Query psy897
Match_columns 125
No_of_seqs 121 out of 1732
Neff 9.8
Searched_HMMs 46136
Date Sat Aug 17 00:21:53 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy897.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/897hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1221|consensus 99.8 2.4E-19 5.1E-24 130.5 9.9 118 6-125 5-150 (467)
2 PLN02996 fatty acyl-CoA reduct 99.8 2.8E-18 6E-23 127.5 11.7 120 6-125 4-156 (491)
3 KOG1502|consensus 99.8 6.8E-19 1.5E-23 123.2 7.6 111 12-125 5-124 (327)
4 PLN02503 fatty acyl-CoA reduct 99.8 7E-18 1.5E-22 127.2 11.4 119 7-125 113-263 (605)
5 PRK15181 Vi polysaccharide bio 99.7 7.8E-17 1.7E-21 115.2 8.4 112 10-125 12-136 (348)
6 PF01073 3Beta_HSD: 3-beta hyd 99.7 3.3E-17 7.1E-22 114.2 5.9 105 17-125 1-111 (280)
7 COG1087 GalE UDP-glucose 4-epi 99.7 2.4E-16 5.3E-21 108.7 7.6 103 14-124 1-112 (329)
8 TIGR02622 CDP_4_6_dhtase CDP-g 99.7 5.5E-16 1.2E-20 110.7 9.3 111 10-124 1-121 (349)
9 PLN02662 cinnamyl-alcohol dehy 99.7 8.4E-16 1.8E-20 108.3 9.0 110 12-124 3-121 (322)
10 PF07993 NAD_binding_4: Male s 99.6 2.1E-16 4.5E-21 108.4 4.8 103 18-121 1-127 (249)
11 COG1086 Predicted nucleoside-d 99.6 5.5E-16 1.2E-20 114.5 6.3 114 8-124 245-370 (588)
12 PLN00198 anthocyanidin reducta 99.6 1.9E-15 4.1E-20 107.5 8.8 111 11-124 7-125 (338)
13 PLN02986 cinnamyl-alcohol dehy 99.6 2.7E-15 5.9E-20 106.0 8.9 111 12-125 4-123 (322)
14 PLN02650 dihydroflavonol-4-red 99.6 2.3E-15 4.9E-20 107.6 8.3 109 13-124 5-122 (351)
15 COG1088 RfbB dTDP-D-glucose 4, 99.6 1.5E-15 3.2E-20 104.7 6.7 106 14-121 1-117 (340)
16 PLN02206 UDP-glucuronate decar 99.6 4E-15 8.6E-20 109.5 8.9 104 11-120 117-225 (442)
17 PLN02166 dTDP-glucose 4,6-dehy 99.6 7.1E-15 1.5E-19 108.0 9.1 102 13-120 120-226 (436)
18 COG3320 Putative dehydrogenase 99.6 5.2E-15 1.1E-19 105.0 7.3 104 14-119 1-125 (382)
19 PLN02572 UDP-sulfoquinovose sy 99.6 1.3E-14 2.9E-19 106.8 9.7 112 6-120 40-181 (442)
20 PLN02427 UDP-apiose/xylose syn 99.6 3.1E-15 6.7E-20 108.2 6.0 105 11-120 12-128 (386)
21 PLN02214 cinnamoyl-CoA reducta 99.6 8E-15 1.7E-19 104.7 7.9 107 11-124 8-121 (342)
22 PRK09987 dTDP-4-dehydrorhamnos 99.6 2.6E-14 5.6E-19 100.3 9.8 89 14-120 1-96 (299)
23 TIGR01472 gmd GDP-mannose 4,6- 99.6 1.7E-14 3.6E-19 102.8 8.7 103 14-120 1-120 (343)
24 PLN02989 cinnamyl-alcohol dehy 99.6 2.1E-14 4.5E-19 101.6 9.0 110 12-124 4-123 (325)
25 PF02719 Polysacc_synt_2: Poly 99.6 1.7E-15 3.7E-20 105.1 2.7 107 16-125 1-123 (293)
26 PRK08125 bifunctional UDP-gluc 99.5 5.5E-15 1.2E-19 113.4 5.4 105 10-120 312-424 (660)
27 PRK11908 NAD-dependent epimera 99.5 1.4E-14 3.1E-19 103.3 7.1 99 14-120 2-110 (347)
28 PLN02260 probable rhamnose bio 99.5 4.6E-14 1E-18 108.4 10.3 115 9-125 2-127 (668)
29 PLN02778 3,5-epimerase/4-reduc 99.5 5.6E-14 1.2E-18 98.7 9.4 88 13-120 9-102 (298)
30 COG0451 WcaG Nucleoside-diphos 99.5 2.4E-14 5.3E-19 100.2 7.5 100 15-124 2-110 (314)
31 PLN02896 cinnamyl-alcohol dehy 99.5 2.2E-14 4.8E-19 102.6 7.0 108 13-125 10-133 (353)
32 PLN02583 cinnamoyl-CoA reducta 99.5 6.8E-14 1.5E-18 98.1 8.5 109 13-124 6-122 (297)
33 PF04321 RmlD_sub_bind: RmlD s 99.5 6.5E-14 1.4E-18 97.9 8.2 90 14-120 1-93 (286)
34 PLN02653 GDP-mannose 4,6-dehyd 99.5 1E-13 2.3E-18 98.6 8.9 107 11-120 4-125 (340)
35 TIGR03589 PseB UDP-N-acetylglu 99.5 7.4E-14 1.6E-18 99.1 7.2 106 11-120 2-116 (324)
36 PRK10217 dTDP-glucose 4,6-dehy 99.5 1.1E-13 2.4E-18 98.9 7.5 101 14-118 2-114 (355)
37 KOG1429|consensus 99.5 1.4E-14 3.1E-19 99.4 2.8 102 11-120 25-133 (350)
38 KOG1371|consensus 99.5 9.8E-14 2.1E-18 96.7 6.9 107 13-123 2-121 (343)
39 CHL00194 ycf39 Ycf39; Provisio 99.5 5.1E-14 1.1E-18 99.5 5.5 101 14-125 1-105 (317)
40 PRK07201 short chain dehydroge 99.5 9.9E-14 2.1E-18 106.2 7.3 106 14-120 1-116 (657)
41 PLN02695 GDP-D-mannose-3',5'-e 99.5 7E-14 1.5E-18 100.9 6.1 105 12-125 20-132 (370)
42 PLN02686 cinnamoyl-CoA reducta 99.5 6.4E-14 1.4E-18 101.0 5.8 109 11-125 51-175 (367)
43 COG1091 RfbD dTDP-4-dehydrorha 99.4 7E-13 1.5E-17 91.7 8.8 89 14-120 1-92 (281)
44 PRK11150 rfaD ADP-L-glycero-D- 99.4 1.2E-12 2.5E-17 92.1 9.6 100 16-120 2-108 (308)
45 KOG1430|consensus 99.4 2.8E-13 6.1E-18 96.6 6.4 111 12-124 3-120 (361)
46 TIGR01214 rmlD dTDP-4-dehydror 99.4 2E-12 4.4E-17 89.8 10.1 89 15-120 1-92 (287)
47 PRK10084 dTDP-glucose 4,6 dehy 99.4 7.4E-13 1.6E-17 94.6 7.8 102 14-119 1-114 (352)
48 PLN02240 UDP-glucose 4-epimera 99.4 1.7E-12 3.6E-17 92.7 9.2 107 11-120 3-123 (352)
49 TIGR01746 Thioester-redct thio 99.4 9E-13 1.9E-17 93.9 7.8 103 15-120 1-127 (367)
50 PF01370 Epimerase: NAD depend 99.4 6E-13 1.3E-17 89.7 5.9 100 16-121 1-108 (236)
51 PRK12367 short chain dehydroge 99.4 1.9E-12 4E-17 88.8 8.1 103 9-118 10-120 (245)
52 PRK05717 oxidoreductase; Valid 99.4 2E-12 4.3E-17 88.6 7.8 103 11-118 8-130 (255)
53 TIGR03466 HpnA hopanoid-associ 99.4 1.1E-12 2.4E-17 92.5 6.7 99 14-120 1-104 (328)
54 TIGR01777 yfcH conserved hypot 99.4 1E-12 2.2E-17 91.3 6.3 96 16-120 1-101 (292)
55 PRK07523 gluconate 5-dehydroge 99.4 1.6E-12 3.5E-17 89.0 7.2 105 11-118 8-131 (255)
56 TIGR02197 heptose_epim ADP-L-g 99.4 2E-12 4.2E-17 90.8 7.7 100 16-120 1-106 (314)
57 PLN02725 GDP-4-keto-6-deoxyman 99.4 3.3E-12 7.1E-17 89.4 8.3 90 17-124 1-95 (306)
58 PRK10675 UDP-galactose-4-epime 99.4 5.1E-12 1.1E-16 89.7 9.3 104 14-120 1-115 (338)
59 PRK06935 2-deoxy-D-gluconate 3 99.4 2.2E-12 4.7E-17 88.5 7.1 114 1-117 1-134 (258)
60 PLN02260 probable rhamnose bio 99.4 2.9E-12 6.3E-17 98.6 8.4 87 13-120 380-473 (668)
61 PRK06194 hypothetical protein; 99.3 2.5E-12 5.5E-17 89.4 6.7 100 11-115 4-124 (287)
62 PLN03209 translocon at the inn 99.3 4E-12 8.7E-17 95.4 8.1 109 9-120 76-199 (576)
63 PLN02657 3,8-divinyl protochlo 99.3 2.4E-12 5.1E-17 93.6 6.4 108 11-124 58-176 (390)
64 PLN02253 xanthoxin dehydrogena 99.3 2.6E-12 5.6E-17 89.1 6.4 102 11-117 16-139 (280)
65 COG1090 Predicted nucleoside-d 99.3 9.6E-12 2.1E-16 85.3 8.9 94 16-119 1-99 (297)
66 PRK13394 3-hydroxybutyrate deh 99.3 4.1E-12 8.8E-17 87.1 7.1 103 11-116 5-130 (262)
67 PRK06500 short chain dehydroge 99.3 5.9E-12 1.3E-16 85.7 7.7 103 11-118 4-124 (249)
68 PRK06398 aldose dehydrogenase; 99.3 7.8E-12 1.7E-16 86.0 8.2 98 11-117 4-115 (258)
69 PRK05876 short chain dehydroge 99.3 3.9E-12 8.5E-17 88.4 6.7 102 11-117 4-126 (275)
70 PRK08226 short chain dehydroge 99.3 5E-12 1.1E-16 86.8 7.0 105 11-118 4-126 (263)
71 TIGR01832 kduD 2-deoxy-D-gluco 99.3 5.9E-12 1.3E-16 85.8 7.2 103 11-117 3-123 (248)
72 KOG1205|consensus 99.3 5.1E-12 1.1E-16 87.6 6.8 106 9-117 8-134 (282)
73 PRK07890 short chain dehydroge 99.3 5.7E-12 1.2E-16 86.2 7.1 104 10-118 2-127 (258)
74 COG4221 Short-chain alcohol de 99.3 9.2E-12 2E-16 84.1 7.8 101 11-116 4-123 (246)
75 PRK09135 pteridine reductase; 99.3 1.3E-11 2.9E-16 83.8 8.8 104 12-118 5-129 (249)
76 PRK12823 benD 1,6-dihydroxycyc 99.3 5.4E-12 1.2E-16 86.6 6.8 105 10-117 5-128 (260)
77 PRK07067 sorbitol dehydrogenas 99.3 8.5E-12 1.8E-16 85.5 7.6 103 11-118 4-124 (257)
78 PRK06180 short chain dehydroge 99.3 9.8E-12 2.1E-16 86.3 7.9 99 12-116 3-120 (277)
79 PRK07774 short chain dehydroge 99.3 6.9E-12 1.5E-16 85.4 6.9 105 11-118 4-130 (250)
80 PRK12481 2-deoxy-D-gluconate 3 99.3 4.6E-12 1E-16 86.8 6.0 103 11-117 6-126 (251)
81 PRK05867 short chain dehydroge 99.3 5.2E-12 1.1E-16 86.4 6.2 104 11-117 7-129 (253)
82 TIGR01181 dTDP_gluc_dehyt dTDP 99.3 1E-11 2.3E-16 87.0 7.8 103 15-119 1-114 (317)
83 PRK08278 short chain dehydroge 99.3 9.9E-12 2.1E-16 86.2 7.6 105 11-118 4-134 (273)
84 PRK07063 short chain dehydroge 99.3 1.5E-11 3.2E-16 84.5 8.4 102 11-117 5-129 (260)
85 PRK08589 short chain dehydroge 99.3 6.4E-12 1.4E-16 87.0 6.6 103 11-117 4-126 (272)
86 PRK08265 short chain dehydroge 99.3 1.5E-11 3.3E-16 84.6 8.3 103 11-118 4-123 (261)
87 PRK06841 short chain dehydroge 99.3 6E-12 1.3E-16 86.0 6.2 102 11-118 13-133 (255)
88 PRK08628 short chain dehydroge 99.3 1.1E-11 2.3E-16 85.0 7.3 105 11-118 5-126 (258)
89 PRK06114 short chain dehydroge 99.3 1.1E-11 2.3E-16 85.0 7.3 104 11-117 6-129 (254)
90 PRK06128 oxidoreductase; Provi 99.3 1.8E-11 4E-16 85.9 8.7 104 11-118 53-179 (300)
91 PRK12745 3-ketoacyl-(acyl-carr 99.3 1E-11 2.2E-16 84.9 7.0 102 13-118 2-126 (256)
92 PRK08213 gluconate 5-dehydroge 99.3 9.2E-12 2E-16 85.4 6.6 105 11-118 10-133 (259)
93 PRK06482 short chain dehydroge 99.3 1.3E-11 2.9E-16 85.4 7.4 97 14-116 3-118 (276)
94 PRK06196 oxidoreductase; Provi 99.3 1.8E-11 3.9E-16 86.5 8.0 100 11-116 24-139 (315)
95 COG0300 DltE Short-chain dehyd 99.3 2.2E-11 4.8E-16 83.8 8.1 103 11-116 4-126 (265)
96 PRK08263 short chain dehydroge 99.3 1.8E-11 3.8E-16 84.9 7.8 99 12-116 2-119 (275)
97 PRK07231 fabG 3-ketoacyl-(acyl 99.3 2.1E-11 4.5E-16 83.0 8.0 103 11-118 3-126 (251)
98 PRK12826 3-ketoacyl-(acyl-carr 99.3 1.3E-11 2.7E-16 84.0 6.8 104 11-117 4-126 (251)
99 PRK07424 bifunctional sterol d 99.3 2E-11 4.4E-16 89.0 8.0 102 11-117 176-285 (406)
100 PRK07453 protochlorophyllide o 99.3 9.5E-12 2.1E-16 88.1 6.1 103 11-118 4-128 (322)
101 PRK07856 short chain dehydroge 99.3 2.2E-11 4.8E-16 83.3 7.6 103 11-118 4-119 (252)
102 TIGR03206 benzo_BadH 2-hydroxy 99.3 1.5E-11 3.2E-16 83.8 6.6 104 11-117 1-123 (250)
103 TIGR03325 BphB_TodD cis-2,3-di 99.3 1.4E-11 3E-16 84.8 6.5 102 11-118 3-128 (262)
104 PRK06179 short chain dehydroge 99.3 1.1E-11 2.5E-16 85.4 5.9 95 12-116 3-115 (270)
105 PRK07478 short chain dehydroge 99.3 2E-11 4.3E-16 83.6 7.0 103 11-116 4-126 (254)
106 PRK07814 short chain dehydroge 99.3 1.5E-11 3.3E-16 84.6 6.5 105 11-118 8-131 (263)
107 PRK07806 short chain dehydroge 99.3 5.9E-12 1.3E-16 85.7 4.3 105 11-118 4-122 (248)
108 PRK08643 acetoin reductase; Va 99.3 2.1E-11 4.6E-16 83.4 7.1 103 13-118 2-123 (256)
109 PRK08993 2-deoxy-D-gluconate 3 99.3 2.7E-11 5.8E-16 83.0 7.5 103 11-117 8-128 (253)
110 PRK06138 short chain dehydroge 99.3 1.8E-11 3.8E-16 83.5 6.5 101 11-116 3-123 (252)
111 PRK08085 gluconate 5-dehydroge 99.3 2.2E-11 4.8E-16 83.3 7.0 103 11-118 7-130 (254)
112 PRK12429 3-hydroxybutyrate deh 99.3 1.7E-11 3.7E-16 83.7 6.4 104 11-117 2-124 (258)
113 PRK06200 2,3-dihydroxy-2,3-dih 99.2 1.8E-11 4E-16 84.2 6.5 102 11-118 4-129 (263)
114 PRK12939 short chain dehydroge 99.2 2.6E-11 5.6E-16 82.5 7.1 105 11-118 5-128 (250)
115 PRK06057 short chain dehydroge 99.2 3.6E-11 7.7E-16 82.4 7.7 100 11-117 5-124 (255)
116 PRK07792 fabG 3-ketoacyl-(acyl 99.2 4.5E-11 9.8E-16 84.2 8.2 106 9-117 8-132 (306)
117 PRK05557 fabG 3-ketoacyl-(acyl 99.2 3.5E-11 7.7E-16 81.5 7.4 104 11-118 3-127 (248)
118 PRK06139 short chain dehydroge 99.2 1.9E-11 4.2E-16 87.1 6.4 103 11-116 5-126 (330)
119 PRK12829 short chain dehydroge 99.2 8.8E-11 1.9E-15 80.5 9.3 103 9-117 7-130 (264)
120 PRK07576 short chain dehydroge 99.2 3.4E-11 7.3E-16 83.1 7.3 106 10-118 6-130 (264)
121 PRK05872 short chain dehydroge 99.2 4.6E-11 9.9E-16 83.8 8.0 102 11-117 7-128 (296)
122 PRK07791 short chain dehydroge 99.2 2.6E-11 5.6E-16 84.7 6.7 105 10-117 3-135 (286)
123 PRK12936 3-ketoacyl-(acyl-carr 99.2 4.2E-11 9E-16 81.2 7.5 102 11-117 4-123 (245)
124 PRK09072 short chain dehydroge 99.2 2.6E-11 5.7E-16 83.4 6.5 102 12-118 4-124 (263)
125 PRK05693 short chain dehydroge 99.2 4.5E-11 9.9E-16 82.7 7.8 97 13-117 1-115 (274)
126 PRK06701 short chain dehydroge 99.2 4.8E-11 1E-15 83.5 7.9 104 10-118 43-169 (290)
127 PRK06124 gluconate 5-dehydroge 99.2 4.3E-11 9.3E-16 81.9 7.5 104 11-117 9-131 (256)
128 PRK07060 short chain dehydroge 99.2 5.1E-11 1.1E-15 80.8 7.8 101 11-118 7-121 (245)
129 PRK08267 short chain dehydroge 99.2 2.8E-11 6E-16 83.1 6.5 99 13-117 1-120 (260)
130 PRK09134 short chain dehydroge 99.2 5.1E-11 1.1E-15 81.7 7.8 104 12-118 8-131 (258)
131 PRK12747 short chain dehydroge 99.2 2.4E-10 5.2E-15 78.1 11.1 105 11-118 2-132 (252)
132 PRK07825 short chain dehydroge 99.2 7.8E-11 1.7E-15 81.4 8.6 100 12-117 4-121 (273)
133 PRK06182 short chain dehydroge 99.2 6E-11 1.3E-15 82.0 8.0 96 12-115 2-115 (273)
134 PRK05653 fabG 3-ketoacyl-(acyl 99.2 5E-11 1.1E-15 80.7 7.4 103 12-117 4-125 (246)
135 PRK06463 fabG 3-ketoacyl-(acyl 99.2 7.6E-11 1.6E-15 80.8 8.3 99 11-116 5-121 (255)
136 PRK12827 short chain dehydroge 99.2 8.6E-11 1.9E-15 79.8 8.5 104 11-117 4-130 (249)
137 PRK12742 oxidoreductase; Provi 99.2 9.8E-11 2.1E-15 79.2 8.7 101 11-117 4-118 (237)
138 PRK06523 short chain dehydroge 99.2 1.9E-10 4.1E-15 78.9 10.2 100 11-116 7-121 (260)
139 PRK05854 short chain dehydroge 99.2 4.9E-11 1.1E-15 84.3 7.4 104 11-117 12-135 (313)
140 PRK07985 oxidoreductase; Provi 99.2 1.3E-10 2.8E-15 81.5 9.4 104 11-118 47-173 (294)
141 PRK12320 hypothetical protein; 99.2 3.1E-11 6.7E-16 92.8 6.6 91 14-120 1-94 (699)
142 PRK06483 dihydromonapterin red 99.2 8.8E-11 1.9E-15 79.5 8.1 99 13-118 2-118 (236)
143 PRK07666 fabG 3-ketoacyl-(acyl 99.2 5E-11 1.1E-15 80.8 6.9 104 11-117 5-127 (239)
144 PRK12828 short chain dehydroge 99.2 6.1E-11 1.3E-15 80.0 7.3 102 11-117 5-125 (239)
145 PRK07533 enoyl-(acyl carrier p 99.2 9.1E-11 2E-15 80.7 8.2 104 11-117 8-135 (258)
146 PRK06197 short chain dehydroge 99.2 4.5E-11 9.8E-16 84.1 6.8 101 11-114 14-133 (306)
147 TIGR03443 alpha_am_amid L-amin 99.2 1E-10 2.2E-15 96.0 9.6 108 13-120 971-1100(1389)
148 PRK08063 enoyl-(acyl carrier p 99.2 4.5E-11 9.7E-16 81.4 6.4 105 11-118 2-126 (250)
149 PRK07677 short chain dehydroge 99.2 5.8E-11 1.2E-15 81.2 6.9 102 13-117 1-121 (252)
150 PRK08339 short chain dehydroge 99.2 8.1E-11 1.8E-15 81.2 7.6 104 11-117 6-128 (263)
151 PRK08277 D-mannonate oxidoredu 99.2 6.1E-11 1.3E-15 82.2 6.9 103 11-116 8-144 (278)
152 PRK12937 short chain dehydroge 99.2 5.8E-11 1.3E-15 80.6 6.7 105 11-118 3-127 (245)
153 PRK12746 short chain dehydroge 99.2 4.3E-11 9.3E-16 81.8 6.1 103 11-118 4-134 (254)
154 PRK06101 short chain dehydroge 99.2 1.1E-10 2.4E-15 79.4 8.0 99 14-118 2-115 (240)
155 PRK07109 short chain dehydroge 99.2 6.1E-11 1.3E-15 84.6 6.9 103 11-116 6-127 (334)
156 PRK08220 2,3-dihydroxybenzoate 99.2 9.8E-11 2.1E-15 79.8 7.7 101 11-117 6-119 (252)
157 PRK07062 short chain dehydroge 99.2 1.5E-10 3.2E-15 79.7 8.6 103 11-116 6-129 (265)
158 PRK06171 sorbitol-6-phosphate 99.2 2.8E-10 6.1E-15 78.3 10.0 102 11-118 7-130 (266)
159 PRK12384 sorbitol-6-phosphate 99.2 1.2E-10 2.6E-15 79.8 8.0 103 13-118 2-125 (259)
160 PRK06113 7-alpha-hydroxysteroi 99.2 7.2E-11 1.6E-15 80.9 6.9 104 11-117 9-130 (255)
161 PRK07035 short chain dehydroge 99.2 6.7E-11 1.4E-15 80.8 6.7 103 11-116 6-128 (252)
162 PRK06172 short chain dehydroge 99.2 7.9E-11 1.7E-15 80.5 7.0 103 11-116 5-127 (253)
163 PRK06505 enoyl-(acyl carrier p 99.2 9.6E-11 2.1E-15 81.3 7.4 104 11-117 5-132 (271)
164 PRK08264 short chain dehydroge 99.2 8.3E-11 1.8E-15 79.6 7.0 98 11-117 4-117 (238)
165 PRK08703 short chain dehydroge 99.2 2.7E-10 5.8E-15 77.3 9.5 103 11-118 4-132 (239)
166 PRK05866 short chain dehydroge 99.2 6.8E-11 1.5E-15 82.9 6.6 103 11-116 38-161 (293)
167 PRK10538 malonic semialdehyde 99.2 1.1E-10 2.5E-15 79.6 7.6 98 14-117 1-118 (248)
168 PRK07454 short chain dehydroge 99.2 5.6E-11 1.2E-15 80.7 6.0 103 12-117 5-126 (241)
169 PRK06914 short chain dehydroge 99.2 9.2E-11 2E-15 81.3 7.1 102 12-116 2-123 (280)
170 PRK07577 short chain dehydroge 99.2 5.9E-10 1.3E-14 75.2 10.8 99 12-117 2-111 (234)
171 PRK08159 enoyl-(acyl carrier p 99.2 1.3E-10 2.9E-15 80.6 7.9 104 9-118 6-136 (272)
172 PRK08945 putative oxoacyl-(acy 99.2 1.9E-10 4.1E-15 78.4 8.3 108 7-117 6-136 (247)
173 PRK12825 fabG 3-ketoacyl-(acyl 99.2 1.2E-10 2.6E-15 78.9 7.3 103 11-116 4-126 (249)
174 PRK05993 short chain dehydroge 99.2 1.7E-10 3.7E-15 80.1 8.2 99 13-119 4-125 (277)
175 PRK07102 short chain dehydroge 99.2 1.6E-10 3.6E-15 78.5 8.0 103 13-118 1-120 (243)
176 PRK12935 acetoacetyl-CoA reduc 99.2 1.3E-10 2.7E-15 79.2 7.3 104 11-118 4-128 (247)
177 PRK12744 short chain dehydroge 99.2 2.2E-10 4.9E-15 78.5 8.6 105 11-118 6-133 (257)
178 PRK07889 enoyl-(acyl carrier p 99.2 2.1E-10 4.6E-15 78.9 8.4 103 11-117 5-132 (256)
179 TIGR01179 galE UDP-glucose-4-e 99.2 1E-10 2.2E-15 82.3 6.9 102 15-120 1-112 (328)
180 PRK08415 enoyl-(acyl carrier p 99.2 1.2E-10 2.6E-15 81.0 7.1 104 11-117 3-130 (274)
181 PRK08177 short chain dehydroge 99.2 7.1E-11 1.5E-15 79.5 5.8 99 13-118 1-117 (225)
182 PRK07097 gluconate 5-dehydroge 99.2 1.4E-10 3.1E-15 79.8 7.4 104 11-117 8-130 (265)
183 PRK09242 tropinone reductase; 99.2 1.1E-10 2.4E-15 80.0 6.8 104 11-117 7-131 (257)
184 PRK05865 hypothetical protein; 99.2 8E-11 1.7E-15 92.2 6.8 90 14-120 1-94 (854)
185 TIGR01963 PHB_DH 3-hydroxybuty 99.2 1E-10 2.3E-15 79.7 6.5 99 13-117 1-121 (255)
186 PRK09291 short chain dehydroge 99.2 1E-10 2.2E-15 80.0 6.4 98 13-116 2-115 (257)
187 PRK12743 oxidoreductase; Provi 99.2 1.7E-10 3.8E-15 79.1 7.6 103 13-118 2-124 (256)
188 KOG1200|consensus 99.2 1.9E-10 4.2E-15 75.5 7.3 105 9-118 10-134 (256)
189 PRK09186 flagellin modificatio 99.2 2.6E-10 5.6E-15 77.9 8.4 104 11-117 2-129 (256)
190 PRK07023 short chain dehydroge 99.2 2.5E-10 5.5E-15 77.6 8.3 102 13-118 1-122 (243)
191 PRK06181 short chain dehydroge 99.2 1E-10 2.2E-15 80.4 6.4 100 13-117 1-122 (263)
192 PRK07024 short chain dehydroge 99.2 1.4E-10 3.1E-15 79.5 7.1 97 13-115 2-120 (257)
193 PRK07326 short chain dehydroge 99.2 1.8E-10 4E-15 77.8 7.6 102 12-118 5-126 (237)
194 PRK07775 short chain dehydroge 99.2 1.1E-10 2.3E-15 81.0 6.5 104 11-117 8-130 (274)
195 PRK05875 short chain dehydroge 99.2 2E-10 4.3E-15 79.5 7.8 105 11-118 5-131 (276)
196 TIGR02415 23BDH acetoin reduct 99.2 1.2E-10 2.5E-15 79.6 6.6 101 14-117 1-120 (254)
197 PRK06940 short chain dehydroge 99.2 9.9E-11 2.1E-15 81.3 6.3 101 13-118 2-113 (275)
198 PRK08261 fabG 3-ketoacyl-(acyl 99.1 1.7E-10 3.6E-15 85.2 7.8 103 11-118 208-328 (450)
199 PRK12748 3-ketoacyl-(acyl-carr 99.1 1.5E-10 3.3E-15 79.3 7.1 105 11-118 3-139 (256)
200 KOG0747|consensus 99.1 1.9E-11 4.1E-16 84.1 2.5 113 11-125 4-127 (331)
201 PRK12938 acetyacetyl-CoA reduc 99.1 1.2E-10 2.7E-15 79.1 6.5 102 12-117 2-124 (246)
202 PRK06949 short chain dehydroge 99.1 9.9E-11 2.1E-15 80.1 5.8 104 11-117 7-129 (258)
203 PRK06079 enoyl-(acyl carrier p 99.1 8.9E-11 1.9E-15 80.5 5.4 103 10-118 4-131 (252)
204 KOG1201|consensus 99.1 3.7E-10 8E-15 78.3 8.2 101 11-115 36-155 (300)
205 PRK06484 short chain dehydroge 99.1 2.2E-10 4.7E-15 85.8 7.5 103 11-118 267-388 (520)
206 PRK08690 enoyl-(acyl carrier p 99.1 2.1E-10 4.5E-15 79.1 6.9 101 11-117 4-132 (261)
207 PRK06997 enoyl-(acyl carrier p 99.1 3.3E-10 7.1E-15 78.1 7.8 105 10-117 3-132 (260)
208 PRK08936 glucose-1-dehydrogena 99.1 2.6E-10 5.6E-15 78.4 7.3 101 11-115 5-126 (261)
209 PRK06077 fabG 3-ketoacyl-(acyl 99.1 2.5E-10 5.4E-15 77.8 7.2 103 12-118 5-128 (252)
210 PRK06953 short chain dehydroge 99.1 3.5E-10 7.6E-15 76.0 7.8 98 13-118 1-116 (222)
211 PRK05884 short chain dehydroge 99.1 2.9E-10 6.3E-15 76.7 7.3 98 14-118 1-118 (223)
212 PRK05565 fabG 3-ketoacyl-(acyl 99.1 2.4E-10 5.2E-15 77.5 6.9 104 11-117 3-126 (247)
213 PF00106 adh_short: short chai 99.1 1.2E-10 2.7E-15 74.8 5.1 103 14-118 1-124 (167)
214 PRK07984 enoyl-(acyl carrier p 99.1 3.4E-10 7.5E-15 78.2 7.4 102 11-118 4-133 (262)
215 PRK05650 short chain dehydroge 99.1 2.3E-10 5E-15 79.0 6.5 100 14-116 1-119 (270)
216 PRK05855 short chain dehydroge 99.1 2.2E-10 4.8E-15 86.3 6.6 103 11-116 313-434 (582)
217 PRK07832 short chain dehydroge 99.1 6.8E-10 1.5E-14 76.8 8.5 101 14-117 1-121 (272)
218 COG3967 DltE Short-chain dehyd 99.1 3.1E-10 6.7E-15 75.1 6.3 101 11-116 3-122 (245)
219 PRK07370 enoyl-(acyl carrier p 99.1 6.7E-10 1.4E-14 76.5 8.3 104 11-117 4-134 (258)
220 PRK06550 fabG 3-ketoacyl-(acyl 99.1 2.9E-10 6.3E-15 76.8 6.3 98 11-117 3-111 (235)
221 PRK06198 short chain dehydroge 99.1 3.1E-10 6.7E-15 77.8 6.5 105 11-118 4-128 (260)
222 PRK08642 fabG 3-ketoacyl-(acyl 99.1 4.9E-10 1.1E-14 76.4 7.3 102 11-117 3-130 (253)
223 PRK08217 fabG 3-ketoacyl-(acyl 99.1 3.7E-10 8.1E-15 76.8 6.5 103 11-116 3-133 (253)
224 PRK08251 short chain dehydroge 99.1 4.5E-10 9.8E-15 76.5 6.8 102 13-117 2-124 (248)
225 PRK06123 short chain dehydroge 99.1 4.5E-10 9.8E-15 76.4 6.8 102 13-118 2-125 (248)
226 PRK06603 enoyl-(acyl carrier p 99.1 6E-10 1.3E-14 76.8 7.3 102 10-117 5-133 (260)
227 PRK12824 acetoacetyl-CoA reduc 99.1 9E-10 1.9E-14 74.7 7.9 99 14-116 3-122 (245)
228 PRK06484 short chain dehydroge 99.1 7.2E-10 1.6E-14 83.0 8.0 102 12-118 4-125 (520)
229 PRK06125 short chain dehydroge 99.1 1.1E-09 2.4E-14 75.2 8.1 103 11-116 5-123 (259)
230 PRK07831 short chain dehydroge 99.1 1.5E-09 3.2E-14 74.6 8.7 105 10-117 14-140 (262)
231 PRK07578 short chain dehydroge 99.0 4.7E-09 1E-13 69.4 10.6 88 14-118 1-99 (199)
232 PRK07074 short chain dehydroge 99.0 1.3E-09 2.7E-14 74.7 8.1 100 13-117 2-120 (257)
233 PRK08594 enoyl-(acyl carrier p 99.0 2.4E-09 5.1E-14 73.8 8.8 105 11-118 5-135 (257)
234 PRK08303 short chain dehydroge 99.0 1.2E-09 2.6E-14 77.1 7.4 104 11-117 6-143 (305)
235 PRK12859 3-ketoacyl-(acyl-carr 99.0 2.3E-09 5E-14 73.6 8.5 104 10-116 3-138 (256)
236 PRK06947 glucose-1-dehydrogena 99.0 1.2E-09 2.6E-14 74.4 6.9 100 13-115 2-122 (248)
237 PRK07201 short chain dehydroge 99.0 8.2E-10 1.8E-14 84.8 6.6 103 11-116 369-492 (657)
238 PLN02780 ketoreductase/ oxidor 99.0 2.9E-09 6.3E-14 75.7 8.9 102 12-117 52-177 (320)
239 PRK08324 short chain dehydroge 99.0 1.5E-09 3.2E-14 84.0 8.0 102 11-117 420-541 (681)
240 PRK08219 short chain dehydroge 99.0 2.9E-09 6.3E-14 71.4 8.4 97 13-116 3-113 (227)
241 TIGR01829 AcAcCoA_reduct aceto 99.0 1E-09 2.2E-14 74.3 6.3 99 14-116 1-120 (242)
242 TIGR01289 LPOR light-dependent 99.0 7.1E-10 1.5E-14 78.5 5.7 99 13-116 3-124 (314)
243 PLN00141 Tic62-NAD(P)-related 99.0 1.1E-09 2.5E-14 75.0 6.6 103 11-120 15-123 (251)
244 PRK09730 putative NAD(P)-bindi 99.0 1.1E-09 2.3E-14 74.4 6.3 98 14-116 2-122 (247)
245 smart00822 PKS_KR This enzymat 99.0 3.2E-09 6.9E-14 68.1 8.1 103 14-119 1-126 (180)
246 PRK08416 7-alpha-hydroxysteroi 99.0 2.8E-09 6E-14 73.3 8.1 103 10-116 5-135 (260)
247 PRK08340 glucose-1-dehydrogena 99.0 1.2E-09 2.6E-14 75.1 6.2 98 14-115 1-119 (259)
248 PF13460 NAD_binding_10: NADH( 99.0 1E-09 2.3E-14 71.6 5.5 88 16-124 1-92 (183)
249 PRK07069 short chain dehydroge 99.0 4.9E-09 1.1E-13 71.4 8.7 100 15-118 1-127 (251)
250 TIGR01830 3oxo_ACP_reduc 3-oxo 99.0 2.3E-09 5E-14 72.3 6.9 100 16-118 1-120 (239)
251 TIGR02632 RhaD_aldol-ADH rhamn 99.0 2.7E-09 5.9E-14 82.5 8.1 103 11-116 412-535 (676)
252 TIGR02685 pter_reduc_Leis pter 99.0 6.1E-09 1.3E-13 71.9 9.0 100 14-117 2-138 (267)
253 PRK07904 short chain dehydroge 99.0 3.9E-09 8.5E-14 72.5 7.7 105 12-118 7-135 (253)
254 PRK05786 fabG 3-ketoacyl-(acyl 98.9 2.7E-09 5.9E-14 72.1 6.6 102 11-118 3-123 (238)
255 KOG0725|consensus 98.9 6.2E-09 1.3E-13 72.4 8.4 104 9-118 4-135 (270)
256 TIGR01831 fabG_rel 3-oxoacyl-( 98.9 2.7E-09 5.8E-14 72.3 6.4 98 16-116 1-118 (239)
257 PRK08017 oxidoreductase; Provi 98.9 3.1E-09 6.8E-14 72.6 6.7 93 14-114 3-114 (256)
258 PRK08862 short chain dehydroge 98.9 4.7E-09 1E-13 71.2 7.0 102 11-116 3-126 (227)
259 PLN00016 RNA-binding protein; 98.9 4.1E-09 8.9E-14 76.3 7.0 96 13-125 52-160 (378)
260 COG1089 Gmd GDP-D-mannose dehy 98.9 6.3E-10 1.4E-14 76.9 2.5 105 13-120 2-120 (345)
261 PRK06924 short chain dehydroge 98.9 4.2E-09 9E-14 71.8 6.2 99 14-117 2-124 (251)
262 PRK09009 C factor cell-cell si 98.9 4.1E-09 8.9E-14 71.3 6.0 97 14-118 1-117 (235)
263 PRK07041 short chain dehydroge 98.9 2.7E-09 5.9E-14 71.9 4.9 96 17-117 1-112 (230)
264 PLN02730 enoyl-[acyl-carrier-p 98.9 3.3E-08 7.2E-13 69.8 9.4 35 11-49 7-43 (303)
265 KOG1208|consensus 98.8 7.3E-09 1.6E-13 73.4 5.8 101 11-115 33-153 (314)
266 PLN00015 protochlorophyllide r 98.8 6.8E-09 1.5E-13 73.2 4.5 96 17-117 1-119 (308)
267 KOG4169|consensus 98.8 5.1E-09 1.1E-13 70.3 3.5 97 11-111 3-112 (261)
268 COG1028 FabG Dehydrogenases wi 98.8 5.6E-08 1.2E-12 66.3 8.7 103 11-117 3-130 (251)
269 KOG1207|consensus 98.8 9.3E-10 2E-14 71.3 -0.5 102 9-116 3-119 (245)
270 KOG2865|consensus 98.8 1.2E-08 2.7E-13 70.8 4.7 109 11-125 59-172 (391)
271 TIGR01500 sepiapter_red sepiap 98.8 3.7E-08 8E-13 67.6 7.1 103 15-117 2-133 (256)
272 PRK05599 hypothetical protein; 98.7 3.5E-08 7.5E-13 67.5 6.7 99 14-116 1-119 (246)
273 TIGR03649 ergot_EASG ergot alk 98.7 3.6E-08 7.8E-13 68.6 6.5 35 15-52 1-35 (285)
274 PRK09620 hypothetical protein; 98.7 7.9E-08 1.7E-12 65.4 7.6 36 11-49 1-52 (229)
275 PRK06720 hypothetical protein; 98.7 3.3E-08 7.1E-13 64.3 5.5 38 11-51 14-51 (169)
276 PRK06300 enoyl-(acyl carrier p 98.7 1.8E-07 4E-12 66.0 9.5 36 10-48 5-42 (299)
277 PF08659 KR: KR domain; Inter 98.7 1.2E-07 2.7E-12 62.1 7.7 102 15-118 2-125 (181)
278 KOG1431|consensus 98.7 9.7E-08 2.1E-12 64.4 6.8 93 14-120 2-98 (315)
279 PF05368 NmrA: NmrA-like famil 98.6 4.1E-08 8.9E-13 66.5 4.2 94 16-125 1-98 (233)
280 KOG1610|consensus 98.6 3.6E-07 7.8E-12 64.1 8.1 101 11-117 27-150 (322)
281 cd01336 MDH_cytoplasmic_cytoso 98.6 4.1E-07 8.8E-12 64.9 8.2 106 14-119 3-117 (325)
282 TIGR02813 omega_3_PfaA polyket 98.6 9.4E-07 2E-11 76.3 11.1 37 11-49 1995-2031(2582)
283 KOG1209|consensus 98.5 1.9E-07 4.2E-12 62.5 5.2 97 13-117 7-124 (289)
284 PTZ00325 malate dehydrogenase; 98.5 1.1E-06 2.4E-11 62.6 9.0 109 8-120 3-116 (321)
285 KOG1199|consensus 98.5 5.3E-08 1.1E-12 63.2 1.9 98 11-115 7-130 (260)
286 KOG1611|consensus 98.5 3.5E-07 7.6E-12 61.5 5.7 97 13-115 3-126 (249)
287 KOG1210|consensus 98.5 1E-06 2.3E-11 61.8 8.0 101 14-117 34-155 (331)
288 KOG1203|consensus 98.4 5.3E-07 1.2E-11 65.7 5.5 109 11-125 77-196 (411)
289 KOG1014|consensus 98.4 5.3E-07 1.1E-11 63.2 5.0 100 13-116 49-170 (312)
290 KOG1372|consensus 98.3 8.3E-07 1.8E-11 60.8 4.4 104 13-120 28-148 (376)
291 PRK06732 phosphopantothenate-- 98.3 9.7E-06 2.1E-10 55.2 9.1 31 17-50 19-50 (229)
292 PLN00106 malate dehydrogenase 98.3 7.5E-06 1.6E-10 58.4 8.7 104 13-120 18-126 (323)
293 COG0702 Predicted nucleoside-d 98.3 1.1E-06 2.5E-11 60.3 4.0 36 14-52 1-36 (275)
294 PRK14982 acyl-ACP reductase; P 98.2 4.5E-06 9.7E-11 59.8 6.9 40 11-51 153-192 (340)
295 PRK05579 bifunctional phosphop 98.2 9.1E-07 2E-11 64.7 3.4 37 11-50 186-238 (399)
296 PRK05086 malate dehydrogenase; 98.1 3.6E-05 7.8E-10 54.7 9.4 103 14-119 1-108 (312)
297 PF13561 adh_short_C2: Enoyl-( 98.1 1.9E-05 4E-10 53.7 6.7 91 20-118 1-121 (241)
298 COG2910 Putative NADH-flavin r 97.9 4.5E-05 9.7E-10 50.1 6.3 37 14-53 1-37 (211)
299 PRK13656 trans-2-enoyl-CoA red 97.8 4.4E-05 9.6E-10 55.6 5.3 34 12-49 40-75 (398)
300 cd00704 MDH Malate dehydrogena 97.8 0.00013 2.8E-09 52.2 7.5 102 15-119 2-115 (323)
301 KOG2774|consensus 97.8 2E-05 4.4E-10 53.8 3.0 104 13-125 44-155 (366)
302 PF04127 DFP: DNA / pantothena 97.8 0.00019 4E-09 47.5 7.5 78 11-95 1-96 (185)
303 TIGR01758 MDH_euk_cyt malate d 97.8 0.00015 3.3E-09 51.9 7.4 105 15-119 1-114 (324)
304 KOG1204|consensus 97.8 1.2E-05 2.6E-10 54.3 1.5 102 12-117 5-128 (253)
305 TIGR02114 coaB_strep phosphopa 97.7 6.1E-05 1.3E-09 51.3 4.2 29 17-48 18-47 (227)
306 PF00056 Ldh_1_N: lactate/mala 97.7 0.00052 1.1E-08 43.3 8.0 104 14-119 1-108 (141)
307 PRK08309 short chain dehydroge 97.7 8E-05 1.7E-09 48.8 4.2 34 14-51 1-34 (177)
308 KOG1478|consensus 97.7 0.00034 7.4E-09 48.3 7.3 39 13-51 3-43 (341)
309 TIGR00521 coaBC_dfp phosphopan 97.6 4E-05 8.7E-10 56.1 2.9 37 11-50 183-235 (390)
310 KOG4039|consensus 97.6 0.00011 2.4E-09 48.2 3.8 104 11-119 16-121 (238)
311 cd01078 NAD_bind_H4MPT_DH NADP 97.5 0.00024 5.2E-09 47.0 4.7 38 11-51 26-63 (194)
312 COG1748 LYS9 Saccharopine dehy 97.4 0.00025 5.5E-09 51.7 4.3 36 13-51 1-36 (389)
313 PF01118 Semialdhyde_dh: Semia 97.3 0.00064 1.4E-08 41.7 5.0 35 15-50 1-35 (121)
314 TIGR01759 MalateDH-SF1 malate 97.2 0.008 1.7E-07 43.1 10.5 102 14-119 4-118 (323)
315 COG0623 FabI Enoyl-[acyl-carri 97.2 0.0074 1.6E-07 41.2 8.9 38 10-50 3-42 (259)
316 PRK12428 3-alpha-hydroxysteroi 97.1 0.0011 2.4E-08 45.1 5.1 80 29-118 1-84 (241)
317 cd01338 MDH_choloroplast_like 97.1 0.0072 1.6E-07 43.3 9.1 103 13-119 2-117 (322)
318 cd05294 LDH-like_MDH_nadp A la 97.1 0.0067 1.4E-07 43.2 8.6 103 14-118 1-110 (309)
319 PRK00066 ldh L-lactate dehydro 97.0 0.013 2.7E-07 42.0 9.6 102 13-118 6-111 (315)
320 cd01337 MDH_glyoxysomal_mitoch 97.0 0.0091 2E-07 42.6 8.8 103 14-119 1-107 (310)
321 PF03435 Saccharop_dh: Sacchar 96.9 0.00098 2.1E-08 48.6 3.3 34 16-51 1-34 (386)
322 PRK13982 bifunctional SbtC-lik 96.9 0.00088 1.9E-08 50.2 3.0 78 11-95 254-348 (475)
323 cd05291 HicDH_like L-2-hydroxy 96.9 0.015 3.3E-07 41.3 9.1 102 14-119 1-107 (306)
324 TIGR00715 precor6x_red precorr 96.9 0.0015 3.3E-08 45.3 3.8 34 14-51 1-34 (256)
325 PF01488 Shikimate_DH: Shikima 96.8 0.0022 4.7E-08 40.2 4.1 39 10-51 9-47 (135)
326 PRK12548 shikimate 5-dehydroge 96.8 0.0025 5.4E-08 44.9 4.4 36 11-50 124-160 (289)
327 TIGR01915 npdG NADPH-dependent 96.7 0.003 6.5E-08 42.6 4.4 35 14-51 1-35 (219)
328 PRK14874 aspartate-semialdehyd 96.7 0.0038 8.3E-08 44.9 5.1 38 13-50 1-38 (334)
329 cd05295 MDH_like Malate dehydr 96.7 0.018 3.9E-07 43.1 8.4 108 13-120 123-239 (452)
330 PRK02472 murD UDP-N-acetylmura 96.7 0.0095 2.1E-07 44.2 7.0 37 11-51 3-39 (447)
331 PRK05442 malate dehydrogenase; 96.6 0.03 6.5E-07 40.3 9.1 103 12-118 3-118 (326)
332 KOG2733|consensus 96.6 0.0017 3.7E-08 46.9 2.6 79 15-95 7-97 (423)
333 cd01080 NAD_bind_m-THF_DH_Cycl 96.6 0.013 2.8E-07 38.2 6.4 37 11-50 42-78 (168)
334 PRK00436 argC N-acetyl-gamma-g 96.6 0.0069 1.5E-07 43.8 5.6 34 13-48 2-35 (343)
335 PRK14192 bifunctional 5,10-met 96.6 0.011 2.5E-07 41.6 6.6 35 11-48 157-191 (283)
336 TIGR01772 MDH_euk_gproteo mala 96.4 0.026 5.7E-07 40.3 7.7 102 15-119 1-106 (312)
337 PRK00258 aroE shikimate 5-dehy 96.3 0.0083 1.8E-07 42.0 4.7 37 11-51 121-158 (278)
338 PRK08664 aspartate-semialdehyd 96.3 0.0085 1.8E-07 43.4 4.6 35 13-49 3-37 (349)
339 PTZ00117 malate dehydrogenase; 96.2 0.097 2.1E-06 37.5 9.8 103 11-117 3-110 (319)
340 PRK14106 murD UDP-N-acetylmura 96.2 0.0085 1.8E-07 44.5 4.6 36 11-50 3-38 (450)
341 PLN02968 Probable N-acetyl-gam 96.2 0.0087 1.9E-07 43.9 4.4 35 13-49 38-72 (381)
342 cd01075 NAD_bind_Leu_Phe_Val_D 96.2 0.012 2.5E-07 39.4 4.6 38 10-51 25-62 (200)
343 PRK11199 tyrA bifunctional cho 96.1 0.01 2.2E-07 43.4 4.3 35 13-50 98-132 (374)
344 PTZ00082 L-lactate dehydrogena 96.1 0.14 2.9E-06 36.8 10.0 104 11-118 4-117 (321)
345 PRK08655 prephenate dehydrogen 96.1 0.0091 2E-07 44.5 4.1 35 14-51 1-35 (437)
346 COG0039 Mdh Malate/lactate deh 96.1 0.11 2.5E-06 37.1 9.3 102 14-118 1-107 (313)
347 cd05292 LDH_2 A subgroup of L- 96.1 0.17 3.8E-06 36.0 10.4 100 14-118 1-105 (308)
348 PRK06223 malate dehydrogenase; 96.1 0.13 2.9E-06 36.4 9.8 100 13-117 2-107 (307)
349 cd05293 LDH_1 A subgroup of L- 96.0 0.15 3.3E-06 36.5 9.9 103 13-119 3-110 (312)
350 PRK05671 aspartate-semialdehyd 96.0 0.017 3.7E-07 41.7 5.1 35 14-48 5-39 (336)
351 PRK09310 aroDE bifunctional 3- 96.0 0.028 6.1E-07 42.4 6.3 36 11-50 330-365 (477)
352 PRK14175 bifunctional 5,10-met 96.0 0.046 9.9E-07 38.6 6.9 37 11-50 156-192 (286)
353 cd01065 NAD_bind_Shikimate_DH 96.0 0.016 3.5E-07 36.6 4.3 38 11-51 17-54 (155)
354 PRK06849 hypothetical protein; 96.0 0.016 3.5E-07 42.4 4.8 37 12-51 3-39 (389)
355 PLN00112 malate dehydrogenase 95.9 0.14 3.1E-06 38.4 9.4 103 13-118 100-214 (444)
356 TIGR01757 Malate-DH_plant mala 95.9 0.12 2.6E-06 38.1 8.9 102 13-118 44-158 (387)
357 PLN02520 bifunctional 3-dehydr 95.9 0.016 3.4E-07 44.3 4.5 36 11-50 377-412 (529)
358 PRK06444 prephenate dehydrogen 95.7 0.018 3.8E-07 38.5 3.9 29 14-45 1-29 (197)
359 PF01113 DapB_N: Dihydrodipico 95.7 0.032 6.8E-07 34.4 4.8 35 14-50 1-36 (124)
360 cd00650 LDH_MDH_like NAD-depen 95.6 0.22 4.7E-06 34.6 9.2 101 16-118 1-108 (263)
361 PRK06129 3-hydroxyacyl-CoA deh 95.6 0.02 4.3E-07 40.7 3.9 34 14-51 3-36 (308)
362 TIGR02354 thiF_fam2 thiamine b 95.6 0.017 3.8E-07 38.6 3.4 40 7-49 15-54 (200)
363 PRK06718 precorrin-2 dehydroge 95.5 0.03 6.6E-07 37.5 4.5 35 11-49 8-42 (202)
364 KOG1198|consensus 95.5 0.027 5.9E-07 40.8 4.5 26 11-36 156-181 (347)
365 TIGR00507 aroE shikimate 5-deh 95.5 0.033 7.1E-07 38.9 4.6 36 12-51 116-151 (270)
366 TIGR01763 MalateDH_bact malate 95.4 0.28 6.1E-06 35.0 9.2 99 14-118 2-107 (305)
367 PF02826 2-Hacid_dh_C: D-isome 95.4 0.055 1.2E-06 35.4 5.2 38 10-51 33-70 (178)
368 COG0136 Asd Aspartate-semialde 95.3 0.056 1.2E-06 38.9 5.5 35 13-47 1-35 (334)
369 TIGR01850 argC N-acetyl-gamma- 95.3 0.031 6.6E-07 40.5 4.1 30 14-45 1-30 (346)
370 TIGR01296 asd_B aspartate-semi 95.3 0.031 6.8E-07 40.4 4.1 35 15-49 1-35 (339)
371 COG3268 Uncharacterized conser 95.3 0.021 4.6E-07 41.1 3.2 35 14-51 7-41 (382)
372 PF02882 THF_DHG_CYH_C: Tetrah 95.2 0.16 3.5E-06 32.9 6.9 37 11-50 34-70 (160)
373 TIGR02853 spore_dpaA dipicolin 95.2 0.039 8.4E-07 39.0 4.4 37 11-51 149-185 (287)
374 cd08259 Zn_ADH5 Alcohol dehydr 95.2 0.04 8.8E-07 38.7 4.5 36 12-50 162-197 (332)
375 PRK07688 thiamine/molybdopteri 95.1 0.041 8.8E-07 39.8 4.3 38 10-50 21-58 (339)
376 PRK05690 molybdopterin biosynt 95.1 0.045 9.8E-07 37.7 4.3 37 10-49 29-65 (245)
377 COG2085 Predicted dinucleotide 95.1 0.041 8.8E-07 37.1 3.9 34 15-51 2-35 (211)
378 TIGR00978 asd_EA aspartate-sem 95.0 0.045 9.8E-07 39.5 4.4 31 14-46 1-31 (341)
379 PLN02383 aspartate semialdehyd 95.0 0.067 1.5E-06 38.8 5.2 35 13-47 7-41 (344)
380 PLN02602 lactate dehydrogenase 95.0 0.56 1.2E-05 34.2 9.9 101 14-118 38-143 (350)
381 cd01485 E1-1_like Ubiquitin ac 95.0 0.046 9.9E-07 36.5 4.1 38 10-50 16-53 (198)
382 PF02737 3HCDH_N: 3-hydroxyacy 95.0 0.043 9.2E-07 36.1 3.8 33 15-51 1-33 (180)
383 cd05191 NAD_bind_amino_acid_DH 94.9 0.089 1.9E-06 30.1 4.7 35 11-48 21-55 (86)
384 cd08295 double_bond_reductase_ 94.9 0.055 1.2E-06 38.6 4.5 37 11-50 150-186 (338)
385 PF13241 NAD_binding_7: Putati 94.8 0.038 8.3E-07 32.8 3.0 36 11-50 5-40 (103)
386 PRK09496 trkA potassium transp 94.7 0.044 9.5E-07 40.7 3.8 34 14-51 1-34 (453)
387 cd01492 Aos1_SUMO Ubiquitin ac 94.7 0.054 1.2E-06 36.1 3.8 38 10-50 18-55 (197)
388 PF12953 DUF3842: Domain of un 94.7 0.12 2.6E-06 32.1 4.9 36 15-50 2-37 (131)
389 PRK14194 bifunctional 5,10-met 94.7 0.087 1.9E-06 37.5 4.9 38 11-51 157-194 (301)
390 PRK08040 putative semialdehyde 94.6 0.091 2E-06 38.0 5.0 35 13-48 4-39 (336)
391 cd05290 LDH_3 A subgroup of L- 94.6 0.55 1.2E-05 33.6 8.9 103 15-119 1-109 (307)
392 PRK12475 thiamine/molybdopteri 94.5 0.077 1.7E-06 38.4 4.5 39 9-50 20-58 (338)
393 PRK10792 bifunctional 5,10-met 94.5 0.23 4.9E-06 35.2 6.6 38 11-51 157-194 (285)
394 TIGR02356 adenyl_thiF thiazole 94.4 0.065 1.4E-06 35.8 3.7 39 9-50 17-55 (202)
395 cd08294 leukotriene_B4_DH_like 94.4 0.089 1.9E-06 37.1 4.5 36 12-50 143-178 (329)
396 TIGR02825 B4_12hDH leukotriene 94.4 0.099 2.1E-06 37.0 4.7 36 12-50 138-173 (325)
397 PRK14188 bifunctional 5,10-met 94.3 0.11 2.4E-06 36.9 4.8 36 11-49 156-192 (296)
398 PRK06719 precorrin-2 dehydroge 94.3 0.14 2.9E-06 33.0 4.8 33 11-47 11-43 (157)
399 PF02670 DXP_reductoisom: 1-de 94.3 0.12 2.6E-06 32.2 4.4 35 16-51 1-35 (129)
400 cd01339 LDH-like_MDH L-lactate 94.2 0.66 1.4E-05 32.8 8.6 98 16-118 1-104 (300)
401 COG0289 DapB Dihydrodipicolina 94.2 0.13 2.7E-06 35.9 4.8 38 13-51 2-39 (266)
402 PRK00048 dihydrodipicolinate r 94.2 0.14 3E-06 35.6 5.0 35 14-50 2-37 (257)
403 COG0604 Qor NADPH:quinone redu 94.2 0.087 1.9E-06 37.8 4.1 33 13-48 143-175 (326)
404 KOG4022|consensus 94.1 0.087 1.9E-06 34.4 3.7 35 14-51 4-38 (236)
405 PRK13243 glyoxylate reductase; 94.1 0.12 2.5E-06 37.3 4.7 38 10-51 147-184 (333)
406 cd00757 ThiF_MoeB_HesA_family 94.1 0.081 1.8E-06 36.0 3.7 38 9-49 17-54 (228)
407 PRK08818 prephenate dehydrogen 94.0 0.12 2.7E-06 37.8 4.7 35 13-49 4-38 (370)
408 cd08293 PTGR2 Prostaglandin re 94.0 0.11 2.3E-06 37.1 4.4 34 14-50 156-190 (345)
409 cd08253 zeta_crystallin Zeta-c 94.0 0.12 2.6E-06 35.9 4.5 37 11-50 143-179 (325)
410 cd00300 LDH_like L-lactate deh 94.0 1.1 2.3E-05 31.9 9.3 99 16-118 1-104 (300)
411 PRK14189 bifunctional 5,10-met 93.9 0.32 6.8E-06 34.5 6.4 36 11-49 156-191 (285)
412 PF03446 NAD_binding_2: NAD bi 93.9 0.16 3.4E-06 32.7 4.6 35 13-51 1-35 (163)
413 cd05276 p53_inducible_oxidored 93.8 0.15 3.2E-06 35.4 4.7 37 11-50 138-174 (323)
414 PLN03154 putative allyl alcoho 93.8 0.14 3E-06 36.9 4.6 37 11-50 157-193 (348)
415 PRK11863 N-acetyl-gamma-glutam 93.7 0.16 3.5E-06 36.4 4.7 35 13-49 2-36 (313)
416 PRK08644 thiamine biosynthesis 93.7 0.11 2.4E-06 35.0 3.8 38 9-49 24-61 (212)
417 PRK09260 3-hydroxybutyryl-CoA 93.7 0.1 2.2E-06 36.7 3.7 34 14-51 2-35 (288)
418 PRK14176 bifunctional 5,10-met 93.7 0.44 9.5E-06 33.8 6.7 37 11-50 162-198 (287)
419 cd01483 E1_enzyme_family Super 93.7 0.17 3.7E-06 31.7 4.4 33 15-50 1-33 (143)
420 PRK08306 dipicolinate synthase 93.6 0.16 3.4E-06 36.1 4.5 37 11-51 150-186 (296)
421 COG0002 ArgC Acetylglutamate s 93.5 0.14 2.9E-06 37.1 4.1 34 13-48 2-35 (349)
422 PRK06522 2-dehydropantoate 2-r 93.5 0.13 2.9E-06 36.0 4.1 34 14-51 1-34 (304)
423 PRK05447 1-deoxy-D-xylulose 5- 93.5 0.19 4E-06 37.1 4.8 35 13-48 1-35 (385)
424 PLN02256 arogenate dehydrogena 93.4 0.17 3.8E-06 36.0 4.5 36 11-50 34-69 (304)
425 PRK05597 molybdopterin biosynt 93.4 0.13 2.9E-06 37.4 4.1 39 9-50 24-62 (355)
426 PRK00094 gpsA NAD(P)H-dependen 93.4 0.15 3.2E-06 36.2 4.2 34 14-51 2-35 (325)
427 PRK05476 S-adenosyl-L-homocyst 93.3 0.18 3.9E-06 37.7 4.6 37 11-51 210-246 (425)
428 PRK07417 arogenate dehydrogena 93.3 0.13 2.9E-06 36.0 3.8 34 14-51 1-34 (279)
429 TIGR01809 Shik-DH-AROM shikima 93.3 0.21 4.6E-06 35.2 4.8 38 11-51 123-160 (282)
430 TIGR01851 argC_other N-acetyl- 93.3 0.16 3.5E-06 36.3 4.1 31 15-47 3-33 (310)
431 cd05311 NAD_bind_2_malic_enz N 93.3 0.21 4.6E-06 34.0 4.6 36 11-49 23-60 (226)
432 COG0287 TyrA Prephenate dehydr 93.2 0.21 4.5E-06 35.2 4.6 35 14-52 4-38 (279)
433 TIGR01035 hemA glutamyl-tRNA r 93.2 0.18 4E-06 37.4 4.6 38 11-51 178-215 (417)
434 cd05212 NAD_bind_m-THF_DH_Cycl 93.2 0.32 6.9E-06 30.8 5.0 37 11-50 26-62 (140)
435 PRK14191 bifunctional 5,10-met 93.2 0.67 1.5E-05 32.8 7.0 35 11-48 155-189 (285)
436 PRK12480 D-lactate dehydrogena 93.1 0.22 4.8E-06 35.9 4.7 38 10-51 143-180 (330)
437 PRK14027 quinate/shikimate deh 93.1 0.23 5E-06 35.0 4.7 38 11-51 125-162 (283)
438 cd05213 NAD_bind_Glutamyl_tRNA 93.1 0.19 4.1E-06 35.8 4.3 38 11-51 176-213 (311)
439 cd08268 MDR2 Medium chain dehy 93.1 0.21 4.6E-06 34.8 4.6 37 11-50 143-179 (328)
440 PRK14179 bifunctional 5,10-met 93.1 0.21 4.5E-06 35.3 4.4 33 11-46 156-188 (284)
441 TIGR00243 Dxr 1-deoxy-D-xylulo 93.0 0.21 4.7E-06 36.7 4.5 37 14-51 2-38 (389)
442 PRK12409 D-amino acid dehydrog 93.0 0.21 4.6E-06 36.6 4.6 33 14-50 2-34 (410)
443 cd05188 MDR Medium chain reduc 93.0 0.19 4.2E-06 34.0 4.1 36 11-50 133-168 (271)
444 PRK09496 trkA potassium transp 93.0 0.2 4.4E-06 37.2 4.5 36 12-51 230-265 (453)
445 PRK01438 murD UDP-N-acetylmura 92.9 0.24 5.1E-06 37.3 4.9 36 11-50 14-49 (480)
446 PRK14172 bifunctional 5,10-met 92.9 0.66 1.4E-05 32.8 6.6 37 11-50 156-192 (278)
447 KOG1496|consensus 92.8 0.081 1.8E-06 36.6 2.0 22 14-35 5-26 (332)
448 PRK14180 bifunctional 5,10-met 92.8 0.69 1.5E-05 32.7 6.6 37 11-50 156-192 (282)
449 PRK13940 glutamyl-tRNA reducta 92.8 0.23 5.1E-06 36.9 4.5 38 11-51 179-216 (414)
450 cd08266 Zn_ADH_like1 Alcohol d 92.7 0.25 5.4E-06 34.7 4.6 37 11-50 165-201 (342)
451 PF12242 Eno-Rase_NADH_b: NAD( 92.7 0.25 5.5E-06 27.9 3.6 31 14-48 40-72 (78)
452 PRK14177 bifunctional 5,10-met 92.7 0.72 1.6E-05 32.7 6.6 37 11-50 157-193 (284)
453 PF03807 F420_oxidored: NADP o 92.7 0.3 6.5E-06 28.2 4.2 33 15-51 1-37 (96)
454 cd08289 MDR_yhfp_like Yhfp put 92.7 0.25 5.5E-06 34.7 4.5 36 13-51 147-182 (326)
455 PRK08293 3-hydroxybutyryl-CoA 92.7 0.22 4.8E-06 35.0 4.1 34 14-51 4-37 (287)
456 TIGR02824 quinone_pig3 putativ 92.6 0.27 5.7E-06 34.2 4.5 37 11-50 138-174 (325)
457 PRK14173 bifunctional 5,10-met 92.6 0.74 1.6E-05 32.6 6.6 37 11-50 153-189 (287)
458 PRK12549 shikimate 5-dehydroge 92.6 0.29 6.3E-06 34.5 4.6 38 11-51 125-162 (284)
459 PRK06035 3-hydroxyacyl-CoA deh 92.5 0.22 4.8E-06 35.0 4.0 34 14-51 4-37 (291)
460 cd08250 Mgc45594_like Mgc45594 92.4 0.27 5.9E-06 34.6 4.4 37 11-50 138-174 (329)
461 PRK14190 bifunctional 5,10-met 92.4 1 2.3E-05 31.9 7.1 35 11-48 156-190 (284)
462 PRK07819 3-hydroxybutyryl-CoA 92.4 0.23 5E-06 35.0 4.0 35 14-52 6-40 (286)
463 PRK14619 NAD(P)H-dependent gly 92.3 0.35 7.6E-06 34.4 4.9 36 12-51 3-38 (308)
464 PRK14186 bifunctional 5,10-met 92.2 0.87 1.9E-05 32.5 6.6 36 11-49 156-191 (297)
465 PF00899 ThiF: ThiF family; I 92.2 0.45 9.7E-06 29.5 4.7 34 13-49 2-35 (135)
466 cd05288 PGDH Prostaglandin deh 92.2 0.29 6.4E-06 34.4 4.3 36 12-50 145-180 (329)
467 PLN02928 oxidoreductase family 92.1 0.31 6.7E-06 35.4 4.4 36 10-49 156-191 (347)
468 PRK06019 phosphoribosylaminoim 92.1 0.44 9.6E-06 34.8 5.2 36 13-52 2-37 (372)
469 cd01487 E1_ThiF_like E1_ThiF_l 92.0 0.35 7.6E-06 31.6 4.2 33 15-50 1-33 (174)
470 COG1052 LdhA Lactate dehydroge 92.0 0.76 1.7E-05 33.1 6.2 37 11-51 144-180 (324)
471 PRK14169 bifunctional 5,10-met 91.9 1 2.2E-05 31.9 6.6 36 11-49 154-189 (282)
472 PF03721 UDPG_MGDP_dh_N: UDP-g 91.9 0.38 8.2E-06 31.8 4.3 34 14-51 1-34 (185)
473 TIGR00036 dapB dihydrodipicoli 91.9 0.46 9.9E-06 33.2 4.9 34 14-49 2-36 (266)
474 PRK14187 bifunctional 5,10-met 91.9 0.96 2.1E-05 32.2 6.5 37 11-50 158-194 (294)
475 cd08237 ribitol-5-phosphate_DH 91.8 0.47 1E-05 34.0 5.1 38 12-51 163-200 (341)
476 KOG0023|consensus 91.8 0.52 1.1E-05 34.0 5.0 36 12-51 181-216 (360)
477 PRK00045 hemA glutamyl-tRNA re 91.8 0.37 7.9E-06 35.9 4.6 37 11-51 180-217 (423)
478 PRK14170 bifunctional 5,10-met 91.8 1.1 2.3E-05 31.8 6.6 37 11-50 155-191 (284)
479 PLN02545 3-hydroxybutyryl-CoA 91.8 0.3 6.6E-06 34.4 4.0 34 14-51 5-38 (295)
480 PRK06598 aspartate-semialdehyd 91.8 0.19 4.1E-06 36.9 3.0 23 14-36 2-24 (369)
481 PRK07530 3-hydroxybutyryl-CoA 91.7 0.36 7.9E-06 33.9 4.3 34 14-51 5-38 (292)
482 PRK14166 bifunctional 5,10-met 91.6 1.1 2.4E-05 31.7 6.5 37 11-50 155-191 (282)
483 KOG1202|consensus 91.6 0.21 4.5E-06 42.1 3.2 110 11-123 1766-1898(2376)
484 COG0169 AroE Shikimate 5-dehyd 91.6 0.57 1.2E-05 33.2 5.1 37 12-51 125-161 (283)
485 PRK05808 3-hydroxybutyryl-CoA 91.6 0.32 6.9E-06 34.0 3.9 34 14-51 4-37 (282)
486 smart00859 Semialdhyde_dh Semi 91.6 0.36 7.8E-06 29.3 3.7 33 15-49 1-34 (122)
487 PRK12749 quinate/shikimate deh 91.6 0.62 1.3E-05 33.0 5.3 38 11-51 122-159 (288)
488 PRK06249 2-dehydropantoate 2-r 91.6 0.45 9.8E-06 33.8 4.7 34 13-50 5-38 (313)
489 PRK14183 bifunctional 5,10-met 91.5 1.1 2.4E-05 31.7 6.5 35 11-48 155-189 (281)
490 cd05289 MDR_like_2 alcohol deh 91.5 0.49 1.1E-05 32.6 4.8 37 11-50 143-179 (309)
491 PLN03139 formate dehydrogenase 91.5 0.39 8.4E-06 35.5 4.3 37 10-50 196-232 (386)
492 cd01489 Uba2_SUMO Ubiquitin ac 91.5 0.36 7.9E-06 34.6 4.1 34 15-51 1-34 (312)
493 cd08244 MDR_enoyl_red Possible 91.4 0.44 9.5E-06 33.4 4.5 36 12-50 142-177 (324)
494 PRK07066 3-hydroxybutyryl-CoA 91.4 0.38 8.2E-06 34.6 4.2 34 14-51 8-41 (321)
495 PRK08762 molybdopterin biosynt 91.4 0.29 6.2E-06 35.9 3.7 37 10-49 132-168 (376)
496 TIGR01470 cysG_Nterm siroheme 91.4 0.56 1.2E-05 31.5 4.8 36 11-50 7-42 (205)
497 cd08241 QOR1 Quinone oxidoredu 91.3 0.48 1.1E-05 32.8 4.6 37 11-50 138-174 (323)
498 PRK14171 bifunctional 5,10-met 91.3 1.2 2.7E-05 31.6 6.5 36 11-49 157-192 (288)
499 TIGR02355 moeB molybdopterin s 91.3 0.43 9.3E-06 32.9 4.2 40 9-51 20-59 (240)
500 PLN02696 1-deoxy-D-xylulose-5- 91.3 0.6 1.3E-05 35.1 5.2 37 13-50 57-93 (454)
No 1
>KOG1221|consensus
Probab=99.81 E-value=2.4e-19 Score=130.53 Aligned_cols=118 Identities=39% Similarity=0.692 Sum_probs=100.1
Q ss_pred ccccccCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhccCChhhhhhhh---------
Q psy897 6 TVEDFYKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDNEGPIFKDFANL--------- 76 (125)
Q Consensus 6 ~~~~~~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~l~~~--------- 76 (125)
.+.+++++|+|+|||||||+|+-++++|++.-|+..+|+.+.|++...+..+++..+.. .++|+.+++.
T Consensus 5 ~i~~f~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~--~~lF~~l~~~~p~~l~Kv~ 82 (467)
T KOG1221|consen 5 DIVQFYKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELK--DPLFEVLKEKKPEALEKVV 82 (467)
T ss_pred cHHHHhCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHh--hhHHHHHHhhCccceecce
Confidence 36778999999999999999999999999987788899999999998888888887766 4555544332
Q ss_pred ----------cCcc---------CCCeEEEeccccCcchhHHHHhHhhHHHHHHHHHHHhhCCCCcCC
Q psy897 77 ----------VRLK---------TQRIRFIFLATLRFDEELKIAIRTNICATQTVVKLAKQCPHLRLF 125 (125)
Q Consensus 77 ----------~~l~---------~~~~Vih~a~~~~~~~~~~~~~~~Nv~g~~~l~~~~~~~~~~~~~ 125 (125)
.+++ .+++|||+||.++++++.+.+..+|+.||.++++.|+++++++.|
T Consensus 83 pi~GDi~~~~LGis~~D~~~l~~eV~ivih~AAtvrFde~l~~al~iNt~Gt~~~l~lak~~~~l~~~ 150 (467)
T KOG1221|consen 83 PIAGDISEPDLGISESDLRTLADEVNIVIHSAATVRFDEPLDVALGINTRGTRNVLQLAKEMVKLKAL 150 (467)
T ss_pred eccccccCcccCCChHHHHHHHhcCCEEEEeeeeeccchhhhhhhhhhhHhHHHHHHHHHHhhhhheE
Confidence 1222 336999999999999999999999999999999999999998765
No 2
>PLN02996 fatty acyl-CoA reductase
Probab=99.78 E-value=2.8e-18 Score=127.48 Aligned_cols=120 Identities=26% Similarity=0.532 Sum_probs=89.1
Q ss_pred ccccccCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHH-Hhhh--------------------
Q psy897 6 TVEDFYKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIE-KMLD-------------------- 64 (125)
Q Consensus 6 ~~~~~~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~-~~~~-------------------- 64 (125)
.+.+++++|+|+|||||||||++|+++|++..++..+|+++.|+.......+++. ++..
T Consensus 4 ~i~~~~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~ 83 (491)
T PLN02996 4 SCVQFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLIS 83 (491)
T ss_pred cHHHHhCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhh
Confidence 5678899999999999999999999999987566679999999877665555543 2221
Q ss_pred -ccCChhhhhhhh-cCc----------cCCCeEEEeccccCcchhHHHHhHhhHHHHHHHHHHHhhCCCCcCC
Q psy897 65 -NEGPIFKDFANL-VRL----------KTQRIRFIFLATLRFDEELKIAIRTNICATQTVVKLAKQCPHLRLF 125 (125)
Q Consensus 65 -~~~~~~~~l~~~-~~l----------~~~~~Vih~a~~~~~~~~~~~~~~~Nv~g~~~l~~~~~~~~~~~~~ 125 (125)
+...+.+|+..+ .++ +..|+|||+||.+++..++...+++|+.||.+++++|++++.+++|
T Consensus 84 ~kv~~i~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~ 156 (491)
T PLN02996 84 EKVTPVPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNFDERYDVALGINTLGALNVLNFAKKCVKVKML 156 (491)
T ss_pred cCEEEEecccCCcCCCCChHHHHHHHHhCCCEEEECccccCCcCCHHHHHHHHHHHHHHHHHHHHhcCCCCeE
Confidence 001122344311 011 1347999999998877778889999999999999999987667654
No 3
>KOG1502|consensus
Probab=99.78 E-value=6.8e-19 Score=123.18 Aligned_cols=111 Identities=19% Similarity=0.225 Sum_probs=83.7
Q ss_pred CCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhh---ccCChhhhhhhhcCcc----CCCe
Q psy897 12 KDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLD---NEGPIFKDFANLVRLK----TQRI 84 (125)
Q Consensus 12 ~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~l~~~~~l~----~~~~ 84 (125)
.+++|+||||+||||++|++.|+++ |+.|++..|++.+....+.+.++.. +...+..||.+...++ ..|.
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~r---GY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~gcdg 81 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSR---GYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDGCDG 81 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhC---CCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHhCCCE
Confidence 5789999999999999999999999 8999999998876332222333221 1122335666554443 3479
Q ss_pred EEEeccccCcch--hHHHHhHhhHHHHHHHHHHHhhCCCCcCC
Q psy897 85 RFIFLATLRFDE--ELKIAIRTNICATQTVVKLAKQCPHLRLF 125 (125)
Q Consensus 85 Vih~a~~~~~~~--~~~~~~~~Nv~g~~~l~~~~~~~~~~~~~ 125 (125)
|+|.|....++. +..+.++..+.||.+++++|++.+++||+
T Consensus 82 VfH~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrv 124 (327)
T KOG1502|consen 82 VFHTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRV 124 (327)
T ss_pred EEEeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceE
Confidence 999999986642 35578899999999999999999989885
No 4
>PLN02503 fatty acyl-CoA reductase 2
Probab=99.76 E-value=7e-18 Score=127.24 Aligned_cols=119 Identities=28% Similarity=0.561 Sum_probs=89.1
Q ss_pred cccccCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHH-Hhhh---------------------
Q psy897 7 VEDFYKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIE-KMLD--------------------- 64 (125)
Q Consensus 7 ~~~~~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~-~~~~--------------------- 64 (125)
+.+++++|+|||||||||||++|+++|++..|+..+|+++.|.+......+++. ++.+
T Consensus 113 I~~f~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~ 192 (605)
T PLN02503 113 IAEFLRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLS 192 (605)
T ss_pred hhhhhcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccc
Confidence 456789999999999999999999999987566679999999877655555553 2221
Q ss_pred ccCChhhhhhhh-cCcc---------CCCeEEEeccccCcchhHHHHhHhhHHHHHHHHHHHhhCCCCcCC
Q psy897 65 NEGPIFKDFANL-VRLK---------TQRIRFIFLATLRFDEELKIAIRTNICATQTVVKLAKQCPHLRLF 125 (125)
Q Consensus 65 ~~~~~~~~l~~~-~~l~---------~~~~Vih~a~~~~~~~~~~~~~~~Nv~g~~~l~~~~~~~~~~~~~ 125 (125)
+...+.+|+.+. .+++ ..|+|||+||...+..+++..+++|+.|+.+++++|++++.+++|
T Consensus 193 Ki~~v~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f~~~~~~a~~vNV~GT~nLLelA~~~~~lk~f 263 (605)
T PLN02503 193 KLVPVVGNVCESNLGLEPDLADEIAKEVDVIINSAANTTFDERYDVAIDINTRGPCHLMSFAKKCKKLKLF 263 (605)
T ss_pred cEEEEEeeCCCcccCCCHHHHHHHHhcCCEEEECccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCCeE
Confidence 001122344432 1221 347999999999888888889999999999999999988777654
No 5
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=99.70 E-value=7.8e-17 Score=115.17 Aligned_cols=112 Identities=17% Similarity=0.126 Sum_probs=74.4
Q ss_pred ccCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCH-HHHHHHhh-----hccCChhhhhhhhcCc----
Q psy897 10 FYKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSP-QERIEKML-----DNEGPIFKDFANLVRL---- 79 (125)
Q Consensus 10 ~~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~-~~~~~~~~-----~~~~~~~~~l~~~~~l---- 79 (125)
.+++|+|+||||+||||++|++.|+++ +++|++++|....... ........ .....+..|+.+...+
T Consensus 12 ~~~~~~vlVtGatGfiG~~lv~~L~~~---g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~ 88 (348)
T PRK15181 12 VLAPKRWLITGVAGFIGSGLLEELLFL---NQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKAC 88 (348)
T ss_pred cccCCEEEEECCccHHHHHHHHHHHHC---CCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHh
Confidence 467899999999999999999999998 7999999985442111 11111000 0001122344432221
Q ss_pred cCCCeEEEeccccCcc---hhHHHHhHhhHHHHHHHHHHHhhCCCCcCC
Q psy897 80 KTQRIRFIFLATLRFD---EELKIAIRTNICATQTVVKLAKQCPHLRLF 125 (125)
Q Consensus 80 ~~~~~Vih~a~~~~~~---~~~~~~~~~Nv~g~~~l~~~~~~~~~~~~~ 125 (125)
+..|+|||+|+..... .++...+++|+.||.+++++|++.+ +++|
T Consensus 89 ~~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~-~~~~ 136 (348)
T PRK15181 89 KNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAH-VSSF 136 (348)
T ss_pred hCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCeE
Confidence 1347999999986422 3456678899999999999998863 5553
No 6
>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. 3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process
Probab=99.69 E-value=3.3e-17 Score=114.15 Aligned_cols=105 Identities=21% Similarity=0.229 Sum_probs=73.1
Q ss_pred EEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhccCChhhhhhhhcCcc----CCCeEEEecccc
Q psy897 17 FLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDNEGPIFKDFANLVRLK----TQRIRFIFLATL 92 (125)
Q Consensus 17 litG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~----~~~~Vih~a~~~ 92 (125)
|||||+||+|++|+++|+++.+ .+.|.++++.+...... ....... ...+..|+.+...+. ..|+|||+|+..
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~-~~~Vr~~d~~~~~~~~~-~~~~~~~-~~~~~~Di~d~~~l~~a~~g~d~V~H~Aa~~ 77 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGY-IYEVRVLDRSPPPKFLK-DLQKSGV-KEYIQGDITDPESLEEALEGVDVVFHTAAPV 77 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCC-ceEEEEcccccccccch-hhhcccc-eeEEEeccccHHHHHHHhcCCceEEEeCccc
Confidence 6999999999999999999921 27999998866532211 1111111 012345565543332 347999999987
Q ss_pred Ccc--hhHHHHhHhhHHHHHHHHHHHhhCCCCcCC
Q psy897 93 RFD--EELKIAIRTNICATQTVVKLAKQCPHLRLF 125 (125)
Q Consensus 93 ~~~--~~~~~~~~~Nv~g~~~l~~~~~~~~~~~~~ 125 (125)
... .+.+..+++|+.||.+++++|++. ++|+|
T Consensus 78 ~~~~~~~~~~~~~vNV~GT~nvl~aa~~~-~Vkrl 111 (280)
T PF01073_consen 78 PPWGDYPPEEYYKVNVDGTRNVLEAARKA-GVKRL 111 (280)
T ss_pred cccCcccHHHHHHHHHHHHHHHHHHHHHc-CCCEE
Confidence 544 456778899999999999999986 57764
No 7
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=99.67 E-value=2.4e-16 Score=108.75 Aligned_cols=103 Identities=17% Similarity=0.211 Sum_probs=73.5
Q ss_pred ceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhccCChhhhhhhhcCcc------CCCeEEE
Q psy897 14 GVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDNEGPIFKDFANLVRLK------TQRIRFI 87 (125)
Q Consensus 14 ~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~------~~~~Vih 87 (125)
|+||||||+||||++.+.+|++. |++|+++|+-..... +.+..... .....|+++...++ ..|.|||
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~---G~~vvV~DNL~~g~~--~~v~~~~~--~f~~gDi~D~~~L~~vf~~~~idaViH 73 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKT---GHEVVVLDNLSNGHK--IALLKLQF--KFYEGDLLDRALLTAVFEENKIDAVVH 73 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHC---CCeEEEEecCCCCCH--HHhhhccC--ceEEeccccHHHHHHHHHhcCCCEEEE
Confidence 57999999999999999999998 899999998554321 12211101 22233444332222 2379999
Q ss_pred eccccCcc---hhHHHHhHhhHHHHHHHHHHHhhCCCCcC
Q psy897 88 FLATLRFD---EELKIAIRTNICATQTVVKLAKQCPHLRL 124 (125)
Q Consensus 88 ~a~~~~~~---~~~~~~~~~Nv~g~~~l~~~~~~~~~~~~ 124 (125)
+||...+- +.|-+.++.|+.||.+|+++|++.. +++
T Consensus 74 FAa~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~g-v~~ 112 (329)
T COG1087 74 FAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTG-VKK 112 (329)
T ss_pred CccccccchhhhCHHHHHhhchHhHHHHHHHHHHhC-CCE
Confidence 99997543 4567888999999999999999875 554
No 8
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=99.66 E-value=5.5e-16 Score=110.72 Aligned_cols=111 Identities=19% Similarity=0.246 Sum_probs=74.1
Q ss_pred ccCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHH-HHHHHhhhccCChhhhhhhhcCcc------CC
Q psy897 10 FYKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQ-ERIEKMLDNEGPIFKDFANLVRLK------TQ 82 (125)
Q Consensus 10 ~~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~l~------~~ 82 (125)
++++|+++||||+||||+++++.|+++ |++|++++|........ .... .......+..|+.+...+. ..
T Consensus 1 ~~~~k~ilItGatG~IG~~l~~~L~~~---G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 76 (349)
T TIGR02622 1 FWQGKKVLVTGHTGFKGSWLSLWLLEL---GAEVYGYSLDPPTSPNLFELLN-LAKKIEDHFGDIRDAAKLRKAIAEFKP 76 (349)
T ss_pred CcCCCEEEEECCCChhHHHHHHHHHHC---CCEEEEEeCCCccchhHHHHHh-hcCCceEEEccCCCHHHHHHHHhhcCC
Confidence 367899999999999999999999998 79999999876532111 1111 0010011223444322221 23
Q ss_pred CeEEEeccccCcc---hhHHHHhHhhHHHHHHHHHHHhhCCCCcC
Q psy897 83 RIRFIFLATLRFD---EELKIAIRTNICATQTVVKLAKQCPHLRL 124 (125)
Q Consensus 83 ~~Vih~a~~~~~~---~~~~~~~~~Nv~g~~~l~~~~~~~~~~~~ 124 (125)
|+|||+||..... .++...+++|+.++.+++++|++....++
T Consensus 77 d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~ 121 (349)
T TIGR02622 77 EIVFHLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKA 121 (349)
T ss_pred CEEEECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCE
Confidence 8999999975322 35567889999999999999987643443
No 9
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=99.65 E-value=8.4e-16 Score=108.34 Aligned_cols=110 Identities=15% Similarity=0.192 Sum_probs=72.2
Q ss_pred CCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhh---ccCChhhhhhhhcCcc----CCCe
Q psy897 12 KDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLD---NEGPIFKDFANLVRLK----TQRI 84 (125)
Q Consensus 12 ~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~l~~~~~l~----~~~~ 84 (125)
++|+||||||+||||++|+++|++. |++|++++|+............... ....+..|+.+...+. ..|+
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~---g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~ 79 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQR---GYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCEG 79 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHC---CCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHcCCCE
Confidence 3689999999999999999999998 7999999987543211111111100 0011223444332221 3379
Q ss_pred EEEeccccCcc-hhH-HHHhHhhHHHHHHHHHHHhhCCCCcC
Q psy897 85 RFIFLATLRFD-EEL-KIAIRTNICATQTVVKLAKQCPHLRL 124 (125)
Q Consensus 85 Vih~a~~~~~~-~~~-~~~~~~Nv~g~~~l~~~~~~~~~~~~ 124 (125)
|||+|+..... .++ ...+++|+.|+.+++++|++..++++
T Consensus 80 Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~ 121 (322)
T PLN02662 80 VFHTASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVKR 121 (322)
T ss_pred EEEeCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCCE
Confidence 99999976322 233 36789999999999999987644554
No 10
>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila. A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.
Probab=99.64 E-value=2.1e-16 Score=108.37 Aligned_cols=103 Identities=30% Similarity=0.431 Sum_probs=63.7
Q ss_pred EecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhh--------------ccCChhhhhhhh-cCcc--
Q psy897 18 LTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLD--------------NEGPIFKDFANL-VRLK-- 80 (125)
Q Consensus 18 itG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~--------------~~~~~~~~l~~~-~~l~-- 80 (125)
|||||||+|++|+++|++..++ .+|+|+.|........+++.+... +...+.+|+..+ ++++
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~-~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~ 79 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPD-VKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDE 79 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-T-TEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HH
T ss_pred CcCCCcHHHHHHHHHHHcCCCC-cEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChH
Confidence 7999999999999999998322 399999997764344445532211 111223455442 2332
Q ss_pred -------CCCeEEEeccccCcchhHHHHhHhhHHHHHHHHHHHhhCCC
Q psy897 81 -------TQRIRFIFLATLRFDEELKIAIRTNICATQTVVKLAKQCPH 121 (125)
Q Consensus 81 -------~~~~Vih~a~~~~~~~~~~~~~~~Nv~g~~~l~~~~~~~~~ 121 (125)
..++||||||.+++..+++...++|+.||.++++.|.+.+.
T Consensus 80 ~~~~L~~~v~~IiH~Aa~v~~~~~~~~~~~~NV~gt~~ll~la~~~~~ 127 (249)
T PF07993_consen 80 DYQELAEEVDVIIHCAASVNFNAPYSELRAVNVDGTRNLLRLAAQGKR 127 (249)
T ss_dssp HHHHHHHH--EEEE--SS-SBS-S--EEHHHHHHHHHHHHHHHTSSS-
T ss_pred HhhccccccceeeecchhhhhcccchhhhhhHHHHHHHHHHHHHhccC
Confidence 34699999999999988888889999999999999986654
No 11
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=99.63 E-value=5.5e-16 Score=114.46 Aligned_cols=114 Identities=18% Similarity=0.232 Sum_probs=82.8
Q ss_pred ccccCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCC-HHHHHHHhhhc--cCChhhhhhhhcCcc----
Q psy897 8 EDFYKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVS-PQERIEKMLDN--EGPIFKDFANLVRLK---- 80 (125)
Q Consensus 8 ~~~~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~-~~~~~~~~~~~--~~~~~~~l~~~~~l~---- 80 (125)
...+++|+|+||||+|-||+.+|+++++. +..+++++++++.... ....+.+..+. ..+...|+++...+.
