: 6 TLFDWNQDGLIDREEFA 22
L D+++DG + +EF
Sbjct: 50 ELSDFDKDGALTLDEFC 66
>d1qv0a_ a.39.1.5 (A:) Calcium-regulated photoprotein {Hydrozoa
(Obelia longissima), obelin [TaxId: 32570]}
Length = 189
Score = 27.7 bits (60), Expect = 1.9
Identities = 6/23 (26%), Positives = 9/23 (39%)
Query: 7 LFDWNQDGLIDREEFAFCWNRWI 29
D N +G I +E + I
Sbjct: 22 FLDINGNGKITLDEIVSKASDDI 44
Score = 25.4 bits (54), Expect = 9.7
Identities = 4/14 (28%), Positives = 7/14 (50%)
Query: 8 FDWNQDGLIDREEF 21
D + G +D +E
Sbjct: 152 CDLDNAGDLDVDEM 165
>d1jfja_ a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histolytica)
[TaxId: 5759]}
Length = 134
Score = 27.0 bits (58), Expect = 1.9
Identities = 6/22 (27%), Positives = 9/22 (40%)
Query: 7 LFDWNQDGLIDREEFAFCWNRW 28
D N DG + EE ++
Sbjct: 8 EIDVNGDGAVSYEEVKAFVSKK 29
Score = 25.5 bits (54), Expect = 7.6
Identities = 8/14 (57%), Positives = 8/14 (57%)
Query: 8 FDWNQDGLIDREEF 21
D N DG I EEF
Sbjct: 116 ADANGDGYITLEEF 129
>d2scpa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein
{Sandworm (Nereis diversicolor) [TaxId: 126592]}
Length = 174
Score = 27.3 bits (59), Expect = 2.0
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 7 LFDWNQDGLIDREEFAFCWNRWIK 30
D+++DG I R +F R+ K
Sbjct: 14 RIDFDKDGAITRMDFESMAERFAK 37
Score = 25.4 bits (54), Expect = 8.5
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 8 FDWNQDGLIDREEFAFCWNRW 28
D N DGL+ EEF + +
Sbjct: 137 IDTNNDGLLSLEEFVIAGSDF 157
>d1vqow1 d.59.1.1 (W:1-154) Archaeal L30 (L30a) {Archaeon Haloarcula
marismortui [TaxId: 2238]}
Length = 154
Score = 27.1 bits (60), Expect = 2.1
Identities = 11/74 (14%), Positives = 24/74 (32%), Gaps = 6/74 (8%)
Query: 218 ITIGY---RTI--LIEDCCRGMDLDDIERTRNTILENYGSCVQSDEVKSMVEGKDRRPEL 272
+ G T+ ++ ++ D + + E+ S +++ + E
Sbjct: 52 VAFGEPSQETLETVLATRAEPLE-GDADVDDEWVAEHTDYDDISGLAFALLSEETTLREQ 110
Query: 273 GLKLALELKAKCIG 286
GL L L G
Sbjct: 111 GLSPTLRLHPPRGG 124
>d1uhka1 a.39.1.5 (A:3-189) Calcium-regulated photoprotein
{Jellyfish (Aequorea aequorea), aequorin [TaxId:
168712]}
Length = 187
Score = 27.2 bits (59), Expect = 2.3
Identities = 5/23 (21%), Positives = 10/23 (43%)
Query: 7 LFDWNQDGLIDREEFAFCWNRWI 29
D N +G I +E + + +
Sbjct: 20 FLDVNHNGKISLDEMVYKASDIV 42
Score = 25.7 bits (55), Expect = 6.5
Identities = 4/14 (28%), Positives = 8/14 (57%)
Query: 8 FDWNQDGLIDREEF 21
D ++ G +D +E
Sbjct: 150 CDIDESGQLDVDEM 163
>d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus),
cardiac isoform [TaxId: 9031]}
Length = 81
Score = 25.7 bits (56), Expect = 2.3
Identities = 9/22 (40%), Positives = 10/22 (45%)
Query: 7 LFDWNQDGLIDREEFAFCWNRW 28
+FD N DG ID EE
Sbjct: 23 MFDKNADGYIDLEELKIMLQAT 44
Score = 24.5 bits (53), Expect = 7.5
Identities = 8/14 (57%), Positives = 9/14 (64%)
Query: 8 FDWNQDGLIDREEF 21
D N DG ID +EF
Sbjct: 60 GDKNNDGRIDYDEF 73
>d1s6ia_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD
{Soybean (Glycine max) [TaxId: 3847]}
Length = 182
Score = 27.3 bits (59), Expect = 2.3
Identities = 5/22 (22%), Positives = 8/22 (36%)
Query: 7 LFDWNQDGLIDREEFAFCWNRW 28
+ D + G I +E R
Sbjct: 18 MIDTDNSGTITFDELKDGLKRV 39
>d1nyaa_ a.39.1.5 (A:) Calerythrin {Saccharopolyspora erythraea
[TaxId: 1836]}
Length = 176
Score = 26.9 bits (58), Expect = 2.5
Identities = 4/24 (16%), Positives = 12/24 (50%)
Query: 7 LFDWNQDGLIDREEFAFCWNRWIK 30
+D++ +G ++R +F +
Sbjct: 15 RWDFDGNGALERADFEKEAQHIAE 38
Score = 26.1 bits (56), Expect = 4.5
Identities = 4/14 (28%), Positives = 7/14 (50%)
Query: 8 FDWNQDGLIDREEF 21
D N +G + +E
Sbjct: 145 VDTNGNGELSLDEL 158
>d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 146
Score = 26.7 bits (58), Expect = 2.9
Identities = 7/22 (31%), Positives = 9/22 (40%)
Query: 7 LFDWNQDGLIDREEFAFCWNRW 28
LFD + +G I E A
Sbjct: 18 LFDKDNNGSISSSELATVMRSL 39
>d1ggwa_ a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharomyces
pombe) [TaxId: 4896]}
Length = 140
Score = 26.5 bits (57), Expect = 3.3
Identities = 5/22 (22%), Positives = 7/22 (31%)
Query: 7 LFDWNQDGLIDREEFAFCWNRW 28
LFD + G I +
Sbjct: 13 LFDRHGTGRIPKTSIGDLLRAC 34
>gi|148225444|ref|NP_001084009.1|(23-166:170) myosin light chain,
phosphorylatable, fast skeletal muscle [Xenopus laevis]
gi|27371289|gb|AAH41503.1| Mylpf-prov protein
[Xenopus laevis] gi|32450381|gb|AAH53808.1|
Mylpf-prov protein [Xenopus laevis]
gi|45361043|ref|NP_989158.1| myosin, light polypeptide
2, regulatory, cardiac, slow [Xenopus (Silurana)
tropicalis] gi|38494267|gb|AAH61602.1| Fast skeletal
myosin light chain 2 [Xenopus tropicalis]
gi|68342098|gb|AAY90073.1| MLC2 [Xenopus tropicalis]
gi|89272443|emb|CAJ83266.1| fast skeletal myosin light
chain 2 [Xenopus tropicalis] E=1e-68 s/c=1.81 id=86%
cov=100%
Length = 144
Score = 26.4 bits (57), Expect = 3.4
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 7 LFDWNQDGLIDREEFAFCWN 26
+ D N+DG+ID+E+ +
Sbjct: 15 VIDQNRDGIIDKEDLRDTFA 34
>d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId:
8010]}
Length = 107
Score = 25.7 bits (56), Expect = 3.6
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 8 FDWNQDGLIDREEFA 22
D + DG+I +EFA
Sbjct: 88 GDKDGDGMIGVDEFA 102
>d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens)
[TaxId: 9606]}
Length = 141
Score = 26.4 bits (57), Expect = 3.6
Identities = 7/22 (31%), Positives = 9/22 (40%)
Query: 7 LFDWNQDGLIDREEFAFCWNRW 28
LFD + G ID +E
Sbjct: 14 LFDADGTGTIDVKELKVAMRAL 35
>d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae
(Chlamydomonas reinhardtii) [TaxId: 3055]}
Length = 77
Score = 25.2 bits (55), Expect = 3.8
Identities = 7/14 (50%), Positives = 8/14 (57%)
Query: 8 FDWNQDGLIDREEF 21
D N D ID +EF
Sbjct: 54 ADRNDDNEIDEDEF 67
>d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId:
10117]}
Length = 109
Score = 25.7 bits (56), Expect = 3.8
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 8 FDWNQDGLIDREEFA 22
D + DG I EEF+
Sbjct: 89 GDKDGDGKIGVEEFS 103
>gi|147905802|ref|NP_001079458.1|(49-190:190) hypothetical protein
LOC379145 [Xenopus laevis] gi|27552841|gb|AAH42934.1|
MGC53335 protein [Xenopus laevis]
gi|148231599|ref|NP_001080252.1| myosin light chain,
alkali, fast skeletal muscle [Xenopus laevis]
gi|602988|gb|AAB00988.1| MLC1f/3f gene product
gi|27371205|gb|AAH41529.1| Myl1-prov protein [Xenopus
laevis] gi|45360563|ref|NP_988954.1| myosin, light
chain 1, alkali; skeletal, fast [Xenopus (Silurana)
tropicalis] gi|38174703|gb|AAH61302.1| Myosin, light
chain 1, alkali; skeletal, fast [Xenopus tropicalis]
gi|58476384|gb|AAH89727.1| Myosin, light chain 1,
alkali; skeletal, fast [Xenopus tropicalis]
