RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy8953
(286 letters)
>d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance
regulator, CFTR, nucleotide-binding domain {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 281
Score = 62.6 bits (152), Expect = 5e-12
Identities = 12/40 (30%), Positives = 24/40 (60%)
Query: 239 FLNKEILHGISGEFKAGQLTAIMGPSGAGKSTLLNILAGL 278
+ +L I+ + G++ AI G +G+GK++LL ++ G
Sbjct: 46 LVGNPVLKNINLNIEKGEMLAITGSTGSGKTSLLMLILGE 85
Score = 31.4 bits (71), Expect = 0.11
Identities = 12/59 (20%), Positives = 19/59 (32%), Gaps = 2/59 (3%)
Query: 96 GLDSSSCSQCVSLLANLAKQGRTVVATIHTPSALLFEKFDSLYALAKGHCIYRGSISRL 154
LD + Q +T + L K D + L +G + G+ S L
Sbjct: 188 YLDVFTEEQVFESCVCKLMANKTRILVTSKMEHL--RKADKILILHQGSSYFYGTFSEL 244
>d1sgwa_ c.37.1.12 (A:) Putative ABC transporter PF0895 {Pyrococcus
furiosus [TaxId: 2261]}
Length = 200
Score = 60.3 bits (146), Expect = 1e-11
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 241 NKEILHGISGEFKAGQLTAIMGPSGAGKSTLLNILAGL 278
+K +L I+ + G + GP+G GK+TLL ++
Sbjct: 13 DKPVLERITMTIEKGNVVNFHGPNGIGKTTLLKTISTY 50
>d1l7vc_ c.37.1.12 (C:) ABC transporter involved in vitamin B12
uptake, BtuD {Escherichia coli [TaxId: 562]}
Length = 231
Score = 60.7 bits (147), Expect = 1e-11
Identities = 20/42 (47%), Positives = 29/42 (69%)
Query: 238 DFLNKEILHGISGEFKAGQLTAIMGPSGAGKSTLLNILAGLT 279
D L +SGE +AG++ ++GP+GAGKSTLL +AG+T
Sbjct: 8 DVAESTRLGPLSGEVRAGEILHLVGPNGAGKSTLLARMAGMT 49
Score = 36.5 bits (84), Expect = 0.002
Identities = 25/174 (14%), Positives = 47/174 (27%), Gaps = 31/174 (17%)
Query: 11 RLTGSSGKILVNGQERKSACIEQFLKLSCYIQQDDALRPKLTVTEAMMIASHLK------ 64
+T G I GQ ++ + Y+ Q V + + H K
Sbjct: 47 GMTSGKGSIQFAGQPLEAWSATKLALHRAYLSQQQTPPFATPVWHYLTLHQHDKTRTELL 106
Query: 65 ------LGFKVSTQEKKDQVSLE----------LWNNFCKKKKKKK--------RGLDSS 100
L +Q+S + + + LD +
Sbjct: 107 NDVAGALALDDKLGRSTNQLSGGEWQRVRLAAVVLQITPQANPAGQLLLLDEPMNSLDVA 166
Query: 101 SCSQCVSLLANLAKQGRTVVATIHTPSALLFEKFDSLYALAKGHCIYRGSISRL 154
S +L+ L +QG +V + H + + L G + G +
Sbjct: 167 QQSALDKILSALCQQGLAIVMSSHDLN-HTLRHAHRAWLLKGGKMLASGRREEV 219
>d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA,
C-terminal domain {Lactococcus lactis [TaxId: 1358]}
Length = 242
Score = 60.3 bits (146), Expect = 2e-11
Identities = 15/38 (39%), Positives = 23/38 (60%)
Query: 241 NKEILHGISGEFKAGQLTAIMGPSGAGKSTLLNILAGL 278
+++IL IS E + + A GPSG GKST+ ++L
Sbjct: 14 SEQILRDISFEAQPNSIIAFAGPSGGGKSTIFSLLERF 51
>d1b0ua_ c.37.1.12 (A:) ATP-binding subunit of the histidine
permease {Salmonella typhimurium [TaxId: 90371]}
Length = 258
Score = 60.2 bits (146), Expect = 3e-11
Identities = 16/40 (40%), Positives = 26/40 (65%)
Query: 239 FLNKEILHGISGEFKAGQLTAIMGPSGAGKSTLLNILAGL 278
+ E+L G+S + +AG + +I+G SG+GKST L + L
Sbjct: 12 YGGHEVLKGVSLQARAGDVISIIGSSGSGKSTFLRCINFL 51
>d1vpla_ c.37.1.12 (A:) Putative ABC transporter TM0544 {Thermotoga
maritima [TaxId: 2336]}
Length = 238
Score = 59.6 bits (144), Expect = 4e-11
Identities = 19/40 (47%), Positives = 28/40 (70%)
Query: 239 FLNKEILHGISGEFKAGQLTAIMGPSGAGKSTLLNILAGL 278
KEIL GIS E + G++ ++GP+GAGK+T L I++ L
Sbjct: 12 IGKKEILKGISFEIEEGEIFGLIGPNGAGKTTTLRIISTL 51
>d2awna2 c.37.1.12 (A:4-235) Maltose transport protein MalK,
N-terminal domain {Escherichia coli [TaxId: 562]}
Length = 232
Score = 59.2 bits (143), Expect = 4e-11
Identities = 15/40 (37%), Positives = 23/40 (57%)
Query: 239 FLNKEILHGISGEFKAGQLTAIMGPSGAGKSTLLNILAGL 278
+ + I+ + G+ +GPSG GKSTLL ++AGL
Sbjct: 10 WGEVVVSKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGL 49
>d1g6ha_ c.37.1.12 (A:) MJ1267 {Archaeon Methanococcus jannaschii
[TaxId: 2190]}
Length = 254
Score = 59.6 bits (144), Expect = 4e-11
Identities = 17/40 (42%), Positives = 26/40 (65%)
Query: 239 FLNKEILHGISGEFKAGQLTAIMGPSGAGKSTLLNILAGL 278
F + L G+S G +T I+GP+G+GKSTL+N++ G
Sbjct: 14 FGEFKALDGVSISVNKGDVTLIIGPNGSGKSTLINVITGF 53
Score = 36.5 bits (84), Expect = 0.002
Identities = 24/188 (12%), Positives = 51/188 (27%), Gaps = 43/188 (22%)
Query: 15 SSGKILVNGQERKSACIEQFLKLSCYIQ-QDDALRPKLTVTEAMMIASHLK-------LG 66
G++ ++ + + Q ++TV E ++I L
Sbjct: 57 DEGRVYFENKDITNKEPAELYHYGIVRTFQTPQPLKEMTVLENLLIGEICPGESPLNSLF 116
Query: 67 FKVSTQEKKDQVS-----LELWNNFCKKKKKKK--------------------------- 94
+K ++++ V LE +K
Sbjct: 117 YKKWIPKEEEMVEKAFKILEFLKLSHLYDRKAGELSGGQMKLVEIGRALMTNPKMIVMDE 176
Query: 95 --RGLDSSSCSQCVSLLANLAKQGRTVVATIHTPSALLFEKFDSLYALAKGHCIYRGSIS 152
G+ + + L +G T + H ++ D LY + G I G
Sbjct: 177 PIAGVAPGLAHDIFNHVLELKAKGITFLIIEHRLD-IVLNYIDHLYVMFNGQIIAEGRGE 235
Query: 153 RLVPHLAS 160
+ ++ S
Sbjct: 236 EEIKNVLS 243
>d1v43a3 c.37.1.12 (A:7-245) Hypothetical protein PH0022, N-terminal
domain {Pyrococcus horikoshii [TaxId: 53953]}
Length = 239
Score = 58.6 bits (142), Expect = 7e-11
Identities = 15/40 (37%), Positives = 25/40 (62%)
Query: 239 FLNKEILHGISGEFKAGQLTAIMGPSGAGKSTLLNILAGL 278
F N ++ ++ K G+ ++GPSG GK+T L ++AGL
Sbjct: 16 FGNFTAVNKLNLTIKDGEFLVLLGPSGCGKTTTLRMIAGL 55
Score = 32.1 bits (73), Expect = 0.061
Identities = 12/64 (18%), Positives = 24/64 (37%), Gaps = 5/64 (7%)
Query: 15 SSGKILVNGQERKSACIEQFLKLSCYIQQDDALRPKLTVTEAMMIASHLKLGFKVSTQEK 74
+ G+I ++ + + + Q A+ P +TV E + +K K E
Sbjct: 59 TEGRIYFGDRDV--TYLPPKDRNISMVFQSYAVWPHMTVYENIAFPLKIK---KFPKDEI 113
Query: 75 KDQV 78
+V
Sbjct: 114 DKRV 117
>d2hyda1 c.37.1.12 (A:324-578) Putative multidrug export
ATP-binding/permease protein SAV1866 {Staphylococcus
aureus [TaxId: 1280]}
Length = 255
Score = 59.0 bits (143), Expect = 7e-11
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 241 NKEILHGISGEFKAGQLTAIMGPSGAGKSTLLNILAGL 278
IL I+ + G+ A +G SG GKSTL+N++
Sbjct: 30 EAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRF 67
>d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK,
N-terminal domain {Archaeon Thermococcus litoralis
[TaxId: 2265]}
Length = 240
Score = 58.8 bits (142), Expect = 7e-11
Identities = 16/40 (40%), Positives = 24/40 (60%)
Query: 239 FLNKEILHGISGEFKAGQLTAIMGPSGAGKSTLLNILAGL 278
F + +S E K G+ ++GPSG GK+T L ++AGL
Sbjct: 13 FGEVTAVREMSLEVKDGEFMILLGPSGCGKTTTLRMIAGL 52
>d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter
{Thermotoga maritima, TM1139 [TaxId: 2336]}
Length = 240
Score = 58.4 bits (141), Expect = 8e-11
Identities = 14/40 (35%), Positives = 24/40 (60%)
Query: 239 FLNKEILHGISGEFKAGQLTAIMGPSGAGKSTLLNILAGL 278
+ + GI + GQ+ ++G +GAGK+T L+ +AGL
Sbjct: 16 YGAIHAIKGIDLKVPRGQIVTLIGANGAGKTTTLSAIAGL 55
Score = 30.3 bits (68), Expect = 0.22
Identities = 12/60 (20%), Positives = 22/60 (36%), Gaps = 1/60 (1%)
Query: 95 RGLDSSSCSQCVSLLANLAKQGRTVVATIHTPSALLFEKFDSLYALAKGHCIYRGSISRL 154
GL S+ ++ + ++G T++ L + Y L G + G S L
Sbjct: 168 LGLAPILVSEVFEVIQKINQEGTTILLVEQNALGAL-KVAHYGYVLETGQIVLEGKASEL 226
>d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV,
N-terminal domain {Archaeon Sulfolobus solfataricus
[TaxId: 2287]}
Length = 242
Score = 57.8 bits (139), Expect = 2e-10
Identities = 15/38 (39%), Positives = 23/38 (60%)
Query: 241 NKEILHGISGEFKAGQLTAIMGPSGAGKSTLLNILAGL 278
L ++ + G+ I+GPSGAGK+T + I+AGL
Sbjct: 17 KVVALDNVNINIENGERFGILGPSGAGKTTFMRIIAGL 54
>d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC
domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 251
Score = 57.6 bits (139), Expect = 2e-10
Identities = 14/38 (36%), Positives = 27/38 (71%)
Query: 241 NKEILHGISGEFKAGQLTAIMGPSGAGKSTLLNILAGL 278
+ +L G++ + G++TA++GP+G+GKST+ +L L
Sbjct: 26 DVLVLQGLTFTLRPGEVTALVGPNGSGKSTVAALLQNL 63
>d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein
{Escherichia coli [TaxId: 562]}
Length = 241
Score = 57.2 bits (138), Expect = 2e-10
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 241 NKEILHGISGEFKAGQLTAIMGPSGAGKSTLLNILAGL 278
+ IL I+ K G++ I+G SG+GKSTL ++
Sbjct: 15 SPVILDNINLSIKQGEVIGIVGRSGSGKSTLTKLIQRF 52
>d3b60a1 c.37.1.12 (A:329-581) Multidrug resistance ABC transporter
MsbA, C-terminal domain {Salmonella typhimurium [TaxId:
90371]}
Length = 253
Score = 57.5 bits (139), Expect = 2e-10
Identities = 12/38 (31%), Positives = 22/38 (57%)
Query: 241 NKEILHGISGEFKAGQLTAIMGPSGAGKSTLLNILAGL 278
L I+ + AG+ A++G SG+GKST+ +++
Sbjct: 27 EVPALRNINLKIPAGKTVALVGRSGSGKSTIASLITRF 64
>d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter,
ATP-binding protein {Methanosarcina acetivorans [TaxId:
2214]}
Length = 229
Score = 57.0 bits (137), Expect = 2e-10
Identities = 13/34 (38%), Positives = 23/34 (67%)
Query: 245 LHGISGEFKAGQLTAIMGPSGAGKSTLLNILAGL 278
L +S + ++G+ I+GP+GAGK+ L ++AG
Sbjct: 16 LDNLSLKVESGEYFVILGPTGAGKTLFLELIAGF 49
>d1l2ta_ c.37.1.12 (A:) MJ0796 {Archaeon Methanococcus jannaschii
[TaxId: 2190]}
Length = 230
Score = 53.7 bits (129), Expect = 4e-09
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 243 EILHGISGEFKAGQLTAIMGPSGAGKSTLLNILAGL 278
L ++ K G+ +IMGPSG+GKST+LNI+ L
Sbjct: 19 YALKNVNLNIKEGEFVSIMGPSGSGKSTMLNIIGCL 54
>d3dhwc1 c.37.1.12 (C:1-240) Methionine import ATP-binding protein
MetN {Escherichia coli [TaxId: 562]}
Length = 240
Score = 51.8 bits (124), Expect = 1e-08
Identities = 15/36 (41%), Positives = 23/36 (63%)
Query: 243 EILHGISGEFKAGQLTAIMGPSGAGKSTLLNILAGL 278
+ L+ +S AGQ+ ++G SGAGKSTL+ + L
Sbjct: 19 QALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLL 54
Score = 29.9 bits (67), Expect = 0.29
Identities = 16/67 (23%), Positives = 24/67 (35%), Gaps = 6/67 (8%)
Query: 15 SSGKILVNGQERKSACIEQFLKLSCYIQ---QDDALRPKLTVTEAMMIASHLKLGFKVST 71
+ G +LV+GQE + + K I Q L TV + + L
Sbjct: 58 TEGSVLVDGQELTTLSESELTKARRQIGMIFQHFNLLSSRTVFGNVALPLELD---NTPK 114
Query: 72 QEKKDQV 78
E K +V
Sbjct: 115 DEVKRRV 121
>d2onka1 c.37.1.12 (A:1-240) Molybdate/tungstate import ATP-binding
protein WtpC (ModC) {Archaeoglobus fulgidus [TaxId:
2234]}
Length = 240
Score = 48.5 bits (115), Expect = 2e-07
Identities = 10/26 (38%), Positives = 16/26 (61%)
Query: 253 KAGQLTAIMGPSGAGKSTLLNILAGL 278
++GP+GAGKS L ++AG+
Sbjct: 22 MGRDYCVLLGPTGAGKSVFLELIAGI 47
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein
Aq_1292 {Aquifex aeolicus [TaxId: 63363]}
Length = 178
Score = 44.6 bits (104), Expect = 3e-06
Identities = 7/20 (35%), Positives = 10/20 (50%)
Query: 259 AIMGPSGAGKSTLLNILAGL 278
I G G GK+TL+ +
Sbjct: 4 IITGEPGVGKTTLVKKIVER 23
>g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus
[TaxId: 2261]}
Length = 292
Score = 41.3 bits (95), Expect = 6e-05
Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Query: 251 EFKAGQLTAIMGPSGAGKSTLLNILAGLTY 280
EFK G + I+G +G+GKS+LL+ + Y
Sbjct: 20 EFKEG-INLIIGQNGSGKSSLLDAILVGLY 48
Score = 31.3 bits (69), Expect = 0.13
Identities = 6/56 (10%), Positives = 20/56 (35%), Gaps = 2/56 (3%)
Query: 96 GLDSSSCSQCVSLLANLAKQGRTVVATIHTPSALLFEKFDSLYALAKGHCIYRGSI 151
LD + ++++ K+ V+ H + D + ++ + + +
Sbjct: 237 YLDEERRRKLITIMERYLKKIPQVILVSHDEELK--DAADHVIRISLENGSSKVEV 290
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015
{Agrobacterium tumefaciens [TaxId: 358]}
Length = 176
Score = 39.2 bits (90), Expect = 2e-04
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 254 AGQLTAIMGPSGAGKSTLLNILA 276
G + + G G+GKST+ LA
Sbjct: 3 GGNILLLSGHPGSGKSTIAEALA 25
>d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 182
Score = 37.3 bits (85), Expect = 7e-04
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 255 GQLTAIMGPSGAGKSTLLNILA 276
G++ + GPS GKST++ L
Sbjct: 2 GRVVVLSGPSAVGKSTVVRCLR 23
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase
{Streptomyces venezuelae [TaxId: 54571]}
Length = 178
Score = 36.9 bits (84), Expect = 9e-04
Identities = 7/23 (30%), Positives = 12/23 (52%)
Query: 254 AGQLTAIMGPSGAGKSTLLNILA 276
++ + G S AGKS ++ L
Sbjct: 2 TTRMIILNGGSSAGKSGIVRCLQ 24
>d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId:
562]}
Length = 205
Score = 36.7 bits (84), Expect = 0.002
Identities = 11/21 (52%), Positives = 14/21 (66%)
Query: 255 GQLTAIMGPSGAGKSTLLNIL 275
G L + PSGAGKS+L+ L
Sbjct: 2 GTLYIVSAPSGAGKSSLIQAL 22
>d1egaa1 c.37.1.8 (A:4-182) GTPase Era, N-terminal domain
{Escherichia coli [TaxId: 562]}
Length = 179
Score = 35.5 bits (80), Expect = 0.004
Identities = 12/19 (63%), Positives = 13/19 (68%)
Query: 259 AIMGPSGAGKSTLLNILAG 277
AI+G GKSTLLN L G
Sbjct: 9 AIVGRPNVGKSTLLNKLLG 27
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor
beta-subunit {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 209
Score = 35.4 bits (80), Expect = 0.004
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 259 AIMGPSGAGKSTLLNILAG 277
I GP +GK++LL +L
Sbjct: 7 IIAGPQNSGKTSLLTLLTT 25
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus
halodurans [TaxId: 86665]}
Length = 176
Score = 35.0 bits (79), Expect = 0.005
Identities = 11/21 (52%), Positives = 13/21 (61%)
Query: 256 QLTAIMGPSGAGKSTLLNILA 276
+L I GP+G GKST LA
Sbjct: 3 KLYIITGPAGVGKSTTCKRLA 23
>d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and
middle domains {Thermotoga maritima [TaxId: 2336]}
Length = 171
Score = 34.7 bits (78), Expect = 0.006
Identities = 9/19 (47%), Positives = 10/19 (52%)
Query: 259 AIMGPSGAGKSTLLNILAG 277
I+G GKSTL N L
Sbjct: 4 LIVGRPNVGKSTLFNKLVK 22
>d1n0wa_ c.37.1.11 (A:) DNA repair protein Rad51, catalytic domain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 242
Score = 35.2 bits (79), Expect = 0.006
Identities = 8/29 (27%), Positives = 15/29 (51%)
Query: 248 ISGEFKAGQLTAIMGPSGAGKSTLLNILA 276
+ G + G +T + G GK+ + + LA
Sbjct: 16 LQGGIETGSITEMFGEFRTGKTQICHTLA 44
>g1ii8.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus
[TaxId: 2261]}
Length = 369
Score = 35.2 bits (79), Expect = 0.007
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 251 EFKAGQLTAIMGPSGAGKSTLLNILAGLTYLNFS 284
EFK G + I+G +G+GKS+LL+ + Y
Sbjct: 20 EFKEG-INLIIGQNGSGKSSLLDAILVGLYWPLR 52
Score = 31.3 bits (69), Expect = 0.11
Identities = 7/56 (12%), Positives = 21/56 (37%), Gaps = 2/56 (3%)
Query: 96 GLDSSSCSQCVSLLANLAKQGRTVVATIHTPSALLFEKFDSLYALAKGHCIYRGSI 151
LD + ++++ K+ V+ H L + D + ++ + + +
Sbjct: 314 YLDEERRRKLITIMERYLKKIPQVILVSHDEE--LKDAADHVIRISLENGSSKVEV 367
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus
thermophilus [TaxId: 274]}
Length = 178
Score = 34.3 bits (77), Expect = 0.008
Identities = 12/19 (63%), Positives = 13/19 (68%)
Query: 259 AIMGPSGAGKSTLLNILAG 277
AI+G GKSTLLN L G
Sbjct: 9 AIVGKPNVGKSTLLNNLLG 27
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase TrmE
(MnmE), G domain {Escherichia coli [TaxId: 562]}
Length = 161
Score = 34.0 bits (76), Expect = 0.008
Identities = 12/19 (63%), Positives = 13/19 (68%)
Query: 259 AIMGPSGAGKSTLLNILAG 277
I G AGKS+LLN LAG
Sbjct: 5 VIAGRPNAGKSSLLNALAG 23
>d1xzpa2 c.37.1.8 (A:212-371) TrmE GTPase domain {Thermotoga
maritima [TaxId: 2336]}
Length = 160
Score = 33.8 bits (76), Expect = 0.009
Identities = 10/19 (52%), Positives = 11/19 (57%)
Query: 259 AIMGPSGAGKSTLLNILAG 277
I+G GKSTLLN L
Sbjct: 4 VIVGKPNVGKSTLLNRLLN 22
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId:
562]}
Length = 171
Score = 33.9 bits (76), Expect = 0.009
Identities = 8/17 (47%), Positives = 13/17 (76%)
Query: 260 IMGPSGAGKSTLLNILA 276
+MG SG+GKS + + +A
Sbjct: 11 LMGVSGSGKSAVASEVA 27
>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus
horikoshii [TaxId: 53953]}
Length = 184
Score = 33.9 bits (76), Expect = 0.010
Identities = 9/19 (47%), Positives = 10/19 (52%)
Query: 259 AIMGPSGAGKSTLLNILAG 277
G S GKSTL+ L G
Sbjct: 4 IFAGRSNVGKSTLIYRLTG 22
>d1lnza2 c.37.1.8 (A:158-342) Obg GTP-binding protein middle domain
{Bacillus subtilis [TaxId: 1423]}
Length = 185
Score = 34.1 bits (77), Expect = 0.011
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 259 AIMGPSGAGKSTLLNILAG 277
++G GKSTLL++++
Sbjct: 5 GLVGFPSVGKSTLLSVVSS 23
>d1w1wa_ c.37.1.12 (A:) Smc head domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 427
Score = 34.7 bits (78), Expect = 0.012
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 251 EFKAGQLTAIMGPSGAGKSTLL 272
F T+I+GP+G+GKS ++
Sbjct: 21 GFGESNFTSIIGPNGSGKSNMM 42
>d1szpa2 c.37.1.11 (A:145-395) DNA repair protein Rad51, catalytic
domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId:
4932]}
Length = 251
Score = 34.3 bits (77), Expect = 0.012
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 248 ISGEFKAGQLTAIMGPSGAGKSTLLNILA 276
+ G + G +T + G GKS L + LA
Sbjct: 27 LGGGVETGSITELFGEFRTGKSQLCHTLA 55
>d2i1qa2 c.37.1.11 (A:65-322) DNA repair protein Rad51, catalytic
domain {Archaeon Methanococcus voltae [TaxId: 2188]}
Length = 258
Score = 33.9 bits (76), Expect = 0.014
Identities = 6/29 (20%), Positives = 15/29 (51%)
Query: 248 ISGEFKAGQLTAIMGPSGAGKSTLLNILA 276
+ G ++ +T G G+GK+ +++
Sbjct: 27 LGGGLESQSVTEFAGVFGSGKTQIMHQSC 55
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 190
Score = 33.8 bits (76), Expect = 0.015
Identities = 12/17 (70%), Positives = 13/17 (76%)
Query: 260 IMGPSGAGKSTLLNILA 276
+ GPSGAGKSTLL L
Sbjct: 5 LSGPSGAGKSTLLKKLF 21
>d1q3ta_ c.37.1.1 (A:) CMP kinase {Streptococcus pneumoniae [TaxId:
1313]}
Length = 223
Score = 33.4 bits (75), Expect = 0.017
Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 3/27 (11%)
Query: 259 AIMGPSGAGKSTLLNILA---GLTYLN 282
AI GP+ +GKST+ I+A G TYL+
Sbjct: 7 AIDGPASSGKSTVAKIIAKDFGFTYLD 33
>d1tf7a2 c.37.1.11 (A:256-497) Circadian clock protein KaiC
{Synechococcus sp. strain PCC 7942 (Anacystis nidulans
R2) [TaxId: 1140]}
Length = 242
Score = 33.8 bits (76), Expect = 0.017
Identities = 7/29 (24%), Positives = 12/29 (41%)
Query: 248 ISGEFKAGQLTAIMGPSGAGKSTLLNILA 276
G F + G +G GK+ L++
Sbjct: 19 CGGGFFKDSIILATGATGTGKTLLVSRFV 47
>d1udxa2 c.37.1.8 (A:157-336) Obg GTP-binding protein middle domain
{Thermus thermophilus [TaxId: 274]}
Length = 180
Score = 33.5 bits (75), Expect = 0.017
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 259 AIMGPSGAGKSTLLNILAG 277
++G AGKS+LL +
Sbjct: 5 GLVGYPNAGKSSLLAAMTR 23
>d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and
middle domains {Thermotoga maritima [TaxId: 2336]}
Length = 186
Score = 33.1 bits (74), Expect = 0.018
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 259 AIMGPSGAGKSTLLNILAG 277
AI+G GKSTL N +
Sbjct: 12 AIVGRPNVGKSTLFNAILN 30
>g1xew.1 c.37.1.12 (X:,Y:) Smc head domain {Pyrococcus furiosus
[TaxId: 2261]}
Length = 329
Score = 33.8 bits (76), Expect = 0.019
Identities = 10/25 (40%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Query: 248 ISGEFKAGQLTAIMGPSGAGKSTLL 272
+ F G TAI+G +G+GKS +
Sbjct: 20 VVIPFSKG-FTAIVGANGSGKSNIG 43
>d1cr2a_ c.37.1.11 (A:) Gene 4 protein (g4p, DNA primase), helicase
domain {Bacteriophage T7 [TaxId: 10760]}
Length = 277
Score = 33.5 bits (75), Expect = 0.019
Identities = 9/34 (26%), Positives = 15/34 (44%), Gaps = 4/34 (11%)
Query: 243 EILHGISGEFKAGQLTAIMGPSGAGKSTLLNILA 276
+ G + G++ + SG GKST + A
Sbjct: 27 DKTLG----ARGGEVIMVTSGSGMGKSTFVRQQA 56
>d1e69a_ c.37.1.12 (A:) Smc head domain {Thermotoga maritima [TaxId:
2336]}
Length = 308
Score = 33.9 bits (76), Expect = 0.020
Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 251 EFKAGQLTAIMGPSGAGKSTLLNILAGLTYLNFSK 285
F +TAI+GP+G+GKS +++ + + K
Sbjct: 21 GFSDR-VTAIVGPNGSGKSNIIDAIKWVFGEQSKK 54
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 186
Score = 33.0 bits (74), Expect = 0.020
Identities = 12/17 (70%), Positives = 12/17 (70%)
Query: 260 IMGPSGAGKSTLLNILA 276
I GPSG GKSTLL L
Sbjct: 6 ISGPSGTGKSTLLKKLF 22
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34
{Garden pea (Pisum sativum) [TaxId: 3888]}
Length = 257
Score = 33.2 bits (75), Expect = 0.022
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 259 AIMGPSGAGKSTLLNILAG 277
+MG G GKS+ +N + G
Sbjct: 36 LVMGKGGVGKSSTVNSIIG 54
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR,
ribosylnicotinamide kinase domain {Haemophilus
influenzae [TaxId: 727]}
Length = 192
Score = 33.1 bits (74), Expect = 0.023
Identities = 10/18 (55%), Positives = 13/18 (72%)
Query: 259 AIMGPSGAGKSTLLNILA 276
AI+G +GKS L+N LA
Sbjct: 11 AILGGESSGKSVLVNKLA 28
>d1f5na2 c.37.1.8 (A:7-283) Interferon-induced guanylate-binding
protein 1 (GBP1), N-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 277
Score = 33.5 bits (76), Expect = 0.024
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
Query: 243 EILHGISGEFKAGQLTAIMGPSGAGKSTLLNILAGL 278
+IL I+ + AI+G GKS L+N LAG
Sbjct: 23 KILSAITQPMV---VVAIVGLYRTGKSYLMNKLAGK 55
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955
{Pyrococcus abyssi [TaxId: 29292]}
Length = 244
Score = 33.0 bits (74), Expect = 0.026
Identities = 6/18 (33%), Positives = 10/18 (55%)
Query: 258 TAIMGPSGAGKSTLLNIL 275
+G +G+GK+TL
Sbjct: 3 VVFVGTAGSGKTTLTGEF 20
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 198
Score = 32.8 bits (73), Expect = 0.026
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 259 AIMGPSGAGKSTLLNILA 276
I G S +GK+TL N L+
Sbjct: 26 GIDGLSRSGKTTLANQLS 43
>d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis
[TaxId: 1423]}
Length = 195
Score = 32.8 bits (73), Expect = 0.027
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 259 AIMGPSGAGKSTLLNILAG 277
A+ G S GKS+ +N L
Sbjct: 27 ALAGRSNVGKSSFINSLIN 45
>d1ckea_ c.37.1.1 (A:) CMP kinase {Escherichia coli [TaxId: 562]}
Length = 225
Score = 33.1 bits (74), Expect = 0.027
Identities = 12/27 (44%), Positives = 14/27 (51%), Gaps = 3/27 (11%)
Query: 259 AIMGPSGAGKSTLLNILA---GLTYLN 282
I GPSGAGK TL +A L+
Sbjct: 7 TIDGPSGAGKGTLCKAMAEALQWHLLD 33
>d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 400
Score = 33.2 bits (75), Expect = 0.028
Identities = 9/21 (42%), Positives = 15/21 (71%)
Query: 259 AIMGPSGAGKSTLLNILAGLT 279
A+ G +G+GKS+ +N L G+
Sbjct: 60 AVTGETGSGKSSFINTLRGIG 80
>d1puia_ c.37.1.8 (A:) Probable GTPase EngB {Escherichia coli
[TaxId: 562]}
Length = 188
Score = 32.8 bits (73), Expect = 0.029
Identities = 10/19 (52%), Positives = 11/19 (57%)
Query: 259 AIMGPSGAGKSTLLNILAG 277
A G S AGKS+ LN L
Sbjct: 20 AFAGRSNAGKSSALNTLTN 38
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide
biosynthesis protein MobB {Escherichia coli [TaxId:
562]}
Length = 170
Score = 32.6 bits (73), Expect = 0.030
Identities = 9/19 (47%), Positives = 10/19 (52%)
Query: 258 TAIMGPSGAGKSTLLNILA 276
A SG GK+TLL L
Sbjct: 5 LAFAAWSGTGKTTLLKKLI 23
>d1nlfa_ c.37.1.11 (A:) Hexameric replicative helicase repA
{Escherichia coli [TaxId: 562]}
Length = 274
Score = 33.1 bits (74), Expect = 0.032
Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 5/50 (10%)
Query: 232 AYHNPADFLNK-----EILHGISGEFKAGQLTAIMGPSGAGKSTLLNILA 276
A H P + L L + AG + A++ P GAGKS L LA
Sbjct: 1 ATHKPINILEAFAAAPPPLDYVLPNMVAGTVGALVSPGGAGKSMLALQLA 50
>d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human
(Homo sapiens) [TaxId: 9606]}
Length = 178
Score = 32.5 bits (73), Expect = 0.034
Identities = 5/20 (25%), Positives = 9/20 (45%)
Query: 257 LTAIMGPSGAGKSTLLNILA 276
++G G G+ + N L
Sbjct: 5 TLVLLGAHGVGRRHIKNTLI 24
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major
[TaxId: 5664]}
Length = 174
Score = 32.3 bits (72), Expect = 0.035
Identities = 6/18 (33%), Positives = 11/18 (61%)
Query: 259 AIMGPSGAGKSTLLNILA 276
I G G GK+++ ++A
Sbjct: 9 LITGTPGTGKTSMAEMIA 26
>d1tf7a1 c.37.1.11 (A:14-255) Circadian clock protein KaiC
{Synechococcus sp. strain PCC 7942 (Anacystis nidulans
R2) [TaxId: 1140]}
Length = 242
Score = 32.7 bits (73), Expect = 0.041
Identities = 9/30 (30%), Positives = 13/30 (43%), Gaps = 1/30 (3%)
Query: 248 ISGEFKAGQLTAIMGPSGAGKSTL-LNILA 276
G G+ T + G SG GK+ + L
Sbjct: 19 SHGGLPIGRSTLVSGTSGTGKTLFSIQFLY 48
>d1pzna2 c.37.1.11 (A:96-349) DNA repair protein Rad51, catalytic
domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Length = 254
Score = 32.4 bits (72), Expect = 0.043
Identities = 10/39 (25%), Positives = 19/39 (48%)
Query: 248 ISGEFKAGQLTAIMGPSGAGKSTLLNILAGLTYLNFSKC 286
+ G + +T + G G+GK+ L + LA + L +
Sbjct: 29 LGGGIETQAITEVFGEFGSGKTQLAHTLAVMVQLPPEEG 67
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli
[TaxId: 562]}
Length = 169
Score = 31.6 bits (70), Expect = 0.053
Identities = 10/17 (58%), Positives = 13/17 (76%)
Query: 260 IMGPSGAGKSTLLNILA 276
++GP GAGKST+ LA
Sbjct: 7 LVGPMGAGKSTIGRQLA 23
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus
voltae [TaxId: 2188]}
Length = 190
Score = 31.5 bits (70), Expect = 0.064
Identities = 4/21 (19%), Positives = 9/21 (42%)
Query: 256 QLTAIMGPSGAGKSTLLNILA 276
++ + G G G +T +
Sbjct: 2 KVVVVTGVPGVGSTTSSQLAM 22
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta,
toxin zeta subunit {Streptococcus pyogenes [TaxId:
1314]}
Length = 273
Score = 31.9 bits (71), Expect = 0.072
Identities = 13/48 (27%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Query: 238 DFLNKEILHGISGEFKAGQLTAIM--GPSGAGKSTLLNILAGLTYLNF 283
+ LN + I G+ TA + G G+GK++L + + T N
Sbjct: 13 NRLNDNLEELIQGKKAVESPTAFLLGGQPGSGKTSLRSAIFEETQGNV 60
>d2p67a1 c.37.1.10 (A:1-327) LAO/AO transport system kinase ArgK
{Escherichia coli [TaxId: 562]}
Length = 327
Score = 32.1 bits (72), Expect = 0.072
Identities = 19/87 (21%), Positives = 32/87 (36%), Gaps = 10/87 (11%)
Query: 200 DSLYALAKGHCIYRGSISRLVPHLASLGLPCPAYHNPADFLNKEILHGISGEFKAGQLTA 259
+S+ L +G R ++++ + + S H L+ ++L I
Sbjct: 9 ESIRRLRQGE---RATLAQAMTLVES-------RHPRHQALSTQLLDAIMPYCGNTLRLG 58
Query: 260 IMGPSGAGKSTLLNILAGLTYLNFSKC 286
+ G GAGKST L L K
Sbjct: 59 VTGTPGAGKSTFLEAFGMLLIREGLKV 85
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain
{Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Length = 183
Score = 31.6 bits (70), Expect = 0.074
Identities = 4/17 (23%), Positives = 7/17 (41%)
Query: 260 IMGPSGAGKSTLLNILA 276
+ G +GK + L
Sbjct: 11 LTGYMNSGKDAIARALQ 27
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens),
isoenzyme 6 [TaxId: 9606]}
Length = 173
Score = 31.5 bits (70), Expect = 0.074
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 260 IMGPSGAGKSTLLNILA 276
+ G G GK+TL LA
Sbjct: 9 LTGTPGVGKTTLGKELA 25
>d1qhla_ c.37.1.12 (A:) Cell division protein MukB {Escherichia coli
[TaxId: 562]}
Length = 222
Score = 31.5 bits (70), Expect = 0.084
Identities = 8/25 (32%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
Query: 251 EFKAGQLTAIMGPSGAGKSTLLNIL 275
+ +T + G +GAGKST +
Sbjct: 21 DLDEL-VTTLSGGNGAGKSTTMAAF 44
>d1kkma_ c.91.1.2 (A:) HPr kinase HprK C-terminal domain
{Lactobacillus casei [TaxId: 1582]}
Length = 176
Score = 31.0 bits (70), Expect = 0.086
Identities = 11/34 (32%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 242 KEILHGISGEFKAGQLTAIMGPSGAGKSTLLNIL 275
+ +HG+ + G I G SG GKS L
Sbjct: 2 RRSMHGVLVDIY-GLGVLITGDSGVGKSETALEL 34
>d2vp4a1 c.37.1.1 (A:12-208) Deoxyribonucleoside kinase {Fruit fly
(Drosophila melanogaster) [TaxId: 7227]}
Length = 197
Score = 31.1 bits (69), Expect = 0.097
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 259 AIMGPSGAGKSTLLNILA 276
I G G+GK+T LN
Sbjct: 13 LIEGNIGSGKTTYLNHFE 30
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor
beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Length = 207
Score = 31.1 bits (69), Expect = 0.098
Identities = 5/19 (26%), Positives = 8/19 (42%)
Query: 259 AIMGPSGAGKSTLLNILAG 277
+G +GK+ L L
Sbjct: 4 LFVGLCDSGKTLLFVRLLT 22
>d1nn5a_ c.37.1.1 (A:) Thymidylate kinase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 209
Score = 31.1 bits (69), Expect = 0.098
Identities = 9/24 (37%), Positives = 11/24 (45%)
Query: 253 KAGQLTAIMGPSGAGKSTLLNILA 276
+ G L + G AGKST L
Sbjct: 1 RRGALIVLEGVDRAGKSTQSRKLV 24
>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide
biosynthesis protein MobB {Bacillus stearothermophilus
[TaxId: 1422]}
Length = 165
Score = 31.0 bits (69), Expect = 0.10
Identities = 5/17 (29%), Positives = 10/17 (58%)
Query: 260 IMGPSGAGKSTLLNILA 276
++G +GK+TL+
Sbjct: 6 VVGYKHSGKTTLMEKWV 22
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus
acidocaldarius [TaxId: 2285]}
Length = 194
Score = 31.1 bits (69), Expect = 0.11
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 260 IMGPSGAGKSTLLNILA 276
+ G G GKST+L +
Sbjct: 6 VTGIPGVGKSTVLAKVK 22
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus
solfataricus [TaxId: 2287]}
Length = 283
Score = 31.2 bits (69), Expect = 0.11
Identities = 6/22 (27%), Positives = 12/22 (54%)
Query: 255 GQLTAIMGPSGAGKSTLLNILA 276
+T ++G GKS+++ I
Sbjct: 29 APITLVLGLRRTGKSSIIKIGI 50
>d2qm8a1 c.37.1.10 (A:5-327) Metallochaperone MeaB {Methylobacterium
extorquens [TaxId: 408]}
Length = 323
Score = 31.4 bits (70), Expect = 0.11
Identities = 11/64 (17%), Positives = 23/64 (35%), Gaps = 7/64 (10%)
Query: 213 RGSISRLVPHLASLGLPCPAYHNPADFLNKEILHGISGEFKAGQLTAIMGPSGAGKSTLL 272
R +++R + S ++++ + + I G G GKST +
Sbjct: 16 RAALARAITLAES-------RRADHRAAVRDLIDAVLPQTGRAIRVGITGVPGVGKSTTI 68
Query: 273 NILA 276
+ L
Sbjct: 69 DALG 72
>d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 213
Score = 31.1 bits (69), Expect = 0.11
Identities = 4/18 (22%), Positives = 10/18 (55%)
Query: 259 AIMGPSGAGKSTLLNILA 276
+ G + +GKS++ +
Sbjct: 6 GVSGGTASGKSSVCAKIV 23
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL2 [TaxId: 10090]}
Length = 165
Score = 30.8 bits (68), Expect = 0.11
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 259 AIMGPSGAGKSTLLNILAG 277
++G AGK+T+L G
Sbjct: 6 LMLGLDNAGKTTILKKFNG 24
>d2akab1 c.37.1.8 (B:6-304) Dynamin G domain {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 299
Score = 31.4 bits (70), Expect = 0.12
Identities = 11/35 (31%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 247 GISGEFKAGQLTAIMGPSGAGKSTLLNILAGLTYL 281
G + + Q+ A++G AGKS++L G +L
Sbjct: 19 GQNADLDLPQI-AVVGGQSAGKSSVLENFVGRDFL 52
>d1knxa2 c.91.1.2 (A:133-309) HPr kinase HprK C-terminal domain
{Mycoplasma pneumoniae [TaxId: 2104]}
Length = 177
Score = 30.7 bits (69), Expect = 0.12
Identities = 11/40 (27%), Positives = 16/40 (40%), Gaps = 3/40 (7%)
Query: 245 LHGISGEFKAGQLTAIMGPSGAGKSTLLNIL--AGLTYLN 282
+HG+ E G + G SG GKS L ++
Sbjct: 6 IHGVLLEVF-GVGVLLTGRSGIGKSECALDLINKNHLFVG 44
>d1v5wa_ c.37.1.11 (A:) Meiotic recombination protein DMC1/LIM15
homolog {Human (Homo sapiens) [TaxId: 9606]}
Length = 258
Score = 31.2 bits (69), Expect = 0.12
Identities = 6/25 (24%), Positives = 11/25 (44%)
Query: 248 ISGEFKAGQLTAIMGPSGAGKSTLL 272
+ G ++ +T G GK+ L
Sbjct: 30 LGGGIESMAITEAFGEFRTGKTQLS 54
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni
[TaxId: 197]}
Length = 161
Score = 30.7 bits (68), Expect = 0.12
Identities = 11/25 (44%), Positives = 13/25 (52%)
Query: 259 AIMGPSGAGKSTLLNILAGLTYLNF 283
+G G+GKSTL LA L F
Sbjct: 4 VFIGFMGSGKSTLARALAKDLDLVF 28
>d1wb1a4 c.37.1.8 (A:1-179) Elongation factor SelB, N-terminal
domain {Methanococcus maripaludis [TaxId: 39152]}
Length = 179
Score = 30.8 bits (68), Expect = 0.13
Identities = 7/21 (33%), Positives = 10/21 (47%)
Query: 259 AIMGPSGAGKSTLLNILAGLT 279
I G GK+TL +L +
Sbjct: 9 GIFGHIDHGKTTLSKVLTEIA 29
>d1m7xa3 c.1.8.1 (A:227-622) 1,4-alpha-glucan branching enzyme,
central domain {Escherichia coli [TaxId: 562]}
Length = 396
Score = 31.1 bits (69), Expect = 0.14
Identities = 10/56 (17%), Positives = 15/56 (26%), Gaps = 13/56 (23%)
Query: 212 YRGSISRLVPHLASLGL-----------PCPAYH--NPADFLNKEILHGISGEFKA 254
YR +LVP+ +G P P G +F+
Sbjct: 39 YRELADQLVPYAKWMGFTHLELLPINEHPFDGSWGYQPTGLYAPTRRFGTRDDFRY 94
Score = 29.2 bits (64), Expect = 0.55
Identities = 6/16 (37%), Positives = 9/16 (56%)
Query: 147 YRGSISRLVPHLASLG 162
YR +LVP+ +G
Sbjct: 39 YRELADQLVPYAKWMG 54
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARL1 [TaxId: 9606]}
Length = 169
Score = 30.4 bits (67), Expect = 0.14
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 259 AIMGPSGAGKSTLLNILAG 277
I+G GAGK+T+L L
Sbjct: 9 LILGLDGAGKTTILYRLQV 27
>d1g41a_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Length = 443
Score = 31.3 bits (70), Expect = 0.14
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 260 IMGPSGAGKSTLLNILAGLTYLNFSKC 286
++GP+G GK+ + LA L F K
Sbjct: 54 MIGPTGVGKTEIARRLAKLANAPFIKV 80
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo
sapiens), ARL8A [TaxId: 9606]}
Length = 164
Score = 30.4 bits (67), Expect = 0.14
Identities = 6/19 (31%), Positives = 13/19 (68%)
Query: 259 AIMGPSGAGKSTLLNILAG 277
++G +GK+T +N++A
Sbjct: 6 TLVGLQYSGKTTFVNVIAS 24
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS
kinase) {Human (Homo sapiens) [TaxId: 9606]}
Length = 195
Score = 30.8 bits (68), Expect = 0.14
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 260 IMGPSGAGKSTLLNILAGLTYLNFSKC 286
+ G SGAGK+T+ L + C
Sbjct: 24 LTGLSGAGKTTVSMALEEYLVCHGIPC 50
>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi
[TaxId: 556]}
Length = 170
Score = 30.3 bits (67), Expect = 0.15
Identities = 7/24 (29%), Positives = 11/24 (45%)
Query: 260 IMGPSGAGKSTLLNILAGLTYLNF 283
++G G G +T+ LA F
Sbjct: 7 MVGARGCGMTTVGRELARALGYEF 30
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain
{Bacteriophage T4 [TaxId: 10665]}
Length = 152
Score = 30.1 bits (66), Expect = 0.16
Identities = 6/21 (28%), Positives = 10/21 (47%)
Query: 256 QLTAIMGPSGAGKSTLLNILA 276
++ +G G+GKST
Sbjct: 3 KIILTIGCPGSGKSTWAREFI 23
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 166
Score = 30.0 bits (66), Expect = 0.18
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 260 IMGPSGAGKSTLLNILAG 277
+G AGK+TLL++L
Sbjct: 5 FLGLDNAGKTTLLHMLKN 22
>d1p5zb_ c.37.1.1 (B:) Deoxycytidine kinase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 241
Score = 30.4 bits (67), Expect = 0.18
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 255 GQLTAIMGPSGAGKSTLLNILA 276
+ +I G AGKST +NIL
Sbjct: 2 IKKISIEGNIAAGKSTFVNILK 23
>d1a7ja_ c.37.1.6 (A:) Phosphoribulokinase {Rhodobacter sphaeroides
[TaxId: 1063]}
Length = 288
Score = 30.7 bits (69), Expect = 0.19
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 259 AIMGPSGAGKSTLLNILA 276
++ G SGAG ST+ +
Sbjct: 8 SVTGSSGAGTSTVKHTFD 25
>d1e2ka_ c.37.1.1 (A:) Thymidine kinase {Herpes simplex virus type
1, different strains [TaxId: 10298]}
Length = 329
Score = 30.7 bits (69), Expect = 0.19
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 259 AIMGPSGAGKSTLLNILA 276
I GP G GK+T +L
Sbjct: 8 YIDGPHGMGKTTTTQLLV 25
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 165
Score = 30.0 bits (66), Expect = 0.20
Identities = 8/25 (32%), Positives = 13/25 (52%)
Query: 259 AIMGPSGAGKSTLLNILAGLTYLNF 283
++G G+GKST+ LA +
Sbjct: 5 VLVGLPGSGKSTIGRRLAKALGVGL 29
>d1e9ra_ c.37.1.11 (A:) Bacterial conjugative coupling protein TrwB
{Escherichia coli [TaxId: 562]}
Length = 433
Score = 30.7 bits (68), Expect = 0.21
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 258 TAIMGPSGAGKSTLLNILA 276
+ G +G GKS LL LA
Sbjct: 53 LLVNGATGTGKSVLLRELA 71
>d1tmka_ c.37.1.1 (A:) Thymidylate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 214
Score = 29.9 bits (66), Expect = 0.24
Identities = 10/22 (45%), Positives = 12/22 (54%)
Query: 255 GQLTAIMGPSGAGKSTLLNILA 276
G+L I G GK+T NIL
Sbjct: 3 GKLILIEGLDRTGKTTQCNILY 24
>d2olra1 c.91.1.1 (A:228-540) Phosphoenolpyruvate (PEP)
carboxykinase (ATP-oxaloacetate carboxy-lyase)
{Escherichia coli [TaxId: 562]}
Length = 313
Score = 30.0 bits (67), Expect = 0.26
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 245 LHGISGEFKAGQLTAIMGPSGAGKSTL 271
+H + + G + G SG GK+TL
Sbjct: 4 MHCSANVGEKGDVAVFFGLSGTGKTTL 30
>d1ko7a2 c.91.1.2 (A:130-298) HPr kinase HprK C-terminal domain
{Staphylococcus xylosus [TaxId: 1288]}
Length = 169
Score = 29.5 bits (66), Expect = 0.26
Identities = 9/21 (42%), Positives = 9/21 (42%)
Query: 255 GQLTAIMGPSGAGKSTLLNIL 275
G I G SG GKS L
Sbjct: 15 GVGVLITGDSGIGKSETALEL 35
>d1p6xa_ c.37.1.1 (A:) Thymidine kinase {Equine herpesvirus type 4
[TaxId: 10331]}
Length = 333
Score = 30.0 bits (67), Expect = 0.27
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 259 AIMGPSGAGKSTLLNILA 276
+ G G GKST ++A
Sbjct: 10 YLDGVYGIGKSTTGRVMA 27
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL3 [TaxId: 10090]}
Length = 176
Score = 29.5 bits (65), Expect = 0.28
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 259 AIMGPSGAGKSTLLNILAG 277
++G AGK+TLL LA
Sbjct: 20 LLLGLDNAGKTTLLKQLAS 38
>d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens) [TaxId:
9606]}
Length = 194
Score = 29.6 bits (65), Expect = 0.31
Identities = 9/27 (33%), Positives = 14/27 (51%), Gaps = 3/27 (11%)
Query: 260 IMGPSGAGKSTLLNILA---GLTYLNF 283
++G GAGK T + G T+L+
Sbjct: 6 VLGGPGAGKGTQCARIVEKYGYTHLSA 32
>d1osna_ c.37.1.1 (A:) Thymidine kinase {Varicella-zoster virus
[TaxId: 10335]}
Length = 331
Score = 30.0 bits (67), Expect = 0.32
Identities = 5/18 (27%), Positives = 7/18 (38%)
Query: 259 AIMGPSGAGKSTLLNILA 276
+ G G GK+T
Sbjct: 9 YLDGAYGIGKTTAAEEFL 26
>d1gsia_ c.37.1.1 (A:) Thymidylate kinase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 208
Score = 29.6 bits (65), Expect = 0.33
Identities = 10/18 (55%), Positives = 12/18 (66%)
Query: 259 AIMGPSGAGKSTLLNILA 276
AI G GAGK TL+ L+
Sbjct: 4 AIEGVDGAGKRTLVEKLS 21
>d1xbta1 c.37.1.24 (A:18-150) Thymidine kinase, TK1, N-terminal
domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 133
Score = 28.9 bits (64), Expect = 0.33
Identities = 10/18 (55%), Positives = 13/18 (72%)
Query: 255 GQLTAIMGPSGAGKSTLL 272
GQ+ I+GP +GKST L
Sbjct: 2 GQIQVILGPMFSGKSTEL 19
>d2ocpa1 c.37.1.1 (A:37-277) Deoxyguanosine kinase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 241
Score = 29.6 bits (65), Expect = 0.33
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 259 AIMGPSGAGKSTLLNILA 276
+I G GKST + +L
Sbjct: 6 SIEGNIAVGKSTFVKLLT 23
>d1jwyb_ c.37.1.8 (B:) Dynamin G domain {Dictyostelium discoideum
[TaxId: 44689]}
Length = 306
Score = 29.8 bits (66), Expect = 0.34
Identities = 7/23 (30%), Positives = 14/23 (60%)
Query: 259 AIMGPSGAGKSTLLNILAGLTYL 281
++G +GKS++L + G +L
Sbjct: 28 VVVGSQSSGKSSVLENIVGRDFL 50
>d1g8pa_ c.37.1.20 (A:) ATPase subunit of magnesium chelatase, BchI
{Rhodobacter capsulatus [TaxId: 1061]}
Length = 333
Score = 29.9 bits (66), Expect = 0.35
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 260 IMGPSGAGKSTLLNILAGL 278
+ G G GKST + LA L
Sbjct: 33 VFGDRGTGKSTAVRALAAL 51
>d1ii2a1 c.91.1.1 (A:201-523) Phosphoenolpyruvate (PEP)
carboxykinase (ATP-oxaloacetate carboxy-lyase)
{Trypanosoma cruzi [TaxId: 5693]}
Length = 323
Score = 29.5 bits (66), Expect = 0.37
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 245 LHGISGEFKAGQLTAIMGPSGAGKSTL 271
+H + K G +T G SG GK+TL
Sbjct: 4 MHASANVGKQGDVTVFFGLSGTGKTTL 30
>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 189
Score = 29.2 bits (64), Expect = 0.39
Identities = 7/17 (41%), Positives = 12/17 (70%)
Query: 260 IMGPSGAGKSTLLNILA 276
+ GP G GK+TL++ +
Sbjct: 6 LTGPPGVGKTTLIHKAS 22
>d2b8ta1 c.37.1.24 (A:11-149) Thymidine kinase, TK1, N-terminal
domain {Ureaplasma urealyticum [TaxId: 2130]}
Length = 139
Score = 28.9 bits (64), Expect = 0.39
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 255 GQLTAIMGPSGAGKSTLL 272
G + I GP AGK+ L
Sbjct: 2 GWIEFITGPMFAGKTAEL 19
>d4tmka_ c.37.1.1 (A:) Thymidylate kinase {Escherichia coli [TaxId:
562]}
Length = 210
Score = 29.5 bits (65), Expect = 0.40
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 255 GQLTAIMGPSGAGKSTLLNILA 276
+ I G GAGK+T N++
Sbjct: 2 SKYIVIEGLEGAGKTTARNVVV 23
>d1j3ba1 c.91.1.1 (A:212-529) Phosphoenolpyruvate (PEP)
carboxykinase (ATP-oxaloacetate carboxy-lyase) {Thermus
thermophilus [TaxId: 274]}
Length = 318
Score = 29.6 bits (66), Expect = 0.45
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 245 LHGISGEFKAGQLTAIMGPSGAGKSTL 271
+H + K G + G SG GK+TL
Sbjct: 4 MHASANVGKEGDVAVFFGLSGTGKTTL 30
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum
[TaxId: 44689]}
Length = 194
Score = 29.2 bits (64), Expect = 0.47
Identities = 7/27 (25%), Positives = 13/27 (48%), Gaps = 3/27 (11%)
Query: 260 IMGPSGAGKSTLLNILA---GLTYLNF 283
++G G+GK T + G +L+
Sbjct: 11 VLGGPGSGKGTQCANIVRDFGWVHLSA 37
>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3'
phosphatase, C-terminal domain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 172
Score = 28.7 bits (63), Expect = 0.49
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 256 QLTAIMGPSGAGKSTLLNILA 276
++ +G GAGKST +
Sbjct: 15 EVVVAVGFPGAGKSTFIQEHL 35
>d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 182
Score = 28.7 bits (63), Expect = 0.50
Identities = 7/17 (41%), Positives = 9/17 (52%)
Query: 260 IMGPSGAGKSTLLNILA 276
+MG GAGK T +
Sbjct: 5 LMGLPGAGKGTQAEKIV 21
>d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase {Escherichia
coli [TaxId: 562]}
Length = 179
Score = 28.7 bits (63), Expect = 0.52
Identities = 5/17 (29%), Positives = 8/17 (47%)
Query: 260 IMGPSGAGKSTLLNILA 276
++G AGK T +
Sbjct: 5 LLGAPVAGKGTQAQFIM 21
>d2cdna1 c.37.1.1 (A:1-181) Adenylate kinase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 181
Score = 28.7 bits (63), Expect = 0.53
Identities = 9/17 (52%), Positives = 11/17 (64%)
Query: 260 IMGPSGAGKSTLLNILA 276
++GP GAGK T LA
Sbjct: 5 LLGPPGAGKGTQAVKLA 21
>d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos
taurus), mitochondrial izozyme-2 [TaxId: 9913]}
Length = 190
Score = 28.8 bits (63), Expect = 0.54
Identities = 10/27 (37%), Positives = 14/27 (51%), Gaps = 3/27 (11%)
Query: 260 IMGPSGAGKSTLLNILA---GLTYLNF 283
++GP GAGK T LA + +L
Sbjct: 8 LLGPPGAGKGTQAPKLAKNFCVCHLAT 34
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF1 [TaxId: 9606]}
Length = 160
Score = 28.5 bits (62), Expect = 0.57
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 260 IMGPSGAGKSTLLNILAG 277
++G AGK+T+L L
Sbjct: 5 MVGLDAAGKTTILYKLKL 22
>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea
mays) [TaxId: 4577]}
Length = 189
Score = 28.7 bits (63), Expect = 0.60
Identities = 5/17 (29%), Positives = 8/17 (47%)
Query: 260 IMGPSGAGKSTLLNILA 276
I G +GK T ++
Sbjct: 8 ISGAPASGKGTQCELIK 24
>d3adka_ c.37.1.1 (A:) Adenylate kinase {Pig (Sus scrofa) [TaxId:
9823]}
Length = 194
Score = 28.8 bits (63), Expect = 0.60
Identities = 8/30 (26%), Positives = 14/30 (46%), Gaps = 3/30 (10%)
Query: 260 IMGPSGAGKSTLLNILA---GLTYLNFSKC 286
++G G+GK T + G T+L+
Sbjct: 13 VVGGPGSGKGTQCEKIVQKYGYTHLSTGDL 42
>d1akya1 c.37.1.1 (A:3-130,A:169-220) Adenylate kinase {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 180
Score = 28.8 bits (63), Expect = 0.61
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 260 IMGPSGAGKSTLLNILA 276
++GP GAGK T L
Sbjct: 7 LIGPPGAGKGTQAPNLQ 23
>d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos
taurus), mitochondrial izozyme-3 [TaxId: 9913]}
Length = 189
Score = 28.6 bits (63), Expect = 0.63
Identities = 10/28 (35%), Positives = 16/28 (57%), Gaps = 3/28 (10%)
Query: 259 AIMGPSGAGKSTLLNILA---GLTYLNF 283
AIMG G+GK T+ + + L +L+
Sbjct: 10 AIMGAPGSGKGTVSSRITKHFELKHLSS 37
>d1xx6a1 c.37.1.24 (A:2-142) Thymidine kinase, TK1, N-terminal
domain {Clostridium acetobutylicum [TaxId: 1488]}
Length = 141
Score = 28.1 bits (62), Expect = 0.66
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 255 GQLTAIMGPSGAGKSTLL 272
G + I+GP +GKS L
Sbjct: 7 GWVEVIVGPMYSGKSEEL 24
>d1u0la2 c.37.1.8 (A:69-293) Probable GTPase EngC (YjeQ), C-terminal
domain {Thermotoga maritima [TaxId: 2336]}
Length = 225
Score = 28.5 bits (63), Expect = 0.72
Identities = 12/45 (26%), Positives = 19/45 (42%)
Query: 229 PCPAYHNPADFLNKEILHGISGEFKAGQLTAIMGPSGAGKSTLLN 273
Y + E+ G+++ + G SG GKS+LLN
Sbjct: 69 YSGLYPIVKTSAKTGMGIEELKEYLKGKISTMAGLSGVGKSSLLN 113
>d1s3ga1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus
globisporus [TaxId: 1459]}
Length = 182
Score = 28.3 bits (62), Expect = 0.73
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 260 IMGPSGAGKSTLLNILA 276
+MG GAGK T + +
Sbjct: 5 LMGLPGAGKGTQADRIV 21
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId:
9606]}
Length = 168
Score = 28.2 bits (61), Expect = 0.77
Identities = 8/26 (30%), Positives = 12/26 (46%)
Query: 259 AIMGPSGAGKSTLLNILAGLTYLNFS 284
++G G GKS L I G+ +
Sbjct: 5 LLLGAPGVGKSALARIFGGVEDGPEA 30
>d1odfa_ c.37.1.6 (A:) Hypothetical protein Ygr205W {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 286
Score = 28.6 bits (63), Expect = 0.77
Identities = 11/39 (28%), Positives = 15/39 (38%)
Query: 238 DFLNKEILHGISGEFKAGQLTAIMGPSGAGKSTLLNILA 276
+FL+K I K GP G+GKS +
Sbjct: 10 EFLDKYIPEWFETGNKCPLFIFFSGPQGSGKSFTSIQIY 48
>d1g7sa4 c.37.1.8 (A:1-227) Initiation factor IF2/eIF5b, N-terminal
(G) domain {Archaeon Methanobacterium
thermoautotrophicum [TaxId: 145262]}
Length = 227
Score = 28.5 bits (62), Expect = 0.82
Identities = 7/21 (33%), Positives = 13/21 (61%)
Query: 259 AIMGPSGAGKSTLLNILAGLT 279
+++G GK+TLL+ + G
Sbjct: 9 SVLGHVDHGKTTLLDHIRGSA 29
>d2bmfa2 c.37.1.14 (A:178-482) Dengue virus helicase {Dengue virus
type 2 [TaxId: 11060]}
Length = 305
Score = 28.7 bits (63), Expect = 0.85
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 252 FKAGQLTAIMGPSGAGKST 270
F+ +LT + GAGK+
Sbjct: 6 FRKKRLTIMDLHPGAGKTK 24
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus)
[TaxId: 10029]}
Length = 186
Score = 28.1 bits (61), Expect = 0.89
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 260 IMGPSGAGKSTLLNILAG 277
+G AGK+TLL++L
Sbjct: 18 FLGLDNAGKTTLLHMLKD 35
>d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 196
Score = 28.0 bits (61), Expect = 0.90
Identities = 8/27 (29%), Positives = 12/27 (44%), Gaps = 3/27 (11%)
Query: 260 IMGPSGAGKSTLLNILA---GLTYLNF 283
++G GAGK T L +L+
Sbjct: 13 VLGGPGAGKGTQCEKLVKDYSFVHLSA 39
>d1nija1 c.37.1.10 (A:2-223) Hypothetical protein YjiA, N-terminal
domain {Escherichia coli [TaxId: 562]}
Length = 222
Score = 28.3 bits (62), Expect = 0.93
Identities = 9/17 (52%), Positives = 12/17 (70%)
Query: 257 LTAIMGPSGAGKSTLLN 273
+T + G GAGK+TLL
Sbjct: 5 VTLLTGFLGAGKTTLLR 21
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo
sapiens) [TaxId: 9606]}
Length = 172
Score = 28.2 bits (61), Expect = 0.94
Identities = 13/28 (46%), Positives = 16/28 (57%)
Query: 259 AIMGPSGAGKSTLLNILAGLTYLNFSKC 286
++G G GKSTL NI AG+ S C
Sbjct: 7 VLIGEQGVGKSTLANIFAGVHDSMDSDC 34
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo
sapiens), ARL5A [TaxId: 9606]}
Length = 177
Score = 28.0 bits (61), Expect = 0.99
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 260 IMGPSGAGKSTLLNILAG 277
I+G AGK+T+L +
Sbjct: 20 IVGLDNAGKTTILYQFSM 37
>d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal
domain {Aeropyrum pernix [TaxId: 56636]}
Length = 287
Score = 28.2 bits (61), Expect = 1.1
Identities = 10/40 (25%), Positives = 15/40 (37%), Gaps = 1/40 (2%)
Query: 237 ADFLNKEILHGISGEFKAGQLTAIMGPSGAGKSTLLNILA 276
A +L G +G + +G G GK+TL
Sbjct: 29 ARIYLNRLLSG-AGLSDVNMIYGSIGRVGIGKTTLAKFTV 67
>d2doda1 a.159.2.1 (A:651-719) Transcription elongation regulator
1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 69
Score = 26.2 bits (58), Expect = 1.2
Identities = 8/72 (11%), Positives = 28/72 (38%), Gaps = 9/72 (12%)
Query: 24 QERKSACIEQFLKLSCYIQQDDALRPKLTVTEAMMIASHLKLGFKVSTQEKKDQVSLELW 83
A ++QF + + + T + + ++ +E+K +++
Sbjct: 6 IVPLEARMKQFKDM----LLERGVSAFSTWEKELHKIVFDPRYLLLNPKERK-----QVF 56
Query: 84 NNFCKKKKKKKR 95
+ + K + +++R
Sbjct: 57 DQYVKTRAEEER 68
>d2jdid3 c.37.1.11 (D:82-357) Central domain of beta subunit of F1
ATP synthase {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 276
Score = 28.2 bits (63), Expect = 1.2
Identities = 7/22 (31%), Positives = 11/22 (50%)
Query: 255 GQLTAIMGPSGAGKSTLLNILA 276
G + G +G GK+ L+ L
Sbjct: 68 GGKIGLFGGAGVGKTVLIMELI 89
>d1bifa1 c.37.1.7 (A:37-249)
6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase,
kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 213
Score = 28.0 bits (61), Expect = 1.2
Identities = 5/20 (25%), Positives = 9/20 (45%)
Query: 257 LTAIMGPSGAGKSTLLNILA 276
L ++G GK+ + L
Sbjct: 4 LIVMVGLPARGKTYISKKLT 23
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 184
Score = 27.4 bits (59), Expect = 1.4
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 259 AIMGPSGAGKSTLLNILAG 277
I+G SG GK++L+N
Sbjct: 6 IILGDSGVGKTSLMNQYVN 24
>d2dofa1 a.159.2.1 (A:888-959) Transcription elongation regulator
1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 72
Score = 25.8 bits (57), Expect = 1.6
Identities = 13/72 (18%), Positives = 27/72 (37%), Gaps = 6/72 (8%)
Query: 24 QERKSACIEQFLKLSCYIQQDDALRPKLTVTEAMMIASHLKLGFKVSTQEKKDQVSLELW 83
Q ++ I+ F L D ++ ++ S E++++ +L+
Sbjct: 6 QHKREEAIQNFKAL----LSDMVRSSDVSWSDTRRTLRKDHRWESGSLLEREEKE--KLF 59
Query: 84 NNFCKKKKKKKR 95
N + KKKR
Sbjct: 60 NEHIEALTKKKR 71
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 175
Score = 27.3 bits (59), Expect = 1.6
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 259 AIMGPSGAGKSTLLNILAG 277
I+G SG GK++L++
Sbjct: 6 IILGDSGVGKTSLMHRYVN 24
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId:
9606]}
Length = 177
Score = 27.1 bits (59), Expect = 1.8
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 259 AIMGPSGAGKSTLLNILAG 277
I+G SG GKS+LL
Sbjct: 11 LIIGESGVGKSSLLLRFTD 29
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 169
Score = 27.1 bits (59), Expect = 2.0
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 259 AIMGPSGAGKSTLLNILAG 277
I+G S GK++ L A
Sbjct: 9 LIIGNSSVGKTSFLFRYAD 27
>d1xpua3 c.37.1.11 (A:129-417) Transcription termination factor Rho,
ATPase domain {Escherichia coli [TaxId: 562]}
Length = 289
Score = 27.3 bits (60), Expect = 2.2
Identities = 12/32 (37%), Positives = 15/32 (46%)
Query: 255 GQLTAIMGPSGAGKSTLLNILAGLTYLNFSKC 286
GQ I+ P AGK+ LL +A N C
Sbjct: 43 GQRGLIVAPPKAGKTMLLQNIAQSIAYNHPDC 74
>d1uf9a_ c.37.1.1 (A:) Dephospho-CoA kinase {Thermus thermophilus
[TaxId: 274]}
Length = 191
Score = 26.8 bits (58), Expect = 2.3
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 259 AIMGPSGAGKSTLLNILAGLTY 280
I G G+GKST+ +L Y
Sbjct: 7 GITGNIGSGKSTVAALLRSWGY 28
>d1deka_ c.37.1.1 (A:) Deoxynucleoside monophosphate kinase
{Bacteriophage T4 [TaxId: 10665]}
Length = 241
Score = 27.2 bits (59), Expect = 2.3
Identities = 4/29 (13%), Positives = 9/29 (31%), Gaps = 3/29 (10%)
Query: 259 AIMGPSGAGKSTLLNILA---GLTYLNFS 284
+ G +GK T + + +
Sbjct: 5 FLSGVKRSGKDTTADFIMSNYSAVKYQLA 33
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId:
9606]}
Length = 174
Score = 26.8 bits (58), Expect = 2.4
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 260 IMGPSGAGKSTLLNILAG 277
++G +G GKS LL+
Sbjct: 10 VIGNAGTGKSCLLHQFIE 27
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF6 [TaxId: 9606]}
Length = 173
Score = 26.8 bits (58), Expect = 2.4
Identities = 6/14 (42%), Positives = 10/14 (71%)
Query: 260 IMGPSGAGKSTLLN 273
++G AGK+T+L
Sbjct: 17 MLGLDAAGKTTILY 30
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 166
Score = 26.7 bits (58), Expect = 2.5
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 260 IMGPSGAGKSTLLNILAG 277
++G SG GKS LL
Sbjct: 7 LIGDSGVGKSCLLVRFVE 24
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 26.8 bits (58), Expect = 2.6
Identities = 6/14 (42%), Positives = 9/14 (64%)
Query: 260 IMGPSGAGKSTLLN 273
++G +GKST L
Sbjct: 7 LLGAGESGKSTFLK 20
>d1wxqa1 c.37.1.8 (A:1-319) GTP-binding protein PH0525 {Pyrococcus
horikoshii [TaxId: 53953]}
Length = 319
Score = 27.2 bits (59), Expect = 2.6
Identities = 5/17 (29%), Positives = 8/17 (47%)
Query: 259 AIMGPSGAGKSTLLNIL 275
++G GKST +
Sbjct: 4 GVVGKPNVGKSTFFSAA 20
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 164
Score = 26.6 bits (57), Expect = 2.7
Identities = 4/18 (22%), Positives = 9/18 (50%)
Query: 260 IMGPSGAGKSTLLNILAG 277
++G GKS+++
Sbjct: 7 VVGNGAVGKSSMIQRYCK 24
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 195
Score = 26.8 bits (58), Expect = 2.7
Identities = 5/14 (35%), Positives = 10/14 (71%)
Query: 260 IMGPSGAGKSTLLN 273
++G +GKST++
Sbjct: 7 LLGAGESGKSTIVK 20
>d1sq5a_ c.37.1.6 (A:) Pantothenate kinase PanK {Escherichia coli
[TaxId: 562]}
Length = 308
Score = 27.0 bits (59), Expect = 2.7
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 257 LTAIMGPSGAGKSTLLNILAGL 278
+ +I G GKST +L L
Sbjct: 82 IISIAGSVAVGKSTTARVLQAL 103
>d1jjva_ c.37.1.1 (A:) Dephospho-CoA kinase {Haemophilus influenzae
[TaxId: 727]}
Length = 205
Score = 26.8 bits (58), Expect = 2.9
Identities = 7/26 (26%), Positives = 12/26 (46%)
Query: 259 AIMGPSGAGKSTLLNILAGLTYLNFS 284
+ G G+GK+T+ N+ L
Sbjct: 6 GLTGGIGSGKTTIANLFTDLGVPLVD 31
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 26.3 bits (57), Expect = 3.0
Identities = 5/18 (27%), Positives = 10/18 (55%)
Query: 260 IMGPSGAGKSTLLNILAG 277
++G +G GK+ L+
Sbjct: 10 LIGNAGVGKTCLVRRFTQ 27
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast
(Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Length = 182
Score = 26.5 bits (57), Expect = 3.1
Identities = 8/14 (57%), Positives = 11/14 (78%)
Query: 260 IMGPSGAGKSTLLN 273
I+G GAGK+T+L
Sbjct: 22 ILGLDGAGKTTILY 35
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 173
Score = 26.3 bits (57), Expect = 3.1
Identities = 6/15 (40%), Positives = 10/15 (66%)
Query: 259 AIMGPSGAGKSTLLN 273
++G SG GK+ +L
Sbjct: 10 LLIGDSGVGKTCVLF 24
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 194
Score = 26.4 bits (57), Expect = 3.4
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 259 AIMGPSGAGKSTLLNILAG 277
++G SG GKS LL +
Sbjct: 10 LLIGNSGVGKSCLLLRFSD 28
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId:
9606]}
Length = 175
Score = 26.4 bits (57), Expect = 3.4
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 259 AIMGPSGAGKSTLLNILAG 277
++G SG GKS LL+
Sbjct: 8 VLIGDSGVGKSNLLSRFTR 26
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId:
9606]}
Length = 186
Score = 26.4 bits (57), Expect = 3.6
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 260 IMGPSGAGKSTLLN 273
+G SG GK+T L
Sbjct: 10 ALGDSGVGKTTFLY 23
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId:
9606]}
Length = 170
Score = 26.4 bits (57), Expect = 3.6
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 259 AIMGPSGAGKSTLLN 273
++G SG GK+ LL
Sbjct: 10 MLVGDSGVGKTCLLV 24
>d2dy1a2 c.37.1.8 (A:8-274) Elongation factor G (EF-G), N-terminal
(G) domain {Thermus thermophilus, EF-G-2 [TaxId: 274]}
Length = 267
Score = 26.4 bits (57), Expect = 3.6
Identities = 7/14 (50%), Positives = 12/14 (85%)
Query: 259 AIMGPSGAGKSTLL 272
A++G +G+GK+TL
Sbjct: 6 ALVGHAGSGKTTLT 19
>d1ixza_ c.37.1.20 (A:) AAA domain of cell division protein FtsH
{Thermus thermophilus [TaxId: 274]}
Length = 247
Score = 26.3 bits (58), Expect = 3.6
Identities = 13/45 (28%), Positives = 19/45 (42%), Gaps = 2/45 (4%)
Query: 239 FLNKEILHGISGEFKAGQLTAIMGPSGAGKSTLLNILAGLTYLNF 283
N H + G L ++GP G GK+ L +AG + F
Sbjct: 28 LKNPSRFHEMGARIPKGVL--LVGPPGVGKTHLARAVAGEARVPF 70
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens)
[TaxId: 9606]}
Length = 166
Score = 26.1 bits (56), Expect = 3.6
Identities = 8/23 (34%), Positives = 11/23 (47%), Gaps = 4/23 (17%)
Query: 251 EFKAGQLTAIMGPSGAGKSTLLN 273
E+K ++G G GKS L
Sbjct: 3 EYK----LVVVGAGGVGKSALTI 21
>d1wmua_ a.1.1.2 (A:) Hemoglobin, alpha-chain {Aldabra giant
tortoise (Geochelone gigantea) [TaxId: 167804]}
Length = 141
Score = 25.8 bits (56), Expect = 3.7
Identities = 12/89 (13%), Positives = 24/89 (26%)
Query: 151 ISRLVPHLASLGLPCPAYHNPADFPNLAKQGRTVVATIHTPSALLFEKFDSLYALAKGHC 210
+ R+ S P + D + G+ VV + + +L L+ H
Sbjct: 29 LERMFIVYPSTKTYFPHFDLHHDSEQIRHHGKKVVGALGDAVKHIDNLSATLSELSNLHA 88
Query: 211 IYRGSISRLVPHLASLGLPCPAYHNPADF 239
L+ H ++
Sbjct: 89 YNLRVDPVNFKLLSHCFQVVLGAHLGREY 117
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 26.4 bits (57), Expect = 3.7
Identities = 5/14 (35%), Positives = 9/14 (64%)
Query: 260 IMGPSGAGKSTLLN 273
++G +GKST +
Sbjct: 7 LLGTGESGKSTFIK 20
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit)
{Cow (Bos taurus) [TaxId: 9913]}
Length = 221
Score = 26.3 bits (57), Expect = 4.1
Identities = 5/14 (35%), Positives = 10/14 (71%)
Query: 260 IMGPSGAGKSTLLN 273
++G +GKST++
Sbjct: 11 LLGAGESGKSTIVK 24
>d1jala1 c.37.1.8 (A:1-278) YchF GTP-binding protein N-terminal
domain {Haemophilus influenzae [TaxId: 727]}
Length = 278
Score = 26.4 bits (58), Expect = 4.1
Identities = 12/24 (50%), Positives = 13/24 (54%), Gaps = 4/24 (16%)
Query: 252 FKAGQLTAIMGPSGAGKSTLLNIL 275
FK G I+G GKSTL N L
Sbjct: 3 FKCG----IVGLPNVGKSTLFNAL 22
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 26.1 bits (56), Expect = 4.2
Identities = 7/23 (30%), Positives = 13/23 (56%), Gaps = 4/23 (17%)
Query: 251 EFKAGQLTAIMGPSGAGKSTLLN 273
+++ A+ G G GKS+L+
Sbjct: 2 DYR----VAVFGAGGVGKSSLVL 20
>d3ctaa1 a.4.5.28 (A:5-89) Ta1064 (RFK), N-terminal domain
{Thermoplasma acidophilum [TaxId: 2303]}
Length = 85
Score = 24.9 bits (54), Expect = 4.2
Identities = 12/58 (20%), Positives = 21/58 (36%)
Query: 140 LAKGHCIYRGSISRLVPHLASLGLPCPAYHNPADFPNLAKQGRTVVATIHTPSALLFE 197
LA I + S SR++ L G N+ ++G V+ T + +
Sbjct: 27 LADMLGISQQSASRIIIDLEKNGYITRTVTKRGQILNITEKGLDVLYTEFADLSRILA 84
>d1lv7a_ c.37.1.20 (A:) AAA domain of cell division protein FtsH
{Escherichia coli [TaxId: 562]}
Length = 256
Score = 26.3 bits (58), Expect = 4.3
Identities = 12/45 (26%), Positives = 19/45 (42%), Gaps = 2/45 (4%)
Query: 239 FLNKEILHGISGEFKAGQLTAIMGPSGAGKSTLLNILAGLTYLNF 283
+ G+ G L ++GP G GK+ L +AG + F
Sbjct: 31 LREPSRFQKLGGKIPKGVL--MVGPPGTGKTLLAKAIAGEAKVPF 73
>d2bv3a2 c.37.1.8 (A:7-282) Elongation factor G (EF-G), N-terminal
(G) domain {Thermus thermophilus [TaxId: 274]}
Length = 276
Score = 26.2 bits (57), Expect = 4.3
Identities = 5/14 (35%), Positives = 6/14 (42%)
Query: 259 AIMGPSGAGKSTLL 272
I AGK+T
Sbjct: 10 GIAAHIDAGKTTTT 23
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 26.2 bits (56), Expect = 4.4
Identities = 5/14 (35%), Positives = 9/14 (64%)
Query: 260 IMGPSGAGKSTLLN 273
++G G GK+T +
Sbjct: 8 LVGDGGTGKTTFVK 21
>d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS
kinase) {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Length = 208
Score = 25.9 bits (56), Expect = 4.4
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 260 IMGPSGAGKSTLLN 273
+ G S +GKSTL
Sbjct: 29 LTGLSASGKSTLAV 42
>d1vhta_ c.37.1.1 (A:) Dephospho-CoA kinase {Escherichia coli
[TaxId: 562]}
Length = 208
Score = 26.0 bits (56), Expect = 4.5
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 259 AIMGPSGAGKSTLLNILAGL 278
A+ G G+GKST+ N A L
Sbjct: 7 ALTGGIGSGKSTVANAFADL 26
>d1c52a_ a.3.1.1 (A:) Cytochrome c552 {Thermus thermophilus [TaxId:
274]}
Length = 131
Score = 25.5 bits (55), Expect = 4.8
Identities = 12/61 (19%), Positives = 23/61 (37%)
Query: 221 PHLASLGLPCPAYHNPADFLNKEILHGISGEFKAGQLTAIMGPSGAGKSTLLNILAGLTY 280
P LA A ++L +L+G+ G+ + + S + I A L +
Sbjct: 27 PPLAGHVAEILAKEGGREYLILVLLYGLQGQIEVKGMKYNGVMSSFAQLKDEEIAAVLNH 86
Query: 281 L 281
+
Sbjct: 87 I 87
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 25.8 bits (55), Expect = 5.0
Identities = 6/27 (22%), Positives = 11/27 (40%)
Query: 260 IMGPSGAGKSTLLNILAGLTYLNFSKC 286
++G G GKS L +++
Sbjct: 11 VVGGGGVGKSALTIQFIQSYFVSDYDP 37
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId:
10090]}
Length = 165
Score = 25.8 bits (55), Expect = 5.0
Identities = 5/18 (27%), Positives = 8/18 (44%)
Query: 260 IMGPSGAGKSTLLNILAG 277
++G S GK+ L
Sbjct: 7 VIGDSNVGKTCLTYRFCA 24
>d1svma_ c.37.1.20 (A:) Papillomavirus large T antigen helicase
domain {Simian virus 40 [TaxId: 10633]}
Length = 362
Score = 26.2 bits (57), Expect = 5.1
Identities = 8/24 (33%), Positives = 10/24 (41%)
Query: 260 IMGPSGAGKSTLLNILAGLTYLNF 283
GP +GK+TL L L
Sbjct: 159 FKGPIDSGKTTLAAALLELCGGKA 182
>d1t9ha2 c.37.1.8 (A:68-298) Probable GTPase EngC (YjeQ), C-terminal
domain {Bacillus subtilis [TaxId: 1423]}
Length = 231
Score = 25.8 bits (56), Expect = 5.3
Identities = 11/50 (22%), Positives = 16/50 (32%)
Query: 228 LPCPAYHNPADFLNKEILHGISGEFKAGQLTAIMGPSGAGKSTLLNILAG 277
Y + + T G SG GKS+LLN ++
Sbjct: 70 YRNIGYDVYLTSSKDQDSLADIIPHFQDKTTVFAGQSGVGKSSLLNAISP 119
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId:
9606]}
Length = 166
Score = 25.6 bits (55), Expect = 5.3
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 260 IMGPSGAGKSTLLNILA 276
I+G G GKS LL+
Sbjct: 9 IIGDMGVGKSCLLHQFT 25
>d2jdia3 c.37.1.11 (A:95-379) Central domain of alpha subunit of F1
ATP synthase {Cow (Bos taurus) [TaxId: 9913]}
Length = 285
Score = 25.9 bits (57), Expect = 5.4
Identities = 6/18 (33%), Positives = 10/18 (55%)
Query: 255 GQLTAIMGPSGAGKSTLL 272
GQ I+G GK+++
Sbjct: 68 GQRELIIGDRQTGKTSIA 85
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Length = 177
Score = 25.7 bits (55), Expect = 5.4
Identities = 6/17 (35%), Positives = 10/17 (58%)
Query: 260 IMGPSGAGKSTLLNILA 276
I+G GK+ LL + +
Sbjct: 7 IVGDGACGKTCLLIVNS 23
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo
sapiens) [TaxId: 9606]}
Length = 167
Score = 25.5 bits (54), Expect = 6.1
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 259 AIMGPSGAGKSTLLN 273
AI+G GKS+L
Sbjct: 8 AILGYRSVGKSSLTI 22
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 170
Score = 25.4 bits (54), Expect = 6.1
Identities = 4/18 (22%), Positives = 10/18 (55%)
Query: 260 IMGPSGAGKSTLLNILAG 277
++G + GKS+++
Sbjct: 8 LLGEAAVGKSSIVLRFVS 25
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 25.3 bits (54), Expect = 6.4
Identities = 8/23 (34%), Positives = 11/23 (47%), Gaps = 4/23 (17%)
Query: 251 EFKAGQLTAIMGPSGAGKSTLLN 273
E+K ++G G GKS L
Sbjct: 3 EYK----VVVLGSGGVGKSALTV 21
>d1ni3a1 c.37.1.8 (A:11-306) YchF GTP-binding protein N-terminal
domain {Fission yeast (Schizosaccharomyces pombe)
[TaxId: 4896]}
Length = 296
Score = 25.9 bits (56), Expect = 6.4
Identities = 6/17 (35%), Positives = 8/17 (47%)
Query: 259 AIMGPSGAGKSTLLNIL 275
I+G GKST +
Sbjct: 14 GIVGMPNVGKSTFFRAI 30
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin
(Saguinus oedipus) [TaxId: 9490]}
Length = 168
Score = 25.3 bits (54), Expect = 6.6
Identities = 6/14 (42%), Positives = 8/14 (57%)
Query: 260 IMGPSGAGKSTLLN 273
++G G GKS L
Sbjct: 9 MVGSGGVGKSALTL 22
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 167
Score = 25.4 bits (54), Expect = 7.1
Identities = 5/14 (35%), Positives = 11/14 (78%)
Query: 260 IMGPSGAGKSTLLN 273
++G +G GKS+++
Sbjct: 9 LLGDTGVGKSSIMW 22
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 175
Score = 25.3 bits (54), Expect = 7.4
Identities = 7/28 (25%), Positives = 15/28 (53%)
Query: 259 AIMGPSGAGKSTLLNILAGLTYLNFSKC 286
++G + +GKS+L++ +Y K
Sbjct: 9 GVLGDARSGKSSLIHRFLTGSYQVLEKT 36
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 25.3 bits (54), Expect = 7.7
Identities = 8/23 (34%), Positives = 11/23 (47%), Gaps = 4/23 (17%)
Query: 251 EFKAGQLTAIMGPSGAGKSTLLN 273
E+K ++G G GKS L
Sbjct: 3 EYK----LVVLGSGGVGKSALTV 21
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId:
9606]}
Length = 167
Score = 25.3 bits (54), Expect = 7.8
Identities = 4/14 (28%), Positives = 9/14 (64%)
Query: 260 IMGPSGAGKSTLLN 273
++G GK++L+
Sbjct: 8 LLGEGCVGKTSLVL 21
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId:
9606]}
Length = 164
Score = 25.3 bits (54), Expect = 8.1
Identities = 4/14 (28%), Positives = 8/14 (57%)
Query: 260 IMGPSGAGKSTLLN 273
+G GK++L+
Sbjct: 5 FLGEQSVGKTSLIT 18
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 25.2 bits (54), Expect = 8.3
Identities = 8/14 (57%), Positives = 10/14 (71%)
Query: 260 IMGPSGAGKSTLLN 273
I+G +G GKS LL
Sbjct: 8 IIGDTGVGKSCLLL 21
>d1n0ua2 c.37.1.8 (A:3-343) Elongation factor 2 (eEF-2), N-terminal
(G) domain {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 341
Score = 25.5 bits (55), Expect = 8.4
Identities = 5/14 (35%), Positives = 8/14 (57%)
Query: 259 AIMGPSGAGKSTLL 272
+++ GKSTL
Sbjct: 21 SVIAHVDHGKSTLT 34
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId:
10090]}
Length = 179
Score = 25.0 bits (53), Expect = 8.5
Identities = 7/17 (41%), Positives = 12/17 (70%)
Query: 260 IMGPSGAGKSTLLNILA 276
++G S GK+ LL++ A
Sbjct: 7 VVGDSQCGKTALLHVFA 23
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth
inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Length = 168
Score = 25.0 bits (53), Expect = 8.6
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 260 IMGPSGAGKSTLLN 273
I G +G GKS L+
Sbjct: 7 IFGRAGVGKSALVV 20
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 25.0 bits (53), Expect = 8.7
Identities = 6/14 (42%), Positives = 10/14 (71%)
Query: 260 IMGPSGAGKSTLLN 273
++G S GKS+L+
Sbjct: 11 LLGESAVGKSSLVL 24
>d1yksa1 c.37.1.14 (A:185-324) YFV helicase domain {Yellow fever
virus [TaxId: 11089]}
Length = 140
Score = 24.6 bits (52), Expect = 9.1
Identities = 7/19 (36%), Positives = 9/19 (47%)
Query: 252 FKAGQLTAIMGPSGAGKST 270
K G T + GAGK+
Sbjct: 4 LKKGMTTVLDFHPGAGKTR 22
>d1a5ta2 c.37.1.20 (A:1-207) delta prime subunit of DNA polymerase
III, N-domain {Escherichia coli [TaxId: 562]}
Length = 207
Score = 25.1 bits (53), Expect = 10.0
Identities = 7/38 (18%), Positives = 16/38 (42%), Gaps = 3/38 (7%)
Query: 242 KEILHGISGEFKAGQLT-AIM--GPSGAGKSTLLNILA 276
+ + ++AG+ A++ G G L+ L+
Sbjct: 8 RPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALS 45
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.320 0.134 0.398
Gapped
Lambda K H
0.267 0.0435 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,009,340
Number of extensions: 45140
Number of successful extensions: 388
Number of sequences better than 10.0: 1
Number of HSP's gapped: 388
Number of HSP's successfully gapped: 220
Length of query: 286
Length of database: 2,407,596
Length adjustment: 84
Effective length of query: 202
Effective length of database: 1,254,276
Effective search space: 253363752
Effective search space used: 253363752
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)