T Consensus 245 ~~~~~gK~vLVTGagGSiGsel~~qil~~--~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~ 322 (588)
T COG1086 245 GAMLTGKTVLVTGGGGSIGSELCRQILKF--NPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAME 322 (588)
T ss_pred HhHcCCCEEEEeCCCCcHHHHHHHHHHhc--CCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHh
Confidence 34688999999999999999999999998 3579999999776421 12222222110 123445666544333
Q ss_pred --CCCeEEEeccccC---cchhHHHHhHhhHHHHHHHHHHHhhCCCCcC
Q psy897 81 --TQRIRFIFLATLR---FDEELKIAIRTNICATQTVVKLAKQCPHLRL 124 (125)
Q Consensus 81 --~~~~Vih~a~~~~---~~~~~~~~~~~Nv~g~~~l~~~~~~~~~~~~ 124 (125)
.+|+|+|+||.-+ ...+|.+.+++|+.||.|++++|.+++ +++
T Consensus 323 ~~kvd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~-V~~ 370 (588)
T COG1086 323 GHKVDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNG-VKK 370 (588)
T ss_pred cCCCceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhC-CCE
Confidence 3689999999863 346789999999999999999998875 444
No 12
>PLN00198 anthocyanidin reductase; Provisional
Probab=99.63 E-value=1.9e-15 Score=107.47 Aligned_cols=111 Identities=15% Similarity=0.245 Sum_probs=72.4
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhh--hccCChhhhhhhhcCcc----CCCe
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKML--DNEGPIFKDFANLVRLK----TQRI 84 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~l~----~~~~ 84 (125)
+.+++|+||||+||||++|+++|++. |++|+++.|+............+. .....+..|+++...+. ..|+
T Consensus 7 ~~~~~vlItG~~GfIG~~l~~~L~~~---g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~ 83 (338)
T PLN00198 7 TGKKTACVIGGTGFLASLLIKLLLQK---GYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIAGCDL 83 (338)
T ss_pred CCCCeEEEECCchHHHHHHHHHHHHC---CCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHhcCCE
Confidence 45789999999999999999999998 799998888754321111111110 00011223444332221 3489
Q ss_pred EEEeccccCcc--hhHHHHhHhhHHHHHHHHHHHhhCCCCcC
Q psy897 85 RFIFLATLRFD--EELKIAIRTNICATQTVVKLAKQCPHLRL 124 (125)
Q Consensus 85 Vih~a~~~~~~--~~~~~~~~~Nv~g~~~l~~~~~~~~~~~~ 124 (125)
|||+||..... .+....+++|+.|+.+++++|.+...+++
T Consensus 84 vih~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~ 125 (338)
T PLN00198 84 VFHVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKR 125 (338)
T ss_pred EEEeCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccE
Confidence 99999976432 23345678999999999999887644444
No 13
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=99.62 E-value=2.7e-15 Score=105.98 Aligned_cols=111 Identities=15% Similarity=0.202 Sum_probs=73.5
Q ss_pred CCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhh---hccCChhhhhhhhcCcc----CCCe
Q psy897 12 KDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKML---DNEGPIFKDFANLVRLK----TQRI 84 (125)
Q Consensus 12 ~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~l~----~~~~ 84 (125)
.+++|+||||+||||++++++|+++ |++|+++.|+.............. .....+..|+.+...++ ..|+
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~---g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~ 80 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLR---GYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDA 80 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC---CCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCE
Confidence 4689999999999999999999998 799998888665321111111100 00011223444332222 2489
Q ss_pred EEEeccccCcc--hhHHHHhHhhHHHHHHHHHHHhhCCCCcCC
Q psy897 85 RFIFLATLRFD--EELKIAIRTNICATQTVVKLAKQCPHLRLF 125 (125)
Q Consensus 85 Vih~a~~~~~~--~~~~~~~~~Nv~g~~~l~~~~~~~~~~~~~ 125 (125)
|||+||..... ++....+++|+.|+.+++++|++.+++++|
T Consensus 81 vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rv 123 (322)
T PLN02986 81 VFHTASPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRV 123 (322)
T ss_pred EEEeCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCCccEE
Confidence 99999976432 333456789999999999999886556654
No 14
>PLN02650 dihydroflavonol-4-reductase
Probab=99.62 E-value=2.3e-15 Score=107.61 Aligned_cols=109 Identities=17% Similarity=0.232 Sum_probs=71.7
Q ss_pred CceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhh---ccCChhhhhhhhcCcc----CCCeE
Q psy897 13 DGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLD---NEGPIFKDFANLVRLK----TQRIR 85 (125)
Q Consensus 13 ~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~l~~~~~l~----~~~~V 85 (125)
.|+||||||+||||++++++|++. +++|++++|+............... ....+..|+.+...+. ..|+|
T Consensus 5 ~k~iLVTGatGfIGs~l~~~L~~~---G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~d~V 81 (351)
T PLN02650 5 KETVCVTGASGFIGSWLVMRLLER---GYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRGCTGV 81 (351)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHHC---CCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHhCCCEE
Confidence 578999999999999999999998 7999999886543221111110000 0011223444322221 34799
Q ss_pred EEeccccCcc--hhHHHHhHhhHHHHHHHHHHHhhCCCCcC
Q psy897 86 FIFLATLRFD--EELKIAIRTNICATQTVVKLAKQCPHLRL 124 (125)
Q Consensus 86 ih~a~~~~~~--~~~~~~~~~Nv~g~~~l~~~~~~~~~~~~ 124 (125)
||+|+..... .+....+++|+.|+.+++++|++...+++
T Consensus 82 iH~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r 122 (351)
T PLN02650 82 FHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRR 122 (351)
T ss_pred EEeCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceE
Confidence 9999976432 23346789999999999999988654444
No 15
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=99.61 E-value=1.5e-15 Score=104.66 Aligned_cols=106 Identities=21% Similarity=0.271 Sum_probs=73.8
Q ss_pred ceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhc--cCChhhhhhhhcCcc------CCCeE
Q psy897 14 GVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDN--EGPIFKDFANLVRLK------TQRIR 85 (125)
Q Consensus 14 ~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~l~------~~~~V 85 (125)
|++|||||+||||+++++.+++..++ .+|++++.-.-. .....+..+.+. +..+..|+.+...+. ..|+|
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d-~~v~~~DkLTYA-gn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~~~D~V 78 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPD-DHVVNLDKLTYA-GNLENLADVEDSPRYRFVQGDICDRELVDRLFKEYQPDAV 78 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCC-ceEEEEeccccc-CCHHHHHhhhcCCCceEEeccccCHHHHHHHHHhcCCCeE
Confidence 57999999999999999999998665 778888763211 112233333331 122334555432222 34899
Q ss_pred EEeccccCcc---hhHHHHhHhhHHHHHHHHHHHhhCCC
Q psy897 86 FIFLATLRFD---EELKIAIRTNICATQTVVKLAKQCPH 121 (125)
Q Consensus 86 ih~a~~~~~~---~~~~~~~~~Nv~g~~~l~~~~~~~~~ 121 (125)
+|+||-+.++ .++...+++|+.||.+|++++++.-.
T Consensus 79 vhfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~ 117 (340)
T COG1088 79 VHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWG 117 (340)
T ss_pred EEechhccccccccChhhhhhcchHHHHHHHHHHHHhcc
Confidence 9999998666 46788899999999999999998653
No 16
>PLN02206 UDP-glucuronate decarboxylase
Probab=99.61 E-value=4e-15 Score=109.48 Aligned_cols=104 Identities=24% Similarity=0.293 Sum_probs=69.7
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhc--cCChhhhhhhhcCccCCCeEEEe
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDN--EGPIFKDFANLVRLKTQRIRFIF 88 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~l~~~~~Vih~ 88 (125)
.++|+||||||+||||++|++.|+++ +++|+++++..... .......... ...+..|+.+. .+...|+|||+
T Consensus 117 ~~~~kILVTGatGfIGs~Lv~~Ll~~---G~~V~~ld~~~~~~--~~~~~~~~~~~~~~~i~~D~~~~-~l~~~D~ViHl 190 (442)
T PLN02206 117 RKGLRVVVTGGAGFVGSHLVDRLMAR---GDSVIVVDNFFTGR--KENVMHHFSNPNFELIRHDVVEP-ILLEVDQIYHL 190 (442)
T ss_pred cCCCEEEEECcccHHHHHHHHHHHHC---cCEEEEEeCCCccc--hhhhhhhccCCceEEEECCccCh-hhcCCCEEEEe
Confidence 35689999999999999999999998 79999998754321 1111111110 01111222221 11134899999
Q ss_pred ccccC---cchhHHHHhHhhHHHHHHHHHHHhhCC
Q psy897 89 LATLR---FDEELKIAIRTNICATQTVVKLAKQCP 120 (125)
Q Consensus 89 a~~~~---~~~~~~~~~~~Nv~g~~~l~~~~~~~~ 120 (125)
|+... ...++...+++|+.|+.+++++|++.+
T Consensus 191 Aa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g 225 (442)
T PLN02206 191 ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG 225 (442)
T ss_pred eeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99753 223567788999999999999998865
No 17
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=99.59 E-value=7.1e-15 Score=108.01 Aligned_cols=102 Identities=23% Similarity=0.289 Sum_probs=68.7
Q ss_pred CceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhh--ccCChhhhhhhhcCccCCCeEEEecc
Q psy897 13 DGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLD--NEGPIFKDFANLVRLKTQRIRFIFLA 90 (125)
Q Consensus 13 ~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~l~~~~~Vih~a~ 90 (125)
.|+|+||||+||||++|++.|+++ |++|++++|...... ........ ....+..|+.+. .+...|+|||+|+
T Consensus 120 ~mkILVTGatGFIGs~Lv~~Ll~~---G~~V~~ldr~~~~~~--~~~~~~~~~~~~~~~~~Di~~~-~~~~~D~ViHlAa 193 (436)
T PLN02166 120 RLRIVVTGGAGFVGSHLVDKLIGR---GDEVIVIDNFFTGRK--ENLVHLFGNPRFELIRHDVVEP-ILLEVDQIYHLAC 193 (436)
T ss_pred CCEEEEECCccHHHHHHHHHHHHC---CCEEEEEeCCCCccH--hHhhhhccCCceEEEECccccc-cccCCCEEEECce
Confidence 478999999999999999999998 799999998543211 11111111 001111233221 1113489999999
Q ss_pred ccC---cchhHHHHhHhhHHHHHHHHHHHhhCC
Q psy897 91 TLR---FDEELKIAIRTNICATQTVVKLAKQCP 120 (125)
Q Consensus 91 ~~~---~~~~~~~~~~~Nv~g~~~l~~~~~~~~ 120 (125)
... ...++...+++|+.|+.+++++|++.+
T Consensus 194 ~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g 226 (436)
T PLN02166 194 PASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG 226 (436)
T ss_pred eccchhhccCHHHHHHHHHHHHHHHHHHHHHhC
Confidence 753 223567788999999999999998864
No 18
>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.58 E-value=5.2e-15 Score=104.95 Aligned_cols=104 Identities=27% Similarity=0.312 Sum_probs=79.8
Q ss_pred ceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhc-----------cCChhhhhhhh-cCcc-
Q psy897 14 GVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDN-----------EGPIFKDFANL-VRLK- 80 (125)
Q Consensus 14 ~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~-----------~~~~~~~l~~~-~~l~- 80 (125)
+++|+||||||+|.+|+.+|+.+ ++ .+|+|+.|..++.....++++.+.. ..++.+|+.++ ++++
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~-~~-~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~ 78 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDR-SD-AKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSE 78 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhc-CC-CcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCH
Confidence 47999999999999999999998 33 7999999988765555566543331 11233455432 2333
Q ss_pred --------CCCeEEEeccccCcchhHHHHhHhhHHHHHHHHHHHhhC
Q psy897 81 --------TQRIRFIFLATLRFDEELKIAIRTNICATQTVVKLAKQC 119 (125)
Q Consensus 81 --------~~~~Vih~a~~~~~~~~~~~~~~~Nv~g~~~l~~~~~~~ 119 (125)
..|.|||+||.+++-.++.+....|+.||..+++.|..-
T Consensus 79 ~~~~~La~~vD~I~H~gA~Vn~v~pYs~L~~~NVlGT~evlrLa~~g 125 (382)
T COG3320 79 RTWQELAENVDLIIHNAALVNHVFPYSELRGANVLGTAEVLRLAATG 125 (382)
T ss_pred HHHHHHhhhcceEEecchhhcccCcHHHhcCcchHhHHHHHHHHhcC
Confidence 357999999999999999999999999999999988653
No 19
>PLN02572 UDP-sulfoquinovose synthase
Probab=99.58 E-value=1.3e-14 Score=106.75 Aligned_cols=112 Identities=15% Similarity=0.127 Sum_probs=71.2
Q ss_pred ccccccCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCC-C-------------HHHHHHHhh---h-ccC
Q psy897 6 TVEDFYKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGV-S-------------PQERIEKML---D-NEG 67 (125)
Q Consensus 6 ~~~~~~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~-~-------------~~~~~~~~~---~-~~~ 67 (125)
..+..+++|+||||||+||||++|++.|+++ |++|+++++..... . ....+..+. . ...
T Consensus 40 ~~~~~~~~k~VLVTGatGfIGs~Lv~~L~~~---G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~ 116 (442)
T PLN02572 40 GSSSSSKKKKVMVIGGDGYCGWATALHLSKR---GYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIE 116 (442)
T ss_pred CCCccccCCEEEEECCCcHHHHHHHHHHHHC---CCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcce
Confidence 3344577899999999999999999999998 79999987532110 0 011111111 0 001
Q ss_pred ChhhhhhhhcCcc------CCCeEEEeccccCcc------hhHHHHhHhhHHHHHHHHHHHhhCC
Q psy897 68 PIFKDFANLVRLK------TQRIRFIFLATLRFD------EELKIAIRTNICATQTVVKLAKQCP 120 (125)
Q Consensus 68 ~~~~~l~~~~~l~------~~~~Vih~a~~~~~~------~~~~~~~~~Nv~g~~~l~~~~~~~~ 120 (125)
.+..|+.+...+. ..|+|||+|+..... .++...+++|+.|+.+++++|++.+
T Consensus 117 ~v~~Dl~d~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~g 181 (442)
T PLN02572 117 LYVGDICDFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFA 181 (442)
T ss_pred EEECCCCCHHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhC
Confidence 2223444432222 248999999875321 1234556899999999999998764
No 20
>PLN02427 UDP-apiose/xylose synthase
Probab=99.58 E-value=3.1e-15 Score=108.20 Aligned_cols=105 Identities=17% Similarity=0.158 Sum_probs=68.4
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHH-----hhhccCChhhhhhhhcCcc----C
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEK-----MLDNEGPIFKDFANLVRLK----T 81 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~-----~~~~~~~~~~~l~~~~~l~----~ 81 (125)
.+.|+|+||||+||||++|++.|+++ ++++|++++|+..... .... +......+..|+.+...+. .
T Consensus 12 ~~~~~VlVTGgtGfIGs~lv~~L~~~--~g~~V~~l~r~~~~~~---~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~ 86 (386)
T PLN02427 12 IKPLTICMIGAGGFIGSHLCEKLMTE--TPHKVLALDVYNDKIK---HLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKM 86 (386)
T ss_pred ccCcEEEEECCcchHHHHHHHHHHhc--CCCEEEEEecCchhhh---hhhccccccCCCCeEEEEcCCCChHHHHHHhhc
Confidence 45678999999999999999999997 2489999988643211 1100 0000011123343322221 3
Q ss_pred CCeEEEeccccCc---chhHHHHhHhhHHHHHHHHHHHhhCC
Q psy897 82 QRIRFIFLATLRF---DEELKIAIRTNICATQTVVKLAKQCP 120 (125)
Q Consensus 82 ~~~Vih~a~~~~~---~~~~~~~~~~Nv~g~~~l~~~~~~~~ 120 (125)
.|+|||+||.... ..++...+..|+.++.+++++|++..
T Consensus 87 ~d~ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~ 128 (386)
T PLN02427 87 ADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN 128 (386)
T ss_pred CCEEEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcC
Confidence 4899999997532 23344566789999999999998754
No 21
>PLN02214 cinnamoyl-CoA reductase
Probab=99.58 E-value=8e-15 Score=104.67 Aligned_cols=107 Identities=13% Similarity=0.161 Sum_probs=72.8
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhh---ccCChhhhhhhhcCcc----CCC
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLD---NEGPIFKDFANLVRLK----TQR 83 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~l~~~~~l~----~~~ 83 (125)
.++|+|+||||+||||++|+++|+++ |++|++++|+...... .....+.. ....+..|+.+...+. ..|
T Consensus 8 ~~~~~vlVTGatGfIG~~l~~~L~~~---G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d 83 (342)
T PLN02214 8 PAGKTVCVTGAGGYIASWIVKILLER---GYTVKGTVRNPDDPKN-THLRELEGGKERLILCKADLQDYEALKAAIDGCD 83 (342)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC---cCEEEEEeCCchhhhH-HHHHHhhCCCCcEEEEecCcCChHHHHHHHhcCC
Confidence 45789999999999999999999998 7999999986543211 11111111 0011123443322221 348
Q ss_pred eEEEeccccCcchhHHHHhHhhHHHHHHHHHHHhhCCCCcC
Q psy897 84 IRFIFLATLRFDEELKIAIRTNICATQTVVKLAKQCPHLRL 124 (125)
Q Consensus 84 ~Vih~a~~~~~~~~~~~~~~~Nv~g~~~l~~~~~~~~~~~~ 124 (125)
+|||+||... .++...+++|+.|+.+++++|++.+ +++
T Consensus 84 ~Vih~A~~~~--~~~~~~~~~nv~gt~~ll~aa~~~~-v~r 121 (342)
T PLN02214 84 GVFHTASPVT--DDPEQMVEPAVNGAKFVINAAAEAK-VKR 121 (342)
T ss_pred EEEEecCCCC--CCHHHHHHHHHHHHHHHHHHHHhcC-CCE
Confidence 9999999763 3457788999999999999998764 444
No 22
>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional
Probab=99.57 E-value=2.6e-14 Score=100.34 Aligned_cols=89 Identities=20% Similarity=0.153 Sum_probs=62.6
Q ss_pred ceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCC----CCHHHHHHHhhhccCChhhhhhhhcCccCCCeEEEec
Q psy897 14 GVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKG----VSPQERIEKMLDNEGPIFKDFANLVRLKTQRIRFIFL 89 (125)
Q Consensus 14 ~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~----~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~Vih~a 89 (125)
|+||||||+||||+++++.|+++ + +|++++|.... ......+.+.+. .. ..|+|||||
T Consensus 1 m~iLVtG~~GfiGs~l~~~L~~~---g-~V~~~~~~~~~~~~Dl~d~~~~~~~~~-----------~~---~~D~Vih~A 62 (299)
T PRK09987 1 MNILLFGKTGQVGWELQRALAPL---G-NLIALDVHSTDYCGDFSNPEGVAETVR-----------KI---RPDVIVNAA 62 (299)
T ss_pred CeEEEECCCCHHHHHHHHHhhcc---C-CEEEeccccccccCCCCCHHHHHHHHH-----------hc---CCCEEEECC
Confidence 57999999999999999999988 5 68888875321 000111111111 00 138999999
Q ss_pred cccCcc---hhHHHHhHhhHHHHHHHHHHHhhCC
Q psy897 90 ATLRFD---EELKIAIRTNICATQTVVKLAKQCP 120 (125)
Q Consensus 90 ~~~~~~---~~~~~~~~~Nv~g~~~l~~~~~~~~ 120 (125)
|..... .++...+++|+.++.+++++|++.+
T Consensus 63 a~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~g 96 (299)
T PRK09987 63 AHTAVDKAESEPEFAQLLNATSVEAIAKAANEVG 96 (299)
T ss_pred ccCCcchhhcCHHHHHHHHHHHHHHHHHHHHHcC
Confidence 987543 3456677899999999999998864
No 23
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=99.57 E-value=1.7e-14 Score=102.84 Aligned_cols=103 Identities=17% Similarity=0.207 Sum_probs=69.0
Q ss_pred ceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhh--------hccCChhhhhhhhcCcc-----
Q psy897 14 GVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKML--------DNEGPIFKDFANLVRLK----- 80 (125)
Q Consensus 14 ~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~--------~~~~~~~~~l~~~~~l~----- 80 (125)
|++|||||+||||++|+++|++. |++|++++|.+.... ........ .....+..|+++...+.
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~---G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~ 76 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEK---GYEVHGLIRRSSSFN-TQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDE 76 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHC---CCEEEEEecCCcccc-hhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHh
Confidence 58999999999999999999998 799999998754211 01111110 00012223454432221
Q ss_pred -CCCeEEEeccccCcc---hhHHHHhHhhHHHHHHHHHHHhhCC
Q psy897 81 -TQRIRFIFLATLRFD---EELKIAIRTNICATQTVVKLAKQCP 120 (125)
Q Consensus 81 -~~~~Vih~a~~~~~~---~~~~~~~~~Nv~g~~~l~~~~~~~~ 120 (125)
..|+|||+||..... ..+...+++|+.|+.+++++|++.+
T Consensus 77 ~~~d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~ 120 (343)
T TIGR01472 77 IKPTEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLG 120 (343)
T ss_pred CCCCEEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhC
Confidence 248999999986432 2345666889999999999998754
No 24
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=99.56 E-value=2.1e-14 Score=101.57 Aligned_cols=110 Identities=15% Similarity=0.178 Sum_probs=71.9
Q ss_pred CCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhh---ccCChhhhhhhhcCcc----CCCe
Q psy897 12 KDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLD---NEGPIFKDFANLVRLK----TQRI 84 (125)
Q Consensus 12 ~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~l~~~~~l~----~~~~ 84 (125)
++|+++||||+||||++++++|++. |++|++++|+............... ....+..|+.+...++ ..|+
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~---G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~ 80 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFR---GYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCET 80 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHC---CCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCE
Confidence 3689999999999999999999998 7999988886553211111111000 0011123444332221 2389
Q ss_pred EEEeccccCcc---hhHHHHhHhhHHHHHHHHHHHhhCCCCcC
Q psy897 85 RFIFLATLRFD---EELKIAIRTNICATQTVVKLAKQCPHLRL 124 (125)
Q Consensus 85 Vih~a~~~~~~---~~~~~~~~~Nv~g~~~l~~~~~~~~~~~~ 124 (125)
|||+||..... .++...+++|+.|+.+++++|.+....++
T Consensus 81 vih~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~ 123 (325)
T PLN02989 81 VFHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKR 123 (325)
T ss_pred EEEeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceE
Confidence 99999975322 34567889999999999999987533333
No 25
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=99.55 E-value=1.7e-15 Score=105.15 Aligned_cols=107 Identities=22% Similarity=0.327 Sum_probs=66.3
Q ss_pred EEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCC-HHHHHHHhhhc--c----CChhhhhhhhcCcc------CC
Q psy897 16 IFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVS-PQERIEKMLDN--E----GPIFKDFANLVRLK------TQ 82 (125)
Q Consensus 16 vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~-~~~~~~~~~~~--~----~~~~~~l~~~~~l~------~~ 82 (125)
||||||+|.||+.|+++|++. +...++++++++.... ....+...... . .++..|+++...+. .+
T Consensus 1 VLVTGa~GSIGseL~rql~~~--~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~p 78 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRY--GPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKP 78 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCC--B-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-
T ss_pred CEEEccccHHHHHHHHHHHhc--CCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCC
Confidence 799999999999999999998 2478999999765321 11122111110 0 12245665543322 45
Q ss_pred CeEEEeccccCcc---hhHHHHhHhhHHHHHHHHHHHhhCCCCcCC
Q psy897 83 RIRFIFLATLRFD---EELKIAIRTNICATQTVVKLAKQCPHLRLF 125 (125)
Q Consensus 83 ~~Vih~a~~~~~~---~~~~~~~~~Nv~g~~~l~~~~~~~~~~~~~ 125 (125)
|+|+|+||.-... ..+.+++++|+.||.+++++|.+.. +++|
T Consensus 79 diVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~-v~~~ 123 (293)
T PF02719_consen 79 DIVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHG-VERF 123 (293)
T ss_dssp SEEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT--SEE
T ss_pred CEEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcC-CCEE
Confidence 8999999996433 5678889999999999999999874 6554
No 26
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=99.55 E-value=5.5e-15 Score=113.37 Aligned_cols=105 Identities=14% Similarity=0.152 Sum_probs=71.1
Q ss_pred ccCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhccCChhhhhhhhc-----CccCCCe
Q psy897 10 FYKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDNEGPIFKDFANLV-----RLKTQRI 84 (125)
Q Consensus 10 ~~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----~l~~~~~ 84 (125)
++++|+|+||||+||||++|+++|+++ ++++|++++|...... ..... .....+..|+++.. .++..|+
T Consensus 312 ~~~~~~VLVTGatGFIGs~Lv~~Ll~~--~g~~V~~l~r~~~~~~---~~~~~-~~~~~~~gDl~d~~~~l~~~l~~~D~ 385 (660)
T PRK08125 312 AKRRTRVLILGVNGFIGNHLTERLLRD--DNYEVYGLDIGSDAIS---RFLGH-PRFHFVEGDISIHSEWIEYHIKKCDV 385 (660)
T ss_pred hhcCCEEEEECCCchHHHHHHHHHHhC--CCcEEEEEeCCchhhh---hhcCC-CceEEEeccccCcHHHHHHHhcCCCE
Confidence 577899999999999999999999985 2699999998654211 11000 00011122333210 1113489
Q ss_pred EEEeccccCc---chhHHHHhHhhHHHHHHHHHHHhhCC
Q psy897 85 RFIFLATLRF---DEELKIAIRTNICATQTVVKLAKQCP 120 (125)
Q Consensus 85 Vih~a~~~~~---~~~~~~~~~~Nv~g~~~l~~~~~~~~ 120 (125)
|||+||.... ..++...+++|+.++.+++++|++.+
T Consensus 386 ViHlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~ 424 (660)
T PRK08125 386 VLPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYN 424 (660)
T ss_pred EEECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhcC
Confidence 9999997642 33456678999999999999999864
No 27
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=99.55 E-value=1.4e-14 Score=103.35 Aligned_cols=99 Identities=14% Similarity=0.166 Sum_probs=66.8
Q ss_pred ceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhh--ccCChhhhhh-hhcC----ccCCCeEE
Q psy897 14 GVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLD--NEGPIFKDFA-NLVR----LKTQRIRF 86 (125)
Q Consensus 14 ~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~l~-~~~~----l~~~~~Vi 86 (125)
|+|+||||+||||++|+++|+++ ++++|++++|.... ...... ....+..|+. +... ++..|+||
T Consensus 2 ~~ilVtGatGfiGs~l~~~L~~~--~~~~V~~~~r~~~~------~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~d~Vi 73 (347)
T PRK11908 2 KKVLILGVNGFIGHHLSKRILET--TDWEVYGMDMQTDR------LGDLVNHPRMHFFEGDITINKEWIEYHVKKCDVIL 73 (347)
T ss_pred cEEEEECCCcHHHHHHHHHHHhC--CCCeEEEEeCcHHH------HHHhccCCCeEEEeCCCCCCHHHHHHHHcCCCEEE
Confidence 68999999999999999999986 25899999885431 111111 0011122332 1111 11348999
Q ss_pred EeccccCc---chhHHHHhHhhHHHHHHHHHHHhhCC
Q psy897 87 IFLATLRF---DEELKIAIRTNICATQTVVKLAKQCP 120 (125)
Q Consensus 87 h~a~~~~~---~~~~~~~~~~Nv~g~~~l~~~~~~~~ 120 (125)
|+||.... ..++...+++|+.++.+++++|++.+
T Consensus 74 H~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~ 110 (347)
T PRK11908 74 PLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG 110 (347)
T ss_pred ECcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhcC
Confidence 99997532 24566778999999999999998864
No 28
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=99.55 E-value=4.6e-14 Score=108.42 Aligned_cols=115 Identities=20% Similarity=0.245 Sum_probs=73.8
Q ss_pred cccCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHh--hhccCChhhhhhhhcCc------c
Q psy897 9 DFYKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKM--LDNEGPIFKDFANLVRL------K 80 (125)
Q Consensus 9 ~~~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~l------~ 80 (125)
.+++.|+||||||+||||+++++.|+++++ +++|+++++....... ..+... ......+..|+.+...+ .
T Consensus 2 ~~~~~~~VLVTGatGfIG~~lv~~Ll~~g~-~~~V~~~d~~~~~~~~-~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~ 79 (668)
T PLN02260 2 ATYEPKNILITGAAGFIASHVANRLIRNYP-DYKIVVLDKLDYCSNL-KNLNPSKSSPNFKFVKGDIASADLVNYLLITE 79 (668)
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHhCC-CCEEEEEeCCCccchh-hhhhhcccCCCeEEEECCCCChHHHHHHHhhc
Confidence 356789999999999999999999998733 4789988874321111 111100 00001112233221111 1
Q ss_pred CCCeEEEeccccCcc---hhHHHHhHhhHHHHHHHHHHHhhCCCCcCC
Q psy897 81 TQRIRFIFLATLRFD---EELKIAIRTNICATQTVVKLAKQCPHLRLF 125 (125)
Q Consensus 81 ~~~~Vih~a~~~~~~---~~~~~~~~~Nv~g~~~l~~~~~~~~~~~~~ 125 (125)
..|+|||+||..... .++...+++|+.|+.+++++|++.+.+++|
T Consensus 80 ~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~ 127 (668)
T PLN02260 80 GIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRF 127 (668)
T ss_pred CCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEE
Confidence 238999999987543 234567789999999999999987656654
No 29
>PLN02778 3,5-epimerase/4-reductase
Probab=99.54 E-value=5.6e-14 Score=98.70 Aligned_cols=88 Identities=15% Similarity=0.144 Sum_probs=62.7
Q ss_pred CceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhccCChhhhhhhhcCccCCCeEEEecccc
Q psy897 13 DGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDNEGPIFKDFANLVRLKTQRIRFIFLATL 92 (125)
Q Consensus 13 ~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~Vih~a~~~ 92 (125)
.|+||||||+||||++|++.|+++ +++|....+...+ ...+.. ++.+. .. |+|||+||..
T Consensus 9 ~~kiLVtG~tGfiG~~l~~~L~~~---g~~V~~~~~~~~~---~~~v~~----------~l~~~-~~---D~ViH~Aa~~ 68 (298)
T PLN02778 9 TLKFLIYGKTGWIGGLLGKLCQEQ---GIDFHYGSGRLEN---RASLEA----------DIDAV-KP---THVFNAAGVT 68 (298)
T ss_pred CCeEEEECCCCHHHHHHHHHHHhC---CCEEEEecCccCC---HHHHHH----------HHHhc-CC---CEEEECCccc
Confidence 378999999999999999999998 7888754322211 111111 12211 22 8999999986
Q ss_pred Cc------chhHHHHhHhhHHHHHHHHHHHhhCC
Q psy897 93 RF------DEELKIAIRTNICATQTVVKLAKQCP 120 (125)
Q Consensus 93 ~~------~~~~~~~~~~Nv~g~~~l~~~~~~~~ 120 (125)
.. ..++...+++|+.|+.+++++|++.+
T Consensus 69 ~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~g 102 (298)
T PLN02778 69 GRPNVDWCESHKVETIRANVVGTLTLADVCRERG 102 (298)
T ss_pred CCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhC
Confidence 31 23567788999999999999998864
No 30
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=99.54 E-value=2.4e-14 Score=100.23 Aligned_cols=100 Identities=22% Similarity=0.285 Sum_probs=67.6
Q ss_pred eEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhccCChhhhhhhhc----CccCC-CeEEEec
Q psy897 15 VIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDNEGPIFKDFANLV----RLKTQ-RIRFIFL 89 (125)
Q Consensus 15 ~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~l~~~~----~l~~~-~~Vih~a 89 (125)
+||||||+||||++|+++|++. |++|+.++|......... ... .....++.+.. ..... |+|||+|
T Consensus 2 ~ILVtG~tGfiG~~l~~~L~~~---g~~V~~~~r~~~~~~~~~--~~~----~~~~~d~~~~~~~~~~~~~~~d~vih~a 72 (314)
T COG0451 2 RILVTGGAGFIGSHLVERLLAA---GHDVRGLDRLRDGLDPLL--SGV----EFVVLDLTDRDLVDELAKGVPDAVIHLA 72 (314)
T ss_pred eEEEEcCcccHHHHHHHHHHhC---CCeEEEEeCCCccccccc--ccc----ceeeecccchHHHHHHHhcCCCEEEEcc
Confidence 4999999999999999999998 899999999655322111 000 11111111110 11122 7999999
Q ss_pred cccCcchh----HHHHhHhhHHHHHHHHHHHhhCCCCcC
Q psy897 90 ATLRFDEE----LKIAIRTNICATQTVVKLAKQCPHLRL 124 (125)
Q Consensus 90 ~~~~~~~~----~~~~~~~Nv~g~~~l~~~~~~~~~~~~ 124 (125)
+....... +...+++|+.++.+++++|++ ..+++
T Consensus 73 a~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~-~~~~~ 110 (314)
T COG0451 73 AQSSVPDSNASDPAEFLDVNVDGTLNLLEAARA-AGVKR 110 (314)
T ss_pred ccCchhhhhhhCHHHHHHHHHHHHHHHHHHHHH-cCCCe
Confidence 99754322 345789999999999999998 34454
No 31
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=99.53 E-value=2.2e-14 Score=102.62 Aligned_cols=108 Identities=20% Similarity=0.259 Sum_probs=67.7
Q ss_pred CceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhh--ccCChhhhhhhhcCcc----CCCeEE
Q psy897 13 DGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLD--NEGPIFKDFANLVRLK----TQRIRF 86 (125)
Q Consensus 13 ~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~l~----~~~~Vi 86 (125)
+++||||||+||||++++++|+++ |++|++++|+.... ......+.. ....+..|+.+...+. ..|+||
T Consensus 10 ~~~vLVtG~~GfIG~~l~~~L~~~---G~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi 84 (353)
T PLN02896 10 TGTYCVTGATGYIGSWLVKLLLQR---GYTVHATLRDPAKS--LHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGCDGVF 84 (353)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC---CCEEEEEeCChHHH--HHHHHhhccCCeEEEEECCCCCHHHHHHHHcCCCEEE
Confidence 679999999999999999999998 79999988864321 111111110 0011122333221111 238999
Q ss_pred EeccccCcc-----hhHHH-----HhHhhHHHHHHHHHHHhhCCCCcCC
Q psy897 87 IFLATLRFD-----EELKI-----AIRTNICATQTVVKLAKQCPHLRLF 125 (125)
Q Consensus 87 h~a~~~~~~-----~~~~~-----~~~~Nv~g~~~l~~~~~~~~~~~~~ 125 (125)
|+||..... .++.. .+++|+.|+.+++++|++...+++|
T Consensus 85 h~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~ 133 (353)
T PLN02896 85 HVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRV 133 (353)
T ss_pred ECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEE
Confidence 999986322 12332 3455679999999999876545543
No 32
>PLN02583 cinnamoyl-CoA reductase
Probab=99.52 E-value=6.8e-14 Score=98.12 Aligned_cols=109 Identities=12% Similarity=0.123 Sum_probs=70.9
Q ss_pred CceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhh---hccCChhhhhhhhcCcc----CCCeE
Q psy897 13 DGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKML---DNEGPIFKDFANLVRLK----TQRIR 85 (125)
Q Consensus 13 ~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~l~----~~~~V 85 (125)
+++++||||+||||++++++|+++ |++|++++|+.........+.... .....+..|+.+...+. ..+.|
T Consensus 6 ~k~vlVTGatG~IG~~lv~~Ll~~---G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~~~d~v 82 (297)
T PLN02583 6 SKSVCVMDASGYVGFWLVKRLLSR---GYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALKGCSGL 82 (297)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhC---CCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHcCCCEE
Confidence 678999999999999999999998 899999988543221111122211 00011223444332221 33688
Q ss_pred EEeccccC-cchhHHHHhHhhHHHHHHHHHHHhhCCCCcC
Q psy897 86 FIFLATLR-FDEELKIAIRTNICATQTVVKLAKQCPHLRL 124 (125)
Q Consensus 86 ih~a~~~~-~~~~~~~~~~~Nv~g~~~l~~~~~~~~~~~~ 124 (125)
+|+++... ....++..+++|+.|+.+++++|.+...+++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r 122 (297)
T PLN02583 83 FCCFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEK 122 (297)
T ss_pred EEeCccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCccE
Confidence 99876543 2233567889999999999999987644444
No 33
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.
Probab=99.52 E-value=6.5e-14 Score=97.90 Aligned_cols=90 Identities=23% Similarity=0.315 Sum_probs=64.2
Q ss_pred ceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhccCChhhhhhhhcCccCCCeEEEeccccC
Q psy897 14 GVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDNEGPIFKDFANLVRLKTQRIRFIFLATLR 93 (125)
Q Consensus 14 ~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~Vih~a~~~~ 93 (125)
|+|||||++|++|++|.+.|.+. +++++.+.|...+....+.+.++.. +.. +|+||||||.++
T Consensus 1 MriLI~GasG~lG~~l~~~l~~~---~~~v~~~~r~~~dl~d~~~~~~~~~-------~~~-------pd~Vin~aa~~~ 63 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKER---GYEVIATSRSDLDLTDPEAVAKLLE-------AFK-------PDVVINCAAYTN 63 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTT---SEEEEEESTTCS-TTSHHHHHHHHH-------HH---------SEEEE------
T ss_pred CEEEEECCCCHHHHHHHHHHhhC---CCEEEEeCchhcCCCCHHHHHHHHH-------HhC-------CCeEeccceeec
Confidence 68999999999999999999887 7899999887554443344444333 111 289999999986
Q ss_pred cc---hhHHHHhHhhHHHHHHHHHHHhhCC
Q psy897 94 FD---EELKIAIRTNICATQTVVKLAKQCP 120 (125)
Q Consensus 94 ~~---~~~~~~~~~Nv~g~~~l~~~~~~~~ 120 (125)
.+ .+++.++++|+.++.+|+++|++..
T Consensus 64 ~~~ce~~p~~a~~iN~~~~~~la~~~~~~~ 93 (286)
T PF04321_consen 64 VDACEKNPEEAYAINVDATKNLAEACKERG 93 (286)
T ss_dssp HHHHHHSHHHHHHHHTHHHHHHHHHHHHCT
T ss_pred HHhhhhChhhhHHHhhHHHHHHHHHHHHcC
Confidence 54 4678899999999999999998754
No 34
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=99.51 E-value=1e-13 Score=98.64 Aligned_cols=107 Identities=14% Similarity=0.103 Sum_probs=70.2
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCC--CHHHHHHH-h---hhccCChhhhhhhhcCcc----
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGV--SPQERIEK-M---LDNEGPIFKDFANLVRLK---- 80 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~--~~~~~~~~-~---~~~~~~~~~~l~~~~~l~---- 80 (125)
.++|++|||||+||||++|+++|++. |++|++++|.+... .....+.. . ......+..|+.+...+.
T Consensus 4 ~~~~~vlVTGatGfiG~~l~~~L~~~---G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~ 80 (340)
T PLN02653 4 PPRKVALITGITGQDGSYLTEFLLSK---GYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLD 80 (340)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHC---CCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHH
Confidence 45789999999999999999999998 79999998865421 11111100 0 000011122333322221
Q ss_pred --CCCeEEEeccccCcc---hhHHHHhHhhHHHHHHHHHHHhhCC
Q psy897 81 --TQRIRFIFLATLRFD---EELKIAIRTNICATQTVVKLAKQCP 120 (125)
Q Consensus 81 --~~~~Vih~a~~~~~~---~~~~~~~~~Nv~g~~~l~~~~~~~~ 120 (125)
..|+|||+||..... .++...+++|+.|+.+++++|++..
T Consensus 81 ~~~~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~ 125 (340)
T PLN02653 81 DIKPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHG 125 (340)
T ss_pred HcCCCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhc
Confidence 248999999986432 3456677899999999999998754
No 35
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=99.50 E-value=7.4e-14 Score=99.07 Aligned_cols=106 Identities=25% Similarity=0.290 Sum_probs=70.4
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhh--ccCChhhhhhhhcCcc----CCCe
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLD--NEGPIFKDFANLVRLK----TQRI 84 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~l~----~~~~ 84 (125)
+++|+++||||+||||++++++|++++ ++++|++++|+... ...+..... ....+..|+.+...+. ..|+
T Consensus 2 ~~~k~vLVTGatG~IG~~l~~~L~~~g-~~~~V~~~~r~~~~---~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~iD~ 77 (324)
T TIGR03589 2 FNNKSILITGGTGSFGKAFISRLLENY-NPKKIIIYSRDELK---QWEMQQKFPAPCLRFFIGDVRDKERLTRALRGVDY 77 (324)
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHhC-CCcEEEEEcCChhH---HHHHHHHhCCCcEEEEEccCCCHHHHHHHHhcCCE
Confidence 468999999999999999999999982 12789888876432 111211111 0011223444432222 2489
Q ss_pred EEEeccccCc---chhHHHHhHhhHHHHHHHHHHHhhCC
Q psy897 85 RFIFLATLRF---DEELKIAIRTNICATQTVVKLAKQCP 120 (125)
Q Consensus 85 Vih~a~~~~~---~~~~~~~~~~Nv~g~~~l~~~~~~~~ 120 (125)
|||+||.... ..++...+++|+.|+.+++++|++.+
T Consensus 78 Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~ 116 (324)
T TIGR03589 78 VVHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNG 116 (324)
T ss_pred EEECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcC
Confidence 9999997532 23456788999999999999998753
No 36
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=99.49 E-value=1.1e-13 Score=98.93 Aligned_cols=101 Identities=19% Similarity=0.248 Sum_probs=63.4
Q ss_pred ceEEEecCccchhHHHHHHHHHhCCCccE-EEEEecCCCCCCHHHHHHHhhh--ccCChhhhhhhhcCcc------CCCe
Q psy897 14 GVIFLTGGTGFMGKVLLDTLLRRFPSIHS-IYILVRERKGVSPQERIEKMLD--NEGPIFKDFANLVRLK------TQRI 84 (125)
Q Consensus 14 ~~vlitG~~G~iG~~i~~~l~~~~~~~~~-v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~l~------~~~~ 84 (125)
++++||||+||||+++++.|+++ ++. +.++++....... ........ ....+..|+.+...+. ..|+
T Consensus 2 ~~vlVtGatGfIG~~l~~~L~~~---g~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~ 77 (355)
T PRK10217 2 RKILITGGAGFIGSALVRYIINE---TSDAVVVVDKLTYAGNL-MSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDC 77 (355)
T ss_pred cEEEEEcCCcHHHHHHHHHHHHc---CCCEEEEEecCccccch-hhhhhcccCCceEEEECCCcChHHHHHHHhhcCCCE
Confidence 68999999999999999999998 565 4445553221111 11111100 0001122333322221 1489
Q ss_pred EEEeccccCcc---hhHHHHhHhhHHHHHHHHHHHhh
Q psy897 85 RFIFLATLRFD---EELKIAIRTNICATQTVVKLAKQ 118 (125)
Q Consensus 85 Vih~a~~~~~~---~~~~~~~~~Nv~g~~~l~~~~~~ 118 (125)
|||+||..... .++...+++|+.|+.+++++|++
T Consensus 78 Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~ 114 (355)
T PRK10217 78 VMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARA 114 (355)
T ss_pred EEECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHH
Confidence 99999986433 34577889999999999999976
No 37
>KOG1429|consensus
Probab=99.49 E-value=1.4e-14 Score=99.36 Aligned_cols=102 Identities=27% Similarity=0.415 Sum_probs=74.0
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhccCChh----hhhhhhcCccCCCeEE
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDNEGPIF----KDFANLVRLKTQRIRF 86 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~----~~l~~~~~l~~~~~Vi 86 (125)
..+++|+||||.||||+||+++|+.+ ++.|+++|.....- +..+..|.. .+.+ .++..+. +...|.|+
T Consensus 25 ~~~lrI~itGgaGFIgSHLvdkLm~e---gh~VIa~Dn~ftg~--k~n~~~~~~--~~~fel~~hdv~~pl-~~evD~Iy 96 (350)
T KOG1429|consen 25 SQNLRILITGGAGFIGSHLVDKLMTE---GHEVIALDNYFTGR--KENLEHWIG--HPNFELIRHDVVEPL-LKEVDQIY 96 (350)
T ss_pred CCCcEEEEecCcchHHHHHHHHHHhc---CCeEEEEecccccc--hhhcchhcc--CcceeEEEeechhHH-HHHhhhhh
Confidence 34689999999999999999999998 79999999865531 223334433 3333 2222210 00237999
Q ss_pred Eecccc---CcchhHHHHhHhhHHHHHHHHHHHhhCC
Q psy897 87 IFLATL---RFDEELKIAIRTNICATQTVVKLAKQCP 120 (125)
Q Consensus 87 h~a~~~---~~~~~~~~~~~~Nv~g~~~l~~~~~~~~ 120 (125)
|+|+.. .+..++-+.+..|+.++.+++-.|++..
T Consensus 97 hLAapasp~~y~~npvktIktN~igtln~lglakrv~ 133 (350)
T KOG1429|consen 97 HLAAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVG 133 (350)
T ss_pred hhccCCCCcccccCccceeeecchhhHHHHHHHHHhC
Confidence 999986 4556778888999999999999998865
No 38
>KOG1371|consensus
Probab=99.48 E-value=9.8e-14 Score=96.75 Aligned_cols=107 Identities=19% Similarity=0.263 Sum_probs=75.7
Q ss_pred CceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCC-CCCHHHHHHHhhhccC---ChhhhhhhhcCcc------CC
Q psy897 13 DGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERK-GVSPQERIEKMLDNEG---PIFKDFANLVRLK------TQ 82 (125)
Q Consensus 13 ~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~-~~~~~~~~~~~~~~~~---~~~~~l~~~~~l~------~~ 82 (125)
.++||||||+||||+|.+-+|+++ |+.|.++|+-.. ......+.+.+..... ....|+.+...++ ..
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~~~---gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~f 78 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALLKR---GYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEVKF 78 (343)
T ss_pred CcEEEEecCCcceehHHHHHHHhC---CCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhcCC
Confidence 578999999999999999999999 899999987333 2333445555443111 1123444433332 23
Q ss_pred CeEEEeccccCcc---hhHHHHhHhhHHHHHHHHHHHhhCCCCc
Q psy897 83 RIRFIFLATLRFD---EELKIAIRTNICATQTVVKLAKQCPHLR 123 (125)
Q Consensus 83 ~~Vih~a~~~~~~---~~~~~~~~~Nv~g~~~l~~~~~~~~~~~ 123 (125)
|.|+|+|+..... +.+...+..|+.||.++++.|++.. ++
T Consensus 79 d~V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~-~~ 121 (343)
T KOG1371|consen 79 DAVMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHN-VK 121 (343)
T ss_pred ceEEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcC-Cc
Confidence 7999999997543 3456677899999999999999887 44
No 39
>CHL00194 ycf39 Ycf39; Provisional
Probab=99.48 E-value=5.1e-14 Score=99.53 Aligned_cols=101 Identities=16% Similarity=0.180 Sum_probs=67.5
Q ss_pred ceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhccCChhhhhhhhcCc----cCCCeEEEec
Q psy897 14 GVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDNEGPIFKDFANLVRL----KTQRIRFIFL 89 (125)
Q Consensus 14 ~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l----~~~~~Vih~a 89 (125)
|+|+|||||||+|++++++|+++ |++|++++|+.... .......- ..+..|+.+...+ ...|+|||++
T Consensus 1 MkIlVtGatG~iG~~lv~~Ll~~---g~~V~~l~R~~~~~---~~l~~~~v--~~v~~Dl~d~~~l~~al~g~d~Vi~~~ 72 (317)
T CHL00194 1 MSLLVIGATGTLGRQIVRQALDE---GYQVRCLVRNLRKA---SFLKEWGA--ELVYGDLSLPETLPPSFKGVTAIIDAS 72 (317)
T ss_pred CEEEEECCCcHHHHHHHHHHHHC---CCeEEEEEcChHHh---hhHhhcCC--EEEECCCCCHHHHHHHHCCCCEEEECC
Confidence 57999999999999999999998 79999999975421 11111101 1222333332222 1337999987
Q ss_pred cccCcchhHHHHhHhhHHHHHHHHHHHhhCCCCcCC
Q psy897 90 ATLRFDEELKIAIRTNICATQTVVKLAKQCPHLRLF 125 (125)
Q Consensus 90 ~~~~~~~~~~~~~~~Nv~g~~~l~~~~~~~~~~~~~ 125 (125)
+... .++....++|+.++.+++++|++.+ +++|
T Consensus 73 ~~~~--~~~~~~~~~~~~~~~~l~~aa~~~g-vkr~ 105 (317)
T CHL00194 73 TSRP--SDLYNAKQIDWDGKLALIEAAKAAK-IKRF 105 (317)
T ss_pred CCCC--CCccchhhhhHHHHHHHHHHHHHcC-CCEE
Confidence 6432 2334466789999999999998864 5654
No 40
>PRK07201 short chain dehydrogenase; Provisional
Probab=99.48 E-value=9.9e-14 Score=106.16 Aligned_cols=106 Identities=25% Similarity=0.296 Sum_probs=69.2
Q ss_pred ceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhh-hccCChhhhhhhhc---------CccCCC
Q psy897 14 GVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKML-DNEGPIFKDFANLV---------RLKTQR 83 (125)
Q Consensus 14 ~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~---------~l~~~~ 83 (125)
|+|||||||||||++|++.|++. ..+++|++++|+............+. .....+..|+.+.. .+...|
T Consensus 1 m~ILVTGatGfIG~~lv~~Ll~~-~~g~~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l~~~D 79 (657)
T PRK07201 1 MRYFVTGGTGFIGRRLVSRLLDR-RREATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAELGDID 79 (657)
T ss_pred CeEEEeCCccHHHHHHHHHHHhc-CCCCEEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHhcCCC
Confidence 47999999999999999999952 12699999999543211111111110 10011223333210 011338
Q ss_pred eEEEeccccCcchhHHHHhHhhHHHHHHHHHHHhhCC
Q psy897 84 IRFIFLATLRFDEELKIAIRTNICATQTVVKLAKQCP 120 (125)
Q Consensus 84 ~Vih~a~~~~~~~~~~~~~~~Nv~g~~~l~~~~~~~~ 120 (125)
+||||||......++....++|+.|+.+++++|++.+
T Consensus 80 ~Vih~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~ 116 (657)
T PRK07201 80 HVVHLAAIYDLTADEEAQRAANVDGTRNVVELAERLQ 116 (657)
T ss_pred EEEECceeecCCCCHHHHHHHHhHHHHHHHHHHHhcC
Confidence 9999999876665666777899999999999998864
No 41
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=99.48 E-value=7e-14 Score=100.85 Aligned_cols=105 Identities=15% Similarity=0.170 Sum_probs=68.2
Q ss_pred CCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhccCChhhhhhhhcC----ccCCCeEEE
Q psy897 12 KDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDNEGPIFKDFANLVR----LKTQRIRFI 87 (125)
Q Consensus 12 ~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----l~~~~~Vih 87 (125)
++|+|+||||+||||+++++.|+++ |++|++++|........... .. .....|+.+... +...|+|||
T Consensus 20 ~~~~IlVtGgtGfIG~~l~~~L~~~---G~~V~~v~r~~~~~~~~~~~---~~--~~~~~Dl~d~~~~~~~~~~~D~Vih 91 (370)
T PLN02695 20 EKLRICITGAGGFIASHIARRLKAE---GHYIIASDWKKNEHMSEDMF---CH--EFHLVDLRVMENCLKVTKGVDHVFN 91 (370)
T ss_pred CCCEEEEECCccHHHHHHHHHHHhC---CCEEEEEEeccccccccccc---cc--eEEECCCCCHHHHHHHHhCCCEEEE
Confidence 3789999999999999999999998 79999999854321100000 00 111122222111 112389999
Q ss_pred eccccC---c-chhHHHHhHhhHHHHHHHHHHHhhCCCCcCC
Q psy897 88 FLATLR---F-DEELKIAIRTNICATQTVVKLAKQCPHLRLF 125 (125)
Q Consensus 88 ~a~~~~---~-~~~~~~~~~~Nv~g~~~l~~~~~~~~~~~~~ 125 (125)
+|+... . ...+...+..|+.++.+++++|++.+ +++|
T Consensus 92 ~Aa~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~-vk~~ 132 (370)
T PLN02695 92 LAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARING-VKRF 132 (370)
T ss_pred cccccCCccccccCchhhHHHHHHHHHHHHHHHHHhC-CCEE
Confidence 998752 1 12334566789999999999998763 4543
No 42
>PLN02686 cinnamoyl-CoA reductase
Probab=99.48 E-value=6.4e-14 Score=100.98 Aligned_cols=109 Identities=20% Similarity=0.242 Sum_probs=71.5
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhh---------hccCChhhhhhhhcCcc-
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKML---------DNEGPIFKDFANLVRLK- 80 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~---------~~~~~~~~~l~~~~~l~- 80 (125)
.++|+|+||||+||||++++++|+++ |++|+++.|+... ...+.... .....+..|+.+...+.
T Consensus 51 ~~~k~VLVTGatGfIG~~lv~~L~~~---G~~V~~~~r~~~~---~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~ 124 (367)
T PLN02686 51 AEARLVCVTGGVSFLGLAIVDRLLRH---GYSVRIAVDTQED---KEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHE 124 (367)
T ss_pred CCCCEEEEECCchHHHHHHHHHHHHC---CCEEEEEeCCHHH---HHHHHHHhhhccccccCCceEEEEcCCCCHHHHHH
Confidence 56899999999999999999999998 7999988775432 11111110 00011223444332221
Q ss_pred ---CCCeEEEeccccCcch---hHHHHhHhhHHHHHHHHHHHhhCCCCcCC
Q psy897 81 ---TQRIRFIFLATLRFDE---ELKIAIRTNICATQTVVKLAKQCPHLRLF 125 (125)
Q Consensus 81 ---~~~~Vih~a~~~~~~~---~~~~~~~~Nv~g~~~l~~~~~~~~~~~~~ 125 (125)
..|.|||+|+...... ......++|+.++.+++++|++..++++|
T Consensus 125 ~i~~~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~ 175 (367)
T PLN02686 125 AFDGCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKC 175 (367)
T ss_pred HHHhccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEE
Confidence 2379999999863221 12345578999999999999886556654
No 43
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=99.45 E-value=7e-13 Score=91.75 Aligned_cols=89 Identities=16% Similarity=0.205 Sum_probs=69.0
Q ss_pred ceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhccCChhhhhhhhcCccCCCeEEEeccccC
Q psy897 14 GVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDNEGPIFKDFANLVRLKTQRIRFIFLATLR 93 (125)
Q Consensus 14 ~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~Vih~a~~~~ 93 (125)
|++||||++|++|++|++.|. . +.+|+.+++...+....+.+.+.+.. . .+|+|||+|+++.
T Consensus 1 M~iLi~G~~GqLG~~L~~~l~-~---~~~v~a~~~~~~Ditd~~~v~~~i~~-------~-------~PDvVIn~AAyt~ 62 (281)
T COG1091 1 MKILITGANGQLGTELRRALP-G---EFEVIATDRAELDITDPDAVLEVIRE-------T-------RPDVVINAAAYTA 62 (281)
T ss_pred CcEEEEcCCChHHHHHHHHhC-C---CceEEeccCccccccChHHHHHHHHh-------h-------CCCEEEECccccc
Confidence 349999999999999999886 3 58999998877544434444444331 1 2289999999997
Q ss_pred cc---hhHHHHhHhhHHHHHHHHHHHhhCC
Q psy897 94 FD---EELKIAIRTNICATQTVVKLAKQCP 120 (125)
Q Consensus 94 ~~---~~~~~~~~~Nv~g~~~l~~~~~~~~ 120 (125)
++ .+++.++.+|..|+.++.++|++.+
T Consensus 63 vD~aE~~~e~A~~vNa~~~~~lA~aa~~~g 92 (281)
T COG1091 63 VDKAESEPELAFAVNATGAENLARAAAEVG 92 (281)
T ss_pred cccccCCHHHHHHhHHHHHHHHHHHHHHhC
Confidence 66 3468899999999999999999865
No 44
>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional
Probab=99.44 E-value=1.2e-12 Score=92.05 Aligned_cols=100 Identities=17% Similarity=0.154 Sum_probs=60.2
Q ss_pred EEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHH--hhhccCChhhhhhhh-c---CccCCCeEEEec
Q psy897 16 IFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEK--MLDNEGPIFKDFANL-V---RLKTQRIRFIFL 89 (125)
Q Consensus 16 vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~l~~~-~---~l~~~~~Vih~a 89 (125)
|+||||+||||++|+++|++. |++++++.+..........+.+ ..+ ....+++... . .....|+|||+|
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~---g~~~v~~~~~~~~~~~~~~~~~~~~~d--~~~~~~~~~~~~~~~~~~~~d~Vih~A 76 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDK---GITDILVVDNLKDGTKFVNLVDLDIAD--YMDKEDFLAQIMAGDDFGDIEAIFHEG 76 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhC---CCceEEEecCCCcchHHHhhhhhhhhh--hhhHHHHHHHHhcccccCCccEEEECc
Confidence 799999999999999999998 6765555444322111111111 111 0000111110 0 001238999999
Q ss_pred cccCc-chhHHHHhHhhHHHHHHHHHHHhhCC
Q psy897 90 ATLRF-DEELKIAIRTNICATQTVVKLAKQCP 120 (125)
Q Consensus 90 ~~~~~-~~~~~~~~~~Nv~g~~~l~~~~~~~~ 120 (125)
|.... ..+....+++|+.++.+++++|++..
T Consensus 77 ~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~ 108 (308)
T PRK11150 77 ACSSTTEWDGKYMMDNNYQYSKELLHYCLERE 108 (308)
T ss_pred eecCCcCCChHHHHHHHHHHHHHHHHHHHHcC
Confidence 96532 22335578999999999999998864
No 45
>KOG1430|consensus
Probab=99.43 E-value=2.8e-13 Score=96.60 Aligned_cols=111 Identities=20% Similarity=0.278 Sum_probs=71.8
Q ss_pred CCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhc-cCChhhhhhhhcCcc--CCC-eEEE
Q psy897 12 KDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDN-EGPIFKDFANLVRLK--TQR-IRFI 87 (125)
Q Consensus 12 ~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~l~--~~~-~Vih 87 (125)
++.+++||||+||+|.+|+++|+++.+ ..+|+++|..+............... ......|+.+...+. ... .|+|
T Consensus 3 ~~~~vlVtGG~GflG~hlv~~L~~~~~-~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~~~~Vvh 81 (361)
T KOG1430|consen 3 KKLSVLVTGGSGFLGQHLVQALLENEL-KLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQGAVVVH 81 (361)
T ss_pred cCCEEEEECCccHHHHHHHHHHHhccc-ccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhccCceEEE
Confidence 357899999999999999999999932 48999999866522111111110010 011123444332232 111 7888
Q ss_pred eccccCcc---hhHHHHhHhhHHHHHHHHHHHhhCCCCcC
Q psy897 88 FLATLRFD---EELKIAIRTNICATQTVVKLAKQCPHLRL 124 (125)
Q Consensus 88 ~a~~~~~~---~~~~~~~~~Nv~g~~~l~~~~~~~~~~~~ 124 (125)
||+..... .+.+..+++|+.||.+++++|++.. +++
T Consensus 82 ~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~-v~~ 120 (361)
T KOG1430|consen 82 CAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELG-VKR 120 (361)
T ss_pred eccccCccccccchhhheeecchhHHHHHHHHHHhC-CCE
Confidence 88876332 3467888999999999999999874 444
No 46
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=99.43 E-value=2e-12 Score=89.83 Aligned_cols=89 Identities=21% Similarity=0.277 Sum_probs=65.6
Q ss_pred eEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhccCChhhhhhhhcCccCCCeEEEeccccCc
Q psy897 15 VIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDNEGPIFKDFANLVRLKTQRIRFIFLATLRF 94 (125)
Q Consensus 15 ~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~Vih~a~~~~~ 94 (125)
+|+||||+||||+++++.|++. |++|++++|...+......+...+. . ... |+|||+||....
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~---g~~v~~~~r~~~d~~~~~~~~~~~~-------~----~~~---d~vi~~a~~~~~ 63 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPE---GRVVVALTSSQLDLTDPEALERLLR-------A----IRP---DAVVNTAAYTDV 63 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhc---CCEEEEeCCcccCCCCHHHHHHHHH-------h----CCC---CEEEECCccccc
Confidence 4899999999999999999998 7999999986443322223322222 0 022 899999998643
Q ss_pred c---hhHHHHhHhhHHHHHHHHHHHhhCC
Q psy897 95 D---EELKIAIRTNICATQTVVKLAKQCP 120 (125)
Q Consensus 95 ~---~~~~~~~~~Nv~g~~~l~~~~~~~~ 120 (125)
. ..+...+++|+.++.+++++|++.+
T Consensus 64 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 92 (287)
T TIGR01214 64 DGAESDPEKAFAVNALAPQNLARAAARHG 92 (287)
T ss_pred cccccCHHHHHHHHHHHHHHHHHHHHHcC
Confidence 2 2456678999999999999998764
No 47
>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional
Probab=99.42 E-value=7.4e-13 Score=94.58 Aligned_cols=102 Identities=20% Similarity=0.252 Sum_probs=63.5
Q ss_pred ceEEEecCccchhHHHHHHHHHhCCCcc-EEEEEecCCCCCCHHHHHHHhhhc--cCChhhhhhhhcCcc------CCCe
Q psy897 14 GVIFLTGGTGFMGKVLLDTLLRRFPSIH-SIYILVRERKGVSPQERIEKMLDN--EGPIFKDFANLVRLK------TQRI 84 (125)
Q Consensus 14 ~~vlitG~~G~iG~~i~~~l~~~~~~~~-~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~l~------~~~~ 84 (125)
|+|+||||+||||++|+++|+++ +. .|+++++...... .......... ...+..|+.+...+. ..|+
T Consensus 1 mkilITGgtG~iG~~l~~~L~~~---g~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 76 (352)
T PRK10084 1 MKILVTGGAGFIGSAVVRHIINN---TQDSVVNVDKLTYAGN-LESLADVSDSERYVFEHADICDRAELDRIFAQHQPDA 76 (352)
T ss_pred CeEEEECCCcHHhHHHHHHHHHh---CCCeEEEecCCCccch-HHHHHhcccCCceEEEEecCCCHHHHHHHHHhcCCCE
Confidence 47999999999999999999998 54 4555554321111 1111111100 001223333322211 2389
Q ss_pred EEEeccccCcc---hhHHHHhHhhHHHHHHHHHHHhhC
Q psy897 85 RFIFLATLRFD---EELKIAIRTNICATQTVVKLAKQC 119 (125)
Q Consensus 85 Vih~a~~~~~~---~~~~~~~~~Nv~g~~~l~~~~~~~ 119 (125)
|||+||..... .++...+++|+.|+.+++++|++.
T Consensus 77 vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~ 114 (352)
T PRK10084 77 VMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNY 114 (352)
T ss_pred EEECCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHh
Confidence 99999986432 345778899999999999999863
No 48
>PLN02240 UDP-glucose 4-epimerase
Probab=99.41 E-value=1.7e-12 Score=92.66 Aligned_cols=107 Identities=14% Similarity=0.147 Sum_probs=69.8
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCC-HHHHHHHhhh----ccCChhhhhhhhcCcc-----
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVS-PQERIEKMLD----NEGPIFKDFANLVRLK----- 80 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~-~~~~~~~~~~----~~~~~~~~l~~~~~l~----- 80 (125)
+.+++++||||+||+|++|++.|+++ +++|++++|...... .......... ....+..|+.+...+.
T Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~---g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~ 79 (352)
T PLN02240 3 LMGRTILVTGGAGYIGSHTVLQLLLA---GYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFAS 79 (352)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC---CCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHh
Confidence 34689999999999999999999998 799999987543211 1111221110 0011122333222111
Q ss_pred -CCCeEEEeccccCc---chhHHHHhHhhHHHHHHHHHHHhhCC
Q psy897 81 -TQRIRFIFLATLRF---DEELKIAIRTNICATQTVVKLAKQCP 120 (125)
Q Consensus 81 -~~~~Vih~a~~~~~---~~~~~~~~~~Nv~g~~~l~~~~~~~~ 120 (125)
..|+|||+||.... ..++...+++|+.++.+++++|++.+
T Consensus 80 ~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 123 (352)
T PLN02240 80 TRFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHG 123 (352)
T ss_pred CCCCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcC
Confidence 23899999997532 23567788999999999999998753
No 49
>TIGR01746 Thioester-redct thioester reductase domain. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.
Probab=99.41 E-value=9e-13 Score=93.87 Aligned_cols=103 Identities=26% Similarity=0.331 Sum_probs=69.7
Q ss_pred eEEEecCccchhHHHHHHHHHhCCCc--cEEEEEecCCCCCCHHHHHHHhhh------------ccCChhhhhhhh-cCc
Q psy897 15 VIFLTGGTGFMGKVLLDTLLRRFPSI--HSIYILVRERKGVSPQERIEKMLD------------NEGPIFKDFANL-VRL 79 (125)
Q Consensus 15 ~vlitG~~G~iG~~i~~~l~~~~~~~--~~v~~~~r~~~~~~~~~~~~~~~~------------~~~~~~~~l~~~-~~l 79 (125)
+|+|||||||||++|+++|+++ + .+|+++.|+.......+++.+... ....+..|+..+ .++
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~---g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl 77 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRR---STQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGL 77 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhC---CCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCc
Confidence 5899999999999999999998 5 689999997653222222221111 001111233211 001
Q ss_pred ---------cCCCeEEEeccccCcchhHHHHhHhhHHHHHHHHHHHhhCC
Q psy897 80 ---------KTQRIRFIFLATLRFDEELKIAIRTNICATQTVVKLAKQCP 120 (125)
Q Consensus 80 ---------~~~~~Vih~a~~~~~~~~~~~~~~~Nv~g~~~l~~~~~~~~ 120 (125)
...|+|||+||...+..++....++|+.|+.+++++|.+.+
T Consensus 78 ~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~nv~g~~~ll~~a~~~~ 127 (367)
T TIGR01746 78 SDAEWERLAENVDTIVHNGALVNWVYPYSELRAANVLGTREVLRLAASGR 127 (367)
T ss_pred CHHHHHHHHhhCCEEEeCCcEeccCCcHHHHhhhhhHHHHHHHHHHhhCC
Confidence 03479999999987766777788899999999999998754
No 50
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=99.40 E-value=6e-13 Score=89.72 Aligned_cols=100 Identities=21% Similarity=0.338 Sum_probs=65.8
Q ss_pred EEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHH--hhh-c--cCChhhhhhhhcCccCCCeEEEecc
Q psy897 16 IFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEK--MLD-N--EGPIFKDFANLVRLKTQRIRFIFLA 90 (125)
Q Consensus 16 vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~--~~~-~--~~~~~~~l~~~~~l~~~~~Vih~a~ 90 (125)
|+||||+||||++++++|+++ ++.|+.+.|............. +.. . ....+..+.+...+ |+|||+|+
T Consensus 1 IlI~GatG~iG~~l~~~l~~~---g~~v~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~~~~---d~vi~~a~ 74 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKK---GHEVIVLSRSSNSESFEEKKLNVEFVIGDLTDKEQLEKLLEKANI---DVVIHLAA 74 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHT---TTEEEEEESCSTGGHHHHHHTTEEEEESETTSHHHHHHHHHHHTE---SEEEEEBS
T ss_pred EEEEccCCHHHHHHHHHHHHc---CCccccccccccccccccccceEEEEEeeccccccccccccccCc---eEEEEeec
Confidence 799999999999999999999 7888888886653211111000 000 0 00111111111133 89999999
Q ss_pred ccCc---chhHHHHhHhhHHHHHHHHHHHhhCCC
Q psy897 91 TLRF---DEELKIAIRTNICATQTVVKLAKQCPH 121 (125)
Q Consensus 91 ~~~~---~~~~~~~~~~Nv~g~~~l~~~~~~~~~ 121 (125)
.... .......++.|+.++.+++++|++.+.
T Consensus 75 ~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~ 108 (236)
T PF01370_consen 75 FSSNPESFEDPEEIIEANVQGTRNLLEAAREAGV 108 (236)
T ss_dssp SSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred cccccccccccccccccccccccccccccccccc
Confidence 8632 145567788999999999999987653
No 51
>PRK12367 short chain dehydrogenase; Provisional
Probab=99.39 E-value=1.9e-12 Score=88.76 Aligned_cols=103 Identities=15% Similarity=0.130 Sum_probs=68.4
Q ss_pred cccCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhccCChhhhhhhhcCc----cCCCe
Q psy897 9 DFYKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDNEGPIFKDFANLVRL----KTQRI 84 (125)
Q Consensus 9 ~~~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l----~~~~~ 84 (125)
..+++++++||||+|+||++++++|++. |++|++++|+..... . ....... ..+..|+.+...+ ...|+
T Consensus 10 ~~l~~k~~lITGas~gIG~ala~~l~~~---G~~Vi~~~r~~~~~~-~-~~~~~~~--~~~~~D~~~~~~~~~~~~~iDi 82 (245)
T PRK12367 10 STWQGKRIGITGASGALGKALTKAFRAK---GAKVIGLTHSKINNS-E-SNDESPN--EWIKWECGKEESLDKQLASLDV 82 (245)
T ss_pred HhhCCCEEEEEcCCcHHHHHHHHHHHHC---CCEEEEEECCchhhh-h-hhccCCC--eEEEeeCCCHHHHHHhcCCCCE
Confidence 3467899999999999999999999998 799999988652111 0 0000000 0111122221111 12389
Q ss_pred EEEeccccCc----chhHHHHhHhhHHHHHHHHHHHhh
Q psy897 85 RFIFLATLRF----DEELKIAIRTNICATQTVVKLAKQ 118 (125)
Q Consensus 85 Vih~a~~~~~----~~~~~~~~~~Nv~g~~~l~~~~~~ 118 (125)
+||+||.... .+++...+++|+.|+.++++++..
T Consensus 83 lVnnAG~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~ 120 (245)
T PRK12367 83 LILNHGINPGGRQDPENINKALEINALSSWRLLELFED 120 (245)
T ss_pred EEECCccCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 9999997522 256788889999999999997643
No 52
>PRK05717 oxidoreductase; Validated
Probab=99.38 E-value=2e-12 Score=88.59 Aligned_cols=103 Identities=13% Similarity=0.034 Sum_probs=67.7
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhccCChhhhhhhhcCc-----------
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDNEGPIFKDFANLVRL----------- 79 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l----------- 79 (125)
+++|+++||||+|+||+++++.|++. +++|++++|+.... .....+.......+..|+.+...+
T Consensus 8 ~~~k~vlItG~sg~IG~~~a~~l~~~---g~~v~~~~~~~~~~--~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 82 (255)
T PRK05717 8 HNGRVALVTGAARGIGLGIAAWLIAE---GWQVVLADLDRERG--SKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQF 82 (255)
T ss_pred cCCCEEEEeCCcchHHHHHHHHHHHc---CCEEEEEcCCHHHH--HHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence 56899999999999999999999998 78999988754321 111111111000111222221111
Q ss_pred cCCCeEEEeccccCc---------chhHHHHhHhhHHHHHHHHHHHhh
Q psy897 80 KTQRIRFIFLATLRF---------DEELKIAIRTNICATQTVVKLAKQ 118 (125)
Q Consensus 80 ~~~~~Vih~a~~~~~---------~~~~~~~~~~Nv~g~~~l~~~~~~ 118 (125)
...|+|||+||.... .+++...+++|+.++.++++++..
T Consensus 83 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 130 (255)
T PRK05717 83 GRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAP 130 (255)
T ss_pred CCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 023899999997532 135677889999999999998853
No 53
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=99.38 E-value=1.1e-12 Score=92.46 Aligned_cols=99 Identities=21% Similarity=0.296 Sum_probs=67.6
Q ss_pred ceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhccCChhhhhhhhcCc----cCCCeEEEec
Q psy897 14 GVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDNEGPIFKDFANLVRL----KTQRIRFIFL 89 (125)
Q Consensus 14 ~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l----~~~~~Vih~a 89 (125)
|+++||||+||||+++++.|++. +++|++++|++.... .+..... ..+..|+.+...+ +..|+|||+|
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~---g~~V~~~~r~~~~~~---~~~~~~~--~~~~~D~~~~~~l~~~~~~~d~vi~~a 72 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQ---GEEVRVLVRPTSDRR---NLEGLDV--EIVEGDLRDPASLRKAVAGCRALFHVA 72 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHC---CCEEEEEEecCcccc---ccccCCc--eEEEeeCCCHHHHHHHHhCCCEEEEec
Confidence 47999999999999999999998 799999999655321 1110000 1112233222111 1237999999
Q ss_pred cccC-cchhHHHHhHhhHHHHHHHHHHHhhCC
Q psy897 90 ATLR-FDEELKIAIRTNICATQTVVKLAKQCP 120 (125)
Q Consensus 90 ~~~~-~~~~~~~~~~~Nv~g~~~l~~~~~~~~ 120 (125)
+... +..++...+++|+.++.+++++|++..
T Consensus 73 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 104 (328)
T TIGR03466 73 ADYRLWAPDPEEMYAANVEGTRNLLRAALEAG 104 (328)
T ss_pred eecccCCCCHHHHHHHHHHHHHHHHHHHHHhC
Confidence 8753 234567788999999999999988753
No 54
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=99.38 E-value=1e-12 Score=91.27 Aligned_cols=96 Identities=22% Similarity=0.244 Sum_probs=64.6
Q ss_pred EEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhccCChhhhhhhhcCccCCCeEEEeccccCc-
Q psy897 16 IFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDNEGPIFKDFANLVRLKTQRIRFIFLATLRF- 94 (125)
Q Consensus 16 vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~Vih~a~~~~~- 94 (125)
|+||||+||||+++++.|++. +++|++++|++........ ..+.. ... ......+...|+|||+||....
T Consensus 1 vlVtGatG~iG~~l~~~L~~~---g~~V~~~~r~~~~~~~~~~-~~~~~----~~~-~~~~~~~~~~D~Vvh~a~~~~~~ 71 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKD---GHEVTILTRSPPAGANTKW-EGYKP----WAP-LAESEALEGADAVINLAGEPIAD 71 (292)
T ss_pred CEEEcccchhhHHHHHHHHHc---CCEEEEEeCCCCCCCcccc-eeeec----ccc-cchhhhcCCCCEEEECCCCCccc
Confidence 689999999999999999998 7999999997664321100 00100 000 0000011134899999997542
Q ss_pred ---c-hhHHHHhHhhHHHHHHHHHHHhhCC
Q psy897 95 ---D-EELKIAIRTNICATQTVVKLAKQCP 120 (125)
Q Consensus 95 ---~-~~~~~~~~~Nv~g~~~l~~~~~~~~ 120 (125)
. ......+++|+.++.+++++|++..
T Consensus 72 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~ 101 (292)
T TIGR01777 72 KRWTEERKQEIRDSRIDTTRALVEAIAAAE 101 (292)
T ss_pred ccCCHHHHHHHHhcccHHHHHHHHHHHhcC
Confidence 2 2345677899999999999998875
No 55
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=99.38 E-value=1.6e-12 Score=88.98 Aligned_cols=105 Identities=13% Similarity=0.083 Sum_probs=67.9
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCC-HHHHHHHhhhccCChhhhhhhhcCcc---------
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVS-PQERIEKMLDNEGPIFKDFANLVRLK--------- 80 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~l~--------- 80 (125)
+++|+++||||+|+||+++++.|++. |++|++++|++.... ....+.....+...+..|+.+...+.
T Consensus 8 ~~~k~vlItGa~g~iG~~ia~~l~~~---G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 84 (255)
T PRK07523 8 LTGRRALVTGSSQGIGYALAEGLAQA---GAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAE 84 (255)
T ss_pred CCCCEEEEECCcchHHHHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHh
Confidence 57899999999999999999999998 799999988654211 11111111000001111222211111
Q ss_pred --CCCeEEEeccccCc-------chhHHHHhHhhHHHHHHHHHHHhh
Q psy897 81 --TQRIRFIFLATLRF-------DEELKIAIRTNICATQTVVKLAKQ 118 (125)
Q Consensus 81 --~~~~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~~~ 118 (125)
..|+|||+||.... .+.++..+++|+.++.++++++.+
T Consensus 85 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 131 (255)
T PRK07523 85 IGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVAR 131 (255)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 23799999998522 245677888999999999998764
No 56
>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase. This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).
Probab=99.38 E-value=2e-12 Score=90.82 Aligned_cols=100 Identities=17% Similarity=0.197 Sum_probs=63.1
Q ss_pred EEEecCccchhHHHHHHHHHhCCCcc-EEEEEecCCCCCCHHHHHHH--hhhcc--CChhhhhhhhcCccCCCeEEEecc
Q psy897 16 IFLTGGTGFMGKVLLDTLLRRFPSIH-SIYILVRERKGVSPQERIEK--MLDNE--GPIFKDFANLVRLKTQRIRFIFLA 90 (125)
Q Consensus 16 vlitG~~G~iG~~i~~~l~~~~~~~~-~v~~~~r~~~~~~~~~~~~~--~~~~~--~~~~~~l~~~~~l~~~~~Vih~a~ 90 (125)
|+||||+||||+++++.|++. ++ .|++++|........ .... ..... ......+.+. .+...|+|||+||
T Consensus 1 ilItGatG~iG~~l~~~L~~~---g~~~v~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~-~~~~~D~vvh~A~ 75 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNER---GITDILVVDNLRDGHKFL-NLADLVIADYIDKEDFLDRLEKG-AFGKIEAIFHQGA 75 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHc---CCceEEEEecCCCchhhh-hhhheeeeccCcchhHHHHHHhh-ccCCCCEEEECcc
Confidence 689999999999999999998 66 788887654321111 1110 00000 0111111110 0112389999999
Q ss_pred ccCcc-hhHHHHhHhhHHHHHHHHHHHhhCC
Q psy897 91 TLRFD-EELKIAIRTNICATQTVVKLAKQCP 120 (125)
Q Consensus 91 ~~~~~-~~~~~~~~~Nv~g~~~l~~~~~~~~ 120 (125)
..... .++...+++|+.++.+++++|++.+
T Consensus 76 ~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~ 106 (314)
T TIGR02197 76 CSDTTETDGEYMMENNYQYSKRLLDWCAEKG 106 (314)
T ss_pred ccCccccchHHHHHHHHHHHHHHHHHHHHhC
Confidence 76432 3556788999999999999998764
No 57
>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase
Probab=99.37 E-value=3.3e-12 Score=89.38 Aligned_cols=90 Identities=16% Similarity=0.162 Sum_probs=60.2
Q ss_pred EEecCccchhHHHHHHHHHhCCCccEEEEEecC-CCCCCHHHHHHHhhhccCChhhhhhhhcCccCCCeEEEeccccCc-
Q psy897 17 FLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRE-RKGVSPQERIEKMLDNEGPIFKDFANLVRLKTQRIRFIFLATLRF- 94 (125)
Q Consensus 17 litG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~Vih~a~~~~~- 94 (125)
|||||+||||++|++.|++. ++.++++.+. ..+......+...+. .... |+|||+||....
T Consensus 1 lItGa~GfiG~~l~~~L~~~---g~~v~~~~~~~~~Dl~~~~~l~~~~~-----------~~~~---d~Vih~A~~~~~~ 63 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEAL---GFTNLVLRTHKELDLTRQADVEAFFA-----------KEKP---TYVILAAAKVGGI 63 (306)
T ss_pred CcccCCCcccHHHHHHHHhC---CCcEEEeeccccCCCCCHHHHHHHHh-----------ccCC---CEEEEeeeeeccc
Confidence 69999999999999999998 6766655432 211111112222211 1122 899999998532
Q ss_pred ---chhHHHHhHhhHHHHHHHHHHHhhCCCCcC
Q psy897 95 ---DEELKIAIRTNICATQTVVKLAKQCPHLRL 124 (125)
Q Consensus 95 ---~~~~~~~~~~Nv~g~~~l~~~~~~~~~~~~ 124 (125)
..++...+++|+.++.+++++|++.. +++
T Consensus 64 ~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~ 95 (306)
T PLN02725 64 HANMTYPADFIRENLQIQTNVIDAAYRHG-VKK 95 (306)
T ss_pred chhhhCcHHHHHHHhHHHHHHHHHHHHcC-CCe
Confidence 23456678899999999999998864 443
No 58
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=99.37 E-value=5.1e-12 Score=89.73 Aligned_cols=104 Identities=17% Similarity=0.167 Sum_probs=66.7
Q ss_pred ceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCC-HHHHHHHhhhc-cCChhhhhhhhcCcc------CCCeE
Q psy897 14 GVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVS-PQERIEKMLDN-EGPIFKDFANLVRLK------TQRIR 85 (125)
Q Consensus 14 ~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~-~~~~~~~~~~~-~~~~~~~l~~~~~l~------~~~~V 85 (125)
|+++||||+||||+++++.|++. +++|++++|...... ....+...... ...+..|+.+...+. ..|+|
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~---g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v 77 (338)
T PRK10675 1 MRVLVTGGSGYIGSHTCVQLLQN---GHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDHAIDTV 77 (338)
T ss_pred CeEEEECCCChHHHHHHHHHHHC---CCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcCCCCEE
Confidence 57999999999999999999998 799999876433211 11111111110 001112333221111 23899
Q ss_pred EEeccccCcc---hhHHHHhHhhHHHHHHHHHHHhhCC
Q psy897 86 FIFLATLRFD---EELKIAIRTNICATQTVVKLAKQCP 120 (125)
Q Consensus 86 ih~a~~~~~~---~~~~~~~~~Nv~g~~~l~~~~~~~~ 120 (125)
||+||..... ..+...+++|+.++.+++++|++.+
T Consensus 78 vh~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 115 (338)
T PRK10675 78 IHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAAN 115 (338)
T ss_pred EECCccccccchhhCHHHHHHHHHHHHHHHHHHHHHcC
Confidence 9999976432 2345678899999999999998764
No 59
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=99.36 E-value=2.2e-12 Score=88.53 Aligned_cols=114 Identities=19% Similarity=0.145 Sum_probs=70.2
Q ss_pred CCCCcccccc--cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhccCChhhhhhhhcC
Q psy897 1 MEFYPTVEDF--YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDNEGPIFKDFANLVR 78 (125)
Q Consensus 1 m~~~~~~~~~--~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 78 (125)
||+....+.+ +++|+++||||+|+||+++++.|++. |++|++++|+.......+.+.........+..|+.+...
T Consensus 1 ~~~~~~~~~~~~l~~k~vlItGas~gIG~~ia~~l~~~---G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 77 (258)
T PRK06935 1 MELDKFSMDFFSLDGKVAIVTGGNTGLGQGYAVALAKA---GADIIITTHGTNWDETRRLIEKEGRKVTFVQVDLTKPES 77 (258)
T ss_pred CchhhhccccccCCCCEEEEeCCCchHHHHHHHHHHHC---CCEEEEEeCCcHHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence 4444333332 56899999999999999999999998 799999988622111111121111100011122222111
Q ss_pred cc-----------CCCeEEEeccccCc-------chhHHHHhHhhHHHHHHHHHHHh
Q psy897 79 LK-----------TQRIRFIFLATLRF-------DEELKIAIRTNICATQTVVKLAK 117 (125)
Q Consensus 79 l~-----------~~~~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~~ 117 (125)
++ ..|++||++|.... .++++..+++|+.++..+.+++.
T Consensus 78 i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 134 (258)
T PRK06935 78 AEKVVKEALEEFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVA 134 (258)
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHH
Confidence 11 23899999997521 24577788999999988887654
No 60
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=99.36 E-value=2.9e-12 Score=98.59 Aligned_cols=87 Identities=17% Similarity=0.156 Sum_probs=61.0
Q ss_pred CceEEEecCccchhHHHHHHHHHhCCCccEEE-EEecCCCCCCHHHHHHHhhhccCChhhhhhhhcCccCCCeEEEeccc
Q psy897 13 DGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIY-ILVRERKGVSPQERIEKMLDNEGPIFKDFANLVRLKTQRIRFIFLAT 91 (125)
Q Consensus 13 ~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~-~~~r~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~Vih~a~~ 91 (125)
.|+||||||+||||++|++.|.++ +++|. ...+ ......+...+. . ... |+||||||.
T Consensus 380 ~mkiLVtGa~G~iG~~l~~~L~~~---g~~v~~~~~~----l~d~~~v~~~i~----------~-~~p---d~Vih~Aa~ 438 (668)
T PLN02260 380 SLKFLIYGRTGWIGGLLGKLCEKQ---GIAYEYGKGR----LEDRSSLLADIR----------N-VKP---THVFNAAGV 438 (668)
T ss_pred CceEEEECCCchHHHHHHHHHHhC---CCeEEeeccc----cccHHHHHHHHH----------h-hCC---CEEEECCcc
Confidence 478999999999999999999987 67773 2221 111112222111 1 122 899999998
Q ss_pred cC---cc---hhHHHHhHhhHHHHHHHHHHHhhCC
Q psy897 92 LR---FD---EELKIAIRTNICATQTVVKLAKQCP 120 (125)
Q Consensus 92 ~~---~~---~~~~~~~~~Nv~g~~~l~~~~~~~~ 120 (125)
+. .+ .++...+++|+.|+.+|+++|++.+
T Consensus 439 ~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g 473 (668)
T PLN02260 439 TGRPNVDWCESHKVETIRANVVGTLTLADVCRENG 473 (668)
T ss_pred cCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcC
Confidence 62 22 3567788999999999999999864
No 61
>PRK06194 hypothetical protein; Provisional
Probab=99.35 E-value=2.5e-12 Score=89.40 Aligned_cols=100 Identities=8% Similarity=0.056 Sum_probs=65.1
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhh---ccCChhhhhhhhcCcc-------
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLD---NEGPIFKDFANLVRLK------- 80 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~l~~~~~l~------- 80 (125)
++++++|||||+|+||++++++|+++ |++|++++|+.... .....++.. ....+..|+.+...++
T Consensus 4 ~~~k~vlVtGasggIG~~la~~l~~~---G~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~ 78 (287)
T PRK06194 4 FAGKVAVITGAASGFGLAFARIGAAL---GMKLVLADVQQDAL--DRAVAELRAQGAEVLGVRTDVSDAAQVEALADAAL 78 (287)
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHC---CCEEEEEeCChHHH--HHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 35789999999999999999999998 79999999864421 111111111 0001112333221111
Q ss_pred ----CCCeEEEeccccCc-------chhHHHHhHhhHHHHHHHHHH
Q psy897 81 ----TQRIRFIFLATLRF-------DEELKIAIRTNICATQTVVKL 115 (125)
Q Consensus 81 ----~~~~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~ 115 (125)
..|+|||+||.... .+.++..+++|+.|+.+++++
T Consensus 79 ~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~ 124 (287)
T PRK06194 79 ERFGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRA 124 (287)
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHH
Confidence 23899999998632 145667789999999997665
No 62
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=99.35 E-value=4e-12 Score=95.40 Aligned_cols=109 Identities=16% Similarity=0.188 Sum_probs=71.6
Q ss_pred cccCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCH-HHHHHHhh----h-----ccCChhhhhhhhcC
Q psy897 9 DFYKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSP-QERIEKML----D-----NEGPIFKDFANLVR 78 (125)
Q Consensus 9 ~~~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~-~~~~~~~~----~-----~~~~~~~~l~~~~~ 78 (125)
+...+++++||||+|+||++++++|++. |++|++++|+...... ...+.... . ....+..|+.+...
T Consensus 76 ~~~~gKvVLVTGATGgIG~aLAr~LLk~---G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~es 152 (576)
T PLN03209 76 DTKDEDLAFVAGATGKVGSRTVRELLKL---GFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQ 152 (576)
T ss_pred ccCCCCEEEEECCCCHHHHHHHHHHHHC---CCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHH
Confidence 3456889999999999999999999998 7999999997653211 11111100 0 00112234433222
Q ss_pred cc----CCCeEEEeccccCcc-hhHHHHhHhhHHHHHHHHHHHhhCC
Q psy897 79 LK----TQRIRFIFLATLRFD-EELKIAIRTNICATQTVVKLAKQCP 120 (125)
Q Consensus 79 l~----~~~~Vih~a~~~~~~-~~~~~~~~~Nv~g~~~l~~~~~~~~ 120 (125)
+. ..|+|||++|..... .++...+++|+.|+.+++++|++..
T Consensus 153 I~~aLggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~ag 199 (576)
T PLN03209 153 IGPALGNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAK 199 (576)
T ss_pred HHHHhcCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhC
Confidence 21 337999999976321 2456677899999999999998753
No 63
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=99.34 E-value=2.4e-12 Score=93.59 Aligned_cols=108 Identities=22% Similarity=0.346 Sum_probs=68.5
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCH---HHHHHHhhhccCChhhhhhhhcCcc-------
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSP---QERIEKMLDNEGPIFKDFANLVRLK------- 80 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~l~------- 80 (125)
.++++|+||||+||||+++++.|+++ +++|++++|+...... .............+..|+.+...+.
T Consensus 58 ~~~~kVLVtGatG~IG~~l~~~Ll~~---G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~ 134 (390)
T PLN02657 58 PKDVTVLVVGATGYIGKFVVRELVRR---GYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEG 134 (390)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC---CCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhC
Confidence 34689999999999999999999998 7999999997643211 1111111110011222333222111
Q ss_pred -CCCeEEEeccccCcchhHHHHhHhhHHHHHHHHHHHhhCCCCcC
Q psy897 81 -TQRIRFIFLATLRFDEELKIAIRTNICATQTVVKLAKQCPHLRL 124 (125)
Q Consensus 81 -~~~~Vih~a~~~~~~~~~~~~~~~Nv~g~~~l~~~~~~~~~~~~ 124 (125)
..|+||||+|.... .....+++|+.++.+++++|++.+ +++
T Consensus 135 ~~~D~Vi~~aa~~~~--~~~~~~~vn~~~~~~ll~aa~~~g-v~r 176 (390)
T PLN02657 135 DPVDVVVSCLASRTG--GVKDSWKIDYQATKNSLDAGREVG-AKH 176 (390)
T ss_pred CCCcEEEECCccCCC--CCccchhhHHHHHHHHHHHHHHcC-CCE
Confidence 13899999885321 123346789999999999998764 443
No 64
>PLN02253 xanthoxin dehydrogenase
Probab=99.34 E-value=2.6e-12 Score=89.13 Aligned_cols=102 Identities=15% Similarity=0.033 Sum_probs=67.1
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhh--ccCChhhhhhhhcCcc--------
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLD--NEGPIFKDFANLVRLK-------- 80 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~l~-------- 80 (125)
+++|+++||||+|+||+++++.|++. |++|++++|..... .....++.. ....+..|+.+...++
T Consensus 16 l~~k~~lItGas~gIG~~la~~l~~~---G~~v~~~~~~~~~~--~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 90 (280)
T PLN02253 16 LLGKVALVTGGATGIGESIVRLFHKH---GAKVCIVDLQDDLG--QNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVD 90 (280)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHc---CCEEEEEeCCHHHH--HHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHH
Confidence 56899999999999999999999998 79999998854311 111111110 0011112332221111
Q ss_pred ---CCCeEEEeccccCc---------chhHHHHhHhhHHHHHHHHHHHh
Q psy897 81 ---TQRIRFIFLATLRF---------DEELKIAIRTNICATQTVVKLAK 117 (125)
Q Consensus 81 ---~~~~Vih~a~~~~~---------~~~~~~~~~~Nv~g~~~l~~~~~ 117 (125)
..|+|||+||.... .++++..+++|+.|+.++++++.
