RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy8969
(1230 letters)
>d1svma_ c.37.1.20 (A:) Papillomavirus large T antigen helicase
domain {Simian virus 40 [TaxId: 10633]}
Length = 362
Score = 164 bits (416), Expect = 6e-45
Identities = 50/407 (12%), Positives = 116/407 (28%), Gaps = 60/407 (14%)
Query: 215 LEEMDIPKRLMLSLSLLKKELELNKLQQKIGREVEEKVKQQHRKYILQEQLKA-----IK 269
+ E + + L LL LE + + +K + H KY + A K
Sbjct: 8 VTEYAMETKCDDVLLLLGMYLEFQYSFEMC-LKCIKKEQPSHYKYHEKHYANAAIFADSK 66
Query: 270 KELGLEKDDKDAIEEKFRERIKDKKVPPPVMEVLNEELAKLGFLESHSSEFNVTRNYLDW 329
+ + + D + K R + E +T + D
Sbjct: 67 NQKTICQQAVDTVLAKKRVDSLQL-----------------------TREQMLTNRFNDL 103
Query: 330 LTSLPWGIQSEENLDLTQAAKILDDDHYGMEDVKKRILEFIAVSQLKGTTQGKILCFYGP 389
L + S + D+ + + H + + + +F+ + + + F GP
Sbjct: 104 LDRMDIMFGSTGSADIEEWMAGVAWLHCLLPKMDSVVYDFLKC-MVYNIPKKRYWLFKGP 162
Query: 390 PGVGKTSIAKSIARALNREYFRFSVGGMSDVAEIKGHRRTYVGAMPGKVIQCMKKTKTEN 449
GKT++A ++ + ++ E+ ++ + V +++
Sbjct: 163 IDSGKTTLAAALLELCGGKALNVNLPLDRLNFELGVAIDQFLV-VFEDVKGTGGESRDLP 221
Query: 450 PLVLIDEVDKIGKGYSGDPASALLEMLDPEQNANFLDHYLDVPVDLSRVLFICTANVIDT 509
I+ +D + G L + ++ F I T N
Sbjct: 222 SGQGINNLDNLRDYLDGSVKVNLEKKHLNKRTQIFPP-------------GIVTMNEYSV 268
Query: 510 -IPEPLRDRMEMIDVSGYVAEEKVAIAAQYLIPQAMKESGLSPEQITLEPSAIQVLIKNY 568
R ++ + + + L I + + +LI
Sbjct: 269 PKTLQARFVKQIDFRPKDYLKHCLERSEFL----------LEKRIIQSGIALLLMLIWYR 318
Query: 569 CRESGVRNLQKHIEKVTRKVALTIVKKESDKVTVTNDNLSDFVGKPI 615
+++Q I + ++ K+ N++ G +
Sbjct: 319 PVAEFAQSIQSRIVEWKERLDKEFSLSVYQKM---KFNVAM--GIGV 360
>d1ofha_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Length = 309
Score = 142 bits (358), Expect = 7e-38
Identities = 54/297 (18%), Positives = 103/297 (34%), Gaps = 30/297 (10%)
Query: 350 KILDDDHYGMEDVKKRILEFI--------AVSQLKGTTQGKILCFYGPPGVGKTSIAKSI 401
LD G D K+ + + L+ K + GP GVGKT IA+ +
Sbjct: 10 SELDQHIIGQADAKRAVAIALRNRWRRMQLQEPLRHEVTPKNILMIGPTGVGKTEIARRL 69
Query: 402 ARALNREYFRFSVGGMSDVAEIKGHRRTYVGAMPGKVIQCMKKTKTENPLVLIDEVDKIG 461
A+ N + + ++V + + + +N +V IDE+DKI
Sbjct: 70 AKLANAPFIKVEATKFTEVGYVGKEVDSIIR-DLTDSAGGAIDAVEQNGIVFIDEIDKIC 128
Query: 462 KGYSGDPASALLE-----MLDPEQNANFLDHYLDVPVDLSRVLFICT--------ANVID 508
K A E +L + + + V +LFI + +++I
Sbjct: 129 KKGEYSGADVSREGVQRDLLPLVEGSTVSTKHGMV--KTDHILFIASGAFQVARPSDLIP 186
Query: 509 TIPEPLRDRMEMIDVSGYVAEEKVAIAAQYLIPQAMKESGLSPEQITLEPSAIQVL---- 564
+ L R+E+ +S E + L Q I A++ +
Sbjct: 187 ELQGRLPIRVELTALSAADFERILTEPHASLTEQYKALMATEGVNIAFTTDAVKKIAEAA 246
Query: 565 --IKNYCRESGVRNLQKHIEKVTRKVALTIVKKESDKVTVTNDNLSDFVGKPIFSHD 619
+ G R L +E++ K++ + V + ++D +G+ + + D
Sbjct: 247 FRVNEKTENIGARRLHTVMERLMDKISFSASDMNGQTVNIDAAYVADALGEVVENED 303
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta,
toxin zeta subunit {Streptococcus pyogenes [TaxId:
1314]}
Length = 273
Score = 117 bits (293), Expect = 1e-29
Identities = 30/266 (11%), Positives = 72/266 (27%), Gaps = 21/266 (7%)
Query: 349 AKILDDDHYGMEDVKKRILEFIAVSQLKGTTQGKILCFYGPPGVGKTSIAKSIARALNRE 408
A I++ E+ LE + + K G PG GKTS+ +I
Sbjct: 1 ANIVNFTDKQFENRLNDNLEEL-IQGKKAVESPTAFLLGGQPGSGKTSLRSAIFEETQGN 59
Query: 409 YFRFSVGGMSDVAEIKGHRRTYVGAMPGKVIQCMKKTKTENPLVLIDEVDKIGKGYSGDP 468
+ + V V++ + +I + G +
Sbjct: 60 VIVID---NDTFKQQHPNFDELVKLYEKDVVKHVTPYSNRMTEAIISRLSDQGYNLVIEG 116
Query: 469 A---SALLEMLDPEQNANFLDHYLDVPVDLSRVLFICTANVIDTIPEPLR--DRMEMIDV 523
+ + A + + V ++ T +T+ R
Sbjct: 117 TGRTTDVPIQTATMLQAKGYETKMYVMAVPKINSYLGTIERYETMYADDPMTARATPKQA 176
Query: 524 SGY-----------VAEEKVAIAAQYLIPQAMKE-SGLSPEQITLEPSAIQVLIKNYCRE 571
+ + + + + +K S L I+ + + + L + +
Sbjct: 177 HDIVVKNLPTNLETLHKTGLFSDIRLYNREGVKLYSSLETPSISPKETLEKELNRKVSGK 236
Query: 572 SGVRNLQKHIEKVTRKVALTIVKKES 597
L++ +K+ + ++
Sbjct: 237 EIQPTLERIEQKMVLNKHQETPEFKA 262
>d1lv7a_ c.37.1.20 (A:) AAA domain of cell division protein FtsH
{Escherichia coli [TaxId: 562]}
Length = 256
Score = 113 bits (284), Expect = 2e-28
Identities = 51/250 (20%), Positives = 86/250 (34%), Gaps = 26/250 (10%)
Query: 350 KILDDDHYGMEDVKKRILEFIAVSQLK--------GTTQGKILCFYGPPGVGKTSIAKSI 401
K D G ++ K+ + E V L+ G K + GPPG GKT +AK+I
Sbjct: 8 KTTFADVAGCDEAKEEVAE--LVEYLREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAI 65
Query: 402 ARALNREYFRFSVGGMSDVAEIKGHRRTYVGAMPGKVIQCMKKTKTENPLVL-IDEVDKI 460
A +F S SD E +VG +V ++ K P ++ IDE+D +
Sbjct: 66 AGEAKVPFFTIS---GSDFVE------MFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAV 116
Query: 461 GKGYSGDPASALLEMLDPEQNANFLDHYLDVPVDLSRVLFICTANVIDTIPEPLR--DRM 518
G+ E EQ N + +D ++ I N D + L R
Sbjct: 117 GRQRGAGLGGGHDER---EQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRF 173
Query: 519 -EMIDVSGYVAEEKVAIAAQYLIPQAMKESGLSPEQITLEPSAIQVLIKNYCRESGVRNL 577
+ V + I ++ + + P + N E+ +
Sbjct: 174 DRQVVVGLPDVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAALFAA 233
Query: 578 QKHIEKVTRK 587
+ + V+
Sbjct: 234 RGNKRVVSMV 243
>d1qzma_ c.37.1.20 (A:) ATPase domain of protease Lon (La)
{Escherichia coli [TaxId: 562]}
Length = 94
Score = 98.0 bits (244), Expect = 5e-25
Identities = 34/94 (36%), Positives = 60/94 (63%), Gaps = 1/94 (1%)
Query: 524 SGYVAEEKVAIAAQYLIPQAMKESGLSPEQITLEPSAIQVLIKNYCRESGVRNLQKHIEK 583
SGY +EK+ IA ++L+P+ ++ + L ++T++ SAI +I+ Y RE+GVR L++ I K
Sbjct: 1 SGYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREAGVRGLEREISK 60
Query: 584 VTRKVALTIVKKESDK-VTVTNDNLSDFVGKPIF 616
+ RK ++ +S K + + DNL D++G F
Sbjct: 61 LCRKAVKQLLLDKSLKHIEINGDNLHDYLGVQRF 94
>d1ixza_ c.37.1.20 (A:) AAA domain of cell division protein FtsH
{Thermus thermophilus [TaxId: 274]}
Length = 247
Score = 101 bits (252), Expect = 3e-24
Identities = 53/246 (21%), Positives = 91/246 (36%), Gaps = 26/246 (10%)
Query: 354 DDHYGMEDVKKRILEFIAVSQLK--------GTTQGKILCFYGPPGVGKTSIAKSIARAL 405
D G E+ K+ + E V LK G K + GPPGVGKT +A+++A
Sbjct: 9 KDVAGAEEAKEELKE--IVEFLKNPSRFHEMGARIPKGVLLVGPPGVGKTHLARAVAGEA 66
Query: 406 NREYFRFSVGGMSDVAEIKGHRRTYVGAMPGKVIQCMKKTKTENPLVL-IDEVDKIGKGY 464
+ S SD E +VG +V + K P ++ IDE+D +G+
Sbjct: 67 RVPFITAS---GSDFVE------MFVGVGAARVRDLFETAKRHAPCIVFIDEIDAVGRKR 117
Query: 465 SGDPASALLEMLDPEQNANFLDHYLDVPVDLSRVLFICTANVIDTIPEPLR--DRME-MI 521
E EQ N L +D + ++ + N D + L R + I
Sbjct: 118 GSGVGGGNDER---EQTLNQLLVEMDGFEKDTAIVVMAATNRPDILDPALLRPGRFDRQI 174
Query: 522 DVSGYVAEEKVAIAAQYLIPQAMKESGLSPEQITLEPSAIQVLIKNYCRESGVRNLQKHI 581
+ + + I + + + E P + ++N E+ + ++
Sbjct: 175 AIDAPDVKGREQILRIHARGKPLAEDVDLALLAKRTPGFVGADLENLLNEAALLAAREGR 234
Query: 582 EKVTRK 587
K+T K
Sbjct: 235 RKITMK 240
>d1r6bx3 c.37.1.20 (X:437-751) ClpA, an Hsp100 chaperone, AAA+
modules {Escherichia coli [TaxId: 562]}
Length = 315
Score = 101 bits (251), Expect = 1e-23
Identities = 49/298 (16%), Positives = 107/298 (35%), Gaps = 29/298 (9%)
Query: 337 IQSEENLDLTQAAKILDDDHYGMEDVKKRILEFIAVSQLKGTTQGK---ILCFYGPPGVG 393
+ + L L +G + + + E I +++ + K F GP GVG
Sbjct: 5 VSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVG 64
Query: 394 KTSIAKSIARALNREYFRFSVGGMSD---VAEIKGHRRTYVGAMPGKVIQCMKKTKTENP 450
KT + +++AL E RF + + V+ + G YVG G ++ K +
Sbjct: 65 KTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVI-KHPHA 123
Query: 451 LVLIDEVDKIGKGYSGDPASALLEMLDPEQNANFLDHYLDVPVDLSRVLFICTAN----- 505
++L+DE++K + + N D V V + T
Sbjct: 124 VLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGL 183
Query: 506 ------------VIDTIPEPLRDRMEMIDVSGYVAEEKVA-IAAQYLIPQAMKESGLSPE 552
+ R+R++ I +++ + + + ++++ ++
Sbjct: 184 IHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVS 243
Query: 553 QITLEPSAIQVLIKNYCRESGVRNLQKHIEK-VTRKVALTIVK---KESDKVTVTNDN 606
+ + + K Y R G R + + I+ + + +A ++ + +VTV D
Sbjct: 244 LEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDK 301
>d1rrea_ d.14.1.10 (A:) ATP-dependent protease Lon (La), catalytic
domain {Escherichia coli [TaxId: 562]}
Length = 182
Score = 90.2 bits (223), Expect = 4e-21
Identities = 49/101 (48%), Positives = 72/101 (71%)
Query: 685 AVKKDGPSAGITITTALVSLATGKPIKQNLAMTGEISLVGKVLPVGGIKEKTIAAKRVGV 744
A KDGP+AGI + TALVS TG P++ ++AMTGEI+L G+VLP+GG+KEK +AA R G+
Sbjct: 79 ATPKDGPAAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAAHRGGI 138
Query: 745 HTILMPEENKKDFTDLPEYIREGLNVHFVSEWRQVYDLVFE 785
T+L+P ENK+D ++P+ + L++H V +V L +
Sbjct: 139 KTVLIPFENKRDLEEIPDNVIADLDIHPVKRIEEVLTLALQ 179
Score = 74.8 bits (183), Expect = 7e-16
Identities = 60/135 (44%), Positives = 79/135 (58%), Gaps = 13/135 (9%)
Query: 937 FSGSTLFIETSVRKPTSVATDPADDKKSDGSLFLTGHLGDVMKESANISLTVARNFLSTI 996
G L IET+ G L TG LG+VM+ES +LTV R +
Sbjct: 13 VGGDLLTIETACVP-------------GKGKLTYTGSLGEVMQESIQAALTVVRARAEKL 59
Query: 997 EPDNTFLNTRHLHLHVPEGAVKKDGPSAGITITTALVSLATGKPIKQNLAMTGEISLVGK 1056
+ F R +H+HVPEGA KDGP+AGI + TALVS TG P++ ++AMTGEI+L G+
Sbjct: 60 GINPDFYEKRDIHVHVPEGATPKDGPAAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQ 119
Query: 1057 VLPVGGIKEKTIALK 1071
VLP+GG+KEK +A
Sbjct: 120 VLPIGGLKEKLLAAH 134
>d1r7ra3 c.37.1.20 (A:471-735) Membrane fusion ATPase VCP/p97 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 265
Score = 87.2 bits (215), Expect = 2e-19
Identities = 52/259 (20%), Positives = 90/259 (34%), Gaps = 23/259 (8%)
Query: 354 DDHYGMEDVKKRILEFIAVSQLK-------GTTQGKILCFYGPPGVGKTSIAKSIARALN 406
+D G+EDVK+ + E + G T K + FYGPPG GKT +AK+IA
Sbjct: 7 EDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQ 66
Query: 407 REYFRFSVGGMSDVAEIKGHRRTYVGAMPGKVIQCMKKTKTENPLVL-IDEVDKIGKGYS 465
+ ++ + G V + K + P VL DE+D I K
Sbjct: 67 ANFISIK---GPELLT------MWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARG 117
Query: 466 GDPASALLEMLDPEQNANFLDHYLDVPVDLSRVLFICTANVIDTIPEPLRDR---MEMID 522
G+ ++ N + +D V I N D I + ++I
Sbjct: 118 GNIGDGGGAA---DRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIY 174
Query: 523 VSGYVAEEKVAIAAQYLIPQAMKESGLSPEQITLEPSAIQVLIKNYCRESGVRNLQKHIE 582
+ + +VAI L + + + + C+ + +++ IE
Sbjct: 175 IPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIE 234
Query: 583 KVTRKVALTIVKKESDKVT 601
R+ + +V
Sbjct: 235 SEIRRERERQTNPSAMEVE 253
>d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal
domain {Aeropyrum pernix [TaxId: 56636]}
Length = 287
Score = 87.1 bits (214), Expect = 3e-19
Identities = 34/281 (12%), Positives = 78/281 (27%), Gaps = 38/281 (13%)
Query: 350 KILDDDH-----YGMEDVKKRILEFIAVSQLKGTTQGKI---LCFYGPPGVGKTSIAKSI 401
++ D+++ + + L G + G G+GKT++AK
Sbjct: 7 RVFDENYIPPELRVRRGEAEALARIYLNRLLSGAGLSDVNMIYGSIGRVGIGKTTLAKFT 66
Query: 402 ARALNREYFRFSV----------------GGMSDVAEIKGHRRTYVGAMPG---KVIQCM 442
+ ++ + + +S + G+ GA K +
Sbjct: 67 VKRVSEAAAKEGLTVKQAYVNAFNAPNLYTILSLIVRQTGYPIQVRGAPALDILKALVDN 126
Query: 443 KKTKTENPLVLIDEVDKIGKG-YSGDPASALLEMLDPEQNANFLDHYLDVPVDLSRVLFI 501
+ LV++DE + L + E + + + + S V +
Sbjct: 127 LYVENHYLLVILDEFQSMLSSPRIAAEDLYTLLRVHEEIPSRDGVNRIGFLLVASDVRAL 186
Query: 502 CTANVIDTIPEPLRDRMEMIDVSGYVAEEKVAIAAQYLIPQAMKESGLSPEQITLEPSAI 561
+ IP+ + + Y + E I Q EP +
Sbjct: 187 SYMR--EKIPQVESQIGFKLHLPAYKSRELYTILEQRAELGLRD--------TVWEPRHL 236
Query: 562 QVLIKNYCRESGVRNLQKHIEKVTRKVALTIVKKESDKVTV 602
+++ Y + G + + D ++
Sbjct: 237 ELISDVYGEDKGGDGSARRAIVALKMACEMAEAMGRDSLSE 277
>d1xhka_ d.14.1.10 (A:) ATP-dependent protease Lon (La), catalytic
domain {Methanococcus jannaschii [TaxId: 2190]}
Length = 185
Score = 69.8 bits (170), Expect = 4e-14
Identities = 36/102 (35%), Positives = 54/102 (52%), Gaps = 5/102 (4%)
Query: 684 MAVKKDGPSAGITITTALVSLATGKPIKQNLAMTGEISLVGKVLPVGGIKEKTIAAKRVG 743
K DG SA + A++S P+KQ+ A+TG + L G VL +GG+ EK AAKR G
Sbjct: 87 SYSKIDGDSATAAVCLAIISALLDIPLKQDFAITGSLDLSGNVLAIGGVNEKIEAAKRYG 146
Query: 744 VHTILMPEENKKDFTDLPEYIREGLNVHFVSEWRQVYDLVFE 785
+++PE N D + EG+ + V ++ LVF+
Sbjct: 147 FKRVIIPEANMIDVIE-----TEGIEIIPVKTLDEIVPLVFD 183
Score = 31.7 bits (71), Expect = 0.38
Identities = 11/47 (23%), Positives = 17/47 (36%), Gaps = 6/47 (12%)
Query: 674 GVVMGLAWTAMAVKKDGPSAGITITTALVSLATGKPIKQNLAMTGEI 720
GV+ GLA G + L + P L ++G+I
Sbjct: 5 GVIYGLAVLGA------GGIGDVTKIIVQILESKNPGTHLLNISGDI 45
>d1w44a_ c.37.1.11 (A:) NTPase P4 {Bacteriophage phi-12 [TaxId:
161736]}
Length = 321
Score = 72.0 bits (176), Expect = 6e-14
Identities = 36/293 (12%), Positives = 84/293 (28%), Gaps = 36/293 (12%)
Query: 306 ELAKLGFLESHSSEFNVTRNYLDWLTSLPWGIQS-------EENLDLTQAAKILDDDHY- 357
+ +G + F+ + + EN + Q + D
Sbjct: 45 PVLAIGVESGDAIVFDKNAQRIVAYKEKSVKAEDGSVSVVQVENGFMKQGHRGWLVDLTG 104
Query: 358 GMEDVKKRILEFIAVSQLKGTTQGKILCFYGPPGVGKTSIAKSIARALNREYFRFSVGGM 417
+ + EF G ++ G GKT + ++ AL + +V
Sbjct: 105 ELVGCSPVVAEFGGHRYASG-----MVIVTGKGNSGKTPLVHALGEALGGKDKYATVRF- 158
Query: 418 SDVAEIKGHRRTYVGAMPGKVIQCMKKTKTENPLVLIDEVDKIGKGYSGDPASALLEMLD 477
E Y V + ++ +++ID + + G+ S
Sbjct: 159 ---GEPLSG---YNTDFNVFVDDIARAML-QHRVIVIDSLKNVIGAAGGNTTSG-----G 206
Query: 478 PEQNANFLDHYLDVPVDLSRVLFICTAN---VIDTIPEPLRD---RMEMIDVSGYVAEEK 531
+ A L + + I + N D I E +++ V + +
Sbjct: 207 ISRGAFDLLSDIGAMAASRGCVVIASLNPTSNDDKIVELVKEASRSNSTSLVISTDVDGE 266
Query: 532 VAIAAQYLIPQAMKESGLSPEQITLEPSAIQVLIKNYCRESGVRNLQKHIEKV 584
+ + + ++ + Q + ++ + + G + K I+ V
Sbjct: 267 WQVLTRTG--EGLQRLTHTL-QTSYGEHSVLTIHTSKQS-GGKQASGKAIQTV 315
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide
biosynthesis protein MobB {Escherichia coli [TaxId:
562]}
Length = 170
Score = 68.1 bits (165), Expect = 1e-13
Identities = 26/161 (16%), Positives = 50/161 (31%), Gaps = 13/161 (8%)
Query: 382 KILCFYGPPGVGKTSIAKSIARALNREYFRFSV-----------GGMSDVAEIKGHRRTY 430
+L F G GKT++ K + AL R + D E++
Sbjct: 3 PLLAFAAWSGTGKTTLLKKLIPALCARGIRPGLIKHTHHDMDVDKPGKDSYELRKAGAAQ 62
Query: 431 VGAMPGKVIQCMKKTKTENPLVLIDEVDKIGKGYSGDPASALLEMLDPEQNANFLDHYLD 490
+ M +T E L L ++ + + + F D
Sbjct: 63 TIVASQQRWALMTETPDEEELDLQFLASRMDTSKLDLILVEGFKHEEIAKIVLFRDGAGH 122
Query: 491 VPVDLSRVLFICT--ANVIDTIPEPLRDRMEMIDVSGYVAE 529
P +L + ++V + L D ++ ++ +V E
Sbjct: 123 RPEELVIDRHVIAVASDVPLNLDVALLDINDVEGLADFVVE 163
>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 39
Score = 61.2 bits (149), Expect = 9e-13
Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Query: 817 TGEKPYVCGEAGCDKSFASATNYKNHMR-IHSGEKPYVCQV 856
+ KPY+C C K F+ + H++ +H+ E+P+ CQV
Sbjct: 1 SVGKPYICQS--CGKGFSRPDHLNGHIKQVHTSERPHKCQV 39
Score = 54.6 bits (132), Expect = 2e-10
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Query: 1160 SGIRPYKCPVEYCEKAFSTQYSRKAHIR-THTGEKPYRC 1197
S +PY C + C K FS HI+ HT E+P++C
Sbjct: 1 SVGKPYIC--QSCGKGFSRPDHLNGHIKQVHTSERPHKC 37
Score = 49.6 bits (119), Expect = 1e-08
Identities = 11/39 (28%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
Query: 787 TSERPFPCPVLGCDRSFTTSNIRKVHIR-THTGEKPYVC 824
+ +P+ C C + F+ + HI+ HT E+P+ C
Sbjct: 1 SVGKPYICQS--CGKGFSRPDHLNGHIKQVHTSERPHKC 37
Score = 48.8 bits (117), Expect = 2e-08
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Query: 1139 CPECKKTFSSAHHMKVHLR-IHSGIRPYKCPV 1169
C C K FS H+ H++ +H+ RP+KC V
Sbjct: 8 CQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39
Score = 43.4 bits (103), Expect = 2e-06
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 3/40 (7%)
Query: 847 SGEKPYVCQVRDCQKRFTEYSSLYKHT-LVHSDIRPFICD 885
S KPY+CQ C K F+ L H VH+ RP C
Sbjct: 1 SVGKPYICQ--SCGKGFSRPDHLNGHIKQVHTSERPHKCQ 38
Score = 42.7 bits (101), Expect = 4e-06
Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 3/34 (8%)
Query: 1190 TGEKPYRCAHEFCSKSFKTSGDLQKHVR-THTDE 1222
+ KPY C + C K F L H++ HT E
Sbjct: 1 SVGKPYIC--QSCGKGFSRPDHLNGHIKQVHTSE 32
Score = 31.5 bits (72), Expect = 0.031
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 880 RPFICDRCPRSYRQLCTLNVHKKTNH 905
+P+IC C + + + LN H K H
Sbjct: 4 KPYICQSCGKGFSRPDHLNGHIKQVH 29
>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 61.3 bits (149), Expect = 1e-12
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 822 YVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQ 855
+ C E C KSF + K HM++HS + Y+C+
Sbjct: 2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE 35
Score = 58.6 bits (142), Expect = 8e-12
Identities = 10/33 (30%), Positives = 18/33 (54%)
Query: 1165 YKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 1197
+ CP C K+F+ + K H++ H+ + Y C
Sbjct: 2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYIC 34
Score = 55.1 bits (133), Expect = 1e-10
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 792 FPCPVLGCDRSFTTSNIRKVHIRTHTGEKPYVC 824
F CP C +SF K H++ H+ + Y+C
Sbjct: 2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYIC 34
Score = 49.0 bits (117), Expect = 2e-08
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Query: 1138 VCPE--CKKTFSSAHHMKVHLRIHSGIRPYKC 1167
CPE C K+F+ H+K H+++HS R Y C
Sbjct: 3 SCPEPACGKSFNFKKHLKEHMKLHSDTRDYIC 34
Score = 44.3 bits (105), Expect = 9e-07
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 1195 YRCAHEFCSKSFKTSGDLQKHVRTHTDE 1222
+ C C KSF L++H++ H+D
Sbjct: 2 FSCPEPACGKSFNFKKHLKEHMKLHSDT 29
Score = 43.2 bits (102), Expect = 2e-06