gi|89272939|emb|CAJ83178.1| myosin, light polypeptide
1, alkali; skeletal, fast [Xenopus tropicalis]
gi|197246634|gb|AAI69133.1| Myl1 protein [Xenopus
tropicalis] E=2e-66 s/c=1.79 id=85% cov=99%
Length = 142
Score = 26.1 bits (56), Expect = 3.9
Identities = 6/24 (25%), Positives = 8/24 (33%)
Query: 7 LFDWNQDGLIDREEFAFCWNRWIK 30
LFD D I + A +
Sbjct: 9 LFDRTGDSKIALNQVADVMRALGQ 32
>d1snla_ a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 99
Score = 25.4 bits (55), Expect = 4.4
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 7 LFDWNQDGLIDREEF 21
L D N DG++D +E
Sbjct: 24 LHDINSDGVLDEQEL 38
>d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus
(Branchiostoma lanceolatum) [TaxId: 7740]}
Length = 68
Score = 24.8 bits (54), Expect = 4.5
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 7 LFDWNQDGLIDREEFAFCWNRW 28
+FD N DG+ID +EF F +
Sbjct: 10 VFDANGDGVIDFDEFKFIMQKV 31
Score = 24.4 bits (53), Expect = 5.4
Identities = 6/14 (42%), Positives = 9/14 (64%)
Query: 8 FDWNQDGLIDREEF 21
D + +G+ID EF
Sbjct: 48 ADEDGNGVIDIPEF 61
>d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 108
Score = 25.3 bits (55), Expect = 5.6
Identities = 6/15 (40%), Positives = 8/15 (53%)
Query: 8 FDWNQDGLIDREEFA 22
D + DG I +EF
Sbjct: 89 ADNDGDGKIGADEFQ 103
>d2nzug1 c.93.1.1 (G:58-332) Glucose-resistance amylase regulator
CcpA, C-terminal domain {Bacillus megaterium [TaxId:
1404]}
Length = 275
Score = 26.2 bits (56), Expect = 5.9
Identities = 22/188 (11%), Positives = 52/188 (27%), Gaps = 25/188 (13%)
Query: 38 ALLVINVQNDFVSGTLNMSQRSAKQNGLQVIEPINKLLDTVNFNAVFYSLDWHPSNHISF 97
+++ ++ N F + + A +I + D + +
Sbjct: 7 GVIIPDISNIFYAELARGIEDIATMYKYNII---------------LSNSDQNQDKELHL 51
Query: 98 IDNIKLRKI-------HYTSTVQPEDAQTYDTVVFDGDTPMKQKLWPRHCVQDSWGAELH 150
++N+ +++ + E+ + V + P + A
Sbjct: 52 LNNMLGKQVDGIIFMSGNVTEEHVEELKKSPVPVVLAASIESTNQIPSVTIDYEQAAFDA 111
Query: 151 KDLKIVDNAIKVYMGTDPEEDSYSVFWDSKKLKRTSLAKQLEAKKVTDVYVCGLAYDVCV 210
I + + E+ + K KR L V D Y+ Y
Sbjct: 112 VQSLIDSGHKNIAFVSGTLEEPINHAKKVKGYKRALTESGLP---VRDSYIVEGDYTYDS 168
Query: 211 GASAIDAI 218
G A++ +
Sbjct: 169 GIEAVEKL 176
>d1w7jb1 a.39.1.5 (B:11-149) Myosin Essential Chain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 139
Score = 25.3 bits (54), Expect = 6.9
Identities = 6/22 (27%), Positives = 7/22 (31%)
Query: 7 LFDWNQDGLIDREEFAFCWNRW 28
LFD DG I +
Sbjct: 8 LFDRVGDGKILYSQCGDVMRAL 29
>d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed
(Chenopodium album) [TaxId: 3559]}
Length = 81
Score = 24.5 bits (53), Expect = 7.0
Identities = 6/14 (42%), Positives = 8/14 (57%)
Query: 8 FDWNQDGLIDREEF 21
D + DG I +EF
Sbjct: 50 IDTDGDGFISFDEF 63
Score = 24.1 bits (52), Expect = 9.7
Identities = 8/25 (32%), Positives = 8/25 (32%)
Query: 7 LFDWNQDGLIDREEFAFCWNRWIKV 31
FD N DG I E V
Sbjct: 14 RFDTNGDGKISSSELGDALKTLGSV 38
>d1y1xa_ a.39.1.8 (A:) Programmed cell death 6 protein-like
protein {Leishmania major [TaxId: 5664]}
Length = 182
Score = 25.8 bits (55), Expect = 7.0
Identities = 4/22 (18%), Positives = 6/22 (27%)
Query: 7 LFDWNQDGLIDREEFAFCWNRW 28
D + G I E +
Sbjct: 26 AVDTDGSGAISVPELNAALSSA 47
>d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId:
8010]}
Length = 109
Score = 24.9 bits (54), Expect = 7.1
Identities = 6/15 (40%), Positives = 8/15 (53%)