T Consensus 91 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~ 139 (280)
T PLN02253 91 KFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAA 139 (280)
T ss_pred HhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHH
Confidence 23899999997521 14577888999999999988765
No 65
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=99.34 E-value=9.6e-12 Score=85.30 Aligned_cols=94 Identities=24% Similarity=0.386 Sum_probs=64.5
Q ss_pred EEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhccCChhhhhhhhcCccCCCeEEEecccc---
Q psy897 16 IFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDNEGPIFKDFANLVRLKTQRIRFIFLATL--- 92 (125)
Q Consensus 16 vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~Vih~a~~~--- 92 (125)
|+|||||||||++|+.+|.+. +++|++++|+++.... .+.. . ....+.+.+...+ ..|+|||+||..
T Consensus 1 IliTGgTGlIG~~L~~~L~~~---gh~v~iltR~~~~~~~--~~~~--~--v~~~~~~~~~~~~-~~DavINLAG~~I~~ 70 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKG---GHQVTILTRRPPKASQ--NLHP--N--VTLWEGLADALTL-GIDAVINLAGEPIAE 70 (297)
T ss_pred CeEeccccchhHHHHHHHHhC---CCeEEEEEcCCcchhh--hcCc--c--ccccchhhhcccC-CCCEEEECCCCcccc
Confidence 689999999999999999998 7999999998774321 1110 0 0112222221110 238999999986
Q ss_pred -CcchhHH-HHhHhhHHHHHHHHHHHhhC
Q psy897 93 -RFDEELK-IAIRTNICATQTVVKLAKQC 119 (125)
Q Consensus 93 -~~~~~~~-~~~~~Nv~g~~~l~~~~~~~ 119 (125)
+|....+ ...+..+..|..|.++..+.
T Consensus 71 rrWt~~~K~~i~~SRi~~T~~L~e~I~~~ 99 (297)
T COG1090 71 RRWTEKQKEEIRQSRINTTEKLVELIAAS 99 (297)
T ss_pred ccCCHHHHHHHHHHHhHHHHHHHHHHHhc
Confidence 4665444 45578999999999987643
No 66
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=99.34 E-value=4.1e-12 Score=87.06 Aligned_cols=103 Identities=15% Similarity=0.057 Sum_probs=63.8
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCC-HHHHHHHhhhccCChhhhhhhhcCcc---------
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVS-PQERIEKMLDNEGPIFKDFANLVRLK--------- 80 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~l~--------- 80 (125)
+++|+++||||+|+||+++++.|++. |++|++++|++.... ..+.+.........+..|+.+...++
T Consensus 5 ~~~~~vlItGasg~iG~~la~~l~~~---G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 81 (262)
T PRK13394 5 LNGKTAVVTGAASGIGKEIALELARA---GAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAER 81 (262)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC---CCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHH
Confidence 45789999999999999999999998 789999998764211 11112111110001112333221111
Q ss_pred --CCCeEEEeccccCc-------chhHHHHhHhhHHHHHH----HHHHH
Q psy897 81 --TQRIRFIFLATLRF-------DEELKIAIRTNICATQT----VVKLA 116 (125)
Q Consensus 81 --~~~~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~----l~~~~ 116 (125)
..|+|||+||.... .+.++..+++|+.++.. +++.+
T Consensus 82 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~ 130 (262)
T PRK13394 82 FGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHM 130 (262)
T ss_pred cCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHH
Confidence 23899999998532 13466677899999544 55555
No 67
>PRK06500 short chain dehydrogenase; Provisional
Probab=99.33 E-value=5.9e-12 Score=85.66 Aligned_cols=103 Identities=15% Similarity=0.169 Sum_probs=66.7
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhccCChhhhhhhhc-----------Cc
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDNEGPIFKDFANLV-----------RL 79 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----------~l 79 (125)
+++|+++||||+|+||++++++|++. +++|++++|+.... .....++......+..|+.+.. ..
T Consensus 4 ~~~k~vlItGasg~iG~~la~~l~~~---g~~v~~~~r~~~~~--~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (249)
T PRK06500 4 LQGKTALITGGTSGIGLETARQFLAE---GARVAITGRDPASL--EAARAELGESALVIRADAGDVAAQKALAQALAEAF 78 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC---CCEEEEecCCHHHH--HHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence 45789999999999999999999998 79999998864311 1111111110000011111110 00
Q ss_pred cCCCeEEEeccccCc-------chhHHHHhHhhHHHHHHHHHHHhh
Q psy897 80 KTQRIRFIFLATLRF-------DEELKIAIRTNICATQTVVKLAKQ 118 (125)
Q Consensus 80 ~~~~~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~~~ 118 (125)
...|+|||+||.... .+.+...+++|+.++.++++++..
T Consensus 79 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 124 (249)
T PRK06500 79 GRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLP 124 (249)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 123899999997532 145677889999999999998864
No 68
>PRK06398 aldose dehydrogenase; Validated
Probab=99.33 E-value=7.8e-12 Score=85.97 Aligned_cols=98 Identities=15% Similarity=0.164 Sum_probs=66.1
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHH----Hhhhc--cCChhhhhhhhc-CccCCC
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIE----KMLDN--EGPIFKDFANLV-RLKTQR 83 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~----~~~~~--~~~~~~~l~~~~-~l~~~~ 83 (125)
+++|+++||||+|+||+++++.|++. |++|++++|+..... .+. +..+. ....++.+.+.+ .+ |
T Consensus 4 l~gk~vlItGas~gIG~~ia~~l~~~---G~~Vi~~~r~~~~~~---~~~~~~~D~~~~~~i~~~~~~~~~~~~~i---d 74 (258)
T PRK06398 4 LKDKVAIVTGGSQGIGKAVVNRLKEE---GSNVINFDIKEPSYN---DVDYFKVDVSNKEQVIKGIDYVISKYGRI---D 74 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC---CCeEEEEeCCccccC---ceEEEEccCCCHHHHHHHHHHHHHHcCCC---C
Confidence 46799999999999999999999998 799999998654321 010 00000 000111121111 23 8
Q ss_pred eEEEeccccCc-------chhHHHHhHhhHHHHHHHHHHHh
Q psy897 84 IRFIFLATLRF-------DEELKIAIRTNICATQTVVKLAK 117 (125)
Q Consensus 84 ~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~~ 117 (125)
+|||+||.... .++++..+++|+.|+..+++++.
T Consensus 75 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 115 (258)
T PRK06398 75 ILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTI 115 (258)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence 99999997522 24677888999999999988764
No 69
>PRK05876 short chain dehydrogenase; Provisional
Probab=99.33 E-value=3.9e-12 Score=88.37 Aligned_cols=102 Identities=11% Similarity=0.148 Sum_probs=67.2
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhc---cCChhhhhhhhcCcc-------
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDN---EGPIFKDFANLVRLK------- 80 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~l~~~~~l~------- 80 (125)
+++|+++||||+|+||+++++.|++. |++|++.+|+.+.. .....++... ...+..|+.+...+.
T Consensus 4 ~~~k~vlVTGas~gIG~ala~~La~~---G~~Vv~~~r~~~~l--~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 78 (275)
T PRK05876 4 FPGRGAVITGGASGIGLATGTEFARR---GARVVLGDVDKPGL--RQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAF 78 (275)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHC---CCEEEEEeCCHHHH--HHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHH
Confidence 56899999999999999999999998 79999988865421 1111111110 001112332221111
Q ss_pred ----CCCeEEEeccccCc-------chhHHHHhHhhHHHHHHHHHHHh
Q psy897 81 ----TQRIRFIFLATLRF-------DEELKIAIRTNICATQTVVKLAK 117 (125)
Q Consensus 81 ----~~~~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~~ 117 (125)
..|+|||+||.... .+.++..+++|+.|+.++++++.
T Consensus 79 ~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~ 126 (275)
T PRK05876 79 RLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFL 126 (275)
T ss_pred HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHH
Confidence 23899999997521 14567788999999999998764
No 70
>PRK08226 short chain dehydrogenase; Provisional
Probab=99.33 E-value=5e-12 Score=86.85 Aligned_cols=105 Identities=14% Similarity=0.093 Sum_probs=66.7
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhccCChhhhhhhhcCcc----------
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDNEGPIFKDFANLVRLK---------- 80 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~---------- 80 (125)
+.+++++||||+|+||+++++.|++. |++|++++|+.........+.........+..|+.+...++
T Consensus 4 ~~~~~~lItG~s~giG~~la~~l~~~---G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 80 (263)
T PRK08226 4 LTGKTALITGALQGIGEGIARVFARH---GANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKE 80 (263)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHC---CCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 46799999999999999999999998 79999998865311111111110000001112222211111
Q ss_pred -CCCeEEEeccccCc-------chhHHHHhHhhHHHHHHHHHHHhh
Q psy897 81 -TQRIRFIFLATLRF-------DEELKIAIRTNICATQTVVKLAKQ 118 (125)
Q Consensus 81 -~~~~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~~~ 118 (125)
..|+|||+||.... .+.++..+++|+.++..+++++..
T Consensus 81 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 126 (263)
T PRK08226 81 GRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLP 126 (263)
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 23799999997522 134666788999999999987653
No 71
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=99.32 E-value=5.9e-12 Score=85.76 Aligned_cols=103 Identities=14% Similarity=0.112 Sum_probs=66.9
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhccCChhhhhhhhcCc-----------
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDNEGPIFKDFANLVRL----------- 79 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l----------- 79 (125)
+++|+++||||+|+||++++++|++. |++|++++|+... ...+.+.........+..|+.+...+
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~~~---G~~vi~~~r~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (248)
T TIGR01832 3 LEGKVALVTGANTGLGQGIAVGLAEA---GADIVGAGRSEPS-ETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEF 78 (248)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC---CCEEEEEcCchHH-HHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 46899999999999999999999998 7999999885421 11122222111000111122211110
Q ss_pred cCCCeEEEeccccCc-------chhHHHHhHhhHHHHHHHHHHHh
Q psy897 80 KTQRIRFIFLATLRF-------DEELKIAIRTNICATQTVVKLAK 117 (125)
Q Consensus 80 ~~~~~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~~ 117 (125)
...|+|||+||.... .+.++..+++|+.++.++++++.
T Consensus 79 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 123 (248)
T TIGR01832 79 GHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAA 123 (248)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHH
Confidence 123899999998532 14567788999999999998764
No 72
>KOG1205|consensus
Probab=99.32 E-value=5.1e-12 Score=87.63 Aligned_cols=106 Identities=18% Similarity=0.202 Sum_probs=72.1
Q ss_pred cccCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHH-HHHHHhhhcc--CChhhhhhhhcCcc-----
Q psy897 9 DFYKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQ-ERIEKMLDNE--GPIFKDFANLVRLK----- 80 (125)
Q Consensus 9 ~~~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~-~~~~~~~~~~--~~~~~~l~~~~~l~----- 80 (125)
..+.+|.|+||||+++||.+++.+|.++ |..++.+.|...+.+.. +.+.+..... ..+..|+.+...++
T Consensus 8 e~~~~kvVvITGASsGIG~~lA~~la~~---G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~ 84 (282)
T KOG1205|consen 8 ERLAGKVVLITGASSGIGEALAYELAKR---GAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEW 84 (282)
T ss_pred HHhCCCEEEEeCCCcHHHHHHHHHHHhC---CCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHH
Confidence 4578999999999999999999999999 78888887765543322 3333332211 11112333322111
Q ss_pred ------CCCeEEEeccccCcc-------hhHHHHhHhhHHHHHHHHHHHh
Q psy897 81 ------TQRIRFIFLATLRFD-------EELKIAIRTNICATQTVVKLAK 117 (125)
Q Consensus 81 ------~~~~Vih~a~~~~~~-------~~~~~~~~~Nv~g~~~l~~~~~ 117 (125)
..|++||+||+.... ++....+++|+.|+..+.+++-
T Consensus 85 ~~~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~al 134 (282)
T KOG1205|consen 85 AIRHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAAL 134 (282)
T ss_pred HHHhcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHH
Confidence 348999999997421 4567788999999999988754
No 73
>PRK07890 short chain dehydrogenase; Provisional
Probab=99.32 E-value=5.7e-12 Score=86.20 Aligned_cols=104 Identities=12% Similarity=0.055 Sum_probs=68.6
Q ss_pred ccCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhh---hccCChhhhhhhhcCc-------
Q psy897 10 FYKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKML---DNEGPIFKDFANLVRL------- 79 (125)
Q Consensus 10 ~~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~l------- 79 (125)
++++|+++||||+|+||+++++.|+++ |++|++++|++... +....++. .....+..|+.+...+
T Consensus 2 ~l~~k~vlItGa~~~IG~~la~~l~~~---G~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 76 (258)
T PRK07890 2 LLKGKVVVVSGVGPGLGRTLAVRAARA---GADVVLAARTAERL--DEVAAEIDDLGRRALAVPTDITDEDQCANLVALA 76 (258)
T ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHc---CCEEEEEeCCHHHH--HHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHH
Confidence 356799999999999999999999998 79999999865421 11111111 0001111222221111
Q ss_pred ----cCCCeEEEeccccCc--------chhHHHHhHhhHHHHHHHHHHHhh
Q psy897 80 ----KTQRIRFIFLATLRF--------DEELKIAIRTNICATQTVVKLAKQ 118 (125)
Q Consensus 80 ----~~~~~Vih~a~~~~~--------~~~~~~~~~~Nv~g~~~l~~~~~~ 118 (125)
...|+|||+||.... .+++...+++|+.++..+++++.+
T Consensus 77 ~~~~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 127 (258)
T PRK07890 77 LERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTP 127 (258)
T ss_pred HHHcCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 123899999997421 145777889999999999998764
No 74
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=99.32 E-value=9.2e-12 Score=84.12 Aligned_cols=101 Identities=14% Similarity=0.117 Sum_probs=69.4
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCC-HHHHHHHhhhccCChhhhhhhhcCcc---------
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVS-PQERIEKMLDNEGPIFKDFANLVRLK--------- 80 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~l~--------- 80 (125)
.++|.++||||+++||.++++.|.+. |++|+...|..+..+ ...++.+ ....++.-|+++...++
T Consensus 4 ~~~kv~lITGASSGiG~A~A~~l~~~---G~~vvl~aRR~drL~~la~~~~~--~~~~~~~~DVtD~~~~~~~i~~~~~~ 78 (246)
T COG4221 4 LKGKVALITGASSGIGEATARALAEA---GAKVVLAARREERLEALADEIGA--GAALALALDVTDRAAVEAAIEALPEE 78 (246)
T ss_pred CCCcEEEEecCcchHHHHHHHHHHHC---CCeEEEEeccHHHHHHHHHhhcc--CceEEEeeccCCHHHHHHHHHHHHHh
Confidence 45789999999999999999999999 899999999776322 1122221 00011122333321111
Q ss_pred --CCCeEEEeccccCcc-------hhHHHHhHhhHHHHHHHHHHH
Q psy897 81 --TQRIRFIFLATLRFD-------EELKIAIRTNICATQTVVKLA 116 (125)
Q Consensus 81 --~~~~Vih~a~~~~~~-------~~~~~~~~~Nv~g~~~l~~~~ 116 (125)
..|++||+||..... ++|+..+++|+.|..+..++.
T Consensus 79 ~g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~av 123 (246)
T COG4221 79 FGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAV 123 (246)
T ss_pred hCcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 348999999986222 679999999999998887764
No 75
>PRK09135 pteridine reductase; Provisional
Probab=99.32 E-value=1.3e-11 Score=83.80 Aligned_cols=104 Identities=13% Similarity=0.089 Sum_probs=66.9
Q ss_pred CCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCC--HHHHHHHhhh-ccCChhhhhhhhcCcc--------
Q psy897 12 KDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVS--PQERIEKMLD-NEGPIFKDFANLVRLK-------- 80 (125)
Q Consensus 12 ~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~--~~~~~~~~~~-~~~~~~~~l~~~~~l~-------- 80 (125)
.+++++||||+|+||++++++|++. +++|++++|...... ....+.+... ....+..|+.+...+.
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~---g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 81 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAA---GYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVA 81 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC---CCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 4589999999999999999999998 799999988543210 0111111100 0011122333221111
Q ss_pred ---CCCeEEEeccccCc-------chhHHHHhHhhHHHHHHHHHHHhh
Q psy897 81 ---TQRIRFIFLATLRF-------DEELKIAIRTNICATQTVVKLAKQ 118 (125)
Q Consensus 81 ---~~~~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~~~ 118 (125)
..|+|||+||.... .+++...+++|+.|+.++++++..
T Consensus 82 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~ 129 (249)
T PRK09135 82 AFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAP 129 (249)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHH
Confidence 23899999997421 235677889999999999998853
No 76
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=99.32 E-value=5.4e-12 Score=86.57 Aligned_cols=105 Identities=10% Similarity=0.076 Sum_probs=64.2
Q ss_pred ccCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhccCChhhhhhhhcCc----------
Q psy897 10 FYKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDNEGPIFKDFANLVRL---------- 79 (125)
Q Consensus 10 ~~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l---------- 79 (125)
.+++|+++||||+|+||+++++.|+++ |++|++++|+.........+.........+..|+.+...+
T Consensus 5 ~~~~k~vlVtGas~gIG~~la~~l~~~---G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (260)
T PRK12823 5 RFAGKVVVVTGAAQGIGRGVALRAAAE---GARVVLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEA 81 (260)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHC---CCEEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHH
Confidence 367899999999999999999999998 7999999986421111111111100000111122221110
Q ss_pred -cCCCeEEEeccccCc--------chhHHHHhHhhHHHHHHHHHHHh
Q psy897 80 -KTQRIRFIFLATLRF--------DEELKIAIRTNICATQTVVKLAK 117 (125)
Q Consensus 80 -~~~~~Vih~a~~~~~--------~~~~~~~~~~Nv~g~~~l~~~~~ 117 (125)
...|+|||+||.... .+++...+++|+.++..+++.+.
T Consensus 82 ~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 128 (260)
T PRK12823 82 FGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVL 128 (260)
T ss_pred cCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHH
Confidence 023799999985311 14567778899999887665443
No 77
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=99.31 E-value=8.5e-12 Score=85.50 Aligned_cols=103 Identities=12% Similarity=0.068 Sum_probs=67.6
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhccCChhhhhhhhcCc-----------
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDNEGPIFKDFANLVRL----------- 79 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l----------- 79 (125)
+.+++++||||+|+||.++++.|+++ |++|++++|+.... .....+.......+..|+.+...+
T Consensus 4 l~~~~vlItGas~~iG~~ia~~l~~~---G~~v~~~~r~~~~~--~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (257)
T PRK07067 4 LQGKVALLTGAASGIGEAVAERYLAE---GARVVIADIKPARA--RLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERF 78 (257)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHc---CCEEEEEcCCHHHH--HHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 45789999999999999999999998 79999998865421 111111111000111122221111
Q ss_pred cCCCeEEEeccccCc-------chhHHHHhHhhHHHHHHHHHHHhh
Q psy897 80 KTQRIRFIFLATLRF-------DEELKIAIRTNICATQTVVKLAKQ 118 (125)
Q Consensus 80 ~~~~~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~~~ 118 (125)
...|+|||+||.... .++++..+++|+.++.++++++..
T Consensus 79 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 124 (257)
T PRK07067 79 GGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVAR 124 (257)
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHH
Confidence 123799999997522 245777889999999999998753
No 78
>PRK06180 short chain dehydrogenase; Provisional
Probab=99.31 E-value=9.8e-12 Score=86.25 Aligned_cols=99 Identities=13% Similarity=0.091 Sum_probs=65.0
Q ss_pred CCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhh-ccCChhhhhhhhcCcc----------
Q psy897 12 KDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLD-NEGPIFKDFANLVRLK---------- 80 (125)
Q Consensus 12 ~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~l~---------- 80 (125)
.+|+++||||+|+||+++++.|++. |++|++++|++... ..+..... ....+..|+.+...+.
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~---G~~V~~~~r~~~~~---~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~ 76 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAA---GHRVVGTVRSEAAR---ADFEALHPDRALARLLDVTDFDAIDAVVADAEATF 76 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhC---cCEEEEEeCCHHHH---HHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Confidence 3678999999999999999999998 79999999865421 11111100 0001111222211110
Q ss_pred -CCCeEEEeccccCc-------chhHHHHhHhhHHHHHHHHHHH
Q psy897 81 -TQRIRFIFLATLRF-------DEELKIAIRTNICATQTVVKLA 116 (125)
Q Consensus 81 -~~~~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~ 116 (125)
..|+|||+||.... .+.+...+++|+.|+.++++++
T Consensus 77 ~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~ 120 (277)
T PRK06180 77 GPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAV 120 (277)
T ss_pred CCCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHH
Confidence 13799999998532 1346677899999999999974
No 79
>PRK07774 short chain dehydrogenase; Provisional
Probab=99.31 E-value=6.9e-12 Score=85.43 Aligned_cols=105 Identities=14% Similarity=0.076 Sum_probs=67.4
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCC-CHHHHHHHhhhccCChhhhhhhhcCc----------
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGV-SPQERIEKMLDNEGPIFKDFANLVRL---------- 79 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~l---------- 79 (125)
+++|+++||||+|+||+++++.|++. |++|++++|+.... ...+.+.........+..|+.+...+
T Consensus 4 ~~~k~vlItGasg~iG~~la~~l~~~---g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 80 (250)
T PRK07774 4 FDDKVAIVTGAAGGIGQAYAEALARE---GASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSA 80 (250)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHC---CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 45789999999999999999999998 79999999865421 11111111000000111233322111
Q ss_pred -cCCCeEEEeccccCc----------chhHHHHhHhhHHHHHHHHHHHhh
Q psy897 80 -KTQRIRFIFLATLRF----------DEELKIAIRTNICATQTVVKLAKQ 118 (125)
Q Consensus 80 -~~~~~Vih~a~~~~~----------~~~~~~~~~~Nv~g~~~l~~~~~~ 118 (125)
...|+|||+||.... .+.+...+++|+.++.++++++..
T Consensus 81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 130 (250)
T PRK07774 81 FGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYK 130 (250)
T ss_pred hCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 023899999997421 134566788999999999998764
No 80
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=99.31 E-value=4.6e-12 Score=86.79 Aligned_cols=103 Identities=14% Similarity=0.043 Sum_probs=66.8
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhccCChhhhhhhhcCcc----------
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDNEGPIFKDFANLVRLK---------- 80 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~---------- 80 (125)
+++|+++||||+|+||++++++|++. |++|++++|.... .....+.....+...+..|+.+...++
T Consensus 6 l~~k~~lItGas~gIG~aia~~l~~~---G~~vv~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 81 (251)
T PRK12481 6 LNGKVAIITGCNTGLGQGMAIGLAKA---GADIVGVGVAEAP-ETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVM 81 (251)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHC---CCEEEEecCchHH-HHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHc
Confidence 56899999999999999999999998 7999988775321 111122211110001111222221111
Q ss_pred -CCCeEEEeccccCc-------chhHHHHhHhhHHHHHHHHHHHh
Q psy897 81 -TQRIRFIFLATLRF-------DEELKIAIRTNICATQTVVKLAK 117 (125)
Q Consensus 81 -~~~~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~~ 117 (125)
..|++||+||.... .++++..+++|+.++..+.+++.
T Consensus 82 g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~ 126 (251)
T PRK12481 82 GHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVA 126 (251)
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHH
Confidence 23899999997521 25678888999999999988654
No 81
>PRK05867 short chain dehydrogenase; Provisional
Probab=99.31 E-value=5.2e-12 Score=86.42 Aligned_cols=104 Identities=14% Similarity=0.109 Sum_probs=67.0
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCC-HHHHHHHhhhccCChhhhhhhhcCc----------
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVS-PQERIEKMLDNEGPIFKDFANLVRL---------- 79 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~l---------- 79 (125)
+++|+++||||+|+||.++++.|++. |++|++++|+..... ....+.........+..|+.+...+
T Consensus 7 ~~~k~vlVtGas~gIG~~ia~~l~~~---G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (253)
T PRK05867 7 LHGKRALITGASTGIGKRVALAYVEA---GAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAE 83 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC---CCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence 56899999999999999999999998 799999988654211 1111111000000111222221111
Q ss_pred -cCCCeEEEeccccCc-------chhHHHHhHhhHHHHHHHHHHHh
Q psy897 80 -KTQRIRFIFLATLRF-------DEELKIAIRTNICATQTVVKLAK 117 (125)
Q Consensus 80 -~~~~~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~~ 117 (125)
...|++||+||.... .+.++..+++|+.++..+++++.
T Consensus 84 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 129 (253)
T PRK05867 84 LGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAA 129 (253)
T ss_pred hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHH
Confidence 023899999997532 14577788999999999988764
No 82
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=99.31 E-value=1e-11 Score=86.96 Aligned_cols=103 Identities=20% Similarity=0.279 Sum_probs=65.1
Q ss_pred eEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhh--ccCChhhhhhhhcCcc------CCCeEE
Q psy897 15 VIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLD--NEGPIFKDFANLVRLK------TQRIRF 86 (125)
Q Consensus 15 ~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~l~------~~~~Vi 86 (125)
+|+||||||+||++++++|++..+ .++|++++|..... .......... ....+..|+.+...+. ..|+||
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~-~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi 78 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHP-DAEVIVLDKLTYAG-NLENLADLEDNPRYRFVKGDIGDRELVSRLFTEHQPDAVV 78 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCC-CCEEEEecCCCcch-hhhhhhhhccCCCcEEEEcCCcCHHHHHHHHhhcCCCEEE
Confidence 589999999999999999999821 27888887642210 1111111111 0011112333322211 148999
Q ss_pred EeccccCcc---hhHHHHhHhhHHHHHHHHHHHhhC
Q psy897 87 IFLATLRFD---EELKIAIRTNICATQTVVKLAKQC 119 (125)
Q Consensus 87 h~a~~~~~~---~~~~~~~~~Nv~g~~~l~~~~~~~ 119 (125)
|+||..... .++...+++|+.++.+++++|++.
T Consensus 79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 114 (317)
T TIGR01181 79 HFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKY 114 (317)
T ss_pred EcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhc
Confidence 999986432 345677899999999999999874
No 83
>PRK08278 short chain dehydrogenase; Provisional
Probab=99.31 E-value=9.9e-12 Score=86.15 Aligned_cols=105 Identities=13% Similarity=0.130 Sum_probs=67.4
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCC-CHHHHHH----Hhhh---ccCChhhhhhhhcCcc--
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGV-SPQERIE----KMLD---NEGPIFKDFANLVRLK-- 80 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~-~~~~~~~----~~~~---~~~~~~~~l~~~~~l~-- 80 (125)
+++|+++||||+|+||+++++.|+++ |++|++++|+.... .....+. ++.. ....+..|+.+...+.
T Consensus 4 ~~~k~vlItGas~gIG~~ia~~l~~~---G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~ 80 (273)
T PRK08278 4 LSGKTLFITGASRGIGLAIALRAARD---GANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAA 80 (273)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC---CCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHH
Confidence 45789999999999999999999998 79999999865421 1111111 1100 0001111222211110
Q ss_pred ---------CCCeEEEeccccCc-------chhHHHHhHhhHHHHHHHHHHHhh
Q psy897 81 ---------TQRIRFIFLATLRF-------DEELKIAIRTNICATQTVVKLAKQ 118 (125)
Q Consensus 81 ---------~~~~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~~~ 118 (125)
..|+|||+||.... .++++..+++|+.++.++++++..
T Consensus 81 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~ 134 (273)
T PRK08278 81 VAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLP 134 (273)
T ss_pred HHHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHH
Confidence 23899999998522 145677889999999999998753
No 84
>PRK07063 short chain dehydrogenase; Provisional
Probab=99.30 E-value=1.5e-11 Score=84.47 Aligned_cols=102 Identities=9% Similarity=0.070 Sum_probs=67.5
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhh-----ccCChhhhhhhhcCcc-----
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLD-----NEGPIFKDFANLVRLK----- 80 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~~~l~----- 80 (125)
+++|+++||||+|+||.++++.|++. |++|++++|++... .+...++.. ....+..|+.+...+.
T Consensus 5 l~~k~vlVtGas~gIG~~~a~~l~~~---G~~vv~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 79 (260)
T PRK07063 5 LAGKVALVTGAAQGIGAAIARAFARE---GAAVALADLDAALA--ERAAAAIARDVAGARVLAVPADVTDAASVAAAVAA 79 (260)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHC---CCEEEEEeCCHHHH--HHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHH
Confidence 57899999999999999999999998 79999999865421 111111111 0001112222211110
Q ss_pred ------CCCeEEEeccccCc-------chhHHHHhHhhHHHHHHHHHHHh
Q psy897 81 ------TQRIRFIFLATLRF-------DEELKIAIRTNICATQTVVKLAK 117 (125)
Q Consensus 81 ------~~~~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~~ 117 (125)
..|++||+||.... .+++...+++|+.++.++++++.
T Consensus 80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 129 (260)
T PRK07063 80 AEEAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVL 129 (260)
T ss_pred HHHHhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHH
Confidence 23799999997522 24677888999999999988754
No 85
>PRK08589 short chain dehydrogenase; Validated
Probab=99.30 E-value=6.4e-12 Score=87.02 Aligned_cols=103 Identities=12% Similarity=0.094 Sum_probs=65.7
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCC-CHHHHHHHhhhccCChhhhhhhhcCcc---------
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGV-SPQERIEKMLDNEGPIFKDFANLVRLK--------- 80 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~l~--------- 80 (125)
+++|+++||||+|+||+++++.|++. |++|++++|+ ... .....+.+...+...+..|+.+...+.
T Consensus 4 l~~k~vlItGas~gIG~aia~~l~~~---G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 79 (272)
T PRK08589 4 LENKVAVITGASTGIGQASAIALAQE---GAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQ 79 (272)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC---CCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHH
Confidence 46899999999999999999999998 7999999987 311 111122111110011112222221111
Q ss_pred --CCCeEEEeccccCc--------chhHHHHhHhhHHHHHHHHHHHh
Q psy897 81 --TQRIRFIFLATLRF--------DEELKIAIRTNICATQTVVKLAK 117 (125)
Q Consensus 81 --~~~~Vih~a~~~~~--------~~~~~~~~~~Nv~g~~~l~~~~~ 117 (125)
..|++||+||.... .+.++..+++|+.++..+++++.
T Consensus 80 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 126 (272)
T PRK08589 80 FGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLL 126 (272)
T ss_pred cCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 23899999997521 13467788899999988877644
No 86
>PRK08265 short chain dehydrogenase; Provisional
Probab=99.30 E-value=1.5e-11 Score=84.64 Aligned_cols=103 Identities=14% Similarity=0.146 Sum_probs=67.4
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhccCChhhhhhhhcCc-----------
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDNEGPIFKDFANLVRL----------- 79 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l----------- 79 (125)
+++|+++||||+|+||+++++.|++. |++|++++|+.... .....+.......+..|+.+...+
T Consensus 4 ~~~k~vlItGas~gIG~~ia~~l~~~---G~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 78 (261)
T PRK08265 4 LAGKVAIVTGGATLIGAAVARALVAA---GARVAIVDIDADNG--AAVAASLGERARFIATDITDDAAIERAVATVVARF 78 (261)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC---CCEEEEEeCCHHHH--HHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHh
Confidence 46799999999999999999999998 79999999865421 111111111001111222221111
Q ss_pred cCCCeEEEeccccC------cchhHHHHhHhhHHHHHHHHHHHhh
Q psy897 80 KTQRIRFIFLATLR------FDEELKIAIRTNICATQTVVKLAKQ 118 (125)
Q Consensus 80 ~~~~~Vih~a~~~~------~~~~~~~~~~~Nv~g~~~l~~~~~~ 118 (125)
...|+|||+||... ..+++...+++|+.++..+++.+..
T Consensus 79 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 123 (261)
T PRK08265 79 GRVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHP 123 (261)
T ss_pred CCCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHH
Confidence 02389999999742 1246778889999999999887643
No 87
>PRK06841 short chain dehydrogenase; Provisional
Probab=99.30 E-value=6e-12 Score=86.03 Aligned_cols=102 Identities=14% Similarity=0.170 Sum_probs=66.7
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhc-cCChhhhhhhhcCc----------
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDN-EGPIFKDFANLVRL---------- 79 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~l---------- 79 (125)
+++++++||||+|+||+++++.|+++ |++|++++|+.... ....+.... ...+..|+.+...+
T Consensus 13 ~~~k~vlItGas~~IG~~la~~l~~~---G~~Vi~~~r~~~~~---~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (255)
T PRK06841 13 LSGKVAVVTGGASGIGHAIAELFAAK---GARVALLDRSEDVA---EVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISA 86 (255)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC---CCEEEEEeCCHHHH---HHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 56899999999999999999999998 79999999865421 111111110 00111122211111
Q ss_pred -cCCCeEEEeccccCc-------chhHHHHhHhhHHHHHHHHHHHhh
Q psy897 80 -KTQRIRFIFLATLRF-------DEELKIAIRTNICATQTVVKLAKQ 118 (125)
Q Consensus 80 -~~~~~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~~~ 118 (125)
...|+|||++|.... .+.+...+++|+.|+.++++++..
T Consensus 87 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 133 (255)
T PRK06841 87 FGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGR 133 (255)
T ss_pred hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHH
Confidence 023899999998532 135667889999999999998754
No 88
>PRK08628 short chain dehydrogenase; Provisional
Probab=99.30 E-value=1.1e-11 Score=85.00 Aligned_cols=105 Identities=13% Similarity=0.066 Sum_probs=67.9
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhccCChhhhhhhhcCcc----------
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDNEGPIFKDFANLVRLK---------- 80 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~---------- 80 (125)
+++++++||||+|+||+++++.|++. |.++++++|+++.......+.....+......|+.+...+.
T Consensus 5 l~~~~ilItGasggiG~~la~~l~~~---G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (258)
T PRK08628 5 LKDKVVIVTGGASGIGAAISLRLAEE---GAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKF 81 (258)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHc---CCcEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhc
Confidence 56899999999999999999999998 78999998876532111122111110001111222211110
Q ss_pred -CCCeEEEeccccCc------chhHHHHhHhhHHHHHHHHHHHhh
Q psy897 81 -TQRIRFIFLATLRF------DEELKIAIRTNICATQTVVKLAKQ 118 (125)
Q Consensus 81 -~~~~Vih~a~~~~~------~~~~~~~~~~Nv~g~~~l~~~~~~ 118 (125)
..|+|||+||.... .+++...+++|+.++.++.+.+.+
T Consensus 82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 126 (258)
T PRK08628 82 GRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLP 126 (258)
T ss_pred CCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 23899999996421 145677888999999999887653
No 89
>PRK06114 short chain dehydrogenase; Provisional
Probab=99.30 E-value=1.1e-11 Score=84.97 Aligned_cols=104 Identities=13% Similarity=0.110 Sum_probs=66.8
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCC--CHHHHHHHhhhccCChhhhhhhhcCcc--------
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGV--SPQERIEKMLDNEGPIFKDFANLVRLK-------- 80 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~l~-------- 80 (125)
+++|+++||||+|+||++++++|++. |++|++++|+.... ...+.+.........+..|+.++..+.
T Consensus 6 ~~~k~~lVtG~s~gIG~~ia~~l~~~---G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~ 82 (254)
T PRK06114 6 LDGQVAFVTGAGSGIGQRIAIGLAQA---GADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEA 82 (254)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC---CCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 56899999999999999999999998 79999999865321 111111111110001112222221111
Q ss_pred ---CCCeEEEeccccCc-------chhHHHHhHhhHHHHHHHHHHHh
Q psy897 81 ---TQRIRFIFLATLRF-------DEELKIAIRTNICATQTVVKLAK 117 (125)
Q Consensus 81 ---~~~~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~~ 117 (125)
..|+|||+||.... .++++..+++|+.+++.+++++.
T Consensus 83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 129 (254)
T PRK06114 83 ELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEA 129 (254)
T ss_pred HcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHH
Confidence 23799999998532 24577888999999988877653
No 90
>PRK06128 oxidoreductase; Provisional
Probab=99.30 E-value=1.8e-11 Score=85.88 Aligned_cols=104 Identities=13% Similarity=0.106 Sum_probs=67.1
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhc----cCChhhhhhhhcCc-------
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDN----EGPIFKDFANLVRL------- 79 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~----~~~~~~~l~~~~~l------- 79 (125)
+++|+++||||+|+||+++++.|++. |++|++..++....... ...+.... ...+..|+.+...+
T Consensus 53 l~~k~vlITGas~gIG~~~a~~l~~~---G~~V~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~ 128 (300)
T PRK06128 53 LQGRKALITGADSGIGRATAIAFARE---GADIALNYLPEEEQDAA-EVVQLIQAEGRKAVALPGDLKDEAFCRQLVERA 128 (300)
T ss_pred cCCCEEEEecCCCcHHHHHHHHHHHc---CCEEEEEeCCcchHHHH-HHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHH
Confidence 56799999999999999999999998 78888876644321111 11111110 00011122221111
Q ss_pred ----cCCCeEEEeccccC----c----chhHHHHhHhhHHHHHHHHHHHhh
Q psy897 80 ----KTQRIRFIFLATLR----F----DEELKIAIRTNICATQTVVKLAKQ 118 (125)
Q Consensus 80 ----~~~~~Vih~a~~~~----~----~~~~~~~~~~Nv~g~~~l~~~~~~ 118 (125)
...|+|||+||... . .++++..+++|+.|++++++++..
T Consensus 129 ~~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~ 179 (300)
T PRK06128 129 VKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIP 179 (300)
T ss_pred HHHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 02389999999741 1 246788899999999999998764
No 91
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.29 E-value=1e-11 Score=84.89 Aligned_cols=102 Identities=13% Similarity=-0.010 Sum_probs=65.3
Q ss_pred CceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhh---hccCChhhhhhhhcCc----------
Q psy897 13 DGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKML---DNEGPIFKDFANLVRL---------- 79 (125)
Q Consensus 13 ~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~l---------- 79 (125)
+|+++||||+|+||+++++.|+++ +++|++++|..... .......+. .....+..|+.+...+
T Consensus 2 ~k~vlItG~sg~iG~~la~~L~~~---g~~vi~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 77 (256)
T PRK12745 2 RPVALVTGGRRGIGLGIARALAAA---GFDLAINDRPDDEE-LAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAA 77 (256)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHC---CCEEEEEecCchhH-HHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHh
Confidence 378999999999999999999998 78999998764321 111111111 1001111233221111
Q ss_pred -cCCCeEEEeccccCc---------chhHHHHhHhhHHHHHHHHHHHhh
Q psy897 80 -KTQRIRFIFLATLRF---------DEELKIAIRTNICATQTVVKLAKQ 118 (125)
Q Consensus 80 -~~~~~Vih~a~~~~~---------~~~~~~~~~~Nv~g~~~l~~~~~~ 118 (125)
...|+|||+||.... .+.++..+++|+.++.++++++.+
T Consensus 78 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 126 (256)
T PRK12745 78 WGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAK 126 (256)
T ss_pred cCCCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHH
Confidence 123799999997421 145677889999999999887643
No 92
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=99.29 E-value=9.2e-12 Score=85.42 Aligned_cols=105 Identities=12% Similarity=0.065 Sum_probs=67.4
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCC-HHHHHHHhhhccCChhhhhhhhcCc----------
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVS-PQERIEKMLDNEGPIFKDFANLVRL---------- 79 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~l---------- 79 (125)
+++|+++||||+|+||+++++.|++. |++|++++|+..... ..+.+.........+..|+.+...+
T Consensus 10 ~~~k~ilItGa~g~IG~~la~~l~~~---G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~ 86 (259)
T PRK08213 10 LSGKTALVTGGSRGLGLQIAEALGEA---GARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLER 86 (259)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence 46899999999999999999999998 789999988654211 1111111000000111222222111
Q ss_pred -cCCCeEEEeccccCc-------chhHHHHhHhhHHHHHHHHHHHhh
Q psy897 80 -KTQRIRFIFLATLRF-------DEELKIAIRTNICATQTVVKLAKQ 118 (125)
Q Consensus 80 -~~~~~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~~~ 118 (125)
...|+|||+||.... .+.++..+++|+.++.++++++.+
T Consensus 87 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 133 (259)
T PRK08213 87 FGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAK 133 (259)
T ss_pred hCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHH
Confidence 023799999997421 245677888999999999997754
No 93
>PRK06482 short chain dehydrogenase; Provisional
Probab=99.29 E-value=1.3e-11 Score=85.37 Aligned_cols=97 Identities=19% Similarity=0.232 Sum_probs=63.5
Q ss_pred ceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhh-ccCChhhhhhhhcC-----------ccC
Q psy897 14 GVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLD-NEGPIFKDFANLVR-----------LKT 81 (125)
Q Consensus 14 ~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~-----------l~~ 81 (125)
|+++||||+|+||++++++|+++ +++|++++|++... ..+..... ....+..|+.+... ...
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~---g~~v~~~~r~~~~~---~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 76 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLAR---GDRVAATVRRPDAL---DDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGR 76 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHC---CCEEEEEeCCHHHH---HHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 68999999999999999999998 79999998864321 11111101 00001112221111 112
Q ss_pred CCeEEEeccccCc-------chhHHHHhHhhHHHHHHHHHHH
Q psy897 82 QRIRFIFLATLRF-------DEELKIAIRTNICATQTVVKLA 116 (125)
Q Consensus 82 ~~~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~ 116 (125)
.|+|||+||.... .+.++..+++|+.++.++++++
T Consensus 77 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~ 118 (276)
T PRK06482 77 IDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAA 118 (276)
T ss_pred CCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHH
Confidence 3899999998632 1346678889999999999987
No 94
>PRK06196 oxidoreductase; Provisional
Probab=99.28 E-value=1.8e-11 Score=86.51 Aligned_cols=100 Identities=15% Similarity=0.147 Sum_probs=64.6
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhccCChhhhhhhhcCc-----------
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDNEGPIFKDFANLVRL----------- 79 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l----------- 79 (125)
+++|+++||||+|+||++++++|++. |++|++++|+.... .+...++.. ...+..|+.+...+
T Consensus 24 l~~k~vlITGasggIG~~~a~~L~~~---G~~Vv~~~R~~~~~--~~~~~~l~~-v~~~~~Dl~d~~~v~~~~~~~~~~~ 97 (315)
T PRK06196 24 LSGKTAIVTGGYSGLGLETTRALAQA---GAHVIVPARRPDVA--REALAGIDG-VEVVMLDLADLESVRAFAERFLDSG 97 (315)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC---CCEEEEEeCCHHHH--HHHHHHhhh-CeEEEccCCCHHHHHHHHHHHHhcC
Confidence 46799999999999999999999998 79999999865421 111111100 01111222221111
Q ss_pred cCCCeEEEeccccCc-----chhHHHHhHhhHHHHHHHHHHH
Q psy897 80 KTQRIRFIFLATLRF-----DEELKIAIRTNICATQTVVKLA 116 (125)
Q Consensus 80 ~~~~~Vih~a~~~~~-----~~~~~~~~~~Nv~g~~~l~~~~ 116 (125)
...|+|||+||.... .+.++..+++|+.|+..+++.+
T Consensus 98 ~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~l 139 (315)
T PRK06196 98 RRIDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLL 139 (315)
T ss_pred CCCCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHH
Confidence 023899999997521 2456778899999987776643
No 95
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=99.28 E-value=2.2e-11 Score=83.84 Aligned_cols=103 Identities=19% Similarity=0.192 Sum_probs=68.0
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCC-HHHHHHHhhhc-cCChhhhhhhhcCcc--------
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVS-PQERIEKMLDN-EGPIFKDFANLVRLK-------- 80 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~-~~~~~~~~~~~-~~~~~~~l~~~~~l~-------- 80 (125)
.++++++|||||++||.++++.|+++ |++++++.|+.+... ..+++++-..- ...+..|+.+..+++
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~---g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~ 80 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARR---GYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKE 80 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHC---CCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHh
Confidence 45789999999999999999999999 899999999877432 22233321100 001112333221111
Q ss_pred ---CCCeEEEeccccCcc-------hhHHHHhHhhHHHHHHHHHHH
Q psy897 81 ---TQRIRFIFLATLRFD-------EELKIAIRTNICATQTVVKLA 116 (125)
Q Consensus 81 ---~~~~Vih~a~~~~~~-------~~~~~~~~~Nv~g~~~l~~~~ 116 (125)
..|++|||||...+. +...+.+++|+.+...|..+.
T Consensus 81 ~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~ 126 (265)
T COG0300 81 RGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAV 126 (265)
T ss_pred cCCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHH
Confidence 237999999996322 345567789999988876653
No 96
>PRK08263 short chain dehydrogenase; Provisional
Probab=99.28 E-value=1.8e-11 Score=84.85 Aligned_cols=99 Identities=17% Similarity=0.191 Sum_probs=64.6
Q ss_pred CCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhh-ccCChhhhhhhhcC-----------c
Q psy897 12 KDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLD-NEGPIFKDFANLVR-----------L 79 (125)
Q Consensus 12 ~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~-----------l 79 (125)
.+|+++||||+|+||+++++.|++. +++|++++|++... ..+.+... ....+..|+.+... +
T Consensus 2 ~~k~vlItGasg~iG~~~a~~l~~~---g~~V~~~~r~~~~~---~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 75 (275)
T PRK08263 2 MEKVWFITGASRGFGRAWTEAALER---GDRVVATARDTATL---ADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHF 75 (275)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHC---CCEEEEEECCHHHH---HHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHc
Confidence 4678999999999999999999998 79999999865421 11111111 00000011111111 1
Q ss_pred cCCCeEEEeccccCc-------chhHHHHhHhhHHHHHHHHHHH
Q psy897 80 KTQRIRFIFLATLRF-------DEELKIAIRTNICATQTVVKLA 116 (125)
Q Consensus 80 ~~~~~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~ 116 (125)
...|+|||+||.... .++++..+++|+.++..+++++
T Consensus 76 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~ 119 (275)
T PRK08263 76 GRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAV 119 (275)
T ss_pred CCCCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHH
Confidence 123899999998632 1467788899999998888875
No 97
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.28 E-value=2.1e-11 Score=82.98 Aligned_cols=103 Identities=12% Similarity=0.105 Sum_probs=66.6
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhh--hccCChhhhhhhhcCc---------
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKML--DNEGPIFKDFANLVRL--------- 79 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~l--------- 79 (125)
+++++++||||+|+||+++++.|++. |++|++++|++.... .....+. .....+..|+.+...+
T Consensus 3 ~~~~~vlItGasg~iG~~l~~~l~~~---G~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 77 (251)
T PRK07231 3 LEGKVAIVTGASSGIGEGIARRFAAE---GARVVVTDRNEEAAE--RVAAEILAGGRAIAVAADVSDEADVEAAVAAALE 77 (251)
T ss_pred cCCcEEEEECCCChHHHHHHHHHHHC---CCEEEEEeCCHHHHH--HHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 46789999999999999999999998 799999999764321 1111111 0000111122221111
Q ss_pred --cCCCeEEEeccccCc--------chhHHHHhHhhHHHHHHHHHHHhh
Q psy897 80 --KTQRIRFIFLATLRF--------DEELKIAIRTNICATQTVVKLAKQ 118 (125)
Q Consensus 80 --~~~~~Vih~a~~~~~--------~~~~~~~~~~Nv~g~~~l~~~~~~ 118 (125)
...|+|||++|.... .+.+...+++|+.++.++++.+..
T Consensus 78 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 126 (251)
T PRK07231 78 RFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVP 126 (251)
T ss_pred HhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 123899999997421 145677889999998888876653
No 98
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=99.28 E-value=1.3e-11 Score=83.98 Aligned_cols=104 Identities=15% Similarity=0.122 Sum_probs=67.3
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCC-HHHHHHHhhhccCChhhhhhhhcCc----------
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVS-PQERIEKMLDNEGPIFKDFANLVRL---------- 79 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~l---------- 79 (125)
+.+|+++||||+|++|+++++.|+++ |++|++++|+..... ....+............|+.+...+
T Consensus 4 ~~~~~ilItGasg~iG~~l~~~l~~~---g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 80 (251)
T PRK12826 4 LEGRVALVTGAARGIGRAIAVRLAAD---GAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVED 80 (251)
T ss_pred CCCCEEEEcCCCCcHHHHHHHHHHHC---CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 45789999999999999999999998 799999999754211 1111111100000111122221111
Q ss_pred -cCCCeEEEeccccCc-------chhHHHHhHhhHHHHHHHHHHHh
Q psy897 80 -KTQRIRFIFLATLRF-------DEELKIAIRTNICATQTVVKLAK 117 (125)
Q Consensus 80 -~~~~~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~~ 117 (125)
...|+|||++|.... .+++...+++|+.++.++++++.
T Consensus 81 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 126 (251)
T PRK12826 81 FGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAAL 126 (251)
T ss_pred hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence 123799999988643 14567788999999999998774
No 99
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=99.27 E-value=2e-11 Score=88.95 Aligned_cols=102 Identities=16% Similarity=0.143 Sum_probs=66.9
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhccCChhhhhhhhcCc----cCCCeEE
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDNEGPIFKDFANLVRL----KTQRIRF 86 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l----~~~~~Vi 86 (125)
+++|+++||||+|+||++++++|.+. |.+|++++|++... .............+..|+.+...+ ...|++|
T Consensus 176 l~gK~VLITGASgGIG~aLA~~La~~---G~~Vi~l~r~~~~l--~~~~~~~~~~v~~v~~Dvsd~~~v~~~l~~IDiLI 250 (406)
T PRK07424 176 LKGKTVAVTGASGTLGQALLKELHQQ---GAKVVALTSNSDKI--TLEINGEDLPVKTLHWQVGQEAALAELLEKVDILI 250 (406)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC---CCEEEEEeCCHHHH--HHHHhhcCCCeEEEEeeCCCHHHHHHHhCCCCEEE
Confidence 46899999999999999999999998 79999998865321 111111000000111223222111 1238999
Q ss_pred EeccccCc----chhHHHHhHhhHHHHHHHHHHHh
Q psy897 87 IFLATLRF----DEELKIAIRTNICATQTVVKLAK 117 (125)
Q Consensus 87 h~a~~~~~----~~~~~~~~~~Nv~g~~~l~~~~~ 117 (125)
|+||.... .++++..+++|+.|+.++++++.
T Consensus 251 nnAGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~l 285 (406)
T PRK07424 251 INHGINVHGERTPEAINKSYEVNTFSAWRLMELFF 285 (406)
T ss_pred ECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99997522 24567788999999999999764
No 100
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=99.27 E-value=9.5e-12 Score=88.10 Aligned_cols=103 Identities=15% Similarity=0.137 Sum_probs=66.4
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhh---ccCChhhhhhhhcCcc-------
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLD---NEGPIFKDFANLVRLK------- 80 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~l~~~~~l~------- 80 (125)
.++|+++||||+|+||.++++.|++. |++|++++|+.... .....++.. ....+..|+.+...+.
T Consensus 4 ~~~k~vlVTGas~gIG~~~a~~L~~~---G~~V~~~~r~~~~~--~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 78 (322)
T PRK07453 4 DAKGTVIITGASSGVGLYAAKALAKR---GWHVIMACRNLKKA--EAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFR 78 (322)
T ss_pred CCCCEEEEEcCCChHHHHHHHHHHHC---CCEEEEEECCHHHH--HHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHH
Confidence 35789999999999999999999998 79999998864421 111111100 0001111222211110
Q ss_pred ----CCCeEEEeccccCc--------chhHHHHhHhhHHHHHHHHHHHhh
Q psy897 81 ----TQRIRFIFLATLRF--------DEELKIAIRTNICATQTVVKLAKQ 118 (125)
Q Consensus 81 ----~~~~Vih~a~~~~~--------~~~~~~~~~~Nv~g~~~l~~~~~~ 118 (125)
..|+|||+||.... .+.++..+++|+.|++++++++..
T Consensus 79 ~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~ 128 (322)
T PRK07453 79 ALGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLE 128 (322)
T ss_pred HhCCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 13899999996421 145777889999999999887653
No 101
>PRK07856 short chain dehydrogenase; Provisional
Probab=99.27 E-value=2.2e-11 Score=83.27 Aligned_cols=103 Identities=14% Similarity=0.114 Sum_probs=65.4
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHH----Hhhhc--cCChhhhhhhhcCccCCCe
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIE----KMLDN--EGPIFKDFANLVRLKTQRI 84 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~----~~~~~--~~~~~~~l~~~~~l~~~~~ 84 (125)
+++|+++||||+|+||+++++.|++. +++|++++|+.........+. ++.+. ....+..+.+. ....|+
T Consensus 4 ~~~k~~lItGas~gIG~~la~~l~~~---g~~v~~~~r~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~--~~~id~ 78 (252)
T PRK07856 4 LTGRVVLVTGGTRGIGAGIARAFLAA---GATVVVCGRRAPETVDGRPAEFHAADVRDPDQVAALVDAIVER--HGRLDV 78 (252)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC---CCEEEEEeCChhhhhcCCceEEEEccCCCHHHHHHHHHHHHHH--cCCCCE
Confidence 46899999999999999999999998 799999998653200000000 00000 00011111111 012289
Q ss_pred EEEeccccCc-------chhHHHHhHhhHHHHHHHHHHHhh
Q psy897 85 RFIFLATLRF-------DEELKIAIRTNICATQTVVKLAKQ 118 (125)
Q Consensus 85 Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~~~ 118 (125)
|||+||.... .+.++..+++|+.++..+++++..
T Consensus 79 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 119 (252)
T PRK07856 79 LVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANA 119 (252)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 9999997421 145677889999999999997653
No 102
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=99.27 E-value=1.5e-11 Score=83.77 Aligned_cols=104 Identities=13% Similarity=0.087 Sum_probs=65.4
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCC-HHHHHHHhhhccCChhhhhhhhcCc----------
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVS-PQERIEKMLDNEGPIFKDFANLVRL---------- 79 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~l---------- 79 (125)
+++++++||||+|+||++++++|++. +++|++++|+.+... ....+.........+..|+.+...+
T Consensus 1 ~~~~~ilItGas~~iG~~la~~l~~~---g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 77 (250)
T TIGR03206 1 LKDKTAIVTGGGGGIGGATCRRFAEE---GAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQA 77 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHC---CCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 35789999999999999999999998 799999988654211 0111111000000111122211111
Q ss_pred -cCCCeEEEeccccCc-------chhHHHHhHhhHHHHHHHHHHHh
Q psy897 80 -KTQRIRFIFLATLRF-------DEELKIAIRTNICATQTVVKLAK 117 (125)
Q Consensus 80 -~~~~~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~~ 117 (125)
...|+|||++|.... .+.++..+++|+.++.++++++.
T Consensus 78 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 123 (250)
T TIGR03206 78 LGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVL 123 (250)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 123799999997421 13456778999999999988764
No 103
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=99.26 E-value=1.4e-11 Score=84.77 Aligned_cols=102 Identities=17% Similarity=0.212 Sum_probs=65.9
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhh-ccCChhhhhhhhcC-----------
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLD-NEGPIFKDFANLVR----------- 78 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~----------- 78 (125)
+++|+++||||+|+||+++++.|++. |++|++++|+.... +.+..... ....+..|+.+...
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~~~---G~~V~~~~r~~~~~---~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 76 (262)
T TIGR03325 3 LKGEVVLVTGGASGLGRAIVDRFVAE---GARVAVLDKSAAGL---QELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAA 76 (262)
T ss_pred cCCcEEEEECCCChHHHHHHHHHHHC---CCEEEEEeCCHHHH---HHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHH
Confidence 45899999999999999999999998 79999998865321 11111100 00001112221110
Q ss_pred ccCCCeEEEeccccCc-------c-----hhHHHHhHhhHHHHHHHHHHHhh
Q psy897 79 LKTQRIRFIFLATLRF-------D-----EELKIAIRTNICATQTVVKLAKQ 118 (125)
Q Consensus 79 l~~~~~Vih~a~~~~~-------~-----~~~~~~~~~Nv~g~~~l~~~~~~ 118 (125)
+...|++||+||.... . +.++..+++|+.++..+++++.+
T Consensus 77 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~ 128 (262)
T TIGR03325 77 FGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALP 128 (262)
T ss_pred hCCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHH
Confidence 0123899999996321 1 24667889999999999998754
No 104
>PRK06179 short chain dehydrogenase; Provisional
Probab=99.26 E-value=1.1e-11 Score=85.43 Aligned_cols=95 Identities=12% Similarity=0.094 Sum_probs=64.5
Q ss_pred CCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhccCChhhhhhhhcCc-----------c
Q psy897 12 KDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDNEGPIFKDFANLVRL-----------K 80 (125)
Q Consensus 12 ~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l-----------~ 80 (125)
++++++||||+|+||++++++|+++ |++|++.+|+.........+ ..+..|+.+...+ .
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~---g~~V~~~~r~~~~~~~~~~~-------~~~~~D~~d~~~~~~~~~~~~~~~g 72 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARA---GYRVFGTSRNPARAAPIPGV-------ELLELDVTDDASVQAAVDEVIARAG 72 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHC---CCEEEEEeCChhhccccCCC-------eeEEeecCCHHHHHHHHHHHHHhCC
Confidence 4578999999999999999999998 79999999975432111000 0011122111110 0
Q ss_pred CCCeEEEeccccCc-------chhHHHHhHhhHHHHHHHHHHH
Q psy897 81 TQRIRFIFLATLRF-------DEELKIAIRTNICATQTVVKLA 116 (125)
Q Consensus 81 ~~~~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~ 116 (125)
..|+|||+||.... .++++..+++|+.|+.++++++
T Consensus 73 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~ 115 (270)
T PRK06179 73 RIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAV 115 (270)
T ss_pred CCCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHH
Confidence 23899999998532 2456788899999999998875
No 105
>PRK07478 short chain dehydrogenase; Provisional
Probab=99.26 E-value=2e-11 Score=83.56 Aligned_cols=103 Identities=16% Similarity=0.097 Sum_probs=64.8
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCC-HHHHHHHhhhccCChhhhhhhhcCc----------
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVS-PQERIEKMLDNEGPIFKDFANLVRL---------- 79 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~l---------- 79 (125)
+++|+++||||+|+||.++++.|++. |++|++++|++.... ....+.........+..|+.+...+
T Consensus 4 ~~~k~~lItGas~giG~~ia~~l~~~---G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 80 (254)
T PRK07478 4 LNGKVAIITGASSGIGRAAAKLFARE---GAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVER 80 (254)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHC---CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHh
Confidence 45789999999999999999999998 799999998754211 1111111100000111122221110
Q ss_pred -cCCCeEEEeccccCc--------chhHHHHhHhhHHHHHHHHHHH
Q psy897 80 -KTQRIRFIFLATLRF--------DEELKIAIRTNICATQTVVKLA 116 (125)
Q Consensus 80 -~~~~~Vih~a~~~~~--------~~~~~~~~~~Nv~g~~~l~~~~ 116 (125)
...|+|||+||.... .++++..+++|+.++..+.+++
T Consensus 81 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~ 126 (254)
T PRK07478 81 FGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQ 126 (254)
T ss_pred cCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHH
Confidence 023799999997421 1456778899999988886654
No 106
>PRK07814 short chain dehydrogenase; Provisional
Probab=99.26 E-value=1.5e-11 Score=84.63 Aligned_cols=105 Identities=15% Similarity=0.103 Sum_probs=67.4
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCC-HHHHHHHhhhccCChhhhhhhhcCc----------
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVS-PQERIEKMLDNEGPIFKDFANLVRL---------- 79 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~l---------- 79 (125)
+++++++||||+|+||.++++.|+++ |++|++++|++.... ....+.........+..|+.+...+
T Consensus 8 ~~~~~vlItGasggIG~~~a~~l~~~---G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 84 (263)
T PRK07814 8 LDDQVAVVTGAGRGLGAAIALAFAEA---GADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEA 84 (263)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC---CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 56899999999999999999999998 799999998654211 1111111000000011122221111
Q ss_pred -cCCCeEEEeccccCc-------chhHHHHhHhhHHHHHHHHHHHhh
Q psy897 80 -KTQRIRFIFLATLRF-------DEELKIAIRTNICATQTVVKLAKQ 118 (125)
Q Consensus 80 -~~~~~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~~~ 118 (125)
...|+|||+||.... .+++...+++|+.++.++.+++..
T Consensus 85 ~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 131 (263)
T PRK07814 85 FGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVP 131 (263)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHH
Confidence 123799999996421 145677889999999999998753
No 107
>PRK07806 short chain dehydrogenase; Provisional
Probab=99.26 E-value=5.9e-12 Score=85.74 Aligned_cols=105 Identities=12% Similarity=0.035 Sum_probs=66.4
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCC--HHHHHHHhhhccCChhhhhhhhcCc---------
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVS--PQERIEKMLDNEGPIFKDFANLVRL--------- 79 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~l--------- 79 (125)
+++++++||||+|+||+++++.|++. |++|++++|+..... ....+.........+..|+.+...+
T Consensus 4 ~~~k~vlItGasggiG~~l~~~l~~~---G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 80 (248)
T PRK07806 4 LPGKTALVTGSSRGIGADTAKILAGA---GAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTARE 80 (248)
T ss_pred CCCcEEEEECCCCcHHHHHHHHHHHC---CCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 45789999999999999999999998 799999888643210 0111111000000111222222111
Q ss_pred --cCCCeEEEeccccCc-chhHHHHhHhhHHHHHHHHHHHhh
Q psy897 80 --KTQRIRFIFLATLRF-DEELKIAIRTNICATQTVVKLAKQ 118 (125)
Q Consensus 80 --~~~~~Vih~a~~~~~-~~~~~~~~~~Nv~g~~~l~~~~~~ 118 (125)
...|+|||+||.... ..++...+++|+.++.++++++.+
T Consensus 81 ~~~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~ 122 (248)
T PRK07806 81 EFGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALP 122 (248)
T ss_pred hCCCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHh
Confidence 123799999987532 224566778999999999998875
No 108
>PRK08643 acetoin reductase; Validated
Probab=99.26 E-value=2.1e-11 Score=83.42 Aligned_cols=103 Identities=11% Similarity=0.088 Sum_probs=65.2
Q ss_pred CceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCC-HHHHHHHhhhccCChhhhhhhhcCcc-----------
Q psy897 13 DGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVS-PQERIEKMLDNEGPIFKDFANLVRLK----------- 80 (125)
Q Consensus 13 ~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~l~----------- 80 (125)
+|+++||||+|+||.++++.|++. |++|++++|+..... ....+.........+..|+.+...+.
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~---G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 78 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVED---GFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFG 78 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHC---CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 579999999999999999999998 799999998654211 11111111000001112222221110
Q ss_pred CCCeEEEeccccCc-------chhHHHHhHhhHHHHHHHHHHHhh
Q psy897 81 TQRIRFIFLATLRF-------DEELKIAIRTNICATQTVVKLAKQ 118 (125)
Q Consensus 81 ~~~~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~~~ 118 (125)
..|+|||+||.... .++++..+++|+.++..+++.+.+
T Consensus 79 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 123 (256)
T PRK08643 79 DLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQE 123 (256)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 23899999997521 145677889999999888776643
No 109
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=99.25 E-value=2.7e-11 Score=82.99 Aligned_cols=103 Identities=13% Similarity=0.031 Sum_probs=66.3
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhccCChhhhhhhhcCc-----------
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDNEGPIFKDFANLVRL----------- 79 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l----------- 79 (125)
+++|+++||||+|+||++++++|++. |++|+++++.... ...+.+.........+..|+.+...+
T Consensus 8 l~~k~~lItG~~~gIG~a~a~~l~~~---G~~vv~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 83 (253)
T PRK08993 8 LEGKVAVVTGCDTGLGQGMALGLAEA---GCDIVGINIVEPT-ETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEF 83 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC---CCEEEEecCcchH-HHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 56899999999999999999999998 7999887764321 11112221110000011122221111
Q ss_pred cCCCeEEEeccccCc-------chhHHHHhHhhHHHHHHHHHHHh
Q psy897 80 KTQRIRFIFLATLRF-------DEELKIAIRTNICATQTVVKLAK 117 (125)
Q Consensus 80 ~~~~~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~~ 117 (125)
...|++||+||.... .+++...+++|+.++.++++++.
T Consensus 84 ~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~ 128 (253)
T PRK08993 84 GHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAA 128 (253)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHH
Confidence 023899999997532 14678888999999999988764
No 110
>PRK06138 short chain dehydrogenase; Provisional
Probab=99.25 E-value=1.8e-11 Score=83.46 Aligned_cols=101 Identities=11% Similarity=0.048 Sum_probs=64.7
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhh--hccCChhhhhhhhcCc---------
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKML--DNEGPIFKDFANLVRL--------- 79 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~l--------- 79 (125)
+++|+++||||+|+||+++++.|++. |++|++++|+.... ......+. .....+..|+.+...+
T Consensus 3 ~~~k~~lItG~sg~iG~~la~~l~~~---G~~v~~~~r~~~~~--~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~ 77 (252)
T PRK06138 3 LAGRVAIVTGAGSGIGRATAKLFARE---GARVVVADRDAEAA--ERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAA 77 (252)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHC---CCeEEEecCCHHHH--HHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 45789999999999999999999998 79999998875421 11111110 0000111122221111
Q ss_pred --cCCCeEEEeccccCc-------chhHHHHhHhhHHHHHHHHHHH
Q psy897 80 --KTQRIRFIFLATLRF-------DEELKIAIRTNICATQTVVKLA 116 (125)
Q Consensus 80 --~~~~~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~ 116 (125)
...|+|||++|.... .+.+...+++|+.++.++.+.+
T Consensus 78 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~ 123 (252)
T PRK06138 78 RWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYA 123 (252)
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHH
Confidence 123899999997521 2346667899999998887765
No 111
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=99.25 E-value=2.2e-11 Score=83.31 Aligned_cols=103 Identities=15% Similarity=0.064 Sum_probs=67.4
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhh---ccCChhhhhhhhcCcc-------
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLD---NEGPIFKDFANLVRLK------- 80 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~l~~~~~l~------- 80 (125)
+.+|+++||||+|+||++++++|++. |++|++.+|+.... .....++.. .......|+.+...+.
T Consensus 7 l~~k~~lItGas~giG~~ia~~L~~~---G~~vvl~~r~~~~~--~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 81 (254)
T PRK08085 7 LAGKNILITGSAQGIGFLLATGLAEY---GAEIIINDITAERA--ELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIE 81 (254)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHc---CCEEEEEcCCHHHH--HHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHH
Confidence 46899999999999999999999998 79999998865421 111111111 0001111222211111
Q ss_pred ----CCCeEEEeccccCc-------chhHHHHhHhhHHHHHHHHHHHhh
Q psy897 81 ----TQRIRFIFLATLRF-------DEELKIAIRTNICATQTVVKLAKQ 118 (125)
Q Consensus 81 ----~~~~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~~~ 118 (125)
..|+|||+||.... .++++..+++|+.++..+++++.+
T Consensus 82 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 130 (254)
T PRK08085 82 KDIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVAR 130 (254)
T ss_pred HhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 23899999997521 256778889999999999887654
No 112
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=99.25 E-value=1.7e-11 Score=83.74 Aligned_cols=104 Identities=15% Similarity=0.067 Sum_probs=64.7
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCC-HHHHHHHhhhccCChhhhhhhhcCc----------
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVS-PQERIEKMLDNEGPIFKDFANLVRL---------- 79 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~l---------- 79 (125)
+++++++||||+|+||++++++|+++ |++|++++|++.... ....+.........+..|+.+...+
T Consensus 2 ~~~~~vlItG~sg~iG~~la~~l~~~---g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 78 (258)
T PRK12429 2 LKGKVALVTGAASGIGLEIALALAKE---GAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVET 78 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC---CCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 35689999999999999999999998 799999998755321 1111111000000111222221111
Q ss_pred -cCCCeEEEeccccCc-------chhHHHHhHhhHHHHHHHHHHHh
Q psy897 80 -KTQRIRFIFLATLRF-------DEELKIAIRTNICATQTVVKLAK 117 (125)
Q Consensus 80 -~~~~~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~~ 117 (125)
...|+|||+||.... .+.+...+++|+.++.++++.+.
T Consensus 79 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 124 (258)
T PRK12429 79 FGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAAL 124 (258)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHH
Confidence 123799999997532 13456677899999777766543
No 113
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=99.25 E-value=1.8e-11 Score=84.17 Aligned_cols=102 Identities=14% Similarity=0.129 Sum_probs=65.4
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhh-ccCChhhhhhhhcCc----------
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLD-NEGPIFKDFANLVRL---------- 79 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~l---------- 79 (125)
+++|+++||||+|+||+++++.|++. |++|++++|++... +.+..... ....+..|+.+...+
T Consensus 4 ~~~k~vlVtGas~gIG~~ia~~l~~~---G~~V~~~~r~~~~~---~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 77 (263)
T PRK06200 4 LHGQVALITGGGSGIGRALVERFLAE---GARVAVLERSAEKL---ASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDA 77 (263)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC---CCEEEEEeCCHHHH---HHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHh
Confidence 46799999999999999999999998 79999999865421 11111111 000111122211100
Q ss_pred -cCCCeEEEeccccCc-------c-h----hHHHHhHhhHHHHHHHHHHHhh
Q psy897 80 -KTQRIRFIFLATLRF-------D-E----ELKIAIRTNICATQTVVKLAKQ 118 (125)
Q Consensus 80 -~~~~~Vih~a~~~~~-------~-~----~~~~~~~~Nv~g~~~l~~~~~~ 118 (125)
...|++||+||.... . + .++..+++|+.++..+++++..
T Consensus 78 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 129 (263)
T PRK06200 78 FGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALP 129 (263)
T ss_pred cCCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHH
Confidence 023899999997421 1 1 2566778999999999887653
No 114
>PRK12939 short chain dehydrogenase; Provisional
Probab=99.25 E-value=2.6e-11 Score=82.47 Aligned_cols=105 Identities=10% Similarity=0.011 Sum_probs=67.1
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCC-HHHHHHHhhhccCChhhhhhhhcCc----------
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVS-PQERIEKMLDNEGPIFKDFANLVRL---------- 79 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~l---------- 79 (125)
+++|+++||||+|+||+++++.|+++ |++|++++|++.... ..+.+.........+..|+.+...+
T Consensus 5 ~~~~~vlItGa~g~iG~~la~~l~~~---G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 81 (250)
T PRK12939 5 LAGKRALVTGAARGLGAAFAEALAEA---GATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAA 81 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 46799999999999999999999998 799999987654211 1111111100001111122221111
Q ss_pred -cCCCeEEEeccccCc-------chhHHHHhHhhHHHHHHHHHHHhh
Q psy897 80 -KTQRIRFIFLATLRF-------DEELKIAIRTNICATQTVVKLAKQ 118 (125)
Q Consensus 80 -~~~~~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~~~ 118 (125)
...|+|||++|.... .+.++..+++|+.++.++++++..
T Consensus 82 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 128 (250)
T PRK12939 82 LGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALP 128 (250)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 123899999998532 135667788999999999987653
No 115
>PRK06057 short chain dehydrogenase; Provisional
Probab=99.25 E-value=3.6e-11 Score=82.39 Aligned_cols=100 Identities=12% Similarity=0.018 Sum_probs=65.0
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhccCChhhhhhhhcCc-----------
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDNEGPIFKDFANLVRL----------- 79 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l----------- 79 (125)
+++++++||||+|+||++++++|++. +++|++++|+.... .....+... .....|+.+...+
T Consensus 5 ~~~~~vlItGasggIG~~~a~~l~~~---G~~v~~~~r~~~~~--~~~~~~~~~--~~~~~D~~~~~~~~~~~~~~~~~~ 77 (255)
T PRK06057 5 LAGRVAVITGGGSGIGLATARRLAAE---GATVVVGDIDPEAG--KAAADEVGG--LFVPTDVTDEDAVNALFDTAAETY 77 (255)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHc---CCEEEEEeCCHHHH--HHHHHHcCC--cEEEeeCCCHHHHHHHHHHHHHHc
Confidence 67899999999999999999999998 79999998865421 111111100 0111122211110
Q ss_pred cCCCeEEEeccccCc---------chhHHHHhHhhHHHHHHHHHHHh
Q psy897 80 KTQRIRFIFLATLRF---------DEELKIAIRTNICATQTVVKLAK 117 (125)
Q Consensus 80 ~~~~~Vih~a~~~~~---------~~~~~~~~~~Nv~g~~~l~~~~~ 117 (125)
...|+|||+||.... .+.++..+++|+.|+..+++.+.
T Consensus 78 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 124 (255)
T PRK06057 78 GSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAAL 124 (255)
T ss_pred CCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHH
Confidence 123799999997521 13467788899999988877653
No 116
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.24 E-value=4.5e-11 Score=84.24 Aligned_cols=106 Identities=14% Similarity=0.017 Sum_probs=68.0
Q ss_pred cccCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCC--CHHHHHHHhhhccCChhhhhhhhcCc-------
Q psy897 9 DFYKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGV--SPQERIEKMLDNEGPIFKDFANLVRL------- 79 (125)
Q Consensus 9 ~~~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~l------- 79 (125)
..+++|+++||||+|+||+++++.|++. |.+|++.++..... ...+.+.........+..|+.+...+
T Consensus 8 ~~l~~k~~lVTGas~gIG~~ia~~L~~~---Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~ 84 (306)
T PRK07792 8 TDLSGKVAVVTGAAAGLGRAEALGLARL---GATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATA 84 (306)
T ss_pred cCCCCCEEEEECCCChHHHHHHHHHHHC---CCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHH
Confidence 3467899999999999999999999998 78999887753311 11111211100000111122221111
Q ss_pred ---cCCCeEEEeccccCc-------chhHHHHhHhhHHHHHHHHHHHh
Q psy897 80 ---KTQRIRFIFLATLRF-------DEELKIAIRTNICATQTVVKLAK 117 (125)
Q Consensus 80 ---~~~~~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~~ 117 (125)
...|+|||+||.... .+++...+++|+.|++++++++.
T Consensus 85 ~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~ 132 (306)
T PRK07792 85 VGLGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAA 132 (306)
T ss_pred HHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHH
Confidence 023899999998632 24677888999999999998764
No 117
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=99.24 E-value=3.5e-11 Score=81.50 Aligned_cols=104 Identities=13% Similarity=0.140 Sum_probs=65.7
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhh---hccCChhhhhhhhcC---------
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKML---DNEGPIFKDFANLVR--------- 78 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~--------- 78 (125)
+++++++||||+|+||+++++.|++. |++|+++.|..... .......+. .....+..|+.+...
T Consensus 3 ~~~~~vlItG~sg~iG~~l~~~l~~~---G~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 78 (248)
T PRK05557 3 LEGKVALVTGASRGIGRAIAERLAAQ---GANVVINYASSEAG-AEALVAEIGALGGKALAVQGDVSDAESVERAVDEAK 78 (248)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC---CCEEEEEeCCchhH-HHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHH
Confidence 35789999999999999999999998 79998887754421 111111111 000011112222111
Q ss_pred --ccCCCeEEEeccccCcc-------hhHHHHhHhhHHHHHHHHHHHhh
Q psy897 79 --LKTQRIRFIFLATLRFD-------EELKIAIRTNICATQTVVKLAKQ 118 (125)
Q Consensus 79 --l~~~~~Vih~a~~~~~~-------~~~~~~~~~Nv~g~~~l~~~~~~ 118 (125)
+...|+|||++|..... +.+...+++|+.++.++++++..
T Consensus 79 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 127 (248)
T PRK05557 79 AEFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVAR 127 (248)
T ss_pred HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 01237999999975321 34567788999999999987764
No 118
>PRK06139 short chain dehydrogenase; Provisional
Probab=99.24 E-value=1.9e-11 Score=87.07 Aligned_cols=103 Identities=15% Similarity=0.154 Sum_probs=66.4
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCC-HHHHHHHhhhccCChhhhhhhhcCcc---------
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVS-PQERIEKMLDNEGPIFKDFANLVRLK--------- 80 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~l~--------- 80 (125)
+++|+++||||+|+||+++++.|++. |++|++++|+..... ..+.+.........+..|+.+...++
T Consensus 5 l~~k~vlITGAs~GIG~aia~~la~~---G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~ 81 (330)
T PRK06139 5 LHGAVVVITGASSGIGQATAEAFARR---GARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASF 81 (330)
T ss_pred CCCCEEEEcCCCCHHHHHHHHHHHHC---CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHh
Confidence 56789999999999999999999998 799999998654321 11112111110000111222211111
Q ss_pred --CCCeEEEeccccCc-------chhHHHHhHhhHHHHHHHHHHH
Q psy897 81 --TQRIRFIFLATLRF-------DEELKIAIRTNICATQTVVKLA 116 (125)
Q Consensus 81 --~~~~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~ 116 (125)
..|++||+||.... .+.++..+++|+.|+.++.+++
T Consensus 82 ~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~ 126 (330)
T PRK06139 82 GGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAA 126 (330)
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHH
Confidence 23899999997522 1456778899999999987765
No 119
>PRK12829 short chain dehydrogenase; Provisional
Probab=99.24 E-value=8.8e-11 Score=80.53 Aligned_cols=103 Identities=10% Similarity=0.084 Sum_probs=67.8
Q ss_pred cccCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhcc--CChhhhhhhhcCc-------
Q psy897 9 DFYKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDNE--GPIFKDFANLVRL------- 79 (125)
Q Consensus 9 ~~~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~l------- 79 (125)
..+++++++||||+|+||+++++.|+++ |++|++++|++... ..+.+..... .....|+.++..+
T Consensus 7 ~~~~~~~vlItGa~g~iG~~~a~~L~~~---g~~V~~~~r~~~~~---~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 80 (264)
T PRK12829 7 KPLDGLRVLVTGGASGIGRAIAEAFAEA---GARVHVCDVSEAAL---AATAARLPGAKVTATVADVADPAQVERVFDTA 80 (264)
T ss_pred hccCCCEEEEeCCCCcHHHHHHHHHHHC---CCEEEEEeCCHHHH---HHHHHHHhcCceEEEEccCCCHHHHHHHHHHH
Confidence 3467899999999999999999999998 79999999865421 1121111100 0011122211111
Q ss_pred ----cCCCeEEEecccc-Cc-------chhHHHHhHhhHHHHHHHHHHHh
Q psy897 80 ----KTQRIRFIFLATL-RF-------DEELKIAIRTNICATQTVVKLAK 117 (125)
Q Consensus 80 ----~~~~~Vih~a~~~-~~-------~~~~~~~~~~Nv~g~~~l~~~~~ 117 (125)
...|+|||++|.. .. .+.+...+++|+.++.++++++.
T Consensus 81 ~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 130 (264)
T PRK12829 81 VERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAV 130 (264)
T ss_pred HHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 0238999999986 21 14567788999999999998763
No 120
>PRK07576 short chain dehydrogenase; Provisional
Probab=99.24 E-value=3.4e-11 Score=83.08 Aligned_cols=106 Identities=12% Similarity=0.097 Sum_probs=67.0
Q ss_pred ccCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCC-HHHHHHHhhhccCChhhhhhhhcCcc--------
Q psy897 10 FYKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVS-PQERIEKMLDNEGPIFKDFANLVRLK-------- 80 (125)
Q Consensus 10 ~~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~l~-------- 80 (125)
.+++++++||||+|+||+++++.|++. |++|++++|+..... ....+.........+..|+.+...+.
T Consensus 6 ~~~~k~ilItGasggIG~~la~~l~~~---G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~ 82 (264)
T PRK07576 6 DFAGKNVVVVGGTSGINLGIAQAFARA---GANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIAD 82 (264)
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHC---CCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHH
Confidence 357899999999999999999999988 799999998654211 11111111100000011222111110
Q ss_pred ---CCCeEEEeccccCc-------chhHHHHhHhhHHHHHHHHHHHhh
Q psy897 81 ---TQRIRFIFLATLRF-------DEELKIAIRTNICATQTVVKLAKQ 118 (125)
Q Consensus 81 ---~~~~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~~~ 118 (125)
..|+|||+||.... .+++...+++|+.|+.++++++..
T Consensus 83 ~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~ 130 (264)
T PRK07576 83 EFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYP 130 (264)
T ss_pred HcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 13899999985321 245667788999999999987653
No 121
>PRK05872 short chain dehydrogenase; Provisional
Probab=99.24 E-value=4.6e-11 Score=83.79 Aligned_cols=102 Identities=13% Similarity=0.133 Sum_probs=67.1
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhccCCh--hhhhhhhcCc---------
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDNEGPI--FKDFANLVRL--------- 79 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~l--------- 79 (125)
+++++++||||+|+||.++++.|.+. |++|++++|+.... .....++....... ..|+.+...+
T Consensus 7 l~gk~vlItGas~gIG~~ia~~l~~~---G~~V~~~~r~~~~l--~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 81 (296)
T PRK05872 7 LAGKVVVVTGAARGIGAELARRLHAR---GAKLALVDLEEAEL--AALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVE 81 (296)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC---CCEEEEEeCCHHHH--HHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 56899999999999999999999998 79999999865421 11111111000000 0222221111
Q ss_pred --cCCCeEEEeccccCc-------chhHHHHhHhhHHHHHHHHHHHh
Q psy897 80 --KTQRIRFIFLATLRF-------DEELKIAIRTNICATQTVVKLAK 117 (125)
Q Consensus 80 --~~~~~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~~ 117 (125)
...|+|||+||.... .++++..+++|+.|+.++++++.
T Consensus 82 ~~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~ 128 (296)
T PRK05872 82 RFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATL 128 (296)
T ss_pred HcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 123899999998522 14577788999999999988764
No 122
>PRK07791 short chain dehydrogenase; Provisional
Probab=99.24 E-value=2.6e-11 Score=84.69 Aligned_cols=105 Identities=14% Similarity=0.123 Sum_probs=66.9
Q ss_pred ccCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCC------C-CCHHHHHHHhhh---ccCChhhhhhhhcCc
Q psy897 10 FYKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERK------G-VSPQERIEKMLD---NEGPIFKDFANLVRL 79 (125)
Q Consensus 10 ~~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~------~-~~~~~~~~~~~~---~~~~~~~~l~~~~~l 79 (125)
.+++|+++||||+++||.++++.|++. |.+|+++++... . ........++.. ....+..|+.+...+
T Consensus 3 ~l~~k~~lITGas~GIG~aia~~la~~---G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v 79 (286)
T PRK07791 3 LLDGRVVIVTGAGGGIGRAHALAFAAE---GARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGA 79 (286)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHC---CCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHH
Confidence 457899999999999999999999998 789998877541 0 111111111111 000111122221111
Q ss_pred -----------cCCCeEEEeccccCc-------chhHHHHhHhhHHHHHHHHHHHh
Q psy897 80 -----------KTQRIRFIFLATLRF-------DEELKIAIRTNICATQTVVKLAK 117 (125)
Q Consensus 80 -----------~~~~~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~~ 117 (125)
...|++||+||.... .++++..+++|+.|++.+++++.
T Consensus 80 ~~~~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~ 135 (286)
T PRK07791 80 ANLVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAA 135 (286)
T ss_pred HHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHH
Confidence 123799999998521 25678889999999999988654
No 123
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=99.23 E-value=4.2e-11 Score=81.24 Aligned_cols=102 Identities=11% Similarity=0.075 Sum_probs=64.5
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhccCChhhhhhhhcCc-----------
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDNEGPIFKDFANLVRL----------- 79 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l----------- 79 (125)
+++++++||||+|+||+++++.|+++ ++.|.+.+|+.... ................|+.+...+
T Consensus 4 ~~~~~vlItGa~g~iG~~la~~l~~~---g~~v~~~~~~~~~~--~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (245)
T PRK12936 4 LSGRKALVTGASGGIGEEIARLLHAQ---GAIVGLHGTRVEKL--EALAAELGERVKIFPANLSDRDEVKALGQKAEADL 78 (245)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC---CCEEEEEcCCHHHH--HHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 35789999999999999999999998 78888777654321 111111100000111122211111
Q ss_pred cCCCeEEEeccccCc-------chhHHHHhHhhHHHHHHHHHHHh
Q psy897 80 KTQRIRFIFLATLRF-------DEELKIAIRTNICATQTVVKLAK 117 (125)
Q Consensus 80 ~~~~~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~~ 117 (125)
...|+|||+||.... .+++...+++|+.++.++++++.
T Consensus 79 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 123 (245)
T PRK12936 79 EGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELT 123 (245)
T ss_pred CCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHH
Confidence 123899999997531 24567788999999999988764
No 124
>PRK09072 short chain dehydrogenase; Provisional
Probab=99.23 E-value=2.6e-11 Score=83.39 Aligned_cols=102 Identities=15% Similarity=0.214 Sum_probs=66.1
Q ss_pred CCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHh--hhccCChhhhhhhhcC----------c
Q psy897 12 KDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKM--LDNEGPIFKDFANLVR----------L 79 (125)
Q Consensus 12 ~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~----------l 79 (125)
++++++||||+|+||.++++.|+++ |++|++++|++... .....++ ......+..|+.+... +
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~---G~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~ 78 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAA---GARLLLVGRNAEKL--EALAARLPYPGRHRWVVADLTSEAGREAVLARAREM 78 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC---CCEEEEEECCHHHH--HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhc
Confidence 5789999999999999999999998 79999999864421 1111111 0000001112222111 1
Q ss_pred cCCCeEEEeccccCc-------chhHHHHhHhhHHHHHHHHHHHhh
Q psy897 80 KTQRIRFIFLATLRF-------DEELKIAIRTNICATQTVVKLAKQ 118 (125)
Q Consensus 80 ~~~~~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~~~ 118 (125)
...|+|||+||.... .+.+...+++|+.|+.++++.+..
T Consensus 79 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~ 124 (263)
T PRK09072 79 GGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLP 124 (263)
T ss_pred CCCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 123899999998532 134667888999999999987643
No 125
>PRK05693 short chain dehydrogenase; Provisional
Probab=99.23 E-value=4.5e-11 Score=82.70 Aligned_cols=97 Identities=16% Similarity=0.146 Sum_probs=63.6
Q ss_pred CceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhccCChhhhhhhhcCc-----------cC
Q psy897 13 DGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDNEGPIFKDFANLVRL-----------KT 81 (125)
Q Consensus 13 ~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l-----------~~ 81 (125)
+|+++||||+|+||+++++.|++. |++|++++|+.... ...... . ...+..|+.+...+ ..
T Consensus 1 mk~vlItGasggiG~~la~~l~~~---G~~V~~~~r~~~~~---~~~~~~-~-~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 72 (274)
T PRK05693 1 MPVVLITGCSSGIGRALADAFKAA---GYEVWATARKAEDV---EALAAA-G-FTAVQLDVNDGAALARLAEELEAEHGG 72 (274)
T ss_pred CCEEEEecCCChHHHHHHHHHHHC---CCEEEEEeCCHHHH---HHHHHC-C-CeEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence 378999999999999999999988 79999999865321 111110 0 00111122211110 12
Q ss_pred CCeEEEeccccCc-------chhHHHHhHhhHHHHHHHHHHHh
Q psy897 82 QRIRFIFLATLRF-------DEELKIAIRTNICATQTVVKLAK 117 (125)
Q Consensus 82 ~~~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~~ 117 (125)
.|+|||+||.... .+++...+++|+.|+.++++++.
T Consensus 73 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~ 115 (274)
T PRK05693 73 LDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALF 115 (274)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 3899999997521 14567788999999999988763
No 126
>PRK06701 short chain dehydrogenase; Provisional
Probab=99.23 E-value=4.8e-11 Score=83.54 Aligned_cols=104 Identities=19% Similarity=0.118 Sum_probs=68.2
Q ss_pred ccCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhc----cCChhhhhhhhcCcc-----
Q psy897 10 FYKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDN----EGPIFKDFANLVRLK----- 80 (125)
Q Consensus 10 ~~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~----~~~~~~~l~~~~~l~----- 80 (125)
.+++|+++||||+|+||+++++.|++. |++|++++|..... .......... ...+..|+.+...++
T Consensus 43 ~~~~k~iLItGasggIG~~la~~l~~~---G~~V~l~~r~~~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 117 (290)
T PRK06701 43 KLKGKVALITGGDSGIGRAVAVLFAKE---GADIAIVYLDEHED--ANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEE 117 (290)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHC---CCEEEEEeCCcchH--HHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHH
Confidence 456799999999999999999999998 79999988865321 1111111110 001112222211110
Q ss_pred ------CCCeEEEeccccCc--------chhHHHHhHhhHHHHHHHHHHHhh
Q psy897 81 ------TQRIRFIFLATLRF--------DEELKIAIRTNICATQTVVKLAKQ 118 (125)
Q Consensus 81 ------~~~~Vih~a~~~~~--------~~~~~~~~~~Nv~g~~~l~~~~~~ 118 (125)
..|+|||+||.... .+.+...+++|+.++.++++++.+
T Consensus 118 i~~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~ 169 (290)
T PRK06701 118 TVRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALP 169 (290)
T ss_pred HHHHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 23799999997421 135677889999999999998765
No 127
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=99.23 E-value=4.3e-11 Score=81.90 Aligned_cols=104 Identities=13% Similarity=0.110 Sum_probs=66.7
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCC-HHHHHHHhhhccCChhhhhhhhcCcc---------
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVS-PQERIEKMLDNEGPIFKDFANLVRLK--------- 80 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~l~--------- 80 (125)
+++|+++||||+|+||+++++.|++. |++|++++|++.... ....+.........+..|+.+...+.