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 852 YVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICD 885
+ C C K F L +H +HSD R +IC+
Sbjct: 2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE 35
>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo
sapiens) [TaxId: 9606]}
Length = 36
Score = 60.5 bits (147), Expect = 2e-12
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Query: 1187 RTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTDE 1222
RTHTGEKPY C C K+F+ L H + + D
Sbjct: 1 RTHTGEKPYAC--SHCDKTFRQKQLLDMHFKRYHDP 34
Score = 60.1 bits (146), Expect = 2e-12
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Query: 814 RTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEK 850
RTHTGEKPY C CDK+F H + +
Sbjct: 1 RTHTGEKPYACSH--CDKTFRQKQLLDMHFKRYHDPN 35
Score = 51.6 bits (124), Expect = 2e-09
Identities = 10/37 (27%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Query: 1157 RIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEK 1193
R H+G +PY C +C+K F + H + +
Sbjct: 1 RTHTGEKPYAC--SHCDKTFRQKQLLDMHFKRYHDPN 35
Score = 49.3 bits (118), Expect = 1e-08
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Query: 844 RIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSD 878
R H+GEKPY C C K F + L H + D
Sbjct: 1 RTHTGEKPYACS--HCDKTFRQKQLLDMHFKRYHD 33
Score = 43.9 bits (104), Expect = 1e-06
Identities = 9/35 (25%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Query: 786 HTSERPFPCPVLGCDRSFTTSNIRKVHIRTHTGEK 820
HT E+P+ C CD++F + +H + +
Sbjct: 3 HTGEKPYACSH--CDKTFRQKQLLDMHFKRYHDPN 35
Score = 38.5 bits (90), Expect = 9e-05
Identities = 10/34 (29%), Positives = 19/34 (55%)
Query: 875 VHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRES 908
H+ +P+ C C +++RQ L++H K H +
Sbjct: 2 THTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN 35
Score = 36.2 bits (84), Expect = 7e-04
Identities = 6/23 (26%), Positives = 10/23 (43%)
Query: 1139 CPECKKTFSSAHHMKVHLRIHSG 1161
C C KTF + +H + +
Sbjct: 11 CSHCDKTFRQKQLLDMHFKRYHD 33
>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 33
Score = 59.6 bits (145), Expect = 3e-12
Identities = 16/34 (47%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
Query: 816 HTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGE 849
H+GEKPY C E C K+F+ ++ H R+H+GE
Sbjct: 2 HSGEKPYGCVE--CGKAFSRSSILVQHQRVHTGE 33
Score = 55.7 bits (135), Expect = 7e-11
Identities = 17/34 (50%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Query: 1189 HTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTDE 1222
H+GEKPY C C K+F S L +H R HT E
Sbjct: 2 HSGEKPYGC--VECGKAFSRSSILVQHQRVHTGE 33
Score = 52.6 bits (127), Expect = 8e-10
Identities = 18/35 (51%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Query: 1158 IHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGE 1192
IHSG +PY C C KAFS H R HTGE
Sbjct: 1 IHSGEKPYGC--VECGKAFSRSSILVQHQRVHTGE 33
Score = 47.2 bits (113), Expect = 8e-08
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Query: 786 HTSERPFPCPVLGCDRSFTTSNIRKVHIRTHTGE 819
H+ E+P+ C C ++F+ S+I H R HTGE
Sbjct: 2 HSGEKPYGCVE--CGKAFSRSSILVQHQRVHTGE 33
Score = 46.1 bits (110), Expect = 2e-07
Identities = 17/33 (51%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Query: 845 IHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHS 877
IHSGEKPY C +C K F+ S L +H VH+
Sbjct: 1 IHSGEKPYGCV--ECGKAFSRSSILVQHQRVHT 31
Score = 39.1 bits (92), Expect = 5e-05
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 1139 CPECKKTFSSAHHMKVHLRIHSG 1161
C EC K FS + + H R+H+G
Sbjct: 10 CVECGKAFSRSSILVQHQRVHTG 32
Score = 34.9 bits (81), Expect = 0.002
Identities = 7/29 (24%), Positives = 16/29 (55%)
Query: 875 VHSDIRPFICDRCPRSYRQLCTLNVHKKT 903
+HS +P+ C C +++ + L H++
Sbjct: 1 IHSGEKPYGCVECGKAFSRSSILVQHQRV 29
>d1qvra3 c.37.1.20 (A:536-850) ClpB, AAA+ modules {Thermus
thermophilus [TaxId: 274]}
Length = 315
Score = 65.5 bits (159), Expect = 8e-12
Identities = 50/302 (16%), Positives = 98/302 (32%), Gaps = 33/302 (10%)
Query: 337 IQSEENLDLTQAAKILDDDHYGMEDVKKRILEFIAVSQLKGTTQGK---ILCFYGPPGVG 393
+ E L + + L G ++ + + + I ++ + F GP GVG
Sbjct: 6 LLEGEREKLLRLEEELHKRVVGQDEAIRAVADAIRRARAGLKDPNRPIGSFLFLGPTGVG 65
Query: 394 KTSIAKSIARALN------REYFRFSVGGMSDVAEIKGHRRTYVGAMPGKVIQCMKKTKT 447
KT +AK++A L V+ + G YVG G + +
Sbjct: 66 KTELAKTLAATLFDTEEAMIRIDMTEYMEKHAVSRLIGAPPGYVGYEEGGQL-TEAVRRR 124
Query: 448 ENPLVLIDEVDKIGKGYSGDPASALLE------------------MLDPEQNANFLDHYL 489
++L DE++K L + +L + + L
Sbjct: 125 PYSVILFDEIEKAHPDVFNILLQILDDGRLTDSHGRTVDFRNTVIILTSNLGSPLILEGL 184
Query: 490 DVPVDLSRVLFICTANVIDTIPEPLRDRMEMIDVSGYVAEEKVAIAAQYLIPQAMKESGL 549
R+ + +R++ I V + +E++ + +
Sbjct: 185 QKGWPYERIRDEVFKVLQQHFRPEFLNRLDEIVVFRPLTKEQIRQIVEIQLSYLRARLAE 244
Query: 550 SPEQITLEPSAIQVLIKN-YCRESGVRNLQKHIEK-VTRKVALTIVK---KESDKVTVTN 604
+ L +A L + Y G R L++ I++ + +A I+ KE D+V V
Sbjct: 245 KRISLELTEAAKDFLAERGYDPVFGARPLRRVIQRELETPLAQKILAGEVKEGDRVQVDV 304
Query: 605 DN 606
Sbjct: 305 GP 306
>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 47
Score = 58.0 bits (140), Expect = 2e-11
Identities = 9/39 (23%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 812 HIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEK 850
+++ +K + C GC K+F N ++H++ H ++
Sbjct: 10 YVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47
Score = 51.5 bits (123), Expect = 3e-09
Identities = 10/44 (22%), Positives = 22/44 (50%), Gaps = 5/44 (11%)
Query: 1150 HHMKVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEK 1193
++K + ++C C K F +Y+ ++HI+TH ++
Sbjct: 9 KYVK-----EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47
Score = 51.1 bits (122), Expect = 5e-09
Identities = 10/42 (23%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 1181 SRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTDE 1222
S +++ +K + C C+K+FK +++ H++TH ++
Sbjct: 6 SIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED 46
Score = 49.2 bits (117), Expect = 2e-08
Identities = 9/35 (25%), Positives = 17/35 (48%)
Query: 786 HTSERPFPCPVLGCDRSFTTSNIRKVHIRTHTGEK 820
++ F C GC ++F + HI+TH ++
Sbjct: 13 EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47
Score = 43.8 bits (103), Expect = 2e-06
Identities = 7/37 (18%), Positives = 12/37 (32%)
Query: 841 NHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHS 877
+ +K + C C K F ++ H H
Sbjct: 8 DKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHL 44
Score = 29.5 bits (66), Expect = 0.23
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 1139 CPECKKTFSSAHHMKVHLRIHSGIR 1163
P C KTF ++++ H++ H R
Sbjct: 23 FPGCTKTFKRRYNIRSHIQTHLEDR 47
>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing
protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}
Length = 38
Score = 57.5 bits (139), Expect = 2e-11
Identities = 11/38 (28%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Query: 812 HIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGE 849
+ Y C E G SF+ +++ H R H+GE
Sbjct: 3 SEWQQRERRRYKCDECGK--SFSHSSDLSKHRRTHTGE 38
Score = 55.2 bits (133), Expect = 1e-10
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Query: 1185 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTDE 1222
+ Y+C + C KSF S DL KH RTHT E
Sbjct: 3 SEWQQRERRRYKC--DECGKSFSHSSDLSKHRRTHTGE 38
Score = 50.9 bits (122), Expect = 4e-09
Identities = 15/38 (39%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Query: 1155 HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGE 1192
R YKC + C K+FS H RTHTGE
Sbjct: 3 SEWQQRERRRYKC--DECGKSFSHSSDLSKHRRTHTGE 38
Score = 46.7 bits (111), Expect = 1e-07
Identities = 10/36 (27%), Positives = 14/36 (38%), Gaps = 2/36 (5%)
Query: 842 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHS 877
+ Y C +C K F+ S L KH H+
Sbjct: 3 SEWQQRERRRYKCD--ECGKSFSHSSDLSKHRRTHT 36
Score = 43.2 bits (102), Expect = 2e-06
Identities = 13/34 (38%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Query: 786 HTSERPFPCPVLGCDRSFTTSNIRKVHIRTHTGE 819
R + C G SF+ S+ H RTHTGE
Sbjct: 7 QRERRRYKCDECGK--SFSHSSDLSKHRRTHTGE 38
Score = 34.8 bits (80), Expect = 0.002
Identities = 9/37 (24%), Positives = 18/37 (48%)
Query: 871 KHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRE 907
+ + R + CD C +S+ L+ H++T+ E
Sbjct: 2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE 38
Score = 32.8 bits (75), Expect = 0.012
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 1139 CPECKKTFSSAHHMKVHLRIHSG 1161
C EC K+FS + + H R H+G
Sbjct: 15 CDECGKSFSHSSDLSKHRRTHTG 37
>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo
sapiens) [TaxId: 9606]}
Length = 36
Score = 56.9 bits (138), Expect = 3e-11
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Query: 1187 RTHTGEKPYRCAHEFCSKSFKTSGDLQKHV-RTHTDE 1222
RTH+GEKPY C C F SG ++ H+ + HT+
Sbjct: 1 RTHSGEKPYEC--YICHARFTQSGTMKMHILQKHTEN 35
Score = 54.2 bits (131), Expect = 2e-10
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
Query: 814 RTHTGEKPYVCGEAGCDKSFASATNYKNH-MRIHSGE 849
RTH+GEKPY C C F + K H ++ H+
Sbjct: 1 RTHSGEKPYECYI--CHARFTQSGTMKMHILQKHTEN 35
Score = 47.3 bits (113), Expect = 7e-08
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
Query: 1157 RIHSGIRPYKCPVEYCEKAFSTQYSRKAHI-RTHTGE 1192
R HSG +PY+C C F+ + K HI + HT
Sbjct: 1 RTHSGEKPYEC--YICHARFTQSGTMKMHILQKHTEN 35
Score = 46.1 bits (110), Expect = 2e-07
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Query: 844 RIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVH 876
R HSGEKPY C C RFT+ ++ H L
Sbjct: 1 RTHSGEKPYECY--ICHARFTQSGTMKMHILQK 31
Score = 40.0 bits (94), Expect = 3e-05
Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Query: 786 HTSERPFPCPVLGCDRSFTTSNIRKVHIRTHTGEK 820
H+ E+P+ C + C FT S K+HI E
Sbjct: 3 HSGEKPYECYI--CHARFTQSGTMKMHILQKHTEN 35
Score = 36.1 bits (84), Expect = 7e-04
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 875 VHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRE 907
HS +P+ C C + Q T+ +H H E
Sbjct: 2 THSGEKPYECYICHARFTQSGTMKMHILQKHTE 34
Score = 32.3 bits (74), Expect = 0.017
Identities = 8/24 (33%), Positives = 13/24 (54%), Gaps = 1/24 (4%)
Query: 1139 CPECKKTFSSAHHMKVH-LRIHSG 1161
C C F+ + MK+H L+ H+
Sbjct: 11 CYICHARFTQSGTMKMHILQKHTE 34
>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo
sapiens) [TaxId: 9606]}
Length = 53
Score = 56.6 bits (136), Expect = 6e-11
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Query: 1163 RPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTH 1219
+ Y C C K+F+ + R H+ H G +PY C C K FK L H++ H
Sbjct: 2 KLYPCQ---CGKSFTHKSQRDRHMSMHLGLRPYGC--GVCGKKFKMKHHLVGHMKIH 53
Score = 56.2 bits (135), Expect = 8e-11
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Query: 789 ERPFPCPVLGCDRSFTTSNIRKVHIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIH 846
++ +PC C +SFT + R H+ H G +PY CG C K F + HM+IH
Sbjct: 1 DKLYPCQ---CGKSFTHKSQRDRHMSMHLGLRPYGCGV--CGKKFKMKHHLVGHMKIH 53
Score = 55.8 bits (134), Expect = 1e-10
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Query: 849 EKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKT 903
+K Y CQ C K FT S +H +H +RP+ C C + ++ L H K
Sbjct: 1 DKLYPCQ---CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKI 52
Score = 54.7 bits (131), Expect = 3e-10
Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 5/58 (8%)
Query: 819 EKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVH 876
+K Y C C KSF + HM +H G +PY C V C K+F L H +H
Sbjct: 1 DKLYPCQ---CGKSFTHKSQRDRHMSMHLGLRPYGCGV--CGKKFKMKHHLVGHMKIH 53
Score = 51.6 bits (123), Expect = 3e-09
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Query: 1141 ECKKTFSSAHHMKVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTH 1189
+C K+F+ H+ +H G+RPY C C K F ++ H++ H
Sbjct: 7 QCGKSFTHKSQRDRHMSMHLGLRPYGC--GVCGKKFKMKHHLVGHMKIH 53
Score = 37.0 bits (85), Expect = 6e-04
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 1136 NNVCPECKKTFSSAHHMKVHLRIH 1159
C C K F HH+ H++IH
Sbjct: 30 PYGCGVCGKKFKMKHHLVGHMKIH 53
Score = 36.2 bits (83), Expect = 0.001
Identities = 9/34 (26%), Positives = 12/34 (35%), Gaps = 3/34 (8%)
Query: 1192 EKPYRCAHEFCSKSFKTSGDLQKHVRTHTDEFQM 1225
+K Y C C KSF +H+ H
Sbjct: 1 DKLYPCQ---CGKSFTHKSQRDRHMSMHLGLRPY 31
Score = 27.3 bits (60), Expect = 1.5
Identities = 4/32 (12%), Positives = 10/32 (31%), Gaps = 1/32 (3%)
Query: 880 RPFICDRCPRSYRQLCTLNVHKKTNHRESKNK 911
+ + C C +S+ + H +
Sbjct: 2 KLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYG 32
>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 37
Score = 55.9 bits (135), Expect = 6e-11
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Query: 1185 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHT 1220
R TG KP++C C +SF S L H + H
Sbjct: 2 STRGSTGIKPFQC--PDCDRSFSRSDHLALHRKRHM 35
Score = 55.1 bits (133), Expect = 1e-10
Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Query: 812 HIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIH 846
R TG KP+ C + CD+SF+ + + H + H
Sbjct: 2 STRGSTGIKPFQCPD--CDRSFSRSDHLALHRKRH 34
Score = 47.8 bits (114), Expect = 5e-08
Identities = 11/35 (31%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Query: 842 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVH 876
R +G KP+ C DC + F+ L H H
Sbjct: 2 STRGSTGIKPFQCP--DCDRSFSRSDHLALHRKRH 34
Score = 47.0 bits (112), Expect = 9e-08
Identities = 10/37 (27%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Query: 1155 HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTG 1191
R +GI+P++C C+++FS H + H
Sbjct: 2 STRGSTGIKPFQC--PDCDRSFSRSDHLALHRKRHML 36
Score = 36.2 bits (84), Expect = 6e-04
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 872 HTLVHSDIRPFICDRCPRSYRQLCTLNVHKKT 903
T + I+PF C C RS+ + L +H+K
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKR 33
Score = 36.2 bits (84), Expect = 7e-04
Identities = 11/33 (33%), Positives = 16/33 (48%), Gaps = 2/33 (6%)
Query: 786 HTSERPFPCPVLGCDRSFTTSNIRKVHIRTHTG 818
T +PF CP RSF+ S+ +H + H
Sbjct: 6 STGIKPFQCPDCD--RSFSRSDHLALHRKRHML 36
Score = 32.0 bits (73), Expect = 0.019
Identities = 8/24 (33%), Positives = 16/24 (66%)
Query: 1139 CPECKKTFSSAHHMKVHLRIHSGI 1162
CP+C ++FS + H+ +H + H +
Sbjct: 14 CPDCDRSFSRSDHLALHRKRHMLV 37
>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 31
Score = 53.5 bits (129), Expect = 5e-10
Identities = 15/31 (48%), Positives = 18/31 (58%)
Query: 1163 RPYKCPVEYCEKAFSTQYSRKAHIRTHTGEK 1193
RP+ C YC K F+ + H RTHTGEK
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 52.7 bits (127), Expect = 9e-10
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 820 KPYVCGEAGCDKSFASATNYKNHMRIHSGEK 850
+P++C + C K F + + H R H+GEK
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 49.2 bits (118), Expect = 1e-08
Identities = 14/30 (46%), Positives = 19/30 (63%)
Query: 1193 KPYRCAHEFCSKSFKTSGDLQKHVRTHTDE 1222
+P+ C +C K F S +LQ+H RTHT E
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGE 30
Score = 47.7 bits (114), Expect = 5e-08
Identities = 16/31 (51%), Positives = 19/31 (61%)
Query: 790 RPFPCPVLGCDRSFTTSNIRKVHIRTHTGEK 820
RPF C C + FT S+ + H RTHTGEK
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 38.1 bits (89), Expect = 1e-04
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 850 KPYVCQVRDCQKRFTEYSSLYKHTLVHS 877
+P++C C KRFT L +H H+
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTHT 28
Score = 36.9 bits (86), Expect = 3e-04
Identities = 7/23 (30%), Positives = 12/23 (52%)
Query: 1139 CPECKKTFSSAHHMKVHLRIHSG 1161
C K F+ + ++ H R H+G
Sbjct: 7 WSYCGKRFTRSDELQRHKRTHTG 29
>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 30
Score = 52.0 bits (125), Expect = 1e-09
Identities = 14/30 (46%), Positives = 19/30 (63%)
Query: 820 KPYVCGEAGCDKSFASATNYKNHMRIHSGE 849
KP+ C GC KS++ N K H+R H+GE
Sbjct: 1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE 30
Score = 50.8 bits (122), Expect = 3e-09
Identities = 14/30 (46%), Positives = 21/30 (70%)
Query: 1163 RPYKCPVEYCEKAFSTQYSRKAHIRTHTGE 1192
+P+KC E C K++S + K H+R+HTGE
Sbjct: 1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE 30
Score = 50.0 bits (120), Expect = 6e-09
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 1193 KPYRCAHEFCSKSFKTSGDLQKHVRTHTDE 1222
KP++C E C KS+ +L+ H+R+HT E
Sbjct: 1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE 30
Score = 45.4 bits (108), Expect = 3e-07
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 790 RPFPCPVLGCDRSFTTSNIRKVHIRTHTGE 819
+P C GC +S++ K H+R+HTGE
Sbjct: 1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE 30
Score = 37.3 bits (87), Expect = 2e-04
Identities = 8/28 (28%), Positives = 14/28 (50%)
Query: 850 KPYVCQVRDCQKRFTEYSSLYKHTLVHS 877
KP+ C C+K ++ +L H H+
Sbjct: 1 KPHKCTFEGCRKSYSRLENLKTHLRSHT 28
Score = 35.4 bits (82), Expect = 0.001
Identities = 10/25 (40%), Positives = 16/25 (64%), Gaps = 2/25 (8%)
Query: 1139 CPE--CKKTFSSAHHMKVHLRIHSG 1161
C C+K++S ++K HLR H+G
