Query psy8969
Match_columns 1230
No_of_seqs 669 out of 5117
Neff 6.9
Searched_HMMs 29240
Date Sat Aug 17 00:20:35 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8969.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/8969hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3m6a_A ATP-dependent protease 100.0 7.6E-82 2.6E-86 774.6 36.2 497 277-784 4-530 (543)
2 3k1j_A LON protease, ATP-depen 100.0 1.2E-43 4.3E-48 441.7 10.1 425 319-786 10-579 (604)
3 2i13_A AART; DNA binding, zinc 100.0 5.4E-34 1.8E-38 302.5 6.9 185 806-1225 6-190 (190)
4 1g41_A Heat shock protein HSLU 100.0 8.1E-32 2.8E-36 319.0 17.5 269 343-618 4-437 (444)
5 2i13_A AART; DNA binding, zinc 100.0 3.5E-32 1.2E-36 288.5 8.2 116 784-905 14-129 (190)
6 4b4t_K 26S protease regulatory 100.0 4.4E-31 1.5E-35 312.1 4.1 280 228-539 51-357 (428)
7 1tf6_A Protein (transcription 100.0 2E-29 6.9E-34 267.3 11.7 176 817-1222 8-190 (190)
8 1tf6_A Protein (transcription 99.9 2.7E-27 9.2E-32 250.9 12.6 117 787-905 8-130 (190)
9 1rre_A ATP-dependent protease 99.9 1.9E-26 6.5E-31 245.8 9.8 156 619-785 3-188 (200)
10 2x36_A LON protease homolog, m 99.9 2E-26 6.7E-31 246.6 9.3 156 619-785 2-196 (207)
11 4b4t_J 26S protease regulatory 99.9 5.2E-26 1.8E-30 265.1 13.5 176 345-539 139-332 (405)
12 4b4t_H 26S protease regulatory 99.9 2.5E-25 8.5E-30 262.2 13.6 176 345-539 200-393 (467)
13 4b4t_I 26S protease regulatory 99.9 1.6E-25 5.6E-30 261.4 11.5 176 345-539 173-366 (437)
14 4b4t_M 26S protease regulatory 99.9 3.7E-25 1.3E-29 261.6 12.5 171 347-539 174-365 (434)
15 4b4t_L 26S protease subunit RP 99.9 4.6E-25 1.6E-29 261.1 12.1 174 347-539 174-365 (437)
16 3hws_A ATP-dependent CLP prote 99.9 5.3E-24 1.8E-28 249.0 15.8 268 344-619 5-354 (363)
17 3ljc_A ATP-dependent protease 99.9 1.4E-23 4.7E-28 233.2 17.0 136 134-274 112-250 (252)
18 2gli_A Protein (five-finger GL 99.9 5.7E-24 2E-28 217.2 11.1 84 1136-1221 67-155 (155)
19 3t15_A Ribulose bisphosphate c 99.9 6.7E-24 2.3E-28 241.1 11.2 178 352-541 5-200 (293)
20 1um8_A ATP-dependent CLP prote 99.9 1E-22 3.6E-27 239.1 19.7 262 344-613 11-364 (376)
21 1ofh_A ATP-dependent HSL prote 99.9 1.9E-22 6.4E-27 229.2 18.8 256 343-614 4-299 (310)
22 1z0w_A Putative protease LA ho 99.9 7.2E-24 2.5E-28 227.1 6.1 149 623-784 8-186 (207)
23 1r6b_X CLPA protein; AAA+, N-t 99.9 2.7E-21 9.2E-26 247.2 26.1 294 290-596 389-724 (758)
24 1xhk_A Putative protease LA ho 99.9 3.2E-23 1.1E-27 219.4 6.7 109 661-784 76-184 (187)
25 2gli_A Protein (five-finger GL 99.9 4.7E-22 1.6E-26 203.0 9.7 84 820-905 2-93 (155)
26 1xwi_A SKD1 protein; VPS4B, AA 99.9 1.7E-20 5.7E-25 216.0 22.5 210 351-585 9-227 (322)
27 3cf2_A TER ATPase, transitiona 99.9 2.3E-22 7.7E-27 253.4 6.6 213 350-585 473-707 (806)
28 3pxi_A Negative regulator of g 99.8 4.4E-21 1.5E-25 245.2 17.9 256 319-595 455-732 (758)
29 4fcw_A Chaperone protein CLPB; 99.8 2.1E-20 7.3E-25 212.8 18.0 237 344-591 7-281 (311)
30 3cf2_A TER ATPase, transitiona 99.8 3.5E-21 1.2E-25 242.6 11.7 210 350-582 200-428 (806)
31 1qzm_A ATP-dependent protease 99.8 5.4E-21 1.8E-25 177.0 9.8 93 524-616 1-94 (94)
32 2jp9_A Wilms tumor 1; DNA bind 99.8 3.8E-21 1.3E-25 187.2 8.3 116 787-904 2-119 (119)
33 3syl_A Protein CBBX; photosynt 99.8 2.3E-20 7.8E-25 212.6 14.5 219 341-595 18-269 (309)
34 1qvr_A CLPB protein; coiled co 99.8 2.6E-19 8.8E-24 231.5 25.9 261 324-595 527-827 (854)
35 3vfd_A Spastin; ATPase, microt 99.8 4.4E-20 1.5E-24 217.9 16.4 224 301-567 81-313 (389)
36 3eie_A Vacuolar protein sortin 99.8 6.2E-20 2.1E-24 211.1 17.1 204 353-581 17-228 (322)
37 1ubd_C Protein (YY1 zinc finge 99.8 7.8E-21 2.7E-25 186.6 8.2 119 788-909 2-122 (124)
38 2lt7_A Transcriptional regulat 99.8 2E-21 6.8E-26 194.9 2.7 93 1129-1225 15-107 (133)
39 2zan_A Vacuolar protein sortin 99.8 2.9E-19 1E-23 214.4 20.4 214 353-591 133-355 (444)
40 2dlq_A GLI-kruppel family memb 99.8 3.8E-20 1.3E-24 181.2 9.7 115 787-907 3-120 (124)
41 2qp9_X Vacuolar protein sortin 99.8 2.5E-19 8.5E-24 208.9 18.0 210 353-587 50-267 (355)
42 1ubd_C Protein (YY1 zinc finge 99.8 1.4E-20 4.9E-25 184.7 6.1 89 1136-1224 34-122 (124)
43 1ypw_A Transitional endoplasmi 99.8 9.4E-22 3.2E-26 251.6 -3.5 231 328-581 451-707 (806)
44 2lt7_A Transcriptional regulat 99.8 1.4E-20 4.7E-25 188.8 4.0 105 784-894 15-125 (133)
45 3cf0_A Transitional endoplasmi 99.8 1E-19 3.6E-24 207.3 11.1 166 352-539 13-199 (301)
46 2rpc_A Zinc finger protein ZIC 99.8 6.6E-20 2.3E-24 187.3 8.3 92 1136-1227 62-153 (155)
47 2rpc_A Zinc finger protein ZIC 99.8 1.2E-19 4.2E-24 185.3 10.1 124 785-912 19-153 (155)
48 2jp9_A Wilms tumor 1; DNA bind 99.8 4.2E-20 1.4E-24 179.7 6.3 82 1136-1219 36-119 (119)
49 2qz4_A Paraplegin; AAA+, SPG7, 99.8 7.3E-19 2.5E-23 195.0 16.8 168 353-539 5-190 (262)
50 3h4m_A Proteasome-activating n 99.8 5.3E-19 1.8E-23 199.1 15.2 168 353-539 16-201 (285)
51 1lv7_A FTSH; alpha/beta domain 99.8 1.6E-18 5.5E-23 192.4 18.4 222 353-611 11-249 (257)
52 2dlq_A GLI-kruppel family memb 99.8 2.3E-19 7.7E-24 175.7 9.3 82 1137-1222 36-121 (124)
53 2ee8_A Protein ODD-skipped-rel 99.8 1.7E-19 5.7E-24 172.2 7.7 94 1130-1227 11-104 (106)
54 3d8b_A Fidgetin-like protein 1 99.8 1.7E-18 5.9E-23 202.0 17.5 190 354-567 84-282 (357)
55 2dmd_A Zinc finger protein 64, 99.8 1.9E-19 6.6E-24 168.5 7.1 92 1131-1226 3-94 (96)
56 3b9p_A CG5977-PA, isoform A; A 99.8 7.6E-18 2.6E-22 190.8 18.4 196 353-578 20-230 (297)
57 2x8a_A Nuclear valosin-contain 99.8 1.6E-18 5.4E-23 194.9 12.5 241 351-613 7-263 (274)
58 2ce7_A Cell division protein F 99.8 7.6E-18 2.6E-22 202.3 18.7 164 354-539 16-199 (476)
59 1a1h_A QGSR zinc finger peptid 99.7 3E-19 1E-23 164.9 3.7 86 1134-1223 2-89 (90)
60 2kmk_A Zinc finger protein GFI 99.7 3.5E-19 1.2E-23 161.3 3.3 82 1136-1221 1-82 (82)
61 3pvs_A Replication-associated 99.7 1.9E-17 6.5E-22 198.3 18.0 219 354-620 26-250 (447)
62 2dmi_A Teashirt homolog 3; zin 99.7 2E-18 6.8E-23 167.4 6.2 102 1122-1227 5-111 (115)
63 1wjp_A Zinc finger protein 295 99.7 2E-18 6.8E-23 165.4 5.6 95 1126-1227 6-101 (107)
64 2ebt_A Krueppel-like factor 5; 99.7 2.5E-18 8.7E-23 161.9 5.5 88 1132-1221 11-100 (100)
65 2yt9_A Zinc finger-containing 99.7 2.2E-18 7.4E-23 161.0 4.8 88 1132-1223 3-93 (95)
66 3pfi_A Holliday junction ATP-d 99.7 1.5E-16 5E-21 183.6 20.8 219 354-611 29-251 (338)
67 2csh_A Zinc finger protein 297 99.7 2.1E-18 7.2E-23 165.8 3.8 89 1130-1223 4-92 (110)
68 3hu3_A Transitional endoplasmi 99.7 8.8E-18 3E-22 203.2 10.0 165 353-539 203-385 (489)
69 2wbs_A Krueppel-like factor 4; 99.7 5.1E-18 1.8E-22 156.3 5.1 85 1134-1220 3-89 (89)
70 2dhr_A FTSH; AAA+ protein, hex 99.7 4E-17 1.4E-21 197.1 13.9 223 350-612 27-269 (499)
71 2r62_A Cell division protease 99.7 1.6E-17 5.4E-22 185.4 8.5 176 354-539 11-196 (268)
72 3uk6_A RUVB-like 2; hexameric 99.7 2.4E-16 8.2E-21 183.8 18.1 222 354-612 44-328 (368)
73 2dmi_A Teashirt homolog 3; zin 99.7 1.6E-17 5.3E-22 161.1 6.4 101 805-909 3-108 (115)
74 4gzn_C ZFP-57, zinc finger pro 99.7 5.1E-18 1.7E-22 145.9 2.4 58 1162-1223 2-59 (60)
75 4gzn_C ZFP-57, zinc finger pro 99.7 1.4E-17 4.9E-22 143.1 4.0 59 1133-1193 1-59 (60)
76 3u61_B DNA polymerase accessor 99.7 8.4E-17 2.9E-21 184.7 10.6 207 354-612 26-235 (324)
77 3te6_A Regulatory protein SIR3 99.7 9.3E-16 3.2E-20 174.9 18.5 229 358-610 24-311 (318)
78 1ixz_A ATP-dependent metallopr 99.7 6E-16 2.1E-20 171.4 15.4 224 354-611 16-253 (254)
79 2r44_A Uncharacterized protein 99.7 1.8E-15 6.2E-20 174.2 19.7 203 345-568 18-239 (331)
80 2c9o_A RUVB-like 1; hexameric 99.6 1.1E-15 3.9E-20 183.9 18.0 102 352-464 35-142 (456)
81 2chg_A Replication factor C sm 99.6 1.7E-15 5.7E-20 161.9 17.0 202 352-613 15-225 (226)
82 1iy2_A ATP-dependent metallopr 99.6 1.3E-15 4.4E-20 171.2 16.4 228 350-611 36-277 (278)
83 2ee8_A Protein ODD-skipped-rel 99.6 2.8E-16 9.7E-21 149.7 8.5 91 787-883 13-103 (106)
84 1a1h_A QGSR zinc finger peptid 99.6 1.5E-16 5E-21 146.8 5.6 87 819-907 2-88 (90)
85 1hqc_A RUVB; extended AAA-ATPa 99.6 2.8E-15 9.7E-20 171.5 17.3 200 354-585 12-215 (324)
86 1d2n_A N-ethylmaleimide-sensit 99.6 5.6E-16 1.9E-20 173.5 10.5 205 350-585 29-246 (272)
87 2dmd_A Zinc finger protein 64, 99.6 5.7E-16 2E-20 144.7 8.8 87 788-880 5-91 (96)
88 2j7j_A Transcription factor II 99.6 1.3E-16 4.5E-21 145.1 2.9 80 1136-1220 1-85 (85)
89 1llm_C Chimera of ZIF23-GCN4; 99.6 2.4E-17 8.1E-22 152.3 -2.8 83 1134-1221 1-83 (88)
90 2csh_A Zinc finger protein 297 99.6 7E-16 2.4E-20 148.1 6.8 88 815-907 4-91 (110)
91 1g8p_A Magnesium-chelatase 38 99.6 8.5E-15 2.9E-19 169.2 16.4 232 354-612 24-320 (350)
92 2cot_A Zinc finger protein 435 99.6 7.8E-16 2.7E-20 138.3 5.9 67 1129-1197 11-77 (77)
93 2kmk_A Zinc finger protein GFI 99.6 6.6E-16 2.3E-20 139.6 5.5 82 821-906 1-82 (82)
94 2qby_B CDC6 homolog 3, cell di 99.6 1.9E-14 6.4E-19 168.4 18.3 222 354-612 20-268 (384)
95 1wjp_A Zinc finger protein 295 99.6 9.6E-16 3.3E-20 146.7 6.0 90 786-884 11-101 (107)
96 3f9v_A Minichromosome maintena 99.6 5.2E-16 1.8E-20 192.2 5.2 245 346-611 287-584 (595)
97 1iqp_A RFCS; clamp loader, ext 99.6 1.3E-14 4.3E-19 165.7 15.9 200 354-613 25-233 (327)
98 2dlk_A Novel protein; ZF-C2H2 99.6 4E-16 1.4E-20 140.5 2.6 74 1132-1207 3-79 (79)
99 2bjv_A PSP operon transcriptio 99.6 9.5E-15 3.2E-19 162.8 14.2 212 354-586 6-238 (265)
100 2ebt_A Krueppel-like factor 5; 99.6 2.2E-15 7.7E-20 141.6 7.7 87 819-905 13-99 (100)
101 1sxj_D Activator 1 41 kDa subu 99.6 4.4E-15 1.5E-19 171.7 11.1 218 353-612 36-261 (353)
102 2yt9_A Zinc finger-containing 99.6 3.4E-15 1.2E-19 139.1 7.8 86 817-906 3-91 (95)
103 1ojl_A Transcriptional regulat 99.6 1.7E-14 5.7E-19 164.6 14.9 211 353-585 1-232 (304)
104 2wbs_A Krueppel-like factor 4; 99.6 2.5E-15 8.4E-20 138.2 6.1 85 820-904 4-88 (89)
105 2gqj_A Zinc finger protein KIA 99.6 5.4E-16 1.9E-20 146.5 1.5 79 1144-1226 4-84 (98)
106 2chq_A Replication factor C sm 99.5 6.8E-15 2.3E-19 167.3 10.5 200 354-613 17-225 (319)
107 3nbx_X ATPase RAVA; AAA+ ATPas 99.5 7.3E-15 2.5E-19 177.6 10.4 239 345-608 13-280 (500)
108 1njg_A DNA polymerase III subu 99.5 1E-13 3.6E-18 149.6 18.4 213 354-612 23-249 (250)
109 1ypw_A Transitional endoplasmi 99.5 5.4E-15 1.8E-19 189.3 9.6 167 351-539 201-385 (806)
110 1l8q_A Chromosomal replication 99.5 3.2E-14 1.1E-18 163.4 14.9 170 380-587 36-214 (324)
111 3pxg_A Negative regulator of g 99.5 3.5E-14 1.2E-18 171.4 15.6 164 354-566 180-359 (468)
112 1jbk_A CLPB protein; beta barr 99.5 9.4E-15 3.2E-19 152.4 8.1 155 350-534 18-193 (195)
113 2v1u_A Cell division control p 99.5 1.2E-13 4.1E-18 161.1 18.1 230 354-612 19-274 (387)
114 1sxj_A Activator 1 95 kDa subu 99.5 6.7E-14 2.3E-18 171.0 16.5 203 352-585 37-256 (516)
115 1sxj_B Activator 1 37 kDa subu 99.5 9.1E-14 3.1E-18 158.3 14.9 200 354-613 21-230 (323)
116 1x6e_A Zinc finger protein 24; 99.5 8.2E-15 2.8E-19 129.9 4.5 66 1154-1223 4-69 (72)
117 2ct1_A Transcriptional repress 99.5 1E-14 3.6E-19 130.9 5.1 73 1151-1227 2-77 (77)
118 2lce_A B-cell lymphoma 6 prote 99.5 5.9E-15 2E-19 131.5 3.2 63 1131-1195 12-74 (74)
119 2ghf_A ZHX1, zinc fingers and 99.5 6.1E-15 2.1E-19 140.6 3.2 66 1131-1198 13-83 (102)
120 2lv2_A Insulinoma-associated p 99.5 1.5E-14 5.2E-19 133.2 5.4 64 1156-1223 20-84 (85)
121 2dlk_A Novel protein; ZF-C2H2 99.5 2.1E-14 7.1E-19 129.1 6.0 76 817-892 3-79 (79)
122 1x6h_A Transcriptional repress 99.5 1.6E-14 5.4E-19 131.9 5.3 72 1152-1227 3-78 (86)
123 2cot_A Zinc finger protein 435 99.5 2.1E-14 7E-19 129.0 5.8 71 1153-1227 7-77 (77)
124 1sxj_C Activator 1 40 kDa subu 99.5 1.1E-13 3.8E-18 160.0 13.4 205 354-613 25-238 (340)
125 2z4s_A Chromosomal replication 99.5 1.3E-13 4.6E-18 165.0 14.1 191 381-614 130-332 (440)
126 3bos_A Putative DNA replicatio 99.5 8.1E-13 2.8E-17 143.5 18.8 194 359-612 36-241 (242)
127 2p65_A Hypothetical protein PF 99.5 4.2E-14 1.4E-18 147.2 7.3 150 348-527 16-187 (187)
128 1x6h_A Transcriptional repress 99.5 3.5E-14 1.2E-18 129.6 5.7 80 808-891 2-85 (86)
129 2ctd_A Zinc finger protein 512 99.5 1.3E-14 4.3E-19 137.0 2.5 76 1143-1223 13-90 (96)
130 2lce_A B-cell lymphoma 6 prote 99.5 3.4E-14 1.2E-18 126.5 4.9 64 1158-1225 11-74 (74)
131 1f2i_G Fusion of N-terminal 17 99.4 2.7E-14 9.4E-19 126.6 4.0 69 1150-1220 4-73 (73)
132 2j7j_A Transcription factor II 99.4 4.6E-14 1.6E-18 128.2 5.1 80 821-905 1-85 (85)
133 1in4_A RUVB, holliday junction 99.4 1.7E-12 5.8E-17 149.9 19.4 220 354-612 25-248 (334)
134 1x5w_A Zinc finger protein 64, 99.4 5.1E-14 1.7E-18 123.9 5.0 64 1158-1225 3-66 (70)
135 2wbt_A B-129; zinc finger; 2.7 99.4 1.2E-14 4.1E-19 143.8 0.8 115 785-907 6-126 (129)
136 3pxi_A Negative regulator of g 99.4 4.9E-13 1.7E-17 170.9 15.7 165 354-567 180-360 (758)
137 1sxj_E Activator 1 40 kDa subu 99.4 4.8E-13 1.6E-17 155.0 13.6 193 354-585 14-241 (354)
138 2lv2_A Insulinoma-associated p 99.4 6.2E-14 2.1E-18 129.1 4.6 63 1129-1193 21-84 (85)
139 1jr3_A DNA polymerase III subu 99.4 1.1E-12 3.8E-17 152.7 16.4 214 354-613 16-243 (373)
140 1llm_C Chimera of ZIF23-GCN4; 99.4 7.4E-15 2.5E-19 135.4 -1.8 83 819-906 1-83 (88)
141 1x5w_A Zinc finger protein 64, 99.4 4.3E-14 1.5E-18 124.4 3.0 64 1130-1195 3-66 (70)
142 1x6e_A Zinc finger protein 24; 99.4 5.4E-14 1.9E-18 124.6 3.4 66 1127-1194 5-70 (72)
143 2wbt_A B-129; zinc finger; 2.7 99.4 4.6E-15 1.6E-19 146.7 -4.0 82 1135-1223 40-127 (129)
144 1fnn_A CDC6P, cell division co 99.4 2.2E-12 7.4E-17 150.8 17.9 210 354-586 17-252 (389)
145 2drp_A Protein (tramtrack DNA- 99.4 6.1E-14 2.1E-18 121.8 3.5 62 1156-1221 2-65 (66)
146 1qvr_A CLPB protein; coiled co 99.4 6.6E-13 2.2E-17 171.7 12.8 185 347-567 163-367 (854)
147 1a5t_A Delta prime, HOLB; zinc 99.4 4.1E-12 1.4E-16 146.7 17.5 184 359-583 7-207 (334)
148 3uk3_C Zinc finger protein 217 99.4 2E-13 6.9E-18 114.7 3.5 57 1161-1221 1-57 (57)
149 1r6b_X CLPA protein; AAA+, N-t 99.4 5.7E-12 2E-16 161.1 18.6 188 348-567 180-384 (758)
150 2gqj_A Zinc finger protein KIA 99.4 1.6E-13 5.5E-18 129.5 3.0 76 803-882 6-83 (98)
151 2qby_A CDC6 homolog 1, cell di 99.4 4.1E-12 1.4E-16 147.9 15.1 207 354-584 20-248 (386)
152 2ghf_A ZHX1, zinc fingers and 99.3 3E-13 1E-17 128.9 3.8 68 1157-1228 11-83 (102)
153 1bbo_A Human enhancer-binding 99.3 2.9E-13 9.9E-18 113.7 3.2 56 1164-1223 1-56 (57)
154 3uk3_C Zinc finger protein 217 99.3 2E-13 7E-18 114.7 1.7 57 1133-1191 1-57 (57)
155 2gno_A DNA polymerase III, gam 99.3 3.3E-12 1.1E-16 145.5 12.2 140 358-539 1-152 (305)
156 2d9h_A Zinc finger protein 692 99.3 5E-13 1.7E-17 120.1 3.5 63 1158-1224 1-67 (78)
157 1bbo_A Human enhancer-binding 99.3 1.2E-12 4E-17 110.0 4.2 56 1136-1193 1-56 (57)
158 2adr_A ADR1; transcription reg 99.3 9.3E-13 3.2E-17 111.9 3.4 57 1163-1223 1-58 (60)
159 2ctd_A Zinc finger protein 512 99.3 1.9E-12 6.5E-17 122.0 5.3 78 801-883 14-93 (96)
160 2ej4_A Zinc finger protein ZIC 99.3 9.3E-13 3.2E-17 122.6 3.0 63 1134-1198 23-94 (95)
161 2ctu_A Zinc finger protein 483 99.3 2.7E-13 9.3E-18 119.5 -1.1 72 805-887 2-73 (73)
162 2adr_A ADR1; transcription reg 99.3 2.1E-12 7.2E-17 109.7 4.4 57 1135-1193 1-58 (60)
163 2d9h_A Zinc finger protein 692 99.2 1E-12 3.4E-17 118.1 1.5 65 1131-1197 2-70 (78)
164 2epa_A Krueppel-like factor 10 99.2 3.3E-12 1.1E-16 112.9 4.1 64 1156-1219 9-72 (72)
165 2ctu_A Zinc finger protein 483 99.2 1.3E-12 4.6E-17 115.0 1.4 62 1127-1197 9-70 (73)
166 3n70_A Transport activator; si 99.2 1.5E-11 5.1E-16 124.5 8.9 130 355-525 2-143 (145)
167 2drp_A Protein (tramtrack DNA- 99.2 1.2E-12 4.1E-17 113.5 0.7 60 1130-1191 4-65 (66)
168 2ct1_A Transcriptional repress 99.2 4.2E-12 1.4E-16 113.8 3.9 68 1125-1194 4-74 (77)
169 2eod_A TNF receptor-associated 99.2 4.1E-12 1.4E-16 110.5 3.5 60 1159-1224 5-65 (66)
170 2epa_A Krueppel-like factor 10 99.2 5.4E-12 1.8E-16 111.4 4.0 60 1130-1189 11-72 (72)
171 3m65_A ATP-dependent protease 99.2 3.1E-11 1.1E-15 130.0 10.8 104 134-242 103-209 (209)
172 3co5_A Putative two-component 99.2 5.4E-12 1.9E-16 127.5 3.2 132 353-525 3-141 (143)
173 2eod_A TNF receptor-associated 99.2 4.5E-12 1.5E-16 110.3 1.4 61 1131-1194 5-65 (66)
174 1f2i_G Fusion of N-terminal 17 99.2 6.9E-12 2.3E-16 111.0 2.3 60 1129-1190 12-73 (73)
175 2ytn_A Zinc finger protein 347 99.2 1.1E-11 3.6E-16 99.6 3.0 45 1154-1202 2-46 (46)
176 2em0_A Zinc finger protein 224 99.2 1E-11 3.5E-16 99.6 2.8 45 1154-1202 2-46 (46)
177 2el4_A Zinc finger protein 268 99.2 9.9E-12 3.4E-16 99.7 2.7 45 1154-1202 2-46 (46)
178 2eml_A Zinc finger protein 28 99.1 1.1E-11 3.7E-16 99.5 2.5 45 1154-1202 2-46 (46)
179 2emk_A Zinc finger protein 28 99.1 9.8E-12 3.4E-16 99.9 2.1 45 1154-1202 2-46 (46)
180 2ytj_A Zinc finger protein 484 99.1 9E-12 3.1E-16 100.0 1.9 46 1153-1202 1-46 (46)
181 3f8t_A Predicted ATPase involv 99.1 9.2E-11 3.1E-15 138.2 11.2 197 346-569 206-428 (506)
182 2ema_A Zinc finger protein 347 99.1 1.1E-11 3.7E-16 99.5 2.3 45 1154-1202 2-46 (46)
183 2eq4_A Zinc finger protein 224 99.1 1.1E-11 3.8E-16 99.3 2.4 45 1154-1202 2-46 (46)
184 2eop_A Zinc finger protein 268 99.1 1.2E-11 4.1E-16 99.2 2.5 45 1154-1202 2-46 (46)
185 1yui_A GAGA-factor; complex (D 99.1 8.2E-12 2.8E-16 104.2 1.6 52 1143-1196 3-54 (54)
186 2eoo_A ZFP-95, zinc finger pro 99.1 8.4E-12 2.9E-16 100.3 1.5 46 1153-1202 1-46 (46)
187 2ep2_A Zinc finger protein 484 99.1 1.2E-11 4.1E-16 99.3 2.3 45 1154-1202 2-46 (46)
188 2ytg_A ZFP-95, zinc finger pro 99.1 1.4E-11 4.9E-16 98.8 2.7 45 1154-1202 2-46 (46)
189 2em5_A ZFP-95, zinc finger pro 99.1 1.1E-11 3.9E-16 99.5 2.1 46 1153-1202 1-46 (46)
190 2eoe_A Zinc finger protein 347 99.1 1.2E-11 4.1E-16 99.2 2.2 45 1154-1202 2-46 (46)
191 2eme_A Zinc finger protein 473 99.1 1.3E-11 4.5E-16 98.9 2.4 46 1153-1202 1-46 (46)
192 2eq0_A Zinc finger protein 347 99.1 1.2E-11 4.3E-16 99.2 2.2 45 1154-1202 2-46 (46)
193 2emf_A Zinc finger protein 484 99.1 1.4E-11 5E-16 98.9 2.6 45 1154-1202 2-46 (46)
194 2en8_A Zinc finger protein 224 99.1 1.3E-11 4.3E-16 99.0 2.2 45 1154-1202 2-46 (46)
195 2ene_A Zinc finger protein 347 99.1 1.4E-11 4.7E-16 98.9 2.3 45 1154-1202 2-46 (46)
196 2ytr_A Zinc finger protein 347 99.1 1.5E-11 5.2E-16 98.6 2.6 45 1154-1202 2-46 (46)
197 2elz_A Zinc finger protein 224 99.1 1.9E-11 6.4E-16 98.2 3.1 45 1154-1202 2-46 (46)
198 2en1_A Zinc finger protein 224 99.1 1.4E-11 4.7E-16 98.9 2.3 46 1153-1202 1-46 (46)
199 2ep3_A Zinc finger protein 484 99.1 1.4E-11 4.6E-16 98.9 2.2 43 1154-1198 2-44 (46)
200 2yu8_A Zinc finger protein 347 99.1 1.1E-11 3.9E-16 99.4 1.7 45 1154-1202 2-46 (46)
201 2eoq_A Zinc finger protein 224 99.1 1.4E-11 4.7E-16 98.9 2.1 45 1154-1202 2-46 (46)
202 2ytk_A Zinc finger protein 347 99.1 1.2E-11 4E-16 99.3 1.8 45 1154-1202 2-46 (46)
203 1vd4_A Transcription initiatio 99.1 5.3E-12 1.8E-16 108.8 -0.4 57 1152-1215 2-58 (62)
204 2emp_A Zinc finger protein 347 99.1 1.1E-11 3.8E-16 99.5 1.5 45 1154-1202 2-46 (46)
205 2eov_A Zinc finger protein 484 99.1 1.5E-11 5.2E-16 98.6 2.3 45 1154-1202 2-46 (46)
206 2emm_A ZFP-95, zinc finger pro 99.1 1.1E-11 3.8E-16 99.4 1.5 45 1154-1202 2-46 (46)
207 2emy_A Zinc finger protein 268 99.1 1.2E-11 4.3E-16 99.2 1.8 45 1154-1202 2-46 (46)
208 2emh_A Zinc finger protein 484 99.1 1.1E-11 3.6E-16 99.6 1.3 45 1154-1202 2-46 (46)
209 2em9_A Zinc finger protein 224 99.1 1.7E-11 5.9E-16 98.2 2.5 45 1154-1202 2-46 (46)
210 2ely_A Zinc finger protein 224 99.1 1.6E-11 5.6E-16 98.5 2.3 45 1154-1202 2-46 (46)
211 2epz_A Zinc finger protein 28 99.1 1.8E-11 6.2E-16 98.2 2.5 45 1154-1202 2-46 (46)
212 2ytd_A Zinc finger protein 473 99.1 1.4E-11 4.7E-16 98.9 1.8 45 1154-1202 2-46 (46)
213 2emx_A Zinc finger protein 268 99.1 1.4E-11 4.9E-16 97.8 1.8 44 1155-1202 1-44 (44)
214 2epw_A Zinc finger protein 268 99.1 1.6E-11 5.6E-16 98.4 2.1 45 1154-1202 2-46 (46)
215 2ytq_A Zinc finger protein 268 99.1 2E-11 6.7E-16 98.1 2.5 45 1154-1202 2-46 (46)
216 2el6_A Zinc finger protein 268 99.1 2E-11 6.8E-16 98.0 2.4 45 1154-1202 2-46 (46)
217 2ytb_A Zinc finger protein 32; 99.1 2.4E-11 8.2E-16 95.3 2.8 42 1154-1197 1-42 (42)
218 2em7_A Zinc finger protein 224 99.1 1.9E-11 6.6E-16 98.0 2.3 45 1154-1202 2-46 (46)
219 2el5_A Zinc finger protein 268 99.1 2.1E-11 7.3E-16 95.7 2.5 41 1155-1197 1-41 (42)
220 2en6_A Zinc finger protein 268 99.1 1.6E-11 5.3E-16 98.6 1.4 45 1154-1202 2-46 (46)
221 2eq2_A Zinc finger protein 347 99.1 3E-11 1E-15 96.9 2.9 43 1154-1198 2-44 (46)
222 2ytm_A Zinc finger protein 28 99.1 2.3E-11 7.7E-16 97.8 1.9 45 1154-1202 2-46 (46)
223 2ysp_A Zinc finger protein 224 99.1 2.4E-11 8.1E-16 97.5 2.0 45 1154-1202 2-46 (46)
224 2yth_A Zinc finger protein 224 99.1 3.1E-11 1.1E-15 96.9 2.7 43 1154-1198 2-44 (46)
225 2enc_A Zinc finger protein 224 99.1 2.4E-11 8.1E-16 97.5 1.9 45 1154-1202 2-46 (46)
226 2enf_A Zinc finger protein 347 99.1 3E-11 1E-15 96.9 2.6 43 1154-1198 2-44 (46)
227 2en7_A Zinc finger protein 268 99.1 3E-11 1E-15 95.8 2.4 42 1154-1197 2-43 (44)
228 2yso_A ZFP-95, zinc finger pro 99.1 2.5E-11 8.4E-16 97.4 1.8 45 1154-1202 2-46 (46)
229 2ytp_A Zinc finger protein 484 99.1 2.8E-11 9.7E-16 97.1 2.1 43 1154-1198 2-44 (46)
230 2em3_A Zinc finger protein 28 99.1 2.6E-11 8.7E-16 97.3 1.8 44 1153-1198 1-44 (46)
231 2ep1_A Zinc finger protein 484 99.1 3.4E-11 1.2E-15 96.5 2.5 43 1154-1198 2-44 (46)
232 2yu5_A Zinc finger protein 473 99.1 2.8E-11 9.6E-16 96.1 2.0 42 1154-1197 2-43 (44)
233 2yte_A Zinc finger protein 473 99.1 3.4E-11 1.2E-15 94.4 2.3 41 1155-1197 1-41 (42)
234 2em6_A Zinc finger protein 224 99.1 3.5E-11 1.2E-15 96.6 2.4 43 1154-1198 2-44 (46)
235 2em8_A Zinc finger protein 224 99.1 2.9E-11 9.9E-16 97.1 1.6 45 1154-1202 2-46 (46)
236 2em4_A Zinc finger protein 28 99.1 3.3E-11 1.1E-15 96.7 1.8 43 1154-1198 2-44 (46)
237 4akg_A Glutathione S-transfera 99.1 1.6E-10 5.4E-15 161.4 9.8 196 381-586 1267-1487(2695)
238 2eos_A B-cell lymphoma 6 prote 99.1 4E-11 1.4E-15 94.2 2.2 41 1155-1197 2-42 (42)
239 2yts_A Zinc finger protein 484 99.1 4.4E-11 1.5E-15 95.9 2.5 43 1154-1198 2-44 (46)
240 2epx_A Zinc finger protein 28 99.1 4.3E-11 1.5E-15 96.3 2.4 45 1154-1202 2-47 (47)
241 2eq1_A Zinc finger protein 347 99.1 3.8E-11 1.3E-15 96.3 2.1 43 1154-1198 2-44 (46)
242 2yti_A Zinc finger protein 347 99.1 3.6E-11 1.2E-15 96.4 2.0 43 1154-1198 2-44 (46)
243 2eow_A Zinc finger protein 347 99.1 3E-11 1E-15 96.8 1.5 43 1154-1198 2-44 (46)
244 2eof_A Zinc finger protein 268 99.1 3.4E-11 1.2E-15 95.4 1.8 42 1154-1197 2-43 (44)
245 2em2_A Zinc finger protein 28 99.1 3.4E-11 1.2E-15 96.7 1.8 43 1154-1198 2-44 (46)
246 2emj_A Zinc finger protein 28 99.1 3E-11 1E-15 97.0 1.4 43 1154-1198 2-44 (46)
247 2ytf_A Zinc finger protein 268 99.1 3.8E-11 1.3E-15 96.2 2.0 43 1154-1198 2-44 (46)
248 2emb_A Zinc finger protein 473 99.1 4E-11 1.4E-15 95.2 2.1 43 1153-1197 1-43 (44)
249 2en2_A B-cell lymphoma 6 prote 99.1 3.2E-11 1.1E-15 94.7 1.5 41 1155-1197 2-42 (42)
250 2eoj_A Zinc finger protein 268 99.1 4E-11 1.4E-15 95.1 2.1 42 1154-1197 2-43 (44)
251 2emi_A Zinc finger protein 484 99.0 4.5E-11 1.5E-15 95.9 2.4 43 1154-1198 2-44 (46)
252 2eoh_A Zinc finger protein 28 99.0 3.9E-11 1.3E-15 96.3 2.0 43 1154-1198 2-44 (46)
253 1x6f_A Zinc finger protein 462 99.0 6.3E-12 2.2E-16 116.5 -3.1 60 1154-1221 15-74 (88)
254 2yrj_A Zinc finger protein 473 99.0 4.2E-11 1.4E-15 96.0 2.1 43 1154-1198 2-44 (46)
255 2eoz_A Zinc finger protein 473 99.0 3E-11 1E-15 97.0 1.3 43 1154-1198 2-44 (46)
256 2emg_A Zinc finger protein 484 99.0 4.9E-11 1.7E-15 95.6 2.4 43 1154-1198 2-44 (46)
257 2yto_A Zinc finger protein 484 99.0 3E-11 1E-15 97.0 1.1 43 1154-1198 2-44 (46)
258 2eon_A ZFP-95, zinc finger pro 99.0 5E-11 1.7E-15 95.8 2.4 43 1154-1198 2-44 (46)
259 2eox_A Zinc finger protein 473 99.0 3.3E-11 1.1E-15 95.7 1.2 43 1153-1197 1-43 (44)
260 1ny5_A Transcriptional regulat 99.0 2.5E-09 8.4E-14 126.0 17.7 203 382-611 161-384 (387)
261 2en9_A Zinc finger protein 28 99.0 4.5E-11 1.5E-15 95.9 2.0 43 1154-1198 2-44 (46)
262 2enh_A Zinc finger protein 28 99.0 6.7E-11 2.3E-15 94.9 3.0 43 1154-1198 2-44 (46)
263 2epc_A Zinc finger protein 32; 99.0 5.2E-11 1.8E-15 93.4 2.0 41 1155-1197 2-42 (42)
264 2eq3_A Zinc finger protein 347 99.0 5.2E-11 1.8E-15 95.4 2.0 43 1154-1198 2-44 (46)
265 2eor_A Zinc finger protein 224 99.0 4.1E-11 1.4E-15 96.0 1.2 43 1154-1198 2-44 (46)
266 2emz_A ZFP-95, zinc finger pro 99.0 4.1E-11 1.4E-15 96.2 1.0 43 1154-1198 2-44 (46)
267 2d9k_A FLN29 gene product; zin 99.0 4.3E-11 1.5E-15 107.4 1.2 69 1149-1224 2-70 (75)
268 3dzd_A Transcriptional regulat 99.0 2E-09 6.8E-14 125.8 15.5 209 355-585 130-358 (368)
269 2epv_A Zinc finger protein 268 99.0 8.1E-11 2.8E-15 93.6 2.4 42 1154-1197 2-43 (44)
270 2en3_A ZFP-95, zinc finger pro 99.0 4E-11 1.4E-15 96.2 0.7 43 1154-1198 2-44 (46)
271 2eoy_A Zinc finger protein 473 99.0 8.8E-11 3E-15 94.2 2.0 43 1154-1198 2-45 (46)
272 2eps_A POZ-, at HOOK-, and zin 99.0 1.1E-10 3.8E-15 97.3 2.7 47 1158-1208 6-53 (54)
273 1yui_A GAGA-factor; complex (D 99.0 1E-10 3.5E-15 97.5 2.4 51 1173-1225 3-53 (54)
274 2ep0_A Zinc finger protein 28 99.0 1.1E-10 3.9E-15 93.5 2.2 44 1155-1202 3-46 (46)
275 2eou_A Zinc finger protein 473 99.0 1.2E-10 4.1E-15 92.5 1.9 42 1154-1197 2-43 (44)
276 2eps_A POZ-, at HOOK-, and zin 99.0 1.8E-10 6.2E-15 96.0 2.9 49 1129-1179 5-54 (54)
277 2ej4_A Zinc finger protein ZIC 99.0 6.2E-10 2.1E-14 103.3 6.4 60 822-885 26-94 (95)
278 2ent_A Krueppel-like factor 15 99.0 1.8E-10 6E-15 93.1 2.2 47 1154-1202 2-48 (48)
279 2ytt_A Zinc finger protein 473 98.9 1.6E-10 5.6E-15 92.6 1.2 44 1155-1202 3-46 (46)
280 2epu_A Zinc finger protein 32; 98.9 2.2E-10 7.6E-15 91.4 1.9 42 1155-1198 3-44 (45)
281 2eom_A ZFP-95, zinc finger pro 98.9 2.6E-10 9.1E-15 91.5 1.7 42 1155-1198 3-44 (46)
282 2ept_A Zinc finger protein 32; 98.9 3.9E-10 1.4E-14 87.9 2.4 39 1157-1197 3-41 (41)
283 1w5s_A Origin recognition comp 98.9 6.9E-09 2.4E-13 122.1 13.7 211 354-583 22-268 (412)
284 2epr_A POZ-, at HOOK-, and zin 98.9 4.7E-10 1.6E-14 91.0 2.4 42 1159-1204 7-48 (48)
285 2epq_A POZ-, at HOOK-, and zin 98.9 3.8E-10 1.3E-14 90.0 1.8 43 1157-1203 3-45 (45)
286 1x3c_A Zinc finger protein 292 98.9 4.9E-10 1.7E-14 97.3 2.4 41 1158-1198 21-62 (73)
287 1x6f_A Zinc finger protein 462 98.9 1.3E-10 4.6E-15 107.5 -1.3 63 1129-1197 18-87 (88)
288 2eon_A ZFP-95, zinc finger pro 98.9 1E-09 3.5E-14 88.0 3.9 43 1127-1169 3-45 (46)
289 2el4_A Zinc finger protein 268 98.9 1E-09 3.5E-14 87.7 3.4 44 811-856 2-45 (46)
290 2ytj_A Zinc finger protein 484 98.8 1.1E-09 3.6E-14 87.8 3.3 44 811-856 2-45 (46)
291 3ec2_A DNA replication protein 98.8 1.5E-09 5.2E-14 113.3 5.4 91 358-460 18-112 (180)
292 2ytn_A Zinc finger protein 347 98.8 1.2E-09 4E-14 87.5 3.4 44 811-856 2-45 (46)
293 2ema_A Zinc finger protein 347 98.8 1.2E-09 4.1E-14 87.4 3.5 44 811-856 2-45 (46)
294 2emm_A ZFP-95, zinc finger pro 98.8 1.2E-09 4E-14 87.4 3.4 44 811-856 2-45 (46)
295 2em0_A Zinc finger protein 224 98.8 1.1E-09 3.8E-14 87.6 3.3 44 811-856 2-45 (46)
296 2eoo_A ZFP-95, zinc finger pro 98.8 9.3E-10 3.2E-14 88.2 2.8 44 811-856 2-45 (46)
297 2eoe_A Zinc finger protein 347 98.8 1.2E-09 4.1E-14 87.3 3.5 44 811-856 2-45 (46)
298 2eq4_A Zinc finger protein 224 98.8 1.2E-09 4E-14 87.4 3.3 44 811-856 2-45 (46)
299 2epr_A POZ-, at HOOK-, and zin 98.8 7.9E-10 2.7E-14 89.6 2.4 43 1130-1174 6-48 (48)
300 2emk_A Zinc finger protein 28 98.8 1.2E-09 4.1E-14 87.5 3.3 44 811-856 2-45 (46)
301 2eml_A Zinc finger protein 28 98.8 1.3E-09 4.5E-14 87.2 3.6 44 811-856 2-45 (46)
302 2emp_A Zinc finger protein 347 98.8 1.2E-09 4E-14 87.5 3.2 44 811-856 2-45 (46)
303 2enh_A Zinc finger protein 28 98.8 1.7E-09 5.7E-14 86.7 4.0 42 1127-1168 3-44 (46)
304 2emx_A Zinc finger protein 268 98.8 1.4E-09 4.9E-14 86.1 3.5 43 812-856 1-43 (44)
305 2eq0_A Zinc finger protein 347 98.8 1.3E-09 4.5E-14 87.2 3.3 44 811-856 2-45 (46)
306 2yrm_A B-cell lymphoma 6 prote 98.8 7.2E-10 2.5E-14 87.6 1.7 40 1157-1198 3-42 (43)
307 2emh_A Zinc finger protein 484 98.8 1.2E-09 4E-14 87.5 3.0 44 811-856 2-45 (46)
308 2ytk_A Zinc finger protein 347 98.8 1.3E-09 4.3E-14 87.3 3.2 44 811-856 2-45 (46)
309 2ep2_A Zinc finger protein 484 98.8 1.4E-09 4.6E-14 87.1 3.3 44 811-856 2-45 (46)
310 2emy_A Zinc finger protein 268 98.8 1.3E-09 4.6E-14 87.1 3.2 44 811-856 2-45 (46)
311 2ytt_A Zinc finger protein 473 98.8 9.6E-10 3.3E-14 88.1 2.4 43 1128-1172 4-46 (46)
312 2eop_A Zinc finger protein 268 98.8 1.4E-09 4.7E-14 87.0 3.2 44 811-856 2-45 (46)
313 2en8_A Zinc finger protein 224 98.8 1.4E-09 4.9E-14 86.9 3.3 44 811-856 2-45 (46)
314 2eme_A Zinc finger protein 473 98.8 1.5E-09 5.1E-14 86.8 3.4 44 811-856 2-45 (46)
315 2ep3_A Zinc finger protein 484 98.8 1.4E-09 4.9E-14 86.9 3.3 44 811-856 2-45 (46)
316 2ene_A Zinc finger protein 347 98.8 1.5E-09 5.1E-14 86.9 3.4 44 811-856 2-45 (46)
317 2eoq_A Zinc finger protein 224 98.8 1.3E-09 4.5E-14 87.2 3.1 44 811-856 2-45 (46)
318 2ely_A Zinc finger protein 224 98.8 1.7E-09 5.8E-14 86.6 3.7 43 812-856 3-45 (46)
319 2eos_A B-cell lymphoma 6 prote 98.8 1.6E-09 5.4E-14 84.9 3.4 41 1127-1167 2-42 (42)
320 2yu8_A Zinc finger protein 347 98.8 1.2E-09 4.1E-14 87.4 2.8 44 811-856 2-45 (46)
321 2ytd_A Zinc finger protein 473 98.8 1.6E-09 5.4E-14 86.7 3.4 44 811-856 2-45 (46)
322 2emf_A Zinc finger protein 484 98.8 1.7E-09 5.7E-14 86.6 3.5 44 811-856 2-45 (46)
323 2epv_A Zinc finger protein 268 98.8 1.8E-09 6.2E-14 85.6 3.7 42 1184-1227 2-43 (44)
324 2eov_A Zinc finger protein 484 98.8 1.6E-09 5.5E-14 86.6 3.4 44 811-856 2-45 (46)
325 2em5_A ZFP-95, zinc finger pro 98.8 1.6E-09 5.3E-14 86.8 3.3 44 811-856 2-45 (46)
326 2em7_A Zinc finger protein 224 98.8 1.9E-09 6.4E-14 86.3 3.8 43 812-856 3-45 (46)
327 2epw_A Zinc finger protein 268 98.8 1.7E-09 5.8E-14 86.4 3.4 44 811-856 2-45 (46)
328 2epz_A Zinc finger protein 28 98.8 1.9E-09 6.3E-14 86.3 3.5 43 812-856 3-45 (46)
329 2en2_A B-cell lymphoma 6 prote 98.8 1.6E-09 5.6E-14 84.7 3.1 42 1184-1227 1-42 (42)
330 2en1_A Zinc finger protein 224 98.8 1.9E-09 6.5E-14 86.3 3.6 44 811-856 2-45 (46)
331 2ytq_A Zinc finger protein 268 98.8 2E-09 6.8E-14 86.2 3.7 43 812-856 3-45 (46)
332 2eoz_A Zinc finger protein 473 98.8 1.9E-09 6.7E-14 86.3 3.6 43 1184-1228 2-44 (46)
333 2eom_A ZFP-95, zinc finger pro 98.8 1.7E-09 5.8E-14 86.7 3.2 42 1128-1169 4-45 (46)
334 2em9_A Zinc finger protein 224 98.8 1.9E-09 6.6E-14 86.1 3.5 44 811-856 2-45 (46)
335 2elz_A Zinc finger protein 224 98.8 2.1E-09 7.3E-14 86.0 3.8 43 812-856 3-45 (46)
336 2ytr_A Zinc finger protein 347 98.8 1.6E-09 5.6E-14 86.5 3.0 43 811-855 2-44 (46)
337 2en6_A Zinc finger protein 268 98.8 1.7E-09 5.8E-14 86.5 3.1 44 811-856 2-45 (46)
338 1zbo_A Hypothetical protein BP 98.8 4.2E-09 1.5E-13 113.4 7.1 106 123-239 87-204 (210)
339 2el6_A Zinc finger protein 268 98.8 2.2E-09 7.7E-14 85.9 3.6 44 811-856 2-45 (46)
340 2epu_A Zinc finger protein 32; 98.8 1.2E-09 4E-14 87.2 1.9 41 1128-1168 4-44 (45)
341 2enc_A Zinc finger protein 224 98.8 2.3E-09 7.9E-14 85.7 3.7 44 811-856 2-45 (46)
342 2eox_A Zinc finger protein 473 98.8 1.5E-09 5.1E-14 86.0 2.5 43 1183-1227 1-43 (44)
343 2ytg_A ZFP-95, zinc finger pro 98.8 1.5E-09 5.3E-14 86.8 2.5 43 811-855 2-44 (46)
344 2ysp_A Zinc finger protein 224 98.8 2.3E-09 8E-14 85.7 3.3 44 811-856 2-45 (46)
345 2ytm_A Zinc finger protein 28 98.8 2.2E-09 7.4E-14 86.1 3.1 43 812-856 3-45 (46)
346 2yso_A ZFP-95, zinc finger pro 98.8 2.6E-09 9E-14 85.4 3.5 44 811-856 2-45 (46)
347 2epc_A Zinc finger protein 32; 98.8 2.9E-09 9.8E-14 83.2 3.7 41 1185-1227 2-42 (42)
348 2epq_A POZ-, at HOOK-, and zin 98.8 1.3E-09 4.4E-14 86.9 1.6 42 1130-1173 4-45 (45)
349 2el5_A Zinc finger protein 268 98.8 3.1E-09 1E-13 83.2 3.7 41 812-854 1-41 (42)
350 2emj_A Zinc finger protein 28 98.8 2.8E-09 9.4E-14 85.4 3.3 44 811-856 2-45 (46)
351 2en3_A ZFP-95, zinc finger pro 98.8 1.9E-09 6.5E-14 86.2 2.4 43 1184-1228 2-44 (46)
352 2yrm_A B-cell lymphoma 6 prote 98.8 2.2E-09 7.4E-14 84.8 2.6 40 1129-1168 3-42 (43)
353 2eow_A Zinc finger protein 347 98.8 2.7E-09 9.3E-14 85.2 3.2 44 811-856 2-45 (46)
354 2ytp_A Zinc finger protein 484 98.8 2.9E-09 9.8E-14 85.3 3.3 43 811-855 2-44 (46)
355 2em2_A Zinc finger protein 28 98.8 3.3E-09 1.1E-13 84.9 3.7 44 811-856 2-45 (46)
356 2em8_A Zinc finger protein 224 98.8 2.9E-09 1E-13 85.2 3.3 43 812-856 3-45 (46)
357 2enf_A Zinc finger protein 347 98.8 2.9E-09 9.9E-14 85.2 3.2 43 811-855 2-44 (46)
358 2em4_A Zinc finger protein 28 98.8 3.1E-09 1.1E-13 85.0 3.4 44 811-856 2-45 (46)
359 1u0j_A DNA replication protein 98.8 2.9E-08 9.8E-13 109.9 12.3 170 327-536 58-248 (267)
360 1tue_A Replication protein E1; 98.8 1.5E-08 5.1E-13 107.5 9.5 115 377-526 54-179 (212)
361 2em3_A Zinc finger protein 28 98.8 3.2E-09 1.1E-13 84.9 3.3 43 811-855 2-44 (46)
362 2ep1_A Zinc finger protein 484 98.8 3.3E-09 1.1E-13 84.7 3.3 43 811-855 2-44 (46)
363 2yth_A Zinc finger protein 224 98.8 3.5E-09 1.2E-13 84.8 3.5 43 811-855 2-44 (46)
364 2eq2_A Zinc finger protein 347 98.8 3.1E-09 1.1E-13 84.9 3.2 43 811-855 2-44 (46)
365 2yts_A Zinc finger protein 484 98.8 3.4E-09 1.2E-13 84.7 3.4 43 811-855 2-44 (46)
366 1vd4_A Transcription initiatio 98.8 1E-09 3.4E-14 94.4 0.2 57 809-872 2-58 (62)
367 2yti_A Zinc finger protein 347 98.7 3.2E-09 1.1E-13 84.9 3.0 43 811-855 2-44 (46)
368 2ept_A Zinc finger protein 32; 98.7 2.8E-09 9.7E-14 83.0 2.6 39 1129-1167 3-41 (41)
369 2yu5_A Zinc finger protein 473 98.7 3.8E-09 1.3E-13 83.6 3.4 43 811-855 2-44 (44)
370 2ytf_A Zinc finger protein 268 98.7 3.6E-09 1.2E-13 84.5 3.3 43 811-855 2-44 (46)
371 2eof_A Zinc finger protein 268 98.7 3.8E-09 1.3E-13 83.5 3.3 43 811-855 2-44 (44)
372 2kjq_A DNAA-related protein; s 98.7 2.3E-08 8E-13 101.7 10.0 101 380-520 35-141 (149)
373 2yrj_A Zinc finger protein 473 98.7 3.8E-09 1.3E-13 84.4 3.3 43 811-855 2-44 (46)
374 2yto_A Zinc finger protein 484 98.7 3.6E-09 1.2E-13 84.7 3.1 43 811-855 2-44 (46)
375 2yte_A Zinc finger protein 473 98.7 4.1E-09 1.4E-13 82.4 3.4 41 812-854 1-41 (42)
376 2emg_A Zinc finger protein 484 98.7 4.1E-09 1.4E-13 84.3 3.4 43 811-855 2-44 (46)
377 2en7_A Zinc finger protein 268 98.7 3.4E-09 1.1E-13 83.7 2.9 42 811-854 2-43 (44)
378 2eor_A Zinc finger protein 224 98.7 3.8E-09 1.3E-13 84.3 3.2 44 811-856 2-45 (46)
379 2en9_A Zinc finger protein 28 98.7 3.7E-09 1.3E-13 84.6 3.1 44 811-856 2-45 (46)
380 2epx_A Zinc finger protein 28 98.7 4.3E-09 1.5E-13 84.3 3.5 43 812-856 3-46 (47)
381 2emb_A Zinc finger protein 473 98.7 3.8E-09 1.3E-13 83.6 3.2 43 811-855 2-44 (44)
382 2em6_A Zinc finger protein 224 98.7 4E-09 1.4E-13 84.4 3.1 43 811-855 2-44 (46)
383 2ytb_A Zinc finger protein 32; 98.7 2.8E-09 9.7E-14 83.3 2.2 41 812-854 2-42 (42)
384 2emi_A Zinc finger protein 484 98.7 5.2E-09 1.8E-13 83.6 3.7 43 811-855 2-44 (46)
385 2eoh_A Zinc finger protein 28 98.7 4.7E-09 1.6E-13 84.0 3.3 43 811-855 2-44 (46)
386 2eq1_A Zinc finger protein 347 98.7 4.2E-09 1.4E-13 84.2 2.9 43 811-855 2-44 (46)
387 2eoj_A Zinc finger protein 268 98.7 4.6E-09 1.6E-13 83.0 3.0 43 811-855 2-44 (44)
388 2eq3_A Zinc finger protein 347 98.7 5.3E-09 1.8E-13 83.5 2.9 43 811-855 2-44 (46)
389 1p7a_A BF3, BKLF, kruppel-like 98.7 6.1E-09 2.1E-13 79.0 2.8 35 1155-1191 2-36 (37)
390 2emz_A ZFP-95, zinc finger pro 98.7 4.7E-09 1.6E-13 84.0 2.1 43 811-855 2-44 (46)
391 1p7a_A BF3, BKLF, kruppel-like 98.7 6.5E-09 2.2E-13 78.8 2.8 37 1184-1222 1-37 (37)
392 2elo_A Zinc finger protein 406 98.7 4.3E-09 1.5E-13 79.9 1.7 36 1157-1194 2-37 (37)
393 2eoy_A Zinc finger protein 473 98.7 8E-09 2.7E-13 82.6 3.4 43 811-855 2-45 (46)
394 1ncs_A Peptide M30F, transcrip 98.7 4.4E-09 1.5E-13 84.9 1.6 39 1184-1222 8-46 (47)
395 3vkg_A Dynein heavy chain, cyt 98.7 6.3E-08 2.2E-12 136.2 13.9 270 293-587 1220-1526(3245)
396 2ep0_A Zinc finger protein 28 98.7 9.7E-09 3.3E-13 82.1 3.5 43 812-856 3-45 (46)
397 2eou_A Zinc finger protein 473 98.7 9.1E-09 3.1E-13 81.5 3.1 42 812-855 3-44 (44)
398 2eln_A Zinc finger protein 406 98.7 6E-09 2E-13 80.7 2.0 34 1189-1222 4-37 (38)
399 1njq_A Superman protein; zinc- 98.7 4.4E-09 1.5E-13 81.0 1.1 37 1159-1197 1-37 (39)
400 2eln_A Zinc finger protein 406 98.6 1.5E-08 5.1E-13 78.4 3.4 36 1158-1193 3-38 (38)
401 2w58_A DNAI, primosome compone 98.6 1.7E-08 5.7E-13 107.3 4.7 91 359-460 34-127 (202)
402 1bhi_A CRE-BP1, ATF-2; CRE bin 98.6 7.6E-09 2.6E-13 79.0 1.1 37 1159-1195 1-37 (38)
403 2ent_A Krueppel-like factor 15 98.6 1.9E-08 6.6E-13 80.9 3.6 42 812-855 3-46 (48)
404 4akg_A Glutathione S-transfera 98.6 1.3E-07 4.5E-12 132.4 14.1 135 381-535 645-789 (2695)
405 2elo_A Zinc finger protein 406 98.6 1.9E-08 6.4E-13 76.3 3.1 36 1186-1223 1-36 (37)
406 1ncs_A Peptide M30F, transcrip 98.6 1.5E-08 5.2E-13 81.7 2.6 44 1150-1193 4-47 (47)
407 1njq_A Superman protein; zinc- 98.6 1.3E-08 4.5E-13 78.3 1.6 37 1131-1167 1-37 (39)
408 1srk_A Zinc finger protein ZFP 98.6 2.4E-08 8.2E-13 74.6 2.6 34 1159-1194 2-35 (35)
409 2elx_A Zinc finger protein 406 98.5 2.1E-08 7.2E-13 74.8 2.1 32 1189-1222 2-33 (35)
410 2fna_A Conserved hypothetical 98.5 4.4E-07 1.5E-11 104.0 13.6 160 354-539 13-222 (357)
411 1x3c_A Zinc finger protein 292 98.5 3E-08 1E-12 86.2 2.6 39 1130-1168 21-62 (73)
412 2elm_A Zinc finger protein 406 98.5 3.8E-08 1.3E-12 74.9 3.0 35 1186-1222 1-36 (37)
413 1rim_A E6APC2 peptide; E6-bind 98.5 3.2E-08 1.1E-12 73.4 1.9 30 1136-1165 2-31 (33)
414 2elx_A Zinc finger protein 406 98.5 7.3E-08 2.5E-12 71.8 3.4 35 1158-1194 1-35 (35)
415 2d9k_A FLN29 gene product; zin 98.5 2.4E-08 8.4E-13 89.3 0.6 65 808-879 4-68 (75)
416 1srk_A Zinc finger protein ZFP 98.5 9E-08 3.1E-12 71.4 3.6 35 1188-1224 1-35 (35)
417 2elp_A Zinc finger protein 406 98.4 8.7E-08 3E-12 72.6 2.9 34 1187-1222 2-36 (37)
418 2kfq_A FP1; protein, de novo p 98.4 4E-08 1.4E-12 72.3 0.8 30 1136-1165 2-31 (32)
419 2elm_A Zinc finger protein 406 98.4 5.4E-08 1.9E-12 74.0 1.6 35 1156-1192 1-36 (37)
420 2elp_A Zinc finger protein 406 98.4 5.4E-08 1.9E-12 73.7 1.6 35 1157-1193 2-37 (37)
421 1jr3_D DNA polymerase III, del 98.4 5.6E-07 1.9E-11 103.8 10.8 179 380-613 17-208 (343)
422 2elv_A Zinc finger protein 406 98.4 7.7E-08 2.6E-12 72.4 2.3 33 1188-1222 3-35 (36)
423 1va1_A Transcription factor SP 98.4 5.8E-08 2E-12 73.9 1.6 34 1189-1222 3-36 (37)
424 2elv_A Zinc finger protein 406 98.4 1.2E-07 4E-12 71.4 3.1 35 1157-1193 2-36 (36)
425 2qgz_A Helicase loader, putati 98.4 2.3E-07 7.8E-12 105.7 6.6 89 360-460 134-226 (308)
426 2elq_A Zinc finger protein 406 98.4 1.7E-07 5.7E-12 70.5 3.3 33 1188-1222 3-35 (36)
427 2elt_A Zinc finger protein 406 98.4 1.6E-07 5.6E-12 70.4 3.3 33 1188-1222 3-35 (36)
428 1rim_A E6APC2 peptide; E6-bind 98.4 7.5E-08 2.6E-12 71.4 1.3 33 1163-1197 1-33 (33)
429 2elq_A Zinc finger protein 406 98.4 1E-07 3.4E-12 71.7 2.0 35 1157-1193 2-36 (36)
430 1bhi_A CRE-BP1, ATF-2; CRE bin 98.3 1.9E-07 6.4E-12 71.1 3.1 37 1189-1225 1-37 (38)
431 2elt_A Zinc finger protein 406 98.3 1.3E-07 4.4E-12 71.0 1.8 35 1157-1193 2-36 (36)
432 2qen_A Walker-type ATPase; unk 98.3 1.6E-06 5.4E-11 99.2 11.6 162 354-538 12-215 (350)
433 1va1_A Transcription factor SP 98.3 2.6E-07 8.8E-12 70.2 2.9 36 1158-1193 2-37 (37)
434 3iuf_A Zinc finger protein UBI 98.3 1.7E-07 5.7E-12 76.0 1.8 35 1158-1194 1-36 (48)
435 2elr_A Zinc finger protein 406 98.3 2.1E-07 7.1E-12 69.8 2.2 32 1189-1222 4-35 (36)
436 3cmw_A Protein RECA, recombina 98.3 1.1E-06 3.9E-11 118.2 10.7 116 348-463 1014-1175(1706)
437 1ye8_A Protein THEP1, hypothet 98.3 8.9E-07 3E-11 92.7 7.6 27 383-409 2-28 (178)
438 3iuf_A Zinc finger protein UBI 98.3 2.6E-07 9E-12 74.8 2.7 35 1188-1224 1-36 (48)
439 2r2a_A Uncharacterized protein 98.3 1E-06 3.5E-11 93.9 8.1 127 380-520 4-146 (199)
440 2kfq_A FP1; protein, de novo p 98.3 1.1E-07 3.9E-12 69.8 0.3 31 1163-1195 1-31 (32)
441 2elr_A Zinc finger protein 406 98.3 3.5E-07 1.2E-11 68.6 2.8 35 1157-1193 2-36 (36)
442 2els_A Zinc finger protein 406 98.2 5.3E-07 1.8E-11 67.7 3.2 33 1188-1222 3-35 (36)
443 2els_A Zinc finger protein 406 98.2 3.2E-07 1.1E-11 68.9 1.8 34 1158-1193 3-36 (36)
444 2vhj_A Ntpase P4, P4; non- hyd 98.2 1.5E-06 5.3E-11 98.4 7.2 76 377-462 119-196 (331)
445 1sp2_A SP1F2; zinc finger, tra 98.2 6.3E-07 2.1E-11 64.9 2.3 21 1172-1192 10-30 (31)
446 1zfd_A SWI5; DNA binding motif 98.1 1.4E-06 4.8E-11 63.4 2.5 21 1172-1192 11-31 (32)
447 3vkg_A Dynein heavy chain, cyt 98.0 2.2E-05 7.4E-10 111.1 15.4 133 382-534 605-748 (3245)
448 1fv5_A First zinc finger of U- 98.0 7.4E-07 2.5E-11 68.0 0.1 26 1159-1186 3-28 (36)
449 2epp_A POZ-, at HOOK-, and zin 98.0 2.4E-06 8.2E-11 74.4 3.2 37 1156-1194 5-41 (66)
450 2epp_A POZ-, at HOOK-, and zin 98.0 1.8E-06 6.2E-11 75.2 2.2 37 1130-1167 7-43 (66)
451 2lvt_A Zinc finger and BTB dom 97.2 8.5E-07 2.9E-11 62.9 0.0 27 1164-1192 2-28 (29)
452 1ard_A Yeast transcription fac 98.0 1.8E-06 6.1E-11 61.0 1.5 28 1163-1192 1-28 (29)
453 1klr_A Zinc finger Y-chromosom 98.0 2.1E-06 7.1E-11 61.0 1.9 28 1136-1163 2-29 (30)
454 1zfd_A SWI5; DNA binding motif 98.0 3E-06 1E-10 61.6 2.5 30 1134-1163 1-32 (32)
455 1sp2_A SP1F2; zinc finger, tra 98.0 2.6E-06 9E-11 61.5 2.1 29 1135-1163 1-31 (31)
456 2m0d_A Zinc finger and BTB dom 97.9 2.4E-06 8.3E-11 60.6 1.8 28 1193-1222 2-29 (30)
457 2lvr_A Zinc finger and BTB dom 97.2 1.2E-06 4.1E-11 62.4 0.0 28 1163-1192 2-29 (30)
458 2m0d_A Zinc finger and BTB dom 97.9 4.2E-06 1.4E-10 59.3 2.8 30 1162-1193 1-30 (30)
459 2m0e_A Zinc finger and BTB dom 97.9 2.2E-06 7.5E-11 60.3 1.2 28 1163-1192 1-28 (29)
460 1rik_A E6APC1 peptide; E6-bind 97.9 3.7E-06 1.3E-10 59.4 1.9 22 1201-1222 7-28 (29)
461 1rik_A E6APC1 peptide; E6-bind 97.9 5.8E-06 2E-10 58.3 2.9 29 1163-1193 1-29 (29)
462 1svm_A Large T antigen; AAA+ f 97.9 1.5E-05 5E-10 93.1 7.9 66 377-462 165-230 (377)
463 2lvr_A Zinc finger and BTB dom 97.1 1.7E-06 5.9E-11 61.6 0.0 28 1193-1222 2-29 (30)
464 1paa_A Yeast transcription fac 97.9 4.9E-06 1.7E-10 59.2 2.4 27 1164-1192 2-29 (30)
465 1znf_A 31ST zinc finger from X 97.9 4.1E-06 1.4E-10 58.1 1.9 26 1164-1191 1-26 (27)
466 2lvt_A Zinc finger and BTB dom 97.1 2.2E-06 7.5E-11 60.8 0.0 27 1136-1162 2-28 (29)
467 1ard_A Yeast transcription fac 97.8 4.7E-06 1.6E-10 58.7 1.7 28 1193-1222 1-28 (29)
468 2kvf_A Zinc finger and BTB dom 97.8 7.4E-06 2.5E-10 57.4 2.6 27 1193-1221 2-28 (28)
469 1fv5_A First zinc finger of U- 97.8 8.4E-06 2.9E-10 62.1 3.0 33 1188-1222 2-34 (36)
470 2kvg_A Zinc finger and BTB dom 97.8 8E-06 2.7E-10 57.1 2.5 27 1192-1220 1-27 (27)
471 1klr_A Zinc finger Y-chromosom 97.8 5.7E-06 2E-10 58.6 1.7 29 1163-1193 1-29 (30)
472 2kvf_A Zinc finger and BTB dom 97.8 6E-06 2E-10 57.9 1.6 28 1162-1191 1-28 (28)
473 2m0f_A Zinc finger and BTB dom 97.8 8.5E-06 2.9E-10 57.3 2.4 28 1193-1222 1-28 (29)
474 2kvh_A Zinc finger and BTB dom 97.8 1E-05 3.4E-10 56.4 2.7 27 1192-1220 1-27 (27)
475 2m0e_A Zinc finger and BTB dom 97.8 6E-06 2.1E-10 58.0 1.3 28 1193-1222 1-28 (29)
476 2m0f_A Zinc finger and BTB dom 97.8 5.2E-06 1.8E-10 58.4 1.0 29 1163-1193 1-29 (29)
477 2kvg_A Zinc finger and BTB dom 97.7 6.7E-06 2.3E-10 57.5 1.2 27 1162-1190 1-27 (27)
478 2kvh_A Zinc finger and BTB dom 97.7 8.3E-06 2.9E-10 56.8 1.3 27 1162-1190 1-27 (27)
479 1znf_A 31ST zinc finger from X 97.7 1.2E-05 4.1E-10 55.7 2.0 27 1194-1222 1-27 (27)
480 1paa_A Yeast transcription fac 97.7 1.4E-05 4.7E-10 56.8 2.3 27 1136-1162 2-29 (30)
481 2lvu_A Zinc finger and BTB dom 96.9 5.7E-06 1.9E-10 57.1 0.0 25 1163-1189 1-25 (26)
482 2r8r_A Sensor protein; KDPD, P 97.6 0.00017 5.9E-09 77.8 10.2 132 383-533 8-171 (228)
483 2orw_A Thymidine kinase; TMTK, 97.6 3.4E-05 1.2E-09 81.1 4.2 25 380-404 2-26 (184)
484 2ab3_A ZNF29; zinc finger prot 97.6 3.5E-05 1.2E-09 54.1 2.9 29 1193-1221 1-29 (29)
485 2i3b_A HCR-ntpase, human cance 97.6 7.5E-05 2.6E-09 78.8 6.7 25 381-405 1-25 (189)
486 2ehv_A Hypothetical protein PH 97.5 0.00019 6.3E-09 78.0 9.5 38 377-414 26-67 (251)
487 1zw8_A Zinc-responsive transcr 97.5 5.6E-05 1.9E-09 65.3 4.2 56 1165-1220 2-64 (64)
488 2lvu_A Zinc finger and BTB dom 96.7 1.4E-05 4.6E-10 55.1 0.0 24 1194-1219 2-25 (26)
489 2ab3_A ZNF29; zinc finger prot 97.5 2.8E-05 9.5E-10 54.6 1.4 29 1163-1191 1-29 (29)
490 2px0_A Flagellar biosynthesis 97.4 0.00093 3.2E-08 75.5 13.3 137 281-456 40-190 (296)
491 1qhx_A CPT, protein (chloramph 97.4 0.00011 3.8E-09 75.8 5.1 34 381-414 3-36 (178)
492 3gfo_A Cobalt import ATP-bindi 97.3 0.00022 7.5E-09 79.7 7.2 28 379-406 32-59 (275)
493 1vma_A Cell division protein F 97.3 0.0024 8.1E-08 72.4 15.8 81 281-405 46-128 (306)
494 3fvq_A Fe(3+) IONS import ATP- 97.3 0.00017 5.9E-09 83.4 6.3 29 378-406 27-55 (359)
495 2cvh_A DNA repair and recombin 97.3 0.00038 1.3E-08 74.0 8.3 40 377-416 16-55 (220)
496 2a5y_B CED-4; apoptosis; HET: 97.3 0.019 6.6E-07 70.2 24.4 152 357-539 131-306 (549)
497 1zw8_A Zinc-responsive transcr 97.3 0.00026 8.8E-09 61.1 5.4 55 792-846 2-63 (64)
498 2w0m_A SSO2452; RECA, SSPF, un 97.2 0.00056 1.9E-08 73.1 8.5 38 377-414 19-59 (235)
499 3vaa_A Shikimate kinase, SK; s 97.2 0.00019 6.6E-09 75.8 4.5 34 379-412 23-56 (199)
500 3trf_A Shikimate kinase, SK; a 97.2 0.00019 6.6E-09 74.5 4.3 32 381-412 5-36 (185)
No 1
>3m6a_A ATP-dependent protease LA 1; alpha, beta, ATP-binding, hydrolase, nucleotide-binding, Pro serine protease, stress response; HET: ADP; 3.40A {Bacillus subtilis} PDB: 1x37_A
Probab=100.00 E-value=7.6e-82 Score=774.55 Aligned_cols=497 Identities=46% Similarity=0.792 Sum_probs=437.7
Q ss_pred CChhHHHHHHHHHHhcCCCChhHHHHHHHHHHHhccCCCCCCccchhhhHHHHhhcCCCCCcccccccHHHHhhhhcccc
Q psy8969 277 DDKDAIEEKFRERIKDKKVPPPVMEVLNEELAKLGFLESHSSEFNVTRNYLDWLTSLPWGIQSEENLDLTQAAKILDDDH 356 (1230)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~e~~v~~~yl~~~~~lpw~~~~~~~~~~~~~~~~l~~d~ 356 (1230)
++.++++++|++||++++||+++++++++|++||++|+++|+|++|+|+|+||+++|||+..+.+++|+..++++|++||
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~l~~~~~~~~e~~~~~~~l~~~~~lp~~~~~~~~~~~~~~~~~l~~di 83 (543)
T 3m6a_A 4 EGKTGEVQTLTEKIEEAGMPDHVKETALKELNRYEKIPSSSAESSVIRNYIDWLVALPWTDETDDKLDLKEAGRLLDEEH 83 (543)
T ss_dssp ---CCTTTHHHHHHHSSSCCCHHHHHHHHHHHSSCCCSSSCTTTTHHHHHHHHHHHSCSSCCCCCCCCTTTGGGTHHHHC
T ss_pred ccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhcCCCCCchHhHHHHHHHHHhcCCCCccccccccHHHHHHHHHHHh
Confidence 34455788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cChHHHHHHHHHHHHHhhhcCCCCCceEEEeCCCCCCchHHHHHHHHHhCCCeEEEecCCcchhHHHhhccccccccCch
Q psy8969 357 YGMEDVKKRILEFIAVSQLKGTTQGKILCFYGPPGVGKTSIAKSIARALNREYFRFSVGGMSDVAEIKGHRRTYVGAMPG 436 (1230)
Q Consensus 357 ~G~~~vK~~i~e~l~~~~~~~~~~~~~llL~GPPG~GKTslak~iA~~l~~~~~~~~~~~~~d~~~i~g~~~~~~g~~~g 436 (1230)
||++++|+++.+++++..+....+|+++||+||||||||+||++||..++.+|.+++++++.+..++.|+.+.|+|..++
T Consensus 84 ~G~~~vk~~i~~~~~l~~~~~~~~g~~vll~Gp~GtGKTtlar~ia~~l~~~~~~i~~~~~~~~~~~~g~~~~~ig~~~~ 163 (543)
T 3m6a_A 84 HGLEKVKERILEYLAVQKLTKSLKGPILCLAGPPGVGKTSLAKSIAKSLGRKFVRISLGGVRDESEIRGHRRTYVGAMPG 163 (543)
T ss_dssp SSCHHHHHHHHHHHHHHHHSSSCCSCEEEEESSSSSSHHHHHHHHHHHHTCEEEEECCCC--------------------
T ss_pred ccHHHHHHHHHHHHHHHHhcccCCCCEEEEECCCCCCHHHHHHHHHHhcCCCeEEEEecccchhhhhhhHHHHHhccCch
Confidence 99999999999999988888777899999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHhhcCCCCEEEEecccccCCCCCCChhhHHHhhcChhhhhhhhhhccCccccCCceEEEEecCCCCCCCHhhhc
Q psy8969 437 KVIQCMKKTKTENPLVLIDEVDKIGKGYSGDPASALLEMLDPEQNANFLDHYLDVPVDLSRVLFICTANVIDTIPEPLRD 516 (1230)
Q Consensus 437 ~i~~~~~~~~~~~pvillDEIDk~~~~~~~~~~~all~~ld~~q~~~f~d~~~~~~~d~s~v~~I~TaN~~~~I~~~L~~ 516 (1230)
.+.+.|..+...+|||||||||++..++.+++.++||++||+.|+..|.++|.+.++|+++++||+|||+++.|++||++
T Consensus 164 ~~~~~~~~a~~~~~vl~lDEid~l~~~~~~~~~~~LL~~ld~~~~~~~~~~~~~~~~~~~~v~iI~ttN~~~~l~~aL~~ 243 (543)
T 3m6a_A 164 RIIQGMKKAGKLNPVFLLDEIDKMSSDFRGDPSSAMLEVLDPEQNSSFSDHYIEETFDLSKVLFIATANNLATIPGPLRD 243 (543)
T ss_dssp CHHHHHHTTCSSSEEEEEEESSSCC---------CCGGGTCTTTTTBCCCSSSCCCCBCSSCEEEEECSSTTTSCHHHHH
T ss_pred HHHHHHHHhhccCCEEEEhhhhhhhhhhccCHHHHHHHHHhhhhcceeecccCCeeecccceEEEeccCccccCCHHHHh
Confidence 99999999999999999999999998888899999999999999999999999999999999999999999999999999
Q ss_pred ccceeecCCCCHHHHHHHHHHhhcchhHHhcCCCCCCcccCHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcC
Q psy8969 517 RMEMIDVSGYVAEEKVAIAAQYLIPQAMKESGLSPEQITLEPSAIQVLIKNYCRESGVRNLQKHIEKVTRKVALTIVKKE 596 (1230)
Q Consensus 517 R~~~i~~~~~~~~e~~~i~~~~l~~~~~~~~gl~~~~i~~~~~~~~~li~~~~~e~gvR~l~~~i~~i~r~~~~~~~~~~ 596 (1230)
||++|.++.|+.+++..|++++++++.++++|+....+.++++++..+++.|+.++|+|.|++.|+.++++++..++..+
T Consensus 244 R~~vi~~~~~~~~e~~~Il~~~l~~~~~~~~~~~~~~i~i~~~~l~~l~~~~~~~~~vR~L~~~i~~~~~~aa~~~~~~~ 323 (543)
T 3m6a_A 244 RMEIINIAGYTEIEKLEIVKDHLLPKQIKEHGLKKSNLQLRDQAILDIIRYYTREAGVRSLERQLAAICRKAAKAIVAEE 323 (543)
T ss_dssp HEEEEECCCCCHHHHHHHHHHTHHHHHHHHTTCCGGGCEECHHHHHHHHHHHCCCSSSHHHHHHHHHHHHHHHHHHHTTC
T ss_pred hcceeeeCCCCHHHHHHHHHHHHHHHHHHHcCCCcccccCCHHHHHHHHHhCChhhchhHHHHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999988877
Q ss_pred CCceEechhhhhhhcCCCcccccccccCCCCceEEeeeeeeeccC-----------CcceEEEecc--------------
Q psy8969 597 SDKVTVTNDNLSDFVGKPIFSHDRLFEITPPGVVTRKVALTIVKK-----------ESDKVTVTND-------------- 651 (1230)
Q Consensus 597 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-----------~~~~~~~~~~-------------- 651 (1230)
...+.|+.+++++++|++.+.+++......+|+++| ++|+.+++ +.+.+.+||.
T Consensus 324 ~~~~~It~~~l~~~Lg~~~~~~e~~~~~~~~g~v~g-~a~~~~~g~~~~ve~~~~~g~~~~~~~G~~~~~~~es~~~a~~ 402 (543)
T 3m6a_A 324 RKRITVTEKNLQDFIGKRIFRYGQAETEDQVGVVTG-LAYTTVGGDTLSIEVSLSPGKGKLILTGKLGDVMRESAQAAFS 402 (543)
T ss_dssp CSCCEECTTTTHHHHCSCCSCCSTTTCCCBSSEEEE-EEEETTEEEEEEEEEEEESSCSCEEEEESCCHHHHHHHHHHHH
T ss_pred CcceecCHHHHHHHhCCcccCchhhhcccccccccc-ccccCCCccceeeEEEeeCCCCceEEecCchHHHHHHHHHHHH
Confidence 777899999999999999999999888899999999 48875443 3467888762
Q ss_pred ----ccccccCCC-CcccccccccCCCcceeeeeccccCcCCCCCchhHHHHHHHHHhhhCCCCCcCceeeeeEEEeeeE
Q psy8969 652 ----NLSDFVGKP-IFSHDRLFEITPPGVVMGLAWTAMAVKKDGPSAGITITTALVSLATGKPIKQNLAMTGEISLVGKV 726 (1230)
Q Consensus 652 ----~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~pkdgpsag~~~~~a~~s~~~~~~v~~~~amtgeitl~g~v 726 (1230)
.+..++..+ .|...++|+|+|+|+ +||||||||+|||+||+|+++++||++++||||||+|+|+|
T Consensus 403 ~v~~~~~~~g~~~~~~~~~di~v~~~~g~----------~~k~gpsa~l~ia~ai~s~~~~~~~~~~~~~~GEi~L~G~v 472 (543)
T 3m6a_A 403 YVRSKTEELGIEPDFHEKYDIHIHVPEGA----------VPKDGPAAGITMATALVSALTGRAVSREVGMTGEITLRGRV 472 (543)
T ss_dssp HHTSSCGGGSSCSSCTTTCEEEEEECTTB----------CGGGGGGGHHHHHHHHHHHHTSCCBCTTCEECCEECTTCBE
T ss_pred HHHHHHHHcCCCccccCCcceEEEeCCCC----------CCCCCchhHHHHHHHHHHHccCCCCCCCEEEEEEEcCCceE
Confidence 222233333 366678999999998 99999999999999999999999999999999999999999
Q ss_pred eecCCchHHHHHHHHcCcceeecCccccccccCchhhHhhccceecccchhhhhhccc
Q psy8969 727 LPVGGIKEKTIAAKRVGVHTILMPEENKKDFTDLPEYIREGLNVHFVSEWRQVYDLVF 784 (1230)
Q Consensus 727 ~~iGG~kek~~aa~r~gi~~vi~p~~N~kDl~elPe~vr~~l~i~fvs~~~eVl~ia~ 784 (1230)
+||||+++|+++|+|+|+++||+|.+|.+++.++|..+..++++++++++.+++..++
T Consensus 473 ~~v~g~~~~~~~a~~~g~~~~iiP~~n~~~~~~~~~~~~~~~~i~~v~~l~e~~~~~~ 530 (543)
T 3m6a_A 473 LPIGGLKEKALGAHRAGLTTIIAPKDNEKDIEDIPESVREGLTFILASHLDEVLEHAL 530 (543)
T ss_dssp ECCSCHHHHHHHHHHTTCSBEEEEGGGGGGGGGSCHHHHTSCBCCEESBHHHHHHHHB
T ss_pred EeeCCHHHHHHHHHHCCCCEEEECHHHHHHHHhhHHHHhCCCEEEEeCCHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999886
No 2
>3k1j_A LON protease, ATP-dependent protease LON; ATP-binding, nucleotide-binding, Pro hydrolase; HET: ADP PE8; 2.00A {Thermococcus onnurineus}
Probab=100.00 E-value=1.2e-43 Score=441.69 Aligned_cols=425 Identities=21% Similarity=0.317 Sum_probs=285.2
Q ss_pred ccchhhhHHHHhhcCCCCCcccccccHHHHhhhhcccccChHHHHHHHHHHHHHhhhcCCCCCceEEEeCCCCCCchHHH
Q psy8969 319 EFNVTRNYLDWLTSLPWGIQSEENLDLTQAAKILDDDHYGMEDVKKRILEFIAVSQLKGTTQGKILCFYGPPGVGKTSIA 398 (1230)
Q Consensus 319 e~~v~~~yl~~~~~lpw~~~~~~~~~~~~~~~~l~~d~~G~~~vK~~i~e~l~~~~~~~~~~~~~llL~GPPG~GKTsla 398 (1230)
|....|.|+| ++.|+...+...++.... ..-+++||++.+++.|...+. .+..++|+||||||||+||
T Consensus 10 ~~~~~~~~~~---~~~~~~~~~~~~~~~~rp-~~l~~i~G~~~~l~~l~~~i~--------~g~~vll~Gp~GtGKTtla 77 (604)
T 3k1j_A 10 EALAPREYGE---SLELGIEFTTTEEIEVPE-KLIDQVIGQEHAVEVIKTAAN--------QKRHVLLIGEPGTGKSMLG 77 (604)
T ss_dssp --------CC---CCCCSSCCSBGGGSCCCS-SHHHHCCSCHHHHHHHHHHHH--------TTCCEEEECCTTSSHHHHH
T ss_pred hhcCchhhcc---ceeeeeEeeccCcccccc-cccceEECchhhHhhcccccc--------CCCEEEEEeCCCCCHHHHH
Confidence 4444555554 466665544433333222 333689999999988877763 3468999999999999999
Q ss_pred HHHHHHhCCCe-----------------EEEecCCc--------------------------------------------
Q psy8969 399 KSIARALNREY-----------------FRFSVGGM-------------------------------------------- 417 (1230)
Q Consensus 399 k~iA~~l~~~~-----------------~~~~~~~~-------------------------------------------- 417 (1230)
++||..+.... +.+...+.
T Consensus 78 r~ia~~l~~~~~~~~~~~~~~~~~~~p~i~~~p~g~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~~~nl~v~~~~~~~~ 157 (604)
T 3k1j_A 78 QAMAELLPTETLEDILVFPNPEDENMPRIKTVPACQGRRIVEKYREKAKSQESVKSSNMRLKSTVLVPKLLVDNCGRTKA 157 (604)
T ss_dssp HHHHHTSCCSSCEEEEEECCTTCTTSCEEEEEETTHHHHHHHHHHHHHHHHTCC-----------CCCEEEECCTTCSSC
T ss_pred HHHhccCCcccCCeEEEeCCcccccCCcEEEEecchHHHHHHHHHHhhccchhhhhhcccccccccccceeeccccCCCC
Confidence 99999987543 11110000
Q ss_pred -------chhHHHhhccc---ccccc---------CchhHHHHHHhhcCCCCEEEEecccccCCCCCCChhhHHHhhcCh
Q psy8969 418 -------SDVAEIKGHRR---TYVGA---------MPGKVIQCMKKTKTENPLVLIDEVDKIGKGYSGDPASALLEMLDP 478 (1230)
Q Consensus 418 -------~d~~~i~g~~~---~~~g~---------~~g~i~~~~~~~~~~~pvillDEIDk~~~~~~~~~~~all~~ld~ 478 (1230)
....++.|.-. .+.|. .+|.+. ...+.++||||||.+. ....++|+++|+.
T Consensus 158 ~~v~~~~~~~~~L~G~~~~~~~~~g~~~~g~~~~i~~g~~~------~a~~gvL~LDEi~~l~----~~~q~~Ll~~Le~ 227 (604)
T 3k1j_A 158 PFIDATGAHAGALLGDVRHDPFQSGGLGTPAHERVEPGMIH------RAHKGVLFIDEIATLS----LKMQQSLLTAMQE 227 (604)
T ss_dssp CEEECTTCCHHHHHCEECCCCC----CCCCGGGGEECCHHH------HTTTSEEEETTGGGSC----HHHHHHHHHHHHH
T ss_pred CEEEcCCCCHHhcCceEEechhhcCCccccccccccCceee------ecCCCEEEEechhhCC----HHHHHHHHHHHHc
Confidence 00111111110 00010 122221 2345699999999973 3456788888864
Q ss_pred hhhhhhhhh-------cc-CccccCCceEEEEecCCC--CCCCHhhhcccce----eecCC---CCHHHHHHHHHHhhcc
Q psy8969 479 EQNANFLDH-------YL-DVPVDLSRVLFICTANVI--DTIPEPLRDRMEM----IDVSG---YVAEEKVAIAAQYLIP 541 (1230)
Q Consensus 479 ~q~~~f~d~-------~~-~~~~d~s~v~~I~TaN~~--~~I~~~L~~R~~~----i~~~~---~~~~e~~~i~~~~l~~ 541 (1230)
.+... ... .+ ..++. .++.+|+|+|+. +.++++|++||.+ +.+.. .+.++...++. ++ .
T Consensus 228 ~~~~~-~g~~~~~~~~~l~~~~~p-~~~~vI~atn~~~~~~l~~~l~~R~~v~~i~i~l~~~~~~~~~~~~~~l~-~~-~ 303 (604)
T 3k1j_A 228 KKFPI-TGQSEMSSGAMVRTEPVP-CDFVLVAAGNLDTVDKMHPALRSRIRGYGYEVYMRTTMPDTIENRRKLVQ-FV-A 303 (604)
T ss_dssp SEECC-BCSCTTSGGGGCBCSCEE-CCCEEEEEECHHHHHHSCHHHHHHHHHHSEEEECCSEEECCHHHHHHHHH-HH-H
T ss_pred CcEEe-cccccccccccCCCCccc-eeEEEEEecCHHHHhhcCHHHHHHhhccceEeeccccccCCHHHHHHHHH-HH-H
Confidence 32110 000 00 01111 367899999976 6899999999974 33322 24444544442 22 2
Q ss_pred hhHHhcCCCCCCcccCHHHHHHHHHHhhhhhhHHH----HHHHHHHHHHHHHHHHhhcCCC--------------ceEec
Q psy8969 542 QAMKESGLSPEQITLEPSAIQVLIKNYCRESGVRN----LQKHIEKVTRKVALTIVKKESD--------------KVTVT 603 (1230)
Q Consensus 542 ~~~~~~gl~~~~i~~~~~~~~~li~~~~~e~gvR~----l~~~i~~i~r~~~~~~~~~~~~--------------~~~i~ 603 (1230)
+.....+ ....++++++..|++.|+|++|+|+ ..|.+..++|.+ ..++..... ...++
T Consensus 304 ~~~~~~~---~~~~ls~eAl~~Li~~~~r~~g~r~~l~~~~R~l~~llr~A-~~~A~~~~~~~I~~edv~~A~~~~~~i~ 379 (604)
T 3k1j_A 304 QEVKRDG---KIPHFTKEAVEEIVREAQKRAGRKGHLTLRLRDLGGIVRAA-GDIAVKKGKKYVEREDVIEAVKMAKPLE 379 (604)
T ss_dssp HHHHHHC---SSCCBBHHHHHHHHHHHHHTTCSTTEEECCHHHHHHHHHHH-HHHHHHTTCSSBCHHHHHHHHHHTCCHH
T ss_pred HHHhhcc---CcccCCHHHHHHHHHHHhhhhccccccccCHHHHHHHHHHH-HHHHHhcCcccccHHHHHHHHHhhhhhH
Confidence 2233222 2347899999999999999999775 356666666653 223221111 13455
Q ss_pred hhhhhhhcCCCcccccccccCCCCceEEeeeeeeecc-C---------------CcceEEEecc--------------cc
Q psy8969 604 NDNLSDFVGKPIFSHDRLFEITPPGVVTRKVALTIVK-K---------------ESDKVTVTND--------------NL 653 (1230)
Q Consensus 604 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~---------------~~~~~~~~~~--------------~~ 653 (1230)
.+.++.|+|.+++..........+|+++|+ +|+..+ + +.|.+.+||. .+
T Consensus 380 ~~~~e~~l~~~~~~~~i~~~~~~~g~v~gl-a~~~~~~g~~~~ie~~~~~~~~~~~g~~~~~g~~~~~~~es~~~~~~~l 458 (604)
T 3k1j_A 380 KQLADWYIERKKEYQVIKTEGSEIGRVNGL-AVIGEQSGIVLPIEAVVAPAASKEEGKIIVTGKLGEIAKEAVQNVSAII 458 (604)
T ss_dssp HHHHHHHHHHHHTTCCCCCSSEETTEEEEE-EEETTTEEEEEEEEEEEEECSSSSBCCEEEESCBCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhccccccchhhccCcccEEEEEE-EEECCCccEEEEEEEEEEeCCCCCCCEEEEecChHHHHHHHHHHHHHHH
Confidence 666778888887777666777899999994 776433 1 1356777761 12
Q ss_pred ccccCCCCcccccccccCCCcceeeeeccccCcCCCCCchhHHHHHHHHHhhhCCCCCcCceeeeeEEEeeeEeecCCch
Q psy8969 654 SDFVGKPIFSHDRLFEITPPGVVMGLAWTAMAVKKDGPSAGITITTALVSLATGKPIKQNLAMTGEISLVGKVLPVGGIK 733 (1230)
Q Consensus 654 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~pkdgpsag~~~~~a~~s~~~~~~v~~~~amtgeitl~g~v~~iGG~k 733 (1230)
..+.+ -.|...++|+++++|+ +||||||||+||++||+|+++++||++++||||||+|+|+|+||||++
T Consensus 459 ~~~~~-~~~~~~~i~i~~~~~~----------~~~~gpsa~l~~~~ai~sa~~~~~~~~~~~~~Gei~l~G~v~~v~g~~ 527 (604)
T 3k1j_A 459 KRYKG-EDISRYDIHVQFLQTY----------EGVEGDAASISVATAVISALEGIPIRQDVAMTGSLSVRGEVLPIGGAT 527 (604)
T ss_dssp HHHHC-GGGGGEEEEEEETTCT----------TCBCSSTTHHHHHHHHHHHHHTCCEETTEEECCEECTTSBEECCSCHH
T ss_pred Hhhhc-cCCCCCcEEEEEcCCc----------ccCCCccchHHHHHHHHHHcCCCCCCCCeEEEEEecCCceEEeeCCHH
Confidence 22222 2355668999999998 899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCcceeecCccccccccCchhhHhhccceecccchhhhhhccccc
Q psy8969 734 EKTIAAKRVGVHTILMPEENKKDFTDLPEYIREGLNVHFVSEWRQVYDLVFEH 786 (1230)
Q Consensus 734 ek~~aa~r~gi~~vi~p~~N~kDl~elPe~vr~~l~i~fvs~~~eVl~ia~~h 786 (1230)
||+++|+|+|+++||+|.+|.+++. +|+.+..++++++|+++++++..++..
T Consensus 528 ~k~~~a~~~G~~~~iiP~~n~~~~~-~~~~~~~~~~i~~v~~~~e~~~~~~~~ 579 (604)
T 3k1j_A 528 PAIEAAIEAGIKMVIIPKSNEKDVF-LSKDKAEKIQIFPVETIDEVLEIALEE 579 (604)
T ss_dssp HHHHHHHHHTCCEEEEEGGGGGGCC-CCHHHHTTCEEEEESBHHHHHHHHBCC
T ss_pred HHHHHHHHcCCCEEEECHHHhhhhc-ccccccCCcEEEEeCCHHHHHHHHHhc
Confidence 9999999999999999999999997 899999999999999999999998743
No 3
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=100.00 E-value=5.4e-34 Score=302.48 Aligned_cols=185 Identities=42% Similarity=0.834 Sum_probs=141.8
Q ss_pred hhHHHhhhhcccCCCceecCCCccCccccChhhHHHHHhhccCCCCccccccccccccCCchhHhhhhccccCCCCccCC
Q psy8969 806 SNIRKVHIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICD 885 (1230)
Q Consensus 806 ~~~L~~H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~~~~C~k~F~~~~~L~~H~~~H~~ekpy~C~ 885 (1230)
...|..|+++|.++++|.|+. |++.|.+...|..|++.|+++++|.|.. |++.|.+...|..|+++|+++++|.|+
T Consensus 6 ~~~l~~h~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~ 81 (190)
T 2i13_A 6 SSSSVAQAALEPGEKPYACPE--CGKSFSRSDHLAEHQRTHTGEKPYKCPE--CGKSFSDKKDLTRHQRTHTGEKPYKCP 81 (190)
T ss_dssp ---------------------------CCSSHHHHHGGGCC---CCEECTT--TCCEESSHHHHHHHHHHHHCCCCEECT
T ss_pred hccchhhhhhcCCCCCCcCCC--CccccCCHHHHHHHHHHcCCCCCccCCC--cCchhCCHHHHHHHHHhcCCCCCccCc
Confidence 467889999999999999999 9999999999999999999999999986 999999999999999999999999999
Q ss_pred CCCcccCChhhHHhHHhhhcCCCCCCCCCcccccchhhcccccccccccccccCccceeeccccCCCCcCCCCCCccCCC
Q psy8969 886 RCPRSYRQLCTLNVHKKTNHRESKNKKPSNRVSNQLISIQSSLTSYYSFVHFSGSTLFIETSVRKPTSVATDPADDKKSD 965 (1230)
Q Consensus 886 ~Cgk~F~~~~~L~~H~k~hh~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~e~~~~~p~~~~~~~~~~~~~~ 965 (1230)
.|++.|.+...|..|++.|+++
T Consensus 82 ~C~~~f~~~~~l~~H~~~h~~~---------------------------------------------------------- 103 (190)
T 2i13_A 82 ECGKSFSQRANLRAHQRTHTGE---------------------------------------------------------- 103 (190)
T ss_dssp TTCCEESCHHHHHHHHHHHHTC----------------------------------------------------------
T ss_pred ccCCccCCHHHHHHHHHhcCCC----------------------------------------------------------
Confidence 9999999999999998877421
Q ss_pred CCccccccccchhhhccchhhhhhcccccccCCCcccccccccccccCCCcccCCCCCCccchhhhhhhcccCCCccccc
Q psy8969 966 GSLFLTGHLGDVMKESANISLTVARNFLSTIEPDNTFLNTRHLHLHVPEGAVKKDGPSAGITITTALVSLATGKPIKQNL 1045 (1230)
Q Consensus 966 ~s~~~~~~~~~~~~e~~~~~~~~~~~~~s~~~~~~tf~~~~hl~~H~~~~~~~~~~~s~~~~~~~~~~s~~~~k~~~~~~ 1045 (1230)
T Consensus 104 -------------------------------------------------------------------------------- 103 (190)
T 2i13_A 104 -------------------------------------------------------------------------------- 103 (190)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccccccccccccCCccccccccchhhHhhhhhcccceeeecCCccchhhhhhhhhhhhhhhhhhcCCCCCCCCCCCC
Q psy8969 1046 AMTGEISLVGKVLPVGGIKEKTIALKPLIQQQEQHKSKMFIIVDLDDVDREEDMIFELEDEDLMEEEGGKQTGSSGGGGG 1125 (1230)
Q Consensus 1046 ~~~~~~~~~~~~~~~~~~~~k~~~~~~l~~~~~~h~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~e~~~~~~~~s~~~~~ 1125 (1230)
T Consensus 104 -------------------------------------------------------------------------------- 103 (190)
T 2i13_A 104 -------------------------------------------------------------------------------- 103 (190)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CcccccCCCCCccCCCCCCCCCCchhhhccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeecccccCcc
Q psy8969 1126 GTVKKSTSSENNVCPECKKTFSSAHHMKVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKS 1205 (1230)
Q Consensus 1126 ~~~~~~t~~kpy~C~~CgK~F~s~s~Lk~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~~e~CGKs 1205 (1230)
++|.|+.|++.|.+.+.|..|+++|++++||+|+ .|++.|.+++.|.+|+++|++++||.| ++||+.
T Consensus 104 ---------~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~L~~H~~~H~~~~~~~C--~~C~~~ 170 (190)
T 2i13_A 104 ---------KPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCP--ECGKSFSREDNLHTHQRTHTGEKPYKC--PECGKS 170 (190)
T ss_dssp ---------CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECT--TTCCEESCHHHHHHHHHHHHCCCCEEC--TTTCCE
T ss_pred ---------CCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECC--CCCcccCCHHHHHHHHHhcCCCCCeEC--CCCCCc
Confidence 2467999999999999999999999999999995 599999999999999999999999999 479999
Q ss_pred ccchhhHHHHhhhccCcccc
Q psy8969 1206 FKTSGDLQKHVRTHTDEFQM 1225 (1230)
Q Consensus 1206 F~~ks~LkrH~R~HtGE~~~ 1225 (1230)
|.++.+|.+|+++|+||+.+
T Consensus 171 f~~~~~L~~H~~~H~~~k~~ 190 (190)
T 2i13_A 171 FSRRDALNVHQRTHTGKKTS 190 (190)
T ss_dssp ESSHHHHHHHHTTC------
T ss_pred cCCHHHHHHHHHhcCCCCCC
Confidence 99999999999999999764
No 4
>1g41_A Heat shock protein HSLU; AAA-ATPase, CLPY, ATP-dependent proteolysis, chaperone; HET: ADP; 2.30A {Haemophilus influenzae} SCOP: c.37.1.20 PDB: 1g3i_A* 1im2_A* 1kyi_A* 1g4a_E* 1g4b_E 1yyf_A* 1do0_A* 1do2_A* 1e94_E* 1hqy_E* 1ht1_E* 1ht2_E*
Probab=99.97 E-value=8.1e-32 Score=318.96 Aligned_cols=269 Identities=20% Similarity=0.314 Sum_probs=210.6
Q ss_pred ccHHHHhhhhcccccChHHHHHHHHHHHHHhhhc--------CCCCCceEEEeCCCCCCchHHHHHHHHHhCCCeEEEec
Q psy8969 343 LDLTQAAKILDDDHYGMEDVKKRILEFIAVSQLK--------GTTQGKILCFYGPPGVGKTSIAKSIARALNREYFRFSV 414 (1230)
Q Consensus 343 ~~~~~~~~~l~~d~~G~~~vK~~i~e~l~~~~~~--------~~~~~~~llL~GPPG~GKTslak~iA~~l~~~~~~~~~ 414 (1230)
+......+.||++++|++++|+.|...+...+.+ ....+..+||+||||||||++|++||+.++.+|+.++.
T Consensus 4 ~tP~~i~~~Ld~~IvGqe~ak~~l~~av~~~~~r~~~~~~~~~~~~~~~iLl~GppGtGKT~lar~lA~~l~~~~~~v~~ 83 (444)
T 1g41_A 4 MTPREIVSELDQHIIGQADAKRAVAIALRNRWRRMQLQEPLRHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEA 83 (444)
T ss_dssp CCHHHHHHHHHTTCCSCHHHHHHHHHHHHHHHHHHHSCTTTTTTCCCCCEEEECCTTSSHHHHHHHHHHHTTCCEEEEEG
T ss_pred CCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhhccccccccccCCceEEEEcCCCCCHHHHHHHHHHHcCCCceeecc
Confidence 4567788899999999999999998887554322 12345779999999999999999999999999999985
Q ss_pred CCcchh--------HHHhhccc------------------------cc----------------ccc-------------
Q psy8969 415 GGMSDV--------AEIKGHRR------------------------TY----------------VGA------------- 433 (1230)
Q Consensus 415 ~~~~d~--------~~i~g~~~------------------------~~----------------~g~------------- 433 (1230)
..+.+. ..++.... .. +++
T Consensus 84 ~~~~~~g~vG~d~e~~lr~lf~~a~~~~~~De~d~~~~~~~~~~e~rvl~~LL~~~dg~~~~~~v~a~~TN~~~~ld~aL 163 (444)
T 1g41_A 84 TKFTEVGYVGKEVDSIIRDLTDSAMKLVRQQEIAKNRARAEDVAEERILDALLPPAKNQWGEVENHDSHSSTRQAFRKKL 163 (444)
T ss_dssp GGGC----CCCCTHHHHHHHHHHHHHHHHHHHHHSCC-------------------------------------------
T ss_pred hhhcccceeeccHHHHHHHHHHHHHhcchhhhhhhhhccchhhHHHHHHHHHHHHhhccccccccccccccCHHHHHHHH
Confidence 432220 00000000 00 000
Q ss_pred --------------------------CchhH-----------------------------------------------HH
Q psy8969 434 --------------------------MPGKV-----------------------------------------------IQ 440 (1230)
Q Consensus 434 --------------------------~~g~i-----------------------------------------------~~ 440 (1230)
.||.- ..
T Consensus 164 ~rggr~D~~i~i~lP~~~~~~~ei~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~v~~a~~~l~~~e~~~l~~~~~~~~~ 243 (444)
T 1g41_A 164 REGQLDDKEIEIDVSAGVSMGVEIMAPPGMEEMTNQLQSLFQNLGSDKTKKRKMKIKDALKALIDDEAAKLINPEELKQK 243 (444)
T ss_dssp --------------------------------------------------------------CCGGGSCSSCCHHHHHHH
T ss_pred HcCCCcceEEEEcCCCCccchhhhhcCCChHHHHHHHHHHHHhhcCCCCcceeeeHHHHHHHHHHHHHHHccCHHHHHHH
Confidence 00000 00
Q ss_pred HHHhhcCCCCEEEEecccccCCC---CCCChhh-----HHHhhcChhhhhhhhhhccCccccCCceEEEEec-----CCC
Q psy8969 441 CMKKTKTENPLVLIDEVDKIGKG---YSGDPAS-----ALLEMLDPEQNANFLDHYLDVPVDLSRVLFICTA-----NVI 507 (1230)
Q Consensus 441 ~~~~~~~~~pvillDEIDk~~~~---~~~~~~~-----all~~ld~~q~~~f~d~~~~~~~d~s~v~~I~Ta-----N~~ 507 (1230)
++..+ ..++|+++|||||++++ ..+|+.+ +||++||++|+.. +| +++|+++|+||||+ |+.
T Consensus 244 ai~~a-e~~~il~~DEidki~~~~~~~~~D~s~egvq~aLL~~le~~~~~~---~~--~~~d~~~ilfI~~gaf~~~~~~ 317 (444)
T 1g41_A 244 AIDAV-EQNGIVFIDEIDKICKKGEYSGADVSREGVQRDLLPLVEGSTVST---KH--GMVKTDHILFIASGAFQVARPS 317 (444)
T ss_dssp HHHHH-HHHCEEEEETGGGGSCCSSCSSSHHHHHHHHHHHHHHHHCCEEEE---TT--EEEECTTCEEEEEECCSSCCGG
T ss_pred HHHHh-ccCCeeeHHHHHHHhhccCCCCCCchHHHHHHHHHHHhccccccc---cc--ceecCCcEEEEeccccccCChh
Confidence 00000 14679999999999865 5678775 9999999998765 66 68999999999998 777
Q ss_pred CCCCHhhhcccce-eecCCCCHHHHHHHH---HHhhcchhHHhcCCCCCCcccCHHHHHHHHHH------hhhhhhHHHH
Q psy8969 508 DTIPEPLRDRMEM-IDVSGYVAEEKVAIA---AQYLIPQAMKESGLSPEQITLEPSAIQVLIKN------YCRESGVRNL 577 (1230)
Q Consensus 508 ~~I~~~L~~R~~~-i~~~~~~~~e~~~i~---~~~l~~~~~~~~gl~~~~i~~~~~~~~~li~~------~~~e~gvR~l 577 (1230)
+.| |+|++||++ |.+++|+.+|+..|+ +++|+++..+.++++..++.++++++..|++. ||+++|+|+|
T Consensus 318 dli-pel~~R~~i~i~l~~lt~~e~~~Il~~~~~~l~~q~~~~~~~~~~~l~~~~~al~~i~~~a~~~~~~t~~~GaR~L 396 (444)
T 1g41_A 318 DLI-PELQGRLPIRVELTALSAADFERILTEPHASLTEQYKALMATEGVNIAFTTDAVKKIAEAAFRVNEKTENIGARRL 396 (444)
T ss_dssp GSC-HHHHTTCCEEEECCCCCHHHHHHHHHSSTTCHHHHHHHHHHTTTCEEEECHHHHHHHHHHHHHHHHHSCCCGGGHH
T ss_pred hcc-hHHhcccceeeeCCCCCHHHHHHHHHHHHHhHHHHHHHHhcccCceEEECHHHHHHHHHHHHHhccCCccCCchHH
Confidence 755 889999998 799999999999999 79999999999999999999999999999984 7799999999
Q ss_pred HHHHHHHHHHHHHHHhhcCCCceEechhhhhhhcCCCcccc
Q psy8969 578 QKHIEKVTRKVALTIVKKESDKVTVTNDNLSDFVGKPIFSH 618 (1230)
Q Consensus 578 ~~~i~~i~r~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 618 (1230)
++.|++++++++.++.......++||.+.|.+++|+.....
T Consensus 397 ~~~ie~~~~~~~~~~~~~~~~~~~i~~~~v~~~l~~~~~~~ 437 (444)
T 1g41_A 397 HTVMERLMDKISFSASDMNGQTVNIDAAYVADALGEVVENE 437 (444)
T ss_dssp HHHHHHHHHHHHHHGGGCTTCEEEECHHHHHHHHTTTTTCH
T ss_pred HHHHHHHHHHHHhhccccCCCeEEEeHHHHHHhcCccccCC
Confidence 99999999999999987766789999999999999876544
No 5
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=99.97 E-value=3.5e-32 Score=288.48 Aligned_cols=116 Identities=41% Similarity=0.864 Sum_probs=93.4
Q ss_pred cccCCCCCCCCCCCCCCCCccChhHHHhhhhcccCCCceecCCCccCccccChhhHHHHHhhccCCCCcccccccccccc
Q psy8969 784 FEHTSERPFPCPVLGCDRSFTTSNIRKVHIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQVRDCQKRF 863 (1230)
Q Consensus 784 ~~ht~ekp~~C~~~~C~k~F~~~~~L~~H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~~~~C~k~F 863 (1230)
..|.++++|.|+. |++.|.....|..|+++|+++++|.|.. |++.|.+...|..|++.|++++||.|.. |++.|
T Consensus 14 ~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f 87 (190)
T 2i13_A 14 ALEPGEKPYACPE--CGKSFSRSDHLAEHQRTHTGEKPYKCPE--CGKSFSDKKDLTRHQRTHTGEKPYKCPE--CGKSF 87 (190)
T ss_dssp -------------------CCSSHHHHHGGGCC---CCEECTT--TCCEESSHHHHHHHHHHHHCCCCEECTT--TCCEE
T ss_pred hhcCCCCCCcCCC--CccccCCHHHHHHHHHHcCCCCCccCCC--cCchhCCHHHHHHHHHhcCCCCCccCcc--cCCcc
Confidence 3478899999998 9999999999999999999999999999 9999999999999999999999999986 99999
Q ss_pred CCchhHhhhhccccCCCCccCCCCCcccCChhhHHhHHhhhc
Q psy8969 864 TEYSSLYKHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNH 905 (1230)
Q Consensus 864 ~~~~~L~~H~~~H~~ekpy~C~~Cgk~F~~~~~L~~H~k~hh 905 (1230)
.+...|..|++.|+++++|.|+.|++.|.+...|..|++.|+
T Consensus 88 ~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~ 129 (190)
T 2i13_A 88 SQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHT 129 (190)
T ss_dssp SCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999988774
No 6
>4b4t_K 26S protease regulatory subunit 6B homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=99.96 E-value=4.4e-31 Score=312.07 Aligned_cols=280 Identities=24% Similarity=0.357 Sum_probs=198.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH---hCC--C-CCChhHHHHHHHHHHhcCCCChhHH
Q psy8969 228 LSLLKKELELNKLQQKIGREVEEKVKQQHRKY-ILQEQLKAIKKE---LGL--E-KDDKDAIEEKFRERIKDKKVPPPVM 300 (1230)
Q Consensus 228 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~q~~~-~l~eq~~~i~~e---lg~--~-~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (1230)
+..|.+|++.+.++++ .+++++...++|+ +++|+++.||.. .|. + -|+... =+....-|+.+.
T Consensus 51 lk~le~~~~~L~~e~e---~l~~~~~~~~~e~~~~~ee~~~l~~~~~~vg~~~e~~d~~~~-------iv~~~~~~~~~v 120 (428)
T 4b4t_K 51 LKKLEKEYELLTLQED---YIKDEQRHLKRELKRAQEEVKRIQSVPLVIGQFLEPIDQNTG-------IVSSTTGMSYVV 120 (428)
T ss_dssp HHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHTCSCEEEEEEEEEEETTEE-------EEEETTSCEEEE
T ss_pred HHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHcCCCceeeEEEEEccCCee-------EEecCCCCEEEE
Confidence 4457788888877754 5677777888888 899999998863 110 0 000000 012222232221
Q ss_pred HHHHHHHHHhccCCCCCCccchhhhHHHHhhcCCCCCc-ccccccHHHHhhhhcccccChHHHHHHHHHHHHHhhh----
Q psy8969 301 EVLNEELAKLGFLESHSSEFNVTRNYLDWLTSLPWGIQ-SEENLDLTQAAKILDDDHYGMEDVKKRILEFIAVSQL---- 375 (1230)
Q Consensus 301 ~~~~~e~~~l~~~~~~~~e~~v~~~yl~~~~~lpw~~~-~~~~~~~~~~~~~l~~d~~G~~~vK~~i~e~l~~~~~---- 375 (1230)
. +...+++ +.+.+ +....+-++++.|+.-|||... ......+.+..++.++|++|++++|+.|.+.+.....
T Consensus 121 ~-~~~~~~~-~~~~~-~~~v~~~~~~~~~~~~l~~~~d~~v~~~~~~~~p~v~~~digGl~~~k~~l~e~v~~pl~~p~~ 197 (428)
T 4b4t_K 121 R-ILSTLDR-ELLKP-SMSVALHRHSNALVDILPPDSDSSISVMGENEKPDVTYADVGGLDMQKQEIREAVELPLVQADL 197 (428)
T ss_dssp C-BCSSSCT-TTCCT-TCEEEECSSSCCEEEEECSCCCCSSCCCEEESSCSCCGGGSCSCHHHHHHHHHHHHHHHHCHHH
T ss_pred e-ccccccH-hhCCC-CceeeeecchhhHHhhcCcccCcchhhccCCCCCCCCHHHhccHHHHHHHHHHHHHHHHhCHHH
Confidence 1 1111221 12223 3456677888899999998754 4466677788889999999999999999999876433
Q ss_pred ---cCCCCCceEEEeCCCCCCchHHHHHHHHHhCCCeEEEecCCcchhHHHhhccccccccCchhHHHHHHhhcCCCC-E
Q psy8969 376 ---KGTTQGKILCFYGPPGVGKTSIAKSIARALNREYFRFSVGGMSDVAEIKGHRRTYVGAMPGKVIQCMKKTKTENP-L 451 (1230)
Q Consensus 376 ---~~~~~~~~llL~GPPG~GKTslak~iA~~l~~~~~~~~~~~~~d~~~i~g~~~~~~g~~~g~i~~~~~~~~~~~p-v 451 (1230)
.|...++++|||||||||||+||++||..+|++|+.++.+.+.+ .|+|..+..|.+.|..|....| |
T Consensus 198 ~~~~g~~~prGiLL~GPPGtGKT~lakAiA~~~~~~~~~v~~~~l~~---------~~~Ge~e~~ir~lF~~A~~~aP~I 268 (428)
T 4b4t_K 198 YEQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTKAAFIRVNGSEFVH---------KYLGEGPRMVRDVFRLARENAPSI 268 (428)
T ss_dssp HHHHCCCCCCEEEEESCTTTTHHHHHHHHHHHHTCEEEEEEGGGTCC---------SSCSHHHHHHHHHHHHHHHTCSEE
T ss_pred HHhCCCCCCceEEEECCCCCCHHHHHHHHHHHhCCCeEEEecchhhc---------cccchhHHHHHHHHHHHHHcCCCe
Confidence 37788999999999999999999999999999999999877665 7999999999999999988877 7
Q ss_pred EEEecccccCCCCC-----CCh--hhHHHhhcChhhhhhhhhhccCccccCCceEEEEecCCCCCCCHhhhc--ccce-e
Q psy8969 452 VLIDEVDKIGKGYS-----GDP--ASALLEMLDPEQNANFLDHYLDVPVDLSRVLFICTANVIDTIPEPLRD--RMEM-I 521 (1230)
Q Consensus 452 illDEIDk~~~~~~-----~~~--~~all~~ld~~q~~~f~d~~~~~~~d~s~v~~I~TaN~~~~I~~~L~~--R~~~-i 521 (1230)
|||||||.++..+. ++. ...+.++|. .+|.+ ...++|+||+|||+++.||+||++ ||+. |
T Consensus 269 ifiDEiD~i~~~R~~~~~~~~~~~~r~l~~lL~------~ldg~----~~~~~v~vI~aTN~~~~LD~AllRpGRfd~~I 338 (428)
T 4b4t_K 269 IFIDEVDSIATKRFDAQTGSDREVQRILIELLT------QMDGF----DQSTNVKVIMATNRADTLDPALLRPGRLDRKI 338 (428)
T ss_dssp EEEECTHHHHCSCSSSCSCCCCHHHHHHHHHHH------HHHHS----CSSCSEEEEEEESCSSSCCHHHHSSSSEEEEE
T ss_pred eechhhhhhhccccCCCCCCChHHHHHHHHHHH------HhhCC----CCCCCEEEEEecCChhhcChhhhcCCcceEEE
Confidence 77999999975442 111 112222221 12221 234689999999999999999998 9984 7
Q ss_pred ecCC-CCHHHHHHHHHHhh
Q psy8969 522 DVSG-YVAEEKVAIAAQYL 539 (1230)
Q Consensus 522 ~~~~-~~~~e~~~i~~~~l 539 (1230)
.+++ ++.+++..|++.++
T Consensus 339 ~~p~lPd~~~R~~Il~~~~ 357 (428)
T 4b4t_K 339 EFPSLRDRRERRLIFGTIA 357 (428)
T ss_dssp ECCSSCCHHHHHHHHHHHH
T ss_pred EcCCCCCHHHHHHHHHHHh
Confidence 7864 56777778876655
No 7
>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A
Probab=99.96 E-value=2e-29 Score=267.26 Aligned_cols=176 Identities=32% Similarity=0.597 Sum_probs=149.7
Q ss_pred cCCCceecCCCccCccccChhhHHHHHhhccCCCCccccccccccccCCchhHhhhhccccCCCCccCC--CCCcccCCh
Q psy8969 817 TGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICD--RCPRSYRQL 894 (1230)
Q Consensus 817 ~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~~~~C~k~F~~~~~L~~H~~~H~~ekpy~C~--~Cgk~F~~~ 894 (1230)
.+.++|.|..+.||+.|.+...|..|++.|++++||.|..+.|++.|.+...|..|+++|++++||.|+ .|++.|.+.
T Consensus 8 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~ 87 (190)
T 1tf6_A 8 VVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTK 87 (190)
T ss_dssp --CCCCBCSSTTTCCBCSSHHHHHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCH
T ss_pred CCCcceeCCCCCCcchhCCHHHHHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCH
Confidence 457889994222999999999999999999999999993224999999999999999999999999999 899999999
Q ss_pred hhHHhHHhhhcCCCCCCCCCcccccchhhcccccccccccccccCccceeeccccCCCCcCCCCCCccCCCCCccccccc
Q psy8969 895 CTLNVHKKTNHRESKNKKPSNRVSNQLISIQSSLTSYYSFVHFSGSTLFIETSVRKPTSVATDPADDKKSDGSLFLTGHL 974 (1230)
Q Consensus 895 ~~L~~H~k~hh~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~e~~~~~p~~~~~~~~~~~~~~~s~~~~~~~ 974 (1230)
..|..|++.+|..
T Consensus 88 ~~l~~H~~~~h~~------------------------------------------------------------------- 100 (190)
T 1tf6_A 88 ANMKKHFNRFHNI------------------------------------------------------------------- 100 (190)
T ss_dssp HHHHHHHHTTSST-------------------------------------------------------------------
T ss_pred HHHHHHHHHhcCC-------------------------------------------------------------------
Confidence 9999998544310
Q ss_pred cchhhhccchhhhhhcccccccCCCcccccccccccccCCCcccCCCCCCccchhhhhhhcccCCCcccccccccccccc
Q psy8969 975 GDVMKESANISLTVARNFLSTIEPDNTFLNTRHLHLHVPEGAVKKDGPSAGITITTALVSLATGKPIKQNLAMTGEISLV 1054 (1230)
Q Consensus 975 ~~~~~e~~~~~~~~~~~~~s~~~~~~tf~~~~hl~~H~~~~~~~~~~~s~~~~~~~~~~s~~~~k~~~~~~~~~~~~~~~ 1054 (1230)
T Consensus 101 -------------------------------------------------------------------------------- 100 (190)
T 1tf6_A 101 -------------------------------------------------------------------------------- 100 (190)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccccCCccccccccchhhHhhhhhcccceeeecCCccchhhhhhhhhhhhhhhhhhcCCCCCCCCCCCCCcccccCCC
Q psy8969 1055 GKVLPVGGIKEKTIALKPLIQQQEQHKSKMFIIVDLDDVDREEDMIFELEDEDLMEEEGGKQTGSSGGGGGGTVKKSTSS 1134 (1230)
Q Consensus 1055 ~~~~~~~~~~~k~~~~~~l~~~~~~h~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~e~~~~~~~~s~~~~~~~~~~~t~~ 1134 (1230)
+.
T Consensus 101 ------------------------------------------------------------------------------~~ 102 (190)
T 1tf6_A 101 ------------------------------------------------------------------------------KI 102 (190)
T ss_dssp ------------------------------------------------------------------------------TT
T ss_pred ------------------------------------------------------------------------------Cc
Confidence 01
Q ss_pred CCccC--CCCCCCCCCchhhhccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeecccc---cCccccch
Q psy8969 1135 ENNVC--PECKKTFSSAHHMKVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEF---CSKSFKTS 1209 (1230)
Q Consensus 1135 kpy~C--~~CgK~F~s~s~Lk~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~~e~---CGKsF~~k 1209 (1230)
++|.| +.||+.|.+.++|..|+++|+|++||+|+++.|+++|.+++.|++|+++|+| |.| +. |++.|.+.
T Consensus 103 ~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~---~~C--~~~~~C~~~f~~~ 177 (190)
T 1tf6_A 103 CVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPC--KKDDSCSFVGKTW 177 (190)
T ss_dssp SCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSCS---CCC--CSTTTCCCCCSCH
T ss_pred ceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHHhCC---CcC--CCCCcCCCccccH
Confidence 24678 8999999999999999999999999999533499999999999999999999 899 47 99999999
Q ss_pred hhHHHHhhhccCc
Q psy8969 1210 GDLQKHVRTHTDE 1222 (1230)
Q Consensus 1210 s~LkrH~R~HtGE 1222 (1230)
..|.+|+++|+||
T Consensus 178 ~~l~~H~~~h~~e 190 (190)
T 1tf6_A 178 TLYLKHVAECHQD 190 (190)
T ss_dssp HHHHHHHTTCC--
T ss_pred HHHHHHHHhhcCC
Confidence 9999999999986
No 8
>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A
Probab=99.94 E-value=2.7e-27 Score=250.91 Aligned_cols=117 Identities=28% Similarity=0.657 Sum_probs=105.9
Q ss_pred CCCCCCCCCCCCCCCCccChhHHHhhhhcccCCCceec--CCCccCccccChhhHHHHHhhccCCCCccccccccccccC
Q psy8969 787 TSERPFPCPVLGCDRSFTTSNIRKVHIRTHTGEKPYVC--GEAGCDKSFASATNYKNHMRIHSGEKPYVCQVRDCQKRFT 864 (1230)
Q Consensus 787 t~ekp~~C~~~~C~k~F~~~~~L~~H~r~H~gekpy~C--~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~~~~C~k~F~ 864 (1230)
...++|.|.+..|++.|.....|..|+++|+++++|.| .. |++.|.+...|..|+++|++++||.|..+.|++.|.
T Consensus 8 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~ 85 (190)
T 1tf6_A 8 VVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEG--CEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFT 85 (190)
T ss_dssp --CCCCBCSSTTTCCBCSSHHHHHHHHHHHHCCCSSCCSSTT--CCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEES
T ss_pred CCCcceeCCCCCCcchhCCHHHHHHHHHhcCCCCCccCCCCC--CChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccC
Confidence 45789999544599999999999999999999999999 77 999999999999999999999999998334999999
Q ss_pred CchhHhhhh-ccc-cCCCCccC--CCCCcccCChhhHHhHHhhhc
Q psy8969 865 EYSSLYKHT-LVH-SDIRPFIC--DRCPRSYRQLCTLNVHKKTNH 905 (1230)
Q Consensus 865 ~~~~L~~H~-~~H-~~ekpy~C--~~Cgk~F~~~~~L~~H~k~hh 905 (1230)
+...|..|+ +.| .++++|.| +.|++.|.+...|..|+++|+
T Consensus 86 ~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~ 130 (190)
T 1tf6_A 86 TKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHT 130 (190)
T ss_dssp CHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGS
T ss_pred CHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhC
Confidence 999999999 778 57899999 999999999999999988775
No 9
>1rre_A ATP-dependent protease LA; catalytic Ser-Lys DYAD, hydrolase; HET: MSE; 1.75A {Escherichia coli} SCOP: d.14.1.10 PDB: 1rr9_A*
Probab=99.93 E-value=1.9e-26 Score=245.80 Aligned_cols=156 Identities=39% Similarity=0.614 Sum_probs=130.8
Q ss_pred cccccCCCCceEEeeeeeeeccC-----------CcceEEEec--------------cccc----cccCCCC-ccccccc
Q psy8969 619 DRLFEITPPGVVTRKVALTIVKK-----------ESDKVTVTN--------------DNLS----DFVGKPI-FSHDRLF 668 (1230)
Q Consensus 619 ~~~~~~~~~g~~~~~~~~~~~~~-----------~~~~~~~~~--------------~~~~----~~~~~~~-~~~~~~~ 668 (1230)
++..+...+|+++| ++|+..++ +.+.+.+|| +.+. .++..+. |...++|
T Consensus 3 ~~~~~~~~~G~v~g-la~~~~~g~~v~IE~~~~~G~g~~~itG~~~~~~kES~~~a~s~~~~~~~~~g~~~~~~~~~di~ 81 (200)
T 1rre_A 3 GRADNENRVGQVTG-LAWTEVGGDLLTIETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKLGINPDFYEKRDIH 81 (200)
T ss_dssp -------CCEEEEE-EEEETTEEEEEEEEEEEEECSSCEEEESSBCHHHHHHHHHHHHHHHHTHHHHTCCTTTTTSEEEE
T ss_pred cccccCCCcEEEEE-EEEecCCCEEEEEEEEEeCCCceEEEecCchHHHHHHHHHHHHHHHHhHHhcCCCcccCCcceEE
Confidence 45566788999999 58886653 246788876 1122 3333333 6667899
Q ss_pred ccCCCcceeeeeccccCcCCCCCchhHHHHHHHHHhhhCCCCCcCceeeeeEEEeeeEeecCCchHHHHHHHHcCcceee
Q psy8969 669 EITPPGVVMGLAWTAMAVKKDGPSAGITITTALVSLATGKPIKQNLAMTGEISLVGKVLPVGGIKEKTIAAKRVGVHTIL 748 (1230)
Q Consensus 669 ~~~~~g~~~~~~~~~~~~pkdgpsag~~~~~a~~s~~~~~~v~~~~amtgeitl~g~v~~iGG~kek~~aa~r~gi~~vi 748 (1230)
+|+++|. +||||||||++|++||+|+++++|+++++||||||+|+|+|+||||+++|+++|+|+|+++||
T Consensus 82 vnl~~g~----------~~k~GpsadLaia~AilSa~~~~p~~~~~a~tGEl~L~G~VrpV~Gi~~ki~~A~~~G~~~vi 151 (200)
T 1rre_A 82 VHVPEGA----------TPKDGPAAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAAHRGGIKTVL 151 (200)
T ss_dssp EECSSTT----------SCEESSTTHHHHHHHHHHHHHTCCBCTTEEECCEECTTCBEECCSCHHHHHHHHHHTTCCEEE
T ss_pred EEeCCcc----------ccCCCCcchHHHHHHHHHHcCCCCCCCCEEEEEEEcCCceEEeeCCHHHHHHHHHHcCCCEEE
Confidence 9999998 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCccccccccCchhhHhhccceecccchhhhhhcccc
Q psy8969 749 MPEENKKDFTDLPEYIREGLNVHFVSEWRQVYDLVFE 785 (1230)
Q Consensus 749 ~p~~N~kDl~elPe~vr~~l~i~fvs~~~eVl~ia~~ 785 (1230)
+|.+|.+++.++|+.+..+++++++++..+++.+++.
T Consensus 152 vP~~N~~e~~~~~~~~~~gi~v~~v~~l~ea~~~l~~ 188 (200)
T 1rre_A 152 IPFENKRDLEEIPDNVIADLDIHPVKRIEEVLTLALQ 188 (200)
T ss_dssp EEGGGGGGGGGSCHHHHHHSEEEEESBHHHHHHHHBS
T ss_pred echHHHHHhhhhHHhhcCCCEEEEcCCHHHHHHHHhh
Confidence 9999999999999999899999999999999998873
No 10
>2x36_A LON protease homolog, mitochondrial; hydrolase, catalytic DYAD, transit peptide; 2.00A {Homo sapiens}
Probab=99.93 E-value=2e-26 Score=246.57 Aligned_cols=156 Identities=51% Similarity=0.853 Sum_probs=132.4
Q ss_pred cccccCCCCceEEeeeeeeeccC--------------------CcceEEEecc----------c----c----ccccCCC
Q psy8969 619 DRLFEITPPGVVTRKVALTIVKK--------------------ESDKVTVTND----------N----L----SDFVGKP 660 (1230)
Q Consensus 619 ~~~~~~~~~g~~~~~~~~~~~~~--------------------~~~~~~~~~~----------~----~----~~~~~~~ 660 (1230)
++..+..++|+++| ++||.+|| +.|.+.+||. + + ..+....
T Consensus 2 ~~~~~~~~~G~v~G-La~t~~gg~~l~iE~~~~~~~~~~~~~~g~g~~~itG~~~~~~kES~~~a~s~~~~~~~~~~~~~ 80 (207)
T 2x36_A 2 ERMYDVTPPGVVMG-LAWTAMGGSTLFVETSLRRPQDKDAKGDKDGSLEVTGQLGEVMKESARIAYTFARAFLMQHAPAN 80 (207)
T ss_dssp --CCSSCCTTEEEE-EEEBSSSEEEEEEEEEESSCCC--------CEEEEESCCCHHHHHHHHHHHHHHHHHHHHHSTTC
T ss_pred CcccCCCCCeEEEE-eEEEccCCeEEEEEEEEEecccccccCCCCCeEEEEeCchHHHHHHHHHHHHHHHhccccccccc
Confidence 45567789999999 48986542 2367788761 1 1 1122222
Q ss_pred -CcccccccccCCCcceeeeeccccCcCCCCCchhHHHHHHHHHhhhCCCCCcCceeeeeEEEeeeEeecCCchHHHHHH
Q psy8969 661 -IFSHDRLFEITPPGVVMGLAWTAMAVKKDGPSAGITITTALVSLATGKPIKQNLAMTGEISLVGKVLPVGGIKEKTIAA 739 (1230)
Q Consensus 661 -~~~~~~~~~~~~~g~~~~~~~~~~~~pkdgpsag~~~~~a~~s~~~~~~v~~~~amtgeitl~g~v~~iGG~kek~~aa 739 (1230)
.|...++|+|+++|. +||||||||++|++||+|+++++|+++++||||||+|+|+|+||||+++|+++|
T Consensus 81 ~~~~~~di~vnl~~g~----------~~K~GpsadLaia~AilSa~~~~p~~~~~a~tGEl~L~G~VrpV~Gi~~ki~~A 150 (207)
T 2x36_A 81 DYLVTSHIHLHVPEGA----------TPKDGPSAGCTIVTALLSLAMGRPVRQNLAMTGEVSLTGKILPVGGIKEKTIAA 150 (207)
T ss_dssp CHHHHCEEEEECCSCB----------CTTTGGGGHHHHHHHHHHHHHTCCCCTTEEECCEECTTSBEECCSCHHHHHHHH
T ss_pred ccCccceEEEEeCCcc----------cCCCCCcchHHHHHHHHHHcCCCCCCCCEEEEEEECCCceEEeecCHHHHHHHH
Confidence 356678999999998 999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCcceeecCccccccccCchhhHhhccceecccchhhhhhcccc
Q psy8969 740 KRVGVHTILMPEENKKDFTDLPEYIREGLNVHFVSEWRQVYDLVFE 785 (1230)
Q Consensus 740 ~r~gi~~vi~p~~N~kDl~elPe~vr~~l~i~fvs~~~eVl~ia~~ 785 (1230)
+|+|+++||+|.+|.+++.++|+.+..+++++++++..+++++++.
T Consensus 151 ~~~G~~~vivP~~N~~e~~~~~~~~~~gi~v~~v~~l~e~~~~l~~ 196 (207)
T 2x36_A 151 KRAGVTCIVLPAENKKDFYDLAAFITEGLEVHFVEHYREIFDIAFP 196 (207)
T ss_dssp HHTTCCEEEEEGGGHHHHHTSCHHHHTTCEEEEESBHHHHHHHHCT
T ss_pred HHcCCCeEEecchhHHHHhhhhHhhcCCCEEEECCCHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999998863
No 11
>4b4t_J 26S protease regulatory subunit 8 homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=99.93 E-value=5.2e-26 Score=265.14 Aligned_cols=176 Identities=24% Similarity=0.386 Sum_probs=140.7
Q ss_pred HHHHhhhhcccccChHHHHHHHHHHHHHhhh-------cCCCCCceEEEeCCCCCCchHHHHHHHHHhCCCeEEEecCCc
Q psy8969 345 LTQAAKILDDDHYGMEDVKKRILEFIAVSQL-------KGTTQGKILCFYGPPGVGKTSIAKSIARALNREYFRFSVGGM 417 (1230)
Q Consensus 345 ~~~~~~~l~~d~~G~~~vK~~i~e~l~~~~~-------~~~~~~~~llL~GPPG~GKTslak~iA~~l~~~~~~~~~~~~ 417 (1230)
+.+...+-++|++|++++|+.|.+.+..+.. .|..+++++|||||||||||+||++||.+++.+|+.++.+.+
T Consensus 139 ~~~~p~v~~~dIgGl~~~k~~l~e~v~~Pl~~pe~f~~~gi~~prGvLL~GPPGTGKTllAkAiA~e~~~~f~~v~~s~l 218 (405)
T 4b4t_J 139 VEKVPDSTYDMVGGLTKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVAHHTDCKFIRVSGAEL 218 (405)
T ss_dssp EECSCSCCGGGSCSCHHHHHHHHHHTHHHHHCHHHHHHHTCCCCCCEEEESCSSSSHHHHHHHHHHHHTCEEEEEEGGGG
T ss_pred ccCCCCCCHHHhCCHHHHHHHHHHHHHHHHhCHHHHHhCCCCCCCceEEeCCCCCCHHHHHHHHHHhhCCCceEEEhHHh
Confidence 3344567789999999999999998876432 267788999999999999999999999999999999998776
Q ss_pred chhHHHhhccccccccCchhHHHHHHhhcCCCC-EEEEecccccCCCCCCCh-------hhHHHhhcChhhhhhhhhhcc
Q psy8969 418 SDVAEIKGHRRTYVGAMPGKVIQCMKKTKTENP-LVLIDEVDKIGKGYSGDP-------ASALLEMLDPEQNANFLDHYL 489 (1230)
Q Consensus 418 ~d~~~i~g~~~~~~g~~~g~i~~~~~~~~~~~p-villDEIDk~~~~~~~~~-------~~all~~ld~~q~~~f~d~~~ 489 (1230)
.+ .|+|+.+..|.+.|..|....| ||||||||.+++.+.... ...+.++|+. +|.+
T Consensus 219 ~s---------k~vGese~~vr~lF~~Ar~~aP~IIFiDEiDai~~~R~~~~~~~~~~~~~~l~~lL~~------lDg~- 282 (405)
T 4b4t_J 219 VQ---------KYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSTRVEGSGGGDSEVQRTMLELLNQ------LDGF- 282 (405)
T ss_dssp SC---------SSTTHHHHHHHHHHHHHHHTCSEEEEEESSSCCTTSCSCSSSGGGGHHHHHHHHHHHH------HHTT-
T ss_pred hc---------cccchHHHHHHHHHHHHHHhCCceEeeecchhhccCCCCCCCCCcHHHHHHHHHHHHh------hhcc-
Confidence 65 7999999999999999988877 778999999986542111 1122333221 1211
Q ss_pred CccccCCceEEEEecCCCCCCCHhhhc--ccc-eeecCCCCHHHHHHHHHHhh
Q psy8969 490 DVPVDLSRVLFICTANVIDTIPEPLRD--RME-MIDVSGYVAEEKVAIAAQYL 539 (1230)
Q Consensus 490 ~~~~d~s~v~~I~TaN~~~~I~~~L~~--R~~-~i~~~~~~~~e~~~i~~~~l 539 (1230)
-...+|++|+|||+++.||+||++ ||+ .|.++.++.++...|++.++
T Consensus 283 ---~~~~~V~vIaATNrpd~LDpAllRpGRfD~~I~i~lPd~~~R~~Il~~~~ 332 (405)
T 4b4t_J 283 ---ETSKNIKIIMATNRLDILDPALLRPGRIDRKIEFPPPSVAARAEILRIHS 332 (405)
T ss_dssp ---TCCCCEEEEEEESCSSSSCHHHHSTTSSCCEEECCCCCHHHHHHHHHHHH
T ss_pred ---CCCCCeEEEeccCChhhCCHhHcCCCcCceEEEcCCcCHHHHHHHHHHHh
Confidence 234689999999999999999998 998 57888888899999987665
No 12
>4b4t_H 26S protease regulatory subunit 7 homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=99.92 E-value=2.5e-25 Score=262.20 Aligned_cols=176 Identities=22% Similarity=0.335 Sum_probs=140.4
Q ss_pred HHHHhhhhcccccChHHHHHHHHHHHHHhh-------hcCCCCCceEEEeCCCCCCchHHHHHHHHHhCCCeEEEecCCc
Q psy8969 345 LTQAAKILDDDHYGMEDVKKRILEFIAVSQ-------LKGTTQGKILCFYGPPGVGKTSIAKSIARALNREYFRFSVGGM 417 (1230)
Q Consensus 345 ~~~~~~~l~~d~~G~~~vK~~i~e~l~~~~-------~~~~~~~~~llL~GPPG~GKTslak~iA~~l~~~~~~~~~~~~ 417 (1230)
+...-.+-.+|++|++++|+.|.+.+.... ..|...++++|||||||||||+||++||.+++.+|+.++.+.+
T Consensus 200 v~e~P~vt~~DIgGl~~~k~~L~e~V~~pl~~pe~f~~~Gi~pprGILLyGPPGTGKTlLAkAiA~e~~~~fi~vs~s~L 279 (467)
T 4b4t_H 200 VEEKPDVTYSDVGGCKDQIEKLREVVELPLLSPERFATLGIDPPKGILLYGPPGTGKTLCARAVANRTDATFIRVIGSEL 279 (467)
T ss_dssp EESSCSCCCSSCTTCHHHHHHHHHHTHHHHHCHHHHHHHTCCCCSEEEECSCTTSSHHHHHHHHHHHHTCEEEEEEGGGG
T ss_pred ecCCCCCCHHHhccHHHHHHHHHHHHHHHhcCHHHHHHCCCCCCCceEeeCCCCCcHHHHHHHHHhccCCCeEEEEhHHh
Confidence 344455678899999999999999886532 2367889999999999999999999999999999999998777
Q ss_pred chhHHHhhccccccccCchhHHHHHHhhcCCCC-EEEEecccccCCCCCCChh-------hHHHhhcChhhhhhhhhhcc
Q psy8969 418 SDVAEIKGHRRTYVGAMPGKVIQCMKKTKTENP-LVLIDEVDKIGKGYSGDPA-------SALLEMLDPEQNANFLDHYL 489 (1230)
Q Consensus 418 ~d~~~i~g~~~~~~g~~~g~i~~~~~~~~~~~p-villDEIDk~~~~~~~~~~-------~all~~ld~~q~~~f~d~~~ 489 (1230)
.+ .|+|+.+..++..|..|....| ||||||||.++..+..+.. ..++++|+. +|
T Consensus 280 ~s---------k~vGesek~ir~lF~~Ar~~aP~IIfiDEiDai~~~R~~~~~~~~~~~~~~l~~lL~~------lD--- 341 (467)
T 4b4t_H 280 VQ---------KYVGEGARMVRELFEMARTKKACIIFFDEIDAVGGARFDDGAGGDNEVQRTMLELITQ------LD--- 341 (467)
T ss_dssp CC---------CSSSHHHHHHHHHHHHHHHTCSEEEEEECCTTTSBCCSSSSCGGGGHHHHHHHHHHHH------HH---
T ss_pred hc---------ccCCHHHHHHHHHHHHHHhcCCceEeecccccccccccCcCCCccHHHHHHHHHHHHH------hh---
Confidence 66 7999999999999999998887 7889999999865432211 122222221 11
Q ss_pred CccccCCceEEEEecCCCCCCCHhhhc--ccce-eecCCCCHHHHHHHHHHhh
Q psy8969 490 DVPVDLSRVLFICTANVIDTIPEPLRD--RMEM-IDVSGYVAEEKVAIAAQYL 539 (1230)
Q Consensus 490 ~~~~d~s~v~~I~TaN~~~~I~~~L~~--R~~~-i~~~~~~~~e~~~i~~~~l 539 (1230)
.....++|++|+|||+++.||+||++ ||+. |.++.++.+++..|++.++
T Consensus 342 -g~~~~~~ViVIaATNrpd~LDpALlRpGRFD~~I~i~lPd~~~R~~Ilk~~l 393 (467)
T 4b4t_H 342 -GFDPRGNIKVMFATNRPNTLDPALLRPGRIDRKVEFSLPDLEGRANIFRIHS 393 (467)
T ss_dssp -SSCCTTTEEEEEECSCTTSBCHHHHSTTTCCEEECCCCCCHHHHHHHHHHHH
T ss_pred -ccCCCCcEEEEeCCCCcccCChhhhccccccEEEEeCCcCHHHHHHHHHHHh
Confidence 12335689999999999999999998 9984 7888888888888887665
No 13
>4b4t_I 26S protease regulatory subunit 4 homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=99.92 E-value=1.6e-25 Score=261.37 Aligned_cols=176 Identities=27% Similarity=0.357 Sum_probs=140.8
Q ss_pred HHHHhhhhcccccChHHHHHHHHHHHHHhhh-------cCCCCCceEEEeCCCCCCchHHHHHHHHHhCCCeEEEecCCc
Q psy8969 345 LTQAAKILDDDHYGMEDVKKRILEFIAVSQL-------KGTTQGKILCFYGPPGVGKTSIAKSIARALNREYFRFSVGGM 417 (1230)
Q Consensus 345 ~~~~~~~l~~d~~G~~~vK~~i~e~l~~~~~-------~~~~~~~~llL~GPPG~GKTslak~iA~~l~~~~~~~~~~~~ 417 (1230)
+.+...+-.+|++||+++|+.|.+.+..... .|...++++|||||||||||+||++||.+++.+|+.++.+.+
T Consensus 173 ~~~~p~v~~~DIgGld~~k~~L~e~v~~Pl~~pe~f~~~Gi~~prGvLLyGPPGTGKTlLAkAiA~e~~~~fi~v~~s~l 252 (437)
T 4b4t_I 173 MDKSPTESYSDIGGLESQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRIVGSEL 252 (437)
T ss_dssp EESSCCCCGGGTCSCHHHHHHHHHHHHHHHHCCHHHHHHTCCCCSEEEEESSTTTTHHHHHHHHHHHHTCEEEEEESGGG
T ss_pred eccCCCCcceecCcHHHHHHHHHHHHHHHHhCHHHHHhCCCCCCCCCceECCCCchHHHHHHHHHHHhCCCEEEEEHHHh
Confidence 3445567789999999999999998866432 367788999999999999999999999999999999998776
Q ss_pred chhHHHhhccccccccCchhHHHHHHhhcCCCC-EEEEecccccCCCCCC-----Ch--hhHHHhhcChhhhhhhhhhcc
Q psy8969 418 SDVAEIKGHRRTYVGAMPGKVIQCMKKTKTENP-LVLIDEVDKIGKGYSG-----DP--ASALLEMLDPEQNANFLDHYL 489 (1230)
Q Consensus 418 ~d~~~i~g~~~~~~g~~~g~i~~~~~~~~~~~p-villDEIDk~~~~~~~-----~~--~~all~~ld~~q~~~f~d~~~ 489 (1230)
.+ .|+|+.+..+...|..|....| ||||||||.++..+.. +. ...++++|+. +|.
T Consensus 253 ~s---------k~vGesek~ir~lF~~Ar~~aP~IIfiDEiDai~~~R~~~~~~~~~~~~~~l~~LL~~------lDg-- 315 (437)
T 4b4t_I 253 IQ---------KYLGDGPRLCRQIFKVAGENAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQ------LDG-- 315 (437)
T ss_dssp CC---------SSSSHHHHHHHHHHHHHHHTCSEEEEEEEESSSSCCCSCSSCSSCCHHHHHHHHHHHH------HHH--
T ss_pred hh---------ccCchHHHHHHHHHHHHHhcCCcEEEEehhhhhcccCCCCCCCccHHHHHHHHHHHHH------hhC--
Confidence 65 7999999999999999988877 7789999999865421 11 1233333321 111
Q ss_pred CccccCCceEEEEecCCCCCCCHhhhc--ccce-eecCCCCHHHHHHHHHHhh
Q psy8969 490 DVPVDLSRVLFICTANVIDTIPEPLRD--RMEM-IDVSGYVAEEKVAIAAQYL 539 (1230)
Q Consensus 490 ~~~~d~s~v~~I~TaN~~~~I~~~L~~--R~~~-i~~~~~~~~e~~~i~~~~l 539 (1230)
.-..++|++|+|||+++.||+||++ ||+. |.++.++.++...|++.++
T Consensus 316 --~~~~~~ViVIaATNrpd~LDpALlRpGRfD~~I~v~lPd~~~R~~Il~~~l 366 (437)
T 4b4t_I 316 --FDDRGDVKVIMATNKIETLDPALIRPGRIDRKILFENPDLSTKKKILGIHT 366 (437)
T ss_dssp --CCCSSSEEEEEEESCSTTCCTTSSCTTTEEEEECCCCCCHHHHHHHHHHHH
T ss_pred --cCCCCCEEEEEeCCChhhcCHHHhcCCceeEEEEcCCcCHHHHHHHHHHHh
Confidence 1234689999999999999999998 9984 7888888889889887765
No 14
>4b4t_M 26S protease regulatory subunit 6A; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=99.91 E-value=3.7e-25 Score=261.64 Aligned_cols=171 Identities=23% Similarity=0.356 Sum_probs=137.8
Q ss_pred HHhhhhcccccChHHHHHHHHHHHHHhhh-------cCCCCCceEEEeCCCCCCchHHHHHHHHHhCCCeEEEecCCcch
Q psy8969 347 QAAKILDDDHYGMEDVKKRILEFIAVSQL-------KGTTQGKILCFYGPPGVGKTSIAKSIARALNREYFRFSVGGMSD 419 (1230)
Q Consensus 347 ~~~~~l~~d~~G~~~vK~~i~e~l~~~~~-------~~~~~~~~llL~GPPG~GKTslak~iA~~l~~~~~~~~~~~~~d 419 (1230)
....+-.+|++|++++|+.|.+.+..... .|...++++|||||||||||+||++||..++.+|+.++.+.+.+
T Consensus 174 ~~p~~t~~digGl~~~k~~l~e~v~~pl~~pe~f~~~g~~~prGvLLyGPPGTGKTllAkAiA~e~~~~f~~v~~s~l~~ 253 (434)
T 4b4t_M 174 EKPTETYSDVGGLDKQIEELVEAIVLPMKRADKFKDMGIRAPKGALMYGPPGTGKTLLARACAAQTNATFLKLAAPQLVQ 253 (434)
T ss_dssp SSCSCCGGGSCSCHHHHHHHHHHTHHHHHCSHHHHHHCCCCCCEEEEESCTTSSHHHHHHHHHHHHTCEEEEEEGGGGCS
T ss_pred CCCCCChHhcCcHHHHHHHHHHHHHHHHhCHHHHHhCCCCCCCeeEEECcCCCCHHHHHHHHHHHhCCCEEEEehhhhhh
Confidence 34456789999999999999998765432 36778899999999999999999999999999999999877766
Q ss_pred hHHHhhccccccccCchhHHHHHHhhcCCCC-EEEEecccccCCCCCCChh----------hHHHhhcChhhhhhhhhhc
Q psy8969 420 VAEIKGHRRTYVGAMPGKVIQCMKKTKTENP-LVLIDEVDKIGKGYSGDPA----------SALLEMLDPEQNANFLDHY 488 (1230)
Q Consensus 420 ~~~i~g~~~~~~g~~~g~i~~~~~~~~~~~p-villDEIDk~~~~~~~~~~----------~all~~ld~~q~~~f~d~~ 488 (1230)
.|+|..+..+...|..+....| ||||||||.++..+.+... +.||..||.
T Consensus 254 ---------~~vGese~~ir~lF~~A~~~aP~IifiDEiDal~~~R~~~~~~~~~~~~~~~~~lL~~ldg---------- 314 (434)
T 4b4t_M 254 ---------MYIGEGAKLVRDAFALAKEKAPTIIFIDELDAIGTKRFDSEKSGDREVQRTMLELLNQLDG---------- 314 (434)
T ss_dssp ---------SCSSHHHHHHHHHHHHHHHHCSEEEEEECTHHHHCCCSSGGGGTTHHHHHHHHHHHHHHTT----------
T ss_pred ---------cccchHHHHHHHHHHHHHhcCCeEEeecchhhhhhccCCCCCCCchHHHHHHHHHHHHhhc----------
Confidence 7999999999999999988777 7789999999765432211 122322222
Q ss_pred cCccccCCceEEEEecCCCCCCCHhhhc--ccc-eeecCCCCHHHHHHHHHHhh
Q psy8969 489 LDVPVDLSRVLFICTANVIDTIPEPLRD--RME-MIDVSGYVAEEKVAIAAQYL 539 (1230)
Q Consensus 489 ~~~~~d~s~v~~I~TaN~~~~I~~~L~~--R~~-~i~~~~~~~~e~~~i~~~~l 539 (1230)
+ -..++|++|+|||+++.||+||++ ||+ .|.++.++.++...|++.++
T Consensus 315 --~-~~~~~ViVIaaTNrp~~LD~AllRpGRfD~~I~i~lPd~~~R~~Il~~~~ 365 (434)
T 4b4t_M 315 --F-SSDDRVKVLAATNRVDVLDPALLRSGRLDRKIEFPLPSEDSRAQILQIHS 365 (434)
T ss_dssp --S-CSSCSSEEEEECSSCCCCCTTTCSTTSEEEEEECCCCCHHHHHHHHHHHH
T ss_pred --c-CCCCCEEEEEeCCCchhcCHhHhcCCceeEEEEeCCcCHHHHHHHHHHHh
Confidence 1 223689999999999999999998 998 47888888888888887665
No 15
>4b4t_L 26S protease subunit RPT4; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=99.91 E-value=4.6e-25 Score=261.10 Aligned_cols=174 Identities=24% Similarity=0.378 Sum_probs=138.2
Q ss_pred HHhhhhcccccChHHHHHHHHHHHHHhhh-------cCCCCCceEEEeCCCCCCchHHHHHHHHHhCCCeEEEecCCcch
Q psy8969 347 QAAKILDDDHYGMEDVKKRILEFIAVSQL-------KGTTQGKILCFYGPPGVGKTSIAKSIARALNREYFRFSVGGMSD 419 (1230)
Q Consensus 347 ~~~~~l~~d~~G~~~vK~~i~e~l~~~~~-------~~~~~~~~llL~GPPG~GKTslak~iA~~l~~~~~~~~~~~~~d 419 (1230)
....+-.+|++|++++|+.|.+.+..... .|...++++|||||||||||+||++||..+|.+|+.++.+++.+
T Consensus 174 ~~p~v~~~digGl~~~k~~l~e~v~~pl~~p~~f~~~g~~~prGvLL~GPPGtGKTllAkAiA~e~~~~~~~v~~s~l~s 253 (437)
T 4b4t_L 174 EQGEITFDGIGGLTEQIRELREVIELPLKNPEIFQRVGIKPPKGVLLYGPPGTGKTLLAKAVAATIGANFIFSPASGIVD 253 (437)
T ss_dssp ESCSSCSGGGCSCHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCEEEEESCTTSSHHHHHHHHHHHHTCEEEEEEGGGTCC
T ss_pred cCCCCChhHhCChHHHHHHHHHHHHHHHhCHHHHHhCCCCCCCeEEEECCCCCcHHHHHHHHHHHhCCCEEEEehhhhcc
Confidence 34456689999999999999998876433 26788899999999999999999999999999999999887766
Q ss_pred hHHHhhccccccccCchhHHHHHHhhcCCCC-EEEEecccccCCCCCCCh-------hhHHHhhcChhhhhhhhhhccCc
Q psy8969 420 VAEIKGHRRTYVGAMPGKVIQCMKKTKTENP-LVLIDEVDKIGKGYSGDP-------ASALLEMLDPEQNANFLDHYLDV 491 (1230)
Q Consensus 420 ~~~i~g~~~~~~g~~~g~i~~~~~~~~~~~p-villDEIDk~~~~~~~~~-------~~all~~ld~~q~~~f~d~~~~~ 491 (1230)
+|+|..+..+...|..+....| ||||||||.++..+.++. ...+.++|. .+|.
T Consensus 254 ---------k~~Gese~~ir~~F~~A~~~~P~IifiDEiDai~~~R~~~~~~~~~~~~~~l~~lL~------~lDg---- 314 (437)
T 4b4t_L 254 ---------KYIGESARIIREMFAYAKEHEPCIIFMDEVDAIGGRRFSEGTSADREIQRTLMELLT------QMDG---- 314 (437)
T ss_dssp ---------SSSSHHHHHHHHHHHHHHHSCSEEEEEECCCSSSCCCSSSCCSSTTHHHHHHHHHHH------HHHS----
T ss_pred ---------ccchHHHHHHHHHHHHHHhcCCceeeeecccccccccccCCCCcchHHHHHHHHHHH------Hhhc----
Confidence 7999999999999999988877 778999999986542211 112222221 1111
Q ss_pred cccCCceEEEEecCCCCCCCHhhhcc--cc-eeecCCCCHHHHHHHHHHhh
Q psy8969 492 PVDLSRVLFICTANVIDTIPEPLRDR--ME-MIDVSGYVAEEKVAIAAQYL 539 (1230)
Q Consensus 492 ~~d~s~v~~I~TaN~~~~I~~~L~~R--~~-~i~~~~~~~~e~~~i~~~~l 539 (1230)
.-..++|+||+|||+++.||+||++| |+ .|.++.++.++...|++.++
T Consensus 315 ~~~~~~vivI~ATNrp~~LDpAllRpGRfD~~I~i~lPd~~~R~~Il~~~~ 365 (437)
T 4b4t_L 315 FDNLGQTKIIMATNRPDTLDPALLRPGRLDRKVEIPLPNEAGRLEIFKIHT 365 (437)
T ss_dssp SSCTTSSEEEEEESSTTSSCTTTTSTTSEEEEECCCCCCHHHHHHHHHHHH
T ss_pred ccCCCCeEEEEecCCchhhCHHHhCCCccceeeecCCcCHHHHHHHHHHHh
Confidence 12346899999999999999999985 87 57888888889999987765
No 16
>3hws_A ATP-dependent CLP protease ATP-binding subunit CL; CLPXP, AAA+ molecular machine, hexamer, asymmetric,, ATP-BIN chaperone, metal-binding; HET: ADP; 3.25A {Escherichia coli} PDB: 3hte_A
Probab=99.90 E-value=5.3e-24 Score=249.03 Aligned_cols=268 Identities=21% Similarity=0.307 Sum_probs=193.9
Q ss_pred cHHHHhhhhcccccChHHHHHHHHHHHHHhhhc---------CCCCCceEEEeCCCCCCchHHHHHHHHHhCCCeEEEec
Q psy8969 344 DLTQAAKILDDDHYGMEDVKKRILEFIAVSQLK---------GTTQGKILCFYGPPGVGKTSIAKSIARALNREYFRFSV 414 (1230)
Q Consensus 344 ~~~~~~~~l~~d~~G~~~vK~~i~e~l~~~~~~---------~~~~~~~llL~GPPG~GKTslak~iA~~l~~~~~~~~~ 414 (1230)
++...++.|++.++|++.+|+.|...+...... ....+..+||+||||||||++|++||+.++.+|+.+++
T Consensus 5 ~~~~l~~~l~~~i~G~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~vll~GppGtGKT~la~~ia~~~~~~~~~~~~ 84 (363)
T 3hws_A 5 TPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRNGDTSNGVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADA 84 (363)
T ss_dssp CHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHTTSCSSSCCCCCCCEEEECCTTSSHHHHHHHHHHHTTCCEEEEEH
T ss_pred CHHHHHHHHHhhccCHHHHHHHHHHHHHHHHhhhccccccccccCCCCeEEEECCCCCCHHHHHHHHHHHcCCCEEEech
Confidence 467788889999999999999999888532211 11245789999999999999999999999999999987
Q ss_pred CCcchhHHHhhccccccccC-chhHHHHHHhhc-----CCCCEEEEecccccCCCCCCC----------hhhHHHhhcC-
Q psy8969 415 GGMSDVAEIKGHRRTYVGAM-PGKVIQCMKKTK-----TENPLVLIDEVDKIGKGYSGD----------PASALLEMLD- 477 (1230)
Q Consensus 415 ~~~~d~~~i~g~~~~~~g~~-~g~i~~~~~~~~-----~~~pvillDEIDk~~~~~~~~----------~~~all~~ld- 477 (1230)
+.+.. ..|+|.. .+.+...+..+. ..+.||||||||++...+.+. ..++||++||
T Consensus 85 ~~l~~--------~~~~g~~~~~~~~~~~~~~~~~~~~~~~~vl~lDEid~l~~~~~~~~~~~~~~~~~~~~~Ll~~leg 156 (363)
T 3hws_A 85 TTLTE--------AGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDQIDKISRKSDNPSITRDVSGEGVQQALLKLIEG 156 (363)
T ss_dssp HHHTT--------CHHHHHHHTHHHHHHHHHTTTCHHHHHHCEEEEECHHHHCCCSSCC---CHHHHHHHHHHHHHHHHC
T ss_pred HHhcc--------cccccccHHHHHHHHHHHhhhhHHhcCCcEEEEeChhhhcccccccccccccchHHHHHHHHHHhcC
Confidence 64432 1255654 344445554431 235699999999998654332 6789999998
Q ss_pred -----hhhhhhhhhhccCccccCCceEEEEecCCC----------CC---------------------------------
Q psy8969 478 -----PEQNANFLDHYLDVPVDLSRVLFICTANVI----------DT--------------------------------- 509 (1230)
Q Consensus 478 -----~~q~~~f~d~~~~~~~d~s~v~~I~TaN~~----------~~--------------------------------- 509 (1230)
+.+...+.+...-+.+..+|++||+|+|.. ..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~i~tsn~~~i~~g~~~~l~~~i~~~~~~~~~~gf~~~~~~~~~~~~~~~l~~~v~~~~l~~ 236 (363)
T 3hws_A 157 TVAAVPPQGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAKSDKASEGELLAQVEPEDLIK 236 (363)
T ss_dssp C----------------CCCCCTTSSEEEEEECCTTHHHHHHHHHCCCC------------CCSCHHHHHHTCCHHHHHH
T ss_pred ceeeccCccccccCCCceEEEECCCceEEecCCcHHHHHHHHHhhhccccCCccccccccccchhhHHHHHhCCHHHHHH
Confidence 222333444444456788999999999863 22
Q ss_pred --CCHhhhcccceee-cCCCCHHHHHHHHHH---hhcchhHHhcCCCCCCcccCHHHHHHHHH-HhhhhhhHHHHHHHHH
Q psy8969 510 --IPEPLRDRMEMID-VSGYVAEEKVAIAAQ---YLIPQAMKESGLSPEQITLEPSAIQVLIK-NYCRESGVRNLQKHIE 582 (1230)
Q Consensus 510 --I~~~L~~R~~~i~-~~~~~~~e~~~i~~~---~l~~~~~~~~gl~~~~i~~~~~~~~~li~-~~~~e~gvR~l~~~i~ 582 (1230)
+.++|++||+++. +.+|+.++...|+.. +++.+..+..+.....+.++++++..|++ .|....|+|.|++.|+
T Consensus 237 ~~~~~~l~~R~~~~~~~~pl~~~~~~~I~~~~~~~l~~~~~~~~~~~~~~l~~~~~a~~~L~~~~~~~~~gaR~L~~~ie 316 (363)
T 3hws_A 237 FGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQALFNLEGVDLEFRDEALDAIAKKAMARKTGARGLRSIVE 316 (363)
T ss_dssp HTCCHHHHTTCCEEEECCCCCHHHHHHHHHSSTTCHHHHHHHHHHTTTCEEEECHHHHHHHHHHHHHTTCTTTTHHHHHH
T ss_pred cCCCHHHhcccCeeeecCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCceEEECHHHHHHHHHhhcCCccCchHHHHHHH
Confidence 7899999999765 788999999888875 24444443333334467899999999997 4999999999999999
Q ss_pred HHHHHHHHHHhhcCC-CceEechhhhhhhcCCCccccc
Q psy8969 583 KVTRKVALTIVKKES-DKVTVTNDNLSDFVGKPIFSHD 619 (1230)
Q Consensus 583 ~i~r~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~ 619 (1230)
.++.....++..... ..+.||.+.|++.+++..+..+
T Consensus 317 ~~~~~~l~~~~~~~~~~~~~I~~~~v~~~~~~~~~~~~ 354 (363)
T 3hws_A 317 AALLDTMYDLPSMEDVEKVVIDESVIDGQSEPLLIYGK 354 (363)
T ss_dssp HHHHHHHHSTTTCCCSEEEECHHHHTTCCSCCEEEC--
T ss_pred HHHHHHHHhcccccCCceeEEcHHHHhCcCCceeeccC
Confidence 999988777766544 5789999999999876665544
No 17
>3ljc_A ATP-dependent protease LA; LON N-domain, allosteric enzyme, ATP-binding, DNA-binding, H nucleotide-binding, serine protease, stress respo; 2.60A {Escherichia coli}
Probab=99.90 E-value=1.4e-23 Score=233.24 Aligned_cols=136 Identities=26% Similarity=0.421 Sum_probs=125.6
Q ss_pred ccCCcccceeeeccC---CcHHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHhccCCCCCCChhHHHHHHHhcCCCChHH
Q psy8969 134 NDDNFNDHKVSLVKD---LSEVYSALMQEVIKTVRDIISMNPLYKEQLMILLQQENSPVVDNPIYLADLGAALTGAEGTE 210 (1230)
Q Consensus 134 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 210 (1230)
..+.|+.+.|+.+++ .+.+.+||++.+++.|++|+++++.+++++...+. .++||++|||++|++++++.++
T Consensus 112 ~~~~~~~a~ve~l~d~~~~~~e~~al~~~l~~~~~~~~~l~~~~~~e~~~~~~-----~~~dp~~Lad~ia~~l~l~~~e 186 (252)
T 3ljc_A 112 DNGEHFSAKAEYLESPTIDEREQEVLVRTAISQFEGYIKLNKKIPPEVLTSLN-----SIDDPARLADTIAAHMPLKLAD 186 (252)
T ss_dssp EETTEEEEECCCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHTT-----SCCCHHHHHHHHHHTSCCCHHH
T ss_pred cCCCcEEEEEEeecCCCCCChHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHH-----ccCCHHHHHHHHHHhCCCCHHH
Confidence 345678888877764 34678999999999999999999999988877665 4899999999999999999999
Q ss_pred HHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Q psy8969 211 QQAILEEMDIPKRLMLSLSLLKKELELNKLQQKIGREVEEKVKQQHRKYILQEQLKAIKKELGL 274 (1230)
Q Consensus 211 ~~~~l~~~~~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~q~~~~l~eq~~~i~~elg~ 274 (1230)
||+|||+.|+.+||++++.+|.+|+++++++++|+++|+++|+|+|||||||||||+||+|||+
T Consensus 187 KQ~LLe~~d~~~Rl~~l~~lL~~e~e~~~l~~~I~~~v~~~~~k~Qrey~LrEQlk~IqkELGe 250 (252)
T 3ljc_A 187 KQSVLEMSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGE 250 (252)
T ss_dssp HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999999999999999999999999999999999999999999999999994
No 18
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=99.90 E-value=5.7e-24 Score=217.24 Aligned_cols=84 Identities=43% Similarity=0.848 Sum_probs=76.2
Q ss_pred CccCCC--CCCCCCCchhhhccccccCCCCcccCCcccccccccCchhhhhhc-ccccCCCCEeecccc--cCccccchh
Q psy8969 1136 NNVCPE--CKKTFSSAHHMKVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHI-RTHTGEKPYRCAHEF--CSKSFKTSG 1210 (1230)
Q Consensus 1136 py~C~~--CgK~F~s~s~Lk~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~-RtHTGEKPy~C~~e~--CGKsF~~ks 1210 (1230)
+|.|+. |++.|.+.+.|.+|+++|++++||+|++..|+++|.+.+.|.+|+ ++|++++||.|+ + ||+.|.++.
T Consensus 67 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~--~~~C~~~f~~~~ 144 (155)
T 2gli_A 67 PHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCK--LPGCTKRYTDPS 144 (155)
T ss_dssp CCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECC--STTTCCEESSHH
T ss_pred CccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCC--CCCCccccCCHH
Confidence 456874 999999999999999999999999995223999999999999998 899999999994 6 999999999
Q ss_pred hHHHHhhhccC
Q psy8969 1211 DLQKHVRTHTD 1221 (1230)
Q Consensus 1211 ~LkrH~R~HtG 1221 (1230)
+|.+|+++|+|
T Consensus 145 ~L~~H~~~hhg 155 (155)
T 2gli_A 145 SLRKHVKTVHG 155 (155)
T ss_dssp HHHHHHHHSCC
T ss_pred HHHHHHHhhcC
Confidence 99999999987
No 19
>3t15_A Ribulose bisphosphate carboxylase/oxygenase activ chloroplastic; photosynthesis, rubisco activase, AAA+ protein; 2.95A {Nicotiana tabacum} PDB: 3zw6_A
Probab=99.89 E-value=6.7e-24 Score=241.07 Aligned_cols=178 Identities=20% Similarity=0.253 Sum_probs=118.5
Q ss_pred hcccccChHHHHHHHHHHHHHhhh--cCCCCCceEEEeCCCCCCchHHHHHHHHHhCCCeEEEecCCcchhHHHhhcccc
Q psy8969 352 LDDDHYGMEDVKKRILEFIAVSQL--KGTTQGKILCFYGPPGVGKTSIAKSIARALNREYFRFSVGGMSDVAEIKGHRRT 429 (1230)
Q Consensus 352 l~~d~~G~~~vK~~i~e~l~~~~~--~~~~~~~~llL~GPPG~GKTslak~iA~~l~~~~~~~~~~~~~d~~~i~g~~~~ 429 (1230)
+++++|.-+.+.+.+...+....+ .+...+.++||+||||||||+||++||+.+|.+|++++++++.+ .
T Consensus 5 ~~~~~y~~~~~~~~~~~~~~k~~l~~~~~~~p~~lLl~GppGtGKT~la~aiA~~l~~~~i~v~~~~l~~---------~ 75 (293)
T 3t15_A 5 KLDGFYIAPAFMDKLVVHITKNFLKLPNIKVPLILGIWGGKGQGKSFQCELVFRKMGINPIMMSAGELES---------G 75 (293)
T ss_dssp EETTEECCHHHHHHHHHHHHHTTSCCTTCCCCSEEEEEECTTSCHHHHHHHHHHHHTCCCEEEEHHHHHC---------C
T ss_pred ccCcccCCHHHHHHHHHHHHHHHHhcCCCCCCeEEEEECCCCCCHHHHHHHHHHHhCCCEEEEeHHHhhh---------c
Confidence 556777544444444433333222 24556678999999999999999999999999999999765544 5
Q ss_pred ccccCchhHHHHHHhh-----cCCCCEEEEecccccCCCCCCChh---------hHHHhhcChhhhhhhhhhccCccccC
Q psy8969 430 YVGAMPGKVIQCMKKT-----KTENPLVLIDEVDKIGKGYSGDPA---------SALLEMLDPEQNANFLDHYLDVPVDL 495 (1230)
Q Consensus 430 ~~g~~~g~i~~~~~~~-----~~~~pvillDEIDk~~~~~~~~~~---------~all~~ld~~q~~~f~d~~~~~~~d~ 495 (1230)
|+|+.++.+.+.|..+ ...++||||||||++...+.+++. +.|+++||..+...+-..+ ...+.
T Consensus 76 ~~g~~~~~i~~~f~~a~~~~~~~~~~vl~iDEiD~~~~~~~~~~~~~~~~~~v~~~Ll~~ld~~~~~~~~~~~--~~~~~ 153 (293)
T 3t15_A 76 NAGEPAKLIRQRYREAAEIIRKGNMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMY--NKQEN 153 (293)
T ss_dssp ---HHHHHHHHHHHHHHHHHTTSSCCCEEEECCC--------------CHHHHHHHHHHHHHCCC-------------CC
T ss_pred cCchhHHHHHHHHHHHHHHHhcCCCeEEEEechhhhcCCCCCCccccchHHHHHHHHHHHhcccccccccccc--ccccC
Confidence 8899999999999888 455679999999999875554443 8899999854433221111 23456
Q ss_pred CceEEEEecCCCCCCCHhhhc--ccceeecCCCCHHHHHHHHHHhhcc
Q psy8969 496 SRVLFICTANVIDTIPEPLRD--RMEMIDVSGYVAEEKVAIAAQYLIP 541 (1230)
Q Consensus 496 s~v~~I~TaN~~~~I~~~L~~--R~~~i~~~~~~~~e~~~i~~~~l~~ 541 (1230)
++|+||+|||.++.||++|++ ||+.+.. -++.+++..|++.++.+
T Consensus 154 ~~v~vI~ttN~~~~ld~al~R~~R~d~~i~-~P~~~~r~~Il~~~~~~ 200 (293)
T 3t15_A 154 ARVPIIVTGNDFSTLYAPLIRDGRMEKFYW-APTREDRIGVCTGIFRT 200 (293)
T ss_dssp CCCCEEEECSSCCC--CHHHHHHHEEEEEE-CCCHHHHHHHHHHHHGG
T ss_pred CCcEEEEecCCcccCCHHHhCCCCCceeEe-CcCHHHHHHHHHHhccC
Confidence 889999999999999999995 9986443 34999999999987754
No 20
>1um8_A ATP-dependent CLP protease ATP-binding subunit CL; CLPP binding loop, chaperone; HET: ADP; 2.60A {Helicobacter pylori} SCOP: c.37.1.20
Probab=99.89 E-value=1e-22 Score=239.11 Aligned_cols=262 Identities=21% Similarity=0.279 Sum_probs=179.2
Q ss_pred cHHHHhhhhcccccChHHHHHHHHHHHHHh---hh---------------------cCCCCCceEEEeCCCCCCchHHHH
Q psy8969 344 DLTQAAKILDDDHYGMEDVKKRILEFIAVS---QL---------------------KGTTQGKILCFYGPPGVGKTSIAK 399 (1230)
Q Consensus 344 ~~~~~~~~l~~d~~G~~~vK~~i~e~l~~~---~~---------------------~~~~~~~~llL~GPPG~GKTslak 399 (1230)
++....+.|+++++|++++|+.|...+... .. .....+..+||+||||||||++|+
T Consensus 11 ~~~~l~~~L~~~viGq~~ak~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~~ill~Gp~GtGKT~la~ 90 (376)
T 1um8_A 11 APKELKAVLDNYVIGQEQAKKVFSVAVYNHYKRLSFKEKLKKQDNQDSNVELEHLEEVELSKSNILLIGPTGSGKTLMAQ 90 (376)
T ss_dssp CHHHHHHHHHTTCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHTTCCCCCEEEECCTTSSHHHHHH
T ss_pred CHHHHHHHHhhHccCcHHHHHHHHHHHHHHHHHHHhhhhhhhccccccccccccccccccCCCCEEEECCCCCCHHHHHH
Confidence 578889999999999999999998877310 00 112245679999999999999999
Q ss_pred HHHHHhCCCeEEEecCCcchhHHHhhccccccccCch-hHHHHHHhh-----cCCCCEEEEecccccCCCCCCC------
Q psy8969 400 SIARALNREYFRFSVGGMSDVAEIKGHRRTYVGAMPG-KVIQCMKKT-----KTENPLVLIDEVDKIGKGYSGD------ 467 (1230)
Q Consensus 400 ~iA~~l~~~~~~~~~~~~~d~~~i~g~~~~~~g~~~g-~i~~~~~~~-----~~~~pvillDEIDk~~~~~~~~------ 467 (1230)
+||+.++.+|+.+++..+.. ..|+|.... .+...+... ...+.||||||||++...+.+.
T Consensus 91 ~la~~l~~~~~~~~~~~~~~--------~~~~g~~~~~~~~~~~~~~~~~~~~~~~~vl~iDEi~~l~~~~~~~~~~~~~ 162 (376)
T 1um8_A 91 TLAKHLDIPIAISDATSLTE--------AGYVGEDVENILTRLLQASDWNVQKAQKGIVFIDEIDKISRLSENRSITRDV 162 (376)
T ss_dssp HHHHHTTCCEEEEEGGGCC----------------CTHHHHHHHHHTTTCHHHHTTSEEEEETGGGC-------------
T ss_pred HHHHHhCCCEEEecchhhhh--------cCcCCccHHHHHHHHHhhccchhhhcCCeEEEEcCHHHHhhhcCCCceeccc
Confidence 99999999999998766543 135555433 333333322 2356799999999997642221
Q ss_pred ----hhhHHHhhcCh------hhhhhhhhhccCccccCCceEEEEecCC-------------------------------
Q psy8969 468 ----PASALLEMLDP------EQNANFLDHYLDVPVDLSRVLFICTANV------------------------------- 506 (1230)
Q Consensus 468 ----~~~all~~ld~------~q~~~f~d~~~~~~~d~s~v~~I~TaN~------------------------------- 506 (1230)
..++|+.+||. .....+.+.+.-+.++.++++||+|+|.
T Consensus 163 ~~~~~~~~Ll~~le~~~~~~~~~~~~~~~~~~~~~i~t~n~~~I~~~~~~~l~~~l~~R~~~~~~g~~~~~~~~~~~~~~ 242 (376)
T 1um8_A 163 SGEGVQQALLKIVEGSLVNIPPKGGRKHPEGNFIQIDTSDILFICAGAFDGLAEIIKKRTTQNVLGFTQEKMSKKEQEAI 242 (376)
T ss_dssp -CHHHHHHHHHHHHCCEEC---------------CEECTTCEEEEEECCTTHHHHTTTSCSSCCCSCCCSSCCTTTTTTS
T ss_pred chHHHHHHHHHHhhccceecccccccccCCcceEEEecCCeEEEecCCHHHHHHHHHHHhcccccCCCchhhhccchhHH
Confidence 56889998873 2223333444445577899999999883
Q ss_pred ----------CCCCCHhhhccc-ceeecCCCCHHHHHHHHHH---hhcchhHHhcCCCCCCcccCHHHHHHHHHH-hhhh
Q psy8969 507 ----------IDTIPEPLRDRM-EMIDVSGYVAEEKVAIAAQ---YLIPQAMKESGLSPEQITLEPSAIQVLIKN-YCRE 571 (1230)
Q Consensus 507 ----------~~~I~~~L~~R~-~~i~~~~~~~~e~~~i~~~---~l~~~~~~~~gl~~~~i~~~~~~~~~li~~-~~~e 571 (1230)
...+.++|++|+ .+|.+.+++.++...|+.. .++.+..+........+.++++++..|++. |.++
T Consensus 243 ~~~~~~~~l~~~~~~p~l~~R~~~~i~~~~l~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~ 322 (376)
T 1um8_A 243 LHLVQTHDLVTYGLIPELIGRLPVLSTLDSISLEAMVDILQKPKNALIKQYQQLFKMDEVDLIFEEEAIKEIAQLALERK 322 (376)
T ss_dssp GGGCCHHHHHHTTCCHHHHTTCCEEEECCCCCHHHHHHHHHSSTTCHHHHHHHHHHTTTCEEEECHHHHHHHHHHHHHTT
T ss_pred HhhcCHHHHhhcCCChHHhcCCCceeeccCCCHHHHHHHHhhhHHHHHHHHHHHHhhcCceEEECHHHHHHHHHHhcccc
Confidence 113678999999 5789999999999998874 343332222222234678999999999987 6678
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhcCCCceEechhhhhhhcCC
Q psy8969 572 SGVRNLQKHIEKVTRKVALTIVKKESDKVTVTNDNLSDFVGK 613 (1230)
Q Consensus 572 ~gvR~l~~~i~~i~r~~~~~~~~~~~~~~~i~~~~~~~~~~~ 613 (1230)
+|+|.|++.|+.++...+.+........+.|+.+++.+.+++
T Consensus 323 ~~~R~L~~~le~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~ 364 (376)
T 1um8_A 323 TGARGLRAIIEDFCLDIMFDLPKLKGSEVRITKDCVLKQAEP 364 (376)
T ss_dssp CTGGGHHHHHHHHHHHHHHTGGGGTTSEEEECHHHHTTSSCC
T ss_pred cCcHHHHHHHHHHHHHHHhhccCCCCCEEEEeHHHhcCCCCc
Confidence 999999999999999887777665556788999999885543
No 21
>1ofh_A ATP-dependent HSL protease ATP-binding subunit HSLU; chaperone, hydrolase, ATP-binding; HET: ADP; 2.5A {Haemophilus influenzae} SCOP: c.37.1.20 PDB: 1ofi_A*
Probab=99.89 E-value=1.9e-22 Score=229.17 Aligned_cols=256 Identities=22% Similarity=0.348 Sum_probs=185.9
Q ss_pred ccHHHHhhhhcccccChHHHHHHHHHHHHHhhhc--------CCCCCceEEEeCCCCCCchHHHHHHHHHhCCCeEEEec
Q psy8969 343 LDLTQAAKILDDDHYGMEDVKKRILEFIAVSQLK--------GTTQGKILCFYGPPGVGKTSIAKSIARALNREYFRFSV 414 (1230)
Q Consensus 343 ~~~~~~~~~l~~d~~G~~~vK~~i~e~l~~~~~~--------~~~~~~~llL~GPPG~GKTslak~iA~~l~~~~~~~~~ 414 (1230)
++.......|+++++|++++++.|...+...+.. ....+..+||+||||||||++|++||+.++.+|+.+++
T Consensus 4 ~~~~~l~~~l~~~i~G~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~vll~G~~GtGKT~la~~la~~l~~~~~~i~~ 83 (310)
T 1ofh_A 4 MTPREIVSELDQHIIGQADAKRAVAIALRNRWRRMQLQEPLRHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEA 83 (310)
T ss_dssp CCHHHHHHHHHTTCCSCHHHHHHHHHHHHHHHHTTSSCHHHHHHCCCCCEEEECCTTSSHHHHHHHHHHHHTCCEEEEEG
T ss_pred CCHHHHHHHHhhhcCChHHHHHHHHHHHHHHHhhhhhcccccccCCCceEEEECCCCCCHHHHHHHHHHHhCCCEEEEcc
Confidence 5678889999999999999999999888642211 12346789999999999999999999999999999997
Q ss_pred CCcchhHHHhhccccccccCchh-HHHHHHhh-----c-CCCCEEEEecccccCCCCCC---Ch-----hhHHHhhcChh
Q psy8969 415 GGMSDVAEIKGHRRTYVGAMPGK-VIQCMKKT-----K-TENPLVLIDEVDKIGKGYSG---DP-----ASALLEMLDPE 479 (1230)
Q Consensus 415 ~~~~d~~~i~g~~~~~~g~~~g~-i~~~~~~~-----~-~~~pvillDEIDk~~~~~~~---~~-----~~all~~ld~~ 479 (1230)
+.+.+. .|+|...+. +...+..+ . ..+.||||||||++.....+ +. .+.|+++|+..
T Consensus 84 ~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~iDEi~~l~~~~~~~~~~~~~~~~~~~Ll~~le~~ 155 (310)
T 1ofh_A 84 TKFTEV--------GYVGKEVDSIIRDLTDSAGGAIDAVEQNGIVFIDEIDKICKKGEYSGADVSREGVQRDLLPLVEGS 155 (310)
T ss_dssp GGGSSC--------CSGGGSTTHHHHHHHHTTTTCHHHHHHHCEEEEECGGGGSCCSSCCSSHHHHHHHHHHHHHHHHCC
T ss_pred hhcccC--------CccCccHHHHHHHHHHHhhHHHhhccCCCEEEEEChhhcCccccccccchhHHHHHHHHHHHhcCC
Confidence 665441 355544333 22222211 0 12579999999999764321 11 45677776632
Q ss_pred hhhhhhhhccCccccCCceEEEEe----cCCCCCCCHhhhcccce-eecCCCCHHHHHHHHHH---hhcchh---HHhcC
Q psy8969 480 QNANFLDHYLDVPVDLSRVLFICT----ANVIDTIPEPLRDRMEM-IDVSGYVAEEKVAIAAQ---YLIPQA---MKESG 548 (1230)
Q Consensus 480 q~~~f~d~~~~~~~d~s~v~~I~T----aN~~~~I~~~L~~R~~~-i~~~~~~~~e~~~i~~~---~l~~~~---~~~~g 548 (1230)
. +...+. ..+.++++||+| +|.+..++++|++||.. |.+++|+.++...|+.+ .++.+. +...+
T Consensus 156 ~---~~~~~~--~~~~~~~~~i~~~~~~~~~~~~l~~~l~~R~~~~i~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~ 230 (310)
T 1ofh_A 156 T---VSTKHG--MVKTDHILFIASGAFQVARPSDLIPELQGRLPIRVELTALSAADFERILTEPHASLTEQYKALMATEG 230 (310)
T ss_dssp E---EEETTE--EEECTTCEEEEEECCSSSCGGGSCHHHHHTCCEEEECCCCCHHHHHHHHHSSTTCHHHHHHHHHHHTT
T ss_pred e---Eecccc--cccCCcEEEEEcCCcccCCcccCCHHHHhhCCceEEcCCcCHHHHHHHHHhhHHHHHHHHHHHHHhcC
Confidence 1 111111 345678999998 55778899999999974 89999999999999875 332222 22233
Q ss_pred CCCCCcccCHHHHHHHHHHhhh------hhhHHHHHHHHHHHHHHHHHHHhhcCCCceEechhhhhhhcCCC
Q psy8969 549 LSPEQITLEPSAIQVLIKNYCR------ESGVRNLQKHIEKVTRKVALTIVKKESDKVTVTNDNLSDFVGKP 614 (1230)
Q Consensus 549 l~~~~i~~~~~~~~~li~~~~~------e~gvR~l~~~i~~i~r~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 614 (1230)
. .+.++++++..|++..+. .+++|.|++.++.+++..+..........+.|+.+++.++++..
T Consensus 231 ~---~~~~~~~a~~~l~~~~~~~~~~~~~g~~R~l~~~l~~~~~~~~~~~~~~~~~~~~i~~~~v~~~l~~~ 299 (310)
T 1ofh_A 231 V---NIAFTTDAVKKIAEAAFRVNEKTENIGARRLHTVMERLMDKISFSASDMNGQTVNIDAAYVADALGEV 299 (310)
T ss_dssp C---EEEECHHHHHHHHHHHHHHHHHSCCCTTHHHHHHHHHHSHHHHHHGGGCTTCEEEECHHHHHHHTCSS
T ss_pred C---eeccCHHHHHHHHHHhhhhcccccccCcHHHHHHHHHHHHhhhcCCccccCCEEEEeeHHHHHHHHhh
Confidence 2 568999999999877655 68999999999999988877766555566789999999998754
No 22
>1z0w_A Putative protease LA homolog type; ATP-dependent protease, catalytic Ser-Lys DYAD, B-type LON, hydrolase; 1.20A {Archaeoglobus fulgidus} PDB: 1z0b_A 1z0c_A 1z0e_A 1z0g_A 1z0t_A 1z0v_A
Probab=99.88 E-value=7.2e-24 Score=227.12 Aligned_cols=149 Identities=30% Similarity=0.378 Sum_probs=125.7
Q ss_pred cCCCCceEEeeeeeeecc-CC-------------c--ceEEEec--------------cccccccCCCCcccccccccCC
Q psy8969 623 EITPPGVVTRKVALTIVK-KE-------------S--DKVTVTN--------------DNLSDFVGKPIFSHDRLFEITP 672 (1230)
Q Consensus 623 ~~~~~g~~~~~~~~~~~~-~~-------------~--~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~ 672 (1230)
+...+|+++|+ +|+... +. . +.+.++| +.++...+ -.|...++|++++
T Consensus 8 ~~~~vg~v~gl-a~~g~~~g~~l~Iev~v~~s~g~~~p~~~~~G~~~~~~~es~~~v~a~l~~~~g-~~~~~~di~vnl~ 85 (207)
T 1z0w_A 8 EGYEVGRVNGL-AVIGESAGIVLPIIAEVTPSMSKSEGRVIATGRLQEIAREAVMNVSAIIKKYTG-RDISNMDVHIQFV 85 (207)
T ss_dssp SSEETTEEEEE-EEETTTEEEEEEEEEEEEECC---CCCEECCSTTHHHHHHHHHHHHHHHHHHHC-CCGGGEEEEEEES
T ss_pred CCCceEEEEEE-EEECCCCcEEEEEEEEEEecCCCCCCeEEEeCCchhhhHHHHHHHHHHHHHhcC-CCCCCceEEEEEe
Confidence 34578999994 776552 22 1 4566665 22222222 2455668999999
Q ss_pred CcceeeeeccccCcCCCCCchhHHHHHHHHHhhhCCCCCcCceeeeeEEEeeeEeecCCchHHHHHHHHcCcceeecCcc
Q psy8969 673 PGVVMGLAWTAMAVKKDGPSAGITITTALVSLATGKPIKQNLAMTGEISLVGKVLPVGGIKEKTIAAKRVGVHTILMPEE 752 (1230)
Q Consensus 673 ~g~~~~~~~~~~~~pkdgpsag~~~~~a~~s~~~~~~v~~~~amtgeitl~g~v~~iGG~kek~~aa~r~gi~~vi~p~~ 752 (1230)
+|. +||||||||+||++||+|+++++|+++++||||||+|+|+|+||||+++|+++|+|+|+++||+|.+
T Consensus 86 ~g~----------~~k~GpsadLaia~AilSa~~~~p~~~~~a~tGEl~L~G~VrpV~Gi~~ki~~A~~~G~~~viiP~~ 155 (207)
T 1z0w_A 86 GTY----------EGVEGDSASISIATAVISAIEGIPVDQSVAMTGSLSVKGEVLPVGGVTQKIEAAIQAGLKKVIIPKD 155 (207)
T ss_dssp SCC----------TTEECCTTBHHHHHHHHHHHHTCCEETTEEECCEECTTSBEECCSCHHHHHHHHHHTTCSEEEEEGG
T ss_pred ccc----------ccccCCcchHHHHHHHHHHcCCCCCCCCEEEEEEECCCceEEeeCCHHHHHHHHHHcCCCEEEechh
Confidence 987 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCchhhHhhccceecccchhhhhhccc
Q psy8969 753 NKKDFTDLPEYIREGLNVHFVSEWRQVYDLVF 784 (1230)
Q Consensus 753 N~kDl~elPe~vr~~l~i~fvs~~~eVl~ia~ 784 (1230)
|.+++. +|+.+..+++++++++..+++..++
T Consensus 156 N~~e~~-~~~~~~~~i~v~~v~~l~ea~~~l~ 186 (207)
T 1z0w_A 156 NIDDVL-LDAEHEGKIEVIPVSRINEVLEHVL 186 (207)
T ss_dssp GGGGCC-CCTTTTTSSEEEEESBHHHHHHHHB
T ss_pred hhhhhc-cchhccCCcEEEEcCCHHHHHHHHh
Confidence 999988 8888889999999999999999876
No 23
>1r6b_X CLPA protein; AAA+, N-terminal domain, CLPS, crystal, binding mechanism, hydrolase; HET: ADP; 2.25A {Escherichia coli} SCOP: a.174.1.1 c.37.1.20 c.37.1.20 PDB: 1ksf_X*
Probab=99.87 E-value=2.7e-21 Score=247.24 Aligned_cols=294 Identities=20% Similarity=0.350 Sum_probs=212.8
Q ss_pred HhcCCCChhHHHHHHHHHHHhccCCCCCCccch----hhhHHHHhhcCCCCCcc-cccccHHHHhhhhcccccChHHHHH
Q psy8969 290 IKDKKVPPPVMEVLNEELAKLGFLESHSSEFNV----TRNYLDWLTSLPWGIQS-EENLDLTQAAKILDDDHYGMEDVKK 364 (1230)
Q Consensus 290 ~~~~~~~~~~~~~~~~e~~~l~~~~~~~~e~~v----~~~yl~~~~~lpw~~~~-~~~~~~~~~~~~l~~d~~G~~~vK~ 364 (1230)
+....+|+.+.+.+.+-..+....+.......| +...+..++.+||...+ .+...+....+.|+++++|++.+++
T Consensus 389 i~~~~lp~~~i~lld~a~~~~~~~~~~~~~~~v~~~di~~~~~~~~~ip~~~~~~~~~~~l~~l~~~l~~~v~g~~~~~~ 468 (758)
T 1r6b_X 389 INDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIE 468 (758)
T ss_dssp CTTSCTTHHHHHHHHHHHHHHHHSSSCCCCCSCCHHHHHHHHHHHSCCCCCCSSSSHHHHHHHHHHHHTTTSCSCHHHHH
T ss_pred cccccCchHHHHHHHHHHHHHhcccccccCCccCHHHHHHHHHHhcCCCccccchhHHHHHHHHHHHHHhhccCHHHHHH
Confidence 445567888887776544443322222222233 56677777899998765 4455678889999999999999999
Q ss_pred HHHHHHHHhhh--cCCCCC-ceEEEeCCCCCCchHHHHHHHHHhCCCeEEEecCCcch---hHHHhhccccccccCchh-
Q psy8969 365 RILEFIAVSQL--KGTTQG-KILCFYGPPGVGKTSIAKSIARALNREYFRFSVGGMSD---VAEIKGHRRTYVGAMPGK- 437 (1230)
Q Consensus 365 ~i~e~l~~~~~--~~~~~~-~~llL~GPPG~GKTslak~iA~~l~~~~~~~~~~~~~d---~~~i~g~~~~~~g~~~g~- 437 (1230)
.|...+..... ....++ ..+||+||||||||++|++||+.++.+|++++++...+ .+.+.|+...|+|...+.
T Consensus 469 ~l~~~i~~~~~g~~~~~~p~~~~ll~G~~GtGKT~la~~la~~l~~~~~~i~~s~~~~~~~~~~l~g~~~g~~g~~~~~~ 548 (758)
T 1r6b_X 469 ALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL 548 (758)
T ss_dssp HHHHHHHHHHTTCSCTTSCSEEEEEECSTTSSHHHHHHHHHHHHTCEEEEEEGGGCSSSSCCSSSCCCCSCSHHHHHTTH
T ss_pred HHHHHHHHHhcccCCCCCCceEEEEECCCCCcHHHHHHHHHHHhcCCEEEEechhhcchhhHhhhcCCCCCCcCccccch
Confidence 99988754322 111222 36999999999999999999999999999999876654 234455555566654333
Q ss_pred HHHHHHhhcCCCCEEEEecccccCCCCCCChhhHHHhhcChhhhhhhhhhccCccccCCceEEEEecCCCC---------
Q psy8969 438 VIQCMKKTKTENPLVLIDEVDKIGKGYSGDPASALLEMLDPEQNANFLDHYLDVPVDLSRVLFICTANVID--------- 508 (1230)
Q Consensus 438 i~~~~~~~~~~~pvillDEIDk~~~~~~~~~~~all~~ld~~q~~~f~d~~~~~~~d~s~v~~I~TaN~~~--------- 508 (1230)
+..++.. ....||||||||++. .+..+.|+++||.. .+.|. .+..+|+++++||+|+|...
T Consensus 549 l~~~~~~--~~~~vl~lDEi~~~~----~~~~~~Ll~~le~~---~~~~~-~g~~~~~~~~~iI~tsN~~~~~~~~~~~g 618 (758)
T 1r6b_X 549 LTDAVIK--HPHAVLLLDEIEKAH----PDVFNILLQVMDNG---TLTDN-NGRKADFRNVVLVMTTNAGVRETERKSIG 618 (758)
T ss_dssp HHHHHHH--CSSEEEEEETGGGSC----HHHHHHHHHHHHHS---EEEET-TTEEEECTTEEEEEEECSSCC--------
T ss_pred HHHHHHh--CCCcEEEEeCccccC----HHHHHHHHHHhcCc---EEEcC-CCCEEecCCeEEEEecCcchhhhhhcccC
Confidence 3344433 335699999999974 45788999998853 23333 36678889999999999854
Q ss_pred ----------------CCCHhhhccc-ceeecCCCCHHHHHHHHHHhhc--chhHHhcCCCCCCcccCHHHHHHHHH-Hh
Q psy8969 509 ----------------TIPEPLRDRM-EMIDVSGYVAEEKVAIAAQYLI--PQAMKESGLSPEQITLEPSAIQVLIK-NY 568 (1230)
Q Consensus 509 ----------------~I~~~L~~R~-~~i~~~~~~~~e~~~i~~~~l~--~~~~~~~gl~~~~i~~~~~~~~~li~-~~ 568 (1230)
.++++|++|| .+|.+++++.++...|+..++- .+.+...++ .+.++++++..|++ .|
T Consensus 619 ~~~~~~~~~~~~~~~~~~~~~l~~R~~~~i~~~~l~~~~~~~i~~~~l~~~~~~~~~~~~---~~~~~~~a~~~l~~~~~ 695 (758)
T 1r6b_X 619 LIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGV---SLEVSQEARNWLAEKGY 695 (758)
T ss_dssp ---------CHHHHHHHSCHHHHTTCSEEEECCCCCHHHHHHHHHHHHHHHHHHHHHTTE---EEEECHHHHHHHHHHHC
T ss_pred ccccchHHHHHHHHHHhcCHHHHhhCCcceeeCCCCHHHHHHHHHHHHHHHHHHHHHCCc---EEEeCHHHHHHHHHhCC
Confidence 6889999999 5789999999999999988764 222333322 47899999999986 46
Q ss_pred hhhhhHHHHHHHHHHHHHH-HHHHHhhcC
Q psy8969 569 CRESGVRNLQKHIEKVTRK-VALTIVKKE 596 (1230)
Q Consensus 569 ~~e~gvR~l~~~i~~i~r~-~~~~~~~~~ 596 (1230)
....|+|.|++.|+.++.. .+..++.+.
T Consensus 696 ~~~~g~R~l~~~i~~~~~~~l~~~~l~~~ 724 (758)
T 1r6b_X 696 DRAMGARPMARVIQDNLKKPLANELLFGS 724 (758)
T ss_dssp BTTTBTTTHHHHHHHHHTHHHHHHHHHST
T ss_pred CcCCCchHHHHHHHHHHHHHHHHHHHcCc
Confidence 6788999999999998876 666666543
No 24
>1xhk_A Putative protease LA homolog; LON protease, ATP dependent, catalytic DYAD, hydrolase; HET: MES; 1.90A {Methanocaldococcus jannaschii} SCOP: d.14.1.10
Probab=99.87 E-value=3.2e-23 Score=219.39 Aligned_cols=109 Identities=33% Similarity=0.528 Sum_probs=101.3
Q ss_pred CcccccccccCCCcceeeeeccccCcCCCCCchhHHHHHHHHHhhhCCCCCcCceeeeeEEEeeeEeecCCchHHHHHHH
Q psy8969 661 IFSHDRLFEITPPGVVMGLAWTAMAVKKDGPSAGITITTALVSLATGKPIKQNLAMTGEISLVGKVLPVGGIKEKTIAAK 740 (1230)
Q Consensus 661 ~~~~~~~~~~~~~g~~~~~~~~~~~~pkdgpsag~~~~~a~~s~~~~~~v~~~~amtgeitl~g~v~~iGG~kek~~aa~ 740 (1230)
.|...++|+|+++|+ +||||||||+||++||+|+++++|+++++||||||+|+|+|+||||++||+++|+
T Consensus 76 ~~~~~di~vn~~~g~----------~~k~GpsadLaia~AilSa~~~~p~~~~~a~tGEl~L~G~V~pV~Gi~~ki~~A~ 145 (187)
T 1xhk_A 76 DLNNKEIYIQFSQSY----------SKIDGDSATAAVCLAIISALLDIPLKQDFAITGSLDLSGNVLAIGGVNEKIEAAK 145 (187)
T ss_dssp CSTTEEEEEEESSCC----------CTTTGGGGHHHHHHHHHHHHHTCCBCSSEEECCEECTTCBEECCSCHHHHHHHHH
T ss_pred CCCCeeEEEEECCCC----------cCCcCchHHHHHHHHHHHHccCCCCCCCEEEEEEECCCceEEeeCCHHHHHHHHH
Confidence 345568899999987 9999999999999999999999999999999999999999999999999999999
Q ss_pred HcCcceeecCccccccccCchhhHhhccceecccchhhhhhccc
Q psy8969 741 RVGVHTILMPEENKKDFTDLPEYIREGLNVHFVSEWRQVYDLVF 784 (1230)
Q Consensus 741 r~gi~~vi~p~~N~kDl~elPe~vr~~l~i~fvs~~~eVl~ia~ 784 (1230)
|+|+++||+|.+|.+++. +..++++++++++.|++..++
T Consensus 146 ~~G~~~viiP~~N~~e~~-----~~~~i~v~~v~~l~ea~~~l~ 184 (187)
T 1xhk_A 146 RYGFKRVIIPEANMIDVI-----ETEGIEIIPVKTLDEIVPLVF 184 (187)
T ss_dssp HTTCSEEEEEGGGGGGCC-----CCCSSEEEEESBHHHHHHHHB
T ss_pred HcCCCEEEeccchhhhhc-----ccCCcEEEEcCCHHHHHHHHh
Confidence 999999999999999876 346899999999999998775
No 25
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=99.86 E-value=4.7e-22 Score=202.99 Aligned_cols=84 Identities=25% Similarity=0.478 Sum_probs=65.4
Q ss_pred CceecCCCccCccccChhhHHHHHh---hccCCCCccccc---cccccccCCchhHhhhhccccCCCCccCCC--CCccc
Q psy8969 820 KPYVCGEAGCDKSFASATNYKNHMR---IHSGEKPYVCQV---RDCQKRFTEYSSLYKHTLVHSDIRPFICDR--CPRSY 891 (1230)
Q Consensus 820 kpy~C~~~~Cgk~F~~~s~L~~H~r---~Htgekpy~C~~---~~C~k~F~~~~~L~~H~~~H~~ekpy~C~~--Cgk~F 891 (1230)
.+|.|.. |++.|.+...|..|++ +|++++||.|.+ ..|++.|.+...|..|+++|++++||.|+. |++.|
T Consensus 2 ~~~~C~~--C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f 79 (155)
T 2gli_A 2 TDCRWDG--CSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSY 79 (155)
T ss_dssp CBCCBTT--CCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCC
T ss_pred CcCCcCC--CccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcc
Confidence 4566666 7777777777777766 566667777653 235689999999999999999999999985 99999
Q ss_pred CChhhHHhHHhhhc
Q psy8969 892 RQLCTLNVHKKTNH 905 (1230)
Q Consensus 892 ~~~~~L~~H~k~hh 905 (1230)
.+...|..|++.|+
T Consensus 80 ~~~~~l~~H~~~h~ 93 (155)
T 2gli_A 80 SRLENLKTHLRSHT 93 (155)
T ss_dssp SSHHHHHHHHHHTT
T ss_pred cCHHHHHHHHHHcC
Confidence 99999999988764
No 26
>1xwi_A SKD1 protein; VPS4B, AAA ATPase, protein transport; 2.80A {Homo sapiens}
Probab=99.85 E-value=1.7e-20 Score=215.96 Aligned_cols=210 Identities=20% Similarity=0.290 Sum_probs=152.1
Q ss_pred hhcccccChHHHHHHHHHHHHHhhhc------CCCCCceEEEeCCCCCCchHHHHHHHHHh-CCCeEEEecCCcchhHHH
Q psy8969 351 ILDDDHYGMEDVKKRILEFIAVSQLK------GTTQGKILCFYGPPGVGKTSIAKSIARAL-NREYFRFSVGGMSDVAEI 423 (1230)
Q Consensus 351 ~l~~d~~G~~~vK~~i~e~l~~~~~~------~~~~~~~llL~GPPG~GKTslak~iA~~l-~~~~~~~~~~~~~d~~~i 423 (1230)
+-.+|++|++++|+.|.+.+...... +..+++++||+||||||||+||++||+.+ +.+|+.++...+..
T Consensus 9 ~~~~di~G~~~~k~~l~~~v~~p~~~~~~~~~~~~~~~~iLL~GppGtGKT~la~ala~~~~~~~~~~i~~~~l~~---- 84 (322)
T 1xwi_A 9 VKWSDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILLFGPPGTGKSYLAKAVATEANNSTFFSISSSDLVS---- 84 (322)
T ss_dssp CCGGGSCSCHHHHHHHHHHHHHHHHCGGGSCTTCCCCSEEEEESSSSSCHHHHHHHHHHHTTSCEEEEEECCSSCC----
T ss_pred CCHHHhcCHHHHHHHHHHHHHHHHhCHHHHhCCCCCCceEEEECCCCccHHHHHHHHHHHcCCCcEEEEEhHHHHh----
Confidence 44589999999999999988654322 23456889999999999999999999999 89999999876654
Q ss_pred hhccccccccCchhHHHHHHhhcCCCC-EEEEecccccCCCCCCChhhHHHhhcChhhhhhhhhhccCccccCCceEEEE
Q psy8969 424 KGHRRTYVGAMPGKVIQCMKKTKTENP-LVLIDEVDKIGKGYSGDPASALLEMLDPEQNANFLDHYLDVPVDLSRVLFIC 502 (1230)
Q Consensus 424 ~g~~~~~~g~~~g~i~~~~~~~~~~~p-villDEIDk~~~~~~~~~~~all~~ld~~q~~~f~d~~~~~~~d~s~v~~I~ 502 (1230)
.|+|.....+...|..+...+| ||||||||.+...+......+...++ ..|+..+.++..+..+|+||+
T Consensus 85 -----~~~g~~~~~~~~lf~~a~~~~~~vl~iDEid~l~~~~~~~~~~~~~~~~-----~~ll~~ld~~~~~~~~v~vI~ 154 (322)
T 1xwi_A 85 -----KWLGESEKLVKNLFQLARENKPSIIFIDEIDSLCGSRSENESEAARRIK-----TEFLVQMQGVGVDNDGILVLG 154 (322)
T ss_dssp -----SSCCSCHHHHHHHHHHHHHTSSEEEEEETTTGGGCCSSSCCTTHHHHHH-----HHHHHHHHCSSSCCTTEEEEE
T ss_pred -----hhhhHHHHHHHHHHHHHHhcCCcEEEeecHHHhccccccccchHHHHHH-----HHHHHHHhcccccCCCEEEEE
Confidence 5889988999999988876665 88999999997654333222222111 123333333334567899999
Q ss_pred ecCCCCCCCHhhhcccc-eeecCCCCHHHHHHHHHHhhcchhHHhcCCCCCCcccCHHHHHHHHHHhhhhhhHHHHHHHH
Q psy8969 503 TANVIDTIPEPLRDRME-MIDVSGYVAEEKVAIAAQYLIPQAMKESGLSPEQITLEPSAIQVLIKNYCRESGVRNLQKHI 581 (1230)
Q Consensus 503 TaN~~~~I~~~L~~R~~-~i~~~~~~~~e~~~i~~~~l~~~~~~~~gl~~~~i~~~~~~~~~li~~~~~e~gvR~l~~~i 581 (1230)
|||.++.|+++|++||+ +|.++.++.++...|++.++- . ....+++..+..|++ .|.+..-+.|+..+
T Consensus 155 atn~~~~ld~al~rRf~~~i~i~~P~~~~r~~il~~~l~-----~-----~~~~l~~~~l~~la~-~t~G~sgadl~~l~ 223 (322)
T 1xwi_A 155 ATNIPWVLDSAIRRRFEKRIYIPLPEPHARAAMFKLHLG-----T-----TQNSLTEADFRELGR-KTDGYSGADISIIV 223 (322)
T ss_dssp EESCTTTSCHHHHHTCCEEEECCCCCHHHHHHHHHHHHT-----T-----CCBCCCHHHHHHHHH-TCTTCCHHHHHHHH
T ss_pred ecCCcccCCHHHHhhcCeEEEeCCcCHHHHHHHHHHHHh-----c-----CCCCCCHHHHHHHHH-HcCCCCHHHHHHHH
Confidence 99999999999999996 678888899999888877652 1 123456777777764 34443345554444
Q ss_pred HHHH
Q psy8969 582 EKVT 585 (1230)
Q Consensus 582 ~~i~ 585 (1230)
...+
T Consensus 224 ~~A~ 227 (322)
T 1xwi_A 224 RDAL 227 (322)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4433
No 27
>3cf2_A TER ATPase, transitional endoplasmic reticulum ATPase, valosi; AAA, CDC48, ERAD, transport protein; HET: ADP ANP; 3.50A {Mus musculus} PDB: 3cf1_A* 3cf3_A* 1r7r_A*
Probab=99.85 E-value=2.3e-22 Score=253.37 Aligned_cols=213 Identities=24% Similarity=0.378 Sum_probs=144.4
Q ss_pred hhhcccccChHHHHHHHHHHHHHhhhc-------CCCCCceEEEeCCCCCCchHHHHHHHHHhCCCeEEEecCCcchhHH
Q psy8969 350 KILDDDHYGMEDVKKRILEFIAVSQLK-------GTTQGKILCFYGPPGVGKTSIAKSIARALNREYFRFSVGGMSDVAE 422 (1230)
Q Consensus 350 ~~l~~d~~G~~~vK~~i~e~l~~~~~~-------~~~~~~~llL~GPPG~GKTslak~iA~~l~~~~~~~~~~~~~d~~~ 422 (1230)
++-++|++|++++|+.|.+.+.+.... +...++++|||||||||||++|++||.+++.+|+.++.+.+.+
T Consensus 473 ~v~w~diggl~~~k~~l~e~v~~p~~~p~~f~~~g~~~~~gvLl~GPPGtGKT~lAkaiA~e~~~~f~~v~~~~l~s--- 549 (806)
T 3cf2_A 473 QVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLT--- 549 (806)
T ss_dssp CCCSTTCCSCHHHHHHHTTTTTTTTTCSGGGSSSCCCCCSCCEEESSTTSSHHHHHHHHHHTTTCEEEECCHHHHHT---
T ss_pred CCCHHHhCCHHHHHHHHHHHHHhhhhCHHHHHhcCCCCCceEEEecCCCCCchHHHHHHHHHhCCceEEeccchhhc---
Confidence 345689999999999999988654322 4567789999999999999999999999999999987655444
Q ss_pred HhhccccccccCchhHHHHHHhhcCCCC-EEEEecccccCCCCCC---Ch-------hhHHHhhcChhhhhhhhhhccCc
Q psy8969 423 IKGHRRTYVGAMPGKVIQCMKKTKTENP-LVLIDEVDKIGKGYSG---DP-------ASALLEMLDPEQNANFLDHYLDV 491 (1230)
Q Consensus 423 i~g~~~~~~g~~~g~i~~~~~~~~~~~p-villDEIDk~~~~~~~---~~-------~~all~~ld~~q~~~f~d~~~~~ 491 (1230)
+|+|+.+..|++.|..|+...| ||||||||.+...+.+ +. .+.||..||. +
T Consensus 550 ------~~vGese~~vr~lF~~Ar~~~P~IifiDEiDsl~~~R~~~~~~~~~~~~rv~~~lL~~mdg------------~ 611 (806)
T 3cf2_A 550 ------MWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDG------------M 611 (806)
T ss_dssp ------TTCSSCHHHHHHHHHHHHTTCSEEEECSCGGGCC--------------CHHHHHHHHHHHS------------S
T ss_pred ------cccchHHHHHHHHHHHHHHcCCceeechhhhHHhhccCCCCCCCchHHHHHHHHHHHHHhC------------C
Confidence 7999999999999999988766 8889999999865421 11 1333333332 1
Q ss_pred cccCCceEEEEecCCCCCCCHhhhc--ccc-eeecCCCCHHHHHHHHHHhhcchhHHhcCCCCCCc-ccCHHHHHHHHHH
Q psy8969 492 PVDLSRVLFICTANVIDTIPEPLRD--RME-MIDVSGYVAEEKVAIAAQYLIPQAMKESGLSPEQI-TLEPSAIQVLIKN 567 (1230)
Q Consensus 492 ~~d~s~v~~I~TaN~~~~I~~~L~~--R~~-~i~~~~~~~~e~~~i~~~~l~~~~~~~~gl~~~~i-~~~~~~~~~li~~ 567 (1230)
-...+|++|+|||+++.||+||++ ||+ .|.++.++.++...|++.++ .+.-...+++.+.+ ..+++...+.|.+
T Consensus 612 -~~~~~V~vi~aTN~p~~lD~AllRpgRfd~~i~v~lPd~~~R~~il~~~l-~~~~~~~~~dl~~la~~t~g~SGadi~~ 689 (806)
T 3cf2_A 612 -STKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANL-RKSPVAKDVDLEFLAKMTNGFSGADLTE 689 (806)
T ss_dssp -CSSSSEEEECC-CCSSSSCHHHHSTTTSCCEEEC-----CHHHHTTTTTS-SCC--CCC----------------CHHH
T ss_pred -CCCCCEEEEEeCCCchhCCHhHcCCCcceEEEEECCcCHHHHHHHHHHHh-cCCCCCCCCCHHHHHHhCCCCCHHHHHH
Confidence 134689999999999999999999 998 46777777777777776655 33222333444444 4556777788899
Q ss_pred hhhhhhHHHHHHHHHHHH
Q psy8969 568 YCRESGVRNLQKHIEKVT 585 (1230)
Q Consensus 568 ~~~e~gvR~l~~~i~~i~ 585 (1230)
.|++|.+..+++.++...
T Consensus 690 l~~~A~~~a~r~~~~~~~ 707 (806)
T 3cf2_A 690 ICQRACKLAIRESIESEI 707 (806)
T ss_dssp HHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHHHHHHhhh
Confidence 999999999998877644
No 28
>3pxi_A Negative regulator of genetic competence CLPC/MEC; CLPB, proteolysis, CLPX, HSP100/CLP, AAA+ proteins, PR binding; 6.93A {Bacillus subtilis}
Probab=99.85 E-value=4.4e-21 Score=245.16 Aligned_cols=256 Identities=19% Similarity=0.270 Sum_probs=177.8
Q ss_pred ccchhhhHHHHhhcCCCCCccccc-ccHHHHhhhhcccccChHHHHHHHHHHHHHhhhc--CCCCCc-eEEEeCCCCCCc
Q psy8969 319 EFNVTRNYLDWLTSLPWGIQSEEN-LDLTQAAKILDDDHYGMEDVKKRILEFIAVSQLK--GTTQGK-ILCFYGPPGVGK 394 (1230)
Q Consensus 319 e~~v~~~yl~~~~~lpw~~~~~~~-~~~~~~~~~l~~d~~G~~~vK~~i~e~l~~~~~~--~~~~~~-~llL~GPPG~GK 394 (1230)
....+...+...+.+||.....+. -.+...+..|+++++|++.+++.|.+.+...... ...++. .+||+|||||||
T Consensus 455 ~~~~i~~~v~~~~~ip~~~~~~~~~~~l~~l~~~l~~~viGq~~a~~~l~~~i~~~~~~~~~~~~p~~~~Ll~Gp~GtGK 534 (758)
T 3pxi_A 455 TVDDIAMVVSSWTGVPVSKIAQTETDKLLNMENILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGK 534 (758)
T ss_dssp CTHHHHHHHHTTC-------CHHHHSCC-CHHHHHHTTSCSCHHHHHHHHHHHHHHTTTCSCTTSCSEEEEEESCTTSSH
T ss_pred CHHHHHHHHHHHhCCChHHhhHHHHHHHHHHHHHHhCcCcChHHHHHHHHHHHHHHHcccCCCCCCceEEEEECCCCCCH
Confidence 334566777778899998765543 3466778889999999999999999988654322 222232 599999999999
Q ss_pred hHHHHHHHHHh---CCCeEEEecCCcchhHHHhhccccccccCchhHHHHHHhhcCCCCEEEEecccccCCCCCCChhhH
Q psy8969 395 TSIAKSIARAL---NREYFRFSVGGMSDVAEIKGHRRTYVGAMPGKVIQCMKKTKTENPLVLIDEVDKIGKGYSGDPASA 471 (1230)
Q Consensus 395 Tslak~iA~~l---~~~~~~~~~~~~~d~~~i~g~~~~~~g~~~g~i~~~~~~~~~~~pvillDEIDk~~~~~~~~~~~a 471 (1230)
|++|++||+.+ +.+|++++++...+. +..+ .|.+..++.. ....||||||||++. .+..+.
T Consensus 535 T~lA~ala~~l~~~~~~~i~i~~s~~~~~---------~~~~-~~~l~~~~~~--~~~~vl~lDEi~~~~----~~~~~~ 598 (758)
T 3pxi_A 535 TELARALAESIFGDEESMIRIDMSEYMEK---------HSTS-GGQLTEKVRR--KPYSVVLLDAIEKAH----PDVFNI 598 (758)
T ss_dssp HHHHHHHHHHHHSCTTCEEEEEGGGGCSS---------CCCC----CHHHHHH--CSSSEEEEECGGGSC----HHHHHH
T ss_pred HHHHHHHHHHhcCCCcceEEEechhcccc---------cccc-cchhhHHHHh--CCCeEEEEeCccccC----HHHHHH
Confidence 99999999998 688999998766552 2221 2333334333 235699999999984 467889
Q ss_pred HHhhcChhhhhhhhhhccCccccCCceEEEEecCCCCC------------CCHhhhccc-ceeecCCCCHHHHHHHHHHh
Q psy8969 472 LLEMLDPEQNANFLDHYLDVPVDLSRVLFICTANVIDT------------IPEPLRDRM-EMIDVSGYVAEEKVAIAAQY 538 (1230)
Q Consensus 472 ll~~ld~~q~~~f~d~~~~~~~d~s~v~~I~TaN~~~~------------I~~~L~~R~-~~i~~~~~~~~e~~~i~~~~ 538 (1230)
|+++||... +.+ ..+..++..+++||+|||.... ++|+|++|| .+|.+++++.++...|+..+
T Consensus 599 Ll~~le~g~---~~~-~~g~~~~~~~~~iI~ttn~~~~~~~~~~~~~~~~f~p~l~~Rl~~~i~~~~l~~~~~~~i~~~~ 674 (758)
T 3pxi_A 599 LLQVLEDGR---LTD-SKGRTVDFRNTILIMTSNVGASEKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLTEIVSLM 674 (758)
T ss_dssp HHHHHHHSB---CC------CCBCTTCEEEEEESSSTTCCHHHHHHHHHHSCHHHHTTSSEEEECC--CHHHHHHHHHHH
T ss_pred HHHHhccCe---EEc-CCCCEeccCCeEEEEeCCCChhhHHHHHHHHHhhCCHHHHhhCCeEEecCCCCHHHHHHHHHHH
Confidence 999998633 222 2345678899999999997554 799999999 58899999999999999887
Q ss_pred hcchhHHhcCCCCCCcccCHHHHHHHHHH-hhhhhhHHHHHHHHHHHHHH-HHHHHhhc
Q psy8969 539 LIPQAMKESGLSPEQITLEPSAIQVLIKN-YCRESGVRNLQKHIEKVTRK-VALTIVKK 595 (1230)
Q Consensus 539 l~~~~~~~~gl~~~~i~~~~~~~~~li~~-~~~e~gvR~l~~~i~~i~r~-~~~~~~~~ 595 (1230)
+ .+..++.+-....+.++++++..|++. |....|+|.|++.|+..+.. .+..++.+
T Consensus 675 l-~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~R~L~~~i~~~v~~~l~~~~l~~ 732 (758)
T 3pxi_A 675 S-DQLTKRLKEQDLSIELTDAAKAKVAEEGVDLEYGARPLRRAIQKHVEDRLSEELLRG 732 (758)
T ss_dssp H-HHHHHHHHTTTCEEEECHHHHHHHHGGGCCTTTTTTTHHHHHHHHTHHHHHHHHHTT
T ss_pred H-HHHHHHHHhCCCeEEECHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHHHHcC
Confidence 6 223222222234678999999999865 99999999999999976654 45555543
No 29
>4fcw_A Chaperone protein CLPB; AAA domain; HET: ADP; 2.35A {Thermus thermophilus} PDB: 4fcv_A* 4fd2_A* 4fct_A*
Probab=99.84 E-value=2.1e-20 Score=212.82 Aligned_cols=237 Identities=21% Similarity=0.324 Sum_probs=176.6
Q ss_pred cHHHHhhhhcccccChHHHHHHHHHHHHHhhh--cCCCCC-ceEEEeCCCCCCchHHHHHHHHHh---CCCeEEEecCCc
Q psy8969 344 DLTQAAKILDDDHYGMEDVKKRILEFIAVSQL--KGTTQG-KILCFYGPPGVGKTSIAKSIARAL---NREYFRFSVGGM 417 (1230)
Q Consensus 344 ~~~~~~~~l~~d~~G~~~vK~~i~e~l~~~~~--~~~~~~-~~llL~GPPG~GKTslak~iA~~l---~~~~~~~~~~~~ 417 (1230)
.+...++.|.++++|++.+++.|...+..... ....++ ..++|+||||||||++|++||+.+ +.+|+.++++..
T Consensus 7 ~l~~l~~~l~~~i~G~~~~~~~l~~~i~~~~~~~~~~~~~~~~~ll~G~~GtGKt~la~~la~~~~~~~~~~~~~~~~~~ 86 (311)
T 4fcw_A 7 KLLRLEEELHKRVVGQDEAIRAVADAIRRARAGLKDPNRPIGSFLFLGPTGVGKTELAKTLAATLFDTEEAMIRIDMTEY 86 (311)
T ss_dssp HHHTHHHHHHTTCCSCHHHHHHHHHHHHHHHHTCSCTTSCSEEEEEESCSSSSHHHHHHHHHHHHHSCGGGEEEEEGGGC
T ss_pred HHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhcCCCCCCCCceEEEEECCCCcCHHHHHHHHHHHHcCCCcceEEeecccc
Confidence 45677888999999999999999998865432 222233 479999999999999999999998 567999988766
Q ss_pred ch---hHHHhhccccccccCc-hhHHHHHHhhcCCCCEEEEecccccCCCCCCChhhHHHhhcChhhhhhhhhhccCccc
Q psy8969 418 SD---VAEIKGHRRTYVGAMP-GKVIQCMKKTKTENPLVLIDEVDKIGKGYSGDPASALLEMLDPEQNANFLDHYLDVPV 493 (1230)
Q Consensus 418 ~d---~~~i~g~~~~~~g~~~-g~i~~~~~~~~~~~pvillDEIDk~~~~~~~~~~~all~~ld~~q~~~f~d~~~~~~~ 493 (1230)
.+ ...+.|....|+|... +.+..++..+ ...||||||||++.. +..+.|+++|+.... .+ ..+..+
T Consensus 87 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~--~~~vl~lDEi~~l~~----~~~~~Ll~~le~~~~---~~-~~~~~~ 156 (311)
T 4fcw_A 87 MEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRR--PYSVILFDAIEKAHP----DVFNILLQMLDDGRL---TD-SHGRTV 156 (311)
T ss_dssp CSTTHHHHHHCCCTTSTTTTTCCHHHHHHHHC--SSEEEEEETGGGSCH----HHHHHHHHHHHHSEE---EC-TTSCEE
T ss_pred cccccHHHhcCCCCccccccccchHHHHHHhC--CCeEEEEeChhhcCH----HHHHHHHHHHhcCEE---Ec-CCCCEE
Confidence 54 4456666666666654 5555555432 245999999999843 457888888875332 22 234568
Q ss_pred cCCceEEEEecCC--------------------------CCCCCHhhhcccc-eeecCCCCHHHHHHHHHHhhcchhHHh
Q psy8969 494 DLSRVLFICTANV--------------------------IDTIPEPLRDRME-MIDVSGYVAEEKVAIAAQYLIPQAMKE 546 (1230)
Q Consensus 494 d~s~v~~I~TaN~--------------------------~~~I~~~L~~R~~-~i~~~~~~~~e~~~i~~~~l~~~~~~~ 546 (1230)
++++++||+|||. ...++++|++||. ++.+.+++.++...|+..++ .+....
T Consensus 157 ~~~~~iiI~ttn~~~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~R~~~~~~~~p~~~~~~~~i~~~~l-~~~~~~ 235 (311)
T 4fcw_A 157 DFRNTVIIMTSNLGSPLILEGLQKGWPYERIRDEVFKVLQQHFRPEFLNRLDEIVVFRPLTKEQIRQIVEIQM-SYLRAR 235 (311)
T ss_dssp ECTTEEEEEEESTTHHHHHTTTTSCCCSSTHHHHTHHHHHHHSCHHHHTTCSEEEECCCCCHHHHHHHHHHHT-HHHHHH
T ss_pred ECCCcEEEEecccCHHHHHhhhcccccHHHHHHHHHHHHHHhCCHHHHhcCCeEEEeCCCCHHHHHHHHHHHH-HHHHHH
Confidence 8899999999999 5578999999995 67888899999988888766 334333
Q ss_pred cCCCCCCcccCHHHHHHHHHH-hhhhhhHHHHHHHHHHHHHHHHHH
Q psy8969 547 SGLSPEQITLEPSAIQVLIKN-YCRESGVRNLQKHIEKVTRKVALT 591 (1230)
Q Consensus 547 ~gl~~~~i~~~~~~~~~li~~-~~~e~gvR~l~~~i~~i~r~~~~~ 591 (1230)
.+.....+.++++++..|.+. |...+|+|.|++.++.++......
T Consensus 236 ~~~~~~~~~~~~~~~~~l~~~~~~~~gn~R~L~~~i~~~~~~~~~~ 281 (311)
T 4fcw_A 236 LAEKRISLELTEAAKDFLAERGYDPVFGARPLRRVIQRELETPLAQ 281 (311)
T ss_dssp HHTTTCEEEECHHHHHHHHHHSCBTTTBTTTHHHHHHHHTHHHHHH
T ss_pred HHhCCcEEEeCHHHHHHHHHhCCCccCCchhHHHHHHHHHHHHHHH
Confidence 332234678999999999874 545899999999999988754433
No 30
>3cf2_A TER ATPase, transitional endoplasmic reticulum ATPase, valosi; AAA, CDC48, ERAD, transport protein; HET: ADP ANP; 3.50A {Mus musculus} PDB: 3cf1_A* 3cf3_A* 1r7r_A*
Probab=99.84 E-value=3.5e-21 Score=242.61 Aligned_cols=210 Identities=20% Similarity=0.349 Sum_probs=151.3
Q ss_pred hhhcccccChHHHHHHHHHHHHHhhhc-------CCCCCceEEEeCCCCCCchHHHHHHHHHhCCCeEEEecCCcchhHH
Q psy8969 350 KILDDDHYGMEDVKKRILEFIAVSQLK-------GTTQGKILCFYGPPGVGKTSIAKSIARALNREYFRFSVGGMSDVAE 422 (1230)
Q Consensus 350 ~~l~~d~~G~~~vK~~i~e~l~~~~~~-------~~~~~~~llL~GPPG~GKTslak~iA~~l~~~~~~~~~~~~~d~~~ 422 (1230)
.+-.+|++|++++|+.|.+.+...... +...+++||||||||||||+|||+||.++|.+|+.++...+.+
T Consensus 200 ~v~~~dIgGl~~~~~~l~e~v~~pl~~p~~f~~~g~~~p~GILL~GPPGTGKT~LAraiA~elg~~~~~v~~~~l~s--- 276 (806)
T 3cf2_A 200 EVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMS--- 276 (806)
T ss_dssp SCCGGGCCSCCTTHHHHHHHHHHHHHCCGGGTSCCCCCCCEEEEECCTTSCHHHHHHHHHTTTTCEEEEEEHHHHHS---
T ss_pred CCChhhhcCHHHHHHHHHHHHHHHccCHHHHhhcCCCCCCeEEEECCCCCCHHHHHHHHHHHhCCeEEEEEhHHhhc---
Confidence 345589999999999999998663322 5567899999999999999999999999999999998644333
Q ss_pred HhhccccccccCchhHHHHHHhhcCCCC-EEEEecccccCCCCCC---Chh----hHHHhhcChhhhhhhhhhccCcccc
Q psy8969 423 IKGHRRTYVGAMPGKVIQCMKKTKTENP-LVLIDEVDKIGKGYSG---DPA----SALLEMLDPEQNANFLDHYLDVPVD 494 (1230)
Q Consensus 423 i~g~~~~~~g~~~g~i~~~~~~~~~~~p-villDEIDk~~~~~~~---~~~----~all~~ld~~q~~~f~d~~~~~~~d 494 (1230)
.|+|.....+...|..|....| ||||||||.++..+.+ +.. +.||..+|. + ..
T Consensus 277 ------k~~gese~~lr~lF~~A~~~~PsIIfIDEiDal~~~r~~~~~~~~~riv~~LL~~mdg---------~----~~ 337 (806)
T 3cf2_A 277 ------KLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDG---------L----KQ 337 (806)
T ss_dssp ------SCTTHHHHHHHHHHHHHTTSCSEEEEEESGGGTCCTTTTCCCTTHHHHHHHHHTHHHH---------C----CG
T ss_pred ------ccchHHHHHHHHHHHHHHHcCCeEEEEehhcccccccCCCCChHHHHHHHHHHHHHhc---------c----cc
Confidence 6899999999999999988777 8889999999865422 221 233333332 1 12
Q ss_pred CCceEEEEecCCCCCCCHhhhc--ccc-eeecCCCCHHHHHHHHHHhhcchhHHhcCCCCCCc-ccCHHHHHHHHHHhhh
Q psy8969 495 LSRVLFICTANVIDTIPEPLRD--RME-MIDVSGYVAEEKVAIAAQYLIPQAMKESGLSPEQI-TLEPSAIQVLIKNYCR 570 (1230)
Q Consensus 495 ~s~v~~I~TaN~~~~I~~~L~~--R~~-~i~~~~~~~~e~~~i~~~~l~~~~~~~~gl~~~~i-~~~~~~~~~li~~~~~ 570 (1230)
..+|++|+|||+++.||++|++ ||+ .|.++.++.++...|++.++-. .-...+++...+ ..+.+.....+...++
T Consensus 338 ~~~V~VIaaTN~~d~LD~ALrR~GRFd~~I~i~~Pd~~~R~~IL~~~l~~-~~~~~dvdl~~lA~~T~GfsgaDL~~Lv~ 416 (806)
T 3cf2_A 338 RAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKN-MKLADDVDLEQVANETHGHVGADLAALCS 416 (806)
T ss_dssp GGCEEEEEECSSTTTSCTTTTSTTSSCEEEECCCCCHHHHHHHHHHTCSS-SEECTTCCHHHHHHHCCSCCHHHHHHHHH
T ss_pred cCCEEEEEecCChhhcCHHHhCCcccceEEecCCCCHHHHHHHHHHHhcC-CCCCcccCHHHHHHhcCCCCHHHHHHHHH
Confidence 3579999999999999999999 998 5899999999999998876532 211111211111 1122223344555666
Q ss_pred hhhHHHHHHHHH
Q psy8969 571 ESGVRNLQKHIE 582 (1230)
Q Consensus 571 e~gvR~l~~~i~ 582 (1230)
+|.++.++|.+.
T Consensus 417 eA~~~A~~r~~~ 428 (806)
T 3cf2_A 417 EAALQAIRKKMD 428 (806)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHhccc
Confidence 776666666544
No 31
>1qzm_A ATP-dependent protease LA; oligomerization domain, AAA+ protein, hydrolase; 1.90A {Escherichia coli} SCOP: c.37.1.20
Probab=99.83 E-value=5.4e-21 Score=177.05 Aligned_cols=93 Identities=35% Similarity=0.644 Sum_probs=89.2
Q ss_pred CCCCHHHHHHHHHHhhcchhHHhcCCCCCCcccCHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhh-cCCCceEe
Q psy8969 524 SGYVAEEKVAIAAQYLIPQAMKESGLSPEQITLEPSAIQVLIKNYCRESGVRNLQKHIEKVTRKVALTIVK-KESDKVTV 602 (1230)
Q Consensus 524 ~~~~~~e~~~i~~~~l~~~~~~~~gl~~~~i~~~~~~~~~li~~~~~e~gvR~l~~~i~~i~r~~~~~~~~-~~~~~~~i 602 (1230)
+|||.+||+.||++||+|++++++||+++++.++++++..||+.||||+|||+|+|.|++||||+|++++. +....+.|
T Consensus 1 sGYt~~EK~~IAk~~LiPkql~~~GL~~~~~~i~d~al~~iI~~YTREaGVRnLer~i~~i~RK~a~~i~~~~~~~~v~v 80 (94)
T 1qzm_A 1 SGYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREAGVRGLEREISKLCRKAVKQLLLDKSLKHIEI 80 (94)
T ss_dssp CCCCHHHHHHHHHHTHHHHHHHHTTCCTTTEEECHHHHHHHHHHHCCCSSSHHHHHHHHHHHHHHHHHHHTCTTCCCEEE
T ss_pred CCCCHHHHHHHHHHhccHHHHHHhCCChhhceECHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHcCCCCCeeE
Confidence 58999999999999999999999999999999999999999999999999999999999999999999996 55667999
Q ss_pred chhhhhhhcCCCcc
Q psy8969 603 TNDNLSDFVGKPIF 616 (1230)
Q Consensus 603 ~~~~~~~~~~~~~~ 616 (1230)
+.++|.+|||+|+|
T Consensus 81 ~~~~l~~~LG~~~f 94 (94)
T 1qzm_A 81 NGDNLHDYLGVQRF 94 (94)
T ss_dssp CTTTTHHHHCSCCC
T ss_pred CHHHHHHHcCCCCC
Confidence 99999999999986
No 32
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=99.83 E-value=3.8e-21 Score=187.15 Aligned_cols=116 Identities=34% Similarity=0.773 Sum_probs=109.5
Q ss_pred CCCCCCCCCCCCCCCCccChhHHHhhhhcccCCCceecCCCccCccccChhhHHHHHhhccCCCCccccccccccccCCc
Q psy8969 787 TSERPFPCPVLGCDRSFTTSNIRKVHIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEY 866 (1230)
Q Consensus 787 t~ekp~~C~~~~C~k~F~~~~~L~~H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~~~~C~k~F~~~ 866 (1230)
+++++|.|.+.+|++.|.....|..|+++|+++++|.|....|++.|.+...|..|++.|++++||.|.. |++.|.+.
T Consensus 2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~ 79 (119)
T 2jp9_A 2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKT--CQRKFSRS 79 (119)
T ss_dssp CSSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTT--TCCEESCH
T ss_pred CCCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCc--cCchhCCH
Confidence 5789999986679999999999999999999999999982239999999999999999999999999986 99999999
Q ss_pred hhHhhhhccccCCCCccC--CCCCcccCChhhHHhHHhhh
Q psy8969 867 SSLYKHTLVHSDIRPFIC--DRCPRSYRQLCTLNVHKKTN 904 (1230)
Q Consensus 867 ~~L~~H~~~H~~ekpy~C--~~Cgk~F~~~~~L~~H~k~h 904 (1230)
..|..|+++|++++||.| +.|++.|.+.+.|..|+++|
T Consensus 80 ~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H 119 (119)
T 2jp9_A 80 DHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119 (119)
T ss_dssp HHHHHHHHHHHTCCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred HHHHHHHHHhcCCCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence 999999999999999999 89999999999999999986
No 33
>3syl_A Protein CBBX; photosynthesis, rubisco activase, AAA+ protein, calvin cycle chaperone; 3.00A {Rhodobacter sphaeroides} PDB: 3syk_A 3zuh_A*
Probab=99.83 E-value=2.3e-20 Score=212.57 Aligned_cols=219 Identities=21% Similarity=0.307 Sum_probs=164.8
Q ss_pred ccccHHHHhhhhcccccChHHHHHHHHHHHHHhhh---------cCCCCCceEEEeCCCCCCchHHHHHHHHHhCC----
Q psy8969 341 ENLDLTQAAKILDDDHYGMEDVKKRILEFIAVSQL---------KGTTQGKILCFYGPPGVGKTSIAKSIARALNR---- 407 (1230)
Q Consensus 341 ~~~~~~~~~~~l~~d~~G~~~vK~~i~e~l~~~~~---------~~~~~~~~llL~GPPG~GKTslak~iA~~l~~---- 407 (1230)
...++..+...|+++++|++++|+.|.+++..... .....+..+||+||||||||++|++||+.++.
T Consensus 18 ~~~~~~~~~~~l~~~i~G~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~vll~G~~GtGKT~la~~la~~l~~~~~~ 97 (309)
T 3syl_A 18 EGSGAKEVLEELDRELIGLKPVKDRIRETAALLLVERARQKLGLAHETPTLHMSFTGNPGTGKTTVALKMAGLLHRLGYV 97 (309)
T ss_dssp HHTTHHHHHHHHHHHSSSCHHHHHHHHHHHHHHHHHHHHHHHTCCSSCCCCEEEEEECTTSSHHHHHHHHHHHHHHTTSS
T ss_pred ccccHHHHHHHHHHHccChHHHHHHHHHHHHHHHhHHHHHHcCCCCCCCCceEEEECCCCCCHHHHHHHHHHHHHhcCCc
Confidence 34568888999999999999999999988764321 12344567999999999999999999999844
Q ss_pred ---CeEEEecCCcchhHHHhhccccccccCchhHHHHHHhhcCCCCEEEEecccccCCCCC-----CChhhHHHhhcChh
Q psy8969 408 ---EYFRFSVGGMSDVAEIKGHRRTYVGAMPGKVIQCMKKTKTENPLVLIDEVDKIGKGYS-----GDPASALLEMLDPE 479 (1230)
Q Consensus 408 ---~~~~~~~~~~~d~~~i~g~~~~~~g~~~g~i~~~~~~~~~~~pvillDEIDk~~~~~~-----~~~~~all~~ld~~ 479 (1230)
+|+.++...+.. .|+|...+.+...|..+ .+.||||||||.+..... .+..+.|+.+|+..
T Consensus 98 ~~~~~~~~~~~~l~~---------~~~g~~~~~~~~~~~~~--~~~vl~iDEid~l~~~~~~~~~~~~~~~~Ll~~l~~~ 166 (309)
T 3syl_A 98 RKGHLVSVTRDDLVG---------QYIGHTAPKTKEVLKRA--MGGVLFIDEAYYLYRPDNERDYGQEAIEILLQVMENN 166 (309)
T ss_dssp SSCCEEEECGGGTCC---------SSTTCHHHHHHHHHHHH--TTSEEEEETGGGSCCCC---CCTHHHHHHHHHHHHHC
T ss_pred CCCcEEEEcHHHhhh---------hcccccHHHHHHHHHhc--CCCEEEEEChhhhccCCCcccccHHHHHHHHHHHhcC
Confidence 888887654432 46676667777777665 457999999999975432 12235556555431
Q ss_pred hhhhhhhhccCccccCCceEEEEecCCCC-----CCCHhhhccc-ceeecCCCCHHHHHHHHHHhhcchhHHhcCCCCCC
Q psy8969 480 QNANFLDHYLDVPVDLSRVLFICTANVID-----TIPEPLRDRM-EMIDVSGYVAEEKVAIAAQYLIPQAMKESGLSPEQ 553 (1230)
Q Consensus 480 q~~~f~d~~~~~~~d~s~v~~I~TaN~~~-----~I~~~L~~R~-~~i~~~~~~~~e~~~i~~~~l~~~~~~~~gl~~~~ 553 (1230)
..+++||+|+|... .++++|++|| .+|.++.|+.++...|+..++-. . .
T Consensus 167 ---------------~~~~~~i~~~~~~~~~~~~~~~~~l~~R~~~~i~~~~~~~~~~~~il~~~l~~-----~-----~ 221 (309)
T 3syl_A 167 ---------------RDDLVVILAGYADRMENFFQSNPGFRSRIAHHIEFPDYSDEELFEIAGHMLDD-----Q-----N 221 (309)
T ss_dssp ---------------TTTCEEEEEECHHHHHHHHHHSTTHHHHEEEEEEECCCCHHHHHHHHHHHHHH-----T-----T
T ss_pred ---------------CCCEEEEEeCChHHHHHHHhhCHHHHHhCCeEEEcCCcCHHHHHHHHHHHHHH-----c-----C
Confidence 24788999998643 3579999999 78999999999999998887632 2 3
Q ss_pred cccCHHHHHHHHHHh------hhhhhHHHHHHHHHHHHHHHHHHHhhc
Q psy8969 554 ITLEPSAIQVLIKNY------CRESGVRNLQKHIEKVTRKVALTIVKK 595 (1230)
Q Consensus 554 i~~~~~~~~~li~~~------~~e~gvR~l~~~i~~i~r~~~~~~~~~ 595 (1230)
+.++++++..+.+.+ ...+++|.|++.++.++...+..++..
T Consensus 222 ~~~~~~~~~~l~~~~~~~~~~~~~gn~r~l~~~l~~a~~~~~~r~~~~ 269 (309)
T 3syl_A 222 YQMTPEAETALRAYIGLRRNQPHFANARSIRNALDRARLRQANRLFTA 269 (309)
T ss_dssp CEECHHHHHHHHHHHHHHTTSSSCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCHHHHHHHHHHHHHhccCCCCCcHHHHHHHHHHHHHHHHHHHHhc
Confidence 678899988887653 234569999999999998887777763
No 34
>1qvr_A CLPB protein; coiled coil, AAA ATPase, chaperone; HET: ANP; 3.00A {Thermus thermophilus} SCOP: a.174.1.1 c.37.1.20 c.37.1.20
Probab=99.82 E-value=2.6e-19 Score=231.46 Aligned_cols=261 Identities=22% Similarity=0.329 Sum_probs=177.8
Q ss_pred hhHHHHhhcCCCCCccc-ccccHHHHhhhhcccccChHHHHHHHHHHHHHhhh--cCCCCC-ceEEEeCCCCCCchHHHH
Q psy8969 324 RNYLDWLTSLPWGIQSE-ENLDLTQAAKILDDDHYGMEDVKKRILEFIAVSQL--KGTTQG-KILCFYGPPGVGKTSIAK 399 (1230)
Q Consensus 324 ~~yl~~~~~lpw~~~~~-~~~~~~~~~~~l~~d~~G~~~vK~~i~e~l~~~~~--~~~~~~-~~llL~GPPG~GKTslak 399 (1230)
...+.-.+.+|+..... +...+....+.|.++++|++.+++.|...+..... ....++ ..+||+||||||||++|+
T Consensus 527 ~~~v~~~~~ip~~~~~~~~~~~l~~l~~~l~~~viG~~~a~~~l~~~i~~~~~g~~~~~~p~~~vLl~Gp~GtGKT~lA~ 606 (854)
T 1qvr_A 527 AEIVSRWTGIPVSKLLEGEREKLLRLEEELHKRVVGQDEAIRAVADAIRRARAGLKDPNRPIGSFLFLGPTGVGKTELAK 606 (854)
T ss_dssp HHHHHTTSSCHHHHTTCCHHHHHHSHHHHHHHHSCSCHHHHHHHHHHHHHHGGGCSCSSSCSEEEEEBSCSSSSHHHHHH
T ss_pred HHHHHHHhCCChHhhcHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHhcccCCCCCCceEEEEECCCCCCHHHHHH
Confidence 33444445666654432 23334455667888999999999999998865432 222223 478999999999999999
Q ss_pred HHHHHh---CCCeEEEecCCcch---hHHHhhccccccccCc-hhHHHHHHhhcCCCCEEEEecccccCCCCCCChhhHH
Q psy8969 400 SIARAL---NREYFRFSVGGMSD---VAEIKGHRRTYVGAMP-GKVIQCMKKTKTENPLVLIDEVDKIGKGYSGDPASAL 472 (1230)
Q Consensus 400 ~iA~~l---~~~~~~~~~~~~~d---~~~i~g~~~~~~g~~~-g~i~~~~~~~~~~~pvillDEIDk~~~~~~~~~~~al 472 (1230)
+||..+ +.+|++++++...+ .+++.|....|+|... |.+..++.. ....||||||||++. .+..+.|
T Consensus 607 ~la~~~~~~~~~~i~i~~~~~~~~~~~s~l~g~~~~~~G~~~~g~l~~~~~~--~~~~vl~lDEi~~l~----~~~~~~L 680 (854)
T 1qvr_A 607 TLAATLFDTEEAMIRIDMTEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRR--RPYSVILFDEIEKAH----PDVFNIL 680 (854)
T ss_dssp HHHHHHHSSGGGEEEECTTTCCSSGGGGGC--------------CHHHHHHH--CSSEEEEESSGGGSC----HHHHHHH
T ss_pred HHHHHhcCCCCcEEEEechhccchhHHHHHcCCCCCCcCccccchHHHHHHh--CCCeEEEEecccccC----HHHHHHH
Confidence 999999 78999999876654 3444555556777665 555555544 234599999999973 3567899
Q ss_pred HhhcChhhhhhhhhhccCccccCCceEEEEecCC--------------------------CCCCCHhhhcccc-eeecCC
Q psy8969 473 LEMLDPEQNANFLDHYLDVPVDLSRVLFICTANV--------------------------IDTIPEPLRDRME-MIDVSG 525 (1230)
Q Consensus 473 l~~ld~~q~~~f~d~~~~~~~d~s~v~~I~TaN~--------------------------~~~I~~~L~~R~~-~i~~~~ 525 (1230)
+++||... +.| -.+..+|+.+++||+|||. ...+.++|++|++ ++.+.+
T Consensus 681 l~~l~~~~---~~~-~~g~~vd~~~~iiI~tsn~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~f~~~l~~Rl~~~i~~~p 756 (854)
T 1qvr_A 681 LQILDDGR---LTD-SHGRTVDFRNTVIILTSNLGSPLILEGLQKGWPYERIRDEVFKVLQQHFRPEFLNRLDEIVVFRP 756 (854)
T ss_dssp HHHHTTTE---ECC-SSSCCEECTTEEEEEECCTTHHHHHHHHHTTCCHHHHHHHHHHHHHTTSCHHHHHTCSBCCBCCC
T ss_pred HHHhccCc---eEC-CCCCEeccCCeEEEEecCcChHHHhhhcccccchHHHHHHHHHHHHhhCCHHHHHhcCeEEeCCC
Confidence 99998643 222 2466789999999999997 2357899999995 678888
Q ss_pred CCHHHHHHHHHHhhcchhHHhcCCCCCCcccCHHHHHHHHHH-hhhhhhHHHHHHHHHHHHHH-HHHHHhhc
Q psy8969 526 YVAEEKVAIAAQYLIPQAMKESGLSPEQITLEPSAIQVLIKN-YCRESGVRNLQKHIEKVTRK-VALTIVKK 595 (1230)
Q Consensus 526 ~~~~e~~~i~~~~l~~~~~~~~gl~~~~i~~~~~~~~~li~~-~~~e~gvR~l~~~i~~i~r~-~~~~~~~~ 595 (1230)
++.++...|+..++ .+.....+-....+.++++++..|++. |...+|+|.|++.|+..+.. .+..++.+
T Consensus 757 l~~edi~~i~~~~l-~~~~~~~~~~~~~~~~~~~a~~~L~~~~~~~~gn~R~L~~~i~~~~~~~~~~~i~~~ 827 (854)
T 1qvr_A 757 LTKEQIRQIVEIQL-SYLRARLAEKRISLELTEAAKDFLAERGYDPVFGARPLRRVIQRELETPLAQKILAG 827 (854)
T ss_dssp CCHHHHHHHHHHHH-HHHHHHHHTTTCEEEECHHHHHHHHHHHCBTTTBTSTHHHHHHHHTHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHH-HHHHHHHHhCCceEEECHHHHHHHHHcCCCCCCChHHHHHHHHHHHHHHHHHHHHhC
Confidence 88899888887765 333333322223578999999999864 44589999999999996654 45555543
No 35
>3vfd_A Spastin; ATPase, microtubule severing, hydrolase; 3.30A {Homo sapiens}
Probab=99.82 E-value=4.4e-20 Score=217.90 Aligned_cols=224 Identities=22% Similarity=0.310 Sum_probs=140.5
Q ss_pred HHHHHHHHHhccCCCCCCccchhhhHHHHhhcCCCCCcccccccHHHHhhhhcccccChHHHHHHHHHHHHHhhhcCC--
Q psy8969 301 EVLNEELAKLGFLESHSSEFNVTRNYLDWLTSLPWGIQSEENLDLTQAAKILDDDHYGMEDVKKRILEFIAVSQLKGT-- 378 (1230)
Q Consensus 301 ~~~~~e~~~l~~~~~~~~e~~v~~~yl~~~~~lpw~~~~~~~~~~~~~~~~l~~d~~G~~~vK~~i~e~l~~~~~~~~-- 378 (1230)
++-.+++..+..+.+.. +..+.+.+++|.....| +|++|++.+++.|.+++........
T Consensus 81 ~kk~kd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~------------------~~iiG~~~~~~~l~~~~~~~~~~~~~~ 141 (389)
T 3vfd_A 81 TRKKKDLKNFRNVDSNL-ANLIMNEIVDNGTAVKF------------------DDIAGQDLAKQALQEIVILPSLRPELF 141 (389)
T ss_dssp ----------------C-CTTGGGTTBCCSCCCCG------------------GGSCSCHHHHHHHHHHTHHHHHCTTTS
T ss_pred ccccccccccccccHHH-HHHHHhhhhccCCCCCh------------------HHhCCHHHHHHHHHHHHHHhccCHHHh
Confidence 33456666666666554 33355666655444444 6899999999999999876544221
Q ss_pred ----CCCceEEEeCCCCCCchHHHHHHHHHhCCCeEEEecCCcchhHHHhhccccccccCchhHHHHHHhhcCCCC-EEE
Q psy8969 379 ----TQGKILCFYGPPGVGKTSIAKSIARALNREYFRFSVGGMSDVAEIKGHRRTYVGAMPGKVIQCMKKTKTENP-LVL 453 (1230)
Q Consensus 379 ----~~~~~llL~GPPG~GKTslak~iA~~l~~~~~~~~~~~~~d~~~i~g~~~~~~g~~~g~i~~~~~~~~~~~p-vil 453 (1230)
..+..|||+||||||||++|++||..++.+|+.++.+.+.. .|+|.....+...|..+...+| |||
T Consensus 142 ~~~~~~~~~vLL~GppGtGKT~la~aia~~~~~~~~~v~~~~l~~---------~~~g~~~~~~~~~~~~a~~~~~~il~ 212 (389)
T 3vfd_A 142 TGLRAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTS---------KYVGEGEKLVRALFAVARELQPSIIF 212 (389)
T ss_dssp CGGGCCCSEEEEESSTTSCHHHHHHHHHHHTTCEEEEECSCCC----------------CHHHHHHHHHHHHHSSSEEEE
T ss_pred cccCCCCceEEEECCCCCCHHHHHHHHHHhhcCcEEEeeHHHhhc---------cccchHHHHHHHHHHHHHhcCCeEEE
Confidence 34578999999999999999999999999999999877665 5788888888888888877665 899
Q ss_pred EecccccCCCCCCChhhHHHhhcChhhhhhhhhhccCcc-ccCCceEEEEecCCCCCCCHhhhcccc-eeecCCCCHHHH
Q psy8969 454 IDEVDKIGKGYSGDPASALLEMLDPEQNANFLDHYLDVP-VDLSRVLFICTANVIDTIPEPLRDRME-MIDVSGYVAEEK 531 (1230)
Q Consensus 454 lDEIDk~~~~~~~~~~~all~~ld~~q~~~f~d~~~~~~-~d~s~v~~I~TaN~~~~I~~~L~~R~~-~i~~~~~~~~e~ 531 (1230)
|||||.+..............++ ..|+..+.+.. ....+|+||+|||.++.|+++|++||. +|.+..|+.++.
T Consensus 213 iDEid~l~~~~~~~~~~~~~~~~-----~~ll~~l~~~~~~~~~~v~vI~atn~~~~l~~~l~~R~~~~i~i~~p~~~~r 287 (389)
T 3vfd_A 213 IDQVDSLLCERREGEHDASRRLK-----TEFLIEFDGVQSAGDDRVLVMGATNRPQELDEAVLRRFIKRVYVSLPNEETR 287 (389)
T ss_dssp EETGGGGC--------CTHHHHH-----HHHHHHHHHHC-----CEEEEEEESCGGGCCHHHHTTCCEEEECCCCCHHHH
T ss_pred EECchhhcccCCCccchHHHHHH-----HHHHHHhhcccccCCCCEEEEEecCCchhcCHHHHcCcceEEEcCCcCHHHH
Confidence 99999996543322211111111 01111111111 113579999999999999999999997 688999999999
Q ss_pred HHHHHHhhcchhHHhcCCCCCCcccCHHHHHHHHHH
Q psy8969 532 VAIAAQYLIPQAMKESGLSPEQITLEPSAIQVLIKN 567 (1230)
Q Consensus 532 ~~i~~~~l~~~~~~~~gl~~~~i~~~~~~~~~li~~ 567 (1230)
..|+..++- . ..+.++++.+..|.+.
T Consensus 288 ~~il~~~~~-----~-----~~~~l~~~~~~~la~~ 313 (389)
T 3vfd_A 288 LLLLKNLLC-----K-----QGSPLTQKELAQLARM 313 (389)
T ss_dssp HHHHHHHHT-----T-----SCCCSCHHHHHHHHHH
T ss_pred HHHHHHHHH-----h-----cCCCCCHHHHHHHHHH
Confidence 998876552 2 2345677777777654
No 36
>3eie_A Vacuolar protein sorting-associated protein 4; AAA ATPase, ATP-binding cassette, ATP-binding, endosome, MEM nucleotide-binding; 2.70A {Saccharomyces cerevisiae} PDB: 3eih_A* 2rko_A 3mhv_C
Probab=99.82 E-value=6.2e-20 Score=211.15 Aligned_cols=204 Identities=19% Similarity=0.258 Sum_probs=143.6
Q ss_pred cccccChHHHHHHHHHHHHHhhhc------CCCCCceEEEeCCCCCCchHHHHHHHHHhCCCeEEEecCCcchhHHHhhc
Q psy8969 353 DDDHYGMEDVKKRILEFIAVSQLK------GTTQGKILCFYGPPGVGKTSIAKSIARALNREYFRFSVGGMSDVAEIKGH 426 (1230)
Q Consensus 353 ~~d~~G~~~vK~~i~e~l~~~~~~------~~~~~~~llL~GPPG~GKTslak~iA~~l~~~~~~~~~~~~~d~~~i~g~ 426 (1230)
.+|++|++++|+.|.+.+...... +...++++||+||||||||++|++||+.++.+|+.++.+.+..
T Consensus 17 ~~di~G~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~vLl~GppGtGKT~la~aia~~~~~~~~~v~~~~l~~------- 89 (322)
T 3eie_A 17 WEDVAGLEGAKEALKEAVILPVKFPHLFKGNRKPTSGILLYGPPGTGKSYLAKAVATEANSTFFSVSSSDLVS------- 89 (322)
T ss_dssp GGGSCSCHHHHHHHHHHTHHHHHCGGGCCTTCCCCCEEEEECSSSSCHHHHHHHHHHHHTCEEEEEEHHHHHT-------
T ss_pred HHHhcChHHHHHHHHHHHHHHHhCHHHHhcCCCCCCeEEEECCCCCcHHHHHHHHHHHHCCCEEEEchHHHhh-------
Confidence 478999999999999988553321 2344678999999999999999999999999999998643322
Q ss_pred cccccccCchhHHHHHHhhcCCCC-EEEEecccccCCCCCCChhhHHHhhcChhhhhhhhhhccCccccCCceEEEEecC
Q psy8969 427 RRTYVGAMPGKVIQCMKKTKTENP-LVLIDEVDKIGKGYSGDPASALLEMLDPEQNANFLDHYLDVPVDLSRVLFICTAN 505 (1230)
Q Consensus 427 ~~~~~g~~~g~i~~~~~~~~~~~p-villDEIDk~~~~~~~~~~~all~~ld~~q~~~f~d~~~~~~~d~s~v~~I~TaN 505 (1230)
.|+|.....+...|..+....| ||||||||.+...+......++.. ....++..+.+...+..+|+||+|||
T Consensus 90 --~~~g~~~~~~~~~f~~a~~~~~~vl~iDEid~l~~~~~~~~~~~~~~-----~~~~ll~~l~~~~~~~~~v~vi~atn 162 (322)
T 3eie_A 90 --KWMGESEKLVKQLFAMARENKPSIIFIDQVDALTGTRGEGESEASRR-----IKTELLVQMNGVGNDSQGVLVLGATN 162 (322)
T ss_dssp --TTGGGHHHHHHHHHHHHHHTSSEEEEEECGGGGSCC------CCTHH-----HHHHHHHHHGGGGTSCCCEEEEEEES
T ss_pred --cccchHHHHHHHHHHHHHhcCCeEEEechhhhhhccCCCCcchHHHH-----HHHHHHHHhccccccCCceEEEEecC
Confidence 5888888889999988887776 889999999976432211111000 11122222222323456899999999
Q ss_pred CCCCCCHhhhcccc-eeecCCCCHHHHHHHHHHhhcchhHHhcCCCCCCcccCHHHHHHHHHHhhhhhhHHHHHHHH
Q psy8969 506 VIDTIPEPLRDRME-MIDVSGYVAEEKVAIAAQYLIPQAMKESGLSPEQITLEPSAIQVLIKNYCRESGVRNLQKHI 581 (1230)
Q Consensus 506 ~~~~I~~~L~~R~~-~i~~~~~~~~e~~~i~~~~l~~~~~~~~gl~~~~i~~~~~~~~~li~~~~~e~gvR~l~~~i 581 (1230)
.++.|+++|++||+ .|.+..|+.++...|++.++- . ....+++..+..|.+. +.+...+.|+..+
T Consensus 163 ~~~~ld~al~~Rf~~~i~~~~p~~~~r~~il~~~~~-----~-----~~~~~~~~~l~~la~~-t~g~sg~di~~l~ 228 (322)
T 3eie_A 163 IPWQLDSAIRRRFERRIYIPLPDLAARTTMFEINVG-----D-----TPCVLTKEDYRTLGAM-TEGYSGSDIAVVV 228 (322)
T ss_dssp CGGGSCHHHHHHCCEEEECCCCCHHHHHHHHHHHHT-----T-----CCCCCCHHHHHHHHHT-TTTCCHHHHHHHH
T ss_pred ChhhCCHHHHcccCeEEEeCCCCHHHHHHHHHHHhc-----c-----CCCCCCHHHHHHHHHH-cCCCCHHHHHHHH
Confidence 99999999999996 578888999999998877652 1 2334567777777643 4333344444333
No 37
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Probab=99.82 E-value=7.8e-21 Score=186.64 Aligned_cols=119 Identities=33% Similarity=0.735 Sum_probs=106.6
Q ss_pred CCCCCCCCCCCCCCCccChhHHHhhhhcccCCCceecCCCccCccccChhhHHHHHhhccCCCCccccccccccccCCch
Q psy8969 788 SERPFPCPVLGCDRSFTTSNIRKVHIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYS 867 (1230)
Q Consensus 788 ~ekp~~C~~~~C~k~F~~~~~L~~H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~~~~C~k~F~~~~ 867 (1230)
.+++|.|++..|++.|.+...|..|+++| ++++|.|.. |++.|.+...|..|+++|++++||.|.++.|++.|.+..
T Consensus 2 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~ 78 (124)
T 1ubd_C 2 EPRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAE--CGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDF 78 (124)
T ss_dssp ---CEECCSTTCCCEESSHHHHHHHHGGG-SCCCEECTT--TCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHH
T ss_pred CCCcccCCCCCCcCccCCHHHHHHHHHHc-CCCCeECCC--CCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHH
Confidence 35789998445999999999999999999 899999999 999999999999999999999999997556999999999
Q ss_pred hHhhhhccccCCCCccCC--CCCcccCChhhHHhHHhhhcCCCC
Q psy8969 868 SLYKHTLVHSDIRPFICD--RCPRSYRQLCTLNVHKKTNHRESK 909 (1230)
Q Consensus 868 ~L~~H~~~H~~ekpy~C~--~Cgk~F~~~~~L~~H~k~hh~~~~ 909 (1230)
.|..|+++|++++||.|. .|++.|.+.+.|..|+++|+++++
T Consensus 79 ~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k~ 122 (124)
T 1ubd_C 79 NLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKN 122 (124)
T ss_dssp HHHHHHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC----
T ss_pred HHHHHHHHhCCCCceECCCCCCCCccCCHHHHHHHHHHHccccc
Confidence 999999999999999995 599999999999999999998754
No 38
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=99.82 E-value=2e-21 Score=194.85 Aligned_cols=93 Identities=29% Similarity=0.550 Sum_probs=87.7
Q ss_pred cccCCCCCccCCCCCCCCCCchhhhccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeecccccCccccc
Q psy8969 1129 KKSTSSENNVCPECKKTFSSAHHMKVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKT 1208 (1230)
Q Consensus 1129 ~~~t~~kpy~C~~CgK~F~s~s~Lk~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~~e~CGKsF~~ 1208 (1230)
..+.|+++|.|++||+.|.+.++|.+|+++|+|++||+|+ .|+++|.+++.|.+|+++|+|++||.| ++||++|.+
T Consensus 15 ~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~~~C--~~C~k~F~~ 90 (133)
T 2lt7_A 15 LIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCR--YCEKVFPLAEYRTKHEIHHTGERRYQC--LACGKSFIN 90 (133)
T ss_dssp EEETTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECS--SSSCEESSHHHHHHHHHHHHTCCCEEE--SSSCCEESS
T ss_pred eecCCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCC--ccCeecccccchhhhccccCCCccccC--CCCCCCcCC
Confidence 4568999999999999999999999999999999999995 699999999999999999999999999 479999999
Q ss_pred hhhHHHHhhhccCcccc
Q psy8969 1209 SGDLQKHVRTHTDEFQM 1225 (1230)
Q Consensus 1209 ks~LkrH~R~HtGE~~~ 1225 (1230)
+.+|.+|+++||++...
T Consensus 91 ~~~L~~H~~~hh~~~p~ 107 (133)
T 2lt7_A 91 YQFMSSHIKSVHSQDPS 107 (133)
T ss_dssp HHHHHHHHHHHTCCCTT
T ss_pred HHHHHHHhHHhcCCCCC
Confidence 99999999999988654
No 39
>2zan_A Vacuolar protein sorting-associating protein 4B; SKD1, VPS4B, AAA ATPase, ATP-binding, coiled coil, membrane, nucleotide-binding, phosphorylation; HET: ATP; 3.00A {Mus musculus} PDB: 2zam_A* 2zao_A* 2jqh_A 2jqk_A 1wr0_A 2jq9_A 2k3w_A 1yxr_A
Probab=99.81 E-value=2.9e-19 Score=214.36 Aligned_cols=214 Identities=21% Similarity=0.291 Sum_probs=145.6
Q ss_pred cccccChHHHHHHHHHHHHHhhhc------CCCCCceEEEeCCCCCCchHHHHHHHHHh-CCCeEEEecCCcchhHHHhh
Q psy8969 353 DDDHYGMEDVKKRILEFIAVSQLK------GTTQGKILCFYGPPGVGKTSIAKSIARAL-NREYFRFSVGGMSDVAEIKG 425 (1230)
Q Consensus 353 ~~d~~G~~~vK~~i~e~l~~~~~~------~~~~~~~llL~GPPG~GKTslak~iA~~l-~~~~~~~~~~~~~d~~~i~g 425 (1230)
.+|++|++++|+.|.+.+...... +...++++||+||||||||+||++||+.+ +.+|+.++...+.+
T Consensus 133 ~~di~G~~~~k~~l~~~v~~p~~~~~~~~~~~~~~~~vLL~GppGtGKT~lA~aia~~~~~~~~~~v~~~~l~~------ 206 (444)
T 2zan_A 133 WSDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILLFGPPGTGKSYLAKAVATEANNSTFFSISSSDLVS------ 206 (444)
T ss_dssp GGGSCSCHHHHHHHHHHHTHHHHCTTTTSGGGCCCSEEEEECSTTSSHHHHHHHHHHHCCSSEEEEECCC----------
T ss_pred HHHhcCHHHHHHHHHHHHHHHhhCHHHhhccCCCCceEEEECCCCCCHHHHHHHHHHHcCCCCEEEEeHHHHHh------
Confidence 378999999999999988543221 12456789999999999999999999999 89999998766544
Q ss_pred ccccccccCchhHHHHHHhhcCCCC-EEEEecccccCCCCCCChhhHHHhhcChhhhhhhhhhccCccccCCceEEEEec
Q psy8969 426 HRRTYVGAMPGKVIQCMKKTKTENP-LVLIDEVDKIGKGYSGDPASALLEMLDPEQNANFLDHYLDVPVDLSRVLFICTA 504 (1230)
Q Consensus 426 ~~~~~~g~~~g~i~~~~~~~~~~~p-villDEIDk~~~~~~~~~~~all~~ld~~q~~~f~d~~~~~~~d~s~v~~I~Ta 504 (1230)
.|+|.....+...|..+....| ||||||||.+...+......+...+ ...|+..+.++..+..+|+||+||
T Consensus 207 ---~~~g~~~~~~~~~f~~a~~~~~~vl~iDEid~l~~~~~~~~~~~~~~~-----~~~lL~~l~~~~~~~~~v~vI~at 278 (444)
T 2zan_A 207 ---KWLGESEKLVKNLFQLARENKPSIIFIDEIDSLCGSRSENESEAARRI-----KTEFLVQMQGVGVDNDGILVLGAT 278 (444)
T ss_dssp --------CCCTHHHHHHHHHHSCSEEEEESCTTTTCCCSSCCCCGGGHHH-----HHHHHTTTTCSSCCCSSCEEEEEE
T ss_pred ---hhcchHHHHHHHHHHHHHHcCCeEEEEechHhhccCCCCccccHHHHH-----HHHHHHHHhCcccCCCCEEEEecC
Confidence 5888888888888988776555 8999999999754332211111111 112333333333456789999999
Q ss_pred CCCCCCCHhhhcccc-eeecCCCCHHHHHHHHHHhhcchhHHhcCCCCCCcccCHHHHHHHHHHhhhhhhHHHHHHHHHH
Q psy8969 505 NVIDTIPEPLRDRME-MIDVSGYVAEEKVAIAAQYLIPQAMKESGLSPEQITLEPSAIQVLIKNYCRESGVRNLQKHIEK 583 (1230)
Q Consensus 505 N~~~~I~~~L~~R~~-~i~~~~~~~~e~~~i~~~~l~~~~~~~~gl~~~~i~~~~~~~~~li~~~~~e~gvR~l~~~i~~ 583 (1230)
|.++.|+++|++||+ +|.++.++.++...|++.++- . ..+.+++..+..|++. |.+...+.|+..+..
T Consensus 279 n~~~~ld~al~rRf~~~i~i~~P~~~~r~~il~~~l~-----~-----~~~~l~~~~l~~la~~-t~G~sgadl~~l~~~ 347 (444)
T 2zan_A 279 NIPWVLDSAIRRRFEKRIYIPLPEAHARAAMFRLHLG-----S-----TQNSLTEADFQELGRK-TDGYSGADISIIVRD 347 (444)
T ss_dssp SCGGGSCHHHHTTCCEEEECCCCCHHHHHHHHHHHHT-----T-----SCEECCHHHHHHHHHH-TTTCCHHHHHHHHHH
T ss_pred CCccccCHHHHhhcceEEEeCCcCHHHHHHHHHHHHh-----c-----CCCCCCHHHHHHHHHH-cCCCCHHHHHHHHHH
Confidence 999999999999997 678888888888888877652 1 2334677777777654 444445555555444
Q ss_pred HHHHHHHH
Q psy8969 584 VTRKVALT 591 (1230)
Q Consensus 584 i~r~~~~~ 591 (1230)
.+....+.
T Consensus 348 a~~~a~r~ 355 (444)
T 2zan_A 348 ALMQPVRK 355 (444)
T ss_dssp HHTHHHHH
T ss_pred HHHHHHHH
Confidence 44333333
No 40
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=99.81 E-value=3.8e-20 Score=181.18 Aligned_cols=115 Identities=30% Similarity=0.624 Sum_probs=108.9
Q ss_pred CCCCCCCCCCCCCCCCccChhHHHhhhhcccCCCceecCCCccCccccChhhHHHHHhh---ccCCCCcccccccccccc
Q psy8969 787 TSERPFPCPVLGCDRSFTTSNIRKVHIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRI---HSGEKPYVCQVRDCQKRF 863 (1230)
Q Consensus 787 t~ekp~~C~~~~C~k~F~~~~~L~~H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~---Htgekpy~C~~~~C~k~F 863 (1230)
+++++|.|+. |++.|.....|..|+++|+++++|.|.. |++.|.+...|..|++. |.++++|.|.+ |++.|
T Consensus 3 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~--C~~~f 76 (124)
T 2dlq_A 3 SGSSGVECPT--CHKKFLSKYYLKVHNRKHTGEKPFECPK--CGKCYFRKENLLEHEARNCMNRSEQVFTCSV--CQETF 76 (124)
T ss_dssp CCCSSCCCTT--TCCCCSSHHHHHHHHHHHSSCCSCBCTT--TCCBCSSHHHHHHHHHHCCCCSCCCCEECSS--SCCEE
T ss_pred CCCCCCCCCC--CCCcCCCHHHHHHHHHhCCCCCCeECCC--CCchhcCHHHHHHHHhhhhcCCCCCCeECCC--CCCcc
Confidence 5788999998 9999999999999999999999999999 99999999999999995 67899999986 99999
Q ss_pred CCchhHhhhhccccCCCCccCCCCCcccCChhhHHhHHhhhcCC
Q psy8969 864 TEYSSLYKHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRE 907 (1230)
Q Consensus 864 ~~~~~L~~H~~~H~~ekpy~C~~Cgk~F~~~~~L~~H~k~hh~~ 907 (1230)
.+...|..|+++|++++||.|+.|++.|.+...|..|++.+|+.
T Consensus 77 ~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~ 120 (124)
T 2dlq_A 77 RRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSG 120 (124)
T ss_dssp SSHHHHHHHHHHHSSSCSEECSSSCCEESSHHHHHHHHHHTSSC
T ss_pred CCHHHHHHHHHHcCCCCCccCCCccchhCCHHHHHHHHHHHCCC
Confidence 99999999999999999999999999999999999999876543
No 41
>2qp9_X Vacuolar protein sorting-associated protein 4; ATPase domain, beta domain, C-terminal helix, ATP-binding, E nucleotide-binding; 2.90A {Saccharomyces cerevisiae} PDB: 2qpa_A*
Probab=99.81 E-value=2.5e-19 Score=208.94 Aligned_cols=210 Identities=19% Similarity=0.259 Sum_probs=140.5
Q ss_pred cccccChHHHHHHHHHHHHHhhhc------CCCCCceEEEeCCCCCCchHHHHHHHHHhCCCeEEEecCCcchhHHHhhc
Q psy8969 353 DDDHYGMEDVKKRILEFIAVSQLK------GTTQGKILCFYGPPGVGKTSIAKSIARALNREYFRFSVGGMSDVAEIKGH 426 (1230)
Q Consensus 353 ~~d~~G~~~vK~~i~e~l~~~~~~------~~~~~~~llL~GPPG~GKTslak~iA~~l~~~~~~~~~~~~~d~~~i~g~ 426 (1230)
.+|++|++++|+.|.+.+...... +...+.+|||+||||||||+||++||+.++.+|+.++...+.+
T Consensus 50 ~~di~G~~~~~~~l~~~v~~~~~~~~~~~~~~~~~~~iLL~GppGtGKT~la~ala~~~~~~~~~v~~~~l~~------- 122 (355)
T 2qp9_X 50 WEDVAGLEGAKEALKEAVILPVKFPHLFKGNRKPTSGILLYGPPGTGKSYLAKAVATEANSTFFSVSSSDLVS------- 122 (355)
T ss_dssp GGGSCCGGGHHHHHHHHTHHHHHCGGGGCSSCCCCCCEEEECSTTSCHHHHHHHHHHHHTCEEEEEEHHHHHS-------
T ss_pred HHHhCCHHHHHHHHHHHHHHHHhCHHHHhcCCCCCceEEEECCCCCcHHHHHHHHHHHhCCCEEEeeHHHHhh-------
Confidence 368999999999999988553211 2345578999999999999999999999999999987643322
Q ss_pred cccccccCchhHHHHHHhhcCCCC-EEEEecccccCCCCCCChhhHHHhhcChhhhhhhhhhccCccccCCceEEEEecC
Q psy8969 427 RRTYVGAMPGKVIQCMKKTKTENP-LVLIDEVDKIGKGYSGDPASALLEMLDPEQNANFLDHYLDVPVDLSRVLFICTAN 505 (1230)
Q Consensus 427 ~~~~~g~~~g~i~~~~~~~~~~~p-villDEIDk~~~~~~~~~~~all~~ld~~q~~~f~d~~~~~~~d~s~v~~I~TaN 505 (1230)
.|+|.....+...|..+....| ||||||||.+...+..........+ ...|+..+.++..+..+|+||+|||
T Consensus 123 --~~~g~~~~~~~~~f~~a~~~~~~vl~iDEid~l~~~r~~~~~~~~~~~-----~~~ll~~l~~~~~~~~~v~vI~atn 195 (355)
T 2qp9_X 123 --KWMGESEKLVKQLFAMARENKPSIIFIDQVDALTGTRGEGESEASRRI-----KTELLVQMNGVGNDSQGVLVLGATN 195 (355)
T ss_dssp --CC---CHHHHHHHHHHHHHTSSEEEEEECGGGGTC------CTHHHHH-----HHHHHHHHHHCC---CCEEEEEEES
T ss_pred --hhcchHHHHHHHHHHHHHHcCCeEEEEechHhhcccCCCCcchHHHHH-----HHHHHHHhhcccccCCCeEEEeecC
Confidence 5788888888888888776555 8899999999754322111111111 0112222112222346899999999
Q ss_pred CCCCCCHhhhcccc-eeecCCCCHHHHHHHHHHhhcchhHHhcCCCCCCcccCHHHHHHHHHHhhhhhhHHHHHHHHHHH
Q psy8969 506 VIDTIPEPLRDRME-MIDVSGYVAEEKVAIAAQYLIPQAMKESGLSPEQITLEPSAIQVLIKNYCRESGVRNLQKHIEKV 584 (1230)
Q Consensus 506 ~~~~I~~~L~~R~~-~i~~~~~~~~e~~~i~~~~l~~~~~~~~gl~~~~i~~~~~~~~~li~~~~~e~gvR~l~~~i~~i 584 (1230)
.++.|+++|++||+ .+.+..++.++...|++.++- .. ...+++..+..|++. |.+...|.|+..+...
T Consensus 196 ~~~~ld~al~rRf~~~i~i~~P~~~~r~~il~~~l~-----~~-----~~~~~~~~l~~la~~-t~G~sg~dl~~l~~~A 264 (355)
T 2qp9_X 196 IPWQLDSAIRRRFERRIYIPLPDLAARTTMFEINVG-----DT-----PSVLTKEDYRTLGAM-TEGYSGSDIAVVVKDA 264 (355)
T ss_dssp CGGGSCHHHHHTCCEEEECCCCCHHHHHHHHHHHHT-----TS-----CBCCCHHHHHHHHHH-TTTCCHHHHHHHHHHH
T ss_pred CcccCCHHHHcccCEEEEeCCcCHHHHHHHHHHHHh-----hC-----CCCCCHHHHHHHHHH-cCCCCHHHHHHHHHHH
Confidence 99999999999995 678888999999888877652 11 234567777777654 4443445555555444
Q ss_pred HHH
Q psy8969 585 TRK 587 (1230)
Q Consensus 585 ~r~ 587 (1230)
+..
T Consensus 265 ~~~ 267 (355)
T 2qp9_X 265 LMQ 267 (355)
T ss_dssp HHH
T ss_pred HHH
Confidence 433
No 42
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Probab=99.80 E-value=1.4e-20 Score=184.74 Aligned_cols=89 Identities=37% Similarity=0.821 Sum_probs=71.5
Q ss_pred CccCCCCCCCCCCchhhhccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeecccccCccccchhhHHHH
Q psy8969 1136 NNVCPECKKTFSSAHHMKVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKH 1215 (1230)
Q Consensus 1136 py~C~~CgK~F~s~s~Lk~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~~e~CGKsF~~ks~LkrH 1215 (1230)
+|.|+.|++.|.+.+.|..|+++|++++||.|+++.|++.|.+...|.+|+++|++++||.|+.+.||+.|.++.+|.+|
T Consensus 34 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H 113 (124)
T 1ubd_C 34 VHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSH 113 (124)
T ss_dssp CEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHHHHHHHHHCCCCCCCCSTTCCCCCSSTTTTHHH
T ss_pred CeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCCCCceECCCCCCCCccCCHHHHHHH
Confidence 46788888888888888888888888888888644588888888888889888888888888422488999888889999
Q ss_pred hhhccCccc
Q psy8969 1216 VRTHTDEFQ 1224 (1230)
Q Consensus 1216 ~R~HtGE~~ 1224 (1230)
+++|++++.
T Consensus 114 ~~~H~~~k~ 122 (124)
T 1ubd_C 114 ILTHAKAKN 122 (124)
T ss_dssp HHHHC----
T ss_pred HHHHccccc
Confidence 888888764
No 43
>1ypw_A Transitional endoplasmic reticulum ATPase; AAA, P97/VCP, ERAD, CDC48; HET: ADP ANP; 3.50A {Mus musculus} PDB: 1oz4_A* 1yq0_A* 1yqi_A* 1r7r_A* 3cf2_A* 3cf1_A* 3cf3_A*
Probab=99.80 E-value=9.4e-22 Score=251.62 Aligned_cols=231 Identities=23% Similarity=0.354 Sum_probs=163.9
Q ss_pred HHhhcCCCCCcccccccHHHHhhhhcccccChHHHHHHHHHHHHHhhhc-------CCCCCceEEEeCCCCCCchHHHHH
Q psy8969 328 DWLTSLPWGIQSEENLDLTQAAKILDDDHYGMEDVKKRILEFIAVSQLK-------GTTQGKILCFYGPPGVGKTSIAKS 400 (1230)
Q Consensus 328 ~~~~~lpw~~~~~~~~~~~~~~~~l~~d~~G~~~vK~~i~e~l~~~~~~-------~~~~~~~llL~GPPG~GKTslak~ 400 (1230)
||...++|...+.....+.....+..+|++|++++|+.|.+++.+.... +..++.++||+||||||||+||++
T Consensus 451 d~~~al~~~~~s~~~~~~~~~~~v~~~di~gl~~vk~~l~~~v~~~~~~~~~~~~~~~~~~~~vLL~GppGtGKT~Laka 530 (806)
T 1ypw_A 451 DFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKA 530 (806)
T ss_dssp HHHHHHHHSCCCCCCCCCCCCCCCSSCSSSCCCCHHHHHHTTTTSSSSSCTTTTCCCCCCCCCCCCBCCTTSSHHHHHHH
T ss_pred hhhccccccCchhhhhhcccCccccccccccchhhhhhHHHHHHhhhhchHHHHhcCCCCCceeEEECCCCCCHHHHHHH
Confidence 4455556655544444455556778899999999999999988643222 345678899999999999999999
Q ss_pred HHHHhCCCeEEEecCCcchhHHHhhccccccccCchhHHHHHHhhcCCCC-EEEEecccccCCCCCCC---hh-------
Q psy8969 401 IARALNREYFRFSVGGMSDVAEIKGHRRTYVGAMPGKVIQCMKKTKTENP-LVLIDEVDKIGKGYSGD---PA------- 469 (1230)
Q Consensus 401 iA~~l~~~~~~~~~~~~~d~~~i~g~~~~~~g~~~g~i~~~~~~~~~~~p-villDEIDk~~~~~~~~---~~------- 469 (1230)
||..++.+|++++.+++.+ .|+|+.++.+.+.|..+...+| ||||||||++...+.++ ..
T Consensus 531 la~~~~~~~i~v~~~~l~~---------~~~g~~~~~i~~~f~~a~~~~p~vl~iDEid~l~~~r~~~~~~~~~~~~~v~ 601 (806)
T 1ypw_A 531 IANECQANFISIKGPELLT---------MWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVI 601 (806)
T ss_dssp HHHHHTCCCCCCCCSSSTT---------CCTTTSSHHHHHHHHHHHHHCSBCCCCSSHHHHCCTTTTCCSHHHHHHHHHH
T ss_pred HHHHhCCCEEEEechHhhh---------hhcCccHHHHHHHHHHHHhcCCeEEEEEChhhhhhhccCCCCCcchhHHHHH
Confidence 9999999999999877765 6999999999999999888776 89999999998765443 11
Q ss_pred hHHHhhcChhhhhhhhhhccCccccCCceEEEEecCCCCCCCHhhhc--ccc-eeecCCCCHHHHHHHHHHhhcchhHHh
Q psy8969 470 SALLEMLDPEQNANFLDHYLDVPVDLSRVLFICTANVIDTIPEPLRD--RME-MIDVSGYVAEEKVAIAAQYLIPQAMKE 546 (1230)
Q Consensus 470 ~all~~ld~~q~~~f~d~~~~~~~d~s~v~~I~TaN~~~~I~~~L~~--R~~-~i~~~~~~~~e~~~i~~~~l~~~~~~~ 546 (1230)
+.||..||.. .+.++|+||+|||+++.||++|++ ||+ +|.++.|+.+++..|++.++-...+ .
T Consensus 602 ~~LL~~ld~~-------------~~~~~v~vI~tTN~~~~ld~allrpgRf~~~i~~~~p~~~~r~~Il~~~l~~~~~-~ 667 (806)
T 1ypw_A 602 NQILTEMDGM-------------STKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPV-A 667 (806)
T ss_dssp HHHHTTCC-------------------CCBCCCCCBSCGGGSCTTSSGGGTTSCCCCCCCCCSHHHHHTTTTTSCC----
T ss_pred HHHHHHHhcc-------------cccCCeEEEEecCCcccCCHHHhCccccCceeecCCCCHHHHHHHHHHHhccCCC-C
Confidence 3344444431 234689999999999999999999 998 6888889999999999887733222 2
Q ss_pred cCCCCCCc-----ccCHHHHHHHHHHhhhhhhHHHHHHHH
Q psy8969 547 SGLSPEQI-----TLEPSAIQVLIKNYCRESGVRNLQKHI 581 (1230)
Q Consensus 547 ~gl~~~~i-----~~~~~~~~~li~~~~~e~gvR~l~~~i 581 (1230)
.+++.+.+ -++...+..+++.++..+..|.+++.+
T Consensus 668 ~~~~l~~la~~t~g~sgadi~~l~~~a~~~a~~~~~~~~~ 707 (806)
T 1ypw_A 668 KDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEI 707 (806)
T ss_dssp -CCCCSCSCGGGSSSCCHHHHHHHHHHHHHHHSCC-----
T ss_pred cccCHHHHHHhccccCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 23333333 245556666665555555544444433
No 44
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=99.80 E-value=1.4e-20 Score=188.77 Aligned_cols=105 Identities=26% Similarity=0.450 Sum_probs=96.3
Q ss_pred cccCCCCCCCCCCCCCCCCccChhHHHhhhhcccCCCceecCCCccCccccChhhHHHHHhhccCCCCcccccccccccc
Q psy8969 784 FEHTSERPFPCPVLGCDRSFTTSNIRKVHIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQVRDCQKRF 863 (1230)
Q Consensus 784 ~~ht~ekp~~C~~~~C~k~F~~~~~L~~H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~~~~C~k~F 863 (1230)
..|.|+++|.|++ |++.|.....|..|+++|++++||+|+. ||+.|.+.+.|..|+++|+|++||.|+. |++.|
T Consensus 15 ~~h~Gek~y~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~--C~k~F 88 (133)
T 2lt7_A 15 LIVDGRVYYICIV--CKRSYVCLTSLRRHFNIHSWEKKYPCRY--CEKVFPLAEYRTKHEIHHTGERRYQCLA--CGKSF 88 (133)
T ss_dssp EEETTEEEEEETT--TCCEESCHHHHHHHHHHHHCCSCEECSS--SSCEESSHHHHHHHHHHHHTCCCEEESS--SCCEE
T ss_pred eecCCCcCeECCC--CCCCcCCHHHHHHHHHHcCCCCCeeCCc--cCeecccccchhhhccccCCCccccCCC--CCCCc
Confidence 4578999999998 9999999999999999999999999999 9999999999999999999999999986 99999
Q ss_pred CCchhHhhhhccccCCC------CccCCCCCcccCCh
Q psy8969 864 TEYSSLYKHTLVHSDIR------PFICDRCPRSYRQL 894 (1230)
Q Consensus 864 ~~~~~L~~H~~~H~~ek------py~C~~Cgk~F~~~ 894 (1230)
.+...|..|+++|++++ +|+|..|++.|...
T Consensus 89 ~~~~~L~~H~~~hh~~~p~~~~k~~~C~~C~k~~~~~ 125 (133)
T 2lt7_A 89 INYQFMSSHIKSVHSQDPSGDSKLYRLHPCRSLQIRQ 125 (133)
T ss_dssp SSHHHHHHHHHHHTCCCTTSSSCCEEECCCCSSCCCC
T ss_pred CCHHHHHHHhHHhcCCCCCCCCCCeecCCCCchhhhc
Confidence 99999999999998764 58899999988753
No 45
>3cf0_A Transitional endoplasmic reticulum ATPase; AAA, P97/VCP, ERAD, CDC48, ATP-binding, lipid-binding, nucle binding, nucleus, phosphoprotein, transport; HET: ADP; 3.00A {Mus musculus}
Probab=99.79 E-value=1e-19 Score=207.29 Aligned_cols=166 Identities=28% Similarity=0.434 Sum_probs=128.3
Q ss_pred hcccccChHHHHHHHHHHHHHhh-------hcCCCCCceEEEeCCCCCCchHHHHHHHHHhCCCeEEEecCCcchhHHHh
Q psy8969 352 LDDDHYGMEDVKKRILEFIAVSQ-------LKGTTQGKILCFYGPPGVGKTSIAKSIARALNREYFRFSVGGMSDVAEIK 424 (1230)
Q Consensus 352 l~~d~~G~~~vK~~i~e~l~~~~-------~~~~~~~~~llL~GPPG~GKTslak~iA~~l~~~~~~~~~~~~~d~~~i~ 424 (1230)
-.+|++|++++|+.|.+++.... ..+...+.++||+||||||||++|++||..++.+|+.++...+.+
T Consensus 13 ~~~di~G~~~~~~~l~~~v~~~~~~~~~~~~~~~~~~~~vLL~Gp~GtGKT~la~ala~~~~~~~i~v~~~~l~~----- 87 (301)
T 3cf0_A 13 TWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLT----- 87 (301)
T ss_dssp CGGGSCSCHHHHHHHHHHHHHHHHCHHHHHHHCCCCCSEEEEECSSSSSHHHHHHHHHHHTTCEEEEECHHHHHH-----
T ss_pred CHHHhCCHHHHHHHHHHHHHHHhhCHHHHHHcCCCCCceEEEECCCCcCHHHHHHHHHHHhCCCEEEEEhHHHHh-----
Confidence 34789999999999999986532 124567789999999999999999999999999999987543322
Q ss_pred hccccccccCchhHHHHHHhhcCCCC-EEEEecccccCCCCCC---C-------hhhHHHhhcChhhhhhhhhhccCccc
Q psy8969 425 GHRRTYVGAMPGKVIQCMKKTKTENP-LVLIDEVDKIGKGYSG---D-------PASALLEMLDPEQNANFLDHYLDVPV 493 (1230)
Q Consensus 425 g~~~~~~g~~~g~i~~~~~~~~~~~p-villDEIDk~~~~~~~---~-------~~~all~~ld~~q~~~f~d~~~~~~~ 493 (1230)
.|+|.....+...|..+....| ||||||||.+...+.+ + ..+.||..||. + .
T Consensus 88 ----~~~g~~~~~~~~~f~~a~~~~p~il~iDEid~l~~~~~~~~~~~~~~~~~~~~~lL~~l~~------------~-~ 150 (301)
T 3cf0_A 88 ----MWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDG------------M-S 150 (301)
T ss_dssp ----HHHTTCTTHHHHHHHHHHHTCSEEEEECSTTHHHHHHTTTTCCSSCSCCHHHHHHHHHHHS------------S-C
T ss_pred ----hhcCchHHHHHHHHHHHHhcCCeEEEEEChHHHhhccCCCcCCcchHHHHHHHHHHHHhhc------------c-c
Confidence 5788888888888888876555 8889999998632211 0 12344444431 1 1
Q ss_pred cCCceEEEEecCCCCCCCHhhhc--ccc-eeecCCCCHHHHHHHHHHhh
Q psy8969 494 DLSRVLFICTANVIDTIPEPLRD--RME-MIDVSGYVAEEKVAIAAQYL 539 (1230)
Q Consensus 494 d~s~v~~I~TaN~~~~I~~~L~~--R~~-~i~~~~~~~~e~~~i~~~~l 539 (1230)
+..+|+||+|||.++.|++++++ ||+ +|.++.++.++...|++.++
T Consensus 151 ~~~~v~vi~atn~~~~ld~al~r~gRf~~~i~i~~p~~~~r~~il~~~l 199 (301)
T 3cf0_A 151 TKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANL 199 (301)
T ss_dssp TTSSEEEEEEESCGGGSCGGGGSTTSSCEEEECCCCCHHHHHHHHHHHH
T ss_pred CCCCEEEEEecCCccccChHHhcCCccceEEecCCcCHHHHHHHHHHHH
Confidence 23689999999999999999998 996 68899999999998887665
No 46
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Probab=99.79 E-value=6.6e-20 Score=187.34 Aligned_cols=92 Identities=37% Similarity=0.730 Sum_probs=84.1
Q ss_pred CccCCCCCCCCCCchhhhccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeecccccCccccchhhHHHH
Q psy8969 1136 NNVCPECKKTFSSAHHMKVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKH 1215 (1230)
Q Consensus 1136 py~C~~CgK~F~s~s~Lk~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~~e~CGKsF~~ks~LkrH 1215 (1230)
.|.|+.|++.|.+.+.|..|+++|++++||+|++..|++.|.+...|.+|+++|++++||.|..+.|++.|.++.+|.+|
T Consensus 62 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H 141 (155)
T 2rpc_A 62 WEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKH 141 (155)
T ss_dssp BTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHS
T ss_pred ccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHH
Confidence 36799999999999999999999999999999533499999999999999999999999999421399999999999999
Q ss_pred hhhccCcccccc
Q psy8969 1216 VRTHTDEFQMSG 1227 (1230)
Q Consensus 1216 ~R~HtGE~~~s~ 1227 (1230)
+++|+||+.+.+
T Consensus 142 ~~~H~~~k~~~c 153 (155)
T 2rpc_A 142 MHVHTSDKSGPS 153 (155)
T ss_dssp STTTTSCCCSCS
T ss_pred HHHhcCCCCCCC
Confidence 999999998865
No 47
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Probab=99.79 E-value=1.2e-19 Score=185.32 Aligned_cols=124 Identities=27% Similarity=0.530 Sum_probs=114.2
Q ss_pred ccCCCCCCCCCCCCCCCCccChhHHHhhhhc-ccCCCc--------eecCCCccCccccChhhHHHHHhhccCCCCcccc
Q psy8969 785 EHTSERPFPCPVLGCDRSFTTSNIRKVHIRT-HTGEKP--------YVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQ 855 (1230)
Q Consensus 785 ~ht~ekp~~C~~~~C~k~F~~~~~L~~H~r~-H~gekp--------y~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~ 855 (1230)
.+..+.+|.|.. |++.|.+...|..|++. |.++++ |.|.. |++.|.+...|..|+++|++++||.|.
T Consensus 19 ~~~~~~~~~C~~--C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~ 94 (155)
T 2rpc_A 19 IDEAQLSRPKKS--CDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPR--EGKSFKAKYKLVNHIRVHTGEKPFPCP 94 (155)
T ss_dssp CCTTCCSSSCCC--CCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTT--SSCCCSSHHHHHHHTHHHHCCCSEECS
T ss_pred echhhccccccc--CCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCC--cccccCCHHHHHHHHHhcCCCCcccCC
Confidence 345678899998 99999999999999998 777665 89999 999999999999999999999999997
Q ss_pred ccccccccCCchhHhhhhccccCCCCccCCC--CCcccCChhhHHhHHhhhcCCCCCCC
Q psy8969 856 VRDCQKRFTEYSSLYKHTLVHSDIRPFICDR--CPRSYRQLCTLNVHKKTNHRESKNKK 912 (1230)
Q Consensus 856 ~~~C~k~F~~~~~L~~H~~~H~~ekpy~C~~--Cgk~F~~~~~L~~H~k~hh~~~~~~~ 912 (1230)
++.|++.|.+...|..|+++|++++||.|.. |++.|.+...|..|+++|++++++.+
T Consensus 95 ~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~c 153 (155)
T 2rpc_A 95 FPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPS 153 (155)
T ss_dssp CTTTCCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCCCSCS
T ss_pred cCCCCCccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcCCCCCCC
Confidence 4459999999999999999999999999997 99999999999999999999887654
No 48
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=99.79 E-value=4.2e-20 Score=179.72 Aligned_cols=82 Identities=39% Similarity=0.848 Sum_probs=72.8
Q ss_pred CccCC--CCCCCCCCchhhhccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeecccccCccccchhhHH
Q psy8969 1136 NNVCP--ECKKTFSSAHHMKVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQ 1213 (1230)
Q Consensus 1136 py~C~--~CgK~F~s~s~Lk~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~~e~CGKsF~~ks~Lk 1213 (1230)
+|.|+ .|++.|.+.+.|..|+++|++++||+|+ .|++.|.+...|++|+++|++++||+|.++.||+.|.++.+|.
T Consensus 36 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~ 113 (119)
T 2jp9_A 36 PYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCK--TCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELV 113 (119)
T ss_dssp CEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECT--TTCCEESCHHHHHHHHHHHHTCCCEECCSTTCCCEESSHHHHH
T ss_pred CccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCC--ccCchhCCHHHHHHHHHHhcCCCCeeCCCCCCccccCCHHHHH
Confidence 35677 7999999999999999999999999995 5999999999999999999999999994236999999999999
Q ss_pred HHhhhc
Q psy8969 1214 KHVRTH 1219 (1230)
Q Consensus 1214 rH~R~H 1219 (1230)
+|+++|
T Consensus 114 ~H~~~H 119 (119)
T 2jp9_A 114 RHHNMH 119 (119)
T ss_dssp HHHHTC
T ss_pred HHHhcC
Confidence 999987
No 49
>2qz4_A Paraplegin; AAA+, SPG7, protease, ADP, structural genomics, structural G consortium, SGC, ATP-binding, nucleotide-binding, hydrolase; HET: ADP; 2.22A {Homo sapiens}
Probab=99.79 E-value=7.3e-19 Score=194.97 Aligned_cols=168 Identities=24% Similarity=0.355 Sum_probs=119.0
Q ss_pred cccccChHHHHHHHHHHHHHhhhc------CCCCCceEEEeCCCCCCchHHHHHHHHHhCCCeEEEecCCcchhHHHhhc
Q psy8969 353 DDDHYGMEDVKKRILEFIAVSQLK------GTTQGKILCFYGPPGVGKTSIAKSIARALNREYFRFSVGGMSDVAEIKGH 426 (1230)
Q Consensus 353 ~~d~~G~~~vK~~i~e~l~~~~~~------~~~~~~~llL~GPPG~GKTslak~iA~~l~~~~~~~~~~~~~d~~~i~g~ 426 (1230)
.+|++|++++|+.|.+++...... +...+.++||+||||||||++|++||+.++.+|+.++.+.+.+
T Consensus 5 ~~~i~G~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~vll~G~~GtGKT~la~~la~~~~~~~~~~~~~~~~~------- 77 (262)
T 2qz4_A 5 FKDVAGMHEAKLEVREFVDYLKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAVATEAQVPFLAMAGAEFVE------- 77 (262)
T ss_dssp TTSSCSCHHHHHHHHHHHHHHHCCC------CCCCCEEEEESCTTSSHHHHHHHHHHHHTCCEEEEETTTTSS-------
T ss_pred HHHhCCHHHHHHHHHHHHHHHHCHHHHHHcCCCCCceEEEECCCCCCHHHHHHHHHHHhCCCEEEechHHHHh-------
Confidence 368999999999999887653222 2356678999999999999999999999999999999876544
Q ss_pred cccccccCchhHHHHHHhhcCCC-CEEEEecccccCCCCCC--------ChhhHHHhhcChhhhhhhhhhccCccccCCc
Q psy8969 427 RRTYVGAMPGKVIQCMKKTKTEN-PLVLIDEVDKIGKGYSG--------DPASALLEMLDPEQNANFLDHYLDVPVDLSR 497 (1230)
Q Consensus 427 ~~~~~g~~~g~i~~~~~~~~~~~-pvillDEIDk~~~~~~~--------~~~~all~~ld~~q~~~f~d~~~~~~~d~s~ 497 (1230)
.|.|.....+...|..+.... .||||||||.+...+.. .....|.++|.. ++ +. ....+
T Consensus 78 --~~~~~~~~~~~~~~~~a~~~~~~vl~iDeid~l~~~~~~~~~~~~~~~~~~~l~~ll~~------~~---~~-~~~~~ 145 (262)
T 2qz4_A 78 --VIGGLGAARVRSLFKEARARAPCIVYIDEIDAVGKKRSTTMSGFSNTEEEQTLNQLLVE------MD---GM-GTTDH 145 (262)
T ss_dssp --SSTTHHHHHHHHHHHHHHHTCSEEEEEECC-------------------CHHHHHHHHH------HH---TC-CTTCC
T ss_pred --hccChhHHHHHHHHHHHHhcCCeEEEEeCcchhhccccccccCccchhHHHHHHHHHHH------hh---Cc-CCCCC
Confidence 355555666777777766554 48889999999654321 112233333321 11 11 12358
Q ss_pred eEEEEecCCCCCCCHhhhc--ccc-eeecCCCCHHHHHHHHHHhh
Q psy8969 498 VLFICTANVIDTIPEPLRD--RME-MIDVSGYVAEEKVAIAAQYL 539 (1230)
Q Consensus 498 v~~I~TaN~~~~I~~~L~~--R~~-~i~~~~~~~~e~~~i~~~~l 539 (1230)
+++|+|+|.++.|++++++ ||+ .+.+..++.++...|++.++
T Consensus 146 ~~vi~~tn~~~~ld~~l~~~~R~~~~i~i~~p~~~~r~~il~~~~ 190 (262)
T 2qz4_A 146 VIVLASTNRADILDGALMRPGRLDRHVFIDLPTLQERREIFEQHL 190 (262)
T ss_dssp EEEEEEESCGGGGGSGGGSTTSCCEEEECCSCCHHHHHHHHHHHH
T ss_pred EEEEecCCChhhcCHHHhcCCcCCeEEEeCCcCHHHHHHHHHHHH
Confidence 9999999999999999999 995 67888999999999887765
No 50
>3h4m_A Proteasome-activating nucleotidase; ATPase, PAN, ATP-binding, nucleotide-binding, HY; HET: ADP; 3.11A {Methanocaldococcus jannaschii}
Probab=99.79 E-value=5.3e-19 Score=199.05 Aligned_cols=168 Identities=24% Similarity=0.375 Sum_probs=128.8
Q ss_pred cccccChHHHHHHHHHHHHHhhh-------cCCCCCceEEEeCCCCCCchHHHHHHHHHhCCCeEEEecCCcchhHHHhh
Q psy8969 353 DDDHYGMEDVKKRILEFIAVSQL-------KGTTQGKILCFYGPPGVGKTSIAKSIARALNREYFRFSVGGMSDVAEIKG 425 (1230)
Q Consensus 353 ~~d~~G~~~vK~~i~e~l~~~~~-------~~~~~~~~llL~GPPG~GKTslak~iA~~l~~~~~~~~~~~~~d~~~i~g 425 (1230)
.++++|++++++.|.+++..... .+...+.++||+||||||||++|++||+.++.+|+.++...+..
T Consensus 16 ~~~i~G~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ll~G~~GtGKT~la~~la~~~~~~~~~v~~~~~~~------ 89 (285)
T 3h4m_A 16 YEDIGGLEKQMQEIREVVELPLKHPELFEKVGIEPPKGILLYGPPGTGKTLLAKAVATETNATFIRVVGSELVK------ 89 (285)
T ss_dssp GGGSCSCHHHHHHHHHHTHHHHHCHHHHHHHCCCCCSEEEEESSSSSSHHHHHHHHHHHTTCEEEEEEGGGGCC------
T ss_pred HHHhcCHHHHHHHHHHHHHHHhhCHHHHHhcCCCCCCeEEEECCCCCcHHHHHHHHHHHhCCCEEEEehHHHHH------
Confidence 46899999999999998865322 24466788999999999999999999999999999998755443
Q ss_pred ccccccccCchhHHHHHHhhcCCCC-EEEEecccccCCCCCCC-------hhhHHHhhcChhhhhhhhhhccCccccCCc
Q psy8969 426 HRRTYVGAMPGKVIQCMKKTKTENP-LVLIDEVDKIGKGYSGD-------PASALLEMLDPEQNANFLDHYLDVPVDLSR 497 (1230)
Q Consensus 426 ~~~~~~g~~~g~i~~~~~~~~~~~p-villDEIDk~~~~~~~~-------~~~all~~ld~~q~~~f~d~~~~~~~d~s~ 497 (1230)
.|+|.....+...|..+....| ||||||||.+.....+. ....|+.+|+.. +. . ....+
T Consensus 90 ---~~~~~~~~~~~~~~~~~~~~~~~vl~iDEid~l~~~~~~~~~~~~~~~~~~l~~ll~~~------~~---~-~~~~~ 156 (285)
T 3h4m_A 90 ---KFIGEGASLVKDIFKLAKEKAPSIIFIDEIDAIAAKRTDALTGGDREVQRTLMQLLAEM------DG---F-DARGD 156 (285)
T ss_dssp ---CSTTHHHHHHHHHHHHHHHTCSEEEEEETTHHHHBCCSSSCCGGGGHHHHHHHHHHHHH------HT---T-CSSSS
T ss_pred ---hccchHHHHHHHHHHHHHHcCCeEEEEECHHHhcccCccccCCccHHHHHHHHHHHHHh------hC---C-CCCCC
Confidence 4777777888888888777665 88899999986543221 123344333221 11 0 12357
Q ss_pred eEEEEecCCCCCCCHhhhc--ccc-eeecCCCCHHHHHHHHHHhh
Q psy8969 498 VLFICTANVIDTIPEPLRD--RME-MIDVSGYVAEEKVAIAAQYL 539 (1230)
Q Consensus 498 v~~I~TaN~~~~I~~~L~~--R~~-~i~~~~~~~~e~~~i~~~~l 539 (1230)
++||+|||.++.|++++++ ||. ++.+..|+.++...|++.++
T Consensus 157 ~~vI~ttn~~~~l~~~l~~~~Rf~~~i~~~~p~~~~r~~il~~~~ 201 (285)
T 3h4m_A 157 VKIIGATNRPDILDPAILRPGRFDRIIEVPAPDEKGRLEILKIHT 201 (285)
T ss_dssp EEEEEECSCGGGBCHHHHSTTSEEEEEECCCCCHHHHHHHHHHHH
T ss_pred EEEEEeCCCchhcCHHHcCCCcCCeEEEECCCCHHHHHHHHHHHH
Confidence 9999999999999999999 997 68999999999999987764
No 51
>1lv7_A FTSH; alpha/beta domain, four helix bundle, hydrolase; 1.50A {Escherichia coli} SCOP: c.37.1.20
Probab=99.78 E-value=1.6e-18 Score=192.44 Aligned_cols=222 Identities=21% Similarity=0.291 Sum_probs=149.0
Q ss_pred cccccChHHHHHHHHHHHHHhhh------cCCCCCceEEEeCCCCCCchHHHHHHHHHhCCCeEEEecCCcchhHHHhhc
Q psy8969 353 DDDHYGMEDVKKRILEFIAVSQL------KGTTQGKILCFYGPPGVGKTSIAKSIARALNREYFRFSVGGMSDVAEIKGH 426 (1230)
Q Consensus 353 ~~d~~G~~~vK~~i~e~l~~~~~------~~~~~~~~llL~GPPG~GKTslak~iA~~l~~~~~~~~~~~~~d~~~i~g~ 426 (1230)
.+|++|++.+|+.+.+.+..... .+...+++++|+||||||||++|++||..++.+|+.++...+.+
T Consensus 11 ~~~i~G~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~vll~G~~GtGKT~la~~la~~~~~~~~~i~~~~~~~------- 83 (257)
T 1lv7_A 11 FADVAGCDEAKEEVAELVEYLREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVE------- 83 (257)
T ss_dssp GGGSCSCHHHHHHTHHHHHHHHCGGGC-----CCCCEEEEECCTTSCHHHHHHHHHHHHTCCEEEECSCSSTT-------
T ss_pred HHHhcCcHHHHHHHHHHHHHHhCHHHHHHcCCCCCCeEEEECcCCCCHHHHHHHHHHHcCCCEEEEeHHHHHH-------
Confidence 36899999999999887643211 12334667999999999999999999999999999998766554
Q ss_pred cccccccCchhHHHHHHhhcCCCC-EEEEecccccCCCCCCC-----hh--hHHHhhcChhhhhhhhhhccCccccCCce
Q psy8969 427 RRTYVGAMPGKVIQCMKKTKTENP-LVLIDEVDKIGKGYSGD-----PA--SALLEMLDPEQNANFLDHYLDVPVDLSRV 498 (1230)
Q Consensus 427 ~~~~~g~~~g~i~~~~~~~~~~~p-villDEIDk~~~~~~~~-----~~--~all~~ld~~q~~~f~d~~~~~~~d~s~v 498 (1230)
.++|.....+...|..+....| |+||||||.++...... .. ..+.++|.. ++.+ .+..++
T Consensus 84 --~~~~~~~~~~~~~~~~a~~~~~~il~iDeid~l~~~~~~~~~~~~~~~~~~~~~ll~~------l~~~----~~~~~~ 151 (257)
T 1lv7_A 84 --MFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVE------MDGF----EGNEGI 151 (257)
T ss_dssp --SCCCCCHHHHHHHHHHHHTTCSEEEEETTHHHHTCCCSTTSCCTTCHHHHHHHHHHHH------HHTC----CSSSCE
T ss_pred --HhhhhhHHHHHHHHHHHHHcCCeeehhhhhhhhccCCCCCcCCCchHHHHHHHHHHHH------hhCc----ccCCCE
Confidence 4677777788888888877666 88999999997543211 00 111111110 1111 134679
Q ss_pred EEEEecCCCCCCCHhhhc--ccc-eeecCCCCHHHHHHHHHHhhcchhHHhcCCCCCCcccCHHHHHHHHHHhhhhhhHH
Q psy8969 499 LFICTANVIDTIPEPLRD--RME-MIDVSGYVAEEKVAIAAQYLIPQAMKESGLSPEQITLEPSAIQVLIKNYCRESGVR 575 (1230)
Q Consensus 499 ~~I~TaN~~~~I~~~L~~--R~~-~i~~~~~~~~e~~~i~~~~l~~~~~~~~gl~~~~i~~~~~~~~~li~~~~~e~gvR 575 (1230)
++|+|||.++.|++++++ ||+ .+.+..|+.++...|++.++- ...+. +++....+...|.+..+|
T Consensus 152 ~vI~~tn~~~~l~~~l~r~~rf~~~i~i~~P~~~~r~~il~~~~~-----~~~l~-------~~~~~~~la~~~~G~~~~ 219 (257)
T 1lv7_A 152 IVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMR-----RVPLA-------PDIDAAIIARGTPGFSGA 219 (257)
T ss_dssp EEEEEESCTTTSCGGGGSTTSSCEEEECCCCCHHHHHHHHHHHHT-----TSCBC-------TTCCHHHHHHTCTTCCHH
T ss_pred EEEEeeCCchhCCHHHcCCCcCCeEEEeCCCCHHHHHHHHHHHHh-----cCCCC-------ccccHHHHHHHcCCCCHH
Confidence 999999999999999998 887 577888888898888876642 22222 222223344555555788
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCceEechhhhhhhc
Q psy8969 576 NLQKHIEKVTRKVALTIVKKESDKVTVTNDNLSDFV 611 (1230)
Q Consensus 576 ~l~~~i~~i~r~~~~~~~~~~~~~~~i~~~~~~~~~ 611 (1230)
.|+..+......+.. .. ...|+.+++.+.+
T Consensus 220 dl~~l~~~a~~~a~~----~~--~~~i~~~~~~~a~ 249 (257)
T 1lv7_A 220 DLANLVNEAALFAAR----GN--KRVVSMVEFEKAK 249 (257)
T ss_dssp HHHHHHHHHHHHHHH----TT--CSSBCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH----hC--CCcccHHHHHHHH
Confidence 887766654433222 11 2247777776554
No 52
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=99.78 E-value=2.3e-19 Score=175.65 Aligned_cols=82 Identities=29% Similarity=0.664 Sum_probs=52.4
Q ss_pred ccCCCCCCCCCCchhhhccccc---cCCCCcccCCcccccccccCchhhhhhcccccCCCCEeecccccCccccchhhHH
Q psy8969 1137 NVCPECKKTFSSAHHMKVHLRI---HSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQ 1213 (1230)
Q Consensus 1137 y~C~~CgK~F~s~s~Lk~H~R~---HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~~e~CGKsF~~ks~Lk 1213 (1230)
|.|+.|++.|.+...|.+|++. |++++||.|+ .|++.|.+...|.+|+++|++++||.|. +|++.|.++.+|.
T Consensus 36 ~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~ 111 (124)
T 2dlq_A 36 FECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCS--VCQETFRRRMELRLHMVSHTGEMPYKCS--SCSQQFMQKKDLQ 111 (124)
T ss_dssp CBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECS--SSCCEESSHHHHHHHHHHHSSSCSEECS--SSCCEESSHHHHH
T ss_pred eECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECC--CCCCccCCHHHHHHHHHHcCCCCCccCC--CccchhCCHHHHH
Confidence 4466666666666666666552 4566666674 3777777777777777777777777773 5777777777777
Q ss_pred HHhh-hccCc
Q psy8969 1214 KHVR-THTDE 1222 (1230)
Q Consensus 1214 rH~R-~HtGE 1222 (1230)
+|++ .|.|+
T Consensus 112 ~H~~~~H~~~ 121 (124)
T 2dlq_A 112 SHMIKLHSGP 121 (124)
T ss_dssp HHHHHTSSCS
T ss_pred HHHHHHCCCC
Confidence 7765 35554
No 53
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=99.78 E-value=1.7e-19 Score=172.23 Aligned_cols=94 Identities=31% Similarity=0.605 Sum_probs=88.5
Q ss_pred ccCCCCCccCCCCCCCCCCchhhhccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeecccccCccccch
Q psy8969 1130 KSTSSENNVCPECKKTFSSAHHMKVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTS 1209 (1230)
Q Consensus 1130 ~~t~~kpy~C~~CgK~F~s~s~Lk~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~~e~CGKsF~~k 1209 (1230)
.....++|.|+.|++.|.+...|.+|+++|++++||+|+ .|++.|.+...|.+|+++|++++||.|. +|++.|.+.
T Consensus 11 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~ 86 (106)
T 2ee8_A 11 PSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCD--ICHKAFRRQDHLRDHRYIHSKEKPFKCQ--ECGKGFCQS 86 (106)
T ss_dssp CCCCCCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCS--SSCCBCSCHHHHHHHGGGSCCCCTTSCS--SSCCCCSSH
T ss_pred CcCCCcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC--CccchhCCHHHHHHHHHHhCCCCCeECC--CcCCcccCH
Confidence 446678999999999999999999999999999999995 5999999999999999999999999994 799999999
Q ss_pred hhHHHHhhhccCcccccc
Q psy8969 1210 GDLQKHVRTHTDEFQMSG 1227 (1230)
Q Consensus 1210 s~LkrH~R~HtGE~~~s~ 1227 (1230)
..|.+|+++|+++..+.+
T Consensus 87 ~~L~~H~~~H~~~~~~~~ 104 (106)
T 2ee8_A 87 RTLAVHKTLHMQTSSPTA 104 (106)
T ss_dssp HHHHHHHHHTTSCCCCCC
T ss_pred HHHHHHHHHhCCCCCCcC
Confidence 999999999999998764
No 54
>3d8b_A Fidgetin-like protein 1; AAA+, ATPase, ADP, SGC, structural genomics consortium, ATP- hydrolase, magnesium, metal-binding, nucleotide-binding; HET: ADP; 2.00A {Homo sapiens}
Probab=99.78 E-value=1.7e-18 Score=201.96 Aligned_cols=190 Identities=22% Similarity=0.330 Sum_probs=134.3
Q ss_pred ccccChHHHHHHHHHHHHHhhhcC------CCCCceEEEeCCCCCCchHHHHHHHHHhCCCeEEEecCCcchhHHHhhcc
Q psy8969 354 DDHYGMEDVKKRILEFIAVSQLKG------TTQGKILCFYGPPGVGKTSIAKSIARALNREYFRFSVGGMSDVAEIKGHR 427 (1230)
Q Consensus 354 ~d~~G~~~vK~~i~e~l~~~~~~~------~~~~~~llL~GPPG~GKTslak~iA~~l~~~~~~~~~~~~~d~~~i~g~~ 427 (1230)
+|++|++++|+.|.+.+....... ...+.++||+||||||||++|++||+.++.+|+.++.+.+.+
T Consensus 84 ~~i~G~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~vLl~GppGtGKT~la~aia~~~~~~~~~i~~~~l~~-------- 155 (357)
T 3d8b_A 84 EDIAGVEFAKATIKEIVVWPMLRPDIFTGLRGPPKGILLFGPPGTGKTLIGKCIASQSGATFFSISASSLTS-------- 155 (357)
T ss_dssp GGSCSCHHHHHHHHHHTHHHHHCTTTSCGGGSCCSEEEEESSTTSSHHHHHHHHHHHTTCEEEEEEGGGGCC--------
T ss_pred HHhCChHHHHHHHHHHHHHHhhChHhHhhccCCCceEEEECCCCCCHHHHHHHHHHHcCCeEEEEehHHhhc--------
Confidence 689999999999999987543221 135678999999999999999999999999999999765543
Q ss_pred ccccccCchhHHHHHHhhcCCC-CEEEEecccccCCCCCCChhhHHHhhcChhhhhhhhhhccCcc-ccCCceEEEEecC
Q psy8969 428 RTYVGAMPGKVIQCMKKTKTEN-PLVLIDEVDKIGKGYSGDPASALLEMLDPEQNANFLDHYLDVP-VDLSRVLFICTAN 505 (1230)
Q Consensus 428 ~~~~g~~~g~i~~~~~~~~~~~-pvillDEIDk~~~~~~~~~~~all~~ld~~q~~~f~d~~~~~~-~d~s~v~~I~TaN 505 (1230)
.|+|+....+...|..+.... .||||||||.+...+..........++ ..++..+.+.. ....+++||+|||
T Consensus 156 -~~~g~~~~~~~~~~~~a~~~~~~vl~iDEid~l~~~~~~~~~~~~~~~~-----~~lL~~l~~~~~~~~~~v~vI~atn 229 (357)
T 3d8b_A 156 -KWVGEGEKMVRALFAVARCQQPAVIFIDEIDSLLSQRGDGEHESSRRIK-----TEFLVQLDGATTSSEDRILVVGATN 229 (357)
T ss_dssp -SSTTHHHHHHHHHHHHHHHTCSEEEEEETHHHHTBC------CHHHHHH-----HHHHHHHHC----CCCCEEEEEEES
T ss_pred -cccchHHHHHHHHHHHHHhcCCeEEEEeCchhhhccCCCCcchHHHHHH-----HHHHHHHhcccccCCCCEEEEEecC
Confidence 477777777777777776554 489999999997543221111111111 11121111111 1235899999999
Q ss_pred CCCCCCHhhhcccc-eeecCCCCHHHHHHHHHHhhcchhHHhcCCCCCCcccCHHHHHHHHHH
Q psy8969 506 VIDTIPEPLRDRME-MIDVSGYVAEEKVAIAAQYLIPQAMKESGLSPEQITLEPSAIQVLIKN 567 (1230)
Q Consensus 506 ~~~~I~~~L~~R~~-~i~~~~~~~~e~~~i~~~~l~~~~~~~~gl~~~~i~~~~~~~~~li~~ 567 (1230)
.++.|+++|++||. ++.+..++.++...|+..++ ... .+.++++.+..|++.
T Consensus 230 ~~~~l~~~l~~Rf~~~i~i~~p~~~~r~~il~~~~-----~~~-----~~~l~~~~l~~la~~ 282 (357)
T 3d8b_A 230 RPQEIDEAARRRLVKRLYIPLPEASARKQIVINLM-----SKE-----QCCLSEEEIEQIVQQ 282 (357)
T ss_dssp CGGGBCHHHHTTCCEEEECCCCCHHHHHHHHHHHH-----HTS-----CBCCCHHHHHHHHHH
T ss_pred ChhhCCHHHHhhCceEEEeCCcCHHHHHHHHHHHH-----hhc-----CCCccHHHHHHHHHH
Confidence 99999999999998 67888899999888876654 222 345677777777654
No 55
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=99.77 E-value=1.9e-19 Score=168.47 Aligned_cols=92 Identities=37% Similarity=0.746 Sum_probs=86.5
Q ss_pred cCCCCCccCCCCCCCCCCchhhhccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeecccccCccccchh
Q psy8969 1131 STSSENNVCPECKKTFSSAHHMKVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSG 1210 (1230)
Q Consensus 1131 ~t~~kpy~C~~CgK~F~s~s~Lk~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~~e~CGKsF~~ks 1210 (1230)
+.++++|.|+.|++.|.+...|.+|+++|++++||+|+ .|++.|.+...|.+|+++|++++||.|. +|++.|.+..
T Consensus 3 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~ 78 (96)
T 2dmd_A 3 SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCK--TCDYAAADSSSLNKHLRIHSDERPFKCQ--ICPYASRNSS 78 (96)
T ss_dssp CCCCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECS--SSCCEESSHHHHHHHHHHSCCCCCEECS--SSSCEESSHH
T ss_pred CCCCcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCC--CCCCccCCHHHHHHHHHHhCCCCCccCC--CCCCccCCHH
Confidence 35678999999999999999999999999999999995 5999999999999999999999999994 7999999999
Q ss_pred hHHHHhhhccCccccc
Q psy8969 1211 DLQKHVRTHTDEFQMS 1226 (1230)
Q Consensus 1211 ~LkrH~R~HtGE~~~s 1226 (1230)
+|.+|+++|+|+..-+
T Consensus 79 ~l~~H~~~h~~~~~p~ 94 (96)
T 2dmd_A 79 QLTVHLRSHTGDSGPS 94 (96)
T ss_dssp HHHHHHTTCCSCCCCC
T ss_pred HHHHHHHHhcCCCCCC
Confidence 9999999999997654
No 56
>3b9p_A CG5977-PA, isoform A; AAA ATPase, ATP-binding, nucleotide-binding, hydrolase; 2.70A {Drosophila melanogaster}
Probab=99.76 E-value=7.6e-18 Score=190.84 Aligned_cols=196 Identities=22% Similarity=0.312 Sum_probs=135.3
Q ss_pred cccccChHHHHHHHHHHHHHhhhcC------CCCCceEEEeCCCCCCchHHHHHHHHHhCCCeEEEecCCcchhHHHhhc
Q psy8969 353 DDDHYGMEDVKKRILEFIAVSQLKG------TTQGKILCFYGPPGVGKTSIAKSIARALNREYFRFSVGGMSDVAEIKGH 426 (1230)
Q Consensus 353 ~~d~~G~~~vK~~i~e~l~~~~~~~------~~~~~~llL~GPPG~GKTslak~iA~~l~~~~~~~~~~~~~d~~~i~g~ 426 (1230)
.++++|++++|+.|.+.+....... ...+.++||+||||||||++|++||+.++.+|+.++.+.+..
T Consensus 20 ~~~i~G~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~vll~Gp~GtGKT~la~~la~~~~~~~~~i~~~~l~~------- 92 (297)
T 3b9p_A 20 WTDIAGQDVAKQALQEMVILPSVRPELFTGLRAPAKGLLLFGPPGNGKTLLARAVATECSATFLNISAASLTS------- 92 (297)
T ss_dssp GGGSCCCHHHHHHHHHHTHHHHHCGGGSCGGGCCCSEEEEESSSSSCHHHHHHHHHHHTTCEEEEEESTTTSS-------
T ss_pred HHHhCChHHHHHHHHHHHHhhhhCHHHHhcCCCCCCeEEEECcCCCCHHHHHHHHHHHhCCCeEEeeHHHHhh-------
Confidence 4689999999999999886543211 134678999999999999999999999999999999766543
Q ss_pred cccccccCchhHHHHHHhhcCCCC-EEEEecccccCCCCCCCh-------hhHHHhhcChhhhhhhhhhccCccccCCce
Q psy8969 427 RRTYVGAMPGKVIQCMKKTKTENP-LVLIDEVDKIGKGYSGDP-------ASALLEMLDPEQNANFLDHYLDVPVDLSRV 498 (1230)
Q Consensus 427 ~~~~~g~~~g~i~~~~~~~~~~~p-villDEIDk~~~~~~~~~-------~~all~~ld~~q~~~f~d~~~~~~~d~s~v 498 (1230)
.|+|+....+...|..+...+| ||||||||.+........ .+.|+..+|... ...+..++
T Consensus 93 --~~~~~~~~~~~~~~~~~~~~~~~vl~iDEid~l~~~~~~~~~~~~~~~~~~ll~~l~~~~----------~~~~~~~v 160 (297)
T 3b9p_A 93 --KYVGDGEKLVRALFAVARHMQPSIIFIDEVDSLLSERSSSEHEASRRLKTEFLVEFDGLP----------GNPDGDRI 160 (297)
T ss_dssp --SSCSCHHHHHHHHHHHHHHTCSEEEEEETGGGTSBCC-----CCSHHHHHHHHHHHHHCC----------------CE
T ss_pred --cccchHHHHHHHHHHHHHHcCCcEEEeccHHHhccccccCcchHHHHHHHHHHHHHhccc----------ccCCCCcE
Confidence 4667766677777777765555 899999999975432211 122333332210 01123579
Q ss_pred EEEEecCCCCCCCHhhhcccc-eeecCCCCHHHHHHHHHHhhcchhHHhcCCCCCCcccCHHHHHHHHHHhhhhhhHHHH
Q psy8969 499 LFICTANVIDTIPEPLRDRME-MIDVSGYVAEEKVAIAAQYLIPQAMKESGLSPEQITLEPSAIQVLIKNYCRESGVRNL 577 (1230)
Q Consensus 499 ~~I~TaN~~~~I~~~L~~R~~-~i~~~~~~~~e~~~i~~~~l~~~~~~~~gl~~~~i~~~~~~~~~li~~~~~e~gvR~l 577 (1230)
+||+|||.++.|++++++||. .+.+..++.++...|+..++- ..+ ..++++++..+.+. +.+..-+.|
T Consensus 161 ~vi~~tn~~~~l~~~l~~R~~~~i~~~~p~~~~r~~il~~~~~-----~~~-----~~~~~~~~~~la~~-~~g~~~~~l 229 (297)
T 3b9p_A 161 VVLAATNRPQELDEAALRRFTKRVYVSLPDEQTRELLLNRLLQ-----KQG-----SPLDTEALRRLAKI-TDGYSGSDL 229 (297)
T ss_dssp EEEEEESCGGGBCHHHHHHCCEEEECCCCCHHHHHHHHHHHHG-----GGS-----CCSCHHHHHHHHHH-TTTCCHHHH
T ss_pred EEEeecCChhhCCHHHHhhCCeEEEeCCcCHHHHHHHHHHHHH-----hcC-----CCCCHHHHHHHHHH-cCCCCHHHH
Confidence 999999999999999999996 677888888888888776542 222 34667777776643 443333344
Q ss_pred H
Q psy8969 578 Q 578 (1230)
Q Consensus 578 ~ 578 (1230)
+
T Consensus 230 ~ 230 (297)
T 3b9p_A 230 T 230 (297)
T ss_dssp H
T ss_pred H
Confidence 3
No 57
>2x8a_A Nuclear valosin-containing protein-like; nuclear protein; 2.60A {Homo sapiens}
Probab=99.76 E-value=1.6e-18 Score=194.93 Aligned_cols=241 Identities=18% Similarity=0.244 Sum_probs=145.3
Q ss_pred hhcccccChHHHHHHHHHHHHHhhh-------cCCCCCceEEEeCCCCCCchHHHHHHHHHhCCCeEEEecCCcchhHHH
Q psy8969 351 ILDDDHYGMEDVKKRILEFIAVSQL-------KGTTQGKILCFYGPPGVGKTSIAKSIARALNREYFRFSVGGMSDVAEI 423 (1230)
Q Consensus 351 ~l~~d~~G~~~vK~~i~e~l~~~~~-------~~~~~~~~llL~GPPG~GKTslak~iA~~l~~~~~~~~~~~~~d~~~i 423 (1230)
+-++|++|++++|+.|.+.+..... -+...+++++|+||||||||+||++||..++.+++.++...+.+
T Consensus 7 ~~~~di~g~~~~~~~l~~~i~~~~~~~~~l~~~~l~~~~GvlL~Gp~GtGKTtLakala~~~~~~~i~i~g~~l~~---- 82 (274)
T 2x8a_A 7 VTWADIGALEDIREELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLN---- 82 (274)
T ss_dssp -----CCHHHHHHHHHHHHHTHHHHSHHHHHHTTCCCCSEEEEESSTTSCHHHHHHHHHHHTTCEEEEEETTTTCS----
T ss_pred CCHHHhCCHHHHHHHHHHHHHHHhhCHHHHHHcCCCCCCeEEEECCCCCcHHHHHHHHHHHcCCCEEEEEcHHHHh----
Confidence 4458999999999999987643221 13455567999999999999999999999999999888655543
Q ss_pred hhccccccccCchhHHHHHHhhcCCCC-EEEEecccccCCCCCCChhhHHHhhcChhhhhhhhhhccCccccCCceEEEE
Q psy8969 424 KGHRRTYVGAMPGKVIQCMKKTKTENP-LVLIDEVDKIGKGYSGDPASALLEMLDPEQNANFLDHYLDVPVDLSRVLFIC 502 (1230)
Q Consensus 424 ~g~~~~~~g~~~g~i~~~~~~~~~~~p-villDEIDk~~~~~~~~~~~all~~ld~~q~~~f~d~~~~~~~d~s~v~~I~ 502 (1230)
.|+|.....+...|..+....| |+|+||||.+...+...... .+.. ....++..+.+. -....+++++
T Consensus 83 -----~~~~~~~~~i~~vf~~a~~~~p~i~~~Deid~~~~~r~~~~~~----~~~~-~~~~~l~~Lsgg-~~~~~~i~ia 151 (274)
T 2x8a_A 83 -----MYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSDRETG----ASVR-VVNQLLTEMDGL-EARQQVFIMA 151 (274)
T ss_dssp -----STTHHHHHHHHHHHHHHHHTCSEEEEEETCTTTCC-------------CTT-HHHHHHHHHHTC-CSTTCEEEEE
T ss_pred -----hhhhHHHHHHHHHHHHHHhcCCCeEeeehhhhhhcccCCCcch----HHHH-HHHHHHHhhhcc-cccCCEEEEe
Confidence 4666666777788887754444 88899999986532211111 1111 111122222111 1235688899
Q ss_pred ecCCCCCCCHhhhc--ccc-eeecCCCCHHHHHHHHHHhhcchhH--HhcCCCCCCccc---CHHHHHHHHHHhhhhhhH
Q psy8969 503 TANVIDTIPEPLRD--RME-MIDVSGYVAEEKVAIAAQYLIPQAM--KESGLSPEQITL---EPSAIQVLIKNYCRESGV 574 (1230)
Q Consensus 503 TaN~~~~I~~~L~~--R~~-~i~~~~~~~~e~~~i~~~~l~~~~~--~~~gl~~~~i~~---~~~~~~~li~~~~~e~gv 574 (1230)
++|.++.||+|+++ ||+ .|.++.++.++...|++.++-.... ...+++.+.+.- +++...+.|...|++|.+
T Consensus 152 ~tn~p~~LD~al~r~gRfd~~i~~~~P~~~~r~~il~~~~~~~~~~~~~~~~~~~~la~~~~~~g~sgadl~~l~~~a~~ 231 (274)
T 2x8a_A 152 ATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTITKNGTKPPLDADVNLEAIAGDLRCDCYTGADLSALVREASI 231 (274)
T ss_dssp EESCGGGSCHHHHSTTSSCEEEECCSCCHHHHHHHHHHHTTTTBTTBBCTTCCHHHHHTCSGGGSCCHHHHHHHHHHHHH
T ss_pred ecCChhhCCHhhcCcccCCeEEEeCCcCHHHHHHHHHHHHhcccCCCCccccCHHHHHHhhccCCcCHHHHHHHHHHHHH
Confidence 99999999999998 998 4678888888999998876521100 011122112211 123445556666777777
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCceEechhhhhhhcCC
Q psy8969 575 RNLQKHIEKVTRKVALTIVKKESDKVTVTNDNLSDFVGK 613 (1230)
Q Consensus 575 R~l~~~i~~i~r~~~~~~~~~~~~~~~i~~~~~~~~~~~ 613 (1230)
..+++.+..--. ........|+.+++.+.+..
T Consensus 232 ~a~~~~~~~~~~-------~~~~~~~~i~~~df~~al~~ 263 (274)
T 2x8a_A 232 CALRQEMARQKS-------GNEKGELKVSHKHFEEAFKK 263 (274)
T ss_dssp HHHHHHC------------------CCBCHHHHHHHHTT
T ss_pred HHHHHHHhhccc-------cccccCCeecHHHHHHHHHH
Confidence 766654432100 01112346777777776653
No 58
>2ce7_A Cell division protein FTSH; metalloprotease; HET: ADP; 2.44A {Thermotoga maritima} SCOP: a.269.1.1 c.37.1.20 PDB: 2cea_A* 3kds_E*
Probab=99.76 E-value=7.6e-18 Score=202.29 Aligned_cols=164 Identities=24% Similarity=0.362 Sum_probs=123.6
Q ss_pred ccccChHHHHHHHHHHHHHhhh------cCCCCCceEEEeCCCCCCchHHHHHHHHHhCCCeEEEecCCcchhHHHhhcc
Q psy8969 354 DDHYGMEDVKKRILEFIAVSQL------KGTTQGKILCFYGPPGVGKTSIAKSIARALNREYFRFSVGGMSDVAEIKGHR 427 (1230)
Q Consensus 354 ~d~~G~~~vK~~i~e~l~~~~~------~~~~~~~~llL~GPPG~GKTslak~iA~~l~~~~~~~~~~~~~d~~~i~g~~ 427 (1230)
+|++|++++|+.+.+.+..... .+...++++||+||||||||+||++||..++.+|+.++.+.+.+
T Consensus 16 ~di~G~~~~~~~l~e~v~~l~~~~~~~~~g~~~p~gvLL~GppGtGKT~Laraia~~~~~~f~~is~~~~~~-------- 87 (476)
T 2ce7_A 16 KDVGGAEEAIEELKEVVEFLKDPSKFNRIGARMPKGILLVGPPGTGKTLLARAVAGEANVPFFHISGSDFVE-------- 87 (476)
T ss_dssp GGCCSCHHHHHHHHHHHHHHHCTHHHHTTTCCCCSEEEEECCTTSSHHHHHHHHHHHHTCCEEEEEGGGTTT--------
T ss_pred HHhCCcHHHHHHHHHHHHHhhChHHHhhcCCCCCCeEEEECCCCCCHHHHHHHHHHHcCCCeeeCCHHHHHH--------
Confidence 6899999999999887653211 13345678999999999999999999999999999998765544
Q ss_pred ccccccCchhHHHHHHhhcCCCC-EEEEecccccCCCCCC-----Ch-----hhHHHhhcChhhhhhhhhhccCccccCC
Q psy8969 428 RTYVGAMPGKVIQCMKKTKTENP-LVLIDEVDKIGKGYSG-----DP-----ASALLEMLDPEQNANFLDHYLDVPVDLS 496 (1230)
Q Consensus 428 ~~~~g~~~g~i~~~~~~~~~~~p-villDEIDk~~~~~~~-----~~-----~~all~~ld~~q~~~f~d~~~~~~~d~s 496 (1230)
.|+|....++...|..+....| ||||||||.++..+.. ++ .+.||..+|. + -...
T Consensus 88 -~~~g~~~~~~r~lf~~A~~~~p~ILfIDEid~l~~~r~~~~~g~~~~~~~~l~~LL~~ld~---------~----~~~~ 153 (476)
T 2ce7_A 88 -LFVGVGAARVRDLFAQAKAHAPCIVFIDEIDAVGRHRGAGLGGGHDEREQTLNQLLVEMDG---------F----DSKE 153 (476)
T ss_dssp -CCTTHHHHHHHHHHHHHHHTCSEEEEEETGGGTCCC---------CHHHHHHHHHHHHHHH---------S----CGGG
T ss_pred -HHhcccHHHHHHHHHHHHhcCCCEEEEechhhhhhhcccccCcCcHHHHHHHHHHHHHHhc---------c----CCCC
Confidence 4677767778888888876655 8889999999765421 11 1222222221 1 1125
Q ss_pred ceEEEEecCCCCCCCHhhhc--ccc-eeecCCCCHHHHHHHHHHhh
Q psy8969 497 RVLFICTANVIDTIPEPLRD--RME-MIDVSGYVAEEKVAIAAQYL 539 (1230)
Q Consensus 497 ~v~~I~TaN~~~~I~~~L~~--R~~-~i~~~~~~~~e~~~i~~~~l 539 (1230)
+|++|+|||+++.|+++|++ ||+ .|.+..|+.++...|++.++
T Consensus 154 ~viVIaaTn~~~~Ld~allR~gRFd~~i~i~~Pd~~~R~~Il~~~~ 199 (476)
T 2ce7_A 154 GIIVMAATNRPDILDPALLRPGRFDKKIVVDPPDMLGRKKILEIHT 199 (476)
T ss_dssp TEEEEEEESCGGGSCGGGGSTTSSCEEEECCCCCHHHHHHHHHHHH
T ss_pred CEEEEEecCChhhhchhhcccCcceeEeecCCCCHHHHHHHHHHHH
Confidence 79999999999999999997 998 67888899999988887665
No 59
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=99.75 E-value=3e-19 Score=164.90 Aligned_cols=86 Identities=36% Similarity=0.843 Sum_probs=80.1
Q ss_pred CCCccCC--CCCCCCCCchhhhccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeecccccCccccchhh
Q psy8969 1134 SENNVCP--ECKKTFSSAHHMKVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGD 1211 (1230)
Q Consensus 1134 ~kpy~C~--~CgK~F~s~s~Lk~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~~e~CGKsF~~ks~ 1211 (1230)
+++|.|+ .|++.|.+.+.|.+|+++|++++||.|+ .|++.|.+...|+.|+++|++++||.|. .|++.|.++.+
T Consensus 2 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~ 77 (90)
T 1a1h_A 2 ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCR--ICMRNFSRSDHLTTHIRTHTGEKPFACD--ICGRKFARSDE 77 (90)
T ss_dssp -CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECT--TTCCEESCHHHHHHHHHHHHCCCCEECT--TTCCEESSHHH
T ss_pred CCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCC--CCCcccCCHHHHHHHHHHcCCCCCccCC--CCCchhCCHHH
Confidence 5789998 6999999999999999999999999995 5999999999999999999999999994 79999999999
Q ss_pred HHHHhhhccCcc
Q psy8969 1212 LQKHVRTHTDEF 1223 (1230)
Q Consensus 1212 LkrH~R~HtGE~ 1223 (1230)
|.+|+++|+|++
T Consensus 78 l~~H~~~H~~~k 89 (90)
T 1a1h_A 78 RKRHTKIHLRQK 89 (90)
T ss_dssp HHHHHGGGGC--
T ss_pred HHHHHHHhcccC
Confidence 999999999985
No 60
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=99.74 E-value=3.5e-19 Score=161.34 Aligned_cols=82 Identities=43% Similarity=0.812 Sum_probs=78.3
Q ss_pred CccCCCCCCCCCCchhhhccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeecccccCccccchhhHHHH
Q psy8969 1136 NNVCPECKKTFSSAHHMKVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKH 1215 (1230)
Q Consensus 1136 py~C~~CgK~F~s~s~Lk~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~~e~CGKsF~~ks~LkrH 1215 (1230)
||.|+.|++.|.+.+.|..|+++|++++||+|+ .|++.|.++..|.+|+++|++++||.|. .||+.|.++.+|.+|
T Consensus 1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H 76 (82)
T 2kmk_A 1 SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQ--YCGKRFHQKSDMKKHTFIHTGEKPHKCQ--VCGKAFSQSSNLITH 76 (82)
T ss_dssp CEECSSSCCEESSHHHHHHHHHHHHTCCCEECS--SSCCEESSHHHHHHHHHHHHTCCCEECT--TTSCEESSHHHHHHH
T ss_pred CccCCCCcccccCchhHHHHHHHcCCCCCeeCC--cCChhhCCHHHHHHHHHHhcCCCCCcCC--CcchhhCChHHHHHH
Confidence 589999999999999999999999999999995 5999999999999999999999999994 799999999999999
Q ss_pred hhhccC
Q psy8969 1216 VRTHTD 1221 (1230)
Q Consensus 1216 ~R~HtG 1221 (1230)
+++|+|
T Consensus 77 ~~~H~g 82 (82)
T 2kmk_A 77 SRKHTG 82 (82)
T ss_dssp HHHHC-
T ss_pred HHhhCC
Confidence 999986
No 61
>3pvs_A Replication-associated recombination protein A; maintenance of genome stability Pro recombination; 2.50A {Escherichia coli}
Probab=99.74 E-value=1.9e-17 Score=198.34 Aligned_cols=219 Identities=20% Similarity=0.288 Sum_probs=151.6
Q ss_pred ccccChHHHH---HHHHHHHHHhhhcCCCCCceEEEeCCCCCCchHHHHHHHHHhCCCeEEEecCCcchhHHHhhccccc
Q psy8969 354 DDHYGMEDVK---KRILEFIAVSQLKGTTQGKILCFYGPPGVGKTSIAKSIARALNREYFRFSVGGMSDVAEIKGHRRTY 430 (1230)
Q Consensus 354 ~d~~G~~~vK---~~i~e~l~~~~~~~~~~~~~llL~GPPG~GKTslak~iA~~l~~~~~~~~~~~~~d~~~i~g~~~~~ 430 (1230)
++++|++.++ +.+...+... ..+.++|+||||||||++|++||+.++.+|+.++..+... .++++.
T Consensus 26 ~~ivGq~~~~~~~~~L~~~i~~~------~~~~vLL~GppGtGKTtlAr~ia~~~~~~f~~l~a~~~~~-~~ir~~---- 94 (447)
T 3pvs_A 26 AQYIGQQHLLAAGKPLPRAIEAG------HLHSMILWGPPGTGKTTLAEVIARYANADVERISAVTSGV-KEIREA---- 94 (447)
T ss_dssp TTCCSCHHHHSTTSHHHHHHHHT------CCCEEEEECSTTSSHHHHHHHHHHHTTCEEEEEETTTCCH-HHHHHH----
T ss_pred HHhCCcHHHHhchHHHHHHHHcC------CCcEEEEECCCCCcHHHHHHHHHHHhCCCeEEEEeccCCH-HHHHHH----
Confidence 5799999999 7777777532 2257999999999999999999999999999998654321 111110
Q ss_pred cccCchhHHHHHHh-hcCCCCEEEEecccccCCCCCCChhhHHHhhcChhhhhhhhhhccCccccCCceEEEEec--CCC
Q psy8969 431 VGAMPGKVIQCMKK-TKTENPLVLIDEVDKIGKGYSGDPASALLEMLDPEQNANFLDHYLDVPVDLSRVLFICTA--NVI 507 (1230)
Q Consensus 431 ~g~~~g~i~~~~~~-~~~~~pvillDEIDk~~~~~~~~~~~all~~ld~~q~~~f~d~~~~~~~d~s~v~~I~Ta--N~~ 507 (1230)
+..+... ......||||||||.+... ..++||..|+. ..++||++| |..
T Consensus 95 -------~~~a~~~~~~~~~~iLfIDEI~~l~~~----~q~~LL~~le~-----------------~~v~lI~att~n~~ 146 (447)
T 3pvs_A 95 -------IERARQNRNAGRRTILFVDEVHRFNKS----QQDAFLPHIED-----------------GTITFIGATTENPS 146 (447)
T ss_dssp -------HHHHHHHHHTTCCEEEEEETTTCC----------CCHHHHHT-----------------TSCEEEEEESSCGG
T ss_pred -------HHHHHHhhhcCCCcEEEEeChhhhCHH----HHHHHHHHHhc-----------------CceEEEecCCCCcc
Confidence 0011100 1234569999999998542 23344444432 346666444 777
Q ss_pred CCCCHhhhcccceeecCCCCHHHHHHHHHHhhcchhHHhcCCCCCCcccCHHHHHHHHHHhhhhhhHHHHHHHHHHHHHH
Q psy8969 508 DTIPEPLRDRMEMIDVSGYVAEEKVAIAAQYLIPQAMKESGLSPEQITLEPSAIQVLIKNYCRESGVRNLQKHIEKVTRK 587 (1230)
Q Consensus 508 ~~I~~~L~~R~~~i~~~~~~~~e~~~i~~~~l~~~~~~~~gl~~~~i~~~~~~~~~li~~~~~e~gvR~l~~~i~~i~r~ 587 (1230)
..|+++|++|+.++.+..++.++...++.+++.. ...++....+.++++++..|++. ..+++|.+...++.++..
T Consensus 147 ~~l~~aL~sR~~v~~l~~l~~edi~~il~~~l~~---~~~~~~~~~~~i~~~al~~L~~~--~~Gd~R~lln~Le~a~~~ 221 (447)
T 3pvs_A 147 FELNSALLSRARVYLLKSLSTEDIEQVLTQAMED---KTRGYGGQDIVLPDETRRAIAEL--VNGDARRALNTLEMMADM 221 (447)
T ss_dssp GSSCHHHHTTEEEEECCCCCHHHHHHHHHHHHHC---TTTSSTTSSEECCHHHHHHHHHH--HCSCHHHHHHHHHHHHHH
T ss_pred cccCHHHhCceeEEeeCCcCHHHHHHHHHHHHHH---HhhhhccccCcCCHHHHHHHHHH--CCCCHHHHHHHHHHHHHh
Confidence 8999999999999999999999999999887633 13456667889999999999876 467899998888876542
Q ss_pred HHHHHhhcCCCceEechhhhhhhcCCCcccccc
Q psy8969 588 VALTIVKKESDKVTVTNDNLSDFVGKPIFSHDR 620 (1230)
Q Consensus 588 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 620 (1230)
. .........||.+.+.+.++.....+++
T Consensus 222 a----~~~~~~~~~It~e~v~~~l~~~~~~~dk 250 (447)
T 3pvs_A 222 A----EVDDSGKRVLKPELLTEIAGERSARFDN 250 (447)
T ss_dssp S----CBCTTSCEECCHHHHHHHHTCCCCC---
T ss_pred c----ccccCCCCccCHHHHHHHHhhhhhccCC
Confidence 1 0011134579999999999877655543
No 62
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.73 E-value=2e-18 Score=167.41 Aligned_cols=102 Identities=19% Similarity=0.278 Sum_probs=91.2
Q ss_pred CCCCCcccccCCCCCccCCCCCCCCCCchhhhccccc--cCCCCccc-CCcccccccc--cCchhhhhhcccccCCCCEe
Q psy8969 1122 GGGGGTVKKSTSSENNVCPECKKTFSSAHHMKVHLRI--HSGIRPYK-CPVEYCEKAF--STQYSRKAHIRTHTGEKPYR 1196 (1230)
Q Consensus 1122 ~~~~~~~~~~t~~kpy~C~~CgK~F~s~s~Lk~H~R~--HTGEKPyk-Cpve~CgKsF--~~ks~Lk~H~RtHTGEKPy~ 1196 (1230)
.....+...|+++++|.|+.|++.|.+.+.|..|+++ |++++||. |+ .|++.| .++..|.+|+++|++++||.
T Consensus 5 ~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~--~C~~~f~f~~~~~l~~H~~~H~~~~~~~ 82 (115)
T 2dmi_A 5 SSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDN--NNPKRWSKPRKRSLLEMEGKEDAQKVLK 82 (115)
T ss_dssp CCCCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCC--CCCSCCSSCCCCCCCCCCCSCCCCSSCB
T ss_pred hhhhhheeeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCC--CCCcccccccHHHHHHHhhccCCCcceE
Confidence 3444566788999999999999999999999999999 99998865 95 599999 99999999999999999999
Q ss_pred ecccccCccccchhhHHHHhhhccCcccccc
Q psy8969 1197 CAHEFCSKSFKTSGDLQKHVRTHTDEFQMSG 1227 (1230)
Q Consensus 1197 C~~e~CGKsF~~ks~LkrH~R~HtGE~~~s~ 1227 (1230)
| ++||+.|.++.+|.+|+++|+....+..
T Consensus 83 C--~~C~k~f~~~~~L~~H~~~hh~~~~~~~ 111 (115)
T 2dmi_A 83 C--MYCGHSFESLQDLSVHMIKTKHYQKVSG 111 (115)
T ss_dssp C--SSSCCBCSSHHHHHHHHHHTTTTTCSCC
T ss_pred C--CCCCCccCCHHHHHHHHHHhCCcccCCC
Confidence 9 4799999999999999999987766543
No 63
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=99.72 E-value=2e-18 Score=165.42 Aligned_cols=95 Identities=22% Similarity=0.360 Sum_probs=87.1
Q ss_pred CcccccCCCCCccCCCCCCCCCCchhhhccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeecccccCcc
Q psy8969 1126 GTVKKSTSSENNVCPECKKTFSSAHHMKVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKS 1205 (1230)
Q Consensus 1126 ~~~~~~t~~kpy~C~~CgK~F~s~s~Lk~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~~e~CGKs 1205 (1230)
...+.|+++++|.|+.|++.|.+.+.|..|+++| ++||+|+ .|++.|.+...|++|++ |++++||.|. +|++.
T Consensus 6 s~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H--~~~~~C~--~C~~~f~~~~~l~~H~~-H~~~~~~~C~--~C~~~ 78 (107)
T 1wjp_A 6 SGASPVENKEVYQCRLCNAKLSSLLEQGSHERLC--RNAAVCP--YCSLRFFSPELKQEHES-KCEYKKLTCL--ECMRT 78 (107)
T ss_dssp CCCCCCCCCCCCBCTTTCCBCSSHHHHHHHHHHH--HHSBCCT--TTCCCBSSHHHHHHHHH-HCSTGGGEEG--GGTEE
T ss_pred ccCcccCCCcCeECCCCCCccCCHHHHHHHHHHC--CCCccCC--CCCCccCCHHHHHHHHH-cCCCCCccCc--cccch
Confidence 3455778999999999999999999999999999 4899995 59999999999999996 9999999994 79999
Q ss_pred ccchhhHHHHhh-hccCcccccc
Q psy8969 1206 FKTSGDLQKHVR-THTDEFQMSG 1227 (1230)
Q Consensus 1206 F~~ks~LkrH~R-~HtGE~~~s~ 1227 (1230)
|.++.+|.+|++ +|+++..+.+
T Consensus 79 f~~~~~L~~H~~~~H~~~~~~~~ 101 (107)
T 1wjp_A 79 FKSSFSIWRHQVEVHNQNNMAPT 101 (107)
T ss_dssp CSSHHHHHHHHHHTSCCCCCCCC
T ss_pred hCCHHHHHHHHHHHcCCCCCCCC
Confidence 999999999997 9999988764
No 64
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}
Probab=99.72 E-value=2.5e-18 Score=161.90 Aligned_cols=88 Identities=36% Similarity=0.795 Sum_probs=82.4
Q ss_pred CCCCCccCCC--CCCCCCCchhhhccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeecccccCccccch
Q psy8969 1132 TSSENNVCPE--CKKTFSSAHHMKVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTS 1209 (1230)
Q Consensus 1132 t~~kpy~C~~--CgK~F~s~s~Lk~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~~e~CGKsF~~k 1209 (1230)
...++|.|.. |++.|.+.+.|..|+++|++++||.|+++.|++.|.+...|.+|+++|++++||.|. +|++.|.+.
T Consensus 11 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~ 88 (100)
T 2ebt_A 11 EKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCG--VCNRSFSRS 88 (100)
T ss_dssp CSCCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCS--SSCCBCSSH
T ss_pred ccCcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECC--CCcCccCCH
Confidence 4567899996 999999999999999999999999996446999999999999999999999999994 799999999
Q ss_pred hhHHHHhhhccC
Q psy8969 1210 GDLQKHVRTHTD 1221 (1230)
Q Consensus 1210 s~LkrH~R~HtG 1221 (1230)
.+|.+|+++|++
T Consensus 89 ~~l~~H~~~H~~ 100 (100)
T 2ebt_A 89 DHLALHMKRHQN 100 (100)
T ss_dssp HHHHHHHHHHCC
T ss_pred HHHHHHHHHhCC
Confidence 999999999985
No 65
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=99.72 E-value=2.2e-18 Score=160.96 Aligned_cols=88 Identities=34% Similarity=0.721 Sum_probs=82.5
Q ss_pred CCCCCccCCCCCCCCCCchhhhccccccCCCCcccCCcccccccccCchhhhhhcccccCC--CCEeecccccCccccch
Q psy8969 1132 TSSENNVCPECKKTFSSAHHMKVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGE--KPYRCAHEFCSKSFKTS 1209 (1230)
Q Consensus 1132 t~~kpy~C~~CgK~F~s~s~Lk~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGE--KPy~C~~e~CGKsF~~k 1209 (1230)
+++++|.|+.|++.|.+...|.+|+++|++++||+|+ .|++.|.+...|.+|+++|+++ +||.|. +|++.|.++
T Consensus 3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~--~C~~~f~~~ 78 (95)
T 2yt9_A 3 SGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCP--VCGLRFKRKDRMSYHVRSHDGSVGKPYICQ--SCGKGFSRP 78 (95)
T ss_dssp CCCSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECS--SSCCEESCHHHHHHHHHHHCCCCCSSBCCS--SSCCCBSSH
T ss_pred CCCCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCC--CCCCccCCHHHHHHHHHHhcCCCCCceECC--CccchhCCH
Confidence 5678999999999999999999999999999999996 5999999999999999999998 999994 799999999
Q ss_pred hhHHHHhh-hccCcc
Q psy8969 1210 GDLQKHVR-THTDEF 1223 (1230)
Q Consensus 1210 s~LkrH~R-~HtGE~ 1223 (1230)
..|.+|++ .|+|+.
T Consensus 79 ~~L~~H~~~~H~~~~ 93 (95)
T 2yt9_A 79 DHLNGHIKQVHSGPS 93 (95)
T ss_dssp HHHHHHHHHTSCCCS
T ss_pred HHHHHHHHHhcCCCC
Confidence 99999996 788764
No 66
>3pfi_A Holliday junction ATP-dependent DNA helicase RUVB; probable holliday junction DNA helicase; HET: ADP; 2.69A {Campylobacter jejuni subsp}
Probab=99.71 E-value=1.5e-16 Score=183.61 Aligned_cols=219 Identities=20% Similarity=0.287 Sum_probs=153.7
Q ss_pred ccccChHHHHHHHHHHHHHhhhcCCCCCceEEEeCCCCCCchHHHHHHHHHhCCCeEEEecCCcchhHHHhhcccccccc
Q psy8969 354 DDHYGMEDVKKRILEFIAVSQLKGTTQGKILCFYGPPGVGKTSIAKSIARALNREYFRFSVGGMSDVAEIKGHRRTYVGA 433 (1230)
Q Consensus 354 ~d~~G~~~vK~~i~e~l~~~~~~~~~~~~~llL~GPPG~GKTslak~iA~~l~~~~~~~~~~~~~d~~~i~g~~~~~~g~ 433 (1230)
++++|++.+++.+.+++......+ .....+||+||||||||++|++||+.++.+|+.++...+..
T Consensus 29 ~~iiG~~~~~~~l~~~l~~~~~~~-~~~~~vll~G~~GtGKT~la~~ia~~~~~~~~~~~~~~~~~-------------- 93 (338)
T 3pfi_A 29 DGYIGQESIKKNLNVFIAAAKKRN-ECLDHILFSGPAGLGKTTLANIISYEMSANIKTTAAPMIEK-------------- 93 (338)
T ss_dssp GGCCSCHHHHHHHHHHHHHHHHTT-SCCCCEEEECSTTSSHHHHHHHHHHHTTCCEEEEEGGGCCS--------------
T ss_pred HHhCChHHHHHHHHHHHHHHHhcC-CCCCeEEEECcCCCCHHHHHHHHHHHhCCCeEEecchhccc--------------
Confidence 579999999999999986543332 34567899999999999999999999999999988654432
Q ss_pred CchhHHHHHHhhcCCCCEEEEecccccCCCCCCChhhHHHhhcChhhhhhhhhh---ccCccccCCceEEEEecCCCCCC
Q psy8969 434 MPGKVIQCMKKTKTENPLVLIDEVDKIGKGYSGDPASALLEMLDPEQNANFLDH---YLDVPVDLSRVLFICTANVIDTI 510 (1230)
Q Consensus 434 ~~g~i~~~~~~~~~~~pvillDEIDk~~~~~~~~~~~all~~ld~~q~~~f~d~---~~~~~~d~s~v~~I~TaN~~~~I 510 (1230)
.+.+...+.. .....+|||||||.+.. +....|+.+|+.......... ...+.+++.+++||+|||....+
T Consensus 94 -~~~~~~~~~~-~~~~~vl~lDEi~~l~~----~~~~~Ll~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~atn~~~~l 167 (338)
T 3pfi_A 94 -SGDLAAILTN-LSEGDILFIDEIHRLSP----AIEEVLYPAMEDYRLDIIIGSGPAAQTIKIDLPKFTLIGATTRAGML 167 (338)
T ss_dssp -HHHHHHHHHT-CCTTCEEEEETGGGCCH----HHHHHHHHHHHTSCC---------CCCCCCCCCCCEEEEEESCGGGS
T ss_pred -hhHHHHHHHh-ccCCCEEEEechhhcCH----HHHHHHHHHHHhccchhhcccCccccceecCCCCeEEEEeCCCcccc
Confidence 2233333332 23457999999999852 345677777654221100000 01234566689999999999999
Q ss_pred CHhhhccc-ceeecCCCCHHHHHHHHHHhhcchhHHhcCCCCCCcccCHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHH
Q psy8969 511 PEPLRDRM-EMIDVSGYVAEEKVAIAAQYLIPQAMKESGLSPEQITLEPSAIQVLIKNYCRESGVRNLQKHIEKVTRKVA 589 (1230)
Q Consensus 511 ~~~L~~R~-~~i~~~~~~~~e~~~i~~~~l~~~~~~~~gl~~~~i~~~~~~~~~li~~~~~e~gvR~l~~~i~~i~r~~~ 589 (1230)
+++|++|| .++.+..|+.++...++.+++ ... .+.++++++..+++ . ..+.+|.+.+.++.+...+.
T Consensus 168 ~~~L~~R~~~~i~l~~~~~~e~~~il~~~~-----~~~-----~~~~~~~~~~~l~~-~-~~G~~r~l~~~l~~~~~~a~ 235 (338)
T 3pfi_A 168 SNPLRDRFGMQFRLEFYKDSELALILQKAA-----LKL-----NKTCEEKAALEIAK-R-SRSTPRIALRLLKRVRDFAD 235 (338)
T ss_dssp CHHHHTTCSEEEECCCCCHHHHHHHHHHHH-----HHT-----TCEECHHHHHHHHH-T-TTTCHHHHHHHHHHHHHHHH
T ss_pred CHHHHhhcCEEeeCCCcCHHHHHHHHHHHH-----Hhc-----CCCCCHHHHHHHHH-H-HCcCHHHHHHHHHHHHHHHH
Confidence 99999999 689999999999988887654 222 35688999999887 3 36678988888777554332
Q ss_pred HHHhhcCCCceEechhhhhhhc
Q psy8969 590 LTIVKKESDKVTVTNDNLSDFV 611 (1230)
Q Consensus 590 ~~~~~~~~~~~~i~~~~~~~~~ 611 (1230)
. . ..-.|+.+.+...+
T Consensus 236 ~---~---~~~~i~~~~~~~~~ 251 (338)
T 3pfi_A 236 V---N---DEEIITEKRANEAL 251 (338)
T ss_dssp H---T---TCSEECHHHHHHHH
T ss_pred h---h---cCCccCHHHHHHHH
Confidence 1 1 11246777766554
No 67
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=99.71 E-value=2.1e-18 Score=165.85 Aligned_cols=89 Identities=33% Similarity=0.735 Sum_probs=83.9
Q ss_pred ccCCCCCccCCCCCCCCCCchhhhccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeecccccCccccch
Q psy8969 1130 KSTSSENNVCPECKKTFSSAHHMKVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTS 1209 (1230)
Q Consensus 1130 ~~t~~kpy~C~~CgK~F~s~s~Lk~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~~e~CGKsF~~k 1209 (1230)
.|+++++|.| .|++.|.+.+.|.+|+++|++++||+|+ .|++.|.+...|.+|+++|++++||.|. +|++.|.++
T Consensus 4 ~h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~ 78 (110)
T 2csh_A 4 GSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCG--VCGKKFKMKHHLVGHMKIHTGIKPYECN--ICAKRFMWR 78 (110)
T ss_dssp CCCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECT--TTSCEESSSHHHHHHHTTTCCCCCEECS--SSCCEESCH
T ss_pred CCCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCC--CCCcccCCHHHHHHHHHHcCCCCCeeCC--CCcchhcCH
Confidence 4678899999 9999999999999999999999999996 5999999999999999999999999994 799999999
Q ss_pred hhHHHHhhhccCcc
Q psy8969 1210 GDLQKHVRTHTDEF 1223 (1230)
Q Consensus 1210 s~LkrH~R~HtGE~ 1223 (1230)
.+|.+|+++|++..
T Consensus 79 ~~l~~H~~~~~~~~ 92 (110)
T 2csh_A 79 DSFHRHVTSCTKSY 92 (110)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHccccc
Confidence 99999999998654
No 68
>3hu3_A Transitional endoplasmic reticulum ATPase; VCP, transport protein; HET: AGS; 2.20A {Homo sapiens} PDB: 3hu2_A* 3hu1_A* 1e32_A* 1s3s_A*
Probab=99.71 E-value=8.8e-18 Score=203.17 Aligned_cols=165 Identities=23% Similarity=0.361 Sum_probs=130.5
Q ss_pred cccccChHHHHHHHHHHHHHhhh-------cCCCCCceEEEeCCCCCCchHHHHHHHHHhCCCeEEEecCCcchhHHHhh
Q psy8969 353 DDDHYGMEDVKKRILEFIAVSQL-------KGTTQGKILCFYGPPGVGKTSIAKSIARALNREYFRFSVGGMSDVAEIKG 425 (1230)
Q Consensus 353 ~~d~~G~~~vK~~i~e~l~~~~~-------~~~~~~~~llL~GPPG~GKTslak~iA~~l~~~~~~~~~~~~~d~~~i~g 425 (1230)
.++++|++.+++.|.+++..... .+...+..+||+||||||||++|++||..++.+|+.++++.+.+
T Consensus 203 ~~~i~G~~~~~~~l~~~i~~~l~~~~~~~~~g~~~~~~vLL~GppGtGKT~lAraia~~~~~~fv~vn~~~l~~------ 276 (489)
T 3hu3_A 203 YDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMS------ 276 (489)
T ss_dssp GGGCCSCHHHHHHHHHHTHHHHHCHHHHHHHTCCCCCEEEEECSTTSSHHHHHHHHHHHCSSEEEEEEHHHHHT------
T ss_pred HHHcCCHHHHHHHHHHHHHHHhhCHHHHHhcCCCCCCcEEEECcCCCCHHHHHHHHHHHhCCCEEEEEchHhhh------
Confidence 36899999999999998865321 23566788999999999999999999999999999998754443
Q ss_pred ccccccccCchhHHHHHHhhcCCCC-EEEEecccccCCCCCCC-------hhhHHHhhcChhhhhhhhhhccCccccCCc
Q psy8969 426 HRRTYVGAMPGKVIQCMKKTKTENP-LVLIDEVDKIGKGYSGD-------PASALLEMLDPEQNANFLDHYLDVPVDLSR 497 (1230)
Q Consensus 426 ~~~~~~g~~~g~i~~~~~~~~~~~p-villDEIDk~~~~~~~~-------~~~all~~ld~~q~~~f~d~~~~~~~d~s~ 497 (1230)
.|+|...+.+...|..+....| ||||||||.+...+... ..+.||.+||.. ....+
T Consensus 277 ---~~~g~~~~~~~~~f~~A~~~~p~iLfLDEId~l~~~~~~~~~~~~~~~~~~LL~~ld~~-------------~~~~~ 340 (489)
T 3hu3_A 277 ---KLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGL-------------KQRAH 340 (489)
T ss_dssp ---SCTTHHHHHHHHHHHHHHHTCSEEEEEESHHHHCBCTTSCCCHHHHHHHHHHHHHHHHS-------------CTTSC
T ss_pred ---hhcchhHHHHHHHHHHHHhcCCcEEEecchhhhccccccccchHHHHHHHHHHHHhhcc-------------ccCCc
Confidence 5778888888899988877665 88999999998654322 123455554421 12357
Q ss_pred eEEEEecCCCCCCCHhhhc--ccc-eeecCCCCHHHHHHHHHHhh
Q psy8969 498 VLFICTANVIDTIPEPLRD--RME-MIDVSGYVAEEKVAIAAQYL 539 (1230)
Q Consensus 498 v~~I~TaN~~~~I~~~L~~--R~~-~i~~~~~~~~e~~~i~~~~l 539 (1230)
|+||+|||.++.|+++|++ ||. +|.+..|+.++...|++.++
T Consensus 341 v~vIaaTn~~~~Ld~al~r~gRf~~~i~i~~P~~~eR~~IL~~~~ 385 (489)
T 3hu3_A 341 VIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHT 385 (489)
T ss_dssp EEEEEEESCGGGBCGGGGSTTSSCEEEECCCCCHHHHHHHHHHHT
T ss_pred eEEEEecCCccccCHHHhCCCcCceEEEeCCCCHHHHHHHHHHHH
Confidence 9999999999999999999 886 58999999999999987764
No 69
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A
Probab=99.70 E-value=5.1e-18 Score=156.25 Aligned_cols=85 Identities=34% Similarity=0.781 Sum_probs=79.9
Q ss_pred CCCccCCC--CCCCCCCchhhhccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeecccccCccccchhh
Q psy8969 1134 SENNVCPE--CKKTFSSAHHMKVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGD 1211 (1230)
Q Consensus 1134 ~kpy~C~~--CgK~F~s~s~Lk~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~~e~CGKsF~~ks~ 1211 (1230)
.++|.|+. |++.|.+.+.|.+|+++|++++||.|++..|++.|.+...|.+|+++|++++||.|+ .||+.|.+..+
T Consensus 3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~ 80 (89)
T 2wbs_A 3 TATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQ--KCDRAFSRSDH 80 (89)
T ss_dssp CCCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECS--SSSCEESSHHH
T ss_pred CCCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCC--CCCcccCCHHH
Confidence 46799999 999999999999999999999999996335999999999999999999999999994 79999999999
Q ss_pred HHHHhhhcc
Q psy8969 1212 LQKHVRTHT 1220 (1230)
Q Consensus 1212 LkrH~R~Ht 1220 (1230)
|.+|+++|+
T Consensus 81 l~~H~~~H~ 89 (89)
T 2wbs_A 81 LALHMKRHF 89 (89)
T ss_dssp HHHHGGGGC
T ss_pred HHHHHHhhC
Confidence 999999994
No 70
>2dhr_A FTSH; AAA+ protein, hexameric Zn metalloprotease, hydrolase; HET: ADP; 3.90A {Thermus thermophilus}
Probab=99.70 E-value=4e-17 Score=197.13 Aligned_cols=223 Identities=20% Similarity=0.285 Sum_probs=146.8
Q ss_pred hhhcccccChHHHHHHHHHHHHHhhhc------CCCCCceEEEeCCCCCCchHHHHHHHHHhCCCeEEEecCCcchhHHH
Q psy8969 350 KILDDDHYGMEDVKKRILEFIAVSQLK------GTTQGKILCFYGPPGVGKTSIAKSIARALNREYFRFSVGGMSDVAEI 423 (1230)
Q Consensus 350 ~~l~~d~~G~~~vK~~i~e~l~~~~~~------~~~~~~~llL~GPPG~GKTslak~iA~~l~~~~~~~~~~~~~d~~~i 423 (1230)
.+--+|++|++++|+.+.+.+...... +...+++++|+||||||||+||++||..++.+|+.++...+.+
T Consensus 27 ~~~f~dv~G~~~~k~~l~~lv~~l~~~~~~~~lg~~ip~GvLL~GppGtGKTtLaraIa~~~~~~~i~i~g~~~~~---- 102 (499)
T 2dhr_A 27 KVTFKDVAGAEEAKEELKEIVEFLKNPSRFHEMGARIPKGVLLVGPPGVGKTHLARAVAGEARVPFITASGSDFVE---- 102 (499)
T ss_dssp CCCTTSSCSCHHHHHHHHHHHHHHHCGGGTTTTSCCCCSEEEEECSSSSSHHHHHHHHHHHTTCCEEEEEGGGGTS----
T ss_pred CCCHHHcCCcHHHHHHHHHHHHHhhchhhhhhccCCCCceEEEECCCCCCHHHHHHHHHHHhCCCEEEEehhHHHH----
Confidence 444578999999999998876542211 2234567999999999999999999999999999998765443
Q ss_pred hhccccccccCchhHHHHHHhhcCCC-CEEEEecccccCCCCCC-----Ch-----hhHHHhhcChhhhhhhhhhccCcc
Q psy8969 424 KGHRRTYVGAMPGKVIQCMKKTKTEN-PLVLIDEVDKIGKGYSG-----DP-----ASALLEMLDPEQNANFLDHYLDVP 492 (1230)
Q Consensus 424 ~g~~~~~~g~~~g~i~~~~~~~~~~~-pvillDEIDk~~~~~~~-----~~-----~~all~~ld~~q~~~f~d~~~~~~ 492 (1230)
.|+|.....+...|..+.... .|+||||||.++..+.. .. .+.||..||. .
T Consensus 103 -----~~~g~~~~~v~~lfq~a~~~~p~il~IDEId~l~~~r~~~~~~~~~e~~~~l~~LL~~Ldg------------~- 164 (499)
T 2dhr_A 103 -----MFVGVGAARVRDLFETAKRHAPCIVFIDEIDAVGRKRGSGVGGGNDEREQTLNQLLVEMDG------------F- 164 (499)
T ss_dssp -----SCTTHHHHHHHHHTTTSSSSSSCEEEEECGGGTCCCSSSSTTTSSHHHHHHHHHHHHHGGG------------C-
T ss_pred -----hhhhhHHHHHHHHHHHHHhcCCCEEEEehHHHHHHhhccCcCCCcHHHHHHHHHHHHHhcc------------c-
Confidence 356666667777887776544 58999999999754321 11 1222222221 1
Q ss_pred ccCCceEEEEecCCCCCCCHhhhc--ccc-eeecCCCCHHHHHHHHHHhhcchhHHhcCCCCCCcccCHHHHHHHHHHhh
Q psy8969 493 VDLSRVLFICTANVIDTIPEPLRD--RME-MIDVSGYVAEEKVAIAAQYLIPQAMKESGLSPEQITLEPSAIQVLIKNYC 569 (1230)
Q Consensus 493 ~d~s~v~~I~TaN~~~~I~~~L~~--R~~-~i~~~~~~~~e~~~i~~~~l~~~~~~~~gl~~~~i~~~~~~~~~li~~~~ 569 (1230)
-....+++|+|||.++.||++|++ ||+ .|.+..|+.++...|++.++- . +.+++++....+...|
T Consensus 165 ~~~~~viviAatn~p~~LD~aLlr~gRfdr~i~i~~Pd~~~R~~IL~~~~~-----~-------~~l~~dv~l~~lA~~t 232 (499)
T 2dhr_A 165 EKDTAIVVMAATNRPDILDPALLRPGRFDRQIAIDAPDVKGREQILRIHAR-----G-------KPLAEDVDLALLAKRT 232 (499)
T ss_dssp CSSCCCEEEECCSCGGGSCTTTSSTTSSCCEEECCCCCHHHHHHHHHHTTS-----S-------SCCCCSSTTHHHHTTS
T ss_pred ccCccEEEEEecCChhhcCcccccccccceEEecCCCCHHHHHHHHHHHHh-----c-------CCCChHHHHHHHHHhc
Confidence 123468999999999999999998 776 678899999999998876541 1 1222222223344444
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHhhcCCCceEechhhhhhhcC
Q psy8969 570 RESGVRNLQKHIEKVTRKVALTIVKKESDKVTVTNDNLSDFVG 612 (1230)
Q Consensus 570 ~e~gvR~l~~~i~~i~r~~~~~~~~~~~~~~~i~~~~~~~~~~ 612 (1230)
.+.--|.|+..+..++ ....... ...|+.+++.+.+.
T Consensus 233 ~G~~gadL~~lv~~Aa----~~A~~~~--~~~It~~dl~~al~ 269 (499)
T 2dhr_A 233 PGFVGADLENLLNEAA----LLAAREG--RRKITMKDLEEAAD 269 (499)
T ss_dssp CSCCHHHHHHHHHHHH----HHHTTTC--CSSCCSHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHH----HHHHHhC--CCccCHHHHHHHHH
Confidence 4433366665555433 2222111 22477777776654
No 71
>2r62_A Cell division protease FTSH homolog; ATPase domain, ATP-binding, cell CELL division, hydrolase, membrane, metal-binding; 3.30A {Helicobacter pylori} PDB: 2r65_A*
Probab=99.69 E-value=1.6e-17 Score=185.39 Aligned_cols=176 Identities=21% Similarity=0.329 Sum_probs=118.1
Q ss_pred ccccChHHHHHHHHHHHHHhhh------cCCCCCceEEEeCCCCCCchHHHHHHHHHhCCCeEEEecCCcchhHHHhhcc
Q psy8969 354 DDHYGMEDVKKRILEFIAVSQL------KGTTQGKILCFYGPPGVGKTSIAKSIARALNREYFRFSVGGMSDVAEIKGHR 427 (1230)
Q Consensus 354 ~d~~G~~~vK~~i~e~l~~~~~------~~~~~~~~llL~GPPG~GKTslak~iA~~l~~~~~~~~~~~~~d~~~i~g~~ 427 (1230)
++++|++.+++.+.+.+..... .+...+.++||+||||||||++|++||+.++.+|+.++.+.+.+
T Consensus 11 ~~i~G~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~vll~G~~GtGKT~la~~la~~~~~~~~~v~~~~~~~-------- 82 (268)
T 2r62_A 11 KDMAGNEEAKEEVVEIVDFLKYPERYANLGAKIPKGVLLVGPPGTGKTLLAKAVAGEAHVPFFSMGGSSFIE-------- 82 (268)
T ss_dssp TTSSSCTTTHHHHHHHHHHHHCHHHHHHHSCCCCSCCCCBCSSCSSHHHHHHHHHHHHTCCCCCCCSCTTTT--------
T ss_pred HHhCCcHHHHHHHHHHHHHHHChHHHHHCCCCCCceEEEECCCCCcHHHHHHHHHHHhCCCEEEechHHHHH--------
Confidence 6799999999999887753211 13445667999999999999999999999999999988766544
Q ss_pred ccccccCchhHHHHHHhhcCC-CCEEEEecccccCCCCCCChhhHHHhhcChhhhhhhhhhccCccccCCceEEEEecCC
Q psy8969 428 RTYVGAMPGKVIQCMKKTKTE-NPLVLIDEVDKIGKGYSGDPASALLEMLDPEQNANFLDHYLDVPVDLSRVLFICTANV 506 (1230)
Q Consensus 428 ~~~~g~~~g~i~~~~~~~~~~-~pvillDEIDk~~~~~~~~~~~all~~ld~~q~~~f~d~~~~~~~d~s~v~~I~TaN~ 506 (1230)
.|.|.....+...|..+... ..||||||||.+.....+......... .......++..+.+......++++|+|||.
T Consensus 83 -~~~~~~~~~~~~~~~~a~~~~~~vl~iDEid~l~~~~~~~~~~~~~~~-~~~~~~~ll~~l~~~~~~~~~v~vi~ttn~ 160 (268)
T 2r62_A 83 -MFVGLGASRVRDLFETAKKQAPSIIFIDEIDAIGKSRAAGGVVSGNDE-REQTLNQLLAEMDGFGSENAPVIVLAATNR 160 (268)
T ss_dssp -SCSSSCSSSSSTTHHHHHHSCSCEEEESCGGGTTC----------CCC-SCSSTTTTTTTTTCSSCSCSCCEEEECBSC
T ss_pred -hhcchHHHHHHHHHHHHHhcCCeEEEEeChhhhcccccccccCCCchh-HHHHHHHHHHHhhCcccCCCCEEEEEecCC
Confidence 35555554455555555443 459999999999754321110000000 000011122221122223456999999999
Q ss_pred CCCCCHhhhc--ccc-eeecCCCCHHHHHHHHHHhh
Q psy8969 507 IDTIPEPLRD--RME-MIDVSGYVAEEKVAIAAQYL 539 (1230)
Q Consensus 507 ~~~I~~~L~~--R~~-~i~~~~~~~~e~~~i~~~~l 539 (1230)
++.|++++++ ||. .|.+..|+.++...|++.++
T Consensus 161 ~~~ld~~l~r~~Rf~~~i~i~~p~~~~r~~il~~~~ 196 (268)
T 2r62_A 161 PEILDPALMRPGRFDRQVLVDKPDFNGRVEILKVHI 196 (268)
T ss_dssp CTTSCGGGGSSSSSCCCCBCCCCCTTTHHHHHHHHT
T ss_pred chhcCHhHcCCCCCCeEEEecCcCHHHHHHHHHHHH
Confidence 9999999999 885 57889999999999987665
No 72
>3uk6_A RUVB-like 2; hexameric AAA+ ATP-ASE, DNA unwinding, hydrolase; HET: ADP; 2.95A {Homo sapiens} PDB: 2xsz_D*
Probab=99.69 E-value=2.4e-16 Score=183.80 Aligned_cols=222 Identities=19% Similarity=0.271 Sum_probs=144.0
Q ss_pred ccccChHHHHHHHHHHHHHhhhcCCCCCceEEEeCCCCCCchHHHHHHHHHhCC--CeEEEecCCcch-----hHHHh--
Q psy8969 354 DDHYGMEDVKKRILEFIAVSQLKGTTQGKILCFYGPPGVGKTSIAKSIARALNR--EYFRFSVGGMSD-----VAEIK-- 424 (1230)
Q Consensus 354 ~d~~G~~~vK~~i~e~l~~~~~~~~~~~~~llL~GPPG~GKTslak~iA~~l~~--~~~~~~~~~~~d-----~~~i~-- 424 (1230)
++++|++.+++.+...+... ..+...+..+||+||||||||++|++||+.++. +|+.++...+.. ...+.
T Consensus 44 ~~ivG~~~~~~~l~~l~~~~-~~~~~~~~~vLl~GppGtGKT~la~~la~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (368)
T 3uk6_A 44 QGMVGQLAARRAAGVVLEMI-REGKIAGRAVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALTQA 122 (368)
T ss_dssp TTEESCHHHHHHHHHHHHHH-HTTCCTTCEEEEEESTTSSHHHHHHHHHHHHCSSCCEEEEEGGGGSCSSSCHHHHHHHH
T ss_pred hhccChHHHHHHHHHHHHHH-HcCCCCCCEEEEECCCCCCHHHHHHHHHHHhcccCCcccccchhhhhcccchhHHHHHH
Confidence 57999999999866554322 234444678999999999999999999999985 787777443111 00000
Q ss_pred ---------------------------------hccccccccCchhHHHHHHhhcC----------CCCEEEEecccccC
Q psy8969 425 ---------------------------------GHRRTYVGAMPGKVIQCMKKTKT----------ENPLVLIDEVDKIG 461 (1230)
Q Consensus 425 ---------------------------------g~~~~~~g~~~g~i~~~~~~~~~----------~~pvillDEIDk~~ 461 (1230)
+....+.|.....+...+..+.. .++||||||||.+.
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~vl~IDEi~~l~ 202 (368)
T 3uk6_A 123 FRRSIGVRIKAGAVHTVSLHEIDVINSRTQGFLALFSGDTGEIKSEVREQINAKVAEWREEGKAEIIPGVLFIDEVHMLD 202 (368)
T ss_dssp HHHSBEECC------CEEHHHHHHHTC----CCSCC-------CHHHHHHHHHHHHHHHHHTC---CBCEEEEESGGGSB
T ss_pred HHHHHHHHhhhhccccccHhhhhhhhcccccchhhccCcccccHHHHHHHHHHHHHHhhhhccccccCceEEEhhccccC
Confidence 00011223333444444433221 13699999999984
Q ss_pred CCCCCChhhHHHhhcChhhhhhhhhhccCccccCCceEEEEec-----------CCCCCCCHhhhcccceeecCCCCHHH
Q psy8969 462 KGYSGDPASALLEMLDPEQNANFLDHYLDVPVDLSRVLFICTA-----------NVIDTIPEPLRDRMEMIDVSGYVAEE 530 (1230)
Q Consensus 462 ~~~~~~~~~all~~ld~~q~~~f~d~~~~~~~d~s~v~~I~Ta-----------N~~~~I~~~L~~R~~~i~~~~~~~~e 530 (1230)
. +..++|+.+++.. ...+++|+|. |.+..++++|++||.+|.+++|+.++
T Consensus 203 ~----~~~~~L~~~le~~---------------~~~~~ii~t~~~~~~i~~t~~~~~~~l~~~l~sR~~~i~~~~~~~~e 263 (368)
T 3uk6_A 203 I----ESFSFLNRALESD---------------MAPVLIMATNRGITRIRGTSYQSPHGIPIDLLDRLLIVSTTPYSEKD 263 (368)
T ss_dssp H----HHHHHHHHHTTCT---------------TCCEEEEEESCSEEECBTSSCEEETTCCHHHHTTEEEEEECCCCHHH
T ss_pred h----HHHHHHHHHhhCc---------------CCCeeeeecccceeeeeccCCCCcccCCHHHHhhccEEEecCCCHHH
Confidence 3 3455666666431 1234444443 46788999999999999999999999
Q ss_pred HHHHHHHhhcchhHHhcCCCCCCcccCHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCceEechhhhhhh
Q psy8969 531 KVAIAAQYLIPQAMKESGLSPEQITLEPSAIQVLIKNYCRESGVRNLQKHIEKVTRKVALTIVKKESDKVTVTNDNLSDF 610 (1230)
Q Consensus 531 ~~~i~~~~l~~~~~~~~gl~~~~i~~~~~~~~~li~~~~~e~gvR~l~~~i~~i~r~~~~~~~~~~~~~~~i~~~~~~~~ 610 (1230)
...|+...+- . ..+.++++++..+++ ++..+++|.+...+..++..+.. . ..-.|+.+++.+.
T Consensus 264 ~~~il~~~~~-----~-----~~~~~~~~~l~~l~~-~~~~G~~r~~~~ll~~a~~~A~~----~--~~~~It~~~v~~a 326 (368)
T 3uk6_A 264 TKQILRIRCE-----E-----EDVEMSEDAYTVLTR-IGLETSLRYAIQLITAASLVCRK----R--KGTEVQVDDIKRV 326 (368)
T ss_dssp HHHHHHHHHH-----H-----TTCCBCHHHHHHHHH-HHHHSCHHHHHHHHHHHHHHHHH----T--TCSSBCHHHHHHH
T ss_pred HHHHHHHHHH-----H-----cCCCCCHHHHHHHHH-HhcCCCHHHHHHHHHHHHHHHHH----h--CCCCCCHHHHHHH
Confidence 9999887652 2 245688999888774 45557889988888776654322 1 1235777777766
Q ss_pred cC
Q psy8969 611 VG 612 (1230)
Q Consensus 611 ~~ 612 (1230)
++
T Consensus 327 ~~ 328 (368)
T 3uk6_A 327 YS 328 (368)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 73
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.69 E-value=1.6e-17 Score=161.05 Aligned_cols=101 Identities=20% Similarity=0.300 Sum_probs=93.3
Q ss_pred ChhHHHhhhhcccCCCceecCCCccCccccChhhHHHHHhh--ccCCCCcc-cccccccccc--CCchhHhhhhccccCC
Q psy8969 805 TSNIRKVHIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRI--HSGEKPYV-CQVRDCQKRF--TEYSSLYKHTLVHSDI 879 (1230)
Q Consensus 805 ~~~~L~~H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~--Htgekpy~-C~~~~C~k~F--~~~~~L~~H~~~H~~e 879 (1230)
....|..|+++|++++||.|.. |++.|.+.+.|..|++. |.++++|. |.. |++.| .+...|..|+++|+++
T Consensus 3 s~~~l~~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~--C~~~f~f~~~~~l~~H~~~H~~~ 78 (115)
T 2dmi_A 3 SGSSGKLYGSIFTGASKFRCKD--CSAAYDTLVELTVHMNETGHYRDDNHETDNN--NPKRWSKPRKRSLLEMEGKEDAQ 78 (115)
T ss_dssp CCCCCCCCCCCCCCCCSEEBSS--SSCEESSHHHHHHHHHHTCCCBCSCCCCCCC--CCSCCSSCCCCCCCCCCCSCCCC
T ss_pred cchhhhhheeeeCCCCCEECCc--cCchhcCHHHHHHHHHHhCccccCCCccCCC--CCcccccccHHHHHHHhhccCCC
Confidence 3567889999999999999999 99999999999999999 88888765 975 99999 9999999999999999
Q ss_pred CCccCCCCCcccCChhhHHhHHhhhcCCCC
Q psy8969 880 RPFICDRCPRSYRQLCTLNVHKKTNHRESK 909 (1230)
Q Consensus 880 kpy~C~~Cgk~F~~~~~L~~H~k~hh~~~~ 909 (1230)
+||.|+.|++.|.+...|..|++.||....
T Consensus 79 ~~~~C~~C~k~f~~~~~L~~H~~~hh~~~~ 108 (115)
T 2dmi_A 79 KVLKCMYCGHSFESLQDLSVHMIKTKHYQK 108 (115)
T ss_dssp SSCBCSSSCCBCSSHHHHHHHHHHTTTTTC
T ss_pred cceECCCCCCccCCHHHHHHHHHHhCCccc
Confidence 999999999999999999999999987643
No 74
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=99.68 E-value=5.1e-18 Score=145.86 Aligned_cols=58 Identities=28% Similarity=0.720 Sum_probs=44.1
Q ss_pred CCcccCCcccccccccCchhhhhhcccccCCCCEeecccccCccccchhhHHHHhhhccCcc
Q psy8969 1162 IRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTDEF 1223 (1230)
Q Consensus 1162 EKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~~e~CGKsF~~ks~LkrH~R~HtGE~ 1223 (1230)
||||+|+ +|||+|.+++.|++|+++|+|++||.|. +|||+|.++++|.+|+|+|+||.
T Consensus 2 EKpy~C~--~C~k~F~~~~~L~~H~~~Ht~ekp~~C~--~C~k~F~~~~~L~~H~~~Htgep 59 (60)
T 4gzn_C 2 ERPFFCN--FCGKTYRDASGLSRHRRAHLGYRPRSCP--ECGKCFRDQSEVNRHLKVHQNKP 59 (60)
T ss_dssp CCCEECT--TTCCEESSHHHHHHHHHHHHTCCCEECT--TTCCEESSHHHHHHHGGGGSCC-
T ss_pred CCCccCC--CCCCEeCCHHHHHHHHHHhCCCcCeECC--CCCCCcCCHHHHHHHhCccCCCC
Confidence 6777774 5888888777788887778888888873 68888888888888888887764
No 75
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=99.67 E-value=1.4e-17 Score=143.05 Aligned_cols=59 Identities=34% Similarity=0.634 Sum_probs=56.0
Q ss_pred CCCCccCCCCCCCCCCchhhhccccccCCCCcccCCcccccccccCchhhhhhcccccCCC
Q psy8969 1133 SSENNVCPECKKTFSSAHHMKVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEK 1193 (1230)
Q Consensus 1133 ~~kpy~C~~CgK~F~s~s~Lk~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEK 1193 (1230)
+++||.|++|||.|.+.++|.+|+++|+|+|||+|+ +|||+|.++++|++|+++|+||+
T Consensus 1 SEKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~--~C~k~F~~~~~L~~H~~~Htgep 59 (60)
T 4gzn_C 1 SERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCP--ECGKCFRDQSEVNRHLKVHQNKP 59 (60)
T ss_dssp CCCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECT--TTCCEESSHHHHHHHGGGGSCC-
T ss_pred CCCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECC--CCCCCcCCHHHHHHHhCccCCCC
Confidence 479999999999999999999999999999999995 69999999999999999999986
No 76
>3u61_B DNA polymerase accessory protein 44; AAA+, ATP hydrolase, clamp loader, sliding clamp, primer-TEM DNA, DNA binding protein-DNA complex; HET: DNA ADP 08T; 3.20A {Enterobacteria phage T4} PDB: 3u5z_B* 3u60_B*
Probab=99.67 E-value=8.4e-17 Score=184.66 Aligned_cols=207 Identities=20% Similarity=0.296 Sum_probs=137.2
Q ss_pred ccccChHHHHHHHHHHHHHhhhcCCCCCceEEEeCCCCCCchHHHHHHHHHhCCCeEEEecCCcchhHHHhhcccccccc
Q psy8969 354 DDHYGMEDVKKRILEFIAVSQLKGTTQGKILCFYGPPGVGKTSIAKSIARALNREYFRFSVGGMSDVAEIKGHRRTYVGA 433 (1230)
Q Consensus 354 ~d~~G~~~vK~~i~e~l~~~~~~~~~~~~~llL~GPPG~GKTslak~iA~~l~~~~~~~~~~~~~d~~~i~g~~~~~~g~ 433 (1230)
++++|++++++.|.+++. ....+..+||+||||||||++|++||+.++.+|+.++.+... ...++.....+...
T Consensus 26 ~~ivg~~~~~~~l~~~l~-----~~~~~~~~L~~G~~G~GKT~la~~la~~l~~~~~~i~~~~~~-~~~i~~~~~~~~~~ 99 (324)
T 3u61_B 26 DECILPAFDKETFKSITS-----KGKIPHIILHSPSPGTGKTTVAKALCHDVNADMMFVNGSDCK-IDFVRGPLTNFASA 99 (324)
T ss_dssp TTSCCCHHHHHHHHHHHH-----TTCCCSEEEECSSTTSSHHHHHHHHHHHTTEEEEEEETTTCC-HHHHHTHHHHHHHB
T ss_pred HHHhCcHHHHHHHHHHHH-----cCCCCeEEEeeCcCCCCHHHHHHHHHHHhCCCEEEEcccccC-HHHHHHHHHHHHhh
Confidence 578999999999999885 223446788899999999999999999999999999975533 22222111111110
Q ss_pred CchhHHHHHHhhcCCCCEEEEecccccCCCCCCChhhHHHhhcChhhhhhhhhhccCccccCCceEEEEecCCCCCCCHh
Q psy8969 434 MPGKVIQCMKKTKTENPLVLIDEVDKIGKGYSGDPASALLEMLDPEQNANFLDHYLDVPVDLSRVLFICTANVIDTIPEP 513 (1230)
Q Consensus 434 ~~g~i~~~~~~~~~~~pvillDEIDk~~~~~~~~~~~all~~ld~~q~~~f~d~~~~~~~d~s~v~~I~TaN~~~~I~~~ 513 (1230)
.+ ......||||||||.+.. .+..++|+..++.. .+++.||+|+|..+.++++
T Consensus 100 ~~---------~~~~~~vliiDEi~~l~~---~~~~~~L~~~le~~---------------~~~~~iI~~~n~~~~l~~~ 152 (324)
T 3u61_B 100 AS---------FDGRQKVIVIDEFDRSGL---AESQRHLRSFMEAY---------------SSNCSIIITANNIDGIIKP 152 (324)
T ss_dssp CC---------CSSCEEEEEEESCCCGGG---HHHHHHHHHHHHHH---------------GGGCEEEEEESSGGGSCTT
T ss_pred cc---------cCCCCeEEEEECCcccCc---HHHHHHHHHHHHhC---------------CCCcEEEEEeCCccccCHH
Confidence 00 011346999999999851 12345666665431 1467899999999999999
Q ss_pred hhcccceeecCCCCHHHHHHHHHHhh--cchhHHhcCCCCCCcccCH-HHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHH
Q psy8969 514 LRDRMEMIDVSGYVAEEKVAIAAQYL--IPQAMKESGLSPEQITLEP-SAIQVLIKNYCRESGVRNLQKHIEKVTRKVAL 590 (1230)
Q Consensus 514 L~~R~~~i~~~~~~~~e~~~i~~~~l--~~~~~~~~gl~~~~i~~~~-~~~~~li~~~~~e~gvR~l~~~i~~i~r~~~~ 590 (1230)
|++||.+|.+..|+.+|...|+...+ +.+.+... .+.+++ +++..+++. ..+++|.+...++.++
T Consensus 153 l~sR~~~i~~~~~~~~e~~~il~~~~~~l~~~~~~~-----~~~~~~~~~~~~l~~~--~~gd~R~a~~~L~~~~----- 220 (324)
T 3u61_B 153 LQSRCRVITFGQPTDEDKIEMMKQMIRRLTEICKHE-----GIAIADMKVVAALVKK--NFPDFRKTIGELDSYS----- 220 (324)
T ss_dssp HHHHSEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH-----TCCBSCHHHHHHHHHH--TCSCTTHHHHHHHHHG-----
T ss_pred HHhhCcEEEeCCCCHHHHHHHHHHHHHHHHHHHHHc-----CCCCCcHHHHHHHHHh--CCCCHHHHHHHHHHHh-----
Confidence 99999999999999999877765543 22233333 456777 888888866 4577888777666543
Q ss_pred HHhhcCCCceEechhhhhhhcC
Q psy8969 591 TIVKKESDKVTVTNDNLSDFVG 612 (1230)
Q Consensus 591 ~~~~~~~~~~~i~~~~~~~~~~ 612 (1230)
... .|+.+.+.+.++
T Consensus 221 ---~~~----~i~~~~v~~~~~ 235 (324)
T 3u61_B 221 ---SKG----VLDAGILSLVTN 235 (324)
T ss_dssp ---GGT----CBCC--------
T ss_pred ---ccC----CCCHHHHHHHhC
Confidence 111 266666665554
No 77
>3te6_A Regulatory protein SIR3; heterochromatin, gene silencing, SIR complex, HMR, HML, TELO AAA+ domain, structural, nucleus, gene RE; 2.80A {Saccharomyces cerevisiae}
Probab=99.66 E-value=9.3e-16 Score=174.94 Aligned_cols=229 Identities=14% Similarity=0.113 Sum_probs=141.6
Q ss_pred ChHHHHHHHHHHHHHhhhcCCCCCceEEEeCCCCCCchHHHHHHHHHhC----------CCeEEEecCCcchh-------
Q psy8969 358 GMEDVKKRILEFIAVSQLKGTTQGKILCFYGPPGVGKTSIAKSIARALN----------REYFRFSVGGMSDV------- 420 (1230)
Q Consensus 358 G~~~vK~~i~e~l~~~~~~~~~~~~~llL~GPPG~GKTslak~iA~~l~----------~~~~~~~~~~~~d~------- 420 (1230)
|=++=.+.|..+|... +. ...|+.|+|+||||||||++++.+++.+. ..++.+++-.+.+.
T Consensus 24 ~Re~E~~~i~~~L~~~-i~-~~~~~~lli~GpPGTGKT~~v~~v~~~L~~~~~~~~~~~~~~v~INc~~~~t~~~~~~~I 101 (318)
T 3te6_A 24 SQVEDFTRIFLPIYDS-LM-SSQNKLFYITNADDSTKFQLVNDVMDELITSSARKELPIFDYIHIDALELAGMDALYEKI 101 (318)
T ss_dssp HHHHHHHHHHHHHHHH-HH-TTCCCEEEEECCCSHHHHHHHHHHHHHHHHTTTTTSSCCEEEEEEETTCCC--HHHHHHH
T ss_pred CHHHHHHHHHHHHHHH-hc-CCCCCeEEEECCCCCCHHHHHHHHHHHHHHHhhhccCCceEEEEEeccccCCHHHHHHHH
Confidence 3344445555565322 22 35678899999999999999999999993 34566665555442
Q ss_pred -HHHhhccccccccCchhHHHHHHhh---cCCCCEEEEecccccCCCCCCChhhHHHhhcChhhhhhhhhhccCccccCC
Q psy8969 421 -AEIKGHRRTYVGAMPGKVIQCMKKT---KTENPLVLIDEVDKIGKGYSGDPASALLEMLDPEQNANFLDHYLDVPVDLS 496 (1230)
Q Consensus 421 -~~i~g~~~~~~g~~~g~i~~~~~~~---~~~~pvillDEIDk~~~~~~~~~~~all~~ld~~q~~~f~d~~~~~~~d~s 496 (1230)
..+.|++.++ |.....+...|... .....||+|||||.+. ....|+.+++-. ..+.+
T Consensus 102 ~~~L~g~~~~~-~~~~~~L~~~f~~~~~~~~~~~ii~lDE~d~l~------~q~~L~~l~~~~------------~~~~s 162 (318)
T 3te6_A 102 WFAISKENLCG-DISLEALNFYITNVPKAKKRKTLILIQNPENLL------SEKILQYFEKWI------------SSKNS 162 (318)
T ss_dssp HHHHSCCC--C-CCCHHHHHHHHHHSCGGGSCEEEEEEECCSSSC------CTHHHHHHHHHH------------HCSSC
T ss_pred HHHhcCCCCCc-hHHHHHHHHHHHHhhhccCCceEEEEecHHHhh------cchHHHHHHhcc------------cccCC
Confidence 2344554332 32323444555543 3334588899999986 134555544321 13568
Q ss_pred ceEEEEecCCCCCC----CHhhhccc--ceeecCCCCHHHHHHHHHHhhcchhHHhcC----------------------
Q psy8969 497 RVLFICTANVIDTI----PEPLRDRM--EMIDVSGYVAEEKVAIAAQYLIPQAMKESG---------------------- 548 (1230)
Q Consensus 497 ~v~~I~TaN~~~~I----~~~L~~R~--~~i~~~~~~~~e~~~i~~~~l~~~~~~~~g---------------------- 548 (1230)
++++|+++|.++.. +++++||| ++|.|.+|+.+|...|+++.+-. . ..+
T Consensus 163 ~~~vI~i~n~~d~~~~~L~~~v~SR~~~~~i~F~pYt~~el~~Il~~Rl~~--~-~~~~f~~~~~~~~~~~~~~~~~~~~ 239 (318)
T 3te6_A 163 KLSIICVGGHNVTIREQINIMPSLKAHFTEIKLNKVDKNELQQMIITRLKS--L-LKPFHVKVNDKKEMTIYNNIREGQN 239 (318)
T ss_dssp CEEEEEECCSSCCCHHHHHTCHHHHTTEEEEECCCCCHHHHHHHHHHHHHH--H-CCCEEEEECTTCCEEECCCC-----
T ss_pred cEEEEEEecCcccchhhcchhhhccCCceEEEeCCCCHHHHHHHHHHHHHh--h-hcccccccccccccccccccccccc
Confidence 99999999998743 44557898 57999999999999999888732 1 111
Q ss_pred ------CCCCCcccCHHHHHHHHHHhhh-hhhHHHHHHHHHHHHHHHHHHHhhc---CCCceEechhhhhhh
Q psy8969 549 ------LSPEQITLEPSAIQVLIKNYCR-ESGVRNLQKHIEKVTRKVALTIVKK---ESDKVTVTNDNLSDF 610 (1230)
Q Consensus 549 ------l~~~~i~~~~~~~~~li~~~~~-e~gvR~l~~~i~~i~r~~~~~~~~~---~~~~~~i~~~~~~~~ 610 (1230)
+....+.+++++++.+.+..+. .+++|..-..++....-+-.+..++ .+.+++||.+.++++
T Consensus 240 ~~~~~~~~~~~~~i~~~ai~~~A~~vA~~~GD~R~Al~ilr~A~~~ae~e~~~k~~~~~~~~~i~~~~~~~~ 311 (318)
T 3te6_A 240 QKIPDNVIVINHKINNKITQLIAKNVANVSGSTEKAFKICEAAVEISKKDFVRKGGLQKGKLVVSQEMVPRY 311 (318)
T ss_dssp ---CTTEEEECEECCHHHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHTTEETTEECCSEECCTHH
T ss_pred ccccccccccccccCHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHhccCCCCCcEEeeHHHHHHH
Confidence 1122347899999999887655 4557765554444333222222221 234567777766554
No 78
>1ixz_A ATP-dependent metalloprotease FTSH; AAA domain fold, hydrolase; 2.20A {Thermus thermophilus} SCOP: c.37.1.20 PDB: 1iy0_A* 1iy1_A*
Probab=99.66 E-value=6e-16 Score=171.40 Aligned_cols=224 Identities=19% Similarity=0.289 Sum_probs=135.2
Q ss_pred ccccChHHHHHHHHHHHHHhh----hc--CCCCCceEEEeCCCCCCchHHHHHHHHHhCCCeEEEecCCcchhHHHhhcc
Q psy8969 354 DDHYGMEDVKKRILEFIAVSQ----LK--GTTQGKILCFYGPPGVGKTSIAKSIARALNREYFRFSVGGMSDVAEIKGHR 427 (1230)
Q Consensus 354 ~d~~G~~~vK~~i~e~l~~~~----~~--~~~~~~~llL~GPPG~GKTslak~iA~~l~~~~~~~~~~~~~d~~~i~g~~ 427 (1230)
+|++|++++|+.+.+.+.... +. +...+++++|+||||||||+|+++||..++.+++.++...+.+
T Consensus 16 ~~i~g~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~g~ll~G~~G~GKTtl~~~i~~~~~~~~i~~~~~~~~~-------- 87 (254)
T 1ixz_A 16 KDVAGAEEAKEELKEIVEFLKNPSRFHEMGARIPKGVLLVGPPGVGKTHLARAVAGEARVPFITASGSDFVE-------- 87 (254)
T ss_dssp GGCCSCHHHHHHHHHHHHHHHCHHHHHHTTCCCCSEEEEECCTTSSHHHHHHHHHHHTTCCEEEEEHHHHHH--------
T ss_pred HHhCCcHHHHHHHHHHHHHHHCHHHHHHcCCCCCCeEEEECCCCCCHHHHHHHHHHHhCCCEEEeeHHHHHH--------
Confidence 579999999998877654321 11 2234556999999999999999999999999998887532221
Q ss_pred ccccccCchhHHHHHHhhcCCC-CEEEEecccccCCCCCCC---hhhHHHhhcChhhhhhhhhhccCccccCCceEEEEe
Q psy8969 428 RTYVGAMPGKVIQCMKKTKTEN-PLVLIDEVDKIGKGYSGD---PASALLEMLDPEQNANFLDHYLDVPVDLSRVLFICT 503 (1230)
Q Consensus 428 ~~~~g~~~g~i~~~~~~~~~~~-pvillDEIDk~~~~~~~~---~~~all~~ld~~q~~~f~d~~~~~~~d~s~v~~I~T 503 (1230)
.+.|.....+...|..+.... .+++|||||.++..+... ......+.+ ..++..+.+. -....+++++|
T Consensus 88 -~~~~~~~~~i~~~~~~~~~~~~~i~~~Deid~l~~~~~~~~~~~~~~~~~~~-----~~ll~~l~g~-~~~~~~i~~a~ 160 (254)
T 1ixz_A 88 -MFVGVGAARVRDLFETAKRHAPCIVFIDEIDAVGRKRGSGVGGGNDEREQTL-----NQLLVEMDGF-EKDTAIVVMAA 160 (254)
T ss_dssp -SCTTHHHHHHHHHHHHHTTSSSEEEEEETHHHHHC---------CHHHHHHH-----HHHHHHHHTC-CTTCCEEEEEE
T ss_pred -HHhhHHHHHHHHHHHHHHhcCCeEEEehhhhhhhcccCccccccchHHHHHH-----HHHHHHHhCC-CCCCCEEEEEc
Confidence 234444455666777765444 488899999986533210 001100110 0111111111 11245788899
Q ss_pred cCCCCCCCHhhhc--ccc-eeecCCCCHHHHHHHHHHhhcchhHHhcCCCCCCcccCHHH-HHHHHHHhhhhhhHHHHHH
Q psy8969 504 ANVIDTIPEPLRD--RME-MIDVSGYVAEEKVAIAAQYLIPQAMKESGLSPEQITLEPSA-IQVLIKNYCRESGVRNLQK 579 (1230)
Q Consensus 504 aN~~~~I~~~L~~--R~~-~i~~~~~~~~e~~~i~~~~l~~~~~~~~gl~~~~i~~~~~~-~~~li~~~~~e~gvR~l~~ 579 (1230)
+|.++.||++|++ ||+ .|.+..|+.++...|++.++- ++ .+++++ +..+ ...|.+.-.|.|+.
T Consensus 161 t~~p~~ld~~l~r~~rf~~~i~i~~p~~~~r~~il~~~~~-------~~-----~~~~~~~~~~l-a~~~~G~~~~dl~~ 227 (254)
T 1ixz_A 161 TNRPDILDPALLRPGRFDRQIAIDAPDVKGREQILRIHAR-------GK-----PLAEDVDLALL-AKRTPGFVGADLEN 227 (254)
T ss_dssp ESCGGGSCGGGGSTTSSCEEEECCSCCHHHHHHHHHHHHT-------TS-----CBCTTCCHHHH-HHTCTTCCHHHHHH
T ss_pred cCCchhCCHHHcCCCcCCeEEeeCCcCHHHHHHHHHHHHc-------CC-----CCCcccCHHHH-HHHcCCCCHHHHHH
Confidence 9999999999998 776 578889999999988876531 11 122222 3333 34444433366666
Q ss_pred HHHHHHHHHHHHHhhcCCCceEechhhhhhhc
Q psy8969 580 HIEKVTRKVALTIVKKESDKVTVTNDNLSDFV 611 (1230)
Q Consensus 580 ~i~~i~r~~~~~~~~~~~~~~~i~~~~~~~~~ 611 (1230)
.+..+...+. ... ...|+.+++++.+
T Consensus 228 ~~~~a~~~a~----~~~--~~~I~~~dl~~a~ 253 (254)
T 1ixz_A 228 LLNEAALLAA----REG--RRKITMKDLEEAA 253 (254)
T ss_dssp HHHHHHHHHH----HTT--CSSBCHHHHHHHT
T ss_pred HHHHHHHHHH----Hhc--CCCcCHHHHHHHh
Confidence 5555443322 211 1247777777654
No 79
>2r44_A Uncharacterized protein; putative ATPase, structural genomics, joint center for struc genomics, JCSG; HET: MSE PG4; 2.00A {Cytophaga hutchinsonii atcc 33406}
Probab=99.65 E-value=1.8e-15 Score=174.18 Aligned_cols=203 Identities=20% Similarity=0.240 Sum_probs=135.0
Q ss_pred HHHHhhhhcccccChHHHHHHHHHHHHHhhhcCCCCCceEEEeCCCCCCchHHHHHHHHHhCCCeEEEecCCcchhHHHh
Q psy8969 345 LTQAAKILDDDHYGMEDVKKRILEFIAVSQLKGTTQGKILCFYGPPGVGKTSIAKSIARALNREYFRFSVGGMSDVAEIK 424 (1230)
Q Consensus 345 ~~~~~~~l~~d~~G~~~vK~~i~e~l~~~~~~~~~~~~~llL~GPPG~GKTslak~iA~~l~~~~~~~~~~~~~d~~~i~ 424 (1230)
+.+.+..+.++++|++++++.++..+.. +..+||+||||||||++|++||+.++.+|+++++.......++.
T Consensus 18 ~~~~~~~~~~~i~g~~~~~~~l~~~l~~--------~~~vll~G~pGtGKT~la~~la~~~~~~~~~i~~~~~~~~~~l~ 89 (331)
T 2r44_A 18 IKEVIDEVGKVVVGQKYMINRLLIGICT--------GGHILLEGVPGLAKTLSVNTLAKTMDLDFHRIQFTPDLLPSDLI 89 (331)
T ss_dssp HHHHHHHHTTTCCSCHHHHHHHHHHHHH--------TCCEEEESCCCHHHHHHHHHHHHHTTCCEEEEECCTTCCHHHHH
T ss_pred HHHHHHHhccceeCcHHHHHHHHHHHHc--------CCeEEEECCCCCcHHHHHHHHHHHhCCCeEEEecCCCCChhhcC
Confidence 5667777889999999999999887743 34799999999999999999999999999999875333334444
Q ss_pred hccccccccCchhHHHHHHhhcCCCCEEEEecccccCCCCCCChhhHHHhhcChhhhhhhhhhccCcccc-CCceEEEEe
Q psy8969 425 GHRRTYVGAMPGKVIQCMKKTKTENPLVLIDEVDKIGKGYSGDPASALLEMLDPEQNANFLDHYLDVPVD-LSRVLFICT 503 (1230)
Q Consensus 425 g~~~~~~g~~~g~i~~~~~~~~~~~pvillDEIDk~~~~~~~~~~~all~~ld~~q~~~f~d~~~~~~~d-~s~v~~I~T 503 (1230)
|... .+...|.. .+........|+||||||++. .+..++|++.++..+... .+...+ -.++++|+|
T Consensus 90 g~~~--~~~~~~~~--~~~~g~l~~~vl~iDEi~~~~----~~~~~~Ll~~l~~~~~~~-----~g~~~~~~~~~~viat 156 (331)
T 2r44_A 90 GTMI--YNQHKGNF--EVKKGPVFSNFILADEVNRSP----AKVQSALLECMQEKQVTI-----GDTTYPLDNPFLVLAT 156 (331)
T ss_dssp EEEE--EETTTTEE--EEEECTTCSSEEEEETGGGSC----HHHHHHHHHHHHHSEEEE-----TTEEEECCSSCEEEEE
T ss_pred Ccee--ecCCCCce--EeccCcccccEEEEEccccCC----HHHHHHHHHHHhcCceee-----CCEEEECCCCEEEEEe
Confidence 4321 01000100 000000024699999999974 345678888876533111 111122 236788899
Q ss_pred cCCCC-----CCCHhhhcccce-eecCCCCHHHHHHHHHHhhcchhHH--hcCCC----------CCCcccCHHHHHHHH
Q psy8969 504 ANVID-----TIPEPLRDRMEM-IDVSGYVAEEKVAIAAQYLIPQAMK--ESGLS----------PEQITLEPSAIQVLI 565 (1230)
Q Consensus 504 aN~~~-----~I~~~L~~R~~~-i~~~~~~~~e~~~i~~~~l~~~~~~--~~gl~----------~~~i~~~~~~~~~li 565 (1230)
+|+.+ .++++|+|||.+ +.+..++.++...|+++.+-..... ...+. ...+.++++++..++
T Consensus 157 ~np~~~~~~~~l~~~l~~Rf~~~i~i~~p~~~~~~~il~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~v~~~~~~~~~i~ 236 (331)
T 2r44_A 157 QNPVEQEGTYPLPEAQVDRFMMKIHLTYLDKESELEVMRRVSNMNFNYQVQKIVSKNDVLEIRNEINKVTISESLEKYII 236 (331)
T ss_dssp ECTTCCSCCCCCCHHHHTTSSEEEECCCCCHHHHHHHHHHHHCTTCCCCCCCCSCHHHHHHHHHHHHTCBCCHHHHHHHH
T ss_pred cCCCcccCcccCCHHHHhheeEEEEcCCCCHHHHHHHHHhccccCcchhccccCCHHHHHHHHHHhccCCCCHHHHHHHH
Confidence 99664 389999999995 8999999999999998876321000 00000 025678888888876
Q ss_pred HHh
Q psy8969 566 KNY 568 (1230)
Q Consensus 566 ~~~ 568 (1230)
+-+
T Consensus 237 ~~~ 239 (331)
T 2r44_A 237 ELV 239 (331)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
No 80
>2c9o_A RUVB-like 1; hexameric helicase, AAA+-ATPase, ATP-binding, chromatin regulator, growth regulation, hydrolase, nuclear protein, DNA recombination; HET: ADP; 2.2A {Homo sapiens} PDB: 2xsz_A*
Probab=99.65 E-value=1.1e-15 Score=183.88 Aligned_cols=102 Identities=18% Similarity=0.274 Sum_probs=81.7
Q ss_pred hcccccChHHHHHHHHHHHHHhhhcCCCCCceEEEeCCCCCCchHHHHHHHHHhC--CCeEEEecCCcchhHHHhhcccc
Q psy8969 352 LDDDHYGMEDVKKRILEFIAVSQLKGTTQGKILCFYGPPGVGKTSIAKSIARALN--REYFRFSVGGMSDVAEIKGHRRT 429 (1230)
Q Consensus 352 l~~d~~G~~~vK~~i~e~l~~~~~~~~~~~~~llL~GPPG~GKTslak~iA~~l~--~~~~~~~~~~~~d~~~i~g~~~~ 429 (1230)
+.++++|++++|+.+.+++.. ...+...+.++||+||||||||++|++||+.++ .+|+.++.+.+.+ .
T Consensus 35 ~~~~iiG~~~~~~~l~~~~~~-~~~~~~~~~~iLl~GppGtGKT~la~ala~~l~~~~~~~~~~~~~~~~---------~ 104 (456)
T 2c9o_A 35 AASGLVGQENAREACGVIVEL-IKSKKMAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYS---------T 104 (456)
T ss_dssp EETTEESCHHHHHHHHHHHHH-HHTTCCTTCEEEEECCTTSSHHHHHHHHHHHHCTTSCEEEEEGGGGCC---------S
T ss_pred chhhccCHHHHHHHHHHHHHH-HHhCCCCCCeEEEECCCcCCHHHHHHHHHHHhCCCceEEEEeHHHHHH---------H
Confidence 457899999999998887743 334556678899999999999999999999999 8999998765544 5
Q ss_pred ccccCchhHHHHHHhh---cCC-CCEEEEecccccCCCC
Q psy8969 430 YVGAMPGKVIQCMKKT---KTE-NPLVLIDEVDKIGKGY 464 (1230)
Q Consensus 430 ~~g~~~g~i~~~~~~~---~~~-~pvillDEIDk~~~~~ 464 (1230)
|+|.... +.+.|..+ ... +.||||||||.+...+
T Consensus 105 ~~~~~~~-~~~~f~~a~~~~~~~~~il~iDEid~l~~~r 142 (456)
T 2c9o_A 105 EIKKTEV-LMENFRRAIGLRIKETKEVYEGEVTELTPCE 142 (456)
T ss_dssp SSCHHHH-HHHHHHHTEEEEEEEEEEEEEEEEEEEEEC-
T ss_pred hhhhhHH-HHHHHHHHHhhhhcCCcEEEEechhhccccc
Confidence 7887765 88888887 443 4488999999997544
No 81
>2chg_A Replication factor C small subunit; DNA-binding protein, DNA replication, clamp loader, AAA+ ATPase, ATP-binding, nucleotide-binding; HET: ANP; 2.1A {Archaeoglobus fulgidus}
Probab=99.65 E-value=1.7e-15 Score=161.92 Aligned_cols=202 Identities=19% Similarity=0.320 Sum_probs=139.5
Q ss_pred hcccccChHHHHHHHHHHHHHhhhcCCCCCceEEEeCCCCCCchHHHHHHHHHh-----CCCeEEEecCCcchhHHHhhc
Q psy8969 352 LDDDHYGMEDVKKRILEFIAVSQLKGTTQGKILCFYGPPGVGKTSIAKSIARAL-----NREYFRFSVGGMSDVAEIKGH 426 (1230)
Q Consensus 352 l~~d~~G~~~vK~~i~e~l~~~~~~~~~~~~~llL~GPPG~GKTslak~iA~~l-----~~~~~~~~~~~~~d~~~i~g~ 426 (1230)
.-++++|.+++++.+.+++.. ..++.++|+||||||||++|+++|+.+ ...++.++.+.......+..
T Consensus 15 ~~~~~~g~~~~~~~l~~~l~~------~~~~~~ll~G~~G~GKT~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 87 (226)
T 2chg_A 15 TLDEVVGQDEVIQRLKGYVER------KNIPHLLFSGPPGTGKTATAIALARDLFGENWRDNFIEMNASDERGIDVVRH- 87 (226)
T ss_dssp SGGGCCSCHHHHHHHHHHHHT------TCCCCEEEECSTTSSHHHHHHHHHHHHHGGGGGGGEEEEETTCTTCHHHHHH-
T ss_pred CHHHHcCcHHHHHHHHHHHhC------CCCCeEEEECCCCCCHHHHHHHHHHHHhccccccceEEeccccccChHHHHH-
Confidence 345789999999999998852 123459999999999999999999987 34567676544332211111
Q ss_pred cccccccCchhHHHHHHhh----cCCCCEEEEecccccCCCCCCChhhHHHhhcChhhhhhhhhhccCccccCCceEEEE
Q psy8969 427 RRTYVGAMPGKVIQCMKKT----KTENPLVLIDEVDKIGKGYSGDPASALLEMLDPEQNANFLDHYLDVPVDLSRVLFIC 502 (1230)
Q Consensus 427 ~~~~~g~~~g~i~~~~~~~----~~~~pvillDEIDk~~~~~~~~~~~all~~ld~~q~~~f~d~~~~~~~d~s~v~~I~ 502 (1230)
.+..+... .....||+|||+|.+.. +....|+.+++. ...++.+|+
T Consensus 88 -----------~~~~~~~~~~~~~~~~~vliiDe~~~l~~----~~~~~l~~~l~~---------------~~~~~~~i~ 137 (226)
T 2chg_A 88 -----------KIKEFARTAPIGGAPFKIIFLDEADALTA----DAQAALRRTMEM---------------YSKSCRFIL 137 (226)
T ss_dssp -----------HHHHHHTSCCSTTCSCEEEEEETGGGSCH----HHHHHHHHHHHH---------------TTTTEEEEE
T ss_pred -----------HHHHHhcccCCCccCceEEEEeChhhcCH----HHHHHHHHHHHh---------------cCCCCeEEE
Confidence 11111111 13355899999999743 224455555432 124678899
Q ss_pred ecCCCCCCCHhhhcccceeecCCCCHHHHHHHHHHhhcchhHHhcCCCCCCcccCHHHHHHHHHHhhhhhhHHHHHHHHH
Q psy8969 503 TANVIDTIPEPLRDRMEMIDVSGYVAEEKVAIAAQYLIPQAMKESGLSPEQITLEPSAIQVLIKNYCRESGVRNLQKHIE 582 (1230)
Q Consensus 503 TaN~~~~I~~~L~~R~~~i~~~~~~~~e~~~i~~~~l~~~~~~~~gl~~~~i~~~~~~~~~li~~~~~e~gvR~l~~~i~ 582 (1230)
|+|....++++|++|+.++.+.+++.+|...++.+.+ ...|+ .++++++..+++. ..+.+|.+.+.++
T Consensus 138 ~~~~~~~~~~~l~~r~~~i~~~~~~~~~~~~~l~~~~-----~~~~~-----~~~~~~~~~l~~~--~~g~~r~l~~~l~ 205 (226)
T 2chg_A 138 SCNYVSRIIEPIQSRCAVFRFKPVPKEAMKKRLLEIC-----EKEGV-----KITEDGLEALIYI--SGGDFRKAINALQ 205 (226)
T ss_dssp EESCGGGSCHHHHTTSEEEECCCCCHHHHHHHHHHHH-----HHHTC-----CBCHHHHHHHHHH--HTTCHHHHHHHHH
T ss_pred EeCChhhcCHHHHHhCceeecCCCCHHHHHHHHHHHH-----HHcCC-----CCCHHHHHHHHHH--cCCCHHHHHHHHH
Confidence 9999999999999999999999999999988776654 23333 4788888888854 3667888877777
Q ss_pred HHHHHHHHHHhhcCCCceEechhhhhhhcCC
Q psy8969 583 KVTRKVALTIVKKESDKVTVTNDNLSDFVGK 613 (1230)
Q Consensus 583 ~i~r~~~~~~~~~~~~~~~i~~~~~~~~~~~ 613 (1230)
.++.. . -.|+.+++.+.++.
T Consensus 206 ~~~~~-------~----~~I~~~~v~~~~~~ 225 (226)
T 2chg_A 206 GAAAI-------G----EVVDADTIYQITAT 225 (226)
T ss_dssp HHHHT-------C----SCBCHHHHHHHHHT
T ss_pred HHHhc-------C----ceecHHHHHHHhcC
Confidence 65432 1 15888888887764
No 82
>1iy2_A ATP-dependent metalloprotease FTSH; AAA domain fold, hydrolase; 3.20A {Thermus thermophilus} SCOP: c.37.1.20
Probab=99.64 E-value=1.3e-15 Score=171.25 Aligned_cols=228 Identities=19% Similarity=0.277 Sum_probs=137.2
Q ss_pred hhhcccccChHHHHHHHHHHHHHhh----hc--CCCCCceEEEeCCCCCCchHHHHHHHHHhCCCeEEEecCCcchhHHH
Q psy8969 350 KILDDDHYGMEDVKKRILEFIAVSQ----LK--GTTQGKILCFYGPPGVGKTSIAKSIARALNREYFRFSVGGMSDVAEI 423 (1230)
Q Consensus 350 ~~l~~d~~G~~~vK~~i~e~l~~~~----~~--~~~~~~~llL~GPPG~GKTslak~iA~~l~~~~~~~~~~~~~d~~~i 423 (1230)
.+-.+|++|++++|+.+.+.+.... +. +...+++++|+||||||||+|+++||..++.+++.++...+.+
T Consensus 36 ~~~~~~i~g~~~~~~~l~~l~~~~~~~~~l~~~~~~~~~gvll~Gp~GtGKTtl~~~i~~~~~~~~i~~~~~~~~~---- 111 (278)
T 1iy2_A 36 KVTFKDVAGAEEAKEELKEIVEFLKNPSRFHEMGARIPKGVLLVGPPGVGKTHLARAVAGEARVPFITASGSDFVE---- 111 (278)
T ss_dssp CCCGGGSSSCHHHHHHHHHHHHHHHCHHHHHHTTCCCCCEEEEECCTTSSHHHHHHHHHHHTTCCEEEEEHHHHHH----
T ss_pred CCCHHHhCChHHHHHHHHHHHHHHHCHHHHHHcCCCCCCeEEEECCCcChHHHHHHHHHHHcCCCEEEecHHHHHH----
Confidence 3445689999999999877654321 11 2233456999999999999999999999999998887533221
Q ss_pred hhccccccccCchhHHHHHHhhcCCC-CEEEEecccccCCCCCCC---hhhHHHhhcChhhhhhhhhhccCccccCCceE
Q psy8969 424 KGHRRTYVGAMPGKVIQCMKKTKTEN-PLVLIDEVDKIGKGYSGD---PASALLEMLDPEQNANFLDHYLDVPVDLSRVL 499 (1230)
Q Consensus 424 ~g~~~~~~g~~~g~i~~~~~~~~~~~-pvillDEIDk~~~~~~~~---~~~all~~ld~~q~~~f~d~~~~~~~d~s~v~ 499 (1230)
.+.|.....+...|..+.... .+++|||||.++...... ......+.+ ..++..+.+. -....++
T Consensus 112 -----~~~~~~~~~i~~~~~~~~~~~~~i~~iDeid~l~~~~~~~~~~~~~~~~~~~-----~~ll~~lsgg-~~~~~~i 180 (278)
T 1iy2_A 112 -----MFVGVGAARVRDLFETAKRHAPCIVFIDEIDAVGRKRGSGVGGGNDEREQTL-----NQLLVEMDGF-EKDTAIV 180 (278)
T ss_dssp -----STTTHHHHHHHHHHHHHHTSCSEEEEEETHHHHHCC--------CHHHHHHH-----HHHHHHHTTC-CTTCCEE
T ss_pred -----HHhhHHHHHHHHHHHHHHhcCCcEEehhhhHhhhcccccccCCcchHHHHHH-----HHHHHHHhCC-CCCCCEE
Confidence 233444455666676665433 488899999986533211 000001111 0111111111 1224578
Q ss_pred EEEecCCCCCCCHhhhc--ccc-eeecCCCCHHHHHHHHHHhhcchhHHhcCCCCCCcccCHHH-HHHHHHHhhhhhhHH
Q psy8969 500 FICTANVIDTIPEPLRD--RME-MIDVSGYVAEEKVAIAAQYLIPQAMKESGLSPEQITLEPSA-IQVLIKNYCRESGVR 575 (1230)
Q Consensus 500 ~I~TaN~~~~I~~~L~~--R~~-~i~~~~~~~~e~~~i~~~~l~~~~~~~~gl~~~~i~~~~~~-~~~li~~~~~e~gvR 575 (1230)
+++|+|.++.||+++++ ||+ +|.+..|+.++...|++.++- .. .+++++ +..+ ...|.+.-.|
T Consensus 181 ~~a~t~~p~~ld~~l~r~~rf~~~i~i~~p~~~~r~~il~~~~~-----~~-------~~~~~~~~~~l-a~~~~G~~~~ 247 (278)
T 1iy2_A 181 VMAATNRPDILDPALLRPGRFDRQIAIDAPDVKGREQILRIHAR-----GK-------PLAEDVDLALL-AKRTPGFVGA 247 (278)
T ss_dssp EEEEESCTTSSCHHHHSTTSSCCEEECCCCCHHHHHHHHHHHHT-----TS-------CBCTTCCHHHH-HHTCTTCCHH
T ss_pred EEEecCCchhCCHhHcCCCcCCeEEEeCCcCHHHHHHHHHHHHc-----cC-------CCCcccCHHHH-HHHcCCCCHH
Confidence 88999999999999998 776 578999999999998876541 11 222222 3333 3444433336
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCceEechhhhhhhc
Q psy8969 576 NLQKHIEKVTRKVALTIVKKESDKVTVTNDNLSDFV 611 (1230)
Q Consensus 576 ~l~~~i~~i~r~~~~~~~~~~~~~~~i~~~~~~~~~ 611 (1230)
.|+..+..+...+. ... ...|+.+++++.+
T Consensus 248 dl~~l~~~a~~~a~----~~~--~~~I~~~dl~~a~ 277 (278)
T 1iy2_A 248 DLENLLNEAALLAA----REG--RRKITMKDLEEAA 277 (278)
T ss_dssp HHHHHHHHHHHHHH----HTT--CCSBCHHHHHHHT
T ss_pred HHHHHHHHHHHHHH----HhC--CCCcCHHHHHHHh
Confidence 66665555443322 111 2247777777654
No 83
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=99.63 E-value=2.8e-16 Score=149.72 Aligned_cols=91 Identities=37% Similarity=0.704 Sum_probs=53.6
Q ss_pred CCCCCCCCCCCCCCCCccChhHHHhhhhcccCCCceecCCCccCccccChhhHHHHHhhccCCCCccccccccccccCCc
Q psy8969 787 TSERPFPCPVLGCDRSFTTSNIRKVHIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEY 866 (1230)
Q Consensus 787 t~ekp~~C~~~~C~k~F~~~~~L~~H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~~~~C~k~F~~~ 866 (1230)
..+++|.|.. |++.|.....|..|+++|+++++|.|.. |++.|.+...|..|+++|++++||.|.. |++.|.+.
T Consensus 13 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~ 86 (106)
T 2ee8_A 13 KTKKEFICKF--CGRHFTKSYNLLIHERTHTDERPYTCDI--CHKAFRRQDHLRDHRYIHSKEKPFKCQE--CGKGFCQS 86 (106)
T ss_dssp CCCCCCBCSS--SCCBCSSHHHHHHHHHHHCCSCCCBCSS--SCCBCSCHHHHHHHGGGSCCCCTTSCSS--SCCCCSSH
T ss_pred CCCcCeECCC--CCCccCCHHHHHHHHHHcCCCCCcCCCC--ccchhCCHHHHHHHHHHhCCCCCeECCC--cCCcccCH
Confidence 3445566655 6666666666666666666666666655 6666666666666666666666666653 66666666
Q ss_pred hhHhhhhccccCCCCcc
Q psy8969 867 SSLYKHTLVHSDIRPFI 883 (1230)
Q Consensus 867 ~~L~~H~~~H~~ekpy~ 883 (1230)
..|..|+++|++++||.
T Consensus 87 ~~L~~H~~~H~~~~~~~ 103 (106)
T 2ee8_A 87 RTLAVHKTLHMQTSSPT 103 (106)
T ss_dssp HHHHHHHHHTTSCCCCC
T ss_pred HHHHHHHHHhCCCCCCc
Confidence 66666666665555554
No 84
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=99.63 E-value=1.5e-16 Score=146.76 Aligned_cols=87 Identities=33% Similarity=0.803 Sum_probs=46.9
Q ss_pred CCceecCCCccCccccChhhHHHHHhhccCCCCccccccccccccCCchhHhhhhccccCCCCccCCCCCcccCChhhHH
Q psy8969 819 EKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRSYRQLCTLN 898 (1230)
Q Consensus 819 ekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~~~~C~k~F~~~~~L~~H~~~H~~ekpy~C~~Cgk~F~~~~~L~ 898 (1230)
++||.|....|++.|.+...|..|+++|++++||.|.. |++.|.+...|..|+++|++++||.|+.|++.|.+.+.|.
T Consensus 2 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~ 79 (90)
T 1a1h_A 2 ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRI--CMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERK 79 (90)
T ss_dssp -CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTT--TCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHH
T ss_pred CCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCC--CCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHH
Confidence 44555541125555555555555555555555555543 5555555555555555555555555555555555555555
Q ss_pred hHHhhhcCC
Q psy8969 899 VHKKTNHRE 907 (1230)
Q Consensus 899 ~H~k~hh~~ 907 (1230)
.|+++|+++
T Consensus 80 ~H~~~H~~~ 88 (90)
T 1a1h_A 80 RHTKIHLRQ 88 (90)
T ss_dssp HHHGGGGC-
T ss_pred HHHHHhccc
Confidence 555555543
No 85
>1hqc_A RUVB; extended AAA-ATPase domain, complex with nucleotide, hydrolase; HET: ADE; 3.20A {Thermus thermophilus} SCOP: a.4.5.11 c.37.1.20 PDB: 1ixs_B* 1ixr_C*
Probab=99.63 E-value=2.8e-15 Score=171.46 Aligned_cols=200 Identities=18% Similarity=0.288 Sum_probs=140.5
Q ss_pred ccccChHHHHHHHHHHHHHhhhcCCCCCceEEEeCCCCCCchHHHHHHHHHhCCCeEEEecCCcchhHHHhhcccccccc
Q psy8969 354 DDHYGMEDVKKRILEFIAVSQLKGTTQGKILCFYGPPGVGKTSIAKSIARALNREYFRFSVGGMSDVAEIKGHRRTYVGA 433 (1230)
Q Consensus 354 ~d~~G~~~vK~~i~e~l~~~~~~~~~~~~~llL~GPPG~GKTslak~iA~~l~~~~~~~~~~~~~d~~~i~g~~~~~~g~ 433 (1230)
++++|.+.+++.+.+++......+ ..+..++|+||||||||++|++||+.++.+|+.++...+....++
T Consensus 12 ~~~ig~~~~~~~l~~~l~~~~~~~-~~~~~vll~G~~GtGKT~la~~i~~~~~~~~~~~~~~~~~~~~~l---------- 80 (324)
T 1hqc_A 12 DEYIGQERLKQKLRVYLEAAKARK-EPLEHLLLFGPPGLGKTTLAHVIAHELGVNLRVTSGPAIEKPGDL---------- 80 (324)
T ss_dssp TTCCSCHHHHHHHHHHHHHHHHHC-SCCCCCEEECCTTCCCHHHHHHHHHHHTCCEEEECTTTCCSHHHH----------
T ss_pred HHhhCHHHHHHHHHHHHHHHHccC-CCCCcEEEECCCCCCHHHHHHHHHHHhCCCEEEEeccccCChHHH----------
Confidence 578999999999998886433222 234678999999999999999999999999998887665443333
Q ss_pred CchhHHHHHHhhcCCCCEEEEecccccCCCCCCChhhHHHhhcChhhhhhhhh---hccCccccCCceEEEEecCCCCCC
Q psy8969 434 MPGKVIQCMKKTKTENPLVLIDEVDKIGKGYSGDPASALLEMLDPEQNANFLD---HYLDVPVDLSRVLFICTANVIDTI 510 (1230)
Q Consensus 434 ~~g~i~~~~~~~~~~~pvillDEIDk~~~~~~~~~~~all~~ld~~q~~~f~d---~~~~~~~d~s~v~~I~TaN~~~~I 510 (1230)
...+..+.....+|||||||.+.. +....|+.+|+........+ ....+..+..++.+|+|||....+
T Consensus 81 -----~~~l~~~~~~~~~l~lDEi~~l~~----~~~~~L~~~l~~~~~~~v~~~~~~~~~~~~~~~~~~~i~~t~~~~~~ 151 (324)
T 1hqc_A 81 -----AAILANSLEEGDILFIDEIHRLSR----QAEEHLYPAMEDFVMDIVIGQGPAARTIRLELPRFTLIGATTRPGLI 151 (324)
T ss_dssp -----HHHHTTTCCTTCEEEETTTTSCCH----HHHHHHHHHHHHSEEEECCSSSSSCCCEEEECCCCEEEEEESCCSSC
T ss_pred -----HHHHHHhccCCCEEEEECCccccc----chHHHHHHHHHhhhhHHhccccccccccccCCCCEEEEEeCCCcccC
Confidence 223332234567999999998742 23556776665422110000 001122344578999999999999
Q ss_pred CHhhhccc-ceeecCCCCHHHHHHHHHHhhcchhHHhcCCCCCCcccCHHHHHHHHHHhhhhhhHHHHHHHHHHHH
Q psy8969 511 PEPLRDRM-EMIDVSGYVAEEKVAIAAQYLIPQAMKESGLSPEQITLEPSAIQVLIKNYCRESGVRNLQKHIEKVT 585 (1230)
Q Consensus 511 ~~~L~~R~-~~i~~~~~~~~e~~~i~~~~l~~~~~~~~gl~~~~i~~~~~~~~~li~~~~~e~gvR~l~~~i~~i~ 585 (1230)
+++|++|| .++.+..++.+|...++.+++ ... .+.++++++..+++. + .+.+|.+++.+..+.
T Consensus 152 ~~~l~~R~~~~i~l~~~~~~e~~~~l~~~~-----~~~-----~~~~~~~~~~~l~~~-~-~G~~r~l~~~l~~~~ 215 (324)
T 1hqc_A 152 TAPLLSRFGIVEHLEYYTPEELAQGVMRDA-----RLL-----GVRITEEAALEIGRR-S-RGTMRVAKRLFRRVR 215 (324)
T ss_dssp SCSTTTTCSCEEECCCCCHHHHHHHHHHHH-----HTT-----TCCCCHHHHHHHHHH-S-CSCHHHHHHHHHHHT
T ss_pred CHHHHhcccEEEecCCCCHHHHHHHHHHHH-----Hhc-----CCCCCHHHHHHHHHH-c-cCCHHHHHHHHHHHH
Confidence 99999999 489999999999888776654 222 345788998888755 4 567888877666543
No 86
>1d2n_A N-ethylmaleimide-sensitive fusion protein; hexamerization domain, ATPase, transport; HET: ANP; 1.75A {Cricetulus griseus} SCOP: c.37.1.20 PDB: 1nsf_A*
Probab=99.62 E-value=5.6e-16 Score=173.53 Aligned_cols=205 Identities=17% Similarity=0.190 Sum_probs=127.9
Q ss_pred hhhcccccChHHHHHHHHHH----HHHhhhcCCCCCceEEEeCCCCCCchHHHHHHHHHhCCCeEEEecCCcchhHHHhh
Q psy8969 350 KILDDDHYGMEDVKKRILEF----IAVSQLKGTTQGKILCFYGPPGVGKTSIAKSIARALNREYFRFSVGGMSDVAEIKG 425 (1230)
Q Consensus 350 ~~l~~d~~G~~~vK~~i~e~----l~~~~~~~~~~~~~llL~GPPG~GKTslak~iA~~l~~~~~~~~~~~~~d~~~i~g 425 (1230)
..+...++|....-+.++.. +......+...+..+||+||||||||++|++||+.++.+|+.++.++ .+.|
T Consensus 29 ~~~~~~~i~~~~~~~~i~~~~~~l~~~l~~~~~~~~~~vLl~G~~GtGKT~la~~ia~~~~~~~~~i~~~~-----~~~g 103 (272)
T 1d2n_A 29 SYIMNGIIKWGDPVTRVLDDGELLVQQTKNSDRTPLVSVLLEGPPHSGKTALAAKIAEESNFPFIKICSPD-----KMIG 103 (272)
T ss_dssp TTCTTCCCCCSHHHHHHHHHHHHHHHHHHHCSSCSEEEEEEECSTTSSHHHHHHHHHHHHTCSEEEEECGG-----GCTT
T ss_pred HHHhcCCCCccHHHHHHHHHHHHHHHHHhccCCCCCeEEEEECCCCCcHHHHHHHHHHHhCCCEEEEeCHH-----HhcC
Confidence 34556678887776666663 22222234456678999999999999999999999999999987542 1111
Q ss_pred ccccccccCchhHHHHHHhhcC-CCCEEEEecccccCCCCCCC--hhhHHHhhcChhhhhhhhhhccCccccCCceEEEE
Q psy8969 426 HRRTYVGAMPGKVIQCMKKTKT-ENPLVLIDEVDKIGKGYSGD--PASALLEMLDPEQNANFLDHYLDVPVDLSRVLFIC 502 (1230)
Q Consensus 426 ~~~~~~g~~~g~i~~~~~~~~~-~~pvillDEIDk~~~~~~~~--~~~all~~ld~~q~~~f~d~~~~~~~d~s~v~~I~ 502 (1230)
.. .++..+.+...|..+.. ...||||||||.+......+ ....+++.|.. +++ .......++++|+
T Consensus 104 ~~---~~~~~~~~~~~~~~~~~~~~~vl~iDEid~l~~~~~~~~~~~~~~l~~L~~-----~~~---~~~~~~~~~~ii~ 172 (272)
T 1d2n_A 104 FS---ETAKCQAMKKIFDDAYKSQLSCVVVDDIERLLDYVPIGPRFSNLVLQALLV-----LLK---KAPPQGRKLLIIG 172 (272)
T ss_dssp CC---HHHHHHHHHHHHHHHHTSSEEEEEECCHHHHTTCBTTTTBCCHHHHHHHHH-----HTT---CCCSTTCEEEEEE
T ss_pred Cc---hHHHHHHHHHHHHHHHhcCCcEEEEEChhhhhccCCCChhHHHHHHHHHHH-----Hhc---CccCCCCCEEEEE
Confidence 10 11112345555655543 35699999999985432211 12334443322 011 1112335788999
Q ss_pred ecCCCCCCCH-hhhcccc-eeecCCCCH-HHHHHHHHHhhcchhHHhcCCCCCCcccCHHHHHHHHHHhhh---hhhHHH
Q psy8969 503 TANVIDTIPE-PLRDRME-MIDVSGYVA-EEKVAIAAQYLIPQAMKESGLSPEQITLEPSAIQVLIKNYCR---ESGVRN 576 (1230)
Q Consensus 503 TaN~~~~I~~-~L~~R~~-~i~~~~~~~-~e~~~i~~~~l~~~~~~~~gl~~~~i~~~~~~~~~li~~~~~---e~gvR~ 576 (1230)
|||.++.+++ .+++||. .|.++++.. ++...++.+ . ..++++++..+++.... ..++|.
T Consensus 173 ttn~~~~l~~~~l~~rf~~~i~~p~l~~r~~i~~i~~~--------~-------~~~~~~~~~~l~~~~~g~~~~g~ir~ 237 (272)
T 1d2n_A 173 TTSRKDVLQEMEMLNAFSTTIHVPNIATGEQLLEALEL--------L-------GNFKDKERTTIAQQVKGKKVWIGIKK 237 (272)
T ss_dssp EESCHHHHHHTTCTTTSSEEEECCCEEEHHHHHHHHHH--------H-------TCSCHHHHHHHHHHHTTSEEEECHHH
T ss_pred ecCChhhcchhhhhcccceEEcCCCccHHHHHHHHHHh--------c-------CCCCHHHHHHHHHHhcCCCccccHHH
Confidence 9999988887 7889975 578888877 444444332 1 13467777777654322 447998
Q ss_pred HHHHHHHHH
Q psy8969 577 LQKHIEKVT 585 (1230)
Q Consensus 577 l~~~i~~i~ 585 (1230)
|...++...
T Consensus 238 l~~~l~~a~ 246 (272)
T 1d2n_A 238 LLMLIEMSL 246 (272)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHh
Confidence 877777643
No 87
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=99.62 E-value=5.7e-16 Score=144.71 Aligned_cols=87 Identities=38% Similarity=0.741 Sum_probs=44.1
Q ss_pred CCCCCCCCCCCCCCCccChhHHHhhhhcccCCCceecCCCccCccccChhhHHHHHhhccCCCCccccccccccccCCch
Q psy8969 788 SERPFPCPVLGCDRSFTTSNIRKVHIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYS 867 (1230)
Q Consensus 788 ~ekp~~C~~~~C~k~F~~~~~L~~H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~~~~C~k~F~~~~ 867 (1230)
++++|.|.+ |++.|.....|..|+++|+++++|.|.. |++.|.+...|..|++.|++++||.|.+ |++.|.+..
T Consensus 5 ~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~ 78 (96)
T 2dmd_A 5 SSGPHKCEV--CGKCFSRKDKLKTHMRCHTGVKPYKCKT--CDYAAADSSSLNKHLRIHSDERPFKCQI--CPYASRNSS 78 (96)
T ss_dssp CCCCCCBTT--TTBCCCCHHHHHHHGGGCCCCCSEECSS--SCCEESSHHHHHHHHHHSCCCCCEECSS--SSCEESSHH
T ss_pred CCcCeECCC--CCCccCCHHHHHHHHHhcCCCCCEeCCC--CCCccCCHHHHHHHHHHhCCCCCccCCC--CCCccCCHH
Confidence 344555544 5555555555555555555555555544 5555555555555555555555555543 555555555
Q ss_pred hHhhhhccccCCC
Q psy8969 868 SLYKHTLVHSDIR 880 (1230)
Q Consensus 868 ~L~~H~~~H~~ek 880 (1230)
.|..|+++|++++
T Consensus 79 ~l~~H~~~h~~~~ 91 (96)
T 2dmd_A 79 QLTVHLRSHTGDS 91 (96)
T ss_dssp HHHHHHTTCCSCC
T ss_pred HHHHHHHHhcCCC
Confidence 5555555554443
No 88
>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A
Probab=99.61 E-value=1.3e-16 Score=145.13 Aligned_cols=80 Identities=39% Similarity=0.616 Sum_probs=74.9
Q ss_pred CccC--CCCCCCCCCchhhhccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeecccc---cCccccchh
Q psy8969 1136 NNVC--PECKKTFSSAHHMKVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEF---CSKSFKTSG 1210 (1230)
Q Consensus 1136 py~C--~~CgK~F~s~s~Lk~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~~e~---CGKsF~~ks 1210 (1230)
||.| +.||+.|.+.+.|.+|+++|++++||+|+...|+++|.+.+.|.+|+++|++ |.| +. |++.|.+..
T Consensus 1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C--~~~~~C~~~f~~~~ 75 (85)
T 2j7j_A 1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPC--KKDDSCSFVGKTWT 75 (85)
T ss_dssp CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EEC--CSCSSCCCEESSHH
T ss_pred CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCC--CCCCCCCCccCCHH
Confidence 5899 9999999999999999999999999999522399999999999999999999 999 47 999999999
Q ss_pred hHHHHhhhcc
Q psy8969 1211 DLQKHVRTHT 1220 (1230)
Q Consensus 1211 ~LkrH~R~Ht 1220 (1230)
+|.+|+++||
T Consensus 76 ~l~~H~~~hh 85 (85)
T 2j7j_A 76 LYLKHVAECH 85 (85)
T ss_dssp HHHHHHHHCC
T ss_pred HHHHHHHhcC
Confidence 9999999986
No 89
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=99.60 E-value=2.4e-17 Score=152.26 Aligned_cols=83 Identities=23% Similarity=0.452 Sum_probs=77.7
Q ss_pred CCCccCCCCCCCCCCchhhhccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeecccccCccccchhhHH
Q psy8969 1134 SENNVCPECKKTFSSAHHMKVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQ 1213 (1230)
Q Consensus 1134 ~kpy~C~~CgK~F~s~s~Lk~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~~e~CGKsF~~ks~Lk 1213 (1230)
++||.|+.|++.|.+.++|.+|+++|++++||+|+ .|+++|.+.+.|.+|+++|++ .||.|. .|++.|.++.+|.
T Consensus 1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~~h~~-~~~~c~--~C~~~f~~~~~L~ 75 (88)
T 1llm_C 1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACD--ICGRKFARSDERKRHRDIQHI-LPILED--KVEELLSKNYHLE 75 (88)
T ss_dssp CCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECT--TTCCEESSHHHHHHHHHHHTH-HHHHHH--HHHHHHHHHHHHH
T ss_pred CCCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCC--CCCCccCCHHHHHHHHHHhCC-CcchHH--HHHHHHHHHhhhH
Confidence 47899999999999999999999999999999995 599999999999999999996 899995 7999999999999
Q ss_pred HHhhhccC
Q psy8969 1214 KHVRTHTD 1221 (1230)
Q Consensus 1214 rH~R~HtG 1221 (1230)
.|++.+++
T Consensus 76 ~H~~~~h~ 83 (88)
T 1llm_C 76 NEVARLKK 83 (88)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998763
No 90
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=99.60 E-value=7e-16 Score=148.14 Aligned_cols=88 Identities=31% Similarity=0.703 Sum_probs=83.6
Q ss_pred cccCCCceecCCCccCccccChhhHHHHHhhccCCCCccccccccccccCCchhHhhhhccccCCCCccCCCCCcccCCh
Q psy8969 815 THTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRSYRQL 894 (1230)
Q Consensus 815 ~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~~~~C~k~F~~~~~L~~H~~~H~~ekpy~C~~Cgk~F~~~ 894 (1230)
.|+++++|.| . |++.|.+...|..|++.|++++||.|.+ |++.|.+...|..|+++|+++++|.|..|++.|.+.
T Consensus 4 ~h~~~k~~~C-~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~ 78 (110)
T 2csh_A 4 GSSGDKLYPC-Q--CGKSFTHKSQRDRHMSMHLGLRPYGCGV--CGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWR 78 (110)
T ss_dssp CCCCCCCEEC-T--TSCEESSHHHHHHHHHHHSCCCSEECTT--TSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCH
T ss_pred CCCCCCCEec-c--CCCccCCHHHHHHHHHHcCCCcCccCCC--CCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCH
Confidence 6899999999 8 9999999999999999999999999986 999999999999999999999999999999999999
Q ss_pred hhHHhHHhhhcCC
Q psy8969 895 CTLNVHKKTNHRE 907 (1230)
Q Consensus 895 ~~L~~H~k~hh~~ 907 (1230)
..|..|++.|+..
T Consensus 79 ~~l~~H~~~~~~~ 91 (110)
T 2csh_A 79 DSFHRHVTSCTKS 91 (110)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHcccc
Confidence 9999999999853
No 91
>1g8p_A Magnesium-chelatase 38 kDa subunit; parallel beta sheet, P-loop, rossman fold, AAA+, photosynthesis, metal transport; 2.10A {Rhodobacter capsulatus} SCOP: c.37.1.20 PDB: 2x31_G
Probab=99.59 E-value=8.5e-15 Score=169.21 Aligned_cols=232 Identities=17% Similarity=0.228 Sum_probs=133.6
Q ss_pred ccccChHHHHHHHHHHHHHhhhcCCCCCceEEEeCCCCCCchHHHHHHHHHhCC--------------------------
Q psy8969 354 DDHYGMEDVKKRILEFIAVSQLKGTTQGKILCFYGPPGVGKTSIAKSIARALNR-------------------------- 407 (1230)
Q Consensus 354 ~d~~G~~~vK~~i~e~l~~~~~~~~~~~~~llL~GPPG~GKTslak~iA~~l~~-------------------------- 407 (1230)
++++|++++++.+...+. . ..+..+||+||||||||++|++||+.+++
T Consensus 24 ~~i~G~~~~~~~l~~~~~----~--~~~~~vLl~G~~GtGKT~la~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (350)
T 1g8p_A 24 SAIVGQEDMKLALLLTAV----D--PGIGGVLVFGDRGTGKSTAVRALAALLPEIEAVEGCPVSSPNVEMIPDWATVLST 97 (350)
T ss_dssp GGSCSCHHHHHHHHHHHH----C--GGGCCEEEECCGGGCTTHHHHHHHHHSCCEEEETTCTTCCSSGGGSCTTCCCSCC
T ss_pred hhccChHHHHHHHHHHhh----C--CCCceEEEECCCCccHHHHHHHHHHhCccccccccccccccccccccchhhhhcc
Confidence 468999998886543332 1 12234999999999999999999999974
Q ss_pred -------CeEEEecCCcchhHHHhhc---cccccc----cCchhHHHHHHhhcCCCCEEEEecccccCCCCCCChhhHHH
Q psy8969 408 -------EYFRFSVGGMSDVAEIKGH---RRTYVG----AMPGKVIQCMKKTKTENPLVLIDEVDKIGKGYSGDPASALL 473 (1230)
Q Consensus 408 -------~~~~~~~~~~~d~~~i~g~---~~~~~g----~~~g~i~~~~~~~~~~~pvillDEIDk~~~~~~~~~~~all 473 (1230)
+|+.+..+ .. ..++.|. ...+.+ ..+|.+.. ..+.||||||||++.. +..++|+
T Consensus 98 ~~~~~~~~~~~~~~~-~~-~~~l~g~~~~~~~~~~~~~~~~~g~~~~------a~~~vl~iDEi~~l~~----~~~~~Ll 165 (350)
T 1g8p_A 98 NVIRKPTPVVDLPLG-VS-EDRVVGALDIERAISKGEKAFEPGLLAR------ANRGYLYIDECNLLED----HIVDLLL 165 (350)
T ss_dssp CEEEECCCEEEECTT-CC-HHHHHCEECHHHHHHHCGGGEECCHHHH------HTTEEEEETTGGGSCH----HHHHHHH
T ss_pred ccccCCCcccccCCC-cc-hhhheeechhhhhhcCCceeecCceeee------cCCCEEEEeChhhCCH----HHHHHHH
Confidence 22222211 11 1222222 000000 01232211 1356999999999843 3567788
Q ss_pred hhcChhhhhhhhhhccCccccCCceEEEEecCCCC-CCCHhhhcccce-eecCCCC-HHHHHHHHHHhhc----------
Q psy8969 474 EMLDPEQNANFLDHYLDVPVDLSRVLFICTANVID-TIPEPLRDRMEM-IDVSGYV-AEEKVAIAAQYLI---------- 540 (1230)
Q Consensus 474 ~~ld~~q~~~f~d~~~~~~~d~s~v~~I~TaN~~~-~I~~~L~~R~~~-i~~~~~~-~~e~~~i~~~~l~---------- 540 (1230)
++|+.... .+...-...... .++++|+|+|+.+ .++++|++||.+ +.+..++ .++...|+...+-
T Consensus 166 ~~le~~~~-~~~~~g~~~~~~-~~~~li~~~n~~~~~l~~~L~~R~~~~~~l~~~~~~~~~~~il~~~~~~~~~~~~~~~ 243 (350)
T 1g8p_A 166 DVAQSGEN-VVERDGLSIRHP-ARFVLVGSGNPEEGDLRPQLLDRFGLSVEVLSPRDVETRVEVIRRRDTYDADPKAFLE 243 (350)
T ss_dssp HHHHHSEE-EECCTTCCEEEE-CCEEEEEEECSCSCCCCHHHHTTCSEEEECCCCCSHHHHHHHHHHHHHHHHCHHHHHH
T ss_pred HHHhcCce-EEEecceEEeeC-CceEEEEEeCCCCCCCCHHHHhhcceEEEcCCCCcHHHHHHHHHHHHhcccCchhhcc
Confidence 77764211 111110111111 3789999999855 899999999987 8888884 5566577755211
Q ss_pred ----------chhHHhcCCCCCCcccCHHHHHHHHHHhhhhh--hHHHHHHHHHHHHHHHHHHHhhcCCCceEechhhhh
Q psy8969 541 ----------PQAMKESGLSPEQITLEPSAIQVLIKNYCRES--GVRNLQKHIEKVTRKVALTIVKKESDKVTVTNDNLS 608 (1230)
Q Consensus 541 ----------~~~~~~~gl~~~~i~~~~~~~~~li~~~~~e~--gvR~l~~~i~~i~r~~~~~~~~~~~~~~~i~~~~~~ 608 (1230)
.++.... -....+.++++++..|.+.+.... ++|.+.+.+..+...+. ..+ .-.|+.+++.
T Consensus 244 ~~~~~~~~~~~~i~~~~-~~~~~~~ls~~~~~~l~~~~~~~~~~~~R~~~~ll~~a~~~A~---~~~---~~~v~~~~v~ 316 (350)
T 1g8p_A 244 EWRPKDMDIRNQILEAR-ERLPKVEAPNTALYDCAALCIALGSDGLRGELTLLRSARALAA---LEG---ATAVGRDHLK 316 (350)
T ss_dssp HHHHHHHHHHHHHHHHH-HHGGGCBCCHHHHHHHHHHHHHSSSCSHHHHHHHHHHHHHHHH---HTT---CSBCCHHHHH
T ss_pred ccccchHHHHHHHHHHH-HhCCCCCCCHHHHHHHHHHHHHhCCCCccHHHHHHHHHHHHHH---HcC---CCcCCHHHHH
Confidence 0010000 012356899999999887665433 46887766665433221 112 1247777776
Q ss_pred hhcC
Q psy8969 609 DFVG 612 (1230)
Q Consensus 609 ~~~~ 612 (1230)
+.+.
T Consensus 317 ~a~~ 320 (350)
T 1g8p_A 317 RVAT 320 (350)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6543
No 92
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=99.59 E-value=7.8e-16 Score=138.32 Aligned_cols=67 Identities=36% Similarity=0.640 Sum_probs=57.4
Q ss_pred cccCCCCCccCCCCCCCCCCchhhhccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEee
Q psy8969 1129 KKSTSSENNVCPECKKTFSSAHHMKVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 1197 (1230)
Q Consensus 1129 ~~~t~~kpy~C~~CgK~F~s~s~Lk~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C 1197 (1230)
..+.++++|.|+.|++.|.+.+.|.+|+++|++++||+|+ .|++.|.++..|.+|+++|+|++||+|
T Consensus 11 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~L~~H~~~H~~~~p~~C 77 (77)
T 2cot_A 11 WQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCD--ECGKAFIQRSHLIGHHRVHTGSGPSSG 77 (77)
T ss_dssp SCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECS--SSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred CcCCCCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCC--CCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence 3456778889999999998888999998889888899995 599999998999999988998888887
No 93
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=99.59 E-value=6.6e-16 Score=139.61 Aligned_cols=82 Identities=34% Similarity=0.747 Sum_probs=62.0
Q ss_pred ceecCCCccCccccChhhHHHHHhhccCCCCccccccccccccCCchhHhhhhccccCCCCccCCCCCcccCChhhHHhH
Q psy8969 821 PYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRSYRQLCTLNVH 900 (1230)
Q Consensus 821 py~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~~~~C~k~F~~~~~L~~H~~~H~~ekpy~C~~Cgk~F~~~~~L~~H 900 (1230)
||.|.. |++.|.+...|..|++.|++++||.|.. |++.|.+...|..|+++|++++||.|+.|++.|.+.+.|..|
T Consensus 1 ~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H 76 (82)
T 2kmk_A 1 SFDCKI--CGKSFKRSSTLSTHLLIHSDTRPYPCQY--CGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITH 76 (82)
T ss_dssp CEECSS--SCCEESSHHHHHHHHHHHHTCCCEECSS--SCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHH
T ss_pred CccCCC--CcccccCchhHHHHHHHcCCCCCeeCCc--CChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHH
Confidence 577777 7777777777777777777777777764 777777777777777777777777777777777777777777
Q ss_pred HhhhcC
Q psy8969 901 KKTNHR 906 (1230)
Q Consensus 901 ~k~hh~ 906 (1230)
+++|++
T Consensus 77 ~~~H~g 82 (82)
T 2kmk_A 77 SRKHTG 82 (82)
T ss_dssp HHHHC-
T ss_pred HHhhCC
Confidence 777753
No 94
>2qby_B CDC6 homolog 3, cell division control protein 6 homolog 3; winged-helix domain, helix-turn-helix, AAA+ ATPase domain, protein-DNA complex; HET: DNA SPD ADP; 3.35A {Sulfolobus solfataricus}
Probab=99.58 E-value=1.9e-14 Score=168.40 Aligned_cols=222 Identities=17% Similarity=0.190 Sum_probs=146.6
Q ss_pred ccccChHHHHHHHHHHHHHhhhcCCCCCceEEEeCCCCCCchHHHHHHHHHh-----------CCCeEEEecCCcc-hh-
Q psy8969 354 DDHYGMEDVKKRILEFIAVSQLKGTTQGKILCFYGPPGVGKTSIAKSIARAL-----------NREYFRFSVGGMS-DV- 420 (1230)
Q Consensus 354 ~d~~G~~~vK~~i~e~l~~~~~~~~~~~~~llL~GPPG~GKTslak~iA~~l-----------~~~~~~~~~~~~~-d~- 420 (1230)
++++|.++..+.|.+++.... .+ ..+..++|+||||||||++|+++|+.+ +.+++.+++.... +.
T Consensus 20 ~~l~gr~~~~~~l~~~l~~~~-~~-~~~~~vll~G~~G~GKT~la~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 97 (384)
T 2qby_B 20 KEIPFREDILRDAAIAIRYFV-KN-EVKFSNLFLGLTGTGKTFVSKYIFNEIEEVKKEDEEYKDVKQAYVNCREVGGTPQ 97 (384)
T ss_dssp SSCTTCHHHHHHHHHHHHHHH-TT-CCCCEEEEEECTTSSHHHHHHHHHHHHHHHHHHSSSSTTCEEEEEEHHHHCSCHH
T ss_pred CCCCChHHHHHHHHHHHHHHH-cC-CCCCcEEEECCCCCCHHHHHHHHHHHHHHHhhhhcCCCCceEEEEECccCCCCHH
Confidence 789999999999999885322 22 345689999999999999999999998 8899998865443 21
Q ss_pred -------HHHhhccccccccCchhHHHHHHhh-cCCCCEEEEecccccCCCCCCChhhH-HHhhcChhhhhhhhhhccCc
Q psy8969 421 -------AEIKGHRRTYVGAMPGKVIQCMKKT-KTENPLVLIDEVDKIGKGYSGDPASA-LLEMLDPEQNANFLDHYLDV 491 (1230)
Q Consensus 421 -------~~i~g~~~~~~g~~~g~i~~~~~~~-~~~~pvillDEIDk~~~~~~~~~~~a-ll~~ld~~q~~~f~d~~~~~ 491 (1230)
..+.|....+.|.....+...+... ....+||+|||||.+..... ... +..+++ .
T Consensus 98 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~vlilDEi~~l~~~~~---~~~~l~~l~~-------------~ 161 (384)
T 2qby_B 98 AVLSSLAGKLTGFSVPKHGINLGEYIDKIKNGTRNIRAIIYLDEVDTLVKRRG---GDIVLYQLLR-------------S 161 (384)
T ss_dssp HHHHHHHHHHHCSCCCSSSSCTHHHHHHHHHHHSSSCEEEEEETTHHHHHSTT---SHHHHHHHHT-------------S
T ss_pred HHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHhccCCCEEEEECHHHhccCCC---CceeHHHHhc-------------C
Confidence 1222333333444445555544433 33334999999999853211 122 222221 1
Q ss_pred cccCCceEEEEecCCC---CCCCHhhhccc-ceeecCCCCHHHHHHHHHHhhcchhHHhcCCCCCCcccCHHHHHHHHHH
Q psy8969 492 PVDLSRVLFICTANVI---DTIPEPLRDRM-EMIDVSGYVAEEKVAIAAQYLIPQAMKESGLSPEQITLEPSAIQVLIKN 567 (1230)
Q Consensus 492 ~~d~s~v~~I~TaN~~---~~I~~~L~~R~-~~i~~~~~~~~e~~~i~~~~l~~~~~~~~gl~~~~i~~~~~~~~~li~~ 567 (1230)
. .++.||+|+|.. +.+++++++|| .+|.+++|+.++...|+..++- .++. ...++++++..+.+.
T Consensus 162 ~---~~~~iI~~t~~~~~~~~l~~~l~sr~~~~i~l~~l~~~~~~~il~~~~~------~~~~--~~~~~~~~~~~i~~~ 230 (384)
T 2qby_B 162 D---ANISVIMISNDINVRDYMEPRVLSSLGPSVIFKPYDAEQLKFILSKYAE------YGLI--KGTYDDEILSYIAAI 230 (384)
T ss_dssp S---SCEEEEEECSSTTTTTTSCHHHHHTCCCEEEECCCCHHHHHHHHHHHHH------HTSC--TTSCCSHHHHHHHHH
T ss_pred C---cceEEEEEECCCchHhhhCHHHHhcCCCeEEECCCCHHHHHHHHHHHHH------hhcc--cCCcCHHHHHHHHHH
Confidence 1 689999999987 78999999997 5899999999999999887652 1222 345778888877765
Q ss_pred hhhh-hhHHHHHHHHHHHHHHHHHHHhhcCCCceEechhhhhhhcC
Q psy8969 568 YCRE-SGVRNLQKHIEKVTRKVALTIVKKESDKVTVTNDNLSDFVG 612 (1230)
Q Consensus 568 ~~~e-~gvR~l~~~i~~i~r~~~~~~~~~~~~~~~i~~~~~~~~~~ 612 (1230)
.... +.+|.+...+..+... .. ....|+.+++.+.+.
T Consensus 231 ~~~~~G~~r~a~~~l~~a~~~-----a~---~~~~i~~~~v~~~~~ 268 (384)
T 2qby_B 231 SAKEHGDARKAVNLLFRAAQL-----AS---GGGIIRKEHVDKAIV 268 (384)
T ss_dssp HHTTCCCHHHHHHHHHHHHHH-----TT---SSSCCCHHHHHHHHH
T ss_pred HHhccCCHHHHHHHHHHHHHH-----hc---CCCccCHHHHHHHHH
Confidence 4322 5577766655554322 21 122467777665543
No 95
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=99.58 E-value=9.6e-16 Score=146.67 Aligned_cols=90 Identities=20% Similarity=0.382 Sum_probs=54.4
Q ss_pred cCCCCCCCCCCCCCCCCccChhHHHhhhhcccCCCceecCCCccCccccChhhHHHHHhhccCCCCccccccccccccCC
Q psy8969 786 HTSERPFPCPVLGCDRSFTTSNIRKVHIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTE 865 (1230)
Q Consensus 786 ht~ekp~~C~~~~C~k~F~~~~~L~~H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~~~~C~k~F~~ 865 (1230)
|+++++|.|.+ |++.|.....|..|+++| .++|.|.. |++.|.....|..|++ |++++||.|.+ |++.|.+
T Consensus 11 h~~~~~~~C~~--C~~~f~~~~~l~~H~~~H--~~~~~C~~--C~~~f~~~~~l~~H~~-H~~~~~~~C~~--C~~~f~~ 81 (107)
T 1wjp_A 11 VENKEVYQCRL--CNAKLSSLLEQGSHERLC--RNAAVCPY--CSLRFFSPELKQEHES-KCEYKKLTCLE--CMRTFKS 81 (107)
T ss_dssp CCCCCCCBCTT--TCCBCSSHHHHHHHHHHH--HHSBCCTT--TCCCBSSHHHHHHHHH-HCSTGGGEEGG--GTEECSS
T ss_pred cCCCcCeECCC--CCCccCCHHHHHHHHHHC--CCCccCCC--CCCccCCHHHHHHHHH-cCCCCCccCcc--ccchhCC
Confidence 45556666655 666666666666666665 25566655 6666666666666664 66666666653 6666666
Q ss_pred chhHhhhhc-cccCCCCccC
Q psy8969 866 YSSLYKHTL-VHSDIRPFIC 884 (1230)
Q Consensus 866 ~~~L~~H~~-~H~~ekpy~C 884 (1230)
...|..|++ +|++++||.|
T Consensus 82 ~~~L~~H~~~~H~~~~~~~~ 101 (107)
T 1wjp_A 82 SFSIWRHQVEVHNQNNMAPT 101 (107)
T ss_dssp HHHHHHHHHHTSCCCCCCCC
T ss_pred HHHHHHHHHHHcCCCCCCCC
Confidence 666666664 5666666655
No 96
>3f9v_A Minichromosome maintenance protein MCM; replicative helicase, DNA replication, MCM complex, AAA+ Pro ATP-binding, DNA-binding, helicase; 4.35A {Sulfolobus solfataricus}
Probab=99.58 E-value=5.2e-16 Score=192.25 Aligned_cols=245 Identities=15% Similarity=0.228 Sum_probs=143.0
Q ss_pred HHHhhhhcccccChHHHHHHHHHHHHHhhhc-----CCCCCceEEEeCCCCCCchHHHHHHHHHhCCCeEEEe----cCC
Q psy8969 346 TQAAKILDDDHYGMEDVKKRILEFIAVSQLK-----GTTQGKILCFYGPPGVGKTSIAKSIARALNREYFRFS----VGG 416 (1230)
Q Consensus 346 ~~~~~~l~~d~~G~~~vK~~i~e~l~~~~~~-----~~~~~~~llL~GPPG~GKTslak~iA~~l~~~~~~~~----~~~ 416 (1230)
....+.|...++|++++|+.|+-.+...... .......+||+||||||||+||++||+.+++.++... .+|
T Consensus 287 ~~l~~~l~~~I~G~e~vk~al~~~l~~g~~~~~~~~~~r~~~~vLL~GppGtGKT~LAr~la~~~~r~~~~~~~~~~~~~ 366 (595)
T 3f9v_A 287 DRIISSIAPSIYGHWELKEALALALFGGVPKVLEDTRIRGDIHILIIGDPGTAKSQMLQFISRVAPRAVYTTGKGSTAAG 366 (595)
T ss_dssp GTHHHHTSSTTSCCHHHHHHHTTTTTCCCCEETTTTEECCSCCEEEEESSCCTHHHHHHSSSTTCSCEECCCTTCSTTTT
T ss_pred HHHHHhhcchhcChHHHHHHHHHHHhCCCcccccCCCcCCCcceEEECCCchHHHHHHHHHHHhCCCceecCCCcccccc
Confidence 3444557789999999999886544211000 0011126999999999999999999999998776532 122
Q ss_pred cchhHHHhhccccccccCchhHHHHHHhhcCCCCEEEEecccccCCCCCCChhhHHHhhcChhhhhhhhhhccCccc-cC
Q psy8969 417 MSDVAEIKGHRRTYVGAMPGKVIQCMKKTKTENPLVLIDEVDKIGKGYSGDPASALLEMLDPEQNANFLDHYLDVPV-DL 495 (1230)
Q Consensus 417 ~~d~~~i~g~~~~~~g~~~g~i~~~~~~~~~~~pvillDEIDk~~~~~~~~~~~all~~ld~~q~~~f~d~~~~~~~-d~ 495 (1230)
+... .+.+.........+|.+..+ .+.|+||||||++.. +..++|+++|+..... ++. .+... -.
T Consensus 367 l~~~-~~~~~~~g~~~~~~G~l~~A------~~gil~IDEid~l~~----~~q~~Ll~~le~~~i~--i~~-~g~~~~~~ 432 (595)
T 3f9v_A 367 LTAA-VVREKGTGEYYLEAGALVLA------DGGIAVIDEIDKMRD----EDRVAIHEAMEQQTVS--IAK-AGIVAKLN 432 (595)
T ss_dssp SEEE-CSSGGGTSSCSEEECHHHHH------SSSEECCTTTTCCCS----HHHHHHHHHHHSSSEE--EES-SSSEEEEC
T ss_pred ccce-eeeccccccccccCCeeEec------CCCcEEeehhhhCCH----hHhhhhHHHHhCCEEE--Eec-CCcEEEec
Confidence 2210 00000000111124544322 457999999999843 4578899998643211 010 01111 12
Q ss_pred CceEEEEecCCCC-------------CCCHhhhcccc-eeecCCCCHHHHHHHHHHhhcchhH---HhcCCCCCCc----
Q psy8969 496 SRVLFICTANVID-------------TIPEPLRDRME-MIDVSGYVAEEKVAIAAQYLIPQAM---KESGLSPEQI---- 554 (1230)
Q Consensus 496 s~v~~I~TaN~~~-------------~I~~~L~~R~~-~i~~~~~~~~e~~~i~~~~l~~~~~---~~~gl~~~~i---- 554 (1230)
.++.+|+|||+.. .|++||+|||+ ++.+.+++.++...|+ ++++.... ....++.+.+
T Consensus 433 ~~~~vIaatNp~~G~~~~~~~~~~ni~l~~aLl~RFDl~~~~~~~~~~e~~~i~-~~il~~~~~~~~~~~l~~~~l~~~i 511 (595)
T 3f9v_A 433 ARAAVIAAGNPKFGRYISERPVSDNINLPPTILSRFDLIFILKDQPGEQDRELA-NYILDVHSGKSTKNIIDIDTLRKYI 511 (595)
T ss_dssp CCCEEEEEECCTTCCSCTTSCSCTTTCSCSSSGGGCSCCEEECCTTHHHHHHHH-HHHHTTTCCCSSSSTTCCTTTHHHH
T ss_pred CceEEEEEcCCcCCccCcccCchhccCCCHHHHhhCeEEEEeCCCCCHHHHHHH-HHHHHHhhccccccCCCHHHHHHHH
Confidence 5789999999987 89999999997 5677888887744444 33332111 0112222222
Q ss_pred ---------ccCHHHHHHHHHHhh-------------hhhhHHHHHHHHHHHHHHHHHHHhhcCCCceEechhhhhhhc
Q psy8969 555 ---------TLEPSAIQVLIKNYC-------------RESGVRNLQKHIEKVTRKVALTIVKKESDKVTVTNDNLSDFV 611 (1230)
Q Consensus 555 ---------~~~~~~~~~li~~~~-------------~e~gvR~l~~~i~~i~r~~~~~~~~~~~~~~~i~~~~~~~~~ 611 (1230)
.+++++...|.+.|. ....+|.|++.+..... .|. +.. .-.|+.+++.+.+
T Consensus 512 ~~ar~~~~p~ls~ea~~~l~~~y~~lR~~~~~~~~~~~~~s~R~l~~lirla~a-~A~--l~~---~~~V~~~dv~~Ai 584 (595)
T 3f9v_A 512 AYARKYVTPKITSEAKNLITDFFVEMRKKSSETPDSPILITPRQLEALIRISEA-YAK--MAL---KAEVTREDAERAI 584 (595)
T ss_dssp HHHHHHHCCCCCCCTHHHHHHHHTTSSCSCCBCSSSCBCSSTTTTTHHHHHHHH-HHH--TTS---SCCSSHHHHHHHH
T ss_pred HHHHHhCCCCCCHHHHHHHHHHHHHHHHhhccCCCccccccHHHHHHHHHHHHH-HHH--HhC---cCCCCHHHHHHHH
Confidence 566777777777764 35677887766554221 121 111 2247777776543
No 97
>1iqp_A RFCS; clamp loader, extended AAA-ATPase domain, complex with ADP, replication; HET: ADP; 2.80A {Pyrococcus furiosus} SCOP: a.80.1.1 c.37.1.20
Probab=99.58 E-value=1.3e-14 Score=165.69 Aligned_cols=200 Identities=24% Similarity=0.369 Sum_probs=137.7
Q ss_pred ccccChHHHHHHHHHHHHHhhhcCCCCCceEEEeCCCCCCchHHHHHHHHHhCC-----CeEEEecCCcchhHHHhhccc
Q psy8969 354 DDHYGMEDVKKRILEFIAVSQLKGTTQGKILCFYGPPGVGKTSIAKSIARALNR-----EYFRFSVGGMSDVAEIKGHRR 428 (1230)
Q Consensus 354 ~d~~G~~~vK~~i~e~l~~~~~~~~~~~~~llL~GPPG~GKTslak~iA~~l~~-----~~~~~~~~~~~d~~~i~g~~~ 428 (1230)
++++|++++++.+..++... ..+.++|+||||+|||++|+++|+.++. .++.++.++......++
T Consensus 25 ~~~~g~~~~~~~l~~~l~~~------~~~~~ll~G~~G~GKT~la~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~---- 94 (327)
T 1iqp_A 25 DDIVGQEHIVKRLKHYVKTG------SMPHLLFAGPPGVGKTTAALALARELFGENWRHNFLELNASDERGINVIR---- 94 (327)
T ss_dssp TTCCSCHHHHHHHHHHHHHT------CCCEEEEESCTTSSHHHHHHHHHHHHHGGGHHHHEEEEETTCHHHHHTTH----
T ss_pred HHhhCCHHHHHHHHHHHHcC------CCCeEEEECcCCCCHHHHHHHHHHHhcCCcccCceEEeeccccCchHHHH----
Confidence 56999999999999887531 3345999999999999999999999743 35666544322211111
Q ss_pred cccccCchhHHHHHHhh----cCCCCEEEEecccccCCCCCCChhhHHHhhcChhhhhhhhhhccCccccCCceEEEEec
Q psy8969 429 TYVGAMPGKVIQCMKKT----KTENPLVLIDEVDKIGKGYSGDPASALLEMLDPEQNANFLDHYLDVPVDLSRVLFICTA 504 (1230)
Q Consensus 429 ~~~g~~~g~i~~~~~~~----~~~~pvillDEIDk~~~~~~~~~~~all~~ld~~q~~~f~d~~~~~~~d~s~v~~I~Ta 504 (1230)
..+ ..+... .....||+|||+|.+.. +..++|+..++.. ..++.||+|+
T Consensus 95 -------~~~-~~~~~~~~~~~~~~~vliiDe~~~l~~----~~~~~L~~~le~~---------------~~~~~~i~~~ 147 (327)
T 1iqp_A 95 -------EKV-KEFARTKPIGGASFKIIFLDEADALTQ----DAQQALRRTMEMF---------------SSNVRFILSC 147 (327)
T ss_dssp -------HHH-HHHHHSCCGGGCSCEEEEEETGGGSCH----HHHHHHHHHHHHT---------------TTTEEEEEEE
T ss_pred -------HHH-HHHHhhCCcCCCCCeEEEEeCCCcCCH----HHHHHHHHHHHhc---------------CCCCeEEEEe
Confidence 111 111111 12356999999999843 3456676666431 2467889999
Q ss_pred CCCCCCCHhhhcccceeecCCCCHHHHHHHHHHhhcchhHHhcCCCCCCcccCHHHHHHHHHHhhhhhhHHHHHHHHHHH
Q psy8969 505 NVIDTIPEPLRDRMEMIDVSGYVAEEKVAIAAQYLIPQAMKESGLSPEQITLEPSAIQVLIKNYCRESGVRNLQKHIEKV 584 (1230)
Q Consensus 505 N~~~~I~~~L~~R~~~i~~~~~~~~e~~~i~~~~l~~~~~~~~gl~~~~i~~~~~~~~~li~~~~~e~gvR~l~~~i~~i 584 (1230)
|..+.++++|++|+.++.+.+++.++...++...+ .. ..+.++++++..+++. + ++++|.+...++.+
T Consensus 148 ~~~~~l~~~l~sr~~~~~~~~l~~~~~~~~l~~~~-----~~-----~~~~~~~~~~~~l~~~-~-~g~~r~~~~~l~~~ 215 (327)
T 1iqp_A 148 NYSSKIIEPIQSRCAIFRFRPLRDEDIAKRLRYIA-----EN-----EGLELTEEGLQAILYI-A-EGDMRRAINILQAA 215 (327)
T ss_dssp SCGGGSCHHHHHTEEEEECCCCCHHHHHHHHHHHH-----HT-----TTCEECHHHHHHHHHH-H-TTCHHHHHHHHHHH
T ss_pred CCccccCHHHHhhCcEEEecCCCHHHHHHHHHHHH-----Hh-----cCCCCCHHHHHHHHHH-C-CCCHHHHHHHHHHH
Confidence 99999999999999999999999999888776644 22 2456899999988864 2 67788877766543
Q ss_pred HHHHHHHHhhcCCCceEechhhhhhhcCC
Q psy8969 585 TRKVALTIVKKESDKVTVTNDNLSDFVGK 613 (1230)
Q Consensus 585 ~r~~~~~~~~~~~~~~~i~~~~~~~~~~~ 613 (1230)
.. .. -.|+.+.+.+.++.
T Consensus 216 ~~-------~~----~~i~~~~v~~~~~~ 233 (327)
T 1iqp_A 216 AA-------LD----KKITDENVFMVASR 233 (327)
T ss_dssp HT-------TC----SEECHHHHHHHTTC
T ss_pred Hh-------cC----CCCCHHHHHHHHCC
Confidence 21 01 15777777776653
No 98
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=99.57 E-value=4e-16 Score=140.49 Aligned_cols=74 Identities=26% Similarity=0.546 Sum_probs=67.8
Q ss_pred CCCCCccCCC--CCCCCCCchhhhcccc-ccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeecccccCcccc
Q psy8969 1132 TSSENNVCPE--CKKTFSSAHHMKVHLR-IHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFK 1207 (1230)
Q Consensus 1132 t~~kpy~C~~--CgK~F~s~s~Lk~H~R-~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~~e~CGKsF~ 1207 (1230)
+++++|.|.. |++.|.+.++|.+|++ .|++++||+|++..|+++|.+++.|++|+++|++++||.|. +||++|+
T Consensus 3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~--~C~k~F~ 79 (79)
T 2dlk_A 3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE--FSGPSSG 79 (79)
T ss_dssp SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC--SSSCCCC
T ss_pred CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCC--CCCCCCC
Confidence 5678999987 9999999999999999 89999999995223999999999999999999999999994 7999995
No 99
>2bjv_A PSP operon transcriptional activator; AAA, transcription activation, gene regulation, sigma54 activator, enhancer binding protein, PSPF; 1.7A {Escherichia coli} PDB: 2bjw_A 2c96_A* 2c98_A* 2c99_A* 2c9c_A* 2vii_A*
Probab=99.57 E-value=9.5e-15 Score=162.78 Aligned_cols=212 Identities=18% Similarity=0.280 Sum_probs=135.8
Q ss_pred ccccChHHHHHHHHHHHHHhhhcCCCCCceEEEeCCCCCCchHHHHHHHHHhC---CCeEEEecCCcch---hHHHhhcc
Q psy8969 354 DDHYGMEDVKKRILEFIAVSQLKGTTQGKILCFYGPPGVGKTSIAKSIARALN---REYFRFSVGGMSD---VAEIKGHR 427 (1230)
Q Consensus 354 ~d~~G~~~vK~~i~e~l~~~~~~~~~~~~~llL~GPPG~GKTslak~iA~~l~---~~~~~~~~~~~~d---~~~i~g~~ 427 (1230)
++++|.....+++++.+..... .+..++|+||||||||++|++|+..++ .+|+.++++.+.+ .+++.|+.
T Consensus 6 ~~~ig~~~~~~~~~~~~~~~~~----~~~~vll~G~~GtGKt~la~~i~~~~~~~~~~~~~v~~~~~~~~~~~~~l~g~~ 81 (265)
T 2bjv_A 6 DNLLGEANSFLEVLEQVSHLAP----LDKPVLIIGERGTGKELIASRLHYLSSRWQGPFISLNCAALNENLLDSELFGHE 81 (265)
T ss_dssp ----CCCHHHHHHHHHHHHHTT----SCSCEEEECCTTSCHHHHHHHHHHTSTTTTSCEEEEEGGGSCHHHHHHHHHCCC
T ss_pred ccceeCCHHHHHHHHHHHHHhC----CCCCEEEECCCCCcHHHHHHHHHHhcCccCCCeEEEecCCCChhHHHHHhcCCc
Confidence 3478999998888877743221 235788999999999999999999986 6899999887754 22344433
Q ss_pred c-cccccC---chhHHHHHHhhcCCCCEEEEecccccCCCCCCChhhHHHhhcChhhhhhhhhhccCccccCCceEEEEe
Q psy8969 428 R-TYVGAM---PGKVIQCMKKTKTENPLVLIDEVDKIGKGYSGDPASALLEMLDPEQNANFLDHYLDVPVDLSRVLFICT 503 (1230)
Q Consensus 428 ~-~~~g~~---~g~i~~~~~~~~~~~pvillDEIDk~~~~~~~~~~~all~~ld~~q~~~f~d~~~~~~~d~s~v~~I~T 503 (1230)
+ .|.|+. +|.+ .. ..+.+|||||||.+.. +....|+.+|+..+ |.+. -+......++.+|+|
T Consensus 82 ~~~~~g~~~~~~~~l----~~--a~~~~l~lDEi~~l~~----~~q~~Ll~~l~~~~---~~~~-g~~~~~~~~~~iI~a 147 (265)
T 2bjv_A 82 AGAFTGAQKRHPGRF----ER--ADGGTLFLDELATAPM----MVQEKLLRVIEYGE---LERV-GGSQPLQVNVRLVCA 147 (265)
T ss_dssp ---------CCCCHH----HH--TTTSEEEEESGGGSCH----HHHHHHHHHHHHCE---ECCC-CC--CEECCCEEEEE
T ss_pred ccccccccccccchh----hh--cCCcEEEEechHhcCH----HHHHHHHHHHHhCC---eecC-CCcccccCCeEEEEe
Confidence 2 223322 2222 22 2357999999999853 34667777776421 1110 000111246789999
Q ss_pred cCCC-------CCCCHhhhcccce--eecCCCCH--HHHHHHHHHhhcchhHHhcCCCCCCcccCHHHHHHHHHHhhhhh
Q psy8969 504 ANVI-------DTIPEPLRDRMEM--IDVSGYVA--EEKVAIAAQYLIPQAMKESGLSPEQITLEPSAIQVLIKNYCRES 572 (1230)
Q Consensus 504 aN~~-------~~I~~~L~~R~~~--i~~~~~~~--~e~~~i~~~~l~~~~~~~~gl~~~~i~~~~~~~~~li~~~~~e~ 572 (1230)
+|.. ..+.++|++||.. |.++++.. ++...++..++ .+...+.|... ...++++++..+.. |...+
T Consensus 148 tn~~~~~~~~~~~~~~~L~~Rl~~~~i~lp~L~~R~~di~~l~~~~l-~~~~~~~~~~~-~~~~~~~a~~~L~~-~~~~g 224 (265)
T 2bjv_A 148 TNADLPAMVNEGTFRADLLDALAFDVVQLPPLRERESDIMLMAEYFA-IQMCREIKLPL-FPGFTERARETLLN-YRWPG 224 (265)
T ss_dssp ESSCHHHHHHHTSSCHHHHHHHCSEEEECCCGGGCHHHHHHHHHHHH-HHHHHHTTCSS-CCCBCHHHHHHHHH-SCCTT
T ss_pred cCcCHHHHHHcCCccHHHHHhhcCcEEeCCChhhhhHHHHHHHHHHH-HHHHHHhCCCc-ccCcCHHHHHHHHh-CCCCC
Confidence 9974 3578999999964 67777765 56666666554 44444555421 13689999988764 55578
Q ss_pred hHHHHHHHHHHHHH
Q psy8969 573 GVRNLQKHIEKVTR 586 (1230)
Q Consensus 573 gvR~l~~~i~~i~r 586 (1230)
++|.|++.++.++.
T Consensus 225 n~reL~~~l~~~~~ 238 (265)
T 2bjv_A 225 NIRELKNVVERSVY 238 (265)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH
Confidence 99999999888653
No 100
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}
Probab=99.57 E-value=2.2e-15 Score=141.62 Aligned_cols=87 Identities=33% Similarity=0.717 Sum_probs=57.7
Q ss_pred CCceecCCCccCccccChhhHHHHHhhccCCCCccccccccccccCCchhHhhhhccccCCCCccCCCCCcccCChhhHH
Q psy8969 819 EKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRSYRQLCTLN 898 (1230)
Q Consensus 819 ekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~~~~C~k~F~~~~~L~~H~~~H~~ekpy~C~~Cgk~F~~~~~L~ 898 (1230)
.++|.|..+.|++.|.+...|..|++.|+++++|.|.++.|++.|.+...|..|+++|++++||.|+.|++.|.+...|.
T Consensus 13 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~ 92 (100)
T 2ebt_A 13 RRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLA 92 (100)
T ss_dssp CCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHHHH
T ss_pred CcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHHHH
Confidence 45666654346666666666666666666666666642246777777677777776676667777777777777777777
Q ss_pred hHHhhhc
Q psy8969 899 VHKKTNH 905 (1230)
Q Consensus 899 ~H~k~hh 905 (1230)
.|+++|+
T Consensus 93 ~H~~~H~ 99 (100)
T 2ebt_A 93 LHMKRHQ 99 (100)
T ss_dssp HHHHHHC
T ss_pred HHHHHhC
Confidence 7776664
No 101
>1sxj_D Activator 1 41 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=99.57 E-value=4.4e-15 Score=171.68 Aligned_cols=218 Identities=14% Similarity=0.243 Sum_probs=140.4
Q ss_pred cccccChHHHHHHHHHHHHHhhhcCCCCCceEEEeCCCCCCchHHHHHHHHHhCC------CeEEEecCCcchhHHHhhc
Q psy8969 353 DDDHYGMEDVKKRILEFIAVSQLKGTTQGKILCFYGPPGVGKTSIAKSIARALNR------EYFRFSVGGMSDVAEIKGH 426 (1230)
Q Consensus 353 ~~d~~G~~~vK~~i~e~l~~~~~~~~~~~~~llL~GPPG~GKTslak~iA~~l~~------~~~~~~~~~~~d~~~i~g~ 426 (1230)
-++++|++++++.|..++.. ...+.++|+||||||||++|++||+.++. .++.++.++......++..
T Consensus 36 ~~~i~g~~~~~~~l~~~l~~------~~~~~~ll~G~~G~GKT~la~~la~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (353)
T 1sxj_D 36 LDEVTAQDHAVTVLKKTLKS------ANLPHMLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREK 109 (353)
T ss_dssp TTTCCSCCTTHHHHHHHTTC------TTCCCEEEECSTTSSHHHHHHHHHHHHHHHHHHTTSEEEECSSSCCCHHHHTTH
T ss_pred HHHhhCCHHHHHHHHHHHhc------CCCCEEEEECCCCCCHHHHHHHHHHHhCCCcccccceEEEccccccchHHHHHH
Confidence 35799999999998887631 12234899999999999999999999753 4666766543332222211
Q ss_pred cccccccCc-hhHHHHHHhh-cCCCCEEEEecccccCCCCCCChhhHHHhhcChhhhhhhhhhccCccccCCceEEEEec
Q psy8969 427 RRTYVGAMP-GKVIQCMKKT-KTENPLVLIDEVDKIGKGYSGDPASALLEMLDPEQNANFLDHYLDVPVDLSRVLFICTA 504 (1230)
Q Consensus 427 ~~~~~g~~~-g~i~~~~~~~-~~~~pvillDEIDk~~~~~~~~~~~all~~ld~~q~~~f~d~~~~~~~d~s~v~~I~Ta 504 (1230)
...+..... +......... .....||||||||.+.. +..++|+++++... .++.||+++
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~vliiDE~~~l~~----~~~~~Ll~~le~~~---------------~~~~~il~~ 170 (353)
T 1sxj_D 110 VKNFARLTVSKPSKHDLENYPCPPYKIIILDEADSMTA----DAQSALRRTMETYS---------------GVTRFCLIC 170 (353)
T ss_dssp HHHHHHSCCCCCCTTHHHHSCCCSCEEEEETTGGGSCH----HHHHHHHHHHHHTT---------------TTEEEEEEE
T ss_pred HHHHhhhcccccchhhcccCCCCCceEEEEECCCccCH----HHHHHHHHHHHhcC---------------CCceEEEEe
Confidence 111110000 0000000001 11234999999999843 23566777665311 356788889
Q ss_pred CCCCCCCHhhhcccceeecCCCCHHHHHHHHHHhhcchhHHhcCCCCCCcccCHHHHHHHHHHhhhhhhHHHHHHHHHHH
Q psy8969 505 NVIDTIPEPLRDRMEMIDVSGYVAEEKVAIAAQYLIPQAMKESGLSPEQITLEPSAIQVLIKNYCRESGVRNLQKHIEKV 584 (1230)
Q Consensus 505 N~~~~I~~~L~~R~~~i~~~~~~~~e~~~i~~~~l~~~~~~~~gl~~~~i~~~~~~~~~li~~~~~e~gvR~l~~~i~~i 584 (1230)
|.++.++++|++|+..+.+.+++.++...++...+- . ..+.++++++..|++. + .+.+|.+...++.+
T Consensus 171 ~~~~~l~~~l~sR~~~i~~~~~~~~~~~~~l~~~~~-----~-----~~~~i~~~~l~~l~~~-~-~G~~r~~~~~l~~~ 238 (353)
T 1sxj_D 171 NYVTRIIDPLASQCSKFRFKALDASNAIDRLRFISE-----Q-----ENVKCDDGVLERILDI-S-AGDLRRGITLLQSA 238 (353)
T ss_dssp SCGGGSCHHHHHHSEEEECCCCCHHHHHHHHHHHHH-----T-----TTCCCCHHHHHHHHHH-T-SSCHHHHHHHHHHT
T ss_pred CchhhCcchhhccCceEEeCCCCHHHHHHHHHHHHH-----H-----hCCCCCHHHHHHHHHH-c-CCCHHHHHHHHHHH
Confidence 999999999999999999999999999888776542 2 3456889999888865 3 36788877776664
Q ss_pred HHHHHHHHhhcCCCceEechhhhhhhcC
Q psy8969 585 TRKVALTIVKKESDKVTVTNDNLSDFVG 612 (1230)
Q Consensus 585 ~r~~~~~~~~~~~~~~~i~~~~~~~~~~ 612 (1230)
.... ........|+.+++.+.++
T Consensus 239 ~~~~-----~~~~~~~~It~~~v~~~~~ 261 (353)
T 1sxj_D 239 SKGA-----QYLGDGKNITSTQVEELAG 261 (353)
T ss_dssp HHHH-----HHHCSCCCCCHHHHHHHHT
T ss_pred HHhc-----CCCccCccccHHHHHHHhC
Confidence 4321 1111112478888887776
No 102
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=99.56 E-value=3.4e-15 Score=139.12 Aligned_cols=86 Identities=33% Similarity=0.649 Sum_probs=67.9
Q ss_pred cCCCceecCCCccCccccChhhHHHHHhhccCCCCccccccccccccCCchhHhhhhccccCC--CCccCCCCCcccCCh
Q psy8969 817 TGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDI--RPFICDRCPRSYRQL 894 (1230)
Q Consensus 817 ~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~~~~C~k~F~~~~~L~~H~~~H~~e--kpy~C~~Cgk~F~~~ 894 (1230)
+++++|.|.. |++.|.+...|..|++.|++++||.|.. |++.|.+...|..|++.|+++ ++|.|..|++.|.+.
T Consensus 3 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~ 78 (95)
T 2yt9_A 3 SGSSGVACEI--CGKIFRDVYHLNRHKLSHSGEKPYSCPV--CGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRP 78 (95)
T ss_dssp CCCSCEECSS--SCCEESSSHHHHHHHHHSCSSCSEECSS--SCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSH
T ss_pred CCCCCeECCC--CCCccCChHHHHHHHHhcCCCCCCcCCC--CCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCH
Confidence 4677888877 8888888888888888888888888865 888888888888888888776 788888888888888
Q ss_pred hhHHhHHh-hhcC
Q psy8969 895 CTLNVHKK-TNHR 906 (1230)
Q Consensus 895 ~~L~~H~k-~hh~ 906 (1230)
..|..|++ .|.+
T Consensus 79 ~~L~~H~~~~H~~ 91 (95)
T 2yt9_A 79 DHLNGHIKQVHSG 91 (95)
T ss_dssp HHHHHHHHHTSCC
T ss_pred HHHHHHHHHhcCC
Confidence 88888876 4443
No 103
>1ojl_A Transcriptional regulatory protein ZRAR; response regulator, two component system, AAA domain, NTRC family, DNA-binding; HET: ATP; 3.0A {Salmonella typhimurium}
Probab=99.56 E-value=1.7e-14 Score=164.56 Aligned_cols=211 Identities=18% Similarity=0.315 Sum_probs=140.8
Q ss_pred cccccChHHHHHHHHHHHHHhhhcCCCCCceEEEeCCCCCCchHHHHHHHHHh---CCCeEEEecCCcch---hHHHhhc
Q psy8969 353 DDDHYGMEDVKKRILEFIAVSQLKGTTQGKILCFYGPPGVGKTSIAKSIARAL---NREYFRFSVGGMSD---VAEIKGH 426 (1230)
Q Consensus 353 ~~d~~G~~~vK~~i~e~l~~~~~~~~~~~~~llL~GPPG~GKTslak~iA~~l---~~~~~~~~~~~~~d---~~~i~g~ 426 (1230)
|++++|.....+.+.+.+.... ..+..+||+||||||||++|++|+... +.||+.++++.+.+ .+++.|+
T Consensus 1 ~~~iig~s~~~~~~~~~~~~~a----~~~~~vLi~Ge~GtGKt~lAr~i~~~~~~~~~~~v~v~~~~~~~~l~~~~lfg~ 76 (304)
T 1ojl_A 1 GSHMIGSSPAMQHLLNEIAMVA----PSDATVLIHGDSGTGKELVARALHACSARSDRPLVTLNCAALNESLLESELFGH 76 (304)
T ss_dssp --CCCCCSHHHHHHHHHHHHHC----STTSCEEEESCTTSCHHHHHHHHHHHSSCSSSCCCEEECSSCCHHHHHHHHTCC
T ss_pred CCCcEECCHHHHHHHHHHHHHh----CCCCcEEEECCCCchHHHHHHHHHHhCcccCCCeEEEeCCCCChHHHHHHhcCc
Confidence 4678999999888888775322 234568899999999999999999976 57899999988765 3456665
Q ss_pred cc-cccccC---chhHHHHHHhhcCCCCEEEEecccccCCCCCCChhhHHHhhcChhhhhhhhhhccCccccCCceEEEE
Q psy8969 427 RR-TYVGAM---PGKVIQCMKKTKTENPLVLIDEVDKIGKGYSGDPASALLEMLDPEQNANFLDHYLDVPVDLSRVLFIC 502 (1230)
Q Consensus 427 ~~-~~~g~~---~g~i~~~~~~~~~~~pvillDEIDk~~~~~~~~~~~all~~ld~~q~~~f~d~~~~~~~d~s~v~~I~ 502 (1230)
.+ .|.|+. +|.+ ..+ .+.+|||||||.+.. +....|+.+|+.. .|...-...+. ..++.+|+
T Consensus 77 ~~g~~tg~~~~~~g~~----~~a--~~g~L~LDEi~~l~~----~~q~~Ll~~l~~~---~~~~~g~~~~~-~~~~riI~ 142 (304)
T 1ojl_A 77 EKGAFTGADKRREGRF----VEA--DGGTLFLDEIGDISP----LMQVRLLRAIQER---EVQRVGSNQTI-SVDVRLIA 142 (304)
T ss_dssp CSSCCC---CCCCCHH----HHH--TTSEEEEESCTTCCH----HHHHHHHHHHHSS---BCCBTTBCCCC-BCCCEEEE
T ss_pred cccccCchhhhhcCHH----Hhc--CCCEEEEeccccCCH----HHHHHHHHHHhcC---EeeecCCcccc-cCCeEEEE
Confidence 43 233332 2332 222 357999999999843 3456777776542 11110001111 24678999
Q ss_pred ecCCC-------CCCCHhhhcccce--eecCCCC--HHHHHHHHHHhhcchhHHhcCCCCCCcccCHHHHHHHHHHhhhh
Q psy8969 503 TANVI-------DTIPEPLRDRMEM--IDVSGYV--AEEKVAIAAQYLIPQAMKESGLSPEQITLEPSAIQVLIKNYCRE 571 (1230)
Q Consensus 503 TaN~~-------~~I~~~L~~R~~~--i~~~~~~--~~e~~~i~~~~l~~~~~~~~gl~~~~i~~~~~~~~~li~~~~~e 571 (1230)
|||.. ..+.+.|.+|+.+ |.++++. .+|...++..++ .+...+.|. ....++++++..+. .|...
T Consensus 143 atn~~l~~~v~~g~fr~~L~~Rl~~~~i~lPpL~eR~edi~~l~~~~l-~~~~~~~~~--~~~~~s~~a~~~L~-~~~wp 218 (304)
T 1ojl_A 143 ATHRDLAEEVSAGRFRQDLYYRLNVVAIEMPSLRQRREDIPLLADHFL-RRFAERNRK--VVKGFTPQAMDLLI-HYDWP 218 (304)
T ss_dssp EESSCHHHHHHHTSSCHHHHHHHSSEEEECCCSGGGGGGHHHHHHHHH-HHHHHHTTC--CCCCBCHHHHHHHH-HCCCS
T ss_pred ecCccHHHHHHhCCcHHHHHhhcCeeEEeccCHHHhHhhHHHHHHHHH-HHHHHHhcc--CccCCCHHHHHHHH-cCCCC
Confidence 99975 3578899999976 4577766 466666666555 444445443 34578999988876 56667
Q ss_pred hhHHHHHHHHHHHH
Q psy8969 572 SGVRNLQKHIEKVT 585 (1230)
Q Consensus 572 ~gvR~l~~~i~~i~ 585 (1230)
+++|.|++.++.++
T Consensus 219 GnvReL~~~l~~~~ 232 (304)
T 1ojl_A 219 GNIRELENAIERAV 232 (304)
T ss_dssp SHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH
Confidence 89999999888755
No 104
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A
Probab=99.55 E-value=2.5e-15 Score=138.19 Aligned_cols=85 Identities=34% Similarity=0.753 Sum_probs=44.4
Q ss_pred CceecCCCccCccccChhhHHHHHhhccCCCCccccccccccccCCchhHhhhhccccCCCCccCCCCCcccCChhhHHh
Q psy8969 820 KPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRSYRQLCTLNV 899 (1230)
Q Consensus 820 kpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~~~~C~k~F~~~~~L~~H~~~H~~ekpy~C~~Cgk~F~~~~~L~~ 899 (1230)
++|.|..++|++.|.+...|..|++.|++++||.|.++.|++.|.+...|..|+++|++++||.|+.|++.|.+.+.|..
T Consensus 4 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~ 83 (89)
T 2wbs_A 4 ATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLAL 83 (89)
T ss_dssp CCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHH
T ss_pred CCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHHH
Confidence 34555444455555555555555555555555555322355555555555555555555555555555555555555555
Q ss_pred HHhhh
Q psy8969 900 HKKTN 904 (1230)
Q Consensus 900 H~k~h 904 (1230)
|+++|
T Consensus 84 H~~~H 88 (89)
T 2wbs_A 84 HMKRH 88 (89)
T ss_dssp HGGGG
T ss_pred HHHhh
Confidence 55544
No 105
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.55 E-value=5.4e-16 Score=146.54 Aligned_cols=79 Identities=18% Similarity=0.283 Sum_probs=71.6
Q ss_pred CCCCCchhhhccccccCCCCcccCCccccccccc-CchhhhhhcccccC-CCCEeecccccCccccchhhHHHHhhhccC
Q psy8969 1144 KTFSSAHHMKVHLRIHSGIRPYKCPVEYCEKAFS-TQYSRKAHIRTHTG-EKPYRCAHEFCSKSFKTSGDLQKHVRTHTD 1221 (1230)
Q Consensus 1144 K~F~s~s~Lk~H~R~HTGEKPykCpve~CgKsF~-~ks~Lk~H~RtHTG-EKPy~C~~e~CGKsF~~ks~LkrH~R~HtG 1221 (1230)
..+...+.+.+|+++|++++||+|+ .|++.|. ++..|++|+++|++ ++||.| ++|+|.|.++.+|++|+++|++
T Consensus 4 ~s~~~~~~~~~h~~~h~~~~~~~C~--~C~k~f~~~~~~L~~H~~~h~~~~~~~~C--~~C~k~F~~~~~L~~H~~~h~~ 79 (98)
T 2gqj_A 4 GSSGPGGPEEQWQRAIHERGEAVCP--TCNVVTRKTLVGLKKHMEVCQKLQDALKC--QHCRKQFKSKAGLNYHTMAEHS 79 (98)
T ss_dssp CCCCCCCSCSHHHHTTTTTSCCCCT--TTCCCCSSCSHHHHHHHHHHHHHHHHHSC--SSSCCCCSCHHHHHHHHHHHSC
T ss_pred CCCCCCCcHHHHHHHhccCCCcCCC--CCCCChhhhHHHHHHHHHHHcCCCCCEEC--CCCCCccCCHHHHHHHHHHHcC
Confidence 4566778899999999999999995 5999999 99999999999999 999999 4799999999999999999999
Q ss_pred ccccc
Q psy8969 1222 EFQMS 1226 (1230)
Q Consensus 1222 E~~~s 1226 (1230)
++...
T Consensus 80 ~kp~~ 84 (98)
T 2gqj_A 80 AKPSD 84 (98)
T ss_dssp SCSSC
T ss_pred CCCCC
Confidence 98754
No 106
>2chq_A Replication factor C small subunit; DNA-binding protein, DNA replication, clamp loader, AAA+ ATP ATP-binding, nucleotide-binding; HET: ANP; 3.5A {Archaeoglobus fulgidus} PDB: 2chv_A
Probab=99.55 E-value=6.8e-15 Score=167.34 Aligned_cols=200 Identities=19% Similarity=0.318 Sum_probs=136.9
Q ss_pred ccccChHHHHHHHHHHHHHhhhcCCCCCceEEEeCCCCCCchHHHHHHHHHh-----CCCeEEEecCCcchhHHHhhccc
Q psy8969 354 DDHYGMEDVKKRILEFIAVSQLKGTTQGKILCFYGPPGVGKTSIAKSIARAL-----NREYFRFSVGGMSDVAEIKGHRR 428 (1230)
Q Consensus 354 ~d~~G~~~vK~~i~e~l~~~~~~~~~~~~~llL~GPPG~GKTslak~iA~~l-----~~~~~~~~~~~~~d~~~i~g~~~ 428 (1230)
++++|++++++.|.+++.. ...+.++|+||||||||++|+++|+.+ +.+|+.++.+.....
T Consensus 17 ~~~~g~~~~~~~l~~~l~~------~~~~~~ll~G~~G~GKt~la~~l~~~l~~~~~~~~~~~~~~~~~~~~-------- 82 (319)
T 2chq_A 17 DEVVGQDEVIQRLKGYVER------KNIPHLLFSGPPGTGKTATAIALARDLFGENWRDNFIEMNASDERGI-------- 82 (319)
T ss_dssp GGSCSCHHHHHHHHTTTTT------TCCCCEEEESSSSSSHHHHHHHHHHHHHTTCHHHHCEEEETTSTTCT--------
T ss_pred HHHhCCHHHHHHHHHHHhC------CCCCeEEEECcCCcCHHHHHHHHHHHhcCCcccCCeEEEeCccccCh--------
Confidence 4689999999988887632 223348999999999999999999997 345677775432210
Q ss_pred cccccCchhHHHHHH-hh---cCCCCEEEEecccccCCCCCCChhhHHHhhcChhhhhhhhhhccCccccCCceEEEEec
Q psy8969 429 TYVGAMPGKVIQCMK-KT---KTENPLVLIDEVDKIGKGYSGDPASALLEMLDPEQNANFLDHYLDVPVDLSRVLFICTA 504 (1230)
Q Consensus 429 ~~~g~~~g~i~~~~~-~~---~~~~pvillDEIDk~~~~~~~~~~~all~~ld~~q~~~f~d~~~~~~~d~s~v~~I~Ta 504 (1230)
..... .+..+. .. .....||||||+|.+.. +..++|+..++. ...++.||+|+
T Consensus 83 ---~~~~~-~~~~~~~~~~~~~~~~~vliiDe~~~l~~----~~~~~L~~~le~---------------~~~~~~~i~~~ 139 (319)
T 2chq_A 83 ---DVVRH-KIKEFARTAPIGGAPFKIIFLDEADALTA----DAQAALRRTMEM---------------YSKSCRFILSC 139 (319)
T ss_dssp ---TTSSH-HHHHHHHSCCSSSCCCEEEEEETGGGSCH----HHHHTTGGGTSS---------------SSSSEEEEEEE
T ss_pred ---HHHHH-HHHHHHhcCCCCCCCceEEEEeCCCcCCH----HHHHHHHHHHHh---------------cCCCCeEEEEe
Confidence 11111 111121 11 12356999999999743 223444444432 12578899999
Q ss_pred CCCCCCCHhhhcccceeecCCCCHHHHHHHHHHhhcchhHHhcCCCCCCcccCHHHHHHHHHHhhhhhhHHHHHHHHHHH
Q psy8969 505 NVIDTIPEPLRDRMEMIDVSGYVAEEKVAIAAQYLIPQAMKESGLSPEQITLEPSAIQVLIKNYCRESGVRNLQKHIEKV 584 (1230)
Q Consensus 505 N~~~~I~~~L~~R~~~i~~~~~~~~e~~~i~~~~l~~~~~~~~gl~~~~i~~~~~~~~~li~~~~~e~gvR~l~~~i~~i 584 (1230)
|..+.++++|++|+.++.+.+++.++...++...+ .+. .+.++++++..++.. .++++|.+...++.+
T Consensus 140 ~~~~~l~~~l~sr~~~i~~~~~~~~~~~~~l~~~~-----~~~-----~~~i~~~~l~~l~~~--~~G~~r~~~~~l~~~ 207 (319)
T 2chq_A 140 NYVSRIIEPIQSRCAVFRFKPVPKEAMKKRLLEIC-----EKE-----GVKITEDGLEALIYI--SGGDFRKAINALQGA 207 (319)
T ss_dssp SCGGGSCHHHHTTCEEEECCCCCHHHHHHHHHHHH-----HTT-----CCCBCHHHHHHHHHT--TTTCHHHHHHHHHHH
T ss_pred CChhhcchHHHhhCeEEEecCCCHHHHHHHHHHHH-----HHc-----CCCCCHHHHHHHHHH--cCCCHHHHHHHHHHH
Confidence 99999999999999999999999999888776654 233 456889999988843 377888887777654
Q ss_pred HHHHHHHHhhcCCCceEechhhhhhhcCC
Q psy8969 585 TRKVALTIVKKESDKVTVTNDNLSDFVGK 613 (1230)
Q Consensus 585 ~r~~~~~~~~~~~~~~~i~~~~~~~~~~~ 613 (1230)
.. . . -.|+.+++.++++.
T Consensus 208 ~~------~-~----~~i~~~~v~~~~~~ 225 (319)
T 2chq_A 208 AA------I-G----EVVDADTIYQITAT 225 (319)
T ss_dssp HH------S-S----SCBCHHHHHHHTTC
T ss_pred HH------c-C----CCCCHHHHHHHHCC
Confidence 31 1 1 14788888877764
No 107
>3nbx_X ATPase RAVA; AAA+ ATPase, alpha-beta-alpha structure, rossman fold, hydro; HET: ADP; 2.91A {Escherichia coli}
Probab=99.54 E-value=7.3e-15 Score=177.61 Aligned_cols=239 Identities=17% Similarity=0.163 Sum_probs=136.6
Q ss_pred HHHHhhhhcccccChHHHHHHHHHHHHHhhhcCCCCCceEEEeCCCCCCchHHHHHHHHHhCC--CeEEEecCCcchhHH
Q psy8969 345 LTQAAKILDDDHYGMEDVKKRILEFIAVSQLKGTTQGKILCFYGPPGVGKTSIAKSIARALNR--EYFRFSVGGMSDVAE 422 (1230)
Q Consensus 345 ~~~~~~~l~~d~~G~~~vK~~i~e~l~~~~~~~~~~~~~llL~GPPG~GKTslak~iA~~l~~--~~~~~~~~~~~d~~~ 422 (1230)
+......|...++|++++++.++..+.. +..+||+||||||||+||++||..++. +|..+.+.. ....+
T Consensus 13 ~~~l~~~l~~~ivGq~~~i~~l~~al~~--------~~~VLL~GpPGtGKT~LAraLa~~l~~~~~f~~~~~~~-~t~~d 83 (500)
T 3nbx_X 13 ISRLSSSLEKGLYERSHAIRLCLLAALS--------GESVFLLGPPGIAKSLIARRLKFAFQNARAFEYLMTRF-STPEE 83 (500)
T ss_dssp HHHHHHHHHTTCSSCHHHHHHHHHHHHH--------TCEEEEECCSSSSHHHHHHHGGGGBSSCCEEEEECCTT-CCHHH
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHhc--------CCeeEeecCchHHHHHHHHHHHHHHhhhhHHHHHHHhc-CCHHH
Confidence 5566777899999999999988877632 357999999999999999999999954 555555432 23455
Q ss_pred HhhccccccccCchhHHHHHHhhcCCCCEEEEecccccCCCCCCChhhHHHhhcChhhhhhhhhhccCccccCCceEEEE
Q psy8969 423 IKGHRRTYVGAMPGKVIQCMKKTKTENPLVLIDEVDKIGKGYSGDPASALLEMLDPEQNANFLDHYLDVPVDLSRVLFIC 502 (1230)
Q Consensus 423 i~g~~~~~~g~~~g~i~~~~~~~~~~~pvillDEIDk~~~~~~~~~~~all~~ld~~q~~~f~d~~~~~~~d~s~v~~I~ 502 (1230)
+.|....+.....|.+..+.......+.|+|||||+++. .+..++|+++|+..+.. . .+....+...++|+
T Consensus 84 L~G~~~~~~~~~~g~~~~~~~g~l~~~~IL~IDEI~r~~----~~~q~~LL~~lee~~v~---i--~G~~~~~~~~~iI~ 154 (500)
T 3nbx_X 84 VFGPLSIQALKDEGRYERLTSGYLPEAEIVFLDEIWKAG----PAILNTLLTAINERQFR---N--GAHVEKIPMRLLVA 154 (500)
T ss_dssp HHCCBC----------CBCCTTSGGGCSEEEEESGGGCC----HHHHHHHHHHHHSSEEE---C--SSSEEECCCCEEEE
T ss_pred hcCcccHHHHhhchhHHhhhccCCCcceeeeHHhHhhhc----HHHHHHHHHHHHHHhcc---C--CCCcCCcchhhhhh
Confidence 555321110000111100000000135689999999863 34578899888643211 1 22233444445677
Q ss_pred ecCCCCC---CCHhhhcccce-eecCCCCH-HHHHHHHHHhhcchhHHhcC----C----------CCCCcccCHHHHHH
Q psy8969 503 TANVIDT---IPEPLRDRMEM-IDVSGYVA-EEKVAIAAQYLIPQAMKESG----L----------SPEQITLEPSAIQV 563 (1230)
Q Consensus 503 TaN~~~~---I~~~L~~R~~~-i~~~~~~~-~e~~~i~~~~l~~~~~~~~g----l----------~~~~i~~~~~~~~~ 563 (1230)
|||.+.. ..++|+|||.+ |.++.+.. ++...|+.++.... ..... + ....+.++++++.+
T Consensus 155 ATN~lpe~~~~~~aLldRF~~~i~v~~p~~~ee~~~IL~~~~~~~-~~~~~~~~~~~~e~l~~~~~~~~~v~v~d~v~e~ 233 (500)
T 3nbx_X 155 ASNELPEADSSLEALYDRMLIRLWLDKVQDKANFRSMLTSQQDEN-DNPVPDALQVTDEEYERWQKEIGEITLPDHVFEL 233 (500)
T ss_dssp EESSCCCTTCTTHHHHTTCCEEEECCSCCCHHHHHHHHTCCCCTT-SCCSCTTTSBCHHHHHHHHHHHTTCBCCHHHHHH
T ss_pred ccccCCCccccHHHHHHHHHHHHHHHHhhhhhhHHHHHhcccccC-CCCCCccceecHHHHHHHHhcCCcccCchHHHHH
Confidence 7886433 44699999976 66666665 55667765543110 00000 0 01256788888888
Q ss_pred HHHHhh--------hhhhHHHHHHHHHHHHHHHHHHHhhcCCCceEechhhhh
Q psy8969 564 LIKNYC--------RESGVRNLQKHIEKVTRKVALTIVKKESDKVTVTNDNLS 608 (1230)
Q Consensus 564 li~~~~--------~e~gvR~l~~~i~~i~r~~~~~~~~~~~~~~~i~~~~~~ 608 (1230)
+++.+. ...+.|.+...+.. .+ |...+.+. -.|+++++.
T Consensus 234 i~~l~~~lr~~r~~~~iS~R~~~~llr~-A~--A~A~l~gr---~~Vt~eDv~ 280 (500)
T 3nbx_X 234 IFMLRQQLDKLPDAPYVSDRRWKKAIRL-LQ--ASAFFSGR---SAVAPVDLI 280 (500)
T ss_dssp HHHHHHHHHHCSSSCCCCHHHHHHHHHH-HH--HHHHHTTC---SBCCGGGGG
T ss_pred HHHHHHHhhcCCCCCccchhHHHHHHHH-HH--HHHhhcCC---ccccchHHH
Confidence 876552 13455666544432 22 22222222 246677766
No 108
>1njg_A DNA polymerase III subunit gamma; rossman-like fold, AAA+ ATPase domains, sensor 1, sensor 2, transferase; HET: DNA; 2.20A {Escherichia coli} SCOP: c.37.1.20 PDB: 1njf_A*
Probab=99.54 E-value=1e-13 Score=149.61 Aligned_cols=213 Identities=23% Similarity=0.294 Sum_probs=135.4
Q ss_pred ccccChHHHHHHHHHHHHHhhhcCCCCCceEEEeCCCCCCchHHHHHHHHHhCCCeEEEe--cCCcchhHHHhhc-cccc
Q psy8969 354 DDHYGMEDVKKRILEFIAVSQLKGTTQGKILCFYGPPGVGKTSIAKSIARALNREYFRFS--VGGMSDVAEIKGH-RRTY 430 (1230)
Q Consensus 354 ~d~~G~~~vK~~i~e~l~~~~~~~~~~~~~llL~GPPG~GKTslak~iA~~l~~~~~~~~--~~~~~d~~~i~g~-~~~~ 430 (1230)
++++|.+++++.|.+++... ..+..++|+||||+|||++|+++|+.++....... .+...+...+... ...+
T Consensus 23 ~~~~g~~~~~~~l~~~l~~~-----~~~~~~ll~G~~G~GKT~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (250)
T 1njg_A 23 ADVVGQEHVLTALANGLSLG-----RIHHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIEQGRFVDL 97 (250)
T ss_dssp GGCCSCHHHHHHHHHHHHHT-----CCCSEEEEECSTTSCHHHHHHHHHHHHHCTTCSCSSCCSCSHHHHHHHTTCCSSE
T ss_pred HHHhCcHHHHHHHHHHHHcC-----CCCeEEEEECCCCCCHHHHHHHHHHHhcCCCCCCCCCCcccHHHHHHhccCCcce
Confidence 56999999999999887531 22357899999999999999999999875432111 1111111111000 0000
Q ss_pred c--c----cCchhHHHHHHhhc-----CCCCEEEEecccccCCCCCCChhhHHHhhcChhhhhhhhhhccCccccCCceE
Q psy8969 431 V--G----AMPGKVIQCMKKTK-----TENPLVLIDEVDKIGKGYSGDPASALLEMLDPEQNANFLDHYLDVPVDLSRVL 499 (1230)
Q Consensus 431 ~--g----~~~g~i~~~~~~~~-----~~~pvillDEIDk~~~~~~~~~~~all~~ld~~q~~~f~d~~~~~~~d~s~v~ 499 (1230)
+ . .....+.+.+.... ....||+|||+|.+.. +....|+..++. ...++.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlviDe~~~l~~----~~~~~l~~~l~~---------------~~~~~~ 158 (250)
T 1njg_A 98 IEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYLIDEVHMLSR----HSFNALLKTLEE---------------PPEHVK 158 (250)
T ss_dssp EEEETTCGGGHHHHHHHHHSCCCSCSSSSSEEEEEETGGGSCH----HHHHHHHHHHHS---------------CCTTEE
T ss_pred EEecCcccccHHHHHHHHHHhhhchhcCCceEEEEECcccccH----HHHHHHHHHHhc---------------CCCceE
Confidence 0 0 01122333333322 1235888999998732 223444444421 124788
Q ss_pred EEEecCCCCCCCHhhhcccceeecCCCCHHHHHHHHHHhhcchhHHhcCCCCCCcccCHHHHHHHHHHhhhhhhHHHHHH
Q psy8969 500 FICTANVIDTIPEPLRDRMEMIDVSGYVAEEKVAIAAQYLIPQAMKESGLSPEQITLEPSAIQVLIKNYCRESGVRNLQK 579 (1230)
Q Consensus 500 ~I~TaN~~~~I~~~L~~R~~~i~~~~~~~~e~~~i~~~~l~~~~~~~~gl~~~~i~~~~~~~~~li~~~~~e~gvR~l~~ 579 (1230)
+|+|+|....+++++++|+..+.+.+++.+|...++..++- .. .+.++++++..+++. + ++..|.+..
T Consensus 159 ~i~~t~~~~~~~~~l~~r~~~i~l~~l~~~e~~~~l~~~~~-----~~-----~~~~~~~~~~~l~~~-~-~G~~~~~~~ 226 (250)
T 1njg_A 159 FLLATTDPQKLPVTILSRCLQFHLKALDVEQIRHQLEHILN-----EE-----HIAHEPRALQLLARA-A-EGSLRDALS 226 (250)
T ss_dssp EEEEESCGGGSCHHHHTTSEEEECCCCCHHHHHHHHHHHHH-----HT-----TCCBCHHHHHHHHHH-H-TTCHHHHHH
T ss_pred EEEEeCChHhCCHHHHHHhhhccCCCCCHHHHHHHHHHHHH-----hc-----CCCCCHHHHHHHHHH-c-CCCHHHHHH
Confidence 99999999999999999999999999999999888876552 22 356788888877754 4 557777776
Q ss_pred HHHHHHHHHHHHHhhcCCCceEechhhhhhhcC
Q psy8969 580 HIEKVTRKVALTIVKKESDKVTVTNDNLSDFVG 612 (1230)
Q Consensus 580 ~i~~i~r~~~~~~~~~~~~~~~i~~~~~~~~~~ 612 (1230)
.+..++. ... . .|+.+++.+.+|
T Consensus 227 ~~~~~~~-------~~~-~--~i~~~~v~~~~~ 249 (250)
T 1njg_A 227 LTDQAIA-------SGD-G--QVSTQAVSAMLG 249 (250)
T ss_dssp HHHHHHT-------TTT-S--SBCHHHHHHHSC
T ss_pred HHHHHHh-------ccC-c--eecHHHHHHHhC
Confidence 6655431 111 1 588888888776
No 109
>1ypw_A Transitional endoplasmic reticulum ATPase; AAA, P97/VCP, ERAD, CDC48; HET: ADP ANP; 3.50A {Mus musculus} PDB: 1oz4_A* 1yq0_A* 1yqi_A* 1r7r_A* 3cf2_A* 3cf1_A* 3cf3_A*
Probab=99.54 E-value=5.4e-15 Score=189.28 Aligned_cols=167 Identities=23% Similarity=0.363 Sum_probs=126.3
Q ss_pred hhcccccChHHHHHHHHHHHHHhhhc-------CCCCCceEEEeCCCCCCchHHHHHHHHHhCCCeEEEecCCcchhHHH
Q psy8969 351 ILDDDHYGMEDVKKRILEFIAVSQLK-------GTTQGKILCFYGPPGVGKTSIAKSIARALNREYFRFSVGGMSDVAEI 423 (1230)
Q Consensus 351 ~l~~d~~G~~~vK~~i~e~l~~~~~~-------~~~~~~~llL~GPPG~GKTslak~iA~~l~~~~~~~~~~~~~d~~~i 423 (1230)
+-.+|++|++++++.|.+++...... +...+..+||+||||||||+||++||..++.+|+.++...+.+
T Consensus 201 v~~~di~G~~~~~~~l~e~i~~~l~~~~~~~~l~i~~~~~vLL~Gp~GtGKTtLarala~~l~~~~i~v~~~~l~~---- 276 (806)
T 1ypw_A 201 VGYDDVGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMS---- 276 (806)
T ss_dssp CCGGGCCSCSGGGGHHHHHHHHHHHCGGGGTSSCCCCCCEEEECSCTTSSHHHHHHHHHHTTTCEEEEEEHHHHSS----
T ss_pred CCHHHhCChHHHHHHHHHHHHHHhhCHHHHHhcCCCCCCeEEEECcCCCCHHHHHHHHHHHcCCcEEEEEchHhhh----
Confidence 33478999999999999998653322 4567789999999999999999999999999999888533322
Q ss_pred hhccccccccCchhHHHHHHhhcCCCC-EEEEecccccCCCCCCCh-------hhHHHhhcChhhhhhhhhhccCccccC
Q psy8969 424 KGHRRTYVGAMPGKVIQCMKKTKTENP-LVLIDEVDKIGKGYSGDP-------ASALLEMLDPEQNANFLDHYLDVPVDL 495 (1230)
Q Consensus 424 ~g~~~~~~g~~~g~i~~~~~~~~~~~p-villDEIDk~~~~~~~~~-------~~all~~ld~~q~~~f~d~~~~~~~d~ 495 (1230)
.|.|.....+...|..+....| ++||||||.+...+.... .+.|+++++.. ...
T Consensus 277 -----~~~g~~~~~l~~vf~~a~~~~p~il~iDEid~l~~~~~~~~~~~~~~~~~~Ll~ll~g~-------------~~~ 338 (806)
T 1ypw_A 277 -----KLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGL-------------KQR 338 (806)
T ss_dssp -----SSTTHHHHHHHHHHHHHHHHCSEEEEEESGGGTSCTTSCCCSHHHHHHHHHHHHHHHSS-------------CTT
T ss_pred -----hhhhhHHHHHHHHHHHHHhcCCcEEEeccHHHhhhccccccchHHHHHHHHHHHHhhhh-------------ccc
Confidence 4667777778888877766555 888999999876433221 12333333321 122
Q ss_pred CceEEEEecCCCCCCCHhhhc--ccc-eeecCCCCHHHHHHHHHHhh
Q psy8969 496 SRVLFICTANVIDTIPEPLRD--RME-MIDVSGYVAEEKVAIAAQYL 539 (1230)
Q Consensus 496 s~v~~I~TaN~~~~I~~~L~~--R~~-~i~~~~~~~~e~~~i~~~~l 539 (1230)
.++++|+|+|+++.|+++|++ ||. .|.+..++.++...|++.+.
T Consensus 339 ~~v~vI~atn~~~~ld~al~r~gRf~~~i~i~~p~~~~r~~il~~~~ 385 (806)
T 1ypw_A 339 AHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHT 385 (806)
T ss_dssp SCCEEEEECSCTTTSCTTTTSTTSSCEEECCCCCCHHHHHHHHHHTT
T ss_pred ccEEEecccCCchhcCHHHhcccccccccccCCCCHHHHHHHHHHHH
Confidence 578999999999999999998 885 57888899999998887654
No 110
>1l8q_A Chromosomal replication initiator protein DNAA; AAA+, helix-turn-helix, nucleotide-binding, DNA binding, REP initiation, DNA binding protein; HET: ADP; 2.70A {Aquifex aeolicus} SCOP: a.4.12.2 c.37.1.20 PDB: 3r8f_A* 2hcb_A*
Probab=99.54 E-value=3.2e-14 Score=163.36 Aligned_cols=170 Identities=16% Similarity=0.260 Sum_probs=117.7
Q ss_pred CCceEEEeCCCCCCchHHHHHHHHHh---CCCeEEEecCCcchhHHHhhccccccccCchhHHHHHHhhcCCCCEEEEec
Q psy8969 380 QGKILCFYGPPGVGKTSIAKSIARAL---NREYFRFSVGGMSDVAEIKGHRRTYVGAMPGKVIQCMKKTKTENPLVLIDE 456 (1230)
Q Consensus 380 ~~~~llL~GPPG~GKTslak~iA~~l---~~~~~~~~~~~~~d~~~i~g~~~~~~g~~~g~i~~~~~~~~~~~pvillDE 456 (1230)
.+..++|+||||||||+||++||+.+ +.+++.++...+.+ + ++++........|........||||||
T Consensus 36 ~~~~lll~G~~GtGKT~la~~i~~~~~~~~~~~~~i~~~~~~~--~-------~~~~~~~~~~~~~~~~~~~~~vL~iDE 106 (324)
T 1l8q_A 36 LYNPIFIYGSVGTGKTHLLQAAGNEAKKRGYRVIYSSADDFAQ--A-------MVEHLKKGTINEFRNMYKSVDLLLLDD 106 (324)
T ss_dssp SCSSEEEECSSSSSHHHHHHHHHHHHHHTTCCEEEEEHHHHHH--H-------HHHHHHHTCHHHHHHHHHTCSEEEEEC
T ss_pred CCCeEEEECCCCCcHHHHHHHHHHHHHHCCCEEEEEEHHHHHH--H-------HHHHHHcCcHHHHHHHhcCCCEEEEcC
Confidence 45789999999999999999999999 89999988654322 1 111111111222222223467999999
Q ss_pred ccccCCCCCCChhhHHHhhcChhhhhhhhhhccCccccCCceEEEEecCCCC---CCCHhhhccc---ceeecCCCCHHH
Q psy8969 457 VDKIGKGYSGDPASALLEMLDPEQNANFLDHYLDVPVDLSRVLFICTANVID---TIPEPLRDRM---EMIDVSGYVAEE 530 (1230)
Q Consensus 457 IDk~~~~~~~~~~~all~~ld~~q~~~f~d~~~~~~~d~s~v~~I~TaN~~~---~I~~~L~~R~---~~i~~~~~~~~e 530 (1230)
||.+... ......|+.+++.. .+....++|+|+|.+. .++++|++|| .++.+.+ +.++
T Consensus 107 i~~l~~~--~~~~~~l~~~l~~~-------------~~~~~~iii~~~~~~~~l~~l~~~L~sR~~~~~~i~l~~-~~~e 170 (324)
T 1l8q_A 107 VQFLSGK--ERTQIEFFHIFNTL-------------YLLEKQIILASDRHPQKLDGVSDRLVSRFEGGILVEIEL-DNKT 170 (324)
T ss_dssp GGGGTTC--HHHHHHHHHHHHHH-------------HHTTCEEEEEESSCGGGCTTSCHHHHHHHHTSEEEECCC-CHHH
T ss_pred cccccCC--hHHHHHHHHHHHHH-------------HHCCCeEEEEecCChHHHHHhhhHhhhcccCceEEEeCC-CHHH
Confidence 9998531 01233444444321 1223456677777665 7899999999 6789999 9999
Q ss_pred HHHHHHHhhcchhHHhcCCCCCCcccCHHHHHHHHHHhhhhhhHHHHHHHHHHHHHH
Q psy8969 531 KVAIAAQYLIPQAMKESGLSPEQITLEPSAIQVLIKNYCRESGVRNLQKHIEKVTRK 587 (1230)
Q Consensus 531 ~~~i~~~~l~~~~~~~~gl~~~~i~~~~~~~~~li~~~~~e~gvR~l~~~i~~i~r~ 587 (1230)
...|+..++- .. .+.++++++..|++.. +++|.|+..++.++..
T Consensus 171 ~~~il~~~~~-----~~-----~~~l~~~~l~~l~~~~---g~~r~l~~~l~~~~~~ 214 (324)
T 1l8q_A 171 RFKIIKEKLK-----EF-----NLELRKEVIDYLLENT---KNVREIEGKIKLIKLK 214 (324)
T ss_dssp HHHHHHHHHH-----HT-----TCCCCHHHHHHHHHHC---SSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-----hc-----CCCCCHHHHHHHHHhC---CCHHHHHHHHHHHHHc
Confidence 9999887652 22 3568899998887664 8899999999888765
No 111
>3pxg_A Negative regulator of genetic competence CLPC/MEC; CLPB, proteolysis, CLPX, HSP100/CLP, AAA+ proteins, PR binding; 3.65A {Bacillus subtilis}
Probab=99.53 E-value=3.5e-14 Score=171.41 Aligned_cols=164 Identities=20% Similarity=0.353 Sum_probs=112.6
Q ss_pred ccccChHHHHHHHHHHHHHhhhcCCCCCceEEEeCCCCCCchHHHHHHHHHh----------CCCeEEEecCCcchhHHH
Q psy8969 354 DDHYGMEDVKKRILEFIAVSQLKGTTQGKILCFYGPPGVGKTSIAKSIARAL----------NREYFRFSVGGMSDVAEI 423 (1230)
Q Consensus 354 ~d~~G~~~vK~~i~e~l~~~~~~~~~~~~~llL~GPPG~GKTslak~iA~~l----------~~~~~~~~~~~~~d~~~i 423 (1230)
++++|.++..+++.+.+.. .....+||+||||||||++|++||..+ +.+|+.++++
T Consensus 180 d~iiGr~~~i~~l~~~l~r------~~~~~~LL~G~pG~GKT~la~~la~~l~~~~~p~~l~~~~~~~l~~~-------- 245 (468)
T 3pxg_A 180 DPVIGRSKEIQRVIEVLSR------RTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVMTLDMG-------- 245 (468)
T ss_dssp CCCCCCHHHHHHHHHHHHC------SSSCEEEEESCTTTTTHHHHHHHHHHHHSSCSCTTTSSCCEECC-----------
T ss_pred CCccCcHHHHHHHHHHHhc------cCCCCeEEECCCCCCHHHHHHHHHHHHHhCCCChhhcCCeEEEeeCC--------
Confidence 4699999999999998753 234568899999999999999999997 7788887765
Q ss_pred hhccccccccCchhHHHHHHhhcCCC-CEEEEecccccCCCCCCChhhHHHhhcChhhhhhhhhhccCccccCCceEEEE
Q psy8969 424 KGHRRTYVGAMPGKVIQCMKKTKTEN-PLVLIDEVDKIGKGYSGDPASALLEMLDPEQNANFLDHYLDVPVDLSRVLFIC 502 (1230)
Q Consensus 424 ~g~~~~~~g~~~g~i~~~~~~~~~~~-pvillDEIDk~~~~~~~~~~~all~~ld~~q~~~f~d~~~~~~~d~s~v~~I~ 502 (1230)
..|.|....++...|..+.... .||||| + ..+..+.|+.+|+ -..+.+|+
T Consensus 246 ----~~~~g~~e~~~~~~~~~~~~~~~~iLfiD-----~---~~~a~~~L~~~L~-----------------~g~v~vI~ 296 (468)
T 3pxg_A 246 ----TKYRGEFEDRLKKVMDEIRQAGNIILFID-----A---AIDASNILKPSLA-----------------RGELQCIG 296 (468)
T ss_dssp -----------CTTHHHHHHHHHTCCCCEEEEC-----C-----------CCCTT-----------------SSSCEEEE
T ss_pred ----ccccchHHHHHHHHHHHHHhcCCeEEEEe-----C---chhHHHHHHHhhc-----------------CCCEEEEe
Confidence 2466777777777777665444 578888 1 1233344444443 24688999
Q ss_pred ecCCCC-----CCCHhhhcccceeecCCCCHHHHHHHHHHhhcchhHHhcCCCCCCcccCHHHHHHHHH
Q psy8969 503 TANVID-----TIPEPLRDRMEMIDVSGYVAEEKVAIAAQYLIPQAMKESGLSPEQITLEPSAIQVLIK 566 (1230)
Q Consensus 503 TaN~~~-----~I~~~L~~R~~~i~~~~~~~~e~~~i~~~~l~~~~~~~~gl~~~~i~~~~~~~~~li~ 566 (1230)
|||..+ .++++|++||.+|.+..|+.++...|++.++ ++....+ .+.++++++..+++
T Consensus 297 at~~~e~~~~~~~~~al~~Rf~~i~v~~p~~e~~~~iL~~~~-~~~~~~~-----~~~i~~~al~~l~~ 359 (468)
T 3pxg_A 297 ATTLDEYRKYIEKDAALERRFQPIQVDQPSVDESIQILQGLR-DRYEAHH-----RVSITDDAIEAAVK 359 (468)
T ss_dssp ECCTTTTHHHHTTCSHHHHSEEEEECCCCCHHHHHHHHHHTT-TTSGGGS-----SCSCCHHHHHHHHH
T ss_pred cCCHHHHHHHhhcCHHHHHhCccceeCCCCHHHHHHHHHHHH-HHHHHhc-----CCCCCHHHHHHHHH
Confidence 999887 7999999999999999999999999998654 3333233 34567777766654
No 112
>1jbk_A CLPB protein; beta barrel, chaperone; 1.80A {Escherichia coli} SCOP: c.37.1.20
Probab=99.52 E-value=9.4e-15 Score=152.35 Aligned_cols=155 Identities=20% Similarity=0.330 Sum_probs=104.6
Q ss_pred hhhcccccChHHHHHHHHHHHHHhhhcCCCCCceEEEeCCCCCCchHHHHHHHHHh----------CCCeEEEecCCcch
Q psy8969 350 KILDDDHYGMEDVKKRILEFIAVSQLKGTTQGKILCFYGPPGVGKTSIAKSIARAL----------NREYFRFSVGGMSD 419 (1230)
Q Consensus 350 ~~l~~d~~G~~~vK~~i~e~l~~~~~~~~~~~~~llL~GPPG~GKTslak~iA~~l----------~~~~~~~~~~~~~d 419 (1230)
..--++++|.++..+++.+++.. ..+..++|+||||||||++|+++|+.+ +.+++.++++.+..
T Consensus 18 ~~~~~~~~g~~~~~~~l~~~l~~------~~~~~~ll~G~~G~GKT~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (195)
T 1jbk_A 18 QGKLDPVIGRDEEIRRTIQVLQR------RTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVA 91 (195)
T ss_dssp TTCSCCCCSCHHHHHHHHHHHTS------SSSCEEEEECCTTSCHHHHHHHHHHHHHHTCSCGGGTTCEEEEECHHHHHT
T ss_pred hccccccccchHHHHHHHHHHhc------CCCCceEEECCCCCCHHHHHHHHHHHHHhCCCchhhcCCcEEEeeHHHHhc
Confidence 33446799999999999888742 345678999999999999999999997 66777666532211
Q ss_pred hHHHhhccccccccCchhHHHHHHhh-cCCCC-EEEEecccccCCCC----CCChhhHHHhhcChhhhhhhhhhccCccc
Q psy8969 420 VAEIKGHRRTYVGAMPGKVIQCMKKT-KTENP-LVLIDEVDKIGKGY----SGDPASALLEMLDPEQNANFLDHYLDVPV 493 (1230)
Q Consensus 420 ~~~i~g~~~~~~g~~~g~i~~~~~~~-~~~~p-villDEIDk~~~~~----~~~~~~all~~ld~~q~~~f~d~~~~~~~ 493 (1230)
+ ..+.|.....+.+.+... ....+ ||+|||||.+.... ..+....|..++
T Consensus 92 -----~--~~~~~~~~~~~~~~~~~~~~~~~~~vl~iDe~~~l~~~~~~~~~~~~~~~l~~~~----------------- 147 (195)
T 1jbk_A 92 -----G--AKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPAL----------------- 147 (195)
T ss_dssp -----T--TCSHHHHHHHHHHHHHHHHHSTTTEEEEEETGGGGTT------CCCCHHHHHHHH-----------------
T ss_pred -----c--CCccccHHHHHHHHHHHHhhcCCCeEEEEeCHHHHhccCcccchHHHHHHHHHhh-----------------
Confidence 0 112333333344444432 23334 89999999986432 112223333222
Q ss_pred cCCceEEEEecCCCC-----CCCHhhhcccceeecCCCCHHHHHHH
Q psy8969 494 DLSRVLFICTANVID-----TIPEPLRDRMEMIDVSGYVAEEKVAI 534 (1230)
Q Consensus 494 d~s~v~~I~TaN~~~-----~I~~~L~~R~~~i~~~~~~~~e~~~i 534 (1230)
+..++.+|+|+|..+ .++++|++||..|.+..|+.+|...|
T Consensus 148 ~~~~~~~i~~~~~~~~~~~~~~~~~l~~r~~~i~~~~p~~~~~~~i 193 (195)
T 1jbk_A 148 ARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAI 193 (195)
T ss_dssp HTTSCCEEEEECHHHHHHHTTTCHHHHTTEEEEECCCCCHHHHHTT
T ss_pred ccCCeEEEEeCCHHHHHHHHhcCHHHHHHhceeecCCCCHHHHHHH
Confidence 224678899898876 78999999999999999999987655
No 113
>2v1u_A Cell division control protein 6 homolog; DNA replication, nucleotide-binding, replication, archaea; HET: ADP; 3.10A {Aeropyrum pernix}
Probab=99.52 E-value=1.2e-13 Score=161.10 Aligned_cols=230 Identities=17% Similarity=0.204 Sum_probs=145.2
Q ss_pred ccccChHHHHHHHHHHHHHhhhcCCCCCceEEEeCCCCCCchHHHHHHHHHh---------CCCeEEEecCCcchhHHHh
Q psy8969 354 DDHYGMEDVKKRILEFIAVSQLKGTTQGKILCFYGPPGVGKTSIAKSIARAL---------NREYFRFSVGGMSDVAEIK 424 (1230)
Q Consensus 354 ~d~~G~~~vK~~i~e~l~~~~~~~~~~~~~llL~GPPG~GKTslak~iA~~l---------~~~~~~~~~~~~~d~~~i~ 424 (1230)
++++|.++..+.|.+++... +. ...+..++|+||||||||++|+++++.+ +.+|+.+++....+...+.
T Consensus 19 ~~~~gr~~~~~~l~~~l~~~-~~-~~~~~~vll~G~~G~GKT~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 96 (387)
T 2v1u_A 19 DVLPHREAELRRLAEVLAPA-LR-GEKPSNALLYGLTGTGKTAVARLVLRRLEARASSLGVLVKPIYVNARHRETPYRVA 96 (387)
T ss_dssp SCCTTCHHHHHHHHHTTGGG-TS-SCCCCCEEECBCTTSSHHHHHHHHHHHHHHHHHHHTCCEEEEEEETTTSCSHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHH-Hc-CCCCCcEEEECCCCCCHHHHHHHHHHHHHHHHhccCCCeEEEEEECCcCCCHHHHH
Confidence 67999999999999887421 11 2456789999999999999999999999 8888999876655433221
Q ss_pred -------hccccccccCchhHHHHHHhhc-CC--CCEEEEecccccCCCCCCChhhHHHhhcChhhhhhhhhhccCcccc
Q psy8969 425 -------GHRRTYVGAMPGKVIQCMKKTK-TE--NPLVLIDEVDKIGKGYSGDPASALLEMLDPEQNANFLDHYLDVPVD 494 (1230)
Q Consensus 425 -------g~~~~~~g~~~g~i~~~~~~~~-~~--~pvillDEIDk~~~~~~~~~~~all~~ld~~q~~~f~d~~~~~~~d 494 (1230)
|......|...+.+...+...- .. ..||||||||.+.... .....|+.+++.... ..
T Consensus 97 ~~l~~~l~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vlilDEi~~l~~~~--~~~~~l~~l~~~~~~-----------~~ 163 (387)
T 2v1u_A 97 SAIAEAVGVRVPFTGLSVGEVYERLVKRLSRLRGIYIIVLDEIDFLPKRP--GGQDLLYRITRINQE-----------LG 163 (387)
T ss_dssp HHHHHHHSCCCCSSCCCHHHHHHHHHHHHTTSCSEEEEEEETTTHHHHST--THHHHHHHHHHGGGC-----------C-
T ss_pred HHHHHHhCCCCCCCCCCHHHHHHHHHHHHhccCCeEEEEEccHhhhcccC--CCChHHHhHhhchhh-----------cC
Confidence 1111122333344343333222 22 2388899999985321 123444444332110 01
Q ss_pred -CCceEEEEecCCC---CCCCHhhhccc--ceeecCCCCHHHHHHHHHHhhcchhHHhcCCCCCCcccCHHHHHHHHHHh
Q psy8969 495 -LSRVLFICTANVI---DTIPEPLRDRM--EMIDVSGYVAEEKVAIAAQYLIPQAMKESGLSPEQITLEPSAIQVLIKNY 568 (1230)
Q Consensus 495 -~s~v~~I~TaN~~---~~I~~~L~~R~--~~i~~~~~~~~e~~~i~~~~l~~~~~~~~gl~~~~i~~~~~~~~~li~~~ 568 (1230)
..++.+|+|+|.. +.+++++++|| .+|.+++|+.++...|+...+-. ++ ....++++++..+.+..
T Consensus 164 ~~~~~~~I~~t~~~~~~~~l~~~l~~r~~~~~i~l~~l~~~~~~~il~~~~~~------~~--~~~~~~~~~~~~l~~~~ 235 (387)
T 2v1u_A 164 DRVWVSLVGITNSLGFVENLEPRVKSSLGEVELVFPPYTAPQLRDILETRAEE------AF--NPGVLDPDVVPLCAALA 235 (387)
T ss_dssp ----CEEEEECSCSTTSSSSCHHHHTTTTSEECCBCCCCHHHHHHHHHHHHHH------HB--CTTTBCSSHHHHHHHHH
T ss_pred CCceEEEEEEECCCchHhhhCHHHHhcCCCeEEeeCCCCHHHHHHHHHHHHHh------hc--cCCCCCHHHHHHHHHHH
Confidence 3578999999987 78999999999 67999999999999998876521 11 13456778888777554
Q ss_pred hhh-hhHHHHHHHHHHHHHHHHHHHhhcCCCceEechhhhhhhcC
Q psy8969 569 CRE-SGVRNLQKHIEKVTRKVALTIVKKESDKVTVTNDNLSDFVG 612 (1230)
Q Consensus 569 ~~e-~gvR~l~~~i~~i~r~~~~~~~~~~~~~~~i~~~~~~~~~~ 612 (1230)
.+. +.+|.+...+..+...+ ... ....|+.+++.+.+.
T Consensus 236 ~~~~G~~r~~~~~l~~a~~~a-----~~~-~~~~i~~~~v~~a~~ 274 (387)
T 2v1u_A 236 AREHGDARRALDLLRVAGEIA-----ERR-REERVRREHVYSARA 274 (387)
T ss_dssp HSSSCCHHHHHHHHHHHHHHH-----HHT-TCSCBCHHHHHHHHH
T ss_pred HHhccCHHHHHHHHHHHHHHH-----HHc-CCCCcCHHHHHHHHH
Confidence 322 56777776666554322 111 122467777766553
No 114
>1sxj_A Activator 1 95 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=99.52 E-value=6.7e-14 Score=171.04 Aligned_cols=203 Identities=17% Similarity=0.290 Sum_probs=130.4
Q ss_pred hcccccChHHHHHHHHHHHHHhhhc-----------CCCCCceEEEeCCCCCCchHHHHHHHHHhCCCeEEEecCCcchh
Q psy8969 352 LDDDHYGMEDVKKRILEFIAVSQLK-----------GTTQGKILCFYGPPGVGKTSIAKSIARALNREYFRFSVGGMSDV 420 (1230)
Q Consensus 352 l~~d~~G~~~vK~~i~e~l~~~~~~-----------~~~~~~~llL~GPPG~GKTslak~iA~~l~~~~~~~~~~~~~d~ 420 (1230)
--++++|++++++.|.+++...... +...++.+||+||||||||++|++||+.+|.+++.++.+.....
T Consensus 37 ~~~dliG~~~~~~~L~~~l~~~~~~~~~~~~~~g~~~~~~~~~lLL~GppGtGKTtla~~la~~l~~~~i~in~s~~~~~ 116 (516)
T 1sxj_A 37 NLQQVCGNKGSVMKLKNWLANWENSKKNSFKHAGKDGSGVFRAAMLYGPPGIGKTTAAHLVAQELGYDILEQNASDVRSK 116 (516)
T ss_dssp SGGGCCSCHHHHHHHHHHHHTHHHHHHTTTCCCCTTSTTSCSEEEEECSTTSSHHHHHHHHHHHTTCEEEEECTTSCCCH
T ss_pred CHHHhcCCHHHHHHHHHHHHHhHhhchhhccccCccCCCCCcEEEEECCCCCCHHHHHHHHHHHcCCCEEEEeCCCcchH
Confidence 3467999999999999998642211 11245789999999999999999999999999999998776553
Q ss_pred HHHhhccccccccCchhHHHHHHhh------cCCCCEEEEecccccCCCCCCChhhHHHhhcChhhhhhhhhhccCcccc
Q psy8969 421 AEIKGHRRTYVGAMPGKVIQCMKKT------KTENPLVLIDEVDKIGKGYSGDPASALLEMLDPEQNANFLDHYLDVPVD 494 (1230)
Q Consensus 421 ~~i~g~~~~~~g~~~g~i~~~~~~~------~~~~pvillDEIDk~~~~~~~~~~~all~~ld~~q~~~f~d~~~~~~~d 494 (1230)
..+........+.. .+...|..+ .....||||||||.+..... ....+|+.+++..
T Consensus 117 ~~~~~~i~~~~~~~--~~~~~~~~~~~~~~~~~~~~vliIDEid~l~~~~~-~~l~~L~~~l~~~--------------- 178 (516)
T 1sxj_A 117 TLLNAGVKNALDNM--SVVGYFKHNEEAQNLNGKHFVIIMDEVDGMSGGDR-GGVGQLAQFCRKT--------------- 178 (516)
T ss_dssp HHHHHTGGGGTTBC--CSTTTTTC----CCSSTTSEEEEECSGGGCCTTST-THHHHHHHHHHHC---------------
T ss_pred HHHHHHHHHHhccc--cHHHHHhhhhhhhhccCCCeEEEEECCCccchhhH-HHHHHHHHHHHhc---------------
Confidence 22211111111100 011111111 12345889999999865322 2235555554320
Q ss_pred CCceEEEEecCCCCCCCHhhhcccceeecCCCCHHHHHHHHHHhhcchhHHhcCCCCCCcccCHHHHHHHHHHhhhhhhH
Q psy8969 495 LSRVLFICTANVIDTIPEPLRDRMEMIDVSGYVAEEKVAIAAQYLIPQAMKESGLSPEQITLEPSAIQVLIKNYCRESGV 574 (1230)
Q Consensus 495 ~s~v~~I~TaN~~~~I~~~L~~R~~~i~~~~~~~~e~~~i~~~~l~~~~~~~~gl~~~~i~~~~~~~~~li~~~~~e~gv 574 (1230)
...+++|+++.....+ ++|++|+..|.+..++.++...++.+.+ ...| +.++++++..|++. + .+++
T Consensus 179 ~~~iIli~~~~~~~~l-~~l~~r~~~i~f~~~~~~~~~~~L~~i~-----~~~~-----~~i~~~~l~~la~~-s-~Gdi 245 (516)
T 1sxj_A 179 STPLILICNERNLPKM-RPFDRVCLDIQFRRPDANSIKSRLMTIA-----IREK-----FKLDPNVIDRLIQT-T-RGDI 245 (516)
T ss_dssp SSCEEEEESCTTSSTT-GGGTTTSEEEECCCCCHHHHHHHHHHHH-----HHHT-----CCCCTTHHHHHHHH-T-TTCH
T ss_pred CCCEEEEEcCCCCccc-hhhHhceEEEEeCCCCHHHHHHHHHHHH-----HHcC-----CCCCHHHHHHHHHH-c-CCcH
Confidence 1234555444333444 6789999999999999999888776643 2333 34677888888755 3 5668
Q ss_pred HHHHHHHHHHH
Q psy8969 575 RNLQKHIEKVT 585 (1230)
Q Consensus 575 R~l~~~i~~i~ 585 (1230)
|.+.+.++.++
T Consensus 246 R~~i~~L~~~~ 256 (516)
T 1sxj_A 246 RQVINLLSTIS 256 (516)
T ss_dssp HHHHHHHTHHH
T ss_pred HHHHHHHHHHH
Confidence 98888776653
No 115
>1sxj_B Activator 1 37 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=99.50 E-value=9.1e-14 Score=158.30 Aligned_cols=200 Identities=18% Similarity=0.279 Sum_probs=136.3
Q ss_pred ccccChHHHHHHHHHHHHHhhhcCCCCCceEEEeCCCCCCchHHHHHHHHHhC-----CCeEEEecCCcchhHHHhhccc
Q psy8969 354 DDHYGMEDVKKRILEFIAVSQLKGTTQGKILCFYGPPGVGKTSIAKSIARALN-----REYFRFSVGGMSDVAEIKGHRR 428 (1230)
Q Consensus 354 ~d~~G~~~vK~~i~e~l~~~~~~~~~~~~~llL~GPPG~GKTslak~iA~~l~-----~~~~~~~~~~~~d~~~i~g~~~ 428 (1230)
++++|++++++.+.+++.. ...+.++|+||||+|||++|+++|+.+. .+++.++.+.......++.
T Consensus 21 ~~~~g~~~~~~~l~~~l~~------~~~~~~ll~G~~G~GKt~la~~l~~~l~~~~~~~~~~~~~~~~~~~~~~i~~--- 91 (323)
T 1sxj_B 21 SDIVGNKETIDRLQQIAKD------GNMPHMIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASDDRGIDVVRN--- 91 (323)
T ss_dssp GGCCSCTHHHHHHHHHHHS------CCCCCEEEECSTTSSHHHHHHHHHHHHHGGGHHHHEEEECTTSCCSHHHHHT---
T ss_pred HHHHCCHHHHHHHHHHHHc------CCCCeEEEECcCCCCHHHHHHHHHHHhcCCcccCCEEEecCccccChHHHHH---
Confidence 5689999999999888742 2223499999999999999999999973 3466666543222222211
Q ss_pred cccccCchhHHHHHHh----h-cCCCCEEEEecccccCCCCCCChhhHHHhhcChhhhhhhhhhccCccccCCceEEEEe
Q psy8969 429 TYVGAMPGKVIQCMKK----T-KTENPLVLIDEVDKIGKGYSGDPASALLEMLDPEQNANFLDHYLDVPVDLSRVLFICT 503 (1230)
Q Consensus 429 ~~~g~~~g~i~~~~~~----~-~~~~pvillDEIDk~~~~~~~~~~~all~~ld~~q~~~f~d~~~~~~~d~s~v~~I~T 503 (1230)
++..+.. . .....||+|||+|.+.. +..++|+..++. ...++.||+|
T Consensus 92 ---------~~~~~~~~~~~~~~~~~~viiiDe~~~l~~----~~~~~L~~~le~---------------~~~~~~~il~ 143 (323)
T 1sxj_B 92 ---------QIKHFAQKKLHLPPGKHKIVILDEADSMTA----GAQQALRRTMEL---------------YSNSTRFAFA 143 (323)
T ss_dssp ---------HHHHHHHBCCCCCTTCCEEEEEESGGGSCH----HHHHTTHHHHHH---------------TTTTEEEEEE
T ss_pred ---------HHHHHHhccccCCCCCceEEEEECcccCCH----HHHHHHHHHHhc---------------cCCCceEEEE
Confidence 1111110 0 11245899999999743 234455555432 1246788889
Q ss_pred cCCCCCCCHhhhcccceeecCCCCHHHHHHHHHHhhcchhHHhcCCCCCCcccCHHHHHHHHHHhhhhhhHHHHHHHHHH
Q psy8969 504 ANVIDTIPEPLRDRMEMIDVSGYVAEEKVAIAAQYLIPQAMKESGLSPEQITLEPSAIQVLIKNYCRESGVRNLQKHIEK 583 (1230)
Q Consensus 504 aN~~~~I~~~L~~R~~~i~~~~~~~~e~~~i~~~~l~~~~~~~~gl~~~~i~~~~~~~~~li~~~~~e~gvR~l~~~i~~ 583 (1230)
+|..+.++++|++|+.++.+.+++.++...++.+.+ .+.| +.++++++..+++. + ++.+|.+...++.
T Consensus 144 ~~~~~~l~~~l~sr~~~i~~~~~~~~~~~~~l~~~~-----~~~~-----~~~~~~~~~~l~~~-~-~G~~r~a~~~l~~ 211 (323)
T 1sxj_B 144 CNQSNKIIEPLQSQCAILRYSKLSDEDVLKRLLQII-----KLED-----VKYTNDGLEAIIFT-A-EGDMRQAINNLQS 211 (323)
T ss_dssp ESCGGGSCHHHHTTSEEEECCCCCHHHHHHHHHHHH-----HHHT-----CCBCHHHHHHHHHH-H-TTCHHHHHHHHHH
T ss_pred eCChhhchhHHHhhceEEeecCCCHHHHHHHHHHHH-----HHcC-----CCCCHHHHHHHHHH-c-CCCHHHHHHHHHH
Confidence 999999999999999999999999999988877654 2333 45788888888765 3 6778888777776
Q ss_pred HHHHHHHHHhhcCCCceEechhhhhhhcCC
Q psy8969 584 VTRKVALTIVKKESDKVTVTNDNLSDFVGK 613 (1230)
Q Consensus 584 i~r~~~~~~~~~~~~~~~i~~~~~~~~~~~ 613 (1230)
+... .. .|+.+.+.++++.
T Consensus 212 ~~~~-------~~----~i~~~~v~~~~~~ 230 (323)
T 1sxj_B 212 TVAG-------HG----LVNADNVFKIVDS 230 (323)
T ss_dssp HHHH-------HS----SBCHHHHHHHHTS
T ss_pred HHhc-------CC----CcCHHHHHHHHCC
Confidence 5421 11 3677777777764
No 116
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=99.50 E-value=8.2e-15 Score=129.94 Aligned_cols=66 Identities=45% Similarity=0.742 Sum_probs=60.2
Q ss_pred ccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeecccccCccccchhhHHHHhhhccCcc
Q psy8969 1154 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTDEF 1223 (1230)
Q Consensus 1154 ~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~~e~CGKsF~~ks~LkrH~R~HtGE~ 1223 (1230)
.|.++|++++||+|+ .|++.|.+...|++|+++|++++||+|. +|++.|.++..|.+|+++|+++-
T Consensus 4 ~~~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~h~~~~~~~C~--~C~~~f~~~~~L~~H~~~H~~~~ 69 (72)
T 1x6e_A 4 GSSGIHSGEKPYGCV--ECGKAFSRSSILVQHQRVHTGEKPYKCL--ECGKAFSQNSGLINHQRIHTSGP 69 (72)
T ss_dssp CCCCTTTTCCCEECS--SSCCEESSHHHHHHHHHGGGCSCCEECS--SSCCEESSHHHHHHHHHHHHSSS
T ss_pred CCCcccCCCCCccCC--CCCCccCCHHHHHHHHHhcCCCCCeECC--CCCcccCCHHHHHHHHHhcCCCC
Confidence 367899999999995 5999999999999999999999999994 79999999999999999999874
No 117
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=99.50 E-value=1e-14 Score=130.92 Aligned_cols=73 Identities=30% Similarity=0.533 Sum_probs=64.7
Q ss_pred hhhccccccCCCCcccCCcccccccccCchhhhhhcc-cccCC-CCEeecccccCccccchhhHHHHhhhcc-Ccccccc
Q psy8969 1151 HMKVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIR-THTGE-KPYRCAHEFCSKSFKTSGDLQKHVRTHT-DEFQMSG 1227 (1230)
Q Consensus 1151 ~Lk~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~R-tHTGE-KPy~C~~e~CGKsF~~ks~LkrH~R~Ht-GE~~~s~ 1227 (1230)
+|.+|+++|++++||+|+ .|++.|.++..|++|++ .|+++ +||+|. +|++.|.++.+|.+|+++|+ ++...||
T Consensus 2 s~~~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~--~C~~~f~~~~~L~~H~~~~H~~~~p~sG 77 (77)
T 2ct1_A 2 SSGSSGRTHSGEKPYECY--ICHARFTQSGTMKMHILQKHTENVAKFHCP--HCDTVIARKSDLGVHLRKQHSYSGPSSG 77 (77)
T ss_dssp CCCCCCCCCSCCCSEECT--TTCCEESCHHHHHHHHHHHSSSSCSSEECS--SSSCEESSHHHHHHHHHHTSCCSCCCCC
T ss_pred CCCccccccCCCCCeECC--CcCchhCCHHHHHHHHHHhcCCCCCccCCC--CCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence 578999999999999995 59999999999999997 78885 899994 79999999999999999855 5666654
No 118
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=99.49 E-value=5.9e-15 Score=131.50 Aligned_cols=63 Identities=33% Similarity=0.765 Sum_probs=43.2
Q ss_pred cCCCCCccCCCCCCCCCCchhhhccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCE
Q psy8969 1131 STSSENNVCPECKKTFSSAHHMKVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPY 1195 (1230)
Q Consensus 1131 ~t~~kpy~C~~CgK~F~s~s~Lk~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy 1195 (1230)
+.+.++|.|+.|++.|.+.++|.+|+++|++++||+|+ .|++.|.+++.|++|+++|+|++||
T Consensus 12 ~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~kp~ 74 (74)
T 2lce_A 12 THSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCN--ICGAQFNRPANLKTHTRIHSGEKPY 74 (74)
T ss_dssp CCCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECT--TTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred cCCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECC--CCCchhCCHHHHHHHHHhcCCCCCC
Confidence 34556677777777777777777777777777777774 4777777777777777777777665
No 119
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=99.49 E-value=6.1e-15 Score=140.60 Aligned_cols=66 Identities=17% Similarity=0.307 Sum_probs=61.6
Q ss_pred cCCCCCccCCCCCCCCCCchhhhcccc-cc---CCCCcccCCcccccccccCchhhhhh-cccccCCCCEeec
Q psy8969 1131 STSSENNVCPECKKTFSSAHHMKVHLR-IH---SGIRPYKCPVEYCEKAFSTQYSRKAH-IRTHTGEKPYRCA 1198 (1230)
Q Consensus 1131 ~t~~kpy~C~~CgK~F~s~s~Lk~H~R-~H---TGEKPykCpve~CgKsF~~ks~Lk~H-~RtHTGEKPy~C~ 1198 (1230)
.++++||.|+.||+.|.++++|.+|++ +| ++++||+|+ .|+|+|.+++.|++| +++|+||+||.|.
T Consensus 13 ~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~--~Cgk~F~~~~~L~~H~~r~Htgekpy~C~ 83 (102)
T 2ghf_A 13 KKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCV--ECNFLTKRYDALSEHNLKYHPGEENFKLT 83 (102)
T ss_dssp CCCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEET--TTTEEESSTHHHHTHHHHTSTTCCCEEEE
T ss_pred CCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCC--CCCcccCCHHHHHHHHHHhcCCCCCeeCC
Confidence 478899999999999999999999998 59 679999995 699999999999999 8999999999995
No 120
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=99.49 E-value=1.5e-14 Score=133.17 Aligned_cols=64 Identities=23% Similarity=0.615 Sum_probs=51.4
Q ss_pred ccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeecccccCccccchhhHHHHh-hhccCcc
Q psy8969 1156 LRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHV-RTHTDEF 1223 (1230)
Q Consensus 1156 ~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~~e~CGKsF~~ks~LkrH~-R~HtGE~ 1223 (1230)
+.+|+++++|.|+ +|+|+|.+++.|++|+++|++++||.| ++|+|+|.++.+|.+|+ +.|++|.
T Consensus 20 ~~~~~~~~~h~C~--~Cgk~F~~~~~L~~H~~~H~~~k~~~C--~~C~k~F~~~~~L~~H~~~~H~~E~ 84 (85)
T 2lv2_A 20 LGLSASAECHLCP--VCGESFASKGAQERHLRLLHAAQVFPC--KYCPATFYSSPGLTRHINKCHPSEN 84 (85)
T ss_dssp CSSCCCCTTEECT--TSCCEESSHHHHHHHHHTTSCSSSEEC--TTSSCEESSHHHHHHHHHTTCTTCC
T ss_pred CCCCCCCCCEECC--CCCCCcCcHHHHhhhhhhccCCCccCC--CCCCCEeCCHHHHHHhCcccCcCCC
Confidence 4567788888885 488888888888888888888888888 46888888888888886 5687774
No 121
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=99.48 E-value=2.1e-14 Score=129.13 Aligned_cols=76 Identities=28% Similarity=0.541 Sum_probs=53.7
Q ss_pred cCCCceecCCCccCccccChhhHHHHHh-hccCCCCccccccccccccCCchhHhhhhccccCCCCccCCCCCcccC
Q psy8969 817 TGEKPYVCGEAGCDKSFASATNYKNHMR-IHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRSYR 892 (1230)
Q Consensus 817 ~gekpy~C~~~~Cgk~F~~~s~L~~H~r-~Htgekpy~C~~~~C~k~F~~~~~L~~H~~~H~~ekpy~C~~Cgk~F~ 892 (1230)
+++++|.|..+.|++.|.+...|..|++ .|++++||.|..+.|++.|.+...|..|+++|++++||.|+.|+++|.
T Consensus 3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F~ 79 (79)
T 2dlk_A 3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSSG 79 (79)
T ss_dssp SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCCC
T ss_pred CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCCC
Confidence 4566777765557777777777777777 577777777753337777777777777777777777777777777764
No 122
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=99.48 E-value=1.6e-14 Score=131.86 Aligned_cols=72 Identities=22% Similarity=0.514 Sum_probs=40.5
Q ss_pred hhccccccCCCCcccCCcccccccccCchhhhhhcccccCC----CCEeecccccCccccchhhHHHHhhhccCcccccc
Q psy8969 1152 MKVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGE----KPYRCAHEFCSKSFKTSGDLQKHVRTHTDEFQMSG 1227 (1230)
Q Consensus 1152 Lk~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGE----KPy~C~~e~CGKsF~~ks~LkrH~R~HtGE~~~s~ 1227 (1230)
|.+|+++|++++||+|+ .|++.|.+...|.+|+++|+++ +||.|. +|++.|.++.+|.+|+++|+++..+.+
T Consensus 3 ~~~H~~~H~~~k~~~C~--~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~~~~~ 78 (86)
T 1x6h_A 3 SGSSGRTHTGEKPYACS--HCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCS--KCGKTFTRRNTMARHADNCAGPDGVEG 78 (86)
T ss_dssp TTCCSTTCCCCCCEECS--SSSCEESSHHHHHHHHHHTTCSSCCCCCEECS--SSCCEESCHHHHHHHHHHCCCCCSCCC
T ss_pred cccccceecCCCCCcCC--CCCCccCCHHHHHHHHHHhcCCcCCCcceECC--CCCChhCCHHHHHHHHHHccCCCCccc
Confidence 45566666666666663 3666666666666665544443 456662 466666666666666666655554443
No 123
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=99.48 E-value=2.1e-14 Score=128.98 Aligned_cols=71 Identities=41% Similarity=0.618 Sum_probs=65.7
Q ss_pred hccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeecccccCccccchhhHHHHhhhccCcccccc
Q psy8969 1153 KVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTDEFQMSG 1227 (1230)
Q Consensus 1153 k~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~~e~CGKsF~~ks~LkrH~R~HtGE~~~s~ 1227 (1230)
..+.+.|.+++||+|+ .|++.|.+...|.+|+++|++++||.|. +|++.|.++.+|.+|+++|+|++.+.|
T Consensus 7 ~~~~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~L~~H~~~H~~~~p~~C 77 (77)
T 2cot_A 7 GRSEWQQRERRRYKCD--ECGKSFSHSSDLSKHRRTHTGEKPYKCD--ECGKAFIQRSHLIGHHRVHTGSGPSSG 77 (77)
T ss_dssp CCCCSCCCCSCSSBCS--SSCCBCSCHHHHHHHHTTTCCSCSEECS--SSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred CCCcCcCCCCCCEECC--CCCcccCCHHHHHHHHHHcCCCcCeeCC--CCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence 4566788999999995 5999999999999999999999999994 799999999999999999999998875
No 124
>1sxj_C Activator 1 40 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=99.48 E-value=1.1e-13 Score=160.01 Aligned_cols=205 Identities=21% Similarity=0.355 Sum_probs=131.7
Q ss_pred ccccChHHHHHHHHHHHHHhhhcCCCCCceEEEeCCCCCCchHHHHHHHHHhCCC-----eEEEecCCcchhHHHhhccc
Q psy8969 354 DDHYGMEDVKKRILEFIAVSQLKGTTQGKILCFYGPPGVGKTSIAKSIARALNRE-----YFRFSVGGMSDVAEIKGHRR 428 (1230)
Q Consensus 354 ~d~~G~~~vK~~i~e~l~~~~~~~~~~~~~llL~GPPG~GKTslak~iA~~l~~~-----~~~~~~~~~~d~~~i~g~~~ 428 (1230)
++++|++.+++.|..++.. + ..+.++|+||||+|||++|+++|+.+..+ +..++..+......++.
T Consensus 25 ~~~~g~~~~~~~L~~~i~~----g--~~~~~ll~Gp~G~GKTtla~~la~~l~~~~~~~~~~~~~~~~~~~~~~ir~--- 95 (340)
T 1sxj_C 25 DEVYGQNEVITTVRKFVDE----G--KLPHLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRN--- 95 (340)
T ss_dssp GGCCSCHHHHHHHHHHHHT----T--CCCCEEEECSSSSSHHHHHHHHHHHHHTTSHHHHEEEECTTSCCSHHHHHT---
T ss_pred HHhcCcHHHHHHHHHHHhc----C--CCceEEEECCCCCCHHHHHHHHHHHHcCCCccceEEEEcCcccccHHHHHH---
Confidence 4689999999988887742 2 11238999999999999999999997432 34444432211111111
Q ss_pred cccccCchhHHHHHHhh----cCCCCEEEEecccccCCCCCCChhhHHHhhcChhhhhhhhhhccCccccCCceEEEEec
Q psy8969 429 TYVGAMPGKVIQCMKKT----KTENPLVLIDEVDKIGKGYSGDPASALLEMLDPEQNANFLDHYLDVPVDLSRVLFICTA 504 (1230)
Q Consensus 429 ~~~g~~~g~i~~~~~~~----~~~~pvillDEIDk~~~~~~~~~~~all~~ld~~q~~~f~d~~~~~~~d~s~v~~I~Ta 504 (1230)
++..+... .....|++|||+|.+.. +..++|+..++.. ..++.||+++
T Consensus 96 ---------~i~~~~~~~~~~~~~~~viiiDe~~~l~~----~~~~~L~~~le~~---------------~~~~~~il~~ 147 (340)
T 1sxj_C 96 ---------QIKDFASTRQIFSKGFKLIILDEADAMTN----AAQNALRRVIERY---------------TKNTRFCVLA 147 (340)
T ss_dssp ---------HHHHHHHBCCSSSCSCEEEEETTGGGSCH----HHHHHHHHHHHHT---------------TTTEEEEEEE
T ss_pred ---------HHHHHHhhcccCCCCceEEEEeCCCCCCH----HHHHHHHHHHhcC---------------CCCeEEEEEe
Confidence 11111111 11256999999999843 3456666665421 1467788889
Q ss_pred CCCCCCCHhhhcccceeecCCCCHHHHHHHHHHhhcchhHHhcCCCCCCcccCHHHHHHHHHHhhhhhhHHHHHHHHHHH
Q psy8969 505 NVIDTIPEPLRDRMEMIDVSGYVAEEKVAIAAQYLIPQAMKESGLSPEQITLEPSAIQVLIKNYCRESGVRNLQKHIEKV 584 (1230)
Q Consensus 505 N~~~~I~~~L~~R~~~i~~~~~~~~e~~~i~~~~l~~~~~~~~gl~~~~i~~~~~~~~~li~~~~~e~gvR~l~~~i~~i 584 (1230)
|..+.|+++|++||.++.+.+++.++...++...+ +. +.+.++++++..+++. .++.+|.+...++.+
T Consensus 148 n~~~~i~~~i~sR~~~~~~~~l~~~~~~~~l~~~~-----~~-----~~~~i~~~~~~~i~~~--s~G~~r~~~~~l~~~ 215 (340)
T 1sxj_C 148 NYAHKLTPALLSQCTRFRFQPLPQEAIERRIANVL-----VH-----EKLKLSPNAEKALIEL--SNGDMRRVLNVLQSC 215 (340)
T ss_dssp SCGGGSCHHHHTTSEEEECCCCCHHHHHHHHHHHH-----HT-----TTCCBCHHHHHHHHHH--HTTCHHHHHHHTTTT
T ss_pred cCccccchhHHhhceeEeccCCCHHHHHHHHHHHH-----HH-----cCCCCCHHHHHHHHHH--cCCCHHHHHHHHHHH
Confidence 99999999999999999999999998877776544 22 3456788888877754 355666655554432
Q ss_pred HHHHHHHHhhcCCCceEechhhhhhhcCC
Q psy8969 585 TRKVALTIVKKESDKVTVTNDNLSDFVGK 613 (1230)
Q Consensus 585 ~r~~~~~~~~~~~~~~~i~~~~~~~~~~~ 613 (1230)
.. .........|+.+.+.+.++.
T Consensus 216 ~~------~~~~~~~~~it~~~v~~~~~~ 238 (340)
T 1sxj_C 216 KA------TLDNPDEDEISDDVIYECCGA 238 (340)
T ss_dssp TT------TTCSSSCCCBCHHHHHHHTTC
T ss_pred HH------hcCCcccccccHHHHHHHhCC
Confidence 21 011111124777777776663
No 125
>2z4s_A Chromosomal replication initiator protein DNAA; AAA+ ATPase, domain III (ATPase domain), ATP-binding, cytoplasm, DNA replication; HET: ADP; 3.00A {Thermotoga maritima} PDB: 2z4r_A*
Probab=99.48 E-value=1.3e-13 Score=165.00 Aligned_cols=191 Identities=17% Similarity=0.216 Sum_probs=127.2
Q ss_pred CceEEEeCCCCCCchHHHHHHHHHh-----CCCeEEEecCCcchhHHHhhccccccccCchhHHHHHHhhcC-CCCEEEE
Q psy8969 381 GKILCFYGPPGVGKTSIAKSIARAL-----NREYFRFSVGGMSDVAEIKGHRRTYVGAMPGKVIQCMKKTKT-ENPLVLI 454 (1230)
Q Consensus 381 ~~~llL~GPPG~GKTslak~iA~~l-----~~~~~~~~~~~~~d~~~i~g~~~~~~g~~~g~i~~~~~~~~~-~~pvill 454 (1230)
+..++|+||||+|||+||++||+.+ +.+++.++...+.. ++ +++........|..... ..+||||
T Consensus 130 ~~~lll~Gp~G~GKTtLa~aia~~l~~~~~~~~v~~v~~~~~~~--~~-------~~~~~~~~~~~~~~~~~~~~~vL~I 200 (440)
T 2z4s_A 130 YNPLFIYGGVGLGKTHLLQSIGNYVVQNEPDLRVMYITSEKFLN--DL-------VDSMKEGKLNEFREKYRKKVDILLI 200 (440)
T ss_dssp SCCEEEECSSSSSHHHHHHHHHHHHHHHCCSSCEEEEEHHHHHH--HH-------HHHHHTTCHHHHHHHHTTTCSEEEE
T ss_pred CCeEEEECCCCCCHHHHHHHHHHHHHHhCCCCeEEEeeHHHHHH--HH-------HHHHHcccHHHHHHHhcCCCCEEEE
Confidence 6789999999999999999999998 88888887644321 11 11111111222333323 5679999
Q ss_pred ecccccCCCCCCChhhHHHhhcChhhhhhhhhhccCccccCCceEEEEecCCCCC---CCHhhhccc---ceeecCCCCH
Q psy8969 455 DEVDKIGKGYSGDPASALLEMLDPEQNANFLDHYLDVPVDLSRVLFICTANVIDT---IPEPLRDRM---EMIDVSGYVA 528 (1230)
Q Consensus 455 DEIDk~~~~~~~~~~~all~~ld~~q~~~f~d~~~~~~~d~s~v~~I~TaN~~~~---I~~~L~~R~---~~i~~~~~~~ 528 (1230)
||||.+.... .....|+..++.. .+....++|+|.|.+.. ++++|++|| .++.+..|+.
T Consensus 201 DEi~~l~~~~--~~q~~l~~~l~~l-------------~~~~~~iIitt~~~~~~l~~l~~~L~sR~~~g~~i~l~~p~~ 265 (440)
T 2z4s_A 201 DDVQFLIGKT--GVQTELFHTFNEL-------------HDSGKQIVICSDREPQKLSEFQDRLVSRFQMGLVAKLEPPDE 265 (440)
T ss_dssp ECGGGGSSCH--HHHHHHHHHHHHH-------------HTTTCEEEEEESSCGGGCSSCCHHHHHHHHSSBCCBCCCCCH
T ss_pred eCcccccCCh--HHHHHHHHHHHHH-------------HHCCCeEEEEECCCHHHHHHHHHHHHhhccCCeEEEeCCCCH
Confidence 9999985310 1233444443321 12234566666665554 899999999 5899999999
Q ss_pred HHHHHHHHHhhcchhHHhcCCCCCCcccCHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCceEechhhhh
Q psy8969 529 EEKVAIAAQYLIPQAMKESGLSPEQITLEPSAIQVLIKNYCRESGVRNLQKHIEKVTRKVALTIVKKESDKVTVTNDNLS 608 (1230)
Q Consensus 529 ~e~~~i~~~~l~~~~~~~~gl~~~~i~~~~~~~~~li~~~~~e~gvR~l~~~i~~i~r~~~~~~~~~~~~~~~i~~~~~~ 608 (1230)
++...|+.+.+- .. .+.++++++..|++.. .+.+|.|+..++.++..+.. .+. .|+.+.+.
T Consensus 266 e~r~~iL~~~~~-----~~-----~~~i~~e~l~~la~~~--~gn~R~l~~~L~~~~~~a~~---~~~----~It~~~~~ 326 (440)
T 2z4s_A 266 ETRKSIARKMLE-----IE-----HGELPEEVLNFVAENV--DDNLRRLRGAIIKLLVYKET---TGK----EVDLKEAI 326 (440)
T ss_dssp HHHHHHHHHHHH-----HH-----TCCCCTTHHHHHHHHC--CSCHHHHHHHHHHHHHHHHH---SSS----CCCHHHHH
T ss_pred HHHHHHHHHHHH-----Hc-----CCCCCHHHHHHHHHhc--CCCHHHHHHHHHHHHHHHHH---hCC----CCCHHHHH
Confidence 999998877652 22 3457788888887653 57899999988887754322 121 38888888
Q ss_pred hhcCCC
Q psy8969 609 DFVGKP 614 (1230)
Q Consensus 609 ~~~~~~ 614 (1230)
+.++..
T Consensus 327 ~~l~~~ 332 (440)
T 2z4s_A 327 LLLKDF 332 (440)
T ss_dssp HHTSTT
T ss_pred HHHHHH
Confidence 877643
No 126
>3bos_A Putative DNA replication factor; P-loop containing nucleoside triphosphate hydrolases, struct genomics; HET: MSE CDP; 1.75A {Shewanella amazonensis} PDB: 3sc3_A
Probab=99.47 E-value=8.1e-13 Score=143.46 Aligned_cols=194 Identities=15% Similarity=0.264 Sum_probs=128.4
Q ss_pred hHHHHHHHHHHHHHhhhcCCCCCceEEEeCCCCCCchHHHHHHHHHhC---CCeEEEecCCcchhHHHhhccccccccCc
Q psy8969 359 MEDVKKRILEFIAVSQLKGTTQGKILCFYGPPGVGKTSIAKSIARALN---REYFRFSVGGMSDVAEIKGHRRTYVGAMP 435 (1230)
Q Consensus 359 ~~~vK~~i~e~l~~~~~~~~~~~~~llL~GPPG~GKTslak~iA~~l~---~~~~~~~~~~~~d~~~i~g~~~~~~g~~~ 435 (1230)
.+.+.+.+..++.. ..+..++|+||||||||++|+++|+.++ .+++.+++..+.+. +..
T Consensus 36 ~~~~~~~l~~~~~~------~~~~~~ll~G~~G~GKT~la~~l~~~~~~~~~~~~~~~~~~~~~~---------~~~--- 97 (242)
T 3bos_A 36 NDELIGALKSAASG------DGVQAIYLWGPVKSGRTHLIHAACARANELERRSFYIPLGIHASI---------STA--- 97 (242)
T ss_dssp CHHHHHHHHHHHHT------CSCSEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEGGGGGGS---------CGG---
T ss_pred CHHHHHHHHHHHhC------CCCCeEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEEEHHHHHHH---------HHH---
Confidence 45666666666532 2567899999999999999999999886 56666665443321 000
Q ss_pred hhHHHHHHhhcCCCCEEEEecccccCCCCCCCh--hhHHHhhcChhhhhhhhhhccCccccCCceEEEEecC-CCC---C
Q psy8969 436 GKVIQCMKKTKTENPLVLIDEVDKIGKGYSGDP--ASALLEMLDPEQNANFLDHYLDVPVDLSRVLFICTAN-VID---T 509 (1230)
Q Consensus 436 g~i~~~~~~~~~~~pvillDEIDk~~~~~~~~~--~~all~~ld~~q~~~f~d~~~~~~~d~s~v~~I~TaN-~~~---~ 509 (1230)
+ +. .-....||||||+|.+.. +. ...|+.+++... +...+.+|+|+| .+. .
T Consensus 98 --~---~~-~~~~~~vliiDe~~~~~~----~~~~~~~l~~~l~~~~-------------~~~~~~ii~~~~~~~~~~~~ 154 (242)
T 3bos_A 98 --L---LE-GLEQFDLICIDDVDAVAG----HPLWEEAIFDLYNRVA-------------EQKRGSLIVSASASPMEAGF 154 (242)
T ss_dssp --G---GT-TGGGSSEEEEETGGGGTT----CHHHHHHHHHHHHHHH-------------HHCSCEEEEEESSCTTTTTC
T ss_pred --H---HH-hccCCCEEEEeccccccC----CHHHHHHHHHHHHHHH-------------HcCCCeEEEEcCCCHHHHHH
Confidence 0 00 012356999999998743 23 455666554321 112332444444 333 5
Q ss_pred CCHhhhccc---ceeecCCCCHHHHHHHHHHhhcchhHHhcCCCCCCcccCHHHHHHHHHHhhhhhhHHHHHHHHHHHHH
Q psy8969 510 IPEPLRDRM---EMIDVSGYVAEEKVAIAAQYLIPQAMKESGLSPEQITLEPSAIQVLIKNYCRESGVRNLQKHIEKVTR 586 (1230)
Q Consensus 510 I~~~L~~R~---~~i~~~~~~~~e~~~i~~~~l~~~~~~~~gl~~~~i~~~~~~~~~li~~~~~e~gvR~l~~~i~~i~r 586 (1230)
+.++|++|+ .++.+..++.++...++..++ ...| +.++++++..+++.+ .+.+|.|.+.++.++.
T Consensus 155 ~~~~l~~r~~~~~~i~l~~~~~~~~~~~l~~~~-----~~~~-----~~~~~~~~~~l~~~~--~g~~r~l~~~l~~~~~ 222 (242)
T 3bos_A 155 VLPDLVSRMHWGLTYQLQPMMDDEKLAALQRRA-----AMRG-----LQLPEDVGRFLLNRM--ARDLRTLFDVLDRLDK 222 (242)
T ss_dssp CCHHHHHHHHHSEEEECCCCCGGGHHHHHHHHH-----HHTT-----CCCCHHHHHHHHHHT--TTCHHHHHHHHHHHHH
T ss_pred hhhhhhhHhhcCceEEeCCCCHHHHHHHHHHHH-----HHcC-----CCCCHHHHHHHHHHc--cCCHHHHHHHHHHHHH
Confidence 679999999 799999999999988887765 2333 467899999888753 6689999988888776
Q ss_pred HHHHHHhhcCCCceEechhhhhhhcC
Q psy8969 587 KVALTIVKKESDKVTVTNDNLSDFVG 612 (1230)
Q Consensus 587 ~~~~~~~~~~~~~~~i~~~~~~~~~~ 612 (1230)
.+.. .+ -.|+.+++.+.++
T Consensus 223 ~a~~---~~----~~It~~~v~~~l~ 241 (242)
T 3bos_A 223 ASMV---HQ----RKLTIPFVKEMLR 241 (242)
T ss_dssp HHHH---HT----CCCCHHHHHHHHT
T ss_pred HHHH---hC----CCCcHHHHHHHhh
Confidence 5321 11 1388888877654
No 127
>2p65_A Hypothetical protein PF08_0063; CLPB, malaria, structural genomics, structural genomics consortium, SGC, unknown function; 1.70A {Plasmodium falciparum}
Probab=99.46 E-value=4.2e-14 Score=147.21 Aligned_cols=150 Identities=21% Similarity=0.299 Sum_probs=98.7
Q ss_pred HhhhhcccccChHHHHHHHHHHHHHhhhcCCCCCceEEEeCCCCCCchHHHHHHHHHh----------CCCeEEEecCCc
Q psy8969 348 AAKILDDDHYGMEDVKKRILEFIAVSQLKGTTQGKILCFYGPPGVGKTSIAKSIARAL----------NREYFRFSVGGM 417 (1230)
Q Consensus 348 ~~~~l~~d~~G~~~vK~~i~e~l~~~~~~~~~~~~~llL~GPPG~GKTslak~iA~~l----------~~~~~~~~~~~~ 417 (1230)
.+..--++++|.++..+.+.+++.. ..+..++|+||||||||++|+++|+.+ +.+++.+++.++
T Consensus 16 ~~~~~~~~~~g~~~~~~~l~~~l~~------~~~~~vll~G~~G~GKT~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (187)
T 2p65_A 16 ARAGKLDPVIGRDTEIRRAIQILSR------RTKNNPILLGDPGVGKTAIVEGLAIKIVQGDVPDSLKGRKLVSLDLSSL 89 (187)
T ss_dssp HHTTCSCCCCSCHHHHHHHHHHHTS------SSSCEEEEESCGGGCHHHHHHHHHHHHHTTCSCTTTTTCEEEEECHHHH
T ss_pred HhccccchhhcchHHHHHHHHHHhC------CCCCceEEECCCCCCHHHHHHHHHHHHHhcCCcchhcCCeEEEEeHHHh
Confidence 3344446799999999998888732 345678999999999999999999998 667776654332
Q ss_pred chhHHHhhccccccccCchhHHHHHHhhcCC-C-CEEEEecccccCCCCC-----CChhhHHHhhcChhhhhhhhhhccC
Q psy8969 418 SDVAEIKGHRRTYVGAMPGKVIQCMKKTKTE-N-PLVLIDEVDKIGKGYS-----GDPASALLEMLDPEQNANFLDHYLD 490 (1230)
Q Consensus 418 ~d~~~i~g~~~~~~g~~~g~i~~~~~~~~~~-~-pvillDEIDk~~~~~~-----~~~~~all~~ld~~q~~~f~d~~~~ 490 (1230)
.. + ..+.|.....+.+.+...... . .||||||||.+..... .+....|+.++
T Consensus 90 ~~-----~--~~~~~~~~~~~~~~~~~~~~~~~~~vl~iDe~~~l~~~~~~~~~~~~~~~~l~~~~-------------- 148 (187)
T 2p65_A 90 IA-----G--AKYRGDFEERLKSILKEVQDAEGQVVMFIDEIHTVVGAGAVAEGALDAGNILKPML-------------- 148 (187)
T ss_dssp HH-----H--CCSHHHHHHHHHHHHHHHHHTTTSEEEEETTGGGGSSSSSSCTTSCCTHHHHHHHH--------------
T ss_pred hc-----C--CCchhHHHHHHHHHHHHHHhcCCceEEEEeCHHHhcccccccccchHHHHHHHHHH--------------
Confidence 11 1 112333333344444333222 3 4899999999963322 22223333322
Q ss_pred ccccCCceEEEEecCCCC-----CCCHhhhcccceeecCCCC
Q psy8969 491 VPVDLSRVLFICTANVID-----TIPEPLRDRMEMIDVSGYV 527 (1230)
Q Consensus 491 ~~~d~s~v~~I~TaN~~~-----~I~~~L~~R~~~i~~~~~~ 527 (1230)
+..++++|+|+|..+ .++++|++||..|.+..++
T Consensus 149 ---~~~~~~ii~~~~~~~~~~~~~~~~~l~~R~~~i~i~~p~ 187 (187)
T 2p65_A 149 ---ARGELRCIGATTVSEYRQFIEKDKALERRFQQILVEQPS 187 (187)
T ss_dssp ---HTTCSCEEEEECHHHHHHHTTTCHHHHHHEEEEECCSCC
T ss_pred ---hcCCeeEEEecCHHHHHHHHhccHHHHHhcCcccCCCCC
Confidence 125688999999765 6899999999998887653
No 128
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=99.46 E-value=3.5e-14 Score=129.56 Aligned_cols=80 Identities=29% Similarity=0.473 Sum_probs=74.8
Q ss_pred HHHhhhhcccCCCceecCCCccCccccChhhHHHHHhhccCC----CCccccccccccccCCchhHhhhhccccCCCCcc
Q psy8969 808 IRKVHIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGE----KPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFI 883 (1230)
Q Consensus 808 ~L~~H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htge----kpy~C~~~~C~k~F~~~~~L~~H~~~H~~ekpy~ 883 (1230)
.|.+|+++|++++||.|.. |++.|.....|..|++.|+++ +||.|.. |++.|.+...|..|+++|+++++|.
T Consensus 2 s~~~H~~~H~~~k~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~ 77 (86)
T 1x6h_A 2 SSGSSGRTHTGEKPYACSH--CDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSK--CGKTFTRRNTMARHADNCAGPDGVE 77 (86)
T ss_dssp TTTCCSTTCCCCCCEECSS--SSCEESSHHHHHHHHHHTTCSSCCCCCEECSS--SCCEESCHHHHHHHHHHCCCCCSCC
T ss_pred CcccccceecCCCCCcCCC--CCCccCCHHHHHHHHHHhcCCcCCCcceECCC--CCChhCCHHHHHHHHHHccCCCCcc
Confidence 4678999999999999999 999999999999999988765 7999986 9999999999999999999999999
Q ss_pred CCCCCccc
Q psy8969 884 CDRCPRSY 891 (1230)
Q Consensus 884 C~~Cgk~F 891 (1230)
|..|+.+|
T Consensus 78 ~~~~~~~~ 85 (86)
T 1x6h_A 78 GENSGPSS 85 (86)
T ss_dssp CCCCCCCC
T ss_pred cCCCCCCC
Confidence 99999876
No 129
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=99.46 E-value=1.3e-14 Score=136.96 Aligned_cols=76 Identities=14% Similarity=0.299 Sum_probs=70.4
Q ss_pred CCCCCCchhhhccccccCCCCcccCCcccccccc-cCchhhhhhcccccCCCCEeecccccCccccchhhHHHH-hhhcc
Q psy8969 1143 KKTFSSAHHMKVHLRIHSGIRPYKCPVEYCEKAF-STQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKH-VRTHT 1220 (1230)
Q Consensus 1143 gK~F~s~s~Lk~H~R~HTGEKPykCpve~CgKsF-~~ks~Lk~H~RtHTGEKPy~C~~e~CGKsF~~ks~LkrH-~R~Ht 1220 (1230)
...|...+.|.+|++.|++++||+|+ .|++.| .+++.|+.|+++| +++||.| ++|||.|.++.+|++| +++|+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~C~--~C~k~F~~~~~~L~~H~~~h-~~k~~~C--~~Cgk~F~~~~~L~~H~~~~H~ 87 (96)
T 2ctd_A 13 PPVYAAGSLEEQWYLEIVDKGSVSCP--TCQAVGRKTIEGLKKHMENC-KQEMFTC--HHCGKQLRSLAGMKYHVMANHN 87 (96)
T ss_dssp CCSSCTTCHHHHHHHHHHHTSCEECT--TTCSCEESSHHHHHHHHHHH-CCCCCCC--SSSCCCCSSHHHHHHHHHHHTC
T ss_pred CCCCCCchHHHHHHHHhcCCCCcCCC--CCCCCcccCHHHHHHHHHHH-CCCCeEC--CCCCCeeCCHHHHHHHhHHhcC
Confidence 45778899999999999999999995 599999 9999999999999 9999999 4799999999999999 99998
Q ss_pred Ccc
Q psy8969 1221 DEF 1223 (1230)
Q Consensus 1221 GE~ 1223 (1230)
++.
T Consensus 88 ~~p 90 (96)
T 2ctd_A 88 SLP 90 (96)
T ss_dssp CCS
T ss_pred CCC
Confidence 764
No 130
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=99.45 E-value=3.4e-14 Score=126.53 Aligned_cols=64 Identities=36% Similarity=0.771 Sum_probs=60.2
Q ss_pred ccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeecccccCccccchhhHHHHhhhccCcccc
Q psy8969 1158 IHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTDEFQM 1225 (1230)
Q Consensus 1158 ~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~~e~CGKsF~~ks~LkrH~R~HtGE~~~ 1225 (1230)
.+++++||+|+ .|++.|.+++.|.+|+++|++++||+|. +|++.|.++.+|.+|+++|+||+.|
T Consensus 11 ~~~~~~~~~C~--~C~k~f~~~~~l~~H~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~kp~ 74 (74)
T 2lce_A 11 MTHSDKPYKCD--RCQASFRYKGNLASHKTVHTGEKPYRCN--ICGAQFNRPANLKTHTRIHSGEKPY 74 (74)
T ss_dssp CCCCCCSBCCT--TSSCCBSCHHHHHHHHHHHCCCCSEECT--TTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred ccCCCCCeECC--CCCceeCCHHHHHHHHHHcCCCCCEECC--CCCchhCCHHHHHHHHHhcCCCCCC
Confidence 57899999995 5999999999999999999999999994 7999999999999999999999864
No 131
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1
Probab=99.45 E-value=2.7e-14 Score=126.55 Aligned_cols=69 Identities=45% Similarity=0.915 Sum_probs=59.6
Q ss_pred hhhhcccc-ccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeecccccCccccchhhHHHHhhhcc
Q psy8969 1150 HHMKVHLR-IHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHT 1220 (1230)
Q Consensus 1150 s~Lk~H~R-~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~~e~CGKsF~~ks~LkrH~R~Ht 1220 (1230)
..|..|.. +|++++||+|+++.|++.|.+++.|.+|+++|++++||.|. +||+.|.++.+|.+|+++|+
T Consensus 4 ~~~~~~~~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~Ht 73 (73)
T 1f2i_G 4 HPMNNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCR--ICMRNFSRSDHLTTHIRTHT 73 (73)
T ss_dssp ----CTTSCCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECT--TTCCEESCHHHHHHHHTTCC
T ss_pred CCccchhhccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECC--CCCchhCCHHHHHHHHHhcC
Confidence 45666754 89999999997446999999999999999999999999994 79999999999999999996
No 132
>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A
Probab=99.44 E-value=4.6e-14 Score=128.16 Aligned_cols=80 Identities=31% Similarity=0.593 Sum_probs=70.1
Q ss_pred ceec--CCCccCccccChhhHHHHHhhccCCCCccccccccccccCCchhHhhhhccccCCCCccCCC---CCcccCChh
Q psy8969 821 PYVC--GEAGCDKSFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDR---CPRSYRQLC 895 (1230)
Q Consensus 821 py~C--~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~~~~C~k~F~~~~~L~~H~~~H~~ekpy~C~~---Cgk~F~~~~ 895 (1230)
||.| +. ||+.|.+.+.|..|+++|++++||.|..+.|++.|.+...|..|+++|++ |.|.. |++.|.+.+
T Consensus 1 p~~C~~~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f~~~~ 75 (85)
T 2j7j_A 1 MYVCHFEN--CGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWT 75 (85)
T ss_dssp CEECCSTT--CCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCEESSHH
T ss_pred CccCCCCC--CCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCccCCHH
Confidence 6888 77 99999999999999999999999999633499999999999999999988 89998 999999999
Q ss_pred hHHhHHhhhc
Q psy8969 896 TLNVHKKTNH 905 (1230)
Q Consensus 896 ~L~~H~k~hh 905 (1230)
.|..|++.||
T Consensus 76 ~l~~H~~~hh 85 (85)
T 2j7j_A 76 LYLKHVAECH 85 (85)
T ss_dssp HHHHHHHHCC
T ss_pred HHHHHHHhcC
Confidence 9999998876
No 133
>1in4_A RUVB, holliday junction DNA helicase RUVB; AAA+-class ATPase, winged-helix domain, ATP hydrolysis, walker A, walker B, sensor 1, sensor 2; HET: ADP; 1.60A {Thermotoga maritima} SCOP: a.4.5.11 c.37.1.20 PDB: 1in5_A* 1in6_A* 1in8_A* 1in7_A* 1j7k_A*
Probab=99.44 E-value=1.7e-12 Score=149.90 Aligned_cols=220 Identities=19% Similarity=0.305 Sum_probs=137.9
Q ss_pred ccccChHHHHHHHHHHHHHhhhcCCCCCceEEEeCCCCCCchHHHHHHHHHhCCCeEEEecCCcchhHHHhhcccccccc
Q psy8969 354 DDHYGMEDVKKRILEFIAVSQLKGTTQGKILCFYGPPGVGKTSIAKSIARALNREYFRFSVGGMSDVAEIKGHRRTYVGA 433 (1230)
Q Consensus 354 ~d~~G~~~vK~~i~e~l~~~~~~~~~~~~~llL~GPPG~GKTslak~iA~~l~~~~~~~~~~~~~d~~~i~g~~~~~~g~ 433 (1230)
++.||++.+++.+...+......+ ..+..++|+||||+||||||++||..++.++...+..-..+
T Consensus 25 ~~~~g~~~~~~~l~~~i~~~~~~~-~~~~~~ll~Gp~G~GKTTLa~~ia~~l~~~~~~~sg~~~~~-------------- 89 (334)
T 1in4_A 25 DEFIGQENVKKKLSLALEAAKMRG-EVLDHVLLAGPPGLGKTTLAHIIASELQTNIHVTSGPVLVK-------------- 89 (334)
T ss_dssp GGCCSCHHHHHHHHHHHHHHHHHT-CCCCCEEEESSTTSSHHHHHHHHHHHHTCCEEEEETTTCCS--------------
T ss_pred HHccCcHHHHHHHHHHHHHHHhcC-CCCCeEEEECCCCCcHHHHHHHHHHHhCCCEEEEechHhcC--------------
Confidence 458899999998887775543333 34467999999999999999999999999887655321111
Q ss_pred CchhHHHHHHhhcCCCCEEEEecccccCCCCCCChhhHHHhhcChhhhhhhh---hhccCccccCCceEEEEecCCCCCC
Q psy8969 434 MPGKVIQCMKKTKTENPLVLIDEVDKIGKGYSGDPASALLEMLDPEQNANFL---DHYLDVPVDLSRVLFICTANVIDTI 510 (1230)
Q Consensus 434 ~~g~i~~~~~~~~~~~pvillDEIDk~~~~~~~~~~~all~~ld~~q~~~f~---d~~~~~~~d~s~v~~I~TaN~~~~I 510 (1230)
.+.+...+.. .....|+||||+|.+.. .....|+..++.....-+. ..--.+...+..+.+|.++|.+..+
T Consensus 90 -~~~l~~~~~~-~~~~~v~~iDE~~~l~~----~~~e~L~~~~~~~~~~i~~~~~~~~~~i~~~l~~~~li~at~~~~~L 163 (334)
T 1in4_A 90 -QGDMAAILTS-LERGDVLFIDEIHRLNK----AVEELLYSAIEDFQIDIMIGKGPSAKSIRIDIQPFTLVGATTRSGLL 163 (334)
T ss_dssp -HHHHHHHHHH-CCTTCEEEEETGGGCCH----HHHHHHHHHHHTSCCCC---------------CCCEEEEEESCGGGS
T ss_pred -HHHHHHHHHH-ccCCCEEEEcchhhcCH----HHHHHHHHHHHhcccceeeccCcccccccccCCCeEEEEecCCcccC
Confidence 1122222211 22456999999998753 2234444332110000000 0000112345567888889999999
Q ss_pred CHhhhcccc-eeecCCCCHHHHHHHHHHhhcchhHHhcCCCCCCcccCHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHH
Q psy8969 511 PEPLRDRME-MIDVSGYVAEEKVAIAAQYLIPQAMKESGLSPEQITLEPSAIQVLIKNYCRESGVRNLQKHIEKVTRKVA 589 (1230)
Q Consensus 511 ~~~L~~R~~-~i~~~~~~~~e~~~i~~~~l~~~~~~~~gl~~~~i~~~~~~~~~li~~~~~e~gvR~l~~~i~~i~r~~~ 589 (1230)
++++++||. .+.+..|+.++...|+++.. ... .+.++++++..|++. ..+..|.+.+.+..+...+.
T Consensus 164 s~~l~sR~~l~~~Ld~~~~~~l~~iL~~~~-----~~~-----~~~~~~~~~~~ia~~--~~G~~R~a~~ll~~~~~~a~ 231 (334)
T 1in4_A 164 SSPLRSRFGIILELDFYTVKELKEIIKRAA-----SLM-----DVEIEDAAAEMIAKR--SRGTPRIAIRLTKRVRDMLT 231 (334)
T ss_dssp CHHHHTTCSEEEECCCCCHHHHHHHHHHHH-----HHT-----TCCBCHHHHHHHHHT--STTCHHHHHHHHHHHHHHHH
T ss_pred CHHHHHhcCceeeCCCCCHHHHHHHHHHHH-----HHc-----CCCcCHHHHHHHHHh--cCCChHHHHHHHHHHHHHHH
Confidence 999999997 46899999999999887753 122 356888988888765 24667877777766544322
Q ss_pred HHHhhcCCCceEechhhhhhhcC
Q psy8969 590 LTIVKKESDKVTVTNDNLSDFVG 612 (1230)
Q Consensus 590 ~~~~~~~~~~~~i~~~~~~~~~~ 612 (1230)
. .+. -.||.+.+.+.++
T Consensus 232 ~---~~~---~~It~~~v~~al~ 248 (334)
T 1in4_A 232 V---VKA---DRINTDIVLKTME 248 (334)
T ss_dssp H---HTC---SSBCHHHHHHHHH
T ss_pred H---cCC---CCcCHHHHHHHHH
Confidence 1 121 1367777766654
No 134
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=99.44 E-value=5.1e-14 Score=123.94 Aligned_cols=64 Identities=27% Similarity=0.567 Sum_probs=47.2
Q ss_pred ccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeecccccCccccchhhHHHHhhhccCcccc
Q psy8969 1158 IHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTDEFQM 1225 (1230)
Q Consensus 1158 ~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~~e~CGKsF~~ks~LkrH~R~HtGE~~~ 1225 (1230)
.|++++||+|+ .|++.|.++..|++|+++|++++||+|. +|++.|.++.+|.+|+++|+++...
T Consensus 3 s~~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~p~ 66 (70)
T 1x5w_A 3 SGSSGHPEKCS--ECSYSCSSKAALRIHERIHCTDRPFKCN--YCSFDTKQPSNLSKHMKKFHGDMSG 66 (70)
T ss_dssp SCCCCCSEECS--SSSCEESSHHHHHHHHGGGCCSCSEECS--SSSCEESSHHHHHHHHHHHHSSSCC
T ss_pred CCCCCCCeECC--CCCcccCCHHHHHHHHHHcCCCCCEeCC--CCCCccCCHHHHHHHHHHHhCCCCC
Confidence 46777777774 4777777777777777777777777773 5777777777777777777776653
No 135
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Probab=99.44 E-value=1.2e-14 Score=143.77 Aligned_cols=115 Identities=13% Similarity=0.213 Sum_probs=93.6
Q ss_pred ccCCCCCCCCCCCCCCCCccChhHHHhhhhcccCCCceecCCCccCcccc------ChhhHHHHHhhccCCCCccccccc
Q psy8969 785 EHTSERPFPCPVLGCDRSFTTSNIRKVHIRTHTGEKPYVCGEAGCDKSFA------SATNYKNHMRIHSGEKPYVCQVRD 858 (1230)
Q Consensus 785 ~ht~ekp~~C~~~~C~k~F~~~~~L~~H~r~H~gekpy~C~~~~Cgk~F~------~~s~L~~H~r~Htgekpy~C~~~~ 858 (1230)
.+.+.++|.|....|...|.....+..|. ....++.+.|+. |++.|. ..+.|..|+ .|++++||.|..
T Consensus 6 ~~~~~k~~~~~~k~~~~~~s~ee~~~~~~-l~~~~~~~~c~~--~~~~~~~~~~~~~~~~l~~h~-~h~~~~~~~C~~-- 79 (129)
T 2wbt_A 6 VDSGSKKYLSNHKGIFIHVTLEELKRYHQ-LTPEQKRLIRAI--VKTLIHNPQLLDESSYLYRLL-ASKAISQFVCPL-- 79 (129)
T ss_dssp CCTTCCGGGGCSSCEEEECCHHHHHHHTT-SCHHHHHHHHHH--HHHHHHCGGGTTTHHHHHHHH-HHHHHCSEECTT--
T ss_pred hcccccccccccCCeeeeecHHhhhcccc-CChhhCcccchh--hhcccCCCcccCCHHHHHHHH-HhCCCCCeECCC--
Confidence 47789999998755555555444433333 334567889988 887776 566677776 699999999986
Q ss_pred cccccCCchhHhhhhccccCCCCccCCCCCcccCChhhHHhHHhhhcCC
Q psy8969 859 CQKRFTEYSSLYKHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRE 907 (1230)
Q Consensus 859 C~k~F~~~~~L~~H~~~H~~ekpy~C~~Cgk~F~~~~~L~~H~k~hh~~ 907 (1230)
|++.|.+...|..|+++| ++||.|+.|++.|.+.+.|..|++.||+.
T Consensus 80 C~k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~~l~~H~~~h~~~ 126 (129)
T 2wbt_A 80 CLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVCKKHNI 126 (129)
T ss_dssp TCCEESSHHHHHHHHHHT--CCCCBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred CCcccCCHhHHHHHHHHC--CCCCCCCCCCcccCCHHHHHHHHHHHCCc
Confidence 999999999999999999 89999999999999999999999999975
No 136
>3pxi_A Negative regulator of genetic competence CLPC/MEC; CLPB, proteolysis, CLPX, HSP100/CLP, AAA+ proteins, PR binding; 6.93A {Bacillus subtilis}
Probab=99.43 E-value=4.9e-13 Score=170.87 Aligned_cols=165 Identities=20% Similarity=0.346 Sum_probs=115.6
Q ss_pred ccccChHHHHHHHHHHHHHhhhcCCCCCceEEEeCCCCCCchHHHHHHHHHh----------CCCeEEEecCCcchhHHH
Q psy8969 354 DDHYGMEDVKKRILEFIAVSQLKGTTQGKILCFYGPPGVGKTSIAKSIARAL----------NREYFRFSVGGMSDVAEI 423 (1230)
Q Consensus 354 ~d~~G~~~vK~~i~e~l~~~~~~~~~~~~~llL~GPPG~GKTslak~iA~~l----------~~~~~~~~~~~~~d~~~i 423 (1230)
++++|.++..+++.+.+.. ..+..+||+||||||||++|++||+.+ +.+++.+++
T Consensus 180 d~iiG~~~~i~~l~~~l~~------~~~~~vLL~G~pGtGKT~la~~la~~l~~~~~p~~l~~~~~~~~~~--------- 244 (758)
T 3pxi_A 180 DPVIGRSKEIQRVIEVLSR------RTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVMTLDM--------- 244 (758)
T ss_dssp CCCCCCHHHHHHHHHHHHC------SSSCEEEEESCTTTTTHHHHHHHHHHHHSSCSCTTTSSCCEECC-----------
T ss_pred CCccCchHHHHHHHHHHhC------CCCCCeEEECCCCCCHHHHHHHHHHHHhcCCCChhhcCCeEEEecc---------
Confidence 4799999999999998753 334568999999999999999999998 778877766
Q ss_pred hhccccccccCchhHHHHHHhhcCCC-CEEEEecccccCCCCCCChhhHHHhhcChhhhhhhhhhccCccccCCceEEEE
Q psy8969 424 KGHRRTYVGAMPGKVIQCMKKTKTEN-PLVLIDEVDKIGKGYSGDPASALLEMLDPEQNANFLDHYLDVPVDLSRVLFIC 502 (1230)
Q Consensus 424 ~g~~~~~~g~~~g~i~~~~~~~~~~~-pvillDEIDk~~~~~~~~~~~all~~ld~~q~~~f~d~~~~~~~d~s~v~~I~ 502 (1230)
| ..|.|+...++...|..+.... .||||| + ..+..+.|+.+|+ ...+.+|+
T Consensus 245 -g--~~~~G~~e~~l~~~~~~~~~~~~~iLfiD-----~---~~~~~~~L~~~l~-----------------~~~v~~I~ 296 (758)
T 3pxi_A 245 -G--TKYRGEFEDRLKKVMDEIRQAGNIILFID-----A---AIDASNILKPSLA-----------------RGELQCIG 296 (758)
T ss_dssp -----------CTTHHHHHHHHHTCCCCEEEEC-----C-----------CCCTT-----------------SSSCEEEE
T ss_pred -c--ccccchHHHHHHHHHHHHHhcCCEEEEEc-----C---chhHHHHHHHHHh-----------------cCCEEEEe
Confidence 1 1467888888888888776554 478888 1 1233344444433 24688999
Q ss_pred ecCCCC-----CCCHhhhcccceeecCCCCHHHHHHHHHHhhcchhHHhcCCCCCCcccCHHHHHHHHHH
Q psy8969 503 TANVID-----TIPEPLRDRMEMIDVSGYVAEEKVAIAAQYLIPQAMKESGLSPEQITLEPSAIQVLIKN 567 (1230)
Q Consensus 503 TaN~~~-----~I~~~L~~R~~~i~~~~~~~~e~~~i~~~~l~~~~~~~~gl~~~~i~~~~~~~~~li~~ 567 (1230)
|||..+ .++++|++||.+|.+..|+.++...|++..+ .+.... ..+.++++++..+++.
T Consensus 297 at~~~~~~~~~~~d~al~rRf~~i~v~~p~~~~~~~il~~~~-~~~~~~-----~~~~i~~~al~~~~~~ 360 (758)
T 3pxi_A 297 ATTLDEYRKYIEKDAALERRFQPIQVDQPSVDESIQILQGLR-DRYEAH-----HRVSITDDAIEAAVKL 360 (758)
T ss_dssp ECCTTTTHHHHTTCSHHHHSEEEEECCCCCHHHHHHHHHHTT-TTSGGG-----SSCSCCHHHHHHHHHH
T ss_pred CCChHHHHHHhhccHHHHhhCcEEEeCCCCHHHHHHHHHHHH-HHHHHh-----cCCCCCHHHHHHHHHH
Confidence 999988 7999999999999999999999999987543 333222 3456788888777643
No 137
>1sxj_E Activator 1 40 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=99.43 E-value=4.8e-13 Score=155.00 Aligned_cols=193 Identities=16% Similarity=0.243 Sum_probs=120.6
Q ss_pred ccccChHHHHHHHHHHHHHhhhcCCCCCceEEEeCCCCCCchHHHHHHHHHhCCCe---EEEecCCcc------------
Q psy8969 354 DDHYGMEDVKKRILEFIAVSQLKGTTQGKILCFYGPPGVGKTSIAKSIARALNREY---FRFSVGGMS------------ 418 (1230)
Q Consensus 354 ~d~~G~~~vK~~i~e~l~~~~~~~~~~~~~llL~GPPG~GKTslak~iA~~l~~~~---~~~~~~~~~------------ 418 (1230)
++++|++.+++.+..++. . ..+.+.++|+||||+||||++++||+.+..+- +.++.....
T Consensus 14 ~~~vg~~~~~~~l~~~~~----~-~~~~~~~ll~Gp~G~GKTtl~~~la~~l~~~~~g~i~~~~~~~~~~~~~~~~~~~~ 88 (354)
T 1sxj_E 14 NALSHNEELTNFLKSLSD----Q-PRDLPHLLLYGPNGTGKKTRCMALLESIFGPGVYRLKIDVRQFVTASNRKLELNVV 88 (354)
T ss_dssp GGCCSCHHHHHHHHTTTT----C-TTCCCCEEEECSTTSSHHHHHHTHHHHHSCTTCCC------------------CCE
T ss_pred HHhcCCHHHHHHHHHHHh----h-CCCCCeEEEECCCCCCHHHHHHHHHHHHcCCCCCeEEecceeecccccccceeeee
Confidence 468899999988877651 1 12333499999999999999999999753221 000000000
Q ss_pred -h--hHHHhhccccccccCch-hHHHHHHhh---------------cCCCCEEEEecccccCCCCCCChhhHHHhhcChh
Q psy8969 419 -D--VAEIKGHRRTYVGAMPG-KVIQCMKKT---------------KTENPLVLIDEVDKIGKGYSGDPASALLEMLDPE 479 (1230)
Q Consensus 419 -d--~~~i~g~~~~~~g~~~g-~i~~~~~~~---------------~~~~pvillDEIDk~~~~~~~~~~~all~~ld~~ 479 (1230)
. ..++.+. ..|...+ .+.+.+... .....||||||+|.+. .+..++|++.|+..
T Consensus 89 ~~~~~~~~~~~---~~~~~~~~~~~~~i~~~~~~~~~~~~~~ls~l~~~~~vlilDE~~~L~----~~~~~~L~~~le~~ 161 (354)
T 1sxj_E 89 SSPYHLEITPS---DMGNNDRIVIQELLKEVAQMEQVDFQDSKDGLAHRYKCVIINEANSLT----KDAQAALRRTMEKY 161 (354)
T ss_dssp ECSSEEEECCC-------CCHHHHHHHHHHHTTTTC------------CCEEEEEECTTSSC----HHHHHHHHHHHHHS
T ss_pred cccceEEecHh---hcCCcchHHHHHHHHHHHHhccccccccccccCCCCeEEEEeCccccC----HHHHHHHHHHHHhh
Confidence 0 0000000 0000000 122222221 1134599999999863 22345566555421
Q ss_pred hhhhhhhhccCccccCCceEEEEecCCCCCCCHhhhcccceeecCCCCHHHHHHHHHHhhcchhHHhcCCCCCCcccC-H
Q psy8969 480 QNANFLDHYLDVPVDLSRVLFICTANVIDTIPEPLRDRMEMIDVSGYVAEEKVAIAAQYLIPQAMKESGLSPEQITLE-P 558 (1230)
Q Consensus 480 q~~~f~d~~~~~~~d~s~v~~I~TaN~~~~I~~~L~~R~~~i~~~~~~~~e~~~i~~~~l~~~~~~~~gl~~~~i~~~-~ 558 (1230)
..++.||++||.++.++++|++|+.++.+.+++.++...++.+.+ .+. .+.++ +
T Consensus 162 ---------------~~~~~~Il~t~~~~~l~~~l~sR~~~~~~~~~~~~~~~~~l~~~~-----~~~-----~~~~~~~ 216 (354)
T 1sxj_E 162 ---------------SKNIRLIMVCDSMSPIIAPIKSQCLLIRCPAPSDSEISTILSDVV-----TNE-----RIQLETK 216 (354)
T ss_dssp ---------------TTTEEEEEEESCSCSSCHHHHTTSEEEECCCCCHHHHHHHHHHHH-----HHH-----TCEECCS
T ss_pred ---------------cCCCEEEEEeCCHHHHHHHHHhhceEEecCCcCHHHHHHHHHHHH-----HHc-----CCCCCcH
Confidence 136789999999999999999999999999999999888877654 233 34677 8
Q ss_pred HHHHHHHHHhhhhhhHHHHHHHHHHHH
Q psy8969 559 SAIQVLIKNYCRESGVRNLQKHIEKVT 585 (1230)
Q Consensus 559 ~~~~~li~~~~~e~gvR~l~~~i~~i~ 585 (1230)
+++..|++. .++++|.+...++.+.
T Consensus 217 ~~l~~i~~~--~~G~~r~a~~~l~~~~ 241 (354)
T 1sxj_E 217 DILKRIAQA--SNGNLRVSLLMLESMA 241 (354)
T ss_dssp HHHHHHHHH--HTTCHHHHHHHHTHHH
T ss_pred HHHHHHHHH--cCCCHHHHHHHHHHHH
Confidence 888888855 3778998888877654
No 138
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=99.42 E-value=6.2e-14 Score=129.07 Aligned_cols=63 Identities=30% Similarity=0.623 Sum_probs=58.0
Q ss_pred cccCCCCCccCCCCCCCCCCchhhhccccccCCCCcccCCcccccccccCchhhhhhc-ccccCCC
Q psy8969 1129 KKSTSSENNVCPECKKTFSSAHHMKVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHI-RTHTGEK 1193 (1230)
Q Consensus 1129 ~~~t~~kpy~C~~CgK~F~s~s~Lk~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~-RtHTGEK 1193 (1230)
..+...++|.|++|||.|.+.++|.+|+++|+|+|||+|+ +|+|+|.++..|++|+ ++|++|.
T Consensus 21 ~~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~~H~~E~ 84 (85)
T 2lv2_A 21 GLSASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCK--YCPATFYSSPGLTRHINKCHPSEN 84 (85)
T ss_dssp SSCCCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECT--TSSCEESSHHHHHHHHHTTCTTCC
T ss_pred CCCCCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCC--CCCCEeCCHHHHHHhCcccCcCCC
Confidence 4456778999999999999999999999999999999995 6999999999999997 6899885
No 139
>1jr3_A DNA polymerase III subunit gamma; processivity, processivity clamp, clamp loader, AAA+ ATPase, transferase; HET: DNA; 2.70A {Escherichia coli} SCOP: a.80.1.1 c.37.1.20 PDB: 1xxh_B* 3glh_B* 3glf_B* 3gli_B* 3glg_B* 1xxi_B*
Probab=99.42 E-value=1.1e-12 Score=152.66 Aligned_cols=214 Identities=23% Similarity=0.301 Sum_probs=138.7
Q ss_pred ccccChHHHHHHHHHHHHHhhhcCCCCCceEEEeCCCCCCchHHHHHHHHHhCCCeEE--EecCCcchhHHHhhcc-ccc
Q psy8969 354 DDHYGMEDVKKRILEFIAVSQLKGTTQGKILCFYGPPGVGKTSIAKSIARALNREYFR--FSVGGMSDVAEIKGHR-RTY 430 (1230)
Q Consensus 354 ~d~~G~~~vK~~i~e~l~~~~~~~~~~~~~llL~GPPG~GKTslak~iA~~l~~~~~~--~~~~~~~d~~~i~g~~-~~~ 430 (1230)
++++|.+++++.+...+... ..+..++|+||||+|||++|+++|+.++..... ..++.......+.... ..+
T Consensus 16 ~~~vg~~~~~~~L~~~l~~~-----~~~~~~ll~G~~G~GKT~la~~la~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (373)
T 1jr3_A 16 ADVVGQEHVLTALANGLSLG-----RIHHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIEQGRFVDL 90 (373)
T ss_dssp TTSCSCHHHHHHHHHHHHHT-----CCCSEEEEESCTTSSHHHHHHHHHHHHSCTTCSCSSCCSSSHHHHHHHTSCCSSC
T ss_pred hhccCcHHHHHHHHHHHHhC-----CCCeEEEEECCCCCCHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhccCCCce
Confidence 46999999999998887431 234578999999999999999999999753211 1111111111111000 000
Q ss_pred --cc----cCchhHHHHHHhhcC-----CCCEEEEecccccCCCCCCChhhHHHhhcChhhhhhhhhhccCccccCCceE
Q psy8969 431 --VG----AMPGKVIQCMKKTKT-----ENPLVLIDEVDKIGKGYSGDPASALLEMLDPEQNANFLDHYLDVPVDLSRVL 499 (1230)
Q Consensus 431 --~g----~~~g~i~~~~~~~~~-----~~pvillDEIDk~~~~~~~~~~~all~~ld~~q~~~f~d~~~~~~~d~s~v~ 499 (1230)
+. .....+.+.+..+.. ...||||||+|.+.. +..++|+..++. ...+++
T Consensus 91 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vliiDe~~~l~~----~~~~~Ll~~le~---------------~~~~~~ 151 (373)
T 1jr3_A 91 IEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYLIDEVHMLSR----HSFNALLKTLEE---------------PPEHVK 151 (373)
T ss_dssp EEEETTCSCCSSCHHHHHHHTTSCCSSSSSEEEEEECGGGSCH----HHHHHHHHHHHS---------------CCSSEE
T ss_pred EEecccccCCHHHHHHHHHHHhhccccCCeEEEEEECcchhcH----HHHHHHHHHHhc---------------CCCceE
Confidence 00 011233444443332 235899999999743 234556655532 124788
Q ss_pred EEEecCCCCCCCHhhhcccceeecCCCCHHHHHHHHHHhhcchhHHhcCCCCCCcccCHHHHHHHHHHhhhhhhHHHHHH
Q psy8969 500 FICTANVIDTIPEPLRDRMEMIDVSGYVAEEKVAIAAQYLIPQAMKESGLSPEQITLEPSAIQVLIKNYCRESGVRNLQK 579 (1230)
Q Consensus 500 ~I~TaN~~~~I~~~L~~R~~~i~~~~~~~~e~~~i~~~~l~~~~~~~~gl~~~~i~~~~~~~~~li~~~~~e~gvR~l~~ 579 (1230)
||+++|....+++++++|+.++.+.+++.++...++.+++ .+.| +.++++++..+++. + ++.+|.+..
T Consensus 152 ~Il~~~~~~~l~~~l~sr~~~i~~~~l~~~~~~~~l~~~~-----~~~~-----~~~~~~a~~~l~~~-~-~G~~r~~~~ 219 (373)
T 1jr3_A 152 FLLATTDPQKLPVTILSRCLQFHLKALDVEQIRHQLEHIL-----NEEH-----IAHEPRALQLLARA-A-EGSLRDALS 219 (373)
T ss_dssp EEEEESCGGGSCHHHHTTSEEEECCCCCHHHHHHHHHHHH-----HHHT-----CCBCHHHHHHHHHH-S-SSCHHHHHH
T ss_pred EEEEeCChHhCcHHHHhheeEeeCCCCCHHHHHHHHHHHH-----HHcC-----CCCCHHHHHHHHHH-C-CCCHHHHHH
Confidence 9999999999999999999999999999999888877654 2333 45788888887754 3 678888877
Q ss_pred HHHHHHHHHHHHHhhcCCCceEechhhhhhhcCC
Q psy8969 580 HIEKVTRKVALTIVKKESDKVTVTNDNLSDFVGK 613 (1230)
Q Consensus 580 ~i~~i~r~~~~~~~~~~~~~~~i~~~~~~~~~~~ 613 (1230)
.++.++.. .. . .|+.+++.++++.
T Consensus 220 ~l~~~~~~------~~--~--~i~~~~v~~~~~~ 243 (373)
T 1jr3_A 220 LTDQAIAS------GD--G--QVSTQAVSAMLGT 243 (373)
T ss_dssp HHHHHHHH------TT--T--CBCHHHHHHHTTC
T ss_pred HHHHHHHh------cC--C--cccHHHHHHHhCC
Confidence 77665321 11 1 3788888877763
No 140
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=99.42 E-value=7.4e-15 Score=135.43 Aligned_cols=83 Identities=23% Similarity=0.555 Sum_probs=62.9
Q ss_pred CCceecCCCccCccccChhhHHHHHhhccCCCCccccccccccccCCchhHhhhhccccCCCCccCCCCCcccCChhhHH
Q psy8969 819 EKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRSYRQLCTLN 898 (1230)
Q Consensus 819 ekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~~~~C~k~F~~~~~L~~H~~~H~~ekpy~C~~Cgk~F~~~~~L~ 898 (1230)
++||.|.. |++.|.+.+.|..|+++|++++||.|.. |++.|.+...|..|+++|++ .+|.|+.|++.|.+...|.
T Consensus 1 ek~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~h~~-~~~~c~~C~~~f~~~~~L~ 75 (88)
T 1llm_C 1 MKPFQCRI--CMRNFSRSDHLTTHIRTHTGEKPFACDI--CGRKFARSDERKRHRDIQHI-LPILEDKVEELLSKNYHLE 75 (88)
T ss_dssp CCCEECTT--TCCEESCHHHHHHHHHHHHCCCCEECTT--TCCEESSHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcCCC--CCCccCCHHHHHHHHHHcCCCCCccCCC--CCCccCCHHHHHHHHHHhCC-CcchHHHHHHHHHHHhhhH
Confidence 46777777 7777777777777777777777777764 77777777777777777764 6777777777777777777
Q ss_pred hHHhhhcC
Q psy8969 899 VHKKTNHR 906 (1230)
Q Consensus 899 ~H~k~hh~ 906 (1230)
.|++.+|.
T Consensus 76 ~H~~~~h~ 83 (88)
T 1llm_C 76 NEVARLKK 83 (88)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77777664
No 141
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=99.42 E-value=4.3e-14 Score=124.41 Aligned_cols=64 Identities=28% Similarity=0.571 Sum_probs=60.4
Q ss_pred ccCCCCCccCCCCCCCCCCchhhhccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCE
Q psy8969 1130 KSTSSENNVCPECKKTFSSAHHMKVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPY 1195 (1230)
Q Consensus 1130 ~~t~~kpy~C~~CgK~F~s~s~Lk~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy 1195 (1230)
.++++++|.|+.|++.|.+.++|.+|+++|++++||+|+ .|++.|.++..|.+|+++|++++|.
T Consensus 3 s~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~p~ 66 (70)
T 1x5w_A 3 SGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCN--YCSFDTKQPSNLSKHMKKFHGDMSG 66 (70)
T ss_dssp SCCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECS--SSSCEESSHHHHHHHHHHHHSSSCC
T ss_pred CCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCC--CCCCccCCHHHHHHHHHHHhCCCCC
Confidence 357789999999999999999999999999999999995 5999999999999999999999985
No 142
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=99.41 E-value=5.4e-14 Score=124.60 Aligned_cols=66 Identities=35% Similarity=0.592 Sum_probs=61.2
Q ss_pred cccccCCCCCccCCCCCCCCCCchhhhccccccCCCCcccCCcccccccccCchhhhhhcccccCCCC
Q psy8969 1127 TVKKSTSSENNVCPECKKTFSSAHHMKVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKP 1194 (1230)
Q Consensus 1127 ~~~~~t~~kpy~C~~CgK~F~s~s~Lk~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKP 1194 (1230)
..+.|+++++|.|+.|++.|.+.+.|.+|+++|++++||+|+ .|++.|.++..|++|+++|+++.+
T Consensus 5 ~~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~--~C~~~f~~~~~L~~H~~~H~~~~~ 70 (72)
T 1x6e_A 5 SSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCL--ECGKAFSQNSGLINHQRIHTSGPS 70 (72)
T ss_dssp CCCTTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECS--SSCCEESSHHHHHHHHHHHHSSSS
T ss_pred CCcccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECC--CCCcccCCHHHHHHHHHhcCCCCC
Confidence 345678999999999999999999999999999999999996 599999999999999999998864
No 143
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Probab=99.41 E-value=4.6e-15 Score=146.74 Aligned_cols=82 Identities=24% Similarity=0.407 Sum_probs=71.2
Q ss_pred CCccCCCCCCCCC------CchhhhccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeecccccCccccc
Q psy8969 1135 ENNVCPECKKTFS------SAHHMKVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKT 1208 (1230)
Q Consensus 1135 kpy~C~~CgK~F~------s~s~Lk~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~~e~CGKsF~~ 1208 (1230)
+++.|+.|++.|. ..+.|..|+ .|+|++||+|+ .|+++|.+++.|++|+++| ++||.|. +||+.|.+
T Consensus 40 ~~~~c~~~~~~~~~~~~~~~~~~l~~h~-~h~~~~~~~C~--~C~k~f~~~~~l~~H~~~H--~~~~~C~--~C~k~f~~ 112 (129)
T 2wbt_A 40 KRLIRAIVKTLIHNPQLLDESSYLYRLL-ASKAISQFVCP--LCLMPFSSSVSLKQHIRYT--EHTKVCP--VCKKEFTS 112 (129)
T ss_dssp HHHHHHHHHHHHHCGGGTTTHHHHHHHH-HHHHHCSEECT--TTCCEESSHHHHHHHHHHT--CCCCBCT--TTCCBCSS
T ss_pred CcccchhhhcccCCCcccCCHHHHHHHH-HhCCCCCeECC--CCCcccCCHhHHHHHHHHC--CCCCCCC--CCCcccCC
Confidence 3456777766554 667777777 69999999995 5999999999999999999 9999994 79999999
Q ss_pred hhhHHHHhhhccCcc
Q psy8969 1209 SGDLQKHVRTHTDEF 1223 (1230)
Q Consensus 1209 ks~LkrH~R~HtGE~ 1223 (1230)
+.+|.+|+++|||+.
T Consensus 113 ~~~l~~H~~~h~~~~ 127 (129)
T 2wbt_A 113 TDSALDHVCKKHNIC 127 (129)
T ss_dssp HHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHCCcc
Confidence 999999999999873
No 144
>1fnn_A CDC6P, cell division control protein 6; ORC1, AAA protein, DNA replication initation factor, cell cycle control factor; HET: ADP; 2.00A {Pyrobaculum aerophilum} SCOP: a.4.5.11 c.37.1.20
Probab=99.41 E-value=2.2e-12 Score=150.81 Aligned_cols=210 Identities=10% Similarity=0.078 Sum_probs=134.8
Q ss_pred ccccChHHHHHHHHHHHHHhhhcCCCCCceEEEeCCCCCCchHHHHHHHHHh----CCCeEEEecCCcchhHHHh-----
Q psy8969 354 DDHYGMEDVKKRILEFIAVSQLKGTTQGKILCFYGPPGVGKTSIAKSIARAL----NREYFRFSVGGMSDVAEIK----- 424 (1230)
Q Consensus 354 ~d~~G~~~vK~~i~e~l~~~~~~~~~~~~~llL~GPPG~GKTslak~iA~~l----~~~~~~~~~~~~~d~~~i~----- 424 (1230)
++++|.++..++|.+++..........++.++|+||||+|||++++++++.+ +.+++.+++....+...+.
T Consensus 17 ~~l~gr~~~~~~l~~~l~~~~~~~~~~~~~~li~G~~G~GKTtl~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~ 96 (389)
T 1fnn_A 17 KRLPHREQQLQQLDILLGNWLRNPGHHYPRATLLGRPGTGKTVTLRKLWELYKDKTTARFVYINGFIYRNFTAIIGEIAR 96 (389)
T ss_dssp SCCTTCHHHHHHHHHHHHHHHHSTTSSCCEEEEECCTTSSHHHHHHHHHHHHTTSCCCEEEEEETTTCCSHHHHHHHHHH
T ss_pred CCCCChHHHHHHHHHHHHHHHcCCCCCCCeEEEECCCCCCHHHHHHHHHHHHhhhcCeeEEEEeCccCCCHHHHHHHHHH
Confidence 5799999999999998854322222223489999999999999999999999 5677888866554322211
Q ss_pred --hccccccccCchhHHHHHHh---hcCCCCEEEEecccccCCCCCCChhhHHHhhcChhhhhhhhhhccCccccCCceE
Q psy8969 425 --GHRRTYVGAMPGKVIQCMKK---TKTENPLVLIDEVDKIGKGYSGDPASALLEMLDPEQNANFLDHYLDVPVDLSRVL 499 (1230)
Q Consensus 425 --g~~~~~~g~~~g~i~~~~~~---~~~~~pvillDEIDk~~~~~~~~~~~all~~ld~~q~~~f~d~~~~~~~d~s~v~ 499 (1230)
|......|.....+.+.+.. ......||||||+|.+. .+...+|+.+++.... ....++.
T Consensus 97 ~l~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vlilDE~~~l~----~~~~~~L~~~~~~~~~-----------~~~~~~~ 161 (389)
T 1fnn_A 97 SLNIPFPRRGLSRDEFLALLVEHLRERDLYMFLVLDDAFNLA----PDILSTFIRLGQEADK-----------LGAFRIA 161 (389)
T ss_dssp HTTCCCCSSCCCHHHHHHHHHHHHHHTTCCEEEEEETGGGSC----HHHHHHHHHHTTCHHH-----------HSSCCEE
T ss_pred HhCccCCCCCCCHHHHHHHHHHHHhhcCCeEEEEEECccccc----hHHHHHHHHHHHhCCC-----------CCcCCEE
Confidence 11100112222233332221 11223488899999871 2233445554432110 0014788
Q ss_pred EEEecCCC---CCCCHhhhcccc--eeecCCCCHHHHHHHHHHhhcchhHHhcCCCCCCcccCHHHHHHHHHHhhh----
Q psy8969 500 FICTANVI---DTIPEPLRDRME--MIDVSGYVAEEKVAIAAQYLIPQAMKESGLSPEQITLEPSAIQVLIKNYCR---- 570 (1230)
Q Consensus 500 ~I~TaN~~---~~I~~~L~~R~~--~i~~~~~~~~e~~~i~~~~l~~~~~~~~gl~~~~i~~~~~~~~~li~~~~~---- 570 (1230)
||+++|.. +.+++++++||. .|.+++|+.++...++...+- ..+ . ...++++++..+.+...+
T Consensus 162 iI~~~~~~~~~~~l~~~~~~r~~~~~i~~~pl~~~~~~~~l~~~~~-----~~~-~--~~~~~~~~~~~l~~~~~~~~~~ 233 (389)
T 1fnn_A 162 LVIVGHNDAVLNNLDPSTRGIMGKYVIRFSPYTKDQIFDILLDRAK-----AGL-A--EGSYSEDILQMIADITGAQTPL 233 (389)
T ss_dssp EEEEESSTHHHHTSCHHHHHHHTTCEEECCCCBHHHHHHHHHHHHH-----HHB-C--TTSSCHHHHHHHHHHHSBSSTT
T ss_pred EEEEECCchHHHHhCHHhhhcCCCceEEeCCCCHHHHHHHHHHHHH-----hhc-C--CCCCCHHHHHHHHHHHhhcccC
Confidence 99999988 789999999998 699999999999888877552 111 1 236788988888765433
Q ss_pred ---hhhHHHHHHHHHHHHH
Q psy8969 571 ---ESGVRNLQKHIEKVTR 586 (1230)
Q Consensus 571 ---e~gvR~l~~~i~~i~r 586 (1230)
.+.+|.+...+..+..
T Consensus 234 ~~~~G~~r~~~~~l~~a~~ 252 (389)
T 1fnn_A 234 DTNRGDARLAIDILYRSAY 252 (389)
T ss_dssp CTTSCCHHHHHHHHHHHHH
T ss_pred CCCCCcHHHHHHHHHHHHH
Confidence 3567887777665443
No 145
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=99.41 E-value=6.1e-14 Score=121.75 Aligned_cols=62 Identities=26% Similarity=0.543 Sum_probs=57.1
Q ss_pred ccccCCCCcccCCcccccccccCchhhhhhccc-c-cCCCCEeecccccCccccchhhHHHHhhhccC
Q psy8969 1156 LRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRT-H-TGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTD 1221 (1230)
Q Consensus 1156 ~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~Rt-H-TGEKPy~C~~e~CGKsF~~ks~LkrH~R~HtG 1221 (1230)
+++|+|++||+|+ .|++.|.+++.|.+|+++ | ++++||.|+ .||+.|.++.+|.+|+++|||
T Consensus 2 ~~~h~~~k~~~C~--~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~--~C~k~f~~~~~L~~H~~~~H~ 65 (66)
T 2drp_A 2 EFTKEGEHTYRCK--VCSRVYTHISNFCRHYVTSHKRNVKVYPCP--FCFKEFTRKDNMTAHVKIIHK 65 (66)
T ss_dssp -CEEEETTEEECT--TTCCEESSHHHHHHHHHHHSSSSCCCEECT--TTCCEESCHHHHHHHHHHHTC
T ss_pred ccccCCCcceECC--CCcchhCCHHHHHHHHHHHcCCCCcCeECC--CCCCccCCHHHHHHHHHHHcC
Confidence 4789999999995 599999999999999998 8 699999994 799999999999999999987
No 146
>1qvr_A CLPB protein; coiled coil, AAA ATPase, chaperone; HET: ANP; 3.00A {Thermus thermophilus} SCOP: a.174.1.1 c.37.1.20 c.37.1.20
Probab=99.39 E-value=6.6e-13 Score=171.70 Aligned_cols=185 Identities=18% Similarity=0.252 Sum_probs=119.0
Q ss_pred HHhhhhcccccChHHHHHHHHHHHHHhhhcCCCCCceEEEeCCCCCCchHHHHHHHHHh----------CCCeEEEecCC
Q psy8969 347 QAAKILDDDHYGMEDVKKRILEFIAVSQLKGTTQGKILCFYGPPGVGKTSIAKSIARAL----------NREYFRFSVGG 416 (1230)
Q Consensus 347 ~~~~~l~~d~~G~~~vK~~i~e~l~~~~~~~~~~~~~llL~GPPG~GKTslak~iA~~l----------~~~~~~~~~~~ 416 (1230)
.++..--++++|.++..+++.+.+.. ..+..++|+||||||||++|++||..+ +.+++.++++.
T Consensus 163 ~~r~~~ld~viGr~~~i~~l~~~l~~------~~~~~vlL~G~pG~GKT~la~~la~~l~~~~~p~~l~~~~~~~l~~~~ 236 (854)
T 1qvr_A 163 LAAEGKLDPVIGRDEEIRRVIQILLR------RTKNNPVLIGEPGVGKTAIVEGLAQRIVKGDVPEGLKGKRIVSLQMGS 236 (854)
T ss_dssp HHHTTCSCCCCSCHHHHHHHHHHHHC------SSCCCCEEEECTTSCHHHHHHHHHHHHHHTCSCTTSTTCEEEEECC--
T ss_pred HHhcCCCcccCCcHHHHHHHHHHHhc------CCCCceEEEcCCCCCHHHHHHHHHHHHhcCCCchhhcCCeEEEeehHH
Confidence 34444446799999999999998742 234568899999999999999999998 88888888766
Q ss_pred cchhHHHhhccccccccCchhHHHHHHhhcCC--CCEEEEecccccCCCCC----CChhhHHHhhcChhhhhhhhhhccC
Q psy8969 417 MSDVAEIKGHRRTYVGAMPGKVIQCMKKTKTE--NPLVLIDEVDKIGKGYS----GDPASALLEMLDPEQNANFLDHYLD 490 (1230)
Q Consensus 417 ~~d~~~i~g~~~~~~g~~~g~i~~~~~~~~~~--~pvillDEIDk~~~~~~----~~~~~all~~ld~~q~~~f~d~~~~ 490 (1230)
+... ..|.|.....+...+..+... +.||||||||.+..... .+..+.|..+|
T Consensus 237 l~~g-------~~~~g~~~~~l~~~~~~~~~~~~~~iL~IDEi~~l~~~~~~~g~~~~~~~L~~~l-------------- 295 (854)
T 1qvr_A 237 LLAG-------AKYRGEFEERLKAVIQEVVQSQGEVILFIDELHTVVGAGKAEGAVDAGNMLKPAL-------------- 295 (854)
T ss_dssp ----------------CHHHHHHHHHHHHHTTCSSEEEEECCC-------------------HHHH--------------
T ss_pred hhcc-------CccchHHHHHHHHHHHHHHhcCCCeEEEEecHHHHhccCCccchHHHHHHHHHHH--------------
Confidence 5431 135566666666666665543 34888999999853221 11222233332
Q ss_pred ccccCCceEEEEecCCCC----CCCHhhhcccceeecCCCCHHHHHHHHHHhhcchhHHhcCCCCCCcccCHHHHHHHHH
Q psy8969 491 VPVDLSRVLFICTANVID----TIPEPLRDRMEMIDVSGYVAEEKVAIAAQYLIPQAMKESGLSPEQITLEPSAIQVLIK 566 (1230)
Q Consensus 491 ~~~d~s~v~~I~TaN~~~----~I~~~L~~R~~~i~~~~~~~~e~~~i~~~~l~~~~~~~~gl~~~~i~~~~~~~~~li~ 566 (1230)
+...+.+|+|||..+ .++++|++||.+|.+..|+.++...|++..+ .+....+ .+.++++++..+++
T Consensus 296 ---~~~~i~~I~at~~~~~~~~~~d~aL~rRf~~i~l~~p~~~e~~~iL~~~~-~~~~~~~-----~~~i~~~al~~~~~ 366 (854)
T 1qvr_A 296 ---ARGELRLIGATTLDEYREIEKDPALERRFQPVYVDEPTVEETISILRGLK-EKYEVHH-----GVRISDSAIIAAAT 366 (854)
T ss_dssp ---HTTCCCEEEEECHHHHHHHTTCTTTCSCCCCEEECCCCHHHHHHHHHHHH-HHHHHHT-----TCEECHHHHHHHHH
T ss_pred ---hCCCeEEEEecCchHHhhhccCHHHHhCCceEEeCCCCHHHHHHHHHhhh-hhhhhhc-----CCCCCHHHHHHHHH
Confidence 124677888888664 5899999999999999999999999986543 3333233 46688888887765
Q ss_pred H
Q psy8969 567 N 567 (1230)
Q Consensus 567 ~ 567 (1230)
.
T Consensus 367 l 367 (854)
T 1qvr_A 367 L 367 (854)
T ss_dssp H
T ss_pred H
Confidence 3
No 147
>1a5t_A Delta prime, HOLB; zinc finger, DNA replication; 2.20A {Escherichia coli K12} SCOP: a.80.1.1 c.37.1.20 PDB: 1jr3_E* 1xxh_E* 1xxi_E* 3glf_E* 3glg_E* 3glh_E* 3gli_E*
Probab=99.38 E-value=4.1e-12 Score=146.66 Aligned_cols=184 Identities=13% Similarity=0.137 Sum_probs=115.0
Q ss_pred hHHHHHHHHHHHHHhhhcCCCCCceEEEeCCCCCCchHHHHHHHHHhCCCeEEE--ecCCcchhHHH--hhccc-cccc-
Q psy8969 359 MEDVKKRILEFIAVSQLKGTTQGKILCFYGPPGVGKTSIAKSIARALNREYFRF--SVGGMSDVAEI--KGHRR-TYVG- 432 (1230)
Q Consensus 359 ~~~vK~~i~e~l~~~~~~~~~~~~~llL~GPPG~GKTslak~iA~~l~~~~~~~--~~~~~~d~~~i--~g~~~-~~~g- 432 (1230)
++++.+.+...+. ....+..+||+||||+|||++|+++|+.+..+...- .++.......+ ..|.. .++.
T Consensus 7 ~~~~~~~l~~~i~-----~~~~~~a~L~~G~~G~GKt~~a~~la~~l~~~~~~~~~~c~~c~~c~~~~~~~~~d~~~~~~ 81 (334)
T 1a5t_A 7 LRPDFEKLVASYQ-----AGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTLAP 81 (334)
T ss_dssp GHHHHHHHHHHHH-----TTCCCSEEEEECCTTSCHHHHHHHHHHHHTCSSCBTTBCCSCSHHHHHHHHTCCTTEEEECC
T ss_pred hHHHHHHHHHHHH-----cCCcceeEEEECCCCchHHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHhcCCCCCEEEEec
Confidence 4566666666553 223456799999999999999999999987543110 00100000000 00000 0010
Q ss_pred ----c--CchhHHHHHHhhcC-----CCCEEEEecccccCCCCCCChhhHHHhhcChhhhhhhhhhccCccccCCceEEE
Q psy8969 433 ----A--MPGKVIQCMKKTKT-----ENPLVLIDEVDKIGKGYSGDPASALLEMLDPEQNANFLDHYLDVPVDLSRVLFI 501 (1230)
Q Consensus 433 ----~--~~g~i~~~~~~~~~-----~~pvillDEIDk~~~~~~~~~~~all~~ld~~q~~~f~d~~~~~~~d~s~v~~I 501 (1230)
. .-..|++.+..+.. ...||+|||+|++.. +..++||..|+. ...+++||
T Consensus 82 ~~~~~~~~i~~ir~l~~~~~~~~~~~~~kvviIdead~l~~----~a~naLLk~lEe---------------p~~~~~~I 142 (334)
T 1a5t_A 82 EKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTD----AAANALLKTLEE---------------PPAETWFF 142 (334)
T ss_dssp CTTCSSBCHHHHHHHHHHTTSCCTTSSCEEEEESCGGGBCH----HHHHHHHHHHTS---------------CCTTEEEE
T ss_pred cccCCCCCHHHHHHHHHHHhhccccCCcEEEEECchhhcCH----HHHHHHHHHhcC---------------CCCCeEEE
Confidence 0 01123333333322 245999999999853 346778877753 12578999
Q ss_pred EecCCCCCCCHhhhcccceeecCCCCHHHHHHHHHHhhcchhHHhcCCCCCCcccCHHHHHHHHHHhhhhhhHHHHHHHH
Q psy8969 502 CTANVIDTIPEPLRDRMEMIDVSGYVAEEKVAIAAQYLIPQAMKESGLSPEQITLEPSAIQVLIKNYCRESGVRNLQKHI 581 (1230)
Q Consensus 502 ~TaN~~~~I~~~L~~R~~~i~~~~~~~~e~~~i~~~~l~~~~~~~~gl~~~~i~~~~~~~~~li~~~~~e~gvR~l~~~i 581 (1230)
++||.++.|++++++|+.++.+.+++.++...++.+.. .++++++..+++. .++++|.+...+
T Consensus 143 l~t~~~~~l~~ti~SRc~~~~~~~~~~~~~~~~L~~~~---------------~~~~~~~~~l~~~--s~G~~r~a~~~l 205 (334)
T 1a5t_A 143 LATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREV---------------TMSQDALLAALRL--SAGSPGAALALF 205 (334)
T ss_dssp EEESCGGGSCHHHHTTSEEEECCCCCHHHHHHHHHHHC---------------CCCHHHHHHHHHH--TTTCHHHHHHTT
T ss_pred EEeCChHhCcHHHhhcceeeeCCCCCHHHHHHHHHHhc---------------CCCHHHHHHHHHH--cCCCHHHHHHHh
Confidence 99999999999999999999999999999877765532 4567777777644 355666665554
Q ss_pred HH
Q psy8969 582 EK 583 (1230)
Q Consensus 582 ~~ 583 (1230)
+.
T Consensus 206 ~~ 207 (334)
T 1a5t_A 206 QG 207 (334)
T ss_dssp SS
T ss_pred cc
Confidence 43
No 148
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=99.36 E-value=2e-13 Score=114.71 Aligned_cols=57 Identities=40% Similarity=0.865 Sum_probs=45.0
Q ss_pred CCCcccCCcccccccccCchhhhhhcccccCCCCEeecccccCccccchhhHHHHhhhccC
Q psy8969 1161 GIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTD 1221 (1230)
Q Consensus 1161 GEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~~e~CGKsF~~ks~LkrH~R~HtG 1221 (1230)
|++||+|+ .|++.|.+.+.|.+|+++|++++||.|+ +|++.|.++.+|.+|+++|++
T Consensus 1 g~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~hh~ 57 (57)
T 3uk3_C 1 GSSSRECS--YCGKFFRSNYYLNIHLRTHTGEKPYKCE--FCEYAAAQKTSLRYHLERHHK 57 (57)
T ss_dssp ----CBCT--TTCCBCSCHHHHHHHHHHHHCCCCEECS--SSSCEESSHHHHHHHHHHHC-
T ss_pred CCCCccCC--CCcchhCChHHHHHHHHHcCCCCCcCCC--CCcchhCCHHHHHHHHHHhcC
Confidence 57888885 5888888888888888888888888884 699999999999999888875
No 149
>1r6b_X CLPA protein; AAA+, N-terminal domain, CLPS, crystal, binding mechanism, hydrolase; HET: ADP; 2.25A {Escherichia coli} SCOP: a.174.1.1 c.37.1.20 c.37.1.20 PDB: 1ksf_X*
Probab=99.36 E-value=5.7e-12 Score=161.07 Aligned_cols=188 Identities=20% Similarity=0.303 Sum_probs=127.9
Q ss_pred HhhhhcccccChHHHHHHHHHHHHHhhhcCCCCCceEEEeCCCCCCchHHHHHHHHHh----------CCCeEEEecCCc
Q psy8969 348 AAKILDDDHYGMEDVKKRILEFIAVSQLKGTTQGKILCFYGPPGVGKTSIAKSIARAL----------NREYFRFSVGGM 417 (1230)
Q Consensus 348 ~~~~l~~d~~G~~~vK~~i~e~l~~~~~~~~~~~~~llL~GPPG~GKTslak~iA~~l----------~~~~~~~~~~~~ 417 (1230)
++.---++++|.++..+++.+.+.. ..+..++|+||||||||++|++||..+ +..++.++++.+
T Consensus 180 ~~~~~~d~~iGr~~~i~~l~~~l~~------~~~~~vlL~G~~GtGKT~la~~la~~l~~~~v~~~~~~~~~~~~~~~~l 253 (758)
T 1r6b_X 180 ARVGGIDPLIGREKELERAIQVLCR------RRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSL 253 (758)
T ss_dssp HHTTCSCCCCSCHHHHHHHHHHHTS------SSSCEEEEECCTTSSHHHHHHHHHHHHHHTCSCGGGTTCEEEECCCC--
T ss_pred HhcCCCCCccCCHHHHHHHHHHHhc------cCCCCeEEEcCCCCCHHHHHHHHHHHHHhCCCChhhcCCEEEEEcHHHH
Confidence 4444446799999999999888742 245678999999999999999999987 555666655443
Q ss_pred chhHHHhhccccccccCchhHHHHHHhhcCC-CCEEEEecccccCCCCCCC-hhhHHHhhcChhhhhhhhhhccCccccC
Q psy8969 418 SDVAEIKGHRRTYVGAMPGKVIQCMKKTKTE-NPLVLIDEVDKIGKGYSGD-PASALLEMLDPEQNANFLDHYLDVPVDL 495 (1230)
Q Consensus 418 ~d~~~i~g~~~~~~g~~~g~i~~~~~~~~~~-~pvillDEIDk~~~~~~~~-~~~all~~ld~~q~~~f~d~~~~~~~d~ 495 (1230)
.. | ..|.|.....+...+..+... +.||||||||.+......+ ....+..+|.+ + .+.
T Consensus 254 ~~-----~--~~~~g~~e~~l~~~~~~~~~~~~~iL~IDEi~~l~~~~~~~~~~~~~~~~L~~---------~----l~~ 313 (758)
T 1r6b_X 254 LA-----G--TKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKP---------L----LSS 313 (758)
T ss_dssp -C-----C--CCCSSCHHHHHHHHHHHHSSSSCEEEEETTTTTTTTSCCSSSCHHHHHHHHSS---------C----SSS
T ss_pred hc-----c--ccccchHHHHHHHHHHHHHhcCCeEEEEechHHHhhcCCCCcchHHHHHHHHH---------H----HhC
Confidence 21 1 146677777777777766554 4588899999986432211 11111222221 1 123
Q ss_pred CceEEEEecCC-----CCCCCHhhhcccceeecCCCCHHHHHHHHHHhhcchhHHhcCCCCCCcccCHHHHHHHHHH
Q psy8969 496 SRVLFICTANV-----IDTIPEPLRDRMEMIDVSGYVAEEKVAIAAQYLIPQAMKESGLSPEQITLEPSAIQVLIKN 567 (1230)
Q Consensus 496 s~v~~I~TaN~-----~~~I~~~L~~R~~~i~~~~~~~~e~~~i~~~~l~~~~~~~~gl~~~~i~~~~~~~~~li~~ 567 (1230)
.++.+|+++|. ...++++|++||.+|.+..|+.++...|++..+ .+....+ .+.++++++..++..
T Consensus 314 ~~~~~I~at~~~~~~~~~~~d~aL~~Rf~~i~v~~p~~~e~~~il~~l~-~~~~~~~-----~v~~~~~al~~~~~~ 384 (758)
T 1r6b_X 314 GKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLK-PKYEAHH-----DVRYTAKAVRAAVEL 384 (758)
T ss_dssp CCCEEEEEECHHHHHCCCCCTTSSGGGEEEEECCCCCHHHHHHHHHHHH-HHHHHHH-----TCCCCHHHHHHHHHH
T ss_pred CCeEEEEEeCchHHhhhhhcCHHHHhCceEEEcCCCCHHHHHHHHHHHH-HHHHHhc-----CCCCCHHHHHHHHHH
Confidence 57888988885 346889999999999999999999999887643 3333233 456788888877754
No 150
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.36 E-value=1.6e-13 Score=129.49 Aligned_cols=76 Identities=21% Similarity=0.373 Sum_probs=36.4
Q ss_pred ccChhHHHhhhhcccCCCceecCCCccCcccc-ChhhHHHHHhhccC-CCCccccccccccccCCchhHhhhhccccCCC
Q psy8969 803 FTTSNIRKVHIRTHTGEKPYVCGEAGCDKSFA-SATNYKNHMRIHSG-EKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIR 880 (1230)
Q Consensus 803 F~~~~~L~~H~r~H~gekpy~C~~~~Cgk~F~-~~s~L~~H~r~Htg-ekpy~C~~~~C~k~F~~~~~L~~H~~~H~~ek 880 (1230)
+.....+..|+++|+++++|.|.. |++.|. ....|+.|+++|++ ++||.|.+ |++.|.+...|..|+++|++++
T Consensus 6 ~~~~~~~~~h~~~h~~~~~~~C~~--C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~--C~k~F~~~~~L~~H~~~h~~~k 81 (98)
T 2gqj_A 6 SGPGGPEEQWQRAIHERGEAVCPT--CNVVTRKTLVGLKKHMEVCQKLQDALKCQH--CRKQFKSKAGLNYHTMAEHSAK 81 (98)
T ss_dssp CCCCCSCSHHHHTTTTTSCCCCTT--TCCCCSSCSHHHHHHHHHHHHHHHHHSCSS--SCCCCSCHHHHHHHHHHHSCSC
T ss_pred CCCCCcHHHHHHHhccCCCcCCCC--CCCChhhhHHHHHHHHHHHcCCCCCEECCC--CCCccCCHHHHHHHHHHHcCCC
Confidence 333444444555555555555544 555554 44555555554444 44444443 4444444444444444444444
Q ss_pred Cc
Q psy8969 881 PF 882 (1230)
Q Consensus 881 py 882 (1230)
|+
T Consensus 82 p~ 83 (98)
T 2gqj_A 82 PS 83 (98)
T ss_dssp SS
T ss_pred CC
Confidence 43
No 151
>2qby_A CDC6 homolog 1, cell division control protein 6 homolog 1; winged-helix domain, helix-turn-helix, AAA+ ATPase domain, protein-DNA complex; HET: DNA SPD ADP; 3.35A {Sulfolobus solfataricus}
Probab=99.35 E-value=4.1e-12 Score=147.87 Aligned_cols=207 Identities=19% Similarity=0.249 Sum_probs=129.5
Q ss_pred ccccChHHHHHHHHHHHHHhhhcCCCCCceEEEeCCCCCCchHHHHHHHHHh------CCCeEEEecCCcchhHHHhh--
Q psy8969 354 DDHYGMEDVKKRILEFIAVSQLKGTTQGKILCFYGPPGVGKTSIAKSIARAL------NREYFRFSVGGMSDVAEIKG-- 425 (1230)
Q Consensus 354 ~d~~G~~~vK~~i~e~l~~~~~~~~~~~~~llL~GPPG~GKTslak~iA~~l------~~~~~~~~~~~~~d~~~i~g-- 425 (1230)
++++|.++..+.|.+++... .. ...+..++|+||||||||+|++++++.+ +.+++.+++....+...+..
T Consensus 20 ~~~~gr~~e~~~l~~~l~~~-~~-~~~~~~vli~G~~G~GKTtl~~~l~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~i 97 (386)
T 2qby_A 20 DELPHREDQIRKIASILAPL-YR-EEKPNNIFIYGLTGTGKTAVVKFVLSKLHKKFLGKFKHVYINTRQIDTPYRVLADL 97 (386)
T ss_dssp SCCTTCHHHHHHHHHSSGGG-GG-TCCCCCEEEEECTTSSHHHHHHHHHHHHHHHTCSSCEEEEEEHHHHCSHHHHHHHH
T ss_pred CCCCChHHHHHHHHHHHHHH-Hc-CCCCCeEEEECCCCCCHHHHHHHHHHHHHHHhcCCceEEEEECCCCCCHHHHHHHH
Confidence 67899999999998877421 11 2456789999999999999999999998 88888888644333222111
Q ss_pred -----ccccccccCchhHHHHHHh-hcC-C-CCEEEEecccccCCCCCCChhhHHHhhcChhhhhhhhhhccCccccCCc
Q psy8969 426 -----HRRTYVGAMPGKVIQCMKK-TKT-E-NPLVLIDEVDKIGKGYSGDPASALLEMLDPEQNANFLDHYLDVPVDLSR 497 (1230)
Q Consensus 426 -----~~~~~~g~~~g~i~~~~~~-~~~-~-~pvillDEIDk~~~~~~~~~~~all~~ld~~q~~~f~d~~~~~~~d~s~ 497 (1230)
......|.....+...+.. ... . ..||+|||+|.+......+....|+..++. + +..+
T Consensus 98 ~~~l~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vlilDE~~~l~~~~~~~~l~~l~~~~~~---------~-----~~~~ 163 (386)
T 2qby_A 98 LESLDVKVPFTGLSIAELYRRLVKAVRDYGSQVVIVLDEIDAFVKKYNDDILYKLSRINSE---------V-----NKSK 163 (386)
T ss_dssp TTTTSCCCCSSSCCHHHHHHHHHHHHHTCCSCEEEEEETHHHHHHSSCSTHHHHHHHHHHS---------C-----CC--
T ss_pred HHHhCCCCCCCCCCHHHHHHHHHHHHhccCCeEEEEEcChhhhhccCcCHHHHHHhhchhh---------c-----CCCe
Confidence 0000112222232322222 111 2 448889999998543222333333333211 0 2357
Q ss_pred eEEEEecCCC---CCCCHhhhccc--ceeecCCCCHHHHHHHHHHhhcchhHHhcCCCCCCcccCHHHHHHHHHHhhhh-
Q psy8969 498 VLFICTANVI---DTIPEPLRDRM--EMIDVSGYVAEEKVAIAAQYLIPQAMKESGLSPEQITLEPSAIQVLIKNYCRE- 571 (1230)
Q Consensus 498 v~~I~TaN~~---~~I~~~L~~R~--~~i~~~~~~~~e~~~i~~~~l~~~~~~~~gl~~~~i~~~~~~~~~li~~~~~e- 571 (1230)
+.+|+|+|.. ..+++.+++|| ..|.+.+|+.++...++...+- . ++ ....++++++..+.+.....
T Consensus 164 ~~~I~~~~~~~~~~~~~~~~~~r~~~~~i~l~~l~~~~~~~il~~~~~-----~-~~--~~~~~~~~~~~~l~~~~~~~~ 235 (386)
T 2qby_A 164 ISFIGITNDVKFVDLLDPRVKSSLSEEEIIFPPYNAEELEDILTKRAQ-----M-AF--KPGVLPDNVIKLCAALAAREH 235 (386)
T ss_dssp EEEEEEESCGGGGGGCTTHHHHTTTTEEEEECCCCHHHHHHHHHHHHH-----H-HB--CSSCSCHHHHHHHHHHHHHTT
T ss_pred EEEEEEECCCChHhhhCHHHhccCCCeeEEeCCCCHHHHHHHHHHHHH-----h-hc--cCCCCCHHHHHHHHHHHHHhc
Confidence 8899999976 57889999999 6899999999999988877551 1 11 13467888887776543221
Q ss_pred hhHHHHHHHHHHH
Q psy8969 572 SGVRNLQKHIEKV 584 (1230)
Q Consensus 572 ~gvR~l~~~i~~i 584 (1230)
+.+|.+.+.+..+
T Consensus 236 G~~r~~~~ll~~a 248 (386)
T 2qby_A 236 GDARRALDLLRVS 248 (386)
T ss_dssp CCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHH
Confidence 5577666554443
No 152
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=99.34 E-value=3e-13 Score=128.86 Aligned_cols=68 Identities=21% Similarity=0.297 Sum_probs=61.6
Q ss_pred cccCCCCcccCCcccccccccCchhhhhhcc-cc---cCCCCEeecccccCccccchhhHHHH-hhhccCccccccc
Q psy8969 1157 RIHSGIRPYKCPVEYCEKAFSTQYSRKAHIR-TH---TGEKPYRCAHEFCSKSFKTSGDLQKH-VRTHTDEFQMSGL 1228 (1230)
Q Consensus 1157 R~HTGEKPykCpve~CgKsF~~ks~Lk~H~R-tH---TGEKPy~C~~e~CGKsF~~ks~LkrH-~R~HtGE~~~s~~ 1228 (1230)
..-+||+||+|+ .|+++|.+++.|++|++ +| ++++||.| ++|||+|.++++|.+| +++|+||+.|.|-
T Consensus 11 ~~~~gekpy~C~--~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C--~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~ 83 (102)
T 2ghf_A 11 QNKKVEGGYECK--YCTFQTPDLNMFTFHVDSEHPNVVLNSSYVC--VECNFLTKRYDALSEHNLKYHPGEENFKLT 83 (102)
T ss_dssp TCCCCCSSEECS--SCSCEESCHHHHHHHHHHHCSSCCCSCCEEE--TTTTEEESSTHHHHTHHHHTSTTCCCEEEE
T ss_pred ccCCCCcCcCCC--CCCCccCCHHHHHHHHHhhCCCCCCCCCcCC--CCCCcccCCHHHHHHHHHHhcCCCCCeeCC
Confidence 355899999995 69999999999999998 59 67999999 4799999999999999 8999999998874
No 153
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=99.34 E-value=2.9e-13 Score=113.73 Aligned_cols=56 Identities=39% Similarity=0.769 Sum_probs=32.4
Q ss_pred cccCCcccccccccCchhhhhhcccccCCCCEeecccccCccccchhhHHHHhhhccCcc
Q psy8969 1164 PYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTDEF 1223 (1230)
Q Consensus 1164 PykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~~e~CGKsF~~ks~LkrH~R~HtGE~ 1223 (1230)
||+|+ .|++.|.+.+.|.+|+++|++++||.|+ .||+.|.+..+|.+|+++|+++.
T Consensus 1 p~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~k 56 (57)
T 1bbo_A 1 KYICE--ECGIRXKKPSMLKKHIRTHTDVRPYHCT--YCNFSFKTKGNLTKHMKSKAHSK 56 (57)
T ss_dssp CCBCT--TTCCBCSSHHHHHHHHHHTSSCCCEECS--SSSCEESSHHHHHHHHHSSSSCC
T ss_pred CCcCC--CCcCcCCCHHHHHHHHHhcCCCCCccCC--CCCchhcCHHHHHHHHHHhcccC
Confidence 45553 3666666666666666666666666662 46666666666666666665553
No 154
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=99.33 E-value=2e-13 Score=114.69 Aligned_cols=57 Identities=37% Similarity=0.728 Sum_probs=50.5
Q ss_pred CCCCccCCCCCCCCCCchhhhccccccCCCCcccCCcccccccccCchhhhhhcccccC
Q psy8969 1133 SSENNVCPECKKTFSSAHHMKVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTG 1191 (1230)
Q Consensus 1133 ~~kpy~C~~CgK~F~s~s~Lk~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTG 1191 (1230)
++++|.|+.|++.|.+.++|.+|+++|++++||+|+ .|++.|.+++.|.+|+++|++
T Consensus 1 g~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~hh~ 57 (57)
T 3uk3_C 1 GSSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCE--FCEYAAAQKTSLRYHLERHHK 57 (57)
T ss_dssp ----CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECS--SSSCEESSHHHHHHHHHHHC-
T ss_pred CCCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCC--CCcchhCCHHHHHHHHHHhcC
Confidence 357899999999999999999999999999999996 599999999999999999974
No 155
>2gno_A DNA polymerase III, gamma subunit-related protein; structural genomics, joint center for structural genomics, J protein structure initiative; HET: DNA; 2.00A {Thermotoga maritima} SCOP: a.80.1.1 c.37.1.20
Probab=99.33 E-value=3.3e-12 Score=145.55 Aligned_cols=140 Identities=11% Similarity=0.183 Sum_probs=97.7
Q ss_pred ChHHHHHHHHHHHHHhhhcCCCCCceEEEeCCCCCCchHHHHHHHHHh------CCCeEEEecCC-cchhHHHhhccccc
Q psy8969 358 GMEDVKKRILEFIAVSQLKGTTQGKILCFYGPPGVGKTSIAKSIARAL------NREYFRFSVGG-MSDVAEIKGHRRTY 430 (1230)
Q Consensus 358 G~~~vK~~i~e~l~~~~~~~~~~~~~llL~GPPG~GKTslak~iA~~l------~~~~~~~~~~~-~~d~~~i~g~~~~~ 430 (1230)
|++++.+.|..++.. + +++.+||+||||+|||++|+++|+.+ ...|+.++..+ -....
T Consensus 1 g~~~~~~~L~~~i~~----~--~~~~~Lf~Gp~G~GKtt~a~~la~~~~~~~~~~~d~~~l~~~~~~~~id--------- 65 (305)
T 2gno_A 1 GAKDQLETLKRIIEK----S--EGISILINGEDLSYPREVSLELPEYVEKFPPKASDVLEIDPEGENIGID--------- 65 (305)
T ss_dssp ---CHHHHHHHHHHT----C--SSEEEEEECSSSSHHHHHHHHHHHHHHTSCCCTTTEEEECCSSSCBCHH---------
T ss_pred ChHHHHHHHHHHHHC----C--CCcEEEEECCCCCCHHHHHHHHHHhCchhhccCCCEEEEcCCcCCCCHH---------
Confidence 678888888887742 2 26789999999999999999999974 34566665432 11111
Q ss_pred cccCchhHHHHHHhhcC-----CCCEEEEecccccCCCCCCChhhHHHhhcChhhhhhhhhhccCccccCCceEEEEecC
Q psy8969 431 VGAMPGKVIQCMKKTKT-----ENPLVLIDEVDKIGKGYSGDPASALLEMLDPEQNANFLDHYLDVPVDLSRVLFICTAN 505 (1230)
Q Consensus 431 ~g~~~g~i~~~~~~~~~-----~~pvillDEIDk~~~~~~~~~~~all~~ld~~q~~~f~d~~~~~~~d~s~v~~I~TaN 505 (1230)
.|++.+..+.. ...||||||+|.+.. +..++||..|+. ...+++||++||
T Consensus 66 ------~ir~li~~~~~~p~~~~~kvviIdead~lt~----~a~naLLk~LEe---------------p~~~t~fIl~t~ 120 (305)
T 2gno_A 66 ------DIRTIKDFLNYSPELYTRKYVIVHDCERMTQ----QAANAFLKALEE---------------PPEYAVIVLNTR 120 (305)
T ss_dssp ------HHHHHHHHHTSCCSSSSSEEEEETTGGGBCH----HHHHHTHHHHHS---------------CCTTEEEEEEES
T ss_pred ------HHHHHHHHHhhccccCCceEEEeccHHHhCH----HHHHHHHHHHhC---------------CCCCeEEEEEEC
Confidence 12222222221 245999999999853 345677776642 125788888889
Q ss_pred CCCCCCHhhhcccceeecCCCCHHHHHHHHHHhh
Q psy8969 506 VIDTIPEPLRDRMEMIDVSGYVAEEKVAIAAQYL 539 (1230)
Q Consensus 506 ~~~~I~~~L~~R~~~i~~~~~~~~e~~~i~~~~l 539 (1230)
.++.|.+++++| ++.+.+++.++...++.+.+
T Consensus 121 ~~~kl~~tI~SR--~~~f~~l~~~~i~~~L~~~~ 152 (305)
T 2gno_A 121 RWHYLLPTIKSR--VFRVVVNVPKEFRDLVKEKI 152 (305)
T ss_dssp CGGGSCHHHHTT--SEEEECCCCHHHHHHHHHHH
T ss_pred ChHhChHHHHce--eEeCCCCCHHHHHHHHHHHh
Confidence 899999999999 99999999999988877654
No 156
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.32 E-value=5e-13 Score=120.05 Aligned_cols=63 Identities=24% Similarity=0.447 Sum_probs=47.4
Q ss_pred ccCCCCcccCCcccccccccCchhhhhhcccccC---CCCEeecccccCccccchhhHHHHhh-hccCccc
Q psy8969 1158 IHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTG---EKPYRCAHEFCSKSFKTSGDLQKHVR-THTDEFQ 1224 (1230)
Q Consensus 1158 ~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTG---EKPy~C~~e~CGKsF~~ks~LkrH~R-~HtGE~~ 1224 (1230)
+|+|++||+|+ .|++.|.+++.|.+|+++|++ ++||.|. +|++.|.++.+|.+|++ .|.++..
T Consensus 1 ~h~~~k~~~C~--~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~--~C~k~f~~~~~L~~H~~~~H~~~~~ 67 (78)
T 2d9h_A 1 GSSGSSGLQCE--ICGFTCRQKASLNWHQRKHAETVAALRFPCE--FCGKRFEKPDSVAAHRSKSHPALLL 67 (78)
T ss_dssp CCCSCCCEECS--SSCCEESSHHHHHHHHHHHHHHTTTCCEECT--TTCCEESSHHHHHHHHHHTSTTTSS
T ss_pred CCCCCcCeECC--CCCCeeCCHHHHHHHHHHhhccCCCcccCCC--CCCchhCCHHHHHHHHHHhCCCCCC
Confidence 47788888884 488888888888888888875 7888884 68888888888888874 4555543
No 157
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=99.29 E-value=1.2e-12 Score=110.01 Aligned_cols=56 Identities=30% Similarity=0.739 Sum_probs=53.9
Q ss_pred CccCCCCCCCCCCchhhhccccccCCCCcccCCcccccccccCchhhhhhcccccCCC
Q psy8969 1136 NNVCPECKKTFSSAHHMKVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEK 1193 (1230)
Q Consensus 1136 py~C~~CgK~F~s~s~Lk~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEK 1193 (1230)
||.|+.||+.|.+.+.|..|+++|++++||.|+ .|+++|.+.+.|.+|+++|++++
T Consensus 1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~k 56 (57)
T 1bbo_A 1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCT--YCNFSFKTKGNLTKHMKSKAHSK 56 (57)
T ss_dssp CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECS--SSSCEESSHHHHHHHHHSSSSCC
T ss_pred CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCC--CCCchhcCHHHHHHHHHHhcccC
Confidence 689999999999999999999999999999995 59999999999999999999986
No 158
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=99.29 E-value=9.3e-13 Score=111.93 Aligned_cols=57 Identities=37% Similarity=0.825 Sum_probs=37.9
Q ss_pred CcccCCcccccccccCchhhhhhcccccCCCCEeecccccCccccchhhHHHHh-hhccCcc
Q psy8969 1163 RPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHV-RTHTDEF 1223 (1230)
Q Consensus 1163 KPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~~e~CGKsF~~ks~LkrH~-R~HtGE~ 1223 (1230)
|||+|+ .|++.|.+.+.|.+|+++|++++||.|+ .|++.|.++..|.+|+ ++|+|+.
T Consensus 1 k~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~H~~~~ 58 (60)
T 2adr_A 1 RSFVCE--VCTRAFARQEHLKRHYRSHTNEKPYPCG--LCNRAFTRRDLLIRHAQKIHSGNL 58 (60)
T ss_dssp CCBCCT--TTCCCBSCHHHHHHHHHTTTSSCSEECT--TTCCEESSHHHHHHHHTTTSCCSS
T ss_pred CcCcCC--CCccccCCHHHHHHHHHHhCCCCCccCC--CCCCccCCHHHHHHHHHHHcCCcC
Confidence 466673 4777777777777777777777777773 5777777777777775 5666653
No 159
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=99.28 E-value=1.9e-12 Score=122.00 Aligned_cols=78 Identities=13% Similarity=0.276 Sum_probs=55.3
Q ss_pred CCccChhHHHhhhhcccCCCceecCCCccCccc-cChhhHHHHHhhccCCCCccccccccccccCCchhHhhh-hccccC
Q psy8969 801 RSFTTSNIRKVHIRTHTGEKPYVCGEAGCDKSF-ASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKH-TLVHSD 878 (1230)
Q Consensus 801 k~F~~~~~L~~H~r~H~gekpy~C~~~~Cgk~F-~~~s~L~~H~r~Htgekpy~C~~~~C~k~F~~~~~L~~H-~~~H~~ 878 (1230)
..|.....|..|++.|+++++|.|+. |++.| .+.+.|+.|+++| +++||.|.. |++.|.+...|..| +++|++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~C~~--C~k~F~~~~~~L~~H~~~h-~~k~~~C~~--Cgk~F~~~~~L~~H~~~~H~~ 88 (96)
T 2ctd_A 14 PVYAAGSLEEQWYLEIVDKGSVSCPT--CQAVGRKTIEGLKKHMENC-KQEMFTCHH--CGKQLRSLAGMKYHVMANHNS 88 (96)
T ss_dssp CSSCTTCHHHHHHHHHHHTSCEECTT--TCSCEESSHHHHHHHHHHH-CCCCCCCSS--SCCCCSSHHHHHHHHHHHTCC
T ss_pred CCCCCchHHHHHHHHhcCCCCcCCCC--CCCCcccCHHHHHHHHHHH-CCCCeECCC--CCCeeCCHHHHHHHhHHhcCC
Confidence 35566677777777777777777777 77777 7777777777777 777777764 77777777777777 677765
Q ss_pred CCCcc
Q psy8969 879 IRPFI 883 (1230)
Q Consensus 879 ekpy~ 883 (1230)
+..|.
T Consensus 89 ~p~~~ 93 (96)
T 2ctd_A 89 LPSGP 93 (96)
T ss_dssp CSSCS
T ss_pred CCCCC
Confidence 44333
No 160
>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.28 E-value=9.3e-13 Score=122.64 Aligned_cols=63 Identities=33% Similarity=0.565 Sum_probs=57.8
Q ss_pred CCCccCCCCCCCCCCchhhhccccc-cCCCCc--------ccCCcccccccccCchhhhhhcccccCCCCEeec
Q psy8969 1134 SENNVCPECKKTFSSAHHMKVHLRI-HSGIRP--------YKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCA 1198 (1230)
Q Consensus 1134 ~kpy~C~~CgK~F~s~s~Lk~H~R~-HTGEKP--------ykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~ 1198 (1230)
...|.|+.|++.|.+.++|.+|+++ |++++| |.|+ .|+++|.+++.|++|+++|+|++||.|.
T Consensus 23 ~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~ 94 (95)
T 2ej4_A 23 QLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECP--REGKSFKAKYKLVNHIRVHTGEKSGPSS 94 (95)
T ss_dssp CSSSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCS--STTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred cCCCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCC--CCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence 3458899999999999999999997 999998 9995 5999999999999999999999999994
No 161
>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.27 E-value=2.7e-13 Score=119.45 Aligned_cols=72 Identities=18% Similarity=0.283 Sum_probs=67.2
Q ss_pred ChhHHHhhhhcccCCCceecCCCccCccccChhhHHHHHhhccCCCCccccccccccccCCchhHhhhhccccCCCCccC
Q psy8969 805 TSNIRKVHIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFIC 884 (1230)
Q Consensus 805 ~~~~L~~H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~~~~C~k~F~~~~~L~~H~~~H~~ekpy~C 884 (1230)
+...|..|+++|++++||.|.. ||+.|.+.+.|.. ++||.|.. |++.|.+...|..|+++|++++||.|
T Consensus 2 ~~~~l~~H~~~h~~~~~~~C~~--C~k~f~~~~~l~~-------~~~~~C~~--C~~~f~~~~~l~~H~~~H~~~~~~~C 70 (73)
T 2ctu_A 2 SSGSSGKRQKIHLGDRSQKCSK--CGIIFIRRSTLSR-------RKTPMCEK--CRKDSCQEAALNKDEGNESGKKTSGP 70 (73)
T ss_dssp CCCSCCCCCCCCCCCSEEECSS--SCCEEECCCCCCC-------SSSCCCHH--HHHTCSCCCSSCCCSSCCCCCCCSSC
T ss_pred cchhHHHHHHHhCCCCCeeCCc--ccchhCCHHHhCc-------CCCCCCCC--CChhhcCHHHHHHHHHhhcCCCCCCC
Confidence 3467889999999999999999 9999999999876 88999975 99999999999999999999999999
Q ss_pred CCC
Q psy8969 885 DRC 887 (1230)
Q Consensus 885 ~~C 887 (1230)
+.|
T Consensus 71 ~~C 73 (73)
T 2ctu_A 71 SSG 73 (73)
T ss_dssp CCC
T ss_pred CCC
Confidence 998
No 162
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=99.27 E-value=2.1e-12 Score=109.71 Aligned_cols=57 Identities=32% Similarity=0.719 Sum_probs=53.4
Q ss_pred CCccCCCCCCCCCCchhhhccccccCCCCcccCCcccccccccCchhhhhhc-ccccCCC
Q psy8969 1135 ENNVCPECKKTFSSAHHMKVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHI-RTHTGEK 1193 (1230)
Q Consensus 1135 kpy~C~~CgK~F~s~s~Lk~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~-RtHTGEK 1193 (1230)
+||.|+.|++.|.+.++|.+|+++|++++||+|+ .|++.|.+++.|.+|+ ++|+++.
T Consensus 1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~H~~~~ 58 (60)
T 2adr_A 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCG--LCNRAFTRRDLLIRHAQKIHSGNL 58 (60)
T ss_dssp CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECT--TTCCEESSHHHHHHHHTTTSCCSS
T ss_pred CcCcCCCCccccCCHHHHHHHHHHhCCCCCccCC--CCCCccCCHHHHHHHHHHHcCCcC
Confidence 5899999999999999999999999999999996 5999999999999996 7999864
No 163
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.25 E-value=1e-12 Score=118.07 Aligned_cols=65 Identities=25% Similarity=0.363 Sum_probs=60.3
Q ss_pred cCCCCCccCCCCCCCCCCchhhhccccccCC---CCcccCCcccccccccCchhhhhhc-ccccCCCCEee
Q psy8969 1131 STSSENNVCPECKKTFSSAHHMKVHLRIHSG---IRPYKCPVEYCEKAFSTQYSRKAHI-RTHTGEKPYRC 1197 (1230)
Q Consensus 1131 ~t~~kpy~C~~CgK~F~s~s~Lk~H~R~HTG---EKPykCpve~CgKsF~~ks~Lk~H~-RtHTGEKPy~C 1197 (1230)
|+++++|.|+.|++.|.+.+.|.+|+++|++ ++||+|+ .|++.|.++..|.+|+ +.|++++|...
T Consensus 2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~--~C~k~f~~~~~L~~H~~~~H~~~~~~~~ 70 (78)
T 2d9h_A 2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCE--FCGKRFEKPDSVAAHRSKSHPALLLAPQ 70 (78)
T ss_dssp CCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECT--TTCCEESSHHHHHHHHHHTSTTTSSCCS
T ss_pred CCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCC--CCCchhCCHHHHHHHHHHhCCCCCCCcc
Confidence 5788999999999999999999999999996 8999995 5999999999999999 68999998765
No 164
>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}
Probab=99.24 E-value=3.3e-12 Score=112.86 Aligned_cols=64 Identities=41% Similarity=0.658 Sum_probs=37.2
Q ss_pred ccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeecccccCccccchhhHHHHhhhc
Q psy8969 1156 LRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTH 1219 (1230)
Q Consensus 1156 ~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~~e~CGKsF~~ks~LkrH~R~H 1219 (1230)
...++.+++|.|++..|++.|.+.+.|++|+++|++++||+|..+.|++.|.++.+|.+|+++|
T Consensus 9 ~~~~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H 72 (72)
T 2epa_A 9 QIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH 72 (72)
T ss_dssp CCCCCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred CCCccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence 3345555666663222666666666666666666666666663113666666666666666655
No 165
>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.23 E-value=1.3e-12 Score=114.98 Aligned_cols=62 Identities=15% Similarity=0.241 Sum_probs=37.4
Q ss_pred cccccCCCCCccCCCCCCCCCCchhhhccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEee
Q psy8969 1127 TVKKSTSSENNVCPECKKTFSSAHHMKVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 1197 (1230)
Q Consensus 1127 ~~~~~t~~kpy~C~~CgK~F~s~s~Lk~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C 1197 (1230)
+...|.++++|.|+.||+.|.+.++|.. ++||.|+ .|++.|.+++.|.+|+++|+|++||.|
T Consensus 9 H~~~h~~~~~~~C~~C~k~f~~~~~l~~-------~~~~~C~--~C~~~f~~~~~l~~H~~~H~~~~~~~C 70 (73)
T 2ctu_A 9 RQKIHLGDRSQKCSKCGIIFIRRSTLSR-------RKTPMCE--KCRKDSCQEAALNKDEGNESGKKTSGP 70 (73)
T ss_dssp CCCCCCCCSEEECSSSCCEEECCCCCCC-------SSSCCCH--HHHHTCSCCCSSCCCSSCCCCCCCSSC
T ss_pred HHHHhCCCCCeeCCcccchhCCHHHhCc-------CCCCCCC--CCChhhcCHHHHHHHHHhhcCCCCCCC
Confidence 3344555566666666666666666555 5566663 466666666666666666666666666
No 166
>3n70_A Transport activator; sigma-54, ntpase, PSI, MCSG, structural genomics, center for structural genomics; 2.80A {Escherichia coli}
Probab=99.23 E-value=1.5e-11 Score=124.53 Aligned_cols=130 Identities=11% Similarity=0.176 Sum_probs=87.0
Q ss_pred cccChHHHHHHHHHHHHHhhhcCCCCCceEEEeCCCCCCchHHHHHHHHHh---CCCeEEEecCCcchhHHHhhcccccc
Q psy8969 355 DHYGMEDVKKRILEFIAVSQLKGTTQGKILCFYGPPGVGKTSIAKSIARAL---NREYFRFSVGGMSDVAEIKGHRRTYV 431 (1230)
Q Consensus 355 d~~G~~~vK~~i~e~l~~~~~~~~~~~~~llL~GPPG~GKTslak~iA~~l---~~~~~~~~~~~~~d~~~i~g~~~~~~ 431 (1230)
+++|.....+++.+.+.... ..+..++|+||||||||++|++|+... +.+|+ ++++.+.+.
T Consensus 2 ~iiG~s~~~~~~~~~~~~~a----~~~~~vll~G~~GtGKt~lA~~i~~~~~~~~~~~v-~~~~~~~~~----------- 65 (145)
T 3n70_A 2 ELIGRSEWINQYRRRLQQLS----ETDIAVWLYGAPGTGRMTGARYLHQFGRNAQGEFV-YRELTPDNA----------- 65 (145)
T ss_dssp --CCSSHHHHHHHHHHHHHT----TCCSCEEEESSTTSSHHHHHHHHHHSSTTTTSCCE-EEECCTTTS-----------
T ss_pred CceeCCHHHHHHHHHHHHHh----CCCCCEEEECCCCCCHHHHHHHHHHhCCccCCCEE-EECCCCCcc-----------
Confidence 56788888888887764322 233568899999999999999999987 77999 998776553
Q ss_pred ccCchhHHHHHHhhcCCCCEEEEecccccCCCCCCChhhHHHhhcChhhhhhhhhhccCccccCCceEEEEecCCC----
Q psy8969 432 GAMPGKVIQCMKKTKTENPLVLIDEVDKIGKGYSGDPASALLEMLDPEQNANFLDHYLDVPVDLSRVLFICTANVI---- 507 (1230)
Q Consensus 432 g~~~g~i~~~~~~~~~~~pvillDEIDk~~~~~~~~~~~all~~ld~~q~~~f~d~~~~~~~d~s~v~~I~TaN~~---- 507 (1230)
.. ....+..+ .+.+|||||||.+.. +....|+.+|. . ...++.+|+|||..
T Consensus 66 ~~----~~~~~~~a--~~g~l~ldei~~l~~----~~q~~Ll~~l~------------~---~~~~~~~I~~t~~~~~~~ 120 (145)
T 3n70_A 66 PQ----LNDFIALA--QGGTLVLSHPEHLTR----EQQYHLVQLQS------------Q---EHRPFRLIGIGDTSLVEL 120 (145)
T ss_dssp SC----HHHHHHHH--TTSCEEEECGGGSCH----HHHHHHHHHHH------------S---SSCSSCEEEEESSCHHHH
T ss_pred hh----hhcHHHHc--CCcEEEEcChHHCCH----HHHHHHHHHHh------------h---cCCCEEEEEECCcCHHHH
Confidence 11 11222222 356899999999843 33456666651 1 12356788888863
Q ss_pred ---CCCCHhhhcccce--eecCC
Q psy8969 508 ---DTIPEPLRDRMEM--IDVSG 525 (1230)
Q Consensus 508 ---~~I~~~L~~R~~~--i~~~~ 525 (1230)
..+.+.|..|+.. |.+++
T Consensus 121 ~~~~~~~~~L~~rl~~~~i~lPp 143 (145)
T 3n70_A 121 AASNHIIAELYYCFAMTQIACLP 143 (145)
T ss_dssp HHHSCCCHHHHHHHHHHEEECCC
T ss_pred HHcCCCCHHHHHHhcCCEEeCCC
Confidence 3577888888864 44444
No 167
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=99.23 E-value=1.2e-12 Score=113.50 Aligned_cols=60 Identities=20% Similarity=0.540 Sum_probs=56.0
Q ss_pred ccCCCCCccCCCCCCCCCCchhhhccccc-c-CCCCcccCCcccccccccCchhhhhhcccccC
Q psy8969 1130 KSTSSENNVCPECKKTFSSAHHMKVHLRI-H-SGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTG 1191 (1230)
Q Consensus 1130 ~~t~~kpy~C~~CgK~F~s~s~Lk~H~R~-H-TGEKPykCpve~CgKsF~~ks~Lk~H~RtHTG 1191 (1230)
.|+++++|.|+.||+.|.+.++|.+|+++ | ++++||+|+ .|+++|.+++.|.+|+++|+|
T Consensus 4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~--~C~k~f~~~~~L~~H~~~~H~ 65 (66)
T 2drp_A 4 TKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCP--FCFKEFTRKDNMTAHVKIIHK 65 (66)
T ss_dssp EEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECT--TTCCEESCHHHHHHHHHHHTC
T ss_pred ccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECC--CCCCccCCHHHHHHHHHHHcC
Confidence 46788999999999999999999999998 8 699999995 599999999999999999986
No 168
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=99.22 E-value=4.2e-12 Score=113.80 Aligned_cols=68 Identities=22% Similarity=0.531 Sum_probs=60.2
Q ss_pred CCcccccCCCCCccCCCCCCCCCCchhhhcccc-ccCCC-CcccCCcccccccccCchhhhhhccc-ccCCCC
Q psy8969 1125 GGTVKKSTSSENNVCPECKKTFSSAHHMKVHLR-IHSGI-RPYKCPVEYCEKAFSTQYSRKAHIRT-HTGEKP 1194 (1230)
Q Consensus 1125 ~~~~~~~t~~kpy~C~~CgK~F~s~s~Lk~H~R-~HTGE-KPykCpve~CgKsF~~ks~Lk~H~Rt-HTGEKP 1194 (1230)
..+.+.|+++++|.|+.|++.|.+.++|.+|++ .|+++ +||+|+ .|++.|.++..|.+|+++ |.++.|
T Consensus 4 ~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~--~C~~~f~~~~~L~~H~~~~H~~~~p 74 (77)
T 2ct1_A 4 GSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCP--HCDTVIARKSDLGVHLRKQHSYSGP 74 (77)
T ss_dssp CCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECS--SSSCEESSHHHHHHHHHHTSCCSCC
T ss_pred CccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCC--CCCCccCCHHHHHHHHHHhCCCCCC
Confidence 346678899999999999999999999999997 78885 999995 599999999999999996 555666
No 169
>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.21 E-value=4.1e-12 Score=110.54 Aligned_cols=60 Identities=25% Similarity=0.444 Sum_probs=44.5
Q ss_pred cCCCCcccCCcccccccccCchhhhhhcccccCCCCEeeccc-ccCccccchhhHHHHhhhccCccc
Q psy8969 1159 HSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHE-FCSKSFKTSGDLQKHVRTHTDEFQ 1224 (1230)
Q Consensus 1159 HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~~e-~CGKsF~~ks~LkrH~R~HtGE~~ 1224 (1230)
+.++|||+|+ +|+++|. ++.|+.|+++ ++++||.| + .||++|.++++|.+|+++|.+...
T Consensus 5 ~C~~~~~~C~--~C~k~f~-~~~L~~H~~~-~~~~p~~C--~~~C~k~f~~~~~L~~H~~~hc~~~~ 65 (66)
T 2eod_A 5 SSGKRTQPCT--YCTKEFV-FDTIQSHQYQ-CPRLPVAC--PNQCGVGTVAREDLPGHLKDSCNTAL 65 (66)
T ss_dssp CCCCCEEECS--SSCCEEE-HHHHHHHHHH-CSSSEEEC--TTCCSCCEEETTTHHHHHHTTSSSCC
T ss_pred cCCCCCeecc--ccCCccC-HHHHHHHHHH-cCCcCccC--CcccCcccccHHHHHHHHHhhcccCc
Confidence 4567777774 5777777 7777777777 77777777 4 578888777778888777776554
No 170
>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}
Probab=99.21 E-value=5.4e-12 Score=111.43 Aligned_cols=60 Identities=33% Similarity=0.726 Sum_probs=55.0
Q ss_pred ccCCCCCccCCC--CCCCCCCchhhhccccccCCCCcccCCcccccccccCchhhhhhcccc
Q psy8969 1130 KSTSSENNVCPE--CKKTFSSAHHMKVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTH 1189 (1230)
Q Consensus 1130 ~~t~~kpy~C~~--CgK~F~s~s~Lk~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtH 1189 (1230)
.+...++|.|.. |++.|.+.+.|.+|+++|++++||+|++..|++.|.++..|.+|+++|
T Consensus 11 ~~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H 72 (72)
T 2epa_A 11 DSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH 72 (72)
T ss_dssp CCCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred CccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence 456678999998 999999999999999999999999995335999999999999999988
No 171
>3m65_A ATP-dependent protease LA 1; coiled-coil, ATP-binding, hydrolase, nucleotide-binding, Pro serine protease, stress response; 2.60A {Bacillus subtilis}
Probab=99.21 E-value=3.1e-11 Score=130.04 Aligned_cols=104 Identities=17% Similarity=0.326 Sum_probs=94.0
Q ss_pred ccCCcccceeeeccC---CcHHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHhccCCCCCCChhHHHHHHHhcCCCChHH
Q psy8969 134 NDDNFNDHKVSLVKD---LSEVYSALMQEVIKTVRDIISMNPLYKEQLMILLQQENSPVVDNPIYLADLGAALTGAEGTE 210 (1230)
Q Consensus 134 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 210 (1230)
.-+.|+.+.|+.+++ .+.+.+|+++.+++.|++|+++++.+++++...+.+ ++||++|||++|++++++.++
T Consensus 103 ~~~~~~~a~v~~~~~~~~~~~e~~al~~~l~~~~~~~~~~~~~~~~e~~~~~~~-----~~dp~~lad~ia~~l~l~~~e 177 (209)
T 3m65_A 103 EHEDYTSVDIQLIHEDDSKDTEDEALMRTLLDHFDQYIKISKKISAETYAAVTD-----IEEPGRMADIVASHLPLKLKD 177 (209)
T ss_dssp ECSSSEEEEEEECCCC--CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-----CCCHHHHHHHHHHHSCCCHHH
T ss_pred cCCCcEEEEEEEecCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHc-----cCCHHHHHHHHHHhCCCCHHH
Confidence 346788888888865 356789999999999999999999999888777754 899999999999999999999
Q ss_pred HHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHH
Q psy8969 211 QQAILEEMDIPKRLMLSLSLLKKELELNKLQQ 242 (1230)
Q Consensus 211 ~~~~l~~~~~~~r~~~~~~~~~~~~~~~~~~~ 242 (1230)
||+|||+.|+.+||++++.+|.+|+++++|++
T Consensus 178 kQ~lLe~~d~~~Rl~~l~~~L~~E~e~~~l~~ 209 (209)
T 3m65_A 178 KQDILETADVKDRLNKVIDFINNEKEVLEIEK 209 (209)
T ss_dssp HHHHHTCCSHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHhhcC
Confidence 99999999999999999999999999998863
No 172
>3co5_A Putative two-component system transcriptional RES regulator; structural genomics, APC89341.1; 2.40A {Neisseria gonorrhoeae}
Probab=99.18 E-value=5.4e-12 Score=127.51 Aligned_cols=132 Identities=9% Similarity=0.139 Sum_probs=86.8
Q ss_pred cccccChHHHHHHHHHHHHHhhhcCCCCCceEEEeCCCCCCchHHHHHHHHHhCCCeEEEecCCcchhHHHhhccccccc
Q psy8969 353 DDDHYGMEDVKKRILEFIAVSQLKGTTQGKILCFYGPPGVGKTSIAKSIARALNREYFRFSVGGMSDVAEIKGHRRTYVG 432 (1230)
Q Consensus 353 ~~d~~G~~~vK~~i~e~l~~~~~~~~~~~~~llL~GPPG~GKTslak~iA~~l~~~~~~~~~~~~~d~~~i~g~~~~~~g 432 (1230)
+-+++|...+.+++.+.+.... ..+..++|+||||||||++|++|+...+ +|+.++++.+.+. +
T Consensus 3 ~~~~iG~s~~~~~l~~~~~~~~----~~~~~vll~G~~GtGKt~lA~~i~~~~~-~~~~~~~~~~~~~---------~-- 66 (143)
T 3co5_A 3 AFDKLGNSAAIQEMNREVEAAA----KRTSPVFLTGEAGSPFETVARYFHKNGT-PWVSPARVEYLID---------M-- 66 (143)
T ss_dssp -----CCCHHHHHHHHHHHHHH----TCSSCEEEEEETTCCHHHHHGGGCCTTS-CEECCSSTTHHHH---------C--
T ss_pred CcCceeCCHHHHHHHHHHHHHh----CCCCcEEEECCCCccHHHHHHHHHHhCC-CeEEechhhCChH---------h--
Confidence 3467898888888888875432 2235688999999999999999999988 8988887654431 1
Q ss_pred cCchhHHHHHHhhcCCCCEEEEecccccCCCCCCChhhHHHhhcChhhhhhhhhhccCccccCCceEEEEecCCC-CC--
Q psy8969 433 AMPGKVIQCMKKTKTENPLVLIDEVDKIGKGYSGDPASALLEMLDPEQNANFLDHYLDVPVDLSRVLFICTANVI-DT-- 509 (1230)
Q Consensus 433 ~~~g~i~~~~~~~~~~~pvillDEIDk~~~~~~~~~~~all~~ld~~q~~~f~d~~~~~~~d~s~v~~I~TaN~~-~~-- 509 (1230)
....+..+ .+.+|||||||.+.. +....|+++|+... ..++.+|+|||.. +.
T Consensus 67 -----~~~~~~~a--~~~~l~lDei~~l~~----~~q~~Ll~~l~~~~--------------~~~~~iI~~tn~~~~~~~ 121 (143)
T 3co5_A 67 -----PMELLQKA--EGGVLYVGDIAQYSR----NIQTGITFIIGKAE--------------RCRVRVIASCSYAAGSDG 121 (143)
T ss_dssp -----HHHHHHHT--TTSEEEEEECTTCCH----HHHHHHHHHHHHHT--------------TTTCEEEEEEEECTTTC-
T ss_pred -----hhhHHHhC--CCCeEEEeChHHCCH----HHHHHHHHHHHhCC--------------CCCEEEEEecCCCHHHHH
Confidence 11122222 356999999998843 34566777665421 2457788888854 33
Q ss_pred --CCHhhhcccce--eecCC
Q psy8969 510 --IPEPLRDRMEM--IDVSG 525 (1230)
Q Consensus 510 --I~~~L~~R~~~--i~~~~ 525 (1230)
+.+.|.+|+.. |.+++
T Consensus 122 ~~~~~~L~~rl~~~~i~lPp 141 (143)
T 3co5_A 122 ISCEEKLAGLFSESVVRIPP 141 (143)
T ss_dssp -CHHHHHHHHSSSEEEEECC
T ss_pred hCccHHHHHHhcCcEEeCCC
Confidence 45677888765 44444
No 173
>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.17 E-value=4.5e-12 Score=110.33 Aligned_cols=61 Identities=18% Similarity=0.360 Sum_probs=55.9
Q ss_pred cCCCCCccCCCCCCCCCCchhhhccccccCCCCcccCCcccccccccCchhhhhhcccccCCCC
Q psy8969 1131 STSSENNVCPECKKTFSSAHHMKVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKP 1194 (1230)
Q Consensus 1131 ~t~~kpy~C~~CgK~F~s~s~Lk~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKP 1194 (1230)
..+.+||.|+.||+.|. .++|..|+++ +|++||+|+ ..|+++|..++.|.+|+++|...+|
T Consensus 5 ~C~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~-~~C~k~f~~~~~L~~H~~~hc~~~~ 65 (66)
T 2eod_A 5 SSGKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACP-NQCGVGTVAREDLPGHLKDSCNTAL 65 (66)
T ss_dssp CCCCCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECT-TCCSCCEEETTTHHHHHHTTSSSCC
T ss_pred cCCCCCeeccccCCccC-HHHHHHHHHH-cCCcCccCC-cccCcccccHHHHHHHHHhhcccCc
Confidence 35678999999999999 9999999999 999999995 0599999999999999999998876
No 174
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1
Probab=99.16 E-value=6.9e-12 Score=110.96 Aligned_cols=60 Identities=35% Similarity=0.759 Sum_probs=55.8
Q ss_pred cccCCCCCccCC--CCCCCCCCchhhhccccccCCCCcccCCcccccccccCchhhhhhccccc
Q psy8969 1129 KKSTSSENNVCP--ECKKTFSSAHHMKVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHT 1190 (1230)
Q Consensus 1129 ~~~t~~kpy~C~--~CgK~F~s~s~Lk~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHT 1190 (1230)
..++++++|.|+ .|++.|.+.+.|.+|+++|++++||+|+ .|+++|.+++.|.+|+++||
T Consensus 12 ~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~Ht 73 (73)
T 1f2i_G 12 YVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCR--ICMRNFSRSDHLTTHIRTHT 73 (73)
T ss_dssp CCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECT--TTCCEESCHHHHHHHHTTCC
T ss_pred ccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECC--CCCchhCCHHHHHHHHHhcC
Confidence 356788999997 6999999999999999999999999995 59999999999999999996
No 175
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.15 E-value=1.1e-11 Score=99.57 Aligned_cols=45 Identities=33% Similarity=0.489 Sum_probs=41.3
Q ss_pred ccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeeccccc
Q psy8969 1154 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFC 1202 (1230)
Q Consensus 1154 ~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~~e~C 1202 (1230)
+|+++|++++||+|+ .|+++|.+++.|++|+++|++++||.|+ +|
T Consensus 2 ~H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~~~C~--~C 46 (46)
T 2ytn_A 2 SSGSSGTGKKPYKCN--ECGKVFTQNSHLARHRGIHTGEKPSGPS--SG 46 (46)
T ss_dssp CCCCCCSCCSSCBCT--TTCCBCSSHHHHHHHGGGTSCCCCCSCC--CC
T ss_pred CCCcCCCCCcCeECC--CCCCeeCCHHHHHHHhhhcCCCCCCCCC--CC
Confidence 699999999999995 5999999999999999999999999994 56
No 176
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}
Probab=99.15 E-value=1e-11 Score=99.63 Aligned_cols=45 Identities=29% Similarity=0.409 Sum_probs=41.2
Q ss_pred ccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeeccccc
Q psy8969 1154 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFC 1202 (1230)
Q Consensus 1154 ~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~~e~C 1202 (1230)
+|+++|++++||+|+ .|+++|.+++.|++|+++|++++||+|+ +|
T Consensus 2 ~H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~~~~~C~--~C 46 (46)
T 2em0_A 2 SSGSSGMGEKTWKCR--ECDMCFSQASSLRLHQNVHVGEKPSGPS--SG 46 (46)
T ss_dssp CCCCCSCCCCCCCCS--SSCCCCSSHHHHHHHGGGGSSSSCSCSS--CC
T ss_pred CCcCccCCCcCeECC--CCCcccCCHHHHHHHHHHcCCCCCcCCC--CC
Confidence 699999999999995 5999999999999999999999999994 56
No 177
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Probab=99.15 E-value=9.9e-12 Score=99.67 Aligned_cols=45 Identities=33% Similarity=0.540 Sum_probs=41.5
Q ss_pred ccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeeccccc
Q psy8969 1154 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFC 1202 (1230)
Q Consensus 1154 ~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~~e~C 1202 (1230)
+|+++|++++||+|+ .|+++|.+++.|.+|+++|+|++||+|+ +|
T Consensus 2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~--~C 46 (46)
T 2el4_A 2 SSGSSGTGVKPYGCS--QCAKTFSLKSQLIVHQRSHTGVKPSGPS--SG 46 (46)
T ss_dssp CCCCCSCCCCSEECS--SSSCEESSHHHHHHHGGGSSSCCCSCCT--TC
T ss_pred ccccCCCCCCceECC--CCCchhCCHHHHHHHHHHhCCCCCCCCC--CC
Confidence 699999999999995 5999999999999999999999999994 56
No 178
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.14 E-value=1.1e-11 Score=99.51 Aligned_cols=45 Identities=36% Similarity=0.566 Sum_probs=41.4
Q ss_pred ccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeeccccc
Q psy8969 1154 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFC 1202 (1230)
Q Consensus 1154 ~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~~e~C 1202 (1230)
+|+++|+|++||+|+ .|+++|.+++.|.+|+++|++++||.|. +|
T Consensus 2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~--~C 46 (46)
T 2eml_A 2 SSGSSGTGEKPYECS--VCGKAFSHRQSLSVHQRIHSGKKPSGPS--SG 46 (46)
T ss_dssp CCCCCCSSCCSEECS--SSCCEESSHHHHHHHHGGGSSCCCSCSS--CC
T ss_pred CccCCcCCCCCeeCC--CcCCccCCHHHHHHHHHHhcCCCCCCCC--CC
Confidence 699999999999995 5999999999999999999999999994 57
No 179
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A
Probab=99.14 E-value=9.8e-12 Score=99.86 Aligned_cols=45 Identities=38% Similarity=0.530 Sum_probs=41.3
Q ss_pred ccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeeccccc
Q psy8969 1154 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFC 1202 (1230)
Q Consensus 1154 ~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~~e~C 1202 (1230)
+|+++|++++||+|+ .|+++|.+++.|++|+++|+|++||+|+ .|
T Consensus 2 ~H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~~~C~--~C 46 (46)
T 2emk_A 2 SSGSSGTGEKPYECK--ECGKAFSQTTHLIQHQRVHTGEKPSGPS--SG 46 (46)
T ss_dssp CCCCCCSSSCSCBCS--SSCCBCSCHHHHHHHHHHHSSCCCSSCC--CC
T ss_pred CCCCccCCCCceECC--CCCchhCCHHHHHHHHHHcCCCCCCCCC--CC
Confidence 699999999999995 5999999999999999999999999994 56
No 180
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.14 E-value=9e-12 Score=100.00 Aligned_cols=46 Identities=28% Similarity=0.413 Sum_probs=41.6
Q ss_pred hccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeeccccc
Q psy8969 1153 KVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFC 1202 (1230)
Q Consensus 1153 k~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~~e~C 1202 (1230)
.+|+++|+|++||+|+ .|+++|.+++.|.+|+++|+|++||.|+ +|
T Consensus 1 ~~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~--~c 46 (46)
T 2ytj_A 1 GSSGSSGTGEKPYICA--ECGKAFTIRSNLIKHQKIHTKQKPSGPS--SG 46 (46)
T ss_dssp CCSSCTTSSCCSEECS--SSCCEESSHHHHHHHHHHTSCCCCSSCS--CC
T ss_pred CCcccCCCCCcCeECC--CCChhhCCHHHHHHHHHHcCCCCCCCCC--CC
Confidence 3699999999999995 5999999999999999999999999994 56
No 181
>3f8t_A Predicted ATPase involved in replication control, CDC46/MCM family; helicase, MCM homolog, DNA replication, ATP-binding, DNA-binding; 1.90A {Methanopyrus kandleri AV19}
Probab=99.14 E-value=9.2e-11 Score=138.16 Aligned_cols=197 Identities=14% Similarity=0.161 Sum_probs=115.8
Q ss_pred HHHhhhhcccccChHHHHHHHHHHHHHhhhcCCCCC-ceEEEeCCCCCCchHHHHHH-HHHhCCCeEEEecCCcchhHHH
Q psy8969 346 TQAAKILDDDHYGMEDVKKRILEFIAVSQLKGTTQG-KILCFYGPPGVGKTSIAKSI-ARALNREYFRFSVGGMSDVAEI 423 (1230)
Q Consensus 346 ~~~~~~l~~d~~G~~~vK~~i~e~l~~~~~~~~~~~-~~llL~GPPG~GKTslak~i-A~~l~~~~~~~~~~~~~d~~~i 423 (1230)
....+-+.. +||++++|+.|+=.++-...+ .++ -.+||.|+||| ||+||++| ++.+.+..+. + +-......+
T Consensus 206 ~~l~~sIap-I~G~e~vK~aLll~L~GG~~k--~rgdihVLL~G~PGt-KS~Lar~i~~~i~pR~~ft-~-g~~ss~~gL 279 (506)
T 3f8t_A 206 TTFARAIAP-LPGAEEVGKMLALQLFSCVGK--NSERLHVLLAGYPVV-CSEILHHVLDHLAPRGVYV-D-LRRTELTDL 279 (506)
T ss_dssp HHHHHHHCC-STTCHHHHHHHHHHHTTCCSS--GGGCCCEEEESCHHH-HHHHHHHHHHHTCSSEEEE-E-GGGCCHHHH
T ss_pred HHHHHHhcc-cCCCHHHHHHHHHHHcCCccc--cCCceeEEEECCCCh-HHHHHHHHHHHhCCCeEEe-c-CCCCCccCc
Confidence 445556777 999999998877665321000 111 25999999999 99999999 8877664332 2 211222233
Q ss_pred hhccccccc--cCchhHHHHHHhhcCCCCEEEEecccccCCCCCCChhhHHHhhcChhhhhhhhhhccCccccCCceEEE
Q psy8969 424 KGHRRTYVG--AMPGKVIQCMKKTKTENPLVLIDEVDKIGKGYSGDPASALLEMLDPEQNANFLDHYLDVPVDLSRVLFI 501 (1230)
Q Consensus 424 ~g~~~~~~g--~~~g~i~~~~~~~~~~~pvillDEIDk~~~~~~~~~~~all~~ld~~q~~~f~d~~~~~~~d~s~v~~I 501 (1230)
.+.-+.-.| -.||.+. ...+.|+|||||+++. .+..++|++.|+..+-. +. +..++ .++.+|
T Consensus 280 t~s~r~~tG~~~~~G~l~------LAdgGvl~lDEIn~~~----~~~qsaLlEaMEe~~Vt--I~---G~~lp-arf~VI 343 (506)
T 3f8t_A 280 TAVLKEDRGWALRAGAAV------LADGGILAVDHLEGAP----EPHRWALMEAMDKGTVT--VD---GIALN-ARCAVL 343 (506)
T ss_dssp SEEEEESSSEEEEECHHH------HTTTSEEEEECCTTCC----HHHHHHHHHHHHHSEEE--ET---TEEEE-CCCEEE
T ss_pred eEEEEcCCCcccCCCeeE------EcCCCeeehHhhhhCC----HHHHHHHHHHHhCCcEE--EC---CEEcC-CCeEEE
Confidence 322000011 1355542 2356899999999973 34578999998754321 22 22333 478999
Q ss_pred EecCCCC-----------CCCHhhhcccce-eecCCCCHHHHH----------HHHHHhhcchhHHhcCCCCCCcccCHH
Q psy8969 502 CTANVID-----------TIPEPLRDRMEM-IDVSGYVAEEKV----------AIAAQYLIPQAMKESGLSPEQITLEPS 559 (1230)
Q Consensus 502 ~TaN~~~-----------~I~~~L~~R~~~-i~~~~~~~~e~~----------~i~~~~l~~~~~~~~gl~~~~i~~~~~ 559 (1230)
+|+|+.. .||+||+|||++ +.+-+|...+.. ..+++|+. ..++.-+ .+.++++
T Consensus 344 AA~NP~~~yd~~~s~~~~~Lp~alLDRFDLi~i~~d~pd~e~d~e~~~~~ls~e~L~~yi~--~ar~~~~---~p~ls~e 418 (506)
T 3f8t_A 344 AAINPGEQWPSDPPIARIDLDQDFLSHFDLIAFLGVDPRPGEPEEQDTEVPSYTLLRRYLL--YAIREHP---APELTEE 418 (506)
T ss_dssp EEECCCC--CCSCGGGGCCSCHHHHTTCSEEEETTC--------------CCHHHHHHHHH--HHHHHCS---CCEECHH
T ss_pred EEeCcccccCCCCCccccCCChHHhhheeeEEEecCCCChhHhhcccCCCCCHHHHHHHHH--HHHhcCC---CceeCHH
Confidence 9999875 899999999986 455666654331 11222210 0110111 5678899
Q ss_pred HHHHHHHHhh
Q psy8969 560 AIQVLIKNYC 569 (1230)
Q Consensus 560 ~~~~li~~~~ 569 (1230)
+..+|++.|.
T Consensus 419 a~~yI~~~y~ 428 (506)
T 3f8t_A 419 ARKRLEHWYE 428 (506)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8888887654
No 182
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Probab=99.14 E-value=1.1e-11 Score=99.52 Aligned_cols=45 Identities=33% Similarity=0.466 Sum_probs=41.4
Q ss_pred ccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeeccccc
Q psy8969 1154 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFC 1202 (1230)
Q Consensus 1154 ~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~~e~C 1202 (1230)
+|+++|++++||+|+ .|+|+|.+++.|.+|+++|++++||+|+ +|
T Consensus 2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~--~c 46 (46)
T 2ema_A 2 SSGSSGTGEKRYKCN--ECGKVFSRNSQLSQHQKIHTGEKPSGPS--SG 46 (46)
T ss_dssp CSCSSCTTSCCEECS--SSCCEESSHHHHHHHHTGGGCCCCCSSS--CC
T ss_pred CCccCCCCCcCcCCC--CCcchhCCHHHHHHHHHhcCCCCCCCCC--CC
Confidence 699999999999995 5999999999999999999999999994 56
No 183
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.14 E-value=1.1e-11 Score=99.34 Aligned_cols=45 Identities=31% Similarity=0.410 Sum_probs=41.4
Q ss_pred ccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeeccccc
Q psy8969 1154 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFC 1202 (1230)
Q Consensus 1154 ~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~~e~C 1202 (1230)
+|+++|++++||+|+ .|+++|.+++.|++|+++|++++||+|+ +|
T Consensus 2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~--~C 46 (46)
T 2eq4_A 2 SSGSSGTGEKLYNCK--ECGKSFSRAPCLLKHERLHSGEKPSGPS--SG 46 (46)
T ss_dssp CCCCCSSCCCCCCBT--TTTBCCSCHHHHHHHHHHCCSSSCCCCC--CC
T ss_pred CCcccCCCCCCeECC--CCCCccCchHHHHHHHHhcCCCCCCCCC--CC
Confidence 699999999999995 5999999999999999999999999994 56
No 184
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.14 E-value=1.2e-11 Score=99.16 Aligned_cols=45 Identities=31% Similarity=0.416 Sum_probs=41.3
Q ss_pred ccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeeccccc
Q psy8969 1154 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFC 1202 (1230)
Q Consensus 1154 ~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~~e~C 1202 (1230)
+|+++|++++||+|+ .|+++|.+++.|.+|+++|++++||.|+ +|
T Consensus 2 ~H~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~--~C 46 (46)
T 2eop_A 2 SSGSSGTGEKPHECR--ECGKSFSFNSQLIVHQRIHTGENPSGPS--SG 46 (46)
T ss_dssp CCCCSCCCCCSCBCT--TTCCBCSSHHHHHHHHTTTTTSCCSCCC--CC
T ss_pred CCccccCCCCCeeCC--CCCchhCCHHHHHHHHHHcCCCCCCCCC--CC
Confidence 699999999999995 5999999999999999999999999994 56
No 185
>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*
Probab=99.14 E-value=8.2e-12 Score=104.19 Aligned_cols=52 Identities=15% Similarity=0.197 Sum_probs=42.2
Q ss_pred CCCCCCchhhhccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEe
Q psy8969 1143 KKTFSSAHHMKVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYR 1196 (1230)
Q Consensus 1143 gK~F~s~s~Lk~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~ 1196 (1230)
+|.|...++|..|+++|+|++||.|+ .|+++|.+++.|.+|+++|+|++||.
T Consensus 3 ~k~~~~~~~l~~h~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~kp~~ 54 (54)
T 1yui_A 3 AKRAKHPPGTEKPRSRSQSEQPATCP--ICYAVIRQSRNLRRHLELRHFAKPGV 54 (54)
T ss_dssp CCCCSCSSCCCCCHHHHTSSCCEECT--TTCCEESSHHHHHHHHHHHTTTSCCC
T ss_pred ccccCCCcchhhHHHhcCCCCCccCC--CCCcccCCHHHHHHHHHHhccCCCCC
Confidence 56788888888888888888888884 58888888888888888888888873
No 186
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.13 E-value=8.4e-12 Score=100.27 Aligned_cols=46 Identities=28% Similarity=0.364 Sum_probs=41.9
Q ss_pred hccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeeccccc
Q psy8969 1153 KVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFC 1202 (1230)
Q Consensus 1153 k~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~~e~C 1202 (1230)
++|+++|+|++||+|+ .|+++|.+++.|.+|+++|++++||+|+ .|
T Consensus 1 ~~H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~~~C~--~C 46 (46)
T 2eoo_A 1 GSSGSSGSGERPYGCN--ECGKNFGRHSHLIEHLKRHFREKSSGPS--SG 46 (46)
T ss_dssp CCCCCCCSCCCCEECS--SSCCEESSHHHHHHHHHHHHSTTSSCCS--CC
T ss_pred CCCCCCCCCCCCEEcc--ccCcccCCHHHHHHHHHHHcCCCCCCCC--CC
Confidence 3799999999999995 5999999999999999999999999994 56
No 187
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.13 E-value=1.2e-11 Score=99.27 Aligned_cols=45 Identities=31% Similarity=0.546 Sum_probs=41.5
Q ss_pred ccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeeccccc
Q psy8969 1154 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFC 1202 (1230)
Q Consensus 1154 ~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~~e~C 1202 (1230)
+|+++|++++||+|+ .|+++|.+++.|.+|+++|+|++||.|+ +|
T Consensus 2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~--~c 46 (46)
T 2ep2_A 2 SSGSSGTGEKPYECS--ICGKSFTKKSQLHVHQQIHTGEKPSGPS--SG 46 (46)
T ss_dssp CSSSCSSCCCSEECS--SSCCEESSHHHHHHHHHTTSSCCSCCSC--CC
T ss_pred CCCCCCCCCcCcCCC--CCCcccCCHHHHHHHHHHhCCCCCCCCC--CC
Confidence 699999999999995 5999999999999999999999999994 56
No 188
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.13 E-value=1.4e-11 Score=98.82 Aligned_cols=45 Identities=31% Similarity=0.517 Sum_probs=41.4
Q ss_pred ccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeeccccc
Q psy8969 1154 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFC 1202 (1230)
Q Consensus 1154 ~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~~e~C 1202 (1230)
+|+++|++++||+|+ .|+++|.+++.|++|+++|++++||+|+ +|
T Consensus 2 ~H~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~--~C 46 (46)
T 2ytg_A 2 SSGSSGTGEKPFKCG--ECGKSYNQRVHLTQHQRVHTGEKPSGPS--SG 46 (46)
T ss_dssp CCCCCCSSCCSEECT--TTCCEESSSHHHHTTGGGGSSCCSSCSC--CC
T ss_pred CCCCCCCCCCCeECC--CCCcccCCHHHHHHHHHHcCCCCCCCCC--CC
Confidence 699999999999995 5999999999999999999999999994 57
No 189
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.13 E-value=1.1e-11 Score=99.50 Aligned_cols=46 Identities=26% Similarity=0.356 Sum_probs=41.9
Q ss_pred hccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeeccccc
Q psy8969 1153 KVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFC 1202 (1230)
Q Consensus 1153 k~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~~e~C 1202 (1230)
.+|+++|++++||+|+ .|+++|.+++.|.+|+++|++++||+|+ +|
T Consensus 1 ~~H~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~--~C 46 (46)
T 2em5_A 1 GSSGSSGSSTKSHQCH--ECGRGFTLKSHLNQHQRIHTGEKPSGPS--SG 46 (46)
T ss_dssp CCCCCCCCCSCSEECS--SSCCEESSHHHHHHHHTTTSCSCCSSCC--CC
T ss_pred CCCcCCCCCCCCeECC--cCCCccCCHHHHHHHHHHhCCCCCCCCC--CC
Confidence 3799999999999995 5999999999999999999999999994 57
No 190
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.13 E-value=1.2e-11 Score=99.15 Aligned_cols=45 Identities=33% Similarity=0.492 Sum_probs=41.4
Q ss_pred ccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeeccccc
Q psy8969 1154 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFC 1202 (1230)
Q Consensus 1154 ~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~~e~C 1202 (1230)
+|+++|++++||+|+ .|+++|.+++.|.+|+++|++++||+|+ +|
T Consensus 2 ~H~~~H~~~~~~~C~--~C~k~F~~~~~L~~H~~~H~~~~~~~C~--~C 46 (46)
T 2eoe_A 2 SSGSSGTGEKPYKCN--ECGKVFTQNSHLANHQRIHTGVKPSGPS--SG 46 (46)
T ss_dssp CCSSCCCCCCSSEET--TTTEECSSHHHHHHHHGGGSCCCSCSSC--CC
T ss_pred CCCCCCCCCCCeECC--CcChhhCCHHHHHHHHHHcCCCCCCCCC--CC
Confidence 699999999999995 5999999999999999999999999994 56
No 191
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.13 E-value=1.3e-11 Score=98.93 Aligned_cols=46 Identities=39% Similarity=0.545 Sum_probs=42.0
Q ss_pred hccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeeccccc
Q psy8969 1153 KVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFC 1202 (1230)
Q Consensus 1153 k~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~~e~C 1202 (1230)
++|+++|++++||+|+ .|+++|.+++.|.+|+++|++++||+|+ +|
T Consensus 1 ~~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~--~C 46 (46)
T 2eme_A 1 GSSGSSGSGEKPYVCD--YCGKAFGLSAELVRHQRIHTGEKPSGPS--SG 46 (46)
T ss_dssp CCCCCTTCCCCSEECS--SSCCEESSHHHHHHHHGGGCCCSCCSSC--CC
T ss_pred CCCCCCCCCCCCeECC--CCChhhCCHHHHHHHHHhcCCCCCCCCC--CC
Confidence 3799999999999995 5999999999999999999999999994 57
No 192
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.13 E-value=1.2e-11 Score=99.17 Aligned_cols=45 Identities=33% Similarity=0.464 Sum_probs=41.2
Q ss_pred ccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeeccccc
Q psy8969 1154 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFC 1202 (1230)
Q Consensus 1154 ~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~~e~C 1202 (1230)
+|+++|++++||+|+ .|+++|.+++.|++|+++|++++||+|+ +|
T Consensus 2 ~H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~~~C~--~c 46 (46)
T 2eq0_A 2 SSGSSGTGEKPYKCH--ECGKVFRRNSHLARHQLIHTGEKPSGPS--SG 46 (46)
T ss_dssp CCCCCTTCCCCEECT--TTCCEESSHHHHHHHHTTTCCCCCSCCS--CC
T ss_pred CCCcCCCCCCCeECC--CCCchhCCHHHHHHHHHHcCCCCCCCCC--CC
Confidence 589999999999995 5999999999999999999999999994 66
No 193
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.13 E-value=1.4e-11 Score=98.86 Aligned_cols=45 Identities=29% Similarity=0.448 Sum_probs=41.2
Q ss_pred ccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeeccccc
Q psy8969 1154 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFC 1202 (1230)
Q Consensus 1154 ~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~~e~C 1202 (1230)
.|+++|++++||+|+ .|+|+|.+++.|++|+++|++++||+|+ +|
T Consensus 2 ~H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~~~C~--~c 46 (46)
T 2emf_A 2 SSGSSGTGGKHFECT--ECGKAFTRKSTLSMHQKIHTGEKPSGPS--SG 46 (46)
T ss_dssp CCCSSSSSSCCEECS--SSCCEESCHHHHHHHGGGTSCSSCSCCC--CC
T ss_pred ccccccCCCCCeECC--CCCchhCCHHHHHHHHHHhCCCCCCCCC--CC
Confidence 589999999999995 5999999999999999999999999994 56
No 194
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.13 E-value=1.3e-11 Score=99.03 Aligned_cols=45 Identities=27% Similarity=0.274 Sum_probs=41.4
Q ss_pred ccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeeccccc
Q psy8969 1154 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFC 1202 (1230)
Q Consensus 1154 ~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~~e~C 1202 (1230)
+|+++|++++||+|+ .|+++|.+++.|++|+++|++++||+|+ .|
T Consensus 2 ~H~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~--~C 46 (46)
T 2en8_A 2 SSGSSGSGEKSHTCD--ECGKNFCYISALRIHQRVHMGEKCSGPS--SG 46 (46)
T ss_dssp CCCCCCCCCSSEECT--TTCCEESSHHHHHHHHTTTCCSCSSCCS--CC
T ss_pred CccccCCCCCCeECC--CcCcccCCHHHHHHHHHHhCCCCCCCCC--CC
Confidence 699999999999995 5999999999999999999999999994 56
No 195
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.12 E-value=1.4e-11 Score=98.90 Aligned_cols=45 Identities=36% Similarity=0.507 Sum_probs=41.4
Q ss_pred ccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeeccccc
Q psy8969 1154 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFC 1202 (1230)
Q Consensus 1154 ~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~~e~C 1202 (1230)
.|+++|++++||+|+ .|+++|.+++.|++|+++|++++||+|. +|
T Consensus 2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~--~C 46 (46)
T 2ene_A 2 SSGSSGTGEKPYKCN--ECGKVFRHNSYLSRHQRIHTGEKPSGPS--SG 46 (46)
T ss_dssp CCCSSCCCSSSEECS--SSCCEESSHHHHHHHHTTTCCCCCCSCC--CC
T ss_pred CcccCCCCCCCeECC--CCCchhCChHHHHHHHhhcCCCCCCCCC--CC
Confidence 599999999999995 5999999999999999999999999994 57
No 196
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.12 E-value=1.5e-11 Score=98.55 Aligned_cols=45 Identities=40% Similarity=0.550 Sum_probs=41.2
Q ss_pred ccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeeccccc
Q psy8969 1154 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFC 1202 (1230)
Q Consensus 1154 ~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~~e~C 1202 (1230)
+|+++|++++||+|+ .|+++|.+++.|.+|+++|++++||.|. +|
T Consensus 2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~--~C 46 (46)
T 2ytr_A 2 SSGSSGTGEKPYKCN--ECGKAFSQTSKLARHQRIHTGEKPSGPS--SG 46 (46)
T ss_dssp CSSCCCSSCCTTCCT--TTCCCCSSHHHHHHHHTTTTTCSCCCSC--CC
T ss_pred CCCcCCCCCcCcCCC--CCCCccCCHHHHHHHHHhcCCCCCCCCC--CC
Confidence 699999999999995 5999999999999999999999999994 57
No 197
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.12 E-value=1.9e-11 Score=98.20 Aligned_cols=45 Identities=29% Similarity=0.408 Sum_probs=40.7
Q ss_pred ccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeeccccc
Q psy8969 1154 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFC 1202 (1230)
Q Consensus 1154 ~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~~e~C 1202 (1230)
.|+++|++++||+|+ .|+++|.+++.|.+|+++|++++||+|. +|
T Consensus 2 ~h~~~h~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~~~~~C~--~C 46 (46)
T 2elz_A 2 SSGSSGSVEKPYKCE--DCGKGYNRRLNLDMHQRVHMGEKTSGPS--SG 46 (46)
T ss_dssp CCCSCCCCCSSCBCS--SSCCBCSSHHHHHHHGGGGGSCCCCCSC--CC
T ss_pred CCCCCCCCCCCeeCc--ccCchhCCHHHHHHHHHhcCCCCCCCCC--CC
Confidence 489999999999995 5999999999999999999999999994 57
No 198
>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.12 E-value=1.4e-11 Score=98.91 Aligned_cols=46 Identities=35% Similarity=0.521 Sum_probs=42.0
Q ss_pred hccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeeccccc
Q psy8969 1153 KVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFC 1202 (1230)
Q Consensus 1153 k~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~~e~C 1202 (1230)
.+|+++|+|++||+|+ .|+++|.+++.|.+|+++|++++||.|+ .|
T Consensus 1 ~~H~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~--~C 46 (46)
T 2en1_A 1 GSSGSSGSGEKPFKCE--ECGKRFTQNSQLHSHQRVHTGEKPSGPS--SG 46 (46)
T ss_dssp CCSTTCCCCCCSEEET--TTTEEESSHHHHHHHGGGGSCCCCSCCC--CC
T ss_pred CCcccCCCCCCCeeCC--CCCcccCCHHHHHHHHHHcCCCCCCCCC--CC
Confidence 3699999999999995 5999999999999999999999999994 56
No 199
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.12 E-value=1.4e-11 Score=98.94 Aligned_cols=43 Identities=35% Similarity=0.601 Sum_probs=40.0
Q ss_pred ccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeec
Q psy8969 1154 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCA 1198 (1230)
Q Consensus 1154 ~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~ 1198 (1230)
+|+++|++++||+|+ .|+++|.+++.|.+|+++|++++||.|+
T Consensus 2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~ 44 (46)
T 2ep3_A 2 SSGSSGTGEKPYRCA--ECGKAFTDRSNLFTHQKIHTGEKPSGPS 44 (46)
T ss_dssp CCCSSSSCCCSEECS--SSCCEESSHHHHHHHHTTTTTSCCCCTT
T ss_pred CCCCCCCCCCCeECC--CCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence 699999999999995 5999999999999999999999999994
No 200
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.12 E-value=1.1e-11 Score=99.38 Aligned_cols=45 Identities=33% Similarity=0.499 Sum_probs=41.4
Q ss_pred ccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeeccccc
Q psy8969 1154 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFC 1202 (1230)
Q Consensus 1154 ~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~~e~C 1202 (1230)
+|+++|++++||+|+ .|+++|.+++.|.+|+++|++++||+|+ +|
T Consensus 2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~--~C 46 (46)
T 2yu8_A 2 SSGSSGTGEKPYKCN--ECGKVFTQNSHLARHRRVHTGGKPSGPS--SG 46 (46)
T ss_dssp CCCCCCCCCSSEECS--SSCCEESSSHHHHHHTHHHHSCCCSCSC--CC
T ss_pred CcCcCCCCCCCeECC--cCCchhCCHHHHHHHHHhcCCCCCCCCC--CC
Confidence 699999999999995 5999999999999999999999999994 56
No 201
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.12 E-value=1.4e-11 Score=98.93 Aligned_cols=45 Identities=29% Similarity=0.443 Sum_probs=41.3
Q ss_pred ccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeeccccc
Q psy8969 1154 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFC 1202 (1230)
Q Consensus 1154 ~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~~e~C 1202 (1230)
+|+++|++++||+|+ .|+++|.+++.|.+|+++|+|++||.|+ +|
T Consensus 2 ~H~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~--~C 46 (46)
T 2eoq_A 2 SSGSSGTGEKPFKCD--ICGKSFCGRSRLNRHSMVHTAEKPSGPS--SG 46 (46)
T ss_dssp CCCCCSSSSCSCCCS--SSCCCCSSHHHHHHHHHHTTCCCSSSCC--CC
T ss_pred CCCCCCCCCCCcCCC--cCCchhCCHHHHHHHHHHcCCCCCCCCC--CC
Confidence 699999999999995 5999999999999999999999999994 56
No 202
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.12 E-value=1.2e-11 Score=99.29 Aligned_cols=45 Identities=38% Similarity=0.542 Sum_probs=41.3
Q ss_pred ccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeeccccc
Q psy8969 1154 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFC 1202 (1230)
Q Consensus 1154 ~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~~e~C 1202 (1230)
+|+++|++++||+|+ .|+++|.+++.|.+|+++|+|++||+|+ +|
T Consensus 2 ~H~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~--~c 46 (46)
T 2ytk_A 2 SSGSSGSGEKPYKCN--ECGKVFTQNSHLTNHWRIHTGEKPSGPS--SG 46 (46)
T ss_dssp CCCCCSSSSCSEECS--SSCCEESSHHHHHHHHHHHSSSSCSSCC--CC
T ss_pred CCcccCCCCCCEeCC--cCCCccCCHHHHHHHHHHHCCCCCCCCC--CC
Confidence 699999999999995 5999999999999999999999999994 66
No 203
>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=99.12 E-value=5.3e-12 Score=108.77 Aligned_cols=57 Identities=18% Similarity=0.459 Sum_probs=50.8
Q ss_pred hhccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeecccccCccccchhhHHHH
Q psy8969 1152 MKVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKH 1215 (1230)
Q Consensus 1152 Lk~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~~e~CGKsF~~ks~LkrH 1215 (1230)
|..|+++|+|++||+|+ .|+++|.+.+.|. ++|+|++||.|. +||+.|.+..++..|
T Consensus 2 L~~h~~~H~~~k~~~C~--~C~k~F~~~~~l~---~~H~~~k~~~C~--~C~k~f~~~~~~~~~ 58 (62)
T 1vd4_A 2 IETDERDSTNRASFKCP--VCSSTFTDLEANQ---LFDPMTGTFRCT--FCHTEVEEDESAMPK 58 (62)
T ss_dssp CCCCSSSCCSSSEEECS--SSCCEEEHHHHHH---HEETTTTEEBCS--SSCCBCEECTTCSCC
T ss_pred hhhHHHHcCCCCCccCC--CCCchhccHHHhH---hhcCCCCCEECC--CCCCccccCcccccc
Confidence 67899999999999996 5999999999987 899999999994 799999988776543
No 204
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.12 E-value=1.1e-11 Score=99.48 Aligned_cols=45 Identities=38% Similarity=0.524 Sum_probs=41.4
Q ss_pred ccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeeccccc
Q psy8969 1154 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFC 1202 (1230)
Q Consensus 1154 ~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~~e~C 1202 (1230)
+|+++|+|++||+|+ .|+++|.+++.|++|+++|+|++||+|+ +|
T Consensus 2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~--~C 46 (46)
T 2emp_A 2 SSGSSGTGVKPYMCN--ECGKAFSVYSSLTTHQVIHTGEKPSGPS--SG 46 (46)
T ss_dssp CCCSCSSCCCSEECS--SSCCEESCHHHHHHHHHHHHCCSCCSCC--CC
T ss_pred CcccccCCCcCeECC--CCCchhCCHHHHHHHHHHcCCCCCCCCC--CC
Confidence 699999999999995 5999999999999999999999999994 56
No 205
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.12 E-value=1.5e-11 Score=98.56 Aligned_cols=45 Identities=29% Similarity=0.466 Sum_probs=41.3
Q ss_pred ccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeeccccc
Q psy8969 1154 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFC 1202 (1230)
Q Consensus 1154 ~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~~e~C 1202 (1230)
+|+++|++++||+|+ .|+++|.+++.|++|+++|++++||+|. +|
T Consensus 2 ~H~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~--~C 46 (46)
T 2eov_A 2 SSGSSGTGEKPYKCS--DCGKSFTWKSRLRIHQKCHTGERHSGPS--SG 46 (46)
T ss_dssp CCCCCCSSCCSCBCS--SSCCBCSSHHHHHHHHHHHSCCSSCCSC--CC
T ss_pred CCCCCCCCCCCccCC--ccChhhCCHHHHHHHHHhcCCCCCCCCC--CC
Confidence 699999999999995 5999999999999999999999999994 57
No 206
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.12 E-value=1.1e-11 Score=99.36 Aligned_cols=45 Identities=36% Similarity=0.439 Sum_probs=41.1
Q ss_pred ccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeeccccc
Q psy8969 1154 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFC 1202 (1230)
Q Consensus 1154 ~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~~e~C 1202 (1230)
+|+++|++++||+|+ .|+++|.+++.|++|+++|++++||.|+ +|
T Consensus 2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~--~C 46 (46)
T 2emm_A 2 SSGSSGTGERPHKCN--ECGKSFIQSAHLIQHQRIHTGEKPSGPS--SG 46 (46)
T ss_dssp CCCSCSSCCCSEECS--SSCCEESSHHHHHHHHHHHSCCCTTSSS--CC
T ss_pred CCcCCcCCCCCeeCC--CCChhhCCHHHHHHHHHHhCCCCCCCCC--CC
Confidence 699999999999995 5999999999999999999999999994 57
No 207
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.12 E-value=1.2e-11 Score=99.16 Aligned_cols=45 Identities=40% Similarity=0.606 Sum_probs=41.3
Q ss_pred ccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeeccccc
Q psy8969 1154 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFC 1202 (1230)
Q Consensus 1154 ~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~~e~C 1202 (1230)
+|+++|++++||+|+ .|+++|.+++.|.+|+++|+|++||+|+ +|
T Consensus 2 ~H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~~~C~--~C 46 (46)
T 2emy_A 2 SSGSSGTGENPYECH--ECGKAFSRKYQLISHQRTHAGEKPSGPS--SG 46 (46)
T ss_dssp CCCCCCCSSCCEECS--SSCCEESSHHHHHHHHHHHTTSCCSCSS--CC
T ss_pred CCCCCCCCCcCcCCC--CCCcccCcHHHHHHHHHHcCCCCCCCCC--CC
Confidence 699999999999995 5999999999999999999999999994 56
No 208
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.11 E-value=1.1e-11 Score=99.58 Aligned_cols=45 Identities=36% Similarity=0.530 Sum_probs=41.2
Q ss_pred ccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeeccccc
Q psy8969 1154 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFC 1202 (1230)
Q Consensus 1154 ~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~~e~C 1202 (1230)
+|+++|++++||+|+ .|+|+|.+++.|++|+++|++++||.|+ +|
T Consensus 2 ~H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~~~C~--~c 46 (46)
T 2emh_A 2 SSGSSGTGERPYICT--VCGKAFTDRSNLIKHQKIHTGEKPSGPS--SG 46 (46)
T ss_dssp CCCCSCSCCCSEECT--TTCCEESSHHHHHHHHHHHHCSSCSSSC--CC
T ss_pred CCCCCCCCCCCcCCC--CCCchhCCHHHHHHHHHhcCCCCCCCCC--CC
Confidence 699999999999995 5999999999999999999999999994 56
No 209
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Probab=99.11 E-value=1.7e-11 Score=98.23 Aligned_cols=45 Identities=31% Similarity=0.465 Sum_probs=41.1
Q ss_pred ccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeeccccc
Q psy8969 1154 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFC 1202 (1230)
Q Consensus 1154 ~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~~e~C 1202 (1230)
+|+++|++++||+|+ .|+++|.+++.|++|+++|++++||+|. +|
T Consensus 2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~--~C 46 (46)
T 2em9_A 2 SSGSSGTGEKPYNCK--ECGKSFRWASCLLKHQRVHSGEKPSGPS--SG 46 (46)
T ss_dssp CSCCSCCCCCSEECS--SSCCEESSHHHHHHHGGGGTSCCCCSTT--CC
T ss_pred CCCCCCCCCcCeECC--ccccccCChHHHHHHHHHhCCCCCCCCC--CC
Confidence 599999999999995 5999999999999999999999999994 56
No 210
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A
Probab=99.11 E-value=1.6e-11 Score=98.55 Aligned_cols=45 Identities=33% Similarity=0.518 Sum_probs=40.6
Q ss_pred ccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeeccccc
Q psy8969 1154 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFC 1202 (1230)
Q Consensus 1154 ~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~~e~C 1202 (1230)
.|+++|++++||+|+ .|+|+|.+++.|.+|+++|++++||+|. +|
T Consensus 2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~--~C 46 (46)
T 2ely_A 2 SSGSSGTGEKPFKCV--ECGKGFSRRSALNVHHKLHTGEKPSGPS--SG 46 (46)
T ss_dssp CCCCCCCCCCSBCCS--SSCCCBSSTTHHHHHHHHHSCCSSCSCC--CC
T ss_pred CCCCCCCCCCCcccC--ccCcccCCHHHHHHHHHHcCCCCCCCCC--CC
Confidence 489999999999995 5999999999999999999999999994 56
No 211
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.11 E-value=1.8e-11 Score=98.20 Aligned_cols=45 Identities=36% Similarity=0.524 Sum_probs=40.4
Q ss_pred ccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeeccccc
Q psy8969 1154 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFC 1202 (1230)
Q Consensus 1154 ~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~~e~C 1202 (1230)
.|+++|++++||+|+ .|+|+|.+++.|++|+++|++++||+|+ +|
T Consensus 2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~--~C 46 (46)
T 2epz_A 2 SSGSSGTGEKPFDCI--DCGKAFSDHIGLNQHRRIHTGEKPSGPS--SG 46 (46)
T ss_dssp CCCSSCCCCCSBCCT--TTCCCBSSHHHHHHHHTTTTTCCCCSSC--CC
T ss_pred CCCCCcCCCCCeECC--CCCceeCCHHHHHHHHHHhCCCCCCCCC--CC
Confidence 489999999999995 5999999999999999999999999994 56
No 212
>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.11 E-value=1.4e-11 Score=98.90 Aligned_cols=45 Identities=36% Similarity=0.511 Sum_probs=41.2
Q ss_pred ccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeeccccc
Q psy8969 1154 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFC 1202 (1230)
Q Consensus 1154 ~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~~e~C 1202 (1230)
+|+++|++++||+|+ .|+++|.+++.|++|+++|+|++||+|+ .|
T Consensus 2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~--~C 46 (46)
T 2ytd_A 2 SSGSSGSGEKPYKCS--ECGKAFHRHTHLNEHRRIHTGYRPSGPS--SG 46 (46)
T ss_dssp CCCCCSCCCCSEECS--SSCCEESSHHHHHHHHHHHTCCCSSCSS--CC
T ss_pred CCccccCCCcCeECC--CCCCeeCChHHHHHHHHHcCCCCCCCCC--CC
Confidence 699999999999995 5999999999999999999999999994 56
No 213
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.11 E-value=1.4e-11 Score=97.80 Aligned_cols=44 Identities=36% Similarity=0.508 Sum_probs=40.1
Q ss_pred cccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeeccccc
Q psy8969 1155 HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFC 1202 (1230)
Q Consensus 1155 H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~~e~C 1202 (1230)
|+++|+|++||+|+ .|+++|.+++.|++|+++|++++||.|. +|
T Consensus 1 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~--~C 44 (44)
T 2emx_A 1 GSSGSSGEKPFGCS--CCEKAFSSKSYLLVHQQTHAEEKPSGPS--SG 44 (44)
T ss_dssp CCCCCSSCCCEECS--SSSCEESSHHHHHHHHHHHTSSCSCSCC--CC
T ss_pred CCCCcCCCcCccCC--CCCcccCCHHHHHHHHHHhCCCCCCCCC--CC
Confidence 88999999999995 5999999999999999999999999994 56
No 214
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.11 E-value=1.6e-11 Score=98.39 Aligned_cols=45 Identities=29% Similarity=0.338 Sum_probs=41.3
Q ss_pred ccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeeccccc
Q psy8969 1154 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFC 1202 (1230)
Q Consensus 1154 ~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~~e~C 1202 (1230)
+|+++|++++||+|+ .|+|+|.+++.|.+|+++|+|++||.|+ +|
T Consensus 2 ~H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~~~C~--~C 46 (46)
T 2epw_A 2 SSGSSGTGEKPCKCT--ECGKAFCWKSQLIMHQRTHVDDKHSGPS--SG 46 (46)
T ss_dssp CCCCCCCCCCSEECS--SSCCEESSSHHHHHHHHHCCSCCCSCCC--CC
T ss_pred cCcccCCCCCCeeCC--CCCCccCCHHHHHHHHHHhCCCCCCCCC--CC
Confidence 699999999999995 5999999999999999999999999994 56
No 215
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.11 E-value=2e-11 Score=98.08 Aligned_cols=45 Identities=38% Similarity=0.566 Sum_probs=40.2
Q ss_pred ccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeeccccc
Q psy8969 1154 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFC 1202 (1230)
Q Consensus 1154 ~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~~e~C 1202 (1230)
.|+++|++++||+|+ .|+++|.+++.|.+|+++|++++||+|. +|
T Consensus 2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~--~C 46 (46)
T 2ytq_A 2 SSGSSGAGEKPYGCS--ECGKAFSSKSYLIIHMRTHSGEKPSGPS--SG 46 (46)
T ss_dssp CCSSCSSCCCSCBCS--SSCCBCSCHHHHHHHHTTTCCSCSSCCC--CC
T ss_pred CCCcCcCCCCCcCCC--ccChhhCChHHHHHHHHHhCCCCCCCCC--CC
Confidence 488999999999995 5999999999999999999999999994 56
No 216
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}
Probab=99.10 E-value=2e-11 Score=98.03 Aligned_cols=45 Identities=38% Similarity=0.563 Sum_probs=40.9
Q ss_pred ccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeeccccc
Q psy8969 1154 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFC 1202 (1230)
Q Consensus 1154 ~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~~e~C 1202 (1230)
+|+++|++++||+|+ .|++.|.+++.|.+|+++|++++||.|. +|
T Consensus 2 ~h~~~h~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~--~C 46 (46)
T 2el6_A 2 SSGSSGAGVNPYKCS--QCEKSFSGKLRLLVHQRMHTREKPSGPS--SG 46 (46)
T ss_dssp CSCCSSCCCCSEECS--SSSCEESSHHHHHHHHGGGCCSSCCSCC--CC
T ss_pred CCCCCCCCCCCeECC--CCCcccCCHHHHHHHHHHcCCCCCCCCC--CC
Confidence 589999999999995 5999999999999999999999999994 56
No 217
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.10 E-value=2.4e-11 Score=95.31 Aligned_cols=42 Identities=40% Similarity=0.627 Sum_probs=38.6
Q ss_pred ccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEee
Q psy8969 1154 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 1197 (1230)
Q Consensus 1154 ~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C 1197 (1230)
+|+++|+|++||+|+ .|+++|.+++.|.+|+++|+|++||.|
T Consensus 1 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C 42 (42)
T 2ytb_A 1 GSSGSSGGEKPYRCD--QCGKAFSQKGSLIVHIRVHTGSGPSSG 42 (42)
T ss_dssp CCCCCCCSCCSBCCT--TTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred CCccccCCCCCeeCC--CccchhCCHHHHHHHHHHhCCCCCCCC
Confidence 589999999999995 599999999999999999999999988
No 218
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.10 E-value=1.9e-11 Score=98.03 Aligned_cols=45 Identities=33% Similarity=0.471 Sum_probs=40.3
Q ss_pred ccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeeccccc
Q psy8969 1154 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFC 1202 (1230)
Q Consensus 1154 ~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~~e~C 1202 (1230)
.|+++|++++||+|+ .|+|+|.+++.|++|+++|++++||.|+ +|
T Consensus 2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~--~C 46 (46)
T 2em7_A 2 SSGSSGTGEKPYKCE--ECGKGFICRRDLYTHHMVHTGEKPSGPS--SG 46 (46)
T ss_dssp CCCCSSSCCCSEECS--SSCCEESCHHHHHHHGGGGTTCCCSSTT--CC
T ss_pred CCCCCCCCCcCccCC--CccchhCCHHHHHHHHHHhCCCCCCCCC--CC
Confidence 489999999999995 5999999999999999999999999994 56
No 219
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Probab=99.10 E-value=2.1e-11 Score=95.69 Aligned_cols=41 Identities=37% Similarity=0.545 Sum_probs=37.6
Q ss_pred cccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEee
Q psy8969 1155 HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 1197 (1230)
Q Consensus 1155 H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C 1197 (1230)
|+++|+|++||+|+ .|+++|.+++.|.+|+++|+|++||+|
T Consensus 1 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C 41 (42)
T 2el5_A 1 GSSGSSGENPYECS--ECGKAFNRKDQLISHQRTHAGESGPSS 41 (42)
T ss_dssp CCSSSSSCCSEECS--SSCCEESSHHHHHHHHGGGCCCCSCCC
T ss_pred CCCCCCCCCCccCC--CcChhhCCHHHHHHHHHhcCCCCCCCC
Confidence 78899999999995 599999999999999999999999988
No 220
>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.09 E-value=1.6e-11 Score=98.60 Aligned_cols=45 Identities=42% Similarity=0.555 Sum_probs=41.2
Q ss_pred ccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeeccccc
Q psy8969 1154 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFC 1202 (1230)
Q Consensus 1154 ~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~~e~C 1202 (1230)
+|+++|++++||+|+ .|+++|.+++.|++|+++|++++||+|. +|
T Consensus 2 ~h~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~--~C 46 (46)
T 2en6_A 2 SSGSSGSGEKPYGCN--ECGKTFSQKSILSAHQRTHTGEKPSGPS--SG 46 (46)
T ss_dssp CCSCCCCSSCCEEET--TTTEEESSHHHHHHHHHHHSSCCCSSSC--CC
T ss_pred CCCCccCCCcCeECC--CCCcccCchHHHHHHHHHcCCCCCCCCC--CC
Confidence 699999999999995 5999999999999999999999999994 56
No 221
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.09 E-value=3e-11 Score=96.88 Aligned_cols=43 Identities=40% Similarity=0.590 Sum_probs=40.0
Q ss_pred ccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeec
Q psy8969 1154 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCA 1198 (1230)
Q Consensus 1154 ~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~ 1198 (1230)
+|+++|++++||+|+ .|+++|.+++.|.+|+++|++++||.|+
T Consensus 2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2eq2_A 2 SSGSSGTGGKPYQCN--ECGKAFSQTSKLARHQRVHTGEKPSGPS 44 (46)
T ss_dssp CCCCSSSSSCSSSCC--SSCCCCSSHHHHHHHGGGGCCCCCCCCC
T ss_pred CcccccCCCCCeECC--CCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence 699999999999995 5999999999999999999999999995
No 222
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.08 E-value=2.3e-11 Score=97.81 Aligned_cols=45 Identities=36% Similarity=0.530 Sum_probs=40.5
Q ss_pred ccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeeccccc
Q psy8969 1154 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFC 1202 (1230)
Q Consensus 1154 ~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~~e~C 1202 (1230)
.|+++|++++||+|+ .|+|+|.+++.|++|+++|++++||+|+ +|
T Consensus 2 ~h~~~h~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~--~C 46 (46)
T 2ytm_A 2 SSGSSGTGEKPYKCM--ECGKAFGDNSSCTQHQRLHTGQRPSGPS--SG 46 (46)
T ss_dssp CSCCCCSSCCSSSBT--TTTBCCSSHHHHHHHHHHHHSCCCCCCC--CC
T ss_pred CCCcCCCCCCCcCCC--CCCchhCCHHHHHHHHHHcCCCCCCCCC--CC
Confidence 488999999999995 5999999999999999999999999994 56
No 223
>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.08 E-value=2.4e-11 Score=97.52 Aligned_cols=45 Identities=29% Similarity=0.591 Sum_probs=41.0
Q ss_pred ccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeeccccc
Q psy8969 1154 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFC 1202 (1230)
Q Consensus 1154 ~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~~e~C 1202 (1230)
.|+++|++++||+|+ .|+++|.+++.|++|+++|++++||+|+ +|
T Consensus 2 ~H~~~h~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~--~C 46 (46)
T 2ysp_A 2 SSGSSGTGEKPYKCE--KCGKGYNSKFNLDMHQKVHTGERPSGPS--SG 46 (46)
T ss_dssp CCCCCCSSCCSEEET--TTTEEESCHHHHHHHHTTSCSCCSSCCS--CC
T ss_pred CCCcCCCCCCCeECC--CCCCccCCHHHHHHHHHhhCCCCCCCCC--CC
Confidence 489999999999995 5999999999999999999999999994 57
No 224
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.08 E-value=3.1e-11 Score=96.87 Aligned_cols=43 Identities=35% Similarity=0.587 Sum_probs=40.0
Q ss_pred ccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeec
Q psy8969 1154 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCA 1198 (1230)
Q Consensus 1154 ~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~ 1198 (1230)
+|+++|++++||+|+ .|+++|.+++.|.+|+++|++++||+|+
T Consensus 2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2yth_A 2 SSGSSGSGEKPFQCE--ECGKRFTQNSHLHSHQRVHTGEKPSGPS 44 (46)
T ss_dssp CCCSCCCCSSSBCCS--SSCCCBSSHHHHHHHGGGGTTCCCSSCC
T ss_pred CcccCCCCCcCCCCC--CCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence 699999999999995 5999999999999999999999999995
No 225
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.08 E-value=2.4e-11 Score=97.51 Aligned_cols=45 Identities=36% Similarity=0.526 Sum_probs=40.6
Q ss_pred ccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeeccccc
Q psy8969 1154 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFC 1202 (1230)
Q Consensus 1154 ~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~~e~C 1202 (1230)
.|+++|++++||+|+ .|+++|.+++.|.+|+++|++++||+|. +|
T Consensus 2 ~h~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~--~C 46 (46)
T 2enc_A 2 SSGSSGSGEKPFKCE--ECGKGFYTNSQCYSHQRSHSGEKPSGPS--SG 46 (46)
T ss_dssp CCSSCCCCCCSEECS--SSCCEESSHHHHHHHHHHSCCSSCCSSC--CC
T ss_pred CCCCCCCCCCCcCCC--CCCCcCCChHHHHHHHHHhCCCCCCCCC--CC
Confidence 489999999999995 5999999999999999999999999994 56
No 226
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.08 E-value=3e-11 Score=96.88 Aligned_cols=43 Identities=35% Similarity=0.534 Sum_probs=39.8
Q ss_pred ccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeec
Q psy8969 1154 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCA 1198 (1230)
Q Consensus 1154 ~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~ 1198 (1230)
+|+++|++++||+|+ .|+++|.+++.|++|+++|++++||.|+
T Consensus 2 ~H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2enf_A 2 SSGSSGTGEKPYKCN--ECGKVFTQNSHLVRHRGIHTGEKPSGPS 44 (46)
T ss_dssp CCCCCCCCCCSCBCS--SSCCBCSSHHHHHHHHTTTTTSSCCCCS
T ss_pred CCCcCCCCCcCeECC--CCCcccCCHHHHHHHHHhhCCCCCCCCC
Confidence 699999999999995 5999999999999999999999999995
No 227
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.08 E-value=3e-11 Score=95.75 Aligned_cols=42 Identities=36% Similarity=0.554 Sum_probs=39.0
Q ss_pred ccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEee
Q psy8969 1154 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 1197 (1230)
Q Consensus 1154 ~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C 1197 (1230)
+|+++|++++||+|+ .|++.|.+++.|.+|+++|+|++||.|
T Consensus 2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C 43 (44)
T 2en7_A 2 SSGSSGTGMKPYVCN--ECGKAFRSKSYLIIHTRTHTGESGPSS 43 (44)
T ss_dssp CSCCCSSSSSSSCCT--TTCCCCSSHHHHHHHHTTTCCSSSSCC
T ss_pred CCCcCCCCCcCeECC--CCCCccCCHHHHHHHhhhcCCCCCCCC
Confidence 689999999999995 599999999999999999999999998
No 228
>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.07 E-value=2.5e-11 Score=97.42 Aligned_cols=45 Identities=20% Similarity=0.130 Sum_probs=40.8
Q ss_pred ccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeeccccc
Q psy8969 1154 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFC 1202 (1230)
Q Consensus 1154 ~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~~e~C 1202 (1230)
.|+++|++++||+|+ .|+++|.+++.|.+|+++|+|++||+|. +|
T Consensus 2 ~H~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~--~C 46 (46)
T 2yso_A 2 SSGSSGSREKSHQCR--ECGEIFFQYVSLIEHQVLHMGQKNSGPS--SG 46 (46)
T ss_dssp CCSCCSSCCCCEECT--TTCCEESSHHHHHHHHHHHSCCSCCCTT--CC
T ss_pred CcccccCCCCCEEcc--ccChhhCCHHHHHHHHHHhCCCCCCCCC--CC
Confidence 589999999999995 5999999999999999999999999994 56
No 229
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.07 E-value=2.8e-11 Score=97.13 Aligned_cols=43 Identities=37% Similarity=0.553 Sum_probs=39.7
Q ss_pred ccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeec
Q psy8969 1154 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCA 1198 (1230)
Q Consensus 1154 ~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~ 1198 (1230)
+|+++|++++||+|+ .|+|+|.+++.|++|+++|++++||.|+
T Consensus 2 ~H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2ytp_A 2 SSGSSGTGERHYECS--ECGKAFARKSTLIMHQRIHTGEKPSGPS 44 (46)
T ss_dssp CCCCSSCCCCCEECS--SSCCEESSHHHHHHHHTTTSCCCCCSSC
T ss_pred CcccCcCCCCCeECC--cCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence 589999999999995 5999999999999999999999999995
No 230
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.07 E-value=2.6e-11 Score=97.32 Aligned_cols=44 Identities=36% Similarity=0.609 Sum_probs=40.1
Q ss_pred hccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeec
Q psy8969 1153 KVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCA 1198 (1230)
Q Consensus 1153 k~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~ 1198 (1230)
++|+++|++++||+|+ .|+++|.+++.|.+|+++|++++||+|+
T Consensus 1 ~~H~~~H~~~~~~~C~--~C~k~F~~~~~L~~H~~~H~~~~~~~C~ 44 (46)
T 2em3_A 1 GSSGSSGTGEKPYECK--VCSKAFTQKAHLAQHQKTHTGEKPSGPS 44 (46)
T ss_dssp CCCCCCCSSCCSEECS--SSCCEESSHHHHHHHHHHHCCCCCCCSC
T ss_pred CCCCCCCCCCcCeECC--CCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence 3699999999999995 5999999999999999999999999995
No 231
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.07 E-value=3.4e-11 Score=96.48 Aligned_cols=43 Identities=33% Similarity=0.573 Sum_probs=39.8
Q ss_pred ccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeec
Q psy8969 1154 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCA 1198 (1230)
Q Consensus 1154 ~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~ 1198 (1230)
+|+++|++++||+|+ .|+++|.+++.|.+|+++|++++||.|+
T Consensus 2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2ep1_A 2 SSGSSGTGEKPYECS--DCGKSFIKKSQLHVHQRIHTGENPSGPS 44 (46)
T ss_dssp CCCCCCSSCCSSCCS--SSCCCCSSHHHHHHHHGGGSSSCCCSSS
T ss_pred ccccCCCCCCCcCCC--CCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence 699999999999995 5999999999999999999999999995
No 232
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.07 E-value=2.8e-11 Score=96.11 Aligned_cols=42 Identities=24% Similarity=0.431 Sum_probs=38.1
Q ss_pred ccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEee
Q psy8969 1154 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 1197 (1230)
Q Consensus 1154 ~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C 1197 (1230)
+|+++|++++||+|+ .|+++|.+++.|.+|+++|++++||+|
T Consensus 2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C 43 (44)
T 2yu5_A 2 SSGSSGAGENPFKCS--KCDRVFTQRNYLVQHERTHARKSGPSS 43 (44)
T ss_dssp CCSCCCSCCCSEECS--SSSCEESSSHHHHHHHHHCCCCCSSCC
T ss_pred CCccccCCCCCeECC--CCCchhCCHHHHHHHhHhcCCCCCCCC
Confidence 689999999999995 599999999999999999999999988
No 233
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.07 E-value=3.4e-11 Score=94.45 Aligned_cols=41 Identities=27% Similarity=0.421 Sum_probs=37.7
Q ss_pred cccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEee
Q psy8969 1155 HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 1197 (1230)
Q Consensus 1155 H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C 1197 (1230)
|+++|++++||+|+ .|+++|.+++.|.+|+++|++++||+|
T Consensus 1 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C 41 (42)
T 2yte_A 1 GSSGSSGEKPYSCA--ECKETFSDNNRLVQHQKMHTVKSGPSS 41 (42)
T ss_dssp CCSSSCSCCSCBCT--TTCCBCSSHHHHHHHHHHTSCCSSCCC
T ss_pred CCcCcCCCCCeECC--CCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence 78899999999995 599999999999999999999999988
No 234
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.07 E-value=3.5e-11 Score=96.63 Aligned_cols=43 Identities=37% Similarity=0.530 Sum_probs=39.8
Q ss_pred ccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeec
Q psy8969 1154 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCA 1198 (1230)
Q Consensus 1154 ~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~ 1198 (1230)
+|+++|++++||+|+ .|+++|.+++.|++|+++|++++||.|+
T Consensus 2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2em6_A 2 SSGSSGMGEKCYKCD--VCGKEFSQSSHLQTHQRVHTGEKPSGPS 44 (46)
T ss_dssp CCCSCCCCCCCCBCS--SSCCBCSSHHHHHHHHTTTSSSCCCCTT
T ss_pred CCccccCCCCCeECC--CCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence 699999999999995 5999999999999999999999999995
No 235
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.06 E-value=2.9e-11 Score=97.08 Aligned_cols=45 Identities=33% Similarity=0.457 Sum_probs=40.7
Q ss_pred ccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeeccccc
Q psy8969 1154 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFC 1202 (1230)
Q Consensus 1154 ~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~~e~C 1202 (1230)
.|+++|++++||+|+ .|+++|.+++.|++|+++|++++||+|. +|
T Consensus 2 ~h~~~h~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~--~C 46 (46)
T 2em8_A 2 SSGSSGSGEKPYKCV--ECGKGYKRRLDLDFHQRVHTGEKLSGPS--SG 46 (46)
T ss_dssp CCCCCCCSCCSEECS--SSCCEESSHHHHHHHHHHHHCCCCCCSC--CC
T ss_pred CCCCCCCCCCCeECc--ccCchhCCHHHHHHHHHHHcCCCCCCCC--CC
Confidence 489999999999995 5999999999999999999999999994 57
No 236
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.06 E-value=3.3e-11 Score=96.71 Aligned_cols=43 Identities=44% Similarity=0.644 Sum_probs=39.3
Q ss_pred ccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeec
Q psy8969 1154 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCA 1198 (1230)
Q Consensus 1154 ~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~ 1198 (1230)
.|+++|++++||+|+ .|+++|.+++.|++|+++|++++||+|+
T Consensus 2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2em4_A 2 SSGSSGTGQRPYECI--ECGKAFKTKSSLICHRRSHTGEKPSGPS 44 (46)
T ss_dssp CSCCCCCCSSSEECS--SSCCEESSHHHHHHHHHHHSSSSCCCCC
T ss_pred CCccccCCCcCcCCC--CCCCccCCHHHHHHHHHhcCCCCCCCCC
Confidence 589999999999995 5999999999999999999999999995
No 237
>4akg_A Glutathione S-transferase class-MU 26 kDa isozyme heavy chain cytoplasmic; motor protein, AAA+ protein, ASCE protein, P-loop ntpase; HET: ATP ADP; 3.30A {Schistosoma japonicum} PDB: 4ai6_A* 4akh_A* 4aki_A* 3qmz_A
Probab=99.06 E-value=1.6e-10 Score=161.35 Aligned_cols=196 Identities=15% Similarity=0.175 Sum_probs=117.1
Q ss_pred CceEEEeCCCCCCchHHH-HHHHHHhCCCeEEEecCCcchhHHHhhccccccccC---chhHHHHHHhh-cCCCCEEEEe
Q psy8969 381 GKILCFYGPPGVGKTSIA-KSIARALNREYFRFSVGGMSDVAEIKGHRRTYVGAM---PGKVIQCMKKT-KTENPLVLID 455 (1230)
Q Consensus 381 ~~~llL~GPPG~GKTsla-k~iA~~l~~~~~~~~~~~~~d~~~i~g~~~~~~g~~---~g~i~~~~~~~-~~~~pvillD 455 (1230)
++.+||+||||||||++| +.++...+.+++.++++..++...+.+.-..+.... .|.+ +... .....|||||
T Consensus 1267 ~~~vLL~GPpGtGKT~la~~~l~~~~~~~~~~infsa~ts~~~~~~~i~~~~~~~~~~~g~~---~~P~~~gk~~VlFiD 1343 (2695)
T 4akg_A 1267 KRGIILCGPPGSGKTMIMNNALRNSSLYDVVGINFSKDTTTEHILSALHRHTNYVTTSKGLT---LLPKSDIKNLVLFCD 1343 (2695)
T ss_dssp TCEEEEECSTTSSHHHHHHHHHHSCSSCEEEEEECCTTCCHHHHHHHHHHHBCCEEETTTEE---EEEBSSSSCEEEEEE
T ss_pred CCeEEEECCCCCCHHHHHHHHHhcCCCCceEEEEeecCCCHHHHHHHHHHHhhhccccCCcc---ccCCCCCceEEEEec
Confidence 467999999999999999 556655577888888776665444322111111000 0000 0000 1123489999
Q ss_pred cccccCCCCCC--ChhhHHHhhcChhhhhhhhhhccCccccCCceEEEEecCCC-----CCCCHhhhcccceeecCCCCH
Q psy8969 456 EVDKIGKGYSG--DPASALLEMLDPEQNANFLDHYLDVPVDLSRVLFICTANVI-----DTIPEPLRDRMEMIDVSGYVA 528 (1230)
Q Consensus 456 EIDk~~~~~~~--~~~~all~~ld~~q~~~f~d~~~~~~~d~s~v~~I~TaN~~-----~~I~~~L~~R~~~i~~~~~~~ 528 (1230)
|||....+..| .+...|.+++|. ..|.|.-......+.++.||+|+|++ ..|+++|++||.+|.++.++.
T Consensus 1344 Einmp~~d~yg~q~~lelLRq~le~---gg~yd~~~~~~~~~~~i~lIaA~Npp~~gGR~~l~~rllRrf~vi~i~~P~~ 1420 (2695)
T 4akg_A 1344 EINLPKLDKYGSQNVVLFLRQLMEK---QGFWKTPENKWVTIERIHIVGACNPPTDPGRIPMSERFTRHAAILYLGYPSG 1420 (2695)
T ss_dssp TTTCSCCCSSSCCHHHHHHHHHHHT---SSEECTTTCCEEEEESEEEEEEECCTTSTTCCCCCHHHHTTEEEEECCCCTT
T ss_pred ccccccccccCchhHHHHHHHHHhc---CCEEEcCCCcEEEecCEEEEEecCCCccCCCccCChhhhheeeEEEeCCCCH
Confidence 99976554323 244555555542 12222211122344689999999999 489999999999999999999
Q ss_pred HHHHHHHHHhhcchhHHhcCCCCCCcccCHHHHHHHHHHhhh-------------hhhHHHHHHHHHHHHH
Q psy8969 529 EEKVAIAAQYLIPQAMKESGLSPEQITLEPSAIQVLIKNYCR-------------ESGVRNLQKHIEKVTR 586 (1230)
Q Consensus 529 ~e~~~i~~~~l~~~~~~~~gl~~~~i~~~~~~~~~li~~~~~-------------e~gvR~l~~~i~~i~r 586 (1230)
++...|...++-. .+ ...++--.+.+..+...++-|.+ -..+|.|-|.+..+++
T Consensus 1421 ~~l~~I~~~il~~-~l---~~~~~v~~~~~~lv~ati~~y~~v~~~~~~~~k~HY~FnlRDLsrv~qGll~ 1487 (2695)
T 4akg_A 1421 KSLSQIYEIYYKA-IF---KLVPEFRSYTEPFARASVHLYNECKARYSTGLQSHYLFSPRELTRLVRGVYT 1487 (2695)
T ss_dssp THHHHHHHHHHHH-HT---TSSGGGGGGHHHHHHHHHHHHHHHHHHSCTTTCTTCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-Hh---ccCHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCcccCHHHHHHHHHHHHh
Confidence 9999988876632 11 12222223344444555544432 3457777776666654
No 238
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.06 E-value=4e-11 Score=94.21 Aligned_cols=41 Identities=32% Similarity=0.605 Sum_probs=36.9
Q ss_pred cccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEee
Q psy8969 1155 HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 1197 (1230)
Q Consensus 1155 H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C 1197 (1230)
|+++|++++||+|+ .|+++|.+++.|++|+++|++++||+|
T Consensus 2 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C 42 (42)
T 2eos_A 2 SSGSSGGEKPYPCE--ICGTRFRHLQTLKSHLRIHTGSGPSSG 42 (42)
T ss_dssp CCSCCSSSCCBCCS--SSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred CCcccCCCCCEECC--CCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence 78899999999995 599999999999999999999999887
No 239
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.05 E-value=4.4e-11 Score=95.85 Aligned_cols=43 Identities=35% Similarity=0.545 Sum_probs=39.8
Q ss_pred ccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeec
Q psy8969 1154 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCA 1198 (1230)
Q Consensus 1154 ~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~ 1198 (1230)
+|+++|++++||+|+ .|+++|.+++.|.+|+++|++++||+|+
T Consensus 2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~p~~C~ 44 (46)
T 2yts_A 2 SSGSSGTGEKPYICN--ECGKSFIQKSHLNRHRRIHTGEKPSGPS 44 (46)
T ss_dssp CCSCCCCSCCSEECS--SSCCEESSHHHHHHHGGGTSSCCSSCCC
T ss_pred CCCCCCCCCcCEECC--CCChhhCChHHHHHHHHhcCCCCCcCCC
Confidence 689999999999995 5999999999999999999999999995
No 240
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.05 E-value=4.3e-11 Score=96.26 Aligned_cols=45 Identities=38% Similarity=0.496 Sum_probs=40.7
Q ss_pred ccccccCCCCcccCCcccccccccCchhhhhhcc-cccCCCCEeeccccc
Q psy8969 1154 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIR-THTGEKPYRCAHEFC 1202 (1230)
Q Consensus 1154 ~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~R-tHTGEKPy~C~~e~C 1202 (1230)
.|+++|+|++||+|+ .|+++|.+++.|++|++ +|++++||+|. .|
T Consensus 2 ~H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~~H~~~k~~~C~--~C 47 (47)
T 2epx_A 2 SSGSSGTGKKPYECI--ECGKAFIQNTSLIRHWRYYHTGEKPSGPS--SG 47 (47)
T ss_dssp CCCCCCCCCCSBCCS--SSCCCBSSHHHHHHHHTTTTTTSCSSSCC--CC
T ss_pred ccccccCCCCCEECC--ccCchhCChHHHHHHhHhhcCCCCCCCCC--CC
Confidence 589999999999995 59999999999999999 99999999994 56
No 241
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.05 E-value=3.8e-11 Score=96.27 Aligned_cols=43 Identities=37% Similarity=0.575 Sum_probs=39.6
Q ss_pred ccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeec
Q psy8969 1154 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCA 1198 (1230)
Q Consensus 1154 ~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~ 1198 (1230)
+|+++|++++||+|+ .|+++|.+++.|++|+++|++++||+|+
T Consensus 2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2eq1_A 2 SSGSSGTGEKPYKCN--ECGKAFRAHSNLTTHQVIHTGEKPSGPS 44 (46)
T ss_dssp CCCCCCCCSCCCCCT--TTTCCCSSHHHHHHHHTTTCCSCCSSCC
T ss_pred CcccccCCCCCeECC--cCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence 699999999999995 5999999999999999999999999994
No 242
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.05 E-value=3.6e-11 Score=96.44 Aligned_cols=43 Identities=35% Similarity=0.544 Sum_probs=39.1
Q ss_pred ccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeec
Q psy8969 1154 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCA 1198 (1230)
Q Consensus 1154 ~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~ 1198 (1230)
+|+++|++++||+|+ .|+++|.+++.|++|+++|++++||.|+
T Consensus 2 ~H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2yti_A 2 SSGSSGTGEKPYKCN--ECGKVFTQNSHLARHRGIHTGEKPSGPS 44 (46)
T ss_dssp CCCCCCSCCCTTCCS--SSCCCCSSHHHHHHHHTTTSCSCCSSTT
T ss_pred CCCcCCCCCcCeECC--CCCcccCChhHHHHHhHhcCCCCCCCCC
Confidence 589999999999995 5999999999999999999999999994
No 243
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.05 E-value=3e-11 Score=96.83 Aligned_cols=43 Identities=40% Similarity=0.600 Sum_probs=39.2
Q ss_pred ccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeec
Q psy8969 1154 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCA 1198 (1230)
Q Consensus 1154 ~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~ 1198 (1230)
+|+++|++++||+|+ .|+++|.+++.|.+|+++|++++||+|+
T Consensus 2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2eow_A 2 SSGSSGTGEKPYKCN--ECGKAFRARSSLAIHQATHSGEKPSGPS 44 (46)
T ss_dssp CCCCCSCCCCCEECT--TSCCEESSHHHHHHHHHHHCCCSCSCTT
T ss_pred CccCCCCCCCCeecc--ccCChhcCHHHHHHHHHHcCCCCCCCCC
Confidence 689999999999995 5999999999999999999999999995
No 244
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.05 E-value=3.4e-11 Score=95.43 Aligned_cols=42 Identities=38% Similarity=0.596 Sum_probs=38.0
Q ss_pred ccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEee
Q psy8969 1154 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 1197 (1230)
Q Consensus 1154 ~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C 1197 (1230)
+|+++|++++||+|+ .|+++|.+++.|.+|+++|+|++||+|
T Consensus 2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C 43 (44)
T 2eof_A 2 SSGSSGTGEKPYECN--ECQKAFNTKSNLMVHQRTHTGESGPSS 43 (44)
T ss_dssp CCSSCCSCCCSEECT--TTCCEESCHHHHHHHHHHTTTSSCSCC
T ss_pred CCccCCCCCCCeECC--CCCcccCCHhHHHHHHHHhCCCCCCCC
Confidence 688999999999995 599999999999999999999999988
No 245
>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.05 E-value=3.4e-11 Score=96.69 Aligned_cols=43 Identities=40% Similarity=0.642 Sum_probs=39.2
Q ss_pred ccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeec
Q psy8969 1154 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCA 1198 (1230)
Q Consensus 1154 ~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~ 1198 (1230)
.|+++|++++||+|+ .|++.|.+++.|++|+++|++++||+|+
T Consensus 2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2em2_A 2 SSGSSGSGEKPFKCK--ECGKAFRQNIHLASHLRIHTGEKPSGPS 44 (46)
T ss_dssp CCCCSCCCCCSEECS--SSCCEESSHHHHHHHHHHHCCCCSSCSS
T ss_pred CCCCCCCCCCCEECC--cCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence 489999999999995 5999999999999999999999999994
No 246
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A
Probab=99.05 E-value=3e-11 Score=96.98 Aligned_cols=43 Identities=35% Similarity=0.582 Sum_probs=39.1
Q ss_pred ccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeec
Q psy8969 1154 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCA 1198 (1230)
Q Consensus 1154 ~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~ 1198 (1230)
+|+++|++++||+|+ .|+++|.+++.|++|+++|++++||+|+
T Consensus 2 ~H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2emj_A 2 SSGSSGTGEKPFECA--ECGKSFSISSQLATHQRIHTGEKPSGPS 44 (46)
T ss_dssp CCCCCCCCCCSEECS--SSSCEESSHHHHHHHHHHHTTSCSSSSC
T ss_pred CCCCCCCCCCCEECC--CCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence 689999999999995 5999999999999999999999999994
No 247
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.05 E-value=3.8e-11 Score=96.22 Aligned_cols=43 Identities=40% Similarity=0.648 Sum_probs=39.3
Q ss_pred ccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeec
Q psy8969 1154 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCA 1198 (1230)
Q Consensus 1154 ~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~ 1198 (1230)
+|+++|++++||+|+ .|+++|.+++.|.+|+++|++++||.|+
T Consensus 2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2ytf_A 2 SSGSSGTGEKPFECS--ECQKAFNTKSNLIVHQRTHTGEKPSGPS 44 (46)
T ss_dssp CCCCSSCCCCSEECS--SSCCEESSHHHHHHHHHTSCSSSSSCCC
T ss_pred CCCCCCCCCCCcCCC--CCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence 589999999999995 5999999999999999999999999995
No 248
>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.05 E-value=4e-11 Score=95.23 Aligned_cols=43 Identities=16% Similarity=0.268 Sum_probs=38.4
Q ss_pred hccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEee
Q psy8969 1153 KVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 1197 (1230)
Q Consensus 1153 k~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C 1197 (1230)
.+|+++|++++||+|+ .|+++|.+++.|.+|+++|++++||.|
T Consensus 1 ~~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C 43 (44)
T 2emb_A 1 GSSGSSGHTRKRYECS--KCQATFNLRKHLIQHQKTHAAKSGPSS 43 (44)
T ss_dssp CCCCSCCCCCSSEECT--TTCCEESCHHHHHHHGGGGCCCCCTTC
T ss_pred CCcccccCCCCCeECC--CCCCccCCHHHHHHHHHHcCCCCCcCC
Confidence 3689999999999995 599999999999999999999999988
No 249
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.05 E-value=3.2e-11 Score=94.68 Aligned_cols=41 Identities=32% Similarity=0.554 Sum_probs=35.5
Q ss_pred cccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEee
Q psy8969 1155 HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 1197 (1230)
Q Consensus 1155 H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C 1197 (1230)
|+++|+|++||+|+ .|+++|.+++.|.+|+++|++++||+|
T Consensus 2 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C 42 (42)
T 2en2_A 2 SSGSSGGEKPYKCE--TCGARFVQVAHLRAHVLIHTGSGPSSG 42 (42)
T ss_dssp CCCCCCSSCSEECT--TTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred CCcccCCCCCEeCC--CcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence 78888888888884 588888888888888888888888887
No 250
>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.05 E-value=4e-11 Score=95.13 Aligned_cols=42 Identities=29% Similarity=0.465 Sum_probs=38.3
Q ss_pred ccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEee
Q psy8969 1154 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 1197 (1230)
Q Consensus 1154 ~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C 1197 (1230)
.|+++|++++||+|+ .|+++|.+++.|.+|+++|++++||+|
T Consensus 2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C 43 (44)
T 2eoj_A 2 SSGSSGTGENPYECC--ECGKVFSRKDQLVSHQKTHSGQSGPSS 43 (44)
T ss_dssp CSCCSSSSCCSCEET--TTTEECSSHHHHHHHHTTSSSSCSCCC
T ss_pred CCccccCCCcCeeCC--CCCCccCCHHHHHHHHHHcCCCCCCCC
Confidence 589999999999995 599999999999999999999999998
No 251
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.05 E-value=4.5e-11 Score=95.85 Aligned_cols=43 Identities=35% Similarity=0.529 Sum_probs=39.5
Q ss_pred ccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeec
Q psy8969 1154 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCA 1198 (1230)
Q Consensus 1154 ~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~ 1198 (1230)
.|+++|++++||+|+ .|+++|.+++.|++|+++|++++||+|+
T Consensus 2 ~H~~~H~~~~~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2emi_A 2 SSGSSGTGERHYECS--ECGKAFIQKSTLSMHQRIHRGEKPSGPS 44 (46)
T ss_dssp CCCCSCSSCCCEECS--SSCCEESSHHHHHHHHGGGCSCCCCSCC
T ss_pred CCCcccCCCCCCCCC--CCCcccCCHHHHHHHHhHhCCCCCCCCC
Confidence 589999999999995 5999999999999999999999999995
No 252
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.05 E-value=3.9e-11 Score=96.34 Aligned_cols=43 Identities=33% Similarity=0.496 Sum_probs=39.1
Q ss_pred ccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeec
Q psy8969 1154 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCA 1198 (1230)
Q Consensus 1154 ~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~ 1198 (1230)
.|+++|++++||+|+ .|+++|.+++.|.+|+++|++++||+|+
T Consensus 2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2eoh_A 2 SSGSSGSGKKPYECK--ECRKTFIQIGHLNQHKRVHTGERSSGPS 44 (46)
T ss_dssp CCCCSCCCSCSCCCS--SSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred CCCCCcCCCCCcCCC--CcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence 489999999999995 5999999999999999999999999995
No 253
>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=99.05 E-value=6.3e-12 Score=116.50 Aligned_cols=60 Identities=13% Similarity=0.210 Sum_probs=48.7
Q ss_pred ccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeecccccCccccchhhHHHHhhhccC
Q psy8969 1154 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTD 1221 (1230)
Q Consensus 1154 ~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~~e~CGKsF~~ks~LkrH~R~HtG 1221 (1230)
.|.++|++++||+|+ .|++.|.+++.|++|+++|++++||+|. .|.....|..|+++|+|
T Consensus 15 ~~~~~H~~~kpy~C~--~C~k~F~~~~~L~~H~~~Ht~ekp~~C~------~~~~~~~~~~~~~~~~~ 74 (88)
T 1x6f_A 15 LGNGPRLQNSTYQCK--HCDSKLQSTAELTSHLNIHNEEFQKRAK------RQERRKQLLSKQKYADG 74 (88)
T ss_dssp CCCCSCCCCSCEECS--SSCCEESSHHHHHHHHHHHHHHHHHHCC------CCSCCCCCCCCCCCCCC
T ss_pred ccccccCCCCCCcCC--CCCCEeCCHHHHHHHHHHhCCCCCcccc------hhhhHHHHHhhhccccc
Confidence 345668899999995 5999999999999999999999999883 34567778888888888
No 254
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.05 E-value=4.2e-11 Score=95.97 Aligned_cols=43 Identities=37% Similarity=0.617 Sum_probs=39.5
Q ss_pred ccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeec
Q psy8969 1154 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCA 1198 (1230)
Q Consensus 1154 ~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~ 1198 (1230)
+|+++|++++||+|+ .|+++|.+++.|++|+++|++++||.|+
T Consensus 2 ~H~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2yrj_A 2 SSGSSGTGEKPYRCG--ECGKAFAQKANLTQHQRIHTGEKPSGPS 44 (46)
T ss_dssp CCCCCCCCCCCEECS--SSCCEESSHHHHHHHHTTTSSCCSSCSC
T ss_pred CCccCCCCCCCeECC--CCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence 689999999999995 5999999999999999999999999994
No 255
>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.05 E-value=3e-11 Score=96.96 Aligned_cols=43 Identities=30% Similarity=0.457 Sum_probs=39.1
Q ss_pred ccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeec
Q psy8969 1154 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCA 1198 (1230)
Q Consensus 1154 ~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~ 1198 (1230)
+|+++|++++||+|+ .|+++|.+++.|.+|+++|++++||.|+
T Consensus 2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~ 44 (46)
T 2eoz_A 2 SSGSSGTGEKPYSCN--VCGKAFVLSAHLNQHLRVHTQETLSGPS 44 (46)
T ss_dssp CSCCCCSSCCSEEET--TTTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred CccccCCCCCCeECc--ccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence 689999999999995 5999999999999999999999999995
No 256
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.04 E-value=4.9e-11 Score=95.62 Aligned_cols=43 Identities=28% Similarity=0.500 Sum_probs=39.0
Q ss_pred ccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeec
Q psy8969 1154 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCA 1198 (1230)
Q Consensus 1154 ~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~ 1198 (1230)
.|+++|++++||+|+ .|++.|.+++.|++|+++|++++||+|+
T Consensus 2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~ 44 (46)
T 2emg_A 2 SSGSSGTGENPFICS--ECGKVFTHKTNLIIHQKIHTGERPSGPS 44 (46)
T ss_dssp CCCCCCCSCCSCBCT--TTCCBCSSHHHHHHHHTTTSCCCCSCSC
T ss_pred CCCCCCCCCCCEECC--ccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence 589999999999995 5999999999999999999999999994
No 257
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.04 E-value=3e-11 Score=96.96 Aligned_cols=43 Identities=33% Similarity=0.555 Sum_probs=39.4
Q ss_pred ccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeec
Q psy8969 1154 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCA 1198 (1230)
Q Consensus 1154 ~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~ 1198 (1230)
+|+++|++++||+|+ .|+++|.+++.|++|+++|++++||+|+
T Consensus 2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2yto_A 2 SSGSSGTGEKPYKCS--DCGKAFTRKSGLHIHQQSHTGERHSGPS 44 (46)
T ss_dssp CCCCCCCSCCCEECS--SSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred CcccccCCCCCEECc--ccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence 689999999999995 5999999999999999999999999995
No 258
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.04 E-value=5e-11 Score=95.75 Aligned_cols=43 Identities=33% Similarity=0.556 Sum_probs=38.2
Q ss_pred ccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeec
Q psy8969 1154 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCA 1198 (1230)
Q Consensus 1154 ~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~ 1198 (1230)
.|+++|++++||+|+ .|+|+|.+++.|++|+++|++++||.|+
T Consensus 2 ~h~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2eon_A 2 SSGSSGTGEKPYKCQ--VCGKAFRVSSHLVQHHSVHSGERPSGPS 44 (46)
T ss_dssp CCSSSCSSCCSCBCS--SSCCBCSSHHHHHHHTTTTTSCCSCTTS
T ss_pred CCCCCCCCCcccCCC--CCCcccCcHHHHHHHHHhcCCCCCCCCC
Confidence 388999999999995 5999999999999999999999999984
No 259
>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.04 E-value=3.3e-11 Score=95.68 Aligned_cols=43 Identities=21% Similarity=0.346 Sum_probs=38.8
Q ss_pred hccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEee
Q psy8969 1153 KVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 1197 (1230)
Q Consensus 1153 k~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C 1197 (1230)
++|+++|++++||+|+ .|+++|.+++.|.+|+++|++++||.|
T Consensus 1 ~~H~~~H~~~~~~~C~--~C~k~F~~~~~L~~H~~~H~~~~~~~C 43 (44)
T 2eox_A 1 GSSGSSGTDSKSYNCN--ECGKAFTRIFHLTRHQKIHTRKSGPSS 43 (44)
T ss_dssp CCCCCCCCCCCCEEET--TTTEEESSSHHHHTTHHHHCCCCCCSC
T ss_pred CCCCcCCCCCCCeECc--ccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence 3689999999999995 599999999999999999999999988
No 260
>1ny5_A Transcriptional regulator (NTRC family); AAA+ ATPase, sigma54 activator, bacterial transcription, DIM transcription; HET: ADP; 2.40A {Aquifex aeolicus} SCOP: c.23.1.1 c.37.1.20 PDB: 1ny6_A* 3m0e_A* 1zy2_A*
Probab=99.04 E-value=2.5e-09 Score=125.96 Aligned_cols=203 Identities=20% Similarity=0.303 Sum_probs=135.2
Q ss_pred ceEEEeCCCCCCchHHHHHHHHHhC---CCeEEEecCCcch---hHHHhhccc-cccccC---chhHHHHHHhhcCCCCE
Q psy8969 382 KILCFYGPPGVGKTSIAKSIARALN---REYFRFSVGGMSD---VAEIKGHRR-TYVGAM---PGKVIQCMKKTKTENPL 451 (1230)
Q Consensus 382 ~~llL~GPPG~GKTslak~iA~~l~---~~~~~~~~~~~~d---~~~i~g~~~-~~~g~~---~g~i~~~~~~~~~~~pv 451 (1230)
..+++.|++|||||++|++|....+ .||+.++++.+.+ ++++.||.+ .|.|+. +|.+. ...+.+
T Consensus 161 ~~vli~Ge~GtGK~~lAr~ih~~s~r~~~~fv~v~~~~~~~~~~~~elfg~~~g~~tga~~~~~g~~~------~a~~gt 234 (387)
T 1ny5_A 161 CPVLITGESGVGKEVVARLIHKLSDRSKEPFVALNVASIPRDIFEAELFGYEKGAFTGAVSSKEGFFE------LADGGT 234 (387)
T ss_dssp SCEEEECSTTSSHHHHHHHHHHHSTTTTSCEEEEETTTSCHHHHHHHHHCBCTTSSTTCCSCBCCHHH------HTTTSE
T ss_pred CCeEEecCCCcCHHHHHHHHHHhcCCCCCCeEEEecCCCCHHHHHHHhcCCCCCCCCCcccccCCcee------eCCCcE
Confidence 4478999999999999999999875 6899999988775 466778765 344543 45432 234679
Q ss_pred EEEecccccCCCCCCChhhHHHhhcChhhhhhhhhhccCccccCCceEEEEecCCC-------CCCCHhhhccccee--e
Q psy8969 452 VLIDEVDKIGKGYSGDPASALLEMLDPEQNANFLDHYLDVPVDLSRVLFICTANVI-------DTIPEPLRDRMEMI--D 522 (1230)
Q Consensus 452 illDEIDk~~~~~~~~~~~all~~ld~~q~~~f~d~~~~~~~d~s~v~~I~TaN~~-------~~I~~~L~~R~~~i--~ 522 (1230)
+|||||+.+.. +....||.+|+..+ |..- -+......+|.+|+|||.. ..+.+.|..|+.++ .
T Consensus 235 lfldei~~l~~----~~q~~Ll~~l~~~~---~~~~-g~~~~~~~~~rii~at~~~l~~~~~~g~fr~dl~~rl~~~~i~ 306 (387)
T 1ny5_A 235 LFLDEIGELSL----EAQAKLLRVIESGK---FYRL-GGRKEIEVNVRILAATNRNIKELVKEGKFREDLYYRLGVIEIE 306 (387)
T ss_dssp EEEESGGGCCH----HHHHHHHHHHHHSE---ECCB-TCCSBEECCCEEEEEESSCHHHHHHTTSSCHHHHHHHTTEEEE
T ss_pred EEEcChhhCCH----HHHHHHHHHHhcCc---EEeC-CCCceeeccEEEEEeCCCCHHHHHHcCCccHHHHHhhcCCeec
Confidence 99999999843 45677888876422 2111 1111112467899999952 45678888898764 4
Q ss_pred cCCCCH--HHHHHHHHHhhcchhHHhcCCCCCCcccCHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCce
Q psy8969 523 VSGYVA--EEKVAIAAQYLIPQAMKESGLSPEQITLEPSAIQVLIKNYCRESGVRNLQKHIEKVTRKVALTIVKKESDKV 600 (1230)
Q Consensus 523 ~~~~~~--~e~~~i~~~~l~~~~~~~~gl~~~~i~~~~~~~~~li~~~~~e~gvR~l~~~i~~i~r~~~~~~~~~~~~~~ 600 (1230)
++++-. +|...++..+ +.+...+.|.. ...++++++..+. .|..-++||.|++.|+..+... . . -
T Consensus 307 lPpLreR~~Di~~l~~~~-l~~~~~~~~~~--~~~~~~~a~~~l~-~~~wpGNvreL~~~i~~~~~~~-------~-~-~ 373 (387)
T 1ny5_A 307 IPPLRERKEDIIPLANHF-LKKFSRKYAKE--VEGFTKSAQELLL-SYPWYGNVRELKNVIERAVLFS-------E-G-K 373 (387)
T ss_dssp CCCGGGCHHHHHHHHHHH-HHHHHHHTTCC--CCEECHHHHHHHH-HSCCTTHHHHHHHHHHHHHHHC-------C-S-S
T ss_pred CCcchhccccHHHHHHHH-HHHHHHHcCCC--CCCCCHHHHHHHH-hCCCCcHHHHHHHHHHHHHHhC-------C-C-C
Confidence 555443 5655555544 45555555532 3468999988865 6777899999999998865321 1 1 2
Q ss_pred Eechhhhhhhc
Q psy8969 601 TVTNDNLSDFV 611 (1230)
Q Consensus 601 ~i~~~~~~~~~ 611 (1230)
.|+.+++...+
T Consensus 374 ~i~~~~l~~~~ 384 (387)
T 1ny5_A 374 FIDRGELSCLV 384 (387)
T ss_dssp EECHHHHHHHC
T ss_pred cCcHHHCcHhh
Confidence 57777775443
No 261
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.04 E-value=4.5e-11 Score=95.93 Aligned_cols=43 Identities=35% Similarity=0.539 Sum_probs=39.2
Q ss_pred ccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeec
Q psy8969 1154 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCA 1198 (1230)
Q Consensus 1154 ~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~ 1198 (1230)
+|+++|++++||+|+ .|+++|.+++.|.+|+++|++++||.|+
T Consensus 2 ~h~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2en9_A 2 SSGSSGAGKKLFKCN--ECKKTFTQSSSLTVHQRIHTGEKPSGPS 44 (46)
T ss_dssp CCCSSCCSSCCCBCT--TTCCBCSSHHHHHHHHHHHTSSCCCSCC
T ss_pred CCCCCCCCCCCEECC--ccCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence 589999999999995 5999999999999999999999999994
No 262
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.04 E-value=6.7e-11 Score=94.92 Aligned_cols=43 Identities=40% Similarity=0.644 Sum_probs=38.7
Q ss_pred ccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeec
Q psy8969 1154 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCA 1198 (1230)
Q Consensus 1154 ~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~ 1198 (1230)
.|+++|++++||+|+ .|++.|.+++.|++|+++|++++||+|+
T Consensus 2 ~h~~~h~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2enh_A 2 SSGSSGTGEKPYECD--VCRKAFSHHASLTQHQRVHSGEKPSGPS 44 (46)
T ss_dssp CCCCCCCCSSSCBCT--TTCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred CCCCCcCCCCCcCCC--CcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence 388999999999995 5999999999999999999999999995
No 263
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Probab=99.03 E-value=5.2e-11 Score=93.35 Aligned_cols=41 Identities=27% Similarity=0.433 Sum_probs=35.8
Q ss_pred cccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEee
Q psy8969 1155 HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 1197 (1230)
Q Consensus 1155 H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C 1197 (1230)
|+++|++++||+|+ .|+++|.+++.|++|+++|++++||+|
T Consensus 2 H~~~H~~~~~~~C~--~C~k~f~~~~~l~~H~~~H~~~k~~~C 42 (42)
T 2epc_A 2 SSGSSGGETPYLCG--QCGKSFTQRGSLAVHQRSCSQSGPSSG 42 (42)
T ss_dssp CCSCCCSSCCEECS--SSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred CCccCCCCCCeECC--CCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence 78888999999995 599999999999999999999998887
No 264
>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.03 E-value=5.2e-11 Score=95.41 Aligned_cols=43 Identities=37% Similarity=0.586 Sum_probs=40.2
Q ss_pred ccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeec
Q psy8969 1154 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCA 1198 (1230)
Q Consensus 1154 ~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~ 1198 (1230)
+|+++|++++||+|+ .|+++|.+++.|.+|+++|++++||+|+
T Consensus 2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2eq3_A 2 SSGSSGTGEKPYECN--QCGKAFSVRSSLTTHQAIHTGKKPSGPS 44 (46)
T ss_dssp CCCCSSCCCCSSEET--TTTEECSSHHHHHHHHTTSCCCCCCCSC
T ss_pred CcccCCCCCCCeECC--CCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence 699999999999995 5999999999999999999999999995
No 265
>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.02 E-value=4.1e-11 Score=96.00 Aligned_cols=43 Identities=37% Similarity=0.590 Sum_probs=39.0
Q ss_pred ccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeec
Q psy8969 1154 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCA 1198 (1230)
Q Consensus 1154 ~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~ 1198 (1230)
.|+++|++++||+|+ .|++.|.+++.|++|+++|++++||.|+
T Consensus 2 ~H~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~kp~~C~ 44 (46)
T 2eor_A 2 SSGSSGTGEKPYNCE--ECGKAFIHDSQLQEHQRIHTGEKPSGPS 44 (46)
T ss_dssp CSSSSSSCCCSEECT--TTCCEESSHHHHHHHHHHHHSCCCSSST
T ss_pred CCCcCcCCCcCccCC--CCCCCcCCHHHHHHHHHhcCCCCCCCCC
Confidence 589999999999995 5999999999999999999999999995
No 266
>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.02 E-value=4.1e-11 Score=96.20 Aligned_cols=43 Identities=33% Similarity=0.509 Sum_probs=39.7
Q ss_pred ccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeec
Q psy8969 1154 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCA 1198 (1230)
Q Consensus 1154 ~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~ 1198 (1230)
+|+++|++++||+|+ .|+++|.+++.|.+|+++|++++||.|+
T Consensus 2 ~h~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2emz_A 2 SSGSSGSGERPFKCN--ECGKGFGRRSHLAGHLRLHSREKSSGPS 44 (46)
T ss_dssp CCCSCSSCCCSCCCS--SSCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred CCCcCCCCCCCeECC--CCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence 689999999999995 5999999999999999999999999994
No 267
>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.02 E-value=4.3e-11 Score=107.37 Aligned_cols=69 Identities=20% Similarity=0.286 Sum_probs=62.5
Q ss_pred chhhhccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeecccccCccccchhhHHHHhhhccCccc
Q psy8969 1149 AHHMKVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTDEFQ 1224 (1230)
Q Consensus 1149 ~s~Lk~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~~e~CGKsF~~ks~LkrH~R~HtGE~~ 1224 (1230)
++.|..|+++|+++|||.|+ +|++.|. .+.|..|+ .|.+++||.|+ .|++.|. ...|..|+++|+++.+
T Consensus 2 ~~~L~~H~~~~c~~r~~~C~--~C~~~~~-~~~L~~H~-~~c~~~~~~C~--~C~~~~~-~~~l~~H~~~c~~~~~ 70 (75)
T 2d9k_A 2 SSGSSGHEETECPLRLAVCQ--HCDLELS-ILKLKEHE-DYCGARTELCG--NCGRNVL-VKDLKTHPEVCGREGS 70 (75)
T ss_dssp CCCCSCCCCCCCCCCCEECS--SSCCEEC-HHHHHHHH-HHHHHCEEECS--SSCCEEE-TTGGGTHHHHBTTBSS
T ss_pred chHHHhhCcccCCCcccCCc--ccChHhh-HHHHHHHH-hHcCCCceEcc--cCCCcCc-HHHHHHHHHHccCCcC
Confidence 46799999999999999995 6999995 99999999 99999999995 6999988 5999999999998743
No 268
>3dzd_A Transcriptional regulator (NTRC family); sigma43 activator, AAA+ ATPase, response regulator, transcriptional activator, ATP-binding; HET: ADP; 2.40A {Aquifex aeolicus} PDB: 1zit_A 2jrl_A
Probab=99.02 E-value=2e-09 Score=125.84 Aligned_cols=209 Identities=20% Similarity=0.298 Sum_probs=137.6
Q ss_pred cccChHHHHHHHHHHHHHhhhcCCCCCceEEEeCCCCCCchHHHHHHHHHhCCC--eEEEecCCcch---hHHHhhcccc
Q psy8969 355 DHYGMEDVKKRILEFIAVSQLKGTTQGKILCFYGPPGVGKTSIAKSIARALNRE--YFRFSVGGMSD---VAEIKGHRRT 429 (1230)
Q Consensus 355 d~~G~~~vK~~i~e~l~~~~~~~~~~~~~llL~GPPG~GKTslak~iA~~l~~~--~~~~~~~~~~d---~~~i~g~~~~ 429 (1230)
+..|......++.+.+.... .....+++.|++||||+.+|++|....++. |+.++++.+.+ ++++.||.+.
T Consensus 130 ~~ig~s~~~~~~~~~~~~~a----~~~~~vli~GesGtGKe~lAr~ih~~s~r~~~fv~vnc~~~~~~~~~~~lfg~~~g 205 (368)
T 3dzd_A 130 EFVGEHPKILEIKRLIPKIA----KSKAPVLITGESGTGKEIVARLIHRYSGRKGAFVDLNCASIPQELAESELFGHEKG 205 (368)
T ss_dssp CCCCCSHHHHHHHHHHHHHH----TSCSCEEEECCTTSSHHHHHHHHHHHHCCCSCEEEEESSSSCTTTHHHHHHEECSC
T ss_pred cccccchHHHHHHhhhhhhh----ccchhheEEeCCCchHHHHHHHHHHhccccCCcEEEEcccCChHHHHHHhcCcccc
Confidence 45666666665655543221 122348899999999999999999998765 99999987765 4667777653
Q ss_pred -ccccC---chhHHHHHHhhcCCCCEEEEecccccCCCCCCChhhHHHhhcChhhhhhhhhhccCccccCCceEEEEecC
Q psy8969 430 -YVGAM---PGKVIQCMKKTKTENPLVLIDEVDKIGKGYSGDPASALLEMLDPEQNANFLDHYLDVPVDLSRVLFICTAN 505 (1230)
Q Consensus 430 -~~g~~---~g~i~~~~~~~~~~~pvillDEIDk~~~~~~~~~~~all~~ld~~q~~~f~d~~~~~~~d~s~v~~I~TaN 505 (1230)
+.|+. +|.+. ...+..||||||+.+.. +....||.+|+..+ |..---..++ ..++-+|+|||
T Consensus 206 ~~tga~~~~~g~~~------~a~~gtlfldei~~l~~----~~Q~~Ll~~l~~~~---~~~~g~~~~~-~~~~rii~at~ 271 (368)
T 3dzd_A 206 AFTGALTRKKGKLE------LADQGTLFLDEVGELDQ----RVQAKLLRVLETGS---FTRLGGNQKI-EVDIRVISATN 271 (368)
T ss_dssp SSSSCCCCEECHHH------HTTTSEEEEETGGGSCH----HHHHHHHHHHHHSE---ECCBTCCCBE-ECCCEEEEEES
T ss_pred ccCCcccccCChHh------hcCCCeEEecChhhCCH----HHHHHHHHHHHhCC---cccCCCCcce-eeeeEEEEecC
Confidence 33432 34442 23457899999999843 34667787775422 2111001111 13567888888
Q ss_pred CC-------CCCCHhhhccccee--ecCCCCH--HHHHHHHHHhhcchhHHhcCCCCCCcccCHHHHHHHHHHhhhhhhH
Q psy8969 506 VI-------DTIPEPLRDRMEMI--DVSGYVA--EEKVAIAAQYLIPQAMKESGLSPEQITLEPSAIQVLIKNYCRESGV 574 (1230)
Q Consensus 506 ~~-------~~I~~~L~~R~~~i--~~~~~~~--~e~~~i~~~~l~~~~~~~~gl~~~~i~~~~~~~~~li~~~~~e~gv 574 (1230)
.. ....+.|+.|+.++ .++++-. +|...++..++ .+...+.+ ...+.++++++..|. .|..-++|
T Consensus 272 ~~l~~~v~~g~fr~dL~~rl~~~~i~lPpLreR~~Di~~l~~~~l-~~~~~~~~--~~~~~~~~~a~~~L~-~~~wpGNv 347 (368)
T 3dzd_A 272 KNLEEEIKKGNFREDLYYRLSVFQIYLPPLRERGKDVILLAEYFL-KKFAKEYK--KNCFELSEETKEYLM-KQEWKGNV 347 (368)
T ss_dssp SCHHHHHHTTSSCHHHHHHHTSEEEECCCGGGSTTHHHHHHHHHH-HHHHHHTT--CCCCCBCHHHHHHHH-TCCCTTHH
T ss_pred CCHHHHHHcCCccHHHHHHhCCeEEeCCChhhchhhHHHHHHHHH-HHHHHHcC--CCCCCcCHHHHHHHH-hCCCCcHH
Confidence 43 35567899999875 4666655 56666665554 44444444 335679999988876 66668899
Q ss_pred HHHHHHHHHHH
Q psy8969 575 RNLQKHIEKVT 585 (1230)
Q Consensus 575 R~l~~~i~~i~ 585 (1230)
|.|++.|+.++
T Consensus 348 reL~n~i~~~~ 358 (368)
T 3dzd_A 348 RELKNLIERAV 358 (368)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999998865
No 269
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.01 E-value=8.1e-11 Score=93.59 Aligned_cols=42 Identities=33% Similarity=0.419 Sum_probs=36.3
Q ss_pred ccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEee
Q psy8969 1154 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 1197 (1230)
Q Consensus 1154 ~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C 1197 (1230)
.|+++|++++||+|+ .|++.|.+++.|.+|+++|++++||.|
T Consensus 2 ~H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~~~~ 43 (44)
T 2epv_A 2 SSGSSGSGEKPYECN--ECGKAFIWKSLLIVHERTHAGVSGPSS 43 (44)
T ss_dssp CCCCCCCCCCSEECS--SSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred CCCcccCCCcCeECC--CCCcccCchHHHHHHHhHhcCCCCCCC
Confidence 588888899999995 599999998999999888998888877
No 270
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=99.01 E-value=4e-11 Score=96.17 Aligned_cols=43 Identities=26% Similarity=0.429 Sum_probs=39.5
Q ss_pred ccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeec
Q psy8969 1154 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCA 1198 (1230)
Q Consensus 1154 ~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~ 1198 (1230)
+|+++|++++||+|+ .|+++|.+++.|.+|+++|++++||+|+
T Consensus 2 ~H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~~~~~C~ 44 (46)
T 2en3_A 2 SSGSSGTGEKPFQCK--ECGMNFSWSCSLFKHLRSHERTDPSGPS 44 (46)
T ss_dssp CCCCCSCCCCSEECS--SSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred ccccccCCCCCeeCc--ccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence 699999999999995 5999999999999999999999999994
No 271
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.00 E-value=8.8e-11 Score=94.21 Aligned_cols=43 Identities=28% Similarity=0.298 Sum_probs=39.1
Q ss_pred ccccccCCCCcccCCcccccccccCchhhhhhcccccC-CCCEeec
Q psy8969 1154 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTG-EKPYRCA 1198 (1230)
Q Consensus 1154 ~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTG-EKPy~C~ 1198 (1230)
.|+++|++++||+|+ .|+++|.+++.|++|+++|++ ++||+|+
T Consensus 2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~~C~ 45 (46)
T 2eoy_A 2 SSGSSGQKEKCFKCN--KCEKTFSCSKYLTQHERIHTRGVKSGPSS 45 (46)
T ss_dssp CCCCCCCCSCCEECS--SSCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred CCccccCCCCCEECc--CCCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence 589999999999995 599999999999999999999 9999994
No 272
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=98.99 E-value=1.1e-10 Score=97.33 Aligned_cols=47 Identities=32% Similarity=0.579 Sum_probs=31.4
Q ss_pred ccCCCCcccCCcccccccccCchhhhhhcc-cccCCCCEeecccccCccccc
Q psy8969 1158 IHSGIRPYKCPVEYCEKAFSTQYSRKAHIR-THTGEKPYRCAHEFCSKSFKT 1208 (1230)
Q Consensus 1158 ~HTGEKPykCpve~CgKsF~~ks~Lk~H~R-tHTGEKPy~C~~e~CGKsF~~ 1208 (1230)
.|++++||+|+ .|++.|.++..|++|++ +|++++||+| ++|++.|.+
T Consensus 6 ~~~~~k~~~C~--~C~k~f~~~~~L~~H~~~~H~~~k~~~C--~~C~k~F~~ 53 (54)
T 2eps_A 6 SGSVGKPYICQ--SCGKGFSRPDHLNGHIKQVHTSERPHKC--QVWVSGPSS 53 (54)
T ss_dssp CCCSSCCEECS--SSCCEESSHHHHHHHHHHTSCCCCCCCS--SSSCCSSCC
T ss_pred CCCCCCCeECC--CCCcccCCHHHHHHHHHHhcCCCCCccC--CCCCCCCCC
Confidence 46666777774 47777777777777765 6777777777 357777764
No 273
>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*
Probab=98.99 E-value=1e-10 Score=97.48 Aligned_cols=51 Identities=16% Similarity=0.240 Sum_probs=48.2
Q ss_pred cccccCchhhhhhcccccCCCCEeecccccCccccchhhHHHHhhhccCcccc
Q psy8969 1173 EKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTDEFQM 1225 (1230)
Q Consensus 1173 gKsF~~ks~Lk~H~RtHTGEKPy~C~~e~CGKsF~~ks~LkrH~R~HtGE~~~ 1225 (1230)
+|.|.+...|..|+++|+|++||.|. +||+.|.++++|.+|+++|+||+.+
T Consensus 3 ~k~~~~~~~l~~h~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~kp~ 53 (54)
T 1yui_A 3 AKRAKHPPGTEKPRSRSQSEQPATCP--ICYAVIRQSRNLRRHLELRHFAKPG 53 (54)
T ss_dssp CCCCSCSSCCCCCHHHHTSSCCEECT--TTCCEESSHHHHHHHHHHHTTTSCC
T ss_pred ccccCCCcchhhHHHhcCCCCCccCC--CCCcccCCHHHHHHHHHHhccCCCC
Confidence 58899999999999999999999994 7999999999999999999999875
No 274
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.98 E-value=1.1e-10 Score=93.46 Aligned_cols=44 Identities=39% Similarity=0.567 Sum_probs=37.4
Q ss_pred cccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeeccccc
Q psy8969 1155 HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFC 1202 (1230)
Q Consensus 1155 H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~~e~C 1202 (1230)
++++|++++||+|+ .|++.|.+++.|++|+++|++++||+|. +|
T Consensus 3 ~~~~h~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~--~C 46 (46)
T 2ep0_A 3 SGSSGTGEKPYKCD--VCHKSFRYGSSLTVHQRIHTGEKPSGPS--SG 46 (46)
T ss_dssp CCCSSTTCCSEECS--SSCCEESSHHHHHHHHTTTSSSCCCSCC--CC
T ss_pred CCCCCCCCCCeeCc--ccCcccCChHHHHHHHHHhCCCCCCCCC--CC
Confidence 57888999999995 5999999999999999999999999884 56
No 275
>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.97 E-value=1.2e-10 Score=92.47 Aligned_cols=42 Identities=19% Similarity=0.193 Sum_probs=37.2
Q ss_pred ccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEee
Q psy8969 1154 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 1197 (1230)
Q Consensus 1154 ~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C 1197 (1230)
.|+++|++++||.|+ .|+++|.+++.|.+|+++|++++||+|
T Consensus 2 ~h~~~h~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C 43 (44)
T 2eou_A 2 SSGSSGAAKTTSECQ--ECGKIFRHSSLLIEHQALHAGESGPSS 43 (44)
T ss_dssp CCSCSCSSSCCCCCT--TTCCCCSSHHHHHHHHHHHTTSCCCCC
T ss_pred CCCCCCCCCcCeECC--CCCcccCCHHHHHHHHHHHCCCCCCCC
Confidence 388899999999995 599999999999999999999999988
No 276
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=98.97 E-value=1.8e-10 Score=95.99 Aligned_cols=49 Identities=27% Similarity=0.568 Sum_probs=44.5
Q ss_pred cccCCCCCccCCCCCCCCCCchhhhcccc-ccCCCCcccCCcccccccccCc
Q psy8969 1129 KKSTSSENNVCPECKKTFSSAHHMKVHLR-IHSGIRPYKCPVEYCEKAFSTQ 1179 (1230)
Q Consensus 1129 ~~~t~~kpy~C~~CgK~F~s~s~Lk~H~R-~HTGEKPykCpve~CgKsF~~k 1179 (1230)
..++++++|.|++|++.|.+.++|.+|++ +|++++||+|+ .|+++|.++
T Consensus 5 ~~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~--~C~k~F~~~ 54 (54)
T 2eps_A 5 SSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ--VWVSGPSSG 54 (54)
T ss_dssp CCCCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSS--SSCCSSCCC
T ss_pred CCCCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCC--CCCCCCCCC
Confidence 35678899999999999999999999997 99999999995 599999864
No 277
>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.95 E-value=6.2e-10 Score=103.35 Aligned_cols=60 Identities=22% Similarity=0.329 Sum_probs=31.9
Q ss_pred eecCCCccCccccChhhHHHHHhh-ccCCCC--------ccccccccccccCCchhHhhhhccccCCCCccCC
Q psy8969 822 YVCGEAGCDKSFASATNYKNHMRI-HSGEKP--------YVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICD 885 (1230)
Q Consensus 822 y~C~~~~Cgk~F~~~s~L~~H~r~-Htgekp--------y~C~~~~C~k~F~~~~~L~~H~~~H~~ekpy~C~ 885 (1230)
|.|.. |++.|.+...|..|+++ |++++| |.|.. |++.|.+...|..|+++|++++||.|+
T Consensus 26 ~~C~~--C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~ 94 (95)
T 2ej4_A 26 RPKKS--CDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPR--EGKSFKAKYKLVNHIRVHTGEKSGPSS 94 (95)
T ss_dssp SSCCC--CCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSS--TTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred Ccccc--cccccCCHHHHHHHHHHhccCCCCCCccceeccCCCC--CCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence 34544 55555555555555554 444444 55543 555555555555555555555555554
No 278
>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.95 E-value=1.8e-10 Score=93.06 Aligned_cols=47 Identities=26% Similarity=0.352 Sum_probs=39.7
Q ss_pred ccccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeeccccc
Q psy8969 1154 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFC 1202 (1230)
Q Consensus 1154 ~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~~e~C 1202 (1230)
.|.++|++++||+|++..|+++|.+++.|.+|+++|++++||+|. +|
T Consensus 2 ~~~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~--~C 48 (48)
T 2ent_A 2 SSGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS--SG 48 (48)
T ss_dssp CCCCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSC--CC
T ss_pred CCCCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCC--CC
Confidence 377899999999994115999999999999999999999999994 56
No 279
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.93 E-value=1.6e-10 Score=92.64 Aligned_cols=44 Identities=36% Similarity=0.531 Sum_probs=35.2
Q ss_pred cccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeeccccc
Q psy8969 1155 HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFC 1202 (1230)
Q Consensus 1155 H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~~e~C 1202 (1230)
.+++|++++||+|+ .|+++|.+++.|++|+++|++++||.|+ +|
T Consensus 3 ~~~~h~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~--~C 46 (46)
T 2ytt_A 3 SGSSGEGEKPYQCS--ECGKSFSGSYRLTQHWITHTREKPSGPS--SG 46 (46)
T ss_dssp CSSSCSCCCTTCCS--SSCCCCSSHHHHHHHHTHHHHCCCCSCC--CC
T ss_pred CCCCCCCCCCeeCC--CCCcccCCHHHHHHHHHHcCCCCCCCCC--CC
Confidence 46788888888884 5888888888888888888888888884 56
No 280
>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.93 E-value=2.2e-10 Score=91.38 Aligned_cols=42 Identities=31% Similarity=0.544 Sum_probs=35.8
Q ss_pred cccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeec
Q psy8969 1155 HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCA 1198 (1230)
Q Consensus 1155 H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~ 1198 (1230)
|.++|++++||+|+ .|+|.|.+++.|.+|+++|++++||.|+
T Consensus 3 ~~~~h~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~~~C~ 44 (45)
T 2epu_A 3 SGSSGTGQKPFECT--HCGKSFRAKGNLVTHQRIHTGEKSGPSS 44 (45)
T ss_dssp CCCCCCSCCSEEET--TTTEEESSHHHHHHHHTTTSSCCCCCSC
T ss_pred CCCCCCCCcCccCC--CCCCccCChHHHHHHHHHhCCCCCCCCC
Confidence 67788888999985 5999999989999998889988888884
No 281
>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.91 E-value=2.6e-10 Score=91.47 Aligned_cols=42 Identities=33% Similarity=0.402 Sum_probs=34.0
Q ss_pred cccccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeec
Q psy8969 1155 HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCA 1198 (1230)
Q Consensus 1155 H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~ 1198 (1230)
++++|++++||+|+ .|++.|.+++.|++|+++|++++||+|.
T Consensus 3 ~~~~h~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2eom_A 3 SGSSGHGERGHRCS--DCGKFFLQASNFIQHRRIHTGEKPSGPS 44 (46)
T ss_dssp CCCCCCCCSSCCCS--SSCCCCSSHHHHHHHHHHHSSCCCSSCC
T ss_pred CCCCCCCCCCcCCC--CCCCeeCChHHHHHHHHHhCCCCCCCCC
Confidence 56788888888884 5888888888888888888888888884
No 282
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.90 E-value=3.9e-10 Score=87.94 Aligned_cols=39 Identities=38% Similarity=0.563 Sum_probs=32.0
Q ss_pred cccCCCCcccCCcccccccccCchhhhhhcccccCCCCEee
Q psy8969 1157 RIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 1197 (1230)
Q Consensus 1157 R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C 1197 (1230)
++|++++||+|+ .|+++|.+++.|++|+++|++++||+|
T Consensus 3 ~~h~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C 41 (41)
T 2ept_A 3 SGSSGQRVYECQ--ECGKSFRQKGSLTLHERIHTGSGPSSG 41 (41)
T ss_dssp SSCCCCCCEECS--SSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred CccCCCCCeECC--CCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence 578888888884 588888888888888888888888877
No 283
>1w5s_A Origin recognition complex subunit 2 ORC2; replication, CDC6, DNA replication initiation, DNA BIND protein, AAA+ ATPase; HET: ADP; 2.4A {Aeropyrum pernix} SCOP: a.4.5.11 c.37.1.20 PDB: 1w5t_A*
Probab=98.89 E-value=6.9e-09 Score=122.10 Aligned_cols=211 Identities=15% Similarity=0.197 Sum_probs=119.7
Q ss_pred ccccChHHHHHHHHHHH-HHhhhcC-CCCCceEEE--eCCCCCCchHHHHHHHHHh---------CCCeEEEecCCcchh
Q psy8969 354 DDHYGMEDVKKRILEFI-AVSQLKG-TTQGKILCF--YGPPGVGKTSIAKSIARAL---------NREYFRFSVGGMSDV 420 (1230)
Q Consensus 354 ~d~~G~~~vK~~i~e~l-~~~~~~~-~~~~~~llL--~GPPG~GKTslak~iA~~l---------~~~~~~~~~~~~~d~ 420 (1230)
++.+|-++..+.|.+++ ... ..+ ...+..+++ +||||+|||+|++.+++.+ +.+++.+++....+.
T Consensus 22 ~~l~gR~~el~~l~~~l~~~~-~~~~~~~~~~~li~i~G~~G~GKT~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (412)
T 1w5s_A 22 PELRVRRGEAEALARIYLNRL-LSGAGLSDVNMIYGSIGRVGIGKTTLAKFTVKRVSEAAAKEGLTVKQAYVNAFNAPNL 100 (412)
T ss_dssp SSCSSSCHHHHHHHHHHHHHH-HTSSCBCCEEEEEECTTCCSSSHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCSH
T ss_pred CCCCChHHHHHHHHHHHhHHH-hcCCCCCCCEEEEeCcCcCCCCHHHHHHHHHHHHHHHHhccCCceeEEEEECCCCCCH
Confidence 67899999999888887 432 222 124567888 9999999999999999987 445667775433332
Q ss_pred HHHh-------hccccccccCchhHHHHHHh---hcCCCCEEEEecccccCCCCCCChhhHHHhhcChhhhhhhhhhccC
Q psy8969 421 AEIK-------GHRRTYVGAMPGKVIQCMKK---TKTENPLVLIDEVDKIGKGYSGDPASALLEMLDPEQNANFLDHYLD 490 (1230)
Q Consensus 421 ~~i~-------g~~~~~~g~~~g~i~~~~~~---~~~~~pvillDEIDk~~~~~~~~~~~all~~ld~~q~~~f~d~~~~ 490 (1230)
..+. |......|.....+...+.. ......||+|||+|.+.....++ ...+..++.. +. +
T Consensus 101 ~~~~~~l~~~l~~~~~~~~~~~~~~~~~l~~~l~~~~~~~llvlDe~~~l~~~~~~~-~~~l~~l~~~------~~---~ 170 (412)
T 1w5s_A 101 YTILSLIVRQTGYPIQVRGAPALDILKALVDNLYVENHYLLVILDEFQSMLSSPRIA-AEDLYTLLRV------HE---E 170 (412)
T ss_dssp HHHHHHHHHHHTCCCCCTTCCHHHHHHHHHHHHHHHTCEEEEEEESTHHHHSCTTSC-HHHHHHHHTH------HH---H
T ss_pred HHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHhcCCeEEEEEeCHHHHhhccCcc-hHHHHHHHHH------HH---h
Confidence 2211 11000011112222222221 11223478899999985421111 1222222221 11 1
Q ss_pred ccccC--CceEEEEecCCCC---CCC---Hhhhcccc-eeecCCCCHHHHHHHHHHhhcchhHHhcCCCCCCcccCHHHH
Q psy8969 491 VPVDL--SRVLFICTANVID---TIP---EPLRDRME-MIDVSGYVAEEKVAIAAQYLIPQAMKESGLSPEQITLEPSAI 561 (1230)
Q Consensus 491 ~~~d~--s~v~~I~TaN~~~---~I~---~~L~~R~~-~i~~~~~~~~e~~~i~~~~l~~~~~~~~gl~~~~i~~~~~~~ 561 (1230)
.+.+- +++.+|+|+|..+ .++ +.+.+|+. .+.+.+|+.+|...++...+- ..+. ...++++++
T Consensus 171 ~~~~~~~~~v~lI~~~~~~~~~~~l~~~~~~~~~~~~~~i~l~~l~~~e~~~ll~~~~~-----~~~~---~~~~~~~~~ 242 (412)
T 1w5s_A 171 IPSRDGVNRIGFLLVASDVRALSYMREKIPQVESQIGFKLHLPAYKSRELYTILEQRAE-----LGLR---DTVWEPRHL 242 (412)
T ss_dssp SCCTTSCCBEEEEEEEEETHHHHHHHHHCHHHHTTCSEEEECCCCCHHHHHHHHHHHHH-----HHBC---TTSCCHHHH
T ss_pred cccCCCCceEEEEEEeccccHHHHHhhhcchhhhhcCCeeeeCCCCHHHHHHHHHHHHH-----hcCC---CCCCChHHH
Confidence 12223 6889998888654 333 55666664 389999999999888876542 1111 234677887
Q ss_pred HHHHHHhhhh----hhHHHHHHHHHH
Q psy8969 562 QVLIKNYCRE----SGVRNLQKHIEK 583 (1230)
Q Consensus 562 ~~li~~~~~e----~gvR~l~~~i~~ 583 (1230)
..+.+...+. +..|.+...+..
T Consensus 243 ~~i~~~~~~~~~~~G~p~~~~~l~~~ 268 (412)
T 1w5s_A 243 ELISDVYGEDKGGDGSARRAIVALKM 268 (412)
T ss_dssp HHHHHHHCGGGTSCCCHHHHHHHHHH
T ss_pred HHHHHHHHHhccCCCcHHHHHHHHHH
Confidence 7776553322 345555554443
No 284
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=98.88 E-value=4.7e-10 Score=90.95 Aligned_cols=42 Identities=31% Similarity=0.526 Sum_probs=24.7
Q ss_pred cCCCCcccCCcccccccccCchhhhhhcccccCCCCEeecccccCc
Q psy8969 1159 HSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSK 1204 (1230)
Q Consensus 1159 HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~~e~CGK 1204 (1230)
|++++||+|+ +|++.|.+.+.|++|+++|++++||.| ++|||
T Consensus 7 ~~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C--~~C~k 48 (48)
T 2epr_A 7 GRTRKQVACE--ICGKIFRDVYHLNRHKLSHSGEKPYSS--GPSSG 48 (48)
T ss_dssp CCCCCSEEET--TTTEEESSHHHHHHHGGGSCSCCCCCS--CCCCC
T ss_pred CCCCcCeeCC--CCCcccCCHHHHHHHHHhcCCCCCccC--CCCCC
Confidence 5555666663 366666666666666666666666666 34654
No 285
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=98.88 E-value=3.8e-10 Score=90.02 Aligned_cols=43 Identities=28% Similarity=0.509 Sum_probs=35.2
Q ss_pred cccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeecccccC
Q psy8969 1157 RIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCS 1203 (1230)
Q Consensus 1157 R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~~e~CG 1203 (1230)
..|++++||+|+ .|+++|.+++.|.+|+++|++++||.|+ .||
T Consensus 3 ~~h~~~k~~~C~--~C~k~f~~~~~l~~H~~~H~~~~~~~C~--~cg 45 (45)
T 2epq_A 3 SGSSGEKPYSCP--VCGLRFKRKDRMSYHVRSHDGSVGKSGP--SSG 45 (45)
T ss_dssp CCCSSCCSSEET--TTTEECSCHHHHHHHHHHHSCCCCCCCC--CCC
T ss_pred CCcCCCCCCcCC--CCCcccCCHHHHHHHHHHccCCCCCCCc--CCC
Confidence 468888888884 5888888888888888888888888884 676
No 286
>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=98.88 E-value=4.9e-10 Score=97.25 Aligned_cols=41 Identities=32% Similarity=0.439 Sum_probs=32.0
Q ss_pred ccCCCCcccCCcccccccccCchhhhhhc-ccccCCCCEeec
Q psy8969 1158 IHSGIRPYKCPVEYCEKAFSTQYSRKAHI-RTHTGEKPYRCA 1198 (1230)
Q Consensus 1158 ~HTGEKPykCpve~CgKsF~~ks~Lk~H~-RtHTGEKPy~C~ 1198 (1230)
.++|||||+|++..|+|+|.++++|++|+ ++|||+|||.|.
T Consensus 21 ~~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~ 62 (73)
T 1x3c_A 21 RYSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSA 62 (73)
T ss_dssp SSCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCC
T ss_pred cccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCcccc
Confidence 35788888885435888888888888887 578888888885
No 287
>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=98.87 E-value=1.3e-10 Score=107.54 Aligned_cols=63 Identities=14% Similarity=0.202 Sum_probs=55.2
Q ss_pred cccCCCCCccCCCCCCCCCCchhhhccccccCCCCcccCCcccccccccCchhhhhhcccccC-------CCCEee
Q psy8969 1129 KKSTSSENNVCPECKKTFSSAHHMKVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTG-------EKPYRC 1197 (1230)
Q Consensus 1129 ~~~t~~kpy~C~~CgK~F~s~s~Lk~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTG-------EKPy~C 1197 (1230)
..|+++++|.|+.|++.|.+.++|.+|+++|++++||+|. .|.....|..|+++|+| |.||.|
T Consensus 18 ~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (88)
T 1x6f_A 18 GPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAK------RQERRKQLLSKQKYADGAFADFKQESGPSS 87 (88)
T ss_dssp CSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCC------CCSCCCCCCCCCCCCCCSSSCCCCCCCCCC
T ss_pred cccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccc------hhhhHHHHHhhhcccccccccccccCCCCC
Confidence 4578899999999999999999999999999999999993 45578889999999998 566554
No 288
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.87 E-value=1e-09 Score=88.03 Aligned_cols=43 Identities=28% Similarity=0.464 Sum_probs=39.7
Q ss_pred cccccCCCCCccCCCCCCCCCCchhhhccccccCCCCcccCCc
Q psy8969 1127 TVKKSTSSENNVCPECKKTFSSAHHMKVHLRIHSGIRPYKCPV 1169 (1230)
Q Consensus 1127 ~~~~~t~~kpy~C~~CgK~F~s~s~Lk~H~R~HTGEKPykCpv 1169 (1230)
+.+.|+++++|.|+.|+|.|.+.++|.+|+++|++++||+|++
T Consensus 3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2eon_A 3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPSS 45 (46)
T ss_dssp CSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred CCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence 4567889999999999999999999999999999999999963
No 289
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Probab=98.85 E-value=1e-09 Score=87.71 Aligned_cols=44 Identities=34% Similarity=0.542 Sum_probs=32.1
Q ss_pred hhhhcccCCCceecCCCccCccccChhhHHHHHhhccCCCCccccc
Q psy8969 811 VHIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQV 856 (1230)
Q Consensus 811 ~H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~~ 856 (1230)
+|+++|++++||.|+. ||+.|...+.|..|+++|++++||.|++
T Consensus 2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2el4_A 2 SSGSSGTGVKPYGCSQ--CAKTFSLKSQLIVHQRSHTGVKPSGPSS 45 (46)
T ss_dssp CCCCCSCCCCSEECSS--SSCEESSHHHHHHHGGGSSSCCCSCCTT
T ss_pred ccccCCCCCCceECCC--CCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence 4677777777777777 7777777777777777777777777754
No 290
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.85 E-value=1.1e-09 Score=87.76 Aligned_cols=44 Identities=39% Similarity=0.688 Sum_probs=34.1
Q ss_pred hhhhcccCCCceecCCCccCccccChhhHHHHHhhccCCCCccccc
Q psy8969 811 VHIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQV 856 (1230)
Q Consensus 811 ~H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~~ 856 (1230)
+|+++|++++||.|.. ||+.|...+.|..|+++|++++||.|++
T Consensus 2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2ytj_A 2 SSGSSGTGEKPYICAE--CGKAFTIRSNLIKHQKIHTKQKPSGPSS 45 (46)
T ss_dssp CSSCTTSSCCSEECSS--SCCEESSHHHHHHHHHHTSCCCCSSCSC
T ss_pred CcccCCCCCcCeECCC--CChhhCCHHHHHHHHHHcCCCCCCCCCC
Confidence 5777777788888877 8888888888888877777777777764
No 291
>3ec2_A DNA replication protein DNAC; helicase loader, replication initiation factor, ATP-binding, nucleotide-binding; HET: DNA ADP; 2.70A {Aquifex aeolicus} PDB: 3ecc_A*
Probab=98.85 E-value=1.5e-09 Score=113.34 Aligned_cols=91 Identities=22% Similarity=0.328 Sum_probs=56.5
Q ss_pred ChHHHHHHHHHHHHHhhhcCCCCCceEEEeCCCCCCchHHHHHHHHHh----CCCeEEEecCCcchhHHHhhcccccccc
Q psy8969 358 GMEDVKKRILEFIAVSQLKGTTQGKILCFYGPPGVGKTSIAKSIARAL----NREYFRFSVGGMSDVAEIKGHRRTYVGA 433 (1230)
Q Consensus 358 G~~~vK~~i~e~l~~~~~~~~~~~~~llL~GPPG~GKTslak~iA~~l----~~~~~~~~~~~~~d~~~i~g~~~~~~g~ 433 (1230)
+++++.+.+.+|+..... ..|.+++|+||||+|||+|+++||..+ |...+.+++..+.+ .+.. .+...
T Consensus 18 ~~~~~~~~~~~~~~~~~~---~~g~~~~l~G~~G~GKTtL~~~i~~~~~~~~g~~~~~~~~~~~~~--~~~~---~~~~~ 89 (180)
T 3ec2_A 18 SQNRALLTIRVFVHNFNP---EEGKGLTFVGSPGVGKTHLAVATLKAIYEKKGIRGYFFDTKDLIF--RLKH---LMDEG 89 (180)
T ss_dssp HHHHHHHHHHHHHHSCCG---GGCCEEEECCSSSSSHHHHHHHHHHHHHHHSCCCCCEEEHHHHHH--HHHH---HHHHT
T ss_pred HHHHHHHHHHHHHHhccc---cCCCEEEEECCCCCCHHHHHHHHHHHHHHHcCCeEEEEEHHHHHH--HHHH---HhcCc
Confidence 466777777777643222 347899999999999999999999987 55655555433222 1111 11111
Q ss_pred CchhHHHHHHhhcCCCCEEEEeccccc
Q psy8969 434 MPGKVIQCMKKTKTENPLVLIDEVDKI 460 (1230)
Q Consensus 434 ~~g~i~~~~~~~~~~~pvillDEIDk~ 460 (1230)
....+...+. ..+||+|||++..
T Consensus 90 ~~~~~~~~~~----~~~llilDE~~~~ 112 (180)
T 3ec2_A 90 KDTKFLKTVL----NSPVLVLDDLGSE 112 (180)
T ss_dssp CCSHHHHHHH----TCSEEEEETCSSS
T ss_pred hHHHHHHHhc----CCCEEEEeCCCCC
Confidence 1112333322 4679999999854
No 292
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.85 E-value=1.2e-09 Score=87.52 Aligned_cols=44 Identities=39% Similarity=0.663 Sum_probs=29.7
Q ss_pred hhhhcccCCCceecCCCccCccccChhhHHHHHhhccCCCCccccc
Q psy8969 811 VHIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQV 856 (1230)
Q Consensus 811 ~H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~~ 856 (1230)
+|+++|++++||.|.. |++.|...+.|..|+++|++++||.|++
T Consensus 2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2ytn_A 2 SSGSSGTGKKPYKCNE--CGKVFTQNSHLARHRGIHTGEKPSGPSS 45 (46)
T ss_dssp CCCCCCSCCSSCBCTT--TCCBCSSHHHHHHHGGGTSCCCCCSCCC
T ss_pred CCCcCCCCCcCeECCC--CCCeeCCHHHHHHHhhhcCCCCCCCCCC
Confidence 4666666677777766 6777776666766766666666666653
No 293
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Probab=98.85 E-value=1.2e-09 Score=87.40 Aligned_cols=44 Identities=39% Similarity=0.654 Sum_probs=33.5
Q ss_pred hhhhcccCCCceecCCCccCccccChhhHHHHHhhccCCCCccccc
Q psy8969 811 VHIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQV 856 (1230)
Q Consensus 811 ~H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~~ 856 (1230)
+|+++|++++||.|+. ||+.|...+.|..|+++|++++||.|+.
T Consensus 2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2ema_A 2 SSGSSGTGEKRYKCNE--CGKVFSRNSQLSQHQKIHTGEKPSGPSS 45 (46)
T ss_dssp CSCSSCTTSCCEECSS--SCCEESSHHHHHHHHTGGGCCCCCSSSC
T ss_pred CCccCCCCCcCcCCCC--CcchhCCHHHHHHHHHhcCCCCCCCCCC
Confidence 4777777777777777 7777777777777777777777777764
No 294
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.84 E-value=1.2e-09 Score=87.38 Aligned_cols=44 Identities=41% Similarity=0.658 Sum_probs=34.8
Q ss_pred hhhhcccCCCceecCCCccCccccChhhHHHHHhhccCCCCccccc
Q psy8969 811 VHIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQV 856 (1230)
Q Consensus 811 ~H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~~ 856 (1230)
+|+++|++++||.|.. |++.|...+.|.+|+++|++++||.|..
T Consensus 2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2emm_A 2 SSGSSGTGERPHKCNE--CGKSFIQSAHLIQHQRIHTGEKPSGPSS 45 (46)
T ss_dssp CCCSCSSCCCSEECSS--SCCEESSHHHHHHHHHHHSCCCTTSSSC
T ss_pred CCcCCcCCCCCeeCCC--CChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence 4777888888888877 8888888888888888888888888764
No 295
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}
Probab=98.84 E-value=1.1e-09 Score=87.63 Aligned_cols=44 Identities=34% Similarity=0.581 Sum_probs=29.9
Q ss_pred hhhhcccCCCceecCCCccCccccChhhHHHHHhhccCCCCccccc
Q psy8969 811 VHIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQV 856 (1230)
Q Consensus 811 ~H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~~ 856 (1230)
+|+++|++++||+|+. |++.|...+.|..|+++|++++||.|++
T Consensus 2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~C~~ 45 (46)
T 2em0_A 2 SSGSSGMGEKTWKCRE--CDMCFSQASSLRLHQNVHVGEKPSGPSS 45 (46)
T ss_dssp CCCCCSCCCCCCCCSS--SCCCCSSHHHHHHHGGGGSSSSCSCSSC
T ss_pred CCcCccCCCcCeECCC--CCcccCCHHHHHHHHHHcCCCCCcCCCC
Confidence 4666677777777766 7777777777777766676666666653
No 296
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.84 E-value=9.3e-10 Score=88.16 Aligned_cols=44 Identities=30% Similarity=0.526 Sum_probs=35.6
Q ss_pred hhhhcccCCCceecCCCccCccccChhhHHHHHhhccCCCCccccc
Q psy8969 811 VHIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQV 856 (1230)
Q Consensus 811 ~H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~~ 856 (1230)
+|+++|++++||.|+. ||+.|...+.|..|+++|++++||.|..
T Consensus 2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2eoo_A 2 SSGSSGSGERPYGCNE--CGKNFGRHSHLIEHLKRHFREKSSGPSS 45 (46)
T ss_dssp CCCCCCSCCCCEECSS--SCCEESSHHHHHHHHHHHHSTTSSCCSC
T ss_pred CCCCCCCCCCCEEccc--cCcccCCHHHHHHHHHHHcCCCCCCCCC
Confidence 5778888888888877 8888888888888888888888888864
No 297
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.84 E-value=1.2e-09 Score=87.32 Aligned_cols=44 Identities=43% Similarity=0.714 Sum_probs=31.8
Q ss_pred hhhhcccCCCceecCCCccCccccChhhHHHHHhhccCCCCccccc
Q psy8969 811 VHIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQV 856 (1230)
Q Consensus 811 ~H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~~ 856 (1230)
+|+++|++++||+|.. |++.|...+.|.+|+++|++++||.|.+
T Consensus 2 ~H~~~H~~~~~~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~C~~ 45 (46)
T 2eoe_A 2 SSGSSGTGEKPYKCNE--CGKVFTQNSHLANHQRIHTGVKPSGPSS 45 (46)
T ss_dssp CCSSCCCCCCSSEETT--TTEECSSHHHHHHHHGGGSCCCSCSSCC
T ss_pred CCCCCCCCCCCeECCC--cChhhCCHHHHHHHHHHcCCCCCCCCCC
Confidence 4677777777777776 7777777777777777777777777754
No 298
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.84 E-value=1.2e-09 Score=87.42 Aligned_cols=44 Identities=45% Similarity=0.631 Sum_probs=32.9
Q ss_pred hhhhcccCCCceecCCCccCccccChhhHHHHHhhccCCCCccccc
Q psy8969 811 VHIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQV 856 (1230)
Q Consensus 811 ~H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~~ 856 (1230)
+|+++|++++||.|.. |++.|...+.|.+|+++|++++||.|.+
T Consensus 2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~ 45 (46)
T 2eq4_A 2 SSGSSGTGEKLYNCKE--CGKSFSRAPCLLKHERLHSGEKPSGPSS 45 (46)
T ss_dssp CCCCCSSCCCCCCBTT--TTBCCSCHHHHHHHHHHCCSSSCCCCCC
T ss_pred CCcccCCCCCCeECCC--CCCccCchHHHHHHHHhcCCCCCCCCCC
Confidence 4677777777777777 7777777777777777777777777754
No 299
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=98.84 E-value=7.9e-10 Score=89.57 Aligned_cols=43 Identities=26% Similarity=0.468 Sum_probs=39.9
Q ss_pred ccCCCCCccCCCCCCCCCCchhhhccccccCCCCcccCCcccccc
Q psy8969 1130 KSTSSENNVCPECKKTFSSAHHMKVHLRIHSGIRPYKCPVEYCEK 1174 (1230)
Q Consensus 1130 ~~t~~kpy~C~~CgK~F~s~s~Lk~H~R~HTGEKPykCpve~CgK 1174 (1230)
.++++++|.|++|+|.|.+.++|.+|+++|++++||+|+ +|+|
T Consensus 6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~--~C~k 48 (48)
T 2epr_A 6 SGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSG--PSSG 48 (48)
T ss_dssp CCCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSC--CCCC
T ss_pred CCCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCC--CCCC
Confidence 457789999999999999999999999999999999995 5986
No 300
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A
Probab=98.84 E-value=1.2e-09 Score=87.53 Aligned_cols=44 Identities=43% Similarity=0.734 Sum_probs=33.3
Q ss_pred hhhhcccCCCceecCCCccCccccChhhHHHHHhhccCCCCccccc
Q psy8969 811 VHIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQV 856 (1230)
Q Consensus 811 ~H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~~ 856 (1230)
+|+++|++++||.|+. |++.|...+.|.+|+++|++++||.|+.
T Consensus 2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2emk_A 2 SSGSSGTGEKPYECKE--CGKAFSQTTHLIQHQRVHTGEKPSGPSS 45 (46)
T ss_dssp CCCCCCSSSCSCBCSS--SCCBCSCHHHHHHHHHHHSSCCCSSCCC
T ss_pred CCCCccCCCCceECCC--CCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence 4777777777777777 7777777777777777777777777754
No 301
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.84 E-value=1.3e-09 Score=87.17 Aligned_cols=44 Identities=41% Similarity=0.659 Sum_probs=33.0
Q ss_pred hhhhcccCCCceecCCCccCccccChhhHHHHHhhccCCCCccccc
Q psy8969 811 VHIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQV 856 (1230)
Q Consensus 811 ~H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~~ 856 (1230)
+|+++|++++||+|+. ||+.|...+.|..|+++|++++||.|..
T Consensus 2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~ 45 (46)
T 2eml_A 2 SSGSSGTGEKPYECSV--CGKAFSHRQSLSVHQRIHSGKKPSGPSS 45 (46)
T ss_dssp CCCCCCSSCCSEECSS--SCCEESSHHHHHHHHGGGSSCCCSCSSC
T ss_pred CccCCcCCCCCeeCCC--cCCccCCHHHHHHHHHHhcCCCCCCCCC
Confidence 4777777777777777 7777777777777777777777777754
No 302
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.84 E-value=1.2e-09 Score=87.52 Aligned_cols=44 Identities=39% Similarity=0.662 Sum_probs=35.8
Q ss_pred hhhhcccCCCceecCCCccCccccChhhHHHHHhhccCCCCccccc
Q psy8969 811 VHIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQV 856 (1230)
Q Consensus 811 ~H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~~ 856 (1230)
+|+++|++++||.|.. ||+.|...+.|..|+++|++++||.|.+
T Consensus 2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2emp_A 2 SSGSSGTGVKPYMCNE--CGKAFSVYSSLTTHQVIHTGEKPSGPSS 45 (46)
T ss_dssp CCCSCSSCCCSEECSS--SCCEESCHHHHHHHHHHHHCCSCCSCCC
T ss_pred CcccccCCCcCeECCC--CCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence 5778888888888877 8888888888888888888888888864
No 303
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.83 E-value=1.7e-09 Score=86.66 Aligned_cols=42 Identities=29% Similarity=0.503 Sum_probs=39.1
Q ss_pred cccccCCCCCccCCCCCCCCCCchhhhccccccCCCCcccCC
Q psy8969 1127 TVKKSTSSENNVCPECKKTFSSAHHMKVHLRIHSGIRPYKCP 1168 (1230)
Q Consensus 1127 ~~~~~t~~kpy~C~~CgK~F~s~s~Lk~H~R~HTGEKPykCp 1168 (1230)
+.+.|+++++|.|+.|+|.|.+.++|.+|+++|++++||+|+
T Consensus 3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2enh_A 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS 44 (46)
T ss_dssp CCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence 445678999999999999999999999999999999999996
No 304
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.83 E-value=1.4e-09 Score=86.09 Aligned_cols=43 Identities=33% Similarity=0.545 Sum_probs=33.0
Q ss_pred hhhcccCCCceecCCCccCccccChhhHHHHHhhccCCCCccccc
Q psy8969 812 HIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQV 856 (1230)
Q Consensus 812 H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~~ 856 (1230)
|+++|++++||.|.. ||+.|...+.|..|+++|++++||.|.+
T Consensus 1 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~ 43 (44)
T 2emx_A 1 GSSGSSGEKPFGCSC--CEKAFSSKSYLLVHQQTHAEEKPSGPSS 43 (44)
T ss_dssp CCCCCSSCCCEECSS--SSCEESSHHHHHHHHHHHTSSCSCSCCC
T ss_pred CCCCcCCCcCccCCC--CCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence 667777777777777 7777777777777777777777777764
No 305
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.83 E-value=1.3e-09 Score=87.20 Aligned_cols=44 Identities=41% Similarity=0.652 Sum_probs=32.2
Q ss_pred hhhhcccCCCceecCCCccCccccChhhHHHHHhhccCCCCccccc
Q psy8969 811 VHIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQV 856 (1230)
Q Consensus 811 ~H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~~ 856 (1230)
+|+++|++++||.|.. |++.|...+.|..|+++|++++||.|++
T Consensus 2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2eq0_A 2 SSGSSGTGEKPYKCHE--CGKVFRRNSHLARHQLIHTGEKPSGPSS 45 (46)
T ss_dssp CCCCCTTCCCCEECTT--TCCEESSHHHHHHHHTTTCCCCCSCCSC
T ss_pred CCCcCCCCCCCeECCC--CCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence 4677777777777777 7777777777777777777777777754
No 306
>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.83 E-value=7.2e-10 Score=87.63 Aligned_cols=40 Identities=25% Similarity=0.316 Sum_probs=31.1
Q ss_pred cccCCCCcccCCcccccccccCchhhhhhcccccCCCCEeec
Q psy8969 1157 RIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCA 1198 (1230)
Q Consensus 1157 R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C~ 1198 (1230)
++|++++||+|+ .|++.|.+++.|.+|+++|++++||.|+
T Consensus 3 ~~h~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~ 42 (43)
T 2yrm_A 3 SGSSGNGAFFCN--ECDCRFSEEASLKRHTLQTHSDKSGPSS 42 (43)
T ss_dssp SCCSSSCCBCCS--SSCCCBSSHHHHHHHHHHHTCTTCSSSC
T ss_pred cCcCCCCCEECC--CCCCeeCChHHHHHHHHhhCCCCCccCC
Confidence 567788888884 5888888888888888888888888773
No 307
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.83 E-value=1.2e-09 Score=87.52 Aligned_cols=44 Identities=39% Similarity=0.720 Sum_probs=35.0
Q ss_pred hhhhcccCCCceecCCCccCccccChhhHHHHHhhccCCCCccccc
Q psy8969 811 VHIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQV 856 (1230)
Q Consensus 811 ~H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~~ 856 (1230)
+|+++|++++||.|.. ||+.|...+.|..|+++|++++||.|++
T Consensus 2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2emh_A 2 SSGSSGTGERPYICTV--CGKAFTDRSNLIKHQKIHTGEKPSGPSS 45 (46)
T ss_dssp CCCCSCSCCCSEECTT--TCCEESSHHHHHHHHHHHHCSSCSSSCC
T ss_pred CCCCCCCCCCCcCCCC--CCchhCCHHHHHHHHHhcCCCCCCCCCC
Confidence 4777888888888877 8888888888888888888888888764
No 308
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.83 E-value=1.3e-09 Score=87.31 Aligned_cols=44 Identities=43% Similarity=0.752 Sum_probs=35.1
Q ss_pred hhhhcccCCCceecCCCccCccccChhhHHHHHhhccCCCCccccc
Q psy8969 811 VHIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQV 856 (1230)
Q Consensus 811 ~H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~~ 856 (1230)
+|+++|++++||.|.. |++.|...+.|..|+++|++++||.|++
T Consensus 2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~ 45 (46)
T 2ytk_A 2 SSGSSGSGEKPYKCNE--CGKVFTQNSHLTNHWRIHTGEKPSGPSS 45 (46)
T ss_dssp CCCCCSSSSCSEECSS--SCCEESSHHHHHHHHHHHSSSSCSSCCC
T ss_pred CCcccCCCCCCEeCCc--CCCccCCHHHHHHHHHHHCCCCCCCCCC
Confidence 4777888888888877 8888888888888888888888888864
No 309
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.83 E-value=1.4e-09 Score=87.10 Aligned_cols=44 Identities=41% Similarity=0.664 Sum_probs=32.9
Q ss_pred hhhhcccCCCceecCCCccCccccChhhHHHHHhhccCCCCccccc
Q psy8969 811 VHIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQV 856 (1230)
Q Consensus 811 ~H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~~ 856 (1230)
+|+++|++++||.|+. |++.|...+.|..|+++|++++||.|+.
T Consensus 2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2ep2_A 2 SSGSSGTGEKPYECSI--CGKSFTKKSQLHVHQQIHTGEKPSGPSS 45 (46)
T ss_dssp CSSSCSSCCCSEECSS--SCCEESSHHHHHHHHHTTSSCCSCCSCC
T ss_pred CCCCCCCCCcCcCCCC--CCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence 4777777777777777 7777777777777777777777777753
No 310
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.83 E-value=1.3e-09 Score=87.13 Aligned_cols=44 Identities=39% Similarity=0.637 Sum_probs=34.8
Q ss_pred hhhhcccCCCceecCCCccCccccChhhHHHHHhhccCCCCccccc
Q psy8969 811 VHIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQV 856 (1230)
Q Consensus 811 ~H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~~ 856 (1230)
+|+++|++++||+|.. ||+.|...+.|..|+++|++++||.|++
T Consensus 2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2emy_A 2 SSGSSGTGENPYECHE--CGKAFSRKYQLISHQRTHAGEKPSGPSS 45 (46)
T ss_dssp CCCCCCCSSCCEECSS--SCCEESSHHHHHHHHHHHTTSCCSCSSC
T ss_pred CCCCCCCCCcCcCCCC--CCcccCcHHHHHHHHHHcCCCCCCCCCC
Confidence 4777888888888877 8888888888888888888888888764
No 311
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.83 E-value=9.6e-10 Score=88.08 Aligned_cols=43 Identities=21% Similarity=0.336 Sum_probs=39.6
Q ss_pred ccccCCCCCccCCCCCCCCCCchhhhccccccCCCCcccCCcccc
Q psy8969 1128 VKKSTSSENNVCPECKKTFSSAHHMKVHLRIHSGIRPYKCPVEYC 1172 (1230)
Q Consensus 1128 ~~~~t~~kpy~C~~CgK~F~s~s~Lk~H~R~HTGEKPykCpve~C 1172 (1230)
.+.|+++++|.|+.|+|.|.+.++|.+|+++|++++||+|+ .|
T Consensus 4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~--~C 46 (46)
T 2ytt_A 4 GSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPS--SG 46 (46)
T ss_dssp SSSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCC--CC
T ss_pred CCCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCC--CC
Confidence 35678899999999999999999999999999999999995 47
No 312
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.83 E-value=1.4e-09 Score=87.00 Aligned_cols=44 Identities=41% Similarity=0.594 Sum_probs=30.1
Q ss_pred hhhhcccCCCceecCCCccCccccChhhHHHHHhhccCCCCccccc
Q psy8969 811 VHIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQV 856 (1230)
Q Consensus 811 ~H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~~ 856 (1230)
+|+++|++++||+|.. ||+.|...+.|..|+++|++++||.|+.
T Consensus 2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2eop_A 2 SSGSSGTGEKPHECRE--CGKSFSFNSQLIVHQRIHTGENPSGPSS 45 (46)
T ss_dssp CCCCSCCCCCSCBCTT--TCCBCSSHHHHHHHHTTTTTSCCSCCCC
T ss_pred CCccccCCCCCeeCCC--CCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence 4666677777777766 7777777777777777777777776653
No 313
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.82 E-value=1.4e-09 Score=86.87 Aligned_cols=44 Identities=32% Similarity=0.476 Sum_probs=33.3
Q ss_pred hhhhcccCCCceecCCCccCccccChhhHHHHHhhccCCCCccccc
Q psy8969 811 VHIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQV 856 (1230)
Q Consensus 811 ~H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~~ 856 (1230)
+|+++|++++||+|+. |++.|...+.|..|+++|++++||+|..
T Consensus 2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2en8_A 2 SSGSSGSGEKSHTCDE--CGKNFCYISALRIHQRVHMGEKCSGPSS 45 (46)
T ss_dssp CCCCCCCCCSSEECTT--TCCEESSHHHHHHHHTTTCCSCSSCCSC
T ss_pred CccccCCCCCCeECCC--cCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence 4777777777777777 7777777777777777777777777754
No 314
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.82 E-value=1.5e-09 Score=86.79 Aligned_cols=44 Identities=41% Similarity=0.700 Sum_probs=32.1
Q ss_pred hhhhcccCCCceecCCCccCccccChhhHHHHHhhccCCCCccccc
Q psy8969 811 VHIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQV 856 (1230)
Q Consensus 811 ~H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~~ 856 (1230)
+|+++|++++||.|+. ||+.|...+.|..|+++|++++||.|..
T Consensus 2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~ 45 (46)
T 2eme_A 2 SSGSSGSGEKPYVCDY--CGKAFGLSAELVRHQRIHTGEKPSGPSS 45 (46)
T ss_dssp CCCCTTCCCCSEECSS--SCCEESSHHHHHHHHGGGCCCSCCSSCC
T ss_pred CCCCCCCCCCCeECCC--CChhhCCHHHHHHHHHhcCCCCCCCCCC
Confidence 4677777777777777 7777777777777777777777777754
No 315
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.82 E-value=1.4e-09 Score=86.94 Aligned_cols=44 Identities=43% Similarity=0.728 Sum_probs=34.5
Q ss_pred hhhhcccCCCceecCCCccCccccChhhHHHHHhhccCCCCccccc
Q psy8969 811 VHIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQV 856 (1230)
Q Consensus 811 ~H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~~ 856 (1230)
+|+++|++++||.|.. ||+.|...+.|.+|+++|++++||.|++
T Consensus 2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~ 45 (46)
T 2ep3_A 2 SSGSSGTGEKPYRCAE--CGKAFTDRSNLFTHQKIHTGEKPSGPSS 45 (46)
T ss_dssp CCCSSSSCCCSEECSS--SCCEESSHHHHHHHHTTTTTSCCCCTTC
T ss_pred CCCCCCCCCCCeECCC--CCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence 5777788888888877 8888888888888888888888887763
No 316
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.82 E-value=1.5e-09 Score=86.86 Aligned_cols=44 Identities=43% Similarity=0.702 Sum_probs=31.7
Q ss_pred hhhhcccCCCceecCCCccCccccChhhHHHHHhhccCCCCccccc
Q psy8969 811 VHIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQV 856 (1230)
Q Consensus 811 ~H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~~ 856 (1230)
.|+++|++++||.|+. ||+.|...+.|..|+++|++++||.|.+
T Consensus 2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2ene_A 2 SSGSSGTGEKPYKCNE--CGKVFRHNSYLSRHQRIHTGEKPSGPSS 45 (46)
T ss_dssp CCCSSCCCSSSEECSS--SCCEESSHHHHHHHHTTTCCCCCCSCCC
T ss_pred CcccCCCCCCCeECCC--CCchhCChHHHHHHHhhcCCCCCCCCCC
Confidence 3667777777777776 7777777777777777777777777753
No 317
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.82 E-value=1.3e-09 Score=87.17 Aligned_cols=44 Identities=34% Similarity=0.580 Sum_probs=32.3
Q ss_pred hhhhcccCCCceecCCCccCccccChhhHHHHHhhccCCCCccccc
Q psy8969 811 VHIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQV 856 (1230)
Q Consensus 811 ~H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~~ 856 (1230)
+|+++|++++||+|.. |++.|...+.|..|+++|++++||.|..
T Consensus 2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2eoq_A 2 SSGSSGTGEKPFKCDI--CGKSFCGRSRLNRHSMVHTAEKPSGPSS 45 (46)
T ss_dssp CCCCCSSSSCSCCCSS--SCCCCSSHHHHHHHHHHTTCCCSSSCCC
T ss_pred CCCCCCCCCCCcCCCc--CCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence 4677777777777777 7777777777777777777777777754
No 318
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A
Probab=98.82 E-value=1.7e-09 Score=86.63 Aligned_cols=43 Identities=37% Similarity=0.665 Sum_probs=31.4
Q ss_pred hhhcccCCCceecCCCccCccccChhhHHHHHhhccCCCCccccc
Q psy8969 812 HIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQV 856 (1230)
Q Consensus 812 H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~~ 856 (1230)
|+++|++++||.|.. |++.|...+.|.+|+++|++++||.|.+
T Consensus 3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2ely_A 3 SGSSGTGEKPFKCVE--CGKGFSRRSALNVHHKLHTGEKPSGPSS 45 (46)
T ss_dssp CCCCCCCCCSBCCSS--SCCCBSSTTHHHHHHHHHSCCSSCSCCC
T ss_pred CCCCCCCCCCcccCc--cCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence 667777777777777 7777777777777777777777777754
No 319
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.82 E-value=1.6e-09 Score=84.92 Aligned_cols=41 Identities=29% Similarity=0.505 Sum_probs=38.3
Q ss_pred cccccCCCCCccCCCCCCCCCCchhhhccccccCCCCcccC
Q psy8969 1127 TVKKSTSSENNVCPECKKTFSSAHHMKVHLRIHSGIRPYKC 1167 (1230)
Q Consensus 1127 ~~~~~t~~kpy~C~~CgK~F~s~s~Lk~H~R~HTGEKPykC 1167 (1230)
+.+.|+++++|.|+.||+.|.+.++|.+|+++|+|++||+|
T Consensus 2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C 42 (42)
T 2eos_A 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG 42 (42)
T ss_dssp CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence 44567889999999999999999999999999999999998
No 320
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.82 E-value=1.2e-09 Score=87.40 Aligned_cols=44 Identities=39% Similarity=0.684 Sum_probs=32.9
Q ss_pred hhhhcccCCCceecCCCccCccccChhhHHHHHhhccCCCCccccc
Q psy8969 811 VHIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQV 856 (1230)
Q Consensus 811 ~H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~~ 856 (1230)
+|+++|++++||.|.. ||+.|...+.|..|+++|++++||.|++
T Consensus 2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~ 45 (46)
T 2yu8_A 2 SSGSSGTGEKPYKCNE--CGKVFTQNSHLARHRRVHTGGKPSGPSS 45 (46)
T ss_dssp CCCCCCCCCSSEECSS--SCCEESSSHHHHHHTHHHHSCCCSCSCC
T ss_pred CcCcCCCCCCCeECCc--CCchhCCHHHHHHHHHhcCCCCCCCCCC
Confidence 4677777777777777 7777777777777777777777777764
No 321
>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.82 E-value=1.6e-09 Score=86.69 Aligned_cols=44 Identities=39% Similarity=0.685 Sum_probs=34.3
Q ss_pred hhhhcccCCCceecCCCccCccccChhhHHHHHhhccCCCCccccc
Q psy8969 811 VHIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQV 856 (1230)
Q Consensus 811 ~H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~~ 856 (1230)
+|+++|++++||.|.. |++.|...+.|..|+++|++++||.|.+
T Consensus 2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~ 45 (46)
T 2ytd_A 2 SSGSSGSGEKPYKCSE--CGKAFHRHTHLNEHRRIHTGYRPSGPSS 45 (46)
T ss_dssp CCCCCSCCCCSEECSS--SCCEESSHHHHHHHHHHHTCCCSSCSSC
T ss_pred CCccccCCCcCeECCC--CCCeeCChHHHHHHHHHcCCCCCCCCCC
Confidence 4777788888888877 8888888888888888888888887764
No 322
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.82 E-value=1.7e-09 Score=86.64 Aligned_cols=44 Identities=34% Similarity=0.574 Sum_probs=31.3
Q ss_pred hhhhcccCCCceecCCCccCccccChhhHHHHHhhccCCCCccccc
Q psy8969 811 VHIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQV 856 (1230)
Q Consensus 811 ~H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~~ 856 (1230)
.|+++|++++||.|.. ||+.|...+.|..|+++|++++||.|..
T Consensus 2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2emf_A 2 SSGSSGTGGKHFECTE--CGKAFTRKSTLSMHQKIHTGEKPSGPSS 45 (46)
T ss_dssp CCCSSSSSSCCEECSS--SCCEESCHHHHHHHGGGTSCSSCSCCCC
T ss_pred ccccccCCCCCeECCC--CCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence 3667777777777766 7777777777777777777777777753
No 323
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.82 E-value=1.8e-09 Score=85.64 Aligned_cols=42 Identities=36% Similarity=0.497 Sum_probs=39.7
Q ss_pred hhcccccCCCCEeecccccCccccchhhHHHHhhhccCcccccc
Q psy8969 1184 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTDEFQMSG 1227 (1230)
Q Consensus 1184 ~H~RtHTGEKPy~C~~e~CGKsF~~ks~LkrH~R~HtGE~~~s~ 1227 (1230)
.|+++|++++||.| ++||+.|.++.+|.+|+++|++++.+++
T Consensus 2 ~H~~~H~~~k~~~C--~~C~k~F~~~~~L~~H~~~H~~~k~~~~ 43 (44)
T 2epv_A 2 SSGSSGSGEKPYEC--NECGKAFIWKSLLIVHERTHAGVSGPSS 43 (44)
T ss_dssp CCCCCCCCCCSEEC--SSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred CCCcccCCCcCeEC--CCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence 69999999999999 4799999999999999999999999875
No 324
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.82 E-value=1.6e-09 Score=86.60 Aligned_cols=44 Identities=34% Similarity=0.590 Sum_probs=32.8
Q ss_pred hhhhcccCCCceecCCCccCccccChhhHHHHHhhccCCCCccccc
Q psy8969 811 VHIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQV 856 (1230)
Q Consensus 811 ~H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~~ 856 (1230)
+|+++|++++||.|+. ||+.|...+.|.+|+++|++++||.|..
T Consensus 2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~ 45 (46)
T 2eov_A 2 SSGSSGTGEKPYKCSD--CGKSFTWKSRLRIHQKCHTGERHSGPSS 45 (46)
T ss_dssp CCCCCCSSCCSCBCSS--SCCBCSSHHHHHHHHHHHSCCSSCCSCC
T ss_pred CCCCCCCCCCCccCCc--cChhhCCHHHHHHHHHhcCCCCCCCCCC
Confidence 4777777777777777 7777777777777777777777777754
No 325
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.82 E-value=1.6e-09 Score=86.83 Aligned_cols=44 Identities=30% Similarity=0.506 Sum_probs=32.2
Q ss_pred hhhhcccCCCceecCCCccCccccChhhHHHHHhhccCCCCccccc
Q psy8969 811 VHIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQV 856 (1230)
Q Consensus 811 ~H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~~ 856 (1230)
+|+++|++++||.|.. ||+.|...+.|..|+++|++++||.|..
T Consensus 2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~ 45 (46)
T 2em5_A 2 SSGSSGSSTKSHQCHE--CGRGFTLKSHLNQHQRIHTGEKPSGPSS 45 (46)
T ss_dssp CCCCCCCCSCSEECSS--SCCEESSHHHHHHHHTTTSCSCCSSCCC
T ss_pred CCcCCCCCCCCeECCc--CCCccCCHHHHHHHHHHhCCCCCCCCCC
Confidence 4677777777777777 7777777777777777777777777754
No 326
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.82 E-value=1.9e-09 Score=86.26 Aligned_cols=43 Identities=40% Similarity=0.666 Sum_probs=30.9
Q ss_pred hhhcccCCCceecCCCccCccccChhhHHHHHhhccCCCCccccc
Q psy8969 812 HIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQV 856 (1230)
Q Consensus 812 H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~~ 856 (1230)
|+++|++++||.|.. |++.|...+.|.+|+++|++++||.|.+
T Consensus 3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2em7_A 3 SGSSGTGEKPYKCEE--CGKGFICRRDLYTHHMVHTGEKPSGPSS 45 (46)
T ss_dssp CCCSSSCCCSEECSS--SCCEESCHHHHHHHGGGGTTCCCSSTTC
T ss_pred CCCCCCCCcCccCCC--ccchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence 666777777777766 7777777777777777777777777754
No 327
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.81 E-value=1.7e-09 Score=86.43 Aligned_cols=44 Identities=32% Similarity=0.433 Sum_probs=33.2
Q ss_pred hhhhcccCCCceecCCCccCccccChhhHHHHHhhccCCCCccccc
Q psy8969 811 VHIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQV 856 (1230)
Q Consensus 811 ~H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~~ 856 (1230)
+|+++|++++||.|+. ||+.|...+.|..|+++|++++||.|..
T Consensus 2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2epw_A 2 SSGSSGTGEKPCKCTE--CGKAFCWKSQLIMHQRTHVDDKHSGPSS 45 (46)
T ss_dssp CCCCCCCCCCSEECSS--SCCEESSSHHHHHHHHHCCSCCCSCCCC
T ss_pred cCcccCCCCCCeeCCC--CCCccCCHHHHHHHHHHhCCCCCCCCCC
Confidence 4777777777777777 7777777777777777777777777764
No 328
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.81 E-value=1.9e-09 Score=86.31 Aligned_cols=43 Identities=40% Similarity=0.682 Sum_probs=28.3
Q ss_pred hhhcccCCCceecCCCccCccccChhhHHHHHhhccCCCCccccc
Q psy8969 812 HIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQV 856 (1230)
Q Consensus 812 H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~~ 856 (1230)
|+++|++++||.|.. |++.|...+.|++|+++|++++||.|..
T Consensus 3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2epz_A 3 SGSSGTGEKPFDCID--CGKAFSDHIGLNQHRRIHTGEKPSGPSS 45 (46)
T ss_dssp CCSSCCCCCSBCCTT--TCCCBSSHHHHHHHHTTTTTCCCCSSCC
T ss_pred CCCCcCCCCCeECCC--CCceeCCHHHHHHHHHHhCCCCCCCCCC
Confidence 566666666666666 6666666666666666666666666653
No 329
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.81 E-value=1.6e-09 Score=84.75 Aligned_cols=42 Identities=38% Similarity=0.644 Sum_probs=39.2
Q ss_pred hhcccccCCCCEeecccccCccccchhhHHHHhhhccCcccccc
Q psy8969 1184 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTDEFQMSG 1227 (1230)
Q Consensus 1184 ~H~RtHTGEKPy~C~~e~CGKsF~~ks~LkrH~R~HtGE~~~s~ 1227 (1230)
.|+++|+|++||.| +.||++|.++.+|.+|+++|+|++.+.|
T Consensus 1 ~H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~~~~~C 42 (42)
T 2en2_A 1 GSSGSSGGEKPYKC--ETCGARFVQVAHLRAHVLIHTGSGPSSG 42 (42)
T ss_dssp CCCCCCCSSCSEEC--TTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred CCCcccCCCCCEeC--CCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence 38999999999999 4799999999999999999999998875
No 330
>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.81 E-value=1.9e-09 Score=86.26 Aligned_cols=44 Identities=36% Similarity=0.700 Sum_probs=30.7
Q ss_pred hhhhcccCCCceecCCCccCccccChhhHHHHHhhccCCCCccccc
Q psy8969 811 VHIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQV 856 (1230)
Q Consensus 811 ~H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~~ 856 (1230)
+|+++|++++||.|+. ||+.|...+.|..|+++|++++||.|..
T Consensus 2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~ 45 (46)
T 2en1_A 2 SSGSSGSGEKPFKCEE--CGKRFTQNSQLHSHQRVHTGEKPSGPSS 45 (46)
T ss_dssp CSTTCCCCCCSEEETT--TTEEESSHHHHHHHGGGGSCCCCSCCCC
T ss_pred CcccCCCCCCCeeCCC--CCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence 4666777777777766 7777777777777777777777777653
No 331
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.81 E-value=2e-09 Score=86.19 Aligned_cols=43 Identities=47% Similarity=0.716 Sum_probs=29.2
Q ss_pred hhhcccCCCceecCCCccCccccChhhHHHHHhhccCCCCccccc
Q psy8969 812 HIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQV 856 (1230)
Q Consensus 812 H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~~ 856 (1230)
|+++|++++||.|.. |++.|...+.|.+|+++|++++||.|.+
T Consensus 3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2ytq_A 3 SGSSGAGEKPYGCSE--CGKAFSSKSYLIIHMRTHSGEKPSGPSS 45 (46)
T ss_dssp CSSCSSCCCSCBCSS--SCCBCSCHHHHHHHHTTTCCSCSSCCCC
T ss_pred CCcCcCCCCCcCCCc--cChhhCChHHHHHHHHHhCCCCCCCCCC
Confidence 566666667777766 6677766666666666666666666653
No 332
>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.81 E-value=1.9e-09 Score=86.26 Aligned_cols=43 Identities=40% Similarity=0.661 Sum_probs=40.5
Q ss_pred hhcccccCCCCEeecccccCccccchhhHHHHhhhccCccccccc
Q psy8969 1184 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTDEFQMSGL 1228 (1230)
Q Consensus 1184 ~H~RtHTGEKPy~C~~e~CGKsF~~ks~LkrH~R~HtGE~~~s~~ 1228 (1230)
+|+++|++++||.|. +||+.|.++.+|.+|+++|++++.+.|-
T Consensus 2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~ 44 (46)
T 2eoz_A 2 SSGSSGTGEKPYSCN--VCGKAFVLSAHLNQHLRVHTQETLSGPS 44 (46)
T ss_dssp CSCCCCSSCCSEEET--TTTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred CccccCCCCCCeECc--ccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence 699999999999994 7999999999999999999999998874
No 333
>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.81 E-value=1.7e-09 Score=86.71 Aligned_cols=42 Identities=26% Similarity=0.458 Sum_probs=38.7
Q ss_pred ccccCCCCCccCCCCCCCCCCchhhhccccccCCCCcccCCc
Q psy8969 1128 VKKSTSSENNVCPECKKTFSSAHHMKVHLRIHSGIRPYKCPV 1169 (1230)
Q Consensus 1128 ~~~~t~~kpy~C~~CgK~F~s~s~Lk~H~R~HTGEKPykCpv 1169 (1230)
.+.|+++++|.|+.|+|.|.+.++|.+|+++|++++||+|++
T Consensus 4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2eom_A 4 GSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPSS 45 (46)
T ss_dssp CCCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCCC
T ss_pred CCCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCCC
Confidence 356788999999999999999999999999999999999963
No 334
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Probab=98.81 E-value=1.9e-09 Score=86.11 Aligned_cols=44 Identities=48% Similarity=0.690 Sum_probs=30.7
Q ss_pred hhhhcccCCCceecCCCccCccccChhhHHHHHhhccCCCCccccc
Q psy8969 811 VHIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQV 856 (1230)
Q Consensus 811 ~H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~~ 856 (1230)
.|+++|++++||.|.. ||+.|...+.|..|+++|++++||.|..
T Consensus 2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~ 45 (46)
T 2em9_A 2 SSGSSGTGEKPYNCKE--CGKSFRWASCLLKHQRVHSGEKPSGPSS 45 (46)
T ss_dssp CSCCSCCCCCSEECSS--SCCEESSHHHHHHHGGGGTSCCCCSTTC
T ss_pred CCCCCCCCCcCeECCc--cccccCChHHHHHHHHHhCCCCCCCCCC
Confidence 3666777777777766 7777777777777777777777777653
No 335
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.81 E-value=2.1e-09 Score=86.01 Aligned_cols=43 Identities=33% Similarity=0.536 Sum_probs=28.4
Q ss_pred hhhcccCCCceecCCCccCccccChhhHHHHHhhccCCCCccccc
Q psy8969 812 HIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQV 856 (1230)
Q Consensus 812 H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~~ 856 (1230)
|+++|++++||.|.. ||+.|...+.|..|+++|++++||.|..
T Consensus 3 h~~~h~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~C~~ 45 (46)
T 2elz_A 3 SGSSGSVEKPYKCED--CGKGYNRRLNLDMHQRVHMGEKTSGPSS 45 (46)
T ss_dssp CCSCCCCCSSCBCSS--SCCBCSSHHHHHHHGGGGGSCCCCCSCC
T ss_pred CCCCCCCCCCeeCcc--cCchhCCHHHHHHHHHhcCCCCCCCCCC
Confidence 566666666666666 6666666666666666666666666653
No 336
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.80 E-value=1.6e-09 Score=86.52 Aligned_cols=43 Identities=44% Similarity=0.778 Sum_probs=27.9
Q ss_pred hhhhcccCCCceecCCCccCccccChhhHHHHHhhccCCCCcccc
Q psy8969 811 VHIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQ 855 (1230)
Q Consensus 811 ~H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~ 855 (1230)
+|+++|++++||.|.. ||+.|...+.|..|+++|++++||.|.
T Consensus 2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~ 44 (46)
T 2ytr_A 2 SSGSSGTGEKPYKCNE--CGKAFSQTSKLARHQRIHTGEKPSGPS 44 (46)
T ss_dssp CSSCCCSSCCTTCCTT--TCCCCSSHHHHHHHHTTTTTCSCCCSC
T ss_pred CCCcCCCCCcCcCCCC--CCCccCCHHHHHHHHHhcCCCCCCCCC
Confidence 3566666666666666 666666666666666666666666665
No 337
>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.80 E-value=1.7e-09 Score=86.53 Aligned_cols=44 Identities=39% Similarity=0.666 Sum_probs=34.6
Q ss_pred hhhhcccCCCceecCCCccCccccChhhHHHHHhhccCCCCccccc
Q psy8969 811 VHIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQV 856 (1230)
Q Consensus 811 ~H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~~ 856 (1230)
+|+++|++++||.|.. |++.|...+.|..|+++|++++||.|.+
T Consensus 2 ~h~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2en6_A 2 SSGSSGSGEKPYGCNE--CGKTFSQKSILSAHQRTHTGEKPSGPSS 45 (46)
T ss_dssp CCSCCCCSSCCEEETT--TTEEESSHHHHHHHHHHHSSCCCSSSCC
T ss_pred CCCCccCCCcCeECCC--CCcccCchHHHHHHHHHcCCCCCCCCCC
Confidence 4777788888888877 8888888888888888888888887764
No 338
>1zbo_A Hypothetical protein BPP1347; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.60A {Bordetella parapertussis} SCOP: b.122.1.10
Probab=98.80 E-value=4.2e-09 Score=113.40 Aligned_cols=106 Identities=11% Similarity=-0.002 Sum_probs=84.6
Q ss_pred ccchhccc-e-eeccCCcccceeeeccC-----CcHHHHHHHHHHHHHHHHHHHhC-----cCCHHHHHHHHhccCCCCC
Q psy8969 123 TFYHVMQM-A-AENDDNFNDHKVSLVKD-----LSEVYSALMQEVIKTVRDIISMN-----PLYKEQLMILLQQENSPVV 190 (1230)
Q Consensus 123 ~~~~~~~~-~-~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 190 (1230)
.=+.++.| + ++.-+.|+.+.|+++++ .+.+.+||++.+++.|++|++++ +.++. + .++
T Consensus 87 ~G~~R~rI~~~~~~~~~y~~a~ve~l~~~~~~~~~~e~~al~~~l~~~~~~~~~~~~~~~~~~l~~-----~-----~~~ 156 (210)
T 1zbo_A 87 TGTGRFRLHACTQGKYGLWTGQAEPVPDDAPLEVPPELARSASALGRLIARLQREGVPPHIMPMAA-----P-----FRL 156 (210)
T ss_dssp EEEEEEEEEEEEECGGGCEEEEEEEECCCCCCCCCGGGHHHHHHHHHHHHHHHHTTCCTTTCSBCS-----C-----CCT
T ss_pred EEEEEEEEEEEeecCCCcEEEEEEEcCCCCCCCCcHHHHHHHHHHHHHHHHHHHhccccccccCCC-----c-----CCC
Confidence 44566666 4 44556789999988865 34578999999999999999998 55544 2 258
Q ss_pred CChhHHHHHHHhcCCCChHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHH
Q psy8969 191 DNPIYLADLGAALTGAEGTEQQAILEEMDIPKRLMLSLSLLKKELELNK 239 (1230)
Q Consensus 191 ~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~r~~~~~~~~~~~~~~~~ 239 (1230)
+||++|||++|++++++.++||+|||+ |+.+||++++.+|.+|+..++
T Consensus 157 ~dp~~lad~ia~~l~l~~~ekQ~lLe~-d~~~Rl~~l~~~L~~e~~~~~ 204 (210)
T 1zbo_A 157 DDCGWVADRWAEMLSLPPADKARLLLL-PPLDRLREIDAVLAADGHALE 204 (210)
T ss_dssp TCHHHHHHHHHHHSCCCHHHHHHHHHS-CHHHHHHHHHHHHHC------
T ss_pred CCHHHHHHHHHHhCCCCHHHHHHHHhC-CHHHHHHHHHHHHHHHhhhhh
Confidence 999999999999999999999999999 999999999999999986553
No 339
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}
Probab=98.80 E-value=2.2e-09 Score=85.90 Aligned_cols=44 Identities=32% Similarity=0.561 Sum_probs=31.8
Q ss_pred hhhhcccCCCceecCCCccCccccChhhHHHHHhhccCCCCccccc
Q psy8969 811 VHIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQV 856 (1230)
Q Consensus 811 ~H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~~ 856 (1230)
+|+++|++++||.|+. |++.|...+.|..|+++|++++||.|..
T Consensus 2 ~h~~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~ 45 (46)
T 2el6_A 2 SSGSSGAGVNPYKCSQ--CEKSFSGKLRLLVHQRMHTREKPSGPSS 45 (46)
T ss_dssp CSCCSSCCCCSEECSS--SSCEESSHHHHHHHHGGGCCSSCCSCCC
T ss_pred CCCCCCCCCCCeECCC--CCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence 3667777777777777 7777777777777777777777777753
No 340
>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.80 E-value=1.2e-09 Score=87.16 Aligned_cols=41 Identities=24% Similarity=0.446 Sum_probs=38.2
Q ss_pred ccccCCCCCccCCCCCCCCCCchhhhccccccCCCCcccCC
Q psy8969 1128 VKKSTSSENNVCPECKKTFSSAHHMKVHLRIHSGIRPYKCP 1168 (1230)
Q Consensus 1128 ~~~~t~~kpy~C~~CgK~F~s~s~Lk~H~R~HTGEKPykCp 1168 (1230)
.+.|+++++|.|+.|+|.|.+.++|.+|+++|++++||+|+
T Consensus 4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~ 44 (45)
T 2epu_A 4 GSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS 44 (45)
T ss_dssp CCCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSC
T ss_pred CCCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCC
Confidence 34678899999999999999999999999999999999996
No 341
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.80 E-value=2.3e-09 Score=85.72 Aligned_cols=44 Identities=39% Similarity=0.637 Sum_probs=33.0
Q ss_pred hhhhcccCCCceecCCCccCccccChhhHHHHHhhccCCCCccccc
Q psy8969 811 VHIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQV 856 (1230)
Q Consensus 811 ~H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~~ 856 (1230)
.|+++|++++||.|.. |++.|...+.|..|+++|++++||.|.+
T Consensus 2 ~h~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~ 45 (46)
T 2enc_A 2 SSGSSGSGEKPFKCEE--CGKGFYTNSQCYSHQRSHSGEKPSGPSS 45 (46)
T ss_dssp CCSSCCCCCCSEECSS--SCCEESSHHHHHHHHHHSCCSSCCSSCC
T ss_pred CCCCCCCCCCCcCCCC--CCCcCCChHHHHHHHHHhCCCCCCCCCC
Confidence 3677777777777777 7777777777777777777777777764
No 342
>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.80 E-value=1.5e-09 Score=85.98 Aligned_cols=43 Identities=28% Similarity=0.409 Sum_probs=40.2
Q ss_pred hhhcccccCCCCEeecccccCccccchhhHHHHhhhccCcccccc
Q psy8969 1183 KAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTDEFQMSG 1227 (1230)
Q Consensus 1183 k~H~RtHTGEKPy~C~~e~CGKsF~~ks~LkrH~R~HtGE~~~s~ 1227 (1230)
.+|+++|++++||.|. +||+.|.++.+|.+|+++|++++.+.|
T Consensus 1 ~~H~~~H~~~~~~~C~--~C~k~F~~~~~L~~H~~~H~~~~~~~C 43 (44)
T 2eox_A 1 GSSGSSGTDSKSYNCN--ECGKAFTRIFHLTRHQKIHTRKSGPSS 43 (44)
T ss_dssp CCCCCCCCCCCCEEET--TTTEEESSSHHHHTTHHHHCCCCCCSC
T ss_pred CCCCcCCCCCCCeECc--ccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence 3699999999999994 799999999999999999999999876
No 343
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.79 E-value=1.5e-09 Score=86.77 Aligned_cols=43 Identities=42% Similarity=0.770 Sum_probs=24.4
Q ss_pred hhhhcccCCCceecCCCccCccccChhhHHHHHhhccCCCCcccc
Q psy8969 811 VHIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQ 855 (1230)
Q Consensus 811 ~H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~ 855 (1230)
+|+++|++++||.|+. ||+.|...+.|..|+++|++++||.|.
T Consensus 2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2ytg_A 2 SSGSSGTGEKPFKCGE--CGKSYNQRVHLTQHQRVHTGEKPSGPS 44 (46)
T ss_dssp CCCCCCSSCCSEECTT--TCCEESSSHHHHTTGGGGSSCCSSCSC
T ss_pred CCCCCCCCCCCeECCC--CCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence 3555555555555555 555555555555555555555555554
No 344
>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.78 E-value=2.3e-09 Score=85.70 Aligned_cols=44 Identities=36% Similarity=0.660 Sum_probs=32.5
Q ss_pred hhhhcccCCCceecCCCccCccccChhhHHHHHhhccCCCCccccc
Q psy8969 811 VHIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQV 856 (1230)
Q Consensus 811 ~H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~~ 856 (1230)
.|+++|++++||.|+. |++.|...+.|.+|+++|++++||.|..
T Consensus 2 ~H~~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~ 45 (46)
T 2ysp_A 2 SSGSSGTGEKPYKCEK--CGKGYNSKFNLDMHQKVHTGERPSGPSS 45 (46)
T ss_dssp CCCCCCSSCCSEEETT--TTEEESCHHHHHHHHTTSCSCCSSCCSC
T ss_pred CCCcCCCCCCCeECCC--CCCccCCHHHHHHHHHhhCCCCCCCCCC
Confidence 3677777777777777 7777777777777777777777777754
No 345
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.78 E-value=2.2e-09 Score=86.07 Aligned_cols=43 Identities=37% Similarity=0.715 Sum_probs=31.2
Q ss_pred hhhcccCCCceecCCCccCccccChhhHHHHHhhccCCCCccccc
Q psy8969 812 HIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQV 856 (1230)
Q Consensus 812 H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~~ 856 (1230)
|+++|++++||.|.. |++.|...+.|.+|+++|++++||.|.+
T Consensus 3 h~~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~ 45 (46)
T 2ytm_A 3 SGSSGTGEKPYKCME--CGKAFGDNSSCTQHQRLHTGQRPSGPSS 45 (46)
T ss_dssp SCCCCSSCCSSSBTT--TTBCCSSHHHHHHHHHHHHSCCCCCCCC
T ss_pred CCcCCCCCCCcCCCC--CCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence 666777777777776 7777777777777777777777777754
No 346
>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.78 E-value=2.6e-09 Score=85.41 Aligned_cols=44 Identities=23% Similarity=0.286 Sum_probs=34.3
Q ss_pred hhhhcccCCCceecCCCccCccccChhhHHHHHhhccCCCCccccc
Q psy8969 811 VHIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQV 856 (1230)
Q Consensus 811 ~H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~~ 856 (1230)
.|+++|++++||.|.. ||+.|...+.|..|+++|++++||+|..
T Consensus 2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2yso_A 2 SSGSSGSREKSHQCRE--CGEIFFQYVSLIEHQVLHMGQKNSGPSS 45 (46)
T ss_dssp CCSCCSSCCCCEECTT--TCCEESSHHHHHHHHHHHSCCSCCCTTC
T ss_pred CcccccCCCCCEEccc--cChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence 4677788888888877 8888888888888888888888887764
No 347
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Probab=98.78 E-value=2.9e-09 Score=83.25 Aligned_cols=41 Identities=37% Similarity=0.631 Sum_probs=38.7
Q ss_pred hcccccCCCCEeecccccCccccchhhHHHHhhhccCcccccc
Q psy8969 1185 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTDEFQMSG 1227 (1230)
Q Consensus 1185 H~RtHTGEKPy~C~~e~CGKsF~~ks~LkrH~R~HtGE~~~s~ 1227 (1230)
|+++|++++||.|. +||+.|.++.+|++|+++|++++.+.|
T Consensus 2 H~~~H~~~~~~~C~--~C~k~f~~~~~l~~H~~~H~~~k~~~C 42 (42)
T 2epc_A 2 SSGSSGGETPYLCG--QCGKSFTQRGSLAVHQRSCSQSGPSSG 42 (42)
T ss_dssp CCSCCCSSCCEECS--SSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred CCccCCCCCCeECC--CCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence 89999999999994 799999999999999999999998875
No 348
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=98.78 E-value=1.3e-09 Score=86.91 Aligned_cols=42 Identities=26% Similarity=0.450 Sum_probs=39.3
Q ss_pred ccCCCCCccCCCCCCCCCCchhhhccccccCCCCcccCCccccc
Q psy8969 1130 KSTSSENNVCPECKKTFSSAHHMKVHLRIHSGIRPYKCPVEYCE 1173 (1230)
Q Consensus 1130 ~~t~~kpy~C~~CgK~F~s~s~Lk~H~R~HTGEKPykCpve~Cg 1173 (1230)
.|+++++|.|+.|+|.|...++|.+|+++|++++||.|+ .||
T Consensus 4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~--~cg 45 (45)
T 2epq_A 4 GSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGP--SSG 45 (45)
T ss_dssp CCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCC--CCC
T ss_pred CcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCc--CCC
Confidence 567899999999999999999999999999999999996 486
No 349
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Probab=98.78 E-value=3.1e-09 Score=83.18 Aligned_cols=41 Identities=34% Similarity=0.644 Sum_probs=33.4
Q ss_pred hhhcccCCCceecCCCccCccccChhhHHHHHhhccCCCCccc
Q psy8969 812 HIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVC 854 (1230)
Q Consensus 812 H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C 854 (1230)
|+++|++++||+|.. |++.|...+.|..|+++|++++||.|
T Consensus 1 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C 41 (42)
T 2el5_A 1 GSSGSSGENPYECSE--CGKAFNRKDQLISHQRTHAGESGPSS 41 (42)
T ss_dssp CCSSSSSCCSEECSS--SCCEESSHHHHHHHHGGGCCCCSCCC
T ss_pred CCCCCCCCCCccCCC--cChhhCCHHHHHHHHHhcCCCCCCCC
Confidence 677788888888877 88888888888888888888888877
No 350
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A
Probab=98.77 E-value=2.8e-09 Score=85.37 Aligned_cols=44 Identities=43% Similarity=0.730 Sum_probs=38.3
Q ss_pred hhhhcccCCCceecCCCccCccccChhhHHHHHhhccCCCCccccc
Q psy8969 811 VHIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQV 856 (1230)
Q Consensus 811 ~H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~~ 856 (1230)
.|+++|++++||.|.. |++.|...+.|..|+++|++++||.|++
T Consensus 2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2emj_A 2 SSGSSGTGEKPFECAE--CGKSFSISSQLATHQRIHTGEKPSGPSS 45 (46)
T ss_dssp CCCCCCCCCCSEECSS--SSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred CCCCCCCCCCCEECCC--CCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence 5888899999999988 9999999999999999999999988863
No 351
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.77 E-value=1.9e-09 Score=86.22 Aligned_cols=43 Identities=33% Similarity=0.497 Sum_probs=40.2
Q ss_pred hhcccccCCCCEeecccccCccccchhhHHHHhhhccCccccccc
Q psy8969 1184 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTDEFQMSGL 1228 (1230)
Q Consensus 1184 ~H~RtHTGEKPy~C~~e~CGKsF~~ks~LkrH~R~HtGE~~~s~~ 1228 (1230)
+|+++|++++||.|. +||+.|.++.+|.+|+++|++++.+.|-
T Consensus 2 ~H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~~~~~C~ 44 (46)
T 2en3_A 2 SSGSSGTGEKPFQCK--ECGMNFSWSCSLFKHLRSHERTDPSGPS 44 (46)
T ss_dssp CCCCCSCCCCSEECS--SSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred ccccccCCCCCeeCc--ccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence 699999999999994 7999999999999999999999998773
No 352
>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.77 E-value=2.2e-09 Score=84.83 Aligned_cols=40 Identities=20% Similarity=0.262 Sum_probs=37.5
Q ss_pred cccCCCCCccCCCCCCCCCCchhhhccccccCCCCcccCC
Q psy8969 1129 KKSTSSENNVCPECKKTFSSAHHMKVHLRIHSGIRPYKCP 1168 (1230)
Q Consensus 1129 ~~~t~~kpy~C~~CgK~F~s~s~Lk~H~R~HTGEKPykCp 1168 (1230)
+.|+++++|.|+.|++.|.+.++|.+|+++|++++||+|+
T Consensus 3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~ 42 (43)
T 2yrm_A 3 SGSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSS 42 (43)
T ss_dssp SCCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSC
T ss_pred cCcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCC
Confidence 3577889999999999999999999999999999999995
No 353
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.77 E-value=2.7e-09 Score=85.23 Aligned_cols=44 Identities=41% Similarity=0.646 Sum_probs=38.4
Q ss_pred hhhhcccCCCceecCCCccCccccChhhHHHHHhhccCCCCccccc
Q psy8969 811 VHIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQV 856 (1230)
Q Consensus 811 ~H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~~ 856 (1230)
+|+++|++++||.|.. |++.|...+.|..|+++|++++||.|++
T Consensus 2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2eow_A 2 SSGSSGTGEKPYKCNE--CGKAFRARSSLAIHQATHSGEKPSGPSS 45 (46)
T ss_dssp CCCCCSCCCCCEECTT--SCCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred CccCCCCCCCCeeccc--cCChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence 5888899999999988 9999999999999999999999998863
No 354
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.77 E-value=2.9e-09 Score=85.27 Aligned_cols=43 Identities=42% Similarity=0.670 Sum_probs=37.1
Q ss_pred hhhhcccCCCceecCCCccCccccChhhHHHHHhhccCCCCcccc
Q psy8969 811 VHIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQ 855 (1230)
Q Consensus 811 ~H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~ 855 (1230)
+|+++|++++||+|.. |++.|...+.|..|+++|++++||.|+
T Consensus 2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2ytp_A 2 SSGSSGTGERHYECSE--CGKAFARKSTLIMHQRIHTGEKPSGPS 44 (46)
T ss_dssp CCCCSSCCCCCEECSS--SCCEESSHHHHHHHHTTTSCCCCCSSC
T ss_pred CcccCcCCCCCeECCc--CCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence 5788888888888888 888888888888888888888888886
No 355
>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.76 E-value=3.3e-09 Score=84.87 Aligned_cols=44 Identities=39% Similarity=0.714 Sum_probs=35.7
Q ss_pred hhhhcccCCCceecCCCccCccccChhhHHHHHhhccCCCCccccc
Q psy8969 811 VHIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQV 856 (1230)
Q Consensus 811 ~H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~~ 856 (1230)
.|+++|++++||.|.. |++.|...+.|..|+++|++++||.|++
T Consensus 2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2em2_A 2 SSGSSGSGEKPFKCKE--CGKAFRQNIHLASHLRIHTGEKPSGPSS 45 (46)
T ss_dssp CCCCSCCCCCSEECSS--SCCEESSHHHHHHHHHHHCCCCSSCSSC
T ss_pred CCCCCCCCCCCEECCc--CCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence 3777888888888877 8888888888888888888888888864
No 356
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.76 E-value=2.9e-09 Score=85.20 Aligned_cols=43 Identities=35% Similarity=0.584 Sum_probs=33.6
Q ss_pred hhhcccCCCceecCCCccCccccChhhHHHHHhhccCCCCccccc
Q psy8969 812 HIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQV 856 (1230)
Q Consensus 812 H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~~ 856 (1230)
|+++|++++||.|.. |++.|...+.|.+|+++|++++||.|..
T Consensus 3 h~~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~ 45 (46)
T 2em8_A 3 SGSSGSGEKPYKCVE--CGKGYKRRLDLDFHQRVHTGEKLSGPSS 45 (46)
T ss_dssp CCCCCCSCCSEECSS--SCCEESSHHHHHHHHHHHHCCCCCCSCC
T ss_pred CCCCCCCCCCeECcc--cCchhCCHHHHHHHHHHHcCCCCCCCCC
Confidence 677778888888877 8888888888888888888888887764
No 357
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.76 E-value=2.9e-09 Score=85.17 Aligned_cols=43 Identities=42% Similarity=0.695 Sum_probs=35.6
Q ss_pred hhhhcccCCCceecCCCccCccccChhhHHHHHhhccCCCCcccc
Q psy8969 811 VHIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQ 855 (1230)
Q Consensus 811 ~H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~ 855 (1230)
+|+++|++++||+|.. |++.|...+.|.+|+++|++++||.|+
T Consensus 2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2enf_A 2 SSGSSGTGEKPYKCNE--CGKVFTQNSHLVRHRGIHTGEKPSGPS 44 (46)
T ss_dssp CCCCCCCCCCSCBCSS--SCCBCSSHHHHHHHHTTTTTSSCCCCS
T ss_pred CCCcCCCCCcCeECCC--CCcccCCHHHHHHHHHhhCCCCCCCCC
Confidence 4778888888888887 888888888888888888888888885
No 358
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.76 E-value=3.1e-09 Score=85.03 Aligned_cols=44 Identities=36% Similarity=0.610 Sum_probs=38.6
Q ss_pred hhhhcccCCCceecCCCccCccccChhhHHHHHhhccCCCCccccc
Q psy8969 811 VHIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQV 856 (1230)
Q Consensus 811 ~H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~~ 856 (1230)
.|+++|++++||+|.. |++.|...+.|..|+++|++++||.|++
T Consensus 2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2em4_A 2 SSGSSGTGQRPYECIE--CGKAFKTKSSLICHRRSHTGEKPSGPSS 45 (46)
T ss_dssp CSCCCCCCSSSEECSS--SCCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred CCccccCCCcCcCCCC--CCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence 4888899999999988 9999999999999999999999998863
No 359
>1u0j_A DNA replication protein; AAA+ protein, P-loop atpases, helicase; HET: DNA ADP; 2.10A {Adeno-associated virus - 2} SCOP: c.37.1.20 PDB: 1s9h_A
Probab=98.76 E-value=2.9e-08 Score=109.94 Aligned_cols=170 Identities=18% Similarity=0.234 Sum_probs=99.5
Q ss_pred HHHhhcCCCCCcccccccHHHHhhhhcccccChHHHHHHHHHHHHHhhhcCC-CCCceEEEeCCCCCCchHHHHHHHHHh
Q psy8969 327 LDWLTSLPWGIQSEENLDLTQAAKILDDDHYGMEDVKKRILEFIAVSQLKGT-TQGKILCFYGPPGVGKTSIAKSIARAL 405 (1230)
Q Consensus 327 l~~~~~lpw~~~~~~~~~~~~~~~~l~~d~~G~~~vK~~i~e~l~~~~~~~~-~~~~~llL~GPPG~GKTslak~iA~~l 405 (1230)
.+||..- . ..+..+-....+.|.-..|....++..+..|+ .+. .+...|+|+||||||||++|++||+.+
T Consensus 58 ~~~i~~~--~--~~~~~~~n~i~~~l~~qg~~~~~~~~~l~~~l-----~~~~~~~n~~~l~GppgtGKt~~a~ala~~~ 128 (267)
T 1u0j_A 58 PDYLVGQ--Q--PVEDISSNRIYKILELNGYDPQYAASVFLGWA-----TKKFGKRNTIWLFGPATTGKTNIAEAIAHTV 128 (267)
T ss_dssp HHHHSCS--S--CCSCGGGCHHHHHHHHTTCCHHHHHHHHHHHH-----TTCSTTCCEEEEECSTTSSHHHHHHHHHHHS
T ss_pred HHHhccc--C--CCCCCchHHHHHHHHHcCCCHHHHHHHHHHHH-----hCCCCCCcEEEEECCCCCCHHHHHHHHHhhh
Confidence 4566642 2 22246777788888777777777777666665 333 334579999999999999999999987
Q ss_pred CCCeEEEecCCcchhHHHhhccccccccCchhHHHHHHhhcC-CCCEEEEecccccCCCCCCChhhHHHhhcChhhhhhh
Q psy8969 406 NREYFRFSVGGMSDVAEIKGHRRTYVGAMPGKVIQCMKKTKT-ENPLVLIDEVDKIGKGYSGDPASALLEMLDPEQNANF 484 (1230)
Q Consensus 406 ~~~~~~~~~~~~~d~~~i~g~~~~~~g~~~g~i~~~~~~~~~-~~pvillDEIDk~~~~~~~~~~~all~~ld~~q~~~f 484 (1230)
+. +-.++... ..... ... ..-|+++||..-. .+...++-.+++... .-
T Consensus 129 ~l-~G~vn~~~-----------~~f~l------------~~~~~k~i~l~Ee~~~~-----~d~~~~lr~i~~G~~--~~ 177 (267)
T 1u0j_A 129 PF-YGCVNWTN-----------ENFPF------------NDCVDKMVIWWEEGKMT-----AKVVESAKAILGGSK--VR 177 (267)
T ss_dssp SC-EEECCTTC-----------SSCTT------------GGGSSCSEEEECSCCEE-----TTTHHHHHHHHTTCC--EE
T ss_pred cc-cceeeccc-----------ccccc------------ccccccEEEEeccccch-----hHHHHHHHHHhCCCc--EE
Confidence 54 22222211 01111 111 1235666665543 233445555554211 01
Q ss_pred hhhccCccccCCceEEEEecCC----------C-CCCCHhhhcccceeecC--------CCCHHHHHHHHH
Q psy8969 485 LDHYLDVPVDLSRVLFICTANV----------I-DTIPEPLRDRMEMIDVS--------GYVAEEKVAIAA 536 (1230)
Q Consensus 485 ~d~~~~~~~d~s~v~~I~TaN~----------~-~~I~~~L~~R~~~i~~~--------~~~~~e~~~i~~ 536 (1230)
+|.-..-+....+..+|+|||. . +...++|+||+.+|.+. ..+.++-...+.
T Consensus 178 id~K~k~~~~v~~tPvIitsN~~i~~~~~g~~~s~~~~~~L~sR~~~f~F~~~~p~~~~~lt~~~~~~f~~ 248 (267)
T 1u0j_A 178 VDQKCKSSAQIDPTPVIVTSNTNMCAVIDGNSTTFEHQQPLQDRMFKFELTRRLDHDFGKVTKQEVKDFFR 248 (267)
T ss_dssp C------CCEECCCCEEEEESSCTTCEEETTEEECTTHHHHHTTEEEEECCSCCCTTSCCCCHHHHHHHHH
T ss_pred EecCcCCcccccCCCEEEEecCCcccccccCccchhhhHHHhhhEEEEECCCcCCcccCCCCHHHHHHHHH
Confidence 1111111234456778888997 1 36779999999999998 566666655554
No 360
>1tue_A Replication protein E1; helicase, replication, E1E2 complex, AAA+ protein; 2.10A {Human papillomavirus type 18} SCOP: c.37.1.20
Probab=98.76 E-value=1.5e-08 Score=107.55 Aligned_cols=115 Identities=19% Similarity=0.300 Sum_probs=66.4
Q ss_pred CCCCCceEEEeCCCCCCchHHHHHHHHHhCCCeEEEecCCcchhHHHhhccccccccCchhHHHHHHhhcCCCCEEEEec
Q psy8969 377 GTTQGKILCFYGPPGVGKTSIAKSIARALNREYFRFSVGGMSDVAEIKGHRRTYVGAMPGKVIQCMKKTKTENPLVLIDE 456 (1230)
Q Consensus 377 ~~~~~~~llL~GPPG~GKTslak~iA~~l~~~~~~~~~~~~~d~~~i~g~~~~~~g~~~g~i~~~~~~~~~~~pvillDE 456 (1230)
+.++...+||+||||||||++|.+||+.++...+.+ ..... ..|... -...+||+|||
T Consensus 54 ~iPkkn~ili~GPPGtGKTt~a~ala~~l~g~i~~f--ans~s--------~f~l~~------------l~~~kIiiLDE 111 (212)
T 1tue_A 54 GTPKKNCLVFCGPANTGKSYFGMSFIHFIQGAVISF--VNSTS--------HFWLEP------------LTDTKVAMLDD 111 (212)
T ss_dssp TCTTCSEEEEESCGGGCHHHHHHHHHHHHTCEECCC--CCSSS--------CGGGGG------------GTTCSSEEEEE
T ss_pred cCCcccEEEEECCCCCCHHHHHHHHHHHhCCCeeeE--Eeccc--------hhhhcc------------cCCCCEEEEEC
Confidence 444455799999999999999999999986543211 11000 011111 01245899999
Q ss_pred ccccCCCCCCChhhHHHhhcChhhhhhhhhhccCccccC--------CceEEEEecCC---CCCCCHhhhcccceeecCC
Q psy8969 457 VDKIGKGYSGDPASALLEMLDPEQNANFLDHYLDVPVDL--------SRVLFICTANV---IDTIPEPLRDRMEMIDVSG 525 (1230)
Q Consensus 457 IDk~~~~~~~~~~~all~~ld~~q~~~f~d~~~~~~~d~--------s~v~~I~TaN~---~~~I~~~L~~R~~~i~~~~ 525 (1230)
+|.. ..+.+|. ...+.+|.+ .+.+|. ....+|.|||. .+..-++|.||+.++.++.
T Consensus 112 ad~~-----------~~~~~d~-~lrn~ldG~-~~~iD~Khr~~~~~~~~PlIITtN~~~~~~~~~~~L~SRi~~f~F~~ 178 (212)
T 1tue_A 112 ATTT-----------CWTYFDT-YMRNALDGN-PISIDRKHKPLIQLKCPPILLTTNIHPAKDNRWPYLESRITVFEFPN 178 (212)
T ss_dssp ECHH-----------HHHHHHH-HCHHHHHTC-CEEEC----CCEEECCCCEEEEESSCTTSSSSCHHHHTSCEEEECCS
T ss_pred CCch-----------hHHHHHH-HHHHHhCCC-cccHHHhhcCccccCCCCEEEecCCCcccccchhhhhhhEEEEEcCC
Confidence 9842 1111111 111222222 111222 23467888997 4556689999999998875
Q ss_pred C
Q psy8969 526 Y 526 (1230)
Q Consensus 526 ~ 526 (1230)
.
T Consensus 179 ~ 179 (212)
T 1tue_A 179 A 179 (212)
T ss_dssp C
T ss_pred C
Confidence 4
No 361
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.76 E-value=3.2e-09 Score=84.88 Aligned_cols=43 Identities=37% Similarity=0.662 Sum_probs=38.0
Q ss_pred hhhhcccCCCceecCCCccCccccChhhHHHHHhhccCCCCcccc
Q psy8969 811 VHIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQ 855 (1230)
Q Consensus 811 ~H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~ 855 (1230)
+|+++|++++||.|.. |++.|...+.|.+|+++|++++||.|+
T Consensus 2 ~H~~~H~~~~~~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~C~ 44 (46)
T 2em3_A 2 SSGSSGTGEKPYECKV--CSKAFTQKAHLAQHQKTHTGEKPSGPS 44 (46)
T ss_dssp CCCCCCSSCCSEECSS--SCCEESSHHHHHHHHHHHCCCCCCCSC
T ss_pred CCCCCCCCCcCeECCC--CCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence 5888899999999988 999999999999999999999999886
No 362
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.76 E-value=3.3e-09 Score=84.73 Aligned_cols=43 Identities=42% Similarity=0.724 Sum_probs=35.5
Q ss_pred hhhhcccCCCceecCCCccCccccChhhHHHHHhhccCCCCcccc
Q psy8969 811 VHIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQ 855 (1230)
Q Consensus 811 ~H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~ 855 (1230)
+|+++|++++||.|.. |++.|...+.|..|+++|++++||.|+
T Consensus 2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2ep1_A 2 SSGSSGTGEKPYECSD--CGKSFIKKSQLHVHQRIHTGENPSGPS 44 (46)
T ss_dssp CCCCCCSSCCSSCCSS--SCCCCSSHHHHHHHHGGGSSSCCCSSS
T ss_pred ccccCCCCCCCcCCCC--CCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence 5778888888888877 888888888888888888888888885
No 363
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.75 E-value=3.5e-09 Score=84.76 Aligned_cols=43 Identities=37% Similarity=0.729 Sum_probs=35.2
Q ss_pred hhhhcccCCCceecCCCccCccccChhhHHHHHhhccCCCCcccc
Q psy8969 811 VHIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQ 855 (1230)
Q Consensus 811 ~H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~ 855 (1230)
+|+++|++++||.|.. |++.|...+.|..|+++|++++||.|+
T Consensus 2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2yth_A 2 SSGSSGSGEKPFQCEE--CGKRFTQNSHLHSHQRVHTGEKPSGPS 44 (46)
T ss_dssp CCCSCCCCSSSBCCSS--SCCCBSSHHHHHHHGGGGTTCCCSSCC
T ss_pred CcccCCCCCcCCCCCC--CCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence 5778888888888877 888888888888888888888888875
No 364
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.75 E-value=3.1e-09 Score=84.94 Aligned_cols=43 Identities=40% Similarity=0.739 Sum_probs=34.3
Q ss_pred hhhhcccCCCceecCCCccCccccChhhHHHHHhhccCCCCcccc
Q psy8969 811 VHIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQ 855 (1230)
Q Consensus 811 ~H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~ 855 (1230)
+|+++|++++||.|.. |++.|...+.|..|+++|++++||.|+
T Consensus 2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2eq2_A 2 SSGSSGTGGKPYQCNE--CGKAFSQTSKLARHQRVHTGEKPSGPS 44 (46)
T ss_dssp CCCCSSSSSCSSSCCS--SCCCCSSHHHHHHHGGGGCCCCCCCCC
T ss_pred CcccccCCCCCeECCC--CCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence 4777888888888877 888888888888888888888888775
No 365
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.75 E-value=3.4e-09 Score=84.66 Aligned_cols=43 Identities=47% Similarity=0.808 Sum_probs=36.0
Q ss_pred hhhhcccCCCceecCCCccCccccChhhHHHHHhhccCCCCcccc
Q psy8969 811 VHIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQ 855 (1230)
Q Consensus 811 ~H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~ 855 (1230)
+|+++|++++||.|.. |++.|...+.|..|+++|++++||.|.
T Consensus 2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~p~~C~ 44 (46)
T 2yts_A 2 SSGSSGTGEKPYICNE--CGKSFIQKSHLNRHRRIHTGEKPSGPS 44 (46)
T ss_dssp CCSCCCCSCCSEECSS--SCCEESSHHHHHHHGGGTSSCCSSCCC
T ss_pred CCCCCCCCCcCEECCC--CChhhCChHHHHHHHHhcCCCCCcCCC
Confidence 5788888888888888 888888888888888888888888885
No 366
>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=98.75 E-value=1e-09 Score=94.37 Aligned_cols=57 Identities=16% Similarity=0.356 Sum_probs=41.1
Q ss_pred HHhhhhcccCCCceecCCCccCccccChhhHHHHHhhccCCCCccccccccccccCCchhHhhh
Q psy8969 809 RKVHIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKH 872 (1230)
Q Consensus 809 L~~H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~~~~C~k~F~~~~~L~~H 872 (1230)
|..|+++|++++||.|+. ||+.|...+.|. ++|++++||.|.. |++.|....++..|
T Consensus 2 L~~h~~~H~~~k~~~C~~--C~k~F~~~~~l~---~~H~~~k~~~C~~--C~k~f~~~~~~~~~ 58 (62)
T 1vd4_A 2 IETDERDSTNRASFKCPV--CSSTFTDLEANQ---LFDPMTGTFRCTF--CHTEVEEDESAMPK 58 (62)
T ss_dssp CCCCSSSCCSSSEEECSS--SCCEEEHHHHHH---HEETTTTEEBCSS--SCCBCEECTTCSCC
T ss_pred hhhHHHHcCCCCCccCCC--CCchhccHHHhH---hhcCCCCCEECCC--CCCccccCcccccc
Confidence 456777788888888877 788777777665 6777777777764 77777776665443
No 367
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.75 E-value=3.2e-09 Score=84.93 Aligned_cols=43 Identities=42% Similarity=0.705 Sum_probs=34.9
Q ss_pred hhhhcccCCCceecCCCccCccccChhhHHHHHhhccCCCCcccc
Q psy8969 811 VHIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQ 855 (1230)
Q Consensus 811 ~H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~ 855 (1230)
+|+++|++++||.|.. |++.|...+.|..|+++|++++||.|+
T Consensus 2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2yti_A 2 SSGSSGTGEKPYKCNE--CGKVFTQNSHLARHRGIHTGEKPSGPS 44 (46)
T ss_dssp CCCCCCSCCCTTCCSS--SCCCCSSHHHHHHHHTTTSCSCCSSTT
T ss_pred CCCcCCCCCcCeECCC--CCcccCChhHHHHHhHhcCCCCCCCCC
Confidence 4777888888888877 888888888888888888888888875
No 368
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.75 E-value=2.8e-09 Score=83.00 Aligned_cols=39 Identities=31% Similarity=0.555 Sum_probs=36.8
Q ss_pred cccCCCCCccCCCCCCCCCCchhhhccccccCCCCcccC
Q psy8969 1129 KKSTSSENNVCPECKKTFSSAHHMKVHLRIHSGIRPYKC 1167 (1230)
Q Consensus 1129 ~~~t~~kpy~C~~CgK~F~s~s~Lk~H~R~HTGEKPykC 1167 (1230)
+.|+++++|.|+.|++.|.+.++|.+|+++|++++||+|
T Consensus 3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C 41 (41)
T 2ept_A 3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG 41 (41)
T ss_dssp SSCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred CccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence 356789999999999999999999999999999999998
No 369
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.75 E-value=3.8e-09 Score=83.63 Aligned_cols=43 Identities=23% Similarity=0.482 Sum_probs=35.8
Q ss_pred hhhhcccCCCceecCCCccCccccChhhHHHHHhhccCCCCcccc
Q psy8969 811 VHIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQ 855 (1230)
Q Consensus 811 ~H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~ 855 (1230)
+|+++|++++||.|.. |++.|...+.|..|+++|++++||.|.
T Consensus 2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~ 44 (44)
T 2yu5_A 2 SSGSSGAGENPFKCSK--CDRVFTQRNYLVQHERTHARKSGPSSG 44 (44)
T ss_dssp CCSCCCSCCCSEECSS--SSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred CCccccCCCCCeECCC--CCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence 5788888888888888 888888888888888888888888873
No 370
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.75 E-value=3.6e-09 Score=84.52 Aligned_cols=43 Identities=42% Similarity=0.709 Sum_probs=36.8
Q ss_pred hhhhcccCCCceecCCCccCccccChhhHHHHHhhccCCCCcccc
Q psy8969 811 VHIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQ 855 (1230)
Q Consensus 811 ~H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~ 855 (1230)
+|+++|++++||.|.. |++.|...+.|..|+++|++++||.|+
T Consensus 2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2ytf_A 2 SSGSSGTGEKPFECSE--CQKAFNTKSNLIVHQRTHTGEKPSGPS 44 (46)
T ss_dssp CCCCSSCCCCSEECSS--SCCEESSHHHHHHHHHTSCSSSSSCCC
T ss_pred CCCCCCCCCCCcCCCC--CCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence 4788888888888888 888888888888888888888888886
No 371
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.74 E-value=3.8e-09 Score=83.45 Aligned_cols=43 Identities=40% Similarity=0.664 Sum_probs=36.7
Q ss_pred hhhhcccCCCceecCCCccCccccChhhHHHHHhhccCCCCcccc
Q psy8969 811 VHIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQ 855 (1230)
Q Consensus 811 ~H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~ 855 (1230)
+|+++|++++||+|.. |++.|...+.|..|+++|++++||.|+
T Consensus 2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~ 44 (44)
T 2eof_A 2 SSGSSGTGEKPYECNE--CQKAFNTKSNLMVHQRTHTGESGPSSG 44 (44)
T ss_dssp CCSSCCSCCCSEECTT--TCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred CCccCCCCCCCeECCC--CCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence 5788888888888888 888888888888888888888888873
No 372
>2kjq_A DNAA-related protein; solution structure, NESG, structural genomics, PSI-2, protei structure initiative; NMR {Neisseria meningitidis serogroup B}
Probab=98.74 E-value=2.3e-08 Score=101.69 Aligned_cols=101 Identities=17% Similarity=0.359 Sum_probs=64.8
Q ss_pred CCceEEEeCCCCCCchHHHHHHHHHh---CCCeEEEecCCcchhHHHhhccccccccCchhHHHHHHhhcCCCCEEEEec
Q psy8969 380 QGKILCFYGPPGVGKTSIAKSIARAL---NREYFRFSVGGMSDVAEIKGHRRTYVGAMPGKVIQCMKKTKTENPLVLIDE 456 (1230)
Q Consensus 380 ~~~~llL~GPPG~GKTslak~iA~~l---~~~~~~~~~~~~~d~~~i~g~~~~~~g~~~g~i~~~~~~~~~~~pvillDE 456 (1230)
.+.+++|+||+|+|||+|+++|+..+ |...+.++...+... . + ....+|++|||
T Consensus 35 ~g~~~~l~G~~G~GKTtL~~~i~~~~~~~g~~~~~~~~~~~~~~----------------~----~---~~~~~lLilDE 91 (149)
T 2kjq_A 35 HGQFIYVWGEEGAGKSHLLQAWVAQALEAGKNAAYIDAASMPLT----------------D----A---AFEAEYLAVDQ 91 (149)
T ss_dssp CCSEEEEESSSTTTTCHHHHHHHHHHHTTTCCEEEEETTTSCCC----------------G----G---GGGCSEEEEES
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHHhcCCcEEEEcHHHhhHH----------------H----H---HhCCCEEEEeC
Confidence 67899999999999999999999988 666666665443321 0 0 12357999999
Q ss_pred ccccCCCCCCChhhHHHhhcChhhhhhhhhhccCccccCCceEEEEecC-CCCCCC--Hhhhcccce
Q psy8969 457 VDKIGKGYSGDPASALLEMLDPEQNANFLDHYLDVPVDLSRVLFICTAN-VIDTIP--EPLRDRMEM 520 (1230)
Q Consensus 457 IDk~~~~~~~~~~~all~~ld~~q~~~f~d~~~~~~~d~s~v~~I~TaN-~~~~I~--~~L~~R~~~ 520 (1230)
++.+.. .....|+++++... +....++|+|+| .+..+. +.|++|+..
T Consensus 92 ~~~~~~----~~~~~l~~li~~~~-------------~~g~~~iiits~~~p~~l~~~~~L~SRl~~ 141 (149)
T 2kjq_A 92 VEKLGN----EEQALLFSIFNRFR-------------NSGKGFLLLGSEYTPQQLVIREDLRTRMAY 141 (149)
T ss_dssp TTCCCS----HHHHHHHHHHHHHH-------------HHTCCEEEEEESSCTTTSSCCHHHHHHGGG
T ss_pred ccccCh----HHHHHHHHHHHHHH-------------HcCCcEEEEECCCCHHHccccHHHHHHHhc
Confidence 987532 12455566554321 112222444566 444332 999999863
No 373
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.74 E-value=3.8e-09 Score=84.36 Aligned_cols=43 Identities=51% Similarity=0.849 Sum_probs=36.7
Q ss_pred hhhhcccCCCceecCCCccCccccChhhHHHHHhhccCCCCcccc
Q psy8969 811 VHIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQ 855 (1230)
Q Consensus 811 ~H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~ 855 (1230)
+|+++|++++||.|.. |++.|...+.|..|+++|++++||.|+
T Consensus 2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2yrj_A 2 SSGSSGTGEKPYRCGE--CGKAFAQKANLTQHQRIHTGEKPSGPS 44 (46)
T ss_dssp CCCCCCCCCCCEECSS--SCCEESSHHHHHHHHTTTSSCCSSCSC
T ss_pred CCccCCCCCCCeECCC--CCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence 5788888888888888 888888888888888888888888886
No 374
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.74 E-value=3.6e-09 Score=84.68 Aligned_cols=43 Identities=33% Similarity=0.597 Sum_probs=38.1
Q ss_pred hhhhcccCCCceecCCCccCccccChhhHHHHHhhccCCCCcccc
Q psy8969 811 VHIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQ 855 (1230)
Q Consensus 811 ~H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~ 855 (1230)
+|+++|++++||+|.. |++.|...+.|..|+++|++++||.|+
T Consensus 2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2yto_A 2 SSGSSGTGEKPYKCSD--CGKAFTRKSGLHIHQQSHTGERHSGPS 44 (46)
T ss_dssp CCCCCCCSCCCEECSS--SCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred CcccccCCCCCEECcc--cCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence 5888899999999988 999999999999999999999999885
No 375
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.74 E-value=4.1e-09 Score=82.38 Aligned_cols=41 Identities=27% Similarity=0.595 Sum_probs=32.3
Q ss_pred hhhcccCCCceecCCCccCccccChhhHHHHHhhccCCCCccc
Q psy8969 812 HIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVC 854 (1230)
Q Consensus 812 H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C 854 (1230)
|+++|++++||.|.. |++.|...+.|.+|+++|++++||.|
T Consensus 1 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C 41 (42)
T 2yte_A 1 GSSGSSGEKPYSCAE--CKETFSDNNRLVQHQKMHTVKSGPSS 41 (42)
T ss_dssp CCSSSCSCCSCBCTT--TCCBCSSHHHHHHHHHHTSCCSSCCC
T ss_pred CCcCcCCCCCeECCC--CCCccCCHHHHHHHHHHhCCCCCCCC
Confidence 667777888888877 88888888888888888888887776
No 376
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.74 E-value=4.1e-09 Score=84.27 Aligned_cols=43 Identities=40% Similarity=0.719 Sum_probs=35.0
Q ss_pred hhhhcccCCCceecCCCccCccccChhhHHHHHhhccCCCCcccc
Q psy8969 811 VHIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQ 855 (1230)
Q Consensus 811 ~H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~ 855 (1230)
.|+++|++++||.|.. |++.|...+.|..|+++|++++||.|+
T Consensus 2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~ 44 (46)
T 2emg_A 2 SSGSSGTGENPFICSE--CGKVFTHKTNLIIHQKIHTGERPSGPS 44 (46)
T ss_dssp CCCCCCCSCCSCBCTT--TCCBCSSHHHHHHHHTTTSCCCCSCSC
T ss_pred CCCCCCCCCCCEECCc--cCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence 4777888888888877 888888888888888888888888875
No 377
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.74 E-value=3.4e-09 Score=83.75 Aligned_cols=42 Identities=40% Similarity=0.634 Sum_probs=33.4
Q ss_pred hhhhcccCCCceecCCCccCccccChhhHHHHHhhccCCCCccc
Q psy8969 811 VHIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVC 854 (1230)
Q Consensus 811 ~H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C 854 (1230)
+|+++|++++||.|.. ||+.|...+.|..|+++|++++||.|
T Consensus 2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C 43 (44)
T 2en7_A 2 SSGSSGTGMKPYVCNE--CGKAFRSKSYLIIHTRTHTGESGPSS 43 (44)
T ss_dssp CSCCCSSSSSSSCCTT--TCCCCSSHHHHHHHHTTTCCSSSSCC
T ss_pred CCCcCCCCCcCeECCC--CCCccCCHHHHHHHhhhcCCCCCCCC
Confidence 4777788888888877 88888888888888888888888777
No 378
>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.74 E-value=3.8e-09 Score=84.34 Aligned_cols=44 Identities=43% Similarity=0.734 Sum_probs=38.4
Q ss_pred hhhhcccCCCceecCCCccCccccChhhHHHHHhhccCCCCccccc
Q psy8969 811 VHIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQV 856 (1230)
Q Consensus 811 ~H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~~ 856 (1230)
.|+++|++++||.|.. |++.|...+.|..|+++|++++||.|++
T Consensus 2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~kp~~C~~ 45 (46)
T 2eor_A 2 SSGSSGTGEKPYNCEE--CGKAFIHDSQLQEHQRIHTGEKPSGPSS 45 (46)
T ss_dssp CSSSSSSCCCSEECTT--TCCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred CCCcCcCCCcCccCCC--CCCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence 4888899999999988 9999999999999999999999998863
No 379
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.74 E-value=3.7e-09 Score=84.61 Aligned_cols=44 Identities=34% Similarity=0.617 Sum_probs=37.4
Q ss_pred hhhhcccCCCceecCCCccCccccChhhHHHHHhhccCCCCccccc
Q psy8969 811 VHIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQV 856 (1230)
Q Consensus 811 ~H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~~ 856 (1230)
+|+++|++++||.|.. |++.|...+.|..|+++|++++||.|++
T Consensus 2 ~h~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2en9_A 2 SSGSSGAGKKLFKCNE--CKKTFTQSSSLTVHQRIHTGEKPSGPSS 45 (46)
T ss_dssp CCCSSCCSSCCCBCTT--TCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred CCCCCCCCCCCEECCc--cCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence 4788888888888888 8888888888888888888888888863
No 380
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.74 E-value=4.3e-09 Score=84.35 Aligned_cols=43 Identities=42% Similarity=0.658 Sum_probs=28.7
Q ss_pred hhhcccCCCceecCCCccCccccChhhHHHHHh-hccCCCCccccc
Q psy8969 812 HIRTHTGEKPYVCGEAGCDKSFASATNYKNHMR-IHSGEKPYVCQV 856 (1230)
Q Consensus 812 H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r-~Htgekpy~C~~ 856 (1230)
|+++|++++||.|.. ||+.|...+.|..|++ +|++++||.|..
T Consensus 3 H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~~H~~~k~~~C~~ 46 (47)
T 2epx_A 3 SGSSGTGKKPYECIE--CGKAFIQNTSLIRHWRYYHTGEKPSGPSS 46 (47)
T ss_dssp CCCCCCCCCSBCCSS--SCCCBSSHHHHHHHHTTTTTTSCSSSCCC
T ss_pred cccccCCCCCEECCc--cCchhCChHHHHHHhHhhcCCCCCCCCCC
Confidence 666666666666666 6666666666666666 666666666653
No 381
>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.74 E-value=3.8e-09 Score=83.60 Aligned_cols=43 Identities=16% Similarity=0.322 Sum_probs=35.8
Q ss_pred hhhhcccCCCceecCCCccCccccChhhHHHHHhhccCCCCcccc
Q psy8969 811 VHIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQ 855 (1230)
Q Consensus 811 ~H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~ 855 (1230)
+|+++|++++||.|.. |++.|...+.|..|+++|++++||.|+
T Consensus 2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~ 44 (44)
T 2emb_A 2 SSGSSGHTRKRYECSK--CQATFNLRKHLIQHQKTHAAKSGPSSG 44 (44)
T ss_dssp CCCSCCCCCSSEECTT--TCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred CcccccCCCCCeECCC--CCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence 5788888888888887 888888888888888888888888873
No 382
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.73 E-value=4e-09 Score=84.40 Aligned_cols=43 Identities=35% Similarity=0.636 Sum_probs=34.8
Q ss_pred hhhhcccCCCceecCCCccCccccChhhHHHHHhhccCCCCcccc
Q psy8969 811 VHIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQ 855 (1230)
Q Consensus 811 ~H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~ 855 (1230)
+|+++|++++||+|.. |++.|...+.|.+|+++|++++||.|+
T Consensus 2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2em6_A 2 SSGSSGMGEKCYKCDV--CGKEFSQSSHLQTHQRVHTGEKPSGPS 44 (46)
T ss_dssp CCCSCCCCCCCCBCSS--SCCBCSSHHHHHHHHTTTSSSCCCCTT
T ss_pred CCccccCCCCCeECCC--CCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence 4777888888888877 888888888888888888888888875
No 383
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.73 E-value=2.8e-09 Score=83.28 Aligned_cols=41 Identities=34% Similarity=0.722 Sum_probs=27.3
Q ss_pred hhhcccCCCceecCCCccCccccChhhHHHHHhhccCCCCccc
Q psy8969 812 HIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVC 854 (1230)
Q Consensus 812 H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C 854 (1230)
|+++|++++||.|.. ||+.|...+.|..|+++|++++||.|
T Consensus 2 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C 42 (42)
T 2ytb_A 2 SSGSSGGEKPYRCDQ--CGKAFSQKGSLIVHIRVHTGSGPSSG 42 (42)
T ss_dssp CCCCCCSCCSBCCTT--TTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred CccccCCCCCeeCCC--ccchhCCHHHHHHHHHHhCCCCCCCC
Confidence 566666666666666 66666666666666666666666665
No 384
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.73 E-value=5.2e-09 Score=83.63 Aligned_cols=43 Identities=40% Similarity=0.652 Sum_probs=36.7
Q ss_pred hhhhcccCCCceecCCCccCccccChhhHHHHHhhccCCCCcccc
Q psy8969 811 VHIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQ 855 (1230)
Q Consensus 811 ~H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~ 855 (1230)
.|+++|+++++|.|.. |++.|...+.|..|+++|++++||.|+
T Consensus 2 ~H~~~H~~~~~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2emi_A 2 SSGSSGTGERHYECSE--CGKAFIQKSTLSMHQRIHRGEKPSGPS 44 (46)
T ss_dssp CCCCSCSSCCCEECSS--SCCEESSHHHHHHHHGGGCSCCCCSCC
T ss_pred CCCcccCCCCCCCCCC--CCcccCCHHHHHHHHhHhCCCCCCCCC
Confidence 4788888888888888 888888888888888888888888886
No 385
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.72 E-value=4.7e-09 Score=83.98 Aligned_cols=43 Identities=33% Similarity=0.639 Sum_probs=35.2
Q ss_pred hhhhcccCCCceecCCCccCccccChhhHHHHHhhccCCCCcccc
Q psy8969 811 VHIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQ 855 (1230)
Q Consensus 811 ~H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~ 855 (1230)
.|+++|++++||+|.. |++.|...+.|.+|+++|++++||.|+
T Consensus 2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2eoh_A 2 SSGSSGSGKKPYECKE--CRKTFIQIGHLNQHKRVHTGERSSGPS 44 (46)
T ss_dssp CCCCSCCCSCSCCCSS--SCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred CCCCCcCCCCCcCCCC--cCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence 3777888888888887 888888888888888888888888875
No 386
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.72 E-value=4.2e-09 Score=84.19 Aligned_cols=43 Identities=44% Similarity=0.738 Sum_probs=35.2
Q ss_pred hhhhcccCCCceecCCCccCccccChhhHHHHHhhccCCCCcccc
Q psy8969 811 VHIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQ 855 (1230)
Q Consensus 811 ~H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~ 855 (1230)
+|+++|++++||.|.. |++.|...+.|..|+++|++++||.|+
T Consensus 2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2eq1_A 2 SSGSSGTGEKPYKCNE--CGKAFRAHSNLTTHQVIHTGEKPSGPS 44 (46)
T ss_dssp CCCCCCCCSCCCCCTT--TTCCCSSHHHHHHHHTTTCCSCCSSCC
T ss_pred CcccccCCCCCeECCc--CChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence 4778888888888877 888888888888888888888888875
No 387
>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.72 E-value=4.6e-09 Score=83.04 Aligned_cols=43 Identities=33% Similarity=0.563 Sum_probs=34.0
Q ss_pred hhhhcccCCCceecCCCccCccccChhhHHHHHhhccCCCCcccc
Q psy8969 811 VHIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQ 855 (1230)
Q Consensus 811 ~H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~ 855 (1230)
.|+++|++++||.|.. ||+.|...+.|..|+++|++++||.|+
T Consensus 2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~ 44 (44)
T 2eoj_A 2 SSGSSGTGENPYECCE--CGKVFSRKDQLVSHQKTHSGQSGPSSG 44 (44)
T ss_dssp CSCCSSSSCCSCEETT--TTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred CCccccCCCcCeeCCC--CCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence 4777888888888877 888888888888888888888888773
No 388
>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.70 E-value=5.3e-09 Score=83.50 Aligned_cols=43 Identities=37% Similarity=0.690 Sum_probs=35.8
Q ss_pred hhhhcccCCCceecCCCccCccccChhhHHHHHhhccCCCCcccc
Q psy8969 811 VHIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQ 855 (1230)
Q Consensus 811 ~H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~ 855 (1230)
+|+++|++++||.|.. |++.|...+.|..|+++|++++||.|+
T Consensus 2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2eq3_A 2 SSGSSGTGEKPYECNQ--CGKAFSVRSSLTTHQAIHTGKKPSGPS 44 (46)
T ss_dssp CCCCSSCCCCSSEETT--TTEECSSHHHHHHHHTTSCCCCCCCSC
T ss_pred CcccCCCCCCCeECCC--CChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence 5788888888888887 888888888888888888888888885
No 389
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=98.69 E-value=6.1e-09 Score=78.96 Aligned_cols=35 Identities=31% Similarity=0.679 Sum_probs=17.4
Q ss_pred cccccCCCCcccCCcccccccccCchhhhhhcccccC
Q psy8969 1155 HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTG 1191 (1230)
Q Consensus 1155 H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTG 1191 (1230)
|+++|+|++||+|+ .|+++|.+++.|.+|+++|+|
T Consensus 2 H~~~h~~~k~~~C~--~C~k~f~~~~~l~~H~~~H~~ 36 (37)
T 1p7a_A 2 STRGSTGIKPFQCP--DCDRSFSRSDHLALHRKRHML 36 (37)
T ss_dssp CSSTTCCSSSBCCT--TTCCCBSSHHHHHHHHGGGTC
T ss_pred CCCcCCCCCCccCC--CCCcccCcHHHHHHHHHHhcc
Confidence 44555555555552 355555555555555555544
No 390
>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.68 E-value=4.7e-09 Score=84.00 Aligned_cols=43 Identities=33% Similarity=0.638 Sum_probs=37.0
Q ss_pred hhhhcccCCCceecCCCccCccccChhhHHHHHhhccCCCCcccc
Q psy8969 811 VHIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQ 855 (1230)
Q Consensus 811 ~H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~ 855 (1230)
+|+++|++++||+|.. |++.|...+.|..|+++|++++||.|+
T Consensus 2 ~h~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2emz_A 2 SSGSSGSGERPFKCNE--CGKGFGRRSHLAGHLRLHSREKSSGPS 44 (46)
T ss_dssp CCCSCSSCCCSCCCSS--SCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred CCCcCCCCCCCeECCC--CCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence 5788888888888888 888888888888888888888888885
No 391
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=98.68 E-value=6.5e-09 Score=78.83 Aligned_cols=37 Identities=35% Similarity=0.617 Sum_probs=34.5
Q ss_pred hhcccccCCCCEeecccccCccccchhhHHHHhhhccCc
Q psy8969 1184 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTDE 1222 (1230)
Q Consensus 1184 ~H~RtHTGEKPy~C~~e~CGKsF~~ks~LkrH~R~HtGE 1222 (1230)
.|+++|+|++||+|+ .||+.|.++.+|.+|+++|+||
T Consensus 1 ~H~~~h~~~k~~~C~--~C~k~f~~~~~l~~H~~~H~~~ 37 (37)
T 1p7a_A 1 GSTRGSTGIKPFQCP--DCDRSFSRSDHLALHRKRHMLV 37 (37)
T ss_dssp CCSSTTCCSSSBCCT--TTCCCBSSHHHHHHHHGGGTCC
T ss_pred CCCCcCCCCCCccCC--CCCcccCcHHHHHHHHHHhccC
Confidence 489999999999994 7999999999999999999986
No 392
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.68 E-value=4.3e-09 Score=79.86 Aligned_cols=36 Identities=42% Similarity=0.648 Sum_probs=17.4
Q ss_pred cccCCCCcccCCcccccccccCchhhhhhcccccCCCC
Q psy8969 1157 RIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKP 1194 (1230)
Q Consensus 1157 R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKP 1194 (1230)
++|++++||+|+ .|+++|.+++.|.+|+++|++++|
T Consensus 2 ~~h~~~k~~~C~--~C~k~f~~~~~l~~H~~~h~~~kp 37 (37)
T 2elo_A 2 SSGSSGRSYSCP--VCEKSFSEDRLIKSHIKTNHPEVS 37 (37)
T ss_dssp CCCCCCCCCEET--TTTEECSSHHHHHHHHHHHCSSCC
T ss_pred CCCCCCCCcCCC--CCCCccCCHHHHHHHHHHHcCCCC
Confidence 344555555552 355555555555555555554443
No 393
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.68 E-value=8e-09 Score=82.63 Aligned_cols=43 Identities=26% Similarity=0.438 Sum_probs=33.8
Q ss_pred hhhhcccCCCceecCCCccCccccChhhHHHHHhhccC-CCCcccc
Q psy8969 811 VHIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSG-EKPYVCQ 855 (1230)
Q Consensus 811 ~H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htg-ekpy~C~ 855 (1230)
.|+++|++++||.|.. |++.|...+.|..|+++|++ ++||.|+
T Consensus 2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~~C~ 45 (46)
T 2eoy_A 2 SSGSSGQKEKCFKCNK--CEKTFSCSKYLTQHERIHTRGVKSGPSS 45 (46)
T ss_dssp CCCCCCCCSCCEECSS--SCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred CCccccCCCCCEECcC--CCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence 3777788888888877 88888888888888888887 7888774
No 394
>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=98.67 E-value=4.4e-09 Score=84.92 Aligned_cols=39 Identities=23% Similarity=0.558 Sum_probs=19.5
Q ss_pred hhcccccCCCCEeecccccCccccchhhHHHHhhhccCc
Q psy8969 1184 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTDE 1222 (1230)
Q Consensus 1184 ~H~RtHTGEKPy~C~~e~CGKsF~~ks~LkrH~R~HtGE 1222 (1230)
.|+.+|+|++||.|..+.|||+|.++++|++|+++|+||
T Consensus 8 ~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~e 46 (47)
T 1ncs_A 8 DKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED 46 (47)
T ss_dssp GGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred HHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCC
Confidence 334445555555552113555555555555555555554
No 395
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=98.67 E-value=6.3e-08 Score=136.16 Aligned_cols=270 Identities=12% Similarity=0.136 Sum_probs=152.1
Q ss_pred CCCChhHHHHHHHHHHHhccCCCCCCccchhhhHHHH--hhcCCCCCcccc-cccHHHHhhhhcccccChHHHHHHHHHH
Q psy8969 293 KKVPPPVMEVLNEELAKLGFLESHSSEFNVTRNYLDW--LTSLPWGIQSEE-NLDLTQAAKILDDDHYGMEDVKKRILEF 369 (1230)
Q Consensus 293 ~~~~~~~~~~~~~e~~~l~~~~~~~~e~~v~~~yl~~--~~~lpw~~~~~~-~~~~~~~~~~l~~d~~G~~~vK~~i~e~ 369 (1230)
..++.+.+.++.+.+.++...+.-.++.+|.--|+|. -.-.||....+. .++-... ..-+--+-=.+-++- ..+
T Consensus 1220 g~l~~~~R~~F~~~~~~~~~~~~p~~~~~v~Dy~~~~~~~~w~~W~~~v~~~~~~~~~~-~~~~ilVPT~DTvR~--~~l 1296 (3245)
T 3vkg_A 1220 GSMGLVERENFSKFIQTIAITPVPANTIPLLDYSVSIDDANWSLWKNKVPSVEVETHKV-ASPDVVIPTVDTTRH--VDV 1296 (3245)
T ss_dssp TTSCHHHHHHHHHHHHTTCSSCCCCTTSCGGGEEECTTTCSEEETTCCC---CCCSTTT-TCTTCCCCCHHHHHH--HHH
T ss_pred ccCCHHHHHHHHHHHHHhcCCCCCCCCCceEEEEEECCCCeeeehhhcCCccccCCccC-CcccceecchHHHHH--HHH
Confidence 4578888888888888877654333333333222221 111467643221 1110000 000001111222221 112
Q ss_pred HHHhhhcCCCCCceEEEeCCCCCCchHHHHH-HHHHhCCCeEEEecCCcchhHHHhhcccc------------ccccC-c
Q psy8969 370 IAVSQLKGTTQGKILCFYGPPGVGKTSIAKS-IARALNREYFRFSVGGMSDVAEIKGHRRT------------YVGAM-P 435 (1230)
Q Consensus 370 l~~~~~~~~~~~~~llL~GPPG~GKTslak~-iA~~l~~~~~~~~~~~~~d~~~i~g~~~~------------~~g~~-~ 435 (1230)
+. ..+. .+..+||+||||||||+++.. +++..+.++++++++..++...+.+.-.. +.|.. +
T Consensus 1297 l~-~ll~---~~~pvLL~GptGtGKT~li~~~L~~l~~~~~~~infS~~Tta~~l~~~~e~~~e~~~~~~~G~~~~p~~~ 1372 (3245)
T 3vkg_A 1297 LH-AWLS---EHRPLILCGPPGSGKTMTLTSTLRAFPDFEVVSLNFSSATTPELLLKTFDHHCEYKRTPSGETVLRPTQL 1372 (3245)
T ss_dssp HH-HHHH---TTCCCEEESSTTSSHHHHHHHHGGGCTTEEEEEECCCTTCCHHHHHHHHHHHEEEEECTTSCEEEEESST
T ss_pred HH-HHHH---CCCcEEEECCCCCCHHHHHHHHHHhCCCCceEEEEeeCCCCHHHHHHHHhhcceEEeccCCCcccCCCcC
Confidence 21 1222 245699999999999987754 55555777889998887776555432111 11111 1
Q ss_pred hhHHHHHHhhcCCCCEEEEecccccCCCCCCC--hhhHHHhhcChhhhhhhhhhccCccccCCceEEEEecCCC-----C
Q psy8969 436 GKVIQCMKKTKTENPLVLIDEVDKIGKGYSGD--PASALLEMLDPEQNANFLDHYLDVPVDLSRVLFICTANVI-----D 508 (1230)
Q Consensus 436 g~i~~~~~~~~~~~pvillDEIDk~~~~~~~~--~~~all~~ld~~q~~~f~d~~~~~~~d~s~v~~I~TaN~~-----~ 508 (1230)
| ..-|||||||+.-..+.-|. |...|.++||.. .|.|.--...+.+.++.||+|.|++ .
T Consensus 1373 G-----------k~~VlFiDDiNmp~~D~yGtQ~~ielLrqlld~~---g~yd~~~~~~~~i~d~~~vaamnPp~~gGr~ 1438 (3245)
T 3vkg_A 1373 G-----------KWLVVFCDEINLPSTDKYGTQRVITFIRQMVEKG---GFWRTSDHTWIKLDKIQFVGACNPPTDAGRV 1438 (3245)
T ss_dssp T-----------CEEEEEETTTTCCCCCTTSCCHHHHHHHHHHHHS---EEEETTTTEEEEESSEEEEEEECCTTSTTCC
T ss_pred C-----------ceEEEEecccCCCCccccccccHHHHHHHHHHcC---CeEECCCCeEEEecCeEEEEEcCCCCCCCCc
Confidence 2 12388899999766554444 567777777642 3443211112345789999999987 5
Q ss_pred CCCHhhhcccceeecCCCCHHHHHHHHHHhhcchhHHhcCCCCCCcccCHHHHHHHHHHhh-------------hhhhHH
Q psy8969 509 TIPEPLRDRMEMIDVSGYVAEEKVAIAAQYLIPQAMKESGLSPEQITLEPSAIQVLIKNYC-------------RESGVR 575 (1230)
Q Consensus 509 ~I~~~L~~R~~~i~~~~~~~~e~~~i~~~~l~~~~~~~~gl~~~~i~~~~~~~~~li~~~~-------------~e~gvR 575 (1230)
.|++.|++||.+|.++.++.++...|...++-. .++ ..+.-..+.+..+...++-|. ...+.|
T Consensus 1439 ~l~~Rf~r~F~vi~i~~ps~esL~~If~til~~-~l~---~~p~l~~~~~~lv~ati~ly~~v~~~~lp~~k~HY~FnLR 1514 (3245)
T 3vkg_A 1439 QLTHRFLRHAPILLVDFPSTSSLTQIYGTFNRA-LMK---LLPNLRSFADNLTDAMVEFYSESQKRFTPDIQAHYIYSPR 1514 (3245)
T ss_dssp CCCHHHHTTCCEEECCCCCHHHHHHHHHHHHHH-HTT---SCGGGTTSHHHHHHHHHHHHHHHHHHSCTTTSTTCCCCHH
T ss_pred cCCHHHHhhceEEEeCCCCHHHHHHHHHHHHHH-HHh---hChHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCccccHH
Confidence 799999999999999999999998887654321 111 112111233455555554433 234778
Q ss_pred HHHHHHHHHHHH
Q psy8969 576 NLQKHIEKVTRK 587 (1230)
Q Consensus 576 ~l~~~i~~i~r~ 587 (1230)
.|-|.+..+++.
T Consensus 1515 DLsrv~qGll~~ 1526 (3245)
T 3vkg_A 1515 ELSRWDRALLEA 1526 (3245)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 887777776653
No 396
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.66 E-value=9.7e-09 Score=82.06 Aligned_cols=43 Identities=44% Similarity=0.699 Sum_probs=28.2
Q ss_pred hhhcccCCCceecCCCccCccccChhhHHHHHhhccCCCCccccc
Q psy8969 812 HIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQV 856 (1230)
Q Consensus 812 H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~~ 856 (1230)
++++|++++||.|.. |++.|...+.|.+|+++|++++||.|.+
T Consensus 3 ~~~~h~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2ep0_A 3 SGSSGTGEKPYKCDV--CHKSFRYGSSLTVHQRIHTGEKPSGPSS 45 (46)
T ss_dssp CCCSSTTCCSEECSS--SCCEESSHHHHHHHHTTTSSSCCCSCCC
T ss_pred CCCCCCCCCCeeCcc--cCcccCChHHHHHHHHHhCCCCCCCCCC
Confidence 345666666666666 6666666666666666666666666653
No 397
>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.66 E-value=9.1e-09 Score=81.46 Aligned_cols=42 Identities=21% Similarity=0.347 Sum_probs=34.0
Q ss_pred hhhcccCCCceecCCCccCccccChhhHHHHHhhccCCCCcccc
Q psy8969 812 HIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQ 855 (1230)
Q Consensus 812 H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~ 855 (1230)
|+++|++++||.|.. |++.|...+.|..|+++|++++||.|.
T Consensus 3 h~~~h~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~ 44 (44)
T 2eou_A 3 SGSSGAAKTTSECQE--CGKIFRHSSLLIEHQALHAGESGPSSG 44 (44)
T ss_dssp CSCSCSSSCCCCCTT--TCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred CCCCCCCCcCeECCC--CCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence 677788888888877 888888888888888888888888773
No 398
>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.66 E-value=6e-09 Score=80.67 Aligned_cols=34 Identities=24% Similarity=0.345 Sum_probs=19.7
Q ss_pred ccCCCCEeecccccCccccchhhHHHHhhhccCc
Q psy8969 1189 HTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTDE 1222 (1230)
Q Consensus 1189 HTGEKPy~C~~e~CGKsF~~ks~LkrH~R~HtGE 1222 (1230)
|+||+||+|+.+.|+|+|.++++|++|+|+|+|+
T Consensus 4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~ 37 (38)
T 2eln_A 4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL 37 (38)
T ss_dssp SSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence 5566666663223666666666666666666654
No 399
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A
Probab=98.65 E-value=4.4e-09 Score=81.00 Aligned_cols=37 Identities=19% Similarity=0.495 Sum_probs=26.6
Q ss_pred cCCCCcccCCcccccccccCchhhhhhcccccCCCCEee
Q psy8969 1159 HSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 1197 (1230)
Q Consensus 1159 HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C 1197 (1230)
|++++||+|+ .|++.|.+++.|.+|+++|+|++||.|
T Consensus 1 h~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~~ 37 (39)
T 1njq_A 1 XWPPRSYTCS--FCKREFRSAQALGGHMNVHRRDRARLR 37 (39)
T ss_dssp -CCSSSEECT--TTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred CCCCCceECC--CCCcccCCHHHHHHHHHHcCCCcccee
Confidence 6677777774 477777777777777777777777765
No 400
>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.63 E-value=1.5e-08 Score=78.41 Aligned_cols=36 Identities=28% Similarity=0.481 Sum_probs=32.1
Q ss_pred ccCCCCcccCCcccccccccCchhhhhhcccccCCC
Q psy8969 1158 IHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEK 1193 (1230)
Q Consensus 1158 ~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEK 1193 (1230)
.|+|||||+|+.+.|+|+|.+++.|++|+++|||+.
T Consensus 3 ~~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~~ 38 (38)
T 2eln_A 3 SGSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTALD 38 (38)
T ss_dssp CSSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCCC
T ss_pred CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence 589999999963359999999999999999999974
No 401
>2w58_A DNAI, primosome component (helicase loader); ATP-binding, nucleotide-binding, hydrolase; HET: ADP; 2.50A {Geobacillus kaustophilus HTA426}
Probab=98.62 E-value=1.7e-08 Score=107.28 Aligned_cols=91 Identities=22% Similarity=0.254 Sum_probs=53.1
Q ss_pred hHHHHHHHHHHHHHhhhcCCCCCceEEEeCCCCCCchHHHHHHHHHh---CCCeEEEecCCcchhHHHhhccccccccCc
Q psy8969 359 MEDVKKRILEFIAVSQLKGTTQGKILCFYGPPGVGKTSIAKSIARAL---NREYFRFSVGGMSDVAEIKGHRRTYVGAMP 435 (1230)
Q Consensus 359 ~~~vK~~i~e~l~~~~~~~~~~~~~llL~GPPG~GKTslak~iA~~l---~~~~~~~~~~~~~d~~~i~g~~~~~~g~~~ 435 (1230)
+..+.+.+.+|+... .....+..++|+||||||||+||++||..+ +.+++.+++..+.+ .+.. .+.....
T Consensus 34 ~~~~~~~~~~~~~~~--~~~~~~~~~~l~G~~GtGKT~la~~i~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~~~~~ 106 (202)
T 2w58_A 34 RIKAIRFAERFVAEY--EPGKKMKGLYLHGSFGVGKTYLLAAIANELAKRNVSSLIVYVPELFR--ELKH---SLQDQTM 106 (202)
T ss_dssp HHHHHHHHHHHHHHC--CSSCCCCEEEEECSTTSSHHHHHHHHHHHHHTTTCCEEEEEHHHHHH--HHHH---C---CCC
T ss_pred HHHHHHHHHHHHHHh--hhccCCCeEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEEEhHHHHH--HHHH---HhccchH
Confidence 445666666666422 111123789999999999999999999988 56666666533221 1211 1111111
Q ss_pred hhHHHHHHhhcCCCCEEEEeccccc
Q psy8969 436 GKVIQCMKKTKTENPLVLIDEVDKI 460 (1230)
Q Consensus 436 g~i~~~~~~~~~~~pvillDEIDk~ 460 (1230)
..+...+. ..++|+||||+..
T Consensus 107 ~~~~~~~~----~~~~lilDei~~~ 127 (202)
T 2w58_A 107 NEKLDYIK----KVPVLMLDDLGAE 127 (202)
T ss_dssp HHHHHHHH----HSSEEEEEEECCC
T ss_pred HHHHHHhc----CCCEEEEcCCCCC
Confidence 22233332 2369999999865
No 402
>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=98.60 E-value=7.6e-09 Score=79.01 Aligned_cols=37 Identities=19% Similarity=0.396 Sum_probs=20.8
Q ss_pred cCCCCcccCCcccccccccCchhhhhhcccccCCCCE
Q psy8969 1159 HSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPY 1195 (1230)
Q Consensus 1159 HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy 1195 (1230)
|+|++||+|++..|+++|.+++.|++|+++|++++||
T Consensus 1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~ 37 (38)
T 1bhi_A 1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF 37 (38)
T ss_dssp CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence 4556666663113666666666666666666666554
No 403
>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.60 E-value=1.9e-08 Score=80.88 Aligned_cols=42 Identities=36% Similarity=0.592 Sum_probs=26.6
Q ss_pred hhhcccCCCceecC--CCccCccccChhhHHHHHhhccCCCCcccc
Q psy8969 812 HIRTHTGEKPYVCG--EAGCDKSFASATNYKNHMRIHSGEKPYVCQ 855 (1230)
Q Consensus 812 H~r~H~gekpy~C~--~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~ 855 (1230)
|.++|++++||+|. . |++.|...+.|.+|+++|++++||+|.
T Consensus 3 ~~~~H~~~k~~~C~~~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~ 46 (48)
T 2ent_A 3 SGSSGTGEKPFACTWPG--CGWRFSRSDELSRHRRSHSGVKPSGPS 46 (48)
T ss_dssp CCCSSCCCCCEECCSSS--CCCEESSHHHHHHHHTTSCCCCSCSSC
T ss_pred CCCCcCCCCCeECCCCC--CCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence 45566666666665 4 666666666666666666666666664
No 404
>4akg_A Glutathione S-transferase class-MU 26 kDa isozyme heavy chain cytoplasmic; motor protein, AAA+ protein, ASCE protein, P-loop ntpase; HET: ATP ADP; 3.30A {Schistosoma japonicum} PDB: 4ai6_A* 4akh_A* 4aki_A* 3qmz_A
Probab=98.60 E-value=1.3e-07 Score=132.41 Aligned_cols=135 Identities=19% Similarity=0.289 Sum_probs=90.9
Q ss_pred CceEEEeCCCCCCchHHHHHHHHHhCCCeEEEecCCcchhHHHhhccccccccCchhHHHHHHhhcCCCCEEEEeccccc
Q psy8969 381 GKILCFYGPPGVGKTSIAKSIARALNREYFRFSVGGMSDVAEIKGHRRTYVGAMPGKVIQCMKKTKTENPLVLIDEVDKI 460 (1230)
Q Consensus 381 ~~~llL~GPPG~GKTslak~iA~~l~~~~~~~~~~~~~d~~~i~g~~~~~~g~~~g~i~~~~~~~~~~~pvillDEIDk~ 460 (1230)
+.+.++.||||||||++++++|+++|++++++++..-.|...+ |++...+... ...++||||+++
T Consensus 645 ~~~~~l~GpaGtGKTe~vk~LA~~lg~~~v~~nc~e~ld~~~l------------g~~~~g~~~~---Gaw~~~DE~nr~ 709 (2695)
T 4akg_A 645 KYGGCFFGPAGTGKTETVKAFGQNLGRVVVVFNCDDSFDYQVL------------SRLLVGITQI---GAWGCFDEFNRL 709 (2695)
T ss_dssp TCEEEEECCTTSCHHHHHHHHHHTTTCCCEEEETTSSCCHHHH------------HHHHHHHHHH---TCEEEEETTTSS
T ss_pred CCCCcccCCCCCCcHHHHHHHHHHhCCcEEEEECCCCCChhHh------------hHHHHHHHhc---CCEeeehhhhhc
Confidence 3567899999999999999999999999999999877775554 3333333333 468999999987
Q ss_pred CCCCCCChhhHHHhhcChhhhhhhhhh-----ccCccccC-CceEEEEecCC----CCCCCHhhhcccceeecCCCCHHH
Q psy8969 461 GKGYSGDPASALLEMLDPEQNANFLDH-----YLDVPVDL-SRVLFICTANV----IDTIPEPLRDRMEMIDVSGYVAEE 530 (1230)
Q Consensus 461 ~~~~~~~~~~all~~ld~~q~~~f~d~-----~~~~~~d~-s~v~~I~TaN~----~~~I~~~L~~R~~~i~~~~~~~~e 530 (1230)
.. +..+++-+.|+.-+.. ..+. ..+..+.+ .++.+++|.|+ ...+|++|++||..|.+..+..+.
T Consensus 710 ~~----evLs~l~~~l~~i~~a-l~~~~~~i~~~g~~i~l~~~~~vfiT~NPgy~g~~eLP~~Lk~~Fr~v~m~~Pd~~~ 784 (2695)
T 4akg_A 710 DE----KVLSAVSANIQQIQNG-LQVGKSHITLLEEETPLSPHTAVFITLNPGYNGRSELPENLKKSFREFSMKSPQSGT 784 (2695)
T ss_dssp CH----HHHHHHHHHHHHHHHH-HHHTCSEEECSSSEEECCTTCEEEEEECCCSSSSCCCCHHHHTTEEEEECCCCCHHH
T ss_pred Ch----HHHHHHHHHHHHHHHH-HHcCCcEEeeCCcEEecCCCceEEEEeCCCccCcccccHHHHhheEEEEeeCCCHHH
Confidence 43 3455554444322111 1111 11212222 34667788993 458999999999999888777666
Q ss_pred HHHHH
Q psy8969 531 KVAIA 535 (1230)
Q Consensus 531 ~~~i~ 535 (1230)
..+|.
T Consensus 785 i~ei~ 789 (2695)
T 4akg_A 785 IAEMI 789 (2695)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55553
No 405
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.59 E-value=1.9e-08 Score=76.25 Aligned_cols=36 Identities=25% Similarity=0.568 Sum_probs=33.8
Q ss_pred cccccCCCCEeecccccCccccchhhHHHHhhhccCcc
Q psy8969 1186 IRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTDEF 1223 (1230)
Q Consensus 1186 ~RtHTGEKPy~C~~e~CGKsF~~ks~LkrH~R~HtGE~ 1223 (1230)
|++|++++||.|. .||++|.++.+|.+|+++|++|+
T Consensus 1 ~~~h~~~k~~~C~--~C~k~f~~~~~l~~H~~~h~~~k 36 (37)
T 2elo_A 1 GSSGSSGRSYSCP--VCEKSFSEDRLIKSHIKTNHPEV 36 (37)
T ss_dssp CCCCCCCCCCEET--TTTEECSSHHHHHHHHHHHCSSC
T ss_pred CCCCCCCCCcCCC--CCCCccCCHHHHHHHHHHHcCCC
Confidence 5789999999994 79999999999999999999986
No 406
>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=98.59 E-value=1.5e-08 Score=81.70 Aligned_cols=44 Identities=20% Similarity=0.409 Sum_probs=38.2
Q ss_pred hhhhccccccCCCCcccCCcccccccccCchhhhhhcccccCCC
Q psy8969 1150 HHMKVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEK 1193 (1230)
Q Consensus 1150 s~Lk~H~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEK 1193 (1230)
..+..|+..|+|++||+|++..|+|+|.+++.|++|+++|+|++
T Consensus 4 ~~~~~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek 47 (47)
T 1ncs_A 4 RGSIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47 (47)
T ss_dssp CSSGGGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred hHHHHHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence 45667778899999999953359999999999999999999985
No 407
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A
Probab=98.57 E-value=1.3e-08 Score=78.29 Aligned_cols=37 Identities=24% Similarity=0.410 Sum_probs=34.4
Q ss_pred cCCCCCccCCCCCCCCCCchhhhccccccCCCCcccC
Q psy8969 1131 STSSENNVCPECKKTFSSAHHMKVHLRIHSGIRPYKC 1167 (1230)
Q Consensus 1131 ~t~~kpy~C~~CgK~F~s~s~Lk~H~R~HTGEKPykC 1167 (1230)
|+++++|.|+.||+.|.+.++|.+|+++|+|++||.|
T Consensus 1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~ 37 (39)
T 1njq_A 1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR 37 (39)
T ss_dssp -CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred CCCCCceECCCCCcccCCHHHHHHHHHHcCCCcccee
Confidence 4567899999999999999999999999999999987
No 408
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=98.55 E-value=2.4e-08 Score=74.65 Aligned_cols=34 Identities=35% Similarity=0.683 Sum_probs=17.4
Q ss_pred cCCCCcccCCcccccccccCchhhhhhcccccCCCC
Q psy8969 1159 HSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKP 1194 (1230)
Q Consensus 1159 HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKP 1194 (1230)
|+|++||+|+ .|++.|.+++.|.+|+++|++++|
T Consensus 2 H~~~k~~~C~--~C~k~f~~~~~l~~H~~~H~~~~~ 35 (35)
T 1srk_A 2 SSGKRPFVCR--ICLSAFTTKANCARHLKVHTDTLS 35 (35)
T ss_dssp CSCCSCEECS--SSCCEESSHHHHHHHHGGGTSCCC
T ss_pred CCCCcCeeCC--CCCcccCCHHHHHHHHHHcCCCCC
Confidence 4555555553 355555555555555555555543
No 409
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.54 E-value=2.1e-08 Score=74.78 Aligned_cols=32 Identities=34% Similarity=0.649 Sum_probs=15.0
Q ss_pred ccCCCCEeecccccCccccchhhHHHHhhhccCc
Q psy8969 1189 HTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTDE 1222 (1230)
Q Consensus 1189 HTGEKPy~C~~e~CGKsF~~ks~LkrH~R~HtGE 1222 (1230)
|++++||.|. .||+.|.++.+|.+|+++|+++
T Consensus 2 h~~~k~~~C~--~C~k~f~~~~~L~~H~~~h~~~ 33 (35)
T 2elx_A 2 SSGSSGYVCA--LCLKKFVSSIRLRSHIREVHGA 33 (35)
T ss_dssp CCCCCSEECS--SSCCEESSHHHHHHHHHHTSCT
T ss_pred CCCCCCeECC--CCcchhCCHHHHHHHHHHHcCC
Confidence 4444444442 3444444444444444444444
No 410
>2fna_A Conserved hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE ADP; 2.00A {Sulfolobus solfataricus} SCOP: a.4.5.11 c.37.1.20
Probab=98.52 E-value=4.4e-07 Score=104.01 Aligned_cols=160 Identities=18% Similarity=0.284 Sum_probs=93.9
Q ss_pred ccccChHHHHHHHHHHHHHhhhcCCCCCceEEEeCCCCCCchHHHHHHHHHhCCCeEEEecCCc-----chhHHHh-hcc
Q psy8969 354 DDHYGMEDVKKRILEFIAVSQLKGTTQGKILCFYGPPGVGKTSIAKSIARALNREYFRFSVGGM-----SDVAEIK-GHR 427 (1230)
Q Consensus 354 ~d~~G~~~vK~~i~e~l~~~~~~~~~~~~~llL~GPPG~GKTslak~iA~~l~~~~~~~~~~~~-----~d~~~i~-g~~ 427 (1230)
+..+|=++..+.|.+ +. . +.++++||+|+|||+|++.+++.++..++.+++.+. .+...+. ...
T Consensus 13 ~~~~gR~~el~~L~~-l~-----~----~~v~i~G~~G~GKT~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 82 (357)
T 2fna_A 13 KDFFDREKEIEKLKG-LR-----A----PITLVLGLRRTGKSSIIKIGINELNLPYIYLDLRKFEERNYISYKDFLLELQ 82 (357)
T ss_dssp GGSCCCHHHHHHHHH-TC-----S----SEEEEEESTTSSHHHHHHHHHHHHTCCEEEEEGGGGTTCSCCCHHHHHHHHH
T ss_pred HHhcChHHHHHHHHH-hc-----C----CcEEEECCCCCCHHHHHHHHHHhcCCCEEEEEchhhccccCCCHHHHHHHHH
Confidence 567888777777766 52 1 589999999999999999999999888877887643 1111100 000
Q ss_pred -----------------ccc----c-------------ccCchhHHHHHHhhcCCCCEEEEecccccCCCCCCChhhHHH
Q psy8969 428 -----------------RTY----V-------------GAMPGKVIQCMKKTKTENPLVLIDEVDKIGKGYSGDPASALL 473 (1230)
Q Consensus 428 -----------------~~~----~-------------g~~~g~i~~~~~~~~~~~pvillDEIDk~~~~~~~~~~~all 473 (1230)
..+ + ......+...+........||+|||++.+......+....|.
T Consensus 83 ~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~vlvlDe~~~~~~~~~~~~~~~l~ 162 (357)
T 2fna_A 83 KEINKLVKRLPSLLKALKNIQGIVIMGNEIKFNWNRKDRLSFANLLESFEQASKDNVIIVLDEAQELVKLRGVNLLPALA 162 (357)
T ss_dssp HHHHHHHHHCTTHHHHTTTSTTEEECSSSEEEC-----CCCHHHHHHHHHHTCSSCEEEEEETGGGGGGCTTCCCHHHHH
T ss_pred HHHHHHhhhhhHHHHHhcccceEEecceEEEeccCCcchhhHHHHHHHHHhcCCCCeEEEEECHHHhhccCchhHHHHHH
Confidence 000 0 011123444444332223477899999975311111112221
Q ss_pred hhcChhhhhhhhhhccCccccCCceEEEEecCCC---------CCCCHhhhccc-ceeecCCCCHHHHHHHHHHhh
Q psy8969 474 EMLDPEQNANFLDHYLDVPVDLSRVLFICTANVI---------DTIPEPLRDRM-EMIDVSGYVAEEKVAIAAQYL 539 (1230)
Q Consensus 474 ~~ld~~q~~~f~d~~~~~~~d~s~v~~I~TaN~~---------~~I~~~L~~R~-~~i~~~~~~~~e~~~i~~~~l 539 (1230)
.+ .+. ..++.+|+|++.. .....++..|. ..|.+.+++.+|...++...+
T Consensus 163 ~~---------~~~-------~~~~~~i~~g~~~~~l~~~l~~~~~~~~l~~r~~~~i~l~~l~~~e~~~~l~~~~ 222 (357)
T 2fna_A 163 YA---------YDN-------LKRIKFIMSGSEMGLLYDYLRVEDPESPLFGRAFSTVELKPFSREEAIEFLRRGF 222 (357)
T ss_dssp HH---------HHH-------CTTEEEEEEESSHHHHHHHTTTTCTTSTTTTCCCEEEEECCCCHHHHHHHHHHHH
T ss_pred HH---------HHc-------CCCeEEEEEcCchHHHHHHHhccCCCCccccCccceeecCCCCHHHHHHHHHHHH
Confidence 11 111 1366777776643 23334566676 689999999999988776643
No 411
>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=98.52 E-value=3e-08 Score=86.17 Aligned_cols=39 Identities=15% Similarity=0.329 Sum_probs=35.5
Q ss_pred ccCCCCCccCCC--CCCCCCCchhhhccc-cccCCCCcccCC
Q psy8969 1130 KSTSSENNVCPE--CKKTFSSAHHMKVHL-RIHSGIRPYKCP 1168 (1230)
Q Consensus 1130 ~~t~~kpy~C~~--CgK~F~s~s~Lk~H~-R~HTGEKPykCp 1168 (1230)
..++++||.|.. |||+|..+++|++|+ |+|||+|||-|.
T Consensus 21 ~~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~ 62 (73)
T 1x3c_A 21 RYSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSA 62 (73)
T ss_dssp SSCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCC
T ss_pred cccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCcccc
Confidence 457899999975 999999999999997 699999999993
No 412
>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.52 E-value=3.8e-08 Score=74.87 Aligned_cols=35 Identities=23% Similarity=0.411 Sum_probs=24.8
Q ss_pred cccccCCCCEeecccccCccccchhhHHHH-hhhccCc
Q psy8969 1186 IRTHTGEKPYRCAHEFCSKSFKTSGDLQKH-VRTHTDE 1222 (1230)
Q Consensus 1186 ~RtHTGEKPy~C~~e~CGKsF~~ks~LkrH-~R~HtGE 1222 (1230)
|++|+|++||+|. .||++|.++.+|++| +++|+|+
T Consensus 1 ~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~~H~~~ 36 (37)
T 2elm_A 1 GSSGSSGHLYYCS--QCHYSSITKNCLKRHVIQKHSNI 36 (37)
T ss_dssp CCSSSSSCEEECS--SSSCEEECHHHHHHHHHHHTCCC
T ss_pred CCccCCCcCeECC--CCCcccCCHHHHHHHHHHHccCc
Confidence 4567777777773 577777777777777 7777765
No 413
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1
Probab=98.49 E-value=3.2e-08 Score=73.43 Aligned_cols=30 Identities=30% Similarity=0.670 Sum_probs=14.4
Q ss_pred CccCCCCCCCCCCchhhhccccccCCCCcc
Q psy8969 1136 NNVCPECKKTFSSAHHMKVHLRIHSGIRPY 1165 (1230)
Q Consensus 1136 py~C~~CgK~F~s~s~Lk~H~R~HTGEKPy 1165 (1230)
||.|+.|||.|.+.++|..|+++|+|++||
T Consensus 2 p~~C~~C~k~F~~~~~L~~H~~~H~~~~~~ 31 (33)
T 1rim_A 2 KFACPECPKRFMRSDHLSKHITLHELLGEE 31 (33)
T ss_dssp CCCCSSSCCCCSSHHHHHHHHHHHTTTCCC
T ss_pred cccCCCCCchhCCHHHHHHHHHHhCCCCCC
Confidence 344444444444444444444444444444
No 414
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.47 E-value=7.3e-08 Score=71.78 Aligned_cols=35 Identities=31% Similarity=0.540 Sum_probs=32.9
Q ss_pred ccCCCCcccCCcccccccccCchhhhhhcccccCCCC
Q psy8969 1158 IHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKP 1194 (1230)
Q Consensus 1158 ~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKP 1194 (1230)
+|+|++||+|+ .|+++|.+++.|++|+++|++++|
T Consensus 1 ~h~~~k~~~C~--~C~k~f~~~~~L~~H~~~h~~~kp 35 (35)
T 2elx_A 1 GSSGSSGYVCA--LCLKKFVSSIRLRSHIREVHGAAQ 35 (35)
T ss_dssp CCCCCCSEECS--SSCCEESSHHHHHHHHHHTSCTTC
T ss_pred CCCCCCCeECC--CCcchhCCHHHHHHHHHHHcCCCC
Confidence 58999999995 599999999999999999999986
No 415
>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.46 E-value=2.4e-08 Score=89.34 Aligned_cols=65 Identities=22% Similarity=0.299 Sum_probs=39.8
Q ss_pred HHHhhhhcccCCCceecCCCccCccccChhhHHHHHhhccCCCCccccccccccccCCchhHhhhhccccCC
Q psy8969 808 IRKVHIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDI 879 (1230)
Q Consensus 808 ~L~~H~r~H~gekpy~C~~~~Cgk~F~~~s~L~~H~r~Htgekpy~C~~~~C~k~F~~~~~L~~H~~~H~~e 879 (1230)
.|..|+++|.+++||.|.. |++.|. .+.|..|+ .|.+++||.|.. |++.|. ...|..|+++|.++
T Consensus 4 ~L~~H~~~~c~~r~~~C~~--C~~~~~-~~~L~~H~-~~c~~~~~~C~~--C~~~~~-~~~l~~H~~~c~~~ 68 (75)
T 2d9k_A 4 GSSGHEETECPLRLAVCQH--CDLELS-ILKLKEHE-DYCGARTELCGN--CGRNVL-VKDLKTHPEVCGRE 68 (75)
T ss_dssp CCSCCCCCCCCCCCEECSS--SCCEEC-HHHHHHHH-HHHHHCEEECSS--SCCEEE-TTGGGTHHHHBTTB
T ss_pred HHHhhCcccCCCcccCCcc--cChHhh-HHHHHHHH-hHcCCCceEccc--CCCcCc-HHHHHHHHHHccCC
Confidence 4556666666666666666 666663 66666666 666666666653 666555 35666666665544
No 416
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=98.45 E-value=9e-08 Score=71.43 Aligned_cols=35 Identities=29% Similarity=0.791 Sum_probs=32.3
Q ss_pred cccCCCCEeecccccCccccchhhHHHHhhhccCccc
Q psy8969 1188 THTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTDEFQ 1224 (1230)
Q Consensus 1188 tHTGEKPy~C~~e~CGKsF~~ks~LkrH~R~HtGE~~ 1224 (1230)
+|+|++||.|. +||+.|.++.+|.+|+++|++++.
T Consensus 1 ~H~~~k~~~C~--~C~k~f~~~~~l~~H~~~H~~~~~ 35 (35)
T 1srk_A 1 GSSGKRPFVCR--ICLSAFTTKANCARHLKVHTDTLS 35 (35)
T ss_dssp CCSCCSCEECS--SSCCEESSHHHHHHHHGGGTSCCC
T ss_pred CCCCCcCeeCC--CCCcccCCHHHHHHHHHHcCCCCC
Confidence 59999999994 799999999999999999999863
No 417
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.43 E-value=8.7e-08 Score=72.57 Aligned_cols=34 Identities=24% Similarity=0.623 Sum_probs=21.0
Q ss_pred ccccCCCCEeecccccCccccch-hhHHHHhhhccCc
Q psy8969 1187 RTHTGEKPYRCAHEFCSKSFKTS-GDLQKHVRTHTDE 1222 (1230)
Q Consensus 1187 RtHTGEKPy~C~~e~CGKsF~~k-s~LkrH~R~HtGE 1222 (1230)
++|++++||.|+ .|++.|.++ .+|.+|+++|+||
T Consensus 2 ~~h~~~k~~~C~--~C~k~f~~~~~~L~~H~~~H~~~ 36 (37)
T 2elp_A 2 SSGSSGRAMKCP--YCDFYFMKNGSDLQRHIWAHEGV 36 (37)
T ss_dssp CSCCCCCCEECS--SSSCEECSSCHHHHHHHHHHHTC
T ss_pred CCCCCCCCeECC--CCChhhccCHHHHHHHHHhcCCC
Confidence 456666666663 466666666 6666666666655
No 418
>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}
Probab=98.42 E-value=4e-08 Score=72.29 Aligned_cols=30 Identities=20% Similarity=0.459 Sum_probs=16.4
Q ss_pred CccCCCCCCCCCCchhhhccccccCCCCcc
Q psy8969 1136 NNVCPECKKTFSSAHHMKVHLRIHSGIRPY 1165 (1230)
Q Consensus 1136 py~C~~CgK~F~s~s~Lk~H~R~HTGEKPy 1165 (1230)
||.|+.|||.|.+.++|.+|+++|++++||
T Consensus 2 p~~C~~C~k~f~~~~~L~~H~~~H~~~kp~ 31 (32)
T 2kfq_A 2 AFACPACPKRFMRSDALSKHIKTAFIVVAL 31 (32)
T ss_dssp CSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred CCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence 455555555555555555555555555554
No 419
>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.42 E-value=5.4e-08 Score=74.02 Aligned_cols=35 Identities=26% Similarity=0.294 Sum_probs=32.0
Q ss_pred ccccCCCCcccCCcccccccccCchhhhhh-cccccCC
Q psy8969 1156 LRIHSGIRPYKCPVEYCEKAFSTQYSRKAH-IRTHTGE 1192 (1230)
Q Consensus 1156 ~R~HTGEKPykCpve~CgKsF~~ks~Lk~H-~RtHTGE 1192 (1230)
|++|+|++||+|+ .|+++|.+++.|++| +++|+++
T Consensus 1 ~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~~H~~~ 36 (37)
T 2elm_A 1 GSSGSSGHLYYCS--QCHYSSITKNCLKRHVIQKHSNI 36 (37)
T ss_dssp CCSSSSSCEEECS--SSSCEEECHHHHHHHHHHHTCCC
T ss_pred CCccCCCcCeECC--CCCcccCCHHHHHHHHHHHccCc
Confidence 5789999999995 699999999999999 9999986
No 420
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.42 E-value=5.4e-08 Score=73.72 Aligned_cols=35 Identities=37% Similarity=0.618 Sum_probs=31.4
Q ss_pred cccCCCCcccCCcccccccccCc-hhhhhhcccccCCC
Q psy8969 1157 RIHSGIRPYKCPVEYCEKAFSTQ-YSRKAHIRTHTGEK 1193 (1230)
Q Consensus 1157 R~HTGEKPykCpve~CgKsF~~k-s~Lk~H~RtHTGEK 1193 (1230)
++|++++||+|+ .|+++|.++ +.|.+|+++|++++
T Consensus 2 ~~h~~~k~~~C~--~C~k~f~~~~~~L~~H~~~H~~~k 37 (37)
T 2elp_A 2 SSGSSGRAMKCP--YCDFYFMKNGSDLQRHIWAHEGVK 37 (37)
T ss_dssp CSCCCCCCEECS--SSSCEECSSCHHHHHHHHHHHTCC
T ss_pred CCCCCCCCeECC--CCChhhccCHHHHHHHHHhcCCCC
Confidence 679999999995 599999999 99999999999875
No 421
>1jr3_D DNA polymerase III, delta subunit; processivity, processivity clamp, clamp loader, AAA+ ATPase, transferase; HET: DNA; 2.70A {Escherichia coli} SCOP: a.80.1.1 c.37.1.20 PDB: 1jqj_C* 1xxh_A* 1xxi_A* 3glf_A* 3glg_A* 3glh_A* 3gli_A*
Probab=98.42 E-value=5.6e-07 Score=103.79 Aligned_cols=179 Identities=14% Similarity=0.104 Sum_probs=120.7
Q ss_pred CCceEEEeCCCCCCchHHHHHHHHHhC----CCeEEEecCCcchhHHHhhccccccccCchhHHHHHHh--hcCCCCEEE
Q psy8969 380 QGKILCFYGPPGVGKTSIAKSIARALN----REYFRFSVGGMSDVAEIKGHRRTYVGAMPGKVIQCMKK--TKTENPLVL 453 (1230)
Q Consensus 380 ~~~~llL~GPPG~GKTslak~iA~~l~----~~~~~~~~~~~~d~~~i~g~~~~~~g~~~g~i~~~~~~--~~~~~pvil 453 (1230)
-.+..+|+||+|+||++.++.|++.+. .++..+.+.+-.+..+ ++..+.. ......||+
T Consensus 17 ~~~~yl~~G~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---------------l~~~~~~~plf~~~kvvi 81 (343)
T 1jr3_D 17 LRAAYLLLGNDPLLLQESQDAVRQVAAAQGFEEHHTFSIDPNTDWNA---------------IFSLCQAMSLFASRQTLL 81 (343)
T ss_dssp CCSEEEEEESCHHHHHHHHHHHHHHHHHHTCCEEEEEECCTTCCHHH---------------HHHHHHHHHHCCSCEEEE
T ss_pred CCcEEEEECCcHHHHHHHHHHHHHHHHhCCCCeeEEEEecCCCCHHH---------------HHHHhcCcCCccCCeEEE
Confidence 457899999999999999999999763 1333333333222222 2222211 112356999
Q ss_pred Eecccc-cCCCCCCChhhHHHhhcChhhhhhhhhhccCccccCCceEEEEecCCC------CCCCHhhhcccceeecCCC
Q psy8969 454 IDEVDK-IGKGYSGDPASALLEMLDPEQNANFLDHYLDVPVDLSRVLFICTANVI------DTIPEPLRDRMEMIDVSGY 526 (1230)
Q Consensus 454 lDEIDk-~~~~~~~~~~~all~~ld~~q~~~f~d~~~~~~~d~s~v~~I~TaN~~------~~I~~~L~~R~~~i~~~~~ 526 (1230)
|||+|. ++. +..++|++.|+. + ..+++||++++.+ ..+.+++.+|+.++++..+
T Consensus 82 i~~~~~kl~~----~~~~aLl~~le~-------------p--~~~~~~il~~~~~~~~~~~~k~~~~i~sr~~~~~~~~l 142 (343)
T 1jr3_D 82 LLLPENGPNA----AINEQLLTLTGL-------------L--HDDLLLIVRGNKLSKAQENAAWFTALANRSVQVTCQTP 142 (343)
T ss_dssp EECCSSCCCT----THHHHHHHHHTT-------------C--BTTEEEEEEESCCCTTTTTSHHHHHHTTTCEEEEECCC
T ss_pred EECCCCCCCh----HHHHHHHHHHhc-------------C--CCCeEEEEEcCCCChhhHhhHHHHHHHhCceEEEeeCC
Confidence 999998 643 456777777652 1 1345555555543 4578999999999999999
Q ss_pred CHHHHHHHHHHhhcchhHHhcCCCCCCcccCHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCceEechhh
Q psy8969 527 VAEEKVAIAAQYLIPQAMKESGLSPEQITLEPSAIQVLIKNYCRESGVRNLQKHIEKVTRKVALTIVKKESDKVTVTNDN 606 (1230)
Q Consensus 527 ~~~e~~~i~~~~l~~~~~~~~gl~~~~i~~~~~~~~~li~~~~~e~gvR~l~~~i~~i~r~~~~~~~~~~~~~~~i~~~~ 606 (1230)
+..+....+.+.+ ++ +.+.++++++..+++. -++++|.+...++++.-. . + .. .||.++
T Consensus 143 ~~~~l~~~l~~~~-----~~-----~g~~i~~~a~~~l~~~--~~gdl~~~~~elekl~l~-----~-~-~~--~It~e~ 201 (343)
T 1jr3_D 143 EQAQLPRWVAARA-----KQ-----LNLELDDAANQVLCYC--YEGNLLALAQALERLSLL-----W-P-DG--KLTLPR 201 (343)
T ss_dssp CTTHHHHHHHHHH-----HH-----TTCEECHHHHHHHHHS--STTCHHHHHHHHHHHHHH-----C-T-TC--EECHHH
T ss_pred CHHHHHHHHHHHH-----HH-----cCCCCCHHHHHHHHHH--hchHHHHHHHHHHHHHHh-----c-C-CC--CCCHHH
Confidence 9888877766544 33 3567899999999865 477899999998886532 1 1 11 589999
Q ss_pred hhhhcCC
Q psy8969 607 LSDFVGK 613 (1230)
Q Consensus 607 ~~~~~~~ 613 (1230)
|.++++.
T Consensus 202 V~~~~~~ 208 (343)
T 1jr3_D 202 VEQAVND 208 (343)
T ss_dssp HHHHHHH
T ss_pred HHHHHhh
Confidence 8887763
No 422
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.41 E-value=7.7e-08 Score=72.40 Aligned_cols=33 Identities=27% Similarity=0.599 Sum_probs=17.0
Q ss_pred cccCCCCEeecccccCccccchhhHHHHhhhccCc
Q psy8969 1188 THTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTDE 1222 (1230)
Q Consensus 1188 tHTGEKPy~C~~e~CGKsF~~ks~LkrH~R~HtGE 1222 (1230)
.|++++||.|. .|++.|.++.+|.+|+++|++|
T Consensus 3 ~h~~~k~~~C~--~C~k~f~~~~~l~~H~~~H~~~ 35 (36)
T 2elv_A 3 SGSSGLLYDCH--ICERKFKNELDRDRHMLVHGDK 35 (36)
T ss_dssp CSCCCCCEECS--SSCCEESSHHHHHHHHTTTSTT
T ss_pred CCCCCCCeECC--CCCCccCCHHHHHHHHHHhcCC
Confidence 44555555552 4555555555555555555544
No 423
>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}
Probab=98.41 E-value=5.8e-08 Score=73.87 Aligned_cols=34 Identities=29% Similarity=0.473 Sum_probs=18.9
Q ss_pred ccCCCCEeecccccCccccchhhHHHHhhhccCc
Q psy8969 1189 HTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTDE 1222 (1230)
Q Consensus 1189 HTGEKPy~C~~e~CGKsF~~ks~LkrH~R~HtGE 1222 (1230)
|++++||.|..+.|||.|.++++|.+|+++|+||
T Consensus 3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~e 36 (37)
T 1va1_A 3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGE 36 (37)
T ss_dssp SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTT
T ss_pred CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence 5555666663112666666666666666666555
No 424
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.40 E-value=1.2e-07 Score=71.36 Aligned_cols=35 Identities=26% Similarity=0.468 Sum_probs=32.5
Q ss_pred cccCCCCcccCCcccccccccCchhhhhhcccccCCC
Q psy8969 1157 RIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEK 1193 (1230)
Q Consensus 1157 R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEK 1193 (1230)
+.|++++||+|+ .|+++|.+++.|.+|+++|++++
T Consensus 2 ~~h~~~k~~~C~--~C~k~f~~~~~l~~H~~~H~~~k 36 (36)
T 2elv_A 2 SSGSSGLLYDCH--ICERKFKNELDRDRHMLVHGDKW 36 (36)
T ss_dssp CCSCCCCCEECS--SSCCEESSHHHHHHHHTTTSTTC
T ss_pred CCCCCCCCeECC--CCCCccCCHHHHHHHHHHhcCCC
Confidence 579999999995 59999999999999999999985
No 425
>2qgz_A Helicase loader, putative primosome component; structural genomics, PSI-2, protein structure initiative; 2.40A {Streptococcus pyogenes serotype M3}
Probab=98.39 E-value=2.3e-07 Score=105.75 Aligned_cols=89 Identities=20% Similarity=0.372 Sum_probs=51.0
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCceEEEeCCCCCCchHHHHHHHHHhC----CCeEEEecCCcchhHHHhhccccccccCc
Q psy8969 360 EDVKKRILEFIAVSQLKGTTQGKILCFYGPPGVGKTSIAKSIARALN----REYFRFSVGGMSDVAEIKGHRRTYVGAMP 435 (1230)
Q Consensus 360 ~~vK~~i~e~l~~~~~~~~~~~~~llL~GPPG~GKTslak~iA~~l~----~~~~~~~~~~~~d~~~i~g~~~~~~g~~~ 435 (1230)
..+.+.+.+|+... +...+..|+|+||||||||+||.+||..+. .+++.+++..+.+ ++.+... -|..
T Consensus 134 ~~~~~~~~~~i~~~---~~~~~~~lll~G~~GtGKT~La~aia~~~~~~~g~~v~~~~~~~l~~--~l~~~~~--~~~~- 205 (308)
T 2qgz_A 134 MEAFSAILDFVEQY---PSAEQKGLYLYGDMGIGKSYLLAAMAHELSEKKGVSTTLLHFPSFAI--DVKNAIS--NGSV- 205 (308)
T ss_dssp HHHHHHHHHHHHHC---SCSSCCEEEEECSTTSSHHHHHHHHHHHHHHHSCCCEEEEEHHHHHH--HHHCCCC-------
T ss_pred HHHHHHHHHHHHhc---cccCCceEEEECCCCCCHHHHHHHHHHHHHHhcCCcEEEEEHHHHHH--HHHHHhc--cchH-
Confidence 45555666666422 112357899999999999999999999765 5665565432211 2221110 0111
Q ss_pred hhHHHHHHhhcCCCCEEEEeccccc
Q psy8969 436 GKVIQCMKKTKTENPLVLIDEVDKI 460 (1230)
Q Consensus 436 g~i~~~~~~~~~~~pvillDEIDk~ 460 (1230)
..++..+. ..+|||||||+..
T Consensus 206 ~~~~~~~~----~~~lLiiDdig~~ 226 (308)
T 2qgz_A 206 KEEIDAVK----NVPVLILDDIGAE 226 (308)
T ss_dssp CCTTHHHH----TSSEEEEETCCC-
T ss_pred HHHHHHhc----CCCEEEEcCCCCC
Confidence 11222222 3579999999764
No 426
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.38 E-value=1.7e-07 Score=70.51 Aligned_cols=33 Identities=24% Similarity=0.744 Sum_probs=20.2
Q ss_pred cccCCCCEeecccccCccccchhhHHHHhhhccCc
Q psy8969 1188 THTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTDE 1222 (1230)
Q Consensus 1188 tHTGEKPy~C~~e~CGKsF~~ks~LkrH~R~HtGE 1222 (1230)
+|++++||+|. +|++.|.++.+|.+|+++|+++
T Consensus 3 ~h~~~k~~~C~--~C~k~f~~~~~l~~H~~~H~~~ 35 (36)
T 2elq_A 3 SGSSGKPFKCS--LCEYATRSKSNLKAHMNRHSTE 35 (36)
T ss_dssp SSCCCCSEECS--SSSCEESCHHHHHHHHHHSSTT
T ss_pred CCCCCCCccCC--CCCchhCCHHHHHHHHHHhccC
Confidence 45666666663 4666666666666666666654
No 427
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.38 E-value=1.6e-07 Score=70.38 Aligned_cols=33 Identities=36% Similarity=0.719 Sum_probs=22.0
Q ss_pred cccCCCCEeecccccCccccchhhHHHHhhhccCc
Q psy8969 1188 THTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTDE 1222 (1230)
Q Consensus 1188 tHTGEKPy~C~~e~CGKsF~~ks~LkrH~R~HtGE 1222 (1230)
+|++++||.|. .|++.|.++.+|.+|+++|++|
T Consensus 3 ~h~~~k~~~C~--~C~k~f~~~~~l~~H~~~H~~~ 35 (36)
T 2elt_A 3 SGSSGKPYKCP--QCSYASAIKANLNVHLRKHTGE 35 (36)
T ss_dssp CSCCCCSEECS--SSSCEESSHHHHHHHHHHHTCC
T ss_pred CCCCCCCCCCC--CCCcccCCHHHHHHHHHHccCC
Confidence 56666666663 5666666666666666666665
No 428
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1
Probab=98.37 E-value=7.5e-08 Score=71.39 Aligned_cols=33 Identities=27% Similarity=0.383 Sum_probs=27.6
Q ss_pred CcccCCcccccccccCchhhhhhcccccCCCCEee
Q psy8969 1163 RPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 1197 (1230)
Q Consensus 1163 KPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy~C 1197 (1230)
|||+|+ .|+++|.+++.|..|+++|+|++||.+
T Consensus 1 kp~~C~--~C~k~F~~~~~L~~H~~~H~~~~~~~r 33 (33)
T 1rim_A 1 YKFACP--ECPKRFMRSDHLSKHITLHELLGEERR 33 (33)
T ss_dssp CCCCCS--SSCCCCSSHHHHHHHHHHHTTTCCCCC
T ss_pred CcccCC--CCCchhCCHHHHHHHHHHhCCCCCCCC
Confidence 688885 589999888889999888888888864
No 429
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.37 E-value=1e-07 Score=71.74 Aligned_cols=35 Identities=37% Similarity=0.623 Sum_probs=29.8
Q ss_pred cccCCCCcccCCcccccccccCchhhhhhcccccCCC
Q psy8969 1157 RIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEK 1193 (1230)
Q Consensus 1157 R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEK 1193 (1230)
+.|++++||+|+ .|++.|.+++.|.+|+++|++++
T Consensus 2 ~~h~~~k~~~C~--~C~k~f~~~~~l~~H~~~H~~~k 36 (36)
T 2elq_A 2 SSGSSGKPFKCS--LCEYATRSKSNLKAHMNRHSTEK 36 (36)
T ss_dssp CSSCCCCSEECS--SSSCEESCHHHHHHHHHHSSTTC
T ss_pred CCCCCCCCccCC--CCCchhCCHHHHHHHHHHhccCC
Confidence 468899999995 59999999999999999998875
No 430
>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=98.35 E-value=1.9e-07 Score=71.14 Aligned_cols=37 Identities=22% Similarity=0.530 Sum_probs=33.1
Q ss_pred ccCCCCEeecccccCccccchhhHHHHhhhccCcccc
Q psy8969 1189 HTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTDEFQM 1225 (1230)
Q Consensus 1189 HTGEKPy~C~~e~CGKsF~~ks~LkrH~R~HtGE~~~ 1225 (1230)
|+|++||.|..+.||++|.++.+|++|+++|++++.+
T Consensus 1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~ 37 (38)
T 1bhi_A 1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF 37 (38)
T ss_dssp CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence 7899999995225999999999999999999999876
No 431
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.33 E-value=1.3e-07 Score=70.96 Aligned_cols=35 Identities=43% Similarity=0.738 Sum_probs=29.6
Q ss_pred cccCCCCcccCCcccccccccCchhhhhhcccccCCC
Q psy8969 1157 RIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEK 1193 (1230)
Q Consensus 1157 R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEK 1193 (1230)
.+|++++||+|+ .|++.|.+++.|.+|+++|++++
T Consensus 2 ~~h~~~k~~~C~--~C~k~f~~~~~l~~H~~~H~~~k 36 (36)
T 2elt_A 2 SSGSSGKPYKCP--QCSYASAIKANLNVHLRKHTGEK 36 (36)
T ss_dssp CCSCCCCSEECS--SSSCEESSHHHHHHHHHHHTCCC
T ss_pred CCCCCCCCCCCC--CCCcccCCHHHHHHHHHHccCCC
Confidence 368889999995 59999999999999999998875
No 432
>2qen_A Walker-type ATPase; unknown function; HET: ADP; 2.25A {Pyrococcus abyssi}
Probab=98.32 E-value=1.6e-06 Score=99.17 Aligned_cols=162 Identities=15% Similarity=0.169 Sum_probs=91.9
Q ss_pred ccccChHHHHHHHHHHHHHhhhcCCCCCceEEEeCCCCCCchHHHHHHHHHhCCCeEEEecCCcc------hhHHHhh-c
Q psy8969 354 DDHYGMEDVKKRILEFIAVSQLKGTTQGKILCFYGPPGVGKTSIAKSIARALNREYFRFSVGGMS------DVAEIKG-H 426 (1230)
Q Consensus 354 ~d~~G~~~vK~~i~e~l~~~~~~~~~~~~~llL~GPPG~GKTslak~iA~~l~~~~~~~~~~~~~------d~~~i~g-~ 426 (1230)
+..+|-++..+.|.+.+.. ++.++++||+|+|||+|++.+++.++ .+.+++.+.. +...+.. .
T Consensus 12 ~~~~gR~~el~~L~~~l~~--------~~~v~i~G~~G~GKT~Ll~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l 81 (350)
T 2qen_A 12 EDIFDREEESRKLEESLEN--------YPLTLLLGIRRVGKSSLLRAFLNERP--GILIDCRELYAERGHITREELIKEL 81 (350)
T ss_dssp GGSCSCHHHHHHHHHHHHH--------CSEEEEECCTTSSHHHHHHHHHHHSS--EEEEEHHHHHHTTTCBCHHHHHHHH
T ss_pred HhcCChHHHHHHHHHHHhc--------CCeEEEECCCcCCHHHHHHHHHHHcC--cEEEEeecccccccCCCHHHHHHHH
Confidence 4689999988888887742 26899999999999999999999986 5566654321 1111100 0
Q ss_pred ccc---------cc-------c-------cCchhHHHHHHhh-cC-CCCEEEEecccccCCCCCCChhhHHHhhcChhhh
Q psy8969 427 RRT---------YV-------G-------AMPGKVIQCMKKT-KT-ENPLVLIDEVDKIGKGYSGDPASALLEMLDPEQN 481 (1230)
Q Consensus 427 ~~~---------~~-------g-------~~~g~i~~~~~~~-~~-~~pvillDEIDk~~~~~~~~~~~all~~ld~~q~ 481 (1230)
.+. .. | .....+...+... .. ...||+|||++.+... .......++..|.
T Consensus 82 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~vlvlDe~~~~~~~-~~~~~~~~~~~L~---- 156 (350)
T 2qen_A 82 QSTISPFQKFQSKFKISLNLKFLTLEPRKLSLREVFRELNDLGEELGEFIVAFDEAQYLRFY-GSRGGKELLALFA---- 156 (350)
T ss_dssp HHHSCSHHHHHHHHTCCCCCGGGTSCGGGCCHHHHHHHHHHHHHHHSCEEEEEETGGGGGGB-TTTTTHHHHHHHH----
T ss_pred HHHHHHHHhHhhhceeEEEecceeeccccchHHHHHHHHHHHHhccCCEEEEEeCHHHHhcc-CccchhhHHHHHH----
Confidence 000 00 0 1112233333321 11 2447789999987430 0000112222221
Q ss_pred hhhhhhccCccccCCceEEEEecCCC---------CCCCHhhhccc-ceeecCCCCHHHHHHHHHHh
Q psy8969 482 ANFLDHYLDVPVDLSRVLFICTANVI---------DTIPEPLRDRM-EMIDVSGYVAEEKVAIAAQY 538 (1230)
Q Consensus 482 ~~f~d~~~~~~~d~s~v~~I~TaN~~---------~~I~~~L~~R~-~~i~~~~~~~~e~~~i~~~~ 538 (1230)
.+++. ..++.+|+|+... .....++..|. ..+.+.+++.+|...++.+.
T Consensus 157 -~~~~~-------~~~~~~il~g~~~~~l~~~l~~~~~~~~l~~~~~~~i~l~pl~~~e~~~~l~~~ 215 (350)
T 2qen_A 157 -YAYDS-------LPNLKIILTGSEVGLLHDFLKITDYESPLYGRIAGEVLVKPFDKDTSVEFLKRG 215 (350)
T ss_dssp -HHHHH-------CTTEEEEEEESSHHHHHHHHCTTCTTSTTTTCCCEEEECCCCCHHHHHHHHHHH
T ss_pred -HHHHh-------cCCeEEEEECCcHHHHHHHHhhcCCCCccccCccceeeCCCCCHHHHHHHHHHH
Confidence 11111 1367777765532 23345566665 48999999999988877653
No 433
>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}
Probab=98.30 E-value=2.6e-07 Score=70.20 Aligned_cols=36 Identities=28% Similarity=0.496 Sum_probs=32.2
Q ss_pred ccCCCCcccCCcccccccccCchhhhhhcccccCCC
Q psy8969 1158 IHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEK 1193 (1230)
Q Consensus 1158 ~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEK 1193 (1230)
.|+|++||.|++..|+|+|.+++.|++|+++|+|++
T Consensus 2 ~~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek 37 (37)
T 1va1_A 2 DPGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER 37 (37)
T ss_dssp CSSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence 489999999952259999999999999999999985
No 434
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}
Probab=98.30 E-value=1.7e-07 Score=76.00 Aligned_cols=35 Identities=23% Similarity=0.464 Sum_probs=22.1
Q ss_pred ccCCCCcccCCcccccccccCchhhhhhcc-cccCCCC
Q psy8969 1158 IHSGIRPYKCPVEYCEKAFSTQYSRKAHIR-THTGEKP 1194 (1230)
Q Consensus 1158 ~HTGEKPykCpve~CgKsF~~ks~Lk~H~R-tHTGEKP 1194 (1230)
+|+|+|||+|+ .|+|+|.+++.|++|++ +|+|+.+
T Consensus 1 ~Ht~~kp~~C~--~C~k~F~~~~~L~~H~~~~H~~e~~ 36 (48)
T 3iuf_A 1 GEDRDKPYACD--ICGKRYKNRPGLSYHYAHSHLAEEE 36 (48)
T ss_dssp -CTTTSCEECT--TTCCEESSHHHHHHHHHHSSCC---
T ss_pred CCCCCcCEECC--CcCcccCCHHHHHHHhhhhcCCCCC
Confidence 46777777774 47777777777777777 7776654
No 435
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.29 E-value=2.1e-07 Score=69.79 Aligned_cols=32 Identities=34% Similarity=0.649 Sum_probs=14.7
Q ss_pred ccCCCCEeecccccCccccchhhHHHHhhhccCc
Q psy8969 1189 HTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTDE 1222 (1230)
Q Consensus 1189 HTGEKPy~C~~e~CGKsF~~ks~LkrH~R~HtGE 1222 (1230)
|++++||.|. +|++.|.++.+|.+|+++|++|
T Consensus 4 h~~~~~~~C~--~C~k~f~~~~~l~~H~~~H~~e 35 (36)
T 2elr_A 4 GSSGKTHLCD--MCGKKFKSKGTLKSHKLLHTAD 35 (36)
T ss_dssp CCCCSSCBCT--TTCCBCSSHHHHHHHHHHHSSC
T ss_pred CCCCCCeecC--cCCCCcCchHHHHHHHHHhcCC
Confidence 4444444442 3444444444444444444443
No 436
>3cmw_A Protein RECA, recombinase A; homologous recombination, recombination/DNA complex; HET: DNA ADP; 2.80A {Escherichia coli} PDB: 3cmt_A* 3cmx_A* 3cmv_A*
Probab=98.29 E-value=1.1e-06 Score=118.20 Aligned_cols=116 Identities=16% Similarity=0.203 Sum_probs=73.4
Q ss_pred HhhhhcccccChHHHHHHHHHHHHHhhh-----------------------------------cCCCCCceEEEeCCCCC
Q psy8969 348 AAKILDDDHYGMEDVKKRILEFIAVSQL-----------------------------------KGTTQGKILCFYGPPGV 392 (1230)
Q Consensus 348 ~~~~l~~d~~G~~~vK~~i~e~l~~~~~-----------------------------------~~~~~~~~llL~GPPG~ 392 (1230)
+..+=++|+.|++++|...++.+.+... -|.++|+++++||||||
T Consensus 1014 ~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tG~~glD~~lg~GG~p~g~~~l~~G~~g~ 1093 (1706)
T 3cmw_A 1014 ASGSSTGSMSAIDENKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTGSLSLDIALGAGGLPMGRIVEIYGPESS 1093 (1706)
T ss_dssp ----------CTTHHHHHHHHHHHHHHHHHHCGGGSEEGGGCGGGSCCEECCSCHHHHHHTSSSSEETTSEEEEECSTTS
T ss_pred cCCceeeecCCccHHHHHHHHHHHHHHhhccCcccchhchhhhhccccccccCchhHHHHhccCCCCCCCEEEEEcCCCC
Confidence 3446778999999999998877654321 11346777999999999
Q ss_pred CchHHHHHHHHHh---CCCeEEEecCCcchhHHH--hh-cccccccc----CchhHHHHHHhhcCCC-CEEEEecccccC
Q psy8969 393 GKTSIAKSIARAL---NREYFRFSVGGMSDVAEI--KG-HRRTYVGA----MPGKVIQCMKKTKTEN-PLVLIDEVDKIG 461 (1230)
Q Consensus 393 GKTslak~iA~~l---~~~~~~~~~~~~~d~~~i--~g-~~~~~~g~----~~g~i~~~~~~~~~~~-pvillDEIDk~~ 461 (1230)
|||+||+++|.+. |-|-+.|++.+..+..-- -| .-..|+++ .+..+...+.+++... .+|++||||.+.
T Consensus 1094 GKT~la~~~~~~~~~~g~~~~fi~~~~~~~~~~~~~~G~d~~~~~~~~~~~~e~~l~~~~~~ar~~~~~~i~~d~~~al~ 1173 (1706)
T 3cmw_A 1094 GKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYARKLGVDIDNLLCSQPDTGEQALEICDALARSGAVDVIVVDSVAALT 1173 (1706)
T ss_dssp SHHHHHHHHHHHHHHTTCCEEEECTTSCCCHHHHHHTTCCGGGCEEECCSSHHHHHHHHHHHHHHTCCSEEEESCGGGCC
T ss_pred ChHHHHHHHHHHhhhcCCceeEEEcccchHHHHHHHhCCCHHHHhhccccchHHHHHHHHHHHHhcCCeEEEeCchHhcC
Confidence 9999999999865 456666776665432110 11 11457777 4556777777666554 488999999887
Q ss_pred CC
Q psy8969 462 KG 463 (1230)
Q Consensus 462 ~~ 463 (1230)
+.
T Consensus 1174 ~~ 1175 (1706)
T 3cmw_A 1174 PK 1175 (1706)
T ss_dssp CH
T ss_pred cc
Confidence 54
No 437
>1ye8_A Protein THEP1, hypothetical UPF0334 kinase-like protein AQ_1292; mixed alpha-beta protein, rossman fold, signaling protein, transferase; 1.40A {Aquifex aeolicus} SCOP: c.37.1.11
Probab=98.29 E-value=8.9e-07 Score=92.72 Aligned_cols=27 Identities=37% Similarity=0.637 Sum_probs=24.0
Q ss_pred eEEEeCCCCCCchHHHHHHHHHhCCCe
Q psy8969 383 ILCFYGPPGVGKTSIAKSIARALNREY 409 (1230)
Q Consensus 383 ~llL~GPPG~GKTslak~iA~~l~~~~ 409 (1230)
.++|+||+|+|||||++.|+..++..+
T Consensus 2 ~i~l~G~nGsGKTTLl~~l~g~l~i~~ 28 (178)
T 1ye8_A 2 KIIITGEPGVGKTTLVKKIVERLGKRA 28 (178)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHGGGE
T ss_pred EEEEECCCCCCHHHHHHHHHHHhCCcC
Confidence 478999999999999999999997544
No 438
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}
Probab=98.28 E-value=2.6e-07 Score=74.80 Aligned_cols=35 Identities=31% Similarity=0.637 Sum_probs=29.8
Q ss_pred cccCCCCEeecccccCccccchhhHHHHhh-hccCccc
Q psy8969 1188 THTGEKPYRCAHEFCSKSFKTSGDLQKHVR-THTDEFQ 1224 (1230)
Q Consensus 1188 tHTGEKPy~C~~e~CGKsF~~ks~LkrH~R-~HtGE~~ 1224 (1230)
+|+|++||.|. +|||+|.++.+|.+|++ +|+||..
T Consensus 1 ~Ht~~kp~~C~--~C~k~F~~~~~L~~H~~~~H~~e~~ 36 (48)
T 3iuf_A 1 GEDRDKPYACD--ICGKRYKNRPGLSYHYAHSHLAEEE 36 (48)
T ss_dssp -CTTTSCEECT--TTCCEESSHHHHHHHHHHSSCC---
T ss_pred CCCCCcCEECC--CcCcccCCHHHHHHHhhhhcCCCCC
Confidence 69999999994 79999999999999999 9998854
No 439
>2r2a_A Uncharacterized protein; zonular occludens toxin, structural genomics, APC84050.2, PS protein structure initiative; HET: MSE; 1.82A {Neisseria meningitidis MC58}
Probab=98.28 E-value=1e-06 Score=93.91 Aligned_cols=127 Identities=15% Similarity=0.203 Sum_probs=70.6
Q ss_pred CCceEEEeCCCCCCchHHHHHHHHH--------hC-CCeEEEecCCcchhHHH-hhccccc---ccc--CchhHHHHHHh
Q psy8969 380 QGKILCFYGPPGVGKTSIAKSIARA--------LN-REYFRFSVGGMSDVAEI-KGHRRTY---VGA--MPGKVIQCMKK 444 (1230)
Q Consensus 380 ~~~~llL~GPPG~GKTslak~iA~~--------l~-~~~~~~~~~~~~d~~~i-~g~~~~~---~g~--~~g~i~~~~~~ 444 (1230)
-+.+.|+.||||+|||++|..++.. .| ++.+..++.|+...... .+..+.+ .++ .+..+...+..
T Consensus 4 ~~mi~l~tG~pGsGKT~~a~~~~~~~~~~~~~~~g~r~v~~~~~~gL~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~ 83 (199)
T 2r2a_A 4 MAEICLITGTPGSGKTLKMVSMMANDEMFKPDENGIRRKVFTNIKGLKIPHTYIETDAKKLPKSTDEQLSAHDMYEWIKK 83 (199)
T ss_dssp CCCEEEEECCTTSSHHHHHHHHHHHCGGGSCCTTSCCCCEEECCTTBCSCCEEEECCTTTCSSCCSSCEEGGGHHHHTTS
T ss_pred ceeEEEEEeCCCCCHHHHHHHHHHHHHhhcccccCceEEEEecCCCccccccccchhhhhccccCcccccHHHHHHHhhc
Confidence 3468899999999999999886544 34 77766666655421100 0000111 111 12233222222
Q ss_pred hcCCCCEEEEecccccCCCC-CCChhhHHHhhcChhhhhhhhhhccCccccCCceEEEEecCCCCCCCHhhhcccce
Q psy8969 445 TKTENPLVLIDEVDKIGKGY-SGDPASALLEMLDPEQNANFLDHYLDVPVDLSRVLFICTANVIDTIPEPLRDRMEM 520 (1230)
Q Consensus 445 ~~~~~pvillDEIDk~~~~~-~~~~~~all~~ld~~q~~~f~d~~~~~~~d~s~v~~I~TaN~~~~I~~~L~~R~~~ 520 (1230)
+...++||+|||++.+.+.+ .+-....++..|.... -..+-+|++++..+.|+.+|++|++.
T Consensus 84 ~~~~~~vliIDEAq~l~~~~~~~~e~~rll~~l~~~r--------------~~~~~iil~tq~~~~l~~~lr~ri~~ 146 (199)
T 2r2a_A 84 PENIGSIVIVDEAQDVWPARSAGSKIPENVQWLNTHR--------------HQGIDIFVLTQGPKLLDQNLRTLVRK 146 (199)
T ss_dssp GGGTTCEEEETTGGGTSBCCCTTCCCCHHHHGGGGTT--------------TTTCEEEEEESCGGGBCHHHHTTEEE
T ss_pred cccCceEEEEEChhhhccCccccchhHHHHHHHHhcC--------------cCCeEEEEECCCHHHHhHHHHHHhhe
Confidence 33457899999999984322 1111112333222110 12345567778899999999999985
No 440
>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}
Probab=98.27 E-value=1.1e-07 Score=69.77 Aligned_cols=31 Identities=26% Similarity=0.426 Sum_probs=28.2
Q ss_pred CcccCCcccccccccCchhhhhhcccccCCCCE
Q psy8969 1163 RPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPY 1195 (1230)
Q Consensus 1163 KPykCpve~CgKsF~~ks~Lk~H~RtHTGEKPy 1195 (1230)
|||+|+ .|+|+|.+++.|.+|+++|++++||
T Consensus 1 kp~~C~--~C~k~f~~~~~L~~H~~~H~~~kp~ 31 (32)
T 2kfq_A 1 YAFACP--ACPKRFMRSDALSKHIKTAFIVVAL 31 (32)
T ss_dssp CCSSSS--SSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred CCCCCC--CCCcccCCHHHHHHHHHHHccCCCC
Confidence 689995 5999999999999999999999987
No 441
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.26 E-value=3.5e-07 Score=68.56 Aligned_cols=35 Identities=26% Similarity=0.363 Sum_probs=32.2
Q ss_pred cccCCCCcccCCcccccccccCchhhhhhcccccCCC
Q psy8969 1157 RIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEK 1193 (1230)
Q Consensus 1157 R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEK 1193 (1230)
..|++++||+|+ .|++.|.+++.|.+|+++|++|+
T Consensus 2 ~~h~~~~~~~C~--~C~k~f~~~~~l~~H~~~H~~ek 36 (36)
T 2elr_A 2 SSGSSGKTHLCD--MCGKKFKSKGTLKSHKLLHTADG 36 (36)
T ss_dssp CCCCCCSSCBCT--TTCCBCSSHHHHHHHHHHHSSCC
T ss_pred CCCCCCCCeecC--cCCCCcCchHHHHHHHHHhcCCC
Confidence 368999999995 59999999999999999999985
No 442
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.23 E-value=5.3e-07 Score=67.70 Aligned_cols=33 Identities=39% Similarity=0.784 Sum_probs=20.4
Q ss_pred cccCCCCEeecccccCccccchhhHHHHhhhccCc
Q psy8969 1188 THTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTDE 1222 (1230)
Q Consensus 1188 tHTGEKPy~C~~e~CGKsF~~ks~LkrH~R~HtGE 1222 (1230)
.|++++||.|. .|++.|.+..+|.+|+++|++|
T Consensus 3 ~~~~~k~~~C~--~C~k~f~~~~~l~~H~~~H~~~ 35 (36)
T 2els_A 3 SGSSGKIFTCE--YCNKVFKFKHSLQAHLRIHTNE 35 (36)
T ss_dssp TTSCCCCEECT--TTCCEESSHHHHHHHHHHHCCC
T ss_pred CCCCCCCEECC--CCCceeCCHHHHHHHHHHhCCC
Confidence 45566666663 4666666666666666666655
No 443
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.22 E-value=3.2e-07 Score=68.91 Aligned_cols=34 Identities=41% Similarity=0.700 Sum_probs=26.7
Q ss_pred ccCCCCcccCCcccccccccCchhhhhhcccccCCC
Q psy8969 1158 IHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEK 1193 (1230)
Q Consensus 1158 ~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEK 1193 (1230)
.|++++||+|+ .|++.|.+++.|.+|+++|++++
T Consensus 3 ~~~~~k~~~C~--~C~k~f~~~~~l~~H~~~H~~~k 36 (36)
T 2els_A 3 SGSSGKIFTCE--YCNKVFKFKHSLQAHLRIHTNEK 36 (36)
T ss_dssp TTSCCCCEECT--TTCCEESSHHHHHHHHHHHCCCC
T ss_pred CCCCCCCEECC--CCCceeCCHHHHHHHHHHhCCCC
Confidence 47778888884 58888888888888888888764
No 444
>2vhj_A Ntpase P4, P4; non- hydrolysable ATP analogue, hydrolase, virus dsRNA, molecular motor, packaging ATPase, hexameric helicase; HET: ADP; 1.80A {Pseudomonas phage PHI12} PDB: 2vhq_A* 1w44_A* 1w46_A* 1w47_A* 1w48_A* 1w49_A* 1w4a_A* 1w4b_A* 1w4c_A 2vht_A* 2vhu_A* 2vhc_A*
Probab=98.19 E-value=1.5e-06 Score=98.40 Aligned_cols=76 Identities=16% Similarity=0.214 Sum_probs=45.3
Q ss_pred CCCCCceEEEeCCCCCCchHHHHHHHHHhCCC--eEEEecCCcchhHHHhhccccccccCchhHHHHHHhhcCCCCEEEE
Q psy8969 377 GTTQGKILCFYGPPGVGKTSIAKSIARALNRE--YFRFSVGGMSDVAEIKGHRRTYVGAMPGKVIQCMKKTKTENPLVLI 454 (1230)
Q Consensus 377 ~~~~~~~llL~GPPG~GKTslak~iA~~l~~~--~~~~~~~~~~d~~~i~g~~~~~~g~~~g~i~~~~~~~~~~~pvill 454 (1230)
+..++.+++|+||||+|||+||..+|...|.+ |+.+......+ .+.......+...+......+ +|+|
T Consensus 119 Gi~~gsviLI~GpPGsGKTtLAlqlA~~~G~~VlyIs~~~eE~v~---------~~~~~le~~l~~i~~~l~~~~-LLVI 188 (331)
T 2vhj_A 119 HRYASGMVIVTGKGNSGKTPLVHALGEALGGKDKYATVRFGEPLS---------GYNTDFNVFVDDIARAMLQHR-VIVI 188 (331)
T ss_dssp EEEESEEEEEECSCSSSHHHHHHHHHHHHHTTSCCEEEEBSCSST---------TCBCCHHHHHHHHHHHHHHCS-EEEE
T ss_pred CCCCCcEEEEEcCCCCCHHHHHHHHHHhCCCCEEEEEecchhhhh---------hhhcCHHHHHHHHHHHHhhCC-EEEE
Confidence 44567788999999999999999999876654 65552222111 011111122111222222233 9999
Q ss_pred ecccccCC
Q psy8969 455 DEVDKIGK 462 (1230)
Q Consensus 455 DEIDk~~~ 462 (1230)
|||+.+..
T Consensus 189 DsI~aL~~ 196 (331)
T 2vhj_A 189 DSLKNVIG 196 (331)
T ss_dssp ECCTTTC-
T ss_pred eccccccc
Confidence 99999854
No 445
>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A
Probab=98.17 E-value=6.3e-07 Score=64.87 Aligned_cols=21 Identities=48% Similarity=0.757 Sum_probs=9.6
Q ss_pred ccccccCchhhhhhcccccCC
Q psy8969 1172 CEKAFSTQYSRKAHIRTHTGE 1192 (1230)
Q Consensus 1172 CgKsF~~ks~Lk~H~RtHTGE 1192 (1230)
|+++|.+++.|.+|+++|+|+
T Consensus 10 C~k~f~~~~~L~~H~~~H~~~ 30 (31)
T 1sp2_A 10 CGKRFTRSDELQRHKRTHTGE 30 (31)
T ss_dssp CCCBCSSHHHHHHHHTTTSCC
T ss_pred CCcccCCHhHHHHHHHHhcCC
Confidence 444444444444444444443
No 446
>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=98.07 E-value=1.4e-06 Score=63.38 Aligned_cols=21 Identities=29% Similarity=0.543 Sum_probs=9.7
Q ss_pred ccccccCchhhhhhcccccCC
Q psy8969 1172 CEKAFSTQYSRKAHIRTHTGE 1192 (1230)
Q Consensus 1172 CgKsF~~ks~Lk~H~RtHTGE 1192 (1230)
|+++|.+.+.|.+|+++|+|+
T Consensus 11 C~k~f~~~~~L~~H~~~H~~~ 31 (32)
T 1zfd_A 11 CDKAFVRNHDLIRHKKSHQEK 31 (32)
T ss_dssp CCCCBSSSHHHHHHHGGGTCC
T ss_pred CCCccCCHHHHHHHHHHccCC
Confidence 444444444444444444443
No 447
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=98.04 E-value=2.2e-05 Score=111.06 Aligned_cols=133 Identities=18% Similarity=0.232 Sum_probs=88.3
Q ss_pred ceEEEeCCCCCCchHHHHHHHHHhCCCeEEEecCCcchhHHHhhccccccccCchhHHHHHHhhcCCCCEEEEecccccC
Q psy8969 382 KILCFYGPPGVGKTSIAKSIARALNREYFRFSVGGMSDVAEIKGHRRTYVGAMPGKVIQCMKKTKTENPLVLIDEVDKIG 461 (1230)
Q Consensus 382 ~~llL~GPPG~GKTslak~iA~~l~~~~~~~~~~~~~d~~~i~g~~~~~~g~~~g~i~~~~~~~~~~~pvillDEIDk~~ 461 (1230)
.+.++.||+|||||.+++.+|+++|++++.++++.-.|...+ |++...+... ..-..+|||+++.
T Consensus 605 ~gg~~~GPaGtGKTet~k~La~~lgr~~~vfnC~~~~d~~~~------------g~i~~G~~~~---GaW~cfDEfNrl~ 669 (3245)
T 3vkg_A 605 MGGNPFGPAGTGKTETVKALGSQLGRFVLVFCCDEGFDLQAM------------SRIFVGLCQC---GAWGCFDEFNRLE 669 (3245)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHHTTCCEEEEECSSCCCHHHH------------HHHHHHHHHH---TCEEEEETTTSSC
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHhCCeEEEEeCCCCCCHHHH------------HHHHhhHhhc---CcEEEehhhhcCC
Confidence 345799999999999999999999999999998876664322 3343333333 3467899999973
Q ss_pred CCCCCChhhHHHhhcChhhhhhhhhh-----cc-CccccC-CceEEEEecCC----CCCCCHhhhcccceeecCCCCHHH
Q psy8969 462 KGYSGDPASALLEMLDPEQNANFLDH-----YL-DVPVDL-SRVLFICTANV----IDTIPEPLRDRMEMIDVSGYVAEE 530 (1230)
Q Consensus 462 ~~~~~~~~~all~~ld~~q~~~f~d~-----~~-~~~~d~-s~v~~I~TaN~----~~~I~~~L~~R~~~i~~~~~~~~e 530 (1230)
.+..+++.+.+..-|.. ..++ +. +..+.+ ..+.|++|.|+ ...+|++|++||..|.+..+..+.
T Consensus 670 ----~~vLSvv~~qi~~I~~a-~~~~~~~~~~~~G~~i~l~~~~~vfiTmNpgY~gr~eLP~nLk~lFr~v~m~~Pd~~~ 744 (3245)
T 3vkg_A 670 ----ERILSAVSQQIQTIQVA-LKENSKEVELLGGKNISLHQDMGIFVTMNPGYAGRSNLPDNLKKLFRSMAMIKPDREM 744 (3245)
T ss_dssp ----HHHHHHHHHHHHHHHHH-HHHTCSEECCC---CEECCTTCEEEECBCCCGGGCCCSCHHHHTTEEEEECCSCCHHH
T ss_pred ----HHHHHHHHHHHHHHHHH-HHcCCCeEEecCCCEEeecCCeEEEEEeCCCccCcccChHHHHhhcEEEEEeCCCHHH
Confidence 23456655544322211 1111 11 212222 25677888994 468999999999999988777666
Q ss_pred HHHH
Q psy8969 531 KVAI 534 (1230)
Q Consensus 531 ~~~i 534 (1230)
..+|
T Consensus 745 i~ei 748 (3245)
T 3vkg_A 745 IAQV 748 (3245)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5554
No 448
>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B
Probab=98.02 E-value=7.4e-07 Score=67.96 Aligned_cols=26 Identities=27% Similarity=0.350 Sum_probs=17.2
Q ss_pred cCCCCcccCCcccccccccCchhhhhhc
Q psy8969 1159 HSGIRPYKCPVEYCEKAFSTQYSRKAHI 1186 (1230)
Q Consensus 1159 HTGEKPykCpve~CgKsF~~ks~Lk~H~ 1186 (1230)
++|||||+|+ .|+|+|.++++|++|+
T Consensus 3 ~~gekp~~C~--~CgK~F~~~s~L~~H~ 28 (36)
T 1fv5_A 3 LLKPARFMCL--PCGIAFSSPSTLEAHQ 28 (36)
T ss_dssp SSSCCCCEET--TTTEECSCHHHHHHHH
T ss_pred CCCccCeECC--CCCCccCCHhHccCcC
Confidence 4566777773 4777777777776666
No 449
>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=98.01 E-value=2.4e-06 Score=74.40 Aligned_cols=37 Identities=16% Similarity=0.166 Sum_probs=30.8
Q ss_pred ccccCCCCcccCCcccccccccCchhhhhhcccccCCCC
Q psy8969 1156 LRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKP 1194 (1230)
Q Consensus 1156 ~R~HTGEKPykCpve~CgKsF~~ks~Lk~H~RtHTGEKP 1194 (1230)
...|+++|||+|+ .|+|+|.+++.|++|+++|++++.
T Consensus 5 ~~~~~~ekpy~C~--~CgK~F~~~s~L~~H~r~Htg~~~ 41 (66)
T 2epp_A 5 SSGLREAGILPCG--LCGKVFTDANRLRQHEAQHGVTSL 41 (66)
T ss_dssp SCSCCCCCCCCCT--TTCCCCSCHHHHHHHHHHHTTTSC
T ss_pred CCCCCCccCcCCC--CCCCccCCHHHHHhhhhhhCCCcc
Confidence 4568889999994 699999999999999999998753
No 450
>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=97.99 E-value=1.8e-06 Score=75.17 Aligned_cols=37 Identities=19% Similarity=0.255 Sum_probs=31.5
Q ss_pred ccCCCCCccCCCCCCCCCCchhhhccccccCCCCcccC
Q psy8969 1130 KSTSSENNVCPECKKTFSSAHHMKVHLRIHSGIRPYKC 1167 (1230)
Q Consensus 1130 ~~t~~kpy~C~~CgK~F~s~s~Lk~H~R~HTGEKPykC 1167 (1230)
.++.++||.|.+|+|.|.+.++|++|+|+|++++. .|
T Consensus 7 ~~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~~-~~ 43 (66)
T 2epp_A 7 GLREAGILPCGLCGKVFTDANRLRQHEAQHGVTSL-QL 43 (66)
T ss_dssp SCCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTSC-CC
T ss_pred CCCCccCcCCCCCCCccCCHHHHHhhhhhhCCCcc-cc
Confidence 36778999999999999999999999999998753 45
No 451
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=97.24 E-value=8.5e-07 Score=62.94 Aligned_cols=27 Identities=52% Similarity=0.908 Sum_probs=14.0
Q ss_pred cccCCcccccccccCchhhhhhcccccCC
Q psy8969 1164 PYKCPVEYCEKAFSTQYSRKAHIRTHTGE 1192 (1230)
Q Consensus 1164 PykCpve~CgKsF~~ks~Lk~H~RtHTGE 1192 (1230)
||+|+ .|+++|.+.+.|..|+++|+++
T Consensus 2 ~~~C~--~C~k~f~~~~~l~~H~~~H~~~ 28 (29)
T 2lvt_A 2 PCQCV--MCGKAFTQASSLIAHVRQHTGE 28 (29)
Confidence 45552 3555555555555555555544
No 452
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=97.98 E-value=1.8e-06 Score=60.96 Aligned_cols=28 Identities=43% Similarity=0.797 Sum_probs=15.2
Q ss_pred CcccCCcccccccccCchhhhhhcccccCC
Q psy8969 1163 RPYKCPVEYCEKAFSTQYSRKAHIRTHTGE 1192 (1230)
Q Consensus 1163 KPykCpve~CgKsF~~ks~Lk~H~RtHTGE 1192 (1230)
+||+|+ .|+++|.+.+.|..|+++|+++
T Consensus 1 k~~~C~--~C~~~f~~~~~l~~H~~~h~~~ 28 (29)
T 1ard_A 1 RSFVCE--VCTRAFARQEHLKRHYRSHTNE 28 (29)
T ss_dssp CCCBCT--TTCCBCSSHHHHHHHHHHHSCC
T ss_pred CCeECC--CCCcccCCHHHHHHHHHHhcCC
Confidence 355553 3555555555555555555554
No 453
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=97.98 E-value=2.1e-06 Score=60.96 Aligned_cols=28 Identities=14% Similarity=0.386 Sum_probs=13.3
Q ss_pred CccCCCCCCCCCCchhhhccccccCCCC
Q psy8969 1136 NNVCPECKKTFSSAHHMKVHLRIHSGIR 1163 (1230)
Q Consensus 1136 py~C~~CgK~F~s~s~Lk~H~R~HTGEK 1163 (1230)
+|.|+.||+.|...++|.+|+++|++++
T Consensus 2 ~~~C~~C~k~f~~~~~l~~H~~~h~~~~ 29 (30)
T 1klr_A 2 TYQCQYCEFRSADSSNLKTHIKTKHSKE 29 (30)
T ss_dssp CCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred CccCCCCCCccCCHHHHHHHHHHHccCC
Confidence 3444444444444444444444444443
No 454
>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=97.96 E-value=3e-06 Score=61.57 Aligned_cols=30 Identities=23% Similarity=0.462 Sum_probs=28.0
Q ss_pred CCCccCC--CCCCCCCCchhhhccccccCCCC
Q psy8969 1134 SENNVCP--ECKKTFSSAHHMKVHLRIHSGIR 1163 (1230)
Q Consensus 1134 ~kpy~C~--~CgK~F~s~s~Lk~H~R~HTGEK 1163 (1230)
++||.|+ .||+.|.+.++|.+|+++|+|++
T Consensus 1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~ 32 (32)
T 1zfd_A 1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEKA 32 (32)
T ss_dssp CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCCC
T ss_pred CCCCcCcCCCCCCccCCHHHHHHHHHHccCCC
Confidence 3689999 89999999999999999999985
No 455
>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A
Probab=97.96 E-value=2.6e-06 Score=61.50 Aligned_cols=29 Identities=28% Similarity=0.631 Sum_probs=27.2
Q ss_pred CCccCC--CCCCCCCCchhhhccccccCCCC
Q psy8969 1135 ENNVCP--ECKKTFSSAHHMKVHLRIHSGIR 1163 (1230)
Q Consensus 1135 kpy~C~--~CgK~F~s~s~Lk~H~R~HTGEK 1163 (1230)
+||.|+ .|||.|.+.++|.+|+++|+|+|
T Consensus 1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~k 31 (31)
T 1sp2_A 1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31 (31)
T ss_dssp CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred CCcCCcCCCCCcccCCHhHHHHHHHHhcCCC
Confidence 479998 99999999999999999999985
No 456
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=97.95 E-value=2.4e-06 Score=60.58 Aligned_cols=28 Identities=36% Similarity=0.941 Sum_probs=13.7
Q ss_pred CCEeecccccCccccchhhHHHHhhhccCc
Q psy8969 1193 KPYRCAHEFCSKSFKTSGDLQKHVRTHTDE 1222 (1230)
Q Consensus 1193 KPy~C~~e~CGKsF~~ks~LkrH~R~HtGE 1222 (1230)
+||.|. .||+.|.+..+|.+|+++|+|+
T Consensus 2 k~~~C~--~C~~~f~~~~~l~~H~~~h~~~ 29 (30)
T 2m0d_A 2 KPYQCD--YCGRSFSDPTSKMRHLETHDTD 29 (30)
T ss_dssp CCEECT--TTCCEESCHHHHHHHHHTTCCC
T ss_pred cCccCC--CCCcccCCHHHHHHHHHHhccC
Confidence 445552 3555555555555555555444
No 457
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}
Probab=97.17 E-value=1.2e-06 Score=62.38 Aligned_cols=28 Identities=39% Similarity=0.885 Sum_probs=16.4
Q ss_pred CcccCCcccccccccCchhhhhhcccccCC
Q psy8969 1163 RPYKCPVEYCEKAFSTQYSRKAHIRTHTGE 1192 (1230)
Q Consensus 1163 KPykCpve~CgKsF~~ks~Lk~H~RtHTGE 1192 (1230)
+||+|+ .|+++|.+.+.|.+|+++|+++
T Consensus 2 k~~~C~--~C~k~f~~~~~l~~H~~~h~~~ 29 (30)
T 2lvr_A 2 KPYVCI--HCQRQFADPGALQRHVRIHTGE 29 (30)
Confidence 556663 3666666666666666666554
No 458
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=97.93 E-value=4.2e-06 Score=59.31 Aligned_cols=30 Identities=40% Similarity=0.974 Sum_probs=27.7
Q ss_pred CCcccCCcccccccccCchhhhhhcccccCCC
Q psy8969 1162 IRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEK 1193 (1230)
Q Consensus 1162 EKPykCpve~CgKsF~~ks~Lk~H~RtHTGEK 1193 (1230)
++||.|+ .|+++|.+.+.|..|+++|+|++
T Consensus 1 ~k~~~C~--~C~~~f~~~~~l~~H~~~h~~~k 30 (30)
T 2m0d_A 1 MKPYQCD--YCGRSFSDPTSKMRHLETHDTDK 30 (30)
T ss_dssp CCCEECT--TTCCEESCHHHHHHHHHTTCCCC
T ss_pred CcCccCC--CCCcccCCHHHHHHHHHHhccCC
Confidence 6899995 59999999999999999999985
No 459
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=97.92 E-value=2.2e-06 Score=60.28 Aligned_cols=28 Identities=36% Similarity=0.753 Sum_probs=15.1
Q ss_pred CcccCCcccccccccCchhhhhhcccccCC
Q psy8969 1163 RPYKCPVEYCEKAFSTQYSRKAHIRTHTGE 1192 (1230)
Q Consensus 1163 KPykCpve~CgKsF~~ks~Lk~H~RtHTGE 1192 (1230)
|||+|+ .|+++|.+.+.|..|+++|+++
T Consensus 1 k~~~C~--~C~~~f~~~~~l~~H~~~h~~~ 28 (29)
T 2m0e_A 1 KEHKCP--HCDKKFNQVGNLKAHLKIHIAD 28 (29)
T ss_dssp CCCCCS--SCCCCCCTTTHHHHHHHHHHSC
T ss_pred CCCcCC--CCCcccCCHHHHHHHHHHhccC
Confidence 355553 3555555555555555555554
No 460
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=97.89 E-value=3.7e-06 Score=59.37 Aligned_cols=22 Identities=32% Similarity=0.545 Sum_probs=10.2
Q ss_pred ccCccccchhhHHHHhhhccCc
Q psy8969 1201 FCSKSFKTSGDLQKHVRTHTDE 1222 (1230)
Q Consensus 1201 ~CGKsF~~ks~LkrH~R~HtGE 1222 (1230)
.||+.|.+..+|..|+++|+||
T Consensus 7 ~C~k~f~~~~~l~~H~~~H~~~ 28 (29)
T 1rik_A 7 ECPKRFMRSDHLTLHILLHENK 28 (29)
T ss_dssp SSSCEESCSHHHHHHHTGGGSC
T ss_pred CCCchhCCHHHHHHHHHHhcCC
Confidence 3444444444444444444443
No 461
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=97.88 E-value=5.8e-06 Score=58.32 Aligned_cols=29 Identities=31% Similarity=0.561 Sum_probs=26.9
Q ss_pred CcccCCcccccccccCchhhhhhcccccCCC
Q psy8969 1163 RPYKCPVEYCEKAFSTQYSRKAHIRTHTGEK 1193 (1230)
Q Consensus 1163 KPykCpve~CgKsF~~ks~Lk~H~RtHTGEK 1193 (1230)
|||.|+ .|++.|.+.+.|..|+++|+|++
T Consensus 1 k~~~C~--~C~k~f~~~~~l~~H~~~H~~~k 29 (29)
T 1rik_A 1 YKFACP--ECPKRFMRSDHLTLHILLHENKK 29 (29)
T ss_dssp CCEECS--SSSCEESCSHHHHHHHTGGGSCC
T ss_pred CCccCC--CCCchhCCHHHHHHHHHHhcCCC
Confidence 699995 69999999999999999999985
No 462
>1svm_A Large T antigen; AAA+ fold, viral protein; HET: ATP; 1.94A {Simian virus 40} SCOP: c.37.1.20 PDB: 1svl_A* 1svo_A 1n25_A 2h1l_A
Probab=97.88 E-value=1.5e-05 Score=93.15 Aligned_cols=66 Identities=20% Similarity=0.264 Sum_probs=44.8
Q ss_pred CCCCCceEEEeCCCCCCchHHHHHHHHHhCCCeEEEecCCcchhHHHhhccccccccCchhHHHHHHhhcCCCCEEEEec
Q psy8969 377 GTTQGKILCFYGPPGVGKTSIAKSIARALNREYFRFSVGGMSDVAEIKGHRRTYVGAMPGKVIQCMKKTKTENPLVLIDE 456 (1230)
Q Consensus 377 ~~~~~~~llL~GPPG~GKTslak~iA~~l~~~~~~~~~~~~~d~~~i~g~~~~~~g~~~g~i~~~~~~~~~~~pvillDE 456 (1230)
+..+|.+++|+||||+|||||+++||..++..++.+ ....+.. ..++|..+ ...++|+||
T Consensus 165 ~i~~~~~i~l~G~~GsGKSTl~~~l~~~~~g~~~~~--~~~~~~~------~~~lg~~~------------q~~~~l~dd 224 (377)
T 1svm_A 165 NIPKKRYWLFKGPIDSGKTTLAAALLELCGGKALNV--NLPLDRL------NFELGVAI------------DQFLVVFED 224 (377)
T ss_dssp CCTTCCEEEEECSTTSSHHHHHHHHHHHHCCEEECC--SSCTTTH------HHHHGGGT------------TCSCEEETT
T ss_pred ccCCCCEEEEECCCCCCHHHHHHHHHhhcCCcEEEE--eccchhH------HHHHHHhc------------chhHHHHHH
Confidence 566788999999999999999999999987765432 1111100 11233222 245789999
Q ss_pred ccccCC
Q psy8969 457 VDKIGK 462 (1230)
Q Consensus 457 IDk~~~ 462 (1230)
++.+..
T Consensus 225 ~~~~~~ 230 (377)
T 1svm_A 225 VKGTGG 230 (377)
T ss_dssp CCCSTT
T ss_pred HHHHHH
Confidence 998764
No 463
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}
Probab=97.11 E-value=1.7e-06 Score=61.57 Aligned_cols=28 Identities=54% Similarity=1.073 Sum_probs=14.9
Q ss_pred CCEeecccccCccccchhhHHHHhhhccCc
Q psy8969 1193 KPYRCAHEFCSKSFKTSGDLQKHVRTHTDE 1222 (1230)
Q Consensus 1193 KPy~C~~e~CGKsF~~ks~LkrH~R~HtGE 1222 (1230)
+||.|. .||+.|.+..+|.+|+++|+|+
T Consensus 2 k~~~C~--~C~k~f~~~~~l~~H~~~h~~~ 29 (30)
T 2lvr_A 2 KPYVCI--HCQRQFADPGALQRHVRIHTGE 29 (30)
Confidence 455552 4555555555555555555554
No 464
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=97.88 E-value=4.9e-06 Score=59.23 Aligned_cols=27 Identities=30% Similarity=0.695 Sum_probs=13.5
Q ss_pred cccCCcccccccccCchhhhhh-cccccCC
Q psy8969 1164 PYKCPVEYCEKAFSTQYSRKAH-IRTHTGE 1192 (1230)
Q Consensus 1164 PykCpve~CgKsF~~ks~Lk~H-~RtHTGE 1192 (1230)
||+|+ .|+++|.+++.|.+| +++|+|+
T Consensus 2 ~~~C~--~C~k~f~~~~~l~~H~~~~H~~~ 29 (30)
T 1paa_A 2 AYACG--LCNRAFTRRDLLIRHAQKIHSGN 29 (30)
T ss_dssp CSBCT--TTCCBCSSSHHHHHHHTTTSCCC
T ss_pred CcCCc--ccCcccCChHHHHHHHHHHccCC
Confidence 45552 355555555555555 4455544
No 465
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=97.88 E-value=4.1e-06 Score=58.13 Aligned_cols=26 Identities=35% Similarity=0.770 Sum_probs=12.7
Q ss_pred cccCCcccccccccCchhhhhhcccccC
Q psy8969 1164 PYKCPVEYCEKAFSTQYSRKAHIRTHTG 1191 (1230)
Q Consensus 1164 PykCpve~CgKsF~~ks~Lk~H~RtHTG 1191 (1230)
||+|+ .|+++|.+++.|.+|+++|+|
T Consensus 1 ~~~C~--~C~k~f~~~~~l~~H~~~h~~ 26 (27)
T 1znf_A 1 XYKCG--LCERSFVEKSALSRHQRVHKN 26 (27)
T ss_dssp -CBCS--SSCCBCSSHHHHHHHGGGTCC
T ss_pred CccCC--CCCCcCCCHHHHHHHHHHcCC
Confidence 34552 355555555555555555554
No 466
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=97.06 E-value=2.2e-06 Score=60.75 Aligned_cols=27 Identities=33% Similarity=0.632 Sum_probs=13.4
Q ss_pred CccCCCCCCCCCCchhhhccccccCCC
Q psy8969 1136 NNVCPECKKTFSSAHHMKVHLRIHSGI 1162 (1230)
Q Consensus 1136 py~C~~CgK~F~s~s~Lk~H~R~HTGE 1162 (1230)
||.|+.||+.|...++|..|+++|+|+
T Consensus 2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~ 28 (29)
T 2lvt_A 2 PCQCVMCGKAFTQASSLIAHVRQHTGE 28 (29)
Confidence 444555555555555555555555444
No 467
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=97.84 E-value=4.7e-06 Score=58.74 Aligned_cols=28 Identities=36% Similarity=0.928 Sum_probs=16.2
Q ss_pred CCEeecccccCccccchhhHHHHhhhccCc
Q psy8969 1193 KPYRCAHEFCSKSFKTSGDLQKHVRTHTDE 1222 (1230)
Q Consensus 1193 KPy~C~~e~CGKsF~~ks~LkrH~R~HtGE 1222 (1230)
+||.| +.||+.|.+..+|.+|+++|++|
T Consensus 1 k~~~C--~~C~~~f~~~~~l~~H~~~h~~~ 28 (29)
T 1ard_A 1 RSFVC--EVCTRAFARQEHLKRHYRSHTNE 28 (29)
T ss_dssp CCCBC--TTTCCBCSSHHHHHHHHHHHSCC
T ss_pred CCeEC--CCCCcccCCHHHHHHHHHHhcCC
Confidence 35556 24666666666666666666554
No 468
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=97.83 E-value=7.4e-06 Score=57.42 Aligned_cols=27 Identities=37% Similarity=0.909 Sum_probs=14.8
Q ss_pred CCEeecccccCccccchhhHHHHhhhccC
Q psy8969 1193 KPYRCAHEFCSKSFKTSGDLQKHVRTHTD 1221 (1230)
Q Consensus 1193 KPy~C~~e~CGKsF~~ks~LkrH~R~HtG 1221 (1230)
+||.|. .||+.|.++.+|.+|+++|+|
T Consensus 2 k~~~C~--~C~k~f~~~~~l~~H~~~h~~ 28 (28)
T 2kvf_A 2 RPYSCS--VCGKRFSLKHQMETHYRVHTG 28 (28)
T ss_dssp CSEECS--SSCCEESCHHHHHHHHTTSCC
T ss_pred cCccCC--CCCcccCCHHHHHHHHHhcCC
Confidence 455552 455555555555555555543
No 469
>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B
Probab=97.83 E-value=8.4e-06 Score=62.09 Aligned_cols=33 Identities=15% Similarity=0.316 Sum_probs=28.1
Q ss_pred cccCCCCEeecccccCccccchhhHHHHhhhccCc
Q psy8969 1188 THTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTDE 1222 (1230)
Q Consensus 1188 tHTGEKPy~C~~e~CGKsF~~ks~LkrH~R~HtGE 1222 (1230)
.++|||||.|+ .|||+|+++++|++|+..+-++
T Consensus 2 ~~~gekp~~C~--~CgK~F~~~s~L~~H~py~C~~ 34 (36)
T 1fv5_A 2 SLLKPARFMCL--PCGIAFSSPSTLEAHQAYYCSH 34 (36)
T ss_dssp CSSSCCCCEET--TTTEECSCHHHHHHHHHHTSTT
T ss_pred CCCCccCeECC--CCCCccCCHhHccCcCCeECcC
Confidence 36899999995 7999999999999999655444
No 470
>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=97.81 E-value=8e-06 Score=57.08 Aligned_cols=27 Identities=33% Similarity=0.834 Sum_probs=16.7
Q ss_pred CCCEeecccccCccccchhhHHHHhhhcc
Q psy8969 1192 EKPYRCAHEFCSKSFKTSGDLQKHVRTHT 1220 (1230)
Q Consensus 1192 EKPy~C~~e~CGKsF~~ks~LkrH~R~Ht 1220 (1230)
++||.|. .||+.|.++++|.+|+++|+
T Consensus 1 ~k~~~C~--~C~k~f~~~~~l~~H~~~H~ 27 (27)
T 2kvg_A 1 AAPYRCP--LCRAGCPSLASMQAHMRGHS 27 (27)
T ss_dssp CCTEEET--TTTEEESCHHHHHHHHTTCC
T ss_pred CcCcCCC--CCCcccCCHHHHHHHHHhcC
Confidence 3566663 56666666666666666664
No 471
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=97.80 E-value=5.7e-06 Score=58.59 Aligned_cols=29 Identities=31% Similarity=0.687 Sum_probs=15.7
Q ss_pred CcccCCcccccccccCchhhhhhcccccCCC
Q psy8969 1163 RPYKCPVEYCEKAFSTQYSRKAHIRTHTGEK 1193 (1230)
Q Consensus 1163 KPykCpve~CgKsF~~ks~Lk~H~RtHTGEK 1193 (1230)
+||+|+ .|++.|.+.+.|..|+++|++++
T Consensus 1 k~~~C~--~C~k~f~~~~~l~~H~~~h~~~~ 29 (30)
T 1klr_A 1 KTYQCQ--YCEFRSADSSNLKTHIKTKHSKE 29 (30)
T ss_dssp CCCCCS--SSSCCCSCSHHHHHHHHHHTSSC
T ss_pred CCccCC--CCCCccCCHHHHHHHHHHHccCC
Confidence 355553 35555555555555555555554
No 472
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=97.79 E-value=6e-06 Score=57.91 Aligned_cols=28 Identities=46% Similarity=0.944 Sum_probs=19.5
Q ss_pred CCcccCCcccccccccCchhhhhhcccccC
Q psy8969 1162 IRPYKCPVEYCEKAFSTQYSRKAHIRTHTG 1191 (1230)
Q Consensus 1162 EKPykCpve~CgKsF~~ks~Lk~H~RtHTG 1191 (1230)
|+||+|+ .|+++|.+++.|.+|+++|+|
T Consensus 1 ~k~~~C~--~C~k~f~~~~~l~~H~~~h~~ 28 (28)
T 2kvf_A 1 MRPYSCS--VCGKRFSLKHQMETHYRVHTG 28 (28)
T ss_dssp CCSEECS--SSCCEESCHHHHHHHHTTSCC
T ss_pred CcCccCC--CCCcccCCHHHHHHHHHhcCC
Confidence 4677774 477777777777777777764
No 473
>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=97.79 E-value=8.5e-06 Score=57.26 Aligned_cols=28 Identities=46% Similarity=0.992 Sum_probs=17.5
Q ss_pred CCEeecccccCccccchhhHHHHhhhccCc
Q psy8969 1193 KPYRCAHEFCSKSFKTSGDLQKHVRTHTDE 1222 (1230)
Q Consensus 1193 KPy~C~~e~CGKsF~~ks~LkrH~R~HtGE 1222 (1230)
+||.|. .||+.|.+..+|..|+++|+||
T Consensus 1 ~~~~C~--~C~k~f~~~~~l~~H~~~H~~~ 28 (29)
T 2m0f_A 1 GPLKCR--ECGKQFTTSGNLKRHLRIHSGE 28 (29)
T ss_dssp CCEECT--TTSCEESCHHHHHHHHHHHHTC
T ss_pred CCccCC--CCCCccCChhHHHHHHHHhcCC
Confidence 356663 4666666666666666666665
No 474
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=97.79 E-value=1e-05 Score=56.35 Aligned_cols=27 Identities=37% Similarity=0.866 Sum_probs=17.0
Q ss_pred CCCEeecccccCccccchhhHHHHhhhcc
Q psy8969 1192 EKPYRCAHEFCSKSFKTSGDLQKHVRTHT 1220 (1230)
Q Consensus 1192 EKPy~C~~e~CGKsF~~ks~LkrH~R~Ht 1220 (1230)
|+||.|. .||+.|.++.+|.+|+++|+
T Consensus 1 ek~~~C~--~C~k~f~~~~~l~~H~~~H~ 27 (27)
T 2kvh_A 1 EKPFSCS--LCPQRSRDFSAMTKHLRTHG 27 (27)
T ss_dssp CCCEECS--SSSCEESSHHHHHHHHHHCC
T ss_pred CcCccCC--CcChhhCCHHHHHHHHHHcc
Confidence 4566663 56666666666666666664
No 475
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=97.77 E-value=6e-06 Score=57.96 Aligned_cols=28 Identities=32% Similarity=0.816 Sum_probs=15.7
Q ss_pred CCEeecccccCccccchhhHHHHhhhccCc
Q psy8969 1193 KPYRCAHEFCSKSFKTSGDLQKHVRTHTDE 1222 (1230)
Q Consensus 1193 KPy~C~~e~CGKsF~~ks~LkrH~R~HtGE 1222 (1230)
+||.|. .||+.|.+..+|..|+++|+||
T Consensus 1 k~~~C~--~C~~~f~~~~~l~~H~~~h~~~ 28 (29)
T 2m0e_A 1 KEHKCP--HCDKKFNQVGNLKAHLKIHIAD 28 (29)
T ss_dssp CCCCCS--SCCCCCCTTTHHHHHHHHHHSC
T ss_pred CCCcCC--CCCcccCCHHHHHHHHHHhccC
Confidence 355553 4555555555555555555554
No 476
>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=97.77 E-value=5.2e-06 Score=58.39 Aligned_cols=29 Identities=48% Similarity=0.847 Sum_probs=18.8
Q ss_pred CcccCCcccccccccCchhhhhhcccccCCC
Q psy8969 1163 RPYKCPVEYCEKAFSTQYSRKAHIRTHTGEK 1193 (1230)
Q Consensus 1163 KPykCpve~CgKsF~~ks~Lk~H~RtHTGEK 1193 (1230)
+||+|+ .|+++|.+.+.|..|+++|+|++
T Consensus 1 ~~~~C~--~C~k~f~~~~~l~~H~~~H~~~k 29 (29)
T 2m0f_A 1 GPLKCR--ECGKQFTTSGNLKRHLRIHSGEK 29 (29)
T ss_dssp CCEECT--TTSCEESCHHHHHHHHHHHHTCC
T ss_pred CCccCC--CCCCccCChhHHHHHHHHhcCCC
Confidence 466663 46666666666666666666654
No 477
>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=97.74 E-value=6.7e-06 Score=57.47 Aligned_cols=27 Identities=37% Similarity=0.853 Sum_probs=20.4
Q ss_pred CCcccCCcccccccccCchhhhhhccccc
Q psy8969 1162 IRPYKCPVEYCEKAFSTQYSRKAHIRTHT 1190 (1230)
Q Consensus 1162 EKPykCpve~CgKsF~~ks~Lk~H~RtHT 1190 (1230)
++||+|+ .|+++|.+++.|.+|+++|+
T Consensus 1 ~k~~~C~--~C~k~f~~~~~l~~H~~~H~ 27 (27)
T 2kvg_A 1 AAPYRCP--LCRAGCPSLASMQAHMRGHS 27 (27)
T ss_dssp CCTEEET--TTTEEESCHHHHHHHHTTCC
T ss_pred CcCcCCC--CCCcccCCHHHHHHHHHhcC
Confidence 4678884 58888888888888887775
No 478
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=97.71 E-value=8.3e-06 Score=56.76 Aligned_cols=27 Identities=26% Similarity=0.607 Sum_probs=18.8
Q ss_pred CCcccCCcccccccccCchhhhhhccccc
Q psy8969 1162 IRPYKCPVEYCEKAFSTQYSRKAHIRTHT 1190 (1230)
Q Consensus 1162 EKPykCpve~CgKsF~~ks~Lk~H~RtHT 1190 (1230)
|+||+|+ .|+++|.+++.|.+|+++|+
T Consensus 1 ek~~~C~--~C~k~f~~~~~l~~H~~~H~ 27 (27)
T 2kvh_A 1 EKPFSCS--LCPQRSRDFSAMTKHLRTHG 27 (27)
T ss_dssp CCCEECS--SSSCEESSHHHHHHHHHHCC
T ss_pred CcCccCC--CcChhhCCHHHHHHHHHHcc
Confidence 4677774 47777777777777777764
No 479
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=97.70 E-value=1.2e-05 Score=55.72 Aligned_cols=27 Identities=33% Similarity=0.879 Sum_probs=23.7
Q ss_pred CEeecccccCccccchhhHHHHhhhccCc
Q psy8969 1194 PYRCAHEFCSKSFKTSGDLQKHVRTHTDE 1222 (1230)
Q Consensus 1194 Py~C~~e~CGKsF~~ks~LkrH~R~HtGE 1222 (1230)
||.| +.||+.|.++.+|.+|+++|+||
T Consensus 1 ~~~C--~~C~k~f~~~~~l~~H~~~h~~~ 27 (27)
T 1znf_A 1 XYKC--GLCERSFVEKSALSRHQRVHKNX 27 (27)
T ss_dssp -CBC--SSSCCBCSSHHHHHHHGGGTCC-
T ss_pred CccC--CCCCCcCCCHHHHHHHHHHcCCC
Confidence 6899 47999999999999999999986
No 480
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=97.70 E-value=1.4e-05 Score=56.82 Aligned_cols=27 Identities=30% Similarity=0.607 Sum_probs=15.4
Q ss_pred CccCCCCCCCCCCchhhhcc-ccccCCC
Q psy8969 1136 NNVCPECKKTFSSAHHMKVH-LRIHSGI 1162 (1230)
Q Consensus 1136 py~C~~CgK~F~s~s~Lk~H-~R~HTGE 1162 (1230)
||.|+.||+.|.+.++|.+| +++|+|+
T Consensus 2 ~~~C~~C~k~f~~~~~l~~H~~~~H~~~ 29 (30)
T 1paa_A 2 AYACGLCNRAFTRRDLLIRHAQKIHSGN 29 (30)
T ss_dssp CSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred CcCCcccCcccCChHHHHHHHHHHccCC
Confidence 45555555555555555555 4555554
No 481
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=96.86 E-value=5.7e-06 Score=57.08 Aligned_cols=25 Identities=40% Similarity=0.812 Sum_probs=13.3
Q ss_pred CcccCCcccccccccCchhhhhhcccc
Q psy8969 1163 RPYKCPVEYCEKAFSTQYSRKAHIRTH 1189 (1230)
Q Consensus 1163 KPykCpve~CgKsF~~ks~Lk~H~RtH 1189 (1230)
|||+|+ .|+++|.+++.|.+|+++|
T Consensus 1 kp~~C~--~C~k~f~~~~~l~~H~~~H 25 (26)
T 2lvu_A 1 KPYVCE--RCGKRFVQSSQLANHIRHH 25 (26)
Confidence 355553 3555555555555555555
No 482
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=97.60 E-value=0.00017 Score=77.77 Aligned_cols=132 Identities=20% Similarity=0.192 Sum_probs=74.4
Q ss_pred eEEEeCCCCCCchHHHHHHHHHh---CCCeEEEecCC---cchhHHHhhccc------ccccc--CchhHHHHHHhhcCC
Q psy8969 383 ILCFYGPPGVGKTSIAKSIARAL---NREYFRFSVGG---MSDVAEIKGHRR------TYVGA--MPGKVIQCMKKTKTE 448 (1230)
Q Consensus 383 ~llL~GPPG~GKTslak~iA~~l---~~~~~~~~~~~---~~d~~~i~g~~~------~~~g~--~~g~i~~~~~~~~~~ 448 (1230)
.|++.||||||||++|-.+|..+ |...+-+.+.. ....+.+.|... .|-|. ..+.+.+++. ..
T Consensus 8 ~I~~~~kgGvGKTt~a~~la~~l~~~G~~V~v~d~D~q~~~~~~al~~gl~~~~~~~~~~~~~~~~e~~l~~~L~---~~ 84 (228)
T 2r8r_A 8 KVFLGAAPGVGKTYAMLQAAHAQLRQGVRVMAGVVETHGRAETEALLNGLPQQPLLRTEYRGMTLEEMDLDALLK---AA 84 (228)
T ss_dssp EEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEECCCTTCHHHHHHHTTSCBCCCEEEEETTEEEEECCHHHHHH---HC
T ss_pred EEEEECCCCCcHHHHHHHHHHHHHHCCCCEEEEEeCCCCChhHHHHhcCccccCcceeecCCcccccccHHHHHh---cC
Confidence 48899999999999999998876 55544344321 111223333221 11111 1234444443 24
Q ss_pred CCEEEEecccccCCCCCCChhhHHHhhcChhhhhhhhhhccCccccCCceEEEEecC------------------CCCCC
Q psy8969 449 NPLVLIDEVDKIGKGYSGDPASALLEMLDPEQNANFLDHYLDVPVDLSRVLFICTAN------------------VIDTI 510 (1230)
Q Consensus 449 ~pvillDEIDk~~~~~~~~~~~all~~ld~~q~~~f~d~~~~~~~d~s~v~~I~TaN------------------~~~~I 510 (1230)
..+|+|||+-..... +.....+.+.+... .+ +.+=+|+|+| .-++|
T Consensus 85 pdlvIVDElG~~~~~--~~r~~~~~qDV~~~-------------l~-sgidVitT~Nlqh~esl~d~v~~itg~~v~e~v 148 (228)
T 2r8r_A 85 PSLVLVDELAHTNAP--GSRHTKRWQDIQEL-------------LA-AGIDVYTTVNVQHLESLNDQVRGITGVQVRETL 148 (228)
T ss_dssp CSEEEESCTTCBCCT--TCSSSBHHHHHHHH-------------HH-TTCEEEEEEEGGGBGGGHHHHHHHHSCCCCSCB
T ss_pred CCEEEEeCCCCCCcc--cchhHHHHHHHHHH-------------Hc-CCCCEEEEccccccccHHHHHHHHcCCCcCCcC
Confidence 679999998764322 11111111111100 00 2334566666 23789
Q ss_pred CHhhhcccceeecCCCCHHHHHH
Q psy8969 511 PEPLRDRMEMIDVSGYVAEEKVA 533 (1230)
Q Consensus 511 ~~~L~~R~~~i~~~~~~~~e~~~ 533 (1230)
|..++++.+-|++-..++++.+.
T Consensus 149 pd~~~~~a~~v~lvD~~p~~l~~ 171 (228)
T 2r8r_A 149 PDWVLQEAFDLVLIDLPPRELLE 171 (228)
T ss_dssp CHHHHHTCSEEEEBCCCHHHHHH
T ss_pred ccHHHhhCCeEEEecCCHHHHHH
Confidence 99999999888888889998543
No 483
>2orw_A Thymidine kinase; TMTK, TP4A, transferase; HET: 4TA; 1.50A {Thermotoga maritima} PDB: 2qpo_A 2qq0_A* 2qqe_A*
Probab=97.58 E-value=3.4e-05 Score=81.09 Aligned_cols=25 Identities=32% Similarity=0.376 Sum_probs=20.9
Q ss_pred CCceEEEeCCCCCCchHHHHHHHHH
Q psy8969 380 QGKILCFYGPPGVGKTSIAKSIARA 404 (1230)
Q Consensus 380 ~~~~llL~GPPG~GKTslak~iA~~ 404 (1230)
+|.+++++||||+||||++..+|..
T Consensus 2 ~g~i~vi~G~~gsGKTT~ll~~~~~ 26 (184)
T 2orw_A 2 SGKLTVITGPMYSGKTTELLSFVEI 26 (184)
T ss_dssp CCCEEEEEESTTSSHHHHHHHHHHH
T ss_pred ccEEEEEECCCCCCHHHHHHHHHHH
Confidence 4678999999999999999666554
No 484
>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A
Probab=97.57 E-value=3.5e-05 Score=54.10 Aligned_cols=29 Identities=34% Similarity=0.690 Sum_probs=17.6
Q ss_pred CCEeecccccCccccchhhHHHHhhhccC
Q psy8969 1193 KPYRCAHEFCSKSFKTSGDLQKHVRTHTD 1221 (1230)
Q Consensus 1193 KPy~C~~e~CGKsF~~ks~LkrH~R~HtG 1221 (1230)
+||.|..+.||+.|.++++|.+|+++|+|
T Consensus 1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~~ 29 (29)
T 2ab3_A 1 MVYVCHFENCGRSFNDRRKLNRHKKIHTG 29 (29)
T ss_dssp CCEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred CCCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence 35666311566666666666666666654
No 485
>2i3b_A HCR-ntpase, human cancer-related ntpase; AAA, rossmann, hydrolase; NMR {Homo sapiens} SCOP: c.37.1.11
Probab=97.57 E-value=7.5e-05 Score=78.81 Aligned_cols=25 Identities=36% Similarity=0.736 Sum_probs=22.9
Q ss_pred CceEEEeCCCCCCchHHHHHHHHHh
Q psy8969 381 GKILCFYGPPGVGKTSIAKSIARAL 405 (1230)
Q Consensus 381 ~~~llL~GPPG~GKTslak~iA~~l 405 (1230)
|..++|+||+|+|||||.+.||..+
T Consensus 1 G~~i~i~G~nG~GKTTll~~l~g~~ 25 (189)
T 2i3b_A 1 ARHVFLTGPPGVGKTTLIHKASEVL 25 (189)
T ss_dssp CCCEEEESCCSSCHHHHHHHHHHHH
T ss_pred CCEEEEECCCCChHHHHHHHHHhhc
Confidence 4578999999999999999999987
No 486
>2ehv_A Hypothetical protein PH0186; KAIC, RECA ATPase, unknown function; HET: ADP; 2.07A {Pyrococcus horikoshii} PDB: 2zts_A*
Probab=97.54 E-value=0.00019 Score=78.04 Aligned_cols=38 Identities=24% Similarity=0.349 Sum_probs=28.9
Q ss_pred CCCCCceEEEeCCCCCCchHHHHHHH--HH--hCCCeEEEec
Q psy8969 377 GTTQGKILCFYGPPGVGKTSIAKSIA--RA--LNREYFRFSV 414 (1230)
Q Consensus 377 ~~~~~~~llL~GPPG~GKTslak~iA--~~--l~~~~~~~~~ 414 (1230)
+..+|.+++|+||+|+|||||++.|+ .. -+...+.++.
T Consensus 26 gi~~G~~~~l~GpnGsGKSTLl~~i~~~~~~~~~~~~~~~~~ 67 (251)
T 2ehv_A 26 GFPEGTTVLLTGGTGTGKTTFAAQFIYKGAEEYGEPGVFVTL 67 (251)
T ss_dssp SEETTCEEEEECCTTSSHHHHHHHHHHHHHHHHCCCEEEEES
T ss_pred CCCCCcEEEEEeCCCCCHHHHHHHHHHHHHHhCCCeEEEEEc
Confidence 45678999999999999999999998 33 2444444443
No 487
>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}
Probab=97.54 E-value=5.6e-05 Score=65.34 Aligned_cols=56 Identities=20% Similarity=0.485 Sum_probs=43.6
Q ss_pred ccCCcccccccccCchhhhhhc-ccccCCC------CEeecccccCccccchhhHHHHhhhcc
Q psy8969 1165 YKCPVEYCEKAFSTQYSRKAHI-RTHTGEK------PYRCAHEFCSKSFKTSGDLQKHVRTHT 1220 (1230)
Q Consensus 1165 ykCpve~CgKsF~~ks~Lk~H~-RtHTGEK------Py~C~~e~CGKsF~~ks~LkrH~R~Ht 1220 (1230)
|.|....|++.|.+...|..|+ +.|.|.+ +|.|..+.|++.+.....|..|+|.+|
T Consensus 2 l~C~W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~H 64 (64)
T 1zw8_A 2 LKCKWKECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQH 64 (64)
T ss_dssp CCCCCTTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred CeEeeCCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccccC
Confidence 4566567888888888888887 4787665 788877778888888888888888754
No 488
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=96.65 E-value=1.4e-05 Score=55.12 Aligned_cols=24 Identities=46% Similarity=0.964 Sum_probs=12.4
Q ss_pred CEeecccccCccccchhhHHHHhhhc
Q psy8969 1194 PYRCAHEFCSKSFKTSGDLQKHVRTH 1219 (1230)
Q Consensus 1194 Py~C~~e~CGKsF~~ks~LkrH~R~H 1219 (1230)
||.|. .||+.|.++.+|.+|+++|
T Consensus 2 p~~C~--~C~k~f~~~~~l~~H~~~H 25 (26)
T 2lvu_A 2 PYVCE--RCGKRFVQSSQLANHIRHH 25 (26)
Confidence 45552 4555555555555555554
No 489
>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A
Probab=97.49 E-value=2.8e-05 Score=54.62 Aligned_cols=29 Identities=31% Similarity=0.651 Sum_probs=19.2
Q ss_pred CcccCCcccccccccCchhhhhhcccccC
Q psy8969 1163 RPYKCPVEYCEKAFSTQYSRKAHIRTHTG 1191 (1230)
Q Consensus 1163 KPykCpve~CgKsF~~ks~Lk~H~RtHTG 1191 (1230)
+||.|+...|+++|.+++.|.+|+++|+|
T Consensus 1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~~ 29 (29)
T 2ab3_A 1 MVYVCHFENCGRSFNDRRKLNRHKKIHTG 29 (29)
T ss_dssp CCEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred CCCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence 46777411577777777777777777764
No 490
>2px0_A Flagellar biosynthesis protein FLHF; SRP GTPase, flagellum, protein transport, biosynthetic protein; HET: GNP; 3.00A {Bacillus subtilis} PDB: 2px3_A* 3syn_A*
Probab=97.41 E-value=0.00093 Score=75.46 Aligned_cols=137 Identities=12% Similarity=0.145 Sum_probs=73.0
Q ss_pred HHHHHHHHHHhcCCCChhHHHHHHHHHH--HhccCCCCCCccchhhhHHHHhhcCCCCCcccccccHHHHhhhhcccccC
Q psy8969 281 AIEEKFRERIKDKKVPPPVMEVLNEELA--KLGFLESHSSEFNVTRNYLDWLTSLPWGIQSEENLDLTQAAKILDDDHYG 358 (1230)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~--~l~~~~~~~~e~~v~~~yl~~~~~lpw~~~~~~~~~~~~~~~~l~~d~~G 358 (1230)
+.++++++.|.++.+..++.+.+.++++ ++... ..++ ..++.++
T Consensus 40 ~~~~~l~~~L~~~dv~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~------------------------------- 85 (296)
T 2px0_A 40 EPLRKAEKLLQETGIKESTKTNTLKKLLRFSVEAG-GLTE--ENVVGKL------------------------------- 85 (296)
T ss_dssp CHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHSSS-CCCT--TTHHHHH-------------------------------
T ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHhhccc-CCCH--HHHHHHH-------------------------------
Confidence 4567889999999999999999988883 22221 0011 1111111
Q ss_pred hHHHHHHHHHHHHHh-hhcCCCCCceEEEeCCCCCCchHHHHHHHHHh----CCCeEEEecCCcc--hhHHHhhccc---
Q psy8969 359 MEDVKKRILEFIAVS-QLKGTTQGKILCFYGPPGVGKTSIAKSIARAL----NREYFRFSVGGMS--DVAEIKGHRR--- 428 (1230)
Q Consensus 359 ~~~vK~~i~e~l~~~-~~~~~~~~~~llL~GPPG~GKTslak~iA~~l----~~~~~~~~~~~~~--d~~~i~g~~~--- 428 (1230)
++.|.+.+... .+.-..+|.+++|+||+|+||||++..||..+ |....-++..-.+ ....+.....
T Consensus 86 ----~~~l~~~l~~~~~~~~~~~g~vi~lvG~~GsGKTTl~~~LA~~l~~~~G~~V~lv~~D~~r~~a~eqL~~~~~~~g 161 (296)
T 2px0_A 86 ----QEILCDMLPSADKWQEPIHSKYIVLFGSTGAGKTTTLAKLAAISMLEKHKKIAFITTDTYRIAAVEQLKTYAELLQ 161 (296)
T ss_dssp ----HHHHHTTSCCGGGSCCCCCSSEEEEEESTTSSHHHHHHHHHHHHHHTTCCCEEEEECCCSSTTHHHHHHHHHTTTT
T ss_pred ----HHHHHHHhCCcccccccCCCcEEEEECCCCCCHHHHHHHHHHHHHHhcCCEEEEEecCcccchHHHHHHHHHHhcC
Confidence 11111111000 01112357899999999999999999999876 3343333322111 1111111100
Q ss_pred --cccccCchhHHHHHHhhcCCCCEEEEec
Q psy8969 429 --TYVGAMPGKVIQCMKKTKTENPLVLIDE 456 (1230)
Q Consensus 429 --~~~g~~~g~i~~~~~~~~~~~pvillDE 456 (1230)
.+....+..+..++..+ ....+||||.
T Consensus 162 l~~~~~~~~~~l~~al~~~-~~~dlvIiDT 190 (296)
T 2px0_A 162 APLEVCYTKEEFQQAKELF-SEYDHVFVDT 190 (296)
T ss_dssp CCCCBCSSHHHHHHHHHHG-GGSSEEEEEC
T ss_pred CCeEecCCHHHHHHHHHHh-cCCCEEEEeC
Confidence 01122345566666655 4567999993
No 491
>1qhx_A CPT, protein (chloramphenicol phosphotransferase); kinase, antibiotic resistance, phosphorylation, mononucleoti binding fold; HET: ATP; 2.50A {Streptomyces venezuelae} SCOP: c.37.1.3 PDB: 1grr_A* 1grq_A 1qhs_A* 1qhn_A* 1qhy_A*
Probab=97.39 E-value=0.00011 Score=75.77 Aligned_cols=34 Identities=21% Similarity=0.517 Sum_probs=31.1
Q ss_pred CceEEEeCCCCCCchHHHHHHHHHhCCCeEEEec
Q psy8969 381 GKILCFYGPPGVGKTSIAKSIARALNREYFRFSV 414 (1230)
Q Consensus 381 ~~~llL~GPPG~GKTslak~iA~~l~~~~~~~~~ 414 (1230)
+.+|+|.||||+||||+|+.||+.++.+|+.++.
T Consensus 3 ~~~i~l~G~~GsGKST~a~~La~~l~~~~~~~~~ 36 (178)
T 1qhx_A 3 TRMIILNGGSSAGKSGIVRCLQSVLPEPWLAFGV 36 (178)
T ss_dssp CCEEEEECCTTSSHHHHHHHHHHHSSSCEEEEEH
T ss_pred ceEEEEECCCCCCHHHHHHHHHHhcCCCeEEecc
Confidence 5689999999999999999999999999987764
No 492
>3gfo_A Cobalt import ATP-binding protein CBIO 1; structural genomics, cell membrane, cobalt transport, hydrolase, ION transport; 2.30A {Clostridium perfringens atcc 13124}
Probab=97.35 E-value=0.00022 Score=79.72 Aligned_cols=28 Identities=25% Similarity=0.551 Sum_probs=25.2
Q ss_pred CCCceEEEeCCCCCCchHHHHHHHHHhC
Q psy8969 379 TQGKILCFYGPPGVGKTSIAKSIARALN 406 (1230)
Q Consensus 379 ~~~~~llL~GPPG~GKTslak~iA~~l~ 406 (1230)
.+|.++.|+||.|+|||||.++|+..+.
T Consensus 32 ~~Ge~~~iiGpnGsGKSTLl~~l~Gl~~ 59 (275)
T 3gfo_A 32 KRGEVTAILGGNGVGKSTLFQNFNGILK 59 (275)
T ss_dssp ETTSEEEEECCTTSSHHHHHHHHTTSSC
T ss_pred cCCCEEEEECCCCCCHHHHHHHHHcCCC
Confidence 5688999999999999999999998753
No 493
>1vma_A Cell division protein FTSY; TM0570, structural genomics, JCS protein structure initiative, PSI, joint center for structu genomics; HET: CIT; 1.60A {Thermotoga maritima} SCOP: a.24.13.1 c.37.1.10
Probab=97.35 E-value=0.0024 Score=72.45 Aligned_cols=81 Identities=22% Similarity=0.331 Sum_probs=54.2
Q ss_pred HHHHHHHHHHhcCCCChhHHHHHHHHHHHhccCCCCCCccchhhhHHHHhhcCCCCCcccccccHHHHhhhhcccccChH
Q psy8969 281 AIEEKFRERIKDKKVPPPVMEVLNEELAKLGFLESHSSEFNVTRNYLDWLTSLPWGIQSEENLDLTQAAKILDDDHYGME 360 (1230)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~e~~v~~~yl~~~~~lpw~~~~~~~~~~~~~~~~l~~d~~G~~ 360 (1230)
+.++++++.|-++.++.++.+.+.++++. .+++ ++ +
T Consensus 46 ~~~~~l~~~L~~~dv~~~~~~~~~~~~~~------~~~~---~~-----------------------------------~ 81 (306)
T 1vma_A 46 ETREELEELLIQADVGVETTEYILERLEE------KDGD---AL-----------------------------------E 81 (306)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHTT------CCSC---HH-----------------------------------H
T ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHh------cCHH---HH-----------------------------------H
Confidence 56788999999999999999888887754 1111 11 1
Q ss_pred HHHHHHHHHHHHhh-hc-CCCCCceEEEeCCCCCCchHHHHHHHHHh
Q psy8969 361 DVKKRILEFIAVSQ-LK-GTTQGKILCFYGPPGVGKTSIAKSIARAL 405 (1230)
Q Consensus 361 ~vK~~i~e~l~~~~-~~-~~~~~~~llL~GPPG~GKTslak~iA~~l 405 (1230)
-+++.|.+.+.... +. ...+|.+++|+||+|+||||++..||..+
T Consensus 82 ~~~~~l~~~l~~~~~~~~~~~~~~vi~ivG~~GsGKTTl~~~LA~~l 128 (306)
T 1vma_A 82 SLKEIILEILNFDTKLNVPPEPPFVIMVVGVNGTGKTTSCGKLAKMF 128 (306)
T ss_dssp HHHHHHHHHTCSCCCCCCCSSSCEEEEEECCTTSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCcccCCCCeEEEEEcCCCChHHHHHHHHHHHH
Confidence 12222222221110 11 13467899999999999999999999876
No 494
>3fvq_A Fe(3+) IONS import ATP-binding protein FBPC; nucleotide binding domain, ABC motor domain, ferric iron TRA ATP-binding, cell inner membrane; HET: ATP; 1.90A {Neisseria gonorrhoeae}
Probab=97.33 E-value=0.00017 Score=83.40 Aligned_cols=29 Identities=31% Similarity=0.526 Sum_probs=25.7
Q ss_pred CCCCceEEEeCCCCCCchHHHHHHHHHhC
Q psy8969 378 TTQGKILCFYGPPGVGKTSIAKSIARALN 406 (1230)
Q Consensus 378 ~~~~~~llL~GPPG~GKTslak~iA~~l~ 406 (1230)
..+|.++.|+||.|+|||||.++||..+.
T Consensus 27 i~~Ge~~~llGpsGsGKSTLLr~iaGl~~ 55 (359)
T 3fvq_A 27 LDPGEILFIIGASGCGKTTLLRCLAGFEQ 55 (359)
T ss_dssp ECTTCEEEEEESTTSSHHHHHHHHHTSSC
T ss_pred EcCCCEEEEECCCCchHHHHHHHHhcCCC
Confidence 35788999999999999999999998753
No 495
>2cvh_A DNA repair and recombination protein RADB; filament formation, homologous recombination, ATPase domain, hyperthermophIle; HET: DNA; 2.20A {Thermococcus kodakarensis} PDB: 2cvf_A*
Probab=97.31 E-value=0.00038 Score=74.04 Aligned_cols=40 Identities=25% Similarity=0.370 Sum_probs=34.1
Q ss_pred CCCCCceEEEeCCCCCCchHHHHHHHHHhCCCeEEEecCC
Q psy8969 377 GTTQGKILCFYGPPGVGKTSIAKSIARALNREYFRFSVGG 416 (1230)
Q Consensus 377 ~~~~~~~llL~GPPG~GKTslak~iA~~l~~~~~~~~~~~ 416 (1230)
+..+|.+++|+||||+|||+|++.||...+.+.+.++...
T Consensus 16 gi~~G~~~~i~G~~GsGKTtl~~~l~~~~~~~v~~i~~~~ 55 (220)
T 2cvh_A 16 GFAPGVLTQVYGPYASGKTTLALQTGLLSGKKVAYVDTEG 55 (220)
T ss_dssp SBCTTSEEEEECSTTSSHHHHHHHHHHHHCSEEEEEESSC
T ss_pred CCcCCEEEEEECCCCCCHHHHHHHHHHHcCCcEEEEECCC
Confidence 5678899999999999999999999986677777777654
No 496
>2a5y_B CED-4; apoptosis; HET: ATP; 2.60A {Caenorhabditis elegans} SCOP: a.4.5.80 a.77.1.3 c.37.1.20 PDB: 3lqq_A* 3lqr_A*
Probab=97.30 E-value=0.019 Score=70.20 Aligned_cols=152 Identities=15% Similarity=0.189 Sum_probs=84.3
Q ss_pred cChHHHHHHHHHHHHHhhhcCCCCCceEEEeCCCCCCchHHHHHHHH----HhCCCe---EEEecCCcc--hhHHHhhcc
Q psy8969 357 YGMEDVKKRILEFIAVSQLKGTTQGKILCFYGPPGVGKTSIAKSIAR----ALNREY---FRFSVGGMS--DVAEIKGHR 427 (1230)
Q Consensus 357 ~G~~~vK~~i~e~l~~~~~~~~~~~~~llL~GPPG~GKTslak~iA~----~l~~~~---~~~~~~~~~--d~~~i~g~~ 427 (1230)
+|-++.++.|.++|... .....+++.++|++|+|||+||+.+++ .....| +-+++++.. +...+...-
T Consensus 131 ~GR~~~~~~l~~~L~~~---~~~~~~vv~I~G~gGvGKTtLA~~v~~~~~~~~~~~F~~~~wv~vs~~~~~~~~~~~~~i 207 (549)
T 2a5y_B 131 YIREYHVDRVIKKLDEM---CDLDSFFLFLHGRAGSGKSVIASQALSKSDQLIGINYDSIVWLKDSGTAPKSTFDLFTDI 207 (549)
T ss_dssp CCCHHHHHHHHHHHHHH---TTSSSEEEEEECSTTSSHHHHHHHHHHHCSSTBTTTBSEEEEEECCCCSTTHHHHHHHHH
T ss_pred CCchHHHHHHHHHHhcc---cCCCceEEEEEcCCCCCHHHHHHHHHHhhhHHHhccCCcEEEEEECCCCCCCHHHHHHHH
Confidence 69999999999998432 123457899999999999999999996 344444 234555532 222211000
Q ss_pred cccccc---------C----chhHHHHHHhhcCC--CCEEEEecccccCCCCCCChhhHHHhhcChhhhhhhhhhccCcc
Q psy8969 428 RTYVGA---------M----PGKVIQCMKKTKTE--NPLVLIDEVDKIGKGYSGDPASALLEMLDPEQNANFLDHYLDVP 492 (1230)
Q Consensus 428 ~~~~g~---------~----~g~i~~~~~~~~~~--~pvillDEIDk~~~~~~~~~~~all~~ld~~q~~~f~d~~~~~~ 492 (1230)
-..+|. . ...+...+...-.. .-+|+||.++.. ..+ . +..
T Consensus 208 l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~~kr~LlVLDdv~~~---------~~~----------~-~~~----- 262 (549)
T 2a5y_B 208 LLMLKSEDDLLNFPSVEHVTSVVLKRMICNALIDRPNTLFVFDDVVQE---------ETI----------R-WAQ----- 262 (549)
T ss_dssp HHHHTTTSCCTTCCCCTTCCHHHHHHHHHHHHTTSTTEEEEEEEECCH---------HHH----------H-HHH-----
T ss_pred HHHHhcCcccccccccccccHHHHHHHHHHHHcCCCcEEEEEECCCCc---------hhh----------c-ccc-----
Confidence 000111 1 11233444433233 447779998752 110 0 110
Q ss_pred ccCCceEEEEecCCCCCCCHhhhcccceeecCCCCHHHHHHHHHHhh
Q psy8969 493 VDLSRVLFICTANVIDTIPEPLRDRMEMIDVSGYVAEEKVAIAAQYL 539 (1230)
Q Consensus 493 ~d~s~v~~I~TaN~~~~I~~~L~~R~~~i~~~~~~~~e~~~i~~~~l 539 (1230)
.....+|.||...... .....-..++.+.+++.+|-..++.++.
T Consensus 263 --~~gs~ilvTTR~~~v~-~~~~~~~~~~~l~~L~~~ea~~Lf~~~a 306 (549)
T 2a5y_B 263 --ELRLRCLVTTRDVEIS-NAASQTCEFIEVTSLEIDECYDFLEAYG 306 (549)
T ss_dssp --HTTCEEEEEESBGGGG-GGCCSCEEEEECCCCCHHHHHHHHHHTS
T ss_pred --cCCCEEEEEcCCHHHH-HHcCCCCeEEECCCCCHHHHHHHHHHHh
Confidence 0345566677643211 1111111468999999999888877653
No 497
>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}
Probab=97.30 E-value=0.00026 Score=61.14 Aligned_cols=55 Identities=20% Similarity=0.384 Sum_probs=41.5
Q ss_pred CCCCCCCCCCCccChhHHHhhh-hcccCCC------ceecCCCccCccccChhhHHHHHhhc
Q psy8969 792 FPCPVLGCDRSFTTSNIRKVHI-RTHTGEK------PYVCGEAGCDKSFASATNYKNHMRIH 846 (1230)
Q Consensus 792 ~~C~~~~C~k~F~~~~~L~~H~-r~H~gek------py~C~~~~Cgk~F~~~s~L~~H~r~H 846 (1230)
|.|....|++.|.+...|..|+ +.|.+.+ +|.|...+|++.+.....|..|+++.
T Consensus 2 l~C~W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~ 63 (64)
T 1zw8_A 2 LKCKWKECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQ 63 (64)
T ss_dssp CCCCCTTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred CeEeeCCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence 5677777888888888888887 4676655 68887667888777777788887764
No 498
>2w0m_A SSO2452; RECA, SSPF, unknown FUN; 2.0A {Sulfolobus solfataricus P2}
Probab=97.23 E-value=0.00056 Score=73.14 Aligned_cols=38 Identities=24% Similarity=0.368 Sum_probs=30.1
Q ss_pred CCCCCceEEEeCCCCCCchHHHHHHHHHh---CCCeEEEec
Q psy8969 377 GTTQGKILCFYGPPGVGKTSIAKSIARAL---NREYFRFSV 414 (1230)
Q Consensus 377 ~~~~~~~llL~GPPG~GKTslak~iA~~l---~~~~~~~~~ 414 (1230)
+..+|.+++|+||||+|||+|++.||..+ +.+.+.++.
T Consensus 19 gi~~G~~~~i~G~~GsGKTtl~~~l~~~~~~~~~~v~~~~~ 59 (235)
T 2w0m_A 19 GIPQGFFIALTGEPGTGKTIFSLHFIAKGLRDGDPCIYVTT 59 (235)
T ss_dssp SEETTCEEEEECSTTSSHHHHHHHHHHHHHHHTCCEEEEES
T ss_pred CCcCCCEEEEEcCCCCCHHHHHHHHHHHHHHCCCeEEEEEc
Confidence 45678899999999999999999999654 455555554
No 499
>3vaa_A Shikimate kinase, SK; structural genomics, center for structural genomics of infec diseases, csgid, metal binding, transferase; 1.70A {Bacteroides thetaiotaomicron}
Probab=97.20 E-value=0.00019 Score=75.79 Aligned_cols=34 Identities=29% Similarity=0.440 Sum_probs=29.9
Q ss_pred CCCceEEEeCCCCCCchHHHHHHHHHhCCCeEEE
Q psy8969 379 TQGKILCFYGPPGVGKTSIAKSIARALNREYFRF 412 (1230)
Q Consensus 379 ~~~~~llL~GPPG~GKTslak~iA~~l~~~~~~~ 412 (1230)
.++..|+|.||||+||||+|+.||+.+|.+|+..
T Consensus 23 ~~~~~i~l~G~~GsGKsTl~~~La~~l~~~~i~~ 56 (199)
T 3vaa_A 23 NAMVRIFLTGYMGAGKTTLGKAFARKLNVPFIDL 56 (199)
T ss_dssp -CCCEEEEECCTTSCHHHHHHHHHHHHTCCEEEH
T ss_pred CCCCEEEEEcCCCCCHHHHHHHHHHHcCCCEEcc
Confidence 3567899999999999999999999999998654
No 500
>3trf_A Shikimate kinase, SK; amino acid biosynthesis, transferase; 2.60A {Coxiella burnetii}
Probab=97.19 E-value=0.00019 Score=74.48 Aligned_cols=32 Identities=25% Similarity=0.352 Sum_probs=29.2
Q ss_pred CceEEEeCCCCCCchHHHHHHHHHhCCCeEEE
Q psy8969 381 GKILCFYGPPGVGKTSIAKSIARALNREYFRF 412 (1230)
Q Consensus 381 ~~~llL~GPPG~GKTslak~iA~~l~~~~~~~ 412 (1230)
++.|+|.||||+||||+|+.||+.+|.+|+..
T Consensus 5 ~~~i~l~G~~GsGKst~a~~La~~l~~~~i~~ 36 (185)
T 3trf_A 5 LTNIYLIGLMGAGKTSVGSQLAKLTKRILYDS 36 (185)
T ss_dssp CCEEEEECSTTSSHHHHHHHHHHHHCCCEEEH
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHhCCCEEEC
Confidence 56789999999999999999999999998754
Done!