Query psy8943
Match_columns 134
No_of_seqs 176 out of 1142
Neff 7.4
Searched_HMMs 29240
Date Fri Aug 16 23:23:52 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8943.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/8943hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qvp_A Glucose oxidase; oxidor 99.8 3.4E-21 1.2E-25 163.1 8.3 92 2-93 214-307 (583)
2 3fim_B ARYL-alcohol oxidase; A 99.8 9.7E-22 3.3E-26 165.9 2.4 92 2-93 196-290 (566)
3 1gpe_A Protein (glucose oxidas 99.7 3.1E-18 1E-22 144.7 7.5 91 2-92 218-310 (587)
4 3q9t_A Choline dehydrogenase a 99.7 2.1E-17 7.1E-22 139.7 6.3 85 2-92 198-283 (577)
5 3t37_A Probable dehydrogenase; 99.7 1.2E-16 4E-21 131.6 7.2 86 2-92 198-284 (526)
6 2jbv_A Choline oxidase; alcoho 99.6 1.7E-16 5.9E-21 132.8 7.0 88 2-92 196-286 (546)
7 1coy_A Cholesterol oxidase; ox 99.6 3.5E-15 1.2E-19 123.8 6.4 85 3-91 217-306 (507)
8 1n4w_A CHOD, cholesterol oxida 99.5 8.8E-15 3E-19 121.2 6.5 84 3-90 212-300 (504)
9 1kdg_A CDH, cellobiose dehydro 99.5 1.3E-14 4.5E-19 120.8 5.4 86 3-92 185-274 (546)
10 1ju2_A HydroxynitrIle lyase; f 99.5 7.9E-14 2.7E-18 116.5 7.5 82 8-92 190-274 (536)
11 3pl8_A Pyranose 2-oxidase; sub 99.1 1.6E-10 5.3E-15 98.3 6.0 79 11-92 251-337 (623)
12 3qvp_A Glucose oxidase; oxidor 98.9 2.3E-10 7.9E-15 96.8 -0.5 46 87-132 100-146 (583)
13 3fim_B ARYL-alcohol oxidase; A 98.8 3E-10 1E-14 95.8 -0.6 45 88-132 85-130 (566)
14 3q9t_A Choline dehydrogenase a 98.7 4.5E-10 1.5E-14 94.9 -2.0 46 87-132 90-135 (577)
15 1gpe_A Protein (glucose oxidas 98.7 2.2E-09 7.6E-14 90.5 0.2 45 88-132 105-150 (587)
16 2jbv_A Choline oxidase; alcoho 98.4 1.8E-08 6.3E-13 84.1 -0.7 46 87-132 93-139 (546)
17 3t37_A Probable dehydrogenase; 98.3 3.4E-08 1.2E-12 81.0 -1.2 45 88-132 98-143 (526)
18 1n4w_A CHOD, cholesterol oxida 97.8 1.5E-06 5E-11 71.8 -1.6 42 87-132 107-149 (504)
19 1coy_A Cholesterol oxidase; ox 97.7 3.2E-06 1.1E-10 69.8 -1.2 41 88-132 113-154 (507)
20 4at0_A 3-ketosteroid-delta4-5a 97.6 0.00013 4.5E-09 59.9 7.4 53 25-80 213-265 (510)
21 1ju2_A HydroxynitrIle lyase; f 96.7 0.00027 9.1E-09 58.8 -0.1 40 88-131 104-143 (536)
22 1y0p_A Fumarate reductase flav 96.3 0.011 3.8E-07 49.0 7.4 52 25-80 266-318 (571)
23 1qo8_A Flavocytochrome C3 fuma 96.2 0.012 4E-07 48.9 7.2 53 25-81 261-314 (566)
24 1kdg_A CDH, cellobiose dehydro 96.1 0.00078 2.7E-08 55.7 -0.4 38 88-131 94-134 (546)
25 1d4d_A Flavocytochrome C fumar 96.0 0.017 5.7E-07 48.2 7.3 52 25-80 266-318 (572)
26 2h88_A Succinate dehydrogenase 95.8 0.031 1.1E-06 47.4 8.2 51 25-80 166-218 (621)
27 1chu_A Protein (L-aspartate ox 95.5 0.039 1.3E-06 45.8 7.3 54 26-80 151-209 (540)
28 2wdq_A Succinate dehydrogenase 95.4 0.038 1.3E-06 46.3 7.2 51 26-80 155-207 (588)
29 1kf6_A Fumarate reductase flav 95.4 0.055 1.9E-06 45.5 8.0 52 25-81 146-199 (602)
30 3da1_A Glycerol-3-phosphate de 95.1 0.043 1.5E-06 45.7 6.5 60 25-90 181-242 (561)
31 2rgh_A Alpha-glycerophosphate 95.0 0.037 1.3E-06 46.2 5.7 58 25-88 199-258 (571)
32 4dgk_A Phytoene dehydrogenase; 94.8 0.027 9.3E-07 45.2 4.5 53 25-85 232-284 (501)
33 2bs2_A Quinol-fumarate reducta 94.8 0.038 1.3E-06 47.1 5.5 49 26-79 170-220 (660)
34 3cgv_A Geranylgeranyl reductas 94.0 0.14 4.7E-06 39.5 6.7 49 25-78 113-161 (397)
35 3dje_A Fructosyl amine: oxygen 93.6 0.073 2.5E-06 42.0 4.4 52 25-85 172-226 (438)
36 3gyx_A Adenylylsulfate reducta 93.5 0.076 2.6E-06 45.4 4.6 50 28-79 182-233 (662)
37 3dme_A Conserved exported prot 93.5 0.078 2.7E-06 40.2 4.3 59 25-90 161-220 (369)
38 1jnr_A Adenylylsulfate reducta 93.4 0.16 5.5E-06 42.9 6.5 51 28-80 166-219 (643)
39 3itj_A Thioredoxin reductase 1 93.4 0.53 1.8E-05 35.1 8.8 59 23-86 218-278 (338)
40 3e1t_A Halogenase; flavoprotei 93.3 0.22 7.5E-06 40.6 7.1 51 25-80 122-173 (512)
41 1rp0_A ARA6, thiazole biosynth 93.3 0.33 1.1E-05 36.4 7.5 50 24-78 130-190 (284)
42 3f8d_A Thioredoxin reductase ( 93.0 0.5 1.7E-05 34.9 8.1 66 19-90 195-262 (323)
43 3ka7_A Oxidoreductase; structu 93.0 0.1 3.6E-06 40.7 4.5 52 25-85 207-258 (425)
44 3atr_A Conserved archaeal prot 92.9 0.37 1.3E-05 38.4 7.7 50 26-80 112-163 (453)
45 3cty_A Thioredoxin reductase; 92.6 0.38 1.3E-05 36.0 7.1 60 26-90 202-263 (319)
46 1fl2_A Alkyl hydroperoxide red 91.6 1.1 3.7E-05 33.2 8.4 55 26-85 192-248 (310)
47 3r9u_A Thioredoxin reductase; 91.5 0.79 2.7E-05 33.7 7.6 63 19-86 188-251 (315)
48 1y56_B Sarcosine oxidase; dehy 91.3 0.16 5.3E-06 39.1 3.6 56 25-90 160-215 (382)
49 2q7v_A Thioredoxin reductase; 91.0 1.2 4.3E-05 33.2 8.3 57 23-85 197-255 (325)
50 2q0l_A TRXR, thioredoxin reduc 90.9 1.5 5.2E-05 32.4 8.7 61 23-88 188-250 (311)
51 1trb_A Thioredoxin reductase; 90.7 0.98 3.4E-05 33.5 7.5 56 25-85 195-253 (320)
52 2i0z_A NAD(FAD)-utilizing dehy 90.7 0.36 1.2E-05 38.6 5.2 50 25-82 145-194 (447)
53 3axb_A Putative oxidoreductase 90.5 0.22 7.5E-06 39.4 3.8 59 25-89 192-263 (448)
54 3ab1_A Ferredoxin--NADP reduct 90.2 1.2 4E-05 33.9 7.6 61 25-90 213-274 (360)
55 3i3l_A Alkylhalidase CMLS; fla 89.9 0.62 2.1E-05 39.1 6.2 53 20-77 134-186 (591)
56 2qcu_A Aerobic glycerol-3-phos 89.7 0.63 2.2E-05 37.7 6.0 54 25-85 160-215 (501)
57 3oz2_A Digeranylgeranylglycero 89.1 1.1 3.9E-05 33.8 6.8 54 19-77 107-160 (397)
58 1vdc_A NTR, NADPH dependent th 88.9 2.8 9.6E-05 31.2 8.8 63 23-89 204-268 (333)
59 2gmh_A Electron transfer flavo 87.6 0.83 2.8E-05 38.0 5.5 52 25-80 155-218 (584)
60 1mo9_A ORF3; nucleotide bindin 87.6 1.7 5.9E-05 35.4 7.3 64 22-90 263-328 (523)
61 3lxd_A FAD-dependent pyridine 87.5 1.1 3.6E-05 35.2 5.8 63 20-90 200-262 (415)
62 2zbw_A Thioredoxin reductase; 87.2 2.8 9.6E-05 31.2 7.9 62 23-90 200-263 (335)
63 3fg2_P Putative rubredoxin red 87.2 1 3.4E-05 35.3 5.5 61 22-90 192-252 (404)
64 2gag_B Heterotetrameric sarcos 87.1 0.76 2.6E-05 35.3 4.7 55 25-89 185-239 (405)
65 3ps9_A TRNA 5-methylaminomethy 86.5 0.9 3.1E-05 38.2 5.1 54 25-88 428-481 (676)
66 1hyu_A AHPF, alkyl hydroperoxi 86.4 3.3 0.00011 33.8 8.4 54 27-85 404-459 (521)
67 2oln_A NIKD protein; flavoprot 85.9 1.2 4E-05 34.4 5.2 53 25-88 164-216 (397)
68 4a9w_A Monooxygenase; baeyer-v 85.5 1.4 4.7E-05 32.9 5.3 64 18-90 80-143 (357)
69 2gf3_A MSOX, monomeric sarcosi 85.4 2.1 7.2E-05 32.6 6.4 53 25-88 161-213 (389)
70 3lzw_A Ferredoxin--NADP reduct 85.3 2.8 9.4E-05 31.0 6.9 61 25-91 200-262 (332)
71 3nix_A Flavoprotein/dehydrogen 84.9 2 6.9E-05 33.2 6.1 47 26-78 118-165 (421)
72 2gjc_A Thiazole biosynthetic e 84.7 4.1 0.00014 31.8 7.8 56 23-78 156-238 (326)
73 3nrn_A Uncharacterized protein 84.4 0.83 2.8E-05 35.7 3.7 50 25-85 200-249 (421)
74 3pvc_A TRNA 5-methylaminomethy 84.2 1.2 4E-05 37.7 4.8 54 25-87 423-476 (689)
75 3jsk_A Cypbp37 protein; octame 83.6 3.7 0.00013 32.3 7.1 57 23-80 170-252 (344)
76 1ryi_A Glycine oxidase; flavop 83.5 0.77 2.6E-05 35.1 3.1 53 25-88 175-227 (382)
77 3v76_A Flavoprotein; structura 83.1 2.2 7.4E-05 34.0 5.7 48 25-82 143-190 (417)
78 2cul_A Glucose-inhibited divis 82.9 2.1 7.2E-05 30.8 5.2 49 26-83 81-129 (232)
79 3nyc_A D-arginine dehydrogenas 82.3 1.5 5E-05 33.3 4.3 54 25-89 165-218 (381)
80 2xve_A Flavin-containing monoo 81.9 4.4 0.00015 32.4 7.2 59 28-90 115-177 (464)
81 2e5v_A L-aspartate oxidase; ar 81.4 1 3.4E-05 36.4 3.2 47 25-79 130-176 (472)
82 2uzz_A N-methyl-L-tryptophan o 81.2 3.2 0.00011 31.4 5.8 48 25-84 160-208 (372)
83 2zxi_A TRNA uridine 5-carboxym 81.1 2.1 7.2E-05 36.5 5.1 49 26-83 136-184 (637)
84 1pj5_A N,N-dimethylglycine oxi 80.8 1.4 4.8E-05 38.0 4.0 55 25-89 162-216 (830)
85 3s5w_A L-ornithine 5-monooxyge 80.3 7.9 0.00027 30.4 8.1 48 27-80 329-378 (463)
86 3ces_A MNMG, tRNA uridine 5-ca 79.7 3.5 0.00012 35.2 6.1 48 27-83 138-185 (651)
87 3p1w_A Rabgdi protein; GDI RAB 78.7 2.1 7E-05 35.1 4.2 47 25-78 267-313 (475)
88 3nlc_A Uncharacterized protein 78.0 2.5 8.7E-05 35.2 4.6 58 25-90 231-290 (549)
89 2a87_A TRXR, TR, thioredoxin r 77.4 3.9 0.00013 30.6 5.2 56 24-85 201-258 (335)
90 1v59_A Dihydrolipoamide dehydr 76.0 10 0.00035 30.0 7.6 64 22-89 232-299 (478)
91 3iwa_A FAD-dependent pyridine 76.0 8.3 0.00028 30.6 7.0 60 22-90 210-269 (472)
92 2gqf_A Hypothetical protein HI 75.2 4.4 0.00015 31.9 5.1 52 25-82 120-171 (401)
93 3s5w_A L-ornithine 5-monooxyge 75.1 4.9 0.00017 31.6 5.4 56 19-77 132-190 (463)
94 1ebd_A E3BD, dihydrolipoamide 74.5 12 0.0004 29.6 7.5 54 24-83 221-274 (455)
95 1k0i_A P-hydroxybenzoate hydro 73.5 8.8 0.0003 29.3 6.4 51 26-81 115-165 (394)
96 3ef6_A Toluene 1,2-dioxygenase 72.4 2.8 9.7E-05 32.8 3.4 59 23-90 194-252 (410)
97 2gv8_A Monooxygenase; FMO, FAD 72.0 8 0.00028 30.4 6.0 56 28-89 129-187 (447)
98 2eq6_A Pyruvate dehydrogenase 71.6 9.8 0.00034 30.2 6.5 55 23-83 219-275 (464)
99 1q1r_A Putidaredoxin reductase 71.1 4.4 0.00015 32.0 4.2 61 24-90 201-261 (431)
100 3cp8_A TRNA uridine 5-carboxym 70.8 11 0.00039 32.0 6.9 46 26-80 130-175 (641)
101 3gwf_A Cyclohexanone monooxyge 70.3 7.8 0.00027 31.8 5.7 66 18-90 91-158 (540)
102 4dna_A Probable glutathione re 69.8 8.8 0.0003 30.4 5.8 60 23-90 220-281 (463)
103 3ihg_A RDME; flavoenzyme, anth 69.7 16 0.00055 29.4 7.4 49 26-78 132-182 (535)
104 3ic9_A Dihydrolipoamide dehydr 69.5 21 0.00072 28.6 8.1 59 25-90 226-287 (492)
105 3dgh_A TRXR-1, thioredoxin red 68.8 14 0.00047 29.4 6.8 57 23-84 236-294 (483)
106 2qae_A Lipoamide, dihydrolipoy 68.8 11 0.00038 29.8 6.1 59 20-84 221-281 (468)
107 2a8x_A Dihydrolipoyl dehydroge 68.4 9.2 0.00032 30.3 5.6 54 24-83 222-275 (464)
108 3cgb_A Pyridine nucleotide-dis 68.2 15 0.00051 29.3 6.9 57 24-90 237-293 (480)
109 2qa1_A PGAE, polyketide oxygen 68.2 16 0.00056 29.4 7.1 47 26-78 118-164 (500)
110 3lad_A Dihydrolipoamide dehydr 67.9 18 0.0006 28.6 7.2 55 23-83 230-284 (476)
111 2v3a_A Rubredoxin reductase; a 67.1 10 0.00034 29.2 5.5 62 20-90 193-254 (384)
112 4ap3_A Steroid monooxygenase; 67.0 9.2 0.00031 31.5 5.5 66 18-90 103-170 (549)
113 2x3n_A Probable FAD-dependent 66.8 11 0.00038 28.8 5.6 44 27-78 121-165 (399)
114 2hqm_A GR, grase, glutathione 65.7 9.3 0.00032 30.5 5.1 61 24-90 236-297 (479)
115 2jae_A L-amino acid oxidase; o 65.7 14 0.00049 29.1 6.3 44 29-78 252-295 (489)
116 3oc4_A Oxidoreductase, pyridin 65.5 19 0.00064 28.4 6.9 53 22-84 197-249 (452)
117 1yvv_A Amine oxidase, flavin-c 65.4 7.2 0.00025 28.9 4.2 48 28-84 119-167 (336)
118 2weu_A Tryptophan 5-halogenase 65.3 9.7 0.00033 30.5 5.2 46 25-78 184-229 (511)
119 1dxl_A Dihydrolipoamide dehydr 65.2 9.9 0.00034 30.0 5.2 56 23-84 227-284 (470)
120 3dgz_A Thioredoxin reductase 2 65.0 25 0.00087 27.9 7.6 57 23-84 234-292 (488)
121 3c4n_A Uncharacterized protein 64.7 3.2 0.00011 32.4 2.2 50 25-85 183-241 (405)
122 2qa2_A CABE, polyketide oxygen 64.7 18 0.00061 29.2 6.7 46 26-78 119-165 (499)
123 1m6i_A Programmed cell death p 64.6 14 0.00049 29.6 6.1 59 23-90 235-293 (493)
124 3hyw_A Sulfide-quinone reducta 64.5 12 0.00041 29.4 5.5 59 19-88 205-264 (430)
125 1zmd_A Dihydrolipoyl dehydroge 64.2 16 0.00054 29.0 6.2 57 22-83 228-286 (474)
126 3urh_A Dihydrolipoyl dehydroge 63.9 18 0.00061 28.9 6.5 55 23-83 248-304 (491)
127 2cdu_A NADPH oxidase; flavoenz 62.2 12 0.00042 29.4 5.2 54 23-85 200-253 (452)
128 2ywl_A Thioredoxin reductase r 62.2 8.5 0.00029 26.0 3.8 58 20-90 62-119 (180)
129 2bcg_G Secretory pathway GDP d 61.9 8.7 0.0003 30.5 4.3 46 26-78 254-299 (453)
130 4b63_A L-ornithine N5 monooxyg 61.8 21 0.00071 28.8 6.6 59 18-77 149-212 (501)
131 3d1c_A Flavin-containing putat 61.4 13 0.00043 27.9 5.0 53 20-82 94-146 (369)
132 1d5t_A Guanine nucleotide diss 61.0 7.2 0.00025 30.8 3.6 43 27-78 247-289 (433)
133 2gag_A Heterotetrameric sarcos 60.8 15 0.0005 32.5 5.9 61 25-89 327-393 (965)
134 2dkh_A 3-hydroxybenzoate hydro 60.2 18 0.00061 30.2 6.1 54 25-80 153-212 (639)
135 2pyx_A Tryptophan halogenase; 59.9 13 0.00046 29.9 5.1 44 27-78 189-232 (526)
136 3ics_A Coenzyme A-disulfide re 59.6 14 0.00047 30.3 5.2 55 25-89 104-160 (588)
137 2e4g_A Tryptophan halogenase; 59.2 13 0.00043 30.4 4.9 44 27-78 208-251 (550)
138 3ntd_A FAD-dependent pyridine 58.3 8.7 0.0003 31.1 3.8 53 26-88 70-124 (565)
139 3dk9_A Grase, GR, glutathione 58.1 35 0.0012 26.9 7.3 64 23-90 237-306 (478)
140 2bry_A NEDD9 interacting prote 58.1 3.2 0.00011 33.6 1.1 55 25-82 177-233 (497)
141 2vvm_A Monoamine oxidase N; FA 56.8 27 0.00091 27.5 6.4 47 28-83 270-316 (495)
142 1fec_A Trypanothione reductase 54.8 22 0.00074 28.5 5.5 60 23-90 240-301 (490)
143 3lzw_A Ferredoxin--NADP reduct 54.5 30 0.001 25.2 5.9 63 18-89 71-134 (332)
144 2aqj_A Tryptophan halogenase, 53.1 16 0.00054 29.6 4.5 46 25-78 176-221 (538)
145 1w4x_A Phenylacetone monooxyge 52.5 31 0.001 28.0 6.2 55 29-90 111-165 (542)
146 3iwa_A FAD-dependent pyridine 52.3 20 0.00069 28.3 4.9 50 26-85 78-129 (472)
147 2wpf_A Trypanothione reductase 51.7 26 0.00091 28.1 5.6 58 24-89 245-304 (495)
148 1vg0_A RAB proteins geranylger 51.6 20 0.00067 30.6 4.9 47 24-76 388-434 (650)
149 3fmw_A Oxygenase; mithramycin, 51.5 18 0.0006 29.9 4.6 47 26-78 160-206 (570)
150 3l8k_A Dihydrolipoyl dehydroge 51.1 22 0.00074 28.2 4.9 57 29-90 226-284 (466)
151 3uox_A Otemo; baeyer-villiger 51.1 19 0.00066 29.5 4.8 54 30-90 105-158 (545)
152 3k7m_X 6-hydroxy-L-nicotine ox 51.0 24 0.0008 27.2 5.0 44 24-77 214-257 (431)
153 3qj4_A Renalase; FAD/NAD(P)-bi 51.0 19 0.00065 26.9 4.4 48 28-84 123-170 (342)
154 3o0h_A Glutathione reductase; 49.5 17 0.00059 28.9 4.1 51 24-83 242-292 (484)
155 3oc4_A Oxidoreductase, pyridin 49.3 59 0.002 25.4 7.2 55 25-89 69-123 (452)
156 1ps9_A 2,4-dienoyl-COA reducta 49.2 33 0.0011 28.6 6.0 51 24-84 583-633 (671)
157 1xdi_A RV3303C-LPDA; reductase 48.7 35 0.0012 27.2 5.8 58 23-89 232-291 (499)
158 3k30_A Histamine dehydrogenase 48.1 32 0.0011 28.9 5.8 55 24-86 577-631 (690)
159 3nks_A Protoporphyrinogen oxid 48.0 6.1 0.00021 31.0 1.2 50 26-84 246-295 (477)
160 4eqs_A Coenzyme A disulfide re 47.0 35 0.0012 26.8 5.6 51 26-84 69-119 (437)
161 2bc0_A NADH oxidase; flavoprot 46.9 30 0.001 27.5 5.2 53 22-84 244-296 (490)
162 2r0c_A REBC; flavin adenine di 46.5 58 0.002 26.4 6.9 43 31-79 152-196 (549)
163 1gte_A Dihydropyrimidine dehyd 46.2 45 0.0015 29.6 6.6 59 26-89 382-454 (1025)
164 2gqw_A Ferredoxin reductase; f 46.1 21 0.0007 27.8 4.0 54 24-90 197-250 (408)
165 3h28_A Sulfide-quinone reducta 45.9 29 0.00098 27.0 4.8 52 19-80 205-257 (430)
166 1nhp_A NADH peroxidase; oxidor 45.0 39 0.0013 26.4 5.5 53 22-84 199-251 (447)
167 2yg5_A Putrescine oxidase; oxi 44.7 32 0.0011 26.6 5.0 47 28-83 226-272 (453)
168 3ntd_A FAD-dependent pyridine 44.4 41 0.0014 27.0 5.7 63 23-90 201-278 (565)
169 3kd9_A Coenzyme A disulfide re 44.2 36 0.0012 26.7 5.2 43 25-77 70-112 (449)
170 1ojt_A Surface protein; redox- 43.9 31 0.0011 27.4 4.8 60 22-89 234-298 (482)
171 2ivd_A PPO, PPOX, protoporphyr 43.4 27 0.00094 27.2 4.4 50 29-84 250-299 (478)
172 2zbw_A Thioredoxin reductase; 43.3 48 0.0016 24.3 5.5 54 25-88 76-131 (335)
173 1y56_A Hypothetical protein PH 43.1 21 0.00072 28.6 3.7 56 26-90 269-324 (493)
174 3h8l_A NADH oxidase; membrane 42.4 50 0.0017 25.3 5.7 50 24-84 66-116 (409)
175 3qfa_A Thioredoxin reductase 1 42.1 74 0.0025 25.6 6.9 58 24-83 260-319 (519)
176 1onf_A GR, grase, glutathione 42.1 51 0.0017 26.3 5.8 61 23-90 226-288 (500)
177 3ab1_A Ferredoxin--NADP reduct 41.7 55 0.0019 24.3 5.7 57 24-88 84-141 (360)
178 3itj_A Thioredoxin reductase 1 40.8 15 0.0005 27.0 2.3 53 19-78 89-141 (338)
179 1cjc_A Protein (adrenodoxin re 39.9 77 0.0026 25.2 6.6 51 27-81 270-335 (460)
180 3uox_A Otemo; baeyer-villiger 39.5 43 0.0015 27.4 5.1 47 17-78 342-390 (545)
181 1ges_A Glutathione reductase; 39.5 33 0.0011 27.0 4.3 58 24-89 218-277 (450)
182 2vdc_G Glutamate synthase [NAD 38.5 17 0.00057 29.2 2.4 47 26-78 314-377 (456)
183 2b9w_A Putative aminooxidase; 38.2 28 0.00095 26.7 3.6 46 29-84 218-263 (424)
184 3klj_A NAD(FAD)-dependent dehy 38.1 29 0.00097 26.9 3.7 52 25-89 73-124 (385)
185 1xhc_A NADH oxidase /nitrite r 37.7 28 0.00096 26.7 3.5 57 20-90 189-245 (367)
186 1zk7_A HGII, reductase, mercur 37.2 51 0.0017 25.9 5.1 50 24-83 226-275 (467)
187 2yqu_A 2-oxoglutarate dehydrog 37.1 63 0.0022 25.2 5.6 50 25-83 219-268 (455)
188 1lqt_A FPRA; NADP+ derivative, 36.9 57 0.0019 25.9 5.4 49 27-81 265-328 (456)
189 3ics_A Coenzyme A-disulfide re 36.2 46 0.0016 27.0 4.8 57 23-90 237-293 (588)
190 2r9z_A Glutathione amide reduc 35.8 66 0.0023 25.3 5.5 51 24-82 217-267 (463)
191 3c96_A Flavin-containing monoo 34.1 85 0.0029 23.9 5.8 48 27-81 122-171 (410)
192 3gwf_A Cyclohexanone monooxyge 33.8 44 0.0015 27.3 4.3 47 17-77 334-382 (540)
193 2z3y_A Lysine-specific histone 33.4 1.3E+02 0.0044 25.1 7.2 43 28-76 410-455 (662)
194 3lov_A Protoporphyrinogen oxid 32.8 24 0.00081 27.7 2.4 45 29-84 249-294 (475)
195 2bc0_A NADH oxidase; flavoprot 32.6 1E+02 0.0035 24.4 6.2 54 26-89 104-157 (490)
196 3kd9_A Coenzyme A disulfide re 32.0 98 0.0033 24.1 5.9 57 23-90 199-255 (449)
197 3i6d_A Protoporphyrinogen oxid 31.0 49 0.0017 25.5 3.9 47 29-84 248-294 (470)
198 4g6h_A Rotenone-insensitive NA 30.6 36 0.0012 27.5 3.2 51 24-81 282-334 (502)
199 1b37_A Protein (polyamine oxid 30.3 54 0.0018 25.7 4.1 41 28-77 228-268 (472)
200 1sez_A Protoporphyrinogen oxid 29.8 19 0.00064 28.5 1.4 55 29-84 256-313 (504)
201 1s3e_A Amine oxidase [flavin-c 29.3 54 0.0019 26.0 4.0 47 28-83 226-272 (520)
202 3cgb_A Pyridine nucleotide-dis 28.9 95 0.0032 24.5 5.4 55 25-89 104-160 (480)
203 3l8k_A Dihydrolipoyl dehydroge 28.7 1.7E+02 0.0058 22.9 6.8 49 23-84 98-147 (466)
204 3sx6_A Sulfide-quinone reducta 28.3 1.1E+02 0.0037 23.7 5.6 61 19-89 213-279 (437)
205 1nhp_A NADH peroxidase; oxidor 27.7 1E+02 0.0035 23.9 5.3 49 26-84 68-118 (447)
206 2iid_A L-amino-acid oxidase; f 27.7 72 0.0025 25.0 4.5 43 30-78 254-297 (498)
207 2x8g_A Thioredoxin glutathione 27.2 2.1E+02 0.007 23.2 7.3 59 24-84 336-400 (598)
208 4ap3_A Steroid monooxygenase; 26.7 1E+02 0.0035 25.1 5.4 47 17-78 347-395 (549)
209 2xag_A Lysine-specific histone 25.1 1.6E+02 0.0056 25.7 6.5 43 28-76 581-626 (852)
210 1y56_A Hypothetical protein PH 25.0 1E+02 0.0035 24.5 5.0 48 26-79 172-219 (493)
211 2vou_A 2,6-dihydroxypyridine h 24.7 86 0.0029 23.8 4.3 43 27-78 110-152 (397)
212 3rp8_A Flavoprotein monooxygen 24.2 1.3E+02 0.0044 22.8 5.3 44 29-82 140-184 (407)
213 1w4x_A Phenylacetone monooxyge 24.0 76 0.0026 25.6 4.1 47 18-79 343-391 (542)
214 1lvl_A Dihydrolipoamide dehydr 23.6 62 0.0021 25.4 3.4 57 24-90 222-281 (458)
215 3alj_A 2-methyl-3-hydroxypyrid 23.5 90 0.0031 23.5 4.2 43 25-79 118-160 (379)
216 2gag_A Heterotetrameric sarcos 22.5 2E+02 0.0068 25.3 6.6 47 26-78 194-252 (965)
217 4eqs_A Coenzyme A disulfide re 20.8 1.7E+02 0.0058 22.8 5.4 56 23-91 197-252 (437)
218 2cdu_A NADPH oxidase; flavoenz 20.2 1.6E+02 0.0056 22.8 5.2 54 25-88 69-124 (452)
No 1
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=99.84 E-value=3.4e-21 Score=163.09 Aligned_cols=92 Identities=28% Similarity=0.442 Sum_probs=81.7
Q ss_pred ccccccc-CCeeechhhhhhhhhhcCCCeEEEccceEEEEEeccCCCCCeEEEEEEE-eCCeEEEEEeceEEEecCCccc
Q psy8943 2 IAQGTIR-RGSRCSTSKAFLRPIRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEIL-RDGRKHIIRAKKEIISSAGAIN 79 (134)
Q Consensus 2 ~~~~~~~-~g~R~sa~~~~l~~~~~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~-~~g~~~~~~a~~~vIlaaGai~ 79 (134)
+++.+++ +|.|++++.+||.|++.++||+|++++.|+||+++..+.+++|+||++. .+|..++++|+||||||||+++
T Consensus 214 ~~~~t~~~~g~R~saa~ayL~p~~~r~NL~V~t~a~V~rIl~d~~~~~~ra~GV~~~~~~G~~~~v~A~kEVILsAGa~~ 293 (583)
T 3qvp_A 214 MFPNTLHEDQVRSDAAREWLLPNYQRPNLQVLTGQYVGKVLLSQNGTTPRAVGVEFGTHKGNTHNVYAKHEVLLAAGSAV 293 (583)
T ss_dssp CCCBSBCTTCBBCCHHHHHTTTTTTCTTEEEECSCEEEEEEEECSSSSCEEEEEEEESSTTCEEEEEEEEEEEECSCTTT
T ss_pred ccceeEcCCCcEecHHHHHHHHhhcCCCcEEEcCCEEEEEEeccCCCCCEEEEEEEEecCCcEEEEEECCEEEEeCCccC
Confidence 4567775 7899999999999988899999999999999999853334699999998 4888899999999999999999
Q ss_pred CCchhhhccccccc
Q psy8943 80 SPQLLMVSGGSSVL 93 (134)
Q Consensus 80 tP~lLl~SGig~~~ 93 (134)
||||||+||||+..
T Consensus 294 SPqLL~lSGIGp~~ 307 (583)
T 3qvp_A 294 SPTILEYSGIGMKS 307 (583)
T ss_dssp HHHHHHHTTBSCHH
T ss_pred CHHHHHHcCCCCHH
Confidence 99999999999873
No 2
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=99.83 E-value=9.7e-22 Score=165.86 Aligned_cols=92 Identities=30% Similarity=0.448 Sum_probs=81.0
Q ss_pred cccccccCCeeechhhhhhhhhhcCCCeEEEccceEEEEEeccCCCC-CeEEEEEEEeC-C-eEEEEEeceEEEecCCcc
Q psy8943 2 IAQGTIRRGSRCSTSKAFLRPIRLRKNLHIAMETQALRLLFDKSGPV-PKAVGIEILRD-G-RKHIIRAKKEIISSAGAI 78 (134)
Q Consensus 2 ~~~~~~~~g~R~sa~~~~l~~~~~~~nl~i~t~~~V~ri~~~~~~~~-~~a~gV~~~~~-g-~~~~~~a~~~vIlaaGai 78 (134)
+++.++++|.|++++.+||.|+..++||+|++++.|+||+++...++ ++|+||+|.+. | +.++++|+||||||||+|
T Consensus 196 ~~~~~~~~g~R~sa~~ayL~p~~~r~NL~Vlt~a~V~rIl~~~~~~g~~rA~GVe~~~~~g~~~~~v~A~kEVILsAGai 275 (566)
T 3fim_B 196 WSIASVGNGQRSSSSTAYLRPAQSRPNLSVLINAQVTKLVNSGTTNGLPAFRCVEYAEQEGAPTTTVCAKKEVVLSAGSV 275 (566)
T ss_dssp ECCBSEETTEECCHHHHTHHHHTTCTTEEEESSCEEEEEECCEEETTEEECCEEEEESSTTSCCEEEEEEEEEEECCHHH
T ss_pred eeeeecCCCEEcCHHHHHhhhhccCCCeEEECCCEEEEEEeecCCCCCCEEEEEEEEECCCceEEEEEeeeEEEEecCCc
Confidence 46778889999999999999988899999999999999999821112 58999999974 5 778999999999999999
Q ss_pred cCCchhhhccccccc
Q psy8943 79 NSPQLLMVSGGSSVL 93 (134)
Q Consensus 79 ~tP~lLl~SGig~~~ 93 (134)
+||||||+||||+..
T Consensus 276 ~SPqlL~lSGIGp~~ 290 (566)
T 3fim_B 276 GTPILLQLSGIGDEN 290 (566)
T ss_dssp HHHHHHHHTTEECHH
T ss_pred CChHHHHhcCCCChH
Confidence 999999999999874
No 3
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=99.73 E-value=3.1e-18 Score=144.69 Aligned_cols=91 Identities=26% Similarity=0.364 Sum_probs=79.1
Q ss_pred ccccccc-CCeeechhhhhhhhhhcCCCeEEEccceEEEEEeccCCCCCeEEEEEEE-eCCeEEEEEeceEEEecCCccc
Q psy8943 2 IAQGTIR-RGSRCSTSKAFLRPIRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEIL-RDGRKHIIRAKKEIISSAGAIN 79 (134)
Q Consensus 2 ~~~~~~~-~g~R~sa~~~~l~~~~~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~-~~g~~~~~~a~~~vIlaaGai~ 79 (134)
+++.++. +|.|+|++.+||.+++.++|++|++++.|++|+++..+.+++|+||++. .+|..+.++|+++||||||+++
T Consensus 218 ~~~~~~~~~g~R~sa~~~~l~~~~~~~nl~i~~~~~v~~l~~~~~~~~~~~~GV~~~~~~g~~~~v~A~k~VILaaG~~~ 297 (587)
T 1gpe_A 218 MIMNNLDENQVRVDAARAWLLPNYQRSNLEILTGQMVGKVLFKQTASGPQAVGVNFGTNKAVNFDVFAKHEVLLAAGSAI 297 (587)
T ss_dssp CCEESBCTTCCBCCHHHHHTTTTTTCTTEEEEESCEEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEEECSCTTT
T ss_pred ecceEECCCCcccCHHHHHHHHhhcCCCcEEEcCCEEEEEEECCCCCCCEEEEEEEEeCCCcEEEEEecccEEEccCCCC
Confidence 3556664 7899999999998887889999999999999999842112489999998 5888889999899999999999
Q ss_pred CCchhhhcccccc
Q psy8943 80 SPQLLMVSGGSSV 92 (134)
Q Consensus 80 tP~lLl~SGig~~ 92 (134)
||+|||+||||+.
T Consensus 298 sp~lL~~SGIGp~ 310 (587)
T 1gpe_A 298 SPLILEYSGIGLK 310 (587)
T ss_dssp HHHHHHHTTEECH
T ss_pred CHHHHHhCCCCCH
Confidence 9999999999995
No 4
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=99.69 E-value=2.1e-17 Score=139.73 Aligned_cols=85 Identities=28% Similarity=0.468 Sum_probs=73.7
Q ss_pred cccccccCCeeechhhhhhhhhhcCCCeEEEccceEEEEEeccCCCCCeEEEEEEEeC-CeEEEEEeceEEEecCCcccC
Q psy8943 2 IAQGTIRRGSRCSTSKAFLRPIRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRD-GRKHIIRAKKEIISSAGAINS 80 (134)
Q Consensus 2 ~~~~~~~~g~R~sa~~~~l~~~~~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~-g~~~~~~a~~~vIlaaGai~t 80 (134)
+++.++++|.|+++. .|+ ..++||+|++++.|+||+++.. +++|+||++.+. |..++++|+||||||||+++|
T Consensus 198 ~~~~~~~~g~R~s~~-~~l---~~r~Nl~v~~~a~v~ri~~~~~--~~~a~GV~~~~~~g~~~~v~A~keVILsaGa~~s 271 (577)
T 3q9t_A 198 HCCDTIYRGQRSGSF-LFV---KNKPNITIVPEVHSKRLIINEA--DRTCKGVTVVTAAGNELNFFADREVILSQGVFET 271 (577)
T ss_dssp ECEESEETTEECCGG-GGS---SSCTTEEEECSEEEEEEEEETT--TTEEEEEEEEETTSCEEEEEEEEEEEECSHHHHH
T ss_pred eecceecCCeEeeHH-HHH---hcCCCeEEEcCcEEEEEEEeCC--CCEEEEEEEEeCCCcEEEEEeeeEEEEcccccCC
Confidence 456788889998765 453 5689999999999999999842 459999999984 888899999999999999999
Q ss_pred Cchhhhcccccc
Q psy8943 81 PQLLMVSGGSSV 92 (134)
Q Consensus 81 P~lLl~SGig~~ 92 (134)
|+|||+||||++
T Consensus 272 p~lL~~SGIGp~ 283 (577)
T 3q9t_A 272 PKLLMLSGIGPT 283 (577)
T ss_dssp HHHHHHTTEECH
T ss_pred hHHHHHcCCCCH
Confidence 999999999976
No 5
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=99.66 E-value=1.2e-16 Score=131.63 Aligned_cols=86 Identities=31% Similarity=0.413 Sum_probs=75.9
Q ss_pred cccccccCCeeechhhhhhhh-hhcCCCeEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcccC
Q psy8943 2 IAQGTIRRGSRCSTSKAFLRP-IRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINS 80 (134)
Q Consensus 2 ~~~~~~~~g~R~sa~~~~l~~-~~~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai~t 80 (134)
+++.++..|.|.++...|+.+ ...++|++|++++.|++|+++ +++++||++...+....+.+ ++||||||+|+|
T Consensus 198 ~~~~~~~~g~r~s~~~~~~~~~~~~r~nl~v~~~~~v~~i~~~----~~~a~gv~~~~~~~~~~~~a-~~VILsAGai~S 272 (526)
T 3t37_A 198 PNSLNIRDGRRVTAADAWLTKAVRGRKNLTILTGSRVRRLKLE----GNQVRSLEVVGRQGSAEVFA-DQIVLCAGALES 272 (526)
T ss_dssp CCCBCEETTEECCHHHHHSCHHHHTCTTEEEECSCEEEEEEEE----TTEEEEEEEEETTEEEEEEE-EEEEECSHHHHH
T ss_pred cccccccCCcccccccccccccccCCCCeEEEeCCEEEEEEec----CCeEEEEEEEecCceEEEee-cceEEcccccCC
Confidence 356677789999999888866 457899999999999999998 46999999999888888888 899999999999
Q ss_pred Cchhhhcccccc
Q psy8943 81 PQLLMVSGGSSV 92 (134)
Q Consensus 81 P~lLl~SGig~~ 92 (134)
|+|||+||||+.