T Consensus 9 ~~~k~ilItGas~~IG~~la~~l~~~---G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 85 (256)
T PRK06124 9 LAGQVALVTGSARGLGFEIARALAGA---GAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAE 85 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHc---CCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence 67899999999999999999999988 799999998653211 11111111000011111222211110
Q ss_pred --CCCeEEEeccccCc-------chhHHHHhHhhHHHHHHHHHHHh
Q psy897 81 --TQRIRFIFLATLRF-------DEELKIAIRTNICATQTVVKLAK 117 (125)
Q Consensus 81 --~~~~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~~ 117 (125)
..|+|||++|.... .++++..+++|+.++..+.+.+.
T Consensus 86 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 131 (256)
T PRK06124 86 HGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAA 131 (256)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 22799999997522 14567788999999999997664
No 128
>PRK07060 short chain dehydrogenase; Provisional
Probab=99.23 E-value=5.1e-11 Score=80.85 Aligned_cols=101 Identities=12% Similarity=0.160 Sum_probs=67.2
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhccCChhhhhhhhcCcc-------CCC
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDNEGPIFKDFANLVRLK-------TQR 83 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~-------~~~ 83 (125)
+++++++||||+|+||+++++.|++. +++|++++|+.... +.+...... ..+..|+.+...+. ..|
T Consensus 7 ~~~~~~lItGa~g~iG~~~a~~l~~~---g~~V~~~~r~~~~~---~~~~~~~~~-~~~~~D~~~~~~v~~~~~~~~~~d 79 (245)
T PRK07060 7 FSGKSVLVTGASSGIGRACAVALAQR---GARVVAAARNAAAL---DRLAGETGC-EPLRLDVGDDAAIRAALAAAGAFD 79 (245)
T ss_pred cCCCEEEEeCCcchHHHHHHHHHHHC---CCEEEEEeCCHHHH---HHHHHHhCC-eEEEecCCCHHHHHHHHHHhCCCC
Confidence 46789999999999999999999998 78999999865321 111111110 11112222211111 238
Q ss_pred eEEEeccccCc-------chhHHHHhHhhHHHHHHHHHHHhh
Q psy897 84 IRFIFLATLRF-------DEELKIAIRTNICATQTVVKLAKQ 118 (125)
Q Consensus 84 ~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~~~ 118 (125)
+|||+||.... .++++..+++|+.++.++++++.+
T Consensus 80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 121 (245)
T PRK07060 80 GLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVAR 121 (245)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 99999998532 145667778999999999997764
No 129
>PRK08267 short chain dehydrogenase; Provisional
Probab=99.23 E-value=2.8e-11 Score=83.08 Aligned_cols=99 Identities=16% Similarity=0.039 Sum_probs=64.5
Q ss_pred CceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhh--ccCChhhhhhhhcC------------
Q psy897 13 DGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLD--NEGPIFKDFANLVR------------ 78 (125)
Q Consensus 13 ~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~------------ 78 (125)
+|+++||||+|+||+++++.|++. |++|++++|+.... ..+..... ....+..|+.+...
T Consensus 1 mk~vlItGasg~iG~~la~~l~~~---G~~V~~~~r~~~~~---~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 74 (260)
T PRK08267 1 MKSIFITGAASGIGRATALLFAAE---GWRVGAYDINEAGL---AALAAELGAGNAWTGALDVTDRAAWDAALADFAAAT 74 (260)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHC---CCeEEEEeCCHHHH---HHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 378999999999999999999998 79999999865421 11111100 00001112211110
Q ss_pred ccCCCeEEEeccccCc-------chhHHHHhHhhHHHHHHHHHHHh
Q psy897 79 LKTQRIRFIFLATLRF-------DEELKIAIRTNICATQTVVKLAK 117 (125)
Q Consensus 79 l~~~~~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~~ 117 (125)
....|+|||+||.... .++++..+++|+.++..+++++.
T Consensus 75 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 120 (260)
T PRK08267 75 GGRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAAL 120 (260)
T ss_pred CCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 0022899999998632 14567788999999999988774
No 130
>PRK09134 short chain dehydrogenase; Provisional
Probab=99.23 E-value=5.1e-11 Score=81.72 Aligned_cols=104 Identities=10% Similarity=0.112 Sum_probs=64.9
Q ss_pred CCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCC--CHHHHHHHhhhccCChhhhhhhhcCcc---------
Q psy897 12 KDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGV--SPQERIEKMLDNEGPIFKDFANLVRLK--------- 80 (125)
Q Consensus 12 ~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~l~--------- 80 (125)
.+|+++||||+|+||+++++.|++. +++++++++..... .....+.........+..|+.+...+.
T Consensus 8 ~~k~vlItGas~giG~~la~~l~~~---g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~ 84 (258)
T PRK09134 8 APRAALVTGAARRIGRAIALDLAAH---GFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAA 84 (258)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC---CCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 5789999999999999999999998 78888876643211 011111110010001112222211110
Q ss_pred --CCCeEEEeccccCc-------chhHHHHhHhhHHHHHHHHHHHhh
Q psy897 81 --TQRIRFIFLATLRF-------DEELKIAIRTNICATQTVVKLAKQ 118 (125)
Q Consensus 81 --~~~~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~~~ 118 (125)
..|+|||+||.... .+.+...+++|+.|+.++++++..
T Consensus 85 ~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 131 (258)
T PRK09134 85 LGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFAR 131 (258)
T ss_pred cCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 23899999997422 145677889999999999987654
No 131
>PRK12747 short chain dehydrogenase; Provisional
Probab=99.23 E-value=2.4e-10 Score=78.10 Aligned_cols=105 Identities=12% Similarity=0.064 Sum_probs=63.6
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEec-CCCCC-CHHHHHHHhhhc-------------cCChhhhhhh
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVR-ERKGV-SPQERIEKMLDN-------------EGPIFKDFAN 75 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r-~~~~~-~~~~~~~~~~~~-------------~~~~~~~l~~ 75 (125)
+++|+++||||+|+||++++++|++. |++|++..+ ..... .....+...... ....++++.+
T Consensus 2 ~~~k~~lItGas~gIG~~ia~~l~~~---G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 78 (252)
T PRK12747 2 LKGKVALVTGASRGIGRAIAKRLAND---GALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDN 78 (252)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHC---CCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHH
Confidence 45789999999999999999999998 788888653 22211 011111110000 0001112211
Q ss_pred h----cCccCCCeEEEeccccCc-------chhHHHHhHhhHHHHHHHHHHHhh
Q psy897 76 L----VRLKTQRIRFIFLATLRF-------DEELKIAIRTNICATQTVVKLAKQ 118 (125)
Q Consensus 76 ~----~~l~~~~~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~~~ 118 (125)
. .+....|+|||+||.... .+.++..+++|+.+++.+++++..
T Consensus 79 ~~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~ 132 (252)
T PRK12747 79 ELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALS 132 (252)
T ss_pred HhhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 1 010123899999997421 134677889999999999986643
No 132
>PRK07825 short chain dehydrogenase; Provisional
Probab=99.22 E-value=7.8e-11 Score=81.44 Aligned_cols=100 Identities=14% Similarity=0.026 Sum_probs=64.0
Q ss_pred CCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhccCChhhhhhhhcCc-----------c
Q psy897 12 KDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDNEGPIFKDFANLVRL-----------K 80 (125)
Q Consensus 12 ~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l-----------~ 80 (125)
++++++||||+|+||+++++.|+++ |++|++.+|++... ............+..|+.+...+ .
T Consensus 4 ~~~~ilVtGasggiG~~la~~l~~~---G~~v~~~~r~~~~~---~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 77 (273)
T PRK07825 4 RGKVVAITGGARGIGLATARALAAL---GARVAIGDLDEALA---KETAAELGLVVGGPLDVTDPASFAAFLDAVEADLG 77 (273)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC---CCEEEEEECCHHHH---HHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcC
Confidence 4789999999999999999999998 79999988865421 11111001001111122211110 0
Q ss_pred CCCeEEEeccccCc-------chhHHHHhHhhHHHHHHHHHHHh
Q psy897 81 TQRIRFIFLATLRF-------DEELKIAIRTNICATQTVVKLAK 117 (125)
Q Consensus 81 ~~~~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~~ 117 (125)
..|++||+||.... .+.+...+++|+.|+..+.+.+.
T Consensus 78 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~ 121 (273)
T PRK07825 78 PIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAA 121 (273)
T ss_pred CCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 23799999998532 13466788899999999877653
No 133
>PRK06182 short chain dehydrogenase; Validated
Probab=99.22 E-value=6e-11 Score=82.05 Aligned_cols=96 Identities=16% Similarity=0.191 Sum_probs=62.0
Q ss_pred CCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhccCChhhhhhhhcCcc-----------
Q psy897 12 KDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDNEGPIFKDFANLVRLK----------- 80 (125)
Q Consensus 12 ~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~----------- 80 (125)
++|+++||||+|+||++++++|+++ |++|++++|+.... +.+..... ..+..|+.+...+.
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~---G~~V~~~~r~~~~l---~~~~~~~~--~~~~~Dv~~~~~~~~~~~~~~~~~~ 73 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQ---GYTVYGAARRVDKM---EDLASLGV--HPLSLDVTDEASIKAAVDTIIAEEG 73 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC---CCEEEEEeCCHHHH---HHHHhCCC--eEEEeeCCCHHHHHHHHHHHHHhcC
Confidence 4689999999999999999999998 79999999865421 11111000 11111222211110
Q ss_pred CCCeEEEeccccCc-------chhHHHHhHhhHHHHHHHHHH
Q psy897 81 TQRIRFIFLATLRF-------DEELKIAIRTNICATQTVVKL 115 (125)
Q Consensus 81 ~~~~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~ 115 (125)
..|+|||+||.... .++++..+++|+.++..+++.
T Consensus 74 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~ 115 (273)
T PRK06182 74 RIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQL 115 (273)
T ss_pred CCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHH
Confidence 23899999998632 145677889999996665553
No 134
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=99.22 E-value=5e-11 Score=80.67 Aligned_cols=103 Identities=15% Similarity=0.132 Sum_probs=65.7
Q ss_pred CCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCH-HHHHHHhhhccCChhhhhhhhcCc-----------
Q psy897 12 KDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSP-QERIEKMLDNEGPIFKDFANLVRL----------- 79 (125)
Q Consensus 12 ~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~l----------- 79 (125)
.+++++||||+|+||+++++.|+++ |++|++++|++..... ...+.........+..|+.+...+
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~---g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAAD---GAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAF 80 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC---CCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence 4679999999999999999999998 7899999987653211 111111100000011222221111
Q ss_pred cCCCeEEEeccccCc-------chhHHHHhHhhHHHHHHHHHHHh
Q psy897 80 KTQRIRFIFLATLRF-------DEELKIAIRTNICATQTVVKLAK 117 (125)
Q Consensus 80 ~~~~~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~~ 117 (125)
...|+|||++|.... .+.+...+++|+.++.++++++.
T Consensus 81 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 125 (246)
T PRK05653 81 GALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAAL 125 (246)
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence 123899999988532 13456778899999999998874
No 135
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.22 E-value=7.6e-11 Score=80.76 Aligned_cols=99 Identities=16% Similarity=0.205 Sum_probs=62.3
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhccCChhhhhhhhcCc-----------
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDNEGPIFKDFANLVRL----------- 79 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l----------- 79 (125)
+++|+++||||+|+||+++++.|++. |++|++..+.... ..+.+... . ...+..|+.+...+
T Consensus 5 l~~k~~lItGas~gIG~~~a~~l~~~---G~~v~~~~~~~~~--~~~~l~~~-~-~~~~~~Dl~~~~~~~~~~~~~~~~~ 77 (255)
T PRK06463 5 FKGKVALITGGTRGIGRAIAEAFLRE---GAKVAVLYNSAEN--EAKELREK-G-VFTIKCDVGNRDQVKKSKEVVEKEF 77 (255)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHC---CCEEEEEeCCcHH--HHHHHHhC-C-CeEEEecCCCHHHHHHHHHHHHHHc
Confidence 46799999999999999999999998 7888887654321 11122110 0 00111122211111
Q ss_pred cCCCeEEEeccccCc-------chhHHHHhHhhHHHHHHHHHHH
Q psy897 80 KTQRIRFIFLATLRF-------DEELKIAIRTNICATQTVVKLA 116 (125)
Q Consensus 80 ~~~~~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~ 116 (125)
...|+|||+||.... .++++..+++|+.++..+.+.+
T Consensus 78 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~ 121 (255)
T PRK06463 78 GRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEF 121 (255)
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHH
Confidence 023899999998521 2457778899999987775543
No 136
>PRK12827 short chain dehydrogenase; Provisional
Probab=99.22 E-value=8.6e-11 Score=79.80 Aligned_cols=104 Identities=14% Similarity=0.086 Sum_probs=66.5
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCC-HHHHHHHhhhc----cCChhhhhhhhcCc------
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVS-PQERIEKMLDN----EGPIFKDFANLVRL------ 79 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~-~~~~~~~~~~~----~~~~~~~l~~~~~l------ 79 (125)
+++|+++||||+|+||+++++.|+++ +++|++++|...... ....+.+.... ...+..|+.+...+
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~~~---g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 80 (249)
T PRK12827 4 LDSRRVLITGGSGGLGRAIAVRLAAD---GADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDA 80 (249)
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHC---CCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH
Confidence 45789999999999999999999998 799998876433211 11111111110 00111222221111
Q ss_pred -----cCCCeEEEeccccCc-------chhHHHHhHhhHHHHHHHHHHHh
Q psy897 80 -----KTQRIRFIFLATLRF-------DEELKIAIRTNICATQTVVKLAK 117 (125)
Q Consensus 80 -----~~~~~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~~ 117 (125)
...|+|||++|.... .+++...+++|+.++.++++++.
T Consensus 81 ~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 130 (249)
T PRK12827 81 GVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAAL 130 (249)
T ss_pred HHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHH
Confidence 023799999998531 13566778999999999999886
No 137
>PRK12742 oxidoreductase; Provisional
Probab=99.22 E-value=9.8e-11 Score=79.17 Aligned_cols=101 Identities=14% Similarity=0.184 Sum_probs=63.4
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhccCChhhhhhhhcCc-------cCCC
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDNEGPIFKDFANLVRL-------KTQR 83 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l-------~~~~ 83 (125)
+++|+++||||+|+||+++++.|+++ |++|++..+.... ..+.+...... ..+..|+.+...+ ...|
T Consensus 4 ~~~k~vlItGasggIG~~~a~~l~~~---G~~v~~~~~~~~~--~~~~l~~~~~~-~~~~~D~~~~~~~~~~~~~~~~id 77 (237)
T PRK12742 4 FTGKKVLVLGGSRGIGAAIVRRFVTD---GANVRFTYAGSKD--AAERLAQETGA-TAVQTDSADRDAVIDVVRKSGALD 77 (237)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC---CCEEEEecCCCHH--HHHHHHHHhCC-eEEecCCCCHHHHHHHHHHhCCCc
Confidence 46789999999999999999999998 7888877653221 11111111010 1111122211111 0238
Q ss_pred eEEEeccccCc-------chhHHHHhHhhHHHHHHHHHHHh
Q psy897 84 IRFIFLATLRF-------DEELKIAIRTNICATQTVVKLAK 117 (125)
Q Consensus 84 ~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~~ 117 (125)
+|||+||.... .++++..+++|+.++..++..+.
T Consensus 78 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 118 (237)
T PRK12742 78 ILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAA 118 (237)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHH
Confidence 99999997521 14577888999999999976544
No 138
>PRK06523 short chain dehydrogenase; Provisional
Probab=99.22 E-value=1.9e-10 Score=78.87 Aligned_cols=100 Identities=19% Similarity=0.192 Sum_probs=63.8
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHH----Hhhhc--cCChhhhhhhhcCccCCCe
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIE----KMLDN--EGPIFKDFANLVRLKTQRI 84 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~----~~~~~--~~~~~~~l~~~~~l~~~~~ 84 (125)
+++|+++||||+|+||++++++|+++ |++|++++|+...... ..+. ++.+. .....+.+.... ...|+
T Consensus 7 ~~~k~vlItGas~gIG~~ia~~l~~~---G~~v~~~~r~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~--~~id~ 80 (260)
T PRK06523 7 LAGKRALVTGGTKGIGAATVARLLEA---GARVVTTARSRPDDLP-EGVEFVAADLTTAEGCAAVARAVLERL--GGVDI 80 (260)
T ss_pred CCCCEEEEECCCCchhHHHHHHHHHC---CCEEEEEeCChhhhcC-CceeEEecCCCCHHHHHHHHHHHHHHc--CCCCE
Confidence 57899999999999999999999998 7999999986542110 0000 00000 000111111111 12389
Q ss_pred EEEeccccC---------cchhHHHHhHhhHHHHHHHHHHH
Q psy897 85 RFIFLATLR---------FDEELKIAIRTNICATQTVVKLA 116 (125)
Q Consensus 85 Vih~a~~~~---------~~~~~~~~~~~Nv~g~~~l~~~~ 116 (125)
|||+||... ..+++...+++|+.++.++++++
T Consensus 81 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~ 121 (260)
T PRK06523 81 LVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRAL 121 (260)
T ss_pred EEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHH
Confidence 999999631 12457778899999998887654
No 139
>PRK05854 short chain dehydrogenase; Provisional
Probab=99.22 E-value=4.9e-11 Score=84.33 Aligned_cols=104 Identities=13% Similarity=0.079 Sum_probs=66.8
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCC-HHHHHHHhhhc--cCChhhhhhhhcCcc-------
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVS-PQERIEKMLDN--EGPIFKDFANLVRLK------- 80 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~-~~~~~~~~~~~--~~~~~~~l~~~~~l~------- 80 (125)
+++|+++||||+|+||.+++++|++. |++|++.+|+..... ..+.+...... ...+..|+.+...+.
T Consensus 12 l~gk~~lITGas~GIG~~~a~~La~~---G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~ 88 (313)
T PRK05854 12 LSGKRAVVTGASDGLGLGLARRLAAA---GAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLR 88 (313)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHC---CCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHH
Confidence 57899999999999999999999998 799999998654211 11112111100 000111222211110
Q ss_pred ----CCCeEEEeccccCc------chhHHHHhHhhHHHHHHHHHHHh
Q psy897 81 ----TQRIRFIFLATLRF------DEELKIAIRTNICATQTVVKLAK 117 (125)
Q Consensus 81 ----~~~~Vih~a~~~~~------~~~~~~~~~~Nv~g~~~l~~~~~ 117 (125)
..|++||+||.... .+.++..+++|+.|.+.+.+.+.
T Consensus 89 ~~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~ll 135 (313)
T PRK05854 89 AEGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLL 135 (313)
T ss_pred HhCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHH
Confidence 23799999997521 14577788999999888877654
No 140
>PRK07985 oxidoreductase; Provisional
Probab=99.21 E-value=1.3e-10 Score=81.50 Aligned_cols=104 Identities=14% Similarity=0.131 Sum_probs=67.7
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhc----cCChhhhhhhhcCcc------
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDN----EGPIFKDFANLVRLK------ 80 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~----~~~~~~~l~~~~~l~------ 80 (125)
+++|+++||||+|+||+++++.|++. |++|++.+|+..... .+.+.+.... ...+..|+.+...+.
T Consensus 47 ~~~k~vlITGas~gIG~aia~~L~~~---G~~Vi~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 122 (294)
T PRK07985 47 LKDRKALVTGGDSGIGRAAAIAYARE---GADVAISYLPVEEED-AQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEA 122 (294)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHC---CCEEEEecCCcchhh-HHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHH
Confidence 56789999999999999999999998 799988776543211 1122221110 001112332221110
Q ss_pred -----CCCeEEEeccccC----c----chhHHHHhHhhHHHHHHHHHHHhh
Q psy897 81 -----TQRIRFIFLATLR----F----DEELKIAIRTNICATQTVVKLAKQ 118 (125)
Q Consensus 81 -----~~~~Vih~a~~~~----~----~~~~~~~~~~Nv~g~~~l~~~~~~ 118 (125)
..|++||+||... . .+++...+++|+.|+..+++++..
T Consensus 123 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~ 173 (294)
T PRK07985 123 HKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIP 173 (294)
T ss_pred HHHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 2389999999641 1 146778889999999999998764
No 141
>PRK12320 hypothetical protein; Provisional
Probab=99.21 E-value=3.1e-11 Score=92.75 Aligned_cols=91 Identities=14% Similarity=0.120 Sum_probs=61.4
Q ss_pred ceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhccCChhhhhhhhc---CccCCCeEEEecc
Q psy897 14 GVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDNEGPIFKDFANLV---RLKTQRIRFIFLA 90 (125)
Q Consensus 14 ~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~l~~~~~Vih~a~ 90 (125)
|+|+||||+||||+++++.|+++ +++|++++|.+.... ...+ ..+..|+.+.. .+...|+|||+|+
T Consensus 1 MkILVTGAaGFIGs~La~~Ll~~---G~~Vi~ldr~~~~~~-~~~v-------e~v~~Dl~d~~l~~al~~~D~VIHLAa 69 (699)
T PRK12320 1 MQILVTDATGAVGRSVTRQLIAA---GHTVSGIAQHPHDAL-DPRV-------DYVCASLRNPVLQELAGEADAVIHLAP 69 (699)
T ss_pred CEEEEECCCCHHHHHHHHHHHhC---CCEEEEEeCChhhcc-cCCc-------eEEEccCCCHHHHHHhcCCCEEEEcCc
Confidence 47999999999999999999998 799999998543210 0000 11112222210 1112389999998
Q ss_pred ccCcchhHHHHhHhhHHHHHHHHHHHhhCC
Q psy897 91 TLRFDEELKIAIRTNICATQTVVKLAKQCP 120 (125)
Q Consensus 91 ~~~~~~~~~~~~~~Nv~g~~~l~~~~~~~~ 120 (125)
..... ...+|+.|+.+++++|++.+
T Consensus 70 ~~~~~-----~~~vNv~Gt~nLleAA~~~G 94 (699)
T PRK12320 70 VDTSA-----PGGVGITGLAHVANAAARAG 94 (699)
T ss_pred cCccc-----hhhHHHHHHHHHHHHHHHcC
Confidence 74221 12589999999999998765
No 142
>PRK06483 dihydromonapterin reductase; Provisional
Probab=99.21 E-value=8.8e-11 Score=79.54 Aligned_cols=99 Identities=14% Similarity=0.093 Sum_probs=64.4
Q ss_pred CceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhccCChhhhhhhhcCc-----------cC
Q psy897 13 DGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDNEGPIFKDFANLVRL-----------KT 81 (125)
Q Consensus 13 ~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l-----------~~ 81 (125)
+|+++||||+|+||+++++.|++. |++|++++|++... .+.+..... ..+..|+.+...+ ..
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~---G~~V~~~~r~~~~~--~~~~~~~~~--~~~~~D~~~~~~~~~~~~~~~~~~~~ 74 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQ---GQPVIVSYRTHYPA--IDGLRQAGA--QCIQADFSTNAGIMAFIDELKQHTDG 74 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHC---CCeEEEEeCCchhH--HHHHHHcCC--EEEEcCCCCHHHHHHHHHHHHhhCCC
Confidence 478999999999999999999998 79999999865421 122211100 0111122111110 01
Q ss_pred CCeEEEeccccCc-------chhHHHHhHhhHHHHHHHHHHHhh
Q psy897 82 QRIRFIFLATLRF-------DEELKIAIRTNICATQTVVKLAKQ 118 (125)
Q Consensus 82 ~~~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~~~ 118 (125)
.|++||+||.... .++++..+++|+.+++.+.+.+.+
T Consensus 75 id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~ 118 (236)
T PRK06483 75 LRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALED 118 (236)
T ss_pred ccEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHH
Confidence 3899999997421 245778889999999988776543
No 143
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.21 E-value=5e-11 Score=80.81 Aligned_cols=104 Identities=14% Similarity=0.128 Sum_probs=66.0
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCC-HHHHHHHhhhccCChhhhhhhhcC-----------
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVS-PQERIEKMLDNEGPIFKDFANLVR----------- 78 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~----------- 78 (125)
+++++++||||+|+||++++++|++. |++|++++|++.... ....+............|+.+...
T Consensus 5 ~~~~~vlVtG~sg~iG~~l~~~L~~~---G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (239)
T PRK07666 5 LQGKNALITGAGRGIGRAVAIALAKE---GVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNE 81 (239)
T ss_pred CCCCEEEEEcCCchHHHHHHHHHHHC---CCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 45789999999999999999999998 789999998754211 111111110000001112221111
Q ss_pred ccCCCeEEEeccccCc-------chhHHHHhHhhHHHHHHHHHHHh
Q psy897 79 LKTQRIRFIFLATLRF-------DEELKIAIRTNICATQTVVKLAK 117 (125)
Q Consensus 79 l~~~~~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~~ 117 (125)
+...|+|||++|.... .+++...+++|+.++.++++++.
T Consensus 82 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 127 (239)
T PRK07666 82 LGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVL 127 (239)
T ss_pred cCCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 0123799999997532 14466778999999999988765
No 144
>PRK12828 short chain dehydrogenase; Provisional
Probab=99.21 E-value=6.1e-11 Score=80.00 Aligned_cols=102 Identities=14% Similarity=0.086 Sum_probs=65.7
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhc-cCChhhhhhhhcCc----------
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDN-EGPIFKDFANLVRL---------- 79 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~l---------- 79 (125)
+++|+++||||+|+||+++++.|++. |++|++++|++... .+...++... ......|+.+...+
T Consensus 5 ~~~k~vlItGatg~iG~~la~~l~~~---G~~v~~~~r~~~~~--~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (239)
T PRK12828 5 LQGKVVAITGGFGGLGRATAAWLAAR---GARVALIGRGAAPL--SQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQ 79 (239)
T ss_pred CCCCEEEEECCCCcHhHHHHHHHHHC---CCeEEEEeCChHhH--HHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHH
Confidence 56899999999999999999999998 79999999965421 1111111110 00011122111100
Q ss_pred -cCCCeEEEeccccCc-------chhHHHHhHhhHHHHHHHHHHHh
Q psy897 80 -KTQRIRFIFLATLRF-------DEELKIAIRTNICATQTVVKLAK 117 (125)
Q Consensus 80 -~~~~~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~~ 117 (125)
...|+|||++|.... .+.+...+++|+.++.++++++.
T Consensus 80 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 125 (239)
T PRK12828 80 FGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAAL 125 (239)
T ss_pred hCCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHH
Confidence 023799999997522 13456677899999999988764
No 145
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.21 E-value=9.1e-11 Score=80.72 Aligned_cols=104 Identities=12% Similarity=-0.013 Sum_probs=66.4
Q ss_pred cCCceEEEecCc--cchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhccCChhhhhhhhcCcc--------
Q psy897 11 YKDGVIFLTGGT--GFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDNEGPIFKDFANLVRLK-------- 80 (125)
Q Consensus 11 ~~~~~vlitG~~--G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~-------- 80 (125)
+++|+++||||+ ++||.+++++|++. |++|++.+|+.......+.+.+.......+..|+.+..+++
T Consensus 8 ~~~k~~lItGas~g~GIG~a~a~~la~~---G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 84 (258)
T PRK07533 8 LAGKRGLVVGIANEQSIAWGCARAFRAL---GAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAE 84 (258)
T ss_pred cCCCEEEEECCCCCCcHHHHHHHHHHHc---CCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHH
Confidence 578999999998 59999999999998 79999988864321111122111110001111222211111
Q ss_pred ---CCCeEEEeccccCc-----------chhHHHHhHhhHHHHHHHHHHHh
Q psy897 81 ---TQRIRFIFLATLRF-----------DEELKIAIRTNICATQTVVKLAK 117 (125)
Q Consensus 81 ---~~~~Vih~a~~~~~-----------~~~~~~~~~~Nv~g~~~l~~~~~ 117 (125)
..|++|||||.... .++++..+++|+.|+..+.+.+.
T Consensus 85 ~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~ 135 (258)
T PRK07533 85 EWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAE 135 (258)
T ss_pred HcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHH
Confidence 23899999997421 14577888999999999988654
No 146
>PRK06197 short chain dehydrogenase; Provisional
Probab=99.21 E-value=4.5e-11 Score=84.05 Aligned_cols=101 Identities=13% Similarity=0.090 Sum_probs=62.2
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCC-HHHHHHHhhh--ccCChhhhhhhhcCcc-------
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVS-PQERIEKMLD--NEGPIFKDFANLVRLK------- 80 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~-~~~~~~~~~~--~~~~~~~~l~~~~~l~------- 80 (125)
+++|+++||||+|+||+++++.|++. |++|++++|+..... ..+.+..... ....+..|+.+...++
T Consensus 14 ~~~k~vlItGas~gIG~~~a~~l~~~---G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~ 90 (306)
T PRK06197 14 QSGRVAVVTGANTGLGYETAAALAAK---GAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALR 90 (306)
T ss_pred CCCCEEEEcCCCCcHHHHHHHHHHHC---CCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHH
Confidence 56899999999999999999999998 789999988644211 1111111100 0001112222221110
Q ss_pred ----CCCeEEEeccccCc-----chhHHHHhHhhHHHHHHHHH
Q psy897 81 ----TQRIRFIFLATLRF-----DEELKIAIRTNICATQTVVK 114 (125)
Q Consensus 81 ----~~~~Vih~a~~~~~-----~~~~~~~~~~Nv~g~~~l~~ 114 (125)
..|+|||+||.... .+.++..+++|+.|++.+.+
T Consensus 91 ~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~ 133 (306)
T PRK06197 91 AAYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTG 133 (306)
T ss_pred hhCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHH
Confidence 23899999997522 24567778999999555444
No 147
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=99.20 E-value=1e-10 Score=95.98 Aligned_cols=108 Identities=23% Similarity=0.284 Sum_probs=72.1
Q ss_pred CceEEEecCccchhHHHHHHHHHhCC-CccEEEEEecCCCCCCHHHHHHHhhh-----------ccCChhhhhhhh-cCc
Q psy897 13 DGVIFLTGGTGFMGKVLLDTLLRRFP-SIHSIYILVRERKGVSPQERIEKMLD-----------NEGPIFKDFANL-VRL 79 (125)
Q Consensus 13 ~~~vlitG~~G~iG~~i~~~l~~~~~-~~~~v~~~~r~~~~~~~~~~~~~~~~-----------~~~~~~~~l~~~-~~l 79 (125)
.++|+|||++||+|+++++.|+++.+ ...+|+++.|.........++..... +...+..|+... .++
T Consensus 971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl 1050 (1389)
T TIGR03443 971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGL 1050 (1389)
T ss_pred CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCc
Confidence 57899999999999999999998720 13899999997653332223322110 001111233211 011
Q ss_pred c---------CCCeEEEeccccCcchhHHHHhHhhHHHHHHHHHHHhhCC
Q psy897 80 K---------TQRIRFIFLATLRFDEELKIAIRTNICATQTVVKLAKQCP 120 (125)
Q Consensus 80 ~---------~~~~Vih~a~~~~~~~~~~~~~~~Nv~g~~~l~~~~~~~~ 120 (125)
+ ..|+|||+|+..++..++......|+.|+.+++++|++.+
T Consensus 1051 ~~~~~~~l~~~~d~iiH~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~ 1100 (1389)
T TIGR03443 1051 SDEKWSDLTNEVDVIIHNGALVHWVYPYSKLRDANVIGTINVLNLCAEGK 1100 (1389)
T ss_pred CHHHHHHHHhcCCEEEECCcEecCccCHHHHHHhHHHHHHHHHHHHHhCC
Confidence 1 3479999999988776766666789999999999998653
No 148
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.20 E-value=4.5e-11 Score=81.44 Aligned_cols=105 Identities=17% Similarity=0.174 Sum_probs=63.9
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEE-EecCCCCCC-HHHHHHHhhhccCChhhhhhhhcCcc--------
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYI-LVRERKGVS-PQERIEKMLDNEGPIFKDFANLVRLK-------- 80 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~-~~r~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~l~-------- 80 (125)
+.+++++||||+|+||+++++.|++. |++|++ ..|+..... ..+.+.........+..|+.+...+.
T Consensus 2 ~~~~~vlItGa~g~iG~~~a~~l~~~---g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 78 (250)
T PRK08063 2 FSGKVALVTGSSRGIGKAIALRLAEE---GYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDE 78 (250)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC---CCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 35789999999999999999999998 788776 355433111 11111111010001112222221110
Q ss_pred ---CCCeEEEeccccCc-------chhHHHHhHhhHHHHHHHHHHHhh
Q psy897 81 ---TQRIRFIFLATLRF-------DEELKIAIRTNICATQTVVKLAKQ 118 (125)
Q Consensus 81 ---~~~~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~~~ 118 (125)
..|+|||+||.... .+.+...+++|+.++.++++++.+
T Consensus 79 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 126 (250)
T PRK08063 79 EFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAK 126 (250)
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 23899999997522 134556778999999999987764
No 149
>PRK07677 short chain dehydrogenase; Provisional
Probab=99.20 E-value=5.8e-11 Score=81.22 Aligned_cols=102 Identities=16% Similarity=0.119 Sum_probs=65.2
Q ss_pred CceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCC-HHHHHHHhhhccCChhhhhhhhcCcc-----------
Q psy897 13 DGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVS-PQERIEKMLDNEGPIFKDFANLVRLK----------- 80 (125)
Q Consensus 13 ~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~l~----------- 80 (125)
+|+++||||+|+||+++++.|++. |++|++++|+..... ....+.........+..|+.++..+.
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~---G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 77 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEE---GANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFG 77 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHC---CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 578999999999999999999998 789999998754211 11111111000001111222211110
Q ss_pred CCCeEEEeccccCc-------chhHHHHhHhhHHHHHHHHHHHh
Q psy897 81 TQRIRFIFLATLRF-------DEELKIAIRTNICATQTVVKLAK 117 (125)
Q Consensus 81 ~~~~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~~ 117 (125)
..|+|||++|.... .+.++..+++|+.|++++++++.
T Consensus 78 ~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 121 (252)
T PRK07677 78 RIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVG 121 (252)
T ss_pred CccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHH
Confidence 23799999986321 14577888999999999999874
No 150
>PRK08339 short chain dehydrogenase; Provisional
Probab=99.20 E-value=8.1e-11 Score=81.23 Aligned_cols=104 Identities=15% Similarity=0.169 Sum_probs=66.2
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCC-HHHHHHHhhh-ccCChhhhhhhhcCcc--------
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVS-PQERIEKMLD-NEGPIFKDFANLVRLK-------- 80 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~-~~~~~~~~~~-~~~~~~~~l~~~~~l~-------- 80 (125)
+++|+++||||+|+||++++++|++. |++|++++|+..... ..+.+..... ....+..|+.+...++
T Consensus 6 l~~k~~lItGas~gIG~aia~~l~~~---G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~ 82 (263)
T PRK08339 6 LSGKLAFTTASSKGIGFGVARVLARA---GADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKN 82 (263)
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHHHC---CCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHh
Confidence 57899999999999999999999998 799999998654211 1111111101 0001112222221111
Q ss_pred --CCCeEEEeccccCc-------chhHHHHhHhhHHHHHHHHHHHh
Q psy897 81 --TQRIRFIFLATLRF-------DEELKIAIRTNICATQTVVKLAK 117 (125)
Q Consensus 81 --~~~~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~~ 117 (125)
..|++||+||.... .++|+..+++|+.++..+.+.+-
T Consensus 83 ~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l 128 (263)
T PRK08339 83 IGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALV 128 (263)
T ss_pred hCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 23799999997421 25688888999999888776543
No 151
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=99.20 E-value=6.1e-11 Score=82.16 Aligned_cols=103 Identities=17% Similarity=0.157 Sum_probs=64.2
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCC-HHHHHHHhhhccCChhhhhhhhcC-----------
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVS-PQERIEKMLDNEGPIFKDFANLVR----------- 78 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~----------- 78 (125)
+++|+++||||+|+||+++++.|++. |++|++++|+..... ..+.+.........+..|+.+...
T Consensus 8 ~~~k~vlVtGas~giG~~ia~~l~~~---G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 84 (278)
T PRK08277 8 LKGKVAVITGGGGVLGGAMAKELARA---GAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILED 84 (278)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHC---CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 56899999999999999999999998 799999998643211 111111100000011112221111
Q ss_pred ccCCCeEEEeccccCc----------------------chhHHHHhHhhHHHHHHHHHHH
Q psy897 79 LKTQRIRFIFLATLRF----------------------DEELKIAIRTNICATQTVVKLA 116 (125)
Q Consensus 79 l~~~~~Vih~a~~~~~----------------------~~~~~~~~~~Nv~g~~~l~~~~ 116 (125)
+...|+|||+||.... .+++...+++|+.++..+++++
T Consensus 85 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~ 144 (278)
T PRK08277 85 FGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVF 144 (278)
T ss_pred cCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHH
Confidence 0123899999995311 1457778899999998776654
No 152
>PRK12937 short chain dehydrogenase; Provisional
Probab=99.20 E-value=5.8e-11 Score=80.60 Aligned_cols=105 Identities=14% Similarity=0.123 Sum_probs=65.2
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCC--CHHHHHHHhhhccCChhhhhhhhcCc---------
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGV--SPQERIEKMLDNEGPIFKDFANLVRL--------- 79 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~l--------- 79 (125)
+++++++||||+|+||+++++.|+++ +++++++.++.... ...+.+.........+..|+.+...+
T Consensus 3 ~~~~~vlItG~~~~iG~~la~~l~~~---g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 79 (245)
T PRK12937 3 LSNKVAIVTGASRGIGAAIARRLAAD---GFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAET 79 (245)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC---CCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 45789999999999999999999998 78888776643311 01111111100000011122221111
Q ss_pred --cCCCeEEEeccccCc-------chhHHHHhHhhHHHHHHHHHHHhh
Q psy897 80 --KTQRIRFIFLATLRF-------DEELKIAIRTNICATQTVVKLAKQ 118 (125)
Q Consensus 80 --~~~~~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~~~ 118 (125)
...|+|||+||.... .++++..+++|+.++.++++++.+
T Consensus 80 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 127 (245)
T PRK12937 80 AFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAAR 127 (245)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHH
Confidence 023799999997531 245677888999999999987654
No 153
>PRK12746 short chain dehydrogenase; Provisional
Probab=99.19 E-value=4.3e-11 Score=81.78 Aligned_cols=103 Identities=17% Similarity=0.121 Sum_probs=64.0
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEE-ecCCCCCCHHHHHHHhhh---ccCChhhhhhhhcCcc------
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYIL-VRERKGVSPQERIEKMLD---NEGPIFKDFANLVRLK------ 80 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~-~r~~~~~~~~~~~~~~~~---~~~~~~~~l~~~~~l~------ 80 (125)
+++++++||||+|+||+++++.|+++ |+.|.++ .|+... .......+.. ....+..|+.+...+.
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~~~---G~~v~i~~~r~~~~--~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~ 78 (254)
T PRK12746 4 LDGKVALVTGASRGIGRAIAMRLAND---GALVAIHYGRNKQA--ADETIREIESNGGKAFLIEADLNSIDGVKKLVEQL 78 (254)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC---CCEEEEEcCCCHHH--HHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHH
Confidence 45789999999999999999999998 7888775 454321 1111111111 0001112222211110
Q ss_pred -----------CCCeEEEeccccCc-------chhHHHHhHhhHHHHHHHHHHHhh
Q psy897 81 -----------TQRIRFIFLATLRF-------DEELKIAIRTNICATQTVVKLAKQ 118 (125)
Q Consensus 81 -----------~~~~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~~~ 118 (125)
..|+|||+||.... .+.+...+++|+.++.++++++.+
T Consensus 79 ~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 134 (254)
T PRK12746 79 KNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLP 134 (254)
T ss_pred HHHhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 13899999997522 134566778999999999998765
No 154
>PRK06101 short chain dehydrogenase; Provisional
Probab=99.19 E-value=1.1e-10 Score=79.40 Aligned_cols=99 Identities=11% Similarity=0.102 Sum_probs=64.6
Q ss_pred ceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhccCChhhhhhhhcCcc--------CCCeE
Q psy897 14 GVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDNEGPIFKDFANLVRLK--------TQRIR 85 (125)
Q Consensus 14 ~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~--------~~~~V 85 (125)
++++||||+|+||+++++.|+++ |++|++++|++.. .+.+.........+..|+.+...++ ..|.+
T Consensus 2 ~~vlItGas~giG~~la~~L~~~---G~~V~~~~r~~~~---~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~ 75 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQ---GWQVIACGRNQSV---LDELHTQSANIFTLAFDVTDHPGTKAALSQLPFIPELW 75 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhC---CCEEEEEECCHHH---HHHHHHhcCCCeEEEeeCCCHHHHHHHHHhcccCCCEE
Confidence 68999999999999999999998 7999999986432 1111111110011112333222111 23688
Q ss_pred EEeccccCc-------chhHHHHhHhhHHHHHHHHHHHhh
Q psy897 86 FIFLATLRF-------DEELKIAIRTNICATQTVVKLAKQ 118 (125)
Q Consensus 86 ih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~~~ 118 (125)
||+||.... .+.+...+++|+.|+.++++++..
T Consensus 76 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 115 (240)
T PRK06101 76 IFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQP 115 (240)
T ss_pred EEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 889886421 134667889999999999998764
No 155
>PRK07109 short chain dehydrogenase; Provisional
Probab=99.19 E-value=6.1e-11 Score=84.59 Aligned_cols=103 Identities=16% Similarity=0.158 Sum_probs=64.6
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCC-HHHHHHHhhhccCChhhhhhhhcCcc---------
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVS-PQERIEKMLDNEGPIFKDFANLVRLK--------- 80 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~l~--------- 80 (125)
+++++++||||+|+||+++++.|++. |++|++++|+..... ....+.........+..|+.+...++
T Consensus 6 l~~k~vlITGas~gIG~~la~~la~~---G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~ 82 (334)
T PRK07109 6 IGRQVVVITGASAGVGRATARAFARR---GAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEE 82 (334)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC---CCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 56789999999999999999999998 799999998654211 11112111110001112222211111
Q ss_pred --CCCeEEEeccccCc-------chhHHHHhHhhHHHHHHHHHHH
Q psy897 81 --TQRIRFIFLATLRF-------DEELKIAIRTNICATQTVVKLA 116 (125)
Q Consensus 81 --~~~~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~ 116 (125)
..|++||+||...+ .+.++..+++|+.|+.++++.+
T Consensus 83 ~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~ 127 (334)
T PRK07109 83 LGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAA 127 (334)
T ss_pred CCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHH
Confidence 23899999997522 1456778889998887766544
No 156
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=99.19 E-value=9.8e-11 Score=79.85 Aligned_cols=101 Identities=9% Similarity=0.089 Sum_probs=64.7
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHH----Hhhhc--cCChhhhhhhhcCccCCCe
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIE----KMLDN--EGPIFKDFANLVRLKTQRI 84 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~----~~~~~--~~~~~~~l~~~~~l~~~~~ 84 (125)
+++|+++||||+|+||+++++.|++. |++|++++|+..... ..... ++.+. ....++.+... ....|+
T Consensus 6 ~~~k~vlItGas~~iG~~la~~l~~~---G~~v~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~--~~~id~ 79 (252)
T PRK08220 6 FSGKTVWVTGAAQGIGYAVALAFVEA---GAKVIGFDQAFLTQE-DYPFATFVLDVSDAAAVAQVCQRLLAE--TGPLDV 79 (252)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC---CCEEEEEecchhhhc-CCceEEEEecCCCHHHHHHHHHHHHHH--cCCCCE
Confidence 56799999999999999999999998 799999988651000 00000 00000 00011111111 001389
Q ss_pred EEEeccccCc-------chhHHHHhHhhHHHHHHHHHHHh
Q psy897 85 RFIFLATLRF-------DEELKIAIRTNICATQTVVKLAK 117 (125)
Q Consensus 85 Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~~ 117 (125)
|||++|.... .+++...+++|+.++.++++++.
T Consensus 80 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 119 (252)
T PRK08220 80 LVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVM 119 (252)
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence 9999998532 24567788999999999999874
No 157
>PRK07062 short chain dehydrogenase; Provisional
Probab=99.19 E-value=1.5e-10 Score=79.67 Aligned_cols=103 Identities=14% Similarity=0.128 Sum_probs=65.9
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCC-HHHHHHHhhh--ccCChhhhhhhhcCcc-------
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVS-PQERIEKMLD--NEGPIFKDFANLVRLK------- 80 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~-~~~~~~~~~~--~~~~~~~~l~~~~~l~------- 80 (125)
+++|+++||||+|+||+++++.|++. |++|++++|+..... ..+.+.+... ....+..|+.+...+.
T Consensus 6 l~~k~~lItGas~giG~~ia~~l~~~---G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 82 (265)
T PRK07062 6 LEGRVAVVTGGSSGIGLATVELLLEA---GASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVE 82 (265)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHC---CCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHH
Confidence 56899999999999999999999998 799999999754321 1111111100 0001112232221110
Q ss_pred ----CCCeEEEeccccCc-------chhHHHHhHhhHHHHHHHHHHH
Q psy897 81 ----TQRIRFIFLATLRF-------DEELKIAIRTNICATQTVVKLA 116 (125)
Q Consensus 81 ----~~~~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~ 116 (125)
..|+|||+||.... .+.+...+++|+.+...+++.+
T Consensus 83 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~ 129 (265)
T PRK07062 83 ARFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAF 129 (265)
T ss_pred HhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHH
Confidence 23799999997521 1357778889999988887754
No 158
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=99.19 E-value=2.8e-10 Score=78.34 Aligned_cols=102 Identities=8% Similarity=0.008 Sum_probs=66.0
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHH----Hhhhc--cCChhhhhhhhcCccCCCe
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIE----KMLDN--EGPIFKDFANLVRLKTQRI 84 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~----~~~~~--~~~~~~~l~~~~~l~~~~~ 84 (125)
+++|+++||||+|+||+++++.|+++ |++|++++++....... ... ++.+. ....++.+...+ ...|+
T Consensus 7 l~~k~vlItG~s~gIG~~la~~l~~~---G~~v~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~--g~id~ 80 (266)
T PRK06171 7 LQGKIIIVTGGSSGIGLAIVKELLAN---GANVVNADIHGGDGQHE-NYQFVPTDVSSAEEVNHTVAEIIEKF--GRIDG 80 (266)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHC---CCEEEEEeCCccccccC-ceEEEEccCCCHHHHHHHHHHHHHHc--CCCCE
Confidence 56899999999999999999999998 79999998865432110 000 00000 000111111110 02289
Q ss_pred EEEeccccC----------------cchhHHHHhHhhHHHHHHHHHHHhh
Q psy897 85 RFIFLATLR----------------FDEELKIAIRTNICATQTVVKLAKQ 118 (125)
Q Consensus 85 Vih~a~~~~----------------~~~~~~~~~~~Nv~g~~~l~~~~~~ 118 (125)
|||+||... ..++++..+++|+.++..+++++..
T Consensus 81 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 130 (266)
T PRK06171 81 LVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVAR 130 (266)
T ss_pred EEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHH
Confidence 999999641 1145677889999999999987754
No 159
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=99.19 E-value=1.2e-10 Score=79.83 Aligned_cols=103 Identities=9% Similarity=0.029 Sum_probs=65.2
Q ss_pred CceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCC-HHHHHHHhhh--ccCChhhhhhhhcCc----------
Q psy897 13 DGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVS-PQERIEKMLD--NEGPIFKDFANLVRL---------- 79 (125)
Q Consensus 13 ~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~-~~~~~~~~~~--~~~~~~~~l~~~~~l---------- 79 (125)
+|+++||||+|+||+++++.|++. +++|++++|+..... ....+..... ....+..|+.+...+
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~---g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~ 78 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEE---GYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEI 78 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC---CCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHH
Confidence 578999999999999999999998 799999998654211 1111111100 000111122221111
Q ss_pred -cCCCeEEEeccccCc-------chhHHHHhHhhHHHHHHHHHHHhh
Q psy897 80 -KTQRIRFIFLATLRF-------DEELKIAIRTNICATQTVVKLAKQ 118 (125)
Q Consensus 80 -~~~~~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~~~ 118 (125)
...|+|||+||.... .+.++..+++|+.|+.++++++.+
T Consensus 79 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 125 (259)
T PRK12384 79 FGRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSR 125 (259)
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHH
Confidence 123799999997521 145677889999999988886643
No 160
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=99.19 E-value=7.2e-11 Score=80.86 Aligned_cols=104 Identities=13% Similarity=0.054 Sum_probs=66.6
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCC-HHHHHHHhhhccCChhhhhhhhcCc----------
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVS-PQERIEKMLDNEGPIFKDFANLVRL---------- 79 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~l---------- 79 (125)
+++|+++||||+|+||+++++.|++. |.++++++|...... ....+.........+..|+.+...+
T Consensus 9 l~~k~vlVtG~s~gIG~~la~~l~~~---G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~ 85 (255)
T PRK06113 9 LDGKCAIITGAGAGIGKEIAITFATA---GASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSK 85 (255)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHC---CCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 56899999999999999999999998 799999887543211 1111111000000011122221111
Q ss_pred -cCCCeEEEeccccCc---c---hhHHHHhHhhHHHHHHHHHHHh
Q psy897 80 -KTQRIRFIFLATLRF---D---EELKIAIRTNICATQTVVKLAK 117 (125)
Q Consensus 80 -~~~~~Vih~a~~~~~---~---~~~~~~~~~Nv~g~~~l~~~~~ 117 (125)
...|+|||+||.... + +++...+++|+.++.++++++.
T Consensus 86 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 130 (255)
T PRK06113 86 LGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVA 130 (255)
T ss_pred cCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHH
Confidence 023799999997522 1 4566778999999999999875
No 161
>PRK07035 short chain dehydrogenase; Provisional
Probab=99.19 E-value=6.7e-11 Score=80.80 Aligned_cols=103 Identities=12% Similarity=0.073 Sum_probs=64.6
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCC-HHHHHHHhhhccCChhhhhhhhcCc----------
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVS-PQERIEKMLDNEGPIFKDFANLVRL---------- 79 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~l---------- 79 (125)
+++|+++||||+|+||.++++.|++. |++|++++|+..... ..+.+.+.......+..|+.+...+
T Consensus 6 l~~k~vlItGas~gIG~~l~~~l~~~---G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 82 (252)
T PRK07035 6 LTGKIALVTGASRGIGEAIAKLLAQQ---GAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRER 82 (252)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHC---CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 56789999999999999999999998 799999998644211 1111111000000011122111111
Q ss_pred -cCCCeEEEeccccC--------cchhHHHHhHhhHHHHHHHHHHH
Q psy897 80 -KTQRIRFIFLATLR--------FDEELKIAIRTNICATQTVVKLA 116 (125)
Q Consensus 80 -~~~~~Vih~a~~~~--------~~~~~~~~~~~Nv~g~~~l~~~~ 116 (125)
...|+|||+||... ..++++..+++|+.++..+++++
T Consensus 83 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~ 128 (252)
T PRK07035 83 HGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEA 128 (252)
T ss_pred cCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHH
Confidence 02389999998632 11446678899999999888766
No 162
>PRK06172 short chain dehydrogenase; Provisional
Probab=99.19 E-value=7.9e-11 Score=80.46 Aligned_cols=103 Identities=14% Similarity=0.123 Sum_probs=64.9
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCC-HHHHHHHhhhccCChhhhhhhhcCc----------
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVS-PQERIEKMLDNEGPIFKDFANLVRL---------- 79 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~l---------- 79 (125)
+++|+++||||+|+||+++++.|++. |++|++++|+..... ....+.....+...+..|+.+...+
T Consensus 5 l~~k~ilItGas~~iG~~ia~~l~~~---G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~ 81 (253)
T PRK06172 5 FSGKVALVTGGAAGIGRATALAFARE---GAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAA 81 (253)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 56899999999999999999999998 789999998754211 1111111111000011122211111
Q ss_pred -cCCCeEEEeccccC----c----chhHHHHhHhhHHHHHHHHHHH
Q psy897 80 -KTQRIRFIFLATLR----F----DEELKIAIRTNICATQTVVKLA 116 (125)
Q Consensus 80 -~~~~~Vih~a~~~~----~----~~~~~~~~~~Nv~g~~~l~~~~ 116 (125)
...|+|||++|... + .++++..+++|+.++..+++++
T Consensus 82 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~ 127 (253)
T PRK06172 82 YGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQ 127 (253)
T ss_pred hCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHH
Confidence 02389999999742 1 1456778889999998877643
No 163
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.18 E-value=9.6e-11 Score=81.28 Aligned_cols=104 Identities=7% Similarity=-0.014 Sum_probs=66.3
Q ss_pred cCCceEEEecCcc--chhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhccCChhhhhhhhcCcc--------
Q psy897 11 YKDGVIFLTGGTG--FMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDNEGPIFKDFANLVRLK-------- 80 (125)
Q Consensus 11 ~~~~~vlitG~~G--~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~-------- 80 (125)
+++|+++||||++ +||++++++|++. |++|++.+|+.......+.+.+.......+..|+.+..+++
T Consensus 5 l~~k~~lVTGas~~~GIG~aiA~~la~~---Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~ 81 (271)
T PRK06505 5 MQGKRGLIMGVANDHSIAWGIAKQLAAQ---GAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEK 81 (271)
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHhC---CCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHH
Confidence 5789999999997 9999999999998 89999988753211111111110010001112333221111
Q ss_pred ---CCCeEEEeccccCc-----------chhHHHHhHhhHHHHHHHHHHHh
Q psy897 81 ---TQRIRFIFLATLRF-----------DEELKIAIRTNICATQTVVKLAK 117 (125)
Q Consensus 81 ---~~~~Vih~a~~~~~-----------~~~~~~~~~~Nv~g~~~l~~~~~ 117 (125)
..|++||+||.... .++|+..+++|+.++.++++++.
T Consensus 82 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~ 132 (271)
T PRK06505 82 KWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAA 132 (271)
T ss_pred HhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHH
Confidence 23799999997421 14677888999999999988654
No 164
>PRK08264 short chain dehydrogenase; Validated
Probab=99.18 E-value=8.3e-11 Score=79.63 Aligned_cols=98 Identities=17% Similarity=0.249 Sum_probs=64.9
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCcc-EEEEEecCCCCCCHHHHHHHhhhccCChhhhhhhhcCcc-------CC
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIH-SIYILVRERKGVSPQERIEKMLDNEGPIFKDFANLVRLK-------TQ 82 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~-------~~ 82 (125)
+.+++++||||+|+||+++++.|++. |. +|++++|+...... . ......+..|+.+...+. ..
T Consensus 4 ~~~~~vlItGgsg~iG~~la~~l~~~---G~~~V~~~~r~~~~~~~---~---~~~~~~~~~D~~~~~~~~~~~~~~~~i 74 (238)
T PRK08264 4 IKGKVVLVTGANRGIGRAFVEQLLAR---GAAKVYAAARDPESVTD---L---GPRVVPLQLDVTDPASVAAAAEAASDV 74 (238)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC---CcccEEEEecChhhhhh---c---CCceEEEEecCCCHHHHHHHHHhcCCC
Confidence 35789999999999999999999998 77 99999986543210 0 000001111222211111 23
Q ss_pred CeEEEeccc-cC-------cchhHHHHhHhhHHHHHHHHHHHh
Q psy897 83 RIRFIFLAT-LR-------FDEELKIAIRTNICATQTVVKLAK 117 (125)
Q Consensus 83 ~~Vih~a~~-~~-------~~~~~~~~~~~Nv~g~~~l~~~~~ 117 (125)
|+|||++|. .. ..+.+...+++|+.++..+++++.
T Consensus 75 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 117 (238)
T PRK08264 75 TILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFA 117 (238)
T ss_pred CEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 899999998 21 124566778899999999998764
No 165
>PRK08703 short chain dehydrogenase; Provisional
Probab=99.18 E-value=2.7e-10 Score=77.30 Aligned_cols=103 Identities=14% Similarity=0.138 Sum_probs=65.5
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhc----cCChhhhhhh-----------
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDN----EGPIFKDFAN----------- 75 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~----~~~~~~~l~~----------- 75 (125)
+++++++||||+|+||+++++.|++. |++|++++|+.... .....++... ......|+.+
T Consensus 4 l~~k~vlItG~sggiG~~la~~l~~~---g~~V~~~~r~~~~~--~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 78 (239)
T PRK08703 4 LSDKTILVTGASQGLGEQVAKAYAAA---GATVILVARHQKKL--EKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAA 78 (239)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHc---CCEEEEEeCChHHH--HHHHHHHHHcCCCCcceEEeeecccchHHHHHHHH
Confidence 46789999999999999999999998 79999999876421 1111111000 0000011110
Q ss_pred hc--Cc-cCCCeEEEeccccC----cc----hhHHHHhHhhHHHHHHHHHHHhh
Q psy897 76 LV--RL-KTQRIRFIFLATLR----FD----EELKIAIRTNICATQTVVKLAKQ 118 (125)
Q Consensus 76 ~~--~l-~~~~~Vih~a~~~~----~~----~~~~~~~~~Nv~g~~~l~~~~~~ 118 (125)
.. .+ ...|+|||+||... +. +++...+++|+.|+.++++++.+
T Consensus 79 ~i~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~ 132 (239)
T PRK08703 79 TIAEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFP 132 (239)
T ss_pred HHHHHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 00 01 12379999999741 11 45667789999999999887754
No 166
>PRK05866 short chain dehydrogenase; Provisional
Probab=99.18 E-value=6.8e-11 Score=82.90 Aligned_cols=103 Identities=15% Similarity=0.135 Sum_probs=64.4
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCC-HHHHHHHhhhccCChhhhhhhhcC-----------
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVS-PQERIEKMLDNEGPIFKDFANLVR----------- 78 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~----------- 78 (125)
+++++++||||+|+||+++++.|++. |++|++++|+..... ..+.+.........+..|+.+...
T Consensus 38 ~~~k~vlItGasggIG~~la~~La~~---G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 114 (293)
T PRK05866 38 LTGKRILLTGASSGIGEAAAEQFARR---GATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKR 114 (293)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC---CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 46789999999999999999999998 799999999754211 111111100000011112222111
Q ss_pred ccCCCeEEEeccccCc---------chhHHHHhHhhHHHHHHHHHHH
Q psy897 79 LKTQRIRFIFLATLRF---------DEELKIAIRTNICATQTVVKLA 116 (125)
Q Consensus 79 l~~~~~Vih~a~~~~~---------~~~~~~~~~~Nv~g~~~l~~~~ 116 (125)
+...|+|||+||.... .+.+...+++|+.|+..+++++
T Consensus 115 ~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~ 161 (293)
T PRK05866 115 IGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGL 161 (293)
T ss_pred cCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHH
Confidence 1123899999997521 1234567889999998888764
No 167
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=99.18 E-value=1.1e-10 Score=79.64 Aligned_cols=98 Identities=14% Similarity=0.127 Sum_probs=62.1
Q ss_pred ceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhh-ccCChhhhhhhhcCc-----------cC
Q psy897 14 GVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLD-NEGPIFKDFANLVRL-----------KT 81 (125)
Q Consensus 14 ~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~l-----------~~ 81 (125)
|+++||||+|+||+++++.|++. |++|++++|++... ..+..... ....+..|+.+...+ ..
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~---G~~V~~~~r~~~~~---~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~ 74 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQ---GHKVIATGRRQERL---QELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRN 74 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHC---CCEEEEEECCHHHH---HHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 57999999999999999999998 79999999865421 11111111 000111122221111 02
Q ss_pred CCeEEEeccccC--------cchhHHHHhHhhHHHHHHHHHHHh
Q psy897 82 QRIRFIFLATLR--------FDEELKIAIRTNICATQTVVKLAK 117 (125)
Q Consensus 82 ~~~Vih~a~~~~--------~~~~~~~~~~~Nv~g~~~l~~~~~ 117 (125)
.|+|||+||... ..++++..+++|+.|+..+++.+.
T Consensus 75 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 118 (248)
T PRK10538 75 IDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVL 118 (248)
T ss_pred CCEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence 379999999742 124567788999999877777643
No 168
>PRK07454 short chain dehydrogenase; Provisional
Probab=99.18 E-value=5.6e-11 Score=80.67 Aligned_cols=103 Identities=9% Similarity=0.058 Sum_probs=65.2
Q ss_pred CCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCC-HHHHHHHhhhccCChhhhhhhhcCc-----------
Q psy897 12 KDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVS-PQERIEKMLDNEGPIFKDFANLVRL----------- 79 (125)
Q Consensus 12 ~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~l----------- 79 (125)
++|+++||||+|+||+++++.|++. |.+|++++|++.... ....+.........+..|+.+...+
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~---G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKA---GWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQF 81 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC---CCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 4689999999999999999999998 789999998654211 1111111000000111222221111
Q ss_pred cCCCeEEEeccccCcc-------hhHHHHhHhhHHHHHHHHHHHh
Q psy897 80 KTQRIRFIFLATLRFD-------EELKIAIRTNICATQTVVKLAK 117 (125)
Q Consensus 80 ~~~~~Vih~a~~~~~~-------~~~~~~~~~Nv~g~~~l~~~~~ 117 (125)
...|+|||++|..... +++...+++|+.++.++++.+.
T Consensus 82 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 126 (241)
T PRK07454 82 GCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVL 126 (241)
T ss_pred CCCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHH
Confidence 0238999999975321 3566778899999999887653
No 169
>PRK06914 short chain dehydrogenase; Provisional
Probab=99.18 E-value=9.2e-11 Score=81.30 Aligned_cols=102 Identities=12% Similarity=0.061 Sum_probs=64.5
Q ss_pred CCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHH-HHHHHhh-h-ccCChhhhhhhhcC----------
Q psy897 12 KDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQ-ERIEKML-D-NEGPIFKDFANLVR---------- 78 (125)
Q Consensus 12 ~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~-~~~~~~~-~-~~~~~~~~l~~~~~---------- 78 (125)
++++++||||+|++|+++++.|+++ |++|++++|++...... ....... + ....+..|+.+...
T Consensus 2 ~~k~~lItGasg~iG~~la~~l~~~---G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~ 78 (280)
T PRK06914 2 NKKIAIVTGASSGFGLLTTLELAKK---GYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHNFQLVLKE 78 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHhC---CCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHHHHHHHHh
Confidence 4678999999999999999999998 79999999875422111 1111100 0 00001112222111
Q ss_pred ccCCCeEEEeccccCc-------chhHHHHhHhhHHHHHHHHHHH
Q psy897 79 LKTQRIRFIFLATLRF-------DEELKIAIRTNICATQTVVKLA 116 (125)
Q Consensus 79 l~~~~~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~ 116 (125)
+...|+|||+||.... .+.+...+++|+.++.++++.+
T Consensus 79 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~ 123 (280)
T PRK06914 79 IGRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAV 123 (280)
T ss_pred cCCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHH
Confidence 1123799999997532 1456677889999999998875
No 170
>PRK07577 short chain dehydrogenase; Provisional
Probab=99.18 E-value=5.9e-10 Score=75.23 Aligned_cols=99 Identities=14% Similarity=0.067 Sum_probs=64.3
Q ss_pred CCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHH--Hhhhc--cCChhhhhhhhcCccCCCeEEE
Q psy897 12 KDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIE--KMLDN--EGPIFKDFANLVRLKTQRIRFI 87 (125)
Q Consensus 12 ~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~--~~~~~--~~~~~~~l~~~~~l~~~~~Vih 87 (125)
++|+++||||+|+||+++++.|+++ |++|++++|+....... .+. ++.+. ....+..+....++ |+|||
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~---G~~v~~~~r~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~~~---d~vi~ 74 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANL---GHQVIGIARSAIDDFPG-ELFACDLADIEQTAATLAQINEIHPV---DAIVN 74 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHC---CCEEEEEeCCcccccCc-eEEEeeCCCHHHHHHHHHHHHHhCCC---cEEEE
Confidence 4689999999999999999999998 79999999975531100 000 00000 00011122222233 89999
Q ss_pred eccccCc-------chhHHHHhHhhHHHHHHHHHHHh
Q psy897 88 FLATLRF-------DEELKIAIRTNICATQTVVKLAK 117 (125)
Q Consensus 88 ~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~~ 117 (125)
++|.... .+++...+++|+.++.++.+++.
T Consensus 75 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 111 (234)
T PRK07577 75 NVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFL 111 (234)
T ss_pred CCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 9998532 24566788899999988877653
No 171
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.18 E-value=1.3e-10 Score=80.60 Aligned_cols=104 Identities=6% Similarity=0.006 Sum_probs=67.5
Q ss_pred cccCCceEEEecCc--cchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhh---hccCChhhhhhhhcCcc---
Q psy897 9 DFYKDGVIFLTGGT--GFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKML---DNEGPIFKDFANLVRLK--- 80 (125)
Q Consensus 9 ~~~~~~~vlitG~~--G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~l~--- 80 (125)
..+++|+++||||+ +.||.++++.|++. |++|++..|... ..+...++. .....+..|+.+...++
T Consensus 6 ~~~~~k~~lItGas~~~GIG~aia~~la~~---G~~V~l~~r~~~---~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~ 79 (272)
T PRK08159 6 GLMAGKRGLILGVANNRSIAWGIAKACRAA---GAELAFTYQGDA---LKKRVEPLAAELGAFVAGHCDVTDEASIDAVF 79 (272)
T ss_pred ccccCCEEEEECCCCCCcHHHHHHHHHHHC---CCEEEEEcCchH---HHHHHHHHHHhcCCceEEecCCCCHHHHHHHH
Confidence 35678999999997 89999999999998 799988876422 111222221 10011112332221111
Q ss_pred --------CCCeEEEeccccCc-----------chhHHHHhHhhHHHHHHHHHHHhh
Q psy897 81 --------TQRIRFIFLATLRF-----------DEELKIAIRTNICATQTVVKLAKQ 118 (125)
Q Consensus 81 --------~~~~Vih~a~~~~~-----------~~~~~~~~~~Nv~g~~~l~~~~~~ 118 (125)
..|++||+||.... .++++..+++|+.++..+++.+..
T Consensus 80 ~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~ 136 (272)
T PRK08159 80 ETLEKKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEK 136 (272)
T ss_pred HHHHHhcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 23899999997521 146788889999999999987654
No 172
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=99.17 E-value=1.9e-10 Score=78.40 Aligned_cols=108 Identities=19% Similarity=0.127 Sum_probs=68.2
Q ss_pred cccccCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCC-HHHHHHHhhh-ccCChhhhhh--hhc-----
Q psy897 7 VEDFYKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVS-PQERIEKMLD-NEGPIFKDFA--NLV----- 77 (125)
Q Consensus 7 ~~~~~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~-~~~~~~~~~~-~~~~~~~~l~--~~~----- 77 (125)
....+++|+++||||+|+||.++++.|++. |++|++++|+..... ....+.+... ....+..|+. +..
T Consensus 6 ~~~~~~~k~vlItG~~g~iG~~la~~l~~~---G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~ 82 (247)
T PRK08945 6 KPDLLKDRIILVTGAGDGIGREAALTYARH---GATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQL 82 (247)
T ss_pred cccccCCCEEEEeCCCchHHHHHHHHHHHC---CCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHH
Confidence 345678999999999999999999999998 789999998654211 0111111100 0000001111 000
Q ss_pred ------CccCCCeEEEeccccCc--------chhHHHHhHhhHHHHHHHHHHHh
Q psy897 78 ------RLKTQRIRFIFLATLRF--------DEELKIAIRTNICATQTVVKLAK 117 (125)
Q Consensus 78 ------~l~~~~~Vih~a~~~~~--------~~~~~~~~~~Nv~g~~~l~~~~~ 117 (125)
.....|+|||+||.... .+.+...+++|+.|+.++++++.
T Consensus 83 ~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~ 136 (247)
T PRK08945 83 ADTIEEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALL 136 (247)
T ss_pred HHHHHHHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHH
Confidence 00023899999997421 14567788999999999988764
No 173
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.17 E-value=1.2e-10 Score=78.90 Aligned_cols=103 Identities=16% Similarity=0.167 Sum_probs=63.8
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCC--HHHHHHHhhhccCChhhhhhhhcCc---------
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVS--PQERIEKMLDNEGPIFKDFANLVRL--------- 79 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~l--------- 79 (125)
+++|+++||||+|+||++|++.|+++ +++|++..+...... ..............+..|+.+...+
T Consensus 4 ~~~~~vlItGasg~iG~~l~~~l~~~---g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 80 (249)
T PRK12825 4 LMGRVALVTGAARGLGRAIALRLARA---GADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVE 80 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC---CCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHH
Confidence 35689999999999999999999998 788877666543210 0011111000000011122211111
Q ss_pred --cCCCeEEEeccccCc-------chhHHHHhHhhHHHHHHHHHHH
Q psy897 80 --KTQRIRFIFLATLRF-------DEELKIAIRTNICATQTVVKLA 116 (125)
Q Consensus 80 --~~~~~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~ 116 (125)
...|+|||+||.... .+.+...+++|+.++.++++.+
T Consensus 81 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~ 126 (249)
T PRK12825 81 RFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAV 126 (249)
T ss_pred HcCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHH
Confidence 123899999997522 2346677889999999999876
No 174
>PRK05993 short chain dehydrogenase; Provisional
Probab=99.17 E-value=1.7e-10 Score=80.11 Aligned_cols=99 Identities=16% Similarity=0.132 Sum_probs=61.7
Q ss_pred CceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhccCChhhhhhhhcCc------------c
Q psy897 13 DGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDNEGPIFKDFANLVRL------------K 80 (125)
Q Consensus 13 ~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l------------~ 80 (125)
+|+++||||+|+||+++++.|++. |++|++++|++... ..+....- ..+..|+.+...+ .
T Consensus 4 ~k~vlItGasggiG~~la~~l~~~---G~~Vi~~~r~~~~~---~~l~~~~~--~~~~~Dl~d~~~~~~~~~~~~~~~~g 75 (277)
T PRK05993 4 KRSILITGCSSGIGAYCARALQSD---GWRVFATCRKEEDV---AALEAEGL--EAFQLDYAEPESIAALVAQVLELSGG 75 (277)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHC---CCEEEEEECCHHHH---HHHHHCCc--eEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 578999999999999999999998 79999999865421 11111000 0011122211100 0
Q ss_pred CCCeEEEeccccCc-------chhHHHHhHhhHHHHHH----HHHHHhhC
Q psy897 81 TQRIRFIFLATLRF-------DEELKIAIRTNICATQT----VVKLAKQC 119 (125)
Q Consensus 81 ~~~~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~----l~~~~~~~ 119 (125)
..|+|||+||.... .+.+...+++|+.|+.. +++.+++.
T Consensus 76 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~ 125 (277)
T PRK05993 76 RLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQ 125 (277)
T ss_pred CccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhc
Confidence 12799999997522 13466788999999554 45555443
No 175
>PRK07102 short chain dehydrogenase; Provisional
Probab=99.17 E-value=1.6e-10 Score=78.52 Aligned_cols=103 Identities=14% Similarity=0.086 Sum_probs=64.8
Q ss_pred CceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCC-HHHHHHHhhh-ccCChhhhhhhhcCcc--------CC
Q psy897 13 DGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVS-PQERIEKMLD-NEGPIFKDFANLVRLK--------TQ 82 (125)
Q Consensus 13 ~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~-~~~~~~~~~~-~~~~~~~~l~~~~~l~--------~~ 82 (125)
+|+++||||+|+||.+++++|+++ |++|++++|++.... ..+.+..... ....+..|+.+...++ ..
T Consensus 1 ~~~vlItGas~giG~~~a~~l~~~---G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 77 (243)
T PRK07102 1 MKKILIIGATSDIARACARRYAAA---GARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPALP 77 (243)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhc---CCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcC
Confidence 478999999999999999999998 799999998754211 0111111000 0001112333221111 12
Q ss_pred CeEEEeccccCc-------chhHHHHhHhhHHHHHHHHHHHhh
Q psy897 83 RIRFIFLATLRF-------DEELKIAIRTNICATQTVVKLAKQ 118 (125)
Q Consensus 83 ~~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~~~ 118 (125)
|+|||++|.... .+++...+++|+.++.++++++..
T Consensus 78 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 120 (243)
T PRK07102 78 DIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLAN 120 (243)
T ss_pred CEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 799999997522 134456778999999999987653
No 176
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=99.17 E-value=1.3e-10 Score=79.15 Aligned_cols=104 Identities=14% Similarity=0.125 Sum_probs=64.8
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhc---cCChhhhhhhhcCc--------
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDN---EGPIFKDFANLVRL-------- 79 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~l~~~~~l-------- 79 (125)
+++++++||||+|+||++++++|+++ ++.|++..+.... .......++... ...+..|+.+...+
T Consensus 4 ~~~~~~lItG~s~~iG~~la~~l~~~---g~~v~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 79 (247)
T PRK12935 4 LNGKVAIVTGGAKGIGKAITVALAQE---GAKVVINYNSSKE-AAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAV 79 (247)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHc---CCEEEEEcCCcHH-HHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 45799999999999999999999998 7888775543221 111111111110 00011122221111
Q ss_pred ---cCCCeEEEeccccCc-------chhHHHHhHhhHHHHHHHHHHHhh
Q psy897 80 ---KTQRIRFIFLATLRF-------DEELKIAIRTNICATQTVVKLAKQ 118 (125)
Q Consensus 80 ---~~~~~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~~~ 118 (125)
...|+|||+||.... .+.++..+++|+.++.++++++..
T Consensus 80 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 128 (247)
T PRK12935 80 NHFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLP 128 (247)
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 123899999998532 146777889999999999998753
No 177
>PRK12744 short chain dehydrogenase; Provisional
Probab=99.17 E-value=2.2e-10 Score=78.51 Aligned_cols=105 Identities=12% Similarity=0.130 Sum_probs=65.2
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCC-CCHHHHH-HHhh--h-ccCChhhhhhhhcCcc-----
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKG-VSPQERI-EKML--D-NEGPIFKDFANLVRLK----- 80 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~-~~~~~~~-~~~~--~-~~~~~~~~l~~~~~l~----- 80 (125)
+++|+++||||+|+||.++++.|++. |++++++.+.... ....... .++. . ....+..|+.+...+.
T Consensus 6 l~~k~vlItGa~~gIG~~~a~~l~~~---G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~ 82 (257)
T PRK12744 6 LKGKVVLIAGGAKNLGGLIARDLAAQ---GAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDD 82 (257)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHC---CCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHH
Confidence 56789999999999999999999998 7887777654321 1111111 1110 0 0000111222211111
Q ss_pred ------CCCeEEEeccccCc-------chhHHHHhHhhHHHHHHHHHHHhh
Q psy897 81 ------TQRIRFIFLATLRF-------DEELKIAIRTNICATQTVVKLAKQ 118 (125)
Q Consensus 81 ------~~~~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~~~ 118 (125)
..|+|||+||.... .+.++..+++|+.++..+++++.+
T Consensus 83 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~ 133 (257)
T PRK12744 83 AKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGR 133 (257)
T ss_pred HHHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHH
Confidence 23799999997421 145777889999999999998754
No 178
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.17 E-value=2.1e-10 Score=78.87 Aligned_cols=103 Identities=15% Similarity=0.026 Sum_probs=65.2
Q ss_pred cCCceEEEecC--ccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhh-ccCChhhhhhhhcCcc-------
Q psy897 11 YKDGVIFLTGG--TGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLD-NEGPIFKDFANLVRLK------- 80 (125)
Q Consensus 11 ~~~~~vlitG~--~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~l~------- 80 (125)
+++|+++|||| +++||.++++.|++. |++|++.+|+... ...+.+.+... ....+..|+.+...++
T Consensus 5 ~~~k~~lItGa~~s~GIG~a~a~~la~~---G~~v~l~~r~~~~-~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~ 80 (256)
T PRK07889 5 LEGKRILVTGVITDSSIAFHVARVAQEQ---GAEVVLTGFGRAL-RLTERIAKRLPEPAPVLELDVTNEEHLASLADRVR 80 (256)
T ss_pred ccCCEEEEeCCCCcchHHHHHHHHHHHC---CCEEEEecCccch-hHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHH
Confidence 56899999999 899999999999998 7999998875421 11112211111 0011112222211111
Q ss_pred ----CCCeEEEeccccCc-------c----hhHHHHhHhhHHHHHHHHHHHh
Q psy897 81 ----TQRIRFIFLATLRF-------D----EELKIAIRTNICATQTVVKLAK 117 (125)
Q Consensus 81 ----~~~~Vih~a~~~~~-------~----~~~~~~~~~Nv~g~~~l~~~~~ 117 (125)
..|++||+||.... . +++...+++|+.+++.+.+.+.
T Consensus 81 ~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~ 132 (256)
T PRK07889 81 EHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALL 132 (256)
T ss_pred HHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 23799999997521 1 3456678999999999888654
No 179
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=99.17 E-value=1e-10 Score=82.27 Aligned_cols=102 Identities=20% Similarity=0.265 Sum_probs=63.6
Q ss_pred eEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCH-HHHHHHhhhccCChhhhhhhhcCcc------CCCeEEE
Q psy897 15 VIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSP-QERIEKMLDNEGPIFKDFANLVRLK------TQRIRFI 87 (125)
Q Consensus 15 ~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~l~------~~~~Vih 87 (125)
+|+||||+|+||+++++.|++. +++|+++++....... ......... ...+..|+.+...+. ..|+|||
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~---g~~V~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D~~~~~~~~~~~~~~~~d~vv~ 76 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLES---GHEVVVLDNLSNGSPEALKRGERITR-VTFVEGDLRDRELLDRLFEEHKIDAVIH 76 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhC---CCeEEEEeCCCccchhhhhhhccccc-eEEEECCCCCHHHHHHHHHhCCCcEEEE
Confidence 5899999999999999999998 7888887664332111 111110000 001111222211111 2389999
Q ss_pred eccccCcc---hhHHHHhHhhHHHHHHHHHHHhhCC
Q psy897 88 FLATLRFD---EELKIAIRTNICATQTVVKLAKQCP 120 (125)
Q Consensus 88 ~a~~~~~~---~~~~~~~~~Nv~g~~~l~~~~~~~~ 120 (125)
+||..... .++...++.|+.++.+++++|++.+
T Consensus 77 ~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 112 (328)
T TIGR01179 77 FAGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQTG 112 (328)
T ss_pred CccccCcchhhcCchhhhhhhHHHHHHHHHHHHhcC
Confidence 99976332 2445677899999999999998764
No 180
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.16 E-value=1.2e-10 Score=80.97 Aligned_cols=104 Identities=11% Similarity=0.011 Sum_probs=66.1
Q ss_pred cCCceEEEecCc--cchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhccCChhhhhhhhcCcc--------
Q psy897 11 YKDGVIFLTGGT--GFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDNEGPIFKDFANLVRLK-------- 80 (125)
Q Consensus 11 ~~~~~vlitG~~--G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~-------- 80 (125)
+++|+++||||+ ++||.++++.|++. |++|++.+|+.......+.+.+-......+..|+.+...++
T Consensus 3 l~~k~~lItGas~~~GIG~aiA~~la~~---G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~ 79 (274)
T PRK08415 3 MKGKKGLIVGVANNKSIAYGIAKACFEQ---GAELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKK 79 (274)
T ss_pred cCCcEEEEECCCCCCCHHHHHHHHHHHC---CCEEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHH
Confidence 357999999997 79999999999998 79999988864211111111111110011112333222111
Q ss_pred ---CCCeEEEeccccCc-----------chhHHHHhHhhHHHHHHHHHHHh
Q psy897 81 ---TQRIRFIFLATLRF-----------DEELKIAIRTNICATQTVVKLAK 117 (125)
Q Consensus 81 ---~~~~Vih~a~~~~~-----------~~~~~~~~~~Nv~g~~~l~~~~~ 117 (125)
..|++||+||.... .+.++..+++|+.|++.+.+++-
T Consensus 80 ~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~ 130 (274)
T PRK08415 80 DLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALL 130 (274)
T ss_pred HcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHH
Confidence 23799999997421 14577888999999999988654
No 181
>PRK08177 short chain dehydrogenase; Provisional
Probab=99.16 E-value=7.1e-11 Score=79.55 Aligned_cols=99 Identities=16% Similarity=0.115 Sum_probs=64.7
Q ss_pred CceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhccCChhhhhhhhcCc-------c--CCC
Q psy897 13 DGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDNEGPIFKDFANLVRL-------K--TQR 83 (125)
Q Consensus 13 ~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l-------~--~~~ 83 (125)
+++++||||+|+||+++++.|++. |++|++++|++.... .+.+... ......|+.+...+ . ..|
T Consensus 1 ~k~vlItG~sg~iG~~la~~l~~~---G~~V~~~~r~~~~~~---~~~~~~~-~~~~~~D~~d~~~~~~~~~~~~~~~id 73 (225)
T PRK08177 1 KRTALIIGASRGLGLGLVDRLLER---GWQVTATVRGPQQDT---ALQALPG-VHIEKLDMNDPASLDQLLQRLQGQRFD 73 (225)
T ss_pred CCEEEEeCCCchHHHHHHHHHHhC---CCEEEEEeCCCcchH---HHHhccc-cceEEcCCCCHHHHHHHHHHhhcCCCC
Confidence 368999999999999999999998 799999999765321 1111101 01111122211111 0 237
Q ss_pred eEEEeccccCc---------chhHHHHhHhhHHHHHHHHHHHhh
Q psy897 84 IRFIFLATLRF---------DEELKIAIRTNICATQTVVKLAKQ 118 (125)
Q Consensus 84 ~Vih~a~~~~~---------~~~~~~~~~~Nv~g~~~l~~~~~~ 118 (125)
+|||+||.... .+++...+++|+.++.++++++..
T Consensus 74 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 117 (225)
T PRK08177 74 LLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLG 117 (225)
T ss_pred EEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHH
Confidence 99999998521 134666778999999999887653
No 182
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=99.16 E-value=1.4e-10 Score=79.85 Aligned_cols=104 Identities=13% Similarity=0.051 Sum_probs=66.1
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCC-HHHHHHHhhhccCChhhhhhhhcCc----------
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVS-PQERIEKMLDNEGPIFKDFANLVRL---------- 79 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~l---------- 79 (125)
+.+|+++||||+|+||.+++++|++. |++|++++|+..... ....+.........+..|+.+...+
T Consensus 8 ~~~k~~lItGa~~~iG~~ia~~l~~~---G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 84 (265)
T PRK07097 8 LKGKIALITGASYGIGFAIAKAYAKA---GATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKE 84 (265)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC---CCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence 46799999999999999999999998 799999887654211 1111111000000111222222111
Q ss_pred -cCCCeEEEeccccCc-------chhHHHHhHhhHHHHHHHHHHHh
Q psy897 80 -KTQRIRFIFLATLRF-------DEELKIAIRTNICATQTVVKLAK 117 (125)
Q Consensus 80 -~~~~~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~~ 117 (125)
...|+|||+||.... .+.+...+++|+.|+..+.+++.
T Consensus 85 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 130 (265)
T PRK07097 85 VGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVI 130 (265)
T ss_pred CCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHH
Confidence 023899999998532 24567788899999998887654
No 183
>PRK09242 tropinone reductase; Provisional
Probab=99.16 E-value=1.1e-10 Score=79.99 Aligned_cols=104 Identities=12% Similarity=0.152 Sum_probs=66.9
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCC-HHHHHHHhh-h-ccCChhhhhhhhcCc--------
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVS-PQERIEKML-D-NEGPIFKDFANLVRL-------- 79 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~-~~~~~~~~~-~-~~~~~~~~l~~~~~l-------- 79 (125)
+.+|+++||||+|+||+++++.|++. |++|++++|+.+... ....+.... . +...+..|+.+...+
T Consensus 7 ~~~k~~lItGa~~gIG~~~a~~l~~~---G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 83 (257)
T PRK09242 7 LDGQTALITGASKGIGLAIAREFLGL---GADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVE 83 (257)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 46899999999999999999999998 799999998654211 111111110 0 000011122221111
Q ss_pred ---cCCCeEEEeccccCc-------chhHHHHhHhhHHHHHHHHHHHh
Q psy897 80 ---KTQRIRFIFLATLRF-------DEELKIAIRTNICATQTVVKLAK 117 (125)
Q Consensus 80 ---~~~~~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~~ 117 (125)
...|+|||+||.... .+++...+++|+.++.++++++.
T Consensus 84 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 131 (257)
T PRK09242 84 DHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAH 131 (257)
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHH
Confidence 123799999997421 24677788999999999988764
No 184
>PRK05865 hypothetical protein; Provisional
Probab=99.16 E-value=8e-11 Score=92.21 Aligned_cols=90 Identities=20% Similarity=0.149 Sum_probs=62.2
Q ss_pred ceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhccCChhhhhhhhcCc----cCCCeEEEec
Q psy897 14 GVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDNEGPIFKDFANLVRL----KTQRIRFIFL 89 (125)
Q Consensus 14 ~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l----~~~~~Vih~a 89 (125)
|+|+||||+||||+++++.|+++ |++|++++|+..... ...+ ..+..|+.+...+ +..|+|||+|
T Consensus 1 MkILVTGATGfIGs~La~~Ll~~---G~~Vv~l~R~~~~~~-~~~v-------~~v~gDL~D~~~l~~al~~vD~VVHlA 69 (854)
T PRK05865 1 MRIAVTGASGVLGRGLTARLLSQ---GHEVVGIARHRPDSW-PSSA-------DFIAADIRDATAVESAMTGADVVAHCA 69 (854)
T ss_pred CEEEEECCCCHHHHHHHHHHHHC---cCEEEEEECCchhhc-ccCc-------eEEEeeCCCHHHHHHHHhCCCEEEECC
Confidence 57999999999999999999998 799999998643210 0000 1111222221111 1238999999
Q ss_pred cccCcchhHHHHhHhhHHHHHHHHHHHhhCC
Q psy897 90 ATLRFDEELKIAIRTNICATQTVVKLAKQCP 120 (125)
Q Consensus 90 ~~~~~~~~~~~~~~~Nv~g~~~l~~~~~~~~ 120 (125)
+.... .+++|+.++.+++++|++.+
T Consensus 70 a~~~~------~~~vNv~GT~nLLeAa~~~g 94 (854)
T PRK05865 70 WVRGR------NDHINIDGTANVLKAMAETG 94 (854)
T ss_pred Ccccc------hHHHHHHHHHHHHHHHHHcC
Confidence 86532 45789999999999998764
No 185
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=99.16 E-value=1e-10 Score=79.72 Aligned_cols=99 Identities=12% Similarity=0.049 Sum_probs=63.7
Q ss_pred CceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhh----ccCChhhhhhhhcC----------
Q psy897 13 DGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLD----NEGPIFKDFANLVR---------- 78 (125)
Q Consensus 13 ~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~~---------- 78 (125)
+|+++||||+|+||+++++.|++. |++|++++|+.... +.+..... .......|+.+...
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~---g~~v~~~~r~~~~~---~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 74 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAA---GANVVVNDLGEAGA---EAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAA 74 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHC---CCEEEEEeCCHHHH---HHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence 468999999999999999999998 78999999965421 11111111 00011112222110
Q ss_pred -ccCCCeEEEeccccCc-------chhHHHHhHhhHHHHHHHHHHHh
Q psy897 79 -LKTQRIRFIFLATLRF-------DEELKIAIRTNICATQTVVKLAK 117 (125)
Q Consensus 79 -l~~~~~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~~ 117 (125)
+...|+|||++|.... .++++..+++|+.|+..+++.+.
T Consensus 75 ~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~ 121 (255)
T TIGR01963 75 EFGGLDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAAL 121 (255)
T ss_pred hcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 1123799999997532 13456677899999999988763
No 186
>PRK09291 short chain dehydrogenase; Provisional
Probab=99.16 E-value=1e-10 Score=80.03 Aligned_cols=98 Identities=13% Similarity=0.054 Sum_probs=62.1
Q ss_pred CceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhh----ccCChhhhhhhhcCcc-----CCC
Q psy897 13 DGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLD----NEGPIFKDFANLVRLK-----TQR 83 (125)
Q Consensus 13 ~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~~l~-----~~~ 83 (125)
+++++||||+|+||+++++.|++. |++|++++|++... ..+.+... .......|+.+...+. ..|
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~---G~~v~~~~r~~~~~---~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id 75 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARK---GHNVIAGVQIAPQV---TALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVD 75 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHC---CCEEEEEeCCHHHH---HHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCC
Confidence 468999999999999999999998 79999998864321 11111111 0001112232211111 238
Q ss_pred eEEEeccccCc-------chhHHHHhHhhHHHHHHHHHHH
Q psy897 84 IRFIFLATLRF-------DEELKIAIRTNICATQTVVKLA 116 (125)
Q Consensus 84 ~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~ 116 (125)
+|||+||.... .+.++..+++|+.++..+.+.+
T Consensus 76 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~ 115 (257)
T PRK09291 76 VLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGF 115 (257)
T ss_pred EEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHH
Confidence 99999997521 1346677889999988776643
No 187
>PRK12743 oxidoreductase; Provisional
Probab=99.16 E-value=1.7e-10 Score=79.06 Aligned_cols=103 Identities=12% Similarity=0.010 Sum_probs=64.6
Q ss_pred CceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCC--CHHHHHHHhhhccCChhhhhhhhcCc-----------
Q psy897 13 DGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGV--SPQERIEKMLDNEGPIFKDFANLVRL----------- 79 (125)
Q Consensus 13 ~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~l----------- 79 (125)
+|+++||||+|+||+++++.|++. |++|+++.+..... .....+.........+..|+.+...+
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~---G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 78 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQ---GFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRL 78 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHC---CCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 578999999999999999999998 79998876543311 01111111111000111222221111
Q ss_pred cCCCeEEEeccccCc-------chhHHHHhHhhHHHHHHHHHHHhh
Q psy897 80 KTQRIRFIFLATLRF-------DEELKIAIRTNICATQTVVKLAKQ 118 (125)
Q Consensus 80 ~~~~~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~~~ 118 (125)
...|+|||++|.... .+.+...+++|+.++..+++++..