Sbjct: 5 CTFEGCRKSYSRLENLKTHLRSHTG 29
>d1ixsb2 c.37.1.20 (B:4-242) Holliday junction helicase RuvB
{Thermus thermophilus [TaxId: 274]}
Length = 239
Score = 57.7 bits (138), Expect = 2e-09
Identities = 31/168 (18%), Positives = 64/168 (38%), Gaps = 17/168 (10%)
Query: 354 DDHYGMEDVKKRILEFIAVSQLKGTTQGKILCFYGPPGVGKTSIAKSIARALNREYFRFS 413
D++ G E +K+++ ++ ++ + +L +GPPG+GKT++A IA L S
Sbjct: 9 DEYIGQERLKQKLRVYLEAAKARKEPLEHLL-LFGPPGLGKTTLAHVIAHELGVNLRVTS 67
Query: 414 VGGMSDVAEIKGHRRTYVGAMPGKVIQCMKKTKTENPLVLIDEVDKIGKGYSGDPASALL 473
+ G + + + E ++ IDE+ ++ + A +
Sbjct: 68 GPAIEKP---------------GDLAAILANSLEEGDILFIDEIHRLSRQAEEHLYPA-M 111
Query: 474 EMLDPEQNANFLDHYLDVPVDLSRVLFICTANVIDTIPEPLRDRMEMI 521
E + + ++L R I I PL R ++
Sbjct: 112 EDFVMDIVIGQGPAARTIRLELPRFTLIGATTRPGLITAPLLSRFGIV 159
>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 35
Score = 51.7 bits (124), Expect = 2e-09
Identities = 10/34 (29%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Query: 1189 HTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTDE 1222
+G++P+ C C +F T + +H++ HTD
Sbjct: 2 SSGKRPFVC--RICLSAFTTKANCARHLKVHTDT 33
Score = 49.8 bits (119), Expect = 9e-09
Identities = 9/34 (26%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Query: 816 HTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGE 849
+G++P+VC C +F + N H+++H+
Sbjct: 2 SSGKRPFVCRI--CLSAFTTKANCARHLKVHTDT 33
Score = 43.6 bits (103), Expect = 2e-06
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Query: 1159 HSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGE 1192
SG RP+ C C AF+T+ + H++ HT
Sbjct: 2 SSGKRPFVC--RICLSAFTTKANCARHLKVHTDT 33
Score = 41.3 bits (97), Expect = 1e-05
Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Query: 786 HTSERPFPCPVLGCDRSFTTSNIRKVHIRTHTGE 819
+ +RPF C + C +FTT H++ HT
Sbjct: 2 SSGKRPFVCRI--CLSAFTTKANCARHLKVHTDT 33
Score = 39.4 bits (92), Expect = 4e-05
Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Query: 846 HSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSD 878
SG++P+VC+ C FT ++ +H VH+D
Sbjct: 2 SSGKRPFVCR--ICLSAFTTKANCARHLKVHTD 32
Score = 34.7 bits (80), Expect = 0.002
Identities = 6/23 (26%), Positives = 12/23 (52%)
Query: 1139 CPECKKTFSSAHHMKVHLRIHSG 1161
C C F++ + HL++H+
Sbjct: 10 CRICLSAFTTKANCARHLKVHTD 32
Score = 32.4 bits (74), Expect = 0.014
Identities = 9/33 (27%), Positives = 14/33 (42%), Gaps = 1/33 (3%)
Query: 876 HSDIRPFICDRCPRSYRQLCTLNVHKKTNHRES 908
S RPF+C C ++ H K H ++
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKV-HTDT 33
>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 32
Score = 51.2 bits (123), Expect = 3e-09
Identities = 11/31 (35%), Positives = 20/31 (64%)
Query: 1192 EKPYRCAHEFCSKSFKTSGDLQKHVRTHTDE 1222
++PY C H C K+F + DL +H ++H ++
Sbjct: 1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK 31
Score = 50.4 bits (121), Expect = 6e-09
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 1163 RPYKCPVEYCEKAFSTQYSRKAHIRTHTGE 1192
RPY C C+KAF + H ++H +
Sbjct: 2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK 31
Score = 50.4 bits (121), Expect = 6e-09
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 819 EKPYVCGEAGCDKSFASATNYKNHMRIHSGE 849
++PY C GCDK+F + H + H +
Sbjct: 1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK 31
Score = 47.7 bits (114), Expect = 5e-08
Identities = 9/31 (29%), Positives = 18/31 (58%)
Query: 789 ERPFPCPVLGCDRSFTTSNIRKVHIRTHTGE 819
+RP+ C GCD++F ++ H ++H +
Sbjct: 1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK 31
Score = 41.9 bits (99), Expect = 6e-06
Identities = 9/29 (31%), Positives = 12/29 (41%)
Query: 849 EKPYVCQVRDCQKRFTEYSSLYKHTLVHS 877
++PY C C K F L +H H
Sbjct: 1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQ 29
Score = 34.6 bits (80), Expect = 0.002
Identities = 7/26 (26%), Positives = 9/26 (34%), Gaps = 2/26 (7%)
Query: 1138 VCPE--CKKTFSSAHHMKVHLRIHSG 1161
C C K F H + H + H
Sbjct: 5 SCDHPGCDKAFVRNHDLIRHKKSHQE 30
>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 50.8 bits (122), Expect = 3e-09
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 1193 KPYRCAHEFCSKSFKTSGDLQKHVRTHT 1220
+PY C + C+K F S +L+ H+ TH
Sbjct: 1 RPYVCPFDGCNKKFAQSTNLKSHILTHA 28
Score = 49.7 bits (119), Expect = 1e-08
Identities = 13/28 (46%), Positives = 17/28 (60%)
Query: 1163 RPYKCPVEYCEKAFSTQYSRKAHIRTHT 1190
RPY CP + C K F+ + K+HI TH
Sbjct: 1 RPYVCPFDGCNKKFAQSTNLKSHILTHA 28
Score = 49.3 bits (118), Expect = 1e-08
Identities = 13/28 (46%), Positives = 16/28 (57%)
Query: 790 RPFPCPVLGCDRSFTTSNIRKVHIRTHT 817
RP+ CP GC++ F S K HI TH
Sbjct: 1 RPYVCPFDGCNKKFAQSTNLKSHILTHA 28
Score = 47.0 bits (112), Expect = 1e-07
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 820 KPYVCGEAGCDKSFASATNYKNHMRIHS 847
+PYVC GC+K FA +TN K+H+ H+
Sbjct: 1 RPYVCPFDGCNKKFAQSTNLKSHILTHA 28
Score = 38.1 bits (89), Expect = 1e-04
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 850 KPYVCQVRDCQKRFTEYSSLYKHTLVHS 877
+PYVC C K+F + ++L H L H+
Sbjct: 1 RPYVCPFDGCNKKFAQSTNLKSHILTHA 28
Score = 36.6 bits (85), Expect = 4e-04
Identities = 9/25 (36%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
Query: 1138 VCPE--CKKTFSSAHHMKVHLRIHS 1160
VCP C K F+ + ++K H+ H+
Sbjct: 4 VCPFDGCNKKFAQSTNLKSHILTHA 28
>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum
aerophilum [TaxId: 13773]}
Length = 276
Score = 57.1 bits (136), Expect = 4e-09
Identities = 19/267 (7%), Positives = 56/267 (20%), Gaps = 24/267 (8%)
Query: 350 KILDDDH-----YGMEDVKKRILEFIAVSQLKGTTQGKILCFYGPPGVGKTSIAKSIARA 404
+ + E +++ + G PG GKT + +
Sbjct: 7 SVFSPSYVPKRLPHREQQLQQLDILLGNWLRNPGHHYPRATLLGRPGTGKTVTLRKLWEL 66
Query: 405 LNREY-FRFSVGGMSDVAEIKGHRRTYVGAMPGKVIQCMKKTKTENPLVLIDEVDKIGKG 463
+ RF ++ + L+ E +
Sbjct: 67 YKDKTTARFVYINGFIYRNFTAIIGEIARSLNIPFPRRGLSRDEFLA--LLVEHLRERDL 124
Query: 464 YSGDPASALLEMLDPEQNANFLDHYLDVPVDLSRVLFICTANVIDTI-----PEPLRDRM 518
Y + + + R+ + + +
Sbjct: 125 YMFLVLDDAFNLAPDILSTFIRLGQEADKLGAFRIALVIVGHNDAVLNNLDPSTRGIMGK 184
Query: 519 EMIDVSGYVAEEKVAIAAQYLIPQAMKESGLSPEQITLEPSAIQVLIKNYCRESGVRNLQ 578
+I S Y ++ I + + +Q++ ++ + +
Sbjct: 185 YVIRFSPYTKDQIFDILLDRAK--------AGLAEGSYSEDILQMIADITGAQTPLDTNR 236
Query: 579 KHIEK---VTRKVALTIVKKESDKVTV 602
+ + A + +
Sbjct: 237 GDARLAIDILYRSAYAAQQNGRKHIAP 263
>d1e32a2 c.37.1.20 (A:201-458) Membrane fusion ATPase VCP/p97 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 258
Score = 55.8 bits (133), Expect = 7e-09
Identities = 47/270 (17%), Positives = 92/270 (34%), Gaps = 34/270 (12%)
Query: 354 DDHYGMEDVKKRILEFIAVSQLK-------GTTQGKILCFYGPPGVGKTSIAKSIARALN 406
DD G +I E + + G + + YGPPG GKT IA+++A
Sbjct: 4 DDVGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETG 63
Query: 407 REYFRFSVGGMSDVAEIKGHRRTYVGAMPGKVIQCMKKTKTENP-LVLIDEVDKIGKGYS 465
+F + + G + + ++ + P ++ IDE+D I
Sbjct: 64 AFFFLINGPEI---------MSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKRE 114
Query: 466 GDPASALLEMLDPEQNANFLDHYLDVPVDLSRVLFICTANVIDTIPEPLR-----DRMEM 520
++ + L +D + V+ + N ++I LR DR
Sbjct: 115 KTHGEVERRIV------SQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVD 168
Query: 521 IDVSGYVAEEKVAIAAQYLIPQAMKESGLSPEQITLEPSAIQVLIKNYCRESGVRNLQKH 580
I + ++ + A T + C E+ ++ ++K
Sbjct: 169 IGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGAD--LAALCSEAALQAIRKK 226
Query: 581 IEKVTRKVALTIVKKESDKVTVTNDNLSDF 610
++ + + TI + + + VT D DF
Sbjct: 227 MDLIDLEDE-TIDAEVMNSLAVTMD---DF 252
>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 29
Score = 49.2 bits (118), Expect = 1e-08
Identities = 16/29 (55%), Positives = 18/29 (62%)
Query: 1163 RPYKCPVEYCEKAFSTQYSRKAHIRTHTG 1191
RPY CPVE C++ FS HIR HTG
Sbjct: 1 RPYACPVESCDRRFSRSADLTRHIRIHTG 29
Score = 48.9 bits (117), Expect = 2e-08
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 820 KPYVCGEAGCDKSFASATNYKNHMRIHSG 848
+PY C CD+ F+ + + H+RIH+G
Sbjct: 1 RPYACPVESCDRRFSRSADLTRHIRIHTG 29
Score = 48.1 bits (115), Expect = 3e-08
Identities = 13/28 (46%), Positives = 17/28 (60%)
Query: 1193 KPYRCAHEFCSKSFKTSGDLQKHVRTHT 1220
+PY C E C + F S DL +H+R HT
Sbjct: 1 RPYACPVESCDRRFSRSADLTRHIRIHT 28
Score = 43.5 bits (103), Expect = 1e-06
Identities = 16/29 (55%), Positives = 18/29 (62%)
Query: 790 RPFPCPVLGCDRSFTTSNIRKVHIRTHTG 818
RP+ CPV CDR F+ S HIR HTG
Sbjct: 1 RPYACPVESCDRRFSRSADLTRHIRIHTG 29
Score = 38.1 bits (89), Expect = 1e-04
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 850 KPYVCQVRDCQKRFTEYSSLYKHTLVHS 877
+PY C V C +RF+ + L +H +H+
Sbjct: 1 RPYACPVESCDRRFSRSADLTRHIRIHT 28
Score = 35.8 bits (83), Expect = 7e-04
Identities = 10/26 (38%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
Query: 1138 VCPE--CKKTFSSAHHMKVHLRIHSG 1161
CP C + FS + + H+RIH+G
Sbjct: 4 ACPVESCDRRFSRSADLTRHIRIHTG 29
>d1in4a2 c.37.1.20 (A:17-254) Holliday junction helicase RuvB
{Thermotoga maritima [TaxId: 2336]}
Length = 238
Score = 54.2 bits (129), Expect = 2e-08
Identities = 33/169 (19%), Positives = 62/169 (36%), Gaps = 20/169 (11%)
Query: 354 DDHYGMEDVKKRILEFIAVSQLKGTTQGKILCFYGPPGVGKTSIAKSIARALNREYFRFS 413
D+ G E+VKK++ + ++++G +L GPPG+GKT++A IA L S
Sbjct: 9 DEFIGQENVKKKLSLALEAAKMRGEVLDHVL-LAGPPGLGKTTLAHIIASELQTNIHVTS 67
Query: 414 VGGMSDVAEIKGHRRTYVGAMPGKVIQCMKKTKT-ENPLVLIDEVDKIGKGYSGDPASAL 472
+ ++ + + + + K E L E +I
Sbjct: 68 GPVLVKQGDMAAILTSLERGDVLFIDEIHRLNKAVEELLYSAIEDFQI------------ 115
Query: 473 LEMLDPEQNANFLDHYLDVPVDLSRVLFICTANVIDTIPEPLRDRMEMI 521
M+ +A + +D+ + + PLR R +I
Sbjct: 116 DIMIGKGPSAKSI------RIDIQPFTLVGATTRSGLLSSPLRSRFGII 158
>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on
Saccharomyces cerevisiae sequence}
Length = 29
Score = 48.8 bits (117), Expect = 2e-08
Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Query: 820 KPYVCGEAGCDKSFASATNYKNHMRIHSGEK 850
+ +VC C ++FA + K H R H+ EK
Sbjct: 1 RSFVCEV--CTRAFARQEHLKRHYRSHTNEK 29
Score = 48.0 bits (115), Expect = 4e-08
Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Query: 1163 RPYKCPVEYCEKAFSTQYSRKAHIRTHTGEK 1193
R + C E C +AF+ Q K H R+HT EK
Sbjct: 1 RSFVC--EVCTRAFARQEHLKRHYRSHTNEK 29
Score = 44.2 bits (105), Expect = 1e-06
Identities = 10/30 (33%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Query: 1193 KPYRCAHEFCSKSFKTSGDLQKHVRTHTDE 1222
+ + C E C+++F L++H R+HT+E
Sbjct: 1 RSFVC--EVCTRAFARQEHLKRHYRSHTNE 28
Score = 42.6 bits (101), Expect = 3e-06
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Query: 790 RPFPCPVLGCDRSFTTSNIRKVHIRTHTGEK 820
R F C V C R+F K H R+HT EK
Sbjct: 1 RSFVCEV--CTRAFARQEHLKRHYRSHTNEK 29
Score = 39.5 bits (93), Expect = 3e-05
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 1139 CPECKKTFSSAHHMKVHLRIHSG 1161
C C + F+ H+K H R H+
Sbjct: 5 CEVCTRAFARQEHLKRHYRSHTN 27
Score = 33.4 bits (77), Expect = 0.005
Identities = 8/28 (28%), Positives = 14/28 (50%), Gaps = 2/28 (7%)
Query: 850 KPYVCQVRDCQKRFTEYSSLYKHTLVHS 877
+ +VC+V C + F L +H H+
Sbjct: 1 RSFVCEV--CTRAFARQEHLKRHYRSHT 26
Score = 29.5 bits (67), Expect = 0.13
Identities = 7/24 (29%), Positives = 14/24 (58%)
Query: 880 RPFICDRCPRSYRQLCTLNVHKKT 903
R F+C+ C R++ + L H ++
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRS 24
>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 30
Score = 47.8 bits (114), Expect = 5e-08
Identities = 13/30 (43%), Positives = 19/30 (63%)
Query: 820 KPYVCGEAGCDKSFASATNYKNHMRIHSGE 849
KP+ C GC K F+ N + H+RIH+G+
Sbjct: 1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD 30
Score = 47.8 bits (114), Expect = 5e-08
Identities = 12/30 (40%), Positives = 20/30 (66%)
Query: 1163 RPYKCPVEYCEKAFSTQYSRKAHIRTHTGE 1192
+P++C E C K FS ++ + H+R HTG+
Sbjct: 1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD 30
Score = 47.4 bits (113), Expect = 7e-08
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 1193 KPYRCAHEFCSKSFKTSGDLQKHVRTHTDE 1222
KP++C E C K F +L+ HVR HT +
Sbjct: 1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD 30
Score = 42.4 bits (100), Expect = 4e-06
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 790 RPFPCPVLGCDRSFTTSNIRKVHIRTHTGE 819
+PF C GC + F+ + H+R HTG+
Sbjct: 1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD 30
Score = 36.2 bits (84), Expect = 6e-04
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 850 KPYVCQVRDCQKRFTEYSSLYKHTLVHS 877
KP+ C C KRF+ +L H +H+
Sbjct: 1 KPFQCTFEGCGKRFSLDFNLRTHVRIHT 28
Score = 32.3 bits (74), Expect = 0.012
Identities = 10/26 (38%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
Query: 1138 VCPE--CKKTFSSAHHMKVHLRIHSG 1161
C C K FS +++ H+RIH+G
Sbjct: 4 QCTFEGCGKRFSLDFNLRTHVRIHTG 29
>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 29
Score = 47.3 bits (113), Expect = 6e-08
Identities = 9/31 (29%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
Query: 820 KPYVCGEAGCDKSFASATNYKNHMRIHSGEK 850
K + C E C K F + + H++ H +K
Sbjct: 1 KKFACPE--CPKRFMRSDHLSKHIKTHQNKK 29
Score = 43.9 bits (104), Expect = 1e-06
Identities = 10/31 (32%), Positives = 14/31 (45%), Gaps = 2/31 (6%)
Query: 1163 RPYKCPVEYCEKAFSTQYSRKAHIRTHTGEK 1193
+ + CP C K F HI+TH +K
Sbjct: 1 KKFACPE--CPKRFMRSDHLSKHIKTHQNKK 29
Score = 42.3 bits (100), Expect = 4e-06
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Query: 1193 KPYRCAHEFCSKSFKTSGDLQKHVRTHTDE 1222
K + C C K F S L KH++TH ++
Sbjct: 1 KKFAC--PECPKRFMRSDHLSKHIKTHQNK 28
Score = 39.2 bits (92), Expect = 5e-05
Identities = 11/31 (35%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Query: 790 RPFPCPVLGCDRSFTTSNIRKVHIRTHTGEK 820
+ F CP C + F S+ HI+TH +K
Sbjct: 1 KKFACPE--CPKRFMRSDHLSKHIKTHQNKK 29
Score = 37.7 bits (88), Expect = 2e-04
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 1139 CPECKKTFSSAHHMKVHLRIHSG 1161
CPEC K F + H+ H++ H
Sbjct: 5 CPECPKRFMRSDHLSKHIKTHQN 27
Score = 32.7 bits (75), Expect = 0.009
Identities = 10/28 (35%), Positives = 12/28 (42%), Gaps = 2/28 (7%)
Query: 850 KPYVCQVRDCQKRFTEYSSLYKHTLVHS 877
K + C +C KRF L KH H
Sbjct: 1 KKFACP--ECPKRFMRSDHLSKHIKTHQ 26
Score = 29.2 bits (66), Expect = 0.18
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 880 RPFICDRCPRSYRQLCTLNVHKKT 903
+ F C CP+ + + L+ H KT
Sbjct: 1 KKFACPECPKRFMRSDHLSKHIKT 24
>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 28
Score = 46.5 bits (111), Expect = 1e-07
Identities = 9/30 (30%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Query: 819 EKPYVCGEAGCDKSFASATNYKNHMRIHSG 848
+KP+ C C ++F+ + + H+R H+G
Sbjct: 1 QKPFQCRI--CMRNFSRSDHLTTHIRTHTG 28
Score = 44.9 bits (107), Expect = 5e-07
Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Query: 1192 EKPYRCAHEFCSKSFKTSGDLQKHVRTHT 1220
+KP++C C ++F S L H+RTHT
Sbjct: 1 QKPFQC--RICMRNFSRSDHLTTHIRTHT 27
Score = 41.8 bits (99), Expect = 6e-06
Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Query: 1163 RPYKCPVEYCEKAFSTQYSRKAHIRTHTG 1191
+P++C C + FS HIRTHTG
Sbjct: 2 KPFQC--RICMRNFSRSDHLTTHIRTHTG 28
Score = 39.5 bits (93), Expect = 4e-05
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 1139 CPECKKTFSSAHHMKVHLRIHSG 1161
C C + FS + H+ H+R H+G
Sbjct: 6 CRICMRNFSRSDHLTTHIRTHTG 28
Score = 38.4 bits (90), Expect = 9e-05
Identities = 14/30 (46%), Positives = 20/30 (66%), Gaps = 2/30 (6%)
Query: 789 ERPFPCPVLGCDRSFTTSNIRKVHIRTHTG 818
++PF C + C R+F+ S+ HIRTHTG
Sbjct: 1 QKPFQCRI--CMRNFSRSDHLTTHIRTHTG 28
Score = 36.4 bits (85), Expect = 4e-04
Identities = 8/29 (27%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
Query: 849 EKPYVCQVRDCQKRFTEYSSLYKHTLVHS 877
+KP+ C+ C + F+ L H H+
Sbjct: 1 QKPFQCR--ICMRNFSRSDHLTTHIRTHT 27
Score = 29.9 bits (68), Expect = 0.092
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 880 RPFICDRCPRSYRQLCTLNVHKKT 903
+PF C C R++ + L H +T
Sbjct: 2 KPFQCRICMRNFSRSDHLTTHIRT 25
>d1njfa_ c.37.1.20 (A:) delta prime subunit of DNA polymerase III,
N-domain {Escherichia coli [TaxId: 562]}
Length = 239
Score = 45.5 bits (107), Expect = 1e-05
Identities = 39/188 (20%), Positives = 64/188 (34%), Gaps = 40/188 (21%)
Query: 354 DDHYGMEDVKKRILEFIAVSQLKGTTQGKILCFYGPPGVGKTSIAKSIARALNREYF--- 410
D G E V + +++ ++ F G GVGKTSIA+ +A+ LN E
Sbjct: 12 ADVVGQEHVLTALANGLSLGRI-----HHAYLFSGTRGVGKTSIARLLAKGLNCETGITA 66
Query: 411 ----------RFSVGGMSDVAEIKGHRRTYVGAMPGKVIQCMKKTKTENP--LVLIDEVD 458
G D+ EI RT V ++ ++ + LIDEV
Sbjct: 67 TPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTR-DLLDNVQYAPARGRFKVYLIDEVH 125
Query: 459 KIGKGYSGDPASALLEMLDPEQNANFLDHYLDVPVDLSRVLFICTANVIDTIPEPLRDRM 518
+ + +ALL+ L+ E + V F+ +P + R
Sbjct: 126 MLSRHS----FNALLKTLE-EPPEH--------------VKFLLATTDPQKLPVTILSRC 166
Query: 519 EMIDVSGY 526
+
Sbjct: 167 LQFHLKAL 174
>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 31
Score = 40.7 bits (95), Expect = 1e-05
Identities = 17/31 (54%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 1193 KPYRCAHEFCSKSFKTSGDLQKHV-RTHTDE 1222
KPY C HE CSK+F + D KH RTH++E
Sbjct: 1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSNE 31