T Consensus 273 P~LLl~SGig~~ 284 (526)
T 3t37_A 273 PALLMRSGIGPH 284 (526)
T ss_dssp HHHHHHTTEECH
T ss_pred cchhhhccCCch
Confidence 999999999974
No 6
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=99.64 E-value=1.7e-16 Score=132.81 Aligned_cols=88 Identities=33% Similarity=0.580 Sum_probs=78.4
Q ss_pred ccccccc-CCeeechhhhhhhhhhcCCCeEEEccceEEEEEeccCCCCCeEEEEEEEeC--CeEEEEEeceEEEecCCcc
Q psy8943 2 IAQGTIR-RGSRCSTSKAFLRPIRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRD--GRKHIIRAKKEIISSAGAI 78 (134)
Q Consensus 2 ~~~~~~~-~g~R~sa~~~~l~~~~~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~--g~~~~~~a~~~vIlaaGai 78 (134)
+++.++. +|.|+++..+||.++..++|++|++++.|++|+++. +++++||++.+. |..+.++|+++||||||++
T Consensus 196 ~~~~~~~~~g~R~s~~~a~l~~a~~~~~~~i~~~~~V~~i~~~~---~~~~~GV~~~~~~~g~~~~i~A~k~VIlaaG~~ 272 (546)
T 2jbv_A 196 FFQINRRADGTRSSSSVSYIHPIVEQENFTLLTGLRARQLVFDA---DRRCTGVDIVDSAFGHTHRLTARNEVVLSTGAI 272 (546)
T ss_dssp ECEECBCTTSBBCCHHHHHTGGGTTCTTEEEECSCEEEEEEECT---TSBEEEEEEESSTTSCEEEEEEEEEEEECSHHH
T ss_pred eeeeecCCCCeEcCHHHHHHHHHhcCCCcEEEeCCEEEEEEECC---CCeEEEEEEEECCCCcEEEEEeCccEEEecCcc
Confidence 4667787 899999999999888778999999999999999972 268999999875 8888899977999999999
Q ss_pred cCCchhhhcccccc
Q psy8943 79 NSPQLLMVSGGSSV 92 (134)
Q Consensus 79 ~tP~lLl~SGig~~ 92 (134)
+||+||++||||+.
T Consensus 273 ~sp~lL~~SGiG~~ 286 (546)
T 2jbv_A 273 DTPKLLMLSGIGPA 286 (546)
T ss_dssp HHHHHHHHTTEECH
T ss_pred CCchhhhhcCCCch
Confidence 99999999999975
No 7
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=99.55 E-value=3.5e-15 Score=123.77 Aligned_cols=85 Identities=16% Similarity=0.231 Sum_probs=72.3
Q ss_pred ccccccCCeeechhhhhhhhhhcCCCeEEEccceEEEEEeccCCCCCeEEEEEEEe-CC---eEEEEEeceEEEecCCcc
Q psy8943 3 AQGTIRRGSRCSTSKAFLRPIRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILR-DG---RKHIIRAKKEIISSAGAI 78 (134)
Q Consensus 3 ~~~~~~~g~R~sa~~~~l~~~~~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~-~g---~~~~~~a~~~vIlaaGai 78 (134)
|...+.+| |+++..+||.++..++|++|++++.|++|+++.. +.+++||++.+ +| ..++++| ++||||||++
T Consensus 217 C~~gc~~g-R~s~~~~~l~~a~~~~n~~i~~~~~v~~i~~~~~--g~~~~gV~~~~~~g~~~~~~~~~A-~~VIlaaGa~ 292 (507)
T 1coy_A 217 VIYGNNAG-KKSLDKTYLAQAAATGKLTITTLHRVTKVAPATG--SGYSVTMEQIDEQGNVVATKVVTA-DRVFFAAGSV 292 (507)
T ss_dssp STTCCSSS-BCCTTTTHHHHHHHTTCEEEECSEEEEEEEECSS--SSEEEEEEEECTTSCEEEEEEEEE-EEEEECSHHH
T ss_pred ccccCCCC-CcChHHHHHHHHHhcCCcEEEeCCEEEEEEECCC--CCEEEEEEEeCCCCcccccEEEEe-CEEEEccCcc
Confidence 44456789 9999999999888889999999999999999831 23899999986 56 4678899 5999999999
Q ss_pred cCCchhhhcc-ccc
Q psy8943 79 NSPQLLMVSG-GSS 91 (134)
Q Consensus 79 ~tP~lLl~SG-ig~ 91 (134)
+||+||++|| +|.
T Consensus 293 ~sp~lL~~Sg~iG~ 306 (507)
T 1coy_A 293 GTSKLLVSMKAQGH 306 (507)
T ss_dssp HHHHHHHHHHHTTS
T ss_pred CCHHHHHhcccCCC
Confidence 9999999999 763
No 8
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=99.53 E-value=8.8e-15 Score=121.17 Aligned_cols=84 Identities=20% Similarity=0.184 Sum_probs=71.9
Q ss_pred ccccccCCeeechhhhhhhhhhcCCCeEEEccceEEEEEeccCCCCCeEEEEEEEe-CC---eEEEEEeceEEEecCCcc
Q psy8943 3 AQGTIRRGSRCSTSKAFLRPIRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILR-DG---RKHIIRAKKEIISSAGAI 78 (134)
Q Consensus 3 ~~~~~~~g~R~sa~~~~l~~~~~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~-~g---~~~~~~a~~~vIlaaGai 78 (134)
|...+.+| |+++..+|+.++..++|++|++++.|++|+++.. +++++||++.+ +| ...+++| ++||||||++
T Consensus 212 c~~g~~~g-r~s~~~~~l~~a~~~~n~~i~~~~~V~~i~~~~~--g~~~~gV~~~~~~g~~~~~~~v~A-~~VIlaaG~~ 287 (504)
T 1n4w_A 212 VIYGNNHG-KQSLDKTYLAAALGTGKVTIQTLHQVKTIRQTKD--GGYALTVEQKDTDGKLLATKEISC-RYLFLGAGSL 287 (504)
T ss_dssp STTCCSSS-BCCTTTTHHHHHHHTTSEEEEESEEEEEEEECTT--SSEEEEEEEECTTCCEEEEEEEEE-EEEEECSHHH
T ss_pred ccccCCCC-ccCHHHHHHHHHHhcCCcEEEeCCEEEEEEECCC--CCEEEEEEEeCCCCccceeEEEee-CEEEEccCCC
Confidence 44456889 9999999998888888999999999999999831 24899999985 56 5678899 5999999999
Q ss_pred cCCchhhhcc-cc
Q psy8943 79 NSPQLLMVSG-GS 90 (134)
Q Consensus 79 ~tP~lLl~SG-ig 90 (134)
+||+||++|| +|
T Consensus 288 ~s~~lL~~Sg~ig 300 (504)
T 1n4w_A 288 GSTELLVRARDTG 300 (504)
T ss_dssp HHHHHHHHHHHTT
T ss_pred CCHHHHHhccccC
Confidence 9999999999 55
No 9
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=99.50 E-value=1.3e-14 Score=120.77 Aligned_cols=86 Identities=19% Similarity=0.254 Sum_probs=73.5
Q ss_pred ccccccCCeeechhhhhhhhhhcCCCeEEEccceEEEEEeccCCCCCeEEEEEEEe--CCe--EEEEEeceEEEecCCcc
Q psy8943 3 AQGTIRRGSRCSTSKAFLRPIRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILR--DGR--KHIIRAKKEIISSAGAI 78 (134)
Q Consensus 3 ~~~~~~~g~R~sa~~~~l~~~~~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~--~g~--~~~~~a~~~vIlaaGai 78 (134)
++.++.+|.|+++..+|+.++.+++|++|++++.|++|+++ +++++||++.+ +|. ...+.+.++||||+|++
T Consensus 185 ~~~~~~~g~R~s~~~~~l~~~~~~~~~~i~~~~~V~~i~~~----~~~~~gV~~~~~~~g~~~~~~v~~~~~VIlaaG~~ 260 (546)
T 1kdg_A 185 SAFDFLNGKRAGPVATYLQTALARPNFTFKTNVMVSNVVRN----GSQILGVQTNDPTLGPNGFIPVTPKGRVILSAGAF 260 (546)
T ss_dssp CCBCEETTEECHHHHTHHHHHHTCTTEEEECSCCEEEEEEE----TTEEEEEEESCTTSSGGGEEEEEEEEEEEECSHHH
T ss_pred eeeccCCCcccCHHHHHHHHHhhCCCcEEEeCCEEEEEEEe----CCEEEEEEEEecCCCceeEEEEEeCCEEEEcCChh
Confidence 45667789999999899988888899999999999999997 35899999986 364 34565669999999999
Q ss_pred cCCchhhhcccccc
Q psy8943 79 NSPQLLMVSGGSSV 92 (134)
Q Consensus 79 ~tP~lLl~SGig~~ 92 (134)
+||+||++||||+.
T Consensus 261 ~sp~lL~~sGig~~ 274 (546)
T 1kdg_A 261 GTSRILFQSGIGPT 274 (546)
T ss_dssp HHHHHHHHTTBSCH
T ss_pred cCHHHHHHcCCCcH
Confidence 99999999999863
No 10
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=99.46 E-value=7.9e-14 Score=116.47 Aligned_cols=82 Identities=29% Similarity=0.506 Sum_probs=67.6
Q ss_pred cCCeeechhhhhhhhhhcCCCeEEEccceEEEEEeccCCCCCeEEEEEEEe-CCeEEEEE--eceEEEecCCcccCCchh
Q psy8943 8 RRGSRCSTSKAFLRPIRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILR-DGRKHIIR--AKKEIISSAGAINSPQLL 84 (134)
Q Consensus 8 ~~g~R~sa~~~~l~~~~~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~-~g~~~~~~--a~~~vIlaaGai~tP~lL 84 (134)
.+|.|+++.. |+.. +.++|++|++++.|++|+++.+ .+++++||++.+ +|..+.++ +.++||||||+++||+||
T Consensus 190 ~~g~r~s~~~-~~~~-~~~~~~~v~~~~~v~~i~~~~~-~~~~~~GV~~~~~~g~~~~~~v~a~k~VILaaGa~~sp~lL 266 (536)
T 1ju2_A 190 NKGTRHAADE-LLNK-GNSNNLRVGVHASVEKIIFSNA-PGLTATGVIYRDSNGTPHQAFVRSKGEVIVSAGTIGTPQLL 266 (536)
T ss_dssp TTSBBCCGGG-GGGG-SCTTTEEEEESCEEEEEEECCS-SSCBEEEEEEECTTSCEEEEEEEEEEEEEECCHHHHHHHHH
T ss_pred CCCeEecHHH-hhhh-hcCCCcEEEeCCEEEEEEECCC-CCCEEEEEEEEeCCCceEEEEeccCCEEEEcCcccCCHHHH
Confidence 4788888876 6644 4689999999999999999831 124899999986 67666664 669999999999999999
Q ss_pred hhcccccc
Q psy8943 85 MVSGGSSV 92 (134)
Q Consensus 85 l~SGig~~ 92 (134)
++||||+.
T Consensus 267 ~~SGig~~ 274 (536)
T 1ju2_A 267 LLSGVGPE 274 (536)
T ss_dssp HHTTEECH
T ss_pred HHcCCCCH
Confidence 99999874
No 11
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=99.06 E-value=1.6e-10 Score=98.29 Aligned_cols=79 Identities=18% Similarity=0.237 Sum_probs=67.7
Q ss_pred eeechhhhhhhhh------hcCCCeEEEccceEEEEEeccCCCCCeEEEEEEEe--CCeEEEEEeceEEEecCCcccCCc
Q psy8943 11 SRCSTSKAFLRPI------RLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILR--DGRKHIIRAKKEIISSAGAINSPQ 82 (134)
Q Consensus 11 ~R~sa~~~~l~~~------~~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~--~g~~~~~~a~~~vIlaaGai~tP~ 82 (134)
.|.++..+++.++ ..++|++|++++.|++|+++. ++++++||++.+ +|..+.+.+ ++||+|+|++.+|+
T Consensus 251 ~r~s~~~~~l~~~~~l~~~~~~~nv~v~~~~~V~~i~~~~--~~~~v~GV~~~~~~~g~~~~i~A-~~VIlaaG~~~s~~ 327 (623)
T 3pl8_A 251 VEWSSANTVFDLQNRPNTDAPEERFNLFPAVACERVVRNA--LNSEIESLHIHDLISGDRFEIKA-DVYVLTAGAVHNTQ 327 (623)
T ss_dssp EEECCHHHHCCCCCEEETTEEEEEEEEECSEEEEEEEECT--TSSCEEEEEEEETTTCCEEEECE-EEEEECSCTTHHHH
T ss_pred cccchHHhhhhhhhcchhhccCCCEEEEeCCEEEEEEEEC--CCCEEEEEEEEEcCCCcEEEEEC-CEEEEcCCCcCCHH
Confidence 4777788888776 666799999999999999873 134899999987 677788888 69999999999999
Q ss_pred hhhhcccccc
Q psy8943 83 LLMVSGGSSV 92 (134)
Q Consensus 83 lLl~SGig~~ 92 (134)
+|++||||+.
T Consensus 328 lL~~sgiG~~ 337 (623)
T 3pl8_A 328 LLVNSGFGQL 337 (623)
T ss_dssp HHHTTTSSCC
T ss_pred HHHhcCCCcc
Confidence 9999999875
No 12
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=98.85 E-value=2.3e-10 Score=96.82 Aligned_cols=46 Identities=30% Similarity=0.646 Sum_probs=43.4
Q ss_pred cccccccceeEEecCCCCChhHHHhcCCC-CCCccccchhHhhcCcC
Q psy8943 87 SGGSSVLNAMIYVRGNKNDYDQWERLGNS-GWGYKDVLPYFKKSEDN 132 (134)
Q Consensus 87 SGig~~~n~~~~~~g~~~d~~~w~~~~~~-~w~~~~~~p~~~~~~~~ 132 (134)
-|+++..|.|+|.||++.|||.|++++++ ||+|++++|||+|+|++
T Consensus 100 LGGsS~iN~m~y~Rg~~~Dyd~W~~~g~~~gW~~~~~lpyf~k~E~~ 146 (583)
T 3qvp_A 100 LGGSTLVNGGTWTRPHKAQVDSWETVFGNEGWNWDNVAAYSLQAERA 146 (583)
T ss_dssp TTGGGGTSCCBCCCCCHHHHHHHHHTSCCTTCSHHHHHHHHHHHEEE
T ss_pred cCCcCcccceEEEeCCHHHHHHHHHhCCCCCCChhHHHHHHHHHHhc
Confidence 39999999999999999999999998888 99999999999999976
No 13
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=98.83 E-value=3e-10 Score=95.77 Aligned_cols=45 Identities=31% Similarity=0.810 Sum_probs=43.1
Q ss_pred ccccccceeEEecCCCCChhHHHhc-CCCCCCccccchhHhhcCcC
Q psy8943 88 GGSSVLNAMIYVRGNKNDYDQWERL-GNSGWGYKDVLPYFKKSEDN 132 (134)
Q Consensus 88 Gig~~~n~~~~~~g~~~d~~~w~~~-~~~~w~~~~~~p~~~~~~~~ 132 (134)
|+++..|.|+|.||++.|||.|+++ |++||+|++++|||+|+|++
T Consensus 85 GGsS~iN~m~~~Rg~~~d~d~W~~~~G~~gWs~~~~~pyf~k~E~~ 130 (566)
T 3fim_B 85 GGSSSVHYMVMMRGSTEDFDRYAAVTGDEGWNWDNIQQFVRKNEMV 130 (566)
T ss_dssp TGGGGTSCCBCCCCCHHHHHHHHHHHTCTTSSHHHHHHHHHHHEEE
T ss_pred cCcccccceEEecCCHHHHHHHHhcCCCCCcCHHHHHHHHHHHhcc
Confidence 8899999999999999999999987 99999999999999999875
No 14
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=98.75 E-value=4.5e-10 Score=94.87 Aligned_cols=46 Identities=41% Similarity=0.884 Sum_probs=43.5
Q ss_pred cccccccceeEEecCCCCChhHHHhcCCCCCCccccchhHhhcCcC
Q psy8943 87 SGGSSVLNAMIYVRGNKNDYDQWERLGNSGWGYKDVLPYFKKSEDN 132 (134)
Q Consensus 87 SGig~~~n~~~~~~g~~~d~~~w~~~~~~~w~~~~~~p~~~~~~~~ 132 (134)
-|+++..|.|+|.||++.|||+|+++|++||+|++++|||+++|++
T Consensus 90 LGGsS~iN~m~~~rg~~~dyd~W~~~G~~gW~~~~~lpyf~k~e~~ 135 (577)
T 3q9t_A 90 LGGSSSLNYFTWVPGHKATFDQWEEFGGKEWTWDPLVPYLRKSATY 135 (577)
T ss_dssp TTGGGGTSCCEECCCCHHHHHTTHHHHCGGGSHHHHHHHHHHTEEE
T ss_pred ccCccccCceEeccCCHHHHHHHHHhCCCCCCHHHHHHHHHHHhcc
Confidence 4889999999999999999999999899999999999999999865
No 15
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=98.68 E-value=2.2e-09 Score=90.54 Aligned_cols=45 Identities=36% Similarity=0.847 Sum_probs=43.0
Q ss_pred ccccccceeEEecCCCCChhHHHhc-CCCCCCccccchhHhhcCcC
Q psy8943 88 GGSSVLNAMIYVRGNKNDYDQWERL-GNSGWGYKDVLPYFKKSEDN 132 (134)
Q Consensus 88 Gig~~~n~~~~~~g~~~d~~~w~~~-~~~~w~~~~~~p~~~~~~~~ 132 (134)
|+++..|.|.|.|+++.|||.|.+. |++||+|++++|||+++|++
T Consensus 105 GGsS~in~~~~~R~~~~D~d~W~~~~G~~gW~~~~l~pyf~k~E~~ 150 (587)
T 1gpe_A 105 GGSTLINGDSWTRPDKVQIDSWEKVFGMEGWNWDNMFEYMKKAEAA 150 (587)
T ss_dssp TGGGGTSCCEECCCCHHHHHHHHHTTCCTTCSHHHHHHHHHHTEEE
T ss_pred cccccccceEEecCCHHHHHHHHHhcCCCCCCHHHHHHHHHHHhcc
Confidence 8899999999999999999999988 99999999999999999965
No 16
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=98.44 E-value=1.8e-08 Score=84.14 Aligned_cols=46 Identities=35% Similarity=0.710 Sum_probs=42.9
Q ss_pred cccccccceeEEecCCCCChhHHHh-cCCCCCCccccchhHhhcCcC
Q psy8943 87 SGGSSVLNAMIYVRGNKNDYDQWER-LGNSGWGYKDVLPYFKKSEDN 132 (134)
Q Consensus 87 SGig~~~n~~~~~~g~~~d~~~w~~-~~~~~w~~~~~~p~~~~~~~~ 132 (134)
-|+++..|.|.|.|+++.||+.|.+ +|++||+|++++|||+++|++
T Consensus 93 lGGsS~in~~~~~R~~~~d~d~w~~~~G~~gW~~~~l~pyf~k~e~~ 139 (546)
T 2jbv_A 93 MGGCSSHNSCIAFWAPREDLDEWEAKYGATGWNAEAAWPLYKRLETN 139 (546)
T ss_dssp TTGGGGTSCCBCCCCCHHHHHHHHHTTCCTTCSHHHHHHHHHHHEEE
T ss_pred cccCccccceEEecCCHHHHHHHHHhcCCCCCCHHHHHHHHHHHhhc
Confidence 3888999999999999999999998 799999999999999999864
No 17
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=98.35 E-value=3.4e-08 Score=81.03 Aligned_cols=45 Identities=44% Similarity=0.973 Sum_probs=42.1
Q ss_pred ccccccceeEEecCCCCChhHHHh-cCCCCCCccccchhHhhcCcC
Q psy8943 88 GGSSVLNAMIYVRGNKNDYDQWER-LGNSGWGYKDVLPYFKKSEDN 132 (134)
Q Consensus 88 Gig~~~n~~~~~~g~~~d~~~w~~-~~~~~w~~~~~~p~~~~~~~~ 132 (134)
|+++..|.|.|.|+++.|||.|++ .++.+|+|++++|||+++|.+
T Consensus 98 GGsS~in~~~~~R~~~~Dfd~w~~~~~~~~w~~~~~~pyf~~~E~~ 143 (526)
T 3t37_A 98 GGSSCLHAMGYMRGHPSDFQAWVDASGDRRWGWDELLPVFQAIEDH 143 (526)
T ss_dssp TGGGGTSCCBCCCCCHHHHHHHHHHHSCGGGSHHHHHHHHHHHEEC
T ss_pred CcHHHHhhCEEecCCHHHHHHHHHhcCCCCCChhhhhhhhhhhhhc
Confidence 889999999999999999999986 588999999999999999864
No 18
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=97.81 E-value=1.5e-06 Score=71.77 Aligned_cols=42 Identities=17% Similarity=0.350 Sum_probs=38.5
Q ss_pred cccccccceeEEecCCCCChhHHHhcCCCCCCccccc-hhHhhcCcC
Q psy8943 87 SGGSSVLNAMIYVRGNKNDYDQWERLGNSGWGYKDVL-PYFKKSEDN 132 (134)
Q Consensus 87 SGig~~~n~~~~~~g~~~d~~~w~~~~~~~w~~~~~~-p~~~~~~~~ 132 (134)
-|+++..|.|.|.|+++.||+.|+ ++|.|++++ |||+++|+.
T Consensus 107 lGGsS~in~~~~~R~~~~Dfd~w~----~~w~~~~l~~pyy~~~E~~ 149 (504)
T 1n4w_A 107 VGGGSLVNGGMAVEPKRSYFEEIL----PRVDSSEMYDRYFPRANSM 149 (504)
T ss_dssp TTGGGGTSCCBCCCCCHHHHHHHC----TTSCHHHHHHTHHHHHHHH
T ss_pred cchHHHhhCeEEEeCCHHHHHHhc----cccchhhhhhHHHHHHHHH
Confidence 388999999999999999999996 689999999 999999853
No 19
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=97.70 E-value=3.2e-06 Score=69.80 Aligned_cols=41 Identities=20% Similarity=0.421 Sum_probs=38.0
Q ss_pred ccccccceeEEecCCCCChhHHHhcCCCCCCccccc-hhHhhcCcC
Q psy8943 88 GGSSVLNAMIYVRGNKNDYDQWERLGNSGWGYKDVL-PYFKKSEDN 132 (134)
Q Consensus 88 Gig~~~n~~~~~~g~~~d~~~w~~~~~~~w~~~~~~-p~~~~~~~~ 132 (134)
|+++..|.|.|.|+++.||+.|+ ++|.|++++ |||+++|++
T Consensus 113 GGsS~in~~~~~R~~~~dfd~w~----~~w~~~~l~~pyy~~~E~~ 154 (507)
T 1coy_A 113 GGGSLVNGGMAVTPKRNYFEEIL----PSVDSNEMYNKYFPRANTG 154 (507)
T ss_dssp TGGGGTSCCBCCCCCHHHHHHHC----TTSCHHHHHHTHHHHHHHH
T ss_pred chHHHhhCeEEeeCCHHHHHhhC----CccchhcchhHHHHHHHHH
Confidence 88999999999999999999996 589999999 999999853
No 20
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=97.62 E-value=0.00013 Score=59.91 Aligned_cols=53 Identities=17% Similarity=0.335 Sum_probs=45.3
Q ss_pred cCCCeEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcccC
Q psy8943 25 LRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINS 80 (134)
Q Consensus 25 ~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai~t 80 (134)
.+.+++|++++.|++|+.+ ++++++||.+.+++...+++++|.||||+|++..
T Consensus 213 ~~~Gv~i~~~t~v~~L~~~---~~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~~~ 265 (510)
T 4at0_A 213 EKLGVRAEYDMRVQTLVTD---DTGRVVGIVAKQYGKEVAVRARRGVVLATGSFAY 265 (510)
T ss_dssp HHTTCEEECSEEEEEEEEC---TTCCEEEEEEEETTEEEEEEEEEEEEECCCCCTT
T ss_pred HHcCCEEEecCEeEEEEEC---CCCcEEEEEEEECCcEEEEEeCCeEEEeCCChhh
Confidence 3458999999999999887 2468999999888888889996699999999873
No 21
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=96.68 E-value=0.00027 Score=58.79 Aligned_cols=40 Identities=35% Similarity=0.602 Sum_probs=34.8
Q ss_pred ccccccceeEEecCCCCChhHHHhcCCCCCCccccchhHhhcCc
Q psy8943 88 GGSSVLNAMIYVRGNKNDYDQWERLGNSGWGYKDVLPYFKKSED 131 (134)
Q Consensus 88 Gig~~~n~~~~~~g~~~d~~~w~~~~~~~w~~~~~~p~~~~~~~ 131 (134)
|+++..|.|.|.|+++.||+.+ | .+|.|++++|||+++|+
T Consensus 104 GGsS~in~~~~~R~~~~d~~~~---G-~~W~~~~~~p~~~~~e~ 143 (536)
T 1ju2_A 104 GGTSIINAGVYARANTSIYSAS---G-VDWDMDLVNQTYEWVED 143 (536)
T ss_dssp TGGGGTSCCEECBCCTTSSTTS---S-SCCCHHHHHHHHHHHHH
T ss_pred cccccccCeEEEeCCHHHHhhc---c-CCCChHHHHHHHHhhhc
Confidence 8889999999999999999753 2 34999999999999885
No 22
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=96.27 E-value=0.011 Score=49.01 Aligned_cols=52 Identities=19% Similarity=0.329 Sum_probs=43.2
Q ss_pred cCCCeEEEccceEEEEEeccCCCCCeEEEEEEEe-CCeEEEEEeceEEEecCCcccC
Q psy8943 25 LRKNLHIAMETQALRLLFDKSGPVPKAVGIEILR-DGRKHIIRAKKEIISSAGAINS 80 (134)
Q Consensus 25 ~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~-~g~~~~~~a~~~vIlaaGai~t 80 (134)
...+++|++++.|++|+.+ ++++++||.+.+ +|....+.+ +.||+|+|....
T Consensus 266 ~~~gv~i~~~~~v~~l~~~---~~g~v~Gv~~~~~~g~~~~i~a-~~VVlAtGg~~~ 318 (571)
T 1y0p_A 266 VKRNIDLRMNTRGIEVLKD---DKGTVKGILVKGMYKGYYWVKA-DAVILATGGFAK 318 (571)
T ss_dssp HHTTCEEESSEEEEEEEEC---TTSCEEEEEEEETTTEEEEEEC-SEEEECCCCCTT
T ss_pred HhcCCEEEeCCEeeEeEEc---CCCeEEEEEEEeCCCcEEEEEC-CeEEEeCCCccc
Confidence 4468999999999999876 236899999987 787778888 679999998764
No 23
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=96.22 E-value=0.012 Score=48.88 Aligned_cols=53 Identities=13% Similarity=0.262 Sum_probs=43.9
Q ss_pred cCCCeEEEccceEEEEEeccCCCCCeEEEEEEEe-CCeEEEEEeceEEEecCCcccCC
Q psy8943 25 LRKNLHIAMETQALRLLFDKSGPVPKAVGIEILR-DGRKHIIRAKKEIISSAGAINSP 81 (134)
Q Consensus 25 ~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~-~g~~~~~~a~~~vIlaaGai~tP 81 (134)
...+++|++++.|++|+.+. +++++||.+.+ +|....+.+ +.||+|+|+....
T Consensus 261 ~~~gv~i~~~~~v~~l~~~~---~g~v~Gv~~~~~~g~~~~i~A-~~VVlAtGg~s~~ 314 (566)
T 1qo8_A 261 KEQGIDTRLNSRVVKLVVND---DHSVVGAVVHGKHTGYYMIGA-KSVVLATGGYGMN 314 (566)
T ss_dssp HHTTCCEECSEEEEEEEECT---TSBEEEEEEEETTTEEEEEEE-EEEEECCCCCTTC
T ss_pred HhcCCEEEeCCEEEEEEECC---CCcEEEEEEEeCCCcEEEEEc-CEEEEecCCcccC
Confidence 34589999999999998762 26899999886 777778889 8999999998763
No 24
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=96.11 E-value=0.00078 Score=55.67 Aligned_cols=38 Identities=32% Similarity=0.722 Sum_probs=34.7
Q ss_pred ccccccceeEEecCCCCChhH---HHhcCCCCCCccccchhHhhcCc
Q psy8943 88 GGSSVLNAMIYVRGNKNDYDQ---WERLGNSGWGYKDVLPYFKKSED 131 (134)
Q Consensus 88 Gig~~~n~~~~~~g~~~d~~~---w~~~~~~~w~~~~~~p~~~~~~~ 131 (134)
|+++..|.|+|.|+++.||+. | +.+|+|++ |||+++|.
T Consensus 94 GGsS~in~~~~~r~~~~d~d~~~~W----~~~w~~~~--p~~~k~e~ 134 (546)
T 1kdg_A 94 GGGTSVNGALYWYPNDGDFSSSVGW----PSSWTNHA--PYTSKLSS 134 (546)
T ss_dssp TGGGGTSCCBCCCCCGGGGCGGGTC----CGGGSCCH--HHHHHHHH
T ss_pred cccccccceEEecCChHHhcCcccC----ccccCccc--HHHHHHHh
Confidence 788889999999999999998 9 57999998 99999874
No 25
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=96.03 E-value=0.017 Score=48.18 Aligned_cols=52 Identities=19% Similarity=0.370 Sum_probs=42.7
Q ss_pred cCCCeEEEccceEEEEEeccCCCCCeEEEEEEEe-CCeEEEEEeceEEEecCCcccC
Q psy8943 25 LRKNLHIAMETQALRLLFDKSGPVPKAVGIEILR-DGRKHIIRAKKEIISSAGAINS 80 (134)
Q Consensus 25 ~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~-~g~~~~~~a~~~vIlaaGai~t 80 (134)
...+++|++++.|++|+.+. +++++||.+.+ +|....+.+ +.||||+|....
T Consensus 266 ~~~gv~i~~~t~v~~l~~~~---~g~v~GV~~~~~~G~~~~i~A-~~VVlAtGg~~~ 318 (572)
T 1d4d_A 266 VKRGTDIRLNSRVVRILEDA---SGKVTGVLVKGEYTGYYVIKA-DAVVIAAGGFAK 318 (572)
T ss_dssp HHTTCEEESSEEEEEEEEC-----CCEEEEEEEETTTEEEEEEC-SEEEECCCCCTT
T ss_pred HHcCCeEEecCEEEEEEECC---CCeEEEEEEEeCCCcEEEEEc-CEEEEeCCCCcc
Confidence 44589999999999998762 26899999986 777778889 899999998764
No 26
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=95.83 E-value=0.031 Score=47.38 Aligned_cols=51 Identities=31% Similarity=0.401 Sum_probs=42.9
Q ss_pred cCCCeEEEccceEEEEEeccCCCCCeEEEEEEEe--CCeEEEEEeceEEEecCCcccC
Q psy8943 25 LRKNLHIAMETQALRLLFDKSGPVPKAVGIEILR--DGRKHIIRAKKEIISSAGAINS 80 (134)
Q Consensus 25 ~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~--~g~~~~~~a~~~vIlaaGai~t 80 (134)
.+.+++|+.++.|++|+.+ ++++.||.+.+ +|....+.+ +.||||+|+...
T Consensus 166 ~~~gv~i~~~~~v~~Li~~----~g~v~Gv~~~~~~~G~~~~i~A-~~VVlATGG~~~ 218 (621)
T 2h88_A 166 LRYDTSYFVEYFALDLLME----NGECRGVIALCIEDGTIHRFRA-KNTVIATGGYGR 218 (621)
T ss_dssp TTSCCEEEETEEEEEEEEE----TTEEEEEEEEETTTCCEEEEEE-EEEEECCCCCGG
T ss_pred HhCCCEEEEceEEEEEEEE----CCEEEEEEEEEcCCCcEEEEEc-CeEEECCCcccc
Confidence 4578999999999999876 36899999875 677778888 799999998763
No 27
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=95.48 E-value=0.039 Score=45.78 Aligned_cols=54 Identities=17% Similarity=0.260 Sum_probs=42.1
Q ss_pred CCCeEEEccceEEEEEeccCCC---CCeEEEEEEEe--CCeEEEEEeceEEEecCCcccC
Q psy8943 26 RKNLHIAMETQALRLLFDKSGP---VPKAVGIEILR--DGRKHIIRAKKEIISSAGAINS 80 (134)
Q Consensus 26 ~~nl~i~t~~~V~ri~~~~~~~---~~~a~gV~~~~--~g~~~~~~a~~~vIlaaGai~t 80 (134)
.++++|+.++.|++|+.+..+. .+++.||.+.+ +|....+.+ +.||+|+|+...
T Consensus 151 ~~gv~i~~~~~v~~L~~~~~g~~~~~~~v~Gv~~~~~~~G~~~~i~A-~~VVlAtGg~~~ 209 (540)
T 1chu_A 151 HPNIRVLERTNAVDLIVSDKIGLPGTRRVVGAWVWNRNKETVETCHA-KAVVLATGGASK 209 (540)
T ss_dssp CTTEEEECSEEEEEEEEGGGTTCCSSCBEEEEEEEETTTTEEEEEEC-SEEEECCCCCGG
T ss_pred CCCCEEEeCcEEEEEEEcCCCCcccCCEEEEEEEEEcCCCcEEEEEc-CeEEECCCCccc
Confidence 3789999999999998842110 12899999886 677778888 799999998753
No 28
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=95.44 E-value=0.038 Score=46.33 Aligned_cols=51 Identities=22% Similarity=0.257 Sum_probs=41.6
Q ss_pred CCCeEEEccceEEEEEeccCCCCCeEEEEEEEe--CCeEEEEEeceEEEecCCcccC
Q psy8943 26 RKNLHIAMETQALRLLFDKSGPVPKAVGIEILR--DGRKHIIRAKKEIISSAGAINS 80 (134)
Q Consensus 26 ~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~--~g~~~~~~a~~~vIlaaGai~t 80 (134)
+.+++|+.++.|++|+.+. ++++.||.+.+ +|....+.+ +.||+|+|+...
T Consensus 155 ~~gv~i~~~~~v~~L~~~~---~g~v~Gv~~~~~~~g~~~~i~A-~~VVlAtGg~~~ 207 (588)
T 2wdq_A 155 KNHTTIFSEWYALDLVKNQ---DGAVVGCTALCIETGEVVYFKA-RATVLATGGAGR 207 (588)
T ss_dssp HTTCEEEETEEEEEEEECT---TSCEEEEEEEETTTCCEEEEEE-EEEEECCCCCGG
T ss_pred hCCCEEEeCcEEEEEEECC---CCEEEEEEEEEcCCCeEEEEEc-CEEEECCCCCcc
Confidence 4589999999999998752 35899999875 576778888 799999998653
No 29
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=95.39 E-value=0.055 Score=45.54 Aligned_cols=52 Identities=19% Similarity=0.245 Sum_probs=42.0
Q ss_pred cCCCeEEEccceEEEEEeccCCCCCeEEEEEEEe--CCeEEEEEeceEEEecCCcccCC
Q psy8943 25 LRKNLHIAMETQALRLLFDKSGPVPKAVGIEILR--DGRKHIIRAKKEIISSAGAINSP 81 (134)
Q Consensus 25 ~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~--~g~~~~~~a~~~vIlaaGai~tP 81 (134)
..+|++|+.++.|++|+.+ ++++.||.+.+ +|....+.+ +.||+|+|+....
T Consensus 146 ~~gnv~i~~~~~v~~l~~~----~g~v~Gv~~~~~~~G~~~~i~A-~~VVlAtGg~s~~ 199 (602)
T 1kf6_A 146 QFPQIQRFDEHFVLDILVD----DGHVRGLVAMNMMEGTLVQIRA-NAVVMATGGAGRV 199 (602)
T ss_dssp TCTTEEEEETEEEEEEEEE----TTEEEEEEEEETTTTEEEEEEC-SCEEECCCCCGGG
T ss_pred hCCCcEEEeCCEEEEEEEe----CCEEEEEEEEEcCCCcEEEEEc-CeEEECCCCCccc
Confidence 4456999999999999876 35899998764 677778888 6899999987543
No 30
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=95.10 E-value=0.043 Score=45.66 Aligned_cols=60 Identities=18% Similarity=0.232 Sum_probs=46.5
Q ss_pred cCCCeEEEccceEEEEEeccCCCCCeEEEEEEEe--CCeEEEEEeceEEEecCCcccCCchhhhcccc
Q psy8943 25 LRKNLHIAMETQALRLLFDKSGPVPKAVGIEILR--DGRKHIIRAKKEIISSAGAINSPQLLMVSGGS 90 (134)
Q Consensus 25 ~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~--~g~~~~~~a~~~vIlaaGai~tP~lLl~SGig 90 (134)
...+++|++++.|++|..+ ++++.+|.+.+ +|....+++ +.||+|+|+. ++.++...|+.
T Consensus 181 ~~~G~~i~~~~~V~~l~~~----~g~v~gV~~~d~~tg~~~~i~A-~~VV~AaG~~-s~~l~~~~g~~ 242 (561)
T 3da1_A 181 VARGAVALNYMKVESFIYD----QGKVVGVVAKDRLTDTTHTIYA-KKVVNAAGPW-VDTLREKDRSK 242 (561)
T ss_dssp HHTTCEEEESEEEEEEEEE----TTEEEEEEEEETTTCCEEEEEE-EEEEECCGGG-HHHHHHTTTCC
T ss_pred HHcCCEEEcCCEEEEEEEc----CCeEEEEEEEEcCCCceEEEEC-CEEEECCCcc-hHHHHHhcCCC
Confidence 3458999999999999886 35889999887 676778899 7999999975 55555544543
No 31
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=94.98 E-value=0.037 Score=46.18 Aligned_cols=58 Identities=16% Similarity=0.225 Sum_probs=44.4
Q ss_pred cCCCeEEEccceEEEEEeccCCCCCeEEEEEEEe--CCeEEEEEeceEEEecCCcccCCchhhhcc
Q psy8943 25 LRKNLHIAMETQALRLLFDKSGPVPKAVGIEILR--DGRKHIIRAKKEIISSAGAINSPQLLMVSG 88 (134)
Q Consensus 25 ~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~--~g~~~~~~a~~~vIlaaGai~tP~lLl~SG 88 (134)
...+++|++++.|++|..+ ++++.+|.+.+ ++....+++ +.||+|+|+. ++.++...|
T Consensus 199 ~~~Ga~i~~~t~V~~l~~~----~~~v~gV~~~d~~tg~~~~i~A-~~VV~AaG~w-s~~l~~~~g 258 (571)
T 2rgh_A 199 AEDGAYLVSKMKAVGFLYE----GDQIVGVKARDLLTDEVIEIKA-KLVINTSGPW-VDKVRNLNF 258 (571)
T ss_dssp HHTTCEEESSEEEEEEEEE----TTEEEEEEEEETTTCCEEEEEB-SCEEECCGGG-HHHHHTTCC
T ss_pred HHcCCeEEeccEEEEEEEe----CCEEEEEEEEEcCCCCEEEEEc-CEEEECCChh-HHHHHHhhc
Confidence 3467999999999999876 35788999876 566667888 7999999976 555544333
No 32
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=94.84 E-value=0.027 Score=45.24 Aligned_cols=53 Identities=13% Similarity=0.176 Sum_probs=35.4
Q ss_pred cCCCeEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcccCCchhh
Q psy8943 25 LRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQLLM 85 (134)
Q Consensus 25 ~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai~tP~lLl 85 (134)
.+.+.+|.+++.|++|+.+ +++++||... +|. ++.+ +.||++++...+.+.|+
T Consensus 232 ~~~Gg~I~~~~~V~~I~~~----~~~~~gV~~~-~g~--~~~a-d~VV~~a~~~~~~~~Ll 284 (501)
T 4dgk_A 232 QDLGGEVVLNARVSHMETT----GNKIEAVHLE-DGR--RFLT-QAVASNADVVHTYRDLL 284 (501)
T ss_dssp HHTTCEEECSCCEEEEEEE----TTEEEEEEET-TSC--EEEC-SCEEECCC---------
T ss_pred HHhCCceeeecceeEEEee----CCeEEEEEec-CCc--EEEc-CEEEECCCHHHHHHHhc
Confidence 3457899999999999988 4689999876 444 3567 78999999888776554
No 33
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=94.82 E-value=0.038 Score=47.14 Aligned_cols=49 Identities=18% Similarity=0.224 Sum_probs=41.4
Q ss_pred CCCeEEEccceEEEEEeccCCCCCeEEEEEEEe--CCeEEEEEeceEEEecCCccc
Q psy8943 26 RKNLHIAMETQALRLLFDKSGPVPKAVGIEILR--DGRKHIIRAKKEIISSAGAIN 79 (134)
Q Consensus 26 ~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~--~g~~~~~~a~~~vIlaaGai~ 79 (134)
+.+++|+.++.|++|+.+ ++++.||.+.+ +|....+.+ +.||||+|+..