T Consensus 79 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 124 (256)
T PRK12743 79 GRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAAR 124 (256)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 023899999997532 145677889999999999987654
No 188
>KOG1200|consensus
Probab=99.16 E-value=1.9e-10 Score=75.55 Aligned_cols=105 Identities=15% Similarity=0.156 Sum_probs=72.2
Q ss_pred cccCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhc-cCChh-hhhhhhc---------
Q psy897 9 DFYKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDN-EGPIF-KDFANLV--------- 77 (125)
Q Consensus 9 ~~~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~-~~l~~~~--------- 77 (125)
+.+..+..+||||+++||++|++.|.+. |.++.+.+++.... +.....+... .+..| .|+....
T Consensus 10 ~r~~sk~~~vtGg~sGIGrAia~~la~~---Garv~v~dl~~~~A--~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~ 84 (256)
T KOG1200|consen 10 QRLMSKVAAVTGGSSGIGRAIAQLLAKK---GARVAVADLDSAAA--EATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEM 84 (256)
T ss_pred HHHhcceeEEecCCchHHHHHHHHHHhc---CcEEEEeecchhhH--HHHHhhcCCCCccceeeeccCcHHHHHHHHHHH
Confidence 4456789999999999999999999998 89999998866521 2222222110 01111 1222221
Q ss_pred --CccCCCeEEEeccccCc-------chhHHHHhHhhHHHHHHHHHHHhh
Q psy897 78 --RLKTQRIRFIFLATLRF-------DEELKIAIRTNICATQTVVKLAKQ 118 (125)
Q Consensus 78 --~l~~~~~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~~~ 118 (125)
.+..+++++||||+++. .++|+..+.+|+.|++.+.+++.+
T Consensus 85 ~k~~g~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r 134 (256)
T KOG1200|consen 85 EKSLGTPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVR 134 (256)
T ss_pred HHhcCCCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHH
Confidence 11145799999999842 278999999999999999987655
No 189
>PRK09186 flagellin modification protein A; Provisional
Probab=99.16 E-value=2.6e-10 Score=77.94 Aligned_cols=104 Identities=13% Similarity=0.153 Sum_probs=64.3
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCC-HHHHHHHhhhc--cCChhhhhhhhcCcc-------
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVS-PQERIEKMLDN--EGPIFKDFANLVRLK------- 80 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~-~~~~~~~~~~~--~~~~~~~l~~~~~l~------- 80 (125)
+++|+++||||+|+||+++++.|++. +++|++++|++.... ....+...... ...+..|+.+...+.
T Consensus 2 ~~~k~vlItGas~giG~~~a~~l~~~---g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 78 (256)
T PRK09186 2 LKGKTILITGAGGLIGSALVKAILEA---GGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSA 78 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC---CCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHH
Confidence 46799999999999999999999998 799999988654211 11111110000 000112333221111
Q ss_pred ----CCCeEEEeccccC------c----chhHHHHhHhhHHHHHHHHHHHh
Q psy897 81 ----TQRIRFIFLATLR------F----DEELKIAIRTNICATQTVVKLAK 117 (125)
Q Consensus 81 ----~~~~Vih~a~~~~------~----~~~~~~~~~~Nv~g~~~l~~~~~ 117 (125)
..|+|||+|+... + .+.+...+++|+.++..+++++.
T Consensus 79 ~~~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 129 (256)
T PRK09186 79 EKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFA 129 (256)
T ss_pred HHcCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHH
Confidence 1389999997531 1 13466677899999888777554
No 190
>PRK07023 short chain dehydrogenase; Provisional
Probab=99.15 E-value=2.5e-10 Score=77.60 Aligned_cols=102 Identities=13% Similarity=0.096 Sum_probs=61.5
Q ss_pred CceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHH-Hh--hh-cc--CChhhh-----hhhhcCc-c
Q psy897 13 DGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIE-KM--LD-NE--GPIFKD-----FANLVRL-K 80 (125)
Q Consensus 13 ~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~-~~--~~-~~--~~~~~~-----l~~~~~l-~ 80 (125)
+++++||||+|+||+++++.|++. |++|++++|+..... ..... +. .. +. ...... +.....- .
T Consensus 1 ~~~vlItGasggiG~~ia~~l~~~---G~~v~~~~r~~~~~~-~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~ 76 (243)
T PRK07023 1 AVRAIVTGHSRGLGAALAEQLLQP---GIAVLGVARSRHPSL-AAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGA 76 (243)
T ss_pred CceEEEecCCcchHHHHHHHHHhC---CCEEEEEecCcchhh-hhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCC
Confidence 368999999999999999999998 799999998654211 00000 00 00 00 000011 1110000 0
Q ss_pred CCCeEEEeccccCc--------chhHHHHhHhhHHHHHHHHHHHhh
Q psy897 81 TQRIRFIFLATLRF--------DEELKIAIRTNICATQTVVKLAKQ 118 (125)
Q Consensus 81 ~~~~Vih~a~~~~~--------~~~~~~~~~~Nv~g~~~l~~~~~~ 118 (125)
..+++||+||.... .+.+...+++|+.|+..+.+.+.+
T Consensus 77 ~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 122 (243)
T PRK07023 77 SRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQ 122 (243)
T ss_pred CceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHH
Confidence 12699999997532 145677888999998887776543
No 191
>PRK06181 short chain dehydrogenase; Provisional
Probab=99.15 E-value=1e-10 Score=80.40 Aligned_cols=100 Identities=14% Similarity=0.137 Sum_probs=64.0
Q ss_pred CceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhh---ccCChhhhhhhhcCcc---------
Q psy897 13 DGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLD---NEGPIFKDFANLVRLK--------- 80 (125)
Q Consensus 13 ~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~l~~~~~l~--------- 80 (125)
+++++||||+|+||+++++.|++. +++|++++|+.... .....++.. .......|+.+...+.
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~---g~~Vi~~~r~~~~~--~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 75 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARA---GAQLVLAARNETRL--ASLAQELADHGGEALVVPTDVSDAEACERLIEAAVAR 75 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHC---CCEEEEEeCCHHHH--HHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 468999999999999999999988 78999999864321 111111111 0000112222211110
Q ss_pred --CCCeEEEeccccCcc--------hhHHHHhHhhHHHHHHHHHHHh
Q psy897 81 --TQRIRFIFLATLRFD--------EELKIAIRTNICATQTVVKLAK 117 (125)
Q Consensus 81 --~~~~Vih~a~~~~~~--------~~~~~~~~~Nv~g~~~l~~~~~ 117 (125)
..|+|||++|..... +.+...+++|+.++.++++.+.
T Consensus 76 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~ 122 (263)
T PRK06181 76 FGGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAAL 122 (263)
T ss_pred cCCCCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence 238999999975321 2355678899999999999874
No 192
>PRK07024 short chain dehydrogenase; Provisional
Probab=99.15 E-value=1.4e-10 Score=79.53 Aligned_cols=97 Identities=12% Similarity=0.094 Sum_probs=62.4
Q ss_pred CceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhh---ccCChhhhhhhhcCc----------
Q psy897 13 DGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLD---NEGPIFKDFANLVRL---------- 79 (125)
Q Consensus 13 ~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~l~~~~~l---------- 79 (125)
+|+++||||+|+||+++++.|++. |++|++++|+.... ....+... ....+..|+.+...+
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~---G~~v~~~~r~~~~~---~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~ 75 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQ---GATLGLVARRTDAL---QAFAARLPKAARVSVYAADVRDADALAAAAADFIAA 75 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHC---CCEEEEEeCCHHHH---HHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHh
Confidence 478999999999999999999998 79999999864321 11111110 000111122221111
Q ss_pred -cCCCeEEEeccccCc--------chhHHHHhHhhHHHHHHHHHH
Q psy897 80 -KTQRIRFIFLATLRF--------DEELKIAIRTNICATQTVVKL 115 (125)
Q Consensus 80 -~~~~~Vih~a~~~~~--------~~~~~~~~~~Nv~g~~~l~~~ 115 (125)
...|+|||+||.... .+.+...+++|+.|+.++++.
T Consensus 76 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~ 120 (257)
T PRK07024 76 HGLPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQP 120 (257)
T ss_pred CCCCCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHH
Confidence 024899999997521 135677889999999998773
No 193
>PRK07326 short chain dehydrogenase; Provisional
Probab=99.15 E-value=1.8e-10 Score=77.82 Aligned_cols=102 Identities=22% Similarity=0.256 Sum_probs=65.3
Q ss_pred CCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhh--hccCChhhhhhhhcCc----------
Q psy897 12 KDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKML--DNEGPIFKDFANLVRL---------- 79 (125)
Q Consensus 12 ~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~l---------- 79 (125)
.+++++||||+|++|+++++.|++. +++|++++|++... ......+. .....+..|+.+...+
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~---g~~V~~~~r~~~~~--~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAE---GYKVAITARDQKEL--EEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAA 79 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHC---CCEEEEeeCCHHHH--HHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 4689999999999999999999987 78999999865421 11111111 0000011122211110
Q ss_pred -cCCCeEEEeccccCc-------chhHHHHhHhhHHHHHHHHHHHhh
Q psy897 80 -KTQRIRFIFLATLRF-------DEELKIAIRTNICATQTVVKLAKQ 118 (125)
Q Consensus 80 -~~~~~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~~~ 118 (125)
...|+|||++|.... .+++...+++|+.++..+++++.+
T Consensus 80 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 126 (237)
T PRK07326 80 FGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVP 126 (237)
T ss_pred cCCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHH
Confidence 023799999987532 234667789999999999887653
No 194
>PRK07775 short chain dehydrogenase; Provisional
Probab=99.15 E-value=1.1e-10 Score=80.98 Aligned_cols=104 Identities=8% Similarity=0.032 Sum_probs=64.8
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCC-HHHHHHHhhhccCChhhhhhhhcCc----------
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVS-PQERIEKMLDNEGPIFKDFANLVRL---------- 79 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~l---------- 79 (125)
..+|+++||||+|+||++++++|++. |++|++.+|+..... ....+.........+..|+.+...+
T Consensus 8 ~~~~~vlVtGa~g~iG~~la~~L~~~---G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 84 (274)
T PRK07775 8 PDRRPALVAGASSGIGAATAIELAAA---GFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEA 84 (274)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC---CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHh
Confidence 34679999999999999999999998 789998888543211 1111111001000011122222111
Q ss_pred -cCCCeEEEeccccCcc-------hhHHHHhHhhHHHHHHHHHHHh
Q psy897 80 -KTQRIRFIFLATLRFD-------EELKIAIRTNICATQTVVKLAK 117 (125)
Q Consensus 80 -~~~~~Vih~a~~~~~~-------~~~~~~~~~Nv~g~~~l~~~~~ 117 (125)
...|+|||+||..... +.+...+++|+.++.++++.+.
T Consensus 85 ~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l 130 (274)
T PRK07775 85 LGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVL 130 (274)
T ss_pred cCCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence 1237999999985321 3456677899999999988764
No 195
>PRK05875 short chain dehydrogenase; Provisional
Probab=99.15 E-value=2e-10 Score=79.49 Aligned_cols=105 Identities=17% Similarity=0.176 Sum_probs=66.0
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCC-HHHHHHHhh--hccCChhhhhhhhcCcc-------
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVS-PQERIEKML--DNEGPIFKDFANLVRLK------- 80 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~-~~~~~~~~~--~~~~~~~~~l~~~~~l~------- 80 (125)
+++|+++|||++|+||+++++.|++. |++|++++|+..... ....+.... .....+..|+.+...+.
T Consensus 5 ~~~k~vlItGasg~IG~~la~~l~~~---G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 81 (276)
T PRK05875 5 FQDRTYLVTGGGSGIGKGVAAGLVAA---GAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAAT 81 (276)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC---CCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHH
Confidence 56799999999999999999999998 799999998654211 111111110 00000111222211110
Q ss_pred ----CCCeEEEeccccC----c----chhHHHHhHhhHHHHHHHHHHHhh
Q psy897 81 ----TQRIRFIFLATLR----F----DEELKIAIRTNICATQTVVKLAKQ 118 (125)
Q Consensus 81 ----~~~~Vih~a~~~~----~----~~~~~~~~~~Nv~g~~~l~~~~~~ 118 (125)
..|+|||+||... . .+.+...+++|+.++..+++++.+
T Consensus 82 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 131 (276)
T PRK05875 82 AWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAAR 131 (276)
T ss_pred HHcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 2389999999642 1 134667788999999999886543
No 196
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=99.15 E-value=1.2e-10 Score=79.55 Aligned_cols=101 Identities=15% Similarity=0.116 Sum_probs=63.5
Q ss_pred ceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCC-HHHHHHHhhhccCChhhhhhhhcCcc-----------C
Q psy897 14 GVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVS-PQERIEKMLDNEGPIFKDFANLVRLK-----------T 81 (125)
Q Consensus 14 ~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~l~-----------~ 81 (125)
|+++||||+|+||.++++.|++. |.+|++++|+..... ....+.........+..|+.+...+. .
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~---G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~ 77 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKD---GFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGG 77 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHC---CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 57999999999999999999998 789999988643111 11111110000011112332221111 2
Q ss_pred CCeEEEeccccCc-------chhHHHHhHhhHHHHHHHHHHHh
Q psy897 82 QRIRFIFLATLRF-------DEELKIAIRTNICATQTVVKLAK 117 (125)
Q Consensus 82 ~~~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~~ 117 (125)
.|+|||++|.... .++++..+++|+.++..+++++.
T Consensus 78 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 120 (254)
T TIGR02415 78 FDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAA 120 (254)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHH
Confidence 3799999997522 14567788999999998877654
No 197
>PRK06940 short chain dehydrogenase; Provisional
Probab=99.15 E-value=9.9e-11 Score=81.31 Aligned_cols=101 Identities=7% Similarity=0.037 Sum_probs=64.6
Q ss_pred CceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCC-HHHHHHHhhhccCChhhhhhhhcCc----------cC
Q psy897 13 DGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVS-PQERIEKMLDNEGPIFKDFANLVRL----------KT 81 (125)
Q Consensus 13 ~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~l----------~~ 81 (125)
+|.++|||+ |+||+++++.|. . |++|++++|+..... ..+.+.........+..|+.+...+ ..
T Consensus 2 ~k~~lItGa-~gIG~~la~~l~-~---G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~ 76 (275)
T PRK06940 2 KEVVVVIGA-GGIGQAIARRVG-A---GKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGP 76 (275)
T ss_pred CCEEEEECC-ChHHHHHHHHHh-C---CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCC
Confidence 468899998 799999999995 6 799999998654211 1111111000000011122221111 12
Q ss_pred CCeEEEeccccCcchhHHHHhHhhHHHHHHHHHHHhh
Q psy897 82 QRIRFIFLATLRFDEELKIAIRTNICATQTVVKLAKQ 118 (125)
Q Consensus 82 ~~~Vih~a~~~~~~~~~~~~~~~Nv~g~~~l~~~~~~ 118 (125)
.|+|||+||......++...+++|+.|+.++++++..
T Consensus 77 id~li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~ 113 (275)
T PRK06940 77 VTGLVHTAGVSPSQASPEAILKVDLYGTALVLEEFGK 113 (275)
T ss_pred CCEEEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHH
Confidence 3799999998755567888999999999999997654
No 198
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.15 E-value=1.7e-10 Score=85.17 Aligned_cols=103 Identities=13% Similarity=0.062 Sum_probs=67.3
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhccCChhhhhhhhcCc-----------
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDNEGPIFKDFANLVRL----------- 79 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l----------- 79 (125)
+++++++||||+|+||.++++.|.+. +.+|++++++...........+... ..+..|+.+...+
T Consensus 208 ~~g~~vlItGasggIG~~la~~l~~~---Ga~vi~~~~~~~~~~l~~~~~~~~~--~~~~~Dv~~~~~~~~~~~~~~~~~ 282 (450)
T PRK08261 208 LAGKVALVTGAARGIGAAIAEVLARD---GAHVVCLDVPAAGEALAAVANRVGG--TALALDITAPDAPARIAEHLAERH 282 (450)
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHC---CCEEEEEeCCccHHHHHHHHHHcCC--eEEEEeCCCHHHHHHHHHHHHHhC
Confidence 46799999999999999999999988 7999999885332111111111100 0111122111100
Q ss_pred cCCCeEEEeccccCc-------chhHHHHhHhhHHHHHHHHHHHhh
Q psy897 80 KTQRIRFIFLATLRF-------DEELKIAIRTNICATQTVVKLAKQ 118 (125)
Q Consensus 80 ~~~~~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~~~ 118 (125)
...|+|||+||.... .+.++..+++|+.|+.++.+++..
T Consensus 283 g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~ 328 (450)
T PRK08261 283 GGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLA 328 (450)
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 013899999997632 245778889999999999998765
No 199
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.15 E-value=1.5e-10 Score=79.30 Aligned_cols=105 Identities=12% Similarity=0.065 Sum_probs=65.1
Q ss_pred cCCceEEEecCcc--chhHHHHHHHHHhCCCccEEEEEecCCCCC--------CHHHHHHHhhh----ccCChhhhhhhh
Q psy897 11 YKDGVIFLTGGTG--FMGKVLLDTLLRRFPSIHSIYILVRERKGV--------SPQERIEKMLD----NEGPIFKDFANL 76 (125)
Q Consensus 11 ~~~~~vlitG~~G--~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~--------~~~~~~~~~~~----~~~~~~~~l~~~ 76 (125)
+++|+++||||+| +||.++++.|++. |++|++++|++... .....+..... ....+..|+.+.
T Consensus 3 l~~k~vlItGas~~~giG~~la~~l~~~---G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 79 (256)
T PRK12748 3 LMKKIALVTGASRLNGIGAAVCRRLAAK---GIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQP 79 (256)
T ss_pred CCCcEEEEeCCCCCCCHHHHHHHHHHHc---CCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCH
Confidence 3578999999995 7999999999998 78999998863211 00101111110 000111122221
Q ss_pred cCc-----------cCCCeEEEeccccCcc-------hhHHHHhHhhHHHHHHHHHHHhh
Q psy897 77 VRL-----------KTQRIRFIFLATLRFD-------EELKIAIRTNICATQTVVKLAKQ 118 (125)
Q Consensus 77 ~~l-----------~~~~~Vih~a~~~~~~-------~~~~~~~~~Nv~g~~~l~~~~~~ 118 (125)
..+ ...|+|||+||..... ++++..+++|+.++..+++++.+
T Consensus 80 ~~~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 139 (256)
T PRK12748 80 YAPNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAK 139 (256)
T ss_pred HHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 111 0237999999975221 34667789999999999987653
No 200
>KOG0747|consensus
Probab=99.15 E-value=1.9e-11 Score=84.11 Aligned_cols=113 Identities=20% Similarity=0.312 Sum_probs=75.1
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHh--hhccCChhhhhhhhcCcc------CC
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKM--LDNEGPIFKDFANLVRLK------TQ 82 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~l~------~~ 82 (125)
++.++++||||+||||++.+..+..++|+ .++++++.-.-... .....+. ..++..+.+++.+...+. ..
T Consensus 4 ~~~~~vlItgg~gfi~Sn~~~~~~~~~p~-~~~v~idkL~~~s~-~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~~~i 81 (331)
T KOG0747|consen 4 YKEKNVLITGGAGFIGSNFINYLVDKYPD-YKFVNLDKLDYCSN-LKNLEPVRNSPNYKFVEGDIADADLVLYLFETEEI 81 (331)
T ss_pred CccceEEEecCcCcchhhhhhhcccCCCC-CcEEEEeecccccc-cchhhhhccCCCceEeeccccchHHHHhhhccCch
Confidence 34589999999999999999999999876 67777654211000 1122221 111122223443321111 22
Q ss_pred CeEEEeccccCcch---hHHHHhHhhHHHHHHHHHHHhhCCCCcCC
Q psy897 83 RIRFIFLATLRFDE---ELKIAIRTNICATQTVVKLAKQCPHLRLF 125 (125)
Q Consensus 83 ~~Vih~a~~~~~~~---~~~~~~~~Nv~g~~~l~~~~~~~~~~~~~ 125 (125)
|.|+|.|+.+..+. ++-+..+.|+.++..|+++++..+++++|
T Consensus 82 d~vihfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~f 127 (331)
T KOG0747|consen 82 DTVIHFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRF 127 (331)
T ss_pred hhhhhhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEE
Confidence 69999999986553 44566689999999999999999999886
No 201
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=99.15 E-value=1.2e-10 Score=79.15 Aligned_cols=102 Identities=14% Similarity=0.091 Sum_probs=62.3
Q ss_pred CCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhcc-C--ChhhhhhhhcCc---------
Q psy897 12 KDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDNE-G--PIFKDFANLVRL--------- 79 (125)
Q Consensus 12 ~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~-~--~~~~~l~~~~~l--------- 79 (125)
++|+++||||+|+||+++++.|++. |+++++..+.... .......++.... . ....|+.+...+
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~~~---G~~vv~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 77 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLHKD---GFKVVAGCGPNSP-RRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKA 77 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHc---CCEEEEEcCCChH-HHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 5789999999999999999999998 7888775432211 1111112111100 0 001222221111
Q ss_pred --cCCCeEEEeccccCc-------chhHHHHhHhhHHHHHHHHHHHh
Q psy897 80 --KTQRIRFIFLATLRF-------DEELKIAIRTNICATQTVVKLAK 117 (125)
Q Consensus 80 --~~~~~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~~ 117 (125)
...|+|||+||.... .++++..+++|+.++..+++.+.
T Consensus 78 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 124 (246)
T PRK12938 78 EVGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVI 124 (246)
T ss_pred HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence 123899999998531 24567788999999888777553
No 202
>PRK06949 short chain dehydrogenase; Provisional
Probab=99.14 E-value=9.9e-11 Score=80.08 Aligned_cols=104 Identities=13% Similarity=0.095 Sum_probs=66.0
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCC-HHHHHHHhhhccCChhhhhhhhcCc----------
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVS-PQERIEKMLDNEGPIFKDFANLVRL---------- 79 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~l---------- 79 (125)
+.+|+++||||+|+||+++++.|++. +++|++++|+..... ....+.........+..|+.+...+
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~---G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQA---GAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETE 83 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC---CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHh
Confidence 56899999999999999999999998 789999988654211 1111110000000111122211111
Q ss_pred -cCCCeEEEeccccCc-------chhHHHHhHhhHHHHHHHHHHHh
Q psy897 80 -KTQRIRFIFLATLRF-------DEELKIAIRTNICATQTVVKLAK 117 (125)
Q Consensus 80 -~~~~~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~~ 117 (125)
...|+|||++|.... .+.++..+++|+.++..+++++.
T Consensus 84 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 129 (258)
T PRK06949 84 AGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVA 129 (258)
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHH
Confidence 023899999997421 24577788999999999988764
No 203
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.13 E-value=8.9e-11 Score=80.51 Aligned_cols=103 Identities=11% Similarity=0.063 Sum_probs=66.8
Q ss_pred ccCCceEEEecCc--cchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhc-cCChhhhhhhhcCcc------
Q psy897 10 FYKDGVIFLTGGT--GFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDN-EGPIFKDFANLVRLK------ 80 (125)
Q Consensus 10 ~~~~~~vlitG~~--G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~l~------ 80 (125)
.+++|+++||||+ +.||.+++++|++. |++|++.+|+.. ......++... ...+..|+.+...++
T Consensus 4 ~l~~k~~lItGas~~~gIG~a~a~~la~~---G~~Vi~~~r~~~---~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~ 77 (252)
T PRK06079 4 ILSGKKIVVMGVANKRSIAWGCAQAIKDQ---GATVIYTYQNDR---MKKSLQKLVDEEDLLVECDVASDESIERAFATI 77 (252)
T ss_pred ccCCCEEEEeCCCCCCchHHHHHHHHHHC---CCEEEEecCchH---HHHHHHhhccCceeEEeCCCCCHHHHHHHHHHH
Confidence 3578999999999 79999999999998 799999888622 12222222110 001111222211110
Q ss_pred -----CCCeEEEeccccCc-----------chhHHHHhHhhHHHHHHHHHHHhh
Q psy897 81 -----TQRIRFIFLATLRF-----------DEELKIAIRTNICATQTVVKLAKQ 118 (125)
Q Consensus 81 -----~~~~Vih~a~~~~~-----------~~~~~~~~~~Nv~g~~~l~~~~~~ 118 (125)
..|++||+||.... .++++..+++|+.++..+.+++..
T Consensus 78 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~ 131 (252)
T PRK06079 78 KERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARP 131 (252)
T ss_pred HHHhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHH
Confidence 23899999997421 145778889999999999887653
No 204
>KOG1201|consensus
Probab=99.13 E-value=3.7e-10 Score=78.35 Aligned_cols=101 Identities=16% Similarity=0.176 Sum_probs=67.4
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCC-CHHHHHHHhhhccCChhhhhhhhcC-----------
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGV-SPQERIEKMLDNEGPIFKDFANLVR----------- 78 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~----------- 78 (125)
.+|+.||||||++++|+.++.+++++ +..+.+.|.++... +..+.+.+.. ......-|+.+.++
T Consensus 36 v~g~~vLITGgg~GlGr~ialefa~r---g~~~vl~Din~~~~~etv~~~~~~g-~~~~y~cdis~~eei~~~a~~Vk~e 111 (300)
T KOG1201|consen 36 VSGEIVLITGGGSGLGRLIALEFAKR---GAKLVLWDINKQGNEETVKEIRKIG-EAKAYTCDISDREEIYRLAKKVKKE 111 (300)
T ss_pred ccCCEEEEeCCCchHHHHHHHHHHHh---CCeEEEEeccccchHHHHHHHHhcC-ceeEEEecCCCHHHHHHHHHHHHHh
Confidence 56899999999999999999999999 78888888876643 2223333221 10111122222211
Q ss_pred ccCCCeEEEeccccCc-------chhHHHHhHhhHHHHHHHHHH
Q psy897 79 LKTQRIRFIFLATLRF-------DEELKIAIRTNICATQTVVKL 115 (125)
Q Consensus 79 l~~~~~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~ 115 (125)
+...+++||+||+... ++..+..+++|+.|.+...++
T Consensus 112 ~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~ka 155 (300)
T KOG1201|consen 112 VGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKA 155 (300)
T ss_pred cCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHH
Confidence 1134699999999622 255677889999998877664
No 205
>PRK06484 short chain dehydrogenase; Validated
Probab=99.13 E-value=2.2e-10 Score=85.80 Aligned_cols=103 Identities=15% Similarity=0.212 Sum_probs=67.5
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhccCChhhhhhhhcCcc----------
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDNEGPIFKDFANLVRLK---------- 80 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~---------- 80 (125)
..+|+++||||+|+||.++++.|+++ |++|++++|+.... .............+..|+.+...+.
T Consensus 267 ~~~k~~lItGas~gIG~~~a~~l~~~---G~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 341 (520)
T PRK06484 267 ESPRVVAITGGARGIGRAVADRFAAA---GDRLLIIDRDAEGA--KKLAEALGDEHLSVQADITDEAAVESAFAQIQARW 341 (520)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHC---CCEEEEEeCCHHHH--HHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHc
Confidence 46899999999999999999999998 79999999864321 1111111110000112222211111
Q ss_pred -CCCeEEEeccccCc--------chhHHHHhHhhHHHHHHHHHHHhh
Q psy897 81 -TQRIRFIFLATLRF--------DEELKIAIRTNICATQTVVKLAKQ 118 (125)
Q Consensus 81 -~~~~Vih~a~~~~~--------~~~~~~~~~~Nv~g~~~l~~~~~~ 118 (125)
..|++||+||.... .+.++..+++|+.|+.++.+++..
T Consensus 342 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 388 (520)
T PRK06484 342 GRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAAR 388 (520)
T ss_pred CCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 23899999997521 145778889999999999987654
No 206
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.13 E-value=2.1e-10 Score=79.11 Aligned_cols=101 Identities=16% Similarity=0.052 Sum_probs=63.4
Q ss_pred cCCceEEEecC--ccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhc---cCChhhhhhhhcCcc-----
Q psy897 11 YKDGVIFLTGG--TGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDN---EGPIFKDFANLVRLK----- 80 (125)
Q Consensus 11 ~~~~~vlitG~--~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~l~~~~~l~----- 80 (125)
+++|+++|||| +++||++++++|++. |.+|++..|.... .+...++... ...+..|+.+..+++
T Consensus 4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~---G~~v~~~~~~~~~---~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~ 77 (261)
T PRK08690 4 LQGKKILITGMISERSIAYGIAKACREQ---GAELAFTYVVDKL---EERVRKMAAELDSELVFRCDVASDDEINQVFAD 77 (261)
T ss_pred cCCcEEEEECCCCCCcHHHHHHHHHHHC---CCEEEEEcCcHHH---HHHHHHHHhccCCceEEECCCCCHHHHHHHHHH
Confidence 57899999997 679999999999998 7999887664221 1122222110 011112222221111
Q ss_pred ------CCCeEEEeccccCc--------c----hhHHHHhHhhHHHHHHHHHHHh
Q psy897 81 ------TQRIRFIFLATLRF--------D----EELKIAIRTNICATQTVVKLAK 117 (125)
Q Consensus 81 ------~~~~Vih~a~~~~~--------~----~~~~~~~~~Nv~g~~~l~~~~~ 117 (125)
..|++|||||.... . +.++..+++|+.++..+.+.+.
T Consensus 78 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~ 132 (261)
T PRK08690 78 LGKHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAAR 132 (261)
T ss_pred HHHHhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHH
Confidence 23799999998531 1 2456677899999988887654
No 207
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.12 E-value=3.3e-10 Score=78.11 Aligned_cols=105 Identities=11% Similarity=-0.009 Sum_probs=64.9
Q ss_pred ccCCceEEEecC--ccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhccCChhhhhhhhcCcc-------
Q psy897 10 FYKDGVIFLTGG--TGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDNEGPIFKDFANLVRLK------- 80 (125)
Q Consensus 10 ~~~~~~vlitG~--~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~------- 80 (125)
++++|+++|||| ++.||.+++++|++. |++|++.+|.....+..+.+.+.......+..|+.++..++
T Consensus 3 ~l~~k~vlItGas~~~GIG~a~a~~l~~~---G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 79 (260)
T PRK06997 3 FLAGKRILITGLLSNRSIAYGIAKACKRE---GAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLG 79 (260)
T ss_pred ccCCcEEEEeCCCCCCcHHHHHHHHHHHC---CCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHH
Confidence 356899999996 679999999999998 79998876532111111111111110011112332221111
Q ss_pred ----CCCeEEEeccccCc------------chhHHHHhHhhHHHHHHHHHHHh
Q psy897 81 ----TQRIRFIFLATLRF------------DEELKIAIRTNICATQTVVKLAK 117 (125)
Q Consensus 81 ----~~~~Vih~a~~~~~------------~~~~~~~~~~Nv~g~~~l~~~~~ 117 (125)
..|++||+||.... .++|+..+++|+.++..+.+++-
T Consensus 80 ~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~l 132 (260)
T PRK06997 80 QHWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAAL 132 (260)
T ss_pred HHhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHH
Confidence 23799999997521 13577788999999999988754
No 208
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=99.12 E-value=2.6e-10 Score=78.35 Aligned_cols=101 Identities=14% Similarity=0.111 Sum_probs=62.2
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhh---ccCChhhhhhhhcCc--------
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLD---NEGPIFKDFANLVRL-------- 79 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~l~~~~~l-------- 79 (125)
+++|+++||||+|+||+++++.|++. ++++++..|..... ......++.. ....+..|+.+...+
T Consensus 5 ~~~k~~lItGa~~gIG~~ia~~l~~~---G~~vvi~~~~~~~~-~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~ 80 (261)
T PRK08936 5 LEGKVVVITGGSTGLGRAMAVRFGKE---KAKVVINYRSDEEE-ANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAV 80 (261)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHC---CCEEEEEeCCCHHH-HHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHH
Confidence 57899999999999999999999998 78888877743311 1111111111 000111122221111
Q ss_pred ---cCCCeEEEeccccCc-------chhHHHHhHhhHHHHHHHHHH
Q psy897 80 ---KTQRIRFIFLATLRF-------DEELKIAIRTNICATQTVVKL 115 (125)
Q Consensus 80 ---~~~~~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~ 115 (125)
...|++||+||.... .+.++..+++|+.++..+++.
T Consensus 81 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~ 126 (261)
T PRK08936 81 KEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSRE 126 (261)
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHH
Confidence 023799999997522 145667789999988776554
No 209
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.12 E-value=2.5e-10 Score=77.78 Aligned_cols=103 Identities=15% Similarity=0.135 Sum_probs=63.0
Q ss_pred CCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhh---ccCChhhhhhhhcC----------
Q psy897 12 KDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLD---NEGPIFKDFANLVR---------- 78 (125)
Q Consensus 12 ~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~l~~~~~---------- 78 (125)
++++++||||+|+||++++++|+++ ++++++..++... ........... .......|+.+...
T Consensus 5 ~~~~vlitGasg~iG~~l~~~l~~~---g~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 80 (252)
T PRK06077 5 KDKVVVVTGSGRGIGRAIAVRLAKE---GSLVVVNAKKRAE-EMNETLKMVKENGGEGIGVLADVSTREGCETLAKATID 80 (252)
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHC---CCEEEEEeCCChH-HHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHH
Confidence 5789999999999999999999998 7888776654321 11111111110 00000112221111
Q ss_pred -ccCCCeEEEeccccCc-------chhHHHHhHhhHHHHHHHHHHHhh
Q psy897 79 -LKTQRIRFIFLATLRF-------DEELKIAIRTNICATQTVVKLAKQ 118 (125)
Q Consensus 79 -l~~~~~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~~~ 118 (125)
+...|+|||+||.... .+.++..+++|+.++.++++++.+
T Consensus 81 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 128 (252)
T PRK06077 81 RYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAK 128 (252)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHH
Confidence 1123899999997421 123456778999999999987764
No 210
>PRK06953 short chain dehydrogenase; Provisional
Probab=99.12 E-value=3.5e-10 Score=76.04 Aligned_cols=98 Identities=9% Similarity=0.154 Sum_probs=64.8
Q ss_pred CceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhccCChhhhhhhhcC-------cc--CCC
Q psy897 13 DGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDNEGPIFKDFANLVR-------LK--TQR 83 (125)
Q Consensus 13 ~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-------l~--~~~ 83 (125)
+++++||||+|+||+++++.|++. |.+|++++|+.... +.+..... .....|+.+... +. ..|
T Consensus 1 ~~~vlvtG~sg~iG~~la~~L~~~---G~~v~~~~r~~~~~---~~~~~~~~--~~~~~D~~~~~~v~~~~~~~~~~~~d 72 (222)
T PRK06953 1 MKTVLIVGASRGIGREFVRQYRAD---GWRVIATARDAAAL---AALQALGA--EALALDVADPASVAGLAWKLDGEALD 72 (222)
T ss_pred CceEEEEcCCCchhHHHHHHHHhC---CCEEEEEECCHHHH---HHHHhccc--eEEEecCCCHHHHHHHHHHhcCCCCC
Confidence 368999999999999999999987 79999998864421 11211100 001111111110 11 238
Q ss_pred eEEEeccccC---------cchhHHHHhHhhHHHHHHHHHHHhh
Q psy897 84 IRFIFLATLR---------FDEELKIAIRTNICATQTVVKLAKQ 118 (125)
Q Consensus 84 ~Vih~a~~~~---------~~~~~~~~~~~Nv~g~~~l~~~~~~ 118 (125)
+|||++|... ..++++..+++|+.++.++++++.+
T Consensus 73 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 116 (222)
T PRK06953 73 AAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLP 116 (222)
T ss_pred EEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHH
Confidence 9999999851 1245777889999999999988754
No 211
>PRK05884 short chain dehydrogenase; Provisional
Probab=99.12 E-value=2.9e-10 Score=76.73 Aligned_cols=98 Identities=12% Similarity=0.134 Sum_probs=63.2
Q ss_pred ceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhccCChhhhhhhhcCcc--------CCCeE
Q psy897 14 GVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDNEGPIFKDFANLVRLK--------TQRIR 85 (125)
Q Consensus 14 ~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~--------~~~~V 85 (125)
|+++||||+|+||+++++.|+++ +++|++++|+..... ....+... ..+..|+.+...++ ..|++
T Consensus 1 m~vlItGas~giG~~ia~~l~~~---g~~v~~~~r~~~~~~--~~~~~~~~--~~~~~D~~~~~~v~~~~~~~~~~id~l 73 (223)
T PRK05884 1 VEVLVTGGDTDLGRTIAEGFRND---GHKVTLVGARRDDLE--VAAKELDV--DAIVCDNTDPASLEEARGLFPHHLDTI 73 (223)
T ss_pred CeEEEEeCCchHHHHHHHHHHHC---CCEEEEEeCCHHHHH--HHHHhccC--cEEecCCCCHHHHHHHHHHHhhcCcEE
Confidence 36999999999999999999998 799999988643211 11111100 11112222221111 13899
Q ss_pred EEecccc---------C---cchhHHHHhHhhHHHHHHHHHHHhh
Q psy897 86 FIFLATL---------R---FDEELKIAIRTNICATQTVVKLAKQ 118 (125)
Q Consensus 86 ih~a~~~---------~---~~~~~~~~~~~Nv~g~~~l~~~~~~ 118 (125)
||+||.. . ..+++...+++|+.++.++++++..
T Consensus 74 v~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~ 118 (223)
T PRK05884 74 VNVPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGD 118 (223)
T ss_pred EECCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998742 0 1245778889999999999997653
No 212
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.12 E-value=2.4e-10 Score=77.50 Aligned_cols=104 Identities=17% Similarity=0.175 Sum_probs=64.8
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEE-ecCCCCCC-HHHHHHHhhhccCChhhhhhhhcCc---------
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYIL-VRERKGVS-PQERIEKMLDNEGPIFKDFANLVRL--------- 79 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~-~r~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~l--------- 79 (125)
+.+|+++||||+|+||+++++.|++. +++++++ +|+..... ....+............|+.+...+
T Consensus 3 ~~~~~ilI~Gasg~iG~~la~~l~~~---g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 79 (247)
T PRK05565 3 LMGKVAIVTGASGGIGRAIAELLAKE---GAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVE 79 (247)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC---CCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 34789999999999999999999988 7899888 77644211 0111111000000011122221111
Q ss_pred --cCCCeEEEeccccCc-------chhHHHHhHhhHHHHHHHHHHHh
Q psy897 80 --KTQRIRFIFLATLRF-------DEELKIAIRTNICATQTVVKLAK 117 (125)
Q Consensus 80 --~~~~~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~~ 117 (125)
...|+|||++|.... .+.++..+++|+.++.++++.+.
T Consensus 80 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 126 (247)
T PRK05565 80 KFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYAL 126 (247)
T ss_pred HhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence 023899999998622 13467788899999999988765
No 213
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=99.11 E-value=1.2e-10 Score=74.75 Aligned_cols=103 Identities=19% Similarity=0.238 Sum_probs=64.9
Q ss_pred ceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhh---hccCChhhhhhhhcCcc----------
Q psy897 14 GVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKML---DNEGPIFKDFANLVRLK---------- 80 (125)
Q Consensus 14 ~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~l~---------- 80 (125)
|+++||||+|.||.++++.|+++ ++..|+++.|++......+...++. ........|+.+...++
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~--g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARR--GARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRF 78 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHT--TTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhc--CceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccc
Confidence 68999999999999999999998 4568888888711111111111111 10001111222111110
Q ss_pred -CCCeEEEeccccCc-------chhHHHHhHhhHHHHHHHHHHHhh
Q psy897 81 -TQRIRFIFLATLRF-------DEELKIAIRTNICATQTVVKLAKQ 118 (125)
Q Consensus 81 -~~~~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~~~ 118 (125)
..|++||++|.... .+.+...+++|+.+...+.+++..
T Consensus 79 ~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 124 (167)
T PF00106_consen 79 GPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLP 124 (167)
T ss_dssp SSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccchhhhhccccccceeeeeeehhee
Confidence 22799999999742 256778889999999999987654
No 214
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.11 E-value=3.4e-10 Score=78.21 Aligned_cols=102 Identities=14% Similarity=0.067 Sum_probs=65.3
Q ss_pred cCCceEEEecCcc--chhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhc---cCChhhhhhhhcCcc-----
Q psy897 11 YKDGVIFLTGGTG--FMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDN---EGPIFKDFANLVRLK----- 80 (125)
Q Consensus 11 ~~~~~vlitG~~G--~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~l~~~~~l~----- 80 (125)
+++|+++||||++ .||+++++.|++. |++|++.+|+.. ..+...++... ...+..|+.+...++
T Consensus 4 l~~k~~lITGas~~~GIG~aia~~la~~---G~~vil~~r~~~---~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~ 77 (262)
T PRK07984 4 LSGKRILVTGVASKLSIAYGIAQAMHRE---GAELAFTYQNDK---LKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAE 77 (262)
T ss_pred cCCCEEEEeCCCCCccHHHHHHHHHHHC---CCEEEEEecchh---HHHHHHHHHhccCCceEeecCCCCHHHHHHHHHH
Confidence 5689999999985 9999999999998 799988887521 11122222110 001112332221111
Q ss_pred ------CCCeEEEeccccCc------------chhHHHHhHhhHHHHHHHHHHHhh
Q psy897 81 ------TQRIRFIFLATLRF------------DEELKIAIRTNICATQTVVKLAKQ 118 (125)
Q Consensus 81 ------~~~~Vih~a~~~~~------------~~~~~~~~~~Nv~g~~~l~~~~~~ 118 (125)
..|++||+||.... .+.++..+++|+.|...+.+++..
T Consensus 78 ~~~~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 133 (262)
T PRK07984 78 LGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRS 133 (262)
T ss_pred HHhhcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHH
Confidence 23899999997421 135667788999999988887643
No 215
>PRK05650 short chain dehydrogenase; Provisional
Probab=99.11 E-value=2.3e-10 Score=79.03 Aligned_cols=100 Identities=11% Similarity=0.010 Sum_probs=61.8
Q ss_pred ceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCC-HHHHHHHhhhccCChhhhhhhhcCc-----------cC
Q psy897 14 GVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVS-PQERIEKMLDNEGPIFKDFANLVRL-----------KT 81 (125)
Q Consensus 14 ~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~l-----------~~ 81 (125)
|+++||||+|+||+++++.|++. |.+|++.+|+..... ....+.........+..|+.+...+ ..
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~---g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~ 77 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWARE---GWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGG 77 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHC---CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 47999999999999999999998 799999988654211 1111111100000011122211110 02
Q ss_pred CCeEEEeccccCc-------chhHHHHhHhhHHHHHHHHHHH
Q psy897 82 QRIRFIFLATLRF-------DEELKIAIRTNICATQTVVKLA 116 (125)
Q Consensus 82 ~~~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~ 116 (125)
.|+|||+||.... .++++..+++|+.++..+++.+
T Consensus 78 id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~ 119 (270)
T PRK05650 78 IDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAF 119 (270)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHH
Confidence 3799999998532 1456667889999988877754
No 216
>PRK05855 short chain dehydrogenase; Validated
Probab=99.10 E-value=2.2e-10 Score=86.26 Aligned_cols=103 Identities=11% Similarity=0.042 Sum_probs=66.6
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCC-HHHHHHHhhhccCChhhhhhhhcCcc---------
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVS-PQERIEKMLDNEGPIFKDFANLVRLK--------- 80 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~l~--------- 80 (125)
+.+++++||||+|+||++++++|+++ |++|++++|+..... ....+.........+..|+.+...+.
T Consensus 313 ~~~~~~lv~G~s~giG~~~a~~l~~~---G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 389 (582)
T PRK05855 313 FSGKLVVVTGAGSGIGRETALAFARE---GAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAE 389 (582)
T ss_pred CCCCEEEEECCcCHHHHHHHHHHHHC---CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHh
Confidence 56789999999999999999999998 799999998654211 11111111000001112222221110
Q ss_pred --CCCeEEEeccccCc-------chhHHHHhHhhHHHHHHHHHHH
Q psy897 81 --TQRIRFIFLATLRF-------DEELKIAIRTNICATQTVVKLA 116 (125)
Q Consensus 81 --~~~~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~ 116 (125)
..|+|||+||.... .+++...+++|+.|+.++++++
T Consensus 390 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~ 434 (582)
T PRK05855 390 HGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLF 434 (582)
T ss_pred cCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHH
Confidence 23899999998532 2467778899999999988864
No 217
>PRK07832 short chain dehydrogenase; Provisional
Probab=99.10 E-value=6.8e-10 Score=76.81 Aligned_cols=101 Identities=11% Similarity=0.146 Sum_probs=64.1
Q ss_pred ceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCC-HHHHHHHhhhccCC-hhhhhhhhcCc-----------c
Q psy897 14 GVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVS-PQERIEKMLDNEGP-IFKDFANLVRL-----------K 80 (125)
Q Consensus 14 ~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~-~~~~~~~~~~~~~~-~~~~l~~~~~l-----------~ 80 (125)
|+++||||+|+||.++++.|++. |+.|++++|+..... ....+......... ...|+.+...+ .
T Consensus 1 k~vlItGas~giG~~la~~la~~---G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 77 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQ---GAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHG 77 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHC---CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcC
Confidence 47999999999999999999988 789999888653211 11111111110000 11223221111 1
Q ss_pred CCCeEEEeccccCc-------chhHHHHhHhhHHHHHHHHHHHh
Q psy897 81 TQRIRFIFLATLRF-------DEELKIAIRTNICATQTVVKLAK 117 (125)
Q Consensus 81 ~~~~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~~ 117 (125)
..|+|||++|.... .++++..+++|+.|+.++++++.
T Consensus 78 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 121 (272)
T PRK07832 78 SMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFV 121 (272)
T ss_pred CCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 23899999997522 14567788999999999999764
No 218
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=99.10 E-value=3.1e-10 Score=75.05 Aligned_cols=101 Identities=15% Similarity=0.184 Sum_probs=64.2
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCC-HHHHHHHhhhccCC---------hhhhhhhhcCcc
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVS-PQERIEKMLDNEGP---------IFKDFANLVRLK 80 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~-~~~~~~~~~~~~~~---------~~~~l~~~~~l~ 80 (125)
++|.+||||||+++||.++++++.+. |..|+++.|+..... .+...+.+.....+ +.+.+..+ .+
T Consensus 3 ~tgnTiLITGG~sGIGl~lak~f~el---gN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~--~P 77 (245)
T COG3967 3 TTGNTILITGGASGIGLALAKRFLEL---GNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKE--YP 77 (245)
T ss_pred ccCcEEEEeCCcchhhHHHHHHHHHh---CCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhh--CC
Confidence 46889999999999999999999999 899999999765321 11111111110001 11111111 11
Q ss_pred CCCeEEEeccccC---cc------hhHHHHhHhhHHHHHHHHHHH
Q psy897 81 TQRIRFIFLATLR---FD------EELKIAIRTNICATQTVVKLA 116 (125)
Q Consensus 81 ~~~~Vih~a~~~~---~~------~~~~~~~~~Nv~g~~~l~~~~ 116 (125)
.-+++|||||+-+ +. ++....+.+|+.++.+|..+.
T Consensus 78 ~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~ 122 (245)
T COG3967 78 NLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALL 122 (245)
T ss_pred chheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHH
Confidence 2269999999852 11 234456679999999987754
No 219
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=99.09 E-value=6.7e-10 Score=76.47 Aligned_cols=104 Identities=13% Similarity=0.061 Sum_probs=65.9
Q ss_pred cCCceEEEecCc--cchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhc---cCChhhhhhhhcCcc-----
Q psy897 11 YKDGVIFLTGGT--GFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDN---EGPIFKDFANLVRLK----- 80 (125)
Q Consensus 11 ~~~~~vlitG~~--G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~l~~~~~l~----- 80 (125)
+++|+++||||+ +.||.+++++|++. |++|++..++.......+...++... ...+..|+.+...+.
T Consensus 4 l~~k~~lItGas~~~GIG~aia~~la~~---G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~ 80 (258)
T PRK07370 4 LTGKKALVTGIANNRSIAWGIAQQLHAA---GAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFET 80 (258)
T ss_pred cCCcEEEEeCCCCCCchHHHHHHHHHHC---CCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHH
Confidence 468999999986 89999999999998 79998876643321112222222110 011112332221111
Q ss_pred ------CCCeEEEeccccC-------c----chhHHHHhHhhHHHHHHHHHHHh
Q psy897 81 ------TQRIRFIFLATLR-------F----DEELKIAIRTNICATQTVVKLAK 117 (125)
Q Consensus 81 ------~~~~Vih~a~~~~-------~----~~~~~~~~~~Nv~g~~~l~~~~~ 117 (125)
..|++||+||... + .++++..+++|+.++..+.+++.
T Consensus 81 ~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~ 134 (258)
T PRK07370 81 IKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAK 134 (258)
T ss_pred HHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHH
Confidence 2379999999742 1 14577888999999999988654
No 220
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.09 E-value=2.9e-10 Score=76.84 Aligned_cols=98 Identities=14% Similarity=0.165 Sum_probs=64.8
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhccCCh---hhhhhhhcCccCCCeEEE
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDNEGPI---FKDFANLVRLKTQRIRFI 87 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~---~~~l~~~~~l~~~~~Vih 87 (125)
+++|+++||||+|+||+++++.|+++ +++|++++|+...... ..+. ... .++ .+.+.+. +...|+|||
T Consensus 3 l~~k~~lVtGas~~iG~~ia~~l~~~---G~~v~~~~r~~~~~~~-~~~~-~~~--~D~~~~~~~~~~~--~~~id~lv~ 73 (235)
T PRK06550 3 FMTKTVLITGAASGIGLAQARAFLAQ---GAQVYGVDKQDKPDLS-GNFH-FLQ--LDLSDDLEPLFDW--VPSVDILCN 73 (235)
T ss_pred CCCCEEEEcCCCchHHHHHHHHHHHC---CCEEEEEeCCcccccC-CcEE-EEE--CChHHHHHHHHHh--hCCCCEEEE
Confidence 45789999999999999999999998 7999999886542110 0000 000 111 1111111 112389999
Q ss_pred eccccC----c----chhHHHHhHhhHHHHHHHHHHHh
Q psy897 88 FLATLR----F----DEELKIAIRTNICATQTVVKLAK 117 (125)
Q Consensus 88 ~a~~~~----~----~~~~~~~~~~Nv~g~~~l~~~~~ 117 (125)
+||... . .+++...+++|+.++.++++++.
T Consensus 74 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 111 (235)
T PRK06550 74 TAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYL 111 (235)
T ss_pred CCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence 999641 1 14567788999999999998765
No 221
>PRK06198 short chain dehydrogenase; Provisional
Probab=99.09 E-value=3.1e-10 Score=77.76 Aligned_cols=105 Identities=14% Similarity=0.090 Sum_probs=65.6
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccE-EEEEecCCCCCC-HHHHHHHhhhccCChhhhhhhhcCc---------
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHS-IYILVRERKGVS-PQERIEKMLDNEGPIFKDFANLVRL--------- 79 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~-v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~l--------- 79 (125)
+++|+++||||+|+||+.+++.|++. +++ |++++|+..... ....+.........+..|+.+...+
T Consensus 4 ~~~k~vlItGa~g~iG~~la~~l~~~---G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 80 (260)
T PRK06198 4 LDGKVALVTGGTQGLGAAIARAFAER---GAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADE 80 (260)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHC---CCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence 56899999999999999999999988 677 899888643211 1111111000000011122211110
Q ss_pred --cCCCeEEEeccccCc-------chhHHHHhHhhHHHHHHHHHHHhh
Q psy897 80 --KTQRIRFIFLATLRF-------DEELKIAIRTNICATQTVVKLAKQ 118 (125)
Q Consensus 80 --~~~~~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~~~ 118 (125)
...|+|||++|.... .+.+...+++|+.++.++++++.+
T Consensus 81 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 128 (260)
T PRK06198 81 AFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIK 128 (260)
T ss_pred HhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 023899999997531 134667789999999999887643
No 222
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.08 E-value=4.9e-10 Score=76.38 Aligned_cols=102 Identities=10% Similarity=0.112 Sum_probs=62.6
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHH-hhhccCChhhhhhhhcCc----------
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEK-MLDNEGPIFKDFANLVRL---------- 79 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~l---------- 79 (125)
+++|+++||||+|+||+++++.|++. |++|++..+.... ..+.+.. .......+..|+.+...+
T Consensus 3 l~~k~ilItGas~gIG~~la~~l~~~---G~~vv~~~~~~~~--~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 77 (253)
T PRK08642 3 ISEQTVLVTGGSRGLGAAIARAFARE---GARVVVNYHQSED--AAEALADELGDRAIALQADVTDREQVQAMFATATEH 77 (253)
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHHHC---CCeEEEEcCCCHH--HHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 35689999999999999999999998 7888876553221 1111111 100000011122111100
Q ss_pred -cC-CCeEEEeccccC---------c----chhHHHHhHhhHHHHHHHHHHHh
Q psy897 80 -KT-QRIRFIFLATLR---------F----DEELKIAIRTNICATQTVVKLAK 117 (125)
Q Consensus 80 -~~-~~~Vih~a~~~~---------~----~~~~~~~~~~Nv~g~~~l~~~~~ 117 (125)
.. .|+|||+||... . .+++...+++|+.++.++++++.
T Consensus 78 ~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 130 (253)
T PRK08642 78 FGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAAL 130 (253)
T ss_pred hCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHH
Confidence 01 389999998521 1 13466788999999999999875
No 223
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.08 E-value=3.7e-10 Score=76.84 Aligned_cols=103 Identities=15% Similarity=0.121 Sum_probs=63.6
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCC-HHHHHHHhhhccCChhhhhhhhcCc----------
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVS-PQERIEKMLDNEGPIFKDFANLVRL---------- 79 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~l---------- 79 (125)
+++++++||||+|+||.++++.|+++ |++|++++|+..... ....+.........+..|+.+...+
T Consensus 3 ~~~~~~lItG~~g~iG~~~a~~l~~~---G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (253)
T PRK08217 3 LKDKVIVITGGAQGLGRAMAEYLAQK---GAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAED 79 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC---CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 46789999999999999999999998 789999988654211 1111111111000111122211110
Q ss_pred -cCCCeEEEeccccCc----------------chhHHHHhHhhHHHHHHHHHHH
Q psy897 80 -KTQRIRFIFLATLRF----------------DEELKIAIRTNICATQTVVKLA 116 (125)
Q Consensus 80 -~~~~~Vih~a~~~~~----------------~~~~~~~~~~Nv~g~~~l~~~~ 116 (125)
...|+|||++|.... .+.+...+++|+.++.++.+.+
T Consensus 80 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~ 133 (253)
T PRK08217 80 FGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREA 133 (253)
T ss_pred cCCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHH
Confidence 123899999996321 1345667789999998887643
No 224
>PRK08251 short chain dehydrogenase; Provisional
Probab=99.08 E-value=4.5e-10 Score=76.46 Aligned_cols=102 Identities=11% Similarity=0.022 Sum_probs=63.8
Q ss_pred CceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCC-HHHHHHHhh-h-ccCChhhhhhhhcCc----------
Q psy897 13 DGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVS-PQERIEKML-D-NEGPIFKDFANLVRL---------- 79 (125)
Q Consensus 13 ~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~-~~~~~~~~~-~-~~~~~~~~l~~~~~l---------- 79 (125)
+++++||||+|+||+++++.|++. +.+|++.+|++.... ....+.... . .......|+.+...+
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~---g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 78 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAK---GRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDE 78 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 578999999999999999999998 789999998654211 111111100 0 000011122221111
Q ss_pred -cCCCeEEEeccccCc-------chhHHHHhHhhHHHHHHHHHHHh
Q psy897 80 -KTQRIRFIFLATLRF-------DEELKIAIRTNICATQTVVKLAK 117 (125)
Q Consensus 80 -~~~~~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~~ 117 (125)
...|+|||+||.... .+.+...+++|+.++.++++++.
T Consensus 79 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 124 (248)
T PRK08251 79 LGGLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAM 124 (248)
T ss_pred cCCCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 123799999997522 13456678899999999988764
No 225
>PRK06123 short chain dehydrogenase; Provisional
Probab=99.07 E-value=4.5e-10 Score=76.41 Aligned_cols=102 Identities=12% Similarity=0.081 Sum_probs=61.9
Q ss_pred CceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhh---hccCChhhhhhhhcCcc---------
Q psy897 13 DGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKML---DNEGPIFKDFANLVRLK--------- 80 (125)
Q Consensus 13 ~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~l~--------- 80 (125)
+++++||||+|+||++++++|++. |+.|++..+.... ........+. .....+..|+.+...+.
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~---G~~vv~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 77 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAER---GYAVCLNYLRNRD-AAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRE 77 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHC---CCeEEEecCCCHH-HHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHH
Confidence 468999999999999999999998 7777776543221 1111111111 00001111222211111
Q ss_pred --CCCeEEEeccccCc--------chhHHHHhHhhHHHHHHHHHHHhh
Q psy897 81 --TQRIRFIFLATLRF--------DEELKIAIRTNICATQTVVKLAKQ 118 (125)
Q Consensus 81 --~~~~Vih~a~~~~~--------~~~~~~~~~~Nv~g~~~l~~~~~~ 118 (125)
..|+|||+||.... .+++...+++|+.++.++++++.+
T Consensus 78 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 125 (248)
T PRK06123 78 LGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVK 125 (248)
T ss_pred hCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 23799999997531 134667789999999999887643
No 226
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.07 E-value=6e-10 Score=76.79 Aligned_cols=102 Identities=8% Similarity=0.064 Sum_probs=65.6
Q ss_pred ccCCceEEEecCcc--chhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhc---cCChhhhhhhhcCcc----
Q psy897 10 FYKDGVIFLTGGTG--FMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDN---EGPIFKDFANLVRLK---- 80 (125)
Q Consensus 10 ~~~~~~vlitG~~G--~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~l~~~~~l~---- 80 (125)
.+++|+++||||++ +||.++++.|+++ |++|++.+|+.. ..+...++... ...+..|+.+..+++
T Consensus 5 ~~~~k~~lITGas~~~GIG~a~a~~la~~---G~~v~~~~r~~~---~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~ 78 (260)
T PRK06603 5 LLQGKKGLITGIANNMSISWAIAQLAKKH---GAELWFTYQSEV---LEKRVKPLAEEIGCNFVSELDVTNPKSISNLFD 78 (260)
T ss_pred ccCCcEEEEECCCCCcchHHHHHHHHHHc---CCEEEEEeCchH---HHHHHHHHHHhcCCceEEEccCCCHHHHHHHHH
Confidence 35689999999997 8999999999998 789988877532 11122222110 001112333222111
Q ss_pred -------CCCeEEEeccccC-------c----chhHHHHhHhhHHHHHHHHHHHh
Q psy897 81 -------TQRIRFIFLATLR-------F----DEELKIAIRTNICATQTVVKLAK 117 (125)
Q Consensus 81 -------~~~~Vih~a~~~~-------~----~~~~~~~~~~Nv~g~~~l~~~~~ 117 (125)
..|++||+||... . .+.+...+++|+.++..+++.+.
T Consensus 79 ~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~ 133 (260)
T PRK06603 79 DIKEKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAE 133 (260)
T ss_pred HHHHHcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2379999998642 1 14577888999999999988653
No 227
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=99.07 E-value=9e-10 Score=74.68 Aligned_cols=99 Identities=14% Similarity=0.041 Sum_probs=62.6
Q ss_pred ceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhh---ccCChhhhhhhhcCc-----------
Q psy897 14 GVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLD---NEGPIFKDFANLVRL----------- 79 (125)
Q Consensus 14 ~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~l~~~~~l----------- 79 (125)
|+++||||+|+||+++++.|+++ |++|++++|+... ........... ....+..|+.+...+
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~---g~~vi~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 78 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLND---GYRVIATYFSGND-CAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEE 78 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHc---CCEEEEEeCCcHH-HHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 68999999999999999999998 7999999887531 11111111110 000111122221111
Q ss_pred cCCCeEEEeccccCc-------chhHHHHhHhhHHHHHHHHHHH
Q psy897 80 KTQRIRFIFLATLRF-------DEELKIAIRTNICATQTVVKLA 116 (125)
Q Consensus 80 ~~~~~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~ 116 (125)
...|+|||++|.... .+.++..+++|+.++.++.+++
T Consensus 79 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~ 122 (245)
T PRK12824 79 GPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPL 122 (245)
T ss_pred CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHH
Confidence 023899999997521 2456778899999999986544
No 228
>PRK06484 short chain dehydrogenase; Validated
Probab=99.06 E-value=7.2e-10 Score=83.04 Aligned_cols=102 Identities=15% Similarity=0.175 Sum_probs=66.4
Q ss_pred CCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhccCChhhhhhhhcCc-----------c
Q psy897 12 KDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDNEGPIFKDFANLVRL-----------K 80 (125)
Q Consensus 12 ~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l-----------~ 80 (125)
++|+++||||+++||.++++.|++. |++|++++|+.... .+...++......+..|+.+...+ .
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~---G~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 78 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARA---GDQVVVADRNVERA--RERADSLGPDHHALAMDVSDEAQIREGFEQLHREFG 78 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHC---CCEEEEEeCCHHHH--HHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhC
Confidence 5799999999999999999999998 79999998865421 111111111000011122221111 0
Q ss_pred CCCeEEEeccccC---------cchhHHHHhHhhHHHHHHHHHHHhh
Q psy897 81 TQRIRFIFLATLR---------FDEELKIAIRTNICATQTVVKLAKQ 118 (125)
Q Consensus 81 ~~~~Vih~a~~~~---------~~~~~~~~~~~Nv~g~~~l~~~~~~ 118 (125)
..|+|||+||... ..++++..+++|+.++..+++++..
T Consensus 79 ~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 125 (520)
T PRK06484 79 RIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALR 125 (520)
T ss_pred CCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 2389999999731 1145778889999999999887653
No 229
>PRK06125 short chain dehydrogenase; Provisional
Probab=99.06 E-value=1.1e-09 Score=75.18 Aligned_cols=103 Identities=9% Similarity=0.080 Sum_probs=66.4
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCC-HHHHHHHhhh-ccCChhhhhhhhcCc-------cC
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVS-PQERIEKMLD-NEGPIFKDFANLVRL-------KT 81 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~-~~~~~~~~~~-~~~~~~~~l~~~~~l-------~~ 81 (125)
+++|+++|||++|+||.++++.|++. |.+|++++|+..... ..+.+..... .......|+.+...+ ..
T Consensus 5 ~~~k~vlItG~~~giG~~ia~~l~~~---G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~ 81 (259)
T PRK06125 5 LAGKRVLITGASKGIGAAAAEAFAAE---GCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGD 81 (259)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCC
Confidence 46899999999999999999999998 789999998654211 1111111101 000111122221111 12
Q ss_pred CCeEEEeccccCc-------chhHHHHhHhhHHHHHHHHHHH
Q psy897 82 QRIRFIFLATLRF-------DEELKIAIRTNICATQTVVKLA 116 (125)
Q Consensus 82 ~~~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~ 116 (125)
.|++||++|.... .+++...+++|+.+...+++++
T Consensus 82 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~ 123 (259)
T PRK06125 82 IDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLA 123 (259)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHH
Confidence 3799999997521 1467788899999999998865
No 230
>PRK07831 short chain dehydrogenase; Provisional
Probab=99.05 E-value=1.5e-09 Score=74.63 Aligned_cols=105 Identities=10% Similarity=0.086 Sum_probs=66.1
Q ss_pred ccCCceEEEecCcc-chhHHHHHHHHHhCCCccEEEEEecCCCCCC-HHHHHHH-hhh-ccCChhhhhhhhcCc------
Q psy897 10 FYKDGVIFLTGGTG-FMGKVLLDTLLRRFPSIHSIYILVRERKGVS-PQERIEK-MLD-NEGPIFKDFANLVRL------ 79 (125)
Q Consensus 10 ~~~~~~vlitG~~G-~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~-~~~~~~~-~~~-~~~~~~~~l~~~~~l------ 79 (125)
.+++++++||||+| .||+++++.|++. |++|++.+|+..... ....+.. ... ....+..|+.+...+
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~---G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 90 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEE---GARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDA 90 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHH
Confidence 45689999999997 7999999999998 789999887654211 1111111 000 000111122221111
Q ss_pred -----cCCCeEEEeccccCc-------chhHHHHhHhhHHHHHHHHHHHh
Q psy897 80 -----KTQRIRFIFLATLRF-------DEELKIAIRTNICATQTVVKLAK 117 (125)
Q Consensus 80 -----~~~~~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~~ 117 (125)
...|+|||+||.... .+.+...+++|+.++..+++++.
T Consensus 91 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 140 (262)
T PRK07831 91 AVERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAAL 140 (262)
T ss_pred HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence 023799999997421 14577788899999999888754
No 231
>PRK07578 short chain dehydrogenase; Provisional
Probab=99.05 E-value=4.7e-09 Score=69.43 Aligned_cols=88 Identities=15% Similarity=0.379 Sum_probs=60.9
Q ss_pred ceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCC----CCHHHHHHHhhhccCChhhhhhhhcCccCCCeEEEec
Q psy897 14 GVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKG----VSPQERIEKMLDNEGPIFKDFANLVRLKTQRIRFIFL 89 (125)
Q Consensus 14 ~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~----~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~Vih~a 89 (125)
|+++||||+|+||+++++.|.++ ++|++++|+... ....+.+..... .+ ..+ |+|||+|
T Consensus 1 ~~vlItGas~giG~~la~~l~~~----~~vi~~~r~~~~~~~D~~~~~~~~~~~~-------~~---~~i---d~lv~~a 63 (199)
T PRK07578 1 MKILVIGASGTIGRAVVAELSKR----HEVITAGRSSGDVQVDITDPASIRALFE-------KV---GKV---DAVVSAA 63 (199)
T ss_pred CeEEEEcCCcHHHHHHHHHHHhc----CcEEEEecCCCceEecCCChHHHHHHHH-------hc---CCC---CEEEECC
Confidence 47999999999999999999875 678888886531 111111222111 11 124 8999999
Q ss_pred cccCc-------chhHHHHhHhhHHHHHHHHHHHhh
Q psy897 90 ATLRF-------DEELKIAIRTNICATQTVVKLAKQ 118 (125)
Q Consensus 90 ~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~~~ 118 (125)
|...+ .+++...+++|+.++.++++++..
T Consensus 64 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 99 (199)
T PRK07578 64 GKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQH 99 (199)
T ss_pred CCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 97422 245777889999999999987654
No 232
>PRK07074 short chain dehydrogenase; Provisional
Probab=99.05 E-value=1.3e-09 Score=74.68 Aligned_cols=100 Identities=15% Similarity=0.140 Sum_probs=63.3
Q ss_pred CceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhh-ccCChhhhhhhhcCcc-----------
Q psy897 13 DGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLD-NEGPIFKDFANLVRLK----------- 80 (125)
Q Consensus 13 ~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~l~----------- 80 (125)
+++++||||+|+||.++++.|++. +++|++++|++... ......+.. ....+..|+.+...+.
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~---g~~v~~~~r~~~~~--~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 76 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAA---GDRVLALDIDAAAL--AAFADALGDARFVPVACDLTDAASLAAALANAAAERG 76 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHC---CCEEEEEeCCHHHH--HHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 578999999999999999999988 79999999865421 111111100 0001111222211110
Q ss_pred CCCeEEEeccccCc-------chhHHHHhHhhHHHHHHHHHHHh
Q psy897 81 TQRIRFIFLATLRF-------DEELKIAIRTNICATQTVVKLAK 117 (125)
Q Consensus 81 ~~~~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~~ 117 (125)
..|+|||++|.... .+.+...+++|+.++.++++++.
T Consensus 77 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 120 (257)
T PRK07074 77 PVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVL 120 (257)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence 13899999997522 13355567899999999988773
No 233
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.03 E-value=2.4e-09 Score=73.75 Aligned_cols=105 Identities=9% Similarity=-0.002 Sum_probs=65.1
Q ss_pred cCCceEEEecCc--cchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhh--ccCChhhhhhhhcCcc------
Q psy897 11 YKDGVIFLTGGT--GFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLD--NEGPIFKDFANLVRLK------ 80 (125)
Q Consensus 11 ~~~~~vlitG~~--G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~l~------ 80 (125)
+++|+++||||+ +.||.+++++|++. |++|++.+|........+.+.+... ....+..|+.+...++
T Consensus 5 ~~~k~~lItGa~~s~GIG~aia~~la~~---G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 81 (257)
T PRK08594 5 LEGKTYVVMGVANKRSIAWGIARSLHNA---GAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETI 81 (257)
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHC---CCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHH
Confidence 568999999997 89999999999998 7999988775322111112211111 0001112222221111
Q ss_pred -----CCCeEEEeccccCc--------c---hhHHHHhHhhHHHHHHHHHHHhh
Q psy897 81 -----TQRIRFIFLATLRF--------D---EELKIAIRTNICATQTVVKLAKQ 118 (125)
Q Consensus 81 -----~~~~Vih~a~~~~~--------~---~~~~~~~~~Nv~g~~~l~~~~~~ 118 (125)
..|++||+||.... + +.+...+++|+.++..+++++..
T Consensus 82 ~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 135 (257)
T PRK08594 82 KEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKK 135 (257)
T ss_pred HHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 23799999996421 1 34666778999999988876553
No 234
>PRK08303 short chain dehydrogenase; Provisional
Probab=99.02 E-value=1.2e-09 Score=77.14 Aligned_cols=104 Identities=13% Similarity=0.061 Sum_probs=64.4
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCC-------CCHHHHHHHhhhc----cCChhhhhhhhcCc
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKG-------VSPQERIEKMLDN----EGPIFKDFANLVRL 79 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~-------~~~~~~~~~~~~~----~~~~~~~l~~~~~l 79 (125)
+++|+++||||+++||.+++++|++. |.+|++.+|+... ....+...+.... ...+..|+.+..++
T Consensus 6 l~~k~~lITGgs~GIG~aia~~la~~---G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v 82 (305)
T PRK08303 6 LRGKVALVAGATRGAGRGIAVELGAA---GATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQV 82 (305)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC---CCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHH
Confidence 57899999999999999999999998 7999999886421 1111111111110 00111222222111
Q ss_pred c-----------CCCeEEEec-ccc-------Cc----chhHHHHhHhhHHHHHHHHHHHh
Q psy897 80 K-----------TQRIRFIFL-ATL-------RF----DEELKIAIRTNICATQTVVKLAK 117 (125)
Q Consensus 80 ~-----------~~~~Vih~a-~~~-------~~----~~~~~~~~~~Nv~g~~~l~~~~~ 117 (125)
+ ..|++||+| |.. .. .+.+...+++|+.+++.+.+++.
T Consensus 83 ~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l 143 (305)
T PRK08303 83 RALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFAL 143 (305)
T ss_pred HHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHH
Confidence 1 227999999 742 11 13466778899999998877654
No 235
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.02 E-value=2.3e-09 Score=73.61 Aligned_cols=104 Identities=18% Similarity=0.065 Sum_probs=62.6
Q ss_pred ccCCceEEEecCcc--chhHHHHHHHHHhCCCccEEEEEecCCC-----C---CCHHHHHHHhhh----ccCChhhhhhh
Q psy897 10 FYKDGVIFLTGGTG--FMGKVLLDTLLRRFPSIHSIYILVRERK-----G---VSPQERIEKMLD----NEGPIFKDFAN 75 (125)
Q Consensus 10 ~~~~~~vlitG~~G--~iG~~i~~~l~~~~~~~~~v~~~~r~~~-----~---~~~~~~~~~~~~----~~~~~~~~l~~ 75 (125)
.+++|+++||||+| +||+++++.|+++ |.+|++..+... . ........+... +...+..|+.+
T Consensus 3 ~l~~k~vlVtGas~~~giG~~~a~~l~~~---G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~ 79 (256)
T PRK12859 3 QLKNKVAVVTGVSRLDGIGAAICKELAEA---GADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQ 79 (256)
T ss_pred CcCCcEEEEECCCCCCChHHHHHHHHHHC---CCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCC
Confidence 46789999999995 8999999999998 788888754211 0 001111111111 00011122322
Q ss_pred hcCcc-----------CCCeEEEeccccCcc-------hhHHHHhHhhHHHHHHHHHHH
Q psy897 76 LVRLK-----------TQRIRFIFLATLRFD-------EELKIAIRTNICATQTVVKLA 116 (125)
Q Consensus 76 ~~~l~-----------~~~~Vih~a~~~~~~-------~~~~~~~~~Nv~g~~~l~~~~ 116 (125)
...+. ..|+|||+||..... +.++..+++|+.+...+.+++
T Consensus 80 ~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~ 138 (256)
T PRK12859 80 NDAPKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQF 138 (256)
T ss_pred HHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHH
Confidence 21111 238999999975221 356778899999999886543
No 236
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=99.01 E-value=1.2e-09 Score=74.35 Aligned_cols=100 Identities=13% Similarity=0.063 Sum_probs=58.7
Q ss_pred CceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCC-CC-HHHHHHHhhhccCChhhhhhhhcC-----------c
Q psy897 13 DGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKG-VS-PQERIEKMLDNEGPIFKDFANLVR-----------L 79 (125)
Q Consensus 13 ~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~-~~-~~~~~~~~~~~~~~~~~~l~~~~~-----------l 79 (125)
+|+++||||+|+||+++++.|++. +++|++..+.... .. ....+.........+..|+.+... +
T Consensus 2 ~k~ilItGas~giG~~la~~l~~~---g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 78 (248)
T PRK06947 2 RKVVLITGASRGIGRATAVLAAAR---GWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAF 78 (248)
T ss_pred CcEEEEeCCCCcHHHHHHHHHHHC---CCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhc
Confidence 368999999999999999999998 7888776543221 10 111111100000011112211110 1
Q ss_pred cCCCeEEEeccccCc--------chhHHHHhHhhHHHHHHHHHH
Q psy897 80 KTQRIRFIFLATLRF--------DEELKIAIRTNICATQTVVKL 115 (125)
Q Consensus 80 ~~~~~Vih~a~~~~~--------~~~~~~~~~~Nv~g~~~l~~~ 115 (125)
...|+|||+||.... .+++...+++|+.++..+++.
T Consensus 79 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~ 122 (248)
T PRK06947 79 GRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCARE 122 (248)
T ss_pred CCCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHH
Confidence 123899999997421 134566788999999888754
No 237
>PRK07201 short chain dehydrogenase; Provisional
Probab=99.01 E-value=8.2e-10 Score=84.75 Aligned_cols=103 Identities=8% Similarity=0.054 Sum_probs=65.5
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCC-HHHHHHHhhhccCChhhhhhhhcCcc---------
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVS-PQERIEKMLDNEGPIFKDFANLVRLK--------- 80 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~l~--------- 80 (125)
+++|+++||||+|+||+++++.|++. |++|++++|+..... ....+.........+..|+.+...++
T Consensus 369 ~~~k~vlItGas~giG~~la~~l~~~---G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 445 (657)
T PRK07201 369 LVGKVVLITGASSGIGRATAIKVAEA---GATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAE 445 (657)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC---CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHh
Confidence 56789999999999999999999998 799999998654211 11111110000000111222211110
Q ss_pred --CCCeEEEeccccCc---------chhHHHHhHhhHHHHHHHHHHH
Q psy897 81 --TQRIRFIFLATLRF---------DEELKIAIRTNICATQTVVKLA 116 (125)
Q Consensus 81 --~~~~Vih~a~~~~~---------~~~~~~~~~~Nv~g~~~l~~~~ 116 (125)
..|+|||+||.... .+++...+++|+.|+.++++++
T Consensus 446 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~ 492 (657)
T PRK07201 446 HGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGL 492 (657)
T ss_pred cCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 23899999997411 1356778899999999987765
No 238
>PLN02780 ketoreductase/ oxidoreductase
Probab=99.01 E-value=2.9e-09 Score=75.66 Aligned_cols=102 Identities=19% Similarity=0.179 Sum_probs=64.7
Q ss_pred CCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCC-HHHHHHHhhh--cc----CChh-------hhhhhhc
Q psy897 12 KDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVS-PQERIEKMLD--NE----GPIF-------KDFANLV 77 (125)
Q Consensus 12 ~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~-~~~~~~~~~~--~~----~~~~-------~~l~~~~ 77 (125)
.++.++||||+|+||++++++|+++ |.+|++++|++.... ..+.+..... .. .++. +++.+..
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~---G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~ 128 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARK---GLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETI 128 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHC---CCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHh
Confidence 3789999999999999999999998 799999999765321 1112211100 00 0010 1111110
Q ss_pred -CccCCCeEEEeccccC-----c----chhHHHHhHhhHHHHHHHHHHHh
Q psy897 78 -RLKTQRIRFIFLATLR-----F----DEELKIAIRTNICATQTVVKLAK 117 (125)
Q Consensus 78 -~l~~~~~Vih~a~~~~-----~----~~~~~~~~~~Nv~g~~~l~~~~~ 117 (125)
++ ..|++||+||... + .+.++..+++|+.|+..+.+++.
T Consensus 129 ~~~-didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l 177 (320)
T PLN02780 129 EGL-DVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVL 177 (320)
T ss_pred cCC-CccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHH
Confidence 11 1259999999752 1 13456788999999999988754
No 239
>PRK08324 short chain dehydrogenase; Validated
Probab=99.01 E-value=1.5e-09 Score=84.00 Aligned_cols=102 Identities=14% Similarity=0.085 Sum_probs=66.4
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhh--ccCChhhhhhhhcCc---------
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLD--NEGPIFKDFANLVRL--------- 79 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~l--------- 79 (125)
+.+|+++||||+|+||+++++.|++. |.+|++++|+..... .....+.. ....+..|+.+...+
T Consensus 420 l~gk~vLVTGasggIG~~la~~L~~~---Ga~Vvl~~r~~~~~~--~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~ 494 (681)
T PRK08324 420 LAGKVALVTGAAGGIGKATAKRLAAE---GACVVLADLDEEAAE--AAAAELGGPDRALGVACDVTDEAAVQAAFEEAAL 494 (681)
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHC---cCEEEEEeCCHHHHH--HHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 56799999999999999999999998 789999998754211 11111110 000011122111100
Q ss_pred --cCCCeEEEeccccCc-------chhHHHHhHhhHHHHHHHHHHHh
Q psy897 80 --KTQRIRFIFLATLRF-------DEELKIAIRTNICATQTVVKLAK 117 (125)
Q Consensus 80 --~~~~~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~~ 117 (125)
...|+|||+||.... .+.+...+++|+.|+.++++++.
T Consensus 495 ~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~ 541 (681)
T PRK08324 495 AFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAV 541 (681)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 013899999997522 24577888999999999987764
No 240
>PRK08219 short chain dehydrogenase; Provisional
Probab=99.01 E-value=2.9e-09 Score=71.42 Aligned_cols=97 Identities=13% Similarity=0.233 Sum_probs=59.4
Q ss_pred CceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhccCChhhhhhhhcCcc-------CCCeE
Q psy897 13 DGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDNEGPIFKDFANLVRLK-------TQRIR 85 (125)
Q Consensus 13 ~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~-------~~~~V 85 (125)
+|+++||||+|+||+++++.|+++ ++|++++|+.... ..+............|+.+...+. ..|+|
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~----~~V~~~~r~~~~~---~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~v 75 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT----HTLLLGGRPAERL---DELAAELPGATPFPVDLTDPEAIAAAVEQLGRLDVL 75 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh----CCEEEEeCCHHHH---HHHHHHhccceEEecCCCCHHHHHHHHHhcCCCCEE
Confidence 478999999999999999999875 6799999864321 111111110011122332221111 13899
Q ss_pred EEeccccCcc-------hhHHHHhHhhHHHHHHHHHHH
Q psy897 86 FIFLATLRFD-------EELKIAIRTNICATQTVVKLA 116 (125)
Q Consensus 86 ih~a~~~~~~-------~~~~~~~~~Nv~g~~~l~~~~ 116 (125)
||++|..... +.+...+++|+.++..+.+.+
T Consensus 76 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~ 113 (227)
T PRK08219 76 VHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLL 113 (227)
T ss_pred EECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHH
Confidence 9999985321 345667789999866655543
No 241
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=99.01 E-value=1e-09 Score=74.27 Aligned_cols=99 Identities=13% Similarity=0.103 Sum_probs=59.9
Q ss_pred ceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhh---ccCChhhhhhhhcCc-----------
Q psy897 14 GVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLD---NEGPIFKDFANLVRL----------- 79 (125)
Q Consensus 14 ~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~l~~~~~l----------- 79 (125)
|+++||||+|+||+++++.|++. |++++++.|.... .......+... ....+..|+.+...+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~---G~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 76 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKD---GYRVAANCGPNEE-RAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAEL 76 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHC---CCEEEEEeCCCHH-HHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 57999999999999999999998 7899888873221 11111111100 000111122211111
Q ss_pred cCCCeEEEeccccCc-------chhHHHHhHhhHHHHHHHHHHH
Q psy897 80 KTQRIRFIFLATLRF-------DEELKIAIRTNICATQTVVKLA 116 (125)
Q Consensus 80 ~~~~~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~ 116 (125)
...|+|||++|.... .+++...+++|+.++..+++.+
T Consensus 77 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~ 120 (242)
T TIGR01829 77 GPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPV 120 (242)
T ss_pred CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHH
Confidence 123899999997521 1356677889999988866654
No 242
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=99.01 E-value=7.1e-10 Score=78.46 Aligned_cols=99 Identities=11% Similarity=0.089 Sum_probs=62.6
Q ss_pred CceEEEecCccchhHHHHHHHHHhCCCc-cEEEEEecCCCCCCHHHHHHHhhh---ccCChhhhhhhhcCc---------
Q psy897 13 DGVIFLTGGTGFMGKVLLDTLLRRFPSI-HSIYILVRERKGVSPQERIEKMLD---NEGPIFKDFANLVRL--------- 79 (125)
Q Consensus 13 ~~~vlitG~~G~iG~~i~~~l~~~~~~~-~~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~l~~~~~l--------- 79 (125)
+++++||||+++||.++++.|++. | ++|++.+|+.... .+...++.. ....+..|+.+...+
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~---G~~~V~l~~r~~~~~--~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 77 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAAT---GEWHVIMACRDFLKA--EQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRE 77 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHc---CCCEEEEEeCCHHHH--HHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 579999999999999999999998 7 8999998865421 111111100 000011122211110
Q ss_pred --cCCCeEEEeccccCc--------chhHHHHhHhhHHHHHHHHHHH
Q psy897 80 --KTQRIRFIFLATLRF--------DEELKIAIRTNICATQTVVKLA 116 (125)
Q Consensus 80 --~~~~~Vih~a~~~~~--------~~~~~~~~~~Nv~g~~~l~~~~ 116 (125)
...|++||+||.... .+.++..+++|+.|++.+++.+
T Consensus 78 ~~~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~ 124 (314)
T TIGR01289 78 SGRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLL 124 (314)
T ss_pred hCCCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHH
Confidence 013799999997421 1456778899999998887654
No 243
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=99.01 E-value=1.1e-09 Score=74.98 Aligned_cols=103 Identities=15% Similarity=0.132 Sum_probs=64.5
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhccCChhhhhhhh-c----Cc-cCCCe
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDNEGPIFKDFANL-V----RL-KTQRI 84 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~----~l-~~~~~ 84 (125)
..+|+++||||+|+||+++++.|++. +++|+++.|++.... ..... ......+..|+.+. . .+ ...|+
T Consensus 15 ~~~~~ilItGasG~iG~~l~~~L~~~---g~~V~~~~R~~~~~~--~~~~~-~~~~~~~~~Dl~d~~~~l~~~~~~~~d~ 88 (251)
T PLN00141 15 VKTKTVFVAGATGRTGKRIVEQLLAK---GFAVKAGVRDVDKAK--TSLPQ-DPSLQIVRADVTEGSDKLVEAIGDDSDA 88 (251)
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHhC---CCEEEEEecCHHHHH--Hhccc-CCceEEEEeeCCCCHHHHHHHhhcCCCE
Confidence 45789999999999999999999998 799999988654211 01100 00001111122210 0 11 12379
Q ss_pred EEEeccccCcchhHHHHhHhhHHHHHHHHHHHhhCC
Q psy897 85 RFIFLATLRFDEELKIAIRTNICATQTVVKLAKQCP 120 (125)
Q Consensus 85 Vih~a~~~~~~~~~~~~~~~Nv~g~~~l~~~~~~~~ 120 (125)
|||++|..... ++...+++|..++.++++++++.+
T Consensus 89 vi~~~g~~~~~-~~~~~~~~n~~~~~~ll~a~~~~~ 123 (251)
T PLN00141 89 VICATGFRRSF-DPFAPWKVDNFGTVNLVEACRKAG 123 (251)
T ss_pred EEECCCCCcCC-CCCCceeeehHHHHHHHHHHHHcC
Confidence 99998875321 222335789999999999987653
No 244
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=99.01 E-value=1.1e-09 Score=74.42 Aligned_cols=98 Identities=13% Similarity=0.103 Sum_probs=59.4
Q ss_pred ceEEEecCccchhHHHHHHHHHhCCCccEEEEE-ecCCCCCCHHHHHHHhhh---ccCChhhhhhhhcCcc---------
Q psy897 14 GVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYIL-VRERKGVSPQERIEKMLD---NEGPIFKDFANLVRLK--------- 80 (125)
Q Consensus 14 ~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~-~r~~~~~~~~~~~~~~~~---~~~~~~~~l~~~~~l~--------- 80 (125)
++++||||+|+||+++++.|++. +++|++. .|+... ..+...+... ....+..|+.+...++
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~---g~~v~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~ 76 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQE---GYTVAVNYQQNLHA--AQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQH 76 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHC---CCEEEEEeCCChHH--HHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHh
Confidence 68999999999999999999998 7888764 443321 1111111110 0001112222211111
Q ss_pred --CCCeEEEeccccCc--------chhHHHHhHhhHHHHHHHHHHH
Q psy897 81 --TQRIRFIFLATLRF--------DEELKIAIRTNICATQTVVKLA 116 (125)
Q Consensus 81 --~~~~Vih~a~~~~~--------~~~~~~~~~~Nv~g~~~l~~~~ 116 (125)
..|+|||++|.... .+++...+++|+.++..+++++
T Consensus 77 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~ 122 (247)
T PRK09730 77 DEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREA 122 (247)
T ss_pred CCCCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHH
Confidence 23799999997421 1356678899999998887654
No 245
>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.
Probab=99.00 E-value=3.2e-09 Score=68.06 Aligned_cols=103 Identities=17% Similarity=0.189 Sum_probs=63.7
Q ss_pred ceEEEecCccchhHHHHHHHHHhCCCcc-EEEEEecCCCCCCHHHH-HHHhhh---ccCChhhhhhhhcCcc--------
Q psy897 14 GVIFLTGGTGFMGKVLLDTLLRRFPSIH-SIYILVRERKGVSPQER-IEKMLD---NEGPIFKDFANLVRLK-------- 80 (125)
Q Consensus 14 ~~vlitG~~G~iG~~i~~~l~~~~~~~~-~v~~~~r~~~~~~~~~~-~~~~~~---~~~~~~~~l~~~~~l~-------- 80 (125)
++++||||+|+||.++++.|++. +. .|++..|++........ +..... ....+..|+.+...+.
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~---g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 77 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAER---GARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPA 77 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHh---hCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 47899999999999999999987 54 67878886543321111 111100 0000111222111110
Q ss_pred ---CCCeEEEeccccCcc-------hhHHHHhHhhHHHHHHHHHHHhhC
Q psy897 81 ---TQRIRFIFLATLRFD-------EELKIAIRTNICATQTVVKLAKQC 119 (125)
Q Consensus 81 ---~~~~Vih~a~~~~~~-------~~~~~~~~~Nv~g~~~l~~~~~~~ 119 (125)
..|.|||++|..... +++...+++|+.++.++++++++.
T Consensus 78 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 126 (180)
T smart00822 78 RLGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDL 126 (180)
T ss_pred HcCCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccC
Confidence 127999999975221 456777899999999999988653
No 246
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=99.00 E-value=2.8e-09 Score=73.32 Aligned_cols=103 Identities=13% Similarity=0.053 Sum_probs=61.5
Q ss_pred ccCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhh----ccCChhhhhhhhcCcc-----
Q psy897 10 FYKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLD----NEGPIFKDFANLVRLK----- 80 (125)
Q Consensus 10 ~~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~~l~----- 80 (125)
.+++|+++||||+|+||++++++|++. |++|++..+.... .......++.. ....+..|+.+...++
T Consensus 5 ~l~~k~vlItGas~gIG~~ia~~l~~~---G~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 80 (260)
T PRK08416 5 EMKGKTLVISGGTRGIGKAIVYEFAQS---GVNIAFTYNSNVE-EANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKK 80 (260)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHC---CCEEEEEcCCCHH-HHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHH
Confidence 457899999999999999999999998 7888887653321 11111111110 0001111222211110
Q ss_pred ------CCCeEEEeccccC---------c----chhHHHHhHhhHHHHHHHHHHH
Q psy897 81 ------TQRIRFIFLATLR---------F----DEELKIAIRTNICATQTVVKLA 116 (125)
Q Consensus 81 ------~~~~Vih~a~~~~---------~----~~~~~~~~~~Nv~g~~~l~~~~ 116 (125)
..|++||+||... + .+.+...+++|+.+...+.+.+
T Consensus 81 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~ 135 (260)
T PRK08416 81 IDEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEA 135 (260)
T ss_pred HHHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHH
Confidence 2379999998531 1 1346667788998887776654
No 247
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=98.99 E-value=1.2e-09 Score=75.05 Aligned_cols=98 Identities=12% Similarity=0.119 Sum_probs=58.8
Q ss_pred ceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCC-HHHHHHHhhhccCChhhhhhhhcCc-----------cC
Q psy897 14 GVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVS-PQERIEKMLDNEGPIFKDFANLVRL-----------KT 81 (125)
Q Consensus 14 ~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~l-----------~~ 81 (125)
|+++||||+|+||++++++|+++ |++|++.+|++.... ..+.+... .....+..|+.+...+ ..
T Consensus 1 m~vlItGas~gIG~aia~~l~~~---G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~ 76 (259)
T PRK08340 1 MNVLVTASSRGIGFNVARELLKK---GARVVISSRNEENLEKALKELKEY-GEVYAVKADLSDKDDLKNLVKEAWELLGG 76 (259)
T ss_pred CeEEEEcCCcHHHHHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHhc-CCceEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence 57999999999999999999998 799999988654211 11111110 0000111122221111 12
Q ss_pred CCeEEEeccccC-----cc----hhHHHHhHhhHHHHHHHHHH
Q psy897 82 QRIRFIFLATLR-----FD----EELKIAIRTNICATQTVVKL 115 (125)
Q Consensus 82 ~~~Vih~a~~~~-----~~----~~~~~~~~~Nv~g~~~l~~~ 115 (125)
.|+|||+||... .. +++...+.+|+.++..+...
T Consensus 77 id~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~ 119 (259)
T PRK08340 77 IDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTL 119 (259)
T ss_pred CCEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHH
Confidence 379999999742 11 34555667888887666543
No 248
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=98.99 E-value=1e-09 Score=71.57 Aligned_cols=88 Identities=26% Similarity=0.323 Sum_probs=58.5
Q ss_pred EEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhccCChhhhhhhhcC----ccCCCeEEEeccc
Q psy897 16 IFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDNEGPIFKDFANLVR----LKTQRIRFIFLAT 91 (125)
Q Consensus 16 vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----l~~~~~Vih~a~~ 91 (125)
|+|+||||++|++++++|+++ +++|+++.|++... .+ ......+..|+.+... +...|+||++++.
T Consensus 1 I~V~GatG~vG~~l~~~L~~~---~~~V~~~~R~~~~~------~~-~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~ 70 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRR---GHEVTALVRSPSKA------ED-SPGVEIIQGDLFDPDSVKAALKGADAVIHAAGP 70 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHT---TSEEEEEESSGGGH------HH-CTTEEEEESCTTCHHHHHHHHTTSSEEEECCHS
T ss_pred eEEECCCChHHHHHHHHHHHC---CCEEEEEecCchhc------cc-ccccccceeeehhhhhhhhhhhhcchhhhhhhh
Confidence 799999999999999999999 79999999986621 11 1100111222222211 1133799999976
Q ss_pred cCcchhHHHHhHhhHHHHHHHHHHHhhCCCCcC
Q psy897 92 LRFDEELKIAIRTNICATQTVVKLAKQCPHLRL 124 (125)
Q Consensus 92 ~~~~~~~~~~~~~Nv~g~~~l~~~~~~~~~~~~ 124 (125)
... ....+.+++++|++.+ +++
T Consensus 71 ~~~----------~~~~~~~~~~a~~~~~-~~~ 92 (183)
T PF13460_consen 71 PPK----------DVDAAKNIIEAAKKAG-VKR 92 (183)
T ss_dssp TTT----------HHHHHHHHHHHHHHTT-SSE
T ss_pred hcc----------cccccccccccccccc-ccc
Confidence 543 1667788999988864 444
No 249
>PRK07069 short chain dehydrogenase; Validated
Probab=98.98 E-value=4.9e-09 Score=71.37 Aligned_cols=100 Identities=10% Similarity=0.184 Sum_probs=59.8
Q ss_pred eEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhcc--C---ChhhhhhhhcCcc---------
Q psy897 15 VIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDNE--G---PIFKDFANLVRLK--------- 80 (125)
Q Consensus 15 ~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~--~---~~~~~l~~~~~l~--------- 80 (125)
+++||||+|+||+++++.|+++ |++|++++|+... ........+.... . ....|+.+...+.
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~---G~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 76 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQ---GAKVFLTDINDAA-GLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADA 76 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHC---CCEEEEEeCCcch-HHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHH
Confidence 3899999999999999999998 7999999986321 1111111111100 0 0111332221111
Q ss_pred --CCCeEEEeccccCcc-------hhHHHHhHhhHH----HHHHHHHHHhh
Q psy897 81 --TQRIRFIFLATLRFD-------EELKIAIRTNIC----ATQTVVKLAKQ 118 (125)
Q Consensus 81 --~~~~Vih~a~~~~~~-------~~~~~~~~~Nv~----g~~~l~~~~~~ 118 (125)
..|+|||+||..... +++...+++|+. ++..+++.+++
T Consensus 77 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 127 (251)
T PRK07069 77 MGGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRA 127 (251)
T ss_pred cCCccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhh
Confidence 237999999986321 345667788988 55555665554
No 250
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=98.97 E-value=2.3e-09 Score=72.34 Aligned_cols=100 Identities=15% Similarity=0.125 Sum_probs=62.9
Q ss_pred EEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCC--CHHHHHHHhhhccCChhhhhhhhcCcc-----------CC
Q psy897 16 IFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGV--SPQERIEKMLDNEGPIFKDFANLVRLK-----------TQ 82 (125)
Q Consensus 16 vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~l~-----------~~ 82 (125)
++|||++|+||+++++.|+++ |++|++++|..... .....+............|+.+...++ ..
T Consensus 1 vlItG~~g~iG~~la~~l~~~---G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 77 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKE---GAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPI 77 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHC---CCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence 589999999999999999998 79999998865311 011111111000001111222211110 23
Q ss_pred CeEEEeccccCc-------chhHHHHhHhhHHHHHHHHHHHhh
Q psy897 83 RIRFIFLATLRF-------DEELKIAIRTNICATQTVVKLAKQ 118 (125)
Q Consensus 83 ~~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~~~ 118 (125)
|+|||++|.... .+.+...+++|+.++.++++.+..
T Consensus 78 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 120 (239)
T TIGR01830 78 DILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLR 120 (239)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 899999998532 145677888999999999998764
No 251
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=98.97 E-value=2.7e-09 Score=82.50 Aligned_cols=103 Identities=15% Similarity=0.091 Sum_probs=64.7
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCC-HHHHHHHhhh--ccCChhhhhhhhcCcc-------
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVS-PQERIEKMLD--NEGPIFKDFANLVRLK------- 80 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~-~~~~~~~~~~--~~~~~~~~l~~~~~l~------- 80 (125)
+++|+++||||+|+||++++++|++. |++|++++|+..... ....+..... ....+..|+.+...+.
T Consensus 412 l~gkvvLVTGasggIG~aiA~~La~~---Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~ 488 (676)
T TIGR02632 412 LARRVAFVTGGAGGIGRETARRLAAE---GAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVA 488 (676)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHhC---CCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 56899999999999999999999998 799999998654211 1111110000 0001112222211110
Q ss_pred ----CCCeEEEeccccCc-------chhHHHHhHhhHHHHHHHHHHH
Q psy897 81 ----TQRIRFIFLATLRF-------DEELKIAIRTNICATQTVVKLA 116 (125)
Q Consensus 81 ----~~~~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~ 116 (125)
..|+|||+||.... .+.+...+++|+.+.+.+.+.+
T Consensus 489 ~~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~a 535 (676)
T TIGR02632 489 LAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREA 535 (676)
T ss_pred HhcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 23899999997532 1456778889999988876543
No 252
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=98.97 E-value=6.1e-09 Score=71.88 Aligned_cols=100 Identities=10% Similarity=0.043 Sum_probs=61.2
Q ss_pred ceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhh----ccCChhhhhhhhcC-----------
Q psy897 14 GVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLD----NEGPIFKDFANLVR----------- 78 (125)
Q Consensus 14 ~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~~----------- 78 (125)
+.++||||+|+||++++++|+++ |.+|+++.|..... ......++.. ....+..|+.+...
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~---G~~V~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~ 77 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQE---GYRVVLHYHRSAAA-ASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDA 77 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhC---CCeEEEEcCCcHHH-HHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHH
Confidence 57999999999999999999998 79999876543211 1111111110 00001123322210
Q ss_pred ----ccCCCeEEEeccccCc------c------------hhHHHHhHhhHHHHHHHHHHHh
Q psy897 79 ----LKTQRIRFIFLATLRF------D------------EELKIAIRTNICATQTVVKLAK 117 (125)
Q Consensus 79 ----l~~~~~Vih~a~~~~~------~------------~~~~~~~~~Nv~g~~~l~~~~~ 117 (125)
....|+|||+||.... + ..+...+++|+.+++.+++++.
T Consensus 78 ~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~ 138 (267)
T TIGR02685 78 CFRAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFA 138 (267)
T ss_pred HHHccCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHH
Confidence 0123899999997421 1 1356778999999999988654
No 253
>PRK07904 short chain dehydrogenase; Provisional
Probab=98.96 E-value=3.9e-09 Score=72.49 Aligned_cols=105 Identities=12% Similarity=0.079 Sum_probs=61.6
Q ss_pred CCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCC-CC-HHHHHHHhhh-ccCChhhhhhhhcCc---------
Q psy897 12 KDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKG-VS-PQERIEKMLD-NEGPIFKDFANLVRL--------- 79 (125)
Q Consensus 12 ~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~-~~-~~~~~~~~~~-~~~~~~~~l~~~~~l--------- 79 (125)
++++++||||+|+||++++++|++. ++.+|++++|+++. .. ..+.+..... ....+..|+.+..++
T Consensus 7 ~~~~vlItGas~giG~~la~~l~~~--gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~ 84 (253)
T PRK07904 7 NPQTILLLGGTSEIGLAICERYLKN--APARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFA 84 (253)
T ss_pred CCcEEEEEcCCcHHHHHHHHHHHhc--CCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHh
Confidence 4689999999999999999999997 24899999987653 11 1112221110 000011122211110
Q ss_pred -cCCCeEEEeccccCcc-----h--hHHHHhHhhHHHHHHH----HHHHhh
Q psy897 80 -KTQRIRFIFLATLRFD-----E--ELKIAIRTNICATQTV----VKLAKQ 118 (125)
Q Consensus 80 -~~~~~Vih~a~~~~~~-----~--~~~~~~~~Nv~g~~~l----~~~~~~ 118 (125)
...|++||++|..... + +..+.+++|+.++..+ ++.+++
T Consensus 85 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~ 135 (253)
T PRK07904 85 GGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRA 135 (253)
T ss_pred cCCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHh
Confidence 0237899999885321 1 1224678999998875 445444
No 254
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.95 E-value=2.7e-09 Score=72.13 Aligned_cols=102 Identities=12% Similarity=0.069 Sum_probs=63.9
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHH-HHhhh--ccCChhhhhhhhcCcc-------
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERI-EKMLD--NEGPIFKDFANLVRLK------- 80 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~-~~~~~--~~~~~~~~l~~~~~l~------- 80 (125)
+.+++++||||+|+||+++++.|++. |++|++.+|++... ..+ ..... ....+..|+.+...++
T Consensus 3 ~~~~~vlItGa~g~iG~~~a~~l~~~---G~~V~~~~r~~~~~---~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 76 (238)
T PRK05786 3 LKGKKVAIIGVSEGLGYAVAYFALKE---GAQVCINSRNENKL---KRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAA 76 (238)
T ss_pred cCCcEEEEECCCchHHHHHHHHHHHC---CCEEEEEeCCHHHH---HHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHH
Confidence 35789999999999999999999998 79999999865421 112 11111 0011112222211110
Q ss_pred ----CCCeEEEeccccCc-----chhHHHHhHhhHHHHHHHHHHHhh
Q psy897 81 ----TQRIRFIFLATLRF-----DEELKIAIRTNICATQTVVKLAKQ 118 (125)
Q Consensus 81 ----~~~~Vih~a~~~~~-----~~~~~~~~~~Nv~g~~~l~~~~~~ 118 (125)
..|.++|++|.... .+.+...+++|+.+...+++.+..
T Consensus 77 ~~~~~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 123 (238)
T PRK05786 77 KVLNAIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLR 123 (238)
T ss_pred HHhCCCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHH
Confidence 12788999886421 134556678999998888886544
No 255
>KOG0725|consensus
Probab=98.94 E-value=6.2e-09 Score=72.40 Aligned_cols=104 Identities=16% Similarity=0.161 Sum_probs=68.5
Q ss_pred cccCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCC-HHHHHHHhhh---ccCChhhhhhhh--------
Q psy897 9 DFYKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVS-PQERIEKMLD---NEGPIFKDFANL-------- 76 (125)
Q Consensus 9 ~~~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~-~~~~~~~~~~---~~~~~~~~l~~~-------- 76 (125)
..+.+|.++|||++.+||++++..|++. |.+|++.+|...... ....+..... .......|++..
T Consensus 4 ~~l~gkvalVTG~s~GIG~aia~~la~~---Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~ 80 (270)
T KOG0725|consen 4 GRLAGKVALVTGGSSGIGKAIALLLAKA---GAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVE 80 (270)
T ss_pred ccCCCcEEEEECCCChHHHHHHHHHHHC---CCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHH
Confidence 4578999999999999999999999999 899999999766421 1111111000 000111122211
Q ss_pred ------c-CccCCCeEEEeccccCcc--------hhHHHHhHhhHHH-HHHHHHHHhh
Q psy897 77 ------V-RLKTQRIRFIFLATLRFD--------EELKIAIRTNICA-TQTVVKLAKQ 118 (125)
Q Consensus 77 ------~-~l~~~~~Vih~a~~~~~~--------~~~~~~~~~Nv~g-~~~l~~~~~~ 118 (125)
+ .+ |++||+||..... +.|+..+++|+.| .+.+.+++..
T Consensus 81 ~~~~~~~Gki---diLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~ 135 (270)
T KOG0725|consen 81 FAVEKFFGKI---DILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARP 135 (270)
T ss_pred HHHHHhCCCC---CEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHH
Confidence 1 23 7999999986321 5688899999995 6666666654
No 256
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=98.94 E-value=2.7e-09 Score=72.28 Aligned_cols=98 Identities=18% Similarity=0.175 Sum_probs=60.4
Q ss_pred EEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCC--CHHHHHHHhhhccCChhhhhhhhcCcc-----------CC
Q psy897 16 IFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGV--SPQERIEKMLDNEGPIFKDFANLVRLK-----------TQ 82 (125)
Q Consensus 16 vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~l~-----------~~ 82 (125)
++||||+|+||.++++.|+++ |.+|+++++..... .....+.........+..|+.+..++. ..
T Consensus 1 vlItGas~giG~~~a~~l~~~---G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 77 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAAD---GFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAY 77 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHC---CCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 589999999999999999998 78898887754311 011111111010001112222211110 12
Q ss_pred CeEEEeccccC-------cchhHHHHhHhhHHHHHHHHHHH
Q psy897 83 RIRFIFLATLR-------FDEELKIAIRTNICATQTVVKLA 116 (125)
Q Consensus 83 ~~Vih~a~~~~-------~~~~~~~~~~~Nv~g~~~l~~~~ 116 (125)
|++||++|... ..+++...+++|+.++.++++++
T Consensus 78 ~~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~ 118 (239)
T TIGR01831 78 YGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPC 118 (239)
T ss_pred CEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHH
Confidence 68999999742 12467778899999999998865
No 257
>PRK08017 oxidoreductase; Provisional
Probab=98.94 E-value=3.1e-09 Score=72.57 Aligned_cols=93 Identities=16% Similarity=0.138 Sum_probs=58.3
Q ss_pred ceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhccCChhhhhhhhc-------Cc-----cC
Q psy897 14 GVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDNEGPIFKDFANLV-------RL-----KT 81 (125)
Q Consensus 14 ~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-------~l-----~~ 81 (125)
++++||||+|+||+++++.|++. |++|++++|+..... ...+... ..+..|+.+.. .+ ..
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~---g~~v~~~~r~~~~~~---~~~~~~~--~~~~~D~~~~~~~~~~~~~i~~~~~~~ 74 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRR---GYRVLAACRKPDDVA---RMNSLGF--TGILLDLDDPESVERAADEVIALTDNR 74 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHC---CCEEEEEeCCHHHhH---HHHhCCC--eEEEeecCCHHHHHHHHHHHHHhcCCC
Confidence 58999999999999999999988 789999988654221 1111000 00111111100 00 01
Q ss_pred CCeEEEeccccCc-------chhHHHHhHhhHHHHHHHHH
Q psy897 82 QRIRFIFLATLRF-------DEELKIAIRTNICATQTVVK 114 (125)
Q Consensus 82 ~~~Vih~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~ 114 (125)
.+.++|++|.... .++++..+++|+.|+.++.+
T Consensus 75 ~~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~ 114 (256)
T PRK08017 75 LYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTM 114 (256)
T ss_pred CeEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHH
Confidence 2699999997531 13466788999999888643
No 258
>PRK08862 short chain dehydrogenase; Provisional
Probab=98.92 E-value=4.7e-09 Score=71.15 Aligned_cols=102 Identities=14% Similarity=0.189 Sum_probs=61.7
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCC-HHHHHHHhhhccC----C---------hhhhhhhh
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVS-PQERIEKMLDNEG----P---------IFKDFANL 76 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~-~~~~~~~~~~~~~----~---------~~~~l~~~ 76 (125)
+++|+++||||++.||.+++++|++. |.+|++.+|+..... ..+.+........ + .++.+...
T Consensus 3 ~~~k~~lVtGas~GIG~aia~~la~~---G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (227)
T PRK08862 3 IKSSIILITSAGSVLGRTISCHFARL---GATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQ 79 (227)
T ss_pred CCCeEEEEECCccHHHHHHHHHHHHC---CCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHH
Confidence 45799999999999999999999998 799999988654321 1111211111000 0 11111111
Q ss_pred cCccCCCeEEEeccccC----cc----hhHHHHhHhhHHHHHHHHHHH
Q psy897 77 VRLKTQRIRFIFLATLR----FD----EELKIAIRTNICATQTVVKLA 116 (125)
Q Consensus 77 ~~l~~~~~Vih~a~~~~----~~----~~~~~~~~~Nv~g~~~l~~~~ 116 (125)
++. ..|++||+||... +. +.+...+++|+.++..+.+.+
T Consensus 80 ~g~-~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (227)
T PRK08862 80 FNR-APDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVA 126 (227)
T ss_pred hCC-CCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHH
Confidence 110 2389999998531 11 345556778888888776543
No 259
>PLN00016 RNA-binding protein; Provisional
Probab=98.92 E-value=4.1e-09 Score=76.32 Aligned_cols=96 Identities=17% Similarity=0.303 Sum_probs=59.1
Q ss_pred CceEEEe----cCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHH-----HHHHHhhhc-cCChhhhhhhhc-Ccc-
Q psy897 13 DGVIFLT----GGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQ-----ERIEKMLDN-EGPIFKDFANLV-RLK- 80 (125)
Q Consensus 13 ~~~vlit----G~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~-----~~~~~~~~~-~~~~~~~l~~~~-~l~- 80 (125)
+++|+|| ||+||||++|++.|++. |++|++++|+....... ..+.++... ...+..|+.+.. .+.
T Consensus 52 ~~~VLVt~~~~GatG~iG~~lv~~L~~~---G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~~~~~ 128 (378)
T PLN00016 52 KKKVLIVNTNSGGHAFIGFYLAKELVKA---GHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPADVKSKVAG 128 (378)
T ss_pred cceEEEEeccCCCceeEhHHHHHHHHHC---CCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHHHHhhhcc
Confidence 5789999 99999999999999998 79999999976431100 011111110 012223333211 111
Q ss_pred -CCCeEEEeccccCcchhHHHHhHhhHHHHHHHHHHHhhCCCCcCC
Q psy897 81 -TQRIRFIFLATLRFDEELKIAIRTNICATQTVVKLAKQCPHLRLF 125 (125)
Q Consensus 81 -~~~~Vih~a~~~~~~~~~~~~~~~Nv~g~~~l~~~~~~~~~~~~~ 125 (125)
..|+|||+++. +..++.+++++|++.+ +++|
T Consensus 129 ~~~d~Vi~~~~~-------------~~~~~~~ll~aa~~~g-vkr~ 160 (378)
T PLN00016 129 AGFDVVYDNNGK-------------DLDEVEPVADWAKSPG-LKQF 160 (378)
T ss_pred CCccEEEeCCCC-------------CHHHHHHHHHHHHHcC-CCEE
Confidence 24799998763 2346778999988753 5543
No 260
>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]
Probab=98.92 E-value=6.3e-10 Score=76.85 Aligned_cols=105 Identities=15% Similarity=0.154 Sum_probs=72.3
Q ss_pred CceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHH-HHHHh--hhc--cCChhhhhhhhcCcc------C
Q psy897 13 DGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQE-RIEKM--LDN--EGPIFKDFANLVRLK------T 81 (125)
Q Consensus 13 ~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~-~~~~~--~~~--~~~~~~~l~~~~~l~------~ 81 (125)
+|+.||||-||+-|++|++-|++. |+.|+.+.|..+...... .+... ... ......|+.+...+. .
T Consensus 2 ~K~ALITGITGQDGsYLa~lLLek---GY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v~ 78 (345)
T COG1089 2 GKVALITGITGQDGSYLAELLLEK---GYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEVQ 78 (345)
T ss_pred CceEEEecccCCchHHHHHHHHhc---CcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhcC
Confidence 589999999999999999999999 899999988644332211 11110 010 011234555433222 5
Q ss_pred CCeEEEeccccCcc---hhHHHHhHhhHHHHHHHHHHHhhCC
Q psy897 82 QRIRFIFLATLRFD---EELKIAIRTNICATQTVVKLAKQCP 120 (125)
Q Consensus 82 ~~~Vih~a~~~~~~---~~~~~~~~~Nv~g~~~l~~~~~~~~ 120 (125)
+|-|+|+||++.+. +.|....+++-.|+.+|+++.+...
T Consensus 79 PdEIYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~ 120 (345)
T COG1089 79 PDEIYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILG 120 (345)
T ss_pred chhheeccccccccccccCcceeeeechhHHHHHHHHHHHhC
Confidence 67999999997443 3456677899999999999998754
No 261
>PRK06924 short chain dehydrogenase; Provisional
Probab=98.90 E-value=4.2e-09 Score=71.84 Aligned_cols=99 Identities=14% Similarity=0.131 Sum_probs=60.2
Q ss_pred ceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHH-hhhccCChhhhhhhhcCcc-----------C
Q psy897 14 GVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEK-MLDNEGPIFKDFANLVRLK-----------T 81 (125)
Q Consensus 14 ~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~l~-----------~ 81 (125)
|+++||||+|+||++|+++|+++ +++|++++|.+... ...+.. .......+..|+.+...++ .
T Consensus 2 k~vlItGasggiG~~ia~~l~~~---g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 76 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLLEK---GTHVISISRTENKE--LTKLAEQYNSNLTFHSLDLQDVHELETNFNEILSSIQE 76 (251)
T ss_pred cEEEEecCCchHHHHHHHHHHhc---CCEEEEEeCCchHH--HHHHHhccCCceEEEEecCCCHHHHHHHHHHHHHhcCc
Confidence 68999999999999999999998 78999999865311 111111 0000001111222111110 0
Q ss_pred --CC--eEEEeccccCc--------chhHHHHhHhhHHHHHHHHHHHh
Q psy897 82 --QR--IRFIFLATLRF--------DEELKIAIRTNICATQTVVKLAK 117 (125)
Q Consensus 82 --~~--~Vih~a~~~~~--------~~~~~~~~~~Nv~g~~~l~~~~~ 117 (125)
.+ ++||+||.... .+.+...+++|+.++..+++.+.
T Consensus 77 ~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 124 (251)
T PRK06924 77 DNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFM 124 (251)
T ss_pred ccCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHH
Confidence 01 78999987521 14567778899999877776543
No 262
>PRK09009 C factor cell-cell signaling protein; Provisional
Probab=98.90 E-value=4.1e-09 Score=71.27 Aligned_cols=97 Identities=18% Similarity=0.225 Sum_probs=58.6
Q ss_pred ceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhccCChhhhhhhhc-------CccCCCeEE
Q psy897 14 GVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDNEGPIFKDFANLV-------RLKTQRIRF 86 (125)
Q Consensus 14 ~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-------~l~~~~~Vi 86 (125)
|+++||||+|+||++++++|+++++ +..+....|+.........+ .+ +..|+.+.. .+...|+||
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~-~~~v~~~~~~~~~~~~~~~~-~~------~~~Dls~~~~~~~~~~~~~~id~li 72 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYP-DATVHATYRHHKPDFQHDNV-QW------HALDVTDEAEIKQLSEQFTQLDWLI 72 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCC-CCEEEEEccCCccccccCce-EE------EEecCCCHHHHHHHHHhcCCCCEEE
Confidence 5799999999999999999999832 25566555543321000000 00 011111111 111238999
Q ss_pred EeccccCcc-------------hhHHHHhHhhHHHHHHHHHHHhh
Q psy897 87 IFLATLRFD-------------EELKIAIRTNICATQTVVKLAKQ 118 (125)
Q Consensus 87 h~a~~~~~~-------------~~~~~~~~~Nv~g~~~l~~~~~~ 118 (125)
|+||..... +.+...+.+|+.++..+++.+..
T Consensus 73 ~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~ 117 (235)
T PRK09009 73 NCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTP 117 (235)
T ss_pred ECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHh
Confidence 999986310 23556778999999988886544
No 263
>PRK07041 short chain dehydrogenase; Provisional
Probab=98.89 E-value=2.7e-09 Score=71.87 Aligned_cols=96 Identities=14% Similarity=0.101 Sum_probs=61.5
Q ss_pred EEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHh--hhccCChhhhhhhhcCcc-------CCCeEEE
Q psy897 17 FLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKM--LDNEGPIFKDFANLVRLK-------TQRIRFI 87 (125)
Q Consensus 17 litG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~l~-------~~~~Vih 87 (125)
+||||+|+||+++++.|++. |++|++++|++... ....... ......+..|+.+...+. ..|++||
T Consensus 1 lItGas~~iG~~~a~~l~~~---G~~v~~~~r~~~~~--~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~ 75 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAE---GARVTIASRSRDRL--AAAARALGGGAPVRTAALDITDEAAVDAFFAEAGPFDHVVI 75 (230)
T ss_pred CeecCCChHHHHHHHHHHHC---CCEEEEEeCCHHHH--HHHHHHHhcCCceEEEEccCCCHHHHHHHHHhcCCCCEEEE
Confidence 59999999999999999998 79999999864321 1111111 010011112333221111 2379999
Q ss_pred eccccCc-------chhHHHHhHhhHHHHHHHHHHHh
Q psy897 88 FLATLRF-------DEELKIAIRTNICATQTVVKLAK 117 (125)
Q Consensus 88 ~a~~~~~-------~~~~~~~~~~Nv~g~~~l~~~~~ 117 (125)
++|.... .+++...+++|+.++.+++++..
T Consensus 76 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 112 (230)
T PRK07041 76 TAADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAAR 112 (230)
T ss_pred CCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhh
Confidence 9997521 24577788999999999998543
No 264
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=98.85 E-value=3.3e-08 Score=69.82 Aligned_cols=35 Identities=14% Similarity=0.091 Sum_probs=31.5
Q ss_pred cCCceEEEecC--ccchhHHHHHHHHHhCCCccEEEEEecC
Q psy897 11 YKDGVIFLTGG--TGFMGKVLLDTLLRRFPSIHSIYILVRE 49 (125)
Q Consensus 11 ~~~~~vlitG~--~G~iG~~i~~~l~~~~~~~~~v~~~~r~ 49 (125)
+++|+++|||| +++||.++++.|++. |.+|++ .|.
T Consensus 7 l~gk~alITGa~~s~GIG~a~A~~la~~---Ga~Vv~-~~~ 43 (303)
T PLN02730 7 LRGKRAFIAGVADDNGYGWAIAKALAAA---GAEILV-GTW 43 (303)
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHHHC---CCEEEE-EeC
Confidence 67999999999 799999999999998 899988 543
No 265
>KOG1208|consensus
Probab=98.84 E-value=7.3e-09 Score=73.39 Aligned_cols=101 Identities=19% Similarity=0.195 Sum_probs=66.3
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCC-CCHHHHHHHhhhccCC---hhhhhhhhcCcc------
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKG-VSPQERIEKMLDNEGP---IFKDFANLVRLK------ 80 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~-~~~~~~~~~~~~~~~~---~~~~l~~~~~l~------ 80 (125)
+.+++++|||+|++||.+++++|+.+ |.+|+...|+... ....+.+..-... .. ..-|+.+...+.
T Consensus 33 ~~~~~~vVTGansGIG~eta~~La~~---Ga~Vv~~~R~~~~~~~~~~~i~~~~~~-~~i~~~~lDLssl~SV~~fa~~~ 108 (314)
T KOG1208|consen 33 LSGKVALVTGATSGIGFETARELALR---GAHVVLACRNEERGEEAKEQIQKGKAN-QKIRVIQLDLSSLKSVRKFAEEF 108 (314)
T ss_pred CCCcEEEEECCCCchHHHHHHHHHhC---CCEEEEEeCCHHHHHHHHHHHHhcCCC-CceEEEECCCCCHHHHHHHHHHH
Confidence 56789999999999999999999999 7999999998642 2222233220010 11 111222211110
Q ss_pred -----CCCeEEEeccccCc----c-hhHHHHhHhhHHHHHHHHHH
Q psy897 81 -----TQRIRFIFLATLRF----D-EELKIAIRTNICATQTVVKL 115 (125)
Q Consensus 81 -----~~~~Vih~a~~~~~----~-~~~~~~~~~Nv~g~~~l~~~ 115 (125)
.-|++||+||+... . +..+..+.+|..|.+.|.+.
T Consensus 109 ~~~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~l 153 (314)
T KOG1208|consen 109 KKKEGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTEL 153 (314)
T ss_pred HhcCCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHH
Confidence 22699999999622 2 45778889999998887654
No 266
>PLN00015 protochlorophyllide reductase
Probab=98.80 E-value=6.8e-09 Score=73.24 Aligned_cols=96 Identities=13% Similarity=0.096 Sum_probs=59.5
Q ss_pred EEecCccchhHHHHHHHHHhCCCc-cEEEEEecCCCCCCHHHHHHHhhh---ccCChhhhhhhhcCcc-----------C
Q psy897 17 FLTGGTGFMGKVLLDTLLRRFPSI-HSIYILVRERKGVSPQERIEKMLD---NEGPIFKDFANLVRLK-----------T 81 (125)
Q Consensus 17 litG~~G~iG~~i~~~l~~~~~~~-~~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~l~~~~~l~-----------~ 81 (125)
+||||+++||.+++++|++. | ++|++.+|+.... .....++.. ....+..|+.+...++ .
T Consensus 1 lITGas~GIG~aia~~l~~~---G~~~V~~~~r~~~~~--~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~ 75 (308)
T PLN00015 1 IITGASSGLGLATAKALAET---GKWHVVMACRDFLKA--ERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRP 75 (308)
T ss_pred CEeCCCChHHHHHHHHHHHC---CCCEEEEEeCCHHHH--HHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCC
Confidence 59999999999999999998 7 8999988864321 111111100 0000111222211110 2
Q ss_pred CCeEEEeccccC----c----chhHHHHhHhhHHHHHHHHHHHh
Q psy897 82 QRIRFIFLATLR----F----DEELKIAIRTNICATQTVVKLAK 117 (125)
Q Consensus 82 ~~~Vih~a~~~~----~----~~~~~~~~~~Nv~g~~~l~~~~~ 117 (125)
.|++||+||... . .+.++..+++|+.|++.+++.+.
T Consensus 76 iD~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l 119 (308)
T PLN00015 76 LDVLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLL 119 (308)
T ss_pred CCEEEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 379999999742 1 14677888999999888876543
No 267
>KOG4169|consensus
Probab=98.79 E-value=5.1e-09 Score=70.32 Aligned_cols=97 Identities=19% Similarity=0.229 Sum_probs=62.8
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhccCChh--hhhhhhcCcc--------
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDNEGPIF--KDFANLVRLK-------- 80 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~--~~l~~~~~l~-------- 80 (125)
++||.+++|||.|+||.+.+++|+++ +..+.+++.+....+...+++...+....+| -|+.+..+++
T Consensus 3 ~tGKna~vtggagGIGl~~sk~Ll~k---gik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~ 79 (261)
T KOG4169|consen 3 LTGKNALVTGGAGGIGLATSKALLEK---GIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILA 79 (261)
T ss_pred ccCceEEEecCCchhhHHHHHHHHHc---CchheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHH
Confidence 46999999999999999999999998 5655555544443344444544433211111 1111111111
Q ss_pred ---CCCeEEEeccccCcchhHHHHhHhhHHHHHH
Q psy897 81 ---TQRIRFIFLATLRFDEELKIAIRTNICATQT 111 (125)
Q Consensus 81 ---~~~~Vih~a~~~~~~~~~~~~~~~Nv~g~~~ 111 (125)
..|++||.||+.+ +.+++..+.+|+.|..+
T Consensus 80 ~fg~iDIlINgAGi~~-dkd~e~Ti~vNLtgvin 112 (261)
T KOG4169|consen 80 TFGTIDILINGAGILD-DKDWERTINVNLTGVIN 112 (261)
T ss_pred HhCceEEEEccccccc-chhHHHhhccchhhhhh
Confidence 2379999999987 55789999999776444
No 268
>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
Probab=98.79 E-value=5.6e-08 Score=66.27 Aligned_cols=103 Identities=14% Similarity=0.175 Sum_probs=65.3
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhh-----ccCChhhhhhh-hcCcc----
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLD-----NEGPIFKDFAN-LVRLK---- 80 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~l~~-~~~l~---- 80 (125)
+++|+++||||+++||.++++.|++. |+.+++..+..... ..+....... .......|+.+ ...+.
T Consensus 3 ~~~~~ilITGas~GiG~aia~~l~~~---G~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~ 78 (251)
T COG1028 3 LSGKVALVTGASSGIGRAIARALARE---GARVVVAARRSEEE-AAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVA 78 (251)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC---CCeEEEEcCCCchh-hHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHH
Confidence 45799999999999999999999977 78988877765431 1111111111 00011123332 11111
Q ss_pred -------CCCeEEEeccccCc--------chhHHHHhHhhHHHHHHHHHHHh
Q psy897 81 -------TQRIRFIFLATLRF--------DEELKIAIRTNICATQTVVKLAK 117 (125)
Q Consensus 81 -------~~~~Vih~a~~~~~--------~~~~~~~~~~Nv~g~~~l~~~~~ 117 (125)
..|++||+||.... .+.++..+++|+.|...+.+++.
T Consensus 79 ~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~ 130 (251)
T COG1028 79 AAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAAL 130 (251)
T ss_pred HHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHH
Confidence 13699999998521 15678888999999999888544
No 269
>KOG1207|consensus
Probab=98.77 E-value=9.3e-10 Score=71.29 Aligned_cols=102 Identities=15% Similarity=0.155 Sum_probs=70.9
Q ss_pred cccCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhc-cCChhhhhhhhcCcc-------
Q psy897 9 DFYKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDN-EGPIFKDFANLVRLK------- 80 (125)
Q Consensus 9 ~~~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~l~------- 80 (125)
..+.|+.+++||+.-+||+.++..|.+. |.+|+.+.|.+.... ....+ ... -.|+..|+...+.+.
T Consensus 3 t~laG~~vlvTgagaGIG~~~v~~La~a---GA~ViAvaR~~a~L~--sLV~e-~p~~I~Pi~~Dls~wea~~~~l~~v~ 76 (245)
T KOG1207|consen 3 TSLAGVIVLVTGAGAGIGKEIVLSLAKA---GAQVIAVARNEANLL--SLVKE-TPSLIIPIVGDLSAWEALFKLLVPVF 76 (245)
T ss_pred ccccceEEEeecccccccHHHHHHHHhc---CCEEEEEecCHHHHH--HHHhh-CCcceeeeEecccHHHHHHHhhcccC
Confidence 4567999999999999999999999999 899999999766321 11111 110 123444444432111
Q ss_pred CCCeEEEeccccC---c----chhHHHHhHhhHHHHHHHHHHH
Q psy897 81 TQRIRFIFLATLR---F----DEELKIAIRTNICATQTVVKLA 116 (125)
Q Consensus 81 ~~~~Vih~a~~~~---~----~~~~~~~~~~Nv~g~~~l~~~~ 116 (125)
..|.++|+||..- + .++++..+++|+.+..++.+..
T Consensus 77 pidgLVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~v 119 (245)
T KOG1207|consen 77 PIDGLVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLV 119 (245)
T ss_pred chhhhhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHH
Confidence 3378999999862 2 2567788899999988888763
No 270
>KOG2865|consensus
Probab=98.76 E-value=1.2e-08 Score=70.75 Aligned_cols=109 Identities=12% Similarity=0.120 Sum_probs=72.0
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCC-CHHHHHHHhhhccCChhhhhhhhcCcc----CCCeE
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGV-SPQERIEKMLDNEGPIFKDFANLVRLK----TQRIR 85 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~l~----~~~~V 85 (125)
++|-.+-|.|||||+|.+++.+|.+. |.+|++.-|..+.. ...+.+.++.+ .....-+++++.++. -.++|
T Consensus 59 ~sGiVaTVFGAtGFlGryvvnklak~---GSQviiPyR~d~~~~r~lkvmGdLGQ-vl~~~fd~~DedSIr~vvk~sNVV 134 (391)
T KOG2865|consen 59 VSGIVATVFGATGFLGRYVVNKLAKM---GSQVIIPYRGDEYDPRHLKVMGDLGQ-VLFMKFDLRDEDSIRAVVKHSNVV 134 (391)
T ss_pred ccceEEEEecccccccHHHHHHHhhc---CCeEEEeccCCccchhheeecccccc-eeeeccCCCCHHHHHHHHHhCcEE
Confidence 55677899999999999999999998 89999988855432 11112222222 112223455544443 34599
Q ss_pred EEeccccCcchhHHHHhHhhHHHHHHHHHHHhhCCCCcCC
Q psy897 86 FIFLATLRFDEELKIAIRTNICATQTVVKLAKQCPHLRLF 125 (125)
Q Consensus 86 ih~a~~~~~~~~~~~~~~~Nv~g~~~l~~~~~~~~~~~~~ 125 (125)
||+-|.--...+ -...++|+.+...|.+.|++.+ ++||
T Consensus 135 INLIGrd~eTkn-f~f~Dvn~~~aerlAricke~G-Verf 172 (391)
T KOG2865|consen 135 INLIGRDYETKN-FSFEDVNVHIAERLARICKEAG-VERF 172 (391)
T ss_pred EEeeccccccCC-cccccccchHHHHHHHHHHhhC-hhhe
Confidence 999997433322 2334789999999999999875 5554
No 271
>TIGR01500 sepiapter_red sepiapterin reductase. This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.
Probab=98.76 E-value=3.7e-08 Score=67.60 Aligned_cols=103 Identities=13% Similarity=0.134 Sum_probs=60.5
Q ss_pred eEEEecCccchhHHHHHHHHHhC-CCccEEEEEecCCCCCC-HHHHHHHhh-h-ccCChhhhhhhhcCcc----------
Q psy897 15 VIFLTGGTGFMGKVLLDTLLRRF-PSIHSIYILVRERKGVS-PQERIEKML-D-NEGPIFKDFANLVRLK---------- 80 (125)
Q Consensus 15 ~vlitG~~G~iG~~i~~~l~~~~-~~~~~v~~~~r~~~~~~-~~~~~~~~~-~-~~~~~~~~l~~~~~l~---------- 80 (125)
.++||||+|+||.+++++|++.. ..+++|++++|+..... ..+.+.... . ....+..|+.+...++
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~ 81 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP 81 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence 58999999999999999998720 01689999998654211 111121100 0 0000111222211110
Q ss_pred -----CCCeEEEeccccC-----c-----chhHHHHhHhhHHHHHHHHHHHh
Q psy897 81 -----TQRIRFIFLATLR-----F-----DEELKIAIRTNICATQTVVKLAK 117 (125)
Q Consensus 81 -----~~~~Vih~a~~~~-----~-----~~~~~~~~~~Nv~g~~~l~~~~~ 117 (125)
..++|||+||... . .+.+...+++|+.|+..+.+.+.
T Consensus 82 g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~ 133 (256)
T TIGR01500 82 RPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVL 133 (256)
T ss_pred ccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHH
Confidence 0148999999741 1 13566788999999988877654
No 272
>PRK05599 hypothetical protein; Provisional
Probab=98.75 E-value=3.5e-08 Score=67.48 Aligned_cols=99 Identities=10% Similarity=0.073 Sum_probs=57.7
Q ss_pred ceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCC-HHHHHHHhhhc-cCChhhhhhhhcCcc-----------
Q psy897 14 GVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVS-PQERIEKMLDN-EGPIFKDFANLVRLK----------- 80 (125)
Q Consensus 14 ~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~-~~~~~~~~~~~-~~~~~~~l~~~~~l~----------- 80 (125)
|+++||||+++||.++++.|. . +.+|++.+|+.+... ..+.+.+.... ...+..|+.+...++
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~---g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 76 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-H---GEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAG 76 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-C---CCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcC
Confidence 579999999999999999997 5 689999998654221 11122111110 001111222221111
Q ss_pred CCCeEEEeccccCcc-------hhHHHHhHhhHHHHHHHHHHH
Q psy897 81 TQRIRFIFLATLRFD-------EELKIAIRTNICATQTVVKLA 116 (125)
Q Consensus 81 ~~~~Vih~a~~~~~~-------~~~~~~~~~Nv~g~~~l~~~~ 116 (125)
..|++||+||..... ..+...+.+|+.+...++..+
T Consensus 77 ~id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~ 119 (246)
T PRK05599 77 EISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVL 119 (246)
T ss_pred CCCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHH
Confidence 237999999985221 223455678888887665543
No 273
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=98.73 E-value=3.6e-08 Score=68.63 Aligned_cols=35 Identities=26% Similarity=0.329 Sum_probs=31.8
Q ss_pred eEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCC
Q psy897 15 VIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKG 52 (125)
Q Consensus 15 ~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~ 52 (125)
+|+||||||++|++++++|++. +++|++++|++..
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~---g~~V~~~~R~~~~ 35 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAA---SVPFLVASRSSSS 35 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhC---CCcEEEEeCCCcc
Confidence 4899999999999999999998 7999999998653
No 274
>PRK09620 hypothetical protein; Provisional
Probab=98.72 E-value=7.9e-08 Score=65.39 Aligned_cols=36 Identities=19% Similarity=0.408 Sum_probs=32.1
Q ss_pred cCCceEEEecCc----------------cchhHHHHHHHHHhCCCccEEEEEecC
Q psy897 11 YKDGVIFLTGGT----------------GFMGKVLLDTLLRRFPSIHSIYILVRE 49 (125)
Q Consensus 11 ~~~~~vlitG~~----------------G~iG~~i~~~l~~~~~~~~~v~~~~r~ 49 (125)
++||+|+||+|. ||+|++|+++|+++ |++|+++++.
T Consensus 1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~---Ga~V~li~g~ 52 (229)
T PRK09620 1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISK---GAHVIYLHGY 52 (229)
T ss_pred CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHC---CCeEEEEeCC
Confidence 468999999886 99999999999999 8999988764
No 275
>PRK06720 hypothetical protein; Provisional
Probab=98.72 E-value=3.3e-08 Score=64.32 Aligned_cols=38 Identities=16% Similarity=0.149 Sum_probs=34.3
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCC
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERK 51 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~ 51 (125)
++++.++||||+|+||.++++.|.+. |.+|++.+|+..
T Consensus 14 l~gk~~lVTGa~~GIG~aia~~l~~~---G~~V~l~~r~~~ 51 (169)
T PRK06720 14 LAGKVAIVTGGGIGIGRNTALLLAKQ---GAKVIVTDIDQE 51 (169)
T ss_pred cCCCEEEEecCCChHHHHHHHHHHHC---CCEEEEEECCHH
Confidence 57899999999999999999999998 799999988644
No 276
>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.71 E-value=1.8e-07 Score=65.96 Aligned_cols=36 Identities=14% Similarity=0.042 Sum_probs=31.8
Q ss_pred ccCCceEEEecCc--cchhHHHHHHHHHhCCCccEEEEEec
Q psy897 10 FYKDGVIFLTGGT--GFMGKVLLDTLLRRFPSIHSIYILVR 48 (125)
Q Consensus 10 ~~~~~~vlitG~~--G~iG~~i~~~l~~~~~~~~~v~~~~r 48 (125)
.+++|+++|||++ .+||+++++.|+++ |.+|++.++
T Consensus 5 ~~~gk~alITGa~~~~GIG~a~A~~la~~---Ga~Vvv~~~ 42 (299)
T PRK06300 5 DLTGKIAFIAGIGDDQGYGWGIAKALAEA---GATILVGTW 42 (299)
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHHHHHHC---CCEEEEEec
Confidence 3578999999995 99999999999999 899998654
No 277
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=98.69 E-value=1.2e-07 Score=62.15 Aligned_cols=102 Identities=14% Similarity=0.154 Sum_probs=60.9
Q ss_pred eEEEecCccchhHHHHHHHHHhCCCccEEEEEecC-CCCCCHHHHHHHhhhcc---CChhhhhhhhcCcc----------
Q psy897 15 VIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRE-RKGVSPQERIEKMLDNE---GPIFKDFANLVRLK---------- 80 (125)
Q Consensus 15 ~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~-~~~~~~~~~~~~~~~~~---~~~~~~l~~~~~l~---------- 80 (125)
+++||||.|.||..+++.|.++ +..+++++.|+ .........+.++.... .....|+.+...+.
T Consensus 2 tylitGG~gglg~~la~~La~~--~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~ 79 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAER--GARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRF 79 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT--T-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTS
T ss_pred EEEEECCccHHHHHHHHHHHHc--CCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhcc
Confidence 6899999999999999999998 35789999998 33334444444433210 00112333222111
Q ss_pred -CCCeEEEeccccCcc-------hhHHHHhHhhHHHHHHHHHHHhh
Q psy897 81 -TQRIRFIFLATLRFD-------EELKIAIRTNICATQTVVKLAKQ 118 (125)
Q Consensus 81 -~~~~Vih~a~~~~~~-------~~~~~~~~~Nv~g~~~l~~~~~~ 118 (125)
..+.|||+||..... +.+...+..-+.|+.+|.++...
T Consensus 80 ~~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~ 125 (181)
T PF08659_consen 80 GPIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALEN 125 (181)
T ss_dssp S-EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhc
Confidence 114899999986321 34666777889999999998865
No 278
>KOG1431|consensus
Probab=98.67 E-value=9.7e-08 Score=64.40 Aligned_cols=93 Identities=15% Similarity=0.158 Sum_probs=58.8
Q ss_pred ceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhccCChhhhhhhhcCccCCCeEEEeccccC
Q psy897 14 GVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDNEGPIFKDFANLVRLKTQRIRFIFLATLR 93 (125)
Q Consensus 14 ~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~Vih~a~~~~ 93 (125)
++|+|||++|.+|++|.+.+....+++.+-...+....+.......+.++.+.. +-+|||+||.+.
T Consensus 2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~skd~DLt~~a~t~~lF~~ek--------------PthVIhlAAmVG 67 (315)
T KOG1431|consen 2 KKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGSKDADLTNLADTRALFESEK--------------PTHVIHLAAMVG 67 (315)
T ss_pred ceEEEecCCchHHHHHHHHHHhcCCCCcceEEeccccccccchHHHHHHHhccC--------------CceeeehHhhhc
Confidence 789999999999999999998874333444444444433443444444444211 149999999862
Q ss_pred c--c--hhHHHHhHhhHHHHHHHHHHHhhCC
Q psy897 94 F--D--EELKIAIRTNICATQTVVKLAKQCP 120 (125)
Q Consensus 94 ~--~--~~~~~~~~~Nv~g~~~l~~~~~~~~ 120 (125)
- . .-+...++.|+.-.-|++..|.+.+
T Consensus 68 Glf~N~~ynldF~r~Nl~indNVlhsa~e~g 98 (315)
T KOG1431|consen 68 GLFHNNTYNLDFIRKNLQINDNVLHSAHEHG 98 (315)
T ss_pred chhhcCCCchHHHhhcceechhHHHHHHHhc
Confidence 1 1 1234556777777777777766553
No 279
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=98.63 E-value=4.1e-08 Score=66.53 Aligned_cols=94 Identities=19% Similarity=0.285 Sum_probs=56.2
Q ss_pred EEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhccCChhhhhhhhcCcc----CCCeEEEeccc
Q psy897 16 IFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDNEGPIFKDFANLVRLK----TQRIRFIFLAT 91 (125)
Q Consensus 16 vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~----~~~~Vih~a~~ 91 (125)
|+|+||+|.+|+.+++.|++. ++.|.++.|+.+.. ..+.++.... ..+..|+.+...+. ..|.|+.+.+.
T Consensus 1 I~V~GatG~~G~~v~~~L~~~---~~~V~~l~R~~~~~-~~~~l~~~g~--~vv~~d~~~~~~l~~al~g~d~v~~~~~~ 74 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSA---GFSVRALVRDPSSD-RAQQLQALGA--EVVEADYDDPESLVAALKGVDAVFSVTPP 74 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHT---TGCEEEEESSSHHH-HHHHHHHTTT--EEEES-TT-HHHHHHHHTTCSEEEEESSC
T ss_pred CEEECCccHHHHHHHHHHHhC---CCCcEEEEeccchh-hhhhhhcccc--eEeecccCCHHHHHHHHcCCceEEeecCc
Confidence 799999999999999999997 79999999977321 1112222211 11112222221211 33788888776
Q ss_pred cCcchhHHHHhHhhHHHHHHHHHHHhhCCCCcCC
Q psy897 92 LRFDEELKIAIRTNICATQTVVKLAKQCPHLRLF 125 (125)
Q Consensus 92 ~~~~~~~~~~~~~Nv~g~~~l~~~~~~~~~~~~~ 125 (125)
.. ..-.....+++++|++.+ +|+|
T Consensus 75 ~~---------~~~~~~~~~li~Aa~~ag-Vk~~ 98 (233)
T PF05368_consen 75 SH---------PSELEQQKNLIDAAKAAG-VKHF 98 (233)
T ss_dssp SC---------CCHHHHHHHHHHHHHHHT--SEE
T ss_pred ch---------hhhhhhhhhHHHhhhccc-cceE
Confidence 54 112334456788888765 6654
No 280
>KOG1610|consensus
Probab=98.59 E-value=3.6e-07 Score=64.09 Aligned_cols=101 Identities=16% Similarity=0.150 Sum_probs=65.0
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhh--hccCChhhhhhhhcCcc--------
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKML--DNEGPIFKDFANLVRLK-------- 80 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~l~-------- 80 (125)
.+.|.|+|||+-++.|..++.+|.+. |..|.+-...+.. .+.++... ++...+.-|+..++.++
T Consensus 27 ~~~k~VlITGCDSGfG~~LA~~L~~~---Gf~V~Agcl~~~g---ae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~ 100 (322)
T KOG1610|consen 27 LSDKAVLITGCDSGFGRLLAKKLDKK---GFRVFAGCLTEEG---AESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKK 100 (322)
T ss_pred cCCcEEEEecCCcHHHHHHHHHHHhc---CCEEEEEeecCch---HHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHH
Confidence 56789999999999999999999999 8888886633321 11222211 11111222333322221
Q ss_pred -CCC----eEEEeccccCc--------chhHHHHhHhhHHHHHHHHHHHh
Q psy897 81 -TQR----IRFIFLATLRF--------DEELKIAIRTNICATQTVVKLAK 117 (125)
Q Consensus 81 -~~~----~Vih~a~~~~~--------~~~~~~~~~~Nv~g~~~l~~~~~ 117 (125)
..+ .||||||+... .+++...+++|+.|+..+..+..
T Consensus 101 ~l~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~l 150 (322)
T KOG1610|consen 101 HLGEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFL 150 (322)
T ss_pred hcccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHH
Confidence 111 99999997521 16788899999999888866543
No 281
>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=98.58 E-value=4.1e-07 Score=64.94 Aligned_cols=106 Identities=14% Similarity=0.082 Sum_probs=62.8
Q ss_pred ceEEEecCccchhHHHHHHHHHhCC----CccEEEEEecCCCCCCHHHHHHHhhhccCChhhhhhhh----cCccCCCeE
Q psy897 14 GVIFLTGGTGFMGKVLLDTLLRRFP----SIHSIYILVRERKGVSPQERIEKMLDNEGPIFKDFANL----VRLKTQRIR 85 (125)
Q Consensus 14 ~~vlitG~~G~iG~~i~~~l~~~~~----~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~~l~~~~~V 85 (125)
-+|+|||++|++|++++..|+...- .+.+++++++++..........++.+...+...++... ..++..|+|
T Consensus 3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~~~~~~~~~~~~~~~~~~l~~aDiV 82 (325)
T cd01336 3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCAFPLLKSVVATTDPEEAFKDVDVA 82 (325)
T ss_pred eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhccccccCCceecCCHHHHhCCCCEE
Confidence 4699999999999999999987510 12489999986532111110111111000111111110 112234899
Q ss_pred EEeccccCc-chhHHHHhHhhHHHHHHHHHHHhhC
Q psy897 86 FIFLATLRF-DEELKIAIRTNICATQTVVKLAKQC 119 (125)
Q Consensus 86 ih~a~~~~~-~~~~~~~~~~Nv~g~~~l~~~~~~~ 119 (125)
||+||..+. ..+....++.|+.-...+.+..++.
T Consensus 83 I~tAG~~~~~~~~R~~l~~~N~~i~~~i~~~i~~~ 117 (325)
T cd01336 83 ILVGAMPRKEGMERKDLLKANVKIFKEQGEALDKY 117 (325)
T ss_pred EEeCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999743 3445677789998888887766655
No 282
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=98.56 E-value=9.4e-07 Score=76.28 Aligned_cols=37 Identities=19% Similarity=0.163 Sum_probs=32.9
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecC
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRE 49 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~ 49 (125)
-++++++||||+|+||..++++|+++ .+.++++++|+
T Consensus 1995 ~~g~vvLVTGGarGIG~aiA~~LA~~--~ga~viL~gRs 2031 (2582)
T TIGR02813 1995 NSDDVFLVTGGAKGVTFECALELAKQ--CQAHFILAGRS 2031 (2582)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHh--cCCEEEEEeCC
Confidence 35789999999999999999999987 35899999987
No 283
>KOG1209|consensus
Probab=98.53 E-value=1.9e-07 Score=62.47 Aligned_cols=97 Identities=11% Similarity=0.142 Sum_probs=61.1
Q ss_pred CceEEEec-CccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHH-HhhhccCChhhhhhhhcCcc----------
Q psy897 13 DGVIFLTG-GTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIE-KMLDNEGPIFKDFANLVRLK---------- 80 (125)
Q Consensus 13 ~~~vlitG-~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~l~---------- 80 (125)
.+.|+||| +.|+||.++++++.+. |+.|+...|....-. .+. +..- .+.--|+..+..+.
T Consensus 7 ~k~VlItgcs~GGIG~ala~ef~~~---G~~V~AtaR~~e~M~---~L~~~~gl--~~~kLDV~~~~~V~~v~~evr~~~ 78 (289)
T KOG1209|consen 7 PKKVLITGCSSGGIGYALAKEFARN---GYLVYATARRLEPMA---QLAIQFGL--KPYKLDVSKPEEVVTVSGEVRANP 78 (289)
T ss_pred CCeEEEeecCCcchhHHHHHHHHhC---CeEEEEEccccchHh---hHHHhhCC--eeEEeccCChHHHHHHHHHHhhCC
Confidence 47899998 5689999999999998 899999999655321 111 1000 11111111111100
Q ss_pred --CCCeEEEecccc----C---cchhHHHHhHhhHHHHHHHHHHHh
Q psy897 81 --TQRIRFIFLATL----R---FDEELKIAIRTNICATQTVVKLAK 117 (125)
Q Consensus 81 --~~~~Vih~a~~~----~---~~~~~~~~~~~Nv~g~~~l~~~~~ 117 (125)
.-|++||+||.. . ...+-+..+++|+.|..++-++..
T Consensus 79 ~Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~ 124 (289)
T KOG1209|consen 79 DGKLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALS 124 (289)
T ss_pred CCceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHH
Confidence 115999999985 1 124566788899999877766654
No 284
>PTZ00325 malate dehydrogenase; Provisional
Probab=98.52 E-value=1.1e-06 Score=62.60 Aligned_cols=109 Identities=13% Similarity=0.071 Sum_probs=70.4
Q ss_pred ccccCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhccCChhhhhhh----hcCccCCC
Q psy897 8 EDFYKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDNEGPIFKDFAN----LVRLKTQR 83 (125)
Q Consensus 8 ~~~~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~l~~~~ 83 (125)
+...++++|.|+|++|.+|+.++..|... .-..++.++|+...... ...+.+... .....+..+ ...+...|
T Consensus 3 ~~~~~~~KI~IiGaaG~VGs~~a~~l~~~-~~~~elvL~Di~~~~g~-a~Dl~~~~~--~~~v~~~td~~~~~~~l~gaD 78 (321)
T PTZ00325 3 PSALKMFKVAVLGAAGGIGQPLSLLLKQN-PHVSELSLYDIVGAPGV-AADLSHIDT--PAKVTGYADGELWEKALRGAD 78 (321)
T ss_pred CcCCCCCEEEEECCCCHHHHHHHHHHhcC-CCCCEEEEEecCCCccc-ccchhhcCc--CceEEEecCCCchHHHhCCCC
Confidence 45567889999999999999999988855 12468999998322111 112222111 101111111 11222348
Q ss_pred eEEEeccccCc-chhHHHHhHhhHHHHHHHHHHHhhCC
Q psy897 84 IRFIFLATLRF-DEELKIAIRTNICATQTVVKLAKQCP 120 (125)
Q Consensus 84 ~Vih~a~~~~~-~~~~~~~~~~Nv~g~~~l~~~~~~~~ 120 (125)
+||+++|...- ..++...+..|+..+.++++++++..
T Consensus 79 vVVitaG~~~~~~~tR~dll~~N~~i~~~i~~~i~~~~ 116 (321)
T PTZ00325 79 LVLICAGVPRKPGMTRDDLFNTNAPIVRDLVAAVASSA 116 (321)
T ss_pred EEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
Confidence 99999999743 34567788999999999999988764
No 285
>KOG1199|consensus
Probab=98.50 E-value=5.3e-08 Score=63.21 Aligned_cols=98 Identities=18% Similarity=0.211 Sum_probs=66.7
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhccCChh--hhhhhhcCcc--------
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDNEGPIF--KDFANLVRLK-------- 80 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~--~~l~~~~~l~-------- 80 (125)
.++-..+||||.+.+|++-+++|.+. |..+.+++.+.+.-. +.-+++.+ ..+| .++..+.++.
T Consensus 7 ~kglvalvtggasglg~ataerlakq---gasv~lldlp~skg~--~vakelg~--~~vf~padvtsekdv~aala~ak~ 79 (260)
T KOG1199|consen 7 TKGLVALVTGGASGLGKATAERLAKQ---GASVALLDLPQSKGA--DVAKELGG--KVVFTPADVTSEKDVRAALAKAKA 79 (260)
T ss_pred hcCeeEEeecCcccccHHHHHHHHhc---CceEEEEeCCcccch--HHHHHhCC--ceEEeccccCcHHHHHHHHHHHHh
Confidence 45778999999999999999999998 899999998766432 12223333 1111 1222211111
Q ss_pred ---CCCeEEEecccc------Cc-------chhHHHHhHhhHHHHHHHHHH
Q psy897 81 ---TQRIRFIFLATL------RF-------DEELKIAIRTNICATQTVVKL 115 (125)
Q Consensus 81 ---~~~~Vih~a~~~------~~-------~~~~~~~~~~Nv~g~~~l~~~ 115 (125)
.-|..+||||+. ++ -+++...+++|+.||+|+++.
T Consensus 80 kfgrld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl 130 (260)
T KOG1199|consen 80 KFGRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRL 130 (260)
T ss_pred hccceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeee
Confidence 237999999985 11 156777888999999999874
No 286
>KOG1611|consensus
Probab=98.49 E-value=3.5e-07 Score=61.50 Aligned_cols=97 Identities=18% Similarity=0.137 Sum_probs=56.9
Q ss_pred CceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhh--hc-cCChhhhhhhh-------------
Q psy897 13 DGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKML--DN-EGPIFKDFANL------------- 76 (125)
Q Consensus 13 ~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~--~~-~~~~~~~l~~~------------- 76 (125)
.+.++||||+.+||-.|+++|++. ++...++...|++... ......+. +. .+-+.-|+...
T Consensus 3 pksv~ItGaNRGIGlgLVk~llk~-~~i~~iiat~r~~e~a--~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~i 79 (249)
T KOG1611|consen 3 PKSVFITGANRGIGLGLVKELLKD-KGIEVIIATARDPEKA--ATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKI 79 (249)
T ss_pred CccEEEeccCcchhHHHHHHHhcC-CCcEEEEEecCChHHh--hHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhh
Confidence 467999999999999999999987 3333444444544432 22232221 10 00000111111
Q ss_pred ---cCccCCCeEEEeccccC-c-------chhHHHHhHhhHHHHHHHHHH
Q psy897 77 ---VRLKTQRIRFIFLATLR-F-------DEELKIAIRTNICATQTVVKL 115 (125)
Q Consensus 77 ---~~l~~~~~Vih~a~~~~-~-------~~~~~~~~~~Nv~g~~~l~~~ 115 (125)
.++ +++|++||+.. + ...+-..+++|..|+..+.+.
T Consensus 80 Vg~~Gl---nlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~ 126 (249)
T KOG1611|consen 80 VGSDGL---NLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQA 126 (249)
T ss_pred cccCCc---eEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHH
Confidence 122 59999999862 1 133666778999998777664
No 287
>KOG1210|consensus
Probab=98.48 E-value=1e-06 Score=61.82 Aligned_cols=101 Identities=21% Similarity=0.203 Sum_probs=63.9
Q ss_pred ceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHH-HHHHHhhhcc------CCh--hhhhhhh-cCc---c
Q psy897 14 GVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQ-ERIEKMLDNE------GPI--FKDFANL-VRL---K 80 (125)
Q Consensus 14 ~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~-~~~~~~~~~~------~~~--~~~l~~~-~~l---~ 80 (125)
++++||||+..+|.+++.++..+ |++|.+..|+....... ..+.-..... .++ ++.+... ..+ +
T Consensus 34 ~hi~itggS~glgl~la~e~~~~---ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~ 110 (331)
T KOG1210|consen 34 RHILITGGSSGLGLALALECKRE---GADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLE 110 (331)
T ss_pred ceEEEecCcchhhHHHHHHHHHc---cCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhcc
Confidence 58999999999999999999998 89999999976643211 1111100000 011 1111100 011 1
Q ss_pred -CCCeEEEeccccCc----c---hhHHHHhHhhHHHHHHHHHHHh
Q psy897 81 -TQRIRFIFLATLRF----D---EELKIAIRTNICATQTVVKLAK 117 (125)
Q Consensus 81 -~~~~Vih~a~~~~~----~---~~~~~~~~~Nv~g~~~l~~~~~ 117 (125)
..|.++||||..-. + +.....+++|..|+.+++.++.
T Consensus 111 ~~~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~ 155 (331)
T KOG1210|consen 111 GPIDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAA 155 (331)
T ss_pred CCcceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHH
Confidence 34799999998611 1 3455677899999999988644
No 288
>KOG1203|consensus
Probab=98.42 E-value=5.3e-07 Score=65.66 Aligned_cols=109 Identities=17% Similarity=0.188 Sum_probs=63.8
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHH--HHHhhhccCChhhhhhhhcCcc--------
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQER--IEKMLDNEGPIFKDFANLVRLK-------- 80 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~l~-------- 80 (125)
.+...|+|+||+|.+|+-+++.|+++ |+.|+++.|+......... ..++.. ..+..+.....+..
T Consensus 77 ~~~~~VlVvGatG~vG~~iv~~llkr---gf~vra~VRd~~~a~~~~~~~~~d~~~--~~v~~~~~~~~d~~~~~~~~~~ 151 (411)
T KOG1203|consen 77 KKPTTVLVVGATGKVGRRIVKILLKR---GFSVRALVRDEQKAEDLLGVFFVDLGL--QNVEADVVTAIDILKKLVEAVP 151 (411)
T ss_pred CCCCeEEEecCCCchhHHHHHHHHHC---CCeeeeeccChhhhhhhhccccccccc--ceeeeccccccchhhhhhhhcc
Confidence 44578999999999999999999999 7999999997664221111 001111 11111111100100
Q ss_pred -CCCeEEEeccccCcchhHHHHhHhhHHHHHHHHHHHhhCCCCcCC
Q psy897 81 -TQRIRFIFLATLRFDEELKIAIRTNICATQTVVKLAKQCPHLRLF 125 (125)
Q Consensus 81 -~~~~Vih~a~~~~~~~~~~~~~~~Nv~g~~~l~~~~~~~~~~~~~ 125 (125)
...+++-++|-....++.....++-+.|+.+++++|+..+ +++|
T Consensus 152 ~~~~~v~~~~ggrp~~ed~~~p~~VD~~g~knlvdA~~~aG-vk~~ 196 (411)
T KOG1203|consen 152 KGVVIVIKGAGGRPEEEDIVTPEKVDYEGTKNLVDACKKAG-VKRV 196 (411)
T ss_pred ccceeEEecccCCCCcccCCCcceecHHHHHHHHHHHHHhC-CceE
Confidence 1124444444433222223444689999999999997654 5543
No 289
>KOG1014|consensus
Probab=98.41 E-value=5.3e-07 Score=63.15 Aligned_cols=100 Identities=18% Similarity=0.215 Sum_probs=64.4
Q ss_pred CceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCC-HHHHHHHhhhc-----------cCChhhhhhhhc-Cc
Q psy897 13 DGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVS-PQERIEKMLDN-----------EGPIFKDFANLV-RL 79 (125)
Q Consensus 13 ~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~-~~~~~~~~~~~-----------~~~~~~~l~~~~-~l 79 (125)
++=..|||||.+||++.+++|+++ |.+|++++|..++.. .++++.+-... ....++.+.+.. ++
T Consensus 49 g~WAVVTGaTDGIGKayA~eLAkr---G~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~ 125 (312)
T KOG1014|consen 49 GSWAVVTGATDGIGKAYARELAKR---GFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGL 125 (312)
T ss_pred CCEEEEECCCCcchHHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCC
Confidence 467899999999999999999999 899999999877542 33344332110 011233333311 11
Q ss_pred cCCCeEEEeccccCcc-----h----hHHHHhHhhHHHHHHHHHHH
Q psy897 80 KTQRIRFIFLATLRFD-----E----ELKIAIRTNICATQTVVKLA 116 (125)
Q Consensus 80 ~~~~~Vih~a~~~~~~-----~----~~~~~~~~Nv~g~~~l~~~~ 116 (125)
...++|||+|+.... + ..+..+.+|+.++..+.+..
T Consensus 126 -~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~i 170 (312)
T KOG1014|consen 126 -DVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLI 170 (312)
T ss_pred -ceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHh
Confidence 224999999997421 1 23445568998887776653
No 290
>KOG1372|consensus
Probab=98.33 E-value=8.3e-07 Score=60.76 Aligned_cols=104 Identities=18% Similarity=0.242 Sum_probs=72.6
Q ss_pred CceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhcc--------CChhhhhhhhcCcc----
Q psy897 13 DGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDNE--------GPIFKDFANLVRLK---- 80 (125)
Q Consensus 13 ~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~--------~~~~~~l~~~~~l~---- 80 (125)
.|..||||-+|.=|++|++-|+.. |+.|+.+.|..+.+. ..+++++-... ...++|+.+...+-
T Consensus 28 rkvALITGItGQDGSYLaEfLL~K---gYeVHGiiRRsSsFN-T~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~ 103 (376)
T KOG1372|consen 28 RKVALITGITGQDGSYLAEFLLSK---GYEVHGIIRRSSSFN-TARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLIS 103 (376)
T ss_pred ceEEEEecccCCCchHHHHHHHhC---CceeeEEEeeccccc-hhhhhhhhcCchhcccceeEEeeccccchHHHHHHHh
Confidence 468999999999999999999998 899999988766543 23555543310 11234554432221
Q ss_pred --CCCeEEEeccccCcc---hhHHHHhHhhHHHHHHHHHHHhhCC
Q psy897 81 --TQRIRFIFLATLRFD---EELKIAIRTNICATQTVVKLAKQCP 120 (125)
Q Consensus 81 --~~~~Vih~a~~~~~~---~~~~~~~~~Nv~g~~~l~~~~~~~~ 120 (125)
.++-|+|+|+.+... +-++..-++...||..|+++.+.+.
T Consensus 104 ~ikPtEiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~ 148 (376)
T KOG1372|consen 104 TIKPTEVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACR 148 (376)
T ss_pred ccCchhhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcC
Confidence 335899999997543 1234555788889999999988765
No 291
>PRK06732 phosphopantothenate--cysteine ligase; Validated
Probab=98.30 E-value=9.7e-06 Score=55.22 Aligned_cols=31 Identities=26% Similarity=0.444 Sum_probs=25.7
Q ss_pred EEe-cCccchhHHHHHHHHHhCCCccEEEEEecCC
Q psy897 17 FLT-GGTGFMGKVLLDTLLRRFPSIHSIYILVRER 50 (125)
Q Consensus 17 lit-G~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~ 50 (125)
+|| .+|||+|++|+++|+++ |++|++++++.
T Consensus 19 ~itN~SSG~iG~aLA~~L~~~---G~~V~li~r~~ 50 (229)
T PRK06732 19 GITNHSTGQLGKIIAETFLAA---GHEVTLVTTKT 50 (229)
T ss_pred eecCccchHHHHHHHHHHHhC---CCEEEEEECcc
Confidence 344 46889999999999998 89999998753
No 292
>PLN00106 malate dehydrogenase
Probab=98.29 E-value=7.5e-06 Score=58.42 Aligned_cols=104 Identities=11% Similarity=0.009 Sum_probs=66.8
Q ss_pred CceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhccCChhhhhh-h---hcCccCCCeEEEe
Q psy897 13 DGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDNEGPIFKDFA-N---LVRLKTQRIRFIF 88 (125)
Q Consensus 13 ~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~l~-~---~~~l~~~~~Vih~ 88 (125)
.++|.|+|++|.+|+.++..|.... -..++.++|.++..... ..+.+... .....++. . ...+...|+|||+
T Consensus 18 ~~KV~IiGaaG~VG~~~a~~l~~~~-~~~el~L~Di~~~~g~a-~Dl~~~~~--~~~i~~~~~~~d~~~~l~~aDiVVit 93 (323)
T PLN00106 18 GFKVAVLGAAGGIGQPLSLLMKMNP-LVSELHLYDIANTPGVA-ADVSHINT--PAQVRGFLGDDQLGDALKGADLVIIP 93 (323)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCC-CCCEEEEEecCCCCeeE-chhhhCCc--CceEEEEeCCCCHHHHcCCCCEEEEe
Confidence 4689999999999999999998651 13589999986632111 11211111 00000100 0 0122234899999
Q ss_pred ccccCc-chhHHHHhHhhHHHHHHHHHHHhhCC
Q psy897 89 LATLRF-DEELKIAIRTNICATQTVVKLAKQCP 120 (125)
Q Consensus 89 a~~~~~-~~~~~~~~~~Nv~g~~~l~~~~~~~~ 120 (125)
||..+. ..++...+..|+..+..+.+.+++..
T Consensus 94 AG~~~~~g~~R~dll~~N~~i~~~i~~~i~~~~ 126 (323)
T PLN00106 94 AGVPRKPGMTRDDLFNINAGIVKTLCEAVAKHC 126 (323)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
Confidence 999754 34677788999999999999887654
No 293
>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=98.26 E-value=1.1e-06 Score=60.35 Aligned_cols=36 Identities=36% Similarity=0.571 Sum_probs=33.0
Q ss_pred ceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCC
Q psy897 14 GVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKG 52 (125)
Q Consensus 14 ~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~ 52 (125)
++|+||||||++|++++++|+++ +++|++..|++..
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~~~---~~~v~~~~r~~~~ 36 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELLAR---GHEVRAAVRNPEA 36 (275)
T ss_pred CeEEEEecccchHHHHHHHHHhC---CCEEEEEEeCHHH
Confidence 47999999999999999999999 8999999997663
No 294
>PRK14982 acyl-ACP reductase; Provisional
Probab=98.25 E-value=4.5e-06 Score=59.85 Aligned_cols=40 Identities=15% Similarity=0.340 Sum_probs=32.7
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCC
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERK 51 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~ 51 (125)
+++++++||||+|+||+.+++.|.+.. +..+++++.|+..
T Consensus 153 l~~k~VLVtGAtG~IGs~lar~L~~~~-gv~~lilv~R~~~ 192 (340)
T PRK14982 153 LSKATVAVVGATGDIGSAVCRWLDAKT-GVAELLLVARQQE 192 (340)
T ss_pred cCCCEEEEEccChHHHHHHHHHHHhhC-CCCEEEEEcCCHH
Confidence 678999999999999999999998641 2368888888643
No 295
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=98.25 E-value=9.1e-07 Score=64.72 Aligned_cols=37 Identities=22% Similarity=0.311 Sum_probs=33.7
Q ss_pred cCCceEEEecC----------------ccchhHHHHHHHHHhCCCccEEEEEecCC
Q psy897 11 YKDGVIFLTGG----------------TGFMGKVLLDTLLRRFPSIHSIYILVRER 50 (125)
Q Consensus 11 ~~~~~vlitG~----------------~G~iG~~i~~~l~~~~~~~~~v~~~~r~~ 50 (125)
+++|+++|||| +|.+|.+++++|.++ |++|++++++.
T Consensus 186 l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~---Ga~V~~v~~~~ 238 (399)
T PRK05579 186 LAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARR---GADVTLVSGPV 238 (399)
T ss_pred cCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHC---CCEEEEeCCCc
Confidence 67899999999 888999999999999 89999998764
No 296
>PRK05086 malate dehydrogenase; Provisional
Probab=98.13 E-value=3.6e-05 Score=54.75 Aligned_cols=103 Identities=13% Similarity=0.084 Sum_probs=63.3
Q ss_pred ceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhccCChh----hhhhhhcCccCCCeEEEec
Q psy897 14 GVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDNEGPIF----KDFANLVRLKTQRIRFIFL 89 (125)
Q Consensus 14 ~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~----~~l~~~~~l~~~~~Vih~a 89 (125)
|+++|+||+|.+|++++..|....+.++.+.++++++........+.+. .....+. +++.+ .+...|+||.++
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~~g~alDl~~~-~~~~~i~~~~~~d~~~--~l~~~DiVIita 77 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVTPGVAVDLSHI-PTAVKIKGFSGEDPTP--ALEGADVVLISA 77 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCCcceehhhhcC-CCCceEEEeCCCCHHH--HcCCCCEEEEcC
Confidence 5899999999999999998865322357888888864321101112111 0000110 11111 222348999999
Q ss_pred cccCc-chhHHHHhHhhHHHHHHHHHHHhhC
Q psy897 90 ATLRF-DEELKIAIRTNICATQTVVKLAKQC 119 (125)
Q Consensus 90 ~~~~~-~~~~~~~~~~Nv~g~~~l~~~~~~~ 119 (125)
|..+- ..+....+..|......+++.+++.
T Consensus 78 G~~~~~~~~R~dll~~N~~i~~~ii~~i~~~ 108 (312)
T PRK05086 78 GVARKPGMDRSDLFNVNAGIVKNLVEKVAKT 108 (312)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 98643 2345667789999999999988775
No 297
>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B ....
Probab=98.06 E-value=1.9e-05 Score=53.74 Aligned_cols=91 Identities=12% Similarity=0.166 Sum_probs=60.0
Q ss_pred cCc--cchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhcc--CC-------------hhhhhhhh--cCcc
Q psy897 20 GGT--GFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDNE--GP-------------IFKDFANL--VRLK 80 (125)
Q Consensus 20 G~~--G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~--~~-------------~~~~l~~~--~~l~ 80 (125)
|++ +.||.+++++|++. |++|++.+|+.... .+.+.++.... .. +++.+.+. ..+
T Consensus 1 g~~~s~GiG~aia~~l~~~---Ga~V~~~~~~~~~~--~~~~~~l~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~g~i- 74 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEE---GANVILTDRNEEKL--ADALEELAKEYGAEVIQCDLSDEESVEALFDEAVERFGGRI- 74 (241)
T ss_dssp STSSTSHHHHHHHHHHHHT---TEEEEEEESSHHHH--HHHHHHHHHHTTSEEEESCTTSHHHHHHHHHHHHHHHCSSE-
T ss_pred CCCCCCChHHHHHHHHHHC---CCEEEEEeCChHHH--HHHHHHHHHHcCCceEeecCcchHHHHHHHHHHHhhcCCCe-
Confidence 566 99999999999999 89999999976531 12222222110 10 11122221 123
Q ss_pred CCCeEEEeccccCc-----------chhHHHHhHhhHHHHHHHHHHHhh
Q psy897 81 TQRIRFIFLATLRF-----------DEELKIAIRTNICATQTVVKLAKQ 118 (125)
Q Consensus 81 ~~~~Vih~a~~~~~-----------~~~~~~~~~~Nv~g~~~l~~~~~~ 118 (125)
|++||++|.... .+.+...+++|+.+...+++++.+
T Consensus 75 --D~lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (241)
T PF13561_consen 75 --DILVNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALP 121 (241)
T ss_dssp --SEEEEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred --EEEEecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 799999998643 145777889999999999887754
No 298
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=97.94 E-value=4.5e-05 Score=50.10 Aligned_cols=37 Identities=27% Similarity=0.416 Sum_probs=34.2
Q ss_pred ceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCC
Q psy897 14 GVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGV 53 (125)
Q Consensus 14 ~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~ 53 (125)
|+|.|.|+||-+|++|+++..++ |+.|.++.|++.+.
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~R---GHeVTAivRn~~K~ 37 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKR---GHEVTAIVRNASKL 37 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhC---CCeeEEEEeChHhc
Confidence 57999999999999999999999 89999999988754
No 299
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=97.82 E-value=4.4e-05 Score=55.60 Aligned_cols=34 Identities=9% Similarity=0.047 Sum_probs=29.4
Q ss_pred CCceEEEecCccchhHH--HHHHHHHhCCCccEEEEEecC
Q psy897 12 KDGVIFLTGGTGFMGKV--LLDTLLRRFPSIHSIYILVRE 49 (125)
Q Consensus 12 ~~~~vlitG~~G~iG~~--i~~~l~~~~~~~~~v~~~~r~ 49 (125)
.+|++||||+++.+|.+ +++.| +. |.+++++++.
T Consensus 40 ggK~aLVTGaSsGIGlA~~IA~al-~~---GA~Vi~v~~~ 75 (398)
T PRK13656 40 GPKKVLVIGASSGYGLASRIAAAF-GA---GADTLGVFFE 75 (398)
T ss_pred CCCEEEEECCCchHhHHHHHHHHH-Hc---CCeEEEEecC
Confidence 36899999999999999 89999 77 7888888753
No 300
>cd00704 MDH Malate dehydrogenase. Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.81 E-value=0.00013 Score=52.18 Aligned_cols=102 Identities=16% Similarity=0.080 Sum_probs=61.1
Q ss_pred eEEEecCccchhHHHHHHHHHhCC----CccEEEEEecCC--CCCCH-HHHHHHhhhccCChhh--hhh--hhcCccCCC
Q psy897 15 VIFLTGGTGFMGKVLLDTLLRRFP----SIHSIYILVRER--KGVSP-QERIEKMLDNEGPIFK--DFA--NLVRLKTQR 83 (125)
Q Consensus 15 ~vlitG~~G~iG~~i~~~l~~~~~----~~~~v~~~~r~~--~~~~~-~~~~~~~~~~~~~~~~--~l~--~~~~l~~~~ 83 (125)
+|.|+|++|.+|+.++..|....- ...+++.+|+++ +.... ...+.+... +... .+. ....++..|
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~g~~~Dl~d~~~---~~~~~~~i~~~~~~~~~~aD 78 (323)
T cd00704 2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEGVVMELQDCAF---PLLKGVVITTDPEEAFKDVD 78 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccceeeeehhhhcc---cccCCcEEecChHHHhCCCC
Confidence 689999999999999998887510 023588898876 32110 011111110 0000 111 011222448
Q ss_pred eEEEeccccCcc-hhHHHHhHhhHHHHHHHHHHHhhC
Q psy897 84 IRFIFLATLRFD-EELKIAIRTNICATQTVVKLAKQC 119 (125)
Q Consensus 84 ~Vih~a~~~~~~-~~~~~~~~~Nv~g~~~l~~~~~~~ 119 (125)
+|||+||..+-. ++-...+..|..-...+.+..++.
T Consensus 79 iVVitAG~~~~~g~tR~dll~~N~~i~~~i~~~i~~~ 115 (323)
T cd00704 79 VAILVGAFPRKPGMERADLLRKNAKIFKEQGEALNKV 115 (323)
T ss_pred EEEEeCCCCCCcCCcHHHHHHHhHHHHHHHHHHHHHh
Confidence 999999987432 345567788998888888877665
No 301
>KOG2774|consensus
Probab=97.79 E-value=2e-05 Score=53.79 Aligned_cols=104 Identities=19% Similarity=0.290 Sum_probs=61.8
Q ss_pred CceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhccCChhhhhhhhcCcc------CCCeEE
Q psy897 13 DGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDNEGPIFKDFANLVRLK------TQRIRF 86 (125)
Q Consensus 13 ~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~------~~~~Vi 86 (125)
.-+|||||+-|.+|..++.-|...+ +...|+..+--++.. .+ .....-++.|+.+..+++ ..|-++
T Consensus 44 ~PrvLITG~LGQLG~~~A~LLR~~y-Gs~~VILSDI~KPp~----~V---~~~GPyIy~DILD~K~L~eIVVn~RIdWL~ 115 (366)
T KOG2774|consen 44 APRVLITGSLGQLGRGLASLLRYMY-GSECVILSDIVKPPA----NV---TDVGPYIYLDILDQKSLEEIVVNKRIDWLV 115 (366)
T ss_pred CCeEEEecchHHHhHHHHHHHHHHh-CCccEehhhccCCch----hh---cccCCchhhhhhccccHHHhhcccccceee
Confidence 4689999999999999998888774 224455444322211 11 111012233333322332 115788
Q ss_pred Eecccc-Ccch-hHHHHhHhhHHHHHHHHHHHhhCCCCcCC
Q psy897 87 IFLATL-RFDE-ELKIAIRTNICATQTVVKLAKQCPHLRLF 125 (125)
Q Consensus 87 h~a~~~-~~~~-~~~~~~~~Nv~g~~~l~~~~~~~~~~~~~ 125 (125)
|..+.. .+-+ +-.-+.++|+.|..|+++.+++.+ |+.|
T Consensus 116 HfSALLSAvGE~NVpLA~~VNI~GvHNil~vAa~~k-L~iF 155 (366)
T KOG2774|consen 116 HFSALLSAVGETNVPLALQVNIRGVHNILQVAAKHK-LKVF 155 (366)
T ss_pred eHHHHHHHhcccCCceeeeecchhhhHHHHHHHHcC-eeEe
Confidence 887764 2222 223456899999999999998875 5544
No 302
>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism. These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.
Probab=97.79 E-value=0.00019 Score=47.46 Aligned_cols=78 Identities=21% Similarity=0.327 Sum_probs=40.6
Q ss_pred cCCceEEEecC----------------ccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhh--ccCChhhh
Q psy897 11 YKDGVIFLTGG----------------TGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLD--NEGPIFKD 72 (125)
Q Consensus 11 ~~~~~vlitG~----------------~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~ 72 (125)
|+||+||||+| ||-+|.+|++++..+ |++|+.+..+.... ....+ .... ...+.++.
T Consensus 1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~---Ga~V~li~g~~~~~-~p~~~-~~i~v~sa~em~~~ 75 (185)
T PF04127_consen 1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARR---GAEVTLIHGPSSLP-PPPGV-KVIRVESAEEMLEA 75 (185)
T ss_dssp -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHT---T-EEEEEE-TTS-----TTE-EEEE-SSHHHHHHH
T ss_pred CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHC---CCEEEEEecCcccc-ccccc-eEEEecchhhhhhh
Confidence 46889999965 689999999999999 89999998763211 11001 0000 00111112
Q ss_pred hhhhcCccCCCeEEEeccccCcc
Q psy897 73 FANLVRLKTQRIRFIFLATLRFD 95 (125)
Q Consensus 73 l~~~~~l~~~~~Vih~a~~~~~~ 95 (125)
+.+. ++..|++||+||..+|.
T Consensus 76 ~~~~--~~~~Di~I~aAAVsDf~ 96 (185)
T PF04127_consen 76 VKEL--LPSADIIIMAAAVSDFR 96 (185)
T ss_dssp HHHH--GGGGSEEEE-SB--SEE
T ss_pred hccc--cCcceeEEEecchhhee
Confidence 2211 11238999999998775
No 303
>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent. This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography
Probab=97.77 E-value=0.00015 Score=51.88 Aligned_cols=105 Identities=14% Similarity=0.130 Sum_probs=61.6
Q ss_pred eEEEecCccchhHHHHHHHHHhCC----CccEEEEEecCCCCCCHHHHHHHhhhccCChhhhhh---h-hcCccCCCeEE
Q psy897 15 VIFLTGGTGFMGKVLLDTLLRRFP----SIHSIYILVRERKGVSPQERIEKMLDNEGPIFKDFA---N-LVRLKTQRIRF 86 (125)
Q Consensus 15 ~vlitG~~G~iG~~i~~~l~~~~~----~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~l~---~-~~~l~~~~~Vi 86 (125)
+|.|+|++|.+|+.++..|....- +...++++|+.+..........++.+...+....+. + ...+...|+||
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~~a~g~~~Dl~d~~~~~~~~~~~~~~~~~~~~~aDiVV 80 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMKVLEGVVMELMDCAFPLLDGVVPTHDPAVAFTDVDVAI 80 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcccccceeEeehhcccchhcCceeccCChHHHhCCCCEEE
Confidence 589999999999999999887410 012688898854421101011111110000000000 0 11222348999
Q ss_pred EeccccCcc-hhHHHHhHhhHHHHHHHHHHHhhC
Q psy897 87 IFLATLRFD-EELKIAIRTNICATQTVVKLAKQC 119 (125)
Q Consensus 87 h~a~~~~~~-~~~~~~~~~Nv~g~~~l~~~~~~~ 119 (125)
|+||..+-. ++....++.|+.-...+.+..++.
T Consensus 81 itAG~~~~~~~tr~~ll~~N~~i~k~i~~~i~~~ 114 (324)
T TIGR01758 81 LVGAFPRKEGMERRDLLSKNVKIFKEQGRALDKL 114 (324)
T ss_pred EcCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhh
Confidence 999997542 446778889999888888877665
No 304
>KOG1204|consensus
Probab=97.76 E-value=1.2e-05 Score=54.34 Aligned_cols=102 Identities=16% Similarity=0.098 Sum_probs=56.0
Q ss_pred CCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCH-HHHHH--------HhhhccCChhhhhhhhc---Cc
Q psy897 12 KDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSP-QERIE--------KMLDNEGPIFKDFANLV---RL 79 (125)
Q Consensus 12 ~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~-~~~~~--------~~~~~~~~~~~~l~~~~---~l 79 (125)
.++.+++||++.+||..++..+.+... ..-++...|....... +.... .... .+...++++.. +.
T Consensus 5 ~r~villTGaSrgiG~~~v~~i~aed~-e~~r~g~~r~~a~~~~L~v~~gd~~v~~~g~~~e--~~~l~al~e~~r~k~g 81 (253)
T KOG1204|consen 5 MRKVILLTGASRGIGTGSVATILAEDD-EALRYGVARLLAELEGLKVAYGDDFVHVVGDITE--EQLLGALREAPRKKGG 81 (253)
T ss_pred cceEEEEecCCCCccHHHHHHHHhcch-HHHHHhhhcccccccceEEEecCCcceechHHHH--HHHHHHHHhhhhhcCC
Confidence 367899999999999999888877611 1222222222221100 00000 0000 11112222210 11
Q ss_pred cCCCeEEEeccccC----------cchhHHHHhHhhHHHHHHHHHHHh
Q psy897 80 KTQRIRFIFLATLR----------FDEELKIAIRTNICATQTVVKLAK 117 (125)
Q Consensus 80 ~~~~~Vih~a~~~~----------~~~~~~~~~~~Nv~g~~~l~~~~~ 117 (125)
..+.|||+||... ..++|+..++.|+.+...|...+.
T Consensus 82 -kr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l 128 (253)
T KOG1204|consen 82 -KRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWAL 128 (253)
T ss_pred -ceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHH
Confidence 2259999999851 125789999999999888776543
No 305
>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal. In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.
Probab=97.69 E-value=6.1e-05 Score=51.26 Aligned_cols=29 Identities=28% Similarity=0.543 Sum_probs=24.3
Q ss_pred EEec-CccchhHHHHHHHHHhCCCccEEEEEec
Q psy897 17 FLTG-GTGFMGKVLLDTLLRRFPSIHSIYILVR 48 (125)
Q Consensus 17 litG-~~G~iG~~i~~~l~~~~~~~~~v~~~~r 48 (125)
+||. ++|+||.+|+++|+++ |++|+++++
T Consensus 18 ~itN~SSGgIG~AIA~~la~~---Ga~Vvlv~~ 47 (227)
T TIGR02114 18 SITNHSTGHLGKIITETFLSA---GHEVTLVTT 47 (227)
T ss_pred eecCCcccHHHHHHHHHHHHC---CCEEEEEcC
Confidence 3443 5889999999999998 899998875
No 306
>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....
Probab=97.67 E-value=0.00052 Score=43.35 Aligned_cols=104 Identities=13% Similarity=0.067 Sum_probs=63.3
Q ss_pred ceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCC-HHHHHHHhhhccCChhhhhh--hhcCccCCCeEEEecc
Q psy897 14 GVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVS-PQERIEKMLDNEGPIFKDFA--NLVRLKTQRIRFIFLA 90 (125)
Q Consensus 14 ~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~l~--~~~~l~~~~~Vih~a~ 90 (125)
++|.|+|++|.+|++++..|... +-..+++++++++.... ....+.+.... ......+. ....+...|+||-+||
T Consensus 1 ~KV~IiGa~G~VG~~~a~~l~~~-~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~-~~~~~~i~~~~~~~~~~aDivvitag 78 (141)
T PF00056_consen 1 MKVAIIGAAGNVGSTLALLLAQQ-GLADEIVLIDINEDKAEGEALDLSHASAP-LPSPVRITSGDYEALKDADIVVITAG 78 (141)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHT-TTSSEEEEEESSHHHHHHHHHHHHHHHHG-STEEEEEEESSGGGGTTESEEEETTS
T ss_pred CEEEEECCCChHHHHHHHHHHhC-CCCCceEEeccCcccceeeehhhhhhhhh-cccccccccccccccccccEEEEecc
Confidence 57999999999999999999887 33578999998654211 11122221110 10000010 0111213379999999
Q ss_pred ccCc-chhHHHHhHhhHHHHHHHHHHHhhC
Q psy897 91 TLRF-DEELKIAIRTNICATQTVVKLAKQC 119 (125)
Q Consensus 91 ~~~~-~~~~~~~~~~Nv~g~~~l~~~~~~~ 119 (125)
..+- .++..+.++.|..-...+.+...+.
T Consensus 79 ~~~~~g~sR~~ll~~N~~i~~~~~~~i~~~ 108 (141)
T PF00056_consen 79 VPRKPGMSRLDLLEANAKIVKEIAKKIAKY 108 (141)
T ss_dssp TSSSTTSSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccHHHHHHHhHhHHHHHHHHHHHh
Confidence 8642 3455667788988888888766553
No 307
>PRK08309 short chain dehydrogenase; Provisional
Probab=97.65 E-value=8e-05 Score=48.84 Aligned_cols=34 Identities=18% Similarity=0.288 Sum_probs=29.0
Q ss_pred ceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCC
Q psy897 14 GVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERK 51 (125)
Q Consensus 14 ~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~ 51 (125)
|+++||||+||+|. +++.|.+. |++|.+++|++.
T Consensus 1 m~vlVtGGtG~gg~-la~~L~~~---G~~V~v~~R~~~ 34 (177)
T PRK08309 1 MHALVIGGTGMLKR-VSLWLCEK---GFHVSVIARREV 34 (177)
T ss_pred CEEEEECcCHHHHH-HHHHHHHC---cCEEEEEECCHH
Confidence 57999999988775 99999998 799999988643
No 308
>KOG1478|consensus
Probab=97.65 E-value=0.00034 Score=48.35 Aligned_cols=39 Identities=18% Similarity=0.238 Sum_probs=28.9
Q ss_pred CceEEEecCccchhHHHHHHHHHhCCCc--cEEEEEecCCC
Q psy897 13 DGVIFLTGGTGFMGKVLLDTLLRRFPSI--HSIYILVRERK 51 (125)
Q Consensus 13 ~~~vlitG~~G~iG~~i~~~l~~~~~~~--~~v~~~~r~~~ 51 (125)
.|.++|||+++++|-+||.+|++...+. .++++..|+-+
T Consensus 3 RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~ 43 (341)
T KOG1478|consen 3 RKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMS 43 (341)
T ss_pred ceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChh
Confidence 4789999999999999999999972111 34555566544
No 309
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=97.64 E-value=4e-05 Score=56.05 Aligned_cols=37 Identities=19% Similarity=0.363 Sum_probs=32.0
Q ss_pred cCCceEEEecC----------------ccchhHHHHHHHHHhCCCccEEEEEecCC
Q psy897 11 YKDGVIFLTGG----------------TGFMGKVLLDTLLRRFPSIHSIYILVRER 50 (125)
Q Consensus 11 ~~~~~vlitG~----------------~G~iG~~i~~~l~~~~~~~~~v~~~~r~~ 50 (125)
+++++++|||| +|.+|.++++++..+ |++|+++.++.
T Consensus 183 ~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~---Ga~V~~~~g~~ 235 (390)
T TIGR00521 183 LEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKR---GADVTLITGPV 235 (390)
T ss_pred cCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHC---CCEEEEeCCCC
Confidence 67899999999 356999999999999 89999987653
No 310
>KOG4039|consensus
Probab=97.57 E-value=0.00011 Score=48.18 Aligned_cols=104 Identities=17% Similarity=0.197 Sum_probs=65.0
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCC-CCCHHHHHH-HhhhccCChhhhhhhhcCccCCCeEEEe
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERK-GVSPQERIE-KMLDNEGPIFKDFANLVRLKTQRIRFIF 88 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~-~~~~~~~~~-~~~~~~~~~~~~l~~~~~l~~~~~Vih~ 88 (125)
.+++..+|.||||..|+.+++.+++. |.-..|+++.|.+. .+..-+.+. ...+ ..-++++.. +...+|+.+.+
T Consensus 16 mq~~s~fvlGAtG~~G~~llk~~~E~-~~FSKV~~i~RR~~~d~at~k~v~q~~vD--f~Kl~~~a~--~~qg~dV~Fca 90 (238)
T KOG4039|consen 16 MQNMSGFVLGATGLCGGGLLKHAQEA-PQFSKVYAILRRELPDPATDKVVAQVEVD--FSKLSQLAT--NEQGPDVLFCA 90 (238)
T ss_pred hhccceEEEeccccccHHHHHHHHhc-ccceeEEEEEeccCCCccccceeeeEEec--hHHHHHHHh--hhcCCceEEEe
Confidence 56889999999999999999999887 44578999888633 222111111 0001 011111111 11133799999
Q ss_pred ccccCcchhHHHHhHhhHHHHHHHHHHHhhC
Q psy897 89 LATLRFDEELKIAIRTNICATQTVVKLAKQC 119 (125)
Q Consensus 89 a~~~~~~~~~~~~~~~Nv~g~~~l~~~~~~~ 119 (125)
.|.++-....+..+++.-.....+.+++++.
T Consensus 91 LgTTRgkaGadgfykvDhDyvl~~A~~AKe~ 121 (238)
T KOG4039|consen 91 LGTTRGKAGADGFYKVDHDYVLQLAQAAKEK 121 (238)
T ss_pred ecccccccccCceEeechHHHHHHHHHHHhC
Confidence 9998665445556666666667777877764
No 311
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=97.48 E-value=0.00024 Score=47.03 Aligned_cols=38 Identities=24% Similarity=0.297 Sum_probs=33.3
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCC
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERK 51 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~ 51 (125)
+++++++|+||+|.+|+.+++.|.+. +.+|.+++|+..
T Consensus 26 l~~~~vlVlGgtG~iG~~~a~~l~~~---g~~V~l~~R~~~ 63 (194)
T cd01078 26 LKGKTAVVLGGTGPVGQRAAVLLARE---GARVVLVGRDLE 63 (194)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC---CCEEEEEcCCHH
Confidence 46789999999999999999999987 689999988643
No 312
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=97.40 E-value=0.00025 Score=51.74 Aligned_cols=36 Identities=22% Similarity=0.281 Sum_probs=31.2
Q ss_pred CceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCC
Q psy897 13 DGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERK 51 (125)
Q Consensus 13 ~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~ 51 (125)
+++++|.|+ |++|+.+++.|+++ +..+|++.+|+..
T Consensus 1 m~~ilviGa-G~Vg~~va~~la~~--~d~~V~iAdRs~~ 36 (389)
T COG1748 1 MMKILVIGA-GGVGSVVAHKLAQN--GDGEVTIADRSKE 36 (389)
T ss_pred CCcEEEECC-chhHHHHHHHHHhC--CCceEEEEeCCHH
Confidence 478999998 99999999999998 1289999999765
No 313
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=97.33 E-value=0.00064 Score=41.69 Aligned_cols=35 Identities=26% Similarity=0.560 Sum_probs=27.3
Q ss_pred eEEEecCccchhHHHHHHHHHhCCCccEEEEEecCC
Q psy897 15 VIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRER 50 (125)
Q Consensus 15 ~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~ 50 (125)
+|.|+|+||++|+.|++.|.+. |....+.++.+..
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~h-p~~e~~~~~~~~~ 35 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEH-PDFELVALVSSSR 35 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHT-STEEEEEEEESTT
T ss_pred CEEEECCCCHHHHHHHHHHhcC-CCccEEEeeeecc
Confidence 6899999999999999999886 5534455555555
No 314
>TIGR01759 MalateDH-SF1 malate dehydrogenase. This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.
Probab=97.25 E-value=0.008 Score=43.12 Aligned_cols=102 Identities=15% Similarity=0.010 Sum_probs=62.2
Q ss_pred ceEEEecCccchhHHHHHHHHHhCCCcc-----EEEEEecCCCC--CC-HHHHHHHhhhccCChhh--hhh--hhcCccC
Q psy897 14 GVIFLTGGTGFMGKVLLDTLLRRFPSIH-----SIYILVRERKG--VS-PQERIEKMLDNEGPIFK--DFA--NLVRLKT 81 (125)
Q Consensus 14 ~~vlitG~~G~iG~~i~~~l~~~~~~~~-----~v~~~~r~~~~--~~-~~~~~~~~~~~~~~~~~--~l~--~~~~l~~ 81 (125)
-+|.|+|++|.+|+.++..|.... -.. +++.+|..+.. .. ....+.+... +... .+. +..++..
T Consensus 4 ~KV~IIGa~G~VG~~~a~~l~~~~-~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~---~~~~~~~i~~~~~~~~~d 79 (323)
T TIGR01759 4 VRVAVTGAAGQIGYSLLFRIASGE-LFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAF---PLLAGVVATTDPEEAFKD 79 (323)
T ss_pred eEEEEECCCcHHHHHHHHHHHhCC-cccCCCccEEEEEecCCcccccchHHHHHhhccc---cccCCcEEecChHHHhCC
Confidence 479999999999999999988761 113 78888885432 11 1112222110 1111 111 1112224
Q ss_pred CCeEEEeccccCc-chhHHHHhHhhHHHHHHHHHHHhhC
Q psy897 82 QRIRFIFLATLRF-DEELKIAIRTNICATQTVVKLAKQC 119 (125)
Q Consensus 82 ~~~Vih~a~~~~~-~~~~~~~~~~Nv~g~~~l~~~~~~~ 119 (125)
.|+||.+||..+- .++-...++.|..-...+.+.+++.
T Consensus 80 aDvVVitAG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~ 118 (323)
T TIGR01759 80 VDAALLVGAFPRKPGMERADLLSKNGKIFKEQGKALNKV 118 (323)
T ss_pred CCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhh
Confidence 4799999998642 2455567788998888888877665
No 315
>COG0623 FabI Enoyl-[acyl-carrier-protein]
Probab=97.16 E-value=0.0074 Score=41.22 Aligned_cols=38 Identities=8% Similarity=0.098 Sum_probs=31.6
Q ss_pred ccCCceEEEec--CccchhHHHHHHHHHhCCCccEEEEEecCC
Q psy897 10 FYKDGVIFLTG--GTGFMGKVLLDTLLRRFPSIHSIYILVRER 50 (125)
Q Consensus 10 ~~~~~~vlitG--~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~ 50 (125)
+++||++||+| -+.-|++.|++.|.+. |.++...-..+
T Consensus 3 ~L~GK~~lI~Gvan~rSIAwGIAk~l~~~---GAeL~fTy~~e 42 (259)
T COG0623 3 LLEGKRILIMGVANNRSIAWGIAKALAEQ---GAELAFTYQGE 42 (259)
T ss_pred ccCCceEEEEEecccccHHHHHHHHHHHc---CCEEEEEeccH
Confidence 46899999999 5668999999999998 78888765543
No 316
>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=97.14 E-value=0.0011 Score=45.08 Aligned_cols=80 Identities=10% Similarity=0.071 Sum_probs=49.2
Q ss_pred HHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhccCCh--hhhhhhhc-Cc-cCCCeEEEeccccCcchhHHHHhHh
Q psy897 29 LLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDNEGPI--FKDFANLV-RL-KTQRIRFIFLATLRFDEELKIAIRT 104 (125)
Q Consensus 29 i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~-~l-~~~~~Vih~a~~~~~~~~~~~~~~~ 104 (125)
+++.|+++ |++|++++|+..... ...+.. .++ .+++.... .+ ...|+|||+||.... .+++..+++
T Consensus 1 ~a~~l~~~---G~~Vv~~~r~~~~~~----~~~~~~--~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~~-~~~~~~~~v 70 (241)
T PRK12428 1 TARLLRFL---GARVIGVDRREPGMT----LDGFIQ--ADLGDPASIDAAVAALPGRIDALFNIAGVPGT-APVELVARV 70 (241)
T ss_pred ChHHHHhC---CCEEEEEeCCcchhh----hhHhhc--ccCCCHHHHHHHHHHhcCCCeEEEECCCCCCC-CCHHHhhhh
Confidence 35778877 799999999765321 111111 111 11111100 00 012899999998643 467888999
Q ss_pred hHHHHHHHHHHHhh
Q psy897 105 NICATQTVVKLAKQ 118 (125)
Q Consensus 105 Nv~g~~~l~~~~~~ 118 (125)
|+.++..+++++..
T Consensus 71 N~~~~~~l~~~~~~ 84 (241)
T PRK12428 71 NFLGLRHLTEALLP 84 (241)
T ss_pred chHHHHHHHHHHHH
Confidence 99999999998754
No 317
>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.10 E-value=0.0072 Score=43.33 Aligned_cols=103 Identities=16% Similarity=0.048 Sum_probs=61.3
Q ss_pred CceEEEecCccchhHHHHHHHHHhCCCcc-----EEEEEecCCCC--C-CHHHHHHHhhhccCChhh--hhh--hhcCcc
Q psy897 13 DGVIFLTGGTGFMGKVLLDTLLRRFPSIH-----SIYILVRERKG--V-SPQERIEKMLDNEGPIFK--DFA--NLVRLK 80 (125)
Q Consensus 13 ~~~vlitG~~G~iG~~i~~~l~~~~~~~~-----~v~~~~r~~~~--~-~~~~~~~~~~~~~~~~~~--~l~--~~~~l~ 80 (125)
.++|.|+|++|.+|+.++..|+...- .. +++++|..+.. . .....+.+... +... .+. +..++.
T Consensus 2 p~KV~IiGa~G~VG~~~a~~l~~~~~-~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~---~~~~~~~i~~~~~~~~~ 77 (322)
T cd01338 2 PVRVAVTGAAGQIGYSLLFRIASGEM-FGPDQPVILQLLELPQALKALEGVAMELEDCAF---PLLAEIVITDDPNVAFK 77 (322)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhccc-cCCCCceEEEEEecCCcccccceeehhhhhccc---cccCceEEecCcHHHhC
Confidence 36899999999999999999887510 12 78888885432 1 11112222110 1100 011 111222
Q ss_pred CCCeEEEeccccCcc-hhHHHHhHhhHHHHHHHHHHHhhC
Q psy897 81 TQRIRFIFLATLRFD-EELKIAIRTNICATQTVVKLAKQC 119 (125)
Q Consensus 81 ~~~~Vih~a~~~~~~-~~~~~~~~~Nv~g~~~l~~~~~~~ 119 (125)
..|+||.+||..+-. ++-...++.|+.-...+.+..++.
T Consensus 78 daDivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~ 117 (322)
T cd01338 78 DADWALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDV 117 (322)
T ss_pred CCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhh
Confidence 447999999986432 344556788988888888876654
No 318
>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity. The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox
Probab=97.08 E-value=0.0067 Score=43.22 Aligned_cols=103 Identities=15% Similarity=0.117 Sum_probs=58.5
Q ss_pred ceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCC--CCCC-HHHHHHHhhhccCChhhhhh---hhcCccCCCeEEE
Q psy897 14 GVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRER--KGVS-PQERIEKMLDNEGPIFKDFA---NLVRLKTQRIRFI 87 (125)
Q Consensus 14 ~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~--~~~~-~~~~~~~~~~~~~~~~~~l~---~~~~l~~~~~Vih 87 (125)
++|.|+|++|.+|+.++..|+.... ..+|+++++.+ +... ....+.+.... ......+. +...+...|+||-
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~~~g~-~~~v~lvd~~~~~~~l~~~~~dl~d~~~~-~~~~~~i~~~~d~~~l~~aDiVii 78 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKEDV-VKEINLISRPKSLEKLKGLRLDIYDALAA-AGIDAEIKISSDLSDVAGSDIVII 78 (309)
T ss_pred CEEEEECCCChHHHHHHHHHHhCCC-CCEEEEEECcccccccccccchhhhchhc-cCCCcEEEECCCHHHhCCCCEEEE
Confidence 5799999999999999999988711 13689999854 2111 11111111000 00000111 1111224479999
Q ss_pred eccccCcc-hhHHHHhHhhHHHHHHHHHHHhh
Q psy897 88 FLATLRFD-EELKIAIRTNICATQTVVKLAKQ 118 (125)
Q Consensus 88 ~a~~~~~~-~~~~~~~~~Nv~g~~~l~~~~~~ 118 (125)
++|...-. .+....++.|+.-...+.+...+
T Consensus 79 tag~p~~~~~~r~dl~~~n~~i~~~~~~~i~~ 110 (309)
T cd05294 79 TAGVPRKEGMSRLDLAKKNAKIVKKYAKQIAE 110 (309)
T ss_pred ecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 99976432 23345667788877777776544
No 319
>PRK00066 ldh L-lactate dehydrogenase; Reviewed
Probab=97.01 E-value=0.013 Score=41.95 Aligned_cols=102 Identities=11% Similarity=0.085 Sum_probs=60.5
Q ss_pred CceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCC-HHHHHHHhhhccCChhhhhh--hhcCccCCCeEEEec
Q psy897 13 DGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVS-PQERIEKMLDNEGPIFKDFA--NLVRLKTQRIRFIFL 89 (125)
Q Consensus 13 ~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~l~--~~~~l~~~~~Vih~a 89 (125)
+++|.|+|+ |.+|+.++..|+.. +-..++.+++++..... ....+.+... ....-.+. +...++..|+||-+|
T Consensus 6 ~~ki~iiGa-G~vG~~~a~~l~~~-~~~~el~L~D~~~~~~~g~~~Dl~~~~~--~~~~~~i~~~~~~~~~~adivIita 81 (315)
T PRK00066 6 HNKVVLVGD-GAVGSSYAYALVNQ-GIADELVIIDINKEKAEGDAMDLSHAVP--FTSPTKIYAGDYSDCKDADLVVITA 81 (315)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhc-CCCCEEEEEeCCCchhHHHHHHHHhhcc--ccCCeEEEeCCHHHhCCCCEEEEec
Confidence 579999998 99999999998887 11237999998665321 1112222111 00000111 011222447999999
Q ss_pred cccCc-chhHHHHhHhhHHHHHHHHHHHhh
Q psy897 90 ATLRF-DEELKIAIRTNICATQTVVKLAKQ 118 (125)
Q Consensus 90 ~~~~~-~~~~~~~~~~Nv~g~~~l~~~~~~ 118 (125)
|..+- ..+-...++.|..-...+++..++
T Consensus 82 g~~~k~g~~R~dll~~N~~i~~~i~~~i~~ 111 (315)
T PRK00066 82 GAPQKPGETRLDLVEKNLKIFKSIVGEVMA 111 (315)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 98642 234455667888877777766554
No 320
>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.01 E-value=0.0091 Score=42.61 Aligned_cols=103 Identities=11% Similarity=0.033 Sum_probs=60.1
Q ss_pred ceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhccCChhhhhhh---hcCccCCCeEEEecc
Q psy897 14 GVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDNEGPIFKDFAN---LVRLKTQRIRFIFLA 90 (125)
Q Consensus 14 ~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~l~~~~~Vih~a~ 90 (125)
++|.|+|++|.+|+.++..|... +-..++.++|.+ ........+.+.... ..+.....+ ..+++..|+||-+||
T Consensus 1 ~KI~IIGaaG~VG~~~a~~l~~~-~~~~elvLiDi~-~a~g~alDL~~~~~~-~~i~~~~~~~~~y~~~~daDivvitaG 77 (310)
T cd01337 1 VKVAVLGAAGGIGQPLSLLLKLN-PLVSELALYDIV-NTPGVAADLSHINTP-AKVTGYLGPEELKKALKGADVVVIPAG 77 (310)
T ss_pred CEEEEECCCCHHHHHHHHHHHhC-CCCcEEEEEecC-ccceeehHhHhCCCc-ceEEEecCCCchHHhcCCCCEEEEeCC
Confidence 47999999999999999988776 112588888876 211111122221110 011100000 112324479999999
Q ss_pred ccCc-chhHHHHhHhhHHHHHHHHHHHhhC
Q psy897 91 TLRF-DEELKIAIRTNICATQTVVKLAKQC 119 (125)
Q Consensus 91 ~~~~-~~~~~~~~~~Nv~g~~~l~~~~~~~ 119 (125)
..+- .+.-...++.|..-...+.+..++.
T Consensus 78 ~~~k~g~tR~dll~~N~~i~~~i~~~i~~~ 107 (310)
T cd01337 78 VPRKPGMTRDDLFNINAGIVRDLATAVAKA 107 (310)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 8642 2344566678888777777766553
No 321
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=96.90 E-value=0.00098 Score=48.61 Aligned_cols=34 Identities=24% Similarity=0.398 Sum_probs=25.9
Q ss_pred EEEecCccchhHHHHHHHHHhCCCccEEEEEecCCC
Q psy897 16 IFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERK 51 (125)
Q Consensus 16 vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~ 51 (125)
|+|.|+ |++|+.+++.|.+.. +..+|.+.+|+..
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~-~~~~v~va~r~~~ 34 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRG-PFEEVTVADRNPE 34 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTT-CE-EEEEEESSHH
T ss_pred CEEEcC-cHHHHHHHHHHhcCC-CCCcEEEEECCHH
Confidence 789999 999999999999982 2128999999665
No 322
>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional
Probab=96.89 E-value=0.00088 Score=50.23 Aligned_cols=78 Identities=8% Similarity=0.140 Sum_probs=47.1
Q ss_pred cCCceEEEecC----------------ccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHh-hhccCChhhhh
Q psy897 11 YKDGVIFLTGG----------------TGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKM-LDNEGPIFKDF 73 (125)
Q Consensus 11 ~~~~~vlitG~----------------~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~l 73 (125)
++||+|+||+| ||-+|.+|++++..+ |.+|+++.-+..... ...+..+ .....+.++.+
T Consensus 254 l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~---GA~VtlI~Gp~~~~~-p~~v~~i~V~ta~eM~~av 329 (475)
T PRK13982 254 LAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAA---GAEVTLISGPVDLAD-PQGVKVIHVESARQMLAAV 329 (475)
T ss_pred cCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHC---CCcEEEEeCCcCCCC-CCCceEEEecCHHHHHHHH
Confidence 68999999975 689999999999999 899998864321100 0001000 00001122222
Q ss_pred hhhcCccCCCeEEEeccccCcc
Q psy897 74 ANLVRLKTQRIRFIFLATLRFD 95 (125)
Q Consensus 74 ~~~~~l~~~~~Vih~a~~~~~~ 95 (125)
.+... .|++|++||..+|.
T Consensus 330 ~~~~~---~Di~I~aAAVaDyr 348 (475)
T PRK13982 330 EAALP---ADIAIFAAAVADWR 348 (475)
T ss_pred HhhCC---CCEEEEecccccee
Confidence 22212 28999999998765
No 323
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=96.89 E-value=0.015 Score=41.28 Aligned_cols=102 Identities=14% Similarity=0.138 Sum_probs=59.3
Q ss_pred ceEEEecCccchhHHHHHHHHHhCCCc--cEEEEEecCCCCCC-HHHHHHHhhhcc-CChhhhhhhhcCccCCCeEEEec
Q psy897 14 GVIFLTGGTGFMGKVLLDTLLRRFPSI--HSIYILVRERKGVS-PQERIEKMLDNE-GPIFKDFANLVRLKTQRIRFIFL 89 (125)
Q Consensus 14 ~~vlitG~~G~iG~~i~~~l~~~~~~~--~~v~~~~r~~~~~~-~~~~~~~~~~~~-~~~~~~l~~~~~l~~~~~Vih~a 89 (125)
++|.|.|+ |.+|+.++..|+.. + .+|.++++++.... ....+.+..... ....-...+...+...|+||+++
T Consensus 1 ~kI~IIGa-G~vG~~~a~~l~~~---g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~~~~~~l~~aDIVIita 76 (306)
T cd05291 1 RKVVIIGA-GHVGSSFAYSLVNQ---GIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKAGDYSDCKDADIVVITA 76 (306)
T ss_pred CEEEEECC-CHHHHHHHHHHHhc---CCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEcCCHHHhCCCCEEEEcc
Confidence 36889985 99999999999887 4 58999999765321 111222211100 00000000001122347999999
Q ss_pred cccCcc-hhHHHHhHhhHHHHHHHHHHHhhC
Q psy897 90 ATLRFD-EELKIAIRTNICATQTVVKLAKQC 119 (125)
Q Consensus 90 ~~~~~~-~~~~~~~~~Nv~g~~~l~~~~~~~ 119 (125)
|..+-. .+-...++.|..-...+.+..++.
T Consensus 77 g~~~~~g~~R~dll~~N~~i~~~~~~~i~~~ 107 (306)
T cd05291 77 GAPQKPGETRLDLLEKNAKIMKSIVPKIKAS 107 (306)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 986322 334456677887777777766653
No 324
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=96.87 E-value=0.0015 Score=45.28 Aligned_cols=34 Identities=21% Similarity=0.278 Sum_probs=30.4
Q ss_pred ceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCC
Q psy897 14 GVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERK 51 (125)
Q Consensus 14 ~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~ 51 (125)
|+|||+||||. |+.|++.|.+. +++|++..+...
T Consensus 1 m~ILvlGGT~e-gr~la~~L~~~---g~~v~~s~~t~~ 34 (256)
T TIGR00715 1 MTVLLMGGTVD-SRAIAKGLIAQ---GIEILVTVTTSE 34 (256)
T ss_pred CeEEEEechHH-HHHHHHHHHhC---CCeEEEEEccCC
Confidence 57999999999 99999999988 799999888654
No 325
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=96.85 E-value=0.0022 Score=40.16 Aligned_cols=39 Identities=18% Similarity=0.215 Sum_probs=32.9
Q ss_pred ccCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCC
Q psy897 10 FYKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERK 51 (125)
Q Consensus 10 ~~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~ 51 (125)
-+++++++|.|+ |.+|+.++..|.+. +..+|+++.|+..
T Consensus 9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~--g~~~i~i~nRt~~ 47 (135)
T PF01488_consen 9 DLKGKRVLVIGA-GGAARAVAAALAAL--GAKEITIVNRTPE 47 (135)
T ss_dssp TGTTSEEEEESS-SHHHHHHHHHHHHT--TSSEEEEEESSHH
T ss_pred CcCCCEEEEECC-HHHHHHHHHHHHHc--CCCEEEEEECCHH
Confidence 467899999997 88999999999998 3456999999654
No 326
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=96.78 E-value=0.0025 Score=44.94 Aligned_cols=36 Identities=14% Similarity=0.022 Sum_probs=31.1
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCcc-EEEEEecCC
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIH-SIYILVRER 50 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~-~v~~~~r~~ 50 (125)
+++|+++|+|+ |++|++++..|.+. |. +|++++|+.
T Consensus 124 ~~~k~vlI~GA-GGagrAia~~La~~---G~~~V~I~~R~~ 160 (289)
T PRK12548 124 VKGKKLTVIGA-GGAATAIQVQCALD---GAKEITIFNIKD 160 (289)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHC---CCCEEEEEeCCc
Confidence 45789999999 89999999999988 55 599999975
No 327
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=96.73 E-value=0.003 Score=42.65 Aligned_cols=35 Identities=34% Similarity=0.277 Sum_probs=30.9
Q ss_pred ceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCC
Q psy897 14 GVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERK 51 (125)
Q Consensus 14 ~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~ 51 (125)
|+|.|+||+|.+|+.++..|.+. +++|.+.+|++.
T Consensus 1 MkI~IIGG~G~mG~ala~~L~~~---G~~V~v~~r~~~ 35 (219)
T TIGR01915 1 MKIAVLGGTGDQGKGLALRLAKA---GNKIIIGSRDLE 35 (219)
T ss_pred CEEEEEcCCCHHHHHHHHHHHhC---CCEEEEEEcCHH
Confidence 47999999999999999999988 789998888654
No 328
>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional
Probab=96.72 E-value=0.0038 Score=44.90 Aligned_cols=38 Identities=24% Similarity=0.384 Sum_probs=29.1
Q ss_pred CceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCC
Q psy897 13 DGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRER 50 (125)
Q Consensus 13 ~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~ 50 (125)
+++|+|.||+|++|..+++.|.++.....++..+.+..
T Consensus 1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~ 38 (334)
T PRK14874 1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASAR 38 (334)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccc
Confidence 36899999999999999999988622235667776643
No 329
>cd05295 MDH_like Malate dehydrogenase-like. These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=96.68 E-value=0.018 Score=43.10 Aligned_cols=108 Identities=16% Similarity=0.082 Sum_probs=59.6
Q ss_pred CceEEEecCccchhHHHHHHHHH---hCCC-ccEEEEEecCCCCCCHHHHHHHhhhccCChhhh--hh--hhcCccCCCe
Q psy897 13 DGVIFLTGGTGFMGKVLLDTLLR---RFPS-IHSIYILVRERKGVSPQERIEKMLDNEGPIFKD--FA--NLVRLKTQRI 84 (125)
Q Consensus 13 ~~~vlitG~~G~iG~~i~~~l~~---~~~~-~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~--l~--~~~~l~~~~~ 84 (125)
--+|+||||+|.||++|+..+++ .+++ ...+++++.++......-..-++.+...++... +. +..++...|+
T Consensus 123 p~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i~~~~~ea~~daDv 202 (452)
T cd05295 123 PLQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISVTTDLDVAFKDAHV 202 (452)
T ss_pred ceEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEEEECCHHHhCCCCE
Confidence 35799999999999999999887 1122 234555565322221111111222210011111 11 0112224479
Q ss_pred EEEeccccCcc-hhHHHHhHhhHHHHHHHHHHHhhCC
Q psy897 85 RFIFLATLRFD-EELKIAIRTNICATQTVVKLAKQCP 120 (125)
Q Consensus 85 Vih~a~~~~~~-~~~~~~~~~Nv~g~~~l~~~~~~~~ 120 (125)
||-+||..+-. .+-...++.|..-...+.+...+..
T Consensus 203 vIitag~prk~G~~R~DLL~~N~~Ifk~~g~~I~~~a 239 (452)
T cd05295 203 IVLLDDFLIKEGEDLEGCIRSRVAICQLYGPLIEKNA 239 (452)
T ss_pred EEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999986432 3445566788888777777766544
No 330
>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.66 E-value=0.0095 Score=44.24 Aligned_cols=37 Identities=11% Similarity=0.080 Sum_probs=31.9
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCC
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERK 51 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~ 51 (125)
+.+|+++|||++| +|.++++.|++. |++|.+.++...
T Consensus 3 ~~~k~v~v~G~g~-~G~s~a~~l~~~---G~~V~~~d~~~~ 39 (447)
T PRK02472 3 YQNKKVLVLGLAK-SGYAAAKLLHKL---GANVTVNDGKPF 39 (447)
T ss_pred cCCCEEEEEeeCH-HHHHHHHHHHHC---CCEEEEEcCCCc
Confidence 3578999999988 999999999988 899999987543
No 331
>PRK05442 malate dehydrogenase; Provisional
Probab=96.63 E-value=0.03 Score=40.28 Aligned_cols=103 Identities=16% Similarity=0.058 Sum_probs=61.7
Q ss_pred CCceEEEecCccchhHHHHHHHHHhCCCcc-----EEEEEecCCCC---CCHHHHHHHhhhccCChhh--hhh--hhcCc
Q psy897 12 KDGVIFLTGGTGFMGKVLLDTLLRRFPSIH-----SIYILVRERKG---VSPQERIEKMLDNEGPIFK--DFA--NLVRL 79 (125)
Q Consensus 12 ~~~~vlitG~~G~iG~~i~~~l~~~~~~~~-----~v~~~~r~~~~---~~~~~~~~~~~~~~~~~~~--~l~--~~~~l 79 (125)
+.++|.|+|++|.+|+.++..|....- .. +++.+|..+.. ......+.+... +... .+. +..++
T Consensus 3 ~~~KV~IiGaaG~VG~~~a~~l~~~~~-~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~---~~~~~~~i~~~~y~~~ 78 (326)
T PRK05442 3 APVRVAVTGAAGQIGYSLLFRIASGDM-LGKDQPVILQLLEIPPALKALEGVVMELDDCAF---PLLAGVVITDDPNVAF 78 (326)
T ss_pred CCcEEEEECCCcHHHHHHHHHHHhhhh-cCCCCccEEEEEecCCcccccceeehhhhhhhh---hhcCCcEEecChHHHh
Confidence 346899999999999999998877510 12 78888875432 111112222110 1000 111 01122
Q ss_pred cCCCeEEEeccccCc-chhHHHHhHhhHHHHHHHHHHHhh
Q psy897 80 KTQRIRFIFLATLRF-DEELKIAIRTNICATQTVVKLAKQ 118 (125)
Q Consensus 80 ~~~~~Vih~a~~~~~-~~~~~~~~~~Nv~g~~~l~~~~~~ 118 (125)
...|+||-+||..+- .++-...++.|..-...+.+..++
T Consensus 79 ~daDiVVitaG~~~k~g~tR~dll~~Na~i~~~i~~~i~~ 118 (326)
T PRK05442 79 KDADVALLVGARPRGPGMERKDLLEANGAIFTAQGKALNE 118 (326)
T ss_pred CCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 244788889997632 345566778899888888887766
No 332
>KOG2733|consensus
Probab=96.61 E-value=0.0017 Score=46.86 Aligned_cols=79 Identities=24% Similarity=0.349 Sum_probs=47.0
Q ss_pred eEEEecCccchhHHHHHHHHHh-CCCccEEEEEecCCCCCCHHHHHHHhhhcc-CC------hhhhhhhhcCcc----CC
Q psy897 15 VIFLTGGTGFMGKVLLDTLLRR-FPSIHSIYILVRERKGVSPQERIEKMLDNE-GP------IFKDFANLVRLK----TQ 82 (125)
Q Consensus 15 ~vlitG~~G~iG~~i~~~l~~~-~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~-~~------~~~~l~~~~~l~----~~ 82 (125)
.++|.||+||-|.++++++.+. ..++..+.+..|++.+. ++.++....+. .+ +..|..++..+. ..
T Consensus 7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL--~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak~~ 84 (423)
T KOG2733|consen 7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKL--QEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAKQA 84 (423)
T ss_pred eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHH--HHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHhhh
Confidence 4799999999999999999882 01257888888876632 11222211110 11 112333332332 23
Q ss_pred CeEEEeccccCcc
Q psy897 83 RIRFIFLATLRFD 95 (125)
Q Consensus 83 ~~Vih~a~~~~~~ 95 (125)
.+|+||+|+.++.
T Consensus 85 ~vivN~vGPyR~h 97 (423)
T KOG2733|consen 85 RVIVNCVGPYRFH 97 (423)
T ss_pred EEEEeccccceec
Confidence 4999999997654
No 333
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=96.60 E-value=0.013 Score=38.19 Aligned_cols=37 Identities=19% Similarity=0.305 Sum_probs=32.4
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCC
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRER 50 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~ 50 (125)
+.+++++|.|+++.+|..+++.|.+. +.+|.++.|..
T Consensus 42 l~gk~vlViG~G~~~G~~~a~~L~~~---g~~V~v~~r~~ 78 (168)
T cd01080 42 LAGKKVVVVGRSNIVGKPLAALLLNR---NATVTVCHSKT 78 (168)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHhhC---CCEEEEEECCc
Confidence 67899999999888899999999988 67898888864
No 334
>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated
Probab=96.59 E-value=0.0069 Score=43.77 Aligned_cols=34 Identities=26% Similarity=0.391 Sum_probs=27.4
Q ss_pred CceEEEecCccchhHHHHHHHHHhCCCccEEEEEec
Q psy897 13 DGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVR 48 (125)
Q Consensus 13 ~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r 48 (125)
+++|.|.|++|++|+.+++.|.+. |+ .++..+.+
T Consensus 2 m~kVaIiGAtG~vG~~l~~~L~~~-p~-~elv~v~~ 35 (343)
T PRK00436 2 MIKVGIVGASGYTGGELLRLLLNH-PE-VEIVAVTS 35 (343)
T ss_pred CeEEEEECCCCHHHHHHHHHHHcC-CC-ceEEEEEC
Confidence 368999999999999999999876 43 67666544
No 335
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.58 E-value=0.011 Score=41.58 Aligned_cols=35 Identities=17% Similarity=0.213 Sum_probs=31.7
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEec
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVR 48 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r 48 (125)
+.+|+++|.|.+|.+|+.++..|++. +..|.++.+
T Consensus 157 l~Gk~vvViG~gg~vGkpia~~L~~~---gatVtv~~~ 191 (283)
T PRK14192 157 LAGKHAVVVGRSAILGKPMAMMLLNA---NATVTICHS 191 (283)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHhC---CCEEEEEeC
Confidence 57899999999999999999999988 678888877
No 336
>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent. Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.
Probab=96.42 E-value=0.026 Score=40.31 Aligned_cols=102 Identities=12% Similarity=0.051 Sum_probs=59.2
Q ss_pred eEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhccCChhhhh-hh--hcCccCCCeEEEeccc
Q psy897 15 VIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDNEGPIFKDF-AN--LVRLKTQRIRFIFLAT 91 (125)
Q Consensus 15 ~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~l-~~--~~~l~~~~~Vih~a~~ 91 (125)
+|.|+|++|.+|+.++..|... +-..++.++|.++.. .....+.+.... ..+.... .+ ...++..|+||-+||.
T Consensus 1 KV~IiGaaG~VG~~~a~~l~~~-~~~~elvL~Di~~a~-g~a~DL~~~~~~-~~i~~~~~~~~~~~~~~daDivvitaG~ 77 (312)
T TIGR01772 1 KVAVLGAAGGIGQPLSLLLKLQ-PYVSELSLYDIAGAA-GVAADLSHIPTA-ASVKGFSGEEGLENALKGADVVVIPAGV 77 (312)
T ss_pred CEEEECCCCHHHHHHHHHHHhC-CCCcEEEEecCCCCc-EEEchhhcCCcC-ceEEEecCCCchHHHcCCCCEEEEeCCC
Confidence 5889999999999999998876 223588999886622 111122221110 0111000 00 1123244799999998
Q ss_pred cCcc-hhHHHHhHhhHHHHHHHHHHHhhC
Q psy897 92 LRFD-EELKIAIRTNICATQTVVKLAKQC 119 (125)
Q Consensus 92 ~~~~-~~~~~~~~~Nv~g~~~l~~~~~~~ 119 (125)
.+-. .+-...++.|..-...+.+..++.
T Consensus 78 ~~~~g~~R~dll~~N~~I~~~i~~~i~~~ 106 (312)
T TIGR01772 78 PRKPGMTRDDLFNVNAGIVKDLVAAVAES 106 (312)
T ss_pred CCCCCccHHHHHHHhHHHHHHHHHHHHHh
Confidence 6432 344556678887777777665543
No 337
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=96.33 E-value=0.0083 Score=42.05 Aligned_cols=37 Identities=24% Similarity=0.266 Sum_probs=32.1
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCc-cEEEEEecCCC
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSI-HSIYILVRERK 51 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~-~~v~~~~r~~~ 51 (125)
+++++++|+|+ |.+|++++..|... + .+|++++|+..
T Consensus 121 ~~~k~vlVlGa-Gg~a~ai~~aL~~~---g~~~V~v~~R~~~ 158 (278)
T PRK00258 121 LKGKRILILGA-GGAARAVILPLLDL---GVAEITIVNRTVE 158 (278)
T ss_pred CCCCEEEEEcC-cHHHHHHHHHHHHc---CCCEEEEEeCCHH
Confidence 45789999987 99999999999988 5 79999999654
No 338
>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=96.27 E-value=0.0085 Score=43.37 Aligned_cols=35 Identities=20% Similarity=0.334 Sum_probs=28.1
Q ss_pred CceEEEecCccchhHHHHHHHHHhCCCccEEEEEecC
Q psy897 13 DGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRE 49 (125)
Q Consensus 13 ~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~ 49 (125)
..+|.|+||+|++|+.+++.|.+. |. .++..+.++
T Consensus 3 ~~~V~I~GatG~iG~~l~~~L~~~-p~-~el~~~~~s 37 (349)
T PRK08664 3 KLKVGILGATGMVGQRFVQLLANH-PW-FEVTALAAS 37 (349)
T ss_pred CcEEEEECCCCHHHHHHHHHHHcC-CC-ceEEEEEcC
Confidence 368999999999999999998875 33 577777443
No 339
>PTZ00117 malate dehydrogenase; Provisional
Probab=96.24 E-value=0.097 Score=37.50 Aligned_cols=103 Identities=13% Similarity=0.089 Sum_probs=55.8
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHH-HHHHhhhccCChhhhhh---hhcCccCCCeEE
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQE-RIEKMLDNEGPIFKDFA---NLVRLKTQRIRF 86 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~l~---~~~~l~~~~~Vi 86 (125)
.+.++|.|+|+ |.+|+.++..++.. +..+++++|.++....... .+.+... .......+. +...+...|+||
T Consensus 3 ~~~~KI~IIGa-G~vG~~ia~~l~~~--~~~~l~L~Di~~~~~~g~~lDl~~~~~-~~~~~~~i~~~~d~~~l~~ADiVV 78 (319)
T PTZ00117 3 VKRKKISMIGA-GQIGSTVALLILQK--NLGDVVLYDVIKGVPQGKALDLKHFST-LVGSNINILGTNNYEDIKDSDVVV 78 (319)
T ss_pred CCCcEEEEECC-CHHHHHHHHHHHHC--CCCeEEEEECCCccchhHHHHHhhhcc-ccCCCeEEEeCCCHHHhCCCCEEE
Confidence 35678999997 99999999988776 2267888998765432111 1111111 000001111 101222447999
Q ss_pred EeccccCcc-hhHHHHhHhhHHHHHHHHHHHh
Q psy897 87 IFLATLRFD-EELKIAIRTNICATQTVVKLAK 117 (125)
Q Consensus 87 h~a~~~~~~-~~~~~~~~~Nv~g~~~l~~~~~ 117 (125)
.++|..... ......+..|..-...+.+...
T Consensus 79 itag~~~~~g~~r~dll~~n~~i~~~i~~~i~ 110 (319)
T PTZ00117 79 ITAGVQRKEEMTREDLLTINGKIMKSVAESVK 110 (319)
T ss_pred ECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 999876322 2233444566655555555443
No 340
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.24 E-value=0.0085 Score=44.55 Aligned_cols=36 Identities=14% Similarity=0.137 Sum_probs=32.3
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCC
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRER 50 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~ 50 (125)
+++|+++|+|+++ +|..+++.|++. |+.|.++++..
T Consensus 3 ~~~k~v~iiG~g~-~G~~~A~~l~~~---G~~V~~~d~~~ 38 (450)
T PRK14106 3 LKGKKVLVVGAGV-SGLALAKFLKKL---GAKVILTDEKE 38 (450)
T ss_pred cCCCEEEEECCCH-HHHHHHHHHHHC---CCEEEEEeCCc
Confidence 4679999999888 999999999999 89999998864
No 341
>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase
Probab=96.22 E-value=0.0087 Score=43.90 Aligned_cols=35 Identities=23% Similarity=0.464 Sum_probs=29.8
Q ss_pred CceEEEecCccchhHHHHHHHHHhCCCccEEEEEecC
Q psy897 13 DGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRE 49 (125)
Q Consensus 13 ~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~ 49 (125)
.++|.|.||||++|..|++.|.+. | ..++..+.+.
T Consensus 38 ~~kVaIvGATG~vG~eLlrlL~~h-P-~~el~~l~s~ 72 (381)
T PLN02968 38 KKRIFVLGASGYTGAEVRRLLANH-P-DFEITVMTAD 72 (381)
T ss_pred ccEEEEECCCChHHHHHHHHHHhC-C-CCeEEEEECh
Confidence 468999999999999999988887 4 4788888764
No 342
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=96.18 E-value=0.012 Score=39.39 Aligned_cols=38 Identities=16% Similarity=0.176 Sum_probs=32.1
Q ss_pred ccCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCC
Q psy897 10 FYKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERK 51 (125)
Q Consensus 10 ~~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~ 51 (125)
.+++|+++|+|. |-+|+++++.|.+. |++|++.++++.
T Consensus 25 ~l~gk~v~I~G~-G~vG~~~A~~L~~~---G~~Vvv~D~~~~ 62 (200)
T cd01075 25 SLEGKTVAVQGL-GKVGYKLAEHLLEE---GAKLIVADINEE 62 (200)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHC---CCEEEEEcCCHH
Confidence 367899999998 58999999999998 799998887543
No 343
>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional
Probab=96.12 E-value=0.01 Score=43.44 Aligned_cols=35 Identities=20% Similarity=0.346 Sum_probs=31.6
Q ss_pred CceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCC
Q psy897 13 DGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRER 50 (125)
Q Consensus 13 ~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~ 50 (125)
.++|.|.||.|.+|..++..|.+. |+.|.+.+++.
T Consensus 98 ~~~I~IiGG~GlmG~slA~~l~~~---G~~V~~~d~~~ 132 (374)
T PRK11199 98 LRPVVIVGGKGQLGRLFAKMLTLS---GYQVRILEQDD 132 (374)
T ss_pred cceEEEEcCCChhhHHHHHHHHHC---CCeEEEeCCCc
Confidence 478999999999999999999998 79999998854
No 344
>PTZ00082 L-lactate dehydrogenase; Provisional
Probab=96.10 E-value=0.14 Score=36.84 Aligned_cols=104 Identities=12% Similarity=0.054 Sum_probs=56.4
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHH-HHHHHhhhccCChhhhhh---hhcCccCCCeEE
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQ-ERIEKMLDNEGPIFKDFA---NLVRLKTQRIRF 86 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~l~---~~~~l~~~~~Vi 86 (125)
.+.++|.|.| +|.+|+.++..++.. +-..+++++.++...... ..+.+.... ......+. +...++..|+||
T Consensus 4 ~~~~KI~IIG-aG~vG~~ia~~la~~--gl~~i~LvDi~~~~~~~~~ld~~~~~~~-~~~~~~I~~~~d~~~l~~aDiVI 79 (321)
T PTZ00082 4 IKRRKISLIG-SGNIGGVMAYLIVLK--NLGDVVLFDIVKNIPQGKALDISHSNVI-AGSNSKVIGTNNYEDIAGSDVVI 79 (321)
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHhC--CCCeEEEEeCCCchhhHHHHHHHhhhhc-cCCCeEEEECCCHHHhCCCCEEE
Confidence 3457899999 699999999988776 224788888876642111 111111110 00000111 111222447999
Q ss_pred EeccccCcc-h-----hHHHHhHhhHHHHHHHHHHHhh
Q psy897 87 IFLATLRFD-E-----ELKIAIRTNICATQTVVKLAKQ 118 (125)
Q Consensus 87 h~a~~~~~~-~-----~~~~~~~~Nv~g~~~l~~~~~~ 118 (125)
.++|..+-. . +....+..|+.-...+.+...+
T Consensus 80 ~tag~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~ 117 (321)
T PTZ00082 80 VTAGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKK 117 (321)
T ss_pred ECCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 999875311 1 3344556676655555554443
No 345
>PRK08655 prephenate dehydrogenase; Provisional
Probab=96.10 E-value=0.0091 Score=44.53 Aligned_cols=35 Identities=29% Similarity=0.333 Sum_probs=31.0
Q ss_pred ceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCC
Q psy897 14 GVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERK 51 (125)
Q Consensus 14 ~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~ 51 (125)
|+|.|.||+|.+|..++..|.+. +++|.+++|++.
T Consensus 1 MkI~IIGG~G~mG~slA~~L~~~---G~~V~v~~r~~~ 35 (437)
T PRK08655 1 MKISIIGGTGGLGKWFARFLKEK---GFEVIVTGRDPK 35 (437)
T ss_pred CEEEEEecCCHHHHHHHHHHHHC---CCEEEEEECChH
Confidence 47999999999999999999988 789999988654
No 346
>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]
Probab=96.09 E-value=0.11 Score=37.12 Aligned_cols=102 Identities=13% Similarity=-0.004 Sum_probs=58.7
Q ss_pred ceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCC-HHHHHHHhhhccCChhhhhhh---hcCccCCCeEEEec
Q psy897 14 GVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVS-PQERIEKMLDNEGPIFKDFAN---LVRLKTQRIRFIFL 89 (125)
Q Consensus 14 ~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~l~~---~~~l~~~~~Vih~a 89 (125)
++|.|+|+ |.+|+.++..|+... -+.++++++....... ....+.+...- ......+.. ..+++..|+|+-.|
T Consensus 1 ~KVaviGa-G~VG~s~a~~l~~~~-~~~el~LiDi~~~~~~G~a~DL~~~~~~-~~~~~~i~~~~~y~~~~~aDiVvitA 77 (313)
T COG0039 1 MKVAVIGA-GNVGSSLAFLLLLQG-LGSELVLIDINEEKAEGVALDLSHAAAP-LGSDVKITGDGDYEDLKGADIVVITA 77 (313)
T ss_pred CeEEEECC-ChHHHHHHHHHhccc-ccceEEEEEcccccccchhcchhhcchh-ccCceEEecCCChhhhcCCCEEEEeC
Confidence 47999999 999999999997662 1358999998744321 11122221110 000011111 11222347999999
Q ss_pred cccCcc-hhHHHHhHhhHHHHHHHHHHHhh
Q psy897 90 ATLRFD-EELKIAIRTNICATQTVVKLAKQ 118 (125)
Q Consensus 90 ~~~~~~-~~~~~~~~~Nv~g~~~l~~~~~~ 118 (125)
|..+-. ..-...++.|..-...+.+...+
T Consensus 78 G~prKpGmtR~DLl~~Na~I~~~i~~~i~~ 107 (313)
T COG0039 78 GVPRKPGMTRLDLLEKNAKIVKDIAKAIAK 107 (313)
T ss_pred CCCCCCCCCHHHHHHhhHHHHHHHHHHHHh
Confidence 987432 23355667788777777665554
No 347
>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=96.08 E-value=0.17 Score=36.01 Aligned_cols=100 Identities=14% Similarity=0.158 Sum_probs=56.1
Q ss_pred ceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCHHHHHHHhhhccCChhh--hhh--hhcCccCCCeEEEec
Q psy897 14 GVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSPQERIEKMLDNEGPIFK--DFA--NLVRLKTQRIRFIFL 89 (125)
Q Consensus 14 ~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~--~l~--~~~~l~~~~~Vih~a 89 (125)
|+|.|.|+ |.+|..++..|+.... ..++.++++++.... ....++.+. .+... .+. +...+...|+||-++
T Consensus 1 mkI~IIGa-G~VG~~~a~~l~~~g~-~~ev~l~D~~~~~~~--g~a~dl~~~-~~~~~~~~i~~~d~~~l~~aDiViita 75 (308)
T cd05292 1 MKVAIVGA-GFVGSTTAYALLLRGL-ASEIVLVDINKAKAE--GEAMDLAHG-TPFVKPVRIYAGDYADCKGADVVVITA 75 (308)
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCC-CCEEEEEECCchhhh--hHHHHHHcc-ccccCCeEEeeCCHHHhCCCCEEEEcc
Confidence 46899998 9999999999988711 268999998765321 111112110 11100 000 001122347999999
Q ss_pred cccCc-chhHHHHhHhhHHHHHHHHHHHhh
Q psy897 90 ATLRF-DEELKIAIRTNICATQTVVKLAKQ 118 (125)
Q Consensus 90 ~~~~~-~~~~~~~~~~Nv~g~~~l~~~~~~ 118 (125)
+...- ..+.......|+.-...+.+..++
T Consensus 76 ~~~~~~~~~r~dl~~~n~~i~~~~~~~l~~ 105 (308)
T cd05292 76 GANQKPGETRLDLLKRNVAIFKEIIPQILK 105 (308)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 87532 233344556677766666665544
No 348
>PRK06223 malate dehydrogenase; Reviewed
Probab=96.07 E-value=0.13 Score=36.42 Aligned_cols=100 Identities=12% Similarity=0.025 Sum_probs=53.8
Q ss_pred CceEEEecCccchhHHHHHHHHHhCCCcc-EEEEEecCCCCCCHHH-HHHHhhhccCChhhhhhh---hcCccCCCeEEE
Q psy897 13 DGVIFLTGGTGFMGKVLLDTLLRRFPSIH-SIYILVRERKGVSPQE-RIEKMLDNEGPIFKDFAN---LVRLKTQRIRFI 87 (125)
Q Consensus 13 ~~~vlitG~~G~iG~~i~~~l~~~~~~~~-~v~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~l~~---~~~l~~~~~Vih 87 (125)
+++|.|.|+ |.+|+.++..++.. +. +|+++++++....... .+.+.... ......+.. ...+...|+||.
T Consensus 2 ~~KI~VIGa-G~vG~~ia~~la~~---~~~ev~L~D~~~~~~~~~~~dl~~~~~~-~~~~~~i~~~~d~~~~~~aDiVii 76 (307)
T PRK06223 2 RKKISIIGA-GNVGATLAHLLALK---ELGDVVLFDIVEGVPQGKALDIAEAAPV-EGFDTKITGTNDYEDIAGSDVVVI 76 (307)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhC---CCeEEEEEECCCchhHHHHHHHHhhhhh-cCCCcEEEeCCCHHHHCCCCEEEE
Confidence 468999998 99999999998876 33 8999998655321111 11111110 000011110 011223479999
Q ss_pred eccccCc-chhHHHHhHhhHHHHHHHHHHHh
Q psy897 88 FLATLRF-DEELKIAIRTNICATQTVVKLAK 117 (125)
Q Consensus 88 ~a~~~~~-~~~~~~~~~~Nv~g~~~l~~~~~ 117 (125)
+++...- ..+-.+.+..|+.-...+++...
T Consensus 77 ~~~~p~~~~~~r~~~~~~n~~i~~~i~~~i~ 107 (307)
T PRK06223 77 TAGVPRKPGMSRDDLLGINAKIMKDVAEGIK 107 (307)
T ss_pred CCCCCCCcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 9887531 12223344556655555555443
No 349
>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=96.03 E-value=0.15 Score=36.48 Aligned_cols=103 Identities=6% Similarity=0.009 Sum_probs=59.5
Q ss_pred CceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCC-HHHHHHHhhhccCChhhhhhh---hcCccCCCeEEEe
Q psy897 13 DGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVS-PQERIEKMLDNEGPIFKDFAN---LVRLKTQRIRFIF 88 (125)
Q Consensus 13 ~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~l~~---~~~l~~~~~Vih~ 88 (125)
.++|.|+|+ |.+|+.++..|+.. +-..++++++.+..... ....+.+...- ... ..+.. ...++..|+||-+
T Consensus 3 ~~Ki~IiGa-G~VG~~~a~~l~~~-~~~~el~LiD~~~~~~~g~a~Dl~~~~~~-~~~-~~v~~~~dy~~~~~adivvit 78 (312)
T cd05293 3 RNKVTVVGV-GQVGMACAISILAK-GLADELVLVDVVEDKLKGEAMDLQHGSAF-LKN-PKIEADKDYSVTANSKVVIVT 78 (312)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhc-CCCCEEEEEeCCccHHHHHHHHHHHhhcc-CCC-CEEEECCCHHHhCCCCEEEEC
Confidence 358999996 99999999988876 12367889988664221 11122221110 000 11211 1112244799999
Q ss_pred ccccCc-chhHHHHhHhhHHHHHHHHHHHhhC
Q psy897 89 LATLRF-DEELKIAIRTNICATQTVVKLAKQC 119 (125)
Q Consensus 89 a~~~~~-~~~~~~~~~~Nv~g~~~l~~~~~~~ 119 (125)
||..+- ..+-...++.|..-...+.+..++.
T Consensus 79 aG~~~k~g~~R~dll~~N~~i~~~~~~~i~~~ 110 (312)
T cd05293 79 AGARQNEGESRLDLVQRNVDIFKGIIPKLVKY 110 (312)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 997632 2334456677887777777766554
No 350
>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=96.01 E-value=0.017 Score=41.67 Aligned_cols=35 Identities=26% Similarity=0.332 Sum_probs=26.5
Q ss_pred ceEEEecCccchhHHHHHHHHHhCCCccEEEEEec
Q psy897 14 GVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVR 48 (125)
Q Consensus 14 ~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r 48 (125)
.+|.|+||||++|..+++.|.++......+..+..
T Consensus 5 ~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~s 39 (336)
T PRK05671 5 LDIAVVGATGTVGEALVQILEERDFPVGTLHLLAS 39 (336)
T ss_pred CEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEEC
Confidence 68999999999999999999964222355555543
No 351
>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed
Probab=95.99 E-value=0.028 Score=42.44 Aligned_cols=36 Identities=22% Similarity=0.325 Sum_probs=30.5
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCC
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRER 50 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~ 50 (125)
+.+++++|+|+ |.+|++++..|.+. |.+|.+.+|..
T Consensus 330 ~~~k~vlIiGa-GgiG~aia~~L~~~---G~~V~i~~R~~ 365 (477)
T PRK09310 330 LNNQHVAIVGA-GGAAKAIATTLARA---GAELLIFNRTK 365 (477)
T ss_pred cCCCEEEEEcC-cHHHHHHHHHHHHC---CCEEEEEeCCH
Confidence 45789999995 89999999999988 67888887754
No 352
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.96 E-value=0.046 Score=38.62 Aligned_cols=37 Identities=19% Similarity=0.272 Sum_probs=33.0
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCC
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRER 50 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~ 50 (125)
+.+++++|+|.++.+|+-++..|... +..|.++.+..
T Consensus 156 l~Gk~vvVIGrs~~VG~pla~lL~~~---gatVtv~~s~t 192 (286)
T PRK14175 156 LEGKNAVVIGRSHIVGQPVSKLLLQK---NASVTILHSRS 192 (286)
T ss_pred CCCCEEEEECCCchhHHHHHHHHHHC---CCeEEEEeCCc
Confidence 67899999999999999999999988 78998887744
No 353
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=95.96 E-value=0.016 Score=36.60 Aligned_cols=38 Identities=18% Similarity=0.235 Sum_probs=31.2
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCC
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERK 51 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~ 51 (125)
+++++++|+|+ |.+|..+++.|.+. ++..|.+.+|+..
T Consensus 17 ~~~~~i~iiG~-G~~g~~~a~~l~~~--g~~~v~v~~r~~~ 54 (155)
T cd01065 17 LKGKKVLILGA-GGAARAVAYALAEL--GAAKIVIVNRTLE 54 (155)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHC--CCCEEEEEcCCHH
Confidence 45789999997 89999999999887 2378898888654
No 354
>PRK06849 hypothetical protein; Provisional
Probab=95.95 E-value=0.016 Score=42.39 Aligned_cols=37 Identities=11% Similarity=0.110 Sum_probs=32.9
Q ss_pred CCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCC
Q psy897 12 KDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERK 51 (125)
Q Consensus 12 ~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~ 51 (125)
+.|+|||||++..+|..+++.|.+. |++|++++..+.
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~~~---G~~Vi~~d~~~~ 39 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFHNA---GHTVILADSLKY 39 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC---CCEEEEEeCCch
Confidence 3689999999999999999999998 899999987654
No 355
>PLN00112 malate dehydrogenase (NADP); Provisional
Probab=95.87 E-value=0.14 Score=38.38 Aligned_cols=103 Identities=14% Similarity=0.073 Sum_probs=62.0
Q ss_pred CceEEEecCccchhHHHHHHHHHhC-----CC-ccEEEEEecCCCCCCHH-HHHHHhhhccCChhhhhh----hhcCccC
Q psy897 13 DGVIFLTGGTGFMGKVLLDTLLRRF-----PS-IHSIYILVRERKGVSPQ-ERIEKMLDNEGPIFKDFA----NLVRLKT 81 (125)
Q Consensus 13 ~~~vlitG~~G~iG~~i~~~l~~~~-----~~-~~~v~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~l~----~~~~l~~ 81 (125)
--+|.|+|++|.+|++++..|+... .+ ..+++.++++....... ..+.+-.. +...++. +..++..
T Consensus 100 ~~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~---~~~~~v~i~~~~ye~~kd 176 (444)
T PLN00112 100 LINVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLY---PLLREVSIGIDPYEVFQD 176 (444)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhh---hhcCceEEecCCHHHhCc
Confidence 3589999999999999999887640 01 13678888766643211 12222110 1111111 1112224
Q ss_pred CCeEEEeccccCcc-hhHHHHhHhhHHHHHHHHHHHhh
Q psy897 82 QRIRFIFLATLRFD-EELKIAIRTNICATQTVVKLAKQ 118 (125)
Q Consensus 82 ~~~Vih~a~~~~~~-~~~~~~~~~Nv~g~~~l~~~~~~ 118 (125)
.|+||-.||..+-. .+-...++.|..-...+.+...+
T Consensus 177 aDiVVitAG~prkpG~tR~dLl~~N~~I~k~i~~~I~~ 214 (444)
T PLN00112 177 AEWALLIGAKPRGPGMERADLLDINGQIFAEQGKALNE 214 (444)
T ss_pred CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 47999999986432 34456778898888888887766
No 356
>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent. This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.
Probab=95.86 E-value=0.12 Score=38.15 Aligned_cols=102 Identities=14% Similarity=0.129 Sum_probs=58.4
Q ss_pred CceEEEecCccchhHHHHHHHHHhCCCcc------EEEEE--ecCCCCCCHHHHHHHhhhccCChhhhhh----hhcCcc
Q psy897 13 DGVIFLTGGTGFMGKVLLDTLLRRFPSIH------SIYIL--VRERKGVSPQERIEKMLDNEGPIFKDFA----NLVRLK 80 (125)
Q Consensus 13 ~~~vlitG~~G~iG~~i~~~l~~~~~~~~------~v~~~--~r~~~~~~~~~~~~~~~~~~~~~~~~l~----~~~~l~ 80 (125)
--+|.|+|++|.+|++++..|... +.. .++.+ +++.+.. .-...++.+...+....+. +..+++
T Consensus 44 p~KV~IIGAaG~VG~~~A~~l~~~--~l~~~~~ei~L~L~diD~~~~~a--~g~a~DL~d~a~~~~~~v~i~~~~y~~~k 119 (387)
T TIGR01757 44 TVNVAVSGAAGMISNHLLFMLASG--EVFGQDQPIALKLLGSERSKEAL--EGVAMELEDSLYPLLREVSIGIDPYEVFE 119 (387)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhc--cccCCCCceEEEEeccCccchhh--hHHHHHHHHhhhhhcCceEEecCCHHHhC
Confidence 348999999999999999999876 222 23333 4444322 1111122221001111111 111222
Q ss_pred CCCeEEEeccccCcc-hhHHHHhHhhHHHHHHHHHHHhh
Q psy897 81 TQRIRFIFLATLRFD-EELKIAIRTNICATQTVVKLAKQ 118 (125)
Q Consensus 81 ~~~~Vih~a~~~~~~-~~~~~~~~~Nv~g~~~l~~~~~~ 118 (125)
..|+||-+||..+-. ++-...++.|+.-...+.+..++
T Consensus 120 daDIVVitAG~prkpg~tR~dll~~N~~I~k~i~~~I~~ 158 (387)
T TIGR01757 120 DADWALLIGAKPRGPGMERADLLDINGQIFADQGKALNA 158 (387)
T ss_pred CCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 447999999986422 34456778888888888887766
No 357
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=95.86 E-value=0.016 Score=44.33 Aligned_cols=36 Identities=19% Similarity=0.178 Sum_probs=31.3
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCC
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRER 50 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~ 50 (125)
+++|+++|+|+ |++|++++..|.+. |.+|++++|+.
T Consensus 377 ~~~k~vlIlGa-GGagrAia~~L~~~---G~~V~i~nR~~ 412 (529)
T PLN02520 377 LAGKLFVVIGA-GGAGKALAYGAKEK---GARVVIANRTY 412 (529)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHC---CCEEEEEcCCH
Confidence 46789999999 79999999999998 67899888853
No 358
>PRK06444 prephenate dehydrogenase; Provisional
Probab=95.75 E-value=0.018 Score=38.51 Aligned_cols=29 Identities=28% Similarity=0.401 Sum_probs=25.2
Q ss_pred ceEEEecCccchhHHHHHHHHHhCCCccEEEE
Q psy897 14 GVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYI 45 (125)
Q Consensus 14 ~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~ 45 (125)
+++.|.||+|.+|+.+++.|.+. |+.|++
T Consensus 1 ~~~~iiG~~G~mG~~~~~~~~~~---g~~v~~ 29 (197)
T PRK06444 1 MMEIIIGKNGRLGRVLCSILDDN---GLGVYI 29 (197)
T ss_pred CEEEEEecCCcHHHHHHHHHHhC---CCEEEE
Confidence 47999999999999999999887 677754
No 359
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=95.74 E-value=0.032 Score=34.39 Aligned_cols=35 Identities=20% Similarity=0.355 Sum_probs=27.8
Q ss_pred ceEEEecCccchhHHHHHHHHHhCCCccEEEE-EecCC
Q psy897 14 GVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYI-LVRER 50 (125)
Q Consensus 14 ~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~-~~r~~ 50 (125)
++|.|.|++|-+|+.|++.+.+. + +.++.. +++.+
T Consensus 1 mrV~i~G~~GrMG~~i~~~i~~~-~-~~~lv~~v~~~~ 36 (124)
T PF01113_consen 1 MRVGIVGASGRMGRAIAEAILES-P-GFELVGAVDRKP 36 (124)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHS-T-TEEEEEEEETTT
T ss_pred CEEEEECCCCHHHHHHHHHHHhc-C-CcEEEEEEecCC
Confidence 47999999999999999999996 3 466555 45555
No 360
>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family. Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains
Probab=95.63 E-value=0.22 Score=34.61 Aligned_cols=101 Identities=10% Similarity=0.017 Sum_probs=56.7
Q ss_pred EEEecCccchhHHHHHHHHHhCC-CccEEEEEecCCCCCCH-HHHHHHhhhccCChhhhhhh----hcCccCCCeEEEec
Q psy897 16 IFLTGGTGFMGKVLLDTLLRRFP-SIHSIYILVRERKGVSP-QERIEKMLDNEGPIFKDFAN----LVRLKTQRIRFIFL 89 (125)
Q Consensus 16 vlitG~~G~iG~~i~~~l~~~~~-~~~~v~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~l~~----~~~l~~~~~Vih~a 89 (125)
|.|+|++|.+|..++..|+.... ...++.++|.++..... ...+.+... ......+.. ...+...|+||-++
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~--~~~~~~i~~~~d~~~~~~~aDiVv~t~ 78 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVE--PLADIKVSITDDPYEAFKDADVVIITA 78 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhh--hccCcEEEECCchHHHhCCCCEEEECC
Confidence 46899999999999999988710 12789999987654321 122333222 100011110 11222447999998
Q ss_pred cccCcc-hhHHHHhHhhHHHHHHHHHHHhh
Q psy897 90 ATLRFD-EELKIAIRTNICATQTVVKLAKQ 118 (125)
Q Consensus 90 ~~~~~~-~~~~~~~~~Nv~g~~~l~~~~~~ 118 (125)
+..+.. .........|+.-...+.+..++
T Consensus 79 ~~~~~~g~~r~~~~~~n~~i~~~i~~~i~~ 108 (263)
T cd00650 79 GVGRKPGMGRLDLLKRNVPIVKEIGDNIEK 108 (263)
T ss_pred CCCCCcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 876432 22233445676666666665544
No 361
>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=95.57 E-value=0.02 Score=40.66 Aligned_cols=34 Identities=18% Similarity=0.379 Sum_probs=30.4
Q ss_pred ceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCC
Q psy897 14 GVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERK 51 (125)
Q Consensus 14 ~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~ 51 (125)
++|.|+| .|.+|..++..|++. |++|+++++++.
T Consensus 3 ~~V~VIG-~G~mG~~iA~~la~~---G~~V~v~d~~~~ 36 (308)
T PRK06129 3 GSVAIIG-AGLIGRAWAIVFARA---GHEVRLWDADPA 36 (308)
T ss_pred cEEEEEC-ccHHHHHHHHHHHHC---CCeeEEEeCCHH
Confidence 5789998 999999999999998 799999998754
No 362
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=95.56 E-value=0.017 Score=38.59 Aligned_cols=40 Identities=15% Similarity=0.218 Sum_probs=32.1
Q ss_pred cccccCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecC
Q psy897 7 VEDFYKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRE 49 (125)
Q Consensus 7 ~~~~~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~ 49 (125)
....+..++|+|.|+ |.+|+.++..|.+. +..+++++|.+
T Consensus 15 ~q~~L~~~~V~IvG~-GglGs~ia~~La~~--Gvg~i~lvD~D 54 (200)
T TIGR02354 15 IVQKLEQATVAICGL-GGLGSNVAINLARA--GIGKLILVDFD 54 (200)
T ss_pred HHHHHhCCcEEEECc-CHHHHHHHHHHHHc--CCCEEEEECCC
Confidence 344577889999987 67999999999998 33479998876
No 363
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=95.55 E-value=0.03 Score=37.48 Aligned_cols=35 Identities=23% Similarity=0.286 Sum_probs=30.6
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecC
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRE 49 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~ 49 (125)
+++++++|.|| |-+|...++.|++. +.+|.++++.
T Consensus 8 l~~k~vLVIGg-G~va~~ka~~Ll~~---ga~V~VIs~~ 42 (202)
T PRK06718 8 LSNKRVVIVGG-GKVAGRRAITLLKY---GAHIVVISPE 42 (202)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHC---CCeEEEEcCC
Confidence 67899999998 88999999999998 6889888753
No 364
>KOG1198|consensus
Probab=95.53 E-value=0.027 Score=40.81 Aligned_cols=26 Identities=19% Similarity=0.351 Sum_probs=22.2
Q ss_pred cCCceEEEecCccchhHHHHHHHHHh
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRR 36 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~ 36 (125)
-+++.+||.||+|.+|++.++-....
T Consensus 156 ~~g~~vLv~ggsggVG~~aiQlAk~~ 181 (347)
T KOG1198|consen 156 SKGKSVLVLGGSGGVGTAAIQLAKHA 181 (347)
T ss_pred CCCCeEEEEeCCcHHHHHHHHHHHhc
Confidence 45789999999999999988776666
No 365
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=95.46 E-value=0.033 Score=38.85 Aligned_cols=36 Identities=17% Similarity=0.236 Sum_probs=30.9
Q ss_pred CCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCC
Q psy897 12 KDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERK 51 (125)
Q Consensus 12 ~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~ 51 (125)
++++++|+|+ |.+|++++..|++. +.+|.+++|+..
T Consensus 116 ~~k~vliiGa-Gg~g~aia~~L~~~---g~~v~v~~R~~~ 151 (270)
T TIGR00507 116 PNQRVLIIGA-GGAARAVALPLLKA---DCNVIIANRTVS 151 (270)
T ss_pred cCCEEEEEcC-cHHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence 4789999998 79999999999987 689999888644
No 366
>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent. The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.
Probab=95.41 E-value=0.28 Score=34.97 Aligned_cols=99 Identities=14% Similarity=0.080 Sum_probs=55.9
Q ss_pred ceEEEecCccchhHHHHHHHHHhCCCcc-EEEEEecCCCCCCHHHHHHHhhhc--cCChhhhhhh---hcCccCCCeEEE
Q psy897 14 GVIFLTGGTGFMGKVLLDTLLRRFPSIH-SIYILVRERKGVSPQERIEKMLDN--EGPIFKDFAN---LVRLKTQRIRFI 87 (125)
Q Consensus 14 ~~vlitG~~G~iG~~i~~~l~~~~~~~~-~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~l~~---~~~l~~~~~Vih 87 (125)
++|.|.|+ |++|..++..++.. +. +|++++..+...... .. ++... .......+.. ...+...|+||-
T Consensus 2 ~KV~VIGa-G~vG~~iA~~la~~---g~~~VvlvDi~~~l~~g~-a~-d~~~~~~~~~~~~~i~~t~d~~~~~~aDiVIi 75 (305)
T TIGR01763 2 KKISVIGA-GFVGATTAFRLAEK---ELADLVLLDVVEGIPQGK-AL-DMYEASPVGGFDTKVTGTNNYADTANSDIVVI 75 (305)
T ss_pred CEEEEECc-CHHHHHHHHHHHHc---CCCeEEEEeCCCChhHHH-HH-hhhhhhhccCCCcEEEecCCHHHhCCCCEEEE
Confidence 57889986 99999999999887 43 799999854421111 11 11110 0011111211 001223478888
Q ss_pred eccccCc-chhHHHHhHhhHHHHHHHHHHHhh
Q psy897 88 FLATLRF-DEELKIAIRTNICATQTVVKLAKQ 118 (125)
Q Consensus 88 ~a~~~~~-~~~~~~~~~~Nv~g~~~l~~~~~~ 118 (125)
++|...- ..+-...++.|..-...+++...+
T Consensus 76 tag~p~~~~~sR~~l~~~N~~iv~~i~~~I~~ 107 (305)
T TIGR01763 76 TAGLPRKPGMSREDLLSMNAGIVREVTGRIME 107 (305)
T ss_pred cCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 9997532 223344566788777777765544
No 367
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=95.36 E-value=0.055 Score=35.38 Aligned_cols=38 Identities=16% Similarity=0.110 Sum_probs=31.8
Q ss_pred ccCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCC
Q psy897 10 FYKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERK 51 (125)
Q Consensus 10 ~~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~ 51 (125)
.+.++++.|.| .|-||+++++.+... |.+|++++|...
T Consensus 33 ~l~g~tvgIiG-~G~IG~~vA~~l~~f---G~~V~~~d~~~~ 70 (178)
T PF02826_consen 33 ELRGKTVGIIG-YGRIGRAVARRLKAF---GMRVIGYDRSPK 70 (178)
T ss_dssp -STTSEEEEES-TSHHHHHHHHHHHHT---T-EEEEEESSCH
T ss_pred ccCCCEEEEEE-EcCCcCeEeeeeecC---CceeEEecccCC
Confidence 35689999995 599999999999988 799999998665
No 368
>COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism]
Probab=95.33 E-value=0.056 Score=38.89 Aligned_cols=35 Identities=29% Similarity=0.426 Sum_probs=26.2
Q ss_pred CceEEEecCccchhHHHHHHHHHhCCCccEEEEEe
Q psy897 13 DGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILV 47 (125)
Q Consensus 13 ~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~ 47 (125)
+++|.|.|+||.+|+.+++.|.++.+....+.++.
T Consensus 1 ~~~VavvGATG~VG~~~~~~L~e~~f~~~~~~~~A 35 (334)
T COG0136 1 KLNVAVLGATGAVGQVLLELLEERHFPFEELVLLA 35 (334)
T ss_pred CcEEEEEeccchHHHHHHHHHHhcCCCcceEEEEe
Confidence 36899999999999999999998533333344443
No 369
>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form. This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.
Probab=95.29 E-value=0.031 Score=40.51 Aligned_cols=30 Identities=30% Similarity=0.483 Sum_probs=25.0
Q ss_pred ceEEEecCccchhHHHHHHHHHhCCCccEEEE
Q psy897 14 GVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYI 45 (125)
Q Consensus 14 ~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~ 45 (125)
++|.|.|+||++|..+++.|.+. |. .++..
T Consensus 1 ~kVaIiGATG~vG~ellr~L~~h-P~-~el~~ 30 (346)
T TIGR01850 1 IKVAIVGASGYTGGELLRLLLNH-PE-VEITY 30 (346)
T ss_pred CEEEEECCCCHHHHHHHHHHHcC-CC-ceEEE
Confidence 47999999999999999999876 54 66663
No 370
>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms). Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.
Probab=95.27 E-value=0.031 Score=40.38 Aligned_cols=35 Identities=26% Similarity=0.432 Sum_probs=25.3
Q ss_pred eEEEecCccchhHHHHHHHHHhCCCccEEEEEecC
Q psy897 15 VIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRE 49 (125)
Q Consensus 15 ~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~ 49 (125)
+|.|.||+|++|..|++.|.++......+..+.+.
T Consensus 1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~ 35 (339)
T TIGR01296 1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASD 35 (339)
T ss_pred CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEecc
Confidence 48999999999999999887752123455555443
No 371
>COG3268 Uncharacterized conserved protein [Function unknown]
Probab=95.27 E-value=0.021 Score=41.05 Aligned_cols=35 Identities=23% Similarity=0.296 Sum_probs=28.2
Q ss_pred ceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCC
Q psy897 14 GVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERK 51 (125)
Q Consensus 14 ~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~ 51 (125)
..++|-||+||.|..++++|.++ +..-.+-.|+..
T Consensus 7 ~d~iiYGAtGy~G~lvae~l~~~---g~~~aLAgRs~~ 41 (382)
T COG3268 7 YDIIIYGATGYAGGLVAEYLARE---GLTAALAGRSSA 41 (382)
T ss_pred eeEEEEccccchhHHHHHHHHHc---CCchhhccCCHH
Confidence 46899999999999999999998 455555566554
No 372
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=95.22 E-value=0.16 Score=32.85 Aligned_cols=37 Identities=19% Similarity=0.270 Sum_probs=29.1
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCC
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRER 50 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~ 50 (125)
+.||+++|.|.+..+|+-++..|.++ +..|..+....
T Consensus 34 l~Gk~v~VvGrs~~VG~Pla~lL~~~---~atVt~~h~~T 70 (160)
T PF02882_consen 34 LEGKKVVVVGRSNIVGKPLAMLLLNK---GATVTICHSKT 70 (160)
T ss_dssp TTT-EEEEE-TTTTTHHHHHHHHHHT---T-EEEEE-TTS
T ss_pred CCCCEEEEECCcCCCChHHHHHHHhC---CCeEEeccCCC
Confidence 67999999999999999999999988 78888876654
No 373
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=95.21 E-value=0.039 Score=38.97 Aligned_cols=37 Identities=14% Similarity=0.178 Sum_probs=31.9
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCC
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERK 51 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~ 51 (125)
+.+++++|+|. |.+|+.+++.|... |.+|++.+|++.
T Consensus 149 l~gk~v~IiG~-G~iG~avA~~L~~~---G~~V~v~~R~~~ 185 (287)
T TIGR02853 149 IHGSNVMVLGF-GRTGMTIARTFSAL---GARVFVGARSSA 185 (287)
T ss_pred CCCCEEEEEcC-hHHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence 45799999998 77999999999988 689999998654
No 374
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=95.20 E-value=0.04 Score=38.73 Aligned_cols=36 Identities=17% Similarity=0.199 Sum_probs=31.2
Q ss_pred CCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCC
Q psy897 12 KDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRER 50 (125)
Q Consensus 12 ~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~ 50 (125)
.+.+++|+|++|.+|.++++.+... +.+|+++++++
T Consensus 162 ~~~~vlI~ga~g~vG~~~~~~a~~~---g~~v~~~~~~~ 197 (332)
T cd08259 162 KGDTVLVTGAGGGVGIHAIQLAKAL---GARVIAVTRSP 197 (332)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHc---CCeEEEEeCCH
Confidence 4679999999999999999999887 78888887654
No 375
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=95.09 E-value=0.041 Score=39.80 Aligned_cols=38 Identities=18% Similarity=0.413 Sum_probs=31.6
Q ss_pred ccCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCC
Q psy897 10 FYKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRER 50 (125)
Q Consensus 10 ~~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~ 50 (125)
.++..+|+|.|+ |++|+.++..|... +..++.++|.+.
T Consensus 21 ~L~~~~VlVvG~-GglGs~va~~La~a--Gvg~i~lvD~D~ 58 (339)
T PRK07688 21 KLREKHVLIIGA-GALGTANAEMLVRA--GVGKVTIVDRDY 58 (339)
T ss_pred HhcCCcEEEECC-CHHHHHHHHHHHHc--CCCeEEEEeCCc
Confidence 466789999987 89999999999998 345899998754
No 376
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=95.07 E-value=0.045 Score=37.73 Aligned_cols=37 Identities=14% Similarity=0.167 Sum_probs=31.2
Q ss_pred ccCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecC
Q psy897 10 FYKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRE 49 (125)
Q Consensus 10 ~~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~ 49 (125)
.+++.+|+|.|+ |.+|+.+++.|... +..++.++|.+
T Consensus 29 ~L~~~~VliiG~-GglGs~va~~La~~--Gvg~i~lvD~D 65 (245)
T PRK05690 29 KLKAARVLVVGL-GGLGCAASQYLAAA--GVGTLTLVDFD 65 (245)
T ss_pred HhcCCeEEEECC-CHHHHHHHHHHHHc--CCCEEEEEcCC
Confidence 466789999988 99999999999998 45688888764
No 377
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]
Probab=95.07 E-value=0.041 Score=37.08 Aligned_cols=34 Identities=26% Similarity=0.266 Sum_probs=28.5
Q ss_pred eEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCC
Q psy897 15 VIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERK 51 (125)
Q Consensus 15 ~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~ 51 (125)
.+...||+|-||+.|+.+|.+. +++|.+-.|..+
T Consensus 2 ~~~~i~GtGniG~alA~~~a~a---g~eV~igs~r~~ 35 (211)
T COG2085 2 MIIAIIGTGNIGSALALRLAKA---GHEVIIGSSRGP 35 (211)
T ss_pred cEEEEeccChHHHHHHHHHHhC---CCeEEEecCCCh
Confidence 4566789999999999999998 799999866544
No 378
>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms). Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.
Probab=95.04 E-value=0.045 Score=39.53 Aligned_cols=31 Identities=19% Similarity=0.414 Sum_probs=24.9
Q ss_pred ceEEEecCccchhHHHHHHHHHhCCCccEEEEE
Q psy897 14 GVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYIL 46 (125)
Q Consensus 14 ~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~ 46 (125)
++|.|+|++|++|++|++.|... + ...+..+
T Consensus 1 ~kVaIvGatG~~G~~L~~~l~~~-~-~~~l~~v 31 (341)
T TIGR00978 1 MRVAVLGATGLVGQKFVKLLAKH-P-YFELAKV 31 (341)
T ss_pred CEEEEECCCCHHHHHHHHHHHhC-C-CceEEEE
Confidence 47999999999999999988776 3 2566665
No 379
>PLN02383 aspartate semialdehyde dehydrogenase
Probab=95.02 E-value=0.067 Score=38.78 Aligned_cols=35 Identities=26% Similarity=0.319 Sum_probs=25.9
Q ss_pred CceEEEecCccchhHHHHHHHHHhCCCccEEEEEe
Q psy897 13 DGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILV 47 (125)
Q Consensus 13 ~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~ 47 (125)
..+|.|.|++|++|..|++.|.++......+..+.
T Consensus 7 ~~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~la 41 (344)
T PLN02383 7 GPSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLA 41 (344)
T ss_pred CCeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEE
Confidence 46899999999999999999887521124555443
No 380
>PLN02602 lactate dehydrogenase
Probab=95.02 E-value=0.56 Score=34.18 Aligned_cols=101 Identities=8% Similarity=0.077 Sum_probs=58.3
Q ss_pred ceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCC-HHHHHHHhhhccCChhhhhhh---hcCccCCCeEEEec
Q psy897 14 GVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVS-PQERIEKMLDNEGPIFKDFAN---LVRLKTQRIRFIFL 89 (125)
Q Consensus 14 ~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~l~~---~~~l~~~~~Vih~a 89 (125)
++|.|+|+ |.+|+.++..|+... -..++.++|.++.... ....+.+.... ... ..+.. ...++..|+||-+|
T Consensus 38 ~KI~IIGa-G~VG~~~a~~l~~~~-l~~el~LiDi~~~~~~g~a~DL~~~~~~-~~~-~~i~~~~dy~~~~daDiVVitA 113 (350)
T PLN02602 38 TKVSVVGV-GNVGMAIAQTILTQD-LADELALVDVNPDKLRGEMLDLQHAAAF-LPR-TKILASTDYAVTAGSDLCIVTA 113 (350)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCC-CCCEEEEEeCCCchhhHHHHHHHhhhhc-CCC-CEEEeCCCHHHhCCCCEEEECC
Confidence 58999995 999999999988761 1357899998654321 11122221110 000 12211 11122447999999
Q ss_pred cccCc-chhHHHHhHhhHHHHHHHHHHHhh
Q psy897 90 ATLRF-DEELKIAIRTNICATQTVVKLAKQ 118 (125)
Q Consensus 90 ~~~~~-~~~~~~~~~~Nv~g~~~l~~~~~~ 118 (125)
|..+- ..+-...+..|+.-...+.+..++
T Consensus 114 G~~~k~g~tR~dll~~N~~I~~~i~~~I~~ 143 (350)
T PLN02602 114 GARQIPGESRLNLLQRNVALFRKIIPELAK 143 (350)
T ss_pred CCCCCcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 98632 223345567787776777666554
No 381
>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol
Probab=95.02 E-value=0.046 Score=36.49 Aligned_cols=38 Identities=18% Similarity=0.317 Sum_probs=31.5
Q ss_pred ccCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCC
Q psy897 10 FYKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRER 50 (125)
Q Consensus 10 ~~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~ 50 (125)
.+++.+|+|.|++| +|+++++.|... +..++.++|.+.
T Consensus 16 ~L~~s~VlviG~gg-lGsevak~L~~~--GVg~i~lvD~d~ 53 (198)
T cd01485 16 KLRSAKVLIIGAGA-LGAEIAKNLVLA--GIDSITIVDHRL 53 (198)
T ss_pred HHhhCcEEEECCCH-HHHHHHHHHHHc--CCCEEEEEECCc
Confidence 46678999998877 999999999998 457898888753
No 382
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1.1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....
Probab=94.98 E-value=0.043 Score=36.05 Aligned_cols=33 Identities=18% Similarity=0.272 Sum_probs=27.6
Q ss_pred eEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCC
Q psy897 15 VIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERK 51 (125)
Q Consensus 15 ~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~ 51 (125)
+|.|.|+ |.+|+.|+..++.. |++|.++++++.
T Consensus 1 ~V~ViGa-G~mG~~iA~~~a~~---G~~V~l~d~~~~ 33 (180)
T PF02737_consen 1 KVAVIGA-GTMGRGIAALFARA---GYEVTLYDRSPE 33 (180)
T ss_dssp EEEEES--SHHHHHHHHHHHHT---TSEEEEE-SSHH
T ss_pred CEEEEcC-CHHHHHHHHHHHhC---CCcEEEEECChH
Confidence 4788887 99999999999998 899999998665
No 383
>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins. Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al
Probab=94.93 E-value=0.089 Score=30.12 Aligned_cols=35 Identities=20% Similarity=0.280 Sum_probs=29.6
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEec
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVR 48 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r 48 (125)
+.+++++|.|. |.+|+.+++.|.+. ++.+|++.+|
T Consensus 21 ~~~~~v~i~G~-G~~g~~~a~~l~~~--~~~~v~v~~r 55 (86)
T cd05191 21 LKGKTVVVLGA-GEVGKGIAKLLADE--GGKKVVLCDR 55 (86)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHc--CCCEEEEEcC
Confidence 56789999999 99999999999887 2467888777
No 384
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=94.88 E-value=0.055 Score=38.58 Aligned_cols=37 Identities=11% Similarity=0.119 Sum_probs=30.1
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCC
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRER 50 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~ 50 (125)
-.+.+++|+|++|.+|..+++..... |.+|++.+++.
T Consensus 150 ~~g~~VlI~Ga~G~vG~~aiqlAk~~---G~~Vi~~~~~~ 186 (338)
T cd08295 150 KKGETVFVSAASGAVGQLVGQLAKLK---GCYVVGSAGSD 186 (338)
T ss_pred CCCCEEEEecCccHHHHHHHHHHHHc---CCEEEEEeCCH
Confidence 34789999999999999998876666 68888877654
No 385
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=94.81 E-value=0.038 Score=32.84 Aligned_cols=36 Identities=19% Similarity=0.251 Sum_probs=29.4
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCC
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRER 50 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~ 50 (125)
+++++++|+|| |-+|..=++.|++. +.+|++++...
T Consensus 5 l~~~~vlVvGg-G~va~~k~~~Ll~~---gA~v~vis~~~ 40 (103)
T PF13241_consen 5 LKGKRVLVVGG-GPVAARKARLLLEA---GAKVTVISPEI 40 (103)
T ss_dssp -TT-EEEEEEE-SHHHHHHHHHHCCC---TBEEEEEESSE
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHhC---CCEEEEECCch
Confidence 56899999998 88898888999888 79999988754
No 386
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=94.75 E-value=0.044 Score=40.72 Aligned_cols=34 Identities=18% Similarity=0.338 Sum_probs=29.5
Q ss_pred ceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCC
Q psy897 14 GVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERK 51 (125)
Q Consensus 14 ~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~ 51 (125)
|+++|+|+ |.+|+++++.|.+. ++.|+++++++.
T Consensus 1 m~viIiG~-G~ig~~~a~~L~~~---g~~v~vid~~~~ 34 (453)
T PRK09496 1 MKIIIVGA-GQVGYTLAENLSGE---NNDVTVIDTDEE 34 (453)
T ss_pred CEEEEECC-CHHHHHHHHHHHhC---CCcEEEEECCHH
Confidence 47899987 99999999999988 789999988554
No 387
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1. Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.