Query: 8 FDWNQDGLIDREEFA 22
D + DG I +EF
Sbjct: 89 ADKDGDGKIGIDEFE 103
>d1iq3a_ a.39.1.6 (A:) Pob1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 110
Score = 25.0 bits (54), Expect = 7.1
Identities = 6/16 (37%), Positives = 8/16 (50%)
Query: 7 LFDWNQDGLIDREEFA 22
L D + DG + EF
Sbjct: 64 LSDADCDGALTLPEFC 79
>d1s6ca_ a.39.1.5 (A:) Kchip1, Kv4 potassium channel-interacting
protein {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 178
Score = 25.5 bits (55), Expect = 7.8
Identities = 6/14 (42%), Positives = 10/14 (71%)
Query: 8 FDWNQDGLIDREEF 21
D N+DG++ +EF
Sbjct: 144 MDKNKDGIVTLDEF 157
>d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId:
9031]}
Length = 81
Score = 24.6 bits (53), Expect = 7.8
Identities = 5/22 (22%), Positives = 8/22 (36%)
Query: 7 LFDWNQDGLIDREEFAFCWNRW 28
+FD + G I +E
Sbjct: 22 MFDADGGGDISTKELGTVMRML 43
>d1omra_ a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: 9913]}
Length = 201
Score = 25.6 bits (55), Expect = 8.0
Identities = 4/14 (28%), Positives = 6/14 (42%)
Query: 8 FDWNQDGLIDREEF 21
F D + +EF
Sbjct: 158 FGKKDDDKLTEKEF 171
>d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis
semifasciata) [TaxId: 30493]}
Length = 109
Score = 24.9 bits (54), Expect = 8.7
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 8 FDWNQDGLIDREEFA 22
D + DG I +EFA
Sbjct: 89 GDSDHDGKIGADEFA 103
>d1fpwa_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1)
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 190
Score = 25.5 bits (55), Expect = 8.9
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 8 FDWNQDGLIDREEF 21
D N+DG I +EF
Sbjct: 156 MDKNEDGYITLDEF 169
>d1jbaa_ a.39.1.5 (A:) Guanylate cyclase activating protein 2,
GCAP-2 {Cow (Bos taurus) [TaxId: 9913]}
Length = 189
Score = 25.2 bits (54), Expect = 9.3
Identities = 6/14 (42%), Positives = 7/14 (50%)
Query: 8 FDWNQDGLIDREEF 21
D N DG + EF
Sbjct: 156 VDENGDGQLSLNEF 169
>d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD
{Soybean (Glycine max) [TaxId: 3847]}
Length = 87
Score = 24.1 bits (52), Expect = 9.7
Identities = 5/22 (22%), Positives = 8/22 (36%)
Query: 7 LFDWNQDGLIDREEFAFCWNRW 28
+ D + G I +E R
Sbjct: 31 MIDTDNSGTITFDELKDGLKRV 52
>d1m45a_ a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 146
Score = 25.0 bits (53), Expect = 9.8
Identities = 5/15 (33%), Positives = 7/15 (46%)
Query: 7 LFDWNQDGLIDREEF 21
LFD G I ++
Sbjct: 10 LFDKKGQGAIAKDSL 24
>d1bjfa_ a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId: 9913]}
Length = 181
Score = 25.2 bits (54), Expect = 9.8
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 8 FDWNQDGLIDREEF 21
D N+DG + EEF
Sbjct: 152 MDTNRDGKLSLEEF 165
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.320 0.136 0.413
Gapped
Lambda K H
0.267 0.0576 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,316,169
Number of extensions: 60799
Number of successful extensions: 271
Number of sequences better than 10.0: 1
Number of HSP's gapped: 267
Number of HSP's successfully gapped: 77
Length of query: 340
Length of database: 2,407,596
Length adjustment: 86
Effective length of query: 254
Effective length of database: 1,226,816
Effective search space: 311611264
Effective search space used: 311611264
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (24.5 bits)