T Consensus 170 ~~gv~i~~~~~v~~L~~~----~g~v~Gv~~~~~~~G~~~~i~A-~~VVlATGG~~ 220 (660)
T 2bs2_A 170 KLGVSIQDRKEAIALIHQ----DGKCYGAVVRDLVTGDIIAYVA-KGTLIATGGYG 220 (660)
T ss_dssp HHTCEEECSEEEEEEEEE----TTEEEEEEEEETTTCCEEEEEC-SEEEECCCCCG
T ss_pred hCCCEEEECcEEEEEEec----CCEEEEEEEEECCCCcEEEEEc-CEEEEccCcch
Confidence 458999999999999876 36899998875 677778888 79999999876
No 34
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=94.03 E-value=0.14 Score=39.46 Aligned_cols=49 Identities=20% Similarity=0.272 Sum_probs=40.0
Q ss_pred cCCCeEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcc
Q psy8943 25 LRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAI 78 (134)
Q Consensus 25 ~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai 78 (134)
...+++|+.++.|+.|..+ ++.++||.+.+.+....+.+ +.||.|.|.-
T Consensus 113 ~~~gv~i~~~~~v~~i~~~----~~~v~gv~~~~~~~~~~~~a-~~vV~A~G~~ 161 (397)
T 3cgv_A 113 AKAGADVWVKSPALGVIKE----NGKVAGAKIRHNNEIVDVRA-KMVIAADGFE 161 (397)
T ss_dssp HHHTCEEESSCCEEEEEEE----TTEEEEEEEEETTEEEEEEE-EEEEECCCTT
T ss_pred HhCCCEEEECCEEEEEEEe----CCEEEEEEEEECCeEEEEEc-CEEEECCCcc
Confidence 3468999999999999876 35788899887666778888 7999998864
No 35
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=93.58 E-value=0.073 Score=42.02 Aligned_cols=52 Identities=29% Similarity=0.401 Sum_probs=39.1
Q ss_pred cCCCeEEEccc---eEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcccCCchhh
Q psy8943 25 LRKNLHIAMET---QALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQLLM 85 (134)
Q Consensus 25 ~~~nl~i~t~~---~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai~tP~lLl 85 (134)
.+.+++|++++ .|++|..+ +++++||... +|. .+.+ +.||+|+|+. |++|+.
T Consensus 172 ~~~Gv~i~~~t~~~~V~~i~~~----~~~v~gV~t~-~G~--~i~A-d~VV~AtG~~-s~~l~~ 226 (438)
T 3dje_A 172 QRMGVKFVTGTPQGRVVTLIFE----NNDVKGAVTA-DGK--IWRA-ERTFLCAGAS-AGQFLD 226 (438)
T ss_dssp HHTTCEEEESTTTTCEEEEEEE----TTEEEEEEET-TTE--EEEC-SEEEECCGGG-GGGTSC
T ss_pred HhcCCEEEeCCcCceEEEEEec----CCeEEEEEEC-CCC--EEEC-CEEEECCCCC-hhhhcC
Confidence 34579999999 99999876 3578787754 443 5677 7899999986 556654
No 36
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=93.47 E-value=0.076 Score=45.37 Aligned_cols=50 Identities=20% Similarity=0.304 Sum_probs=40.8
Q ss_pred CeEEEccceEEEEEeccCCCCCeEEEEEEEe--CCeEEEEEeceEEEecCCccc
Q psy8943 28 NLHIAMETQALRLLFDKSGPVPKAVGIEILR--DGRKHIIRAKKEIISSAGAIN 79 (134)
Q Consensus 28 nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~--~g~~~~~~a~~~vIlaaGai~ 79 (134)
+++|+.++.|+.|+.+.+ ..+++.||.+.+ ++....+.| +.||||+|+..
T Consensus 182 gV~i~~~~~v~dLi~~~~-~~g~v~Gv~~~~~~~g~~~~i~A-k~VVLATGG~g 233 (662)
T 3gyx_A 182 QDRIIERIFIVKLLLDKN-TPNRIAGAVGFNLRANEVHIFKA-NAMVVACGGAV 233 (662)
T ss_dssp TTTEECSEEECCCEECSS-STTBEEEEEEEESSSSCEEEEEC-SEEEECCCCBC
T ss_pred CcEEEEceEEEEEEEeCC-ccceEEEEEEEEcCCCcEEEEEe-CEEEECCCccc
Confidence 899999999999988731 114999998765 577778889 79999999876
No 37
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=93.45 E-value=0.078 Score=40.20 Aligned_cols=59 Identities=12% Similarity=0.120 Sum_probs=41.0
Q ss_pred cCCCeEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcccCCchhhhc-ccc
Q psy8943 25 LRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQLLMVS-GGS 90 (134)
Q Consensus 25 ~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai~tP~lLl~S-Gig 90 (134)
.+.+++|++++.|++|..+. ++.+ .|.. .+|....+.+ +.||+|+|+. ++.|+... |+.
T Consensus 161 ~~~Gv~i~~~~~v~~i~~~~---~~~~-~v~~-~~g~~~~~~a-~~VV~A~G~~-s~~l~~~~~g~~ 220 (369)
T 3dme_A 161 ESDGAQLVFHTPLIAGRVRP---EGGF-ELDF-GGAEPMTLSC-RVLINAAGLH-APGLARRIEGIP 220 (369)
T ss_dssp HHTTCEEECSCCEEEEEECT---TSSE-EEEE-CTTSCEEEEE-EEEEECCGGG-HHHHHHTEETSC
T ss_pred HHCCCEEECCCEEEEEEEcC---CceE-EEEE-CCCceeEEEe-CEEEECCCcc-hHHHHHHhcCCC
Confidence 44679999999999998762 2222 3433 2554456888 7899999986 66666655 653
No 38
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=93.41 E-value=0.16 Score=42.93 Aligned_cols=51 Identities=18% Similarity=0.190 Sum_probs=40.5
Q ss_pred Ce-EEEccceEEEEEeccCCCCCeEEEEEEEe--CCeEEEEEeceEEEecCCcccC
Q psy8943 28 NL-HIAMETQALRLLFDKSGPVPKAVGIEILR--DGRKHIIRAKKEIISSAGAINS 80 (134)
Q Consensus 28 nl-~i~t~~~V~ri~~~~~~~~~~a~gV~~~~--~g~~~~~~a~~~vIlaaGai~t 80 (134)
++ +|+.++.|++|+.+.+ ..++++||.+.+ ++....+.+ +.||+|+|+...
T Consensus 166 gv~~i~~~~~v~~L~~~~~-~~g~v~Gv~~~~~~~g~~~~i~A-~~VVlAtGG~~~ 219 (643)
T 1jnr_A 166 GEENIYERVFIFELLKDNN-DPNAVAGAVGFSVREPKFYVFKA-KAVILATGGATL 219 (643)
T ss_dssp CGGGEECSEEEEEEEECTT-CTTBEEEEEEEESSSSCEEEEEC-SEEEECCCCBCS
T ss_pred CCcEEEecCEEEEEEEcCC-ccceeEEEEEEEecCCcEEEEEc-CEEEECCCcccc
Confidence 79 9999999999988621 013899998764 666677888 899999998765
No 39
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=93.39 E-value=0.53 Score=35.10 Aligned_cols=59 Identities=12% Similarity=0.095 Sum_probs=45.2
Q ss_pred hhcCCCeEEEccceEEEEEeccCCCCCeEEEEEEEe--CCeEEEEEeceEEEecCCcccCCchhhh
Q psy8943 23 IRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILR--DGRKHIIRAKKEIISSAGAINSPQLLMV 86 (134)
Q Consensus 23 ~~~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~--~g~~~~~~a~~~vIlaaGai~tP~lLl~ 86 (134)
+....++++++++.|.+|.-+ ++++++|.+.+ ++....+.+ +.||+|.|..-++.+|..
T Consensus 218 l~~~~gv~i~~~~~v~~i~~~----~~~~~~v~~~~~~~g~~~~i~~-D~vi~a~G~~p~~~~~~~ 278 (338)
T 3itj_A 218 AEKNEKIEILYNTVALEAKGD----GKLLNALRIKNTKKNEETDLPV-SGLFYAIGHTPATKIVAG 278 (338)
T ss_dssp HHHCTTEEEECSEEEEEEEES----SSSEEEEEEEETTTTEEEEEEC-SEEEECSCEEECCGGGBT
T ss_pred HHhcCCeEEeecceeEEEEcc----cCcEEEEEEEECCCCceEEEEe-CEEEEEeCCCCChhHhhC
Confidence 334558999999999999765 34688899887 566667887 799999998766665543
No 40
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=93.35 E-value=0.22 Score=40.55 Aligned_cols=51 Identities=22% Similarity=0.422 Sum_probs=40.9
Q ss_pred cCCCeEEEccceEEEEEeccCCCCCeEEEEEEEe-CCeEEEEEeceEEEecCCcccC
Q psy8943 25 LRKNLHIAMETQALRLLFDKSGPVPKAVGIEILR-DGRKHIIRAKKEIISSAGAINS 80 (134)
Q Consensus 25 ~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~-~g~~~~~~a~~~vIlaaGai~t 80 (134)
...+++|+.++.|+.|..+ ++++++|.+.. +|....+.+ +.||.|.|.-..
T Consensus 122 ~~~Gv~i~~~~~V~~v~~~----~~~v~gv~~~~~dG~~~~i~a-d~VI~AdG~~S~ 173 (512)
T 3e1t_A 122 ERKGVDVRERHEVIDVLFE----GERAVGVRYRNTEGVELMAHA-RFIVDASGNRTR 173 (512)
T ss_dssp HHTTCEEESSCEEEEEEEE----TTEEEEEEEECSSSCEEEEEE-EEEEECCCTTCS
T ss_pred HhCCCEEEcCCEEEEEEEE----CCEEEEEEEEeCCCCEEEEEc-CEEEECCCcchH
Confidence 3468999999999999876 35888998876 566667888 799999997543
No 41
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=93.26 E-value=0.33 Score=36.40 Aligned_cols=50 Identities=20% Similarity=0.191 Sum_probs=38.0
Q ss_pred hcCCCeEEEccceEEEEEeccCCCCCeEEEEEEEe--------C---CeEEEEEeceEEEecCCcc
Q psy8943 24 RLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILR--------D---GRKHIIRAKKEIISSAGAI 78 (134)
Q Consensus 24 ~~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~--------~---g~~~~~~a~~~vIlaaGai 78 (134)
....+++++.++.|++|..+ ++++.+|.+.. + +....+.+ +.||+|+|+.
T Consensus 130 ~~~~gv~i~~~~~V~~i~~~----~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~a-d~VV~AtG~~ 190 (284)
T 1rp0_A 130 LARPNVKLFNAVAAEDLIVK----GNRVGGVVTNWALVAQNHHTQSCMDPNVMEA-KIVVSSCGHD 190 (284)
T ss_dssp HTSTTEEEEETEEEEEEEEE----TTEEEEEEEEEHHHHTCTTTSSCCCCEEEEE-EEEEECCCSS
T ss_pred HhcCCCEEEcCcEEEEEEec----CCeEEEEEEeccccccccCccccCceEEEEC-CEEEECCCCc
Confidence 34578999999999999876 35788888752 2 33456788 7999999963
No 42
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=93.02 E-value=0.5 Score=34.94 Aligned_cols=66 Identities=8% Similarity=0.153 Sum_probs=48.3
Q ss_pred hhhhhhcCCCeEEEccceEEEEEeccCCCCCeEEEEEEEe--CCeEEEEEeceEEEecCCcccCCchhhhcccc
Q psy8943 19 FLRPIRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILR--DGRKHIIRAKKEIISSAGAINSPQLLMVSGGS 90 (134)
Q Consensus 19 ~l~~~~~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~--~g~~~~~~a~~~vIlaaGai~tP~lLl~SGig 90 (134)
++..+.+..++++++++.|++|.-+ +++.+|.+.+ +|....+.+ +.||+|.|..-+..+|..+|+.
T Consensus 195 ~~~~~~~~~gv~~~~~~~v~~i~~~-----~~~~~v~~~~~~~g~~~~~~~-D~vv~a~G~~p~~~~~~~~g~~ 262 (323)
T 3f8d_A 195 YVETVKKKPNVEFVLNSVVKEIKGD-----KVVKQVVVENLKTGEIKELNV-NGVFIEIGFDPPTDFAKSNGIE 262 (323)
T ss_dssp HHHHHHTCTTEEEECSEEEEEEEES-----SSEEEEEEEETTTCCEEEEEC-SEEEECCCEECCHHHHHHTTCC
T ss_pred HHHHHHhCCCcEEEeCCEEEEEecc-----CceeEEEEEECCCCceEEEEc-CEEEEEECCCCChhHHhhcCee
Confidence 3444445569999999999998654 4677888876 476667777 7999999976655666666654
No 43
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=93.00 E-value=0.1 Score=40.73 Aligned_cols=52 Identities=27% Similarity=0.288 Sum_probs=40.5
Q ss_pred cCCCeEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcccCCchhh
Q psy8943 25 LRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQLLM 85 (134)
Q Consensus 25 ~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai~tP~lLl 85 (134)
...+.+|.+++.|++|..+ ++++++|.. ++. .+.+ +.||+|+++..+++||.
T Consensus 207 ~~~G~~i~~~~~V~~i~~~----~~~~~gv~~--~g~--~~~a-d~VV~a~~~~~~~~ll~ 258 (425)
T 3ka7_A 207 SANGGKIHTGQEVSKILIE----NGKAAGIIA--DDR--IHDA-DLVISNLGHAATAVLCS 258 (425)
T ss_dssp HHTTCEEECSCCEEEEEEE----TTEEEEEEE--TTE--EEEC-SEEEECSCHHHHHHHTT
T ss_pred HHcCCEEEECCceeEEEEE----CCEEEEEEE--CCE--EEEC-CEEEECCCHHHHHHhcC
Confidence 3457899999999999887 357878865 353 4677 79999999988877664
No 44
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=92.94 E-value=0.37 Score=38.41 Aligned_cols=50 Identities=16% Similarity=0.251 Sum_probs=40.4
Q ss_pred CCCeEEEccceEEEEEeccCCCCCeEEEEEEEe--CCeEEEEEeceEEEecCCcccC
Q psy8943 26 RKNLHIAMETQALRLLFDKSGPVPKAVGIEILR--DGRKHIIRAKKEIISSAGAINS 80 (134)
Q Consensus 26 ~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~--~g~~~~~~a~~~vIlaaGai~t 80 (134)
..+++|+.++.|+.|..+ ++.+++|.+.+ +|....+.+ +.||.|.|+-..
T Consensus 112 ~~gv~i~~~~~v~~i~~~----~~~v~gv~~~~~~~G~~~~~~a-d~VV~AdG~~s~ 163 (453)
T 3atr_A 112 DRGVEIWDLTTAMKPIFE----DGYVKGAVLFNRRTNEELTVYS-KVVVEATGYSRS 163 (453)
T ss_dssp HTTCEEESSEEEEEEEEE----TTEEEEEEEEETTTTEEEEEEC-SEEEECCGGGCT
T ss_pred HcCCEEEeCcEEEEEEEE----CCEEEEEEEEEcCCCceEEEEc-CEEEECcCCchh
Confidence 468999999999999876 35788898876 677667888 799999997544
No 45
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=92.63 E-value=0.38 Score=36.00 Aligned_cols=60 Identities=22% Similarity=0.343 Sum_probs=46.1
Q ss_pred CCCeEEEccceEEEEEeccCCCCCeEEEEEEEe--CCeEEEEEeceEEEecCCcccCCchhhhcccc
Q psy8943 26 RKNLHIAMETQALRLLFDKSGPVPKAVGIEILR--DGRKHIIRAKKEIISSAGAINSPQLLMVSGGS 90 (134)
Q Consensus 26 ~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~--~g~~~~~~a~~~vIlaaGai~tP~lLl~SGig 90 (134)
..++++++++.|++|.-+ ++++.+|.+.+ +|....+.+ +.||+|.|..-++.+|..+|+.
T Consensus 202 ~~gv~i~~~~~v~~i~~~----~~~v~~v~~~~~~~g~~~~i~~-D~vi~a~G~~p~~~~l~~~gl~ 263 (319)
T 3cty_A 202 KRNIPYIMNAQVTEIVGD----GKKVTGVKYKDRTTGEEKLIET-DGVFIYVGLIPQTSFLKDSGVK 263 (319)
T ss_dssp HTTCCEECSEEEEEEEES----SSSEEEEEEEETTTCCEEEECC-SEEEECCCEEECCGGGTTSCCC
T ss_pred cCCcEEEcCCeEEEEecC----CceEEEEEEEEcCCCceEEEec-CEEEEeeCCccChHHHhhcccc
Confidence 468999999999999754 24688888875 676667777 7999999987777777666653
No 46
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=91.57 E-value=1.1 Score=33.20 Aligned_cols=55 Identities=27% Similarity=0.324 Sum_probs=42.4
Q ss_pred CCCeEEEccceEEEEEeccCCCCCeEEEEEEEe--CCeEEEEEeceEEEecCCcccCCchhh
Q psy8943 26 RKNLHIAMETQALRLLFDKSGPVPKAVGIEILR--DGRKHIIRAKKEIISSAGAINSPQLLM 85 (134)
Q Consensus 26 ~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~--~g~~~~~~a~~~vIlaaGai~tP~lLl 85 (134)
..+++|++++.|++|.-+ ++++.+|.+.+ +|....+.+ +.||+|.|..-++.+|.
T Consensus 192 ~~gv~v~~~~~v~~i~~~----~~~v~~v~~~~~~~g~~~~i~~-D~vi~a~G~~p~~~~l~ 248 (310)
T 1fl2_A 192 LKNVDIILNAQTTEVKGD----GSKVVGLEYRDRVSGDIHNIEL-AGIFVQIGLLPNTNWLE 248 (310)
T ss_dssp CTTEEEESSEEEEEEEES----SSSEEEEEEEETTTCCEEEEEC-SEEEECSCEEESCGGGT
T ss_pred CCCeEEecCCceEEEEcC----CCcEEEEEEEECCCCcEEEEEc-CEEEEeeCCccCchHHh
Confidence 368999999999999643 34788898886 466667777 79999999776666554
No 47
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=91.51 E-value=0.79 Score=33.74 Aligned_cols=63 Identities=11% Similarity=0.160 Sum_probs=46.5
Q ss_pred hhhhhhcCCCeEEEccceEEEEEeccCCCCCeEEEEEEEe-CCeEEEEEeceEEEecCCcccCCchhhh
Q psy8943 19 FLRPIRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILR-DGRKHIIRAKKEIISSAGAINSPQLLMV 86 (134)
Q Consensus 19 ~l~~~~~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~-~g~~~~~~a~~~vIlaaGai~tP~lLl~ 86 (134)
++..+....++++++++.|.+|.-+ ++++.+|.+.. +|....+.+ +.||+|.|..-.+.+|..
T Consensus 188 ~~~~~~~~~gv~~~~~~~v~~i~~~----~~~~~~v~~~~~~g~~~~~~~-D~vv~a~G~~p~~~~~~~ 251 (315)
T 3r9u_A 188 TVEKVKKNEKIELITSASVDEVYGD----KMGVAGVKVKLKDGSIRDLNV-PGIFTFVGLNVRNEILKQ 251 (315)
T ss_dssp HHHHHHHCTTEEEECSCEEEEEEEE----TTEEEEEEEECTTSCEEEECC-SCEEECSCEEECCGGGBC
T ss_pred HHHHHHhcCCeEEEeCcEEEEEEcC----CCcEEEEEEEcCCCCeEEeec-CeEEEEEcCCCCchhhhc
Confidence 3334445678999999999999765 34788888774 566667777 799999998766665544
No 48
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=91.33 E-value=0.16 Score=39.14 Aligned_cols=56 Identities=14% Similarity=0.202 Sum_probs=39.1
Q ss_pred cCCCeEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcccCCchhhhcccc
Q psy8943 25 LRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQLLMVSGGS 90 (134)
Q Consensus 25 ~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai~tP~lLl~SGig 90 (134)
.+.+++|+.++.|++|..+ ++++++|... +| .+.+ +.||+|+|+. ++.|+...|+.
T Consensus 160 ~~~Gv~i~~~~~v~~i~~~----~~~v~gv~~~-~g---~i~a-~~VV~A~G~~-s~~l~~~~g~~ 215 (382)
T 1y56_B 160 KEYGAKLLEYTEVKGFLIE----NNEIKGVKTN-KG---IIKT-GIVVNATNAW-ANLINAMAGIK 215 (382)
T ss_dssp HHTTCEEECSCCEEEEEES----SSBEEEEEET-TE---EEEC-SEEEECCGGG-HHHHHHHHTCC
T ss_pred HHCCCEEECCceEEEEEEE----CCEEEEEEEC-Cc---EEEC-CEEEECcchh-HHHHHHHcCCC
Confidence 3467999999999999876 2467676542 33 5778 7899999976 44455444543
No 49
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=90.97 E-value=1.2 Score=33.19 Aligned_cols=57 Identities=7% Similarity=0.127 Sum_probs=43.2
Q ss_pred hhcCCCeEEEccceEEEEEeccCCCCCeEEEEEEEe--CCeEEEEEeceEEEecCCcccCCchhh
Q psy8943 23 IRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILR--DGRKHIIRAKKEIISSAGAINSPQLLM 85 (134)
Q Consensus 23 ~~~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~--~g~~~~~~a~~~vIlaaGai~tP~lLl 85 (134)
+....+++|++++.|++|.-+ +++.+|.+.+ +|....+.+ +.||+|.|..-++.+|.
T Consensus 197 l~~~~gv~i~~~~~v~~i~~~-----~~v~~v~~~~~~~g~~~~i~~-D~vi~a~G~~p~~~~l~ 255 (325)
T 2q7v_A 197 AFANPKMKFIWDTAVEEIQGA-----DSVSGVKLRNLKTGEVSELAT-DGVFIFIGHVPNTAFVK 255 (325)
T ss_dssp HHTCTTEEEECSEEEEEEEES-----SSEEEEEEEETTTCCEEEEEC-SEEEECSCEEESCGGGT
T ss_pred HHhcCCceEecCCceEEEccC-----CcEEEEEEEECCCCcEEEEEc-CEEEEccCCCCChHHHh
Confidence 334568999999999998643 4677888875 676667777 69999999776655554
No 50
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=90.88 E-value=1.5 Score=32.36 Aligned_cols=61 Identities=8% Similarity=0.010 Sum_probs=45.3
Q ss_pred hhcCCCeEEEccceEEEEEeccCCCCCeEEEEEEEe--CCeEEEEEeceEEEecCCcccCCchhhhcc
Q psy8943 23 IRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILR--DGRKHIIRAKKEIISSAGAINSPQLLMVSG 88 (134)
Q Consensus 23 ~~~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~--~g~~~~~~a~~~vIlaaGai~tP~lLl~SG 88 (134)
+....++++++++.|++|.-+ ++++.+|.+.. +|....+.+ +.||+|.|..-...+|..+|
T Consensus 188 l~~~~gv~v~~~~~v~~i~~~----~~~v~~v~~~~~~~g~~~~i~~-D~vi~a~G~~p~~~~l~~~g 250 (311)
T 2q0l_A 188 AKNNDKIEFLTPYVVEEIKGD----ASGVSSLSIKNTATNEKRELVV-PGFFIFVGYDVNNAVLKQED 250 (311)
T ss_dssp HHTCTTEEEETTEEEEEEEEE----TTEEEEEEEEETTTCCEEEEEC-SEEEECSCEEECCGGGBCTT
T ss_pred HhhCCCeEEEeCCEEEEEECC----CCcEeEEEEEecCCCceEEEec-CEEEEEecCccChhhhhccc
Confidence 334568999999999998654 24677888875 676667777 69999999876666665554
No 51
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=90.73 E-value=0.98 Score=33.50 Aligned_cols=56 Identities=7% Similarity=0.092 Sum_probs=42.4
Q ss_pred cCCCeEEEccceEEEEEeccCCCCCeEEEEEEEe--C-CeEEEEEeceEEEecCCcccCCchhh
Q psy8943 25 LRKNLHIAMETQALRLLFDKSGPVPKAVGIEILR--D-GRKHIIRAKKEIISSAGAINSPQLLM 85 (134)
Q Consensus 25 ~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~--~-g~~~~~~a~~~vIlaaGai~tP~lLl 85 (134)
.+.++++++++.|++|.-+ ++++.+|.+.+ + |....+.+ +.||+|.|..-.+.+|.
T Consensus 195 ~~~gv~i~~~~~v~~i~~~----~~~v~~v~~~~~~~~g~~~~i~~-D~vv~a~G~~p~~~~~~ 253 (320)
T 1trb_A 195 ENGNIILHTNRTLEEVTGD----QMGVTGVRLRDTQNSDNIESLDV-AGLFVAIGHSPNTAIFE 253 (320)
T ss_dssp HTSSEEEECSCEEEEEEEC----SSSEEEEEEECCTTCCCCEEEEC-SEEEECSCEEESCGGGT
T ss_pred ccCCeEEEcCceeEEEEcC----CCceEEEEEEeccCCCceEEEEc-CEEEEEeCCCCChHHhc
Confidence 4578999999999999754 24788888875 2 55556777 68999999776666554
No 52
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=90.67 E-value=0.36 Score=38.60 Aligned_cols=50 Identities=12% Similarity=0.294 Sum_probs=38.3
Q ss_pred cCCCeEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcccCCc
Q psy8943 25 LRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQ 82 (134)
Q Consensus 25 ~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai~tP~ 82 (134)
...+++|++++.|++|..+ ++++.+|.+. +|. .+++ +.||+|+|+...|.
T Consensus 145 ~~~GV~i~~~~~V~~i~~~----~~~v~~V~~~-~G~--~i~A-d~VVlAtGg~s~~~ 194 (447)
T 2i0z_A 145 KDLGVKIRTNTPVETIEYE----NGQTKAVILQ-TGE--VLET-NHVVIAVGGKSVPQ 194 (447)
T ss_dssp HHTTCEEECSCCEEEEEEE----TTEEEEEEET-TCC--EEEC-SCEEECCCCSSSGG
T ss_pred HHCCCEEEeCcEEEEEEec----CCcEEEEEEC-CCC--EEEC-CEEEECCCCCcCCC
Confidence 3468999999999999876 3466777754 453 4778 79999999887653
No 53
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=90.52 E-value=0.22 Score=39.39 Aligned_cols=59 Identities=15% Similarity=0.169 Sum_probs=39.0
Q ss_pred cCCCeEEEccceEEEEEecc----------CC-CCCeEEEEEEEeCCeEEEE--EeceEEEecCCcccCCchhhhccc
Q psy8943 25 LRKNLHIAMETQALRLLFDK----------SG-PVPKAVGIEILRDGRKHII--RAKKEIISSAGAINSPQLLMVSGG 89 (134)
Q Consensus 25 ~~~nl~i~t~~~V~ri~~~~----------~~-~~~~a~gV~~~~~g~~~~~--~a~~~vIlaaGai~tP~lLl~SGi 89 (134)
.+.+++|++++.|++|..+. .. +++++.+|... +| .+ .+ +.||+|+|+. ++.|+...|+
T Consensus 192 ~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~-~g---~i~~~A-d~VV~AtG~~-s~~l~~~~g~ 263 (448)
T 3axb_A 192 SGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLS-DG---TRVEVG-EKLVVAAGVW-SNRLLNPLGI 263 (448)
T ss_dssp HHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEET-TS---CEEEEE-EEEEECCGGG-HHHHHGGGTC
T ss_pred HhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeC-CC---EEeecC-CEEEECCCcC-HHHHHHHcCC
Confidence 34679999999999998720 00 12356566532 44 46 77 7999999986 5666655554
No 54
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=90.18 E-value=1.2 Score=33.93 Aligned_cols=61 Identities=13% Similarity=0.098 Sum_probs=44.1
Q ss_pred cCCCeEEEccceEEEEEeccCCCCCeEEEEEEEe-CCeEEEEEeceEEEecCCcccCCchhhhcccc
Q psy8943 25 LRKNLHIAMETQALRLLFDKSGPVPKAVGIEILR-DGRKHIIRAKKEIISSAGAINSPQLLMVSGGS 90 (134)
Q Consensus 25 ~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~-~g~~~~~~a~~~vIlaaGai~tP~lLl~SGig 90 (134)
.+.++++++++.|++|.-+ ++++.+|.+.. +|....+.+ +.||+|.|..-.+.+|..+|+.
T Consensus 213 ~~~gv~i~~~~~v~~i~~~----~~~v~~v~~~~~~g~~~~i~~-D~vi~a~G~~p~~~~l~~~~~~ 274 (360)
T 3ab1_A 213 ANGTIDVYLETEVASIEES----NGVLTRVHLRSSDGSKWTVEA-DRLLILIGFKSNLGPLARWDLE 274 (360)
T ss_dssp HHTSEEEESSEEEEEEEEE----TTEEEEEEEEETTCCEEEEEC-SEEEECCCBCCSCGGGGGSSCC
T ss_pred hcCceEEEcCcCHHHhccC----CCceEEEEEEecCCCeEEEeC-CEEEECCCCCCCHHHHHhhccc
Confidence 3457999999999999765 35777888763 565566777 7999999965555566555543
No 55
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=89.88 E-value=0.62 Score=39.05 Aligned_cols=53 Identities=17% Similarity=0.264 Sum_probs=40.8
Q ss_pred hhhhhcCCCeEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCc
Q psy8943 20 LRPIRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGA 77 (134)
Q Consensus 20 l~~~~~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGa 77 (134)
|...+...+++|+.++.|+.|..+ ++.+.+|.+.++|....+.+ +.||.|.|.
T Consensus 134 L~~~a~~~Gv~i~~g~~V~~v~~~----~g~~~~V~~~~~G~~~~i~A-dlVV~AdG~ 186 (591)
T 3i3l_A 134 LLDEARSRGITVHEETPVTDVDLS----DPDRVVLTVRRGGESVTVES-DFVIDAGGS 186 (591)
T ss_dssp HHHHHHHTTCEEETTCCEEEEECC----STTCEEEEEEETTEEEEEEE-SEEEECCGG
T ss_pred HHHHHHhCCCEEEeCCEEEEEEEc----CCCEEEEEEecCCceEEEEc-CEEEECCCC
Confidence 333334578999999999999876 24567788777777778888 799999997
No 56
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=89.70 E-value=0.63 Score=37.74 Aligned_cols=54 Identities=19% Similarity=0.184 Sum_probs=41.0
Q ss_pred cCCCeEEEccceEEEEEeccCCCCCeEEEEEEEe--CCeEEEEEeceEEEecCCcccCCchhh
Q psy8943 25 LRKNLHIAMETQALRLLFDKSGPVPKAVGIEILR--DGRKHIIRAKKEIISSAGAINSPQLLM 85 (134)
Q Consensus 25 ~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~--~g~~~~~~a~~~vIlaaGai~tP~lLl 85 (134)
...+++|+.++.|+.|..+ +.+.+|.+.+ +|....+++ +.||+|+|+. +..++.
T Consensus 160 ~~~Gv~i~~~~~V~~l~~~-----~~~~~V~~~d~~~G~~~~i~A-~~VV~AtG~~-s~~l~~ 215 (501)
T 2qcu_A 160 VRKGGEVLTRTRATSARRE-----NGLWIVEAEDIDTGKKYSWQA-RGLVNATGPW-VKQFFD 215 (501)
T ss_dssp HHTTCEEECSEEEEEEEEE-----TTEEEEEEEETTTCCEEEEEE-SCEEECCGGG-HHHHHH
T ss_pred HHcCCEEEcCcEEEEEEEe-----CCEEEEEEEECCCCCEEEEEC-CEEEECCChh-HHHHHH
Confidence 3457999999999999876 2577888765 576667888 7999999976 444443
No 57
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=89.10 E-value=1.1 Score=33.82 Aligned_cols=54 Identities=20% Similarity=0.300 Sum_probs=41.1
Q ss_pred hhhhhhcCCCeEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCc
Q psy8943 19 FLRPIRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGA 77 (134)
Q Consensus 19 ~l~~~~~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGa 77 (134)
+|...+...+++++.++.|+.+..+ +++++++....++....+++ +.||.|-|+
T Consensus 107 ~L~~~a~~~G~~~~~~~~v~~~~~~----~~~~~~v~~~~~~~~~~~~a-~~vIgAdG~ 160 (397)
T 3oz2_A 107 HLAALAAKAGADVWVKSPALGVIKE----NGKVAGAKIRHNNEIVDVRA-KMVIAADGF 160 (397)
T ss_dssp HHHHHHHHHTCEEESSCCEEEEEEE----TTEEEEEEEEETTEEEEEEE-EEEEECCCT
T ss_pred HHHHHHHhcCcEEeeeeeeeeeeec----cceeeeeeecccccceEEEE-eEEEeCCcc
Confidence 3333334567999999999999877 46888888888888888888 677777664
No 58
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=88.88 E-value=2.8 Score=31.19 Aligned_cols=63 Identities=10% Similarity=0.123 Sum_probs=45.4
Q ss_pred hhcCCCeEEEccceEEEEEeccCCCCCeEEEEEEEe--CCeEEEEEeceEEEecCCcccCCchhhhccc
Q psy8943 23 IRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILR--DGRKHIIRAKKEIISSAGAINSPQLLMVSGG 89 (134)
Q Consensus 23 ~~~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~--~g~~~~~~a~~~vIlaaGai~tP~lLl~SGi 89 (134)
+....++++++++.|++|.-+. +..++.+|.+.+ +|....+.+ +.||+|.|..-...+|. +|+
T Consensus 204 ~~~~~gv~i~~~~~v~~i~~~~--~~~~v~~v~~~~~~~g~~~~i~~-D~vi~a~G~~p~~~~~~-~~l 268 (333)
T 1vdc_A 204 ALSNPKIDVIWNSSVVEAYGDG--ERDVLGGLKVKNVVTGDVSDLKV-SGLFFAIGHEPATKFLD-GGV 268 (333)
T ss_dssp HHTCTTEEEECSEEEEEEEESS--SSSSEEEEEEEETTTCCEEEEEC-SEEEECSCEEESCGGGT-TSS
T ss_pred HHhCCCeeEecCCceEEEeCCC--CccceeeEEEEecCCCceEEEec-CEEEEEeCCccchHHhh-ccc
Confidence 3456789999999999997542 111678888876 566667777 79999999876666554 343
No 59
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=87.60 E-value=0.83 Score=38.04 Aligned_cols=52 Identities=21% Similarity=0.193 Sum_probs=39.0
Q ss_pred cCCCeEEEccceEEEEEeccCCCCCeEEEEEEEe-----CCeE-------EEEEeceEEEecCCcccC
Q psy8943 25 LRKNLHIAMETQALRLLFDKSGPVPKAVGIEILR-----DGRK-------HIIRAKKEIISSAGAINS 80 (134)
Q Consensus 25 ~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~-----~g~~-------~~~~a~~~vIlaaGai~t 80 (134)
...+++|+.++.|+.|..+. ++++.+|.+.+ +|.. ..+++ +.||+|.|+-..
T Consensus 155 ~~~Gv~i~~g~~v~~l~~~~---~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~A-d~VV~AdG~~S~ 218 (584)
T 2gmh_A 155 EALGVEVYPGYAAAEILFHE---DGSVKGIATNDVGIQKDGAPKTTFERGLELHA-KVTIFAEGCHGH 218 (584)
T ss_dssp HHTTCEEETTCCEEEEEECT---TSSEEEEEECCEEECTTSCEEEEEECCCEEEC-SEEEECCCTTCH
T ss_pred HHcCCEEEcCCEEEEEEEcC---CCCEEEEEeCCccccCCCCcccccCCceEEEC-CEEEEeeCCCch
Confidence 34589999999999998862 35788888763 4432 46778 799999998644
No 60
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=87.56 E-value=1.7 Score=35.36 Aligned_cols=64 Identities=13% Similarity=0.130 Sum_probs=43.1
Q ss_pred hhhcCCCeEEEccceEEEEEeccCCCCCeEEEEEEEe-CCeEEEEEeceEEEecCCcccCCc-hhhhcccc
Q psy8943 22 PIRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILR-DGRKHIIRAKKEIISSAGAINSPQ-LLMVSGGS 90 (134)
Q Consensus 22 ~~~~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~-~g~~~~~~a~~~vIlaaGai~tP~-lLl~SGig 90 (134)
..+...+++|++++.|++|.-+ ++++++++.+.. +|. ..+.+ +.||+|+|..-+.. +|...|+.
T Consensus 263 ~~l~~~GV~i~~~~~V~~i~~~---~~~~v~~~~v~~~~G~-~~i~a-D~Vv~A~G~~p~~~~~l~~~gl~ 328 (523)
T 1mo9_A 263 DRMKEQGMEIISGSNVTRIEED---ANGRVQAVVAMTPNGE-MRIET-DFVFLGLGEQPRSAELAKILGLD 328 (523)
T ss_dssp HHHHHTTCEEESSCEEEEEEEC---TTSBEEEEEEEETTEE-EEEEC-SCEEECCCCEECCHHHHHHHTCC
T ss_pred HHHHhCCcEEEECCEEEEEEEc---CCCceEEEEEEECCCc-EEEEc-CEEEECcCCccCCccCHHHcCCc
Confidence 3344568999999999999754 234665565554 443 35777 79999999876655 55555553
No 61
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=87.46 E-value=1.1 Score=35.21 Aligned_cols=63 Identities=19% Similarity=0.257 Sum_probs=45.4
Q ss_pred hhhhhcCCCeEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcccCCchhhhcccc
Q psy8943 20 LRPIRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQLLMVSGGS 90 (134)
Q Consensus 20 l~~~~~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai~tP~lLl~SGig 90 (134)
+.......+++|++++.|++|.-+ ++++++|.+. +|. .+.+ +.||+|.|..-...+|..+|+.