Score = 36.4 bits (84), Expect = 6e-04
Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Query: 1163 RPYKCPVEYCEKAFSTQYSRKAHI-RTHTGE 1192
+PY C E C KAFS R H RTH+ E
Sbjct: 1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSNE 31
Score = 34.9 bits (80), Expect = 0.001
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Query: 850 KPYVCQVRDCQKRFTEYSSLYKH-TLVHSD 878
KPY+C+ C K F+ S KH HS+
Sbjct: 1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSN 30
Score = 32.2 bits (73), Expect = 0.015
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 820 KPYVCGEAGCDKSFASATNYKNHM-RIHSGE 849
KPY+C GC K+F++A++ H R HS E
Sbjct: 1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSNE 31
Score = 31.0 bits (70), Expect = 0.035
Identities = 11/31 (35%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 790 RPFPCPVLGCDRSFTTSNIRKVHI-RTHTGE 819
+P+ C GC ++F+ ++ R H RTH+ E
Sbjct: 1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSNE 31
>d1d2na_ c.37.1.20 (A:) Hexamerization domain of
N-ethylmalemide-sensitive fusion (NSF) protein {Chinese
hamster (Cricetulus griseus) [TaxId: 10029]}
Length = 246
Score = 45.7 bits (107), Expect = 2e-05
Identities = 27/181 (14%), Positives = 58/181 (32%), Gaps = 22/181 (12%)
Query: 341 ENLDLTQAAKILDDDHYGMEDVKKRILEFIAVSQLKGTTQGKILCFYGPPGVGKTSIAKS 400
E+ I+ + V + ++ T + GPP GKT++A
Sbjct: 1 EDYASYIMNGIIKWGD-PVTRVLDDGELLVQQTKNSDRTPLVSVLLEGPPHSGKTALAAK 59
Query: 401 IARALNREYFRFS----VGGMSDVAEIKGHRRTYVGAMPGKVIQCMKKTKTENPLVLIDE 456
IA N + + + G S+ A+ + ++ K++ V++D+
Sbjct: 60 IAEESNFPFIKICSPDKMIGFSETAKCQAMKK-----------IFDDAYKSQLSCVVVDD 108
Query: 457 VDKIGKGYSGDPASALLEMLDPEQNANFLDHYLDVPVDLSRVLFICTANVIDTIPEPLRD 516
++++ + L P ++L I T + D + E
Sbjct: 109 IERLL------DYVPIGPRFSNLVLQALLVLLKKAPPQGRKLLIIGTTSRKDVLQEMEML 162
Query: 517 R 517
Sbjct: 163 N 163
>d1iqpa2 c.37.1.20 (A:2-232) Replication factor C {Archaeon
Pyrococcus furiosus [TaxId: 2261]}
Length = 231
Score = 44.9 bits (105), Expect = 2e-05
Identities = 43/215 (20%), Positives = 72/215 (33%), Gaps = 42/215 (19%)
Query: 354 DDHYGMEDVKKRILEFIAVSQLKGTTQGKI--LCFYGPPGVGKTSIAKSIARALNREYFR 411
DD G E + KR+ ++ G + L F GPPGVGKT+ A ++AR L E +R
Sbjct: 24 DDIVGQEHIVKRLKHYVK--------TGSMPHLLFAGPPGVGKTTAALALARELFGENWR 75
Query: 412 FSVGGMSDVAEIKGHRRTYVGAMPGKVIQCMKKTKTENPLVLIDEVDKIGKGYSGDPASA 471
+ E+ + + KV + + I +D+ + D A
Sbjct: 76 H------NFLELNASDERGINVIREKVKEFARTKPIGGASFKIIFLDEA-DALTQDAQQA 128
Query: 472 LLEMLDPEQNANFLDHYLDVPVDLSRVLFICTANVIDTIPEPLRDRMEMIDVSGYVAEEK 531
L ++ + V FI + N I EP++ R + E
Sbjct: 129 LRRTMEMFSS---------------NVRFILSCNYSSKIIEPIQSRCAIFRFRPLRDE-- 171
Query: 532 VAIAAQYLIPQAMKESGLSPEQITLEPSAIQVLIK 566
E + L +Q ++
Sbjct: 172 --------DIAKRLRYIAENEGLELTEEGLQAILY 198
>d1sxja2 c.37.1.20 (A:295-547) Replication factor C1 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 253
Score = 44.8 bits (104), Expect = 3e-05
Identities = 24/195 (12%), Positives = 51/195 (26%), Gaps = 18/195 (9%)
Query: 354 DDHYGMEDVKKRILEFIA-----------VSQLKGTTQGKILCFYGPPGVGKTSIAKSIA 402
G + ++ ++A + G+ + YGPPG+GKT+ A +A
Sbjct: 14 QQVCGNKGSVMKLKNWLANWENSKKNSFKHAGKDGSGVFRAAMLYGPPGIGKTTAAHLVA 73
Query: 403 RALNREYFRFSVGGMSDVAEIKGHRRTYVGAMPGKVIQC---MKKTKTENPLVLIDEVDK 459
+ L + + + + + + M + V+I +
Sbjct: 74 QELGYDILEQNASDVRSKTLLNAGVKNALDNMSVVGYFKHNEEAQNLNGKHFVIIMDEVD 133
Query: 460 IGKGYSGDPASALLEMLDPEQNANFLDHYLDVPVDLSRVLFICTANVIDTIPEPLRDRME 519
G L + L + +C +D
Sbjct: 134 GMSGGDRGGVGQLAQFCRKTSTPLILICNERNLPKMRPFDRVC----LDIQFRRPDANSI 189
Query: 520 MIDVSGYVAEEKVAI 534
+ EK +
Sbjct: 190 KSRLMTIAIREKFKL 204
>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 29
Score = 39.1 bits (91), Expect = 6e-05
Identities = 14/27 (51%), Positives = 18/27 (66%)
Query: 850 KPYVCQVRDCQKRFTEYSSLYKHTLVH 876
KPYVC++ C KR+T+ SSL KH
Sbjct: 1 KPYVCKLPGCTKRYTDPSSLRKHVKTV 27
Score = 33.3 bits (76), Expect = 0.007
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 820 KPYVCGEAGCDKSFASATNYKNHMRIHSG 848
KPYVC GC K + ++ + H++ G
Sbjct: 1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG 29
Score = 31.4 bits (71), Expect = 0.028
Identities = 11/30 (36%), Positives = 20/30 (66%), Gaps = 2/30 (6%)
Query: 790 RPFPCPVLGCDRSFT-TSNIRKVHIRTHTG 818
+P+ C + GC + +T S++RK H++T G
Sbjct: 1 KPYVCKLPGCTKRYTDPSSLRK-HVKTVHG 29
Score = 31.0 bits (70), Expect = 0.044
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 1193 KPYRCAHEFCSKSFKTSGDLQKHVRTH 1219
KPY C C+K + L+KHV+T
Sbjct: 1 KPYVCKLPGCTKRYTDPSSLRKHVKTV 27
Score = 31.0 bits (70), Expect = 0.045
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 1163 RPYKCPVEYCEKAFSTQYSRKAHIRTHTG 1191
+PY C + C K ++ S + H++T G
Sbjct: 1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG 29
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015
{Agrobacterium tumefaciens [TaxId: 358]}
Length = 176
Score = 42.6 bits (99), Expect = 7e-05
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 381 GKILCFYGPPGVGKTSIAKSIARALNREYFRFS 413
G IL G PG GK++IA+++A F
Sbjct: 4 GNILLLSGHPGSGKSTIAEALANLPGVPKVHFH 36
>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 26
Score = 38.3 bits (90), Expect = 8e-05
Identities = 12/28 (42%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
Query: 1193 KPYRCAHEFCSKSFKTSGDLQKHVRTHT 1220
KPY+C C K+F + L H R HT
Sbjct: 1 KPYKCLE--CGKAFSQNSGLINHQRIHT 26
Score = 36.4 bits (85), Expect = 4e-04
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Query: 820 KPYVCGEAGCDKSFASATNYKNHMRIHS 847
KPY C E C K+F+ + NH RIH+
Sbjct: 1 KPYKCLE--CGKAFSQNSGLINHQRIHT 26
Score = 34.9 bits (81), Expect = 0.001
Identities = 13/28 (46%), Positives = 14/28 (50%), Gaps = 2/28 (7%)
Query: 1163 RPYKCPVEYCEKAFSTQYSRKAHIRTHT 1190
+PYKC C KAFS H R HT
Sbjct: 1 KPYKC--LECGKAFSQNSGLINHQRIHT 26
Score = 34.5 bits (80), Expect = 0.002
Identities = 10/22 (45%), Positives = 12/22 (54%)
Query: 1139 CPECKKTFSSAHHMKVHLRIHS 1160
C EC K FS + H RIH+
Sbjct: 5 CLECGKAFSQNSGLINHQRIHT 26
Score = 31.8 bits (73), Expect = 0.017
Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Query: 850 KPYVCQVRDCQKRFTEYSSLYKHTLVHS 877
KPY C +C K F++ S L H +H+
Sbjct: 1 KPYKC--LECGKAFSQNSGLINHQRIHT 26
Score = 27.2 bits (61), Expect = 0.97
Identities = 8/28 (28%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
Query: 790 RPFPCPVLGCDRSFTTSNIRKVHIRTHT 817
+P+ C C ++F+ ++ H R HT
Sbjct: 1 KPYKCLE--CGKAFSQNSGLINHQRIHT 26
Score = 26.4 bits (59), Expect = 1.6
Identities = 6/24 (25%), Positives = 13/24 (54%)
Query: 880 RPFICDRCPRSYRQLCTLNVHKKT 903
+P+ C C +++ Q L H++
Sbjct: 1 KPYKCLECGKAFSQNSGLINHQRI 24
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain
{Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Length = 183
Score = 41.6 bits (96), Expect = 2e-04
Identities = 11/41 (26%), Positives = 19/41 (46%)
Query: 380 QGKILCFYGPPGVGKTSIAKSIARALNREYFRFSVGGMSDV 420
QG + G GK +IA+++ LN++ R + D
Sbjct: 5 QGFTIFLTGYMNSGKDAIARALQVTLNQQGGRSVSLLLGDT 45
>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA
{Xenopus laevis [TaxId: 8355]}
Length = 30
Score = 37.7 bits (87), Expect = 2e-04
Identities = 14/30 (46%), Positives = 19/30 (63%)
Query: 790 RPFPCPVLGCDRSFTTSNIRKVHIRTHTGE 819
+PFPC GC++ FT+ + H THTGE
Sbjct: 1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE 30
Score = 35.0 bits (80), Expect = 0.002
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 1163 RPYKCPVEYCEKAFSTQYSRKAHIRTHTGE 1192
+P+ C E CEK F++ + H THTGE
Sbjct: 1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE 30
Score = 33.5 bits (76), Expect = 0.006
Identities = 13/30 (43%), Positives = 16/30 (53%)
Query: 1193 KPYRCAHEFCSKSFKTSGDLQKHVRTHTDE 1222
KP+ C E C K F + L +H THT E
Sbjct: 1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE 30
Score = 32.3 bits (73), Expect = 0.013
Identities = 13/30 (43%), Positives = 17/30 (56%)
Query: 820 KPYVCGEAGCDKSFASATNYKNHMRIHSGE 849
KP+ C E GC+K F S + H H+GE
Sbjct: 1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE 30
Score = 28.1 bits (62), Expect = 0.45
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 850 KPYVCQVRDCQKRFTEYSSLYKHTLVHS 877
KP+ C+ C+K FT L +H+L H+
Sbjct: 1 KPFPCKEEGCEKGFTSLHHLTRHSLTHT 28
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase
{Streptomyces venezuelae [TaxId: 54571]}
Length = 178
Score = 41.2 bits (95), Expect = 3e-04
Identities = 7/34 (20%), Positives = 14/34 (41%)
Query: 381 GKILCFYGPPGVGKTSIAKSIARALNREYFRFSV 414
+++ G GK+ I + + L + F V
Sbjct: 3 TRMIILNGGSSAGKSGIVRCLQSVLPEPWLAFGV 36
>d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId:
562]}
Length = 205
Score = 41.0 bits (95), Expect = 4e-04
Identities = 9/35 (25%), Positives = 17/35 (48%)
Query: 380 QGKILCFYGPPGVGKTSIAKSIARALNREYFRFSV 414
QG + P G GK+S+ +++ + + SV
Sbjct: 1 QGTLYIVSAPSGAGKSSLIQALLKTQPLYDTQVSV 35
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens),
isoenzyme 6 [TaxId: 9606]}
Length = 173
Score = 40.3 bits (93), Expect = 5e-04
Identities = 25/187 (13%), Positives = 56/187 (29%), Gaps = 28/187 (14%)
Query: 384 LCFYGPPGVGKTSIAKSIARALNREYFRFSVGGMSDVAEIKGHRRTYVGAMPGKVIQCMK 443
+ G PGVGKT++ K +A +Y + D+A + Y ++ +
Sbjct: 7 ILLTGTPGVGKTTLGKELASKSGLKYIN-----VGDLAREEQLYDGYDEEYDCPILDEDR 61
Query: 444 KTKTENPLVLIDEVDKIGKGYSGDPASALLEMLDPEQNANFLDHYLDVPVD--LSRVLFI 501
++DE+D + + + + L + R+
Sbjct: 62 ---------VVDELDNQMREGGVIVDYHGCDFF--PERWFHIVFVLRTDTNVLYERLET- 109
Query: 502 CTANVIDTIPEPLRDRMEMIDVSGYVAEEKVAIAAQYLIPQAMKESGLSPEQITLEPSAI 561
+ L D ++ E + + + + PE++ I
Sbjct: 110 -----RGYNEKKLTDNIQCEIFQVLYEEATASYKEEIVH----QLPSNKPEELENNVDQI 160
Query: 562 QVLIKNY 568
I+ +
Sbjct: 161 LKWIEQW 167
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli
[TaxId: 562]}
Length = 169
Score = 40.1 bits (92), Expect = 5e-04
Identities = 19/166 (11%), Positives = 39/166 (23%), Gaps = 8/166 (4%)
Query: 382 KILCFYGPPGVGKTSIAKSIARALNREYFRFSVGGMSDVAEIKGHRRTYVGAMPGKVIQC 441
+ + GP G GK++I + +A+ LN E++ G G + +
Sbjct: 3 RNIFLVGPMGAGKSTIGRQLAQQLNMEFYDSDQEIEKRTGADVGWVFDLEGEEGFRDREE 62
Query: 442 MKKTKTENPLVLIDEVDKIGKGYSGDPASALLEMLDPEQNANFLDHYLDVPVDLSRVLFI 501
+ ++ + D R L
Sbjct: 63 KVINELTEKQGIVLATGGGSVKSRETRNRLSARGVVVYLETTIEKQLARTQRDKKRPLLH 122
Query: 502 CTANVIDTIPEPLRDRMEM--------IDVSGYVAEEKVAIAAQYL 539
+ + +R + I A+ L
Sbjct: 123 VETPPREVLEALANERNPLYEEIADVTIRTDDQSAKVVANQIIHML 168
>d2awna2 c.37.1.12 (A:4-235) Maltose transport protein MalK,
N-terminal domain {Escherichia coli [TaxId: 562]}
Length = 232
Score = 40.7 bits (95), Expect = 6e-04
Identities = 27/140 (19%), Positives = 50/140 (35%), Gaps = 12/140 (8%)
Query: 359 MEDVKKRILEFIAVSQLKGT-TQGKILCFYGPPGVGKTSIAKSIARALNREYFRFSVGGM 417
+++V K E + + +G+ + F GP G GK+++ + IA +G
Sbjct: 3 LQNVTKAWGEVVVSKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLETITSGDLFIGEK 62
Query: 418 SDVAEIKGHRRTYVGAMPGKVIQCMKKTKTENPLVLIDEVDKIGKGYSGDPASALLEMLD 477
+ + VG + + EN + ++ K + + E+L
Sbjct: 63 -RMNDTP-PAERGVGMVFQSYALYPHLSVAEN-MSFGLKLAGAKKEVINQRVNQVAEVL- 118
Query: 478 PEQNANFLDHYLDV-PVDLS 496
L H LD P LS
Sbjct: 119 ------QLAHLLDRKPKALS 132
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus
acidocaldarius [TaxId: 2285]}
Length = 194
Score = 40.0 bits (92), Expect = 6e-04
Identities = 24/193 (12%), Positives = 45/193 (23%), Gaps = 23/193 (11%)
Query: 382 KILCFYGPPGVGKTSIAKSIARALNREYFRFSVGGMSDVAEIKGHRRTYV---------- 431
KI G PGVGK+++ + L+ + + D + Y
Sbjct: 2 KIGIVTGIPGVGKSTVLAKVKEILDNQGINNKIINYGDFMLATALKLGYAKDRDEMRKLS 61
Query: 432 ----GAMPGKVIQCMKKTKTENPLVLIDEVDKIGKGYSGDPASALLEMLDPEQNANFLDH 487
+ + + + + P+ L +
Sbjct: 62 VEKQKKLQIDAAKGIAEEARAG---GEGYLFIDTHAVIRTPSGYLPGLPSYVITEINPSV 118
Query: 488 YLDVPVDLSRVLFICTANVIDTIPEPLRDRMEMIDVSGYVAEEKVAIAAQYLIPQAMK-- 545
+ D I + DT E + + A A+ L +K
Sbjct: 119 IFLLEAD---PKIILSRQKRDTTRNRNDYSDESVILETINFARYAATASAVLAGSTVKVI 175
Query: 546 -ESGLSPEQITLE 557
P E
Sbjct: 176 VNVEGDPSIAANE 188
>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 33
Score = 35.5 bits (82), Expect = 0.001
Identities = 12/33 (36%), Positives = 16/33 (48%), Gaps = 3/33 (9%)
Query: 820 KPYVCGEAGC---DKSFASATNYKNHMRIHSGE 849
K +VC GC + F + HMR H+GE
Sbjct: 1 KEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGE 33
Score = 32.8 bits (75), Expect = 0.009
Identities = 11/31 (35%), Positives = 14/31 (45%), Gaps = 3/31 (9%)
Query: 1165 YKCPVEYC---EKAFSTQYSRKAHIRTHTGE 1192
+ C C + F QY H+R HTGE
Sbjct: 3 FVCHWGGCSRELRPFKAQYMLVVHMRRHTGE 33
Score = 28.5 bits (64), Expect = 0.28
Identities = 12/31 (38%), Positives = 14/31 (45%), Gaps = 3/31 (9%)
Query: 792 FPCPVLGCDRSFTTSNIR---KVHIRTHTGE 819
F C GC R + VH+R HTGE
Sbjct: 3 FVCHWGGCSRELRPFKAQYMLVVHMRRHTGE 33
Score = 28.1 bits (63), Expect = 0.41
Identities = 12/33 (36%), Positives = 15/33 (45%), Gaps = 3/33 (9%)
Query: 1193 KPYRCAHEFCS---KSFKTSGDLQKHVRTHTDE 1222
K + C CS + FK L H+R HT E
Sbjct: 1 KEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGE 33
Score = 26.6 bits (59), Expect = 1.5
Identities = 7/23 (30%), Positives = 13/23 (56%)
Query: 1139 CPECKKTFSSAHHMKVHLRIHSG 1161
C + F + + + VH+R H+G
Sbjct: 10 CSRELRPFKAQYMLVVHMRRHTG 32
>d1sxjd2 c.37.1.20 (D:26-262) Replication factor C2 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 237
Score = 39.3 bits (90), Expect = 0.001
Identities = 22/120 (18%), Positives = 42/120 (35%), Gaps = 18/120 (15%)
Query: 354 DDHYGMEDVKKRILEFIAVSQLKGTTQGKI--LCFYGPPGVGKTSIAKSIARALNREYFR 411
D+ + + + + + + FYGPPG GKTS ++ + L
Sbjct: 12 DEVTAQDHAVTVLKKTLK--------SANLPHMLFYGPPGTGKTSTILALTKELYGPDLM 63
Query: 412 FSVGGMSDVAEIKGHR--RTYVGAMPGKVIQCMKKTKTENP------LVLIDEVDKIGKG 463
S + ++ +G R V + K EN ++++DE D +
Sbjct: 64 KSRILELNASDERGISIVREKVKNFARLTVSKPSKHDLENYPCPPYKIIILDEADSMTAD 123
>d1sxje2 c.37.1.20 (E:4-255) Replication factor C5 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 252
Score = 39.4 bits (90), Expect = 0.002
Identities = 12/106 (11%), Positives = 29/106 (27%), Gaps = 5/106 (4%)
Query: 354 DDHYGMEDVKKRILEFIAVSQLKGTTQGKILCFYGPPGVGKTSIAKSIARALNREYFRFS 413
+ E++ + + L YGP G GK + ++ ++
Sbjct: 11 NALSHNEELTNFLKSLSDQPRD-----LPHLLLYGPNGTGKKTRCMALLESIFGPGVYRL 65
Query: 414 VGGMSDVAEIKGHRRTYVGAMPGKVIQCMKKTKTENPLVLIDEVDK 459
+ + ++ N ++I E+ K
Sbjct: 66 KIDVRQFVTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLK 111
>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA
{Xenopus laevis [TaxId: 8355]}
Length = 29
Score = 35.1 bits (80), Expect = 0.002
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 819 EKPYVCGEAGCDKSFASATNYKNHMRIHS 847
+ PY C GCDK F+ + K H ++H+
Sbjct: 1 QLPYECPHEGCDKRFSLPSRLKRHEKVHA 29
Score = 34.3 bits (78), Expect = 0.003
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 1192 EKPYRCAHEFCSKSFKTSGDLQKHVRTH 1219
+ PY C HE C K F L++H + H
Sbjct: 1 QLPYECPHEGCDKRFSLPSRLKRHEKVH 28
Score = 30.8 bits (69), Expect = 0.049
Identities = 12/26 (46%), Positives = 15/26 (57%)
Query: 1164 PYKCPVEYCEKAFSTQYSRKAHIRTH 1189
PY+CP E C+K FS K H + H
Sbjct: 3 PYECPHEGCDKRFSLPSRLKRHEKVH 28
Score = 28.9 bits (64), Expect = 0.20
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 789 ERPFPCPVLGCDRSFTTSNIRKVHIRTH 816
+ P+ CP GCD+ F+ + K H + H
Sbjct: 1 QLPYECPHEGCDKRFSLPSRLKRHEKVH 28
Score = 27.4 bits (60), Expect = 0.77
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 849 EKPYVCQVRDCQKRFTEYSSLYKHTLVHS 877
+ PY C C KRF+ S L +H VH+
Sbjct: 1 QLPYECPHEGCDKRFSLPSRLKRHEKVHA 29
>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 189
Score = 38.5 bits (88), Expect = 0.002
Identities = 18/111 (16%), Positives = 30/111 (27%), Gaps = 2/111 (1%)
Query: 382 KILCFYGPPGVGKTSIAKSIARALNREYFRFSVGGMSDVAEIKGHRRTYVGAMPGKVIQC 441
+ + GPPGVGKT++ + L +V + V + G
Sbjct: 2 RHVFLTGPPGVGKTTLIHKASEVLKSSGVPVDGFYTEEVRQGGRRIGFDVVTLSGTRGPL 61
Query: 442 MKKTKTENPLVLIDEV--DKIGKGYSGDPASALLEMLDPEQNANFLDHYLD 490
+ P V + A +L D +D
Sbjct: 62 SRVGLEPPPGKRECRVGQYVVDLTSFEQLALPVLRNADCSSGPGQRVCVID 112
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus
halodurans [TaxId: 86665]}
Length = 176
Score = 38.5 bits (88), Expect = 0.002
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 382 KILCFYGPPGVGKTSIAKSIARALNREYF 410
K+ GP GVGK++ K +A L+ +
Sbjct: 3 KLYIITGPAGVGKSTTCKRLAAQLDNSAY 31
>d2cdna1 c.37.1.1 (A:1-181) Adenylate kinase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 181
Score = 38.3 bits (88), Expect = 0.002
Identities = 18/140 (12%), Positives = 44/140 (31%), Gaps = 5/140 (3%)
Query: 384 LCFYGPPGVGKTSIAKSIARALNREYFRFSVGGMSDVAEIKGHRRTYVGAMPGKVIQCMK 443
+ GPPG GK + A +A L + S G ++ T +G + +
Sbjct: 3 VLLLGPPGAGKGTQAVKLAEKLG--IPQISTG---ELFRRNIEEGTKLGVEAKRYLDAGD 57
Query: 444 KTKTENPLVLIDEVDKIGKGYSGDPASALLEMLDPEQNANFLDHYLDVPVDLSRVLFICT 503
++ L+D+ +G ++ + + + +D +
Sbjct: 58 LVPSDLTNELVDDRLNNPDAANGFILDGYPRSVEQAKALHEMLERRGTDIDAVLEFRVSE 117
Query: 504 ANVIDTIPEPLRDRMEMIDV 523
+++ + R +
Sbjct: 118 EVLLERLKGRGRADDTDDVI 137