Probab=94.69 E-value=0.054 Score=36.12 Aligned_cols=38 Identities=26% Similarity=0.361 Sum_probs=30.9
Q ss_pred ccCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCC
Q psy897 10 FYKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRER 50 (125)
Q Consensus 10 ~~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~ 50 (125)
.+++.+|+|.|+.| +|+++++.|... +..++.++|.+.
T Consensus 18 ~L~~s~VlIiG~gg-lG~evak~La~~--GVg~i~lvD~d~ 55 (197)
T cd01492 18 RLRSARILLIGLKG-LGAEIAKNLVLS--GIGSLTILDDRT 55 (197)
T ss_pred HHHhCcEEEEcCCH-HHHHHHHHHHHc--CCCEEEEEECCc
Confidence 46678999998666 999999999998 457888888653
No 388
>PF12953 DUF3842: Domain of unknown function (DUF3842); InterPro: IPR024208 This family of proteins has no known function.
Probab=94.66 E-value=0.12 Score=32.08 Aligned_cols=36 Identities=22% Similarity=0.397 Sum_probs=30.4
Q ss_pred eEEEecCccchhHHHHHHHHHhCCCccEEEEEecCC
Q psy897 15 VIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRER 50 (125)
Q Consensus 15 ~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~ 50 (125)
.+.|-|-.|.||++++++|.+.+|+..+|+.+..+.
T Consensus 2 I~VIDGQGGGiG~~iv~~lr~~~~~~~eI~AlGTNa 37 (131)
T PF12953_consen 2 IAVIDGQGGGIGKQIVEKLRKELPEEVEIIALGTNA 37 (131)
T ss_pred EEEEeCCCChhHHHHHHHHHHhCCCCcEEEEEehhH
Confidence 467889999999999999999988778888887543
No 389
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.66 E-value=0.087 Score=37.50 Aligned_cols=38 Identities=16% Similarity=0.243 Sum_probs=33.9
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCC
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERK 51 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~ 51 (125)
+.||+|.+.|.+|.+|+-++..|++. ++.|.++.+...
T Consensus 157 l~Gk~V~vIG~s~ivG~PmA~~L~~~---gatVtv~~~~t~ 194 (301)
T PRK14194 157 LTGKHAVVIGRSNIVGKPMAALLLQA---HCSVTVVHSRST 194 (301)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHC---CCEEEEECCCCC
Confidence 56999999999999999999999998 799999976544
No 390
>PRK08040 putative semialdehyde dehydrogenase; Provisional
Probab=94.63 E-value=0.091 Score=38.01 Aligned_cols=35 Identities=40% Similarity=0.620 Sum_probs=27.7
Q ss_pred CceEEEecCccchhHHHHHHHHHh-CCCccEEEEEec
Q psy897 13 DGVIFLTGGTGFMGKVLLDTLLRR-FPSIHSIYILVR 48 (125)
Q Consensus 13 ~~~vlitG~~G~iG~~i~~~l~~~-~~~~~~v~~~~r 48 (125)
..+|.|.||||++|..+++-|.++ .|. .++..+..
T Consensus 4 ~~~vaIvGATG~vG~ellrlL~~~~hP~-~~l~~laS 39 (336)
T PRK08040 4 GWNIALLGATGAVGEALLELLAERQFPV-GELYALAS 39 (336)
T ss_pred CCEEEEEccCCHHHHHHHHHHhcCCCCc-eEEEEEEc
Confidence 568999999999999999988874 343 67666644
No 391
>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=94.59 E-value=0.55 Score=33.58 Aligned_cols=103 Identities=10% Similarity=0.003 Sum_probs=58.7
Q ss_pred eEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCCH-HHHHHHhhhccCChhhhhh--hhcCccCCCeEEEeccc
Q psy897 15 VIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVSP-QERIEKMLDNEGPIFKDFA--NLVRLKTQRIRFIFLAT 91 (125)
Q Consensus 15 ~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~l~--~~~~l~~~~~Vih~a~~ 91 (125)
+|.|.|+ |.+|+.++..|+.. +-..+++++|..++.... ...+.+...-.....-.+. +..++...|+||-+||.
T Consensus 1 Ki~IIGa-G~VG~~~a~~l~~~-~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~~y~~~~~aDivvitaG~ 78 (307)
T cd05290 1 KLVVIGA-GHVGSAVLNYALAL-GLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAGDYDDCADADIIVITAGP 78 (307)
T ss_pred CEEEECC-CHHHHHHHHHHHhc-CCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEECCHHHhCCCCEEEECCCC
Confidence 4788888 99999999999876 113579999986553211 1122221110000000111 11122244789999998
Q ss_pred cCcc-hh--HHHHhHhhHHHHHHHHHHHhhC
Q psy897 92 LRFD-EE--LKIAIRTNICATQTVVKLAKQC 119 (125)
Q Consensus 92 ~~~~-~~--~~~~~~~Nv~g~~~l~~~~~~~ 119 (125)
.+-. .. -...++.|..-...+.+..++.
T Consensus 79 ~~kpg~tr~R~dll~~N~~I~~~i~~~i~~~ 109 (307)
T cd05290 79 SIDPGNTDDRLDLAQTNAKIIREIMGNITKV 109 (307)
T ss_pred CCCCCCCchHHHHHHHHHHHHHHHHHHHHHh
Confidence 6422 22 2556688888888887766654
No 392
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=94.53 E-value=0.077 Score=38.37 Aligned_cols=39 Identities=21% Similarity=0.385 Sum_probs=31.7
Q ss_pred cccCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCC
Q psy897 9 DFYKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRER 50 (125)
Q Consensus 9 ~~~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~ 50 (125)
..+++++|+|.|+ |.+|+++++.|... +..++.++|++.
T Consensus 20 ~~L~~~~VlIiG~-GglGs~va~~La~a--Gvg~i~lvD~D~ 58 (338)
T PRK12475 20 RKIREKHVLIVGA-GALGAANAEALVRA--GIGKLTIADRDY 58 (338)
T ss_pred HhhcCCcEEEECC-CHHHHHHHHHHHHc--CCCEEEEEcCCc
Confidence 3467889999986 66999999999998 335888888864
No 393
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.50 E-value=0.23 Score=35.16 Aligned_cols=38 Identities=16% Similarity=0.106 Sum_probs=32.8
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCC
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERK 51 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~ 51 (125)
+.||+++|.|.+..+|+-++.-|+.+ +..|.++.+...
T Consensus 157 l~Gk~vvViGrs~iVG~Pla~lL~~~---~atVtv~hs~T~ 194 (285)
T PRK10792 157 TYGLNAVVVGASNIVGRPMSLELLLA---GCTVTVCHRFTK 194 (285)
T ss_pred CCCCEEEEECCCcccHHHHHHHHHHC---CCeEEEEECCCC
Confidence 56899999999999999999999887 688888876443
No 394
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=94.42 E-value=0.065 Score=35.84 Aligned_cols=39 Identities=15% Similarity=0.216 Sum_probs=31.8
Q ss_pred cccCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCC
Q psy897 9 DFYKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRER 50 (125)
Q Consensus 9 ~~~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~ 50 (125)
..+++.+|+|.| .|.+|+++++.|... +..++.++|.+.
T Consensus 17 ~kl~~~~VlviG-~GglGs~ia~~La~~--Gv~~i~lvD~d~ 55 (202)
T TIGR02356 17 QRLLNSHVLIIG-AGGLGSPAALYLAGA--GVGTIVIVDDDH 55 (202)
T ss_pred HHhcCCCEEEEC-CCHHHHHHHHHHHHc--CCCeEEEecCCE
Confidence 457788999997 788999999999998 346899988763
No 395
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=94.36 E-value=0.089 Score=37.06 Aligned_cols=36 Identities=8% Similarity=0.103 Sum_probs=29.7
Q ss_pred CCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCC
Q psy897 12 KDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRER 50 (125)
Q Consensus 12 ~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~ 50 (125)
++.+++|+||+|.+|..+++..... |.+|++.++++
T Consensus 143 ~g~~vlI~ga~g~vG~~aiqlA~~~---G~~vi~~~~s~ 178 (329)
T cd08294 143 AGETVVVNGAAGAVGSLVGQIAKIK---GCKVIGCAGSD 178 (329)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHc---CCEEEEEeCCH
Confidence 4789999999999999988877776 67888877644
No 396
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=94.35 E-value=0.099 Score=37.01 Aligned_cols=36 Identities=8% Similarity=0.070 Sum_probs=29.4
Q ss_pred CCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCC
Q psy897 12 KDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRER 50 (125)
Q Consensus 12 ~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~ 50 (125)
++.+++|+|++|.+|...++..... |.+|++.++++
T Consensus 138 ~g~~VLI~ga~g~vG~~aiqlAk~~---G~~Vi~~~~s~ 173 (325)
T TIGR02825 138 GGETVMVNAAAGAVGSVVGQIAKLK---GCKVVGAAGSD 173 (325)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHc---CCEEEEEeCCH
Confidence 4789999999999999988776666 67888877643
No 397
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.30 E-value=0.11 Score=36.87 Aligned_cols=36 Identities=19% Similarity=0.240 Sum_probs=32.4
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEe-cC
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILV-RE 49 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~-r~ 49 (125)
+.||+|.|.|.++.+|+.++..|++. ++.|.++. |.
T Consensus 156 ~~Gk~V~viGrs~~mG~PmA~~L~~~---g~tVtv~~~rT 192 (296)
T PRK14188 156 LSGLNAVVIGRSNLVGKPMAQLLLAA---NATVTIAHSRT 192 (296)
T ss_pred CCCCEEEEEcCCcchHHHHHHHHHhC---CCEEEEECCCC
Confidence 57999999999999999999999998 79999984 54
No 398
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=94.28 E-value=0.14 Score=32.97 Aligned_cols=33 Identities=15% Similarity=0.208 Sum_probs=28.2
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEe
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILV 47 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~ 47 (125)
+++++|+|.|| |-+|...++.|++. +++|.+++
T Consensus 11 l~~~~vlVvGG-G~va~rka~~Ll~~---ga~V~VIs 43 (157)
T PRK06719 11 LHNKVVVIIGG-GKIAYRKASGLKDT---GAFVTVVS 43 (157)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHhC---CCEEEEEc
Confidence 57899999975 67899999999998 78998885
No 399
>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []. In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....
Probab=94.26 E-value=0.12 Score=32.23 Aligned_cols=35 Identities=26% Similarity=0.430 Sum_probs=28.0
Q ss_pred EEEecCccchhHHHHHHHHHhCCCccEEEEEecCCC
Q psy897 16 IFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERK 51 (125)
Q Consensus 16 vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~ 51 (125)
+.|.|+||-||+.-.+-+.+. |+.++|+.+.-...
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~-~d~f~v~~Lsa~~n 35 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKH-PDKFEVVALSAGSN 35 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHC-TTTEEEEEEEESST
T ss_pred CEEEcCCcHHHHHHHHHHHhC-CCceEEEEEEcCCC
Confidence 579999999999987777665 66789999876444
No 400
>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins. Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas
Probab=94.22 E-value=0.66 Score=32.85 Aligned_cols=98 Identities=14% Similarity=0.035 Sum_probs=51.3
Q ss_pred EEEecCccchhHHHHHHHHHhCCCcc-EEEEEecCCCCCCHHH-HHHHhhhccCChhhhhhh---hcCccCCCeEEEecc
Q psy897 16 IFLTGGTGFMGKVLLDTLLRRFPSIH-SIYILVRERKGVSPQE-RIEKMLDNEGPIFKDFAN---LVRLKTQRIRFIFLA 90 (125)
Q Consensus 16 vlitG~~G~iG~~i~~~l~~~~~~~~-~v~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~l~~---~~~l~~~~~Vih~a~ 90 (125)
|.|.|+ |.+|..++..++.. +. +|+++|.++....... .+.+.... ......+.. ...+...|+||.+++
T Consensus 1 I~IIGa-G~vG~~ia~~la~~---~l~eV~L~Di~e~~~~g~~~dl~~~~~~-~~~~~~I~~t~d~~~l~dADiVIit~g 75 (300)
T cd01339 1 ISIIGA-GNVGATLAQLLALK---ELGDVVLLDIVEGLPQGKALDISQAAPI-LGSDTKVTGTNDYEDIAGSDVVVITAG 75 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhC---CCcEEEEEeCCCcHHHHHHHHHHHhhhh-cCCCeEEEEcCCHHHhCCCCEEEEecC
Confidence 467888 99999999988876 33 8999998755321111 11111110 000011110 112224479999998
Q ss_pred ccCc-chhHHHHhHhhHHHHHHHHHHHhh
Q psy897 91 TLRF-DEELKIAIRTNICATQTVVKLAKQ 118 (125)
Q Consensus 91 ~~~~-~~~~~~~~~~Nv~g~~~l~~~~~~ 118 (125)
...- .....+.+..|+.-...+++...+
T Consensus 76 ~p~~~~~~r~e~~~~n~~i~~~i~~~i~~ 104 (300)
T cd01339 76 IPRKPGMSRDDLLGTNAKIVKEVAENIKK 104 (300)
T ss_pred CCCCcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 7532 222233445566655555554433
No 401
>COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism]
Probab=94.22 E-value=0.13 Score=35.92 Aligned_cols=38 Identities=21% Similarity=0.387 Sum_probs=29.4
Q ss_pred CceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCC
Q psy897 13 DGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERK 51 (125)
Q Consensus 13 ~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~ 51 (125)
+++|.|.|++|-+|+.|++.+.+. |+-.-+-+++|+++
T Consensus 2 ~iki~V~Ga~GRMG~~ii~~v~~~-~~~~L~aa~~~~~~ 39 (266)
T COG0289 2 MIKVAVAGASGRMGRTLIRAVLEA-PDLELVAAFDRPGS 39 (266)
T ss_pred CceEEEEcCCChHHHHHHHHHhcC-CCceEEEEEecCCc
Confidence 468999999999999999999887 44334445667554
No 402
>PRK00048 dihydrodipicolinate reductase; Provisional
Probab=94.16 E-value=0.14 Score=35.58 Aligned_cols=35 Identities=17% Similarity=0.286 Sum_probs=26.5
Q ss_pred ceEEEecCccchhHHHHHHHHHhCCCccEEEE-EecCC
Q psy897 14 GVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYI-LVRER 50 (125)
Q Consensus 14 ~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~-~~r~~ 50 (125)
++|.|+|++|.+|+.+++.+.+. ++ .++.. +++++
T Consensus 2 mkV~IiG~~G~mG~~i~~~l~~~-~~-~elvav~d~~~ 37 (257)
T PRK00048 2 IKVAVAGASGRMGRELIEAVEAA-ED-LELVAAVDRPG 37 (257)
T ss_pred cEEEEECCCCHHHHHHHHHHHhC-CC-CEEEEEEecCC
Confidence 58999999999999999888765 33 55555 55544
No 403
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=94.15 E-value=0.087 Score=37.84 Aligned_cols=33 Identities=12% Similarity=0.213 Sum_probs=26.5
Q ss_pred CceEEEecCccchhHHHHHHHHHhCCCccEEEEEec
Q psy897 13 DGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVR 48 (125)
Q Consensus 13 ~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r 48 (125)
+.++||+||+|.+|+..++-.... |..+++.+.
T Consensus 143 g~~VLV~gaaGgVG~~aiQlAk~~---G~~~v~~~~ 175 (326)
T COG0604 143 GETVLVHGAAGGVGSAAIQLAKAL---GATVVAVVS 175 (326)
T ss_pred CCEEEEecCCchHHHHHHHHHHHc---CCcEEEEec
Confidence 789999999999999998877777 545555444
No 404
>KOG4022|consensus
Probab=94.15 E-value=0.087 Score=34.42 Aligned_cols=35 Identities=14% Similarity=0.271 Sum_probs=29.2
Q ss_pred ceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCC
Q psy897 14 GVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERK 51 (125)
Q Consensus 14 ~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~ 51 (125)
.+|+|-||-|-+|+++++.+.++ ++-|..++..+.
T Consensus 4 grVivYGGkGALGSacv~~Fkan---nywV~siDl~eN 38 (236)
T KOG4022|consen 4 GRVIVYGGKGALGSACVEFFKAN---NYWVLSIDLSEN 38 (236)
T ss_pred ceEEEEcCcchHhHHHHHHHHhc---CeEEEEEeeccc
Confidence 58999999999999999999998 677777665433
No 405
>PRK13243 glyoxylate reductase; Reviewed
Probab=94.12 E-value=0.12 Score=37.32 Aligned_cols=38 Identities=21% Similarity=0.083 Sum_probs=32.5
Q ss_pred ccCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCC
Q psy897 10 FYKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERK 51 (125)
Q Consensus 10 ~~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~ 51 (125)
.+.+|++.|.|- |-||+.+++.|... |.+|++++|...
T Consensus 147 ~L~gktvgIiG~-G~IG~~vA~~l~~~---G~~V~~~d~~~~ 184 (333)
T PRK13243 147 DVYGKTIGIIGF-GRIGQAVARRAKGF---GMRILYYSRTRK 184 (333)
T ss_pred CCCCCEEEEECc-CHHHHHHHHHHHHC---CCEEEEECCCCC
Confidence 367899999986 99999999999887 789999988643
No 406
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=94.08 E-value=0.081 Score=35.99 Aligned_cols=38 Identities=13% Similarity=0.279 Sum_probs=30.6
Q ss_pred cccCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecC
Q psy897 9 DFYKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRE 49 (125)
Q Consensus 9 ~~~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~ 49 (125)
..+.+.+|+|.| .|.+|+++++.|... +..++.++|.+
T Consensus 17 ~~L~~~~VlivG-~GglGs~va~~La~~--Gvg~i~lvD~D 54 (228)
T cd00757 17 EKLKNARVLVVG-AGGLGSPAAEYLAAA--GVGKLGLVDDD 54 (228)
T ss_pred HHHhCCcEEEEC-CCHHHHHHHHHHHHc--CCCEEEEEcCC
Confidence 356778999997 778999999999998 45688888654
No 407
>PRK08818 prephenate dehydrogenase; Provisional
Probab=94.02 E-value=0.12 Score=37.81 Aligned_cols=35 Identities=20% Similarity=0.141 Sum_probs=30.4
Q ss_pred CceEEEecCccchhHHHHHHHHHhCCCccEEEEEecC
Q psy897 13 DGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRE 49 (125)
Q Consensus 13 ~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~ 49 (125)
.++|.|.|.+|.||..+++.|.+. . ++.|+++++.
T Consensus 4 ~~~I~IIGl~GliGgslA~alk~~-~-~~~V~g~D~~ 38 (370)
T PRK08818 4 QPVVGIVGSAGAYGRWLARFLRTR-M-QLEVIGHDPA 38 (370)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhc-C-CCEEEEEcCC
Confidence 478999999999999999999876 2 5889998874
No 408
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=94.01 E-value=0.11 Score=37.05 Aligned_cols=34 Identities=9% Similarity=0.016 Sum_probs=28.1
Q ss_pred ceEEEecCccchhHHHHHHHHHhCCCcc-EEEEEecCC
Q psy897 14 GVIFLTGGTGFMGKVLLDTLLRRFPSIH-SIYILVRER 50 (125)
Q Consensus 14 ~~vlitG~~G~iG~~i~~~l~~~~~~~~-~v~~~~r~~ 50 (125)
.+++|+|++|.+|...++..... |. +|+++++++
T Consensus 156 ~~VlI~ga~g~vG~~aiqlAk~~---G~~~Vi~~~~s~ 190 (345)
T cd08293 156 QTMVVSGAAGACGSLAGQIGRLL---GCSRVVGICGSD 190 (345)
T ss_pred CEEEEECCCcHHHHHHHHHHHHc---CCCEEEEEcCCH
Confidence 79999999999999988776666 66 788877644
No 409
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=93.96 E-value=0.12 Score=35.89 Aligned_cols=37 Identities=11% Similarity=0.184 Sum_probs=31.2
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCC
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRER 50 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~ 50 (125)
.++++++|+|++|.+|..+++.+... +.+|++.++++
T Consensus 143 ~~g~~vlI~g~~~~~g~~~~~~a~~~---g~~v~~~~~~~ 179 (325)
T cd08253 143 KAGETVLVHGGSGAVGHAAVQLARWA---GARVIATASSA 179 (325)
T ss_pred CCCCEEEEEcCCchHHHHHHHHHHHc---CCEEEEEeCCH
Confidence 35789999999999999998888777 68888887744
No 410
>cd00300 LDH_like L-lactate dehydrogenase-like enzymes. Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot
Probab=93.96 E-value=1.1 Score=31.90 Aligned_cols=99 Identities=13% Similarity=0.075 Sum_probs=55.2
Q ss_pred EEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCCCC-HHHHHHHhhhccCChhhhhh---hhcCccCCCeEEEeccc
Q psy897 16 IFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKGVS-PQERIEKMLDNEGPIFKDFA---NLVRLKTQRIRFIFLAT 91 (125)
Q Consensus 16 vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~l~---~~~~l~~~~~Vih~a~~ 91 (125)
|.|.|+ |.+|+.++..|+.. +-..++.++|....... ....+.+... ......+. +...+...|+||.++|.
T Consensus 1 i~iiGa-G~VG~~~a~~l~~~-~~~~el~l~D~~~~~~~g~~~DL~~~~~--~~~~~~i~~~~~~~~l~~aDiVIitag~ 76 (300)
T cd00300 1 ITIIGA-GNVGAAVAFALIAK-GLASELVLVDVNEEKAKGDALDLSHASA--FLATGTIVRGGDYADAADADIVVITAGA 76 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhc-CCCCEEEEEeCCccHHHHHHHhHHHhcc--ccCCCeEEECCCHHHhCCCCEEEEcCCC
Confidence 356775 88999999988877 11268999998665321 1112222211 00000110 01122234799999998
Q ss_pred cCc-chhHHHHhHhhHHHHHHHHHHHhh
Q psy897 92 LRF-DEELKIAIRTNICATQTVVKLAKQ 118 (125)
Q Consensus 92 ~~~-~~~~~~~~~~Nv~g~~~l~~~~~~ 118 (125)
.+- ..+-...+..|+.-...+.+..++
T Consensus 77 p~~~~~~R~~l~~~n~~i~~~~~~~i~~ 104 (300)
T cd00300 77 PRKPGETRLDLINRNAPILRSVITNLKK 104 (300)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 632 233445556788777777776554
No 411
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.93 E-value=0.32 Score=34.46 Aligned_cols=36 Identities=17% Similarity=0.233 Sum_probs=31.6
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecC
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRE 49 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~ 49 (125)
+.||++.|.|.++.+|+-++.-|.++ +..|.++...
T Consensus 156 l~Gk~vvViGrs~iVGkPla~lL~~~---~atVt~~hs~ 191 (285)
T PRK14189 156 LRGAHAVVIGRSNIVGKPMAMLLLQA---GATVTICHSK 191 (285)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHC---CCEEEEecCC
Confidence 56899999999999999999999988 7888887543
No 412
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=93.89 E-value=0.16 Score=32.68 Aligned_cols=35 Identities=20% Similarity=0.151 Sum_probs=28.2
Q ss_pred CceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCC
Q psy897 13 DGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERK 51 (125)
Q Consensus 13 ~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~ 51 (125)
+++|.+.|- |-+|+.+++.|++. ++.|++.+|++.
T Consensus 1 m~~Ig~IGl-G~mG~~~a~~L~~~---g~~v~~~d~~~~ 35 (163)
T PF03446_consen 1 MMKIGFIGL-GNMGSAMARNLAKA---GYEVTVYDRSPE 35 (163)
T ss_dssp -BEEEEE---SHHHHHHHHHHHHT---TTEEEEEESSHH
T ss_pred CCEEEEEch-HHHHHHHHHHHHhc---CCeEEeeccchh
Confidence 367888875 99999999999998 899999998654
No 413
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=93.79 E-value=0.15 Score=35.40 Aligned_cols=37 Identities=8% Similarity=0.105 Sum_probs=31.0
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCC
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRER 50 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~ 50 (125)
.++.+++|+|++|.+|..+++.+... |..|++.+++.
T Consensus 138 ~~~~~vlv~g~~~~ig~~~~~~~~~~---g~~v~~~~~~~ 174 (323)
T cd05276 138 KAGETVLIHGGASGVGTAAIQLAKAL---GARVIATAGSE 174 (323)
T ss_pred CCCCEEEEEcCcChHHHHHHHHHHHc---CCEEEEEcCCH
Confidence 35789999999999999998888887 68888877643
No 414
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=93.79 E-value=0.14 Score=36.91 Aligned_cols=37 Identities=11% Similarity=0.100 Sum_probs=29.7
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCC
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRER 50 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~ 50 (125)
.++.+++|.|++|.+|...++..... |.+|++.++++
T Consensus 157 ~~g~~VlV~GaaG~vG~~aiqlAk~~---G~~Vi~~~~~~ 193 (348)
T PLN03154 157 KKGDSVFVSAASGAVGQLVGQLAKLH---GCYVVGSAGSS 193 (348)
T ss_pred CCCCEEEEecCccHHHHHHHHHHHHc---CCEEEEEcCCH
Confidence 34789999999999999988777666 67888776543
No 415
>PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional
Probab=93.71 E-value=0.16 Score=36.39 Aligned_cols=35 Identities=17% Similarity=0.327 Sum_probs=26.9
Q ss_pred CceEEEecCccchhHHHHHHHHHhCCCccEEEEEecC
Q psy897 13 DGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRE 49 (125)
Q Consensus 13 ~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~ 49 (125)
+.+|.|.||+|+.|..|++-|.+. |. .++..+..+
T Consensus 2 ~~~VaIvGAtGy~G~eLlrlL~~h-p~-~~l~~~~s~ 36 (313)
T PRK11863 2 KPKVFIDGEAGTTGLQIRERLAGR-SD-IELLSIPEA 36 (313)
T ss_pred CcEEEEECCCCHHHHHHHHHHhcC-CC-eEEEEEecC
Confidence 358999999999999999988877 43 555555443
No 416
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=93.70 E-value=0.11 Score=35.02 Aligned_cols=38 Identities=16% Similarity=0.270 Sum_probs=31.2
Q ss_pred cccCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecC
Q psy897 9 DFYKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRE 49 (125)
Q Consensus 9 ~~~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~ 49 (125)
..++..+|+|.| .|.+|+.+++.|... +..++.++|.+
T Consensus 24 ~~L~~~~V~ViG-~GglGs~ia~~La~~--Gvg~i~lvD~D 61 (212)
T PRK08644 24 EKLKKAKVGIAG-AGGLGSNIAVALARS--GVGNLKLVDFD 61 (212)
T ss_pred HHHhCCCEEEEC-cCHHHHHHHHHHHHc--CCCeEEEEeCC
Confidence 456778999998 588999999999988 44678888876
No 417
>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=93.70 E-value=0.1 Score=36.70 Aligned_cols=34 Identities=12% Similarity=0.198 Sum_probs=29.8
Q ss_pred ceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCC
Q psy897 14 GVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERK 51 (125)
Q Consensus 14 ~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~ 51 (125)
++|.|.|+ |.+|..++..|++. +++|+++++++.
T Consensus 2 ~~V~VIG~-G~mG~~iA~~la~~---G~~V~~~d~~~~ 35 (288)
T PRK09260 2 EKLVVVGA-GVMGRGIAYVFAVS---GFQTTLVDIKQE 35 (288)
T ss_pred cEEEEECc-cHHHHHHHHHHHhC---CCcEEEEeCCHH
Confidence 56888877 99999999999988 799999998765
No 418
>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.66 E-value=0.44 Score=33.78 Aligned_cols=37 Identities=16% Similarity=0.204 Sum_probs=32.2
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCC
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRER 50 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~ 50 (125)
+.|++++|.|.+..+|+-++.-|..+ +..|.++....
T Consensus 162 l~Gk~vvViGrs~iVGkPla~lL~~~---~atVtv~hs~T 198 (287)
T PRK14176 162 IEGKNAVIVGHSNVVGKPMAAMLLNR---NATVSVCHVFT 198 (287)
T ss_pred CCCCEEEEECCCcccHHHHHHHHHHC---CCEEEEEeccC
Confidence 56899999999999999999999988 68888877543
No 419
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=93.66 E-value=0.17 Score=31.65 Aligned_cols=33 Identities=21% Similarity=0.304 Sum_probs=26.5
Q ss_pred eEEEecCccchhHHHHHHHHHhCCCccEEEEEecCC
Q psy897 15 VIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRER 50 (125)
Q Consensus 15 ~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~ 50 (125)
+|+|.|+ |.+|+++++.|... +..++.++|.+.
T Consensus 1 ~VliiG~-GglGs~ia~~L~~~--Gv~~i~ivD~d~ 33 (143)
T cd01483 1 RVLLVGL-GGLGSEIALNLARS--GVGKITLIDFDT 33 (143)
T ss_pred CEEEECC-CHHHHHHHHHHHHC--CCCEEEEEcCCC
Confidence 4788886 99999999999998 335788887653
No 420
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=93.59 E-value=0.16 Score=36.07 Aligned_cols=37 Identities=19% Similarity=0.166 Sum_probs=31.7
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCC
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERK 51 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~ 51 (125)
+.+++++|.|. |.+|+.++..|... |.+|.+++|++.
T Consensus 150 l~g~kvlViG~-G~iG~~~a~~L~~~---Ga~V~v~~r~~~ 186 (296)
T PRK08306 150 IHGSNVLVLGF-GRTGMTLARTLKAL---GANVTVGARKSA 186 (296)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHC---CCEEEEEECCHH
Confidence 35789999996 77999999999988 689999998754
No 421
>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]
Probab=93.54 E-value=0.14 Score=37.13 Aligned_cols=34 Identities=21% Similarity=0.348 Sum_probs=27.6
Q ss_pred CceEEEecCccchhHHHHHHHHHhCCCccEEEEEec
Q psy897 13 DGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVR 48 (125)
Q Consensus 13 ~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r 48 (125)
+.+|.|.|++||.|..|++.|... |+ .++...+.
T Consensus 2 ~~kV~IvGasGYtG~EL~rlL~~H-p~-ve~~~~ss 35 (349)
T COG0002 2 MIKVGIVGASGYTGLELLRLLAGH-PD-VELILISS 35 (349)
T ss_pred CceEEEEcCCCCcHHHHHHHHhcC-CC-eEEEEeec
Confidence 468999999999999999999887 55 45555543
No 422
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=93.52 E-value=0.13 Score=36.03 Aligned_cols=34 Identities=21% Similarity=0.319 Sum_probs=28.8
Q ss_pred ceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCC
Q psy897 14 GVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERK 51 (125)
Q Consensus 14 ~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~ 51 (125)
|+|.|.|+ |-+|..++..|.+. |++|.+++|++.
T Consensus 1 m~I~IiG~-G~~G~~~a~~L~~~---g~~V~~~~r~~~ 34 (304)
T PRK06522 1 MKIAILGA-GAIGGLFGAALAQA---GHDVTLVARRGA 34 (304)
T ss_pred CEEEEECC-CHHHHHHHHHHHhC---CCeEEEEECChH
Confidence 46888886 99999999999987 799999998543
No 423
>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional
Probab=93.50 E-value=0.19 Score=37.06 Aligned_cols=35 Identities=29% Similarity=0.384 Sum_probs=28.6
Q ss_pred CceEEEecCccchhHHHHHHHHHhCCCccEEEEEec
Q psy897 13 DGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVR 48 (125)
Q Consensus 13 ~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r 48 (125)
+|+|.|.|+||.||+.-++.+.+. |+..+|..+.-
T Consensus 1 mk~VaILGsTGSIG~~tL~vi~~~-p~~f~VvaLaa 35 (385)
T PRK05447 1 MKRITILGSTGSIGTQTLDVIRRN-PDRFRVVALSA 35 (385)
T ss_pred CceEEEEcCChHHHHHHHHHHHhC-ccccEEEEEEc
Confidence 378999999999999988777654 55688888864
No 424
>PLN02256 arogenate dehydrogenase
Probab=93.44 E-value=0.17 Score=36.03 Aligned_cols=36 Identities=22% Similarity=0.334 Sum_probs=30.4
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCC
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRER 50 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~ 50 (125)
..+++|.|.| .|.+|..++..|.+. +.+|++++++.
T Consensus 34 ~~~~kI~IIG-~G~mG~slA~~L~~~---G~~V~~~d~~~ 69 (304)
T PLN02256 34 SRKLKIGIVG-FGNFGQFLAKTFVKQ---GHTVLATSRSD 69 (304)
T ss_pred CCCCEEEEEe-eCHHHHHHHHHHHhC---CCEEEEEECcc
Confidence 3467899998 799999999999887 68899988764
No 425
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=93.44 E-value=0.13 Score=37.36 Aligned_cols=39 Identities=21% Similarity=0.213 Sum_probs=31.6
Q ss_pred cccCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCC
Q psy897 9 DFYKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRER 50 (125)
Q Consensus 9 ~~~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~ 50 (125)
..+++.+|+|.|+ |++|+.+++.|... +..++.++|.+.
T Consensus 24 ~~L~~~~VlivG~-GGlGs~~a~~La~~--Gvg~i~lvD~D~ 62 (355)
T PRK05597 24 QSLFDAKVAVIGA-GGLGSPALLYLAGA--GVGHITIIDDDT 62 (355)
T ss_pred HHHhCCeEEEECC-CHHHHHHHHHHHHc--CCCeEEEEeCCE
Confidence 3467789999976 88999999999988 457888888753
No 426
>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated
Probab=93.38 E-value=0.15 Score=36.20 Aligned_cols=34 Identities=26% Similarity=0.332 Sum_probs=29.0
Q ss_pred ceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCC
Q psy897 14 GVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERK 51 (125)
Q Consensus 14 ~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~ 51 (125)
++|.|.| .|.+|+.++..|++. +++|.+++|++.
T Consensus 2 mkI~iiG-~G~mG~~~a~~L~~~---g~~V~~~~r~~~ 35 (325)
T PRK00094 2 MKIAVLG-AGSWGTALAIVLARN---GHDVTLWARDPE 35 (325)
T ss_pred CEEEEEC-CCHHHHHHHHHHHhC---CCEEEEEECCHH
Confidence 5788997 599999999999988 789999988643
No 427
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=93.33 E-value=0.18 Score=37.66 Aligned_cols=37 Identities=16% Similarity=0.099 Sum_probs=31.9
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCC
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERK 51 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~ 51 (125)
+.+++++|+|. |.||+.+++.+... |.+|+++++++.
T Consensus 210 l~Gk~VlViG~-G~IG~~vA~~lr~~---Ga~ViV~d~dp~ 246 (425)
T PRK05476 210 IAGKVVVVAGY-GDVGKGCAQRLRGL---GARVIVTEVDPI 246 (425)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhC---CCEEEEEcCCch
Confidence 57899999995 89999999999988 789999887654
No 428
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=93.32 E-value=0.13 Score=35.95 Aligned_cols=34 Identities=26% Similarity=0.277 Sum_probs=28.7
Q ss_pred ceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCC
Q psy897 14 GVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERK 51 (125)
Q Consensus 14 ~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~ 51 (125)
++|.|.| .|.+|..++..|.+. +++|.++++++.
T Consensus 1 m~I~IIG-~G~mG~sla~~L~~~---g~~V~~~d~~~~ 34 (279)
T PRK07417 1 MKIGIVG-LGLIGGSLGLDLRSL---GHTVYGVSRRES 34 (279)
T ss_pred CeEEEEe-ecHHHHHHHHHHHHC---CCEEEEEECCHH
Confidence 3688887 899999999999988 789999988643
No 429
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=93.31 E-value=0.21 Score=35.16 Aligned_cols=38 Identities=13% Similarity=0.141 Sum_probs=30.9
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCC
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERK 51 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~ 51 (125)
+++++++|.|+ |..|++++..|.+. +..+|+++.|+..
T Consensus 123 ~~~k~vlvlGa-GGaarai~~aL~~~--G~~~i~I~nRt~~ 160 (282)
T TIGR01809 123 LAGFRGLVIGA-GGTSRAAVYALASL--GVTDITVINRNPD 160 (282)
T ss_pred cCCceEEEEcC-cHHHHHHHHHHHHc--CCCeEEEEeCCHH
Confidence 45788999975 88999999999988 3468999998654
No 430
>TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form. This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment.
Probab=93.29 E-value=0.16 Score=36.35 Aligned_cols=31 Identities=19% Similarity=0.375 Sum_probs=25.3
Q ss_pred eEEEecCccchhHHHHHHHHHhCCCccEEEEEe
Q psy897 15 VIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILV 47 (125)
Q Consensus 15 ~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~ 47 (125)
+|.|.|++||.|..|++.|... |+ .++..+.
T Consensus 3 ~v~IvGasGy~G~el~rlL~~H-P~-~el~~l~ 33 (310)
T TIGR01851 3 KVFIDGEAGTTGLQIRERLSGR-DD-IELLSIA 33 (310)
T ss_pred eEEEECCCChhHHHHHHHHhCC-CC-eEEEEEe
Confidence 6999999999999999999887 55 5555554
No 431
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=93.29 E-value=0.21 Score=34.03 Aligned_cols=36 Identities=19% Similarity=0.323 Sum_probs=30.8
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCcc--EEEEEecC
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIH--SIYILVRE 49 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~--~v~~~~r~ 49 (125)
+++++++|.|+ |..|..++..|.+. +.. +|++++|.
T Consensus 23 l~~~rvlvlGA-GgAg~aiA~~L~~~--G~~~~~i~ivdr~ 60 (226)
T cd05311 23 IEEVKIVINGA-GAAGIAIARLLLAA--GAKPENIVVVDSK 60 (226)
T ss_pred ccCCEEEEECc-hHHHHHHHHHHHHc--CcCcceEEEEeCC
Confidence 56789999988 88999999999887 335 79999997
No 432
>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]
Probab=93.24 E-value=0.21 Score=35.23 Aligned_cols=35 Identities=26% Similarity=0.317 Sum_probs=27.6
Q ss_pred ceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCC
Q psy897 14 GVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKG 52 (125)
Q Consensus 14 ~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~ 52 (125)
++|+|.| .|.||..+++.|.+. ++.+.+++++...
T Consensus 4 ~~v~IvG-~GliG~s~a~~l~~~---g~~v~i~g~d~~~ 38 (279)
T COG0287 4 MKVGIVG-LGLMGGSLARALKEA---GLVVRIIGRDRSA 38 (279)
T ss_pred cEEEEEC-CchHHHHHHHHHHHc---CCeEEEEeecCcH
Confidence 4555555 999999999999998 7888787776553
No 433
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=93.24 E-value=0.18 Score=37.43 Aligned_cols=38 Identities=32% Similarity=0.490 Sum_probs=31.6
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCC
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERK 51 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~ 51 (125)
+.+++++|.|+ |-+|..+++.|... +..+|++++|+..
T Consensus 178 l~~~~VlViGa-G~iG~~~a~~L~~~--G~~~V~v~~rs~~ 215 (417)
T TIGR01035 178 LKGKKALLIGA-GEMGELVAKHLLRK--GVGKILIANRTYE 215 (417)
T ss_pred ccCCEEEEECC-hHHHHHHHHHHHHC--CCCEEEEEeCCHH
Confidence 56789999986 99999999999887 2378999988654
No 434
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=93.21 E-value=0.32 Score=30.75 Aligned_cols=37 Identities=19% Similarity=0.276 Sum_probs=32.9
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCC
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRER 50 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~ 50 (125)
++||++.|.|.+.-+|+-++..|.++ +..|..+.+..
T Consensus 26 ~~gk~v~VvGrs~~vG~pla~lL~~~---gatV~~~~~~t 62 (140)
T cd05212 26 LDGKKVLVVGRSGIVGAPLQCLLQRD---GATVYSCDWKT 62 (140)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC---CCEEEEeCCCC
Confidence 67999999999999999999999988 79998887544
No 435
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.18 E-value=0.67 Score=32.83 Aligned_cols=35 Identities=20% Similarity=0.229 Sum_probs=31.0
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEec
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVR 48 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r 48 (125)
+.||+++|.|.+..+|+-++..|+++ +..|.++..
T Consensus 155 l~Gk~vvVvGrs~~VG~Pla~lL~~~---gAtVtv~hs 189 (285)
T PRK14191 155 IKGKDVVIIGASNIVGKPLAMLMLNA---GASVSVCHI 189 (285)
T ss_pred CCCCEEEEECCCchhHHHHHHHHHHC---CCEEEEEeC
Confidence 56999999999999999999999988 788888753
No 436
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=93.11 E-value=0.22 Score=35.91 Aligned_cols=38 Identities=16% Similarity=0.042 Sum_probs=32.0
Q ss_pred ccCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCC
Q psy897 10 FYKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERK 51 (125)
Q Consensus 10 ~~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~ 51 (125)
.+.++++.|.| .|.||+.+++.|... |.+|++.++.+.
T Consensus 143 ~l~g~~VgIIG-~G~IG~~vA~~L~~~---G~~V~~~d~~~~ 180 (330)
T PRK12480 143 PVKNMTVAIIG-TGRIGAATAKIYAGF---GATITAYDAYPN 180 (330)
T ss_pred ccCCCEEEEEC-CCHHHHHHHHHHHhC---CCEEEEEeCChh
Confidence 36788999996 588999999999887 799999998653
No 437
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=93.11 E-value=0.23 Score=35.05 Aligned_cols=38 Identities=13% Similarity=0.223 Sum_probs=30.8
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCC
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERK 51 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~ 51 (125)
.++++++|.|+ |+.|++++..|.+. +..+|+++.|...
T Consensus 125 ~~~k~vlilGa-GGaarAi~~aL~~~--g~~~i~i~nR~~~ 162 (283)
T PRK14027 125 AKLDSVVQVGA-GGVGNAVAYALVTH--GVQKLQVADLDTS 162 (283)
T ss_pred cCCCeEEEECC-cHHHHHHHHHHHHC--CCCEEEEEcCCHH
Confidence 34688999987 88999999999987 3468999988654
No 438
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=93.10 E-value=0.19 Score=35.85 Aligned_cols=38 Identities=24% Similarity=0.377 Sum_probs=31.4
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCC
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERK 51 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~ 51 (125)
+.+++++|.|+ |-+|..+++.|... ++.+|++++|++.
T Consensus 176 l~~~~V~ViGa-G~iG~~~a~~L~~~--g~~~V~v~~r~~~ 213 (311)
T cd05213 176 LKGKKVLVIGA-GEMGELAAKHLAAK--GVAEITIANRTYE 213 (311)
T ss_pred ccCCEEEEECc-HHHHHHHHHHHHHc--CCCEEEEEeCCHH
Confidence 46899999987 99999999999875 3578988888654
No 439
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=93.09 E-value=0.21 Score=34.76 Aligned_cols=37 Identities=8% Similarity=0.100 Sum_probs=31.1
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCC
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRER 50 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~ 50 (125)
.++.+++|+|++|.+|..+++.+... +.++++++++.
T Consensus 143 ~~~~~vli~g~~~~~g~~~~~~~~~~---g~~v~~~~~~~ 179 (328)
T cd08268 143 RPGDSVLITAASSSVGLAAIQIANAA---GATVIATTRTS 179 (328)
T ss_pred CCCCEEEEecCccHHHHHHHHHHHHc---CCEEEEEcCCH
Confidence 35679999999999999998888877 78888887654
No 440
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.06 E-value=0.21 Score=35.34 Aligned_cols=33 Identities=15% Similarity=0.294 Sum_probs=30.6
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEE
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYIL 46 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~ 46 (125)
+.||++.|.|.+|.+|+-++..|+++ ++.|.++
T Consensus 156 l~Gk~v~vIG~S~ivG~Pla~lL~~~---gatVtv~ 188 (284)
T PRK14179 156 LEGKHAVVIGRSNIVGKPMAQLLLDK---NATVTLT 188 (284)
T ss_pred CCCCEEEEECCCCcCcHHHHHHHHHC---CCEEEEE
Confidence 57999999999999999999999998 7888887
No 441
>TIGR00243 Dxr 1-deoxy-D-xylulose 5-phosphate reductoisomerase. 1-deoxy-D-xylulose 5-phosphate is converted to 2-C-methyl-D-erythritol 4-phosphate in the presence of NADPH. It is involved in the synthesis of isopentenyl diphosphate (IPP), a basic building block in isoprenoid, thiamin, and pyridoxal biosynthesis.
Probab=93.02 E-value=0.21 Score=36.71 Aligned_cols=37 Identities=27% Similarity=0.432 Sum_probs=29.0
Q ss_pred ceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCC
Q psy897 14 GVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERK 51 (125)
Q Consensus 14 ~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~ 51 (125)
|++.|.|+||-||+.-.+-+.+. ++.++|.++.-...
T Consensus 2 k~i~IlGsTGSIG~qtL~Vi~~~-~~~f~v~~Laa~~n 38 (389)
T TIGR00243 2 KQIVILGSTGSIGKSTLDVVRHN-PDHFQVVALSAGKN 38 (389)
T ss_pred ceEEEEecChHHHHHHHHHHHhC-ccccEEEEEEcCCC
Confidence 78999999999999987766554 55688888865443
No 442
>PRK12409 D-amino acid dehydrogenase small subunit; Provisional
Probab=93.00 E-value=0.21 Score=36.59 Aligned_cols=33 Identities=24% Similarity=0.319 Sum_probs=28.1
Q ss_pred ceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCC
Q psy897 14 GVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRER 50 (125)
Q Consensus 14 ~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~ 50 (125)
.+|+|+| +|++|..++.+|.+. |.+|.++++..
T Consensus 2 ~~vvIIG-aG~~G~~~A~~La~~---g~~V~vle~~~ 34 (410)
T PRK12409 2 SHIAVIG-AGITGVTTAYALAQR---GYQVTVFDRHR 34 (410)
T ss_pred CEEEEEC-CCHHHHHHHHHHHHC---CCeEEEEeCCC
Confidence 4677776 599999999999998 79999999864
No 443
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=92.97 E-value=0.19 Score=34.01 Aligned_cols=36 Identities=11% Similarity=0.157 Sum_probs=29.7
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCC
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRER 50 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~ 50 (125)
.++.+++|+|+++ +|..+++.+... +.+|+++++++
T Consensus 133 ~~~~~vli~g~~~-~G~~~~~~a~~~---g~~v~~~~~~~ 168 (271)
T cd05188 133 KPGDTVLVLGAGG-VGLLAAQLAKAA---GARVIVTDRSD 168 (271)
T ss_pred CCCCEEEEECCCH-HHHHHHHHHHHc---CCeEEEEcCCH
Confidence 3578999999999 999998877776 68888887754
No 444
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=92.96 E-value=0.2 Score=37.23 Aligned_cols=36 Identities=22% Similarity=0.350 Sum_probs=31.1
Q ss_pred CCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCC
Q psy897 12 KDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERK 51 (125)
Q Consensus 12 ~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~ 51 (125)
..++++|.|+ |.+|+.+++.|.+. ++++.++++++.
T Consensus 230 ~~~~iiIiG~-G~~g~~l~~~L~~~---~~~v~vid~~~~ 265 (453)
T PRK09496 230 PVKRVMIVGG-GNIGYYLAKLLEKE---GYSVKLIERDPE 265 (453)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhC---CCeEEEEECCHH
Confidence 4688999998 99999999999887 789999987654
No 445
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=92.94 E-value=0.24 Score=37.32 Aligned_cols=36 Identities=17% Similarity=0.198 Sum_probs=30.4
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCC
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRER 50 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~ 50 (125)
+++++++|.|+ |++|..+++.|.+. |..|.++++.+
T Consensus 14 ~~~~~v~viG~-G~~G~~~A~~L~~~---G~~V~~~d~~~ 49 (480)
T PRK01438 14 WQGLRVVVAGL-GVSGFAAADALLEL---GARVTVVDDGD 49 (480)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHC---CCEEEEEeCCc
Confidence 56789999986 77999999999888 78999988654
No 446
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.85 E-value=0.66 Score=32.77 Aligned_cols=37 Identities=16% Similarity=0.266 Sum_probs=32.1
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCC
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRER 50 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~ 50 (125)
+.||++.|.|.+..+|+-++.-|.++ +..|.++....
T Consensus 156 l~Gk~vvViGrS~~VGkPla~lL~~~---~AtVt~chs~T 192 (278)
T PRK14172 156 IEGKEVVVIGRSNIVGKPVAQLLLNE---NATVTICHSKT 192 (278)
T ss_pred CCCCEEEEECCCccchHHHHHHHHHC---CCEEEEeCCCC
Confidence 57999999999999999999999887 68888876543
No 447
>KOG1496|consensus
Probab=92.84 E-value=0.081 Score=36.64 Aligned_cols=22 Identities=32% Similarity=0.510 Sum_probs=19.8
Q ss_pred ceEEEecCccchhHHHHHHHHH
Q psy897 14 GVIFLTGGTGFMGKVLLDTLLR 35 (125)
Q Consensus 14 ~~vlitG~~G~iG~~i~~~l~~ 35 (125)
-+|+|||++|.||++|+..+.+
T Consensus 5 irVlVtGAAGqI~ysll~~ia~ 26 (332)
T KOG1496|consen 5 IRVLVTGAAGQIGYSLLPMIAR 26 (332)
T ss_pred eEEEeecccchhhHHHHHHHcC
Confidence 4799999999999999988865
No 448
>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.79 E-value=0.69 Score=32.72 Aligned_cols=37 Identities=16% Similarity=0.199 Sum_probs=32.3
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCC
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRER 50 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~ 50 (125)
+.||++.|.|.+..+|+-++.-|.++ +..|.++....
T Consensus 156 l~Gk~vvViGrS~~VGkPla~lL~~~---~ATVt~chs~T 192 (282)
T PRK14180 156 TEGAYAVVVGASNVVGKPVSQLLLNA---KATVTTCHRFT 192 (282)
T ss_pred CCCCEEEEECCCCcchHHHHHHHHHC---CCEEEEEcCCC
Confidence 66999999999999999999999988 68888876543
No 449
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=92.78 E-value=0.23 Score=36.93 Aligned_cols=38 Identities=16% Similarity=0.291 Sum_probs=31.8
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCC
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERK 51 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~ 51 (125)
+++++++|.|+ |.+|+.++..|... +..+|+++.|...
T Consensus 179 l~~kkvlviGa-G~~a~~va~~L~~~--g~~~I~V~nRt~~ 216 (414)
T PRK13940 179 ISSKNVLIIGA-GQTGELLFRHVTAL--APKQIMLANRTIE 216 (414)
T ss_pred ccCCEEEEEcC-cHHHHHHHHHHHHc--CCCEEEEECCCHH
Confidence 56899999988 99999999999887 2368999988644
No 450
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=92.75 E-value=0.25 Score=34.68 Aligned_cols=37 Identities=5% Similarity=0.025 Sum_probs=31.2
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCC
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRER 50 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~ 50 (125)
.++.+++|+|+++.+|..+++.+... +.++++.+++.
T Consensus 165 ~~~~~vlI~g~~~~iG~~~~~~~~~~---g~~v~~~~~~~ 201 (342)
T cd08266 165 RPGETVLVHGAGSGVGSAAIQIAKLF---GATVIATAGSE 201 (342)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHc---CCEEEEEeCCH
Confidence 35789999999999999999888887 78888877654
No 451
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=92.74 E-value=0.25 Score=27.86 Aligned_cols=31 Identities=6% Similarity=0.009 Sum_probs=18.5
Q ss_pred ceEEEecCccchhHH--HHHHHHHhCCCccEEEEEec
Q psy897 14 GVIFLTGGTGFMGKV--LLDTLLRRFPSIHSIYILVR 48 (125)
Q Consensus 14 ~~vlitG~~G~iG~~--i~~~l~~~~~~~~~v~~~~r 48 (125)
|++||+|++++.|-+ |+..+ ..+.+.+.+..
T Consensus 40 K~VLViGaStGyGLAsRIa~aF----g~gA~TiGV~f 72 (78)
T PF12242_consen 40 KKVLVIGASTGYGLASRIAAAF----GAGADTIGVSF 72 (78)
T ss_dssp SEEEEES-SSHHHHHHHHHHHH----CC--EEEEEE-
T ss_pred ceEEEEecCCcccHHHHHHHHh----cCCCCEEEEee
Confidence 899999999988866 44333 12466666544
No 452
>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.71 E-value=0.72 Score=32.67 Aligned_cols=37 Identities=11% Similarity=0.111 Sum_probs=32.3
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCC
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRER 50 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~ 50 (125)
+.||++.|.|.+..+|+-++.-|+++ +..|.++....
T Consensus 157 l~Gk~vvViGrS~iVGkPla~lL~~~---~atVt~chs~T 193 (284)
T PRK14177 157 VTGKNAVVVGRSPILGKPMAMLLTEM---NATVTLCHSKT 193 (284)
T ss_pred CCCCEEEEECCCCcchHHHHHHHHHC---CCEEEEeCCCC
Confidence 56999999999999999999999988 68888876543
No 453
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=92.71 E-value=0.3 Score=28.19 Aligned_cols=33 Identities=33% Similarity=0.443 Sum_probs=26.1
Q ss_pred eEEEecCccchhHHHHHHHHHhCCCc---cEEEEE-ecCCC
Q psy897 15 VIFLTGGTGFMGKVLLDTLLRRFPSI---HSIYIL-VRERK 51 (125)
Q Consensus 15 ~vlitG~~G~iG~~i~~~l~~~~~~~---~~v~~~-~r~~~ 51 (125)
+|.+. |+|-+|++|++.|++. + .+|.+. +|++.
T Consensus 1 kI~iI-G~G~mg~al~~~l~~~---g~~~~~v~~~~~r~~~ 37 (96)
T PF03807_consen 1 KIGII-GAGNMGSALARGLLAS---GIKPHEVIIVSSRSPE 37 (96)
T ss_dssp EEEEE-STSHHHHHHHHHHHHT---TS-GGEEEEEEESSHH
T ss_pred CEEEE-CCCHHHHHHHHHHHHC---CCCceeEEeeccCcHH
Confidence 35566 8999999999999998 5 888855 66544
No 454
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=92.71 E-value=0.25 Score=34.73 Aligned_cols=36 Identities=19% Similarity=0.304 Sum_probs=29.8
Q ss_pred CceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCC
Q psy897 13 DGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERK 51 (125)
Q Consensus 13 ~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~ 51 (125)
+.+++|.|++|.+|..+++..... |.+|++.++++.
T Consensus 147 ~~~vlI~g~~g~vg~~~~~~a~~~---g~~v~~~~~~~~ 182 (326)
T cd08289 147 QGPVLVTGATGGVGSLAVSILAKL---GYEVVASTGKAD 182 (326)
T ss_pred CCEEEEEcCCchHHHHHHHHHHHC---CCeEEEEecCHH
Confidence 579999999999999988877777 688888876543
No 455
>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=92.65 E-value=0.22 Score=34.96 Aligned_cols=34 Identities=12% Similarity=0.108 Sum_probs=29.3
Q ss_pred ceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCC
Q psy897 14 GVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERK 51 (125)
Q Consensus 14 ~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~ 51 (125)
++|.|.| +|.+|..++..++.. |++|++.++++.
T Consensus 4 ~kIaViG-aG~mG~~iA~~la~~---G~~V~l~d~~~~ 37 (287)
T PRK08293 4 KNVTVAG-AGVLGSQIAFQTAFH---GFDVTIYDISDE 37 (287)
T ss_pred cEEEEEC-CCHHHHHHHHHHHhc---CCeEEEEeCCHH
Confidence 5788886 599999999999887 799999998655
No 456
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=92.62 E-value=0.27 Score=34.23 Aligned_cols=37 Identities=8% Similarity=0.151 Sum_probs=30.4
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCC
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRER 50 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~ 50 (125)
.++.+++|+|++|.+|..+.+..... |.+|+++.++.
T Consensus 138 ~~~~~vlv~g~~~~~g~~~~~~a~~~---g~~v~~~~~~~ 174 (325)
T TIGR02824 138 KAGETVLIHGGASGIGTTAIQLAKAF---GARVFTTAGSD 174 (325)
T ss_pred CCCCEEEEEcCcchHHHHHHHHHHHc---CCEEEEEeCCH
Confidence 34789999999999999988877777 68888877644
No 457
>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.61 E-value=0.74 Score=32.65 Aligned_cols=37 Identities=19% Similarity=0.295 Sum_probs=31.9
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCC
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRER 50 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~ 50 (125)
+.||++.|.|.+..+|+-++.-|+++ +..|.++....
T Consensus 153 l~Gk~vvViGrS~iVGkPla~lL~~~---~aTVtichs~T 189 (287)
T PRK14173 153 LAGKEVVVVGRSNIVGKPLAALLLRE---DATVTLAHSKT 189 (287)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHC---CCEEEEeCCCC
Confidence 56899999999999999999999887 68888776543
No 458
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=92.58 E-value=0.29 Score=34.51 Aligned_cols=38 Identities=16% Similarity=0.176 Sum_probs=30.4
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCC
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERK 51 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~ 51 (125)
.++++++|.|+ |+.|++++..|... +..+|++++|+..
T Consensus 125 ~~~k~vlIlGa-GGaaraia~aL~~~--G~~~I~I~nR~~~ 162 (284)
T PRK12549 125 ASLERVVQLGA-GGAGAAVAHALLTL--GVERLTIFDVDPA 162 (284)
T ss_pred ccCCEEEEECC-cHHHHHHHHHHHHc--CCCEEEEECCCHH
Confidence 45688999986 66999999999987 2358999998654
No 459
>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=92.48 E-value=0.22 Score=35.02 Aligned_cols=34 Identities=24% Similarity=0.318 Sum_probs=29.2
Q ss_pred ceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCC
Q psy897 14 GVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERK 51 (125)
Q Consensus 14 ~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~ 51 (125)
++|.|.| +|.+|..|+..++.. |++|+++++++.
T Consensus 4 ~~I~ViG-aG~mG~~iA~~la~~---G~~V~l~d~~~~ 37 (291)
T PRK06035 4 KVIGVVG-SGVMGQGIAQVFART---GYDVTIVDVSEE 37 (291)
T ss_pred cEEEEEC-ccHHHHHHHHHHHhc---CCeEEEEeCCHH
Confidence 5788886 599999999999988 789999998665
No 460
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=92.44 E-value=0.27 Score=34.64 Aligned_cols=37 Identities=8% Similarity=0.018 Sum_probs=30.1
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCC
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRER 50 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~ 50 (125)
.++.+++|.|++|.+|..+++..... +.+|+++++++
T Consensus 138 ~~~~~vlI~ga~g~ig~~~~~~a~~~---g~~v~~~~~~~ 174 (329)
T cd08250 138 KSGETVLVTAAAGGTGQFAVQLAKLA---GCHVIGTCSSD 174 (329)
T ss_pred CCCCEEEEEeCccHHHHHHHHHHHHc---CCeEEEEeCcH
Confidence 45789999999999999988777766 67888877654
No 461
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.42 E-value=1 Score=31.88 Aligned_cols=35 Identities=14% Similarity=0.191 Sum_probs=31.2
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEec
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVR 48 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r 48 (125)
+.||++.|.|.+..+|+-++.-|+++ +..|.++..
T Consensus 156 l~Gk~vvViGrS~iVG~Pla~lL~~~---~atVt~chs 190 (284)
T PRK14190 156 ISGKHVVVVGRSNIVGKPVGQLLLNE---NATVTYCHS 190 (284)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHC---CCEEEEEeC
Confidence 57999999999999999999999888 688888754
No 462
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=92.41 E-value=0.23 Score=35.00 Aligned_cols=35 Identities=14% Similarity=0.172 Sum_probs=30.4
Q ss_pred ceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCC
Q psy897 14 GVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKG 52 (125)
Q Consensus 14 ~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~ 52 (125)
++|.|.|+ |.+|..|+..++.. |+.|+++++++..
T Consensus 6 ~~V~ViGa-G~mG~~iA~~~a~~---G~~V~l~d~~~~~ 40 (286)
T PRK07819 6 QRVGVVGA-GQMGAGIAEVCARA---GVDVLVFETTEEL 40 (286)
T ss_pred cEEEEEcc-cHHHHHHHHHHHhC---CCEEEEEECCHHH
Confidence 47888876 99999999999988 8999999987664
No 463
>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=92.34 E-value=0.35 Score=34.35 Aligned_cols=36 Identities=19% Similarity=0.242 Sum_probs=30.4
Q ss_pred CCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCC
Q psy897 12 KDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERK 51 (125)
Q Consensus 12 ~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~ 51 (125)
.+++|.|. |+|-+|+.++..|.+. +++|.+.+|+..
T Consensus 3 ~~m~I~ii-G~G~~G~~lA~~l~~~---G~~V~~~~r~~~ 38 (308)
T PRK14619 3 QPKTIAIL-GAGAWGSTLAGLASAN---GHRVRVWSRRSG 38 (308)
T ss_pred CCCEEEEE-CccHHHHHHHHHHHHC---CCEEEEEeCCCC
Confidence 35678888 5699999999999998 799999998754
No 464
>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.23 E-value=0.87 Score=32.48 Aligned_cols=36 Identities=19% Similarity=0.156 Sum_probs=31.4
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecC
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRE 49 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~ 49 (125)
+.||++.|.|.+..+|+-++.-|.++ +..|.++...
T Consensus 156 l~Gk~vvVIGrS~iVGkPla~lL~~~---~atVtv~hs~ 191 (297)
T PRK14186 156 IAGKKAVVVGRSILVGKPLALMLLAA---NATVTIAHSR 191 (297)
T ss_pred CCCCEEEEECCCccchHHHHHHHHHC---CCEEEEeCCC
Confidence 56899999999999999999999988 6888887543
No 465
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=92.20 E-value=0.45 Score=29.49 Aligned_cols=34 Identities=18% Similarity=0.381 Sum_probs=26.3
Q ss_pred CceEEEecCccchhHHHHHHHHHhCCCccEEEEEecC
Q psy897 13 DGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRE 49 (125)
Q Consensus 13 ~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~ 49 (125)
+++|+|.| .|.+|+.+++.|... +..++.++|.+
T Consensus 2 ~~~v~iiG-~G~vGs~va~~L~~~--Gv~~i~lvD~d 35 (135)
T PF00899_consen 2 NKRVLIIG-AGGVGSEVAKNLARS--GVGKITLVDDD 35 (135)
T ss_dssp T-EEEEES-TSHHHHHHHHHHHHH--TTSEEEEEESS
T ss_pred CCEEEEEC-cCHHHHHHHHHHHHh--CCCceeecCCc
Confidence 46788875 577999999999998 44688888764
No 466
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=92.19 E-value=0.29 Score=34.44 Aligned_cols=36 Identities=8% Similarity=0.063 Sum_probs=30.0
Q ss_pred CCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCC
Q psy897 12 KDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRER 50 (125)
Q Consensus 12 ~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~ 50 (125)
++.+++|.|++|.+|..+++.+.+. |.+|++.++++
T Consensus 145 ~~~~vlI~g~~g~ig~~~~~~a~~~---G~~vi~~~~~~ 180 (329)
T cd05288 145 PGETVVVSAAAGAVGSVVGQIAKLL---GARVVGIAGSD 180 (329)
T ss_pred CCCEEEEecCcchHHHHHHHHHHHc---CCEEEEEeCCH
Confidence 4689999999999999998887777 67888877644
No 467
>PLN02928 oxidoreductase family protein
Probab=92.12 E-value=0.31 Score=35.40 Aligned_cols=36 Identities=19% Similarity=0.142 Sum_probs=31.3
Q ss_pred ccCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecC
Q psy897 10 FYKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRE 49 (125)
Q Consensus 10 ~~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~ 49 (125)
.+.+|++.|.|- |-||+.+++.|... |.+|++++|+
T Consensus 156 ~l~gktvGIiG~-G~IG~~vA~~l~af---G~~V~~~dr~ 191 (347)
T PLN02928 156 TLFGKTVFILGY-GAIGIELAKRLRPF---GVKLLATRRS 191 (347)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHhhC---CCEEEEECCC
Confidence 366899999975 99999999999888 7899999885
No 468
>PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed
Probab=92.08 E-value=0.44 Score=34.80 Aligned_cols=36 Identities=19% Similarity=0.219 Sum_probs=30.6
Q ss_pred CceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCCC
Q psy897 13 DGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERKG 52 (125)
Q Consensus 13 ~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~~ 52 (125)
+++|+|.|| |.+|+-++.+..+. |++|++++.++..
T Consensus 2 ~~~igilG~-Gql~~ml~~aa~~l---G~~v~~~d~~~~~ 37 (372)
T PRK06019 2 MKTIGIIGG-GQLGRMLALAAAPL---GYKVIVLDPDPDS 37 (372)
T ss_pred CCEEEEECC-CHHHHHHHHHHHHc---CCEEEEEeCCCCC
Confidence 478999998 69999999999888 8999999876543
No 469
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=91.99 E-value=0.35 Score=31.55 Aligned_cols=33 Identities=15% Similarity=0.235 Sum_probs=26.5
Q ss_pred eEEEecCccchhHHHHHHHHHhCCCccEEEEEecCC
Q psy897 15 VIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRER 50 (125)
Q Consensus 15 ~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~ 50 (125)
+|+|.| .|.+|+.+++.|.+. +..++.++|.+.
T Consensus 1 ~VlViG-~GglGs~ia~~La~~--Gvg~i~lvD~D~ 33 (174)
T cd01487 1 KVGIAG-AGGLGSNIAVLLARS--GVGNLKLVDFDV 33 (174)
T ss_pred CEEEEC-cCHHHHHHHHHHHHc--CCCeEEEEeCCE
Confidence 477887 588999999999988 345799988764
No 470
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=91.98 E-value=0.76 Score=33.15 Aligned_cols=37 Identities=14% Similarity=0.158 Sum_probs=31.6
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCC
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERK 51 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~ 51 (125)
+.+|++.|.| .|-||+++++.+... +-+|...+|.+.
T Consensus 144 l~gktvGIiG-~GrIG~avA~r~~~F---gm~v~y~~~~~~ 180 (324)
T COG1052 144 LRGKTLGIIG-LGRIGQAVARRLKGF---GMKVLYYDRSPN 180 (324)
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHhcC---CCEEEEECCCCC
Confidence 5689999995 899999999999866 789999998764
No 471
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=91.95 E-value=1 Score=31.91 Aligned_cols=36 Identities=11% Similarity=0.243 Sum_probs=31.3
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecC
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRE 49 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~ 49 (125)
+.||++.|.|.+..+|+-++.-|+++ +..|.++...
T Consensus 154 l~Gk~vvViGrS~iVGkPla~lL~~~---~atVtichs~ 189 (282)
T PRK14169 154 VAGKRVVIVGRSNIVGRPLAGLMVNH---DATVTIAHSK 189 (282)
T ss_pred CCCCEEEEECCCccchHHHHHHHHHC---CCEEEEECCC
Confidence 57999999999999999999999887 6888877543
No 472
>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]. The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....
Probab=91.92 E-value=0.38 Score=31.78 Aligned_cols=34 Identities=21% Similarity=0.280 Sum_probs=25.3
Q ss_pred ceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCC
Q psy897 14 GVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERK 51 (125)
Q Consensus 14 ~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~ 51 (125)
|+|.|. |.||+|--++..|++. |++|++++.++.
T Consensus 1 M~I~Vi-GlGyvGl~~A~~lA~~---G~~V~g~D~~~~ 34 (185)
T PF03721_consen 1 MKIAVI-GLGYVGLPLAAALAEK---GHQVIGVDIDEE 34 (185)
T ss_dssp -EEEEE---STTHHHHHHHHHHT---TSEEEEE-S-HH
T ss_pred CEEEEE-CCCcchHHHHHHHHhC---CCEEEEEeCChH
Confidence 467777 7999999999999998 899999987543
No 473
>TIGR00036 dapB dihydrodipicolinate reductase.
Probab=91.91 E-value=0.46 Score=33.20 Aligned_cols=34 Identities=21% Similarity=0.331 Sum_probs=26.6
Q ss_pred ceEEEecCccchhHHHHHHHHHhCCCccEEEE-EecC
Q psy897 14 GVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYI-LVRE 49 (125)
Q Consensus 14 ~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~-~~r~ 49 (125)
.+|.|.|++|.+|+.+++.+.+. |+ .++.. ++|.
T Consensus 2 ikV~IiGa~G~MG~~i~~~i~~~-~~-~elvav~d~~ 36 (266)
T TIGR00036 2 IKVAVAGAAGRMGRELIKAALAA-EG-LQLVAAFERH 36 (266)
T ss_pred eEEEEECCCCHHHHHHHHHHHhC-CC-CEEEEEEecC
Confidence 58999999999999999999876 44 55555 4543
No 474
>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=91.88 E-value=0.96 Score=32.21 Aligned_cols=37 Identities=14% Similarity=0.166 Sum_probs=32.3
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCC
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRER 50 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~ 50 (125)
+.||++.|.|.+..+|+-++.-|+++ +..|.++....
T Consensus 158 l~Gk~vvViGrS~iVGkPla~lL~~~---~aTVt~chs~T 194 (294)
T PRK14187 158 LSGSDAVVIGRSNIVGKPMACLLLGE---NCTVTTVHSAT 194 (294)
T ss_pred CCCCEEEEECCCccchHHHHHHHhhC---CCEEEEeCCCC
Confidence 66999999999999999999999988 68888876543
No 475
>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase. NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (
Probab=91.83 E-value=0.47 Score=34.05 Aligned_cols=38 Identities=16% Similarity=0.238 Sum_probs=27.7
Q ss_pred CCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCC
Q psy897 12 KDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERK 51 (125)
Q Consensus 12 ~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~ 51 (125)
.+.+++|+|+ |.+|...++.+.+.. ++.+|+++++++.
T Consensus 163 ~g~~VlV~G~-G~vGl~~~~~a~~~~-g~~~vi~~~~~~~ 200 (341)
T cd08237 163 DRNVIGVWGD-GNLGYITALLLKQIY-PESKLVVFGKHQE 200 (341)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHhc-CCCcEEEEeCcHh
Confidence 4789999995 999999877766521 2367888887644
No 476
>KOG0023|consensus
Probab=91.80 E-value=0.52 Score=34.03 Aligned_cols=36 Identities=11% Similarity=0.122 Sum_probs=28.9
Q ss_pred CCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCC
Q psy897 12 KDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERK 51 (125)
Q Consensus 12 ~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~ 51 (125)
.++.+.|+|+.| +|+-=++.-.+- |.+|++++++..
T Consensus 181 pG~~vgI~GlGG-LGh~aVq~AKAM---G~rV~vis~~~~ 216 (360)
T KOG0023|consen 181 PGKWVGIVGLGG-LGHMAVQYAKAM---GMRVTVISTSSK 216 (360)
T ss_pred CCcEEEEecCcc-cchHHHHHHHHh---CcEEEEEeCCch
Confidence 589999999999 997655555555 799999999764
No 477
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=91.79 E-value=0.37 Score=35.93 Aligned_cols=37 Identities=19% Similarity=0.323 Sum_probs=30.7
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCc-cEEEEEecCCC
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSI-HSIYILVRERK 51 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~-~~v~~~~r~~~ 51 (125)
+.+++++|.|+ |-+|..+++.|... | .+|++.+|++.
T Consensus 180 ~~~~~vlViGa-G~iG~~~a~~L~~~---G~~~V~v~~r~~~ 217 (423)
T PRK00045 180 LSGKKVLVIGA-GEMGELVAKHLAEK---GVRKITVANRTLE 217 (423)
T ss_pred ccCCEEEEECc-hHHHHHHHHHHHHC---CCCeEEEEeCCHH
Confidence 56789999986 99999999999877 5 48888888654
No 478
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=91.79 E-value=1.1 Score=31.83 Aligned_cols=37 Identities=16% Similarity=0.226 Sum_probs=31.7
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCC
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRER 50 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~ 50 (125)
+.||++.|.|.+..+|+-++.-|+++ +..|.++....
T Consensus 155 l~Gk~vvVvGrS~iVGkPla~lL~~~---~atVtichs~T 191 (284)
T PRK14170 155 IEGKRAVVIGRSNIVGKPVAQLLLNE---NATVTIAHSRT 191 (284)
T ss_pred CCCCEEEEECCCCcchHHHHHHHHHC---CCEEEEeCCCC
Confidence 57999999999999999999999887 68888775433
No 479
>PLN02545 3-hydroxybutyryl-CoA dehydrogenase
Probab=91.78 E-value=0.3 Score=34.38 Aligned_cols=34 Identities=15% Similarity=0.202 Sum_probs=29.2
Q ss_pred ceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCC
Q psy897 14 GVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERK 51 (125)
Q Consensus 14 ~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~ 51 (125)
++|.|.| .|.+|..|+..|+.. |++|+++++++.
T Consensus 5 ~~V~vIG-~G~mG~~iA~~l~~~---G~~V~~~d~~~~ 38 (295)
T PLN02545 5 KKVGVVG-AGQMGSGIAQLAAAA---GMDVWLLDSDPA 38 (295)
T ss_pred CEEEEEC-CCHHHHHHHHHHHhc---CCeEEEEeCCHH
Confidence 5788886 599999999999988 799999998655
No 480
>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=91.76 E-value=0.19 Score=36.85 Aligned_cols=23 Identities=22% Similarity=0.469 Sum_probs=20.3
Q ss_pred ceEEEecCccchhHHHHHHHHHh
Q psy897 14 GVIFLTGGTGFMGKVLLDTLLRR 36 (125)
Q Consensus 14 ~~vlitG~~G~iG~~i~~~l~~~ 36 (125)
++|.|.||||++|+.+++.+++.
T Consensus 2 ~~VAIVGATG~vG~ell~llL~~ 24 (369)
T PRK06598 2 KKVGFVGWRGMVGSVLMQRMVEE 24 (369)
T ss_pred eEEEEEeCCCHHHHHHHHHHHhC
Confidence 57999999999999999977765
No 481
>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=91.67 E-value=0.36 Score=33.93 Aligned_cols=34 Identities=12% Similarity=0.044 Sum_probs=29.4
Q ss_pred ceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCC
Q psy897 14 GVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERK 51 (125)
Q Consensus 14 ~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~ 51 (125)
++|.|.|+ |.+|..++..|+.. +++|.+.++++.
T Consensus 5 ~kI~vIGa-G~mG~~iA~~la~~---G~~V~l~d~~~~ 38 (292)
T PRK07530 5 KKVGVIGA-GQMGNGIAHVCALA---GYDVLLNDVSAD 38 (292)
T ss_pred CEEEEECC-cHHHHHHHHHHHHC---CCeEEEEeCCHH
Confidence 57888865 99999999999988 799999998655
No 482
>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=91.64 E-value=1.1 Score=31.74 Aligned_cols=37 Identities=11% Similarity=0.202 Sum_probs=32.0
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCC
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRER 50 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~ 50 (125)
+.||++.|.|.+..+|+-++.-|+++ +..|.++....
T Consensus 155 l~Gk~vvVvGrS~iVGkPla~lL~~~---~atVt~chs~T 191 (282)
T PRK14166 155 LEGKDAVIIGASNIVGRPMATMLLNA---GATVSVCHIKT 191 (282)
T ss_pred CCCCEEEEECCCCcchHHHHHHHHHC---CCEEEEeCCCC
Confidence 57999999999999999999999887 68888776543
No 483
>KOG1202|consensus
Probab=91.61 E-value=0.21 Score=42.06 Aligned_cols=110 Identities=17% Similarity=0.231 Sum_probs=66.9
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCcc-EEEEEecCCCCCCHHH-HHHHhhhccCChh---hhhhhhc--------
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIH-SIYILVRERKGVSPQE-RIEKMLDNEGPIF---KDFANLV-------- 77 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~-~v~~~~r~~~~~~~~~-~~~~~~~~~~~~~---~~l~~~~-------- 77 (125)
...|.++|+||-|+.|-.+++.|..+ |. .++..+|+.-+...+. .++.|..+...+. .++....
T Consensus 1766 hpeksYii~GGLGGFGLELaqWLi~R---Gar~lVLtSRsGirtGYQa~~vrrWr~~GVqV~vsT~nitt~~ga~~Li~~ 1842 (2376)
T KOG1202|consen 1766 HPEKSYIIVGGLGGFGLELAQWLIQR---GARKLVLTSRSGIRTGYQALMVRRWRRRGVQVQVSTSNITTAEGARGLIEE 1842 (2376)
T ss_pred CccceEEEeccccchhHHHHHHHHhc---CceEEEEeccccchhhHHHHHHHHHHhcCeEEEEecccchhhhhHHHHHHH
Confidence 45789999999999999999999999 55 4555567655444444 3455654311111 1222111
Q ss_pred --CccCCCeEEEeccccCcc-------hhHHHHhHhhHHHHHHHHHHHhh-CCCCc
Q psy897 78 --RLKTQRIRFIFLATLRFD-------EELKIAIRTNICATQTVVKLAKQ-CPHLR 123 (125)
Q Consensus 78 --~l~~~~~Vih~a~~~~~~-------~~~~~~~~~Nv~g~~~l~~~~~~-~~~~~ 123 (125)
.+.....|+|+|+..+.. ++++.+-+.-+.||.+|=+..++ ++.|+
T Consensus 1843 s~kl~~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~Ld 1898 (2376)
T KOG1202|consen 1843 SNKLGPVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPELD 1898 (2376)
T ss_pred hhhcccccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCcccc
Confidence 111345899999986321 34455556677888888766654 44443
No 484
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=91.60 E-value=0.57 Score=33.17 Aligned_cols=37 Identities=16% Similarity=0.266 Sum_probs=30.3
Q ss_pred CCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCC
Q psy897 12 KDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERK 51 (125)
Q Consensus 12 ~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~ 51 (125)
++++++|.|+ |+.+++++..|++. +..+|+++.|..+
T Consensus 125 ~~~~vlilGA-GGAarAv~~aL~~~--g~~~i~V~NRt~~ 161 (283)
T COG0169 125 TGKRVLILGA-GGAARAVAFALAEA--GAKRITVVNRTRE 161 (283)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHc--CCCEEEEEeCCHH
Confidence 4688999975 66899999999998 2378999999765
No 485
>PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=91.60 E-value=0.32 Score=34.03 Aligned_cols=34 Identities=15% Similarity=0.087 Sum_probs=28.9
Q ss_pred ceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCC
Q psy897 14 GVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERK 51 (125)
Q Consensus 14 ~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~ 51 (125)
++|.|.|+ |.+|..++..++.. +++|.++++++.
T Consensus 4 ~kI~VIG~-G~mG~~ia~~la~~---g~~V~~~d~~~~ 37 (282)
T PRK05808 4 QKIGVIGA-GTMGNGIAQVCAVA---GYDVVMVDISDA 37 (282)
T ss_pred cEEEEEcc-CHHHHHHHHHHHHC---CCceEEEeCCHH
Confidence 56888865 99999999999988 789999987655
No 486
>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain. The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.
Probab=91.58 E-value=0.36 Score=29.30 Aligned_cols=33 Identities=27% Similarity=0.508 Sum_probs=25.7
Q ss_pred eEEEecCccchhHHHHHHHHHhCCCccEEEEE-ecC
Q psy897 15 VIFLTGGTGFMGKVLLDTLLRRFPSIHSIYIL-VRE 49 (125)
Q Consensus 15 ~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~-~r~ 49 (125)
++.|+|++|.+|+.+++.|... + +.++..+ +++
T Consensus 1 ki~iiG~~g~~g~~~~~~l~~~-~-~~~l~av~~~~ 34 (122)
T smart00859 1 KVAIVGATGYVGQELLRLLAEH-P-DFEVVALAASA 34 (122)
T ss_pred CEEEECCCChHHHHHHHHHhcC-C-CceEEEEEech
Confidence 4789999999999999998885 3 3666666 443
No 487
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=91.57 E-value=0.62 Score=33.00 Aligned_cols=38 Identities=16% Similarity=0.179 Sum_probs=30.3
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCC
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERK 51 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~ 51 (125)
.++++++|.|+ |+.+++++..|... +..+|+++.|...
T Consensus 122 ~~~k~vlvlGa-GGaarAi~~~l~~~--g~~~i~i~nRt~~ 159 (288)
T PRK12749 122 IKGKTMVLLGA-GGASTAIGAQGAIE--GLKEIKLFNRRDE 159 (288)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHC--CCCEEEEEeCCcc
Confidence 45789999997 55599999999887 3468999999754
No 488
>PRK06249 2-dehydropantoate 2-reductase; Provisional
Probab=91.55 E-value=0.45 Score=33.84 Aligned_cols=34 Identities=26% Similarity=0.283 Sum_probs=29.1
Q ss_pred CceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCC
Q psy897 13 DGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRER 50 (125)
Q Consensus 13 ~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~ 50 (125)
.++|+|. |.|-||..++..|.+. +++|.++.|+.
T Consensus 5 ~m~I~Ii-G~GaiG~~lA~~L~~~---g~~V~~~~r~~ 38 (313)
T PRK06249 5 TPRIGII-GTGAIGGFYGAMLARA---GFDVHFLLRSD 38 (313)
T ss_pred CcEEEEE-CCCHHHHHHHHHHHHC---CCeEEEEEeCC
Confidence 3678888 6799999999999988 79999999864
No 489
>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=91.55 E-value=1.1 Score=31.66 Aligned_cols=35 Identities=20% Similarity=0.248 Sum_probs=30.6
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEec
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVR 48 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r 48 (125)
+.||+++|.|.+..+|+-++..|+++ +..|.++..
T Consensus 155 l~Gk~vvViGrS~~VG~Pla~lL~~~---~AtVti~hs 189 (281)
T PRK14183 155 VKGKDVCVVGASNIVGKPMAALLLNA---NATVDICHI 189 (281)
T ss_pred CCCCEEEEECCCCcchHHHHHHHHHC---CCEEEEeCC
Confidence 57999999999999999999999988 688887643
No 490
>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et
Probab=91.50 E-value=0.49 Score=32.64 Aligned_cols=37 Identities=11% Similarity=0.153 Sum_probs=30.2
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCC
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRER 50 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~ 50 (125)
.++++++|.|++|.+|..+++.+... +.++++.+++.
T Consensus 143 ~~~~~vlv~g~~g~~g~~~~~~a~~~---g~~v~~~~~~~ 179 (309)
T cd05289 143 KAGQTVLIHGAAGGVGSFAVQLAKAR---GARVIATASAA 179 (309)
T ss_pred CCCCEEEEecCCchHHHHHHHHHHHc---CCEEEEEecch
Confidence 45789999999999999998877776 68888877543
No 491
>PLN03139 formate dehydrogenase; Provisional
Probab=91.49 E-value=0.39 Score=35.48 Aligned_cols=37 Identities=19% Similarity=0.197 Sum_probs=31.9
Q ss_pred ccCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCC
Q psy897 10 FYKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRER 50 (125)
Q Consensus 10 ~~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~ 50 (125)
.+.+|++.|.| .|-||+.+++.|... +.+|++.++..
T Consensus 196 ~L~gktVGIVG-~G~IG~~vA~~L~af---G~~V~~~d~~~ 232 (386)
T PLN03139 196 DLEGKTVGTVG-AGRIGRLLLQRLKPF---NCNLLYHDRLK 232 (386)
T ss_pred CCCCCEEEEEe-ecHHHHHHHHHHHHC---CCEEEEECCCC
Confidence 36789999998 799999999999887 78999988764
No 492
>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2. UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.
Probab=91.45 E-value=0.36 Score=34.59 Aligned_cols=34 Identities=24% Similarity=0.341 Sum_probs=27.1
Q ss_pred eEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCC
Q psy897 15 VIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERK 51 (125)
Q Consensus 15 ~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~ 51 (125)
+|+|.|+ |++|.++++.|... +..++.++|.+.-
T Consensus 1 kVlIVGa-GGlG~EiaKnLal~--Gvg~ItIvD~D~V 34 (312)
T cd01489 1 KVLVVGA-GGIGCELLKNLVLT--GFGEIHIIDLDTI 34 (312)
T ss_pred CEEEECC-CHHHHHHHHHHHHh--cCCeEEEEcCCCc
Confidence 4788875 89999999999988 4578888876533
No 493
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=91.45 E-value=0.44 Score=33.39 Aligned_cols=36 Identities=14% Similarity=0.164 Sum_probs=29.9
Q ss_pred CCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCC
Q psy897 12 KDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRER 50 (125)
Q Consensus 12 ~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~ 50 (125)
.+.+++|+|++|.+|..+++.+... |.+|+++++.+
T Consensus 142 ~~~~vlI~g~~~~~g~~~~~la~~~---g~~v~~~~~~~ 177 (324)
T cd08244 142 PGDVVLVTAAAGGLGSLLVQLAKAA---GATVVGAAGGP 177 (324)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHC---CCEEEEEeCCH
Confidence 4678999999999999988877777 68888887644
No 494
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=91.45 E-value=0.38 Score=34.63 Aligned_cols=34 Identities=12% Similarity=0.088 Sum_probs=29.6
Q ss_pred ceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCC
Q psy897 14 GVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERK 51 (125)
Q Consensus 14 ~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~ 51 (125)
++|.|.| +|-||+.++..++.. |++|++.++++.
T Consensus 8 ~~VaVIG-aG~MG~giA~~~a~a---G~~V~l~D~~~~ 41 (321)
T PRK07066 8 KTFAAIG-SGVIGSGWVARALAH---GLDVVAWDPAPG 41 (321)
T ss_pred CEEEEEC-cCHHHHHHHHHHHhC---CCeEEEEeCCHH
Confidence 6788886 599999999999988 899999998654
No 495
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=91.44 E-value=0.29 Score=35.89 Aligned_cols=37 Identities=16% Similarity=0.205 Sum_probs=30.2
Q ss_pred ccCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecC
Q psy897 10 FYKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRE 49 (125)
Q Consensus 10 ~~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~ 49 (125)
.+++++|+|.| .|.+|++++..|... +..++.+++++
T Consensus 132 ~l~~~~VlvvG-~GG~Gs~ia~~La~~--Gvg~i~lvD~d 168 (376)
T PRK08762 132 RLLEARVLLIG-AGGLGSPAALYLAAA--GVGTLGIVDHD 168 (376)
T ss_pred HHhcCcEEEEC-CCHHHHHHHHHHHHc--CCCeEEEEeCC
Confidence 46678899995 478999999999998 44688888875
No 496
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=91.40 E-value=0.56 Score=31.49 Aligned_cols=36 Identities=17% Similarity=0.275 Sum_probs=29.5
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCC
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRER 50 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~ 50 (125)
+++++++|.|| |-+|..-++.|++. |.+|.+++...
T Consensus 7 l~gk~vlVvGg-G~va~rk~~~Ll~~---ga~VtVvsp~~ 42 (205)
T TIGR01470 7 LEGRAVLVVGG-GDVALRKARLLLKA---GAQLRVIAEEL 42 (205)
T ss_pred cCCCeEEEECc-CHHHHHHHHHHHHC---CCEEEEEcCCC
Confidence 56899999975 67888888999998 78999887643
No 497
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=91.35 E-value=0.48 Score=32.83 Aligned_cols=37 Identities=8% Similarity=0.069 Sum_probs=30.8
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCC
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRER 50 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~ 50 (125)
.++.+++|+|++|.+|..+++.+... |..|+.++++.
T Consensus 138 ~~~~~vli~g~~~~~g~~~~~~a~~~---g~~v~~~~~~~ 174 (323)
T cd08241 138 QPGETVLVLGAAGGVGLAAVQLAKAL---GARVIAAASSE 174 (323)
T ss_pred CCCCEEEEEcCCchHHHHHHHHHHHh---CCEEEEEeCCH
Confidence 35789999999999999998888777 68888877654
No 498
>PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=91.30 E-value=1.2 Score=31.56 Aligned_cols=36 Identities=22% Similarity=0.303 Sum_probs=31.2
Q ss_pred cCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecC
Q psy897 11 YKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRE 49 (125)
Q Consensus 11 ~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~ 49 (125)
+.||++.|.|.+..+|+-++.-|+++ +..|.++...
T Consensus 157 l~GK~vvViGrS~iVGkPla~lL~~~---~ATVtichs~ 192 (288)
T PRK14171 157 LTGKNVVIIGRSNIVGKPLSALLLKE---NCSVTICHSK 192 (288)
T ss_pred CCCCEEEEECCCCcchHHHHHHHHHC---CCEEEEeCCC
Confidence 56999999999999999999999887 6888876543
No 499
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=91.30 E-value=0.43 Score=32.85 Aligned_cols=40 Identities=15% Similarity=0.216 Sum_probs=31.0
Q ss_pred cccCCceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCCC
Q psy897 9 DFYKDGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRERK 51 (125)
Q Consensus 9 ~~~~~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~~ 51 (125)
..+++.+|+|.| .|.+|+.+++.|... +..++.++|.+..
T Consensus 20 ~~L~~~~VlvvG-~GglGs~va~~La~~--Gvg~i~lvD~D~v 59 (240)
T TIGR02355 20 EALKASRVLIVG-LGGLGCAASQYLAAA--GVGNLTLLDFDTV 59 (240)
T ss_pred HHHhCCcEEEEC-cCHHHHHHHHHHHHc--CCCEEEEEeCCcc
Confidence 346677888885 567999999999998 4578888877543
No 500
>PLN02696 1-deoxy-D-xylulose-5-phosphate reductoisomerase
Probab=91.25 E-value=0.6 Score=35.14 Aligned_cols=37 Identities=27% Similarity=0.354 Sum_probs=29.4
Q ss_pred CceEEEecCccchhHHHHHHHHHhCCCccEEEEEecCC
Q psy897 13 DGVIFLTGGTGFMGKVLLDTLLRRFPSIHSIYILVRER 50 (125)
Q Consensus 13 ~~~vlitG~~G~iG~~i~~~l~~~~~~~~~v~~~~r~~ 50 (125)
.|+|.|.|+||-||+..++-+.+. |+.++|.++.-..
T Consensus 57 ~KkI~ILGSTGSIGtqtLdVI~~~-pd~f~vvaLaag~ 93 (454)
T PLN02696 57 PKPISLLGSTGSIGTQTLDIVAEN-PDKFKVVALAAGS 93 (454)
T ss_pred ccEEEEecCCcHhhHHHHHHHHhC-ccccEEEEEECCC
Confidence 489999999999999987776664 5668888876543
Done!