T Consensus 200 l~~~l~~~GV~i~~~~~v~~i~~~----~~~v~~v~l~-dG~--~i~a-D~Vv~a~G~~p~~~l~~~~gl~ 262 (415)
T 3lxd_A 200 YQAEHRAHGVDLRTGAAMDCIEGD----GTKVTGVRMQ-DGS--VIPA-DIVIVGIGIVPCVGALISAGAS 262 (415)
T ss_dssp HHHHHHHTTCEEEETCCEEEEEES----SSBEEEEEES-SSC--EEEC-SEEEECSCCEESCHHHHHTTCC
T ss_pred HHHHHHhCCCEEEECCEEEEEEec----CCcEEEEEeC-CCC--EEEc-CEEEECCCCccChHHHHhCCCC
Confidence 333344568999999999999765 3578788765 443 4566 7999999987776676666654
No 62
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=87.24 E-value=2.8 Score=31.22 Aligned_cols=62 Identities=13% Similarity=0.063 Sum_probs=44.6
Q ss_pred hhcCCCeEEEccceEEEEEeccCCCCCeEEEEEEEe--CCeEEEEEeceEEEecCCcccCCchhhhcccc
Q psy8943 23 IRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILR--DGRKHIIRAKKEIISSAGAINSPQLLMVSGGS 90 (134)
Q Consensus 23 ~~~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~--~g~~~~~~a~~~vIlaaGai~tP~lLl~SGig 90 (134)
.+...++++++++.|.+|.-+ +++.+|.+.. +|....+.+ +.||+|.|..-...+|..+|+.
T Consensus 200 ~l~~~gv~v~~~~~v~~i~~~-----~~~~~v~~~~~~~g~~~~i~~-D~vi~a~G~~p~~~~l~~~~~~ 263 (335)
T 2zbw_A 200 AHEEGRLEVLTPYELRRVEGD-----ERVRWAVVFHNQTQEELALEV-DAVLILAGYITKLGPLANWGLA 263 (335)
T ss_dssp HHHTTSSEEETTEEEEEEEES-----SSEEEEEEEETTTCCEEEEEC-SEEEECCCEEEECGGGGGSCCC
T ss_pred ccccCCeEEecCCcceeEccC-----CCeeEEEEEECCCCceEEEec-CEEEEeecCCCCchHhhhccee
Confidence 344568999999999998643 4577788774 565556777 7999999976555566555554
No 63
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=87.24 E-value=1 Score=35.30 Aligned_cols=61 Identities=11% Similarity=0.236 Sum_probs=44.7
Q ss_pred hhhcCCCeEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcccCCchhhhcccc
Q psy8943 22 PIRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQLLMVSGGS 90 (134)
Q Consensus 22 ~~~~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai~tP~lLl~SGig 90 (134)
......++++++++.|++|.-+ ++++.+|.+. +|. .+.+ +.||+|.|..-+..++..+|+.
T Consensus 192 ~~l~~~GV~i~~~~~v~~i~~~----~~~v~~V~~~-dG~--~i~a-D~Vv~a~G~~p~~~l~~~~gl~ 252 (404)
T 3fg2_P 192 DRHSGAGIRMHYGVRATEIAAE----GDRVTGVVLS-DGN--TLPC-DLVVVGVGVIPNVEIAAAAGLP 252 (404)
T ss_dssp HHHHHTTCEEECSCCEEEEEEE----TTEEEEEEET-TSC--EEEC-SEEEECCCEEECCHHHHHTTCC
T ss_pred HHHHhCCcEEEECCEEEEEEec----CCcEEEEEeC-CCC--EEEc-CEEEECcCCccCHHHHHhCCCC
Confidence 3345578999999999999765 3577777765 443 4566 7999999987766677666654
No 64
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=87.13 E-value=0.76 Score=35.33 Aligned_cols=55 Identities=18% Similarity=0.213 Sum_probs=38.2
Q ss_pred cCCCeEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcccCCchhhhccc
Q psy8943 25 LRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQLLMVSGG 89 (134)
Q Consensus 25 ~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai~tP~lLl~SGi 89 (134)
...+++|+.++.|++|..+ ++++.+|... ++ .+.+ +.||+|+|+. ++.++...|+
T Consensus 185 ~~~g~~i~~~~~v~~i~~~----~~~~~~v~~~-~g---~~~a-~~vV~a~G~~-s~~l~~~~g~ 239 (405)
T 2gag_B 185 NEMGVDIIQNCEVTGFIKD----GEKVTGVKTT-RG---TIHA-GKVALAGAGH-SSVLAEMAGF 239 (405)
T ss_dssp HHTTCEEECSCCEEEEEES----SSBEEEEEET-TC---CEEE-EEEEECCGGG-HHHHHHHHTC
T ss_pred HHCCCEEEcCCeEEEEEEe----CCEEEEEEeC-Cc---eEEC-CEEEECCchh-HHHHHHHcCC
Confidence 3468999999999999876 2466666543 44 4677 7899999975 3345444444
No 65
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=86.47 E-value=0.9 Score=38.25 Aligned_cols=54 Identities=9% Similarity=0.023 Sum_probs=36.4
Q ss_pred cCCCeEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcccCCchhhhcc
Q psy8943 25 LRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQLLMVSG 88 (134)
Q Consensus 25 ~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai~tP~lLl~SG 88 (134)
.+.+++|++++.|++|..+. +.+ +|... +|. .+.+ +.||+|+|+. ++.++...+
T Consensus 428 ~~~Gv~i~~~t~V~~l~~~~----~~v-~V~t~-~G~--~i~A-d~VVlAtG~~-s~~l~~~~~ 481 (676)
T 3ps9_A 428 QQQGLQIYYQYQLQNFSRKD----DCW-LLNFA-GDQ--QATH-SVVVLANGHQ-ISRFSQTST 481 (676)
T ss_dssp HHTTCEEEESCCEEEEEEET----TEE-EEEET-TSC--EEEE-SEEEECCGGG-GGCSTTTTT
T ss_pred HhCCCEEEeCCeeeEEEEeC----CeE-EEEEC-CCC--EEEC-CEEEECCCcc-hhccccccC
Confidence 34579999999999998772 332 33322 433 3677 7899999986 565554443
No 66
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=86.45 E-value=3.3 Score=33.78 Aligned_cols=54 Identities=26% Similarity=0.342 Sum_probs=42.0
Q ss_pred CCeEEEccceEEEEEeccCCCCCeEEEEEEEe--CCeEEEEEeceEEEecCCcccCCchhh
Q psy8943 27 KNLHIAMETQALRLLFDKSGPVPKAVGIEILR--DGRKHIIRAKKEIISSAGAINSPQLLM 85 (134)
Q Consensus 27 ~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~--~g~~~~~~a~~~vIlaaGai~tP~lLl 85 (134)
+++++++++.|++|.-+ ++++++|.+.+ +|....+.+ +.||+|.|..-+..+|.
T Consensus 404 ~gV~v~~~~~v~~i~~~----~~~v~~v~~~~~~~g~~~~i~~-D~vi~a~G~~pn~~~l~ 459 (521)
T 1hyu_A 404 KNVDIILNAQTTEVKGD----GSKVVGLEYRDRVSGDIHSVAL-AGIFVQIGLLPNTHWLE 459 (521)
T ss_dssp TTEEEECSEEEEEEEEC----SSSEEEEEEEETTTCCEEEEEC-SEEEECCCEEESCGGGT
T ss_pred CCcEEEeCCEEEEEEcC----CCcEEEEEEEeCCCCceEEEEc-CEEEECcCCCCCchHHh
Confidence 69999999999998643 35788999886 566667777 68999999765555553
No 67
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=85.95 E-value=1.2 Score=34.40 Aligned_cols=53 Identities=17% Similarity=0.229 Sum_probs=34.8
Q ss_pred cCCCeEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcccCCchhhhcc
Q psy8943 25 LRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQLLMVSG 88 (134)
Q Consensus 25 ~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai~tP~lLl~SG 88 (134)
...+++|++++.|++|..+. +. |.+..++. .+.+ +.||+|+|+. ++.++...|
T Consensus 164 ~~~Gv~i~~~~~V~~i~~~~----~~---v~v~t~~g--~i~a-~~VV~A~G~~-s~~l~~~~g 216 (397)
T 2oln_A 164 QAAGATLRAGETVTELVPDA----DG---VSVTTDRG--TYRA-GKVVLACGPY-TNDLLEPLG 216 (397)
T ss_dssp HHTTCEEEESCCEEEEEEET----TE---EEEEESSC--EEEE-EEEEECCGGG-HHHHHGGGT
T ss_pred HHcCCEEECCCEEEEEEEcC----Ce---EEEEECCC--EEEc-CEEEEcCCcC-hHHHhhhcC
Confidence 34579999999999998752 23 33333332 5778 7899999985 344443333
No 68
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=85.52 E-value=1.4 Score=32.92 Aligned_cols=64 Identities=20% Similarity=0.204 Sum_probs=41.2
Q ss_pred hhhhhhhcCCCeEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcccCCchhhhcccc
Q psy8943 18 AFLRPIRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQLLMVSGGS 90 (134)
Q Consensus 18 ~~l~~~~~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai~tP~lLl~SGig 90 (134)
.++.......++++..++.|+.|..+. +...+| ..++. .+.+ +.+|+|.|+...|.+....|..
T Consensus 80 ~~l~~~~~~~~~~~~~~~~v~~i~~~~----~~~~~v--~~~~g--~~~~-d~vV~AtG~~~~~~~~~~~g~~ 143 (357)
T 4a9w_A 80 AYLAQYEQKYALPVLRPIRVQRVSHFG----ERLRVV--ARDGR--QWLA-RAVISATGTWGEAYTPEYQGLE 143 (357)
T ss_dssp HHHHHHHHHTTCCEECSCCEEEEEEET----TEEEEE--ETTSC--EEEE-EEEEECCCSGGGBCCCCCTTGG
T ss_pred HHHHHHHHHcCCEEEcCCEEEEEEECC----CcEEEE--EeCCC--EEEe-CEEEECCCCCCCCCCCCCCCcc
Confidence 344444445678999999999998762 232223 33222 5677 7999999987777665554543
No 69
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=85.37 E-value=2.1 Score=32.60 Aligned_cols=53 Identities=17% Similarity=0.168 Sum_probs=35.1
Q ss_pred cCCCeEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcccCCchhhhcc
Q psy8943 25 LRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQLLMVSG 88 (134)
Q Consensus 25 ~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai~tP~lLl~SG 88 (134)
.+.+++|+.++.|++|..+. +. +.+..++. .+.+ +.||+|+|+. ++.++...|
T Consensus 161 ~~~Gv~i~~~~~v~~i~~~~----~~---~~v~~~~g--~~~a-~~vV~A~G~~-~~~l~~~~g 213 (389)
T 2gf3_A 161 EARGAKVLTHTRVEDFDISP----DS---VKIETANG--SYTA-DKLIVSMGAW-NSKLLSKLN 213 (389)
T ss_dssp HHTTCEEECSCCEEEEEECS----SC---EEEEETTE--EEEE-EEEEECCGGG-HHHHGGGGT
T ss_pred HHCCCEEEcCcEEEEEEecC----Ce---EEEEeCCC--EEEe-CEEEEecCcc-HHHHhhhhc
Confidence 34579999999999998752 22 23333333 4777 7999999974 445544333
No 70
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=85.32 E-value=2.8 Score=30.97 Aligned_cols=61 Identities=15% Similarity=0.148 Sum_probs=45.2
Q ss_pred cCCCeEEEccceEEEEEeccCCCCCeEEEEEEEe--CCeEEEEEeceEEEecCCcccCCchhhhccccc
Q psy8943 25 LRKNLHIAMETQALRLLFDKSGPVPKAVGIEILR--DGRKHIIRAKKEIISSAGAINSPQLLMVSGGSS 91 (134)
Q Consensus 25 ~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~--~g~~~~~~a~~~vIlaaGai~tP~lLl~SGig~ 91 (134)
...++++++++.|.+|.-+ +.+.+|.+.+ ++....+.+ +.||+|.|..-.+.+|..+|+..
T Consensus 200 ~~~gv~~~~~~~v~~i~~~-----~~~~~v~~~~~~~g~~~~~~~-D~vv~a~G~~p~~~~~~~~~~~~ 262 (332)
T 3lzw_A 200 HASKVNVLTPFVPAELIGE-----DKIEQLVLEEVKGDRKEILEI-DDLIVNYGFVSSLGPIKNWGLDI 262 (332)
T ss_dssp HHSSCEEETTEEEEEEECS-----SSCCEEEEEETTSCCEEEEEC-SEEEECCCEECCCGGGGGSSCCE
T ss_pred hcCCeEEEeCceeeEEecC-----CceEEEEEEecCCCceEEEEC-CEEEEeeccCCCchHHhhcCccc
Confidence 3568999999999998654 2256777776 455566777 79999999877777777676653
No 71
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=84.88 E-value=2 Score=33.19 Aligned_cols=47 Identities=23% Similarity=0.292 Sum_probs=34.3
Q ss_pred CCCeEEEccceEEEEEeccCCCCCeEEEEEEEe-CCeEEEEEeceEEEecCCcc
Q psy8943 26 RKNLHIAMETQALRLLFDKSGPVPKAVGIEILR-DGRKHIIRAKKEIISSAGAI 78 (134)
Q Consensus 26 ~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~-~g~~~~~~a~~~vIlaaGai 78 (134)
+.+++|+.++.|+.|..+. ++.. |.+.. +|....+.+ +.||.|.|.-
T Consensus 118 ~~gv~i~~~~~v~~i~~~~---~~~~--v~v~~~~g~~~~~~a-~~vV~A~G~~ 165 (421)
T 3nix_A 118 RQGVDVEYEVGVTDIKFFG---TDSV--TTIEDINGNKREIEA-RFIIDASGYG 165 (421)
T ss_dssp HHTCEEECSEEEEEEEEET---TEEE--EEEEETTSCEEEEEE-EEEEECCGGG
T ss_pred hCCCEEEcCCEEEEEEEeC---CEEE--EEEEcCCCCEEEEEc-CEEEECCCCc
Confidence 3489999999999998762 2222 44443 677677888 7999999854
No 72
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=84.69 E-value=4.1 Score=31.76 Aligned_cols=56 Identities=14% Similarity=0.090 Sum_probs=37.2
Q ss_pred hhcCCCeEEEccceEEEEEeccCCCCC--eEEEEEEEe-----CC------eEEEEEe--------------ceEEEecC
Q psy8943 23 IRLRKNLHIAMETQALRLLFDKSGPVP--KAVGIEILR-----DG------RKHIIRA--------------KKEIISSA 75 (134)
Q Consensus 23 ~~~~~nl~i~t~~~V~ri~~~~~~~~~--~a~gV~~~~-----~g------~~~~~~a--------------~~~vIlaa 75 (134)
+.+.+|++|+.++.|+.|+.+...+.+ +++||.+.. ++ ....+.+ .+.||.|.
T Consensus 156 a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv~~~~v~~~g~~~~~~d~~~I~A~G~~~~~~~~~~~~~~~VV~AT 235 (326)
T 2gjc_A 156 VLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCCMDPNVIELAGYKNDGTRDLSQKHGVILSTT 235 (326)
T ss_dssp HHTSTTEEEETTEEEEEEEECCCC-----CEEEEEEEEHHHHTC---CCCCCCEEEEESCCCSSSCCCSSTTCCEEEECC
T ss_pred HHHhcCcEEEecceeeeeeecccccCCCcEEEEEEecceeecccccceeccCceEEEEeeccccccccccccCCEEEECc
Confidence 444579999999999999887321114 899997742 22 2345666 36888888
Q ss_pred Ccc
Q psy8943 76 GAI 78 (134)
Q Consensus 76 Gai 78 (134)
|.-
T Consensus 236 G~~ 238 (326)
T 2gjc_A 236 GHD 238 (326)
T ss_dssp CCC
T ss_pred CCC
Confidence 853
No 73
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=84.38 E-value=0.83 Score=35.69 Aligned_cols=50 Identities=16% Similarity=0.195 Sum_probs=37.2
Q ss_pred cCCCeEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcccCCchhh
Q psy8943 25 LRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQLLM 85 (134)
Q Consensus 25 ~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai~tP~lLl 85 (134)
...+.+|.+++.|++|..+ ++++ | ..++. .+.+ +.||+|+|+-..++||-
T Consensus 200 ~~~G~~i~~~~~V~~i~~~----~~~v--V--~~~g~--~~~a-d~Vv~a~~~~~~~~ll~ 249 (421)
T 3nrn_A 200 MENKGKILTRKEVVEINIE----EKKV--Y--TRDNE--EYSF-DVAISNVGVRETVKLIG 249 (421)
T ss_dssp HTTTCEEESSCCEEEEETT----TTEE--E--ETTCC--EEEC-SEEEECSCHHHHHHHHC
T ss_pred HHCCCEEEcCCeEEEEEEE----CCEE--E--EeCCc--EEEe-CEEEECCCHHHHHHhcC
Confidence 4557999999999999876 2444 3 34553 4677 79999999988777664
No 74
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=84.25 E-value=1.2 Score=37.72 Aligned_cols=54 Identities=9% Similarity=0.061 Sum_probs=35.9
Q ss_pred cCCCeEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcccCCchhhhc
Q psy8943 25 LRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQLLMVS 87 (134)
Q Consensus 25 ~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai~tP~lLl~S 87 (134)
.+.+++|++++.|++|..+. +.+ .|... +|. ..+.+ +.||+|+|+. ++.++...
T Consensus 423 ~~~Gv~i~~~t~V~~l~~~~----~~v-~V~t~-~G~-~~i~A-d~VVlAtG~~-s~~l~~~~ 476 (689)
T 3pvc_A 423 QQNGMTCHYQHELQRLKRID----SQW-QLTFG-QSQ-AAKHH-ATVILATGHR-LPEWEQTH 476 (689)
T ss_dssp HHTTCEEEESCCEEEEEECS----SSE-EEEEC--CC-CCEEE-SEEEECCGGG-TTCSTTTT
T ss_pred HhCCCEEEeCCeEeEEEEeC----CeE-EEEeC-CCc-EEEEC-CEEEECCCcc-hhcccccc
Confidence 34579999999999998763 232 33332 332 13667 7999999987 66665544
No 75
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=83.56 E-value=3.7 Score=32.27 Aligned_cols=57 Identities=21% Similarity=0.198 Sum_probs=40.2
Q ss_pred hhcCCCeEEEccceEEEEEeccCC-------------CCC--eEEEEEEEe-----CC------eEEEEEeceEEEecCC
Q psy8943 23 IRLRKNLHIAMETQALRLLFDKSG-------------PVP--KAVGIEILR-----DG------RKHIIRAKKEIISSAG 76 (134)
Q Consensus 23 ~~~~~nl~i~t~~~V~ri~~~~~~-------------~~~--~a~gV~~~~-----~g------~~~~~~a~~~vIlaaG 76 (134)
+...++++|+.++.|+.|+.+..+ ..+ ++.||.+.. ++ ....+++ +.||+|.|
T Consensus 170 a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~~~v~~~g~~~~~~d~~~i~A-k~VV~ATG 248 (344)
T 3jsk_A 170 VLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLVSMHHDDQSAMDPNTINA-PVIISTTG 248 (344)
T ss_dssp HHTCTTEEEEETEEEEEEEEEEC----------------CCEEEEEEEEEEHHHHTTSSSSSCCBCEEEEC-SEEEECCC
T ss_pred HHhCCCCEEEeCCEEEEEEecCCcccccccccccccccCCCceEeEEEeeeeeeeccCCcccccCceEEEc-CEEEECCC
Confidence 444579999999999999887410 012 889997742 22 3467888 79999999
Q ss_pred cccC
Q psy8943 77 AINS 80 (134)
Q Consensus 77 ai~t 80 (134)
.-..
T Consensus 249 ~~s~ 252 (344)
T 3jsk_A 249 HDGP 252 (344)
T ss_dssp SSSS
T ss_pred CCch
Confidence 7543
No 76
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=83.51 E-value=0.77 Score=35.09 Aligned_cols=53 Identities=17% Similarity=0.097 Sum_probs=36.2
Q ss_pred cCCCeEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcccCCchhhhcc
Q psy8943 25 LRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQLLMVSG 88 (134)
Q Consensus 25 ~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai~tP~lLl~SG 88 (134)
...+++|+.++.|++|..+. +.+ +|.. .+. .+.+ +.||+|+|+. ++.++...|
T Consensus 175 ~~~g~~i~~~~~v~~i~~~~----~~~-~v~~--~~g--~~~a-~~vV~A~G~~-s~~l~~~~~ 227 (382)
T 1ryi_A 175 KMLGAEIFEHTPVLHVERDG----EAL-FIKT--PSG--DVWA-NHVVVASGVW-SGMFFKQLG 227 (382)
T ss_dssp HHTTCEEETTCCCCEEECSS----SSE-EEEE--TTE--EEEE-EEEEECCGGG-THHHHHHTT
T ss_pred HHCCCEEEcCCcEEEEEEEC----CEE-EEEc--CCc--eEEc-CEEEECCChh-HHHHHHhcC
Confidence 34579999999999997762 344 4432 222 5777 7999999985 555554444
No 77
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=83.07 E-value=2.2 Score=34.02 Aligned_cols=48 Identities=13% Similarity=0.265 Sum_probs=34.8
Q ss_pred cCCCeEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcccCCc
Q psy8943 25 LRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQ 82 (134)
Q Consensus 25 ~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai~tP~ 82 (134)
.+.+++|++++.|++|..+. + ++.+...+. .+.+ +.||+|+|+...|+
T Consensus 143 ~~~Gv~i~~~~~V~~i~~~~----~---~~~V~~~~g--~i~a-d~VIlAtG~~S~p~ 190 (417)
T 3v76_A 143 KEAGVQLRLETSIGEVERTA----S---GFRVTTSAG--TVDA-ASLVVASGGKSIPK 190 (417)
T ss_dssp HHHTCEEECSCCEEEEEEET----T---EEEEEETTE--EEEE-SEEEECCCCSSCGG
T ss_pred HHCCCEEEECCEEEEEEEeC----C---EEEEEECCc--EEEe-eEEEECCCCccCCC
Confidence 34589999999999998762 2 244444333 5778 79999999987665
No 78
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=82.94 E-value=2.1 Score=30.81 Aligned_cols=49 Identities=22% Similarity=0.449 Sum_probs=35.0
Q ss_pred CCCeEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcccCCch
Q psy8943 26 RKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQL 83 (134)
Q Consensus 26 ~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai~tP~l 83 (134)
.++++++ ++.|+.|..+ ++++.+|... +|. .+.+ +.||+|+|....+++
T Consensus 81 ~~gv~i~-~~~v~~i~~~----~~~v~~v~~~-~g~--~i~a-~~VV~A~G~~s~~~~ 129 (232)
T 2cul_A 81 LRPLHLF-QATATGLLLE----GNRVVGVRTW-EGP--PARG-EKVVLAVGSFLGARL 129 (232)
T ss_dssp CTTEEEE-ECCEEEEEEE----TTEEEEEEET-TSC--CEEC-SEEEECCTTCSSCEE
T ss_pred CCCcEEE-EeEEEEEEEe----CCEEEEEEEC-CCC--EEEC-CEEEECCCCChhhce
Confidence 3589999 5799999876 2466677643 443 4677 799999998655554
No 79
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=82.34 E-value=1.5 Score=33.28 Aligned_cols=54 Identities=20% Similarity=0.199 Sum_probs=36.2
Q ss_pred cCCCeEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcccCCchhhhccc
Q psy8943 25 LRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQLLMVSGG 89 (134)
Q Consensus 25 ~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai~tP~lLl~SGi 89 (134)
.+.+++|++++.|++|..+. +. +.+...+. .+.+ +.||+|+|+. ++.|+...|+
T Consensus 165 ~~~Gv~i~~~~~V~~i~~~~----~~---~~V~t~~g--~i~a-~~VV~A~G~~-s~~l~~~~g~ 218 (381)
T 3nyc_A 165 RRNQGQVLCNHEALEIRRVD----GA---WEVRCDAG--SYRA-AVLVNAAGAW-CDAIAGLAGV 218 (381)
T ss_dssp HHTTCEEESSCCCCEEEEET----TE---EEEECSSE--EEEE-SEEEECCGGG-HHHHHHHHTC
T ss_pred HHCCCEEEcCCEEEEEEEeC----Ce---EEEEeCCC--EEEc-CEEEECCChh-HHHHHHHhCC
Confidence 34579999999999998762 23 33333332 5778 7899999975 4555554454
No 80
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=81.89 E-value=4.4 Score=32.42 Aligned_cols=59 Identities=10% Similarity=0.173 Sum_probs=40.7
Q ss_pred CeE--EEccceEEEEEeccCCCCCeEEEEEEEe--CCeEEEEEeceEEEecCCcccCCchhhhcccc
Q psy8943 28 NLH--IAMETQALRLLFDKSGPVPKAVGIEILR--DGRKHIIRAKKEIISSAGAINSPQLLMVSGGS 90 (134)
Q Consensus 28 nl~--i~t~~~V~ri~~~~~~~~~~a~gV~~~~--~g~~~~~~a~~~vIlaaGai~tP~lLl~SGig 90 (134)
+++ |..++.|++|..+. ++..-.|.+.+ +|....+.+ +.||+|.|....|++....|+.
T Consensus 115 gv~~~i~~~~~V~~v~~~~---~~~~~~V~~~~~~~g~~~~~~~-d~VVvAtG~~s~p~~p~ipG~~ 177 (464)
T 2xve_A 115 GVRKYIRFNTAVRHVEFNE---DSQTFTVTVQDHTTDTIYSEEF-DYVVCCTGHFSTPYVPEFEGFE 177 (464)
T ss_dssp TCGGGEECSEEEEEEEEET---TTTEEEEEEEETTTTEEEEEEE-SEEEECCCSSSSBCCCCCBTTT
T ss_pred CCcceEEeCCEEEEEEEcC---CCCcEEEEEEEcCCCceEEEEc-CEEEECCCCCCCCccCCCCCcc
Confidence 565 88899999998763 11122455554 355566777 7999999988888877655654
No 81
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=81.41 E-value=1 Score=36.45 Aligned_cols=47 Identities=11% Similarity=0.200 Sum_probs=35.6
Q ss_pred cCCCeEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCccc
Q psy8943 25 LRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAIN 79 (134)
Q Consensus 25 ~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai~ 79 (134)
...+++|+.++.| +|..+ ++++.||.+.+.+. .+.+ +.||+|+|+..
T Consensus 130 ~~~gv~i~~~~~v-~l~~~----~~~v~Gv~v~~~~g--~~~a-~~VVlAtGg~~ 176 (472)
T 2e5v_A 130 REEGIPIIEDRLV-EIRVK----DGKVTGFVTEKRGL--VEDV-DKLVLATGGYS 176 (472)
T ss_dssp HHTTCCEECCCEE-EEEEE----TTEEEEEEETTTEE--ECCC-SEEEECCCCCG
T ss_pred HhCCCEEEECcEE-EEEEe----CCEEEEEEEEeCCC--eEEe-eeEEECCCCCc
Confidence 4578999999999 99876 35888888764222 3556 89999999864
No 82
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=81.20 E-value=3.2 Score=31.44 Aligned_cols=48 Identities=23% Similarity=0.241 Sum_probs=32.7
Q ss_pred cCCCeEEEccceEEEEEeccCCCCCeEEEEEEEe-CCeEEEEEeceEEEecCCcccCCchh
Q psy8943 25 LRKNLHIAMETQALRLLFDKSGPVPKAVGIEILR-DGRKHIIRAKKEIISSAGAINSPQLL 84 (134)
Q Consensus 25 ~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~-~g~~~~~~a~~~vIlaaGai~tP~lL 84 (134)
.+.+++|+.++.|++|..+. +. +.+.. ++ .+.+ +.||+|+|+. ++.|+
T Consensus 160 ~~~G~~i~~~~~V~~i~~~~----~~---~~v~~~~g---~~~a-~~vV~a~G~~-s~~l~ 208 (372)
T 2uzz_A 160 KEAGCAQLFNCPVTAIRHDD----DG---VTIETADG---EYQA-KKAIVCAGTW-VKDLL 208 (372)
T ss_dssp HHTTCEEECSCCEEEEEECS----SS---EEEEESSC---EEEE-EEEEECCGGG-GGGTS
T ss_pred HHCCCEEEcCCEEEEEEEcC----CE---EEEEECCC---eEEc-CEEEEcCCcc-HHhhc
Confidence 34579999999999998762 22 22333 34 3677 7999999975 44444
No 83
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=81.06 E-value=2.1 Score=36.52 Aligned_cols=49 Identities=16% Similarity=0.329 Sum_probs=36.3
Q ss_pred CCCeEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcccCCch
Q psy8943 26 RKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQL 83 (134)
Q Consensus 26 ~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai~tP~l 83 (134)
.+|++|+ ++.|+.|..+ ++++.+|... +|. .+.+ +.||+|+|+.....+
T Consensus 136 ~~GVeI~-~~~Vt~L~~e----~g~V~GV~t~-dG~--~i~A-daVVLATG~~s~~~~ 184 (637)
T 2zxi_A 136 QENLYIK-QEEVVDIIVK----NNQVVGVRTN-LGV--EYKT-KAVVVTTGTFLNGVI 184 (637)
T ss_dssp CTTEEEE-ESCEEEEEES----SSBEEEEEET-TSC--EEEC-SEEEECCTTCBTCEE
T ss_pred CCCCEEE-EeEEEEEEec----CCEEEEEEEC-CCc--EEEe-CEEEEccCCCccCce
Confidence 3799995 6799999876 3578888764 453 5777 799999998755443
No 84
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=80.80 E-value=1.4 Score=38.04 Aligned_cols=55 Identities=18% Similarity=0.205 Sum_probs=38.3
Q ss_pred cCCCeEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcccCCchhhhccc
Q psy8943 25 LRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQLLMVSGG 89 (134)
Q Consensus 25 ~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai~tP~lLl~SGi 89 (134)
...+++|++++.|++|..+ ++++.+|... +| .+.+ +.||+|+|+. ++.++...|+
T Consensus 162 ~~~Gv~i~~~t~V~~i~~~----~~~v~~V~t~-~G---~i~A-d~VV~AaG~~-s~~l~~~~g~ 216 (830)
T 1pj5_A 162 ESAGVTYRGSTTVTGIEQS----GGRVTGVQTA-DG---VIPA-DIVVSCAGFW-GAKIGAMIGM 216 (830)
T ss_dssp HHTTCEEECSCCEEEEEEE----TTEEEEEEET-TE---EEEC-SEEEECCGGG-HHHHHHTTTC
T ss_pred HHcCCEEECCceEEEEEEe----CCEEEEEEEC-Cc---EEEC-CEEEECCccc-hHHHHHHhCC
Confidence 3457999999999999876 2466666532 33 5778 7999999986 3555444443
No 85
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=80.35 E-value=7.9 Score=30.41 Aligned_cols=48 Identities=10% Similarity=0.086 Sum_probs=36.3
Q ss_pred CCeEEEccceEEEEEeccCCCCCeEEEEEEEe--CCeEEEEEeceEEEecCCcccC
Q psy8943 27 KNLHIAMETQALRLLFDKSGPVPKAVGIEILR--DGRKHIIRAKKEIISSAGAINS 80 (134)
Q Consensus 27 ~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~--~g~~~~~~a~~~vIlaaGai~t 80 (134)
.+++|++++.|++|.-+. + ...|.+.+ +|....+.+ +.||+|.|..-.
T Consensus 329 ~~v~i~~~~~v~~v~~~~----~-~~~v~~~~~~~g~~~~~~~-D~Vv~AtG~~p~ 378 (463)
T 3s5w_A 329 PRHAFRCMTTVERATATA----Q-GIELALRDAGSGELSVETY-DAVILATGYERQ 378 (463)
T ss_dssp CCSEEETTEEEEEEEEET----T-EEEEEEEETTTCCEEEEEE-SEEEECCCEECC
T ss_pred CCeEEEeCCEEEEEEecC----C-EEEEEEEEcCCCCeEEEEC-CEEEEeeCCCCC
Confidence 689999999999987651 2 24466654 566667888 799999997766
No 86
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=79.73 E-value=3.5 Score=35.23 Aligned_cols=48 Identities=23% Similarity=0.319 Sum_probs=35.4
Q ss_pred CCeEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcccCCch
Q psy8943 27 KNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQL 83 (134)
Q Consensus 27 ~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai~tP~l 83 (134)
+|++|+ ++.|+.|..+ ++++.+|... +| ..+.+ +.||+|+|+.-....
T Consensus 138 ~GV~I~-~~~V~~L~~e----~g~V~GV~t~-dG--~~I~A-d~VVLATGt~s~~~~ 185 (651)
T 3ces_A 138 PNLMIF-QQAVEDLIVE----NDRVVGAVTQ-MG--LKFRA-KAVVLTVGTFLDGKI 185 (651)
T ss_dssp TTEEEE-ECCEEEEEES----SSBEEEEEET-TS--EEEEE-EEEEECCSTTTCCEE
T ss_pred CCCEEE-EEEEEEEEec----CCEEEEEEEC-CC--CEEEC-CEEEEcCCCCccCcc
Confidence 789995 6799999876 3578888764 45 35777 799999998654443
No 87
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=78.74 E-value=2.1 Score=35.14 Aligned_cols=47 Identities=19% Similarity=0.328 Sum_probs=33.5
Q ss_pred cCCCeEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcc
Q psy8943 25 LRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAI 78 (134)
Q Consensus 25 ~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai 78 (134)
...+.+|++++.|++|..+ .+++++||... +|. .+.| +.||++++-+
T Consensus 267 ~~~Gg~i~l~t~V~~I~~d---~~g~v~gV~~~-~G~--~i~A-d~VI~a~~~~ 313 (475)
T 3p1w_A 267 AINGGTFMLNKNVVDFVFD---DDNKVCGIKSS-DGE--IAYC-DKVICDPSYV 313 (475)
T ss_dssp HHC--CEESSCCEEEEEEC---TTSCEEEEEET-TSC--EEEE-EEEEECGGGC
T ss_pred HHcCCEEEeCCeEEEEEEe---cCCeEEEEEEC-CCc--EEEC-CEEEECCCcc
Confidence 3457999999999999984 14678888765 443 3667 6888888765
No 88
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=78.05 E-value=2.5 Score=35.15 Aligned_cols=58 Identities=16% Similarity=0.274 Sum_probs=40.3
Q ss_pred cCCCeEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcccCC--chhhhcccc
Q psy8943 25 LRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSP--QLLMVSGGS 90 (134)
Q Consensus 25 ~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai~tP--~lLl~SGig 90 (134)
...+++|+.++.|++|..+ ++++.+|.+. +|. .+.+ +.||+|.|+-... ++|...|+.
T Consensus 231 ~~~Gv~I~~~t~V~~I~~~----~~~v~gV~l~-~G~--~i~A-d~VVlA~G~~s~~~~~~l~~~Gi~ 290 (549)
T 3nlc_A 231 IELGGEIRFSTRVDDLHME----DGQITGVTLS-NGE--EIKS-RHVVLAVGHSARDTFEMLHERGVY 290 (549)
T ss_dssp HHTTCEEESSCCEEEEEES----SSBEEEEEET-TSC--EEEC-SCEEECCCTTCHHHHHHHHHTTCC
T ss_pred HhcCCEEEeCCEEEEEEEe----CCEEEEEEEC-CCC--EEEC-CEEEECCCCChhhHHHHHHHcCCC
Confidence 3458999999999999876 3467777765 443 4677 7999999985322 234344554
No 89
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=77.37 E-value=3.9 Score=30.64 Aligned_cols=56 Identities=11% Similarity=0.194 Sum_probs=40.2
Q ss_pred hcCCCeEEEccceEEEEEeccCCCCCeEEEEEEEe--CCeEEEEEeceEEEecCCcccCCchhh
Q psy8943 24 RLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILR--DGRKHIIRAKKEIISSAGAINSPQLLM 85 (134)
Q Consensus 24 ~~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~--~g~~~~~~a~~~vIlaaGai~tP~lLl 85 (134)
....++++++++.|++|.-+ +++.+|.+.+ +|....+.+ +.||+|.|..-.+.+|.
T Consensus 201 ~~~~gV~v~~~~~v~~i~~~-----~~~~~v~~~~~~~g~~~~i~~-D~vi~a~G~~p~~~~~~ 258 (335)
T 2a87_A 201 RNNDKIRFLTNHTVVAVDGD-----TTVTGLRVRDTNTGAETTLPV-TGVFVAIGHEPRSGLVR 258 (335)
T ss_dssp HHCTTEEEECSEEEEEEECS-----SSCCEEEEEEETTSCCEEECC-SCEEECSCEEECCTTTB
T ss_pred hccCCcEEEeCceeEEEecC-----CcEeEEEEEEcCCCceEEeec-CEEEEccCCccChhHhh
Confidence 34678999999999998644 2455677764 565556777 69999999775555553
No 90
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=76.00 E-value=10 Score=30.04 Aligned_cols=64 Identities=11% Similarity=0.084 Sum_probs=40.8
Q ss_pred hhhcCCCeEEEccceEEEEEeccCCCCCeEEEEEEEe--CCeEEEEEeceEEEecCCcccCCc--hhhhccc
Q psy8943 22 PIRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILR--DGRKHIIRAKKEIISSAGAINSPQ--LLMVSGG 89 (134)
Q Consensus 22 ~~~~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~--~g~~~~~~a~~~vIlaaGai~tP~--lLl~SGi 89 (134)
..+...+++|++++.|++|.-+. .+....|.+.+ ++....+.+ +.||+|.|..-... +|..+|+
T Consensus 232 ~~l~~~gv~i~~~~~v~~i~~~~---~~~~~~v~~~~~~~g~~~~~~~-D~vv~a~G~~p~~~~l~l~~~g~ 299 (478)
T 1v59_A 232 KFLKKQGLDFKLSTKVISAKRND---DKNVVEIVVEDTKTNKQENLEA-EVLLVAVGRRPYIAGLGAEKIGL 299 (478)
T ss_dssp HHHHHTTCEEECSEEEEEEEEET---TTTEEEEEEEETTTTEEEEEEE-SEEEECSCEEECCTTSCTTTTTC
T ss_pred HHHHHCCCEEEeCCEEEEEEEec---CCCeEEEEEEEcCCCCceEEEC-CEEEECCCCCcCCCCCCchhcCc
Confidence 33345689999999999997520 12344566553 344456777 79999999765544 3333454
No 91
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=75.98 E-value=8.3 Score=30.60 Aligned_cols=60 Identities=22% Similarity=0.165 Sum_probs=41.2
Q ss_pred hhhcCCCeEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcccCCchhhhcccc
Q psy8943 22 PIRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQLLMVSGGS 90 (134)
Q Consensus 22 ~~~~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai~tP~lLl~SGig 90 (134)
..+...+++|++++.|++|.-+ +++++ |.+. +|. .+.+ +.||+|.|..-.+.++...|+.
T Consensus 210 ~~l~~~GV~i~~~~~v~~i~~~----~~~v~-v~~~-~g~--~i~a-D~Vv~a~G~~p~~~l~~~~gl~ 269 (472)
T 3iwa_A 210 HDLEKNDVVVHTGEKVVRLEGE----NGKVA-RVIT-DKR--TLDA-DLVILAAGVSPNTQLARDAGLE 269 (472)
T ss_dssp HHHHHTTCEEECSCCEEEEEES----SSBEE-EEEE-SSC--EEEC-SEEEECSCEEECCHHHHHHTCC
T ss_pred HHHHhcCCEEEeCCEEEEEEcc----CCeEE-EEEe-CCC--EEEc-CEEEECCCCCcCHHHHHhCCcc
Confidence 3345578999999999999764 23444 4443 554 4667 7999999987666666555654
No 92
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=75.16 E-value=4.4 Score=31.91 Aligned_cols=52 Identities=10% Similarity=0.162 Sum_probs=34.8
Q ss_pred cCCCeEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcccCCc
Q psy8943 25 LRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQ 82 (134)
Q Consensus 25 ~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai~tP~ 82 (134)
...+++|++++.|++|..+..+.++. +.+..++. .+.+ +.||+|+|+...|+
T Consensus 120 ~~~Gv~i~~~~~v~~i~~~~~g~~~~---~~v~~~~g--~i~a-d~VVlAtG~~s~p~ 171 (401)
T 2gqf_A 120 DKYGAKILLRSEVSQVERIQNDEKVR---FVLQVNST--QWQC-KNLIVATGGLSMPG 171 (401)
T ss_dssp HHHTCEEECSCCEEEEEECCSCSSCC---EEEEETTE--EEEE-SEEEECCCCSSCGG
T ss_pred HHCCCEEEeCCEEEEEEcccCcCCCe---EEEEECCC--EEEC-CEEEECCCCccCCC
Confidence 44679999999999997652100122 23333333 5778 79999999987665
No 93
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=75.11 E-value=4.9 Score=31.64 Aligned_cols=56 Identities=16% Similarity=0.184 Sum_probs=35.3
Q ss_pred hhhhhhcCCCeEEEccceEEEEEeccCCCCCeEEE--EEEEe-CCeEEEEEeceEEEecCCc
Q psy8943 19 FLRPIRLRKNLHIAMETQALRLLFDKSGPVPKAVG--IEILR-DGRKHIIRAKKEIISSAGA 77 (134)
Q Consensus 19 ~l~~~~~~~nl~i~t~~~V~ri~~~~~~~~~~a~g--V~~~~-~g~~~~~~a~~~vIlaaGa 77 (134)
|+......-+.+|..++.|++|..+.. +++... |...+ .+....+.+ +.||+|.|+
T Consensus 132 ~l~~~~~~~~~~i~~~~~V~~i~~~~~--~~~~~~~~V~~~~g~g~~~~~~~-d~lVlAtG~ 190 (463)
T 3s5w_A 132 YLRWVASHFQEQSRYGEEVLRIEPMLS--AGQVEALRVISRNADGEELVRTT-RALVVSPGG 190 (463)
T ss_dssp HHHHHHTTCTTTEEESEEEEEEEEEEE--TTEEEEEEEEEEETTSCEEEEEE-SEEEECCCC
T ss_pred HHHHHHHHcCCeEEeCCEEEEEEEecC--CCceEEEEEEEecCCCceEEEEe-CEEEECCCC
Confidence 333333444578999999999987521 123333 33333 355557788 789999997
No 94
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=74.47 E-value=12 Score=29.56 Aligned_cols=54 Identities=13% Similarity=0.106 Sum_probs=37.3
Q ss_pred hcCCCeEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcccCCch
Q psy8943 24 RLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQL 83 (134)
Q Consensus 24 ~~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai~tP~l 83 (134)
+...++++++++.|++|.-+ ++. ..|.+..++....+.+ +.||+|.|..-...+
T Consensus 221 l~~~gv~i~~~~~v~~i~~~----~~~-~~v~~~~~g~~~~~~~-D~vv~a~G~~p~~~~ 274 (455)
T 1ebd_A 221 LKKKGVEVVTNALAKGAEER----EDG-VTVTYEANGETKTIDA-DYVLVTVGRRPNTDE 274 (455)
T ss_dssp HHHTTCEEEESEEEEEEEEE----TTE-EEEEEEETTEEEEEEE-SEEEECSCEEESCSS
T ss_pred HHHCCCEEEeCCEEEEEEEe----CCe-EEEEEEeCCceeEEEc-CEEEECcCCCcccCc
Confidence 34568999999999998654 122 2344444555556777 799999998765555
No 95
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=73.52 E-value=8.8 Score=29.31 Aligned_cols=51 Identities=14% Similarity=0.087 Sum_probs=36.0
Q ss_pred CCCeEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcccCC
Q psy8943 26 RKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSP 81 (134)
Q Consensus 26 ~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai~tP 81 (134)
..+++|..++.|+.|..+. ++. ..|.+..+|....+.+ +.||.|.|.-...
T Consensus 115 ~~g~~i~~~~~v~~i~~~~---~~~-~~v~~~~~g~~~~~~a-~~vV~AdG~~S~v 165 (394)
T 1k0i_A 115 ACGATTVYQAAEVRLHDLQ---GER-PYVTFERDGERLRLDC-DYIAGCDGFHGIS 165 (394)
T ss_dssp HTTCEEESSCEEEEEECTT---SSS-CEEEEEETTEEEEEEC-SEEEECCCTTCST
T ss_pred hcCCeEEeceeEEEEEEec---CCc-eEEEEecCCcEEEEEe-CEEEECCCCCcHH
Confidence 3479999999999997642 122 2466645777667888 7899998875443
No 96
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=72.37 E-value=2.8 Score=32.83 Aligned_cols=59 Identities=17% Similarity=0.166 Sum_probs=42.0
Q ss_pred hhcCCCeEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcccCCchhhhcccc
Q psy8943 23 IRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQLLMVSGGS 90 (134)
Q Consensus 23 ~~~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai~tP~lLl~SGig 90 (134)
.....+++|++++.|++|.-+ +++.+|.+. +|. .+.+ +.||+|.|..-...+|..+|+.
T Consensus 194 ~l~~~GV~i~~~~~v~~i~~~-----~~~~~v~~~-dg~--~i~a-D~Vv~a~G~~p~~~l~~~~gl~ 252 (410)
T 3ef6_A 194 LLTELGVQVELGTGVVGFSGE-----GQLEQVMAS-DGR--SFVA-DSALICVGAEPADQLARQAGLA 252 (410)
T ss_dssp HHHHHTCEEECSCCEEEEECS-----SSCCEEEET-TSC--EEEC-SEEEECSCEEECCHHHHHTTCC
T ss_pred HHHHCCCEEEeCCEEEEEecc-----CcEEEEEEC-CCC--EEEc-CEEEEeeCCeecHHHHHhCCCc
Confidence 334568999999999998654 245566654 443 4566 7999999988777777666654
No 97
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=71.96 E-value=8 Score=30.45 Aligned_cols=56 Identities=13% Similarity=0.014 Sum_probs=37.5
Q ss_pred CeEEEccceEEEEEeccCCCCCeEEEEEEEe--CCe-EEEEEeceEEEecCCcccCCchhhhccc
Q psy8943 28 NLHIAMETQALRLLFDKSGPVPKAVGIEILR--DGR-KHIIRAKKEIISSAGAINSPQLLMVSGG 89 (134)
Q Consensus 28 nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~--~g~-~~~~~a~~~vIlaaGai~tP~lLl~SGi 89 (134)
+..|..++.|++|..+ ++. ..|.+.+ +|. ...+.+ +.||+|.|+...|.+....|+
T Consensus 129 ~~~i~~~t~V~~v~~~----~~~-~~V~~~~~~~G~~~~~~~~-d~VVvAtG~~s~p~~p~i~G~ 187 (447)
T 2gv8_A 129 LPFIKLATDVLDIEKK----DGS-WVVTYKGTKAGSPISKDIF-DAVSICNGHYEVPYIPNIKGL 187 (447)
T ss_dssp GGGEECSEEEEEEEEE----TTE-EEEEEEESSTTCCEEEEEE-SEEEECCCSSSSBCBCCCBTH
T ss_pred hCeEEeCCEEEEEEeC----CCe-EEEEEeecCCCCeeEEEEe-CEEEECCCCCCCCCCCCCCCh
Confidence 4567889999999654 122 2344444 255 446777 799999999888876654454
No 98
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=71.64 E-value=9.8 Score=30.23 Aligned_cols=55 Identities=7% Similarity=0.115 Sum_probs=37.9
Q ss_pred hhcCCCeEEEccceEEEEEeccCCCCCeEEEEEEEeC--CeEEEEEeceEEEecCCcccCCch
Q psy8943 23 IRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRD--GRKHIIRAKKEIISSAGAINSPQL 83 (134)
Q Consensus 23 ~~~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~--g~~~~~~a~~~vIlaaGai~tP~l 83 (134)
.+...++++++++.|++|.-+ ++. ..|.+.++ |....+.+ +.||+|.|..-...+
T Consensus 219 ~l~~~gV~i~~~~~v~~i~~~----~~~-~~v~~~~~~~g~~~~i~~-D~vv~a~G~~p~~~~ 275 (464)
T 2eq6_A 219 ALEKEGIRVRTKTKAVGYEKK----KDG-LHVRLEPAEGGEGEEVVV-DKVLVAVGRKPRTEG 275 (464)
T ss_dssp HHHHTTCEEECSEEEEEEEEE----TTE-EEEEEEETTCCSCEEEEE-SEEEECSCEEESCTT
T ss_pred HHHhcCCEEEcCCEEEEEEEe----CCE-EEEEEeecCCCceeEEEc-CEEEECCCcccCCCC
Confidence 334568999999999999754 122 34555535 66556777 799999997655554
No 99
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=71.07 E-value=4.4 Score=32.03 Aligned_cols=61 Identities=20% Similarity=0.201 Sum_probs=41.4
Q ss_pred hcCCCeEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcccCCchhhhcccc
Q psy8943 24 RLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQLLMVSGGS 90 (134)
Q Consensus 24 ~~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai~tP~lLl~SGig 90 (134)
....++++.+++.|++|.-+. .++++.+|.+. +|. .+.+ +.||+|.|..-...+|..+|+.
T Consensus 201 l~~~GV~i~~~~~v~~i~~~~--~~~~v~~v~~~-~G~--~i~~-D~Vv~a~G~~p~~~l~~~~gl~ 261 (431)
T 1q1r_A 201 HREAGVDIRTGTQVCGFEMST--DQQKVTAVLCE-DGT--RLPA-DLVIAGIGLIPNCELASAAGLQ 261 (431)
T ss_dssp HHHHTCEEECSCCEEEEEECT--TTCCEEEEEET-TSC--EEEC-SEEEECCCEEECCHHHHHTTCC
T ss_pred HHhCCeEEEeCCEEEEEEecc--CCCcEEEEEeC-CCC--EEEc-CEEEECCCCCcCcchhhccCCC
Confidence 345689999999999987510 12466677654 453 4566 7999999987665666666653
No 100
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=70.83 E-value=11 Score=32.01 Aligned_cols=46 Identities=20% Similarity=0.302 Sum_probs=33.8
Q ss_pred CCCeEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcccC
Q psy8943 26 RKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINS 80 (134)
Q Consensus 26 ~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai~t 80 (134)
.+|++|+. ..|+.|..+ ++++.||... +|. .+.+ +.||+|+|+.-.
T Consensus 130 ~~GV~I~~-~~V~~L~~d----~g~V~GV~t~-~G~--~i~A-d~VVLATG~~s~ 175 (641)
T 3cp8_A 130 EPNIDLLQ-DTVIGVSAN----SGKFSSVTVR-SGR--AIQA-KAAILACGTFLN 175 (641)
T ss_dssp CTTEEEEE-CCEEEEEEE----TTEEEEEEET-TSC--EEEE-EEEEECCTTCBT
T ss_pred CCCCEEEe-eEEEEEEec----CCEEEEEEEC-CCc--EEEe-CEEEECcCCCCC
Confidence 37999965 589998876 3578888754 453 5777 799999998644
No 101
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=70.33 E-value=7.8 Score=31.83 Aligned_cols=66 Identities=18% Similarity=0.283 Sum_probs=42.3
Q ss_pred hhhhhhhcCCCe--EEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcccCCchhhhcccc
Q psy8943 18 AFLRPIRLRKNL--HIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQLLMVSGGS 90 (134)
Q Consensus 18 ~~l~~~~~~~nl--~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai~tP~lLl~SGig 90 (134)
.|+...+..-++ +|..++.|+++..+. +.....|... +|. .+.+ +.+|+|.|+...|++...-|+.
T Consensus 91 ~~l~~~~~~~g~~~~i~~~~~V~~i~~~~---~~~~~~V~~~-~G~--~i~a-d~lV~AtG~~s~p~~p~ipG~~ 158 (540)
T 3gwf_A 91 EYLEDVVDRFDLRRHFKFGTEVTSALYLD---DENLWEVTTD-HGE--VYRA-KYVVNAVGLLSAINFPNLPGLD 158 (540)
T ss_dssp HHHHHHHHHTTCGGGEEESCCEEEEEEET---TTTEEEEEET-TSC--EEEE-EEEEECCCSCCSBCCCCCTTGG
T ss_pred HHHHHHHHHcCCcceeEeccEEEEEEEeC---CCCEEEEEEc-CCC--EEEe-CEEEECCcccccCCCCCCCCcc
Confidence 344343334456 788999999998873 2222233332 454 4566 7999999988888876655654
No 102
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=69.75 E-value=8.8 Score=30.41 Aligned_cols=60 Identities=17% Similarity=0.152 Sum_probs=38.6
Q ss_pred hhcCCCeEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcccCCch--hhhcccc
Q psy8943 23 IRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQL--LMVSGGS 90 (134)
Q Consensus 23 ~~~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai~tP~l--Ll~SGig 90 (134)
.+.+.+++|++++.|++|.-+. ++ +..|.+..+|. +.+ +.||+|.|..-...+ |...|+.
T Consensus 220 ~l~~~Gv~i~~~~~v~~i~~~~---~~-~~~v~~~~~g~---i~a-D~Vv~a~G~~p~~~~l~l~~~g~~ 281 (463)
T 4dna_A 220 AMEEKGIRILCEDIIQSVSADA---DG-RRVATTMKHGE---IVA-DQVMLALGRMPNTNGLGLEAAGVR 281 (463)
T ss_dssp HHHHTTCEEECSCCEEEEEECT---TS-CEEEEESSSCE---EEE-SEEEECSCEEESCTTSSTGGGTCC
T ss_pred HHHHCCCEEECCCEEEEEEEcC---CC-EEEEEEcCCCe---EEe-CEEEEeeCcccCCCCCCccccCce
Confidence 3456789999999999997652 22 23444223553 667 799999998665555 3334543
No 103
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=69.68 E-value=16 Score=29.39 Aligned_cols=49 Identities=12% Similarity=0.096 Sum_probs=33.8
Q ss_pred CCCeEEEccceEEEEEeccCCCCCeEE--EEEEEeCCeEEEEEeceEEEecCCcc
Q psy8943 26 RKNLHIAMETQALRLLFDKSGPVPKAV--GIEILRDGRKHIIRAKKEIISSAGAI 78 (134)
Q Consensus 26 ~~nl~i~t~~~V~ri~~~~~~~~~~a~--gV~~~~~g~~~~~~a~~~vIlaaGai 78 (134)
..+++|+.++.|+.|..+. ++++. .|.+.+.+...++++ +.||.|.|+-
T Consensus 132 ~~gv~i~~~~~v~~i~~~~---~~~~~~v~v~~~~~~~~~~i~a-~~vV~AdG~~ 182 (535)
T 3ihg_A 132 KHGGAIRFGTRLLSFRQHD---DDAGAGVTARLAGPDGEYDLRA-GYLVGADGNR 182 (535)
T ss_dssp HTTCEEESSCEEEEEEEEC---GGGCSEEEEEEEETTEEEEEEE-EEEEECCCTT
T ss_pred hCCCEEEeCCEEEEEEECC---CCccccEEEEEEcCCCeEEEEe-CEEEECCCCc
Confidence 3479999999999998763 22222 344555433567888 7888888875
No 104
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=69.53 E-value=21 Score=28.58 Aligned_cols=59 Identities=7% Similarity=0.083 Sum_probs=39.7
Q ss_pred cCCCeEEEccceEEEEEeccCCCCCeEEEEEEEe-CCeEEEEEeceEEEecCCcccCCch--hhhcccc
Q psy8943 25 LRKNLHIAMETQALRLLFDKSGPVPKAVGIEILR-DGRKHIIRAKKEIISSAGAINSPQL--LMVSGGS 90 (134)
Q Consensus 25 ~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~-~g~~~~~~a~~~vIlaaGai~tP~l--Ll~SGig 90 (134)
... ++|.+++.|++|.-+. +.+. |.+.+ +|....+.+ +.||+|.|..-...+ |...|+.
T Consensus 226 ~~~-V~i~~~~~v~~i~~~~----~~v~-v~~~~~~G~~~~i~~-D~Vi~a~G~~p~~~~l~l~~~gl~ 287 (492)
T 3ic9_A 226 NEE-FYFDAKARVISTIEKE----DAVE-VIYFDKSGQKTTESF-QYVLAATGRKANVDKLGLENTSIE 287 (492)
T ss_dssp HTT-SEEETTCEEEEEEECS----SSEE-EEEECTTCCEEEEEE-SEEEECSCCEESCSSSCGGGSCCC
T ss_pred hhC-cEEEECCEEEEEEEcC----CEEE-EEEEeCCCceEEEEC-CEEEEeeCCccCCCCCChhhcCCE
Confidence 344 9999999999997652 2332 55543 565567777 699999998766665 3334543
No 105
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=68.82 E-value=14 Score=29.43 Aligned_cols=57 Identities=11% Similarity=-0.014 Sum_probs=39.7
Q ss_pred hhcCCCeEEEccceEEEEEeccCCCCCeEEEEEEEe--CCeEEEEEeceEEEecCCcccCCchh
Q psy8943 23 IRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILR--DGRKHIIRAKKEIISSAGAINSPQLL 84 (134)
Q Consensus 23 ~~~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~--~g~~~~~~a~~~vIlaaGai~tP~lL 84 (134)
.+...+++|++++.|++|.-+. ++.+ .|.+.+ ++....+.+ +.||+|.|..-...+|
T Consensus 236 ~l~~~Gv~i~~~~~v~~i~~~~---~~~~-~v~~~~~~~~~~~~~~~-D~vi~a~G~~p~~~~l 294 (483)
T 3dgh_A 236 SMEERGIPFLRKTVPLSVEKQD---DGKL-LVKYKNVETGEESEDVY-DTVLWAIGRKGLVDDL 294 (483)
T ss_dssp HHHHTTCCEEETEEEEEEEECT---TSCE-EEEEEETTTCCEEEEEE-SEEEECSCEEECCGGG
T ss_pred HHHhCCCEEEeCCEEEEEEEcC---CCcE-EEEEecCCCCceeEEEc-CEEEECcccccCcCcC
Confidence 3445689999999999997542 2333 466665 245567777 7999999976555555
No 106
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=68.80 E-value=11 Score=29.85 Aligned_cols=59 Identities=14% Similarity=0.178 Sum_probs=37.9
Q ss_pred hhhhh-cCCCeEEEccceEEEEEeccCCCCCeEEEEEEEe-CCeEEEEEeceEEEecCCcccCCchh
Q psy8943 20 LRPIR-LRKNLHIAMETQALRLLFDKSGPVPKAVGIEILR-DGRKHIIRAKKEIISSAGAINSPQLL 84 (134)
Q Consensus 20 l~~~~-~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~-~g~~~~~~a~~~vIlaaGai~tP~lL 84 (134)
+...+ ...+++|++++.|++|.-+. +. ..|.+.. +|....+.+ +.||+|.|..-+..+|
T Consensus 221 l~~~l~~~~gv~i~~~~~v~~i~~~~----~~-~~v~~~~~~g~~~~i~~-D~vv~a~G~~p~~~~l 281 (468)
T 2qae_A 221 LVGALAKNEKMKFMTSTKVVGGTNNG----DS-VSLEVEGKNGKRETVTC-EALLVSVGRRPFTGGL 281 (468)
T ss_dssp HHHHHHHHTCCEEECSCEEEEEEECS----SS-EEEEEECC---EEEEEE-SEEEECSCEEECCTTS
T ss_pred HHHHHhhcCCcEEEeCCEEEEEEEcC----Ce-EEEEEEcCCCceEEEEC-CEEEECCCcccCCCCC
Confidence 33334 56789999999999997542 22 2344442 454456777 7999999987666653
No 107
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=68.44 E-value=9.2 Score=30.25 Aligned_cols=54 Identities=13% Similarity=0.196 Sum_probs=36.9
Q ss_pred hcCCCeEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcccCCch
Q psy8943 24 RLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQL 83 (134)
Q Consensus 24 ~~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai~tP~l 83 (134)
+...++++++++.|++|.-+. +. ..|.+.++|....+.+ +.||+|.|..-...+
T Consensus 222 l~~~gv~i~~~~~v~~i~~~~----~~-~~v~~~~~g~~~~~~~-D~vv~a~G~~p~~~~ 275 (464)
T 2a8x_A 222 FKKLGVTILTATKVESIADGG----SQ-VTVTVTKDGVAQELKA-EKVLQAIGFAPNVEG 275 (464)
T ss_dssp HHHHTCEEECSCEEEEEEECS----SC-EEEEEESSSCEEEEEE-SEEEECSCEEECCSS
T ss_pred HHHcCCEEEeCcEEEEEEEcC----Ce-EEEEEEcCCceEEEEc-CEEEECCCCCccCCC
Confidence 345689999999999986541 22 2344443565556777 799999997765555
No 108
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=68.20 E-value=15 Score=29.29 Aligned_cols=57 Identities=12% Similarity=0.136 Sum_probs=39.7
Q ss_pred hcCCCeEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcccCCchhhhcccc
Q psy8943 24 RLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQLLMVSGGS 90 (134)
Q Consensus 24 ~~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai~tP~lLl~SGig 90 (134)
+...+++|++++.|++|.-+ +++..|.. ++. .+.+ +.||+|.|..-.+.+|..+|+.
T Consensus 237 l~~~Gv~i~~~~~v~~i~~~-----~~v~~v~~--~~~--~i~~-D~vi~a~G~~p~~~~l~~~g~~ 293 (480)
T 3cgb_A 237 ADKHHIEILTNENVKAFKGN-----ERVEAVET--DKG--TYKA-DLVLVSVGVKPNTDFLEGTNIR 293 (480)
T ss_dssp HHHTTCEEECSCCEEEEEES-----SBEEEEEE--TTE--EEEC-SEEEECSCEEESCGGGTTSCCC
T ss_pred HHHcCcEEEcCCEEEEEEcC-----CcEEEEEE--CCC--EEEc-CEEEECcCCCcChHHHHhCCcc
Confidence 34568999999999998643 34544443 332 5677 7999999988666677666654
No 109
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=68.15 E-value=16 Score=29.43 Aligned_cols=47 Identities=21% Similarity=0.244 Sum_probs=33.3
Q ss_pred CCCeEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcc
Q psy8943 26 RKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAI 78 (134)
Q Consensus 26 ~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai 78 (134)
..+++|..++.|+.|..+. +.++ |.+.+.....++++ +.||.|.|+-
T Consensus 118 ~~gv~v~~~~~v~~i~~~~----~~v~-v~~~~~~g~~~~~a-~~vVgADG~~ 164 (500)
T 2qa1_A 118 GLGADIRRGHEVLSLTDDG----AGVT-VEVRGPEGKHTLRA-AYLVGCDGGR 164 (500)
T ss_dssp HTTCEEEETCEEEEEEEET----TEEE-EEEEETTEEEEEEE-SEEEECCCTT
T ss_pred HCCCEEECCcEEEEEEEcC----CeEE-EEEEcCCCCEEEEe-CEEEECCCcc
Confidence 3479999999999998762 3343 66665332456788 7888888874
No 110
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=67.89 E-value=18 Score=28.65 Aligned_cols=55 Identities=9% Similarity=0.111 Sum_probs=36.7
Q ss_pred hhcCCCeEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcccCCch
Q psy8943 23 IRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQL 83 (134)
Q Consensus 23 ~~~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai~tP~l 83 (134)
.+...+++|++++.|++|..+. +.+ .|.+.+.+....+.+ +.||+|.|..-....
T Consensus 230 ~l~~~Gv~v~~~~~v~~i~~~~----~~~-~v~~~~~~g~~~~~~-D~vi~a~G~~p~~~~ 284 (476)
T 3lad_A 230 ILTKQGLKILLGARVTGTEVKN----KQV-TVKFVDAEGEKSQAF-DKLIVAVGRRPVTTD 284 (476)
T ss_dssp HHHHTTEEEEETCEEEEEEECS----SCE-EEEEESSSEEEEEEE-SEEEECSCEEECCTT
T ss_pred HHHhCCCEEEECCEEEEEEEcC----CEE-EEEEEeCCCcEEEEC-CEEEEeeCCcccCCC
Confidence 3445689999999999997652 222 355554322456777 799999997644443
No 111
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=67.14 E-value=10 Score=29.17 Aligned_cols=62 Identities=13% Similarity=0.157 Sum_probs=40.8
Q ss_pred hhhhhcCCCeEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcccCCchhhhcccc
Q psy8943 20 LRPIRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQLLMVSGGS 90 (134)
Q Consensus 20 l~~~~~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai~tP~lLl~SGig 90 (134)
+.......++++++++.|++|.-+. + ...|.+. +|. .+.+ +.||+|.|..-...+|..+|+.
T Consensus 193 l~~~l~~~gv~i~~~~~v~~i~~~~----~-~~~v~~~-~g~--~i~~-d~vv~a~G~~p~~~l~~~~g~~ 254 (384)
T 2v3a_A 193 VQAGLEGLGVRFHLGPVLASLKKAG----E-GLEAHLS-DGE--VIPC-DLVVSAVGLRPRTELAFAAGLA 254 (384)
T ss_dssp HHHHHHTTTCEEEESCCEEEEEEET----T-EEEEEET-TSC--EEEE-SEEEECSCEEECCHHHHHTTCC
T ss_pred HHHHHHHcCCEEEeCCEEEEEEecC----C-EEEEEEC-CCC--EEEC-CEEEECcCCCcCHHHHHHCCCC
Confidence 3333456789999999999997541 2 2234432 453 4666 7999999987666666556654
No 112
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=66.98 E-value=9.2 Score=31.48 Aligned_cols=66 Identities=18% Similarity=0.266 Sum_probs=41.5
Q ss_pred hhhhhhhcCCCe--EEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcccCCchhhhcccc
Q psy8943 18 AFLRPIRLRKNL--HIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQLLMVSGGS 90 (134)
Q Consensus 18 ~~l~~~~~~~nl--~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai~tP~lLl~SGig 90 (134)
.|+......-++ ++..++.|+++.++. ......|... +|. .+.+ +.+|+|.|....|.+....|+.
T Consensus 103 ~yl~~~~~~~g~~~~i~~~~~V~~i~~~~---~~~~w~V~~~-~G~--~i~a-d~lV~AtG~~s~p~~p~ipG~~ 170 (549)
T 4ap3_A 103 AYLEHVADRFDLRRDIRFDTRVTSAVLDE---EGLRWTVRTD-RGD--EVSA-RFLVVAAGPLSNANTPAFDGLD 170 (549)
T ss_dssp HHHHHHHHHTTCGGGEECSCCEEEEEEET---TTTEEEEEET-TCC--EEEE-EEEEECCCSEEECCCCCCTTGG
T ss_pred HHHHHHHHHcCCCccEEECCEEEEEEEcC---CCCEEEEEEC-CCC--EEEe-CEEEECcCCCCCCCCCCCCCcc
Confidence 344333334455 788999999998873 2222233332 454 3566 7999999988778776555554
No 113
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=66.78 E-value=11 Score=28.84 Aligned_cols=44 Identities=20% Similarity=0.449 Sum_probs=31.0
Q ss_pred CCeEEEccceEEEEEeccCCCCCeEE-EEEEEeCCeEEEEEeceEEEecCCcc
Q psy8943 27 KNLHIAMETQALRLLFDKSGPVPKAV-GIEILRDGRKHIIRAKKEIISSAGAI 78 (134)
Q Consensus 27 ~nl~i~t~~~V~ri~~~~~~~~~~a~-gV~~~~~g~~~~~~a~~~vIlaaGai 78 (134)
++++|+.++.|+.|..+. +.++ .|.+. +|. .+.+ +.||.|.|.-
T Consensus 121 ~gv~i~~~~~v~~i~~~~----~~v~g~v~~~-~g~--~~~a-d~vV~AdG~~ 165 (399)
T 2x3n_A 121 ATVEMLFETRIEAVQRDE----RHAIDQVRLN-DGR--VLRP-RVVVGADGIA 165 (399)
T ss_dssp TTEEEECSCCEEEEEECT----TSCEEEEEET-TSC--EEEE-EEEEECCCTT
T ss_pred CCcEEEcCCEEEEEEEcC----CceEEEEEEC-CCC--EEEC-CEEEECCCCC
Confidence 489999999999997762 2343 34443 454 5677 7899998864
No 114
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=65.72 E-value=9.3 Score=30.52 Aligned_cols=61 Identities=11% Similarity=0.150 Sum_probs=39.0
Q ss_pred hcCCCeEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcccCCch-hhhcccc
Q psy8943 24 RLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQL-LMVSGGS 90 (134)
Q Consensus 24 ~~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai~tP~l-Ll~SGig 90 (134)
+...+++|++++.|++|.-+. ++.+..|.+. +|. ..+.+ +.||+|.|..-+..| |..+|+.
T Consensus 236 l~~~Gv~i~~~~~v~~i~~~~---~~~~~~v~~~-~G~-~~i~~-D~vv~a~G~~p~~~l~l~~~gl~ 297 (479)
T 2hqm_A 236 YVKEGINVHKLSKIVKVEKNV---ETDKLKIHMN-DSK-SIDDV-DELIWTIGRKSHLGMGSENVGIK 297 (479)
T ss_dssp HHHHTCEEECSCCEEEEEECC----CCCEEEEET-TSC-EEEEE-SEEEECSCEEECCCSSGGGGTCC
T ss_pred HHhCCeEEEeCCEEEEEEEcC---CCcEEEEEEC-CCc-EEEEc-CEEEECCCCCCccccChhhcCce
Confidence 345689999999999996541 2223445443 553 35667 799999997655555 4445553
No 115
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=65.67 E-value=14 Score=29.08 Aligned_cols=44 Identities=16% Similarity=0.104 Sum_probs=31.0
Q ss_pred eEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcc
Q psy8943 29 LHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAI 78 (134)
Q Consensus 29 l~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai 78 (134)
.+|.+++.|++|..+. +.++ |.+.+.+....+.+ +.||+++..-
T Consensus 252 ~~i~~~~~V~~i~~~~----~~v~-v~~~~g~~~~~~~a-d~vI~a~p~~ 295 (489)
T 2jae_A 252 DNIVFGAEVTSMKNVS----EGVT-VEYTAGGSKKSITA-DYAICTIPPH 295 (489)
T ss_dssp GGEETTCEEEEEEEET----TEEE-EEEEETTEEEEEEE-SEEEECSCHH
T ss_pred CeEEECCEEEEEEEcC----CeEE-EEEecCCeEEEEEC-CEEEECCCHH
Confidence 5699999999998762 3343 55554444456778 7999998754
No 116
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=65.50 E-value=19 Score=28.36 Aligned_cols=53 Identities=11% Similarity=-0.006 Sum_probs=36.5
Q ss_pred hhhcCCCeEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcccCCchh
Q psy8943 22 PIRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQLL 84 (134)
Q Consensus 22 ~~~~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai~tP~lL 84 (134)
..+...+++|++++.|++|..+ ++++ .|.. +++ .+.+ +.||+|.|..-...+|
T Consensus 197 ~~l~~~GV~i~~~~~v~~i~~~----~~~v-~v~~-~~g---~i~a-D~Vv~A~G~~p~~~~l 249 (452)
T 3oc4_A 197 KSLEKQAVIFHFEETVLGIEET----ANGI-VLET-SEQ---EISC-DSGIFALNLHPQLAYL 249 (452)
T ss_dssp HHHHTTTEEEEETCCEEEEEEC----SSCE-EEEE-SSC---EEEE-SEEEECSCCBCCCSSC
T ss_pred HHHHHcCCEEEeCCEEEEEEcc----CCeE-EEEE-CCC---EEEe-CEEEECcCCCCChHHH
Confidence 3445678999999999999754 2344 4444 233 5677 7999999976555544
No 117
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=65.45 E-value=7.2 Score=28.87 Aligned_cols=48 Identities=13% Similarity=0.222 Sum_probs=33.3
Q ss_pred CeEEEccceEEEEEeccCCCCCeEEEEEEEe-CCeEEEEEeceEEEecCCcccCCchh
Q psy8943 28 NLHIAMETQALRLLFDKSGPVPKAVGIEILR-DGRKHIIRAKKEIISSAGAINSPQLL 84 (134)
Q Consensus 28 nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~-~g~~~~~~a~~~vIlaaGai~tP~lL 84 (134)
+++|+.++.|++|..+. ++ +.+.. +|. ....+ +.||+|.|+-...++|
T Consensus 119 g~~i~~~~~v~~i~~~~---~~----~~v~~~~g~-~~~~a-~~vV~a~g~~~~~~~~ 167 (336)
T 1yvv_A 119 DMPVSFSCRITEVFRGE---EH----WNLLDAEGQ-NHGPF-SHVIIATPAPQASTLL 167 (336)
T ss_dssp TCCEECSCCEEEEEECS---SC----EEEEETTSC-EEEEE-SEEEECSCHHHHGGGG
T ss_pred cCcEEecCEEEEEEEeC---CE----EEEEeCCCc-Ccccc-CEEEEcCCHHHHHHhh
Confidence 78999999999998762 22 33333 443 23345 7999999987777766
No 118
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=65.28 E-value=9.7 Score=30.45 Aligned_cols=46 Identities=9% Similarity=0.104 Sum_probs=33.2
Q ss_pred cCCCeEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcc
Q psy8943 25 LRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAI 78 (134)
Q Consensus 25 ~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai 78 (134)
...+++++.+ +|+.|..+. ++.+.+|... +|. .+.+ +.||.|.|+-
T Consensus 184 ~~~gv~~~~~-~v~~i~~~~---~~~~~~v~~~-~g~--~~~a-d~vV~A~G~~ 229 (511)
T 2weu_A 184 IARGVRHVVD-DVQHVGQDE---RGWISGVHTK-QHG--EISG-DLFVDCTGFR 229 (511)
T ss_dssp HHTTCEEEEC-CEEEEEECT---TSCEEEEEES-SSC--EEEC-SEEEECCGGG
T ss_pred HHCCCEEEEC-eEeEEEEcC---CCCEEEEEEC-CCC--EEEc-CEEEECCCcc
Confidence 3468999999 999997752 3466677654 453 5677 7999999874
No 119
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=65.22 E-value=9.9 Score=30.05 Aligned_cols=56 Identities=18% Similarity=0.223 Sum_probs=37.7
Q ss_pred hhcCCCeEEEccceEEEEEeccCCCCCeEEEEEEEe--CCeEEEEEeceEEEecCCcccCCchh
Q psy8943 23 IRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILR--DGRKHIIRAKKEIISSAGAINSPQLL 84 (134)
Q Consensus 23 ~~~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~--~g~~~~~~a~~~vIlaaGai~tP~lL 84 (134)
.+...+++|++++.|++|.-+. +. ..|.+.+ +|....+.+ +.||+|.|..-...+|
T Consensus 227 ~l~~~gv~i~~~~~v~~i~~~~----~~-~~v~~~~~~~g~~~~~~~-D~vv~a~G~~p~~~~l 284 (470)
T 1dxl_A 227 SLEKQGMKFKLKTKVVGVDTSG----DG-VKLTVEPSAGGEQTIIEA-DVVLVSAGRTPFTSGL 284 (470)
T ss_dssp HHHHSSCCEECSEEEEEEECSS----SS-EEEEEEESSSCCCEEEEE-SEEECCCCEEECCTTS
T ss_pred HHHHcCCEEEeCCEEEEEEEcC----Ce-EEEEEEecCCCcceEEEC-CEEEECCCCCcCCCCC
Confidence 3445689999999999986541 22 3455543 443345777 6999999987666653
No 120
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=65.03 E-value=25 Score=27.94 Aligned_cols=57 Identities=5% Similarity=0.005 Sum_probs=39.2
Q ss_pred hhcCCCeEEEccceEEEEEeccCCCCCeEEEEEEEe--CCeEEEEEeceEEEecCCcccCCchh
Q psy8943 23 IRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILR--DGRKHIIRAKKEIISSAGAINSPQLL 84 (134)
Q Consensus 23 ~~~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~--~g~~~~~~a~~~vIlaaGai~tP~lL 84 (134)
.+...+++|++++.|++|.-.. ++. ..|.+.+ ++....+.+ +.||+|.|..-...+|
T Consensus 234 ~l~~~gv~~~~~~~v~~i~~~~---~~~-~~v~~~~~~~g~~~~~~~-D~vi~a~G~~p~~~~l 292 (488)
T 3dgz_A 234 HMESHGTQFLKGCVPSHIKKLP---TNQ-LQVTWEDHASGKEDTGTF-DTVLWAIGRVPETRTL 292 (488)
T ss_dssp HHHHTTCEEEETEEEEEEEECT---TSC-EEEEEEETTTTEEEEEEE-SEEEECSCEEESCGGG
T ss_pred HHHHCCCEEEeCCEEEEEEEcC---CCc-EEEEEEeCCCCeeEEEEC-CEEEEcccCCcccCcC
Confidence 3445689999999999986531 222 3466665 366666777 6999999977665553
No 121
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=64.73 E-value=3.2 Score=32.37 Aligned_cols=50 Identities=30% Similarity=0.374 Sum_probs=30.0
Q ss_pred cCCCeEEEccceEE---------EEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcccCCchhh
Q psy8943 25 LRKNLHIAMETQAL---------RLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQLLM 85 (134)
Q Consensus 25 ~~~nl~i~t~~~V~---------ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai~tP~lLl 85 (134)
...+++|+.++.|+ +|..+ ++++ +|. ..+. .+.+ +.||+|+|+. |+.|+.
T Consensus 183 ~~~Gv~i~~~~~v~~~~g~~~~~~i~~~----~~~v-~v~--~~~g--~i~a-~~VV~A~G~~-s~~l~~ 241 (405)
T 3c4n_A 183 IGQGAGLLLNTRAELVPGGVRLHRLTVT----NTHQ-IVV--HETR--QIRA-GVIIVAAGAA-GPALVE 241 (405)
T ss_dssp HTTTCEEECSCEEEEETTEEEEECBCC------------C--BCCE--EEEE-EEEEECCGGG-HHHHHH
T ss_pred HHCCCEEEcCCEEEeccccccccceEee----CCeE-EEE--ECCc--EEEC-CEEEECCCcc-HHHHHH
Confidence 45689999999999 76544 2233 343 2222 5778 7999999974 444444
No 122
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=64.71 E-value=18 Score=29.19 Aligned_cols=46 Identities=13% Similarity=0.222 Sum_probs=32.4
Q ss_pred CCCeEEEccceEEEEEeccCCCCCeEEEEEEEe-CCeEEEEEeceEEEecCCcc
Q psy8943 26 RKNLHIAMETQALRLLFDKSGPVPKAVGIEILR-DGRKHIIRAKKEIISSAGAI 78 (134)
Q Consensus 26 ~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~-~g~~~~~~a~~~vIlaaGai 78 (134)
..+++|..++.|+.|..+. +.++ |.+.+ +| ..++++ +.||.|.|+-
T Consensus 119 ~~gv~v~~~~~v~~i~~~~----~~v~-v~~~~~~g-~~~~~a-~~vVgADG~~ 165 (499)
T 2qa2_A 119 GRGAELLRGHTVRALTDEG----DHVV-VEVEGPDG-PRSLTT-RYVVGCDGGR 165 (499)
T ss_dssp HTTCEEEESCEEEEEEECS----SCEE-EEEECSSC-EEEEEE-EEEEECCCTT
T ss_pred hCCCEEEcCCEEEEEEEeC----CEEE-EEEEcCCC-cEEEEe-CEEEEccCcc
Confidence 3479999999999997762 2343 55554 34 456788 7888888864
No 123
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=64.64 E-value=14 Score=29.63 Aligned_cols=59 Identities=17% Similarity=0.196 Sum_probs=40.6
Q ss_pred hhcCCCeEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcccCCchhhhcccc
Q psy8943 23 IRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQLLMVSGGS 90 (134)
Q Consensus 23 ~~~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai~tP~lLl~SGig 90 (134)
.....+++|++++.|++|.-+ ++.+ .|.+. +|. .+.+ +.||+|.|..-+..+|..+|+.
T Consensus 235 ~l~~~GV~v~~~~~V~~i~~~----~~~~-~v~l~-dG~--~i~a-D~Vv~a~G~~pn~~l~~~~gl~ 293 (493)
T 1m6i_A 235 KVRREGVKVMPNAIVQSVGVS----SGKL-LIKLK-DGR--KVET-DHIVAAVGLEPNVELAKTGGLE 293 (493)
T ss_dssp HHHTTTCEEECSCCEEEEEEE----TTEE-EEEET-TSC--EEEE-SEEEECCCEEECCTTHHHHTCC
T ss_pred HHHhcCCEEEeCCEEEEEEec----CCeE-EEEEC-CCC--EEEC-CEEEECCCCCccHHHHHHcCCc
Confidence 345678999999999998654 2333 44443 553 4666 7999999987666677666653
No 124
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=64.47 E-value=12 Score=29.40 Aligned_cols=59 Identities=14% Similarity=0.189 Sum_probs=38.9
Q ss_pred hhhhhhcCCCeEEEccceEEEEEeccCCCCCeEEEEEEEe-CCeEEEEEeceEEEecCCcccCCchhhhcc
Q psy8943 19 FLRPIRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILR-DGRKHIIRAKKEIISSAGAINSPQLLMVSG 88 (134)
Q Consensus 19 ~l~~~~~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~-~g~~~~~~a~~~vIlaaGai~tP~lLl~SG 88 (134)
++.....+.++++++++.|++|.-+ ++.+.+ ++...++.+ +.+|++.|.-. |.++..+|
T Consensus 205 ~l~~~l~~~GV~~~~~~~v~~v~~~---------~~~~~~~~g~~~~i~~-d~vi~~~G~~~-~~~~~~~~ 264 (430)
T 3hyw_A 205 LVEDLFAERNIDWIANVAVKAIEPD---------KVIYEDLNGNTHEVPA-KFTMFMPSFQG-PEVVASAG 264 (430)
T ss_dssp HHHHHHHHTTCEEECSCEEEEECSS---------EEEEECTTSCEEEEEC-SEEEEECEEEC-CHHHHTTC
T ss_pred HHHHHHHhCCeEEEeCceEEEEeCC---------ceEEEeeCCCceEeec-ceEEEeccCCC-chHHHhcc
Confidence 3434445568999999999998422 344444 566667888 68888888554 45555554
No 125
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=64.21 E-value=16 Score=28.99 Aligned_cols=57 Identities=11% Similarity=0.178 Sum_probs=36.9
Q ss_pred hhhcCCCeEEEccceEEEEEeccCCCCCeEEEEEEEe--CCeEEEEEeceEEEecCCcccCCch
Q psy8943 22 PIRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILR--DGRKHIIRAKKEIISSAGAINSPQL 83 (134)
Q Consensus 22 ~~~~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~--~g~~~~~~a~~~vIlaaGai~tP~l 83 (134)
..+...+++|++++.|++|.-+. +....|.+.+ .+....+.+ +.||+|.|..-...+
T Consensus 228 ~~l~~~Gv~i~~~~~v~~i~~~~----~~~~~v~~~~~~~~~~~~i~~-D~vv~a~G~~p~~~~ 286 (474)
T 1zmd_A 228 RILQKQGFKFKLNTKVTGATKKS----DGKIDVSIEAASGGKAEVITC-DVLLVCIGRRPFTKN 286 (474)
T ss_dssp HHHHHTTCEEECSEEEEEEEECT----TSCEEEEEEETTSCCCEEEEE-SEEEECSCEEECCTT
T ss_pred HHHHHCCCEEEeCceEEEEEEcC----CceEEEEEEecCCCCceEEEc-CEEEECcCCCcCCCc
Confidence 33445689999999999997542 2212444432 233345677 799999998766555
No 126
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=63.91 E-value=18 Score=28.85 Aligned_cols=55 Identities=7% Similarity=0.140 Sum_probs=37.9
Q ss_pred hhcCCCeEEEccceEEEEEeccCCCCCeEEEEEEEe--CCeEEEEEeceEEEecCCcccCCch
Q psy8943 23 IRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILR--DGRKHIIRAKKEIISSAGAINSPQL 83 (134)
Q Consensus 23 ~~~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~--~g~~~~~~a~~~vIlaaGai~tP~l 83 (134)
.+.+.+++|++++.|++|.-+. + ...|.+.+ +|....+.+ +.||+|.|..-...+
T Consensus 248 ~l~~~gV~v~~~~~v~~i~~~~----~-~~~v~~~~~~~g~~~~i~~-D~Vi~a~G~~p~~~~ 304 (491)
T 3urh_A 248 MLTKQGIDFKLGAKVTGAVKSG----D-GAKVTFEPVKGGEATTLDA-EVVLIATGRKPSTDG 304 (491)
T ss_dssp HHHHTTCEEECSEEEEEEEEET----T-EEEEEEEETTSCCCEEEEE-SEEEECCCCEECCTT
T ss_pred HHHhCCCEEEECCeEEEEEEeC----C-EEEEEEEecCCCceEEEEc-CEEEEeeCCccCCCc
Confidence 3445689999999999997651 2 23466654 254456777 799999997655554
No 127
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=62.23 E-value=12 Score=29.42 Aligned_cols=54 Identities=13% Similarity=0.129 Sum_probs=37.5
Q ss_pred hhcCCCeEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcccCCchhh
Q psy8943 23 IRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQLLM 85 (134)
Q Consensus 23 ~~~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai~tP~lLl 85 (134)
.+...+++|++++.|++|.-+ ++++..|.. +|. .+.+ +.||+|.|..-+..+|.
T Consensus 200 ~l~~~Gv~i~~~~~v~~i~~~----~~~v~~v~~--~g~--~i~~-D~vv~a~G~~p~~~ll~ 253 (452)
T 2cdu_A 200 DYEAHGVNLVLGSKVAAFEEV----DDEIITKTL--DGK--EIKS-DIAILCIGFRPNTELLK 253 (452)
T ss_dssp HHHHTTCEEEESSCEEEEEEE----TTEEEEEET--TSC--EEEE-SEEEECCCEEECCGGGT
T ss_pred HHHHCCCEEEcCCeeEEEEcC----CCeEEEEEe--CCC--EEEC-CEEEECcCCCCCHHHHH
Confidence 344568999999999999753 245555543 453 4666 69999999776665543
No 128
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=62.20 E-value=8.5 Score=25.98 Aligned_cols=58 Identities=14% Similarity=0.087 Sum_probs=35.9
Q ss_pred hhhhhcCCCeEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcccCCchhhhcccc
Q psy8943 20 LRPIRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQLLMVSGGS 90 (134)
Q Consensus 20 l~~~~~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai~tP~lLl~SGig 90 (134)
+.....+.+++++.+ .|++|..+. ++ ..|.. .++ .+.+ +.||+|.|.. |.++...|+.
T Consensus 62 l~~~~~~~gv~v~~~-~v~~i~~~~---~~--~~v~~-~~g---~i~a-d~vI~A~G~~--~~~~~~~g~~ 119 (180)
T 2ywl_A 62 LEAHARRYGAEVRPG-VVKGVRDMG---GV--FEVET-EEG---VEKA-ERLLLCTHKD--PTLPSLLGLT 119 (180)
T ss_dssp HHHHHHHTTCEEEEC-CCCEEEECS---SS--EEEEC-SSC---EEEE-EEEEECCTTC--CHHHHHHTCC
T ss_pred HHHHHHHcCCEEEeC-EEEEEEEcC---CE--EEEEE-CCC---EEEE-CEEEECCCCC--CCccccCCCC
Confidence 333334567999999 999987652 22 12222 244 5677 7999999975 5555555553
No 129
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=61.85 E-value=8.7 Score=30.48 Aligned_cols=46 Identities=15% Similarity=0.138 Sum_probs=33.5
Q ss_pred CCCeEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcc
Q psy8943 26 RKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAI 78 (134)
Q Consensus 26 ~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai 78 (134)
..+.+|++++.|++|..+. +++++++|.. +|. .+.+ +.||+|+|..
T Consensus 254 ~~G~~i~~~~~V~~i~~~~--~~~~~~~V~~--~g~--~~~a-d~VV~a~~~~ 299 (453)
T 2bcg_G 254 IYGGTYMLDTPIDEVLYKK--DTGKFEGVKT--KLG--TFKA-PLVIADPTYF 299 (453)
T ss_dssp HTTCEEECSCCCCEEEEET--TTTEEEEEEE--TTE--EEEC-SCEEECGGGC
T ss_pred HcCCEEECCCEEEEEEEEC--CCCeEEEEEE--CCe--EEEC-CEEEECCCcc
Confidence 3468999999999998761 0357777764 453 4667 6899998876
No 130
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=61.85 E-value=21 Score=28.82 Aligned_cols=59 Identities=14% Similarity=0.219 Sum_probs=37.9
Q ss_pred hhhhhhhcCCCeEEEccceEEEEEeccCCCCC---eEEEEEEEe--CCeEEEEEeceEEEecCCc
Q psy8943 18 AFLRPIRLRKNLHIAMETQALRLLFDKSGPVP---KAVGIEILR--DGRKHIIRAKKEIISSAGA 77 (134)
Q Consensus 18 ~~l~~~~~~~nl~i~t~~~V~ri~~~~~~~~~---~a~gV~~~~--~g~~~~~~a~~~vIlaaGa 77 (134)
.||..++.+=+..|..++.|++|.....+... ..--|...+ ++....+.+ +.||+|.|.
T Consensus 149 ~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~a-r~vVlatG~ 212 (501)
T 4b63_A 149 DYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRT-RKVVIAIGG 212 (501)
T ss_dssp HHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEE-EEEEECCCC
T ss_pred HHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEEe-CEEEECcCC
Confidence 45555444434568899999999876432211 123445554 566777888 799999994
No 131
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=61.37 E-value=13 Score=27.91 Aligned_cols=53 Identities=21% Similarity=0.197 Sum_probs=33.3
Q ss_pred hhhhhcCCCeEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcccCCc
Q psy8943 20 LRPIRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQ 82 (134)
Q Consensus 20 l~~~~~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai~tP~ 82 (134)
+...+...+++++.++.|++|..+. ++ +.+...+. .+.+ +.||+|+|+...|.
T Consensus 94 l~~~~~~~gv~i~~~~~v~~i~~~~---~~----~~v~~~~g--~~~~-d~vVlAtG~~~~p~ 146 (369)
T 3d1c_A 94 LQVVANHYELNIFENTVVTNISADD---AY----YTIATTTE--TYHA-DYIFVATGDYNFPK 146 (369)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEECS---SS----EEEEESSC--CEEE-EEEEECCCSTTSBC
T ss_pred HHHHHHHcCCeEEeCCEEEEEEECC---Ce----EEEEeCCC--EEEe-CEEEECCCCCCccC
Confidence 3333344579999999999997652 12 22222222 3566 79999999865554
No 132
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=61.01 E-value=7.2 Score=30.83 Aligned_cols=43 Identities=16% Similarity=0.359 Sum_probs=32.7
Q ss_pred CCeEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcc
Q psy8943 27 KNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAI 78 (134)
Q Consensus 27 ~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai 78 (134)
.+.+|++++.|++|..+ ++++++|. .+|. .+.+ +.||+++|..
T Consensus 247 ~G~~i~~~~~V~~I~~~----~~~v~~v~--~~g~--~~~a-d~VV~a~~~~ 289 (433)
T 1d5t_A 247 YGGTYMLNKPVDDIIME----NGKVVGVK--SEGE--VARC-KQLICDPSYV 289 (433)
T ss_dssp HTCCCBCSCCCCEEEEE----TTEEEEEE--ETTE--EEEC-SEEEECGGGC
T ss_pred cCCEEECCCEEEEEEEe----CCEEEEEE--ECCe--EEEC-CEEEECCCCC
Confidence 46789999999999876 35777766 3554 4667 7899999875
No 133
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=60.77 E-value=15 Score=32.51 Aligned_cols=61 Identities=11% Similarity=0.078 Sum_probs=43.9
Q ss_pred cCCCeEEEccceEEEEEeccCCCCCeEEEEEEEe------CCeEEEEEeceEEEecCCcccCCchhhhccc
Q psy8943 25 LRKNLHIAMETQALRLLFDKSGPVPKAVGIEILR------DGRKHIIRAKKEIISSAGAINSPQLLMVSGG 89 (134)
Q Consensus 25 ~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~------~g~~~~~~a~~~vIlaaGai~tP~lLl~SGi 89 (134)
...+++|++++.|++|.-+ +++++.+|.+.+ +|....+.+ +.||+|.|..-+..++...|+
T Consensus 327 ~~~GV~v~~~~~v~~i~~~---~~~~v~~v~~~~~~~~~~~G~~~~i~~-D~Vv~a~G~~P~~~l~~~~~g 393 (965)
T 2gag_A 327 VADGVQVISGSVVVDTEAD---ENGELSAIVVAELDEARELGGTQRFEA-DVLAVAGGFNPVVHLHSQRQG 393 (965)
T ss_dssp HHTTCCEEETEEEEEEEEC---TTSCEEEEEEEEECTTCCEEEEEEEEC-SEEEEECCEEECCHHHHHTTC
T ss_pred HhCCeEEEeCCEeEEEecc---CCCCEEEEEEEeccccCCCCceEEEEc-CEEEECCCcCcChHHHHhCCC
Confidence 3457999999999998652 124788888876 354567777 699999998766666655544
No 134
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=60.20 E-value=18 Score=30.21 Aligned_cols=54 Identities=17% Similarity=0.269 Sum_probs=36.7
Q ss_pred cCC-CeEEEccceEEEEEeccCCCCCeEEEEEEEe-----CCeEEEEEeceEEEecCCcccC
Q psy8943 25 LRK-NLHIAMETQALRLLFDKSGPVPKAVGIEILR-----DGRKHIIRAKKEIISSAGAINS 80 (134)
Q Consensus 25 ~~~-nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~-----~g~~~~~~a~~~vIlaaGai~t 80 (134)
..+ +++|..++.|+.|..+..+ ++....|.+.+ +|...++++ +.||.|.|+-..
T Consensus 153 ~~g~~v~v~~~~~v~~l~~~~~~-~~~~v~v~~~~~~~~~~G~~~~i~a-~~vVgADG~~S~ 212 (639)
T 2dkh_A 153 NSPSRLEPHYARRVLDVKVDHGA-ADYPVTVTLERCDAAHAGQIETVQA-RYVVGCDGARSN 212 (639)
T ss_dssp HSTTCCCCBCSEEEEEEEECTTC-SSCCEEEEEEECSGGGTTCEEEEEE-EEEEECCCTTCH
T ss_pred hCCCCcEEecCCEEEEEEECCCC-CcCCEEEEEEeccccCCCCeEEEEe-CEEEECCCcchH
Confidence 344 5699999999999876310 12233566665 576667888 788999887543
No 135
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=59.86 E-value=13 Score=29.94 Aligned_cols=44 Identities=9% Similarity=0.070 Sum_probs=31.4
Q ss_pred CCeEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcc
Q psy8943 27 KNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAI 78 (134)
Q Consensus 27 ~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai 78 (134)
.+++++.+ +|+.|..+. ++.+.+|... +|. .+.+ +.||.|.|+-
T Consensus 189 ~Gv~i~~~-~v~~i~~~~---~g~~~~v~~~-~g~--~i~a-d~vV~AdG~~ 232 (526)
T 2pyx_A 189 LGVTHIRD-HVSQIINNQ---HGDIEKLITK-QNG--EISG-QLFIDCTGAK 232 (526)
T ss_dssp SCCEEEEC-CEEEEEECT---TSCEEEEEES-SSC--EEEC-SEEEECSGGG
T ss_pred CCCEEEEe-EEEEEEecC---CCcEEEEEEC-CCC--EEEc-CEEEECCCcc
Confidence 68999999 699997752 3456666654 443 3777 7999999874
No 136
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=59.62 E-value=14 Score=30.28 Aligned_cols=55 Identities=22% Similarity=0.226 Sum_probs=37.4
Q ss_pred cCCCeEEEccceEEEEEeccCCCCCeEEEEEEEe--CCeEEEEEeceEEEecCCcccCCchhhhccc
Q psy8943 25 LRKNLHIAMETQALRLLFDKSGPVPKAVGIEILR--DGRKHIIRAKKEIISSAGAINSPQLLMVSGG 89 (134)
Q Consensus 25 ~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~--~g~~~~~~a~~~vIlaaGai~tP~lLl~SGi 89 (134)
.+.++++..++.|++|..+. . .|.+.+ ++....+.. +.+|+|.|+ .|..+...|.
T Consensus 104 ~~~gi~v~~~~~V~~id~~~----~---~v~v~~~~~g~~~~~~~-d~lviAtG~--~p~~p~i~G~ 160 (588)
T 3ics_A 104 KRFNLDIRVLSEVVKINKEE----K---TITIKNVTTNETYNEAY-DVLILSPGA--KPIVPSIPGI 160 (588)
T ss_dssp HHTTCEEECSEEEEEEETTT----T---EEEEEETTTCCEEEEEC-SEEEECCCE--EECCCCCTTT
T ss_pred HhcCcEEEECCEEEEEECCC----C---EEEEeecCCCCEEEEeC-CEEEECCCC--CCCCCCCCCc
Confidence 45689999999999997762 2 234443 566566777 799999997 4554444444
No 137
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=59.22 E-value=13 Score=30.37 Aligned_cols=44 Identities=11% Similarity=0.148 Sum_probs=32.1
Q ss_pred CCeEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcc
Q psy8943 27 KNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAI 78 (134)
Q Consensus 27 ~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai 78 (134)
++++++.+ .|+.|..+. ++.+.+|... +|. .+.+ +.||+|.|+-
T Consensus 208 ~Gv~i~~~-~V~~i~~~~---~g~~~~v~~~-~G~--~i~a-d~vI~A~G~~ 251 (550)
T 2e4g_A 208 LGVRHVED-RVEHVQRDA---NGNIESVRTA-TGR--VFDA-DLFVDCSGFR 251 (550)
T ss_dssp SCCEEEEC-CEEEEEECT---TSCEEEEEET-TSC--EEEC-SEEEECCGGG
T ss_pred CCcEEEEC-eEeEEEEcC---CCCEEEEEEC-CCC--EEEC-CEEEECCCCc
Confidence 38999999 999997752 3466677654 453 4677 7999999864
No 138
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=58.33 E-value=8.7 Score=31.09 Aligned_cols=53 Identities=19% Similarity=0.308 Sum_probs=35.4
Q ss_pred CCCeEEEccceEEEEEeccCCCCCeEEEEEEEe--CCeEEEEEeceEEEecCCcccCCchhhhcc
Q psy8943 26 RKNLHIAMETQALRLLFDKSGPVPKAVGIEILR--DGRKHIIRAKKEIISSAGAINSPQLLMVSG 88 (134)
Q Consensus 26 ~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~--~g~~~~~~a~~~vIlaaGai~tP~lLl~SG 88 (134)
+.+++++.++.|++|..+. .. |.+.+ ++....+.. +.+|+|.|+ .|+.+...|
T Consensus 70 ~~~i~~~~~~~V~~id~~~----~~---v~~~~~~~g~~~~~~~-d~lviAtG~--~p~~p~ipG 124 (565)
T 3ntd_A 70 RFNVEVRVKHEVVAIDRAA----KL---VTVRRLLDGSEYQESY-DTLLLSPGA--APIVPPIPG 124 (565)
T ss_dssp HHCCEEETTEEEEEEETTT----TE---EEEEETTTCCEEEEEC-SEEEECCCE--EECCCCCTT
T ss_pred hcCcEEEECCEEEEEECCC----CE---EEEEecCCCCeEEEEC-CEEEECCCC--CCCCCCCCC
Confidence 3579999999999997652 22 33333 455556777 799999998 354443333
No 139
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=58.13 E-value=35 Score=26.93 Aligned_cols=64 Identities=11% Similarity=-0.042 Sum_probs=40.1
Q ss_pred hhcCCCeEEEccceEEEEEeccCCCCCeEEEEEEEeC--CeE--EEEEeceEEEecCCcccCCc-h-hhhcccc
Q psy8943 23 IRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRD--GRK--HIIRAKKEIISSAGAINSPQ-L-LMVSGGS 90 (134)
Q Consensus 23 ~~~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~--g~~--~~~~a~~~vIlaaGai~tP~-l-Ll~SGig 90 (134)
.+...+++|++++.|++|.-+. ++....|.+.+. +.. ..+.+ +.||+|.|..-... | |...|+.
T Consensus 237 ~l~~~gv~i~~~~~v~~i~~~~---~~~~~~v~~~~~~~g~~~g~~~~~-D~vi~a~G~~p~~~~l~l~~~g~~ 306 (478)
T 3dk9_A 237 ELENAGVEVLKFSQVKEVKKTL---SGLEVSMVTAVPGRLPVMTMIPDV-DCLLWAIGRVPNTKDLSLNKLGIQ 306 (478)
T ss_dssp HHHHTTCEEETTEEEEEEEECS---SSEEEEEEECCTTSCCEEEEEEEE-SEEEECSCEEESCTTSCGGGGTCC
T ss_pred HHHHCCCEEEeCCEEEEEEEcC---CCcEEEEEEccCCCCcccceEEEc-CEEEEeeccccCCCCCCchhcCCe
Confidence 3445689999999999987542 232334555542 332 56677 79999999765544 3 3344543
No 140
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=58.12 E-value=3.2 Score=33.63 Aligned_cols=55 Identities=15% Similarity=0.050 Sum_probs=37.0
Q ss_pred cCCCeEEEccceEEEEEeccCCCCCeEEEEEEEe--CCeEEEEEeceEEEecCCcccCCc
Q psy8943 25 LRKNLHIAMETQALRLLFDKSGPVPKAVGIEILR--DGRKHIIRAKKEIISSAGAINSPQ 82 (134)
Q Consensus 25 ~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~--~g~~~~~~a~~~vIlaaGai~tP~ 82 (134)
...+++|+.++.|+.|..+.. ++....|.+.. +|....+.+ +.||+|.|+-..++
T Consensus 177 ~~~gv~v~~~~~v~~i~~~~~--~~~~~~v~~~~~~~g~~~~i~a-d~VV~A~G~~S~~r 233 (497)
T 2bry_A 177 LLLGVEIHWGVKFTGLQPPPR--KGSGWRAQLQPNPPAQLASYEF-DVLISAAGGKFVPE 233 (497)
T ss_dssp HHTTCEEEESCEEEEEECCCS--TTCCBEEEEESCCCHHHHTCCB-SEEEECCCTTCCCT
T ss_pred HhCCCEEEeCCEEEEEEEecC--CCCEEEEEEEECCCCCEEEEEc-CEEEECCCCCcccc
Confidence 346899999999999976421 12234565543 343234677 79999999877665
No 141
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=56.84 E-value=27 Score=27.54 Aligned_cols=47 Identities=15% Similarity=0.179 Sum_probs=30.7
Q ss_pred CeEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcccCCch
Q psy8943 28 NLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQL 83 (134)
Q Consensus 28 nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai~tP~l 83 (134)
+++|.+++.|++|..+. +.+ .|... +|. .+.+ +.||+|+|.-...+|
T Consensus 270 ~~~i~~~~~V~~i~~~~----~~v-~v~~~-~g~--~~~a-d~vI~a~~~~~l~~i 316 (495)
T 2vvm_A 270 RLGYVFGCPVRSVVNER----DAA-RVTAR-DGR--EFVA-KRVVCTIPLNVLSTI 316 (495)
T ss_dssp CEEEESSCCEEEEEECS----SSE-EEEET-TCC--EEEE-EEEEECCCGGGGGGS
T ss_pred ceEEEeCCEEEEEEEcC----CEE-EEEEC-CCC--EEEc-CEEEECCCHHHHhhe
Confidence 49999999999998652 222 23322 443 4667 799999996443333
No 142
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=54.77 E-value=22 Score=28.51 Aligned_cols=60 Identities=10% Similarity=0.097 Sum_probs=38.1
Q ss_pred hhcCCCeEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcccCCc-h-hhhcccc
Q psy8943 23 IRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQ-L-LMVSGGS 90 (134)
Q Consensus 23 ~~~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai~tP~-l-Ll~SGig 90 (134)
.+.+.+++|++++.|++|.-+. ++ ...|.+. +|. .+.+ +.||+|.|..-... | |...|+.
T Consensus 240 ~l~~~GV~i~~~~~v~~i~~~~---~~-~~~v~~~-~G~--~i~~-D~vv~a~G~~p~~~~L~l~~~gl~ 301 (490)
T 1fec_A 240 QLRANGINVRTHENPAKVTKNA---DG-TRHVVFE-SGA--EADY-DVVMLAIGRVPRSQTLQLEKAGVE 301 (490)
T ss_dssp HHHHTTEEEEETCCEEEEEECT---TS-CEEEEET-TSC--EEEE-SEEEECSCEEESCTTSCGGGGTCC
T ss_pred HHHhCCCEEEeCCEEEEEEEcC---CC-EEEEEEC-CCc--EEEc-CEEEEccCCCcCccccCchhcCcc
Confidence 3445689999999999997542 12 2344433 454 4667 79999999765444 3 3444553
No 143
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=54.46 E-value=30 Score=25.19 Aligned_cols=63 Identities=14% Similarity=0.144 Sum_probs=37.8
Q ss_pred hhhhhhhcCCCeEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCccc-CCchhhhccc
Q psy8943 18 AFLRPIRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAIN-SPQLLMVSGG 89 (134)
Q Consensus 18 ~~l~~~~~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai~-tP~lLl~SGi 89 (134)
.++.....+.+++++.++.|++|..+. ++. +.+...+.. +.+ +.+|+|.|+-. .|..+...|.
T Consensus 71 ~~~~~~~~~~~~~~~~~~~v~~i~~~~---~~~---~~v~~~~g~--~~~-d~vVlAtG~~~~~p~~~~~~g~ 134 (332)
T 3lzw_A 71 NNLKEQMAKFDQTICLEQAVESVEKQA---DGV---FKLVTNEET--HYS-KTVIITAGNGAFKPRKLELENA 134 (332)
T ss_dssp HHHHHHHTTSCCEEECSCCEEEEEECT---TSC---EEEEESSEE--EEE-EEEEECCTTSCCEECCCCCTTG
T ss_pred HHHHHHHHHhCCcEEccCEEEEEEECC---CCc---EEEEECCCE--EEe-CEEEECCCCCcCCCCCCCCCCh
Confidence 344444455689999999999997762 111 222222222 566 79999999833 4554444443
No 144
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=53.11 E-value=16 Score=29.57 Aligned_cols=46 Identities=11% Similarity=0.257 Sum_probs=32.5
Q ss_pred cCCCeEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcc
Q psy8943 25 LRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAI 78 (134)
Q Consensus 25 ~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai 78 (134)
...+++++.+ +|+.|..+. ++.+.+|... +|. .+.+ +.||.|.|+-
T Consensus 176 ~~~gv~~~~~-~v~~i~~~~---~g~~~~v~~~-~g~--~i~a-d~vV~A~G~~ 221 (538)
T 2aqj_A 176 VERGVNRVVD-EVVDVRLNN---RGYISNLLTK-EGR--TLEA-DLFIDCSGMR 221 (538)
T ss_dssp HHTTCEEEEC-CEEEEEECT---TSCEEEEEET-TSC--EECC-SEEEECCGGG
T ss_pred HHCCCEEEEe-eEeEEEEcC---CCcEEEEEEC-CCc--EEEe-CEEEECCCCc
Confidence 3468999999 899997752 3456666653 453 4677 7999999864
No 145
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=52.52 E-value=31 Score=27.99 Aligned_cols=55 Identities=25% Similarity=0.352 Sum_probs=36.4
Q ss_pred eEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcccCCchhhhcccc
Q psy8943 29 LHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQLLMVSGGS 90 (134)
Q Consensus 29 l~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai~tP~lLl~SGig 90 (134)
.+|..++.|+++.++.. .+. ..|... +|. .+.+ +.||+|.|....|.+....|+.
T Consensus 111 ~~i~~~~~V~~~~~~~~--~~~-w~V~~~-~G~--~~~a-d~vV~AtG~~s~p~~p~i~G~~ 165 (542)
T 1w4x_A 111 SGITFHTTVTAAAFDEA--TNT-WTVDTN-HGD--RIRA-RYLIMASGQLSVPQLPNFPGLK 165 (542)
T ss_dssp GGEECSCCEEEEEEETT--TTE-EEEEET-TCC--EEEE-EEEEECCCSCCCCCCCCCTTGG
T ss_pred ceEEcCcEEEEEEEcCC--CCe-EEEEEC-CCC--EEEe-CEEEECcCCCCCCCCCCCCCcc
Confidence 56888999999988631 122 223332 453 4667 7999999988888765544543
No 146
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=52.31 E-value=20 Score=28.31 Aligned_cols=50 Identities=16% Similarity=0.243 Sum_probs=32.1
Q ss_pred CCCeEEEccceEEEEEeccCCCCCeEEEEEEEe--CCeEEEEEeceEEEecCCcccCCchhh
Q psy8943 26 RKNLHIAMETQALRLLFDKSGPVPKAVGIEILR--DGRKHIIRAKKEIISSAGAINSPQLLM 85 (134)
Q Consensus 26 ~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~--~g~~~~~~a~~~vIlaaGai~tP~lLl 85 (134)
..+++++.++.|++|..+. . .|.+.+ ++....+.. +.+|+|.|+ .|..+.
T Consensus 78 ~~gi~~~~~~~V~~id~~~----~---~v~~~~~~~g~~~~~~~-d~lviAtG~--~p~~p~ 129 (472)
T 3iwa_A 78 NKDVEALVETRAHAIDRAA----H---TVEIENLRTGERRTLKY-DKLVLALGS--KANRPP 129 (472)
T ss_dssp ---CEEECSEEEEEEETTT----T---EEEEEETTTCCEEEEEC-SEEEECCCE--EECCCS
T ss_pred hcCcEEEECCEEEEEECCC----C---EEEEeecCCCCEEEEEC-CEEEEeCCC--CcCCCC
Confidence 4678999999999997652 2 233433 465556777 789999997 344443
No 147
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=51.73 E-value=26 Score=28.06 Aligned_cols=58 Identities=12% Similarity=0.214 Sum_probs=37.5
Q ss_pred hcCCCeEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcccCCc-h-hhhccc
Q psy8943 24 RLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQ-L-LMVSGG 89 (134)
Q Consensus 24 ~~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai~tP~-l-Ll~SGi 89 (134)
+...+++|++++.|++|.-+. +....|.+. +|. .+.+ +.||+|.|..-... | |..+|+
T Consensus 245 l~~~GV~i~~~~~v~~i~~~~----~~~~~v~~~-~G~--~i~~-D~vv~a~G~~p~~~~L~l~~~gl 304 (495)
T 2wpf_A 245 LTANGIEIMTNENPAKVSLNT----DGSKHVTFE-SGK--TLDV-DVVMMAIGRIPRTNDLQLGNVGV 304 (495)
T ss_dssp HHHTTCEEEESCCEEEEEECT----TSCEEEEET-TSC--EEEE-SEEEECSCEEECCGGGTGGGTTC
T ss_pred HHhCCCEEEeCCEEEEEEEcC----CceEEEEEC-CCc--EEEc-CEEEECCCCcccccccchhhcCc
Confidence 345689999999999986541 122344443 554 4667 79999999765554 3 333454
No 148
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=51.57 E-value=20 Score=30.61 Aligned_cols=47 Identities=17% Similarity=0.089 Sum_probs=31.9
Q ss_pred hcCCCeEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCC
Q psy8943 24 RLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAG 76 (134)
Q Consensus 24 ~~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaG 76 (134)
+...+.+|++++.|.+|+++. +.++++||. ..+|.. +.| +.||..+.
T Consensus 388 ~~~~Gg~i~l~~~V~~I~~~~--~~g~v~gV~-~~~Ge~--i~A-~~VVs~~~ 434 (650)
T 1vg0_A 388 CAVFGGIYCLRHSVQCLVVDK--ESRKCKAVI-DQFGQR--IIS-KHFIIEDS 434 (650)
T ss_dssp HHHTTCEEESSCCEEEEEEET--TTCCEEEEE-ETTSCE--EEC-SEEEEEGG
T ss_pred HHHcCCEEEeCCEeeEEEEeC--CCCeEEEEE-eCCCCE--EEc-CEEEEChh
Confidence 345678999999999999872 116898887 334643 566 56665433
No 149
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=51.46 E-value=18 Score=29.91 Aligned_cols=47 Identities=15% Similarity=0.130 Sum_probs=31.9
Q ss_pred CCCeEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcc
Q psy8943 26 RKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAI 78 (134)
Q Consensus 26 ~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai 78 (134)
..+++|+.++.|+.|..+. +.++ |.+...+...++++ +.||.|.|+-
T Consensus 160 ~~gv~i~~~~~v~~l~~~~----~~v~-v~~~~~~G~~~~~a-~~vV~ADG~~ 206 (570)
T 3fmw_A 160 EAGAEIPRGHEVTRLRQDA----EAVE-VTVAGPSGPYPVRA-RYGVGCDGGR 206 (570)
T ss_dssp HHTEECCBSCEEEECCBCS----SCEE-EEEEETTEEEEEEE-SEEEECSCSS
T ss_pred hCCCEEEeCCEEEEEEEcC----CeEE-EEEEeCCCcEEEEe-CEEEEcCCCC
Confidence 3479999999999987652 2332 55544333356788 7888888864
No 150
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=51.15 E-value=22 Score=28.18 Aligned_cols=57 Identities=19% Similarity=0.099 Sum_probs=37.6
Q ss_pred eEEEccceEEEEEeccCCCCCeEEEEEEEe-CCeEEEEEeceEEEecCCcccCCch-hhhcccc
Q psy8943 29 LHIAMETQALRLLFDKSGPVPKAVGIEILR-DGRKHIIRAKKEIISSAGAINSPQL-LMVSGGS 90 (134)
Q Consensus 29 l~i~t~~~V~ri~~~~~~~~~~a~gV~~~~-~g~~~~~~a~~~vIlaaGai~tP~l-Ll~SGig 90 (134)
++|++++.|++|.-+. .+.+ .|.+.+ +|....+.+ +.||+|.|..-...| |...|+.
T Consensus 226 v~i~~~~~v~~i~~~~---~~~v-~v~~~~~~G~~~~i~~-D~vi~a~G~~p~~~l~l~~~gl~ 284 (466)
T 3l8k_A 226 LNIKFNSPVTEVKKIK---DDEY-EVIYSTKDGSKKSIFT-NSVVLAAGRRPVIPEGAREIGLS 284 (466)
T ss_dssp CCEECSCCEEEEEEEE---TTEE-EEEECCTTSCCEEEEE-SCEEECCCEEECCCTTTGGGTCC
T ss_pred EEEEECCEEEEEEEcC---CCcE-EEEEEecCCceEEEEc-CEEEECcCCCcccccchhhcCce
Confidence 8999999999987541 1233 255543 566556777 799999997655554 4445553
No 151
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=51.14 E-value=19 Score=29.49 Aligned_cols=54 Identities=11% Similarity=0.274 Sum_probs=33.7
Q ss_pred EEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcccCCchhhhcccc
Q psy8943 30 HIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQLLMVSGGS 90 (134)
Q Consensus 30 ~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai~tP~lLl~SGig 90 (134)
++..++.|+.+.++.. .....|... +|. .+.+ +.+|+|.|....|++....|+.
T Consensus 105 ~i~~~~~V~~~~~~~~---~~~w~V~~~-~G~--~~~a-d~lV~AtG~~s~p~~p~ipG~~ 158 (545)
T 3uox_A 105 HYRFNTRVTAARYVEN---DRLWEVTLD-NEE--VVTC-RFLISATGPLSASRMPDIKGID 158 (545)
T ss_dssp GEECSCCEEEEEEEGG---GTEEEEEET-TTE--EEEE-EEEEECCCSCBC---CCCTTGG
T ss_pred cEEECCEEEEEEEeCC---CCEEEEEEC-CCC--EEEe-CEEEECcCCCCCCcCCCCCCcc
Confidence 6788999999988732 122223322 554 4566 7999999988888876555554
No 152
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=50.97 E-value=24 Score=27.16 Aligned_cols=44 Identities=14% Similarity=0.154 Sum_probs=29.0
Q ss_pred hcCCCeEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCc
Q psy8943 24 RLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGA 77 (134)
Q Consensus 24 ~~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGa 77 (134)
++..+ +|.+++.|++|..+. +.++ |.+. +|. .+.+ +.||+|+|.
T Consensus 214 ~~~~g-~i~~~~~V~~i~~~~----~~v~-v~~~-~g~--~~~a-d~vi~a~~~ 257 (431)
T 3k7m_X 214 SQEIP-EIRLQTVVTGIDQSG----DVVN-VTVK-DGH--AFQA-HSVIVATPM 257 (431)
T ss_dssp HTTCS-CEESSCCEEEEECSS----SSEE-EEET-TSC--CEEE-EEEEECSCG
T ss_pred HhhCC-ceEeCCEEEEEEEcC----CeEE-EEEC-CCC--EEEe-CEEEEecCc
Confidence 34445 899999999997652 2332 3332 443 4677 799999983
No 153
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=50.96 E-value=19 Score=26.90 Aligned_cols=48 Identities=10% Similarity=0.045 Sum_probs=32.9
Q ss_pred CeEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcccCCchh
Q psy8943 28 NLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQLL 84 (134)
Q Consensus 28 nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai~tP~lL 84 (134)
+.+|.+++.|++|..+. +.++ |.+. +|.. +.+ +.||+|+.+-...+||
T Consensus 123 g~~i~~~~~V~~i~~~~----~~~~-v~~~-~g~~--~~a-d~vV~A~p~~~~~~ll 170 (342)
T 3qj4_A 123 GAEVYFRHRVTQINLRD----DKWE-VSKQ-TGSP--EQF-DLIVLTMPVPEILQLQ 170 (342)
T ss_dssp TCEEESSCCEEEEEECS----SSEE-EEES-SSCC--EEE-SEEEECSCHHHHTTCB
T ss_pred CCEEEeCCEEEEEEEcC----CEEE-EEEC-CCCE--EEc-CEEEECCCHHHHHHHh
Confidence 68999999999998762 2222 3332 4432 456 7999999876666666
No 154
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=49.53 E-value=17 Score=28.93 Aligned_cols=51 Identities=14% Similarity=0.217 Sum_probs=35.0
Q ss_pred hcCCCeEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcccCCch
Q psy8943 24 RLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQL 83 (134)
Q Consensus 24 ~~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai~tP~l 83 (134)
+.+.+++|++++.|++|..+. +.+ .|.+. +|. .+.+ +.||+|.|..-...+
T Consensus 242 l~~~Gv~i~~~~~V~~i~~~~----~~v-~v~~~-~g~--~i~a-D~Vi~A~G~~p~~~~ 292 (484)
T 3o0h_A 242 MVAKGISIIYEATVSQVQSTE----NCY-NVVLT-NGQ--TICA-DRVMLATGRVPNTTG 292 (484)
T ss_dssp HHHHTCEEESSCCEEEEEECS----SSE-EEEET-TSC--EEEE-SEEEECCCEEECCTT
T ss_pred HHHCCCEEEeCCEEEEEEeeC----CEE-EEEEC-CCc--EEEc-CEEEEeeCCCcCCCC
Confidence 345689999999999997652 233 44433 453 4666 799999997665555
No 155
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=49.33 E-value=59 Score=25.42 Aligned_cols=55 Identities=15% Similarity=0.265 Sum_probs=35.5
Q ss_pred cCCCeEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcccCCchhhhccc
Q psy8943 25 LRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQLLMVSGG 89 (134)
Q Consensus 25 ~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai~tP~lLl~SGi 89 (134)
.+.+++++.++.|++|..+. . . |.+........+.+ +.+|+|.|+ .|..+...|.
T Consensus 69 ~~~gi~~~~~~~V~~id~~~----~-~--v~v~~~~~~~~~~~-d~lviAtG~--~p~~p~i~g~ 123 (452)
T 3oc4_A 69 RRQKIQLLLNREVVAMDVEN----Q-L--IAWTRKEEQQWYSY-DKLILATGA--SQFSTQIRGS 123 (452)
T ss_dssp HHTTEEEECSCEEEEEETTT----T-E--EEEEETTEEEEEEC-SEEEECCCC--CBCCCCCBTT
T ss_pred HHCCCEEEECCEEEEEECCC----C-E--EEEEecCceEEEEc-CEEEECCCc--ccCCCCCCCC
Confidence 34679999999999997762 2 2 22223334456777 789999998 5555443333
No 156
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=49.22 E-value=33 Score=28.63 Aligned_cols=51 Identities=14% Similarity=0.310 Sum_probs=36.4
Q ss_pred hcCCCeEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcccCCchh
Q psy8943 24 RLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQLL 84 (134)
Q Consensus 24 ~~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai~tP~lL 84 (134)
+...++++++++.|++|. + + +|.+..+|....+.+ +.||+|.|..-...++
T Consensus 583 l~~~GV~v~~~~~v~~i~-~----~----~v~~~~~G~~~~i~~-D~Vi~a~G~~p~~~l~ 633 (671)
T 1ps9_A 583 LLSRGVKMIPGVSYQKID-D----D----GLHVVINGETQVLAV-DNVVICAGQEPNRALA 633 (671)
T ss_dssp HHHTTCEEECSCEEEEEE-T----T----EEEEEETTEEEEECC-SEEEECCCEEECCTTH
T ss_pred HHhcCCEEEeCcEEEEEe-C----C----eEEEecCCeEEEEeC-CEEEECCCccccHHHH
Confidence 345689999999999985 2 1 233335776667777 7999999977665555
No 157
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=48.66 E-value=35 Score=27.23 Aligned_cols=58 Identities=12% Similarity=0.151 Sum_probs=37.2
Q ss_pred hhcCCCeEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcccCCch--hhhccc
Q psy8943 23 IRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQL--LMVSGG 89 (134)
Q Consensus 23 ~~~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai~tP~l--Ll~SGi 89 (134)
.+...+++|++++.|++|.-+ ++.+ .|.. .++. .+.+ +.||+|+|..-...+ |...|+
T Consensus 232 ~l~~~GV~i~~~~~V~~i~~~----~~~v-~v~~-~~g~--~i~a-D~Vv~a~G~~p~~~~l~l~~~gl 291 (499)
T 1xdi_A 232 SFAERGVRLFKNARAASVTRT----GAGV-LVTM-TDGR--TVEG-SHALMTIGSVPNTSGLGLERVGI 291 (499)
T ss_dssp HHHHTTCEEETTCCEEEEEEC----SSSE-EEEE-TTSC--EEEE-SEEEECCCEEECCSSSCTTTTTC
T ss_pred HHHHCCCEEEeCCEEEEEEEe----CCEE-EEEE-CCCc--EEEc-CEEEECCCCCcCCCcCCchhcCc
Confidence 344568999999999999754 1222 2221 2443 4666 799999998766555 333454
No 158
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=48.08 E-value=32 Score=28.86 Aligned_cols=55 Identities=4% Similarity=0.053 Sum_probs=36.8
Q ss_pred hcCCCeEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcccCCchhhh
Q psy8943 24 RLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQLLMV 86 (134)
Q Consensus 24 ~~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai~tP~lLl~ 86 (134)
+...+++|++++.|++|.-+ + ..+.....+....+.+ +.||+|.|..-...++..
T Consensus 577 l~~~GV~i~~~~~V~~i~~~-----~--~~v~~~~~~~~~~i~a-D~VV~A~G~~p~~~l~~~ 631 (690)
T 3k30_A 577 LIENGVARVTDHAVVAVGAG-----G--VTVRDTYASIERELEC-DAVVMVTARLPREELYLD 631 (690)
T ss_dssp HHHTTCEEEESEEEEEEETT-----E--EEEEETTTCCEEEEEC-SEEEEESCEEECCHHHHH
T ss_pred HHHCCCEEEcCcEEEEEECC-----e--EEEEEccCCeEEEEEC-CEEEECCCCCCChHHHHH
Confidence 34568999999999998633 1 1222222455556777 799999998766655543
No 159
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=47.96 E-value=6.1 Score=31.04 Aligned_cols=50 Identities=14% Similarity=0.133 Sum_probs=33.4
Q ss_pred CCCeEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcccCCchh
Q psy8943 26 RKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQLL 84 (134)
Q Consensus 26 ~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai~tP~lL 84 (134)
..+.+|.+++.|++|..+. +.+..|. .++. .+.+ +.||+|+++-...+||
T Consensus 246 ~~g~~i~~~~~V~~i~~~~----~~~~~v~--~~~~--~~~a-d~vv~a~p~~~~~~ll 295 (477)
T 3nks_A 246 SRGVSVLRGQPVCGLSLQA----EGRWKVS--LRDS--SLEA-DHVISAIPASVLSELL 295 (477)
T ss_dssp HTTCEEECSCCCCEEEECG----GGCEEEE--CSSC--EEEE-SEEEECSCHHHHHHHS
T ss_pred hcCCEEEeCCEEEEEEEcC----CceEEEE--ECCe--EEEc-CEEEECCCHHHHHHhc
Confidence 3478999999999998762 2222343 2343 4667 7999999875555444
No 160
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=46.98 E-value=35 Score=26.82 Aligned_cols=51 Identities=16% Similarity=0.212 Sum_probs=33.6
Q ss_pred CCCeEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcccCCchh
Q psy8943 26 RKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQLL 84 (134)
Q Consensus 26 ~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai~tP~lL 84 (134)
+.+++++.++.|+.|..+. +...+.....+....+.. +.+|+|.|+- |+.+
T Consensus 69 ~~~i~~~~~~~V~~id~~~-----~~~~~~~~~~~~~~~~~y-d~lVIATGs~--p~~p 119 (437)
T 4eqs_A 69 RKQITVKTYHEVIAINDER-----QTVSVLNRKTNEQFEESY-DKLILSPGAS--ANSL 119 (437)
T ss_dssp HHCCEEEETEEEEEEETTT-----TEEEEEETTTTEEEEEEC-SEEEECCCEE--ECCC
T ss_pred hcCCEEEeCCeEEEEEccC-----cEEEEEeccCCceEEEEc-CEEEECCCCc--cccc
Confidence 4578999999999987652 332333333455556666 6899999973 4443
No 161
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=46.88 E-value=30 Score=27.54 Aligned_cols=53 Identities=13% Similarity=0.036 Sum_probs=35.9
Q ss_pred hhhcCCCeEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcccCCchh
Q psy8943 22 PIRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQLL 84 (134)
Q Consensus 22 ~~~~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai~tP~lL 84 (134)
..+...+++|++++.|++|.-+ +++..|.. ++. .+.+ +.||+|.|..-+..+|
T Consensus 244 ~~l~~~GV~i~~~~~v~~i~~~-----~~v~~v~~--~g~--~i~~-D~Vi~a~G~~p~~~ll 296 (490)
T 2bc0_A 244 KNMEEHGIQLAFGETVKEVAGN-----GKVEKIIT--DKN--EYDV-DMVILAVGFRPNTTLG 296 (490)
T ss_dssp HHHHTTTCEEEETCCEEEEECS-----SSCCEEEE--SSC--EEEC-SEEEECCCEEECCGGG
T ss_pred HHHHhCCeEEEeCCEEEEEEcC-----CcEEEEEE--CCc--EEEC-CEEEECCCCCcChHHH
Confidence 3345678999999999998632 33444443 443 4666 6999999976555554
No 162
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=46.54 E-value=58 Score=26.40 Aligned_cols=43 Identities=12% Similarity=0.179 Sum_probs=31.0
Q ss_pred EEccceEEEEEeccCCCCCeEEEEEEEe--CCeEEEEEeceEEEecCCccc
Q psy8943 31 IAMETQALRLLFDKSGPVPKAVGIEILR--DGRKHIIRAKKEIISSAGAIN 79 (134)
Q Consensus 31 i~t~~~V~ri~~~~~~~~~~a~gV~~~~--~g~~~~~~a~~~vIlaaGai~ 79 (134)
|..++.|+.|..+. +.++ |.+.+ +|...++++ +.||.|.|+-.
T Consensus 152 v~~~~~v~~~~~~~----~~v~-v~~~~~~~G~~~~i~a-~~vVgADG~~S 196 (549)
T 2r0c_A 152 LRTRSRLDSFEQRD----DHVR-ATITDLRTGATRAVHA-RYLVACDGASS 196 (549)
T ss_dssp EECSEEEEEEEECS----SCEE-EEEEETTTCCEEEEEE-EEEEECCCTTC
T ss_pred cccCcEEEEEEEeC----CEEE-EEEEECCCCCEEEEEe-CEEEECCCCCc
Confidence 89999999997762 2343 55665 365667888 78899888753
No 163
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=46.20 E-value=45 Score=29.61 Aligned_cols=59 Identities=15% Similarity=0.250 Sum_probs=39.9
Q ss_pred CCCeEEEccceEEEEEeccCCCCCeEEEEEEEe-----CC-------eEEEEEeceEEEecCCcc-cCCchhhh-ccc
Q psy8943 26 RKNLHIAMETQALRLLFDKSGPVPKAVGIEILR-----DG-------RKHIIRAKKEIISSAGAI-NSPQLLMV-SGG 89 (134)
Q Consensus 26 ~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~-----~g-------~~~~~~a~~~vIlaaGai-~tP~lLl~-SGi 89 (134)
..++++++++.+.+|..+ ++++++|++.+ +| ....+.+ +.||+|.|.. .++.|+.. +|+
T Consensus 382 ~~Gv~~~~~~~~~~i~~~----~g~v~~v~~~~~~~~~~g~~~~~~g~~~~i~a-D~Vi~A~G~~~~~~~l~~~~~gl 454 (1025)
T 1gte_A 382 EEKCEFLPFLSPRKVIVK----GGRIVAVQFVRTEQDETGKWNEDEDQIVHLKA-DVVISAFGSVLRDPKVKEALSPI 454 (1025)
T ss_dssp HTTCEEECSEEEEEEEEE----TTEEEEEEEEEEEECTTSCEEEEEEEEEEEEC-SEEEECSCEECCCHHHHHHTTTS
T ss_pred HcCCEEEeCCCceEEEcc----CCeEEEEEEEEeEEcCCCCcccCCCceEEEEC-CEEEECCCCCCCchhhhhcccCc
Confidence 468999999999998654 35788887652 22 3346677 7999999975 34455443 344
No 164
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=46.13 E-value=21 Score=27.81 Aligned_cols=54 Identities=17% Similarity=0.244 Sum_probs=38.3
Q ss_pred hcCCCeEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcccCCchhhhcccc
Q psy8943 24 RLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQLLMVSGGS 90 (134)
Q Consensus 24 ~~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai~tP~lLl~SGig 90 (134)
....+++|++++.|++|. + + +|.+. +|. .+.+ +.||+|.|..-+..+|..+|+.
T Consensus 197 l~~~GV~i~~~~~v~~i~-~-----~---~v~~~-~g~--~i~~-D~vi~a~G~~p~~~l~~~~gl~ 250 (408)
T 2gqw_A 197 HAAQGVDLRFERSVTGSV-D-----G---VVLLD-DGT--RIAA-DMVVVGIGVLANDALARAAGLA 250 (408)
T ss_dssp HHHTTCEEEESCCEEEEE-T-----T---EEEET-TSC--EEEC-SEEEECSCEEECCHHHHHHTCC
T ss_pred HHHcCcEEEeCCEEEEEE-C-----C---EEEEC-CCC--EEEc-CEEEECcCCCccHHHHHhCCCC
Confidence 345689999999999987 4 2 44443 453 4566 7999999987666676666654
No 165
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=45.92 E-value=29 Score=27.04 Aligned_cols=52 Identities=12% Similarity=0.096 Sum_probs=33.7
Q ss_pred hhhhhhcCCCeEEEccceEEEEEeccCCCCCeEEEEEEEe-CCeEEEEEeceEEEecCCcccC
Q psy8943 19 FLRPIRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILR-DGRKHIIRAKKEIISSAGAINS 80 (134)
Q Consensus 19 ~l~~~~~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~-~g~~~~~~a~~~vIlaaGai~t 80 (134)
.+...+.+.++++++++.|++|.-+ +|.+.+ ++....+.+ +.+|++.|....
T Consensus 205 ~l~~~l~~~GV~i~~~~~v~~v~~~---------~v~~~~~~~~g~~i~~-D~vv~a~G~~~~ 257 (430)
T 3h28_A 205 LVEDLFAERNIDWIANVAVKAIEPD---------KVIYEDLNGNTHEVPA-KFTMFMPSFQGP 257 (430)
T ss_dssp HHHHHHHHTTCEEECSCEEEEECSS---------EEEEECTTSCEEEEEC-SEEEEECEEECC
T ss_pred HHHHHHHHCCCEEEeCCEEEEEeCC---------eEEEEecCCCceEEee-eEEEECCCCccc
Confidence 3434445678999999999998422 244443 233456677 688888886543
No 166
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=45.04 E-value=39 Score=26.38 Aligned_cols=53 Identities=17% Similarity=0.114 Sum_probs=35.2
Q ss_pred hhhcCCCeEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcccCCchh
Q psy8943 22 PIRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQLL 84 (134)
Q Consensus 22 ~~~~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai~tP~lL 84 (134)
..+...+++|++++.|++|.-+ +++..|.. ++. .+.+ +.||+|.|..-...+|
T Consensus 199 ~~l~~~gv~i~~~~~v~~i~~~-----~~v~~v~~--~~~--~i~~-d~vi~a~G~~p~~~~~ 251 (447)
T 1nhp_A 199 EEMEANNITIATGETVERYEGD-----GRVQKVVT--DKN--AYDA-DLVVVAVGVRPNTAWL 251 (447)
T ss_dssp HHHHTTTEEEEESCCEEEEECS-----SBCCEEEE--SSC--EEEC-SEEEECSCEEESCGGG
T ss_pred HHHHhCCCEEEcCCEEEEEEcc-----CcEEEEEE--CCC--EEEC-CEEEECcCCCCChHHH
Confidence 3345678999999999998643 23334433 342 4667 7999999976554444
No 167
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=44.74 E-value=32 Score=26.59 Aligned_cols=47 Identities=6% Similarity=0.075 Sum_probs=31.2
Q ss_pred CeEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcccCCch
Q psy8943 28 NLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQL 83 (134)
Q Consensus 28 nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai~tP~l 83 (134)
+.+|.+++.|++|..+. +.. |.+..++. .+.+ +.||+|++.-...+|
T Consensus 226 g~~i~~~~~V~~i~~~~----~~~--v~v~~~~~--~~~a-d~VI~a~p~~~~~~l 272 (453)
T 2yg5_A 226 GDDVFLNAPVRTVKWNE----SGA--TVLADGDI--RVEA-SRVILAVPPNLYSRI 272 (453)
T ss_dssp GGGEECSCCEEEEEEET----TEE--EEEETTTE--EEEE-EEEEECSCGGGGGGS
T ss_pred CCcEEcCCceEEEEEeC----Cce--EEEEECCe--EEEc-CEEEEcCCHHHHhcC
Confidence 35899999999998762 231 33333553 4667 799999987544444
No 168
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=44.39 E-value=41 Score=27.03 Aligned_cols=63 Identities=11% Similarity=0.167 Sum_probs=39.5
Q ss_pred hhcCCCeEEEccceEEEEEeccCC---------------CCCeEEEEEEEeCCeEEEEEeceEEEecCCcccCCchhhhc
Q psy8943 23 IRLRKNLHIAMETQALRLLFDKSG---------------PVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQLLMVS 87 (134)
Q Consensus 23 ~~~~~nl~i~t~~~V~ri~~~~~~---------------~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai~tP~lLl~S 87 (134)
.+...++++++++.|++|.-+... .+++++ +.+ .+|. .+.+ +.||+|.|..-.+.++...
T Consensus 201 ~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~-~~g~--~i~~-D~vi~a~G~~p~~~l~~~~ 275 (565)
T 3ntd_A 201 AIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLS-LTL-SNGE--LLET-DLLIMAIGVRPETQLARDA 275 (565)
T ss_dssp HHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEE-EEE-TTSC--EEEE-SEEEECSCEEECCHHHHHH
T ss_pred HHHHCCCEEEeCCeEEEEeccccccccccccccccccccCCCcEE-EEE-cCCC--EEEc-CEEEECcCCccchHHHHhC
Confidence 344578999999999999752000 012222 222 3454 4666 7999999987666666555
Q ss_pred ccc
Q psy8943 88 GGS 90 (134)
Q Consensus 88 Gig 90 (134)
|+.
T Consensus 276 g~~ 278 (565)
T 3ntd_A 276 GLA 278 (565)
T ss_dssp TCC
T ss_pred Ccc
Confidence 553
No 169
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=44.17 E-value=36 Score=26.65 Aligned_cols=43 Identities=7% Similarity=0.236 Sum_probs=29.2
Q ss_pred cCCCeEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCc
Q psy8943 25 LRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGA 77 (134)
Q Consensus 25 ~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGa 77 (134)
...+++++.++.|+.+..+ . ..+..++....+.. +.+|+|.|+
T Consensus 70 ~~~gi~v~~~~~v~~i~~~-----~----~~v~~~~g~~~~~~-d~lviAtG~ 112 (449)
T 3kd9_A 70 KKRGIDLHLNAEVIEVDTG-----Y----VRVRENGGEKSYEW-DYLVFANGA 112 (449)
T ss_dssp HHTTCEEETTCEEEEECSS-----E----EEEECSSSEEEEEC-SEEEECCCE
T ss_pred HhcCcEEEecCEEEEEecC-----C----CEEEECCceEEEEc-CEEEECCCC
Confidence 3568999999999998543 1 22233443345667 789999996
No 170
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=43.87 E-value=31 Score=27.37 Aligned_cols=60 Identities=13% Similarity=0.107 Sum_probs=38.3
Q ss_pred hhhcCCCeEEEccceEEEEEeccCCCCCeEEEEEEEe-C--CeEEEEEeceEEEecCCcccCCchh--hhccc
Q psy8943 22 PIRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILR-D--GRKHIIRAKKEIISSAGAINSPQLL--MVSGG 89 (134)
Q Consensus 22 ~~~~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~-~--g~~~~~~a~~~vIlaaGai~tP~lL--l~SGi 89 (134)
..+...+++|++++.|++|.-+. + ...|.+.+ . +. .+.+ +.||+|.|..-...+| ...|+
T Consensus 234 ~~l~~~gV~i~~~~~v~~i~~~~----~-~~~v~~~~~~~~g~--~~~~-D~vv~a~G~~p~~~~l~~~~~gl 298 (482)
T 1ojt_A 234 KQNEYRFDNIMVNTKTVAVEPKE----D-GVYVTFEGANAPKE--PQRY-DAVLVAAGRAPNGKLISAEKAGV 298 (482)
T ss_dssp HHHGGGEEEEECSCEEEEEEEET----T-EEEEEEESSSCCSS--CEEE-SCEEECCCEEECGGGTTGGGTTC
T ss_pred HHHHhcCCEEEECCEEEEEEEcC----C-eEEEEEeccCCCce--EEEc-CEEEECcCCCcCCCCCChhhcCc
Confidence 33455689999999999986541 2 23455543 1 33 3456 7899999987655554 33454
No 171
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=43.37 E-value=27 Score=27.24 Aligned_cols=50 Identities=16% Similarity=0.156 Sum_probs=31.1
Q ss_pred eEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcccCCchh
Q psy8943 29 LHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQLL 84 (134)
Q Consensus 29 l~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai~tP~lL 84 (134)
.+|.+++.|++|..+. +. ..|.+.+......+.+ +.||+|++.-...+||
T Consensus 250 ~~i~~~~~V~~i~~~~----~~-~~v~~~~~~~g~~~~a-d~vV~a~~~~~~~~ll 299 (478)
T 2ivd_A 250 DAAHVGARVEGLARED----GG-WRLIIEEHGRRAELSV-AQVVLAAPAHATAKLL 299 (478)
T ss_dssp GGEESSEEEEEEECC------C-CEEEEEETTEEEEEEC-SEEEECSCHHHHHHHH
T ss_pred hhEEcCCEEEEEEecC----Ce-EEEEEeecCCCceEEc-CEEEECCCHHHHHHHh
Confidence 4799999999998762 22 3455432111135677 7999999875444443
No 172
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=43.28 E-value=48 Score=24.28 Aligned_cols=54 Identities=20% Similarity=0.196 Sum_probs=33.2
Q ss_pred cCCCeEEEccceEEEEEeccCCCCCeEEEEEEEe-CCeEEEEEeceEEEecCCccc-CCchhhhcc
Q psy8943 25 LRKNLHIAMETQALRLLFDKSGPVPKAVGIEILR-DGRKHIIRAKKEIISSAGAIN-SPQLLMVSG 88 (134)
Q Consensus 25 ~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~-~g~~~~~~a~~~vIlaaGai~-tP~lLl~SG 88 (134)
.+.+++++.++.|++|..+. + .+.+.. ++. .+.+ +.+|+|.|+-. .|+.+...|
T Consensus 76 ~~~~~~~~~~~~v~~i~~~~----~---~~~v~~~~g~--~~~~-~~lv~AtG~~~~~p~~~~i~g 131 (335)
T 2zbw_A 76 APFNPVYSLGERAETLEREG----D---LFKVTTSQGN--AYTA-KAVIIAAGVGAFEPRRIGAPG 131 (335)
T ss_dssp GGGCCEEEESCCEEEEEEET----T---EEEEEETTSC--EEEE-EEEEECCTTSEEEECCCCCTT
T ss_pred HHcCCEEEeCCEEEEEEECC----C---EEEEEECCCC--EEEe-CEEEECCCCCCCCCCCCCCCC
Confidence 34468899999999987652 2 233333 343 3566 79999999732 344443333
No 173
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=43.13 E-value=21 Score=28.64 Aligned_cols=56 Identities=14% Similarity=0.133 Sum_probs=38.6
Q ss_pred CCCeEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcccCCchhhhcccc
Q psy8943 26 RKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQLLMVSGGS 90 (134)
Q Consensus 26 ~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai~tP~lLl~SGig 90 (134)
+.+++|++++.|++|.-+ +++.+|.. .+| ..+.+ +.||+|+|..-...|+..+|+.
T Consensus 269 ~~GV~v~~~~~v~~i~~~-----~~v~~v~~-~~g--~~i~a-D~Vv~a~G~~p~~~l~~~~g~~ 324 (493)
T 1y56_A 269 RWGIDYVHIPNVKRVEGN-----EKVERVID-MNN--HEYKV-DALIFADGRRPDINPITQAGGK 324 (493)
T ss_dssp HHTCEEEECSSEEEEECS-----SSCCEEEE-TTC--CEEEC-SEEEECCCEEECCHHHHHTTCC
T ss_pred hCCcEEEeCCeeEEEecC-----CceEEEEe-CCC--eEEEe-CEEEECCCcCcCchHHHhcCCC
Confidence 457999999999998643 23445543 244 34667 7999999987666677667663
No 174
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=42.44 E-value=50 Score=25.27 Aligned_cols=50 Identities=12% Similarity=0.029 Sum_probs=32.5
Q ss_pred hcCCCeEEEccceEEEEEeccCCCCCeEEEEEEEe-CCeEEEEEeceEEEecCCcccCCchh
Q psy8943 24 RLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILR-DGRKHIIRAKKEIISSAGAINSPQLL 84 (134)
Q Consensus 24 ~~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~-~g~~~~~~a~~~vIlaaGai~tP~lL 84 (134)
..+.+++++.+ .|+++..+. . .|.+.+ .+....+.+ +.+|+|.|+ .|...
T Consensus 66 ~~~~gv~~~~~-~v~~i~~~~----~---~V~~~~g~~~~~~~~~-d~lViAtG~--~~~~~ 116 (409)
T 3h8l_A 66 LPEKGIQFQEG-TVEKIDAKS----S---MVYYTKPDGSMAEEEY-DYVIVGIGA--HLATE 116 (409)
T ss_dssp TGGGTCEEEEC-EEEEEETTT----T---EEEEECTTSCEEEEEC-SEEEECCCC--EECGG
T ss_pred HhhCCeEEEEe-eEEEEeCCC----C---EEEEccCCcccceeeC-CEEEECCCC--CcCcc
Confidence 34567899887 888887652 2 244444 233456777 799999997 44443
No 175
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=42.12 E-value=74 Score=25.56 Aligned_cols=58 Identities=3% Similarity=-0.024 Sum_probs=35.9
Q ss_pred hcCCCeEEEccceEEEEEeccCCCCCeEEEEEEEe-CC-eEEEEEeceEEEecCCcccCCch
Q psy8943 24 RLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILR-DG-RKHIIRAKKEIISSAGAINSPQL 83 (134)
Q Consensus 24 ~~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~-~g-~~~~~~a~~~vIlaaGai~tP~l 83 (134)
+...+++|++++.|++|.-...+..+ ...|.+.. ++ ....+.+ +.||+|.|..-...+
T Consensus 260 l~~~GV~v~~~~~v~~v~~~~~~~~~-~~~v~~~~~~g~~~~~~~~-D~vi~a~G~~p~~~~ 319 (519)
T 3qfa_A 260 MEEHGIKFIRQFVPIKVEQIEAGTPG-RLRVVAQSTNSEEIIEGEY-NTVMLAIGRDACTRK 319 (519)
T ss_dssp HHHTTCEEEESEEEEEEEEEECCTTC-EEEEEEEESSSSCEEEEEE-SEEEECSCEEESCSS
T ss_pred HHHCCCEEEeCCeEEEEEEccCCCCc-eEEEEEEECCCcEEEEEEC-CEEEEecCCcccCCC
Confidence 44578999999999888643211112 22344443 34 3355667 699999997655544
No 176
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=42.09 E-value=51 Score=26.33 Aligned_cols=61 Identities=16% Similarity=0.147 Sum_probs=38.3
Q ss_pred hhcCCCeEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcccCCc-h-hhhcccc
Q psy8943 23 IRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQ-L-LMVSGGS 90 (134)
Q Consensus 23 ~~~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai~tP~-l-Ll~SGig 90 (134)
.+...+++|++++.|++|.-+. ++. ..|.+. +|.. .+.+ +.||+|.|..-.+. | |..+|+.
T Consensus 226 ~l~~~gv~i~~~~~v~~i~~~~---~~~-~~v~~~-~g~~-~~~~-D~vi~a~G~~p~~~~l~~~~~g~~ 288 (500)
T 1onf_A 226 DMKKNNINIVTFADVVEIKKVS---DKN-LSIHLS-DGRI-YEHF-DHVIYCVGRSPDTENLKLEKLNVE 288 (500)
T ss_dssp HHHHTTCEEECSCCEEEEEESS---TTC-EEEEET-TSCE-EEEE-SEEEECCCBCCTTTTSSCTTTTCC
T ss_pred HHHhCCCEEEECCEEEEEEEcC---Cce-EEEEEC-CCcE-EEEC-CEEEECCCCCcCCCCCCchhcCcc
Confidence 3445689999999999986541 122 234433 5543 3666 79999999765543 3 3445553
No 177
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=41.70 E-value=55 Score=24.35 Aligned_cols=57 Identities=16% Similarity=0.184 Sum_probs=35.5
Q ss_pred hcCCCeEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCccc-CCchhhhcc
Q psy8943 24 RLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAIN-SPQLLMVSG 88 (134)
Q Consensus 24 ~~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai~-tP~lLl~SG 88 (134)
....+++++.++.|++|..+. ++.. .|.. .++. .+.+ +.+|+|.|+-. .|+.+...|
T Consensus 84 ~~~~~~~~~~~~~v~~i~~~~---~~~~-~v~~-~~g~--~~~~-~~li~AtG~~~~~~~~~~i~g 141 (360)
T 3ab1_A 84 AERYNPDVVLNETVTKYTKLD---DGTF-ETRT-NTGN--VYRS-RAVLIAAGLGAFEPRKLPQLG 141 (360)
T ss_dssp HHTTCCEEECSCCEEEEEECT---TSCE-EEEE-TTSC--EEEE-EEEEECCTTCSCCBCCCGGGC
T ss_pred HHHhCCEEEcCCEEEEEEECC---CceE-EEEE-CCCc--EEEe-eEEEEccCCCcCCCCCCCCCC
Confidence 345578999999999997752 2211 2222 2443 4566 78999999854 466554444
No 178
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=40.84 E-value=15 Score=26.97 Aligned_cols=53 Identities=15% Similarity=0.088 Sum_probs=30.6
Q ss_pred hhhhhhcCCCeEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcc
Q psy8943 19 FLRPIRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAI 78 (134)
Q Consensus 19 ~l~~~~~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai 78 (134)
++.....+.+++++.++ |+.+..+. ..+ .+.....+....+.+ +.+|+|.|+-
T Consensus 89 ~~~~~~~~~gv~i~~~~-v~~i~~~~----~~~-~v~~~~~~~~~~~~~-d~vvlAtG~~ 141 (338)
T 3itj_A 89 RMREQSTKFGTEIITET-VSKVDLSS----KPF-KLWTEFNEDAEPVTT-DAIILATGAS 141 (338)
T ss_dssp HHHHHHHHTTCEEECSC-EEEEECSS----SSE-EEEETTCSSSCCEEE-EEEEECCCEE
T ss_pred HHHHHHHHcCCEEEEeE-EEEEEEcC----CEE-EEEEEecCCCcEEEe-CEEEECcCCC
Confidence 33333445689999998 99887652 222 222221111223455 7899999983
No 179
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=39.92 E-value=77 Score=25.16 Aligned_cols=51 Identities=20% Similarity=0.274 Sum_probs=36.9
Q ss_pred CCeEEEccceEEEEEeccCCCCC-eEEEEEEEe--------------CCeEEEEEeceEEEecCCcccCC
Q psy8943 27 KNLHIAMETQALRLLFDKSGPVP-KAVGIEILR--------------DGRKHIIRAKKEIISSAGAINSP 81 (134)
Q Consensus 27 ~nl~i~t~~~V~ri~~~~~~~~~-~a~gV~~~~--------------~g~~~~~~a~~~vIlaaGai~tP 81 (134)
.+++|.+++.+.+|.-+ +++ ++++|.+.. +|....+.+ ..||+|.|..-.+
T Consensus 270 ~gv~~~~~~~~~~i~~~---~~~~~v~~v~~~~~~l~~~~~~~~~~~~g~~~~i~~-d~Vi~a~G~~p~~ 335 (460)
T 1cjc_A 270 RAWGLRFFRSPQQVLPS---PDGRRAAGIRLAVTRLEGIGEATRAVPTGDVEDLPC-GLVLSSIGYKSRP 335 (460)
T ss_dssp EEEEEECSEEEEEEEEC---TTSSSEEEEEEEEEEEESSGGGCEEEEEEEEEEEEC-SEEEECCCEECCC
T ss_pred ceEEEECCCChheEEcC---CCCceEEEEEEEEEEEccccCCCcccCCCceEEEEc-CEEEECCCCCCCC
Confidence 67999999999998643 124 687887753 244456777 6899999977665
No 180
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=39.51 E-value=43 Score=27.37 Aligned_cols=47 Identities=21% Similarity=0.258 Sum_probs=31.4
Q ss_pred hhhhhhhhcCCCeEEEc--cceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcc
Q psy8943 17 KAFLRPIRLRKNLHIAM--ETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAI 78 (134)
Q Consensus 17 ~~~l~~~~~~~nl~i~t--~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai 78 (134)
..|+ ++.+++|++|.. ...|++|.-+ ||... +| .+.+ +.||+|+|--
T Consensus 342 ~~y~-~al~~~nV~lv~~~~~~I~~it~~---------gv~~~-dG---~~~~-D~IV~ATGf~ 390 (545)
T 3uox_A 342 TNYY-ETYNRDNVHLVDIREAPIQEVTPE---------GIKTA-DA---AYDL-DVIIYATGFD 390 (545)
T ss_dssp SSHH-HHTTSTTEEEEETTTSCEEEEETT---------EEEES-SC---EEEC-SEEEECCCCB
T ss_pred ccHH-HHhcCCCEEEEecCCCCceEEccC---------eEEeC-CC---eeec-CEEEECCccc
Confidence 3455 556789999996 7788887432 44432 55 3556 7899999854
No 181
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=39.49 E-value=33 Score=26.96 Aligned_cols=58 Identities=14% Similarity=0.149 Sum_probs=36.7
Q ss_pred hcCCCeEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcccCCc-h-hhhccc
Q psy8943 24 RLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQ-L-LMVSGG 89 (134)
Q Consensus 24 ~~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai~tP~-l-Ll~SGi 89 (134)
+...++++++++.|++|.-+. ++ ...|.+. +|. .+.+ +.||+|.|..-... | |..+|+
T Consensus 218 l~~~Gv~i~~~~~v~~i~~~~---~~-~~~v~~~-~g~--~i~~-D~vv~a~G~~p~~~~l~~~~~gl 277 (450)
T 1ges_A 218 MNAEGPQLHTNAIPKAVVKNT---DG-SLTLELE-DGR--SETV-DCLIWAIGREPANDNINLEAAGV 277 (450)
T ss_dssp HHHHSCEEECSCCEEEEEECT---TS-CEEEEET-TSC--EEEE-SEEEECSCEEESCTTSCHHHHTC
T ss_pred HHHCCCEEEeCCEEEEEEEeC---Cc-EEEEEEC-CCc--EEEc-CEEEECCCCCcCCCCCCchhcCc
Confidence 345689999999999986542 12 2234433 454 4666 79999999765544 3 333454
No 182
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=38.53 E-value=17 Score=29.17 Aligned_cols=47 Identities=15% Similarity=0.282 Sum_probs=31.2
Q ss_pred CCCeEEEccceEEEEEeccCCCCCeEEEEEEEe-----------------CCeEEEEEeceEEEecCCcc
Q psy8943 26 RKNLHIAMETQALRLLFDKSGPVPKAVGIEILR-----------------DGRKHIIRAKKEIISSAGAI 78 (134)
Q Consensus 26 ~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~-----------------~g~~~~~~a~~~vIlaaGai 78 (134)
..+++++.++.+.+|.-+ +++++|.+.. +|....+.+ +.||+|.|.-
T Consensus 314 ~~Gv~~~~~~~~~~i~~~-----g~v~~v~~~~~~~~~~d~~G~~~~~~~~g~~~~i~a-D~Vi~A~G~~ 377 (456)
T 2vdc_G 314 EEGVEFIWQAAPEGFTGD-----TVVTGVRAVRIHLGVADATGRQTPQVIEGSEFTVQA-DLVIKALGFE 377 (456)
T ss_dssp HTTCEEECCSSSCCEEEE-----EEEETTEEEEEEEEEEEECTTCCEEEEEEEEEEEEC-SEEEECSCEE
T ss_pred HCCCEEEeCCCceEEeCC-----CcEEEEEEEEEEecccCCcCCccccccCCcEEEEEC-CEEEECCCCC
Confidence 457899999988887532 3555554431 233456777 7999999974
No 183
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=38.17 E-value=28 Score=26.72 Aligned_cols=46 Identities=9% Similarity=-0.057 Sum_probs=30.5
Q ss_pred eEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcccCCchh
Q psy8943 29 LHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQLL 84 (134)
Q Consensus 29 l~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai~tP~lL 84 (134)
.+|.+++.|++|..+ +++++ |... +|. +.+ +.||+|+++-...++|
T Consensus 218 ~~v~~~~~V~~i~~~----~~~v~-v~~~-~g~---~~a-d~Vv~a~~~~~~~~~l 263 (424)
T 2b9w_A 218 HPAERNVDITRITRE----DGKVH-IHTT-DWD---RES-DVLVLTVPLEKFLDYS 263 (424)
T ss_dssp SCCBCSCCEEEEECC----TTCEE-EEES-SCE---EEE-SEEEECSCHHHHTTSB
T ss_pred ceEEcCCEEEEEEEE----CCEEE-EEEC-CCe---EEc-CEEEECCCHHHHhhcc
Confidence 468999999999865 23443 4332 442 567 7999999986544443
No 184
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=38.08 E-value=29 Score=26.95 Aligned_cols=52 Identities=13% Similarity=0.261 Sum_probs=34.5
Q ss_pred cCCCeEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcccCCchhhhccc
Q psy8943 25 LRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQLLMVSGG 89 (134)
Q Consensus 25 ~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai~tP~lLl~SGi 89 (134)
.+.++++++++.|++|..+. .. |.. .+|. .+.. +.+|+|.|+ .|+.+...|.
T Consensus 73 ~~~~i~~~~~~~V~~id~~~----~~---v~~-~~g~--~~~y-d~lvlAtG~--~p~~p~i~G~ 124 (385)
T 3klj_A 73 EKNNIKVITSEFATSIDPNN----KL---VTL-KSGE--KIKY-EKLIIASGS--IANKIKVPHA 124 (385)
T ss_dssp HHTTCEEECSCCEEEEETTT----TE---EEE-TTSC--EEEC-SEEEECCCE--EECCCCCTTC
T ss_pred HHCCCEEEeCCEEEEEECCC----CE---EEE-CCCC--EEEC-CEEEEecCC--CcCCCCCCCC
Confidence 34689999999999997762 22 222 2454 3455 799999997 5665544444
No 185
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=37.66 E-value=28 Score=26.68 Aligned_cols=57 Identities=18% Similarity=0.193 Sum_probs=37.8
Q ss_pred hhhhhcCCCeEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcccCCchhhhcccc
Q psy8943 20 LRPIRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQLLMVSGGS 90 (134)
Q Consensus 20 l~~~~~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai~tP~lLl~SGig 90 (134)
+...+...++++++++.|+++.. . +|.+. +|. +.+ +.||+|.|..-...+|..+|+.
T Consensus 189 l~~~l~~~gV~i~~~~~v~~i~~------~---~v~~~-~g~---i~~-D~vi~a~G~~p~~~ll~~~gl~ 245 (367)
T 1xhc_A 189 IKDMLEETGVKFFLNSELLEANE------E---GVLTN-SGF---IEG-KVKICAIGIVPNVDLARRSGIH 245 (367)
T ss_dssp HHHHHHHTTEEEECSCCEEEECS------S---EEEET-TEE---EEC-SCEEEECCEEECCHHHHHTTCC
T ss_pred HHHHHHHCCCEEEcCCEEEEEEe------e---EEEEC-CCE---EEc-CEEEECcCCCcCHHHHHhCCCC
Confidence 33334456899999999999851 1 34442 442 666 7899999977665666656654
No 186
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=37.24 E-value=51 Score=25.89 Aligned_cols=50 Identities=12% Similarity=0.107 Sum_probs=33.5
Q ss_pred hcCCCeEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcccCCch
Q psy8943 24 RLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQL 83 (134)
Q Consensus 24 ~~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai~tP~l 83 (134)
+...+++|++++.|++|.-+ ++ ...|.. ++. .+.+ +.||+|+|..-...+
T Consensus 226 l~~~Gv~i~~~~~v~~i~~~----~~-~~~v~~--~~~--~i~a-D~Vv~a~G~~p~~~~ 275 (467)
T 1zk7_A 226 FRAEGIEVLEHTQASQVAHM----DG-EFVLTT--THG--ELRA-DKLLVATGRTPNTRS 275 (467)
T ss_dssp HHHTTCEEETTCCEEEEEEE----TT-EEEEEE--TTE--EEEE-SEEEECSCEEESCTT
T ss_pred HHhCCCEEEcCCEEEEEEEe----CC-EEEEEE--CCc--EEEc-CEEEECCCCCcCCCc
Confidence 34568999999999999654 12 223332 342 5677 799999998655443
No 187
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=37.12 E-value=63 Score=25.23 Aligned_cols=50 Identities=12% Similarity=0.236 Sum_probs=33.1
Q ss_pred cCCCeEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcccCCch
Q psy8943 25 LRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQL 83 (134)
Q Consensus 25 ~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai~tP~l 83 (134)
...+++|++++.|++|.-+. +. ..|.+. ++. .+.+ +.||+|.|..-...+
T Consensus 219 ~~~Gv~i~~~~~V~~i~~~~----~~-v~v~~~-~g~--~i~~-D~vv~A~G~~p~~~~ 268 (455)
T 2yqu_A 219 KKQGLTIRTGVRVTAVVPEA----KG-ARVELE-GGE--VLEA-DRVLVAVGRRPYTEG 268 (455)
T ss_dssp HHHTCEEECSCCEEEEEEET----TE-EEEEET-TSC--EEEE-SEEEECSCEEECCTT
T ss_pred HHCCCEEEECCEEEEEEEeC----CE-EEEEEC-CCe--EEEc-CEEEECcCCCcCCCC
Confidence 34589999999999997552 22 223322 443 4566 799999998755554
No 188
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=36.94 E-value=57 Score=25.90 Aligned_cols=49 Identities=18% Similarity=0.257 Sum_probs=35.3
Q ss_pred CCeEEEccceEEEEEeccCCCCCeEEEEEEEe---------------CCeEEEEEeceEEEecCCcccCC
Q psy8943 27 KNLHIAMETQALRLLFDKSGPVPKAVGIEILR---------------DGRKHIIRAKKEIISSAGAINSP 81 (134)
Q Consensus 27 ~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~---------------~g~~~~~~a~~~vIlaaGai~tP 81 (134)
.+++|..++.+.+|.-+ +++.+|.+.. +|....+.+ ..||+|.|..-+|
T Consensus 265 ~gv~i~~~~~~~~i~~~-----~~v~~v~~~~~~~~~~~~~~~~~~~~g~~~~i~~-d~vi~a~G~~p~~ 328 (456)
T 1lqt_A 265 RRMVFRFLTSPIEIKGK-----RKVERIVLGRNELVSDGSGRVAAKDTGEREELPA-QLVVRSVGYRGVP 328 (456)
T ss_dssp EEEEEECSEEEEEEECS-----SSCCEEEEEEEEEEECSSSSEEEEEEEEEEEEEC-SEEEECSCEECCC
T ss_pred ceEEEEeCCCCeEEecC-----CcEeEEEEEEEEecCCCcccccccCCCceEEEEc-CEEEEccccccCC
Confidence 57999999999998633 3566666652 344456777 7999999987666
No 189
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=36.21 E-value=46 Score=27.05 Aligned_cols=57 Identities=14% Similarity=0.168 Sum_probs=39.2
Q ss_pred hhcCCCeEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcccCCchhhhcccc
Q psy8943 23 IRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQLLMVSGGS 90 (134)
Q Consensus 23 ~~~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai~tP~lLl~SGig 90 (134)
.+...+++|++++.|++|.-+. + +|.+. +|. .+.+ +.||+|.|..-...+|...|+.
T Consensus 237 ~l~~~GV~i~~~~~v~~i~~~~----~---~v~~~-~g~--~i~~-D~Vi~a~G~~p~~~~l~~~g~~ 293 (588)
T 3ics_A 237 HMKNHDVELVFEDGVDALEENG----A---VVRLK-SGS--VIQT-DMLILAIGVQPESSLAKGAGLA 293 (588)
T ss_dssp HHHHTTCEEECSCCEEEEEGGG----T---EEEET-TSC--EEEC-SEEEECSCEEECCHHHHHTTCC
T ss_pred HHHHcCCEEEECCeEEEEecCC----C---EEEEC-CCC--EEEc-CEEEEccCCCCChHHHHhcCce
Confidence 3445789999999999986541 2 34443 443 4566 7999999987666666656654
No 190
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=35.77 E-value=66 Score=25.34 Aligned_cols=51 Identities=14% Similarity=0.154 Sum_probs=34.1
Q ss_pred hcCCCeEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcccCCc
Q psy8943 24 RLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQ 82 (134)
Q Consensus 24 ~~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai~tP~ 82 (134)
+...++++++++.|++|.-+. +. ..|.+. +|.. .+.+ +.||+|.|..-...
T Consensus 217 l~~~gv~i~~~~~v~~i~~~~----~~-~~v~~~-~G~~-~i~~-D~vv~a~G~~p~~~ 267 (463)
T 2r9z_A 217 MHAQGIETHLEFAVAALERDA----QG-TTLVAQ-DGTR-LEGF-DSVIWAVGRAPNTR 267 (463)
T ss_dssp HHHTTCEEESSCCEEEEEEET----TE-EEEEET-TCCE-EEEE-SEEEECSCEEESCT
T ss_pred HHHCCCEEEeCCEEEEEEEeC----Ce-EEEEEe-CCcE-EEEc-CEEEECCCCCcCCC
Confidence 345689999999999986541 22 334432 5543 5667 79999999764443
No 191
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=34.12 E-value=85 Score=23.94 Aligned_cols=48 Identities=10% Similarity=0.077 Sum_probs=32.6
Q ss_pred CCeEEEccceEEEEEeccCCCCCeEEEEEEEe--CCeEEEEEeceEEEecCCcccCC
Q psy8943 27 KNLHIAMETQALRLLFDKSGPVPKAVGIEILR--DGRKHIIRAKKEIISSAGAINSP 81 (134)
Q Consensus 27 ~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~--~g~~~~~~a~~~vIlaaGai~tP 81 (134)
++.+|..++.|+.|.. . ++ + .|.+.+ +|....+.+ +.||.|.|+-...
T Consensus 122 g~~~v~~~~~v~~i~~-~---~~-v-~v~~~~~~~g~~~~~~a-d~vV~AdG~~S~v 171 (410)
T 3c96_A 122 GQQAVRTGLGVERIEE-R---DG-R-VLIGARDGHGKPQALGA-DVLVGADGIHSAV 171 (410)
T ss_dssp CTTSEEESEEEEEEEE-E---TT-E-EEEEEEETTSCEEEEEE-SEEEECCCTTCHH
T ss_pred CCcEEEECCEEEEEec-C---Cc-c-EEEEecCCCCCceEEec-CEEEECCCccchh
Confidence 3468999999999976 2 22 3 255554 465566788 7999998875443
No 192
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=33.78 E-value=44 Score=27.26 Aligned_cols=47 Identities=15% Similarity=0.204 Sum_probs=30.3
Q ss_pred hhhhhhhhcCCCeEEEc--cceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCc
Q psy8943 17 KAFLRPIRLRKNLHIAM--ETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGA 77 (134)
Q Consensus 17 ~~~l~~~~~~~nl~i~t--~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGa 77 (134)
..|+ ++.+++|++|.. ...+++|.-+ ||... +|.. +.+ +.||+|.|-
T Consensus 334 ~~y~-~~l~~~nV~lv~~~~~~I~~it~~---------gv~~~-dG~~--~~~-DvIV~ATGf 382 (540)
T 3gwf_A 334 SGYY-EVYNRPNVEAVAIKENPIREVTAK---------GVVTE-DGVL--HEL-DVLVFATGF 382 (540)
T ss_dssp SSTG-GGGGSTTEEEEETTTSCEEEECSS---------EEEET-TCCE--EEC-SEEEECCCB
T ss_pred ccHH-HHhcCCCEEEEeCCCCCccEEecC---------eEEcC-CCCE--EEC-CEEEECCcc
Confidence 3455 556789999995 6678887322 44432 5543 455 688888885
No 193
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=33.38 E-value=1.3e+02 Score=25.05 Aligned_cols=43 Identities=9% Similarity=0.249 Sum_probs=29.4
Q ss_pred CeEEEccceEEEEEeccCCCCCeEEEEEEEe---CCeEEEEEeceEEEecCC
Q psy8943 28 NLHIAMETQALRLLFDKSGPVPKAVGIEILR---DGRKHIIRAKKEIISSAG 76 (134)
Q Consensus 28 nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~---~g~~~~~~a~~~vIlaaG 76 (134)
.++|.+++.|++|..+. +. ..|.+.+ .+....+.+ +.||++..
T Consensus 410 ~l~I~l~~~V~~I~~~~----~~-v~V~~~~~~~~~~~~~~~A-d~VI~tvP 455 (662)
T 2z3y_A 410 GLDIKLNTAVRQVRYTA----SG-CEVIAVNTRSTSQTFIYKC-DAVLCTLP 455 (662)
T ss_dssp TCEEETTEEEEEEEEET----TE-EEEEEEESSCTTCEEEEEE-SEEEECCC
T ss_pred cCceecCCeEEEEEECC----Cc-EEEEEeecccCCCCeEEEe-CEEEECCC
Confidence 57999999999998872 22 2345544 233456788 68888875
No 194
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=32.77 E-value=24 Score=27.65 Aligned_cols=45 Identities=20% Similarity=0.171 Sum_probs=31.2
Q ss_pred eEEEccceEEEEEeccCCCCCeEEEEEEEe-CCeEEEEEeceEEEecCCcccCCchh
Q psy8943 29 LHIAMETQALRLLFDKSGPVPKAVGIEILR-DGRKHIIRAKKEIISSAGAINSPQLL 84 (134)
Q Consensus 29 l~i~t~~~V~ri~~~~~~~~~~a~gV~~~~-~g~~~~~~a~~~vIlaaGai~tP~lL 84 (134)
.+|.+++.|++|..+. +. +.+.. +| .+.+ +.||+|+++-...+||
T Consensus 249 ~~i~~~~~V~~i~~~~----~~---~~v~~~~g---~~~a-d~vV~a~p~~~~~~ll 294 (475)
T 3lov_A 249 SEIRLETPLLAISRED----GR---YRLKTDHG---PEYA-DYVLLTIPHPQVVQLL 294 (475)
T ss_dssp CEEESSCCCCEEEEET----TE---EEEECTTC---CEEE-SEEEECSCHHHHHHHC
T ss_pred CEEEcCCeeeEEEEeC----CE---EEEEECCC---eEEC-CEEEECCCHHHHHHHc
Confidence 6899999999998762 22 33433 45 4677 7999999875544444
No 195
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=32.62 E-value=1e+02 Score=24.39 Aligned_cols=54 Identities=22% Similarity=0.416 Sum_probs=34.9
Q ss_pred CCCeEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcccCCchhhhccc
Q psy8943 26 RKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQLLMVSGG 89 (134)
Q Consensus 26 ~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai~tP~lLl~SGi 89 (134)
..+++++.++.|+.|..+. .. |.+..++....+.+ +.+|+|.|+ .|.++...|.
T Consensus 104 ~~gv~v~~~~~v~~i~~~~----~~---v~v~~~g~~~~~~~-d~lviAtG~--~p~~p~i~G~ 157 (490)
T 2bc0_A 104 SLGAKVYMESPVQSIDYDA----KT---VTALVDGKNHVETY-DKLIFATGS--QPILPPIKGA 157 (490)
T ss_dssp HTTCEEETTCCEEEEETTT----TE---EEEEETTEEEEEEC-SEEEECCCE--EECCCSCBTC
T ss_pred hCCCEEEeCCEEEEEECCC----CE---EEEEeCCcEEEEEC-CEEEECCCC--CcCCCCCCCc
Confidence 4579999999999987652 22 33331344456777 799999996 4555444444
No 196
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=31.96 E-value=98 Score=24.06 Aligned_cols=57 Identities=11% Similarity=0.159 Sum_probs=37.5
Q ss_pred hhcCCCeEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcccCCchhhhcccc
Q psy8943 23 IRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQLLMVSGGS 90 (134)
Q Consensus 23 ~~~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai~tP~lLl~SGig 90 (134)
...+. +++.+++.|.++.-+ +++..+ ..++. .+.+ +.||+|.|..-+..+|...|+.
T Consensus 199 ~l~~~-v~i~~~~~v~~i~~~-----~~v~~v--~~~g~--~i~~-D~Vv~a~G~~p~~~l~~~~gl~ 255 (449)
T 3kd9_A 199 KLKKH-VNLRLQEITMKIEGE-----ERVEKV--VTDAG--EYKA-ELVILATGIKPNIELAKQLGVR 255 (449)
T ss_dssp HHTTT-SEEEESCCEEEEECS-----SSCCEE--EETTE--EEEC-SEEEECSCEEECCHHHHHTTCC
T ss_pred HHHhC-cEEEeCCeEEEEecc-----CcEEEE--EeCCC--EEEC-CEEEEeeCCccCHHHHHhCCcc
Confidence 33455 999999999998643 233233 23553 4666 7999999987666666555553
No 197
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=30.99 E-value=49 Score=25.46 Aligned_cols=47 Identities=17% Similarity=0.240 Sum_probs=30.5
Q ss_pred eEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcccCCchh
Q psy8943 29 LHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQLL 84 (134)
Q Consensus 29 l~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai~tP~lL 84 (134)
.+|.+++.|++|..+. +.+ .|.. .+|. .+.+ +.||+|+.+-...+||
T Consensus 248 ~~i~~~~~V~~i~~~~----~~~-~v~~-~~g~--~~~a-d~vi~a~p~~~~~~l~ 294 (470)
T 3i6d_A 248 TKVYKGTKVTKLSHSG----SCY-SLEL-DNGV--TLDA-DSVIVTAPHKAAAGML 294 (470)
T ss_dssp EEEECSCCEEEEEECS----SSE-EEEE-SSSC--EEEE-SEEEECSCHHHHHHHT
T ss_pred CEEEeCCceEEEEEcC----CeE-EEEE-CCCC--EEEC-CEEEECCCHHHHHHHc
Confidence 6899999999998762 222 2332 2454 3667 6899998865444443
No 198
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=30.57 E-value=36 Score=27.49 Aligned_cols=51 Identities=14% Similarity=0.199 Sum_probs=32.5
Q ss_pred hcCCCeEEEccceEEEEEeccCCCCCeEEEEEEEeCCe--EEEEEeceEEEecCCcccCC
Q psy8943 24 RLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGR--KHIIRAKKEIISSAGAINSP 81 (134)
Q Consensus 24 ~~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~--~~~~~a~~~vIlaaGai~tP 81 (134)
+.+.+++|++++.|++|.-+ +....+.. .+|. ..++.+ +.||.|+|.--+|
T Consensus 282 L~~~GV~v~~~~~v~~v~~~-----~~~~~~~~-~dg~~~~~~i~a-d~viwa~Gv~~~~ 334 (502)
T 4g6h_A 282 LENTSIKVHLRTAVAKVEEK-----QLLAKTKH-EDGKITEETIPY-GTLIWATGNKARP 334 (502)
T ss_dssp HHHTTCEEETTEEEEEECSS-----EEEEEEEC-TTSCEEEEEEEC-SEEEECCCEECCH
T ss_pred HHhcceeeecCceEEEEeCC-----ceEEEEEe-cCcccceeeecc-CEEEEccCCcCCH
Confidence 34568999999999998422 12222221 1343 346777 7999999976554
No 199
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=30.31 E-value=54 Score=25.70 Aligned_cols=41 Identities=10% Similarity=0.192 Sum_probs=28.0
Q ss_pred CeEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCc
Q psy8943 28 NLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGA 77 (134)
Q Consensus 28 nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGa 77 (134)
+.+|.+++.|++|..+. +.++ |.+. +|. .+.+ +.||+|++.
T Consensus 228 ~~~i~~~~~V~~i~~~~----~~v~-v~~~-~g~--~~~a-d~vI~a~~~ 268 (472)
T 1b37_A 228 DPRLQLNKVVREIKYSP----GGVT-VKTE-DNS--VYSA-DYVMVSASL 268 (472)
T ss_dssp CTTEESSCCEEEEEECS----SCEE-EEET-TSC--EEEE-SEEEECSCH
T ss_pred ccEEEcCCEEEEEEEcC----CcEE-EEEC-CCC--EEEc-CEEEEecCH
Confidence 45799999999998762 2333 4332 453 3567 789999875
No 200
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=29.83 E-value=19 Score=28.48 Aligned_cols=55 Identities=11% Similarity=0.059 Sum_probs=34.1
Q ss_pred eEEEccceEEEEEeccCCC-CCeEEEEEEEe-CCeE-EEEEeceEEEecCCcccCCchh
Q psy8943 29 LHIAMETQALRLLFDKSGP-VPKAVGIEILR-DGRK-HIIRAKKEIISSAGAINSPQLL 84 (134)
Q Consensus 29 l~i~t~~~V~ri~~~~~~~-~~~a~gV~~~~-~g~~-~~~~a~~~vIlaaGai~tP~lL 84 (134)
.+|.+++.|++|..+.++. .+....|.+.+ +|.. ..+.+ +.||+++..-...+||
T Consensus 256 ~~i~~~~~V~~I~~~~~~~~~~~~~~v~~~~~~g~~~~~~~a-d~VI~a~p~~~l~~ll 313 (504)
T 1sez_A 256 DELRLNSRVLELSCSCTEDSAIDSWSIISASPHKRQSEEESF-DAVIMTAPLCDVKSMK 313 (504)
T ss_dssp TTEETTCCEEEEEEECSSSSSSCEEEEEEBCSSSSCBCCCEE-SEEEECSCHHHHHTSE
T ss_pred ceEEcCCeEEEEEecCCCCcccceEEEEEcCCCCccceeEEC-CEEEECCCHHHHHHHh
Confidence 5799999999998763210 01135666654 3422 34567 7899998865444444
No 201
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=29.29 E-value=54 Score=26.04 Aligned_cols=47 Identities=15% Similarity=0.224 Sum_probs=30.6
Q ss_pred CeEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcccCCch
Q psy8943 28 NLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQL 83 (134)
Q Consensus 28 nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai~tP~l 83 (134)
+.+|.+++.|++|..+. +.++ |... +|. .+.+ +.||++.+.-...+|
T Consensus 226 g~~i~~~~~V~~i~~~~----~~v~-v~~~-~g~--~~~a-d~VI~a~p~~~l~~l 272 (520)
T 1s3e_A 226 GDRVKLERPVIYIDQTR----ENVL-VETL-NHE--MYEA-KYVISAIPPTLGMKI 272 (520)
T ss_dssp GGGEESSCCEEEEECSS----SSEE-EEET-TSC--EEEE-SEEEECSCGGGGGGS
T ss_pred CCcEEcCCeeEEEEECC----CeEE-EEEC-CCe--EEEe-CEEEECCCHHHHcce
Confidence 46799999999998652 3343 3332 454 3567 799999886444333
No 202
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=28.90 E-value=95 Score=24.50 Aligned_cols=55 Identities=7% Similarity=0.070 Sum_probs=35.7
Q ss_pred cCCCeEEEccceEEEEEeccCCCCCeEEEEEEEe--CCeEEEEEeceEEEecCCcccCCchhhhccc
Q psy8943 25 LRKNLHIAMETQALRLLFDKSGPVPKAVGIEILR--DGRKHIIRAKKEIISSAGAINSPQLLMVSGG 89 (134)
Q Consensus 25 ~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~--~g~~~~~~a~~~vIlaaGai~tP~lLl~SGi 89 (134)
...+++++.++.|+.|..+. . .|.+.. +|....+.+ +.+|+|.|+ .|.++...|.
T Consensus 104 ~~~gv~~~~~~~v~~i~~~~----~---~v~v~~~~~g~~~~~~~-d~lviAtG~--~p~~p~i~G~ 160 (480)
T 3cgb_A 104 DKYGIDAKVRHEVTKVDTEK----K---IVYAEHTKTKDVFEFSY-DRLLIATGV--RPVMPEWEGR 160 (480)
T ss_dssp HTTCCEEESSEEEEEEETTT----T---EEEEEETTTCCEEEEEC-SEEEECCCE--EECCCCCBTT
T ss_pred hhcCCEEEeCCEEEEEECCC----C---EEEEEEcCCCceEEEEc-CEEEECCCC--cccCCCCCCc
Confidence 34589999999999987652 2 244443 455456777 799999996 3544433333
No 203
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=28.72 E-value=1.7e+02 Score=22.87 Aligned_cols=49 Identities=12% Similarity=0.078 Sum_probs=29.7
Q ss_pred hhcCCCeEEEccceEEEEEeccCCCCCeEEEEEEEe-CCeEEEEEeceEEEecCCcccCCchh
Q psy8943 23 IRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILR-DGRKHIIRAKKEIISSAGAINSPQLL 84 (134)
Q Consensus 23 ~~~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~-~g~~~~~~a~~~vIlaaGai~tP~lL 84 (134)
.....+++++.+ .|..+.-+ .+.+.. ++....+.+ +.+|+|.|+ .|..+
T Consensus 98 ~~~~~~v~~~~g-~v~~id~~---------~~~V~~~~g~~~~~~~-d~lviAtG~--~p~~p 147 (466)
T 3l8k_A 98 MSQYETLTFYKG-YVKIKDPT---------HVIVKTDEGKEIEAET-RYMIIASGA--ETAKL 147 (466)
T ss_dssp HTTCTTEEEESE-EEEEEETT---------EEEEEETTSCEEEEEE-EEEEECCCE--EECCC
T ss_pred HHHhCCCEEEEe-EEEEecCC---------eEEEEcCCCcEEEEec-CEEEECCCC--CccCC
Confidence 345678998888 56665421 233333 455544677 789999997 34443
No 204
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=28.32 E-value=1.1e+02 Score=23.74 Aligned_cols=61 Identities=10% Similarity=0.067 Sum_probs=36.1
Q ss_pred hhhhhhcCCCeEEEccceEEEEEeccCCCCCeEEEEEEEe---CCe---EEEEEeceEEEecCCcccCCchhhhccc
Q psy8943 19 FLRPIRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILR---DGR---KHIIRAKKEIISSAGAINSPQLLMVSGG 89 (134)
Q Consensus 19 ~l~~~~~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~---~g~---~~~~~a~~~vIlaaGai~tP~lLl~SGi 89 (134)
.+...+.+.++++++++.|++|.-+ ++.+.. ++. ...+.+ +.++++.|....+.+...+|+
T Consensus 213 ~~~~~l~~~gI~~~~~~~v~~v~~~---------~v~~~~~~~~g~~~~~~~i~~-D~vv~~~g~~~~~~~~~~~gl 279 (437)
T 3sx6_A 213 ILTKGLKEEGIEAYTNCKVTKVEDN---------KMYVTQVDEKGETIKEMVLPV-KFGMMIPAFKGVPAVAGVEGL 279 (437)
T ss_dssp HHHHHHHHTTCEEECSEEEEEEETT---------EEEEEEECTTSCEEEEEEEEC-SEEEEECCEECCHHHHTSTTT
T ss_pred HHHHHHHHCCCEEEcCCEEEEEECC---------eEEEEecccCCccccceEEEE-eEEEEcCCCcCchhhhccccc
Confidence 3334445678999999999998522 222322 333 345666 688888886544333333455
No 205
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=27.68 E-value=1e+02 Score=23.93 Aligned_cols=49 Identities=16% Similarity=0.299 Sum_probs=33.0
Q ss_pred CCCeEEEccceEEEEEeccCCCCCeEEEEEEEe--CCeEEEEEeceEEEecCCcccCCchh
Q psy8943 26 RKNLHIAMETQALRLLFDKSGPVPKAVGIEILR--DGRKHIIRAKKEIISSAGAINSPQLL 84 (134)
Q Consensus 26 ~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~--~g~~~~~~a~~~vIlaaGai~tP~lL 84 (134)
..+++++.++.|+.|..+. . .|.+.+ +|....+.+ +.+|+|.|+- |..+
T Consensus 68 ~~gv~~~~~~~v~~i~~~~----~---~v~~~~~~~g~~~~~~~-d~lviAtG~~--p~~p 118 (447)
T 1nhp_A 68 SRGVNVFSNTEITAIQPKE----H---QVTVKDLVSGEERVENY-DKLIISPGAV--PFEL 118 (447)
T ss_dssp HTTCEEEETEEEEEEETTT----T---EEEEEETTTCCEEEEEC-SEEEECCCEE--ECCC
T ss_pred HCCCEEEECCEEEEEeCCC----C---EEEEEecCCCceEEEeC-CEEEEcCCCC--cCCC
Confidence 3479999999999987652 2 344443 355455777 7999999963 4444
No 206
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=27.66 E-value=72 Score=25.01 Aligned_cols=43 Identities=9% Similarity=0.149 Sum_probs=28.3
Q ss_pred EEEccceEEEEEeccCCCCCeEEEEEEEeCCe-EEEEEeceEEEecCCcc
Q psy8943 30 HIAMETQALRLLFDKSGPVPKAVGIEILRDGR-KHIIRAKKEIISSAGAI 78 (134)
Q Consensus 30 ~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~-~~~~~a~~~vIlaaGai 78 (134)
+|.+++.|++|..+. +.+ .|.+.+... ...+.+ +.||++++.-
T Consensus 254 ~i~~~~~V~~I~~~~----~~v-~v~~~~~~~~~~~~~a-d~vI~t~p~~ 297 (498)
T 2iid_A 254 KVHFNAQVIKIQQND----QKV-TVVYETLSKETPSVTA-DYVIVCTTSR 297 (498)
T ss_dssp GEESSCEEEEEEECS----SCE-EEEEECSSSCCCEEEE-SEEEECSCHH
T ss_pred ccccCCEEEEEEECC----CeE-EEEEecCCcccceEEe-CEEEECCChH
Confidence 689999999998762 233 455443221 224677 7899999864
No 207
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=27.17 E-value=2.1e+02 Score=23.22 Aligned_cols=59 Identities=10% Similarity=-0.041 Sum_probs=35.3
Q ss_pred hcCCCeEEEccceEEEEEec-----cCCCCCeEEEEEEE-eCCeEEEEEeceEEEecCCcccCCchh
Q psy8943 24 RLRKNLHIAMETQALRLLFD-----KSGPVPKAVGIEIL-RDGRKHIIRAKKEIISSAGAINSPQLL 84 (134)
Q Consensus 24 ~~~~nl~i~t~~~V~ri~~~-----~~~~~~~a~gV~~~-~~g~~~~~~a~~~vIlaaGai~tP~lL 84 (134)
+...++++++++.+++|.-. ..+..+++ .|.+. .+|....+.+ +.||+|.|..-...+|
T Consensus 336 l~~~gv~i~~~~~v~~v~~~~~~~~~~~~~~~~-~v~~~~~~g~~~~~~~-D~vi~a~G~~p~~~~l 400 (598)
T 2x8g_A 336 MENHGVKFAKLCVPDEIKQLKVVDTENNKPGLL-LVKGHYTDGKKFEEEF-ETVIFAVGREPQLSKV 400 (598)
T ss_dssp HHHTTCEEEETEEEEEEEEEECCBTTTTBCCEE-EEEEEETTSCEEEEEE-SEEEECSCEEECGGGT
T ss_pred HHhCCCEEEECCeEEEEEeccccccccCCCceE-EEEEEeCCCcEEeccC-CEEEEEeCCccccCcc
Confidence 34568999999988887421 11011222 23333 3566555567 7999999976555543
No 208
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=26.74 E-value=1e+02 Score=25.08 Aligned_cols=47 Identities=15% Similarity=0.132 Sum_probs=30.1
Q ss_pred hhhhhhhhcCCCeEEE--ccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcc
Q psy8943 17 KAFLRPIRLRKNLHIA--METQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAI 78 (134)
Q Consensus 17 ~~~l~~~~~~~nl~i~--t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai 78 (134)
..|+ ++.+++|++|. ....|++|.-+ ||... +| .+.+ +.||+|+|--
T Consensus 347 ~~y~-~al~~~~V~lvd~~~~~I~~it~~---------gv~~~-dG---~~~~-D~iI~ATGf~ 395 (549)
T 4ap3_A 347 SGYY-ETYNRDNVELVDLRSTPIVGMDET---------GIVTT-GA---HYDL-DMIVLATGFD 395 (549)
T ss_dssp SSTG-GGGGSTTEEEEETTTSCEEEEETT---------EEEES-SC---EEEC-SEEEECCCEE
T ss_pred ccHH-HHhcCCCEEEEeCCCCCceEEeCC---------cEEeC-CC---ceec-CEEEECCccc
Confidence 3455 55678999998 24678887432 44432 45 3566 7899999853
No 209
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=25.07 E-value=1.6e+02 Score=25.68 Aligned_cols=43 Identities=9% Similarity=0.253 Sum_probs=29.3
Q ss_pred CeEEEccceEEEEEeccCCCCCeEEEEEEEe---CCeEEEEEeceEEEecCC
Q psy8943 28 NLHIAMETQALRLLFDKSGPVPKAVGIEILR---DGRKHIIRAKKEIISSAG 76 (134)
Q Consensus 28 nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~---~g~~~~~~a~~~vIlaaG 76 (134)
.+.|.+++.|++|..+. +.+ .|.+.+ .+....+.+ +.||++..
T Consensus 581 ~l~I~Lnt~V~~I~~~~----~gV-~V~~~~~~~~~~g~~i~A-D~VIvTvP 626 (852)
T 2xag_A 581 GLDIKLNTAVRQVRYTA----SGC-EVIAVNTRSTSQTFIYKC-DAVLCTLP 626 (852)
T ss_dssp TCCEECSEEEEEEEEET----TEE-EEEEEESSSTTCEEEEEE-SEEEECCC
T ss_pred CCCEEeCCeEEEEEEcC----CcE-EEEEeecccCCCCeEEEC-CEEEECCC
Confidence 57899999999998872 222 355554 233456788 68888864
No 210
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=24.95 E-value=1e+02 Score=24.51 Aligned_cols=48 Identities=27% Similarity=0.372 Sum_probs=32.4
Q ss_pred CCCeEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCccc
Q psy8943 26 RKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAIN 79 (134)
Q Consensus 26 ~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai~ 79 (134)
..+++++.++.|..|..+. ..+. +...+++....+.. +.+|+|.|+..
T Consensus 172 ~~~v~~~~~~~v~~i~~~~----~~~~-~~~~~~~~~~~~~~-d~lvlAtGa~~ 219 (493)
T 1y56_A 172 NENTKIYLETSALGVFDKG----EYFL-VPVVRGDKLIEILA-KRVVLATGAID 219 (493)
T ss_dssp CTTEEEETTEEECCCEECS----SSEE-EEEEETTEEEEEEE-SCEEECCCEEE
T ss_pred hcCCEEEcCCEEEEEEcCC----cEEE-EEEecCCeEEEEEC-CEEEECCCCCc
Confidence 5689999999998886652 2222 12224565566777 78999999753
No 211
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=24.67 E-value=86 Score=23.80 Aligned_cols=43 Identities=16% Similarity=0.137 Sum_probs=29.2
Q ss_pred CCeEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcc
Q psy8943 27 KNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAI 78 (134)
Q Consensus 27 ~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai 78 (134)
++++|..++.|+.|..+. +.++ |.+. +|. .+.+ +.||.|.|.-
T Consensus 110 ~~~~i~~~~~v~~i~~~~----~~v~-v~~~-~g~--~~~a-d~vV~AdG~~ 152 (397)
T 2vou_A 110 GPERYHTSKCLVGLSQDS----ETVQ-MRFS-DGT--KAEA-NWVIGADGGA 152 (397)
T ss_dssp CSTTEETTCCEEEEEECS----SCEE-EEET-TSC--EEEE-SEEEECCCTT
T ss_pred CCcEEEcCCEEEEEEecC----CEEE-EEEC-CCC--EEEC-CEEEECCCcc
Confidence 478899999999997662 2222 3332 453 4667 7899998864
No 212
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=24.19 E-value=1.3e+02 Score=22.77 Aligned_cols=44 Identities=16% Similarity=0.234 Sum_probs=29.6
Q ss_pred eEEEccceEEEEEeccCCCCCeEEEEEEEe-CCeEEEEEeceEEEecCCcccCCc
Q psy8943 29 LHIAMETQALRLLFDKSGPVPKAVGIEILR-DGRKHIIRAKKEIISSAGAINSPQ 82 (134)
Q Consensus 29 l~i~t~~~V~ri~~~~~~~~~~a~gV~~~~-~g~~~~~~a~~~vIlaaGai~tP~ 82 (134)
.+|..++.|+.|..+. + +|.+.. +|. .+.+ +.||.|.|.-..-+
T Consensus 140 ~~i~~~~~v~~i~~~~----~---~v~v~~~~g~--~~~a-~~vV~AdG~~S~vr 184 (407)
T 3rp8_A 140 DSVQFGKRVTRCEEDA----D---GVTVWFTDGS--SASG-DLLIAADGSHSALR 184 (407)
T ss_dssp GGEEESCCEEEEEEET----T---EEEEEETTSC--EEEE-SEEEECCCTTCSSH
T ss_pred CEEEECCEEEEEEecC----C---cEEEEEcCCC--EEee-CEEEECCCcChHHH
Confidence 7899999999998762 2 233333 454 5667 78888888654433
No 213
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=24.02 E-value=76 Score=25.59 Aligned_cols=47 Identities=11% Similarity=0.188 Sum_probs=30.5
Q ss_pred hhhhhhhcCCCeEEE--ccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCccc
Q psy8943 18 AFLRPIRLRKNLHIA--METQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAIN 79 (134)
Q Consensus 18 ~~l~~~~~~~nl~i~--t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai~ 79 (134)
.|+ ++.+++|++|. ....|++|.- .||...+ ..+.+ +.||+|+|.--
T Consensus 343 ~y~-~~~~~~~v~lv~~~~~~i~~i~~---------~gv~~~d----~~~~~-D~ii~atG~~~ 391 (542)
T 1w4x_A 343 DYY-EMFNRDNVHLVDTLSAPIETITP---------RGVRTSE----REYEL-DSLVLATGFDA 391 (542)
T ss_dssp SHH-HHTTSTTEEEEETTTSCEEEECS---------SEEEESS----CEEEC-SEEEECCCCCC
T ss_pred cHH-HHhCCCCEEEEecCCCCceEEcC---------CeEEeCC----eEEec-CEEEEcCCccc
Confidence 455 45678899987 3566877731 1454432 35666 79999999654
No 214
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=23.57 E-value=62 Score=25.41 Aligned_cols=57 Identities=5% Similarity=-0.034 Sum_probs=36.3
Q ss_pred hcCCCeEEEccceEEEEEeccCCCCCeEEEEEEEe-CCeEEEEEeceEEEecCCcccCCchh--hhcccc
Q psy8943 24 RLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILR-DGRKHIIRAKKEIISSAGAINSPQLL--MVSGGS 90 (134)
Q Consensus 24 ~~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~-~g~~~~~~a~~~vIlaaGai~tP~lL--l~SGig 90 (134)
+...++++++++.|++|.- +. +.+.. +|....+.+ +.||+|.|..-...+| ...|+.
T Consensus 222 l~~~gv~i~~~~~v~~i~~------~~---v~v~~~~G~~~~i~~-D~vv~a~G~~p~~~~l~~~~~g~~ 281 (458)
T 1lvl_A 222 LKKLGIALHLGHSVEGYEN------GC---LLANDGKGGQLRLEA-DRVLVAVGRRPRTKGFNLECLDLK 281 (458)
T ss_dssp HHHHTCEEETTCEEEEEET------TE---EEEECSSSCCCEECC-SCEEECCCEEECCSSSSGGGSCCC
T ss_pred HHHCCCEEEECCEEEEEEe------CC---EEEEECCCceEEEEC-CEEEECcCCCcCCCCCCcHhcCCc
Confidence 3456899999999999853 12 33332 453345667 7899999976555543 334553
No 215
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=23.52 E-value=90 Score=23.47 Aligned_cols=43 Identities=14% Similarity=0.206 Sum_probs=29.5
Q ss_pred cCCCeEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCccc
Q psy8943 25 LRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAIN 79 (134)
Q Consensus 25 ~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai~ 79 (134)
...+++|+.++.|+.|..+ + .|.+. +|. .+.+ +.||.|.|.-.
T Consensus 118 ~~~gv~i~~~~~v~~i~~~-----~---~v~~~-~g~--~~~a-d~vV~AdG~~s 160 (379)
T 3alj_A 118 RALGVDISVNSEAVAADPV-----G---RLTLQ-TGE--VLEA-DLIVGADGVGS 160 (379)
T ss_dssp HHTTCEEESSCCEEEEETT-----T---EEEET-TSC--EEEC-SEEEECCCTTC
T ss_pred HhcCCEEEeCCEEEEEEeC-----C---EEEEC-CCC--EEEc-CEEEECCCccH
Confidence 3458999999999998651 2 34433 443 4667 78899988643
No 216
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=22.54 E-value=2e+02 Score=25.28 Aligned_cols=47 Identities=17% Similarity=0.092 Sum_probs=31.2
Q ss_pred CCCeEEEccceEEEEEeccCCCCCeEEEEEEEeC------------CeEEEEEeceEEEecCCcc
Q psy8943 26 RKNLHIAMETQALRLLFDKSGPVPKAVGIEILRD------------GRKHIIRAKKEIISSAGAI 78 (134)
Q Consensus 26 ~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~------------g~~~~~~a~~~vIlaaGai 78 (134)
.+++++++++.|..|..+ +.+..++...+ +....+.+ +.+|||.|+.
T Consensus 194 ~~~v~~~~~~~V~~i~~~-----~~~~~v~~~~~~~~v~~~~~~~~~~~~~i~~-d~lVlATGs~ 252 (965)
T 2gag_A 194 AEETTHLQRTTVFGSYDA-----NYLIAAQRRTVHLDGPSGPGVSRERIWHIRA-KQVVLATGAH 252 (965)
T ss_dssp STTEEEESSEEEEEEETT-----TEEEEEEECSTTCSSCCCTTCCSEEEEEEEE-EEEEECCCEE
T ss_pred cCCcEEEeCCEEEeeecC-----CceeeeEeecccccccccccCCCCceEEEEC-CEEEECCCCc
Confidence 358999999999988643 34444432111 22245677 7999999986
No 217
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=20.83 E-value=1.7e+02 Score=22.77 Aligned_cols=56 Identities=11% Similarity=0.122 Sum_probs=37.0
Q ss_pred hhcCCCeEEEccceEEEEEeccCCCCCeEEEEEEEeCCeEEEEEeceEEEecCCcccCCchhhhccccc
Q psy8943 23 IRLRKNLHIAMETQALRLLFDKSGPVPKAVGIEILRDGRKHIIRAKKEIISSAGAINSPQLLMVSGGSS 91 (134)
Q Consensus 23 ~~~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~~g~~~~~~a~~~vIlaaGai~tP~lLl~SGig~ 91 (134)
.....++++++++.|+++.-+ . |.+. +++ .+.+ +.|++|.|..-...+|..+|+.-
T Consensus 197 ~l~~~gV~i~~~~~v~~~~~~------~---v~~~-~g~--~~~~-D~vl~a~G~~Pn~~~~~~~gl~~ 252 (437)
T 4eqs_A 197 ELDKREIPYRLNEEINAINGN------E---ITFK-SGK--VEHY-DMIIEGVGTHPNSKFIESSNIKL 252 (437)
T ss_dssp HHHHTTCCEEESCCEEEEETT------E---EEET-TSC--EEEC-SEEEECCCEEESCGGGTTSSCCC
T ss_pred HhhccceEEEeccEEEEecCC------e---eeec-CCe--EEee-eeEEEEeceecCcHHHHhhhhhh
Confidence 334568999999999887422 1 3322 443 3456 78999999776556776677653
No 218
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=20.17 E-value=1.6e+02 Score=22.77 Aligned_cols=54 Identities=13% Similarity=0.204 Sum_probs=34.5
Q ss_pred cCCCeEEEccceEEEEEeccCCCCCeEEEEEEEe--CCeEEEEEeceEEEecCCcccCCchhhhcc
Q psy8943 25 LRKNLHIAMETQALRLLFDKSGPVPKAVGIEILR--DGRKHIIRAKKEIISSAGAINSPQLLMVSG 88 (134)
Q Consensus 25 ~~~nl~i~t~~~V~ri~~~~~~~~~~a~gV~~~~--~g~~~~~~a~~~vIlaaGai~tP~lLl~SG 88 (134)
...+++++.++.|+.|..+. . .|.+.+ ++....+.+ +.+|+|.|+. |..+...|
T Consensus 69 ~~~gv~~~~~~~v~~i~~~~----~---~v~v~~~~~g~~~~~~~-d~lviAtGs~--p~~p~i~g 124 (452)
T 2cdu_A 69 SNLGANVQMRHQVTNVDPET----K---TIKVKDLITNEEKTEAY-DKLIMTTGSK--PTVPPIPG 124 (452)
T ss_dssp HHTTCEEEESEEEEEEEGGG----T---EEEEEETTTCCEEEEEC-SEEEECCCEE--ECCCCCTT
T ss_pred HHcCCEEEeCCEEEEEEcCC----C---EEEEEecCCCceEEEEC-CEEEEccCCC--cCCCCCCC
Confidence 34579999999999987652 2 244443 333456777 7999999963 44443333
Done!