>d1v43a3 c.37.1.12 (A:7-245) Hypothetical protein PH0022, N-terminal
domain {Pyrococcus horikoshii [TaxId: 53953]}
Length = 239
Score = 38.6 bits (90), Expect = 0.002
Identities = 36/138 (26%), Positives = 51/138 (36%), Gaps = 10/138 (7%)
Query: 360 EDVKKRILEFIAVSQLKGT-TQGKILCFYGPPGVGKTSIAKSIARALNREYFRFSVGGMS 418
E++ KR F AV++L T G+ L GP G GKT+ + IA R G
Sbjct: 10 ENLTKRFGNFTAVNKLNLTIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTEGRIYFGDR- 68
Query: 419 DVAEIKGHRRTYVGAMPGKVIQCMKKTKTENPLVLIDEVDKIGKGYSGDPASALLEMLDP 478
DV + R + + T EN + ++ K K E+L
Sbjct: 69 DVTYLPPKDR-NISMVFQSYAVWPHMTVYEN-IAFPLKIKKFPKDEIDKRVRWAAELLQI 126
Query: 479 EQNANFLDHYLDVPVDLS 496
E L+ Y P LS
Sbjct: 127 E---ELLNRY---PAQLS 138
>d1g8pa_ c.37.1.20 (A:) ATPase subunit of magnesium chelatase, BchI
{Rhodobacter capsulatus [TaxId: 1061]}
Length = 333
Score = 38.8 bits (89), Expect = 0.003
Identities = 12/49 (24%), Positives = 22/49 (44%), Gaps = 6/49 (12%)
Query: 357 YGMEDVKKRILEFIAVSQLKGTTQGKILCFYGPPGVGKTSIAKSIARAL 405
G ED+K +L + G + +G G GK++ +++A L
Sbjct: 10 VGQEDMKLALLLTAVDPGIGG------VLVFGDRGTGKSTAVRALAALL 52
>d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens) [TaxId:
9606]}
Length = 194
Score = 37.6 bits (86), Expect = 0.004
Identities = 25/149 (16%), Positives = 46/149 (30%), Gaps = 11/149 (7%)
Query: 382 KILCFYGPPGVGKTSIAKSIARALNREYFRFSVGGMSDVAEIKGHRRTYVGAMPGKVIQC 441
++ G PG GK + I Y S G + ++ R+ + +
Sbjct: 2 LVVFVLGGPGAGKGTQCARIVEKYG--YTHLSAGEL-----LRDERKNPDSQYGELIEKY 54
Query: 442 MKKTKTENPLVLIDEVDKIGKGYSGDPASALLEMLD----PEQNANFLDHYLDVPVDLSR 497
+K+ K + I + + A ++D + N + +D D+S
Sbjct: 55 IKEGKIVPVEITISLLKREMDQTMAANAQKNKFLIDGFPRNQDNLQGWNKTMDGKADVSF 114
Query: 498 VLFICTANVIDTIPEPLRDRMEMIDVSGY 526
VLF N I R +
Sbjct: 115 VLFFDCNNEICIERCLERGKSSGRSDDNR 143
>d1um8a_ c.37.1.20 (A:) ClpX {Helicobacter pylori [TaxId: 210]}
Length = 364
Score = 38.3 bits (88), Expect = 0.005
Identities = 53/301 (17%), Positives = 104/301 (34%), Gaps = 71/301 (23%)
Query: 370 IAVSQLKGTTQGKILCFYGPPGVGKTSIAKSIARALNREYFRF---SVGGMSDVAEIKGH 426
+ + ++ IL GP G GKT +A+++A+ L+ S+ V E +
Sbjct: 58 LEHLEEVELSKSNIL-LIGPTGSGKTLMAQTLAKHLDIPIAISDATSLTEAGYVGEDVEN 116
Query: 427 RRTYVGAMPGKVIQCMKKTKTENPLVLIDEVDKIGK-----GYSGDPA-----SALLEML 476
T + +Q K + +V IDE+DKI + + D + ALL+++
Sbjct: 117 ILTRLLQASDWNVQ-----KAQKGIVFIDEIDKISRLSENRSITRDVSGEGVQQALLKIV 171
Query: 477 D------PEQNANFLDHYLDVPVDLSRVLFICTANV--IDTIPEPLRDRMEMIDVSGYVA 528
+ P + + +D S +LFIC + I + + + ++
Sbjct: 172 EGSLVNIPPKGGRKHPEGNFIQIDTSDILFICAGAFDGLAEIIKKRTTQNVLGFTQEKMS 231
Query: 529 EEKVAIAAQYLIPQAMKESGLSPE------------------------------------ 552
+++ + + GL PE
Sbjct: 232 KKEQEAILHLVQTHDLVTYGLIPELIGRLPVLSTLDSISLEAMVDILQKPKNALIKQYQQ 291
Query: 553 -------QITLEPSAIQVLIKN-YCRESGVRNLQKHIEKVTRKVALTIVKKESDKVTVTN 604
+ E AI+ + + R++G R L+ IE + + K + +V +T
Sbjct: 292 LFKMDEVDLIFEEEAIKEIAQLALERKTGARGLRAIIEDFCLDIMFDLPKLKGSEVRITK 351
Query: 605 D 605
D
Sbjct: 352 D 352
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus
voltae [TaxId: 2188]}
Length = 190
Score = 37.3 bits (85), Expect = 0.005
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 382 KILCFYGPPGVGKTSIAKSIARALNREYFRFSV 414
K++ G PGVG T+ ++ L +E + +
Sbjct: 2 KVVVVTGVPGVGSTTSSQLAMDNLRKEGVNYKM 34
>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 27
Score = 33.5 bits (76), Expect = 0.005
Identities = 12/25 (48%), Positives = 17/25 (68%)
Query: 1139 CPECKKTFSSAHHMKVHLRIHSGIR 1163
CP C K F S +++KVH R H+G +
Sbjct: 3 CPTCHKKFLSKYYLKVHNRKHTGEK 27
Score = 31.6 bits (71), Expect = 0.021
Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Query: 1166 KCPVEYCEKAFSTQYSRKAHIRTHTGEK 1193
+CP C K F ++Y K H R HTGEK
Sbjct: 2 ECPT--CHKKFLSKYYLKVHNRKHTGEK 27
Score = 30.0 bits (67), Expect = 0.088
Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
Query: 794 CPVLGCDRSFTTSNIRKVHIRTHTGEK 820
CP C + F + KVH R HTGEK
Sbjct: 3 CPT--CHKKFLSKYYLKVHNRKHTGEK 27
Score = 26.2 bits (57), Expect = 1.8
Identities = 11/22 (50%), Positives = 12/22 (54%)
Query: 829 CDKSFASATNYKNHMRIHSGEK 850
C K F S K H R H+GEK
Sbjct: 6 CHKKFLSKYYLKVHNRKHTGEK 27
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS
kinase) {Human (Homo sapiens) [TaxId: 9606]}
Length = 195
Score = 37.4 bits (85), Expect = 0.006
Identities = 7/33 (21%), Positives = 14/33 (42%)
Query: 380 QGKILCFYGPPGVGKTSIAKSIARALNREYFRF 412
+G + G G GKT+++ ++ L
Sbjct: 18 RGCTVWLTGLSGAGKTTVSMALEEYLVCHGIPC 50
>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 26
Score = 33.5 bits (76), Expect = 0.006
Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Query: 1164 PYKCPVEYCEKAFSTQYSRKAHIRTHTG 1191
P+KC V C K FS + K H+R HTG
Sbjct: 1 PHKCEV--CGKCFSRKDKLKTHMRCHTG 26
Score = 28.9 bits (64), Expect = 0.19
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 1139 CPECKKTFSSAHHMKVHLRIHSG 1161
C C K FS +K H+R H+G
Sbjct: 4 CEVCGKCFSRKDKLKTHMRCHTG 26
Score = 28.5 bits (63), Expect = 0.27
Identities = 11/28 (39%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
Query: 791 PFPCPVLGCDRSFTTSNIRKVHIRTHTG 818
P C V C + F+ + K H+R HTG
Sbjct: 1 PHKCEV--CGKCFSRKDKLKTHMRCHTG 26
Score = 28.5 bits (63), Expect = 0.33
Identities = 11/27 (40%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
Query: 1194 PYRCAHEFCSKSFKTSGDLQKHVRTHT 1220
P++C E C K F L+ H+R HT
Sbjct: 1 PHKC--EVCGKCFSRKDKLKTHMRCHT 25
Score = 27.0 bits (59), Expect = 1.2
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 829 CDKSFASATNYKNHMRIHSG 848
C K F+ K HMR H+G
Sbjct: 7 CGKCFSRKDKLKTHMRCHTG 26
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId:
562]}
Length = 171
Score = 36.5 bits (83), Expect = 0.007
Identities = 8/31 (25%), Positives = 14/31 (45%)
Query: 380 QGKILCFYGPPGVGKTSIAKSIARALNREYF 410
I G G GK+++A +A L+ +
Sbjct: 5 DHHIYVLMGVSGSGKSAVASEVAHQLHAAFL 35
>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi
[TaxId: 556]}
Length = 170
Score = 36.5 bits (83), Expect = 0.007
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 382 KILCFYGPPGVGKTSIAKSIARALNREYF 410
+ + G G G T++ + +ARAL E+
Sbjct: 3 EPIFMVGARGCGMTTVGRELARALGYEFV 31
>d2gnoa2 c.37.1.20 (A:11-208) gamma subunit of DNA polymerase III,
N-domain {Thermotoga maritima [TaxId: 2336]}
Length = 198
Score = 36.6 bits (84), Expect = 0.008
Identities = 6/41 (14%), Positives = 13/41 (31%), Gaps = 5/41 (12%)
Query: 384 LCFYGPPGVGKTSIAKSIARALNREYFRFSVGGMSDVAEIK 424
+ G ++ + + + + SDV EI
Sbjct: 18 ILINGEDLSYPREVSLELPEYVEKFPPKA-----SDVLEID 53
>d1sgwa_ c.37.1.12 (A:) Putative ABC transporter PF0895 {Pyrococcus
furiosus [TaxId: 2261]}
Length = 200
Score = 36.8 bits (85), Expect = 0.008
Identities = 23/120 (19%), Positives = 46/120 (38%), Gaps = 5/120 (4%)
Query: 380 QGKILCFYGPPGVGKTSIAKSIARALNREYFRFSVGGMSDVAEIKGHRRTYVGAMPGKVI 439
+G ++ F+GP G+GKT++ K+I+ L G+ + + +P ++I
Sbjct: 26 KGNVVNFHGPNGIGKTTLLKTISTYLKPLKGEIIYNGVPIT-----KVKGKIFFLPEEII 80
Query: 440 QCMKKTKTENPLVLIDEVDKIGKGYSGDPASALLEMLDPEQNANFLDHYLDVPVDLSRVL 499
K + + + A +E+LD ++ L V L+ L
Sbjct: 81 VPRKISVEDYLKAVASLYGVKVNKNEIMDALESVEVLDLKKKLGELSQGTIRRVQLASTL 140
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR,
ribosylnicotinamide kinase domain {Haemophilus
influenzae [TaxId: 727]}
Length = 192
Score = 36.6 bits (83), Expect = 0.009
Identities = 18/171 (10%), Positives = 43/171 (25%), Gaps = 13/171 (7%)
Query: 382 KILCFYGPPGVGKTSIAKSIARALN--------REYFRFSVGGMSDVAEIKGHRRTYVGA 433
K + G GK+ + +A N RE+ +GG + + + +G
Sbjct: 8 KTVAILGGESSGKSVLVNKLAAVFNTTSAWEYGREFVFEKLGGDEQAMQYSDYPQMALGH 67
Query: 434 MPGKVIQCMKKTKTENPLVLIDEVDKIGKGYSGDPASALLEMLDPEQNANFLDHYLDVPV 493
K Y G L M+ + +
Sbjct: 68 QRYIDYAVRHSHKIAFIDTDFITTQAFCIQYEGKAHPFLDSMIKEYPFDVTILLKNNTEW 127
Query: 494 DLSRVLFICTANVIDTIPEPLRDRME-----MIDVSGYVAEEKVAIAAQYL 539
+ + + + L+ ++ I++ ++ +
Sbjct: 128 VDDGLRSLGSQKQRQQFQQLLKKLLDKYKVPYIEIESPSYLDRYNQVKAVI 178
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus
thermophilus [TaxId: 274]}
Length = 387
Score = 37.3 bits (86), Expect = 0.010
Identities = 21/103 (20%), Positives = 40/103 (38%), Gaps = 19/103 (18%)
Query: 388 GPPGVGKTSIAKSIARAL----------NREYFRFSVGGMSDVAEIKGHRRTYVGAMPGK 437
G PGVGKT+I + +A+ + + +G + + G + Y G +
Sbjct: 50 GEPGVGKTAIVEGLAQRIVKGDVPEGLKGKRIVSLQMGSL-----LAGAK--YRGEFEER 102
Query: 438 VIQCMKKTKTENPLVL--IDEVDKIGKGYSGDPASALLEMLDP 478
+ +++ V+ IDE+ + + A ML P
Sbjct: 103 LKAVIQEVVQSQGEVILFIDELHTVVGAGKAEGAVDAGNMLKP 145
>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2
{Human (Homo sapiens) [TaxId: 9606]}
Length = 38
Score = 32.9 bits (75), Expect = 0.010
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 787 TSERPFPCPVLGCDRSFTTSNIRKVHIRTHT 817
+ ++PF C GC + FT + VH H
Sbjct: 2 SDDKPFLCTAPGCGQRFTNEDHLAVHKHKHE 32
Score = 30.6 bits (69), Expect = 0.071
Identities = 8/28 (28%), Positives = 16/28 (57%), Gaps = 4/28 (14%)
Query: 819 EKPYVCGEAGCDKSFASATNYKNHMRIH 846
+KP++C GC + F + +H+ +H
Sbjct: 4 DKPFLCTAPGCGQRFTNE----DHLAVH 27
Score = 26.4 bits (58), Expect = 2.2
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 849 EKPYVCQVRDCQKRFTEYSSLYKHTLVH 876
+KP++C C +RFT L H H
Sbjct: 4 DKPFLCTAPGCGQRFTNEDHLAVHKHKH 31
Score = 26.4 bits (58), Expect = 2.4
Identities = 8/29 (27%), Positives = 11/29 (37%)
Query: 1192 EKPYRCAHEFCSKSFKTSGDLQKHVRTHT 1220
+KP+ C C + F L H H
Sbjct: 4 DKPFLCTAPGCGQRFTNEDHLAVHKHKHE 32
>d1ny5a2 c.37.1.20 (A:138-384) Transcriptional activator sigm54
(NtrC1), C-terminal domain {Aquifex aeolicus [TaxId:
63363]}
Length = 247
Score = 36.8 bits (85), Expect = 0.010
Identities = 44/225 (19%), Positives = 84/225 (37%), Gaps = 55/225 (24%)
Query: 387 YGPPGVGKTSIAKSIARALNREYFRFSVGGMSDV------AEIKGHRR-TYVGAM---PG 436
G GVGK +A+ I + +R F ++ + AE+ G+ + + GA+ G
Sbjct: 29 TGESGVGKEVVARLIHKLSDRSKEPFVALNVASIPRDIFEAELFGYEKGAFTGAVSSKEG 88
Query: 437 KVIQCMKKTKTENPLVLIDEVDKIGKGYSGDPASALLEMLDPEQNANFLDHYLDVPVDLS 496
T + +DE+ ++ S + + LL +++ L ++ V++
Sbjct: 89 FFELADGGT------LFLDEIGEL----SLEAQAKLLRVIE-SGKFYRLGGRKEIEVNV- 136
Query: 497 RVLFICTANVIDTIPE-------------------PLRDRMEMIDVSGYVAEEKVAIAAQ 537
R+L N+ + + E PLR+R E I
Sbjct: 137 RILAATNRNIKELVKEGKFREDLYYRLGVIEIEIPPLRERKEDIIPLAN----------- 185
Query: 538 YLIPQAMKESGLSPEQITLEPSAIQVLIKNYCRESGVRNLQKHIE 582
+ + + ++ E T SA ++L +Y VR L+ IE
Sbjct: 186 HFLKKFSRKYAKEVEGFT--KSAQELL-LSYPWYGNVRELKNVIE 227
>d1tuea_ c.37.1.20 (A:) Replication protein E1 helicase domain
{Human papillomavirus type 18 [TaxId: 333761]}
Length = 205
Score = 36.3 bits (84), Expect = 0.011
Identities = 11/32 (34%), Positives = 14/32 (43%)
Query: 375 LKGTTQGKILCFYGPPGVGKTSIAKSIARALN 406
LKGT + L F GP GK+ S +
Sbjct: 47 LKGTPKKNCLVFCGPANTGKSYFGMSFIHFIQ 78
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 165
Score = 35.7 bits (81), Expect = 0.014
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 388 GPPGVGKTSIAKSIARALNREYF 410
G PG GK++I + +A+AL
Sbjct: 8 GLPGSGKSTIGRRLAKALGVGLL 30
>d3adka_ c.37.1.1 (A:) Adenylate kinase {Pig (Sus scrofa) [TaxId:
9823]}
Length = 194
Score = 36.1 bits (82), Expect = 0.015
Identities = 14/121 (11%), Positives = 32/121 (26%), Gaps = 6/121 (4%)
Query: 380 QGKILCFYGPPGVGKTSIAKSIARALNREYFRFSVGGMSDVAEIKGHRRTYVGAM----- 434
+ KI+ G PG GK + + I + + ++V+ + M
Sbjct: 7 KSKIIFVVGGPGSGKGTQCEKIVQKYGYTHLSTGDLLRAEVSSGSARGKMLSEIMEKGQL 66
Query: 435 -PGKVIQCMKKTKTENPLVLIDEVDKIGKGYSGDPASALLEMLDPEQNANFLDHYLDVPV 493
P + + M + + G + ++D +
Sbjct: 67 VPLETVLDMLRDAMVAKVDTSKGFLIDGYPREVKQGEEFERKIGQPTLLLYVDAGPETMT 126
Query: 494 D 494
Sbjct: 127 K 127
>d1a5ta2 c.37.1.20 (A:1-207) delta prime subunit of DNA polymerase
III, N-domain {Escherichia coli [TaxId: 562]}
Length = 207
Score = 35.9 bits (81), Expect = 0.016
Identities = 8/77 (10%), Positives = 21/77 (27%), Gaps = 3/77 (3%)
Query: 380 QGKI---LCFYGPPGVGKTSIAKSIARALNREYFRFSVGGMSDVAEIKGHRRTYVGAMPG 436
G+ L PG+G ++ +++R L + + T+
Sbjct: 20 AGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTL 79
Query: 437 KVIQCMKKTKTENPLVL 453
+ + +
Sbjct: 80 APEKGKNTLGVDAVREV 96
>d1ckea_ c.37.1.1 (A:) CMP kinase {Escherichia coli [TaxId: 562]}
Length = 225
Score = 36.2 bits (82), Expect = 0.016
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 383 ILCFYGPPGVGKTSIAKSIARALNREYF 410
++ GP G GK ++ K++A AL
Sbjct: 5 VITIDGPSGAGKGTLCKAMAEALQWHLL 32
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni
[TaxId: 197]}
Length = 161
Score = 35.3 bits (80), Expect = 0.018
Identities = 9/29 (31%), Positives = 19/29 (65%)
Query: 382 KILCFYGPPGVGKTSIAKSIARALNREYF 410
K + F G G GK+++A+++A+ L+ +
Sbjct: 1 KNIVFIGFMGSGKSTLARALAKDLDLVFL 29
>d1u0ja_ c.37.1.20 (A:) Rep 40 protein helicase domain
{Adeno-associated virus 2, AAV2 [TaxId: 10804]}
Length = 267
Score = 36.1 bits (83), Expect = 0.018
Identities = 19/100 (19%), Positives = 34/100 (34%), Gaps = 8/100 (8%)
Query: 328 DWLTSLPWGIQSEENLDLTQAAKILDDDHYGMEDVKKRILEFIAVSQLKGTTQGKILCFY 387
D+L G Q E++ + KIL+ + Y + K + + +
Sbjct: 59 DYLV----GQQPVEDISSNRIYKILELNGYDPQYA----ASVFLGWATKKFGKRNTIWLF 110
Query: 388 GPPGVGKTSIAKSIARALNREYFRFSVGGMSDVAEIKGHR 427
GP GKT+IA++IA + +
Sbjct: 111 GPATTGKTNIAEAIAHTVPFYGCVNWTNENFPFNDCVDKM 150
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein
Aq_1292 {Aquifex aeolicus [TaxId: 63363]}
Length = 178
Score = 35.4 bits (80), Expect = 0.023
Identities = 13/43 (30%), Positives = 17/43 (39%)
Query: 388 GPPGVGKTSIAKSIARALNREYFRFSVGGMSDVAEIKGHRRTY 430
G PGVGKT++ K I L + F + D K
Sbjct: 7 GEPGVGKTTLVKKIVERLGKRAIGFWTEEVRDPETKKRTGFRI 49
>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 28
Score = 31.7 bits (72), Expect = 0.023
Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Query: 789 ERPFPCPVLGCDRSFTTSNIRKVHIRTH 816
E+PF C + C R F S+ RK H + H
Sbjct: 1 EKPFACDI--CGRKFARSDERKRHTKIH 26
Score = 31.3 bits (71), Expect = 0.032
Identities = 9/28 (32%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Query: 1192 EKPYRCAHEFCSKSFKTSGDLQKHVRTH 1219
EKP+ C + C + F S + ++H + H
Sbjct: 1 EKPFAC--DICGRKFARSDERKRHTKIH 26
Score = 29.4 bits (66), Expect = 0.15
Identities = 11/28 (39%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
Query: 819 EKPYVCGEAGCDKSFASATNYKNHMRIH 846
EKP+ C C + FA + K H +IH
Sbjct: 1 EKPFACDI--CGRKFARSDERKRHTKIH 26
Score = 27.5 bits (61), Expect = 0.61
Identities = 8/27 (29%), Positives = 14/27 (51%), Gaps = 2/27 (7%)
Query: 1163 RPYKCPVEYCEKAFSTQYSRKAHIRTH 1189
+P+ C + C + F+ RK H + H
Sbjct: 2 KPFAC--DICGRKFARSDERKRHTKIH 26
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major
[TaxId: 5664]}
Length = 174
Score = 35.0 bits (79), Expect = 0.024
Identities = 24/192 (12%), Positives = 53/192 (27%), Gaps = 25/192 (13%)
Query: 380 QGKILCFYGPPGVGKTSIAKSIARALNREYFRFSVGGMSDVAEIKGHRRTYVGAMPGKVI 439
+G + G PG GKTS+A+ IA L+ +V ++ Y
Sbjct: 4 KGINILITGTPGTGKTSMAEMIAAELDGFQH-------LEVGKLVKENHFYTEYDTELDT 56
Query: 440 QCMKKTKTENPLVLIDEVDKIGKGYSGDPASALLEMLDPEQNANFLDHYLDVPVDLSRVL 499
+++ + L ++ + + D ++ V +
Sbjct: 57 HIIEEKDEDRLLDFMEPIMVSRGNHVVD-----------YHSSELFPERWFHMVVVLHTS 105
Query: 500 FICTANVI---DTIPEPLRDRMEMIDVSGYVAEEKVAIAAQYLIPQAMKESGLSPEQITL 556
+ + ME E + A ++ + EQ+
Sbjct: 106 TEVLFERLTKRQYSEAKRAENMEAEIQCICEEEARDAYEDDIVL----VRENDTLEQMAA 161
Query: 557 EPSAIQVLIKNY 568
I+ ++
Sbjct: 162 TVEEIRERVEVL 173
>d1s3ga1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus
globisporus [TaxId: 1459]}
Length = 182
Score = 35.2 bits (80), Expect = 0.025
Identities = 23/155 (14%), Positives = 38/155 (24%), Gaps = 7/155 (4%)
Query: 384 LCFYGPPGVGKTSIAKSIARALNREYFRFSVGGMSDVAEIKGHRRTYVGAMPGKVIQCMK 443
+ G PG GK + A I S G D+ T +G +
Sbjct: 3 IVLMGLPGAGKGTQADRIVEKYG--TPHISTG---DMFRAAIQEGTELGVKAKSFMDQGA 57
Query: 444 KTKTENPLVLIDEVDKIGKGYSGDPASALLEMLDPEQNANFLDHYLDVPVDLSRVLFICT 503
E + ++ E +G Q D+ + VL I
Sbjct: 58 LVPDEVTIGIVRERLSKSDCDNGFLLDGF--PRTVPQAEALDQLLADMGRKIEHVLNIQV 115
Query: 504 ANVIDTIPEPLRDRMEMIDVSGYVAEEKVAIAAQY 538
D + + V + A +
Sbjct: 116 EKEELIARLTADDNPDTVTNRLEVNMNQTAPLLAF 150
>d1nn5a_ c.37.1.1 (A:) Thymidylate kinase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 209
Score = 35.3 bits (80), Expect = 0.027
Identities = 23/207 (11%), Positives = 61/207 (29%), Gaps = 11/207 (5%)
Query: 381 GKILCFYGPPGVGKTSIAKSIARALNR-----EYFRFSVGGMSDVAEIKGHRRTYVGAMP 435
G ++ G GK++ ++ + AL E RF + + +
Sbjct: 3 GALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDVED 62
Query: 436 GKVIQCMKKTKTENPLVLIDEVDKIGKGYSGDPASALLEMLDPEQNAN---FLDHYLDVP 492
V + E ++ +++ + A + + ++N + + +P
Sbjct: 63 HSVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAKENFSLDWCKQPDVGLP 122
Query: 493 VDLSRVLFICTANVIDTIPEPLRDRMEMIDVSGYVAEEKVAIAAQYLIPQAMKESGLSPE 552
+ +R E + + M ++ S E
Sbjct: 123 KPDLVLFLQLQLADAAKRGAFGHERYENGAFQERALRCFHQLMKDTTLNWKMVDASKSIE 182
Query: 553 QITLEPSAIQVLIKNYCRESGVRNLQK 579
+ + I+VL ++ + + L +
Sbjct: 183 AVHED---IRVLSEDAIATATEKPLGE 206
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus
solfataricus [TaxId: 2287]}
Length = 283
Score = 35.5 bits (80), Expect = 0.027
Identities = 11/43 (25%), Positives = 14/43 (32%)
Query: 381 GKILCFYGPPGVGKTSIAKSIARALNREYFRFSVGGMSDVAEI 423
I G GK+SI K LN Y + + I
Sbjct: 29 APITLVLGLRRTGKSSIIKIGINELNLPYIYLDLRKFEERNYI 71
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum
[TaxId: 44689]}
Length = 194
Score = 34.9 bits (79), Expect = 0.031
Identities = 27/142 (19%), Positives = 49/142 (34%), Gaps = 15/142 (10%)
Query: 379 TQGKILCFYGPPGVGKTSIAKSIARALNREYFRFSVGGMSDVAEIKGHRRTYVGAMPGKV 438
++ ++ G PG GK + +I R + S G + + G G++
Sbjct: 4 SKPNVVFVLGGPGSGKGTQCANIVRDFG--WVHLSAGDLLRQEQQSGS-------KDGEM 54
Query: 439 IQCMKKTKTENPLVLIDEVDKIGKGYSGDPASALLEMLDPEQNANFLDHYLDVPVDLSRV 498
I M K P ++ ++ K + + E+N N + + VD V
Sbjct: 55 IATMIKNGEIVPSIVTVKLLKNAIDANQGKNFLVDGFPRNEENNNSWEENMKDFVDTKFV 114
Query: 499 LFICTANVIDTIPEPLRDRMEM 520
LF D E + R+
Sbjct: 115 LF------FDCPEEVMTQRLLK 130
>d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein
{Escherichia coli [TaxId: 562]}
Length = 241
Score = 34.9 bits (80), Expect = 0.039
Identities = 14/70 (20%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Query: 380 QGKILCFYGPPGVGKTSIAKSIARALNREYFRFSVGGMSDVAEIKGHRRTYVGAMPGKVI 439
QG+++ G G GK+++ K I R E + + G D+A + + +
Sbjct: 28 QGEVIGIVGRSGSGKSTLTKLIQRFYIPENGQVLIDGH-DLALADPNWLRRQVGVVLQDN 86
Query: 440 QCMKKTKTEN 449
+ ++ +N
Sbjct: 87 VLLNRSIIDN 96
>d1bifa1 c.37.1.7 (A:37-249)
6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase,
kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 213
Score = 34.6 bits (78), Expect = 0.040
Identities = 10/32 (31%), Positives = 14/32 (43%)
Query: 383 ILCFYGPPGVGKTSIAKSIARALNREYFRFSV 414
++ G P GKT I+K + R LN
Sbjct: 4 LIVMVGLPARGKTYISKKLTRYLNFIGVPTRE 35
>d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 182
Score = 34.2 bits (77), Expect = 0.043
Identities = 8/34 (23%), Positives = 18/34 (52%)
Query: 381 GKILCFYGPPGVGKTSIAKSIARALNREYFRFSV 414
G+++ GP VGK+++ + + + +F S
Sbjct: 2 GRVVVLSGPSAVGKSTVVRCLRERIPNLHFSVSA 35
>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 35
Score = 31.2 bits (70), Expect = 0.043
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 1135 ENNVCPECKKTFSSAHHMKVHLRIHSGIRPY 1165
+ C C K F +H+ H HSG +PY
Sbjct: 4 KQVACEICGKIFRDVYHLNRHKLSHSGEKPY 34
Score = 30.8 bits (69), Expect = 0.048
Identities = 12/26 (46%), Positives = 14/26 (53%)
Query: 1170 EYCEKAFSTQYSRKAHIRTHTGEKPY 1195
E C K F Y H +H+GEKPY
Sbjct: 9 EICGKIFRDVYHLNRHKLSHSGEKPY 34
Score = 28.1 bits (62), Expect = 0.51
Identities = 11/24 (45%), Positives = 12/24 (50%)
Query: 829 CDKSFASATNYKNHMRIHSGEKPY 852
C K F + H HSGEKPY
Sbjct: 11 CGKIFRDVYHLNRHKLSHSGEKPY 34
>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 29
Score = 30.8 bits (69), Expect = 0.044
Identities = 10/29 (34%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Query: 1192 EKPYRCAHEFCSKSFKTSGDLQKHVRTHT 1220
E+P++C + C + + S L H+R+HT
Sbjct: 1 ERPFKC--QICPYASRNSSQLTVHLRSHT 27
Score = 28.9 bits (64), Expect = 0.28
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Query: 789 ERPFPCPVLGCDRSFTTSNIRKVHIRTHTGE 819
ERPF C + C + S+ VH+R+HTG+
Sbjct: 1 ERPFKCQI--CPYASRNSSQLTVHLRSHTGD 29
>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo
sapiens) [TaxId: 9606]}
Length = 29
Score = 30.7 bits (69), Expect = 0.047
Identities = 12/27 (44%), Positives = 18/27 (66%), Gaps = 2/27 (7%)
Query: 1194 PYRCAHEFCSKSFKTSGDLQKHVRTHT 1220
PY C + C+ SFKT G+L KH+++
Sbjct: 1 PYHCTY--CNFSFKTKGNLTKHMKSKA 25
>d1vpla_ c.37.1.12 (A:) Putative ABC transporter TM0544 {Thermotoga
maritima [TaxId: 2336]}
Length = 238
Score = 34.6 bits (79), Expect = 0.051
Identities = 21/125 (16%), Positives = 42/125 (33%), Gaps = 3/125 (2%)
Query: 360 EDVKKRILEFIAVSQLKGT-TQGKILCFYGPPGVGKTSIAKSIARALNREYFRFSVGGMS 418
+D++KRI + + + +G+I GP G GKT+ + I+ + +V G +
Sbjct: 6 KDLRKRIGKKEILKGISFEIEEGEIFGLIGPNGAGKTTTLRIISTLIKPSSGIVTVFGKN 65
Query: 419 DVAEIKGHRRTYVGAMPGKVIQCMKKTKTENPLVLIDEVDKIGKGYSGDPASALLEMLDP 478
V E R + +P + E + + E+
Sbjct: 66 VVEEPH-EVRKLISYLPEEAGAYRNMQGIEYL-RFVAGFYASSSSEIEEMVERATEIAGL 123
Query: 479 EQNAN 483
+
Sbjct: 124 GEKIK 128
>d2a5yb3 c.37.1.20 (B:109-385) CED-4, NB-ARC domain {Caenorhabditis
elegans [TaxId: 6239]}
Length = 277
Score = 34.8 bits (79), Expect = 0.056
Identities = 10/49 (20%), Positives = 16/49 (32%), Gaps = 3/49 (6%)
Query: 355 DHYGMEDVKKRILEFIAVSQLKGTTQGKILCFYGPPGVGKTSIAKSIAR 403
Y E R+++ + L +G G GK+ IA
Sbjct: 21 TCYIREYHVDRVIKKLDEM---CDLDSFFLFLHGRAGSGKSVIASQALS 66
>d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV,
N-terminal domain {Archaeon Sulfolobus solfataricus
[TaxId: 2287]}
Length = 242
Score = 34.3 bits (78), Expect = 0.058
Identities = 21/113 (18%), Positives = 32/113 (28%), Gaps = 4/113 (3%)
Query: 380 QGKILCFYGPPGVGKTSIAKSIARALNREYFRFSVGGM---SDVAEIKGHRRTYVGAMPG 436
G+ GP G GKT+ + IA S+ I +G +
Sbjct: 30 NGERFGILGPSGAGKTTFMRIIAGLDVPSTGELYFDDRLVASNGKLIVPPEDRKIGMVFQ 89
Query: 437 KVIQCMKKTKTENPLVLIDEVDKIGKGYSGDPASALLEMLDPEQNANFLDHYL 489
T EN + K+ K + ++LD N L
Sbjct: 90 TWALYPNLTAFENIAFPL-TNMKMSKEEIRKRVEEVAKILDIHHVLNHFPREL 141
>d1g41a_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Length = 443
Score = 34.7 bits (79), Expect = 0.063
Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 12/65 (18%)
Query: 352 LDDDHYGMEDVKKRILEFIAV----------SQLKGTTQGKILCFYGPPGVGKTSIAKSI 401
LD G D K+ + IA+ L+ K + GP GVGKT IA+ +
Sbjct: 12 LDQHIIGQADAKRAVA--IALRNRWRRMQLQEPLRHEVTPKNILMIGPTGVGKTEIARRL 69
Query: 402 ARALN 406
A+ N
Sbjct: 70 AKLAN 74
>d1q3ta_ c.37.1.1 (A:) CMP kinase {Streptococcus pneumoniae [TaxId:
1313]}
Length = 223
Score = 34.2 bits (77), Expect = 0.069
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 388 GPPGVGKTSIAKSIARALNREYF 410
GP GK+++AK IA+ Y
Sbjct: 10 GPASSGKSTVAKIIAKDFGFTYL 32
>d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos
taurus), mitochondrial izozyme-2 [TaxId: 9913]}
Length = 190
Score = 33.8 bits (76), Expect = 0.072
Identities = 13/66 (19%), Positives = 21/66 (31%), Gaps = 5/66 (7%)
Query: 384 LCFYGPPGVGKTSIAKSIARALNREYFRFSVGGMSDVAEIKGHRRTYVGAMPGKVIQCMK 443
GPPG GK + A +A+ + G D+ + +G + K
Sbjct: 6 AVLLGPPGAGKGTQAPKLAKNFC--VCHLATG---DMLRAMVASGSELGKKLKATMDAGK 60
Query: 444 KTKTEN 449
E
Sbjct: 61 LVSDEM 66
>d2onka1 c.37.1.12 (A:1-240) Molybdate/tungstate import ATP-binding
protein WtpC (ModC) {Archaeoglobus fulgidus [TaxId:
2234]}
Length = 240
Score = 34.2 bits (78), Expect = 0.074
Identities = 28/137 (20%), Positives = 49/137 (35%), Gaps = 15/137 (10%)
Query: 361 DVKKRILEF-IAVSQLKGTTQGKILCFYGPPGVGKTSIAKSIARALNREYFRFSVGGMSD 419
+KR+ F + V G GP G GK+ + IA + + + G D
Sbjct: 6 RAEKRLGNFRLNVDFEMG---RDYCVLLGPTGAGKSVFLELIAGIVKPDRGEVRLNGA-D 61
Query: 420 VAEIKGHRRTYVGAMPGKVIQCMKKTKTENPLVLIDEVDKIGKGYSGDPASALLEMLDPE 479
+ + RR +G +P + N + V+++ + + EM +
Sbjct: 62 ITPLPPERRG-IGFVPQDYALFPHLSVYRNIAYGLRNVERV------ERDRRVREMAEKL 114
Query: 480 QNANFLDHYLDVPVDLS 496
A+ LD P LS
Sbjct: 115 GIAHLLDRK---PARLS 128
>d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK,
N-terminal domain {Archaeon Thermococcus litoralis
[TaxId: 2265]}
Length = 240
Score = 34.1 bits (78), Expect = 0.077
Identities = 29/147 (19%), Positives = 45/147 (30%), Gaps = 20/147 (13%)
Query: 359 MEDVKKRILEFIAVSQLKGT-TQGKILCFYGPPGVGKTSIAKSIARALNREYFRFSVGGM 417
+ DV K E AV ++ G+ + GP G GKT+ + IA + +G
Sbjct: 6 LVDVWKVFGEVTAVREMSLEVKDGEFMILLGPSGCGKTTTLRMIAGLEEPSRGQIYIGDK 65
Query: 418 SDVAEIKGHRRTYVGAMPGKVIQCMKKTKTENPLVLIDEVDKIGKGYSGDP-------AS 470
KG V Q P + + + P
Sbjct: 66 LVADPEKGIFVPPKDRDIAMVFQSY----ALYPHMTVYDNIAFPLKLRKVPRQEIDQRVR 121
Query: 471 ALLEMLDPEQNANFLDHYLD-VPVDLS 496
+ E+L L L+ P +LS
Sbjct: 122 EVAELLG-------LTELLNRKPRELS 141
>d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 196
Score = 33.8 bits (76), Expect = 0.083
Identities = 7/36 (19%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
Query: 382 KILCFYGPPGVGKTSIAKSIARALNREYFRFSVGGM 417
++ G PG GK + + + + + + S G +
Sbjct: 9 SVIFVLGGPGAGKGTQCEKLVKDYS--FVHLSAGDL 42
>d1f5na1 a.114.1.1 (A:284-583) Interferon-induced guanylate-binding
protein 1 (GBP1), C-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 300
Score = 33.9 bits (77), Expect = 0.100
Identities = 23/182 (12%), Positives = 57/182 (31%), Gaps = 5/182 (2%)
Query: 111 QHSINITTDYNDTFYHVMQMAAENDDNFNDHKVSLVKDLSEVYSALMQEVIKTVRDIISM 170
+ ++ + V ++DL + Y ++ I+ + +
Sbjct: 122 DRCSGLLQVIFSPLEEEVKAGIYSKPGGYRLFVQKLQDLKKKYYEEPRKGIQAEEILQTY 181
Query: 171 NPLYKEQLMILLQQENSPVVDNPIYLADLGAALTGAEGTEQQAILEEMDIPKRLMLSLSL 230
+ +LQ + + + +L EM M+
Sbjct: 182 LKSKESMTDAILQTDQT---LTEKEKEIEVERVKAESAQASAKMLHEMQRKNEQMMEQKE 238
Query: 231 LKKELELNKLQQKIGREVEEKVKQQHRKYI--LQEQLKAIKKELGLEKDDKDAIEEKFRE 288
+ L +L +K+ + + +K+Q R LQEQ + +K+ E + +
Sbjct: 239 RSYQEHLKQLTEKMENDRVQLLKEQERTLALKLQEQEQLLKEGFQKESRIMKNEIQDLQT 298
Query: 289 RI 290
++
Sbjct: 299 KM 300
>d2i1qa2 c.37.1.11 (A:65-322) DNA repair protein Rad51, catalytic
domain {Archaeon Methanococcus voltae [TaxId: 2188]}
Length = 258
Score = 33.5 bits (75), Expect = 0.11
Identities = 13/57 (22%), Positives = 17/57 (29%)
Query: 377 GTTQGKILCFYGPPGVGKTSIAKSIARALNREYFRFSVGGMSDVAEIKGHRRTYVGA 433
G + F G G GKT I L F F E+ + Y+
Sbjct: 30 GLESQSVTEFAGVFGSGKTQIMHQSCVNLQNPEFLFYDEEAVSKGEVAQPKAVYIDT 86
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain
{Bacteriophage T4 [TaxId: 10665]}
Length = 152
Score = 32.8 bits (73), Expect = 0.11
Identities = 9/29 (31%), Positives = 13/29 (44%)
Query: 382 KILCFYGPPGVGKTSIAKSIARALNREYF 410
KI+ G PG GK++ A+ Y
Sbjct: 3 KIILTIGCPGSGKSTWAREFIAKNPGFYN 31
>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea
mays) [TaxId: 4577]}
Length = 189
Score = 33.3 bits (75), Expect = 0.12
Identities = 7/35 (20%), Positives = 11/35 (31%), Gaps = 2/35 (5%)
Query: 383 ILCFYGPPGVGKTSIAKSIARALNREYFRFSVGGM 417
+ G P GK + + I S G +
Sbjct: 5 KVMISGAPASGKGTQCELIKTKYQ--LAHISAGDL 37
>d1n0wa_ c.37.1.11 (A:) DNA repair protein Rad51, catalytic domain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 242
Score = 33.6 bits (75), Expect = 0.12
Identities = 10/39 (25%), Positives = 13/39 (33%)
Query: 377 GTTQGKILCFYGPPGVGKTSIAKSIARALNREYFRFSVG 415
G G I +G GKT I ++A R
Sbjct: 19 GIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGE 57
>d1r6bx2 c.37.1.20 (X:169-436) ClpA, an Hsp100 chaperone, AAA+
modules {Escherichia coli [TaxId: 562]}
Length = 268
Score = 33.4 bits (76), Expect = 0.12
Identities = 26/142 (18%), Positives = 49/142 (34%), Gaps = 31/142 (21%)
Query: 344 DLTQAAKI-LDDDHYGMEDVKKRILEFIAVSQLKGTTQGKILCFYGPPGVGKTSIAKSIA 402
+L Q A++ D G E +R ++ + + +L G GVGKT+IA+ +A
Sbjct: 7 NLNQLARVGGIDPLIGREKELERAIQVLC----RRRKNNPLLV--GESGVGKTAIAEGLA 60
Query: 403 RALNREYFRFSVGGMSDVAEIKGHRRTYVGAMPGKV--------------IQCMKKTKTE 448
+ + DV E+ Y + + + +
Sbjct: 61 WRIVQG----------DVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDT 110
Query: 449 NPLVLIDEVDKIGKGYSGDPAS 470
N ++ IDE+ I +
Sbjct: 111 NSILFIDEIHTIIGAGAASGGQ 132
>d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos
taurus), mitochondrial izozyme-3 [TaxId: 9913]}
Length = 189
Score = 32.9 bits (74), Expect = 0.12
Identities = 14/66 (21%), Positives = 22/66 (33%), Gaps = 5/66 (7%)
Query: 384 LCFYGPPGVGKTSIAKSIARALNREYFRFSVGGMSDVAEIKGHRRTYVGAMPGKVIQCMK 443
G PG GK +++ I + S G D+ R T +G + I K
Sbjct: 9 AAIMGAPGSGKGTVSSRITKHFE--LKHLSSG---DLLRDNMLRGTEIGVLAKTFIDQGK 63
Query: 444 KTKTEN 449
+
Sbjct: 64 LIPDDV 69
>d2jdid3 c.37.1.11 (D:82-357) Central domain of beta subunit of F1
ATP synthase {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 276
Score = 33.6 bits (77), Expect = 0.13
Identities = 14/70 (20%), Positives = 27/70 (38%), Gaps = 9/70 (12%)
Query: 381 GKILCFYGPPGVGKTSIAKSIARALNREYFRFSV-GGM----SDVAEIKGHRRTYVGAMP 435
GKI F G GVGKT + + + + + +SV G+ + ++ + +
Sbjct: 69 GKIGLF-GGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDL---YHEMIESGV 124
Query: 436 GKVIQCMKKT 445
+ K
Sbjct: 125 INLKDATSKV 134
>d3b60a1 c.37.1.12 (A:329-581) Multidrug resistance ABC transporter
MsbA, C-terminal domain {Salmonella typhimurium [TaxId:
90371]}
Length = 253
Score = 33.3 bits (76), Expect = 0.13
Identities = 15/80 (18%), Positives = 24/80 (30%)
Query: 380 QGKILCFYGPPGVGKTSIAKSIARALNREYFRFSVGGMSDVAEIKGHRRTYVGAMPGKVI 439
GK + G G GK++IA I R + + + G R V + V
Sbjct: 40 AGKTVALVGRSGSGKSTIASLITRFYDIDEGHILMDGHDLREYTLASLRNQVALVSQNVH 99
Query: 440 QCMKKTKTENPLVLIDEVDK 459
+E +
Sbjct: 100 LFNDTVANNIAYARTEEYSR 119
>d1szpa2 c.37.1.11 (A:145-395) DNA repair protein Rad51, catalytic
domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId:
4932]}
Length = 251
Score = 33.5 bits (75), Expect = 0.13
Identities = 8/42 (19%), Positives = 13/42 (30%)
Query: 377 GTTQGKILCFYGPPGVGKTSIAKSIARALNREYFRFSVGGMS 418
G G I +G GK+ + ++A G
Sbjct: 30 GVETGSITELFGEFRTGKSQLCHTLAVTCQIPLDIGGGEGKC 71
>d1nlfa_ c.37.1.11 (A:) Hexameric replicative helicase repA
{Escherichia coli [TaxId: 562]}
Length = 274
Score = 33.5 bits (75), Expect = 0.14
Identities = 8/31 (25%), Positives = 13/31 (41%)
Query: 375 LKGTTQGKILCFYGPPGVGKTSIAKSIARAL 405
L G + P G GK+ +A +A +
Sbjct: 23 LPNMVAGTVGALVSPGGAGKSMLALQLAAQI 53
>d2vp4a1 c.37.1.1 (A:12-208) Deoxyribonucleoside kinase {Fruit fly
(Drosophila melanogaster) [TaxId: 7227]}
Length = 197
Score = 33.1 bits (74), Expect = 0.14
Identities = 8/38 (21%), Positives = 11/38 (28%)
Query: 379 TQGKILCFYGPPGVGKTSIAKSIARALNREYFRFSVGG 416
TQ + G G GKT+ + N
Sbjct: 7 TQPFTVLIEGNIGSGKTTYLNHFEKYKNDICLLTEPVE 44
>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide
biosynthesis protein MobB {Bacillus stearothermophilus
[TaxId: 1422]}
Length = 165
Score = 32.5 bits (73), Expect = 0.15
Identities = 8/33 (24%), Positives = 13/33 (39%)
Query: 382 KILCFYGPPGVGKTSIAKSIARALNREYFRFSV 414
+ G GKT++ + A RE +R
Sbjct: 2 NVWQVVGYKHSGKTTLMEKWVAAAVREGWRVGT 34
>d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC
domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 251
Score = 33.0 bits (75), Expect = 0.15
Identities = 10/56 (17%), Positives = 20/56 (35%)
Query: 380 QGKILCFYGPPGVGKTSIAKSIARALNREYFRFSVGGMSDVAEIKGHRRTYVGAMP 435
G++ GP G GK+++A + + + G + V A+
Sbjct: 39 PGEVTALVGPNGSGKSTVAALLQNLYQPTGGQLLLDGKPLPQYEHRYLHRQVAAVG 94
>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo
sapiens) [TaxId: 9606]}
Length = 28
Score = 29.5 bits (66), Expect = 0.16
Identities = 13/28 (46%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
Query: 1195 YRCAHEFCSKSFKTSGDLQKHVRTHTDE 1222
Y C E C K L+KH+RTHTD
Sbjct: 2 YIC--EECGIRAKKPSMLKKHIRTHTDV 27
Score = 27.1 bits (60), Expect = 0.89
Identities = 10/29 (34%), Positives = 11/29 (37%), Gaps = 2/29 (6%)
Query: 1165 YKCPVEYCEKAFSTQYSRKAHIRTHTGEK 1193
Y C C K HIRTHT +
Sbjct: 2 YICE--ECGIRAKKPSMLKKHIRTHTDVR 28
Score = 26.0 bits (57), Expect = 2.1
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 1138 VCPECKKTFSSAHHMKVHLRIHSGIR 1163
+C EC +K H+R H+ +R
Sbjct: 3 ICEECGIRAKKPSMLKKHIRTHTDVR 28
>d1ef1c_ a.137.5.1 (C:) Moesin tail domain {Human (Homo sapiens)
[TaxId: 9606]}
Length = 90
Score = 31.0 bits (70), Expect = 0.17
Identities = 10/33 (30%), Positives = 18/33 (54%)
Query: 246 REVEEKVKQQHRKYILQEQLKAIKKELGLEKDD 278
R EE+ + + +Q+ LKA+ EL +D+
Sbjct: 16 RSEEERTTEAEKNERVQKHLKALTSELANARDE 48
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 198
Score = 32.8 bits (73), Expect = 0.17
Identities = 12/52 (23%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Query: 364 KRILEFIAVSQLKGTTQGK-ILCFYGPPGVGKTSIAKSIARALNREYFRFSV 414
+ ++F+ + L T G+ +L G GKT++A +++ L + V
Sbjct: 4 RDRIDFLCKTILAIKTAGRLVLGIDGLSRSGKTTLANQLSQTLREQGISVCV 55
>d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS
kinase) {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Length = 208
Score = 32.9 bits (74), Expect = 0.17
Identities = 8/39 (20%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Query: 373 SQLKGTTQGKILCFYGPPGVGKTSIAKSIARALNREYFR 411
++L+ +G + G GK+++A + L R+
Sbjct: 17 TELRNQ-RGLTIWLTGLSASGKSTLAVELEHQLVRDRRV 54
>d1akya1 c.37.1.1 (A:3-130,A:169-220) Adenylate kinase {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 180
Score = 32.6 bits (73), Expect = 0.18
Identities = 7/23 (30%), Positives = 12/23 (52%)
Query: 384 LCFYGPPGVGKTSIAKSIARALN 406
+ GPPG GK + A ++ +
Sbjct: 5 MVLIGPPGAGKGTQAPNLQERFH 27
>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon
Pyrococcus furiosus [TaxId: 2261]}
Length = 237
Score = 32.7 bits (73), Expect = 0.19
Identities = 8/32 (25%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Query: 381 GKILCFYGP-PGVGKTSIAKSIARALNREYFR 411
G+I+ G GKT++ +++ AL +
Sbjct: 2 GRIISIVSGKGGTGKTTVTANLSVALGDRGRK 33
>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 29.2 bits (65), Expect = 0.20
Identities = 9/23 (39%), Positives = 16/23 (69%)
