Query psy8974
Match_columns 79
No_of_seqs 163 out of 1018
Neff 5.2
Searched_HMMs 29240
Date Sat Aug 17 00:28:42 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8974.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/8974hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3k35_A NAD-dependent deacetyla 100.0 6E-31 2.1E-35 197.7 7.0 76 2-77 2-78 (318)
2 3pki_A NAD-dependent deacetyla 100.0 1.9E-30 6.4E-35 197.7 7.1 76 2-77 2-78 (355)
3 3u31_A SIR2A, transcriptional 99.7 8.3E-18 2.8E-22 124.4 0.6 59 17-75 17-78 (290)
4 1ma3_A SIR2-AF2, transcription 99.6 3.8E-17 1.3E-21 117.8 2.9 45 30-74 1-46 (253)
5 3riy_A NAD-dependent deacetyla 99.6 1.6E-16 5.4E-21 116.0 3.8 42 33-74 10-52 (273)
6 1q14_A HST2 protein; histone d 99.6 1.9E-16 6.5E-21 120.1 3.7 55 19-73 1-59 (361)
7 1q1a_A HST2 protein; ternary c 99.6 5E-16 1.7E-20 113.7 4.6 45 29-73 3-51 (289)
8 1yc5_A NAD-dependent deacetyla 99.6 2.1E-16 7.3E-21 113.3 2.3 41 34-74 3-44 (246)
9 2hjh_A NAD-dependent histone d 99.6 6.5E-16 2.2E-20 116.3 4.2 41 33-73 35-76 (354)
10 1m2k_A Silent information regu 99.6 6.9E-16 2.4E-20 111.0 3.6 40 35-74 3-43 (249)
11 3glr_A NAD-dependent deacetyla 99.5 1.9E-15 6.5E-20 111.7 3.8 41 33-73 10-54 (285)
12 4iao_A NAD-dependent histone d 99.5 3.8E-15 1.3E-19 117.4 3.8 40 34-73 174-214 (492)
13 1j8f_A SIRT2, sirtuin 2, isofo 99.5 8.7E-15 3E-19 109.3 3.9 41 33-73 30-74 (323)
14 1s5p_A NAD-dependent deacetyla 99.4 3.2E-14 1.1E-18 101.6 0.9 31 44-74 1-32 (235)
15 3cf4_G Acetyl-COA decarboxylas 83.0 1.1 3.7E-05 29.4 3.3 23 34-56 24-46 (170)
16 1e2b_A Enzyme IIB-cellobiose; 80.1 0.54 1.9E-05 29.2 0.9 14 45-58 4-17 (106)
17 1tvm_A PTS system, galactitol- 69.3 1.3 4.3E-05 27.6 0.5 14 45-58 22-35 (113)
18 3eya_A Pyruvate dehydrogenase 64.8 5.5 0.00019 30.3 3.4 26 31-56 188-213 (549)
19 2l2q_A PTS system, cellobiose- 64.8 3.1 0.00011 25.5 1.7 13 46-58 6-18 (109)
20 2vbi_A Pyruvate decarboxylase; 62.9 9.7 0.00033 29.0 4.5 28 29-56 194-221 (566)
21 2wvg_A PDC, pyruvate decarboxy 62.3 9.1 0.00031 29.1 4.2 28 29-56 194-221 (568)
22 3fxa_A SIS domain protein; str 60.5 5.9 0.0002 25.8 2.6 25 32-56 32-56 (201)
23 1vkr_A Mannitol-specific PTS s 60.5 1.9 6.6E-05 27.5 0.1 15 44-58 13-27 (125)
24 1ybh_A Acetolactate synthase, 59.8 8.5 0.00029 29.5 3.7 25 32-56 202-226 (590)
25 4feg_A Pyruvate oxidase; carba 57.7 8.4 0.00029 29.7 3.3 25 32-56 200-224 (603)
26 3nbm_A PTS system, lactose-spe 57.0 2.6 9E-05 26.4 0.3 15 44-58 6-20 (108)
27 3rgo_A Protein-tyrosine phosph 56.5 23 0.00078 21.6 4.7 31 28-58 73-103 (157)
28 1ozh_A ALS, acetolactate synth 56.0 9.4 0.00032 29.2 3.3 25 32-56 195-219 (566)
29 1ovm_A Indole-3-pyruvate decar 55.9 7.8 0.00027 29.3 2.9 29 28-56 193-221 (552)
30 2yva_A DNAA initiator-associat 55.3 9.9 0.00034 24.4 3.0 27 29-56 26-52 (196)
31 2q28_A Oxalyl-COA decarboxylas 53.5 6.9 0.00024 29.7 2.2 25 32-56 199-223 (564)
32 2vk8_A Pyruvate decarboxylase 53.4 9.5 0.00032 28.9 3.0 27 30-56 197-223 (563)
33 2bp3_S Platelet glycoprotein I 53.2 2.9 9.9E-05 20.5 0.0 14 60-73 4-18 (26)
34 1x92_A APC5045, phosphoheptose 53.0 13 0.00046 23.9 3.3 27 29-56 30-56 (199)
35 2nxw_A Phenyl-3-pyruvate decar 52.1 10 0.00035 29.0 3.0 29 28-56 206-234 (565)
36 1ytl_A Acetyl-COA decarboxylas 52.1 9 0.00031 25.7 2.4 22 34-56 24-46 (174)
37 3czc_A RMPB; alpha/beta sandwi 52.1 2.3 7.8E-05 26.2 -0.6 14 45-58 19-32 (110)
38 1v5e_A Pyruvate oxidase; oxido 52.0 12 0.00041 28.8 3.3 24 32-55 193-216 (590)
39 3sho_A Transcriptional regulat 51.7 15 0.00051 23.3 3.4 25 32-57 27-51 (187)
40 3cvj_A Putative phosphoheptose 51.4 18 0.00063 24.2 3.9 25 32-57 30-54 (243)
41 2c31_A Oxalyl-COA decarboxylas 51.1 7.6 0.00026 29.6 2.1 25 32-56 201-225 (568)
42 1t9b_A Acetolactate synthase, 51.0 13 0.00043 29.5 3.4 26 31-56 276-301 (677)
43 2img_A Dual specificity protei 50.3 34 0.0012 20.5 4.7 29 29-57 74-102 (151)
44 2vkc_A NEDD4-binding protein 2 50.1 17 0.0006 23.1 3.5 22 45-66 88-109 (135)
45 3emu_A Leucine rich repeat and 49.8 9.3 0.00032 24.4 2.1 30 31-60 70-103 (161)
46 2iht_A Carboxyethylarginine sy 48.5 9.2 0.00031 29.2 2.2 26 31-56 203-228 (573)
47 2uz1_A Benzaldehyde lyase; thi 48.4 9.2 0.00032 29.1 2.2 25 32-56 192-216 (563)
48 2d9i_A NEDD4-binding protein 2 48.2 12 0.00042 22.3 2.4 22 45-66 43-64 (96)
49 2x7j_A 2-succinyl-5-enolpyruvy 48.2 10 0.00034 29.2 2.4 25 32-56 231-255 (604)
50 3brc_A Conserved protein of un 47.7 17 0.00057 24.8 3.1 23 31-53 23-45 (156)
51 3fau_A NEDD4-binding protein 2 47.5 8.5 0.00029 22.3 1.5 24 44-67 34-57 (82)
52 2xhz_A KDSD, YRBH, arabinose 5 47.4 7.3 0.00025 24.7 1.3 25 33-57 37-61 (183)
53 1tk9_A Phosphoheptose isomeras 47.2 17 0.00059 22.9 3.1 27 30-57 28-54 (188)
54 4erc_A Dual specificity protei 47.2 30 0.001 20.9 4.1 30 28-57 72-101 (150)
55 1twd_A Copper homeostasis prot 46.6 13 0.00043 27.0 2.5 24 34-57 158-181 (256)
56 2vbf_A Branched-chain alpha-ke 46.4 10 0.00035 28.8 2.2 26 31-56 215-240 (570)
57 2pan_A Glyoxylate carboligase; 45.7 10 0.00035 29.2 2.1 26 31-56 213-238 (616)
58 3ot6_A Enoyl-COA hydratase/iso 45.2 24 0.00081 24.0 3.7 33 28-60 31-63 (232)
59 1nri_A Hypothetical protein HI 45.2 13 0.00046 26.3 2.5 25 32-57 59-83 (306)
60 2pgn_A Cyclohexane-1,2-dione h 44.3 11 0.00037 29.0 2.0 25 32-56 193-217 (589)
61 1q6z_A BFD, BFDC, benzoylforma 44.2 10 0.00035 28.5 1.9 24 32-55 188-211 (528)
62 3lq1_A 2-succinyl-5-enolpyruvy 44.0 18 0.00061 27.7 3.2 26 31-57 211-236 (578)
63 3s4e_A Dual specificity protei 44.0 53 0.0018 20.0 5.2 30 30-59 67-96 (144)
64 2xbl_A Phosphoheptose isomeras 44.0 25 0.00084 22.4 3.5 23 34-57 38-60 (198)
65 2j16_A SDP-1, tyrosine-protein 43.5 18 0.00061 24.0 2.8 29 31-59 104-132 (182)
66 3ezz_A Dual specificity protei 41.4 57 0.002 19.7 5.0 30 29-58 66-95 (144)
67 1m3s_A Hypothetical protein YC 41.1 14 0.00047 23.5 1.9 24 32-56 25-48 (186)
68 2i2w_A Phosphoheptose isomeras 40.9 25 0.00086 23.1 3.2 17 41-58 61-77 (212)
69 3nwy_A Uridylate kinase; allos 40.6 36 0.0012 24.3 4.2 28 27-54 71-98 (281)
70 1rxd_A Protein tyrosine phosph 39.5 62 0.0021 19.5 4.9 31 27-57 77-109 (159)
71 3r9t_A ECHA1_1; ssgcid, seattl 39.5 37 0.0013 23.5 4.0 33 28-60 35-70 (267)
72 3ek6_A Uridylate kinase; UMPK 38.0 45 0.0015 22.9 4.3 28 27-54 31-58 (243)
73 1jeo_A MJ1247, hypothetical pr 37.5 16 0.00054 23.1 1.7 24 32-56 28-51 (180)
74 4fzw_C 1,2-epoxyphenylacetyl-C 37.1 67 0.0023 22.3 5.1 33 28-60 41-75 (274)
75 3f81_A Dual specificity protei 37.0 78 0.0027 19.9 5.1 30 29-58 99-129 (183)
76 3i47_A Enoyl COA hydratase/iso 36.4 58 0.002 22.6 4.7 33 29-61 31-65 (268)
77 2bdq_A Copper homeostasis prot 36.1 25 0.00087 24.9 2.7 25 34-58 165-190 (224)
78 1vim_A Hypothetical protein AF 35.8 19 0.00064 23.6 1.9 24 32-56 35-58 (200)
79 2ywx_A Phosphoribosylaminoimid 35.6 22 0.00076 24.0 2.3 24 34-57 40-63 (157)
80 1zzw_A Dual specificity protei 35.4 75 0.0026 19.2 5.7 28 31-58 70-97 (149)
81 2esb_A Dual specificity protei 35.3 56 0.0019 21.1 4.2 30 30-59 83-112 (188)
82 3s4o_A Protein tyrosine phosph 35.0 76 0.0026 19.2 4.9 15 44-58 109-123 (167)
83 2hcm_A Dual specificity protei 34.9 61 0.0021 20.1 4.2 29 31-59 76-104 (164)
84 4a7w_A Uridylate kinase; trans 34.3 55 0.0019 22.4 4.2 28 27-54 29-56 (240)
85 3hrx_A Probable enoyl-COA hydr 34.3 68 0.0023 21.8 4.7 33 28-60 26-60 (254)
86 3cm3_A Late protein H1, dual s 34.1 88 0.003 19.7 5.7 29 30-58 94-122 (176)
87 2a1f_A Uridylate kinase; PYRH, 34.1 45 0.0015 22.6 3.7 29 27-55 30-58 (247)
88 3t89_A 1,4-dihydroxy-2-naphtho 34.0 50 0.0017 23.3 4.0 32 29-60 55-89 (289)
89 3gkb_A Putative enoyl-COA hydr 33.9 48 0.0016 23.4 3.9 37 29-65 35-76 (287)
90 2hxp_A Dual specificity protei 33.6 58 0.002 20.2 4.0 22 38-59 79-100 (155)
91 2r0b_A Serine/threonine/tyrosi 33.4 82 0.0028 19.1 5.2 28 31-58 77-104 (154)
92 3lao_A Enoyl-COA hydratase/iso 33.3 74 0.0025 21.8 4.8 32 29-60 39-72 (258)
93 1wrm_A Dual specificity phosph 33.3 75 0.0026 19.8 4.5 29 31-59 70-98 (165)
94 1z9d_A Uridylate kinase, UK, U 33.2 46 0.0016 22.7 3.7 28 27-54 29-56 (252)
95 3hp0_A Putative polyketide bio 33.1 76 0.0026 22.0 4.9 31 30-60 35-66 (267)
96 3gow_A PAAG, probable enoyl-CO 32.9 74 0.0025 21.7 4.7 32 29-60 27-60 (254)
97 2a3n_A Putative glucosamine-fr 32.5 38 0.0013 24.3 3.2 26 32-58 40-67 (355)
98 3t8b_A 1,4-dihydroxy-2-naphtho 32.4 52 0.0018 23.9 4.0 27 29-55 84-112 (334)
99 3fdu_A Putative enoyl-COA hydr 32.1 78 0.0027 21.8 4.8 32 29-60 32-65 (266)
100 3bpt_A 3-hydroxyisobutyryl-COA 31.9 53 0.0018 23.9 4.0 26 29-54 33-60 (363)
101 1ns5_A Hypothetical protein YB 31.8 41 0.0014 22.2 3.1 13 4-16 22-34 (155)
102 1fpz_A Cyclin-dependent kinase 31.7 94 0.0032 20.2 4.9 29 29-57 118-146 (212)
103 3swx_A Probable enoyl-COA hydr 31.5 80 0.0027 21.7 4.7 33 28-60 35-69 (265)
104 1ybd_A Uridylate kinase; alpha 31.3 52 0.0018 22.0 3.7 28 27-54 29-56 (239)
105 2j5g_A ALR4455 protein; enzyme 30.8 64 0.0022 22.4 4.1 27 29-55 51-79 (263)
106 3t3w_A Enoyl-COA hydratase; ss 30.2 86 0.0029 21.8 4.7 33 29-61 47-81 (279)
107 1yz4_A DUSP15, dual specificit 30.1 99 0.0034 19.0 5.1 29 31-59 71-99 (160)
108 3pea_A Enoyl-COA hydratase/iso 29.8 88 0.003 21.4 4.7 33 28-60 31-65 (261)
109 2g6z_A Dual specificity protei 29.5 87 0.003 21.1 4.5 31 29-59 68-98 (211)
110 3qxi_A Enoyl-COA hydratase ECH 29.5 88 0.003 21.5 4.7 32 29-60 42-75 (265)
111 3q4g_A NH(3)-dependent NAD(+) 29.1 32 0.0011 24.6 2.3 32 18-49 12-45 (279)
112 3u61_B DNA polymerase accessor 29.0 43 0.0015 22.9 2.9 25 32-56 33-60 (324)
113 3myb_A Enoyl-COA hydratase; ss 28.8 88 0.003 21.9 4.6 32 29-60 53-86 (286)
114 2oud_A Dual specificity protei 28.7 1.1E+02 0.0039 19.3 5.7 29 31-59 74-102 (177)
115 3oc7_A Enoyl-COA hydratase; se 28.7 67 0.0023 22.0 3.9 32 29-60 38-71 (267)
116 1nzy_A Dehalogenase, 4-chlorob 28.6 95 0.0033 21.3 4.7 32 29-60 30-63 (269)
117 3rsi_A Putative enoyl-COA hydr 28.3 80 0.0027 21.7 4.3 32 29-60 36-69 (265)
118 2jjx_A Uridylate kinase, UMP k 28.3 64 0.0022 22.0 3.7 29 27-55 34-62 (255)
119 3lke_A Enoyl-COA hydratase; ny 28.2 74 0.0025 21.9 4.1 32 29-60 31-65 (263)
120 2fbm_A Y chromosome chromodoma 28.2 1E+02 0.0034 21.7 4.8 32 29-60 51-83 (291)
121 2ej5_A Enoyl-COA hydratase sub 28.0 1E+02 0.0035 20.9 4.8 32 29-60 30-63 (257)
122 2nt2_A Protein phosphatase sli 27.7 1E+02 0.0036 18.5 5.4 29 31-59 68-96 (145)
123 3l3s_A Enoyl-COA hydratase/iso 27.7 79 0.0027 21.7 4.1 33 28-60 32-66 (263)
124 3g64_A Putative enoyl-COA hydr 27.6 1E+02 0.0035 21.3 4.7 32 29-60 44-77 (279)
125 1dci_A Dienoyl-COA isomerase; 27.5 97 0.0033 21.2 4.6 32 29-60 31-64 (275)
126 3njd_A Enoyl-COA hydratase; ss 27.4 92 0.0031 22.3 4.6 32 29-60 62-95 (333)
127 3qk8_A Enoyl-COA hydratase ECH 27.4 84 0.0029 21.7 4.3 17 44-60 57-73 (272)
128 3ju1_A Enoyl-COA hydratase/iso 27.2 66 0.0022 24.0 3.9 32 29-60 69-103 (407)
129 3hh1_A Tetrapyrrole methylase 27.1 79 0.0027 19.0 3.7 31 32-68 67-97 (117)
130 2ij9_A Uridylate kinase; struc 27.0 61 0.0021 21.3 3.4 27 27-54 16-42 (219)
131 1hzd_A AUH, AU-binding protein 27.0 61 0.0021 22.4 3.4 25 30-54 40-66 (272)
132 3qre_A Enoyl-COA hydratase, EC 26.9 85 0.0029 22.1 4.3 32 29-60 57-90 (298)
133 2zqe_A MUTS2 protein; alpha/be 26.5 72 0.0025 18.6 3.3 26 30-55 14-44 (83)
134 2j4j_A Uridylate kinase; trans 26.4 72 0.0025 21.1 3.7 27 28-54 18-44 (226)
135 1uiy_A Enoyl-COA hydratase; ly 26.2 1.2E+02 0.0042 20.4 4.9 33 29-61 26-60 (253)
136 1pjh_A Enoyl-COA isomerase; EC 26.2 1.1E+02 0.0039 21.1 4.8 32 29-60 36-69 (280)
137 3r9q_A Enoyl-COA hydratase/iso 26.0 1.1E+02 0.0039 21.0 4.7 32 29-60 38-71 (262)
138 3p5m_A Enoyl-COA hydratase/iso 25.7 95 0.0032 21.2 4.2 32 29-60 33-66 (255)
139 3trr_A Probable enoyl-COA hydr 25.6 94 0.0032 21.3 4.2 32 29-60 34-67 (256)
140 3d40_A FOMA protein; fosfomyci 25.5 1E+02 0.0036 21.5 4.5 28 29-56 48-76 (286)
141 3utn_X Thiosulfate sulfurtrans 25.5 30 0.001 25.1 1.7 30 43-72 274-312 (327)
142 3pe8_A Enoyl-COA hydratase; em 25.4 1.2E+02 0.004 20.8 4.7 32 29-60 36-69 (256)
143 2uzf_A Naphthoate synthase; ly 25.3 90 0.0031 21.5 4.1 27 29-55 40-68 (273)
144 3sll_A Probable enoyl-COA hydr 25.3 1.1E+02 0.0038 21.4 4.6 32 29-60 51-84 (290)
145 4di1_A Enoyl-COA hydratase ECH 25.3 1.3E+02 0.0044 21.0 5.0 32 29-60 50-83 (277)
146 3qxz_A Enoyl-COA hydratase/iso 25.1 84 0.0029 21.6 3.9 32 29-60 34-67 (265)
147 3rrv_A Enoyl-COA hydratase/iso 25.1 1.2E+02 0.004 21.1 4.7 32 29-60 55-88 (276)
148 3tha_A Tryptophan synthase alp 25.1 66 0.0023 22.8 3.4 28 31-58 184-211 (252)
149 4hdt_A 3-hydroxyisobutyryl-COA 24.9 1.1E+02 0.0036 22.3 4.6 33 28-60 35-70 (353)
150 2e0t_A Dual specificity phosph 24.8 1.2E+02 0.0041 18.3 5.3 28 31-58 71-99 (151)
151 3qmj_A Enoyl-COA hydratase, EC 24.7 87 0.003 21.3 3.9 32 29-60 33-66 (256)
152 3eol_A Isocitrate lyase; seatt 24.7 63 0.0022 25.0 3.4 19 47-65 84-107 (433)
153 1szo_A 6-oxocamphor hydrolase; 24.4 1E+02 0.0035 21.1 4.2 32 29-60 43-76 (257)
154 2wgp_A Dual specificity protei 24.3 1.5E+02 0.005 19.1 5.2 28 31-58 90-117 (190)
155 3tlf_A Enoyl-COA hydratase/iso 24.2 89 0.0031 21.5 3.9 32 29-60 38-71 (274)
156 3r6h_A Enoyl-COA hydratase, EC 24.1 1.2E+02 0.0041 20.3 4.5 18 43-60 46-63 (233)
157 2j5i_A P-hydroxycinnamoyl COA 24.1 1.1E+02 0.0038 21.1 4.4 32 29-60 36-69 (276)
158 3fkj_A Putative phosphosugar i 23.9 38 0.0013 24.4 2.0 36 23-59 16-54 (347)
159 2va1_A Uridylate kinase; UMPK, 23.7 79 0.0027 21.6 3.5 26 28-54 47-72 (256)
160 3nme_A Ptpkis1 protein, SEX4 g 23.6 43 0.0015 23.7 2.2 29 31-59 92-121 (294)
161 3isa_A Putative enoyl-COA hydr 23.6 1.4E+02 0.0048 20.3 4.8 23 43-65 49-73 (254)
162 2buf_A Acetylglutamate kinase; 23.4 1.1E+02 0.0036 21.5 4.2 29 27-55 41-69 (300)
163 2ako_A Glutamate 5-kinase; str 23.3 74 0.0025 21.5 3.3 28 27-55 21-48 (251)
164 2brx_A Uridylate kinase; UMP k 23.3 70 0.0024 21.7 3.2 27 27-54 38-64 (244)
165 2nap_A Protein (periplasmic ni 22.8 84 0.0029 24.4 3.8 25 32-56 287-311 (723)
166 2a7k_A CARB; crotonase, antibi 22.8 1.5E+02 0.0051 20.0 4.8 32 29-60 27-61 (250)
167 4f47_A Enoyl-COA hydratase ECH 22.7 1.3E+02 0.0043 20.8 4.4 32 29-60 47-80 (278)
168 1mj3_A Enoyl-COA hydratase, mi 22.7 1.1E+02 0.0038 20.8 4.1 32 29-60 34-67 (260)
169 2gtr_A CDY-like, chromodomain 22.3 1.1E+02 0.0037 20.9 4.0 32 29-60 33-65 (261)
170 2pbp_A Enoyl-COA hydratase sub 22.1 1.1E+02 0.0038 20.8 4.0 32 29-60 32-65 (258)
171 3trj_A Phosphoheptose isomeras 22.1 41 0.0014 22.1 1.7 24 33-57 31-58 (201)
172 2y96_A Dual specificity phosph 22.0 1.6E+02 0.0055 19.6 4.8 30 30-59 124-154 (219)
173 1wz8_A Enoyl-COA hydratase; ly 21.4 1E+02 0.0036 21.0 3.8 32 29-60 37-70 (264)
174 2q35_A CURF; crotonase, lyase; 21.0 1.1E+02 0.0039 20.6 3.9 32 29-60 30-63 (243)
175 2iv2_X Formate dehydrogenase H 20.6 87 0.003 24.4 3.5 25 32-56 276-300 (715)
176 2a26_A Calcyclin-binding prote 20.4 1.2E+02 0.004 16.5 3.3 21 26-46 5-25 (50)
177 3lfh_A Manxa, phosphotransfera 20.0 1.3E+02 0.0043 19.1 3.7 28 26-53 42-70 (144)
178 2pq5_A Dual specificity protei 20.0 1.9E+02 0.0065 18.8 4.8 28 32-59 118-146 (205)
No 1
>3k35_A NAD-dependent deacetylase sirtuin-6; rossmann fold, Zn-binding domain, structural genomics, struc genomics consortium, SGC, ADP-ribosylation; HET: APR; 2.00A {Homo sapiens}
Probab=99.97 E-value=6e-31 Score=197.73 Aligned_cols=76 Identities=53% Similarity=0.922 Sum_probs=60.0
Q ss_pred chhhhccCCCCCCCCCCCCCccCCCHHHHHHHHHHHHHHHHhCCcEEEEccCCCCccCCCCCCCCcc-hhhhccccc
Q psy8974 2 SCNYAEGLSPYENKGKLGLAETFDSKEDFDKKIKVLSEWIDKAKHVVLHTGAGISTSAGIPDFSGPH-YWRRRVEEL 77 (79)
Q Consensus 2 ~~~ya~~ls~~~~kg~~g~~e~~d~~~~~~~~~~~l~~~l~~s~~ivvltGAGiSt~sGIPdfR~~~-~w~~~~~~l 77 (79)
|+|||++||||+|||+||+||++|++++++++++.|+++|+++++|||||||||||+|||||||+++ +|+..+.++
T Consensus 2 s~~ya~~l~~~~~~g~~~~~e~~d~p~~l~~~i~~l~~~i~~a~~ivvlTGAGISteSGIPdFR~~~Glw~~~~~~~ 78 (318)
T 3k35_A 2 SVNYAAGLSPYADKGKCGLPEIFDPPEELERKVWELARLVWQSSSVVFHTGAGISTASGIPDFRGPHGVWTMEERGL 78 (318)
T ss_dssp -------------CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCSCEEEEECGGGSGGGTCCCSSSTTCHHHHHTTTC
T ss_pred ccchhhhCCcccccCccCCccccCCHHHHHHHHHHHHHHHHhCCCEEEEeccccChhhCCCccccCCCcchhhhccC
Confidence 7999999999999999999999999999999999999999999999999999999999999999999 999765543
No 2
>3pki_A NAD-dependent deacetylase sirtuin-6; ADP ribose, structural genomics, structural genomics consortium, SGC, hydrolase; HET: AR6; 2.04A {Homo sapiens} PDB: 3pkj_A*
Probab=99.96 E-value=1.9e-30 Score=197.69 Aligned_cols=76 Identities=53% Similarity=0.922 Sum_probs=62.1
Q ss_pred chhhhccCCCCCCCCCCCCCccCCCHHHHHHHHHHHHHHHHhCCcEEEEccCCCCccCCCCCCCCcc-hhhhccccc
Q psy8974 2 SCNYAEGLSPYENKGKLGLAETFDSKEDFDKKIKVLSEWIDKAKHVVLHTGAGISTSAGIPDFSGPH-YWRRRVEEL 77 (79)
Q Consensus 2 ~~~ya~~ls~~~~kg~~g~~e~~d~~~~~~~~~~~l~~~l~~s~~ivvltGAGiSt~sGIPdfR~~~-~w~~~~~~l 77 (79)
|+|||++||||+|||+||+||+||++++++++++.|+++|+++++|||||||||||+|||||||+++ +|+.++.++
T Consensus 2 s~~ya~~ls~~~~kg~~g~~E~~D~p~~l~~~i~~la~~i~~a~~iVvlTGAGISteSGIPDFR~~~Glw~~~~~~~ 78 (355)
T 3pki_A 2 SVNYAAGLSPYADKGKCGLPEIFDPPEELERKVWELARLVWQSSSVVFHTGAGISTASGIPDFRGPHGVWTMEERGL 78 (355)
T ss_dssp -----------CCCCSCSCCCCCCCHHHHHHHHHHHHHHHHHCSSEEEEECGGGSGGGTCCCSSSTTCHHHHHHTTC
T ss_pred ccchhhhCCcccccCcCCCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEeccccchhhCCCccccCCCccchhhccC
Confidence 7999999999999999999999999999999999999999999999999999999999999999999 999765543
No 3
>3u31_A SIR2A, transcriptional regulatory protein SIR2 homologue; Zn-binding domain, rossmann fold domain; HET: MYK NAD; 2.20A {Plasmodium falciparum} PDB: 3u3d_A* 3jwp_A*
Probab=99.66 E-value=8.3e-18 Score=124.42 Aligned_cols=59 Identities=34% Similarity=0.581 Sum_probs=45.5
Q ss_pred CCC-CCccCCCHHHHHHHHHHHHHHHHhCCcEEEEccCCCCccCCCCCCCC-cc-hhhhccc
Q psy8974 17 KLG-LAETFDSKEDFDKKIKVLSEWIDKAKHVVLHTGAGISTSAGIPDFSG-PH-YWRRRVE 75 (79)
Q Consensus 17 ~~g-~~e~~d~~~~~~~~~~~l~~~l~~s~~ivvltGAGiSt~sGIPdfR~-~~-~w~~~~~ 75 (79)
-+| ++++++.+.+..+++++|+++|+++++|||+|||||||+|||||||+ ++ +|+.+.+
T Consensus 17 ~~~~~~~~~~~~~~~~~~i~~l~~~i~~a~~ivvlTGAGiSt~SGIPdFR~~~~Glw~~~~p 78 (290)
T 3u31_A 17 SMGNLMISFLKKDTQSITLEELAKIIKKCKHVVALTGSGTSAESNIPSFRGSSNSIWSKYDP 78 (290)
T ss_dssp ----------CCCCEEECHHHHHHHHHTCSSEEEEECGGGTGGGTCCSCTTCTTSGGGGSCH
T ss_pred cccchhhhccCcchhHHHHHHHHHHHHhCCCEEEEeCCccccccCCccccccccchhhcCCH
Confidence 345 67788888777788999999999999999999999999999999999 67 9987643
No 4
>1ma3_A SIR2-AF2, transcriptional regulatory protein, SIR2 family; enzyme-substrate complex, protein binding, transcription; HET: ALY MES; 2.00A {Archaeoglobus fulgidus} SCOP: c.31.1.5 PDB: 1s7g_A* 1yc2_A*
Probab=99.65 E-value=3.8e-17 Score=117.82 Aligned_cols=45 Identities=42% Similarity=0.804 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHhCCcEEEEccCCCCccCCCCCCCCcc-hhhhcc
Q psy8974 30 FDKKIKVLSEWIDKAKHVVLHTGAGISTSAGIPDFSGPH-YWRRRV 74 (79)
Q Consensus 30 ~~~~~~~l~~~l~~s~~ivvltGAGiSt~sGIPdfR~~~-~w~~~~ 74 (79)
|+++++.++++|+++++|||+||||||++|||||||+++ +|+.+.
T Consensus 1 m~~~i~~l~~~l~~a~~ivv~tGAGiS~~SGIPdfR~~~Glw~~~~ 46 (253)
T 1ma3_A 1 MEDEIRKAAEILAKSKHAVVFTGAGISAESGIPTFRGEDGLWRKYD 46 (253)
T ss_dssp CHHHHHHHHHHHHHCSSEEEEECGGGSCC----------CCSCSSC
T ss_pred ChHHHHHHHHHHHhCCcEEEEEchhhhHhhCCCCcCCCCcccccCC
Confidence 457789999999999999999999999999999999999 998753
No 5
>3riy_A NAD-dependent deacetylase sirtuin-5; desuccinylase, demalonylase, posttranslational modification, binding domain, rossmann fold domain; HET: SLL NAD; 1.55A {Homo sapiens} SCOP: c.31.1.5 PDB: 3rig_A* 4f4u_A* 4f56_A* 4hda_A* 2b4y_A* 2nyr_A* 4g1c_A*
Probab=99.62 E-value=1.6e-16 Score=116.04 Aligned_cols=42 Identities=38% Similarity=0.862 Sum_probs=39.0
Q ss_pred HHHHHHHHHHhCCcEEEEccCCCCccCCCCCCCCcc-hhhhcc
Q psy8974 33 KIKVLSEWIDKAKHVVLHTGAGISTSAGIPDFSGPH-YWRRRV 74 (79)
Q Consensus 33 ~~~~l~~~l~~s~~ivvltGAGiSt~sGIPdfR~~~-~w~~~~ 74 (79)
++++|+++|+++++|||+|||||||+|||||||+++ +|+.+.
T Consensus 10 ~i~~l~~~l~~a~~ivvlTGAGiSt~SGIPdFR~~~Glw~~~~ 52 (273)
T 3riy_A 10 SMADFRKFFAKAKHIVIISGAGVSAESGVPTFRGAGGYWRKWQ 52 (273)
T ss_dssp CHHHHHHHHHHCSEEEEEECGGGTGGGTCCCSSSGGGEETTEE
T ss_pred HHHHHHHHHHhCCcEEEEECcccchhhCCCccccccchhhhCC
Confidence 477899999999999999999999999999999999 998754
No 6
>1q14_A HST2 protein; histone deacetylase, hydrolase; 2.50A {Saccharomyces cerevisiae} SCOP: c.31.1.5
Probab=99.61 E-value=1.9e-16 Score=120.13 Aligned_cols=55 Identities=31% Similarity=0.560 Sum_probs=37.5
Q ss_pred CCCccCCCHHHHHHHHHHHHHHHHh--CCcEEEEccCCCCccCCCCCCCCc-c-hhhhc
Q psy8974 19 GLAETFDSKEDFDKKIKVLSEWIDK--AKHVVLHTGAGISTSAGIPDFSGP-H-YWRRR 73 (79)
Q Consensus 19 g~~e~~d~~~~~~~~~~~l~~~l~~--s~~ivvltGAGiSt~sGIPdfR~~-~-~w~~~ 73 (79)
|+++-..+...|+++++.|+++|++ +++|||+|||||||+|||||||++ + +|+..
T Consensus 1 ~~~~~~~~~~~~~~~i~~l~~~i~~~~a~~IVvlTGAGISteSGIPdFR~~~~Glw~~~ 59 (361)
T 1q14_A 1 GMASMSVSTASTEMSVRKIAAHMKSNPNAKVIFMVGAGISTSCGIPDFRSPGTGLYHNL 59 (361)
T ss_dssp CTTSCCCSSCCHHHHHHHHHHHHHTSTTCCEEEEECGGGTGGGC--------------C
T ss_pred CCCccCCCchhHHHHHHHHHHHHHhccCCcEEEEeCcccchhcCCcccccCcchhhhcc
Confidence 4555566667888899999999999 999999999999999999999999 5 99874
No 7
>1q1a_A HST2 protein; ternary complex, histone deacetylase, 2'-O-ADP ribose,, gene regulation; HET: ALY OAD; 1.50A {Saccharomyces cerevisiae} SCOP: c.31.1.5 PDB: 1szd_A* 1szc_A* 2od7_A* 2od9_A* 2qqf_A* 2qqg_A* 1q17_A* 2od2_A*
Probab=99.60 E-value=5e-16 Score=113.74 Aligned_cols=45 Identities=31% Similarity=0.625 Sum_probs=41.1
Q ss_pred HHHHHHHHHHHHHHh--CCcEEEEccCCCCccCCCCCCCCc-c-hhhhc
Q psy8974 29 DFDKKIKVLSEWIDK--AKHVVLHTGAGISTSAGIPDFSGP-H-YWRRR 73 (79)
Q Consensus 29 ~~~~~~~~l~~~l~~--s~~ivvltGAGiSt~sGIPdfR~~-~-~w~~~ 73 (79)
.|+++++.++++|++ +++|||+||||||++|||||||++ + +|+..
T Consensus 3 ~~~~~i~~l~~~i~~~~a~~ivvltGAGiSt~SGIPdfR~~~~Glw~~~ 51 (289)
T 1q1a_A 3 STEMSVRKIAAHMKSNPNAKVIFMVGAGISTSCGIPDFRSPGTGLYHNL 51 (289)
T ss_dssp CTHHHHHHHHHHHHHSTTSCEEEEECGGGGGGGTCCCSSSTTTSGGGSC
T ss_pred cHHHHHHHHHHHHHhcCCCCEEEEECCceeHhhCCCCcCCCCCcccccc
Confidence 356789999999999 999999999999999999999999 5 99864
No 8
>1yc5_A NAD-dependent deacetylase; SIR2, sirtuin, SIR2TM, SIRT1, nicotinamide, hydrolase; HET: ALY; 1.40A {Thermotoga maritima} SCOP: c.31.1.5 PDB: 2h2d_A* 2h2f_A 2h2g_A* 2h2h_A* 2h2i_A* 2h4f_A* 2h4j_A* 3d4b_A* 3d81_A* 3pdh_A* 2h4h_A* 3jr3_A* 2h59_A*
Probab=99.59 E-value=2.1e-16 Score=113.34 Aligned_cols=41 Identities=39% Similarity=0.759 Sum_probs=29.5
Q ss_pred HHHHHHHHHhCCcEEEEccCCCCccCCCCCCCCcc-hhhhcc
Q psy8974 34 IKVLSEWIDKAKHVVLHTGAGISTSAGIPDFSGPH-YWRRRV 74 (79)
Q Consensus 34 ~~~l~~~l~~s~~ivvltGAGiSt~sGIPdfR~~~-~w~~~~ 74 (79)
+++++++|+++++|||+||||||++|||||||+++ +|+.+.
T Consensus 3 i~~l~~~l~~a~~ivv~tGAGiS~~SGIpdfR~~~Glw~~~~ 44 (246)
T 1yc5_A 3 MKEFLDLLNESRLTVTLTGAGISTPSGIPDFRGPNGIYKKYS 44 (246)
T ss_dssp CHHHHHHHHHCSSEEEEECGGGTGGGTCCCC-----------
T ss_pred HHHHHHHHHhCCCEEEEECceeehhhCCCCccCCCcccccCC
Confidence 46789999999999999999999999999999999 998754
No 9
>2hjh_A NAD-dependent histone deacetylase SIR2; protein, sirtuin, acetyl-ADP-ribose, nicotinamide, hydrolase; HET: XYQ; 1.85A {Saccharomyces cerevisiae}
Probab=99.58 E-value=6.5e-16 Score=116.32 Aligned_cols=41 Identities=34% Similarity=0.666 Sum_probs=38.4
Q ss_pred HHHHHHHHHHhCCcEEEEccCCCCccCCCCCCCCcc-hhhhc
Q psy8974 33 KIKVLSEWIDKAKHVVLHTGAGISTSAGIPDFSGPH-YWRRR 73 (79)
Q Consensus 33 ~~~~l~~~l~~s~~ivvltGAGiSt~sGIPdfR~~~-~w~~~ 73 (79)
.++.|+++|+++++|||+|||||||+||||||||++ +|+..
T Consensus 35 ~i~~l~~~l~~a~~IvvlTGAGISt~SGIPdFR~~~Glw~~~ 76 (354)
T 2hjh_A 35 TIDHFIQKLHTARKILVLTGAGVSTSLGIPDFRSSEGFYSKI 76 (354)
T ss_dssp SHHHHHHHHHHCSSEEEEECGGGGGGGTCCCSSSTTSHHHHT
T ss_pred HHHHHHHHHHhCCcEEEEECchhhHhhCCCcccCcchHHHHH
Confidence 467899999999999999999999999999999999 99874
No 10
>1m2k_A Silent information regulator 2; protein-ligand complex, gene regulation; HET: APR; 1.47A {Archaeoglobus fulgidus} SCOP: c.31.1.5 PDB: 1m2g_A* 1m2h_A* 1m2j_A* 1m2n_A* 1ici_A*
Probab=99.58 E-value=6.9e-16 Score=110.97 Aligned_cols=40 Identities=40% Similarity=0.669 Sum_probs=37.1
Q ss_pred HHHHHHHHhCCcEEEEccCCCCccCCCCCCCCcc-hhhhcc
Q psy8974 35 KVLSEWIDKAKHVVLHTGAGISTSAGIPDFSGPH-YWRRRV 74 (79)
Q Consensus 35 ~~l~~~l~~s~~ivvltGAGiSt~sGIPdfR~~~-~w~~~~ 74 (79)
++++++|+++++|||+||||||++|||||||+++ +|+.+.
T Consensus 3 ~~l~~~i~~a~~ivvltGAGiS~~SGIPdfR~~~Glw~~~~ 43 (249)
T 1m2k_A 3 EKLLKTIAESKYLVALTGAGVSAESGIPTFRGKDGLWNRYR 43 (249)
T ss_dssp HHHHHHHHTCSSEEEEECGGGGGGGTCCCSSSTTCHHHHSC
T ss_pred HHHHHHHHhCCCEEEEECchhhhhhCCCCccCCCcCccCCC
Confidence 4688999999999999999999999999999999 998753
No 11
>3glr_A NAD-dependent deacetylase sirtuin-3, mitochondria; NAD dependent deacetylase, sirtuin, substrate peptide comple hydrolase, metal-binding; HET: ALY; 1.80A {Homo sapiens} PDB: 3gls_A 3glt_A* 3glu_A 4hd8_A* 4fvt_A*
Probab=99.55 E-value=1.9e-15 Score=111.75 Aligned_cols=41 Identities=39% Similarity=0.698 Sum_probs=37.3
Q ss_pred HHHHHHHHHHh--CCcEEEEccCCCCccCCCCCCCCc-c-hhhhc
Q psy8974 33 KIKVLSEWIDK--AKHVVLHTGAGISTSAGIPDFSGP-H-YWRRR 73 (79)
Q Consensus 33 ~~~~l~~~l~~--s~~ivvltGAGiSt~sGIPdfR~~-~-~w~~~ 73 (79)
.++.++++|++ +++|||+|||||||+|||||||++ + +|+..
T Consensus 10 ~l~~la~~i~~~~a~~IvvlTGAGISteSGIPdFR~~~~Glw~~~ 54 (285)
T 3glr_A 10 SLQDVAELIRARACQRVVVMVGAGISTPSGIPDFRSPGSGLYSNL 54 (285)
T ss_dssp CHHHHHHHHHTTSCCCEEEEECGGGTGGGTCCCTTSSSSHHHHHH
T ss_pred CHHHHHHHHHhcCCCeEEEEeCCccchhhCCCCcccCCCccccch
Confidence 37889999997 899999999999999999999998 5 99865
No 12
>4iao_A NAD-dependent histone deacetylase SIR2; protein complex, deacetylase, nucleus, hydrolase-trans complex; HET: APR; 2.90A {Saccharomyces cerevisiae}
Probab=99.52 E-value=3.8e-15 Score=117.38 Aligned_cols=40 Identities=35% Similarity=0.682 Sum_probs=37.3
Q ss_pred HHHHHHHHHhCCcEEEEccCCCCccCCCCCCCCcc-hhhhc
Q psy8974 34 IKVLSEWIDKAKHVVLHTGAGISTSAGIPDFSGPH-YWRRR 73 (79)
Q Consensus 34 ~~~l~~~l~~s~~ivvltGAGiSt~sGIPdfR~~~-~w~~~ 73 (79)
++.++++|+++++|||+|||||||+|||||||+++ +|+..
T Consensus 174 i~~l~~~L~~ak~IVVLTGAGISTeSGIPDFRs~~GLw~~~ 214 (492)
T 4iao_A 174 IDHFIQKLHTARKILVLTGAGVSTSLGIPDFRSSEGFYSKI 214 (492)
T ss_dssp HHHHHHHHHHCSCEEEEECGGGGGGGTCCCSSSTTSHHHHH
T ss_pred HHHHHHHHHhCCcEEEEeCcccccccCCccccCchHHHHhh
Confidence 56788999999999999999999999999999999 99875
No 13
>1j8f_A SIRT2, sirtuin 2, isoform 1, silencing INFO; gene regulation, transferase; 1.70A {Homo sapiens} SCOP: c.31.1.5
Probab=99.50 E-value=8.7e-15 Score=109.26 Aligned_cols=41 Identities=37% Similarity=0.706 Sum_probs=37.5
Q ss_pred HHHHHHHHHHh--CCcEEEEccCCCCccCCCCCCCCc-c-hhhhc
Q psy8974 33 KIKVLSEWIDK--AKHVVLHTGAGISTSAGIPDFSGP-H-YWRRR 73 (79)
Q Consensus 33 ~~~~l~~~l~~--s~~ivvltGAGiSt~sGIPdfR~~-~-~w~~~ 73 (79)
.++.++++|++ +++|||+|||||||+|||||||++ + +|+..
T Consensus 30 ~l~~l~~~i~~~~a~~ivvltGAGiSt~SGIPdfR~~~~Glw~~~ 74 (323)
T 1j8f_A 30 TLEGVARYMQSERCRRVICLVGAGISTSAGIPDFRSPSTGLYDNL 74 (323)
T ss_dssp SHHHHHHHHHSTTCCCEEEEECGGGTGGGTCCCTTCSCSTTSTTT
T ss_pred HHHHHHHHHHhcCCCcEEEEecchhhHhhCCCcccCCCccHHHHh
Confidence 37789999996 899999999999999999999999 6 99875
No 14
>1s5p_A NAD-dependent deacetylase; protein deacetylase, SIR2 homologue, hydrolase; HET: ALY; 1.96A {Escherichia coli} SCOP: c.31.1.5
Probab=99.40 E-value=3.2e-14 Score=101.56 Aligned_cols=31 Identities=35% Similarity=0.669 Sum_probs=28.6
Q ss_pred CCcEEEEccCCCCccCCCCCCCCcc-hhhhcc
Q psy8974 44 AKHVVLHTGAGISTSAGIPDFSGPH-YWRRRV 74 (79)
Q Consensus 44 s~~ivvltGAGiSt~sGIPdfR~~~-~w~~~~ 74 (79)
|++|||+||||||++|||||||+++ +|+...
T Consensus 1 a~~ivvltGAGiS~~SGIPdfR~~~Glw~~~~ 32 (235)
T 1s5p_A 1 KPRVLVLTGAGISAESGIRTFRAADGLWEEHR 32 (235)
T ss_dssp CCCEEEEECTHHHHTTTCCCCCSSSCEETTEE
T ss_pred CCcEEEEechhhhhhhCCCCCCCCCCCccCCC
Confidence 5899999999999999999999999 998653
No 15
>3cf4_G Acetyl-COA decarboxylase/synthase epsilon subunit; methanomicrobia, iron-nikel-sulfur, 4Fe-NI-4S, oxidoreductas; 2.00A {Methanosarcina barkeri}
Probab=82.97 E-value=1.1 Score=29.43 Aligned_cols=23 Identities=26% Similarity=0.234 Sum_probs=21.1
Q ss_pred HHHHHHHHHhCCcEEEEccCCCC
Q psy8974 34 IKVLSEWIDKAKHVVLHTGAGIS 56 (79)
Q Consensus 34 ~~~l~~~l~~s~~ivvltGAGiS 56 (79)
+++++++|++|++.+++.|.|+.
T Consensus 24 v~~aa~~L~~AkrPvil~G~g~~ 46 (170)
T 3cf4_G 24 PEMAAKIISKAKRPLLMVGTLAL 46 (170)
T ss_dssp HHHHHHHHHHCSSEEEEECSTTC
T ss_pred HHHHHHHHHcCCCCEEEECCCcc
Confidence 67889999999999999999985
No 16
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=80.09 E-value=0.54 Score=29.22 Aligned_cols=14 Identities=57% Similarity=0.842 Sum_probs=12.4
Q ss_pred CcEEEEccCCCCcc
Q psy8974 45 KHVVLHTGAGISTS 58 (79)
Q Consensus 45 ~~ivvltGAGiSt~ 58 (79)
++|++.+|+|+||+
T Consensus 4 kkIll~Cg~G~sTS 17 (106)
T 1e2b_A 4 KHIYLFSSAGMSTS 17 (106)
T ss_dssp EEEEEECSSSTTTH
T ss_pred cEEEEECCCchhHH
Confidence 47999999999985
No 17
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=69.34 E-value=1.3 Score=27.63 Aligned_cols=14 Identities=21% Similarity=0.631 Sum_probs=12.3
Q ss_pred CcEEEEccCCCCcc
Q psy8974 45 KHVVLHTGAGISTS 58 (79)
Q Consensus 45 ~~ivvltGAGiSt~ 58 (79)
++|++.+|+|++|+
T Consensus 22 kkIlvvC~sG~gTS 35 (113)
T 1tvm_A 22 RKIIVACGGAVATS 35 (113)
T ss_dssp EEEEEESCSCSSHH
T ss_pred cEEEEECCCCHHHH
Confidence 57999999999975
No 18
>3eya_A Pyruvate dehydrogenase [cytochrome]; pyruvate oxidase, membrane-associated flavoprotein dehydrogenase, interactions with lipids cell membrane; HET: TDP FAD; 2.50A {Escherichia coli} PDB: 3ey9_A*
Probab=64.80 E-value=5.5 Score=30.28 Aligned_cols=26 Identities=15% Similarity=0.482 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHHhCCcEEEEccCCCC
Q psy8974 31 DKKIKVLSEWIDKAKHVVLHTGAGIS 56 (79)
Q Consensus 31 ~~~~~~l~~~l~~s~~ivvltGAGiS 56 (79)
.+.+++++++|+++++.||+.|.|++
T Consensus 188 ~~~i~~~~~~l~~A~rpvIl~G~g~~ 213 (549)
T 3eya_A 188 EEELRKLAQLLRYSSNIALMCGSGCA 213 (549)
T ss_dssp HHHHHHHHHHHHTCCSEEEEECGGGT
T ss_pred HHHHHHHHHHHHhCCCcEEEECCCch
Confidence 35688889999999999999999974
No 19
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=64.78 E-value=3.1 Score=25.46 Aligned_cols=13 Identities=54% Similarity=0.836 Sum_probs=11.5
Q ss_pred cEEEEccCCCCcc
Q psy8974 46 HVVLHTGAGISTS 58 (79)
Q Consensus 46 ~ivvltGAGiSt~ 58 (79)
+|++.+|+|++|+
T Consensus 6 kIlvvC~~G~~TS 18 (109)
T 2l2q_A 6 NILLVCGAGMSTS 18 (109)
T ss_dssp EEEEESSSSCSSC
T ss_pred EEEEECCChHhHH
Confidence 4899999999986
No 20
>2vbi_A Pyruvate decarboxylase; thiamine pyrophosphate, lyase, pyruv flavoprotein, THDP-dependent enzyme; HET: TPP; 2.75A {Acetobacter pasteurianus}
Probab=62.92 E-value=9.7 Score=28.96 Aligned_cols=28 Identities=11% Similarity=0.270 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHHHhCCcEEEEccCCCC
Q psy8974 29 DFDKKIKVLSEWIDKAKHVVLHTGAGIS 56 (79)
Q Consensus 29 ~~~~~~~~l~~~l~~s~~ivvltGAGiS 56 (79)
...+.+++++++|.++++.+++.|.|+.
T Consensus 194 ~~~~~i~~~~~~l~~a~rpvi~~G~g~~ 221 (566)
T 2vbi_A 194 SLKAAVDATVALLEKSASPVMLLGSKLR 221 (566)
T ss_dssp HHHHHHHHHHHHHHTCSCEEEEECTTTT
T ss_pred hHHHHHHHHHHHHHhCCCCEEEECcCcc
Confidence 3456688999999999999999999985
No 21
>2wvg_A PDC, pyruvate decarboxylase; thiamine diphosphate, lyase, flavoprotein, metal-binding, alcohol fermentation; HET: TPU; 1.75A {Zymomonas mobilis} PDB: 2wva_A* 2wvh_A 3oe1_A* 1zpd_A*
Probab=62.33 E-value=9.1 Score=29.15 Aligned_cols=28 Identities=11% Similarity=0.303 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHHHhCCcEEEEccCCCC
Q psy8974 29 DFDKKIKVLSEWIDKAKHVVLHTGAGIS 56 (79)
Q Consensus 29 ~~~~~~~~l~~~l~~s~~ivvltGAGiS 56 (79)
...+.+++++++|.++++.+++.|.|+.
T Consensus 194 ~~~~~i~~~~~~l~~a~rpvil~G~g~~ 221 (568)
T 2wvg_A 194 SLNAAVEETLKFIANRDKVAVLVGSKLR 221 (568)
T ss_dssp HHHHHHHHHHHHHTTCCCEEEEECTTTT
T ss_pred ccHHHHHHHHHHHHhCCCCEEEECcccc
Confidence 3346688999999999999999999985
No 22
>3fxa_A SIS domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.60A {Listeria monocytogenes str}
Probab=60.49 E-value=5.9 Score=25.76 Aligned_cols=25 Identities=20% Similarity=0.258 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHhCCcEEEEccCCCC
Q psy8974 32 KKIKVLSEWIDKAKHVVLHTGAGIS 56 (79)
Q Consensus 32 ~~~~~l~~~l~~s~~ivvltGAGiS 56 (79)
+.+++++++|.++++-|++.|.|-|
T Consensus 32 ~~i~~~~~~i~~a~~~I~i~G~G~S 56 (201)
T 3fxa_A 32 EALVKTVEKIAECTGKIVVAGCGTS 56 (201)
T ss_dssp HHHHHHHHHHHHCSSCEEEECCTHH
T ss_pred HHHHHHHHHHHhcCCcEEEEEecHH
Confidence 4678889999999645677888876
No 23
>1vkr_A Mannitol-specific PTS system enzyme iiabc compone; phosphotransferase, transferase, kinase, sugar transport; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1vrv_A* 2few_B*
Probab=60.48 E-value=1.9 Score=27.47 Aligned_cols=15 Identities=20% Similarity=0.574 Sum_probs=12.8
Q ss_pred CCcEEEEccCCCCcc
Q psy8974 44 AKHVVLHTGAGISTS 58 (79)
Q Consensus 44 s~~ivvltGAGiSt~ 58 (79)
-++|++.+|+|++|+
T Consensus 13 ~kkIlvVC~sGmgTS 27 (125)
T 1vkr_A 13 VRKIIVACDAGMGSS 27 (125)
T ss_dssp CCEEEECCSSSSHHH
T ss_pred ccEEEEECCCcHHHH
Confidence 468999999999875
No 24
>1ybh_A Acetolactate synthase, chloroplast; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: CIE NHE FAD P22; 2.50A {Arabidopsis thaliana} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1yhy_A* 1yhz_A* 1yi0_A* 1yi1_A* 1z8n_A* 3ea4_A* 3e9y_A*
Probab=59.81 E-value=8.5 Score=29.52 Aligned_cols=25 Identities=24% Similarity=0.391 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHhCCcEEEEccCCCC
Q psy8974 32 KKIKVLSEWIDKAKHVVLHTGAGIS 56 (79)
Q Consensus 32 ~~~~~l~~~l~~s~~ivvltGAGiS 56 (79)
+.+++++++|.++++.|++.|.|+.
T Consensus 202 ~~i~~~~~~l~~a~rpvIl~G~g~~ 226 (590)
T 1ybh_A 202 SHLEQIVRLISESKKPVLYVGGGCL 226 (590)
T ss_dssp HHHHHHHHHHHHCSSEEEEECGGGT
T ss_pred HHHHHHHHHHHhCCCcEEEECcccc
Confidence 5588899999999999999999975
No 25
>4feg_A Pyruvate oxidase; carbanion, structure activity relationship, oxidation-reduct umpolung, thiamine diphosphate, reaction intermediate; HET: TDM FAD GOL; 1.09A {Lactobacillus plantarum} PDB: 4fee_A* 1y9d_A* 2ez9_A* 2ez4_A* 2ez8_A* 2ezt_A* 2ezu_A* 1pow_A* 1pox_A*
Probab=57.72 E-value=8.4 Score=29.73 Aligned_cols=25 Identities=16% Similarity=0.251 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHhCCcEEEEccCCCC
Q psy8974 32 KKIKVLSEWIDKAKHVVLHTGAGIS 56 (79)
Q Consensus 32 ~~~~~l~~~l~~s~~ivvltGAGiS 56 (79)
+.+++++++|+++++.||+.|.|++
T Consensus 200 ~~i~~~~~~l~~A~rPvIl~G~g~~ 224 (603)
T 4feg_A 200 QAVTRLTQTLLAAERPLIYYGIGAR 224 (603)
T ss_dssp HHHHHHHHHHHHCSSEEEEECGGGT
T ss_pred HHHHHHHHHHhcCCCeEEEECCCch
Confidence 4678889999999999999999983
No 26
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=56.98 E-value=2.6 Score=26.36 Aligned_cols=15 Identities=7% Similarity=0.093 Sum_probs=12.3
Q ss_pred CCcEEEEccCCCCcc
Q psy8974 44 AKHVVLHTGAGISTS 58 (79)
Q Consensus 44 s~~ivvltGAGiSt~ 58 (79)
..+|+++++||+||+
T Consensus 6 ~mkIlL~C~aGmSTs 20 (108)
T 3nbm_A 6 ELKVLVLCAGSGTSA 20 (108)
T ss_dssp CEEEEEEESSSSHHH
T ss_pred CceEEEECCCCCCHH
Confidence 347999999999874
No 27
>3rgo_A Protein-tyrosine phosphatase mitochondrial 1; phosphatidylglycerol phosphate (PGP) phosphatase, hydrolase; 1.93A {Mus musculus} PDB: 3rgq_A*
Probab=56.55 E-value=23 Score=21.61 Aligned_cols=31 Identities=23% Similarity=0.314 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHHHHHhCCcEEEEccCCCCcc
Q psy8974 28 EDFDKKIKVLSEWIDKAKHVVLHTGAGISTS 58 (79)
Q Consensus 28 ~~~~~~~~~l~~~l~~s~~ivvltGAGiSt~ 58 (79)
..+.+.++.+.+.++..+.++|.+-||++..
T Consensus 73 ~~~~~~~~~i~~~~~~~~~vlVHC~~G~~Rs 103 (157)
T 3rgo_A 73 ANLHKGVQFALKYQALGQCVYVHCKAGRSRS 103 (157)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEESSSSSSHH
T ss_pred HHHHHHHHHHHHHHHCCCEEEEECCCCCChH
Confidence 4445555555556666689999999999743
No 28
>1ozh_A ALS, acetolactate synthase, catabolic; acetohydroxyacid synthase, thiamin diphosphate, lyase; HET: PGE HE3; 2.00A {Klebsiella pneumoniae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1ozg_A* 1ozf_A*
Probab=56.04 E-value=9.4 Score=29.16 Aligned_cols=25 Identities=24% Similarity=0.294 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHhCCcEEEEccCCCC
Q psy8974 32 KKIKVLSEWIDKAKHVVLHTGAGIS 56 (79)
Q Consensus 32 ~~~~~l~~~l~~s~~ivvltGAGiS 56 (79)
+.+++++++|.++++.+++.|.|+.
T Consensus 195 ~~i~~~~~~l~~a~rpvil~G~g~~ 219 (566)
T 1ozh_A 195 DAIDQVAKLIAQAKNPIFLLGLMAS 219 (566)
T ss_dssp HHHHHHHHHHHHCSSEEEEECGGGG
T ss_pred HHHHHHHHHHHcCCCeEEEECCCcc
Confidence 4578899999999999999999974
No 29
>1ovm_A Indole-3-pyruvate decarboxylase; thiamine diphosphate, indole-3-acetic acid, TDP dependent enzyme, lyase; HET: TPP; 2.65A {Enterobacter cloacae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9
Probab=55.94 E-value=7.8 Score=29.28 Aligned_cols=29 Identities=7% Similarity=-0.073 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHHHHhCCcEEEEccCCCC
Q psy8974 28 EDFDKKIKVLSEWIDKAKHVVLHTGAGIS 56 (79)
Q Consensus 28 ~~~~~~~~~l~~~l~~s~~ivvltGAGiS 56 (79)
....+.+++++++|.++++.+++.|.|+.
T Consensus 193 ~~~~~~i~~~~~~l~~a~rpvil~G~g~~ 221 (552)
T 1ovm_A 193 ACLKAFRDAAENKLAMSKRTALLADFLVL 221 (552)
T ss_dssp HHHHHHHHHHHHHHHTCSCEEEEECHHHH
T ss_pred cchHHHHHHHHHHHHhCCCCEEEECcCcc
Confidence 34456789999999999999999999984
No 30
>2yva_A DNAA initiator-associating protein DIAA; intermolecular disulfide bonding, putative phosphosugar BIND protein, DNAA binding protein; 1.85A {Escherichia coli}
Probab=55.34 E-value=9.9 Score=24.42 Aligned_cols=27 Identities=15% Similarity=0.271 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHHHhCCcEEEEccCCCC
Q psy8974 29 DFDKKIKVLSEWIDKAKHVVLHTGAGIS 56 (79)
Q Consensus 29 ~~~~~~~~l~~~l~~s~~ivvltGAGiS 56 (79)
.+++.++.+++.|.++++|+ +.|.|-|
T Consensus 26 ~i~~~~~~~~~~i~~a~~I~-i~G~G~S 52 (196)
T 2yva_A 26 AISRAAMTLVQSLLNGNKIL-CCGNGTS 52 (196)
T ss_dssp HHHHHHHHHHHHHHTTCCEE-EEESTHH
T ss_pred HHHHHHHHHHHHHHcCCEEE-EEeCchh
Confidence 34467888899999988765 5677766
No 31
>2q28_A Oxalyl-COA decarboxylase; lyase, oxalate degradation, thiami diphosphate, lyase; HET: TPP ADP MES; 1.74A {Escherichia coli} PDB: 2q27_A* 2q29_A*
Probab=53.51 E-value=6.9 Score=29.74 Aligned_cols=25 Identities=20% Similarity=0.326 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHhCCcEEEEccCCCC
Q psy8974 32 KKIKVLSEWIDKAKHVVLHTGAGIS 56 (79)
Q Consensus 32 ~~~~~l~~~l~~s~~ivvltGAGiS 56 (79)
+.+++++++|+++++.||+.|.|+.
T Consensus 199 ~~i~~~~~~l~~a~rpvIl~G~g~~ 223 (564)
T 2q28_A 199 KSVTSAISLLAKAERPLIILGKGAA 223 (564)
T ss_dssp HHHHHHHHHHHHCSSEEEEECHHHH
T ss_pred HHHHHHHHHHHcCCCcEEEECcccc
Confidence 4588899999999999999999874
No 32
>2vk8_A Pyruvate decarboxylase isozyme 1; asymmetric active sites, phenylalanine catabolism, tryptophan catabolism, thiamine pyrophosphate; HET: TPP; 1.42A {Saccharomyces cerevisiae} PDB: 1qpb_A* 2vk1_A* 2w93_A* 1pyd_A* 1pvd_A* 2vk4_A* 2vjy_A* 2g1i_A*
Probab=53.45 E-value=9.5 Score=28.95 Aligned_cols=27 Identities=22% Similarity=0.094 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHHHhCCcEEEEccCCCC
Q psy8974 30 FDKKIKVLSEWIDKAKHVVLHTGAGIS 56 (79)
Q Consensus 30 ~~~~~~~l~~~l~~s~~ivvltGAGiS 56 (79)
..+.+++++++|+++++.||+.|.|+.
T Consensus 197 ~~~~i~~~~~~l~~a~rpvIl~G~g~~ 223 (563)
T 2vk8_A 197 EKEVIDTILVLDKDAKNPVILADACCS 223 (563)
T ss_dssp HHHHHHHHHHHