BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy895
(269 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q3MHH6|PYRD2_BOVIN Pyridine nucleotide-disulfide oxidoreductase domain-containing
protein 2 OS=Bos taurus GN=PYROXD2 PE=2 SV=1
Length = 581
Score = 177 bits (449), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 90/153 (58%), Positives = 109/153 (71%), Gaps = 2/153 (1%)
Query: 116 SDRPMIEMVLPSSLDNTLSPPGHHVCLLFTQFTPYKLAGDRDWTEEDKANYATNVFSSIE 175
S RP+IE+ +PSSLD TL+PPG HV LFTQ+TPY LAG + W E+ + YA VF IE
Sbjct: 429 SKRPLIELCIPSSLDPTLAPPGCHVVSLFTQYTPYTLAGGKAWDEQQRNTYADRVFDCIE 488
Query: 176 QYCPGFTQDIVGYEILTPPDLEKEFGLTGGNIFHGALSLNQLLFNRPLPIQGPSSPFTLI 235
Y PGF +VG +ILTPPDLE+ FGL GGNIFH A+SL+QL F RP+P+ SS + +
Sbjct: 489 AYAPGFKGSVVGRDILTPPDLERVFGLPGGNIFHCAMSLDQLYFARPVPLH--SSYCSPL 546
Query: 236 PHLLLCGSGAHPGGGVCGAPGYIAAQMVNRLMR 268
L LCGSGAHPGGGV GA G AA +V R +R
Sbjct: 547 RGLYLCGSGAHPGGGVMGAAGRNAAHVVFRDLR 579
>sp|Q3U4I7|PYRD2_MOUSE Pyridine nucleotide-disulfide oxidoreductase domain-containing
protein 2 OS=Mus musculus GN=Pyroxd2 PE=2 SV=2
Length = 580
Score = 172 bits (436), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 87/153 (56%), Positives = 107/153 (69%), Gaps = 2/153 (1%)
Query: 116 SDRPMIEMVLPSSLDNTLSPPGHHVCLLFTQFTPYKLAGDRDWTEEDKANYATNVFSSIE 175
S +PMIE+ +PSSLD TL+PPG HV LFTQ+TPY LAG + W E++K YA VF IE
Sbjct: 428 SQKPMIELCIPSSLDPTLAPPGCHVVSLFTQYTPYTLAGGKVWNEQEKNTYADKVFDCIE 487
Query: 176 QYCPGFTQDIVGYEILTPPDLEKEFGLTGGNIFHGALSLNQLLFNRPLPIQGPSSPFTLI 235
Y PGF + ++ +ILTPPDLE+ F L GGNIFHGA+SL+QL F RP+P S +
Sbjct: 488 AYAPGFKRSVLARDILTPPDLERIFRLPGGNIFHGAMSLDQLYFARPVPQH--SDYRCPV 545
Query: 236 PHLLLCGSGAHPGGGVCGAPGYIAAQMVNRLMR 268
L LCGSGAHPGGGV GA G AA +V R ++
Sbjct: 546 QGLYLCGSGAHPGGGVMGAAGRNAAHVVFRDLK 578
>sp|Q68FT3|PYRD2_RAT Pyridine nucleotide-disulfide oxidoreductase domain-containing
protein 2 OS=Rattus norvegicus GN=Pyroxd2 PE=2 SV=1
Length = 581
Score = 172 bits (435), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 88/153 (57%), Positives = 106/153 (69%), Gaps = 2/153 (1%)
Query: 116 SDRPMIEMVLPSSLDNTLSPPGHHVCLLFTQFTPYKLAGDRDWTEEDKANYATNVFSSIE 175
S RPMIE+ +PSSLD TL+P G HV LFTQ+TPY LAG + W E+ K YA VF IE
Sbjct: 429 SQRPMIELCIPSSLDPTLAPTGCHVVSLFTQYTPYTLAGGKVWDEQKKNTYADKVFDCIE 488
Query: 176 QYCPGFTQDIVGYEILTPPDLEKEFGLTGGNIFHGALSLNQLLFNRPLPIQGPSSPFTLI 235
Y PGF + ++G +ILTP DLE+ FGL GGNIFHGA+SL+QL F RP+P S +
Sbjct: 489 AYAPGFKRSVLGRDILTPQDLERIFGLPGGNIFHGAMSLDQLYFARPVPQH--SDYRCPV 546
Query: 236 PHLLLCGSGAHPGGGVCGAPGYIAAQMVNRLMR 268
L LCGSGAHPGGGV GA G AA +V R ++
Sbjct: 547 QGLYLCGSGAHPGGGVMGAAGRNAAHIVFRDLK 579
>sp|Q8N2H3|PYRD2_HUMAN Pyridine nucleotide-disulfide oxidoreductase domain-containing
protein 2 OS=Homo sapiens GN=PYROXD2 PE=2 SV=2
Length = 581
Score = 169 bits (428), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 87/154 (56%), Positives = 106/154 (68%), Gaps = 4/154 (2%)
Query: 116 SDRPMIEMVLPSSLDNTLSPPGHHVCLLFTQFTPYKLAGDRDWTEEDKANYATNVFSSIE 175
S RP+IE+ +PSSLD TL+PPG HV LFTQ+ PY LAG + W E+++ YA VF IE
Sbjct: 429 SHRPVIELCIPSSLDPTLAPPGCHVVSLFTQYMPYTLAGGKAWDEQERDAYADRVFDCIE 488
Query: 176 QYCPGFTQDIVGYEILTPPDLEKEFGLTGGNIFHGALSLNQLLFNRPLPIQ-GPSSPFTL 234
Y PGF +VG +ILTPPDLE+ FGL GGNIFH A+SL+QL F RP+P+ G P
Sbjct: 489 VYAPGFKDSVVGRDILTPPDLERIFGLPGGNIFHCAMSLDQLYFARPVPLHSGYRCPLQ- 547
Query: 235 IPHLLLCGSGAHPGGGVCGAPGYIAAQMVNRLMR 268
L LCGSGAHPGGGV GA G AA + R ++
Sbjct: 548 --GLYLCGSGAHPGGGVMGAAGRNAAHVAFRDLK 579
>sp|Q5RAP5|PYRD2_PONAB Pyridine nucleotide-disulfide oxidoreductase domain-containing
protein 2 OS=Pongo abelii GN=PYROXD2 PE=2 SV=1
Length = 581
Score = 165 bits (418), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 85/154 (55%), Positives = 105/154 (68%), Gaps = 4/154 (2%)
Query: 116 SDRPMIEMVLPSSLDNTLSPPGHHVCLLFTQFTPYKLAGDRDWTEEDKANYATNVFSSIE 175
S RP+IE+ +PSSLD L+P G HV LFTQ+TPY LAG + W E+++ YA VF +E
Sbjct: 429 SHRPIIELCIPSSLDPPLAPSGCHVVSLFTQYTPYTLAGGKAWDEQERDAYADRVFDCVE 488
Query: 176 QYCPGFTQDIVGYEILTPPDLEKEFGLTGGNIFHGALSLNQLLFNRPLPIQ-GPSSPFTL 234
Y PGF +VG +ILTPPDLE+ FGL GGNIFH A+SL+QL F RP+P+ G P
Sbjct: 489 VYAPGFKDSVVGRDILTPPDLERIFGLPGGNIFHCAMSLDQLYFARPVPLHSGYRCPLQ- 547
Query: 235 IPHLLLCGSGAHPGGGVCGAPGYIAAQMVNRLMR 268
L LCGSGAHPGGGV GA G AA + R ++
Sbjct: 548 --GLYLCGSGAHPGGGVMGAAGRNAAHVAFRDLK 579
>sp|B4GAN3|QVR_DROPE Protein quiver OS=Drosophila persimilis GN=qvr PE=3 SV=2
Length = 160
Score = 147 bits (370), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/118 (61%), Positives = 83/118 (70%), Gaps = 8/118 (6%)
Query: 28 RTRSIYCYECDSWKDRRCLDPFNYSVLPIHQPALNPCNGCCVKMVRNSKTEFESVRRTCT 87
+TRSIYCYECDSW D RC DPFNY+ LP QP L CNGCCVKMVR+ ++ +E VRR CT
Sbjct: 36 QTRSIYCYECDSWTDARCKDPFNYTALPRDQPPLMTCNGCCVKMVRHQRSRYEVVRRMCT 95
Query: 88 SKLDISLFMVDHVCMYEGSGRGHMCFCESDRPMIEMVLPSSLDNTLSPPGHHVCLLFT 145
S+L I+LFMVDHVCM E SG GHMCFCE D + SS D L GH + L+ T
Sbjct: 96 SQLQINLFMVDHVCMMESSGNGHMCFCEED------MCNSSKD--LYSHGHQLHLIIT 145
>sp|B4MQJ1|QVR_DROWI Protein quiver OS=Drosophila willistoni GN=qvr PE=3 SV=2
Length = 161
Score = 146 bits (368), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 64/90 (71%), Positives = 72/90 (80%)
Query: 28 RTRSIYCYECDSWKDRRCLDPFNYSVLPIHQPALNPCNGCCVKMVRNSKTEFESVRRTCT 87
+TRSIYCYECDSW D RC DPFNY+ LP QP L CNGCCVKMVR+ ++ +E VRR CT
Sbjct: 36 QTRSIYCYECDSWTDARCKDPFNYTALPRDQPPLMTCNGCCVKMVRHQRSRYEVVRRMCT 95
Query: 88 SKLDISLFMVDHVCMYEGSGRGHMCFCESD 117
S+L I+LFMVDHVCM E SG GHMCFCE D
Sbjct: 96 SQLQINLFMVDHVCMMESSGNGHMCFCEED 125
>sp|B4J8Z9|QVR_DROGR Protein quiver OS=Drosophila grimshawi GN=qvr PE=3 SV=2
Length = 161
Score = 146 bits (368), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 64/90 (71%), Positives = 72/90 (80%)
Query: 28 RTRSIYCYECDSWKDRRCLDPFNYSVLPIHQPALNPCNGCCVKMVRNSKTEFESVRRTCT 87
+TRSIYCYECDSW D RC DPFNY+ LP QP L CNGCCVKMVR+ ++ +E VRR CT
Sbjct: 35 QTRSIYCYECDSWTDARCKDPFNYTALPRDQPPLMTCNGCCVKMVRHQRSRYEVVRRMCT 94
Query: 88 SKLDISLFMVDHVCMYEGSGRGHMCFCESD 117
S+L I+LFMVDHVCM E SG GHMCFCE D
Sbjct: 95 SQLQINLFMVDHVCMMESSGNGHMCFCEED 124
>sp|B4LQ44|QVR_DROVI Protein quiver OS=Drosophila virilis GN=qvr PE=3 SV=2
Length = 159
Score = 146 bits (368), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 64/90 (71%), Positives = 72/90 (80%)
Query: 28 RTRSIYCYECDSWKDRRCLDPFNYSVLPIHQPALNPCNGCCVKMVRNSKTEFESVRRTCT 87
+TRSIYCYECDSW D RC DPFNY+ LP QP L CNGCCVKMVR+ ++ +E VRR CT
Sbjct: 35 QTRSIYCYECDSWTDARCKDPFNYTALPRDQPPLMTCNGCCVKMVRHQRSRYEVVRRMCT 94
Query: 88 SKLDISLFMVDHVCMYEGSGRGHMCFCESD 117
S+L I+LFMVDHVCM E SG GHMCFCE D
Sbjct: 95 SQLQINLFMVDHVCMMESSGNGHMCFCEED 124
>sp|B4P641|QVR_DROYA Protein quiver OS=Drosophila yakuba GN=qvr PE=3 SV=1
Length = 158
Score = 145 bits (365), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 64/90 (71%), Positives = 72/90 (80%)
Query: 28 RTRSIYCYECDSWKDRRCLDPFNYSVLPIHQPALNPCNGCCVKMVRNSKTEFESVRRTCT 87
+TRSIYCYECDSW D RC DPFNY+ LP QP L CNGCCVKMVR+ ++ +E VRR CT
Sbjct: 35 QTRSIYCYECDSWTDARCKDPFNYTALPRDQPPLMTCNGCCVKMVRHQRSPYEVVRRMCT 94
Query: 88 SKLDISLFMVDHVCMYEGSGRGHMCFCESD 117
S+L I+LFMVDHVCM E SG GHMCFCE D
Sbjct: 95 SQLQINLFMVDHVCMMESSGNGHMCFCEED 124
>sp|B4HNI3|QVR_DROSE Protein quiver OS=Drosophila sechellia GN=qvr PE=3 SV=2
Length = 158
Score = 145 bits (365), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 64/90 (71%), Positives = 72/90 (80%)
Query: 28 RTRSIYCYECDSWKDRRCLDPFNYSVLPIHQPALNPCNGCCVKMVRNSKTEFESVRRTCT 87
+TRSIYCYECDSW D RC DPFNY+ LP QP L CNGCCVKMVR+ ++ +E VRR CT
Sbjct: 35 QTRSIYCYECDSWTDARCKDPFNYTALPRDQPPLMTCNGCCVKMVRHQRSPYEVVRRMCT 94
Query: 88 SKLDISLFMVDHVCMYEGSGRGHMCFCESD 117
S+L I+LFMVDHVCM E SG GHMCFCE D
Sbjct: 95 SQLQINLFMVDHVCMMESSGNGHMCFCEED 124
>sp|B5A5T4|QVR_DROME Protein quiver OS=Drosophila melanogaster GN=qvr PE=1 SV=2
Length = 158
Score = 145 bits (365), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 64/90 (71%), Positives = 72/90 (80%)
Query: 28 RTRSIYCYECDSWKDRRCLDPFNYSVLPIHQPALNPCNGCCVKMVRNSKTEFESVRRTCT 87
+TRSIYCYECDSW D RC DPFNY+ LP QP L CNGCCVKMVR+ ++ +E VRR CT
Sbjct: 35 QTRSIYCYECDSWTDARCKDPFNYTALPRDQPPLMTCNGCCVKMVRHQRSPYEVVRRMCT 94
Query: 88 SKLDISLFMVDHVCMYEGSGRGHMCFCESD 117
S+L I+LFMVDHVCM E SG GHMCFCE D
Sbjct: 95 SQLQINLFMVDHVCMMESSGNGHMCFCEED 124
>sp|B3NSF6|QVR_DROER Protein quiver OS=Drosophila erecta GN=qvr PE=3 SV=1
Length = 158
Score = 145 bits (365), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 64/90 (71%), Positives = 72/90 (80%)
Query: 28 RTRSIYCYECDSWKDRRCLDPFNYSVLPIHQPALNPCNGCCVKMVRNSKTEFESVRRTCT 87
+TRSIYCYECDSW D RC DPFNY+ LP QP L CNGCCVKMVR+ ++ +E VRR CT
Sbjct: 35 QTRSIYCYECDSWTDARCKDPFNYTALPRDQPPLMTCNGCCVKMVRHQRSPYEVVRRMCT 94
Query: 88 SKLDISLFMVDHVCMYEGSGRGHMCFCESD 117
S+L I+LFMVDHVCM E SG GHMCFCE D
Sbjct: 95 SQLQINLFMVDHVCMMESSGNGHMCFCEED 124
>sp|B4KR21|QVR_DROMO Protein quiver OS=Drosophila mojavensis GN=qvr PE=3 SV=2
Length = 159
Score = 144 bits (364), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 64/90 (71%), Positives = 72/90 (80%)
Query: 28 RTRSIYCYECDSWKDRRCLDPFNYSVLPIHQPALNPCNGCCVKMVRNSKTEFESVRRTCT 87
+TRSIYCYECDSW D RC DPFNY+ LP QP L CNGCCVKMVR+ ++ +E VRR CT
Sbjct: 35 QTRSIYCYECDSWTDARCKDPFNYTALPRDQPPLMTCNGCCVKMVRHQRSPYEVVRRMCT 94
Query: 88 SKLDISLFMVDHVCMYEGSGRGHMCFCESD 117
S+L I+LFMVDHVCM E SG GHMCFCE D
Sbjct: 95 SQLQINLFMVDHVCMMESSGNGHMCFCEED 124
>sp|B4QBL6|QVR_DROSI Protein quiver OS=Drosophila simulans GN=qvr PE=3 SV=2
Length = 158
Score = 144 bits (362), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 63/90 (70%), Positives = 72/90 (80%)
Query: 28 RTRSIYCYECDSWKDRRCLDPFNYSVLPIHQPALNPCNGCCVKMVRNSKTEFESVRRTCT 87
+TRSIYCYECDSW D RC DPF+Y+ LP QP L CNGCCVKMVR+ ++ +E VRR CT
Sbjct: 35 QTRSIYCYECDSWTDARCKDPFHYTALPRDQPPLMTCNGCCVKMVRHQRSRYEVVRRMCT 94
Query: 88 SKLDISLFMVDHVCMYEGSGRGHMCFCESD 117
S+L I+LFMVDHVCM E SG GHMCFCE D
Sbjct: 95 SQLQINLFMVDHVCMMESSGNGHMCFCEED 124
>sp|B5E022|QVR_DROPS Protein quiver OS=Drosophila pseudoobscura pseudoobscura GN=qvr
PE=3 SV=2
Length = 159
Score = 141 bits (355), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 72/118 (61%), Positives = 82/118 (69%), Gaps = 9/118 (7%)
Query: 28 RTRSIYCYECDSWKDRRCLDPFNYSVLPIHQPALNPCNGCCVKMVRNSKTEFESVRRTCT 87
+TRSIYCYECDSW D RC DPFNY+ LP QP L CNGCCVKMVR+ ++ E VRR CT
Sbjct: 36 QTRSIYCYECDSWTDARCKDPFNYTALPRDQPPLMTCNGCCVKMVRHQRSR-EVVRRMCT 94
Query: 88 SKLDISLFMVDHVCMYEGSGRGHMCFCESDRPMIEMVLPSSLDNTLSPPGHHVCLLFT 145
S+L I+LFMVDHVCM E SG GHMCFCE D + SS D L GH + L+ T
Sbjct: 95 SQLQINLFMVDHVCMMESSGNGHMCFCEED------MCNSSKD--LYSHGHQLHLIIT 144
>sp|B3MFC2|QVR_DROAN Protein quiver OS=Drosophila ananassae GN=qvr PE=3 SV=2
Length = 159
Score = 140 bits (353), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 64/91 (70%), Positives = 72/91 (79%), Gaps = 1/91 (1%)
Query: 28 RTRSIYCYECDSWKDRRCLDPFNYSVLPIHQPALNPCNGCCVKMVRNSKTEFESVRR-TC 86
+TRSIYCYECDSW D RC DPFNY+ LP QP L CNGCCVKMVR+ ++ +E VRR C
Sbjct: 35 QTRSIYCYECDSWTDARCKDPFNYTALPRDQPPLMTCNGCCVKMVRHQRSPYEVVRRMMC 94
Query: 87 TSKLDISLFMVDHVCMYEGSGRGHMCFCESD 117
TS+L I+LFMVDHVCM E SG GHMCFCE D
Sbjct: 95 TSQLQINLFMVDHVCMMESSGNGHMCFCEED 125
>sp|P64752|Y921_MYCBO Uncharacterized protein Mb0921c OS=Mycobacterium bovis (strain ATCC
BAA-935 / AF2122/97) GN=Mb0921c PE=4 SV=1
Length = 535
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 67/149 (44%), Gaps = 16/149 (10%)
Query: 126 PSSLDNTLSPPGHHVCLLFTQFTPYKLAGDRDWTEEDKANYATNVFSSIEQYCPGFTQDI 185
PS L L G +F TP+ + GD TE V +S+ QD+
Sbjct: 381 PSILSARLRDAGAQTLTVFGLHTPHSVFGD---TEGLAERLTAAVLASLNSVLAEPIQDV 437
Query: 186 VGYEILTPP--------DLEKEFGLTGGNIFHGALSLNQLLFNRPLPIQGPSSPFTLI-- 235
+ + + P DL++ G+TGGNIFHGALS + P+ P+ + +
Sbjct: 438 LWTDAQSKPCIETTTTLDLQRTLGMTGGNIFHGALSWP--FADNDDPLDTPARQWGVATD 495
Query: 236 -PHLLLCGSGAHPGGGVCGAPGYIAAQMV 263
++LCGSGA GG V G G+ AA V
Sbjct: 496 HERIMLCGSGARRGGAVSGIGGHNAAMAV 524
>sp|P64751|Y897_MYCTU Uncharacterized protein Rv0897c/MT0921 OS=Mycobacterium
tuberculosis GN=Rv0897c PE=4 SV=1
Length = 535
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 67/149 (44%), Gaps = 16/149 (10%)
Query: 126 PSSLDNTLSPPGHHVCLLFTQFTPYKLAGDRDWTEEDKANYATNVFSSIEQYCPGFTQDI 185
PS L L G +F TP+ + GD TE V +S+ QD+
Sbjct: 381 PSILSARLRDAGAQTLTVFGLHTPHSVFGD---TEGLAERLTAAVLASLNSVLAEPIQDV 437
Query: 186 VGYEILTPP--------DLEKEFGLTGGNIFHGALSLNQLLFNRPLPIQGPSSPFTLI-- 235
+ + + P DL++ G+TGGNIFHGALS + P+ P+ + +
Sbjct: 438 LWTDAQSKPCIETTTTLDLQRTLGMTGGNIFHGALSWP--FADNDDPLDTPARQWGVATD 495
Query: 236 -PHLLLCGSGAHPGGGVCGAPGYIAAQMV 263
++LCGSGA GG V G G+ AA V
Sbjct: 496 HERIMLCGSGARRGGAVSGIGGHNAAMAV 524
>sp|P06108|P49_STRLI Protein p49 OS=Streptomyces lividans GN=p49 PE=4 SV=1
Length = 469
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 69/154 (44%), Gaps = 15/154 (9%)
Query: 117 DRPMIEMVLPSSLDNTLSPPGHHVCLLFTQFTPYKLAGDRDWTEEDKANYATNVFSSIEQ 176
+RP + V PS D T +P G HV + P GD E + +E+
Sbjct: 329 ERPFLITVQPSVADPTRAPAGKHVFWAYGH-VPNGWNGDLTDAMERQ----------LER 377
Query: 177 YCPGFTQDIVGYEILTPPDLE-KEFGLTGGNIFHGALSLNQLLFNRPLPIQGPSSPFTLI 235
+ PGF ++ P +L + GG+I GA+S QLL + + S+P
Sbjct: 378 FAPGFRDRVLARATAGPAELAARNANYVGGDISSGAVSGLQLLLRPKISLFPYSTPH--- 434
Query: 236 PHLLLCGSGAHPGGGVCGAPGYIAAQMVNRLMRK 269
P + +C S PG GV G G+ AA+ V R +R+
Sbjct: 435 PAVFICSSATPPGPGVHGMSGHNAAKAVWRRLRQ 468
>sp|P22871|CRTI_ESCVU Phytoene desaturase (lycopene-forming) OS=Escherichia vulneris
GN=crtI PE=3 SV=1
Length = 492
Score = 47.8 bits (112), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 58/138 (42%), Gaps = 16/138 (11%)
Query: 126 PSSLDNTLSPPGHHVCLLFTQFTPYKLAGDR--DWTEEDKANYATNVFSSIEQ-YCPGFT 182
P D +L+PPG C F P G+ DW +E +F +E+ Y PG
Sbjct: 355 PCVTDPSLAPPG---CASFYVLAPVPHLGNAPLDWAQEGP-KLRDRIFDYLEERYMPGLR 410
Query: 183 QDIVGYEILTPPDLEKEFGLTGGNIFHGALSLNQLLFNRPLPIQGPSSPFTLIPHLLLCG 242
+V I TP D G+ F L Q + RP + + I +L L G
Sbjct: 411 SQLVTQRIFTPADFHDTLDAHLGSAFSIEPLLTQSAWFRP------HNRDSDIANLYLVG 464
Query: 243 SGAHPGGGVCGAPGYIAA 260
+G HPG G+ PG +A+
Sbjct: 465 AGTHPGAGI---PGVVAS 479
>sp|P21685|CRTI_PANAN Phytoene desaturase (lycopene-forming) OS=Pantoea ananas GN=crtI
PE=1 SV=1
Length = 492
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 58/138 (42%), Gaps = 13/138 (9%)
Query: 126 PSSLDNTLSPPGHHVCLLFTQFTPYKLAG--DRDWTEEDKANYATNVFSSIEQ-YCPGFT 182
P D++L+P G C + P G + DWT E +F+ +EQ Y PG
Sbjct: 355 PCVTDSSLAPEG---CGSYYVLAPVPHLGTANLDWTVEGP-KLRDRIFAYLEQHYMPGLR 410
Query: 183 QDIVGYEILTPPDLEKEFGLTGGNIFHGALSLNQLLFNRPLPIQGPSSPFTLIPHLLLCG 242
+V + + TP D + G+ F L Q + RP + I +L L G
Sbjct: 411 SQLVTHRMFTPFDFRDQLNAYHGSAFSVEPVLTQSAWFRP------HNRDKTITNLYLVG 464
Query: 243 SGAHPGGGVCGAPGYIAA 260
+G HPG G+ G G A
Sbjct: 465 AGTHPGAGIPGVIGSAKA 482
>sp|P54978|CRTI_PARSN Phytoene desaturase (lycopene-forming) OS=Paracoccus sp. (strain
N81106 / MBIC 01143) GN=crtI PE=3 SV=2
Length = 501
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 54/136 (39%), Gaps = 9/136 (6%)
Query: 126 PSSLDNTLSPPGHHVCLLFTQFTPYKLAGDRDWTEEDKANYATNVFSSIEQ-YCPGFTQD 184
P + D ++PPG + P+ D DW E YA + +S+E+ P +
Sbjct: 362 PCTTDPEMAPPGMSTHYVLAP-VPHLGRADIDWAVEGP-RYADRILASLEERLIPNLRAN 419
Query: 185 IVGYEILTPPDLEKEFGLTGGNIFHGALSLNQLLFNRPLPIQGPSSPFTLIPHLLLCGSG 244
+ I TP D E G+ F L Q + R P + I + L G+G
Sbjct: 420 LTTTRIFTPSDFASELNAHHGSAFSVEPILTQSAWFR------PHNRDKTIRNFYLVGAG 473
Query: 245 AHPGGGVCGAPGYIAA 260
HPG G+ G G A
Sbjct: 474 THPGAGIPGVVGSAKA 489
>sp|Q4L975|CRTN_STAHJ Dehydrosqualene desaturase OS=Staphylococcus haemolyticus (strain
JCSC1435) GN=crtN PE=3 SV=2
Length = 501
Score = 44.7 bits (104), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 83/212 (39%), Gaps = 28/212 (13%)
Query: 52 SVLPIHQPALN--PCNGCCVKMVRNSKTEFESVRRTCTSKLDISLFMVDHVCMYEGSGRG 109
+++P+H P N P + ++ + + R KL + H ++ RG
Sbjct: 284 NLMPVHSPLKNYSPEKVDNMDYSCSAFLIYAGINRQLRDKLHV------HNVVFARDFRG 337
Query: 110 HMCFCES----DRPMIEMVLPSSLDNTLSPP---GHHVCLLFTQFTPYKLAGDRDWTEED 162
++ S D P + + PS D L+P G +V + P G+ DW + +
Sbjct: 338 NIDDIFSGKMPDDPSLYLYFPSVEDEALAPKDQTGMYVLMP----VPELKTGEIDWNDPN 393
Query: 163 KANYATNV-FSSIE--QYCPGFTQDIVGYEILTPPDLEKEFGLTGGNIFHGALSLNQLLF 219
A +V ++ +E + QD+V + TP D E + G+ F +L Q +
Sbjct: 394 MVEKAKDVIYNKLETIEALKDIRQDVVSETVFTPLDFESRYNAKFGSAFGLMPTLTQSNY 453
Query: 220 NRPLPIQGPSSPFTLIPHLLLCGSGAHPGGGV 251
RP + L G+ HPG GV
Sbjct: 454 YRPPNVSRDYK------DLYFAGASTHPGAGV 479
>sp|Q6GDN7|CRTN_STAAR Dehydrosqualene desaturase OS=Staphylococcus aureus (strain
MRSA252) GN=crtN PE=3 SV=1
Length = 502
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 57/140 (40%), Gaps = 11/140 (7%)
Query: 116 SDRPMIEMVLPSSLDNTLSPPGHHVCLLFTQFTPYKLAGDRDWTEEDKANYATNV----F 171
S P I + +P+ D +L+P G + K DW++E + +V
Sbjct: 348 SHDPSIYVYVPAVADKSLAPQGQTGIYVLMPTPELKTGSGIDWSDEALTDQIKDVIYRKL 407
Query: 172 SSIEQYCPGFTQDIVGYEILTPPDLEKEFGLTGGNIFHGALSLNQLLFNRPLPIQGPSSP 231
++IE + IV I TP D E+ + G+ F +L Q + RP Q S
Sbjct: 408 ATIEVF-EDIKSHIVSETIFTPNDFEQTYHAKFGSAFGLMPTLAQSNYYRP---QNVSRD 463
Query: 232 FTLIPHLLLCGSGAHPGGGV 251
+ L G+ HPG GV
Sbjct: 464 YK---DLYFAGASTHPGAGV 480
>sp|P54980|CRTI_RHOS4 Phytoene desaturase (neurosporene-forming) OS=Rhodobacter
sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM
158) GN=crtI PE=3 SV=2
Length = 518
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 57/141 (40%), Gaps = 9/141 (6%)
Query: 126 PSSLDNTLSPPGHHVCLLFTQFTPYKLAGDRDWTEEDKANYATNVFSSIEQYCPGFTQDI 185
PS D T++P G + K A DW + Y +V +EQ PG + I
Sbjct: 367 PSITDPTVAPEGDDTFYALSPVPHLKQAQPVDW-QAVAEPYRESVLEVLEQSMPGIGERI 425
Query: 186 VGYEILTPPDLEKEFGLTGGNIFHGALSLNQLLFNRPLPIQGPSSPFTLIPHLLLCGSGA 245
+ TP + G F + Q + RP I + +L L G+G
Sbjct: 426 GPSLVFTPETFRDRYLSPWGAGFSIEPRILQSAWFRPHNIS------EEVANLFLVGAGT 479
Query: 246 HPGGGVCGAPGYIAAQMVNRL 266
HPG GV G G +A+++ +L
Sbjct: 480 HPGAGVPGVIG--SAEVMAKL 498
>sp|Q7A3E2|CRTN_STAAN Dehydrosqualene desaturase OS=Staphylococcus aureus (strain N315)
GN=crtN PE=1 SV=1
Length = 502
Score = 41.6 bits (96), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 62/161 (38%), Gaps = 15/161 (9%)
Query: 99 HVCMYEGSGRGHMCFCESDR----PMIEMVLPSSLDNTLSPPGHHVCLLFTQFTPYKLAG 154
H ++ RG++ R P I + +P+ D +L+P G + K
Sbjct: 327 HNVIFSDDFRGNIEEIFEGRLSYDPSIYVYVPAVADKSLAPEGKTGIYVLMPTPELKTGS 386
Query: 155 DRDWTEEDKANYATNV----FSSIEQYCPGFTQDIVGYEILTPPDLEKEFGLTGGNIFHG 210
DW++E + ++IE + IV I TP D E+ + G+ F
Sbjct: 387 GIDWSDEALTQQIKEIIYRKLATIEVF-EDIKSHIVSETIFTPNDFEQTYHAKFGSAFGL 445
Query: 211 ALSLNQLLFNRPLPIQGPSSPFTLIPHLLLCGSGAHPGGGV 251
+L Q + RP Q S + L G+ HPG GV
Sbjct: 446 MPTLAQSNYYRP---QNVSRDYK---DLYFAGASTHPGAGV 480
>sp|Q99R76|CRTN_STAAM Dehydrosqualene desaturase OS=Staphylococcus aureus (strain Mu50 /
ATCC 700699) GN=crtN PE=3 SV=1
Length = 502
Score = 41.6 bits (96), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 62/161 (38%), Gaps = 15/161 (9%)
Query: 99 HVCMYEGSGRGHMCFCESDR----PMIEMVLPSSLDNTLSPPGHHVCLLFTQFTPYKLAG 154
H ++ RG++ R P I + +P+ D +L+P G + K
Sbjct: 327 HNVIFSDDFRGNIEEIFEGRLSYDPSIYVYVPAVADKSLAPEGKTGIYVLMPTPELKTGS 386
Query: 155 DRDWTEEDKANYATNV----FSSIEQYCPGFTQDIVGYEILTPPDLEKEFGLTGGNIFHG 210
DW++E + ++IE + IV I TP D E+ + G+ F
Sbjct: 387 GIDWSDEALTQQIKEIIYRKLATIEVF-EDIKSHIVSETIFTPNDFEQTYHAKFGSAFGL 445
Query: 211 ALSLNQLLFNRPLPIQGPSSPFTLIPHLLLCGSGAHPGGGV 251
+L Q + RP Q S + L G+ HPG GV
Sbjct: 446 MPTLAQSNYYRP---QNVSRDYK---DLYFAGASTHPGAGV 480
>sp|O07855|CRTN_STAAE Dehydrosqualene desaturase OS=Staphylococcus aureus (strain Newman)
GN=crtN PE=1 SV=2
Length = 502
Score = 41.6 bits (96), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 62/161 (38%), Gaps = 15/161 (9%)
Query: 99 HVCMYEGSGRGHMCFCESDR----PMIEMVLPSSLDNTLSPPGHHVCLLFTQFTPYKLAG 154
H ++ RG++ R P I + +P+ D +L+P G + K
Sbjct: 327 HNVIFSDDFRGNIEEIFEGRLSYDPSIYVYVPAVADKSLAPEGKTGIYVLMPTPELKTGS 386
Query: 155 DRDWTEEDKANYATNV----FSSIEQYCPGFTQDIVGYEILTPPDLEKEFGLTGGNIFHG 210
DW++E + ++IE + IV I TP D E+ + G+ F
Sbjct: 387 GIDWSDEALTQQIKEIIYRKLATIEVF-EDIKSHIVSETIFTPNDFEQTYHAKFGSAFGL 445
Query: 211 ALSLNQLLFNRPLPIQGPSSPFTLIPHLLLCGSGAHPGGGV 251
+L Q + RP Q S + L G+ HPG GV
Sbjct: 446 MPTLAQSNYYRP---QNVSRDYK---DLYFAGASTHPGAGV 480
>sp|Q2FV60|CRTN_STAA8 Dehydrosqualene desaturase OS=Staphylococcus aureus (strain NCTC
8325) GN=crtN PE=3 SV=1
Length = 502
Score = 41.6 bits (96), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 62/161 (38%), Gaps = 15/161 (9%)
Query: 99 HVCMYEGSGRGHMCFCESDR----PMIEMVLPSSLDNTLSPPGHHVCLLFTQFTPYKLAG 154
H ++ RG++ R P I + +P+ D +L+P G + K
Sbjct: 327 HNVIFSDDFRGNIEEIFEGRLSYDPSIYVYVPAVADKSLAPEGKTGIYVLMPTPELKTGS 386
Query: 155 DRDWTEEDKANYATNV----FSSIEQYCPGFTQDIVGYEILTPPDLEKEFGLTGGNIFHG 210
DW++E + ++IE + IV I TP D E+ + G+ F
Sbjct: 387 GIDWSDEALTQQIKEIIYRKLATIEVF-EDIKSHIVSETIFTPNDFEQTYHAKFGSAFGL 445
Query: 211 ALSLNQLLFNRPLPIQGPSSPFTLIPHLLLCGSGAHPGGGV 251
+L Q + RP Q S + L G+ HPG GV
Sbjct: 446 MPTLAQSNYYRP---QNVSRDYK---DLYFAGASTHPGAGV 480
>sp|Q2FDU6|CRTN_STAA3 Dehydrosqualene desaturase OS=Staphylococcus aureus (strain USA300)
GN=crtN PE=3 SV=1
Length = 502
Score = 41.6 bits (96), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 62/161 (38%), Gaps = 15/161 (9%)
Query: 99 HVCMYEGSGRGHMCFCESDR----PMIEMVLPSSLDNTLSPPGHHVCLLFTQFTPYKLAG 154
H ++ RG++ R P I + +P+ D +L+P G + K
Sbjct: 327 HNVIFSDDFRGNIEEIFEGRLSYDPSIYVYVPAVADKSLAPEGKTGIYVLMPTPELKTGS 386
Query: 155 DRDWTEEDKANYATNV----FSSIEQYCPGFTQDIVGYEILTPPDLEKEFGLTGGNIFHG 210
DW++E + ++IE + IV I TP D E+ + G+ F
Sbjct: 387 GIDWSDEALTQQIKEIIYRKLATIEVF-EDIKSHIVSETIFTPNDFEQTYHAKFGSAFGL 445
Query: 211 ALSLNQLLFNRPLPIQGPSSPFTLIPHLLLCGSGAHPGGGV 251
+L Q + RP Q S + L G+ HPG GV
Sbjct: 446 MPTLAQSNYYRP---QNVSRDYK---DLYFAGASTHPGAGV 480
>sp|Q2YWE8|CRTN_STAAB Dehydrosqualene desaturase OS=Staphylococcus aureus (strain bovine
RF122 / ET3-1) GN=crtN PE=3 SV=1
Length = 502
Score = 41.6 bits (96), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 62/161 (38%), Gaps = 15/161 (9%)
Query: 99 HVCMYEGSGRGHMCFCESDR----PMIEMVLPSSLDNTLSPPGHHVCLLFTQFTPYKLAG 154
H ++ RG++ R P I + +P+ D +L+P G + K
Sbjct: 327 HNVIFSDDFRGNIEEIFEGRLSYDPSIYVYVPAVADKSLAPEGKTGIYVLMPTPELKTGS 386
Query: 155 DRDWTEEDKANYATNV----FSSIEQYCPGFTQDIVGYEILTPPDLEKEFGLTGGNIFHG 210
DW++E + ++IE + IV I TP D E+ + G+ F
Sbjct: 387 GIDWSDEALTQQIKEIIYRKLATIEVF-EDIKSHIVSETIFTPNDFEQTYHAKFGSAFGL 445
Query: 211 ALSLNQLLFNRPLPIQGPSSPFTLIPHLLLCGSGAHPGGGV 251
+L Q + RP Q S + L G+ HPG GV
Sbjct: 446 MPTLAQSNYYRP---QNVSRDYK---DLYFAGASTHPGAGV 480
>sp|Q5HCY9|CRTN_STAAC Dehydrosqualene desaturase OS=Staphylococcus aureus (strain COL)
GN=crtN PE=3 SV=1
Length = 502
Score = 41.6 bits (96), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 62/161 (38%), Gaps = 15/161 (9%)
Query: 99 HVCMYEGSGRGHMCFCESDR----PMIEMVLPSSLDNTLSPPGHHVCLLFTQFTPYKLAG 154
H ++ RG++ R P I + +P+ D +L+P G + K
Sbjct: 327 HNVIFSDDFRGNIEEIFEGRLSYDPSIYVYVPAVADKSLAPEGKTGIYVLMPTPELKTGS 386
Query: 155 DRDWTEEDKANYATNV----FSSIEQYCPGFTQDIVGYEILTPPDLEKEFGLTGGNIFHG 210
DW++E + ++IE + IV I TP D E+ + G+ F
Sbjct: 387 GIDWSDEALTQQIKEIIYRKLATIEVF-EDIKSHIVSETIFTPNDFEQTYHAKFGSAFGL 445
Query: 211 ALSLNQLLFNRPLPIQGPSSPFTLIPHLLLCGSGAHPGGGV 251
+L Q + RP Q S + L G+ HPG GV
Sbjct: 446 MPTLAQSNYYRP---QNVSRDYK---DLYFAGASTHPGAGV 480
>sp|Q8NUQ6|CRTN_STAAW Dehydrosqualene desaturase OS=Staphylococcus aureus (strain MW2)
GN=crtN PE=3 SV=1
Length = 502
Score = 41.2 bits (95), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 62/161 (38%), Gaps = 15/161 (9%)
Query: 99 HVCMYEGSGRGHMCFCESDR----PMIEMVLPSSLDNTLSPPGHHVCLLFTQFTPYKLAG 154
H ++ RG++ R P I + +P+ D +L+P G + K
Sbjct: 327 HNVIFSDDFRGNIEEIFEGRLSYDPSIYVYVPAVADKSLAPEGKTGIYVLMPTPELKTGS 386
Query: 155 DRDWTEEDKANYATNV----FSSIEQYCPGFTQDIVGYEILTPPDLEKEFGLTGGNIFHG 210
DW++E + ++IE + IV I TP D E+ + G+ F
Sbjct: 387 GIDWSDEALTQQIKEIIYRKLATIEVF-EDIKSHIVSETIFTPNDFEQTYHAKFGSAFGL 445
Query: 211 ALSLNQLLFNRPLPIQGPSSPFTLIPHLLLCGSGAHPGGGV 251
+L Q + RP Q S + L G+ HPG GV
Sbjct: 446 MPTLAQSNYYRP---QNVSRDYK---DLYFAGASTHPGAGV 480
>sp|Q6G6B3|CRTN_STAAS Dehydrosqualene desaturase OS=Staphylococcus aureus (strain
MSSA476) GN=crtN PE=3 SV=1
Length = 502
Score = 41.2 bits (95), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 62/161 (38%), Gaps = 15/161 (9%)
Query: 99 HVCMYEGSGRGHMCFCESDR----PMIEMVLPSSLDNTLSPPGHHVCLLFTQFTPYKLAG 154
H ++ RG++ R P I + +P+ D +L+P G + K
Sbjct: 327 HNVIFSDDFRGNIEEIFEGRLSYDPSIYVYVPAVADKSLAPEGKTGIYVLMPTPELKTGS 386
Query: 155 DRDWTEEDKANYATNV----FSSIEQYCPGFTQDIVGYEILTPPDLEKEFGLTGGNIFHG 210
DW++E + ++IE + IV I TP D E+ + G+ F
Sbjct: 387 GIDWSDEALTQQIKEIIYRKLATIEVF-EDIKSHIVSETIFTPNDFEQTYHAKFGSAFGL 445
Query: 211 ALSLNQLLFNRPLPIQGPSSPFTLIPHLLLCGSGAHPGGGV 251
+L Q + RP Q S + L G+ HPG GV
Sbjct: 446 MPTLAQSNYYRP---QNVSRDYK---DLYFAGASTHPGAGV 480
>sp|Q6G6B0|CRTP_STAAS Diapolycopene oxygenase OS=Staphylococcus aureus (strain MSSA476)
GN=crtP PE=3 SV=1
Length = 497
Score = 40.4 bits (93), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 60/136 (44%), Gaps = 10/136 (7%)
Query: 117 DRPMIEMVLPSSLDNTLSPPGHHVCLLFTQFTPYKLAGDRDWTEEDKANYATNVFSSIEQ 176
D P I +V + D+T +P G+ + PY D+ +T ED A + + +E+
Sbjct: 348 DDPTIYLVNTNKTDHTQAPVGYENIKVLPHI-PY--IQDQPFTTEDYAKFRDKILDKLEK 404
Query: 177 Y-CPGFTQDIVGYEILTPPDLEKEFGLTGGNIFHGALSLNQLLFNRPLPIQGPSSPFTLI 235
+ I+ ++ TP D+EK + G I+ G ++ + N+ S F
Sbjct: 405 MGLTDLRKHIIYEDVWTPEDIEKNYRSNRGAIY-GVVADKKK--NKGFKFPKESQYF--- 458
Query: 236 PHLLLCGSGAHPGGGV 251
+L G +PGGG+
Sbjct: 459 ENLYFVGGSVNPGGGI 474
>sp|Q2YWE5|CRTP_STAAB Diapolycopene oxygenase OS=Staphylococcus aureus (strain bovine
RF122 / ET3-1) GN=crtP PE=3 SV=1
Length = 497
Score = 40.0 bits (92), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 60/136 (44%), Gaps = 10/136 (7%)
Query: 117 DRPMIEMVLPSSLDNTLSPPGHHVCLLFTQFTPYKLAGDRDWTEEDKANYATNVFSSIEQ 176
D P I +V + D+T +P G+ + PY D+ +T ED A + + +E+
Sbjct: 348 DDPTIYLVNTNKTDHTQAPVGYENIKVLPHI-PY--IQDQPFTTEDYAKFRDKILDKLEK 404
Query: 177 Y-CPGFTQDIVGYEILTPPDLEKEFGLTGGNIFHGALSLNQLLFNRPLPIQGPSSPFTLI 235
+ I+ ++ TP D+EK + G I+ G ++ + N+ S F
Sbjct: 405 MGLTDLRKHIIYEDVWTPEDIEKNYRSNRGAIY-GVVADKKK--NKGFKFTKESQYF--- 458
Query: 236 PHLLLCGSGAHPGGGV 251
+L G +PGGG+
Sbjct: 459 ENLYFVGGSVNPGGGM 474
>sp|Q8NUQ3|CRTP_STAAW Diapolycopene oxygenase OS=Staphylococcus aureus (strain MW2)
GN=crtP PE=3 SV=1
Length = 497
Score = 39.7 bits (91), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 57/136 (41%), Gaps = 10/136 (7%)
Query: 117 DRPMIEMVLPSSLDNTLSPPGHHVCLLFTQFTPYKLAGDRDWTEEDKANYATNVFSSIEQ 176
D P I +V + D+T +P G+ + PY D+ +T ED A + + +E+
Sbjct: 348 DDPTIYLVNTNKTDHTQAPVGYENIKVLPHI-PY--IQDQPFTTEDYAKFRDKILDKLEK 404
Query: 177 Y-CPGFTQDIVGYEILTPPDLEKEFGLTGGNIFHGALSLNQLLFNRPLPIQGPSSPFTLI 235
+ I+ ++ TP D+EK + G I+ + N+ S F
Sbjct: 405 MGLTDLRKHIIYEDVWTPEDIEKNYRSNRGAIYGFVADKKK---NKGFKFPKESQYF--- 458
Query: 236 PHLLLCGSGAHPGGGV 251
+L G +PGGG+
Sbjct: 459 ENLYFVGGSVNPGGGI 474
>sp|Q6GDN5|CRTP_STAAR Diapolycopene oxygenase OS=Staphylococcus aureus (strain MRSA252)
GN=crtP PE=3 SV=1
Length = 497
Score = 39.7 bits (91), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 60/136 (44%), Gaps = 10/136 (7%)
Query: 117 DRPMIEMVLPSSLDNTLSPPGHHVCLLFTQFTPYKLAGDRDWTEEDKANYATNVFSSIEQ 176
D P I +V + D+T +P G+ + PY D+ +T ED A + + +E+
Sbjct: 348 DDPTIYLVNTNKTDHTQAPVGYENIKVLPHI-PY--IQDQPFTTEDYAKFRDKILDKLEK 404
Query: 177 Y-CPGFTQDIVGYEILTPPDLEKEFGLTGGNIFHGALSLNQLLFNRPLPIQGPSSPFTLI 235
+ I+ ++ TP D+EK + G I+ G ++ + N+ S F
Sbjct: 405 MGLTDLRKHIIYEDVWTPEDIEKNYRSNRGAIY-GVVADKKK--NKGFKFPKESQYF--- 458
Query: 236 PHLLLCGSGAHPGGGV 251
+L G +PGGG+
Sbjct: 459 ENLYFVGGSVNPGGGM 474
>sp|Q53589|CRTP_STAAE Diapolycopene oxygenase OS=Staphylococcus aureus (strain Newman)
GN=crtP PE=3 SV=2
Length = 497
Score = 39.7 bits (91), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 60/136 (44%), Gaps = 10/136 (7%)
Query: 117 DRPMIEMVLPSSLDNTLSPPGHHVCLLFTQFTPYKLAGDRDWTEEDKANYATNVFSSIEQ 176
D P I +V + D+T +P G+ + PY D+ +T ED A + + +E+
Sbjct: 348 DDPTIYLVNTNKTDHTQAPVGYENIKVLPHI-PY--IQDQPFTTEDYAKFRDKILDKLEK 404
Query: 177 Y-CPGFTQDIVGYEILTPPDLEKEFGLTGGNIFHGALSLNQLLFNRPLPIQGPSSPFTLI 235
+ I+ ++ TP D+EK + G I+ G ++ + N+ S F
Sbjct: 405 MGLTDLRKHIIYEDVWTPEDIEKNYRSNRGAIY-GVVADKKK--NKGFKFPKESQYF--- 458
Query: 236 PHLLLCGSGAHPGGGV 251
+L G +PGGG+
Sbjct: 459 ENLYFVGGSVNPGGGM 474
>sp|Q5HCY6|CRTP_STAAC Diapolycopene oxygenase OS=Staphylococcus aureus (strain COL)
GN=crtP PE=3 SV=1
Length = 497
Score = 39.7 bits (91), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 60/136 (44%), Gaps = 10/136 (7%)
Query: 117 DRPMIEMVLPSSLDNTLSPPGHHVCLLFTQFTPYKLAGDRDWTEEDKANYATNVFSSIEQ 176
D P I +V + D+T +P G+ + PY D+ +T ED A + + +E+
Sbjct: 348 DDPTIYLVNTNKTDHTQAPVGYENIKVLPHI-PY--IQDQPFTTEDYAKFRDKILDKLEK 404
Query: 177 Y-CPGFTQDIVGYEILTPPDLEKEFGLTGGNIFHGALSLNQLLFNRPLPIQGPSSPFTLI 235
+ I+ ++ TP D+EK + G I+ G ++ + N+ S F
Sbjct: 405 MGLTDLRKHIIYEDVWTPEDIEKNYRSNRGAIY-GVVADKKK--NKGFKFPKESQYF--- 458
Query: 236 PHLLLCGSGAHPGGGV 251
+L G +PGGG+
Sbjct: 459 ENLYFVGGSVNPGGGM 474
>sp|Q2FV57|CRTP_STAA8 Diapolycopene oxygenase OS=Staphylococcus aureus (strain NCTC 8325)
GN=crtP PE=1 SV=1
Length = 497
Score = 39.7 bits (91), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 60/136 (44%), Gaps = 10/136 (7%)
Query: 117 DRPMIEMVLPSSLDNTLSPPGHHVCLLFTQFTPYKLAGDRDWTEEDKANYATNVFSSIEQ 176
D P I +V + D+T +P G+ + PY D+ +T ED A + + +E+
Sbjct: 348 DDPTIYLVNTNKTDHTQAPVGYENIKVLPHI-PY--IQDQPFTTEDYAKFRDKILDKLEK 404
Query: 177 Y-CPGFTQDIVGYEILTPPDLEKEFGLTGGNIFHGALSLNQLLFNRPLPIQGPSSPFTLI 235
+ I+ ++ TP D+EK + G I+ G ++ + N+ S F
Sbjct: 405 MGLTDLRKHIIYEDVWTPEDIEKNYRSNRGAIY-GVVADKKK--NKGFKFPKESQYF--- 458
Query: 236 PHLLLCGSGAHPGGGV 251
+L G +PGGG+
Sbjct: 459 ENLYFVGGSVNPGGGM 474
>sp|Q2FDU3|CRTP_STAA3 Diapolycopene oxygenase OS=Staphylococcus aureus (strain USA300)
GN=crtP PE=3 SV=1
Length = 497
Score = 39.7 bits (91), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 60/136 (44%), Gaps = 10/136 (7%)
Query: 117 DRPMIEMVLPSSLDNTLSPPGHHVCLLFTQFTPYKLAGDRDWTEEDKANYATNVFSSIEQ 176
D P I +V + D+T +P G+ + PY D+ +T ED A + + +E+
Sbjct: 348 DDPTIYLVNTNKTDHTQAPVGYENIKVLPHI-PY--IQDQPFTTEDYAKFRDKILDKLEK 404
Query: 177 Y-CPGFTQDIVGYEILTPPDLEKEFGLTGGNIFHGALSLNQLLFNRPLPIQGPSSPFTLI 235
+ I+ ++ TP D+EK + G I+ G ++ + N+ S F
Sbjct: 405 MGLTDLRKHIIYEDVWTPEDIEKNYRSNRGAIY-GVVADKKK--NKGFKFPKESQYF--- 458
Query: 236 PHLLLCGSGAHPGGGV 251
+L G +PGGG+
Sbjct: 459 ENLYFVGGSVNPGGGM 474
>sp|Q7A3D9|CRTP_STAAN Diapolycopene oxygenase OS=Staphylococcus aureus (strain N315)
GN=crtP PE=1 SV=1
Length = 497
Score = 39.3 bits (90), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 60/136 (44%), Gaps = 10/136 (7%)
Query: 117 DRPMIEMVLPSSLDNTLSPPGHHVCLLFTQFTPYKLAGDRDWTEEDKANYATNVFSSIEQ 176
D P I +V + D+T +P G+ + PY D+ +T ED A + + +E+
Sbjct: 348 DDPTIYLVNTNKTDHTQAPVGYENIKVLPHI-PY--IQDQPFTTEDYAKFRDKILDKLEK 404
Query: 177 Y-CPGFTQDIVGYEILTPPDLEKEFGLTGGNIFHGALSLNQLLFNRPLPIQGPSSPFTLI 235
+ I+ ++ TP D+EK + G I+ G ++ + N+ S F
Sbjct: 405 MGLTDLRKHIIYEDVWTPEDIEKNYRSNRGAIY-GVVADKKK--NKGFKFPKESQYF--- 458
Query: 236 PHLLLCGSGAHPGGGV 251
+L G +PGGG+
Sbjct: 459 ENLYFVGGSVNPGGGM 474
>sp|Q99R73|CRTP_STAAM Diapolycopene oxygenase OS=Staphylococcus aureus (strain Mu50 /
ATCC 700699) GN=crtP PE=1 SV=1
Length = 497
Score = 39.3 bits (90), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 60/136 (44%), Gaps = 10/136 (7%)
Query: 117 DRPMIEMVLPSSLDNTLSPPGHHVCLLFTQFTPYKLAGDRDWTEEDKANYATNVFSSIEQ 176
D P I +V + D+T +P G+ + PY D+ +T ED A + + +E+
Sbjct: 348 DDPTIYLVNTNKTDHTQAPVGYENIKVLPHI-PY--IQDQPFTTEDYAKFRDKILDKLEK 404
Query: 177 Y-CPGFTQDIVGYEILTPPDLEKEFGLTGGNIFHGALSLNQLLFNRPLPIQGPSSPFTLI 235
+ I+ ++ TP D+EK + G I+ G ++ + N+ S F
Sbjct: 405 MGLTDLRKHIIYEDVWTPEDIEKNYRSNRGAIY-GVVADKKK--NKGFKFPKESQYF--- 458
Query: 236 PHLLLCGSGAHPGGGV 251
+L G +PGGG+
Sbjct: 459 ENLYFVGGSVNPGGGM 474
>sp|P17054|CRTI_RHOCB Phytoene desaturase (neurosporene-forming) OS=Rhodobacter
capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003)
GN=crtI PE=1 SV=1
Length = 524
Score = 38.1 bits (87), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 52/141 (36%), Gaps = 10/141 (7%)
Query: 126 PSSLDNTLSPPGHHVCLLFTQFTPYKLAGDRDWTEEDKANYATNVFSSIEQ-YCPGFTQD 184
PS D T +P G + + DW+ E + Y V IE+ PG +
Sbjct: 366 PSVTDPTAAPKGDDTFYVLSPVPNLGFDNGVDWSVEAE-KYKAKVLKVIEERLLPGVAEK 424
Query: 185 IVGYEILTPPDLEKEFGLTGGNIFHGALSLNQLLFNRPLPIQGPSSPFTLIPHLLLCGSG 244
I + TP + G F + Q + RP + + L L G+G
Sbjct: 425 ITEEVVFTPETFRDRYLSPLGAGFSLEPRILQSAWFRP------HNASEEVDGLYLVGAG 478
Query: 245 AHPGGGVCG--APGYIAAQMV 263
HPG GV G + AQM+
Sbjct: 479 THPGAGVPSVIGSGELVAQMI 499
>sp|Q8S4R4|CRTSO_SOLLC Prolycopene isomerase, chloroplastic OS=Solanum lycopersicum
GN=CRTISO PE=1 SV=1
Length = 615
Score = 37.0 bits (84), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 121 IEMVLPSSLDNTLSPPGHHVCLLFTQFTPYKLAG--DRDWTEEDKANYATNVFSSIEQYC 178
I + +P+ LD++L+P GHH+ +FT + G +D+ E K A + S +E+
Sbjct: 448 IFLSIPTVLDSSLAPEGHHILHIFTTSSIEDWEGLSPKDY-EAKKEVVAERIISRLEKTL 506
Query: 179 -PGFTQDIVGYEILTP 193
PG I+ E+ TP
Sbjct: 507 FPGLKSSILFKEVGTP 522
>sp|Q52QW3|CRTS1_ONCHC Prolycopene isomerase 1, chloroplastic OS=Oncidium hybrid cultivar
GN=CRTISO1 PE=2 SV=1
Length = 587
Score = 37.0 bits (84), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 121 IEMVLPSSLDNTLSPPGHHVCLLFTQFTPYKLAG-DRDWTEEDKANYATNVFSSIEQYC- 178
I + +P+ LD +L+P GHH+ +FT + G EE K A + + +E+
Sbjct: 420 IFLSIPTVLDPSLAPEGHHIFHIFTTSSIENWEGLSHKEYEEKKELVADEIITRLEKKLF 479
Query: 179 PGFTQDIVGYEILTP 193
PG +V E+ TP
Sbjct: 480 PGLKDSVVLKEVGTP 494
>sp|Q52QW2|CRTS2_ONCHC Prolycopene isomerase 2, chloroplastic OS=Oncidium hybrid cultivar
GN=CRTISO2 PE=2 SV=1
Length = 587
Score = 37.0 bits (84), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 121 IEMVLPSSLDNTLSPPGHHVCLLFTQFTPYKLAG-DRDWTEEDKANYATNVFSSIEQYC- 178
I + +P+ LD +L+P GHH+ +FT + G EE K A + + +E+
Sbjct: 420 IFLSIPTVLDPSLAPEGHHIFHIFTTSSIENWEGLSHKEYEEKKELVADEIITRLEKKLF 479
Query: 179 PGFTQDIVGYEILTP 193
PG +V E+ TP
Sbjct: 480 PGLKDSVVLKEVGTP 494
>sp|Q2VEX9|CRTSO_DAUCA Prolycopene isomerase, chloroplastic OS=Daucus carota GN=CRTISO
PE=2 SV=1
Length = 615
Score = 36.6 bits (83), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 121 IEMVLPSSLDNTLSPPGHHVCLLFT--QFTPYKLAGDRDWTEEDKANYATNVFSSIEQYC 178
I + +P+ LD++L+P G+H+ +FT ++ +D+ E+ K A + S +E+
Sbjct: 448 IFLSIPTVLDSSLAPEGNHILHIFTTSSIEDWQGMSQKDY-EKKKELVADEIISRLEKKL 506
Query: 179 -PGFTQDIVGYEILTP 193
PG IV E+ TP
Sbjct: 507 FPGLQSSIVLKEVGTP 522
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.141 0.452
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 111,645,663
Number of Sequences: 539616
Number of extensions: 4918920
Number of successful extensions: 8515
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 39
Number of HSP's that attempted gapping in prelim test: 8458
Number of HSP's gapped (non-prelim): 58
length of query: 269
length of database: 191,569,459
effective HSP length: 115
effective length of query: 154
effective length of database: 129,513,619
effective search space: 19945097326
effective search space used: 19945097326
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 60 (27.7 bits)