Query: 1197 CAHEFCSKSFKTSGDLQKHVRTH 1219
C H+ C+K F+ + ++KH+ TH
Sbjct: 4 CPHKGCTKMFRDNSAMRKHLHTH 26
>d1zboa1 b.122.1.10 (A:2-198) Hypothetical protein BPP1347
{Bordetella parapertussis [TaxId: 519]}
Length = 197
Score = 32.2 bits (72), Expect = 0.22
Identities = 12/129 (9%), Positives = 32/129 (24%), Gaps = 14/129 (10%)
Query: 103 WVGSNVTAQHSINITTDYNDTFYHVMQMAAENDDNFNDHKVSLVKDLSEVYSALMQEVIK 162
+ Q DD ++ + + +
Sbjct: 81 LELACTGTGRFRLHACTQGKYGLWTGQAEPVPDDA--------PLEVPPELARSASALGR 132
Query: 163 TVRDIISMNPLYKEQLMILLQQENSPVVDNPIYLADLGAALTGAEGTEQQAILEEMDIPK 222
+ + M + +D+ ++AD A + ++ +L +
Sbjct: 133 LIARLQREGVPPHIMPMAAPFR-----LDDCGWVADRWAEMLSLPPADKARLL-LLPPLD 186
Query: 223 RLMLSLSLL 231
RL ++L
Sbjct: 187 RLREIDAVL 195
>d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human
(Homo sapiens) [TaxId: 9606]}
Length = 178
Score = 32.1 bits (72), Expect = 0.22
Identities = 8/34 (23%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 381 GKILCFYGPPGVGKTSIAKSIARALNREYFRFSV 414
K L G GVG+ I ++ + + F + +
Sbjct: 3 RKTLVLLGAHGVGRRHIKNTLITK-HPDRFAYPI 35
>d1sq5a_ c.37.1.6 (A:) Pantothenate kinase PanK {Escherichia coli
[TaxId: 562]}
Length = 308
Score = 32.8 bits (74), Expect = 0.23
Identities = 12/56 (21%), Positives = 22/56 (39%), Gaps = 3/56 (5%)
Query: 362 VKKRILEFIAVSQLKGTTQGK---ILCFYGPPGVGKTSIAKSIARALNREYFRFSV 414
+ + + Q GT + I+ G VGK++ A+ + L+R V
Sbjct: 58 ISSNLRRQAVLEQFLGTNGQRIPYIISIAGSVAVGKSTTARVLQALLSRWPEHRRV 113
>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 75
Score = 30.0 bits (67), Expect = 0.23
Identities = 10/37 (27%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Query: 1188 THTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTDEFQ 1224
Y+C H C +++ +L H+ H +EFQ
Sbjct: 12 PRLQNSTYQCKH--CDSKLQSTAELTSHLNIHNEEFQ 46
>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA
{Escherichia coli [TaxId: 562]}
Length = 279
Score = 32.6 bits (73), Expect = 0.26
Identities = 31/237 (13%), Positives = 74/237 (31%), Gaps = 16/237 (6%)
Query: 382 KILCFYGPPGVGKTSIAKSIARALNREYFRFSV------GGMSDVAEIKGHRRTYVGAMP 435
++ G GVGKT++A +IA L F + +S + P
Sbjct: 21 GLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPAAHLSMTLNGSLNNLQVSRIDP 80
Query: 436 GKVIQCMKKTKTENPLVLIDE-----VDKIGKGYSGDPASALLEMLDPEQNANFLDHYLD 490
+ + ++ E +DE +++ + + + + A +D
Sbjct: 81 HEETERYRQHVLETKGKELDEAGKRLLEEDLRSPCTEEIAVFQAFSRVIREAGKRFVVMD 140
Query: 491 -VPVDLSRVLFICTANVIDTIPEPLRDRMEMIDVSGYVAEEKVAIAAQYLIPQAMKESGL 549
P + +L T I + + ++ + + + +P+
Sbjct: 141 TAPTGHTLLLLDATGAYHREIAKKMGEKGHFTTPMMLLQDPERTKVLLVTLPETTPVLEA 200
Query: 550 SPEQITLEPSAIQV--LIKNYCR--ESGVRNLQKHIEKVTRKVALTIVKKESDKVTV 602
+ Q LE + I I N L + + ++ ++ + +V +
Sbjct: 201 ANLQADLERAGIHPWGWIINNSLSIADTRSPLLRMRAQQELPQIESVKRQHASRVAL 257
>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 28
Score = 28.6 bits (63), Expect = 0.26
Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Query: 1193 KPYRCAHEFCSKSFKTSGDLQKHVRTHTD 1221
KPY+C C + S L KH+R H+D
Sbjct: 2 KPYKCKT--CDYAAADSSSLNKHLRIHSD 28
Score = 27.0 bits (59), Expect = 1.1
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Query: 820 KPYVCGEAGCDKSFASATNYKNHMRIHS 847
KPY C CD + A +++ H+RIHS
Sbjct: 2 KPYKCKT--CDYAAADSSSLNKHLRIHS 27
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 190
Score = 31.8 bits (71), Expect = 0.30
Identities = 10/33 (30%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 382 KILCFYGPPGVGKTSIAKSIARALNREYFRFSV 414
+ + GP G GK+++ K + + + F FSV
Sbjct: 1 RPVVLSGPSGAGKSTLLKKLFQEHS-SIFGFSV 32
>d1yloa1 b.49.3.1 (A:67-147) Aminopeptidase YpdE {Shigella flexneri
[TaxId: 623]}
Length = 81
Score = 30.1 bits (68), Expect = 0.32
Identities = 10/53 (18%), Positives = 19/53 (35%), Gaps = 10/53 (18%)
Query: 725 KVLPVGGIKEKTIAAKRVGVHT--------ILMPEENKKDFTDLPEYIREGLN 769
VLPVG ++ + V + T +L + D + + + G
Sbjct: 14 DVLPVGNVRMAARQLQPVRITTREECKIPGLLDGDRQGNDVSAM--RVDIGAR 64
>d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 182
Score = 31.8 bits (71), Expect = 0.32
Identities = 12/34 (35%), Positives = 14/34 (41%), Gaps = 2/34 (5%)
Query: 384 LCFYGPPGVGKTSIAKSIARALNREYFRFSVGGM 417
L G PG GK + A+ I A S G M
Sbjct: 3 LVLMGLPGAGKGTQAEKIVAAYG--IPHISTGDM 34
>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 28
Score = 28.6 bits (63), Expect = 0.33
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 1139 CPECKKTFSSAHHMKVHLRIH 1159
C EC + SS +++H RIH
Sbjct: 5 CSECSYSCSSKAALRIHERIH 25
>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium
pasteurianum [TaxId: 1501]}
Length = 269
Score = 32.2 bits (72), Expect = 0.35
Identities = 18/139 (12%), Positives = 37/139 (26%), Gaps = 18/139 (12%)
Query: 382 KILCFYGPPGVGKTSIAKSIARALNREYFR----------FSVGGMSDVAEIKGHRRTYV 431
+ + YG G+GK++ +++ L+ S + K T
Sbjct: 2 RQVAIYGKGGIGKSTTTQNLTSGLHAMGKTIMVVGCDPKADSTRLLLGGLAQKSVLDTLR 61
Query: 432 GAMPGKVIQCMKKTKTENPLVL---IDEVDKIGKGYSGDPASALLEMLDPEQNANFLDHY 488
+ + K + E G + +LE L + D
Sbjct: 62 EEGEDVELDSILKEGYGGIRCVESGGPEPGVGCAGRGIITSINMLEQLGA-----YTDDL 116
Query: 489 LDVPVDLSRVLFICTANVI 507
V D+ + +
Sbjct: 117 DYVFYDVLGDVVCGGFAMP 135
>d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter,
ATP-binding protein {Methanosarcina acetivorans [TaxId:
2214]}
Length = 229
Score = 32.0 bits (72), Expect = 0.35
Identities = 12/71 (16%), Positives = 20/71 (28%), Gaps = 2/71 (2%)
Query: 380 QGKILCFYGPPGVGKTSIAKSIARALNREYFRFSVGGMSDVAEIKGHRRTYVGAMPGKVI 439
G+ GP G GKT + IA + R + G + + +
Sbjct: 25 SGEYFVILGPTGAGKTLFLELIAGFHVPDSGRILLDGKDVTDLSP--EKHDIAFVYQNYS 82
Query: 440 QCMKKTKTENP 450
+N
Sbjct: 83 LFPHMNVKKNL 93
>d1ihua1 c.37.1.10 (A:1-296) Arsenite-translocating ATPase ArsA
{Escherichia coli [TaxId: 562]}
Length = 296
Score = 32.3 bits (72), Expect = 0.37
Identities = 13/30 (43%), Positives = 16/30 (53%)
Query: 382 KILCFYGPPGVGKTSIAKSIARALNREYFR 411
L F G GVGKTSI+ + A L + R
Sbjct: 9 PYLFFTGKGGVGKTSISCATAIRLAEQGKR 38
>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 28.4 bits (63), Expect = 0.38
Identities = 11/28 (39%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Query: 822 YVCGEAGCDKSFASATNYKNHMRIHSGE 849
+VC E C K+F ++ K H +H+GE
Sbjct: 3 HVCAE--CGKAFVESSKLKRHQLVHTGE 28
Score = 27.7 bits (61), Expect = 0.54
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 1137 NVCPECKKTFSSAHHMKVHLRIHSG 1161
+VC EC K F + +K H +H+G
Sbjct: 3 HVCAECGKAFVESSKLKRHQLVHTG 27
Score = 26.1 bits (57), Expect = 2.3
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 1202 CSKSFKTSGDLQKHVRTHTDE 1222
C K+F S L++H HT E
Sbjct: 8 CGKAFVESSKLKRHQLVHTGE 28
Score = 26.1 bits (57), Expect = 2.4
Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 2/26 (7%)
Query: 852 YVCQVRDCQKRFTEYSSLYKHTLVHS 877
+VC +C K F E S L +H LVH+
Sbjct: 3 HVCA--ECGKAFVESSKLKRHQLVHT 26
>d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase {Escherichia
coli [TaxId: 562]}
Length = 179
Score = 31.4 bits (70), Expect = 0.42
Identities = 6/27 (22%), Positives = 9/27 (33%)
Query: 384 LCFYGPPGVGKTSIAKSIARALNREYF 410
+ G P GK + A+ I
Sbjct: 3 IILLGAPVAGKGTQAQFIMEKYGIPQI 29
>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 37
Score = 28.1 bits (63), Expect = 0.43
Identities = 11/24 (45%), Positives = 12/24 (50%), Gaps = 4/24 (16%)
Query: 1138 VCPECKKTFSSAH----HMKVHLR 1157
C CK+ F SA HM VH R
Sbjct: 7 TCSFCKREFRSAQALGGHMNVHRR 30
>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3'
phosphatase, C-terminal domain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 172
Score = 31.4 bits (70), Expect = 0.45
Identities = 5/30 (16%), Positives = 13/30 (43%)
Query: 382 KILCFYGPPGVGKTSIAKSIARALNREYFR 411
+++ G PG GK++ + + +
Sbjct: 15 EVVVAVGFPGAGKSTFIQEHLVSAGYVHVN 44
>d1odfa_ c.37.1.6 (A:) Hypothetical protein Ygr205W {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 286
Score = 31.7 bits (71), Expect = 0.45
Identities = 12/49 (24%), Positives = 20/49 (40%), Gaps = 4/49 (8%)
Query: 366 ILEFIA--VSQLKGTTQGK--ILCFYGPPGVGKTSIAKSIARALNREYF 410
+EF+ + + T + F GP G GK+ + I L +Y
Sbjct: 8 TIEFLDKYIPEWFETGNKCPLFIFFSGPQGSGKSFTSIQIYNHLMEKYG 56
>d1xpua3 c.37.1.11 (A:129-417) Transcription termination factor Rho,
ATPase domain {Escherichia coli [TaxId: 562]}
Length = 289
Score = 31.5 bits (71), Expect = 0.51
Identities = 11/61 (18%), Positives = 25/61 (40%), Gaps = 2/61 (3%)
Query: 381 GKILCFYGPPGVGKTSIAKSIARALNREYFRFSVGGMSDVAEIKGHRRTYVGAMPGKVIQ 440
+ L PP GKT + ++IA+++ + + + + E + G+V+
Sbjct: 44 QRGLIV-APPKAGKTMLLQNIAQSIAYNHPDCVLMVLL-IDERPEEVTEMQRLVKGEVVA 101
Query: 441 C 441
Sbjct: 102 S 102
>d1sxjc2 c.37.1.20 (C:12-238) Replication factor C3 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 227
Score = 31.6 bits (70), Expect = 0.51
Identities = 29/108 (26%), Positives = 45/108 (41%), Gaps = 17/108 (15%)
Query: 354 DDHYGMEDVKKRILEFIAVSQLKGTTQGKI--LCFYGPPGVGKTSIAKSIARALNREYFR 411
D+ YG +V + +F+ +GK+ L FYGPPG GKTS ++AR + + +
Sbjct: 14 DEVYGQNEVITTVRKFVD--------EGKLPHLLFYGPPGTGKTSTIVALAREIYGKNYS 65
Query: 412 FSV--GGMSDVAEIKGHRRTYVGAMPGKVIQCMKKTKTENPLVLIDEV 457
V SD I R + I L+++DE
Sbjct: 66 NMVLELNASDDRGIDVVRNQIKDFASTRQIFSKGFK-----LIILDEA 108
>d1p5zb_ c.37.1.1 (B:) Deoxycytidine kinase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 241
Score = 31.5 bits (70), Expect = 0.53
Identities = 4/31 (12%), Positives = 10/31 (32%)
Query: 380 QGKILCFYGPPGVGKTSIAKSIARALNREYF 410
+ K + G GK++ + +
Sbjct: 1 RIKKISIEGNIAAGKSTFVNILKQLCEDWEV 31
>d1wfea_ g.80.1.1 (A:) AN1-type zinc finger protein 1 {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 86
Score = 29.6 bits (66), Expect = 0.55
Identities = 14/83 (16%), Positives = 25/83 (30%), Gaps = 19/83 (22%)
Query: 835 SATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRSYRQL 894
S N K Y C + C ++ IC C +++
Sbjct: 9 SEVNVVKERPKTDEHKSYSCSFKGCTDV---------------ELVAVICPYCEKNF--- 50
Query: 895 CTLNVHKKTNHRESKNKKPSNRV 917
C L +++H K + R+
Sbjct: 51 C-LRHRHQSDHDCEKLEVAKPRM 72
>d1x3ca1 g.37.1.1 (A:8-68) Zinc finger protein 292, ZNF292 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 61
Score = 28.5 bits (63), Expect = 0.58
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 1193 KPYRCAHEFCSKSFKTSGDLQKHVR 1217
+PYRC H+ C +F +L H +
Sbjct: 19 RPYRCVHQGCFAAFTIQQNLILHYQ 43
>d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal
recognition particle receptor FtsY {Thermus aquaticus
[TaxId: 271]}
Length = 207
Score = 31.2 bits (70), Expect = 0.58
Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Query: 380 QGKILCFYGPPGVGKT-SIAKSIARALNRE 408
+G+++ G GVGKT +IAK + R
Sbjct: 5 KGRVVLVVGVNGVGKTTTIAK-LGRYYQNL 33
>d1pzna2 c.37.1.11 (A:96-349) DNA repair protein Rad51, catalytic
domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Length = 254
Score = 31.2 bits (69), Expect = 0.59
Identities = 10/42 (23%), Positives = 16/42 (38%)
Query: 377 GTTQGKILCFYGPPGVGKTSIAKSIARALNREYFRFSVGGMS 418
G I +G G GKT +A ++A + + G
Sbjct: 32 GIETQAITEVFGEFGSGKTQLAHTLAVMVQLPPEEGGLNGSV 73
>d2ocpa1 c.37.1.1 (A:37-277) Deoxyguanosine kinase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 241
Score = 30.8 bits (68), Expect = 0.78
Identities = 6/35 (17%), Positives = 12/35 (34%)
Query: 382 KILCFYGPPGVGKTSIAKSIARALNREYFRFSVGG 416
+ L G VGK++ K + + +
Sbjct: 3 RRLSIEGNIAVGKSTFVKLLTKTYPEWHVATEPVA 37
>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 32
Score = 27.3 bits (60), Expect = 0.83
Identities = 12/28 (42%), Positives = 14/28 (50%), Gaps = 2/28 (7%)
Query: 1192 EKPYRCAHEFCSKSFKTSGDLQKHVRTH 1219
EKPY C C FK + HVR+H
Sbjct: 1 EKPYSCP--VCGLRFKRKDRMSYHVRSH 26
>d1vhoa1 b.49.3.1 (A:70-152) Putative endoglucanase TM1048
{Thermotoga maritima [TaxId: 2336]}
Length = 83
Score = 28.9 bits (65), Expect = 0.85
Identities = 8/22 (36%), Positives = 15/22 (68%)
Query: 725 KVLPVGGIKEKTIAAKRVGVHT 746
++ PVGG+ K + A +V ++T
Sbjct: 13 RLEPVGGVDPKVVYASKVRIYT 34
>d4tmka_ c.37.1.1 (A:) Thymidylate kinase {Escherichia coli [TaxId:
562]}
Length = 210
Score = 30.7 bits (68), Expect = 0.88
Identities = 8/31 (25%), Positives = 12/31 (38%)
Query: 381 GKILCFYGPPGVGKTSIAKSIARALNREYFR 411
K + G G GKT+ + L + R
Sbjct: 2 SKYIVIEGLEGAGKTTARNVVVETLEQLGIR 32
>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus
laevis [TaxId: 8355]}
Length = 31
Score = 27.2 bits (60), Expect = 0.89
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 1162 IRPYKCPVEYCEKAFSTQYSRKAHIRTHTGE 1192
++ Y C C A++ + +AH+ HTGE
Sbjct: 1 MKRYICSFADCGAAYNKNWKLQAHLSKHTGE 31
>d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 213
Score = 30.3 bits (67), Expect = 0.96
Identities = 6/25 (24%), Positives = 11/25 (44%)
Query: 388 GPPGVGKTSIAKSIARALNREYFRF 412
G GK+S+ I + L + +
Sbjct: 9 GGTASGKSSVCAKIVQLLGQNEVDY 33
>d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA,
C-terminal domain {Lactococcus lactis [TaxId: 1358]}
Length = 242
Score = 30.6 bits (69), Expect = 0.98
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 380 QGKILCFYGPPGVGKTSIAKSIAR 403
I+ F GP G GK++I + R
Sbjct: 27 PNSIIAFAGPSGGGKSTIFSLLER 50
>d1tf7a2 c.37.1.11 (A:256-497) Circadian clock protein KaiC
{Synechococcus sp. strain PCC 7942 (Anacystis nidulans
R2) [TaxId: 1140]}
Length = 242
Score = 30.7 bits (68), Expect = 0.98
Identities = 8/36 (22%), Positives = 11/36 (30%)
Query: 377 GTTQGKILCFYGPPGVGKTSIAKSIARALNREYFRF 412
G + I+ G G GKT + R
Sbjct: 22 GFFKDSIILATGATGTGKTLLVSRFVENACANKERA 57
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 186
Score = 30.3 bits (67), Expect = 1.0
Identities = 10/33 (30%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Query: 382 KILCFYGPPGVGKTSIAKSIARALNREYFRFSV 414
+ + GP G GK+++ K + + F FSV
Sbjct: 2 RPIVISGPSGTGKSTLLKKLFAEYP-DSFGFSV 33
>d2afhe1 c.37.1.10 (E:1-289) Nitrogenase iron protein {Azotobacter
vinelandii [TaxId: 354]}
Length = 289
Score = 30.6 bits (68), Expect = 1.1
Identities = 24/177 (13%), Positives = 47/177 (26%), Gaps = 16/177 (9%)
Query: 382 KILCFYGPPGVGKTSIAKSIARALNREYFR----------FSVGGMSDVAEIKGHRRTYV 431
+ YG G+GK++ +++ AL + S +
Sbjct: 3 RQCAIYGKGGIGKSTTTQNLVAALAEMGKKVMIVGCDPKADSTRLILHSKAQNTIMEMAA 62
Query: 432 GAMPGKVIQCMKKTKTENPLVLI-----DEVDKIGKGYSGDPASALLEMLDP-EQNANFL 485
A + ++ K V E G A LE E + +F+
Sbjct: 63 EAGTVEDLELEDVLKAGYGGVKCVESGGPEPGVGCAGRGVITAINFLEEEGAYEDDLDFV 122
Query: 486 DHYLDVPVDLSRVLFICTANVIDTIPEPLRDRMEMIDVSGYVAEEKVAIAAQYLIPQ 542
+ + V N I M + + +++ V A +
Sbjct: 123 FYDVLGDVVCGGFAMPIRENKAQEIYIVCSGEMMAMYAANNISKGIVKYANSGSVRL 179
>d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance
regulator, CFTR, nucleotide-binding domain {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 281
Score = 30.7 bits (69), Expect = 1.1
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 380 QGKILCFYGPPGVGKTSIAKSIAR 403
+G++L G G GKTS+ I
Sbjct: 61 KGEMLAITGSTGSGKTSLLMLILG 84
>d1dvpa2 g.50.1.1 (A:149-220) Hrs {Fruit fly (Drosophila melanogaster)
[TaxId: 7227]}
Length = 72
Score = 28.1 bits (62), Expect = 1.2
Identities = 11/64 (17%), Positives = 23/64 (35%), Gaps = 13/64 (20%)
Query: 1134 SENNVCPECKKTFSSAHHMKVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEK 1193
++ VC C+ F+ + K H R + +C +++ + + EK
Sbjct: 11 ADGRVCHRCRVEFTFTNR-KHHCRNCGQVFCGQC------------TAKQCPLPKYGIEK 57
Query: 1194 PYRC 1197
R
Sbjct: 58 EVRV 61
>d1qhla_ c.37.1.12 (A:) Cell division protein MukB {Escherichia coli
[TaxId: 562]}
Length = 222
Score = 30.4 bits (67), Expect = 1.2
Identities = 8/51 (15%), Positives = 16/51 (31%)
Query: 381 GKILCFYGPPGVGKTSIAKSIARALNREYFRFSVGGMSDVAEIKGHRRTYV 431
+ G G GK++ + AL + ++ G R +
Sbjct: 24 ELVTTLSGGNGAGKSTTMAAFVTALIPDLTLLHFRNTTEAGATSGSRDKGL 74
>d1g6ha_ c.37.1.12 (A:) MJ1267 {Archaeon Methanococcus jannaschii
[TaxId: 2190]}
Length = 254
Score = 30.3 bits (68), Expect = 1.2
Identities = 13/48 (27%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Query: 359 MEDVKKRILEFIAVSQLKGT-TQGKILCFYGPPGVGKTSIAKSIARAL 405
E++ K EF A+ + + +G + GP G GK+++ I L
Sbjct: 7 TENIVKYFGEFKALDGVSISVNKGDVTLIIGPNGSGKSTLINVITGFL 54
>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus
laevis [TaxId: 8355]}
Length = 28
Score = 27.0 bits (59), Expect = 1.2
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 1195 YRCAHEFCSKSFKTSGDLQKHVRTHT 1220
Y C E C K+FK L+ H +HT
Sbjct: 2 YVCHFENCGKAFKKHNQLKVHQFSHT 27
Score = 26.2 bits (57), Expect = 2.0
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 792 FPCPVLGCDRSFTTSNIRKVHIRTHT 817
+ C C ++F N KVH +HT
Sbjct: 2 YVCHFENCGKAFKKHNQLKVHQFSHT 27
Score = 25.8 bits (56), Expect = 2.5
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 852 YVCQVRDCQKRFTEYSSLYKHTLVHS 877
YVC +C K F +++ L H H+
Sbjct: 2 YVCHFENCGKAFKKHNQLKVHQFSHT 27
Score = 25.8 bits (56), Expect = 2.5
Identities = 11/26 (42%), Positives = 12/26 (46%)
Query: 1165 YKCPVEYCEKAFSTQYSRKAHIRTHT 1190
Y C E C KAF K H +HT
Sbjct: 2 YVCHFENCGKAFKKHNQLKVHQFSHT 27
>d1gpua1 c.36.1.10 (A:3-337) Transketolase (TK), PP module {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 335
Score = 30.5 bits (68), Expect = 1.3
Identities = 6/42 (14%), Positives = 16/42 (38%), Gaps = 4/42 (9%)
Query: 256 HRKYILQEQLKAIKKELGLEKDDK----DAIEEKFRERIKDK 293
H + + +K +K + G D + + +++ I
Sbjct: 261 HGAPLKADDVKQLKSKFGFNPDKSFVVPQEVYDHYQKTILKP 302
>d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal
recognition particle receptor FtsY {Escherichia coli
[TaxId: 562]}
Length = 211
Score = 30.0 bits (67), Expect = 1.4
Identities = 14/78 (17%), Positives = 28/78 (35%), Gaps = 3/78 (3%)
Query: 383 ILCFYGPPGVGK-TSIAKSIARALNREYFRFSVGGMSDVAEIKGHRRTYVGAMPGKVIQC 441
++ G GVGK T+I K +AR ++ + + V +
Sbjct: 11 VILMVGVNGVGKTTTIGK-LARQFEQQGKSVMLAAGDTFR-AAAVEQLQVWGQRNNIPVI 68
Query: 442 MKKTKTENPLVLIDEVDK 459
+ T ++ V+ D +
Sbjct: 69 AQHTGADSASVIFDAIQA 86
>d1tmka_ c.37.1.1 (A:) Thymidylate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 214
Score = 29.9 bits (66), Expect = 1.4
Identities = 8/38 (21%), Positives = 14/38 (36%), Gaps = 2/38 (5%)
Query: 381 GKILCFYGPPGVGKTSIAKSIARALNRE--YFRFSVGG 416
GK++ G GKT+ + + L +F
Sbjct: 3 GKLILIEGLDRTGKTTQCNILYKKLQPNCKLLKFPERS 40
>d1sxjb2 c.37.1.20 (B:7-230) Replication factor C4 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 224
Score = 30.0 bits (66), Expect = 1.4
Identities = 28/215 (13%), Positives = 61/215 (28%), Gaps = 41/215 (19%)
Query: 354 DDHYGMEDVKKRILEFIAVSQLKGTTQGKI--LCFYGPPGVGKTSIAKSIARALNREYFR 411
D G ++ R+ + G + + G PG+GKT+ +A L
Sbjct: 15 SDIVGNKETIDRLQQIAK--------DGNMPHMIISGMPGIGKTTSVHCLAHELLG-RSY 65
Query: 412 FSVGGMSDVAEIKGHRRTYVGAMPGKVIQCMKKTKTENPLVLIDEVDKIGKGYSGDPASA 471
+ ++ +G V Q ++I + + A
Sbjct: 66 ADGVLELNASDDRGID--VVRNQIKHFAQKKLHLPPGKHKIVILDEADS---MTAGAQQA 120
Query: 472 LLEMLDPEQNANFLDHYLDVPVDLSRVLFICTANVIDTIPEPLRDRMEMIDVSGYVAEEK 531
L + + + F N + I EPL+ + ++ S E+
Sbjct: 121 LRRT---------------MELYSNSTRFAFACNQSNKIIEPLQSQCAILRYSKLSDEDV 165
Query: 532 VAIAAQYLIPQAMKESGLSPEQITLEPSAIQVLIK 566
+ Q + + + ++ +I
Sbjct: 166 LKRLLQIIKLE----------DVKYTNDGLEAIIF 190
>g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus
[TaxId: 2261]}
Length = 292
Score = 30.1 bits (66), Expect = 1.5
Identities = 8/23 (34%), Positives = 11/23 (47%)
Query: 383 ILCFYGPPGVGKTSIAKSIARAL 405
I G G GK+S+ +I L
Sbjct: 25 INLIIGQNGSGKSSLLDAILVGL 47
>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon
Archaeoglobus fulgidus [TaxId: 2234]}
Length = 232
Score = 29.7 bits (65), Expect = 1.6
Identities = 7/31 (22%), Positives = 13/31 (41%), Gaps = 1/31 (3%)
Query: 382 KILCFYGP-PGVGKTSIAKSIARALNREYFR 411
+ + G GKT+I ++ AL +
Sbjct: 2 RTITVASGKGGTGKTTITANLGVALAQLGHD 32
>d1j3ga_ d.118.1.1 (A:) AmpD protein {Citrobacter freundii [TaxId:
546]}
Length = 187
Score = 29.7 bits (66), Expect = 1.6
Identities = 25/167 (14%), Positives = 43/167 (25%), Gaps = 22/167 (13%)
Query: 744 VHTILMPEENKKDFTDLPEYIREGLNVHFVSEWRQVYDLVFEHTSERPFPCPVLGCDRSF 803
VH I +P E+ ++ F F + L
Sbjct: 33 VHNISLPPG---------EFGGPWIDALFTGTIDPNAHPYFAGIAHLRVSAHCLIRRDGE 83
Query: 804 TTSNIRKVHIRTHTGEKPYVCGEAGCDKSFASATNYKNHMRIHSGEKPYVCQVRDCQKRF 863
R G C+ F+ + + + Y
Sbjct: 84 IV-QYVPFDKRAWHAGVSSYQGRERCN-DFSIGIELEGTDTLAYTDAQYQQLAAVTNALI 141
Query: 864 TEYSSLYKHTLVHSDIRPFICDR--CP------RSYRQLCTLNVHKK 902
T Y ++ + H +I P +R P +R L T + HK+
Sbjct: 142 TRYPAIANNMTGHCNIAP---ERKTDPGPSFDWARFRALVTPSSHKE 185
>d1l7vc_ c.37.1.12 (C:) ABC transporter involved in vitamin B12
uptake, BtuD {Escherichia coli [TaxId: 562]}
Length = 231
Score = 29.9 bits (67), Expect = 1.7
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 380 QGKILCFYGPPGVGKTSIAKSIAR 403
G+IL GP G GK+++ +A
Sbjct: 24 AGEILHLVGPNGAGKSTLLARMAG 47
>d1b0ua_ c.37.1.12 (A:) ATP-binding subunit of the histidine
permease {Salmonella typhimurium [TaxId: 90371]}
Length = 258
Score = 29.8 bits (67), Expect = 1.8
Identities = 12/48 (25%), Positives = 19/48 (39%), Gaps = 7/48 (14%)
Query: 360 EDVKKRILEFIAVSQLKGTT----QGKILCFYGPPGVGKTSIAKSIAR 403
D+ KR LKG + G ++ G G GK++ + I
Sbjct: 6 IDLHKRYGGHEV---LKGVSLQARAGDVISIIGSSGSGKSTFLRCINF 50
>d1htwa_ c.37.1.18 (A:) Hypothetical protein HI0065 {Haemophilus
influenzae [TaxId: 727]}
Length = 158
Score = 29.3 bits (65), Expect = 1.8
Identities = 8/51 (15%), Positives = 20/51 (39%), Gaps = 3/51 (5%)
Query: 359 MEDVKKRILEFIAVSQLKGTTQGKILCFYGPPGVGKTSIAKSIARALNREY 409
M K+ E + + ++ G G GKT++ + + + + +
Sbjct: 14 MLRFGKKFAEILLKLHTEK---AIMVYLNGDLGAGKTTLTRGMLQGIGHQG 61
>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli
[TaxId: 562]}
Length = 224
Score = 29.7 bits (65), Expect = 1.9
Identities = 9/31 (29%), Positives = 14/31 (45%), Gaps = 2/31 (6%)
Query: 391 GVGKTSIAKSIARALNREYFRFSVGGMSDVA 421
VGKT + ++ +A +R G VA
Sbjct: 12 EVGKTVASCALLQAAKAAGYR--TAGYKPVA 40
>d1wfka_ g.50.1.1 (A:) Zinc finger FYVE domain containing protein 19
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 88
Score = 28.1 bits (62), Expect = 1.9
Identities = 16/96 (16%), Positives = 24/96 (25%), Gaps = 28/96 (29%)
Query: 1118 GSSGGGGGGTVKKSTSSENNVCPECKKTFSSAHHMKVHLRIHSGIRPYKCPVEYCEKAFS 1177
GSSG G + C C F+ + Y C C +AF
Sbjct: 1 GSSGSSG----------MESRCYGCAVKFTLFK------------KEYGCK--NCGRAFC 36
Query: 1178 TQYSRKAHIRTHTGEKPYR----CAHEFCSKSFKTS 1209
+ + G + C S +
Sbjct: 37 NGCLSFSALVPRAGNTQQKVCKQCHTILTRGSSDNA 72
>d1tf7a1 c.37.1.11 (A:14-255) Circadian clock protein KaiC
{Synechococcus sp. strain PCC 7942 (Anacystis nidulans
R2) [TaxId: 1140]}
Length = 242
Score = 29.6 bits (65), Expect = 2.1
Identities = 7/28 (25%), Positives = 9/28 (32%)
Query: 377 GTTQGKILCFYGPPGVGKTSIAKSIARA 404
G G+ G G GKT +
Sbjct: 22 GLPIGRSTLVSGTSGTGKTLFSIQFLYN 49
>d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter
{Thermotoga maritima, TM1139 [TaxId: 2336]}
Length = 240
Score = 29.5 bits (66), Expect = 2.2
Identities = 12/57 (21%), Positives = 24/57 (42%), Gaps = 7/57 (12%)
Query: 359 MEDVKKRILEFIAVSQLKGTT----QGKILCFYGPPGVGKTSIAKSIARALNREYFR 411
++ + A +KG +G+I+ G G GKT+ +IA + + +
Sbjct: 9 VQSLHVYYGAIHA---IKGIDLKVPRGQIVTLIGANGAGKTTTLSAIAGLVRAQKGK 62
>d2p67a1 c.37.1.10 (A:1-327) LAO/AO transport system kinase ArgK
{Escherichia coli [TaxId: 562]}
Length = 327
Score = 29.8 bits (66), Expect = 2.2
Identities = 11/62 (17%), Positives = 19/62 (30%), Gaps = 1/62 (1%)
Query: 375 LKGTTQGKILCFYGPPGVGKTSIAKSIARALNREYFRFSVGGMSDVAEIKGHRRTYVGAM 434
+ L G PG GK++ ++ L RE + +V D +
Sbjct: 48 MPYCGNTLRLGVTGTPGAGKSTFLEAFGMLLIREGLKVAV-IAVDPSSPVTGGSILGDKT 106
Query: 435 PG 436
Sbjct: 107 RM 108
>d1e2ka_ c.37.1.1 (A:) Thymidine kinase {Herpes simplex virus type
1, different strains [TaxId: 10298]}
Length = 329
Score = 29.6 bits (66), Expect = 2.3
Identities = 8/42 (19%), Positives = 17/42 (40%)
Query: 385 CFYGPPGVGKTSIAKSIARALNREYFRFSVGGMSDVAEIKGH 426
GP G+GKT+ + + +R+ + M+ +
Sbjct: 8 YIDGPHGMGKTTTTQLLVALGSRDDIVYVPEPMTYWRVLGAS 49
>d1cr2a_ c.37.1.11 (A:) Gene 4 protein (g4p, DNA primase), helicase
domain {Bacteriophage T7 [TaxId: 10760]}
Length = 277
Score = 29.6 bits (65), Expect = 2.3
Identities = 6/37 (16%), Positives = 14/37 (37%)
Query: 375 LKGTTQGKILCFYGPPGVGKTSIAKSIARALNREYFR 411
G G+++ G+GK++ + A +
Sbjct: 29 TLGARGGEVIMVTSGSGMGKSTFVRQQALQWGTAMGK 65
>d2hyda1 c.37.1.12 (A:324-578) Putative multidrug export
ATP-binding/permease protein SAV1866 {Staphylococcus
aureus [TaxId: 1280]}
Length = 255
Score = 29.4 bits (66), Expect = 2.5
Identities = 12/57 (21%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Query: 380 QGKILCFYGPPGVGKTSIAKSIARALNREYFRFSVGGMSDVAEIK-GHRRTYVGAMP 435
+G+ + F G G GK+++ I R + + + G ++ + G R +G +
Sbjct: 43 KGETVAFVGMSGGGKSTLINLIPRFYDVTSGQILIDGH-NIKDFLTGSLRNQIGLVQ 98
>d1ls1a2 c.37.1.10 (A:89-295) GTPase domain of the signal sequence
recognition protein Ffh {Thermus aquaticus [TaxId: 271]}
Length = 207
Score = 29.3 bits (65), Expect = 2.5
Identities = 10/40 (25%), Positives = 16/40 (40%), Gaps = 2/40 (5%)
Query: 373 SQLKGTTQGKILCFYGPPGVGKT-SIAKSIARALNREYFR 411
++L + G G GKT + AK +A + R
Sbjct: 2 ARLPVLKDRNLWFLVGLQGSGKTTTAAK-LALYYKGKGRR 40
>g1ii8.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus
[TaxId: 2261]}
Length = 369
Score = 29.4 bits (64), Expect = 2.5
Identities = 15/62 (24%), Positives = 23/62 (37%), Gaps = 4/62 (6%)
Query: 382 KILCFYGPPGVGKTSIAKSIARALNREYFRFSVGGMSDVAEIK-GHRRTYVGAMPGKVIQ 440
I G G GK+S+ +I L Y+ + + K G R TY+ + K
Sbjct: 24 GINLIIGQNGSGKSSLLDAILVGL---YWPLRIKDIKKDEFTKVGARDTYIDLIFEKDGT 80
Query: 441 CM 442
Sbjct: 81 KY 82
>d1vhea1 b.49.3.1 (A:73-162) Hypothetical protein YsdC {Bacillus
subtilis [TaxId: 1423]}
Length = 90
Score = 27.4 bits (61), Expect = 2.8
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 725 KVLPVGGIKEKTIAAKRVGVHT 746
+ VGG + + A+RV + T
Sbjct: 14 RFQTVGGWWAQVMLAQRVTIVT 35
>d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence
recognition protein Ffh {Archaeon Acidianus ambivalens
[TaxId: 2283]}
Length = 211
Score = 29.0 bits (64), Expect = 2.8
Identities = 11/63 (17%), Positives = 21/63 (33%), Gaps = 1/63 (1%)
Query: 383 ILCFYGPPGVGKTSIAKSIARALNREYFRFSVGGMSDVAEIKGHRRTYVGAMPGKVIQCM 442
++ G G GK + A +A ++ F+ + G DV + V
Sbjct: 14 VIMLVGVQGTGKATTAGKLAYFYKKKGFKVGLVGA-DVYRPAALEQLQQLGQQIGVPVYG 72
Query: 443 KKT 445
+
Sbjct: 73 EPG 75
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 166
Score = 28.5 bits (62), Expect = 2.9
Identities = 8/23 (34%), Positives = 12/23 (52%), Gaps = 1/23 (4%)
Query: 381 GKILCFYGPPGVGKTSIAKSIAR 403
GK+L F G GKT++ +
Sbjct: 1 GKLL-FLGLDNAGKTTLLHMLKN 22
>d1v5wa_ c.37.1.11 (A:) Meiotic recombination protein DMC1/LIM15
homolog {Human (Homo sapiens) [TaxId: 9606]}
Length = 258
Score = 29.3 bits (64), Expect = 3.0
Identities = 6/26 (23%), Positives = 11/26 (42%)
Query: 377 GTTQGKILCFYGPPGVGKTSIAKSIA 402
G I +G GKT ++ ++
Sbjct: 33 GIESMAITEAFGEFRTGKTQLSHTLC 58
>d3dhwc1 c.37.1.12 (C:1-240) Methionine import ATP-binding protein
MetN {Escherichia coli [TaxId: 562]}
Length = 240
Score = 29.1 bits (65), Expect = 3.2
Identities = 23/121 (19%), Positives = 42/121 (34%), Gaps = 12/121 (9%)
Query: 380 QGKILCFYGPPGVGKTSIAKSIARALNREYFRFSVGGMSDVAEIKGHR----RTYVGAMP 435
G+I G G GK+++ + + V G ++ + R +G +
Sbjct: 30 AGQIYGVIGASGAGKSTLIRCVNLLERPTEGSVLVDGQ-ELTTLSESELTKARRQIGMIF 88
Query: 436 GKVIQCMKKTKTENPLVLIDEVDKIGKGYSGDPASALLEMLDPEQNANFLDHYLDVPVDL 495
+T N + L E+D K + LL ++ + D Y P +L
Sbjct: 89 QHFNLLSSRTVFGN-VALPLELDNTPKDEVKRRVTELLSLVG---LGDKHDSY---PSNL 141
Query: 496 S 496
S
Sbjct: 142 S 142
>d1r9ja2 c.36.1.10 (A:1-336) Transketolase (TK), PP module
{Leishmania mexicana mexicana [TaxId: 44270]}
Length = 336
Score = 29.1 bits (64), Expect = 3.3
Identities = 10/40 (25%), Positives = 16/40 (40%), Gaps = 4/40 (10%)
Query: 256 HRKYILQEQLKAIKKELGLEKDDK----DAIEEKFRERIK 291
H + +E + IK + G + K D + FR I
Sbjct: 261 HGAPLGEEDIANIKAKFGRDPQKKYDVDDDVRAVFRMHID 300
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus)
[TaxId: 10029]}
Length = 186
Score = 28.5 bits (62), Expect = 3.6
Identities = 25/184 (13%), Positives = 56/184 (30%), Gaps = 12/184 (6%)
Query: 366 ILEFIAVSQLKGTTQGKILCFYGPPGVGKTSIAKSIARALNREYFRFSVGGMSDVAEIKG 425
+L+F+ + + GK++ F G GKT++ + ++ ++
Sbjct: 3 VLQFLGLYK----KTGKLV-FLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGM 57
Query: 426 HRRTYVGAMPGKVIQCMKKTKTENPLVLIDEVDKIGKGYSGDPASALLEMLDPEQNANFL 485
T+ + + + K ++ VD + L ++ E AN
Sbjct: 58 TFTTFDLGGHIQ-ARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETIANVP 116
Query: 486 DHYLDVPVDLSRVLFICTANVIDTIPEPLRDRMEMIDVSGYVAEEKVAIAAQYLIPQAMK 545
L +D A + + E + +E A + + +K
Sbjct: 117 ILILGNKIDRPE------AISEERLREMFGLYGQTTGKGSVSLKELNARPLEVFMCSVLK 170
Query: 546 ESGL 549
G
Sbjct: 171 RQGY 174
>d1a7ja_ c.37.1.6 (A:) Phosphoribulokinase {Rhodobacter sphaeroides
[TaxId: 1063]}
Length = 288
Score = 28.8 bits (64), Expect = 3.8
Identities = 5/21 (23%), Positives = 10/21 (47%)
Query: 388 GPPGVGKTSIAKSIARALNRE 408
G G G +++ + + RE
Sbjct: 11 GSSGAGTSTVKHTFDQIFRRE 31
>d1gsia_ c.37.1.1 (A:) Thymidylate kinase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 208
Score = 28.5 bits (62), Expect = 4.4
Identities = 8/41 (19%), Positives = 15/41 (36%), Gaps = 5/41 (12%)
Query: 383 ILCFYGPPGVGKTSIAKSIARALNRE-----YFRFSVGGMS 418
++ G G GK ++ + ++ A F G S
Sbjct: 2 LIAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFPRYGQS 42
>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 67
Score = 26.2 bits (58), Expect = 4.4
Identities = 9/27 (33%), Positives = 12/27 (44%), Gaps = 2/27 (7%)
Query: 818 GEKPYVCGEAGCDKSFASATNYKNHMR 844
G + C C + F +TN K H R
Sbjct: 12 GGGLHRCLA--CARYFIDSTNLKTHFR 36
Score = 26.2 bits (58), Expect = 4.5
Identities = 9/28 (32%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
Query: 1191 GEKPYRCAHEFCSKSFKTSGDLQKHVRT 1218
G +RC C++ F S +L+ H R+
Sbjct: 12 GGGLHRCLA--CARYFIDSTNLKTHFRS 37
Score = 25.8 bits (57), Expect = 7.3
Identities = 6/19 (31%), Positives = 10/19 (52%)
Query: 1139 CPECKKTFSSAHHMKVHLR 1157
C C + F + ++K H R
Sbjct: 18 CLACARYFIDSTNLKTHFR 36
>d1osna_ c.37.1.1 (A:) Thymidine kinase {Varicella-zoster virus
[TaxId: 10335]}
Length = 331
Score = 28.8 bits (64), Expect = 4.7
Identities = 6/22 (27%), Positives = 9/22 (40%)
Query: 385 CFYGPPGVGKTSIAKSIARALN 406
G G+GKT+ A+
Sbjct: 9 YLDGAYGIGKTTAAEEFLHHFA 30
>d1u0la2 c.37.1.8 (A:69-293) Probable GTPase EngC (YjeQ), C-terminal
domain {Thermotoga maritima [TaxId: 2336]}
Length = 225
Score = 28.1 bits (62), Expect = 5.1
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 380 QGKILCFYGPPGVGKTSIAKSIARALNRE 408
+GKI G GVGK+S+ +I L
Sbjct: 94 KGKISTMAGLSGVGKSSLLNAINPGLKLR 122
>d1p6xa_ c.37.1.1 (A:) Thymidine kinase {Equine herpesvirus type 4
[TaxId: 10331]}
Length = 333
Score = 28.4 bits (63), Expect = 5.3
Identities = 6/23 (26%), Positives = 13/23 (56%)
Query: 384 LCFYGPPGVGKTSIAKSIARALN 406
+ G G+GK++ + +A A +
Sbjct: 9 IYLDGVYGIGKSTTGRVMASAAS 31
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL3 [TaxId: 10090]}
Length = 176
Score = 28.0 bits (61), Expect = 5.9
Identities = 8/32 (25%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Query: 372 VSQLKGTTQGKI-LCFYGPPGVGKTSIAKSIA 402
+ +LK ++ + G GKT++ K +A
Sbjct: 6 LRKLKSAPDQEVRILLLGLDNAGKTTLLKQLA 37
>d1vmaa2 c.37.1.10 (A:82-294) GTPase domain of the signal
recognition particle receptor FtsY {Thermotoga maritima
[TaxId: 2336]}
Length = 213
Score = 27.8 bits (61), Expect = 6.6
Identities = 7/28 (25%), Positives = 11/28 (39%), Gaps = 1/28 (3%)
Query: 383 ILCFYGPPGVGK-TSIAKSIARALNREY 409
++ G G GK TS K ++
Sbjct: 13 VIMVVGVNGTGKTTSCGKLAKMFVDEGK 40
>d2fvga1 b.49.3.1 (A:65-148) Endoglucanase TM1049 {Thermotoga
maritima [TaxId: 2336]}
Length = 84
Score = 26.2 bits (58), Expect = 6.8
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 725 KVLPVGGIKEKTIAAKRVGVHTI 747
LPVGG+ + + K V V +
Sbjct: 14 SFLPVGGVDPRILPGKVVQVKNL 36
>d1frfl_ e.18.1.1 (L:) Nickel-iron hydrogenase, large subunit
{Desulfovibrio fructosovorans [TaxId: 878]}
Length = 543
Score = 28.2 bits (62), Expect = 7.0
Identities = 23/145 (15%), Positives = 41/145 (28%), Gaps = 4/145 (2%)
Query: 296 PPPVMEVLNEELAKLGFLESHSSEFNVTRN--YLDWLTSLPWGIQSEENLDLTQAAKILD 353
P ++ + +L H F ++D +L L +
Sbjct: 89 IPANARMMRNLVMASQYLHDHLVHFYHLHALDWVDVTAALKADPNKAAKLAASIDTARTG 148
Query: 354 DDHYGMEDVKKRILEFIAVSQLKGTTQGKILCFYGPPGVGKTSIAKSIARALNREYFRFS 413
+ ++ V+ ++ F+ QL T L G IA A E
Sbjct: 149 NSEKALKAVQDKLKAFVESGQLGIFTNAYFL--GGHKAYYLPPEVNLIATAHYLEALHMQ 206
Query: 414 VGGMSDVAEIKGHRRTYVGAMPGKV 438
V S +A + G + G
Sbjct: 207 VKAASAMAILGGKNPHTQFTVVGGC 231
>d2ahob1 a.60.14.1 (B:85-175) Eukaryotic initiation factor 2alpha,
eIF2alpha, domain 2 {Sulfolobus solfataricus [TaxId:
2287]}
Length = 91
Score = 26.2 bits (58), Expect = 8.7
Identities = 3/26 (11%), Positives = 12/26 (46%)
Query: 268 IKKELGLEKDDKDAIEEKFRERIKDK 293
I + G+ + + E+ + +++
Sbjct: 66 ILIDAGVPEIWVKPLLEEASKHAEER 91
>d1y0ya1 b.49.3.1 (A:73-163) Frv operon protein FrvX {Pyrococcus
horikoshii [TaxId: 53953]}
Length = 91
Score = 25.9 bits (57), Expect = 9.3
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 725 KVLPVGGIKEKTIAAKRVGVHT 746
+V P+GG+ KT+ A+R V
Sbjct: 14 RVAPIGGVDPKTLIAQRFKVWI 35
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.315 0.132 0.378
Gapped
Lambda K H
0.267 0.0367 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 4,464,377
Number of extensions: 219660
Number of successful extensions: 1348
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1263
Number of HSP's successfully gapped: 389
Length of query: 1230
Length of database: 2,407,596
Length adjustment: 96
Effective length of query: 1134
Effective length of database: 1,089,516
Effective search space: 1235511144
Effective search space used: 1235511144
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (27.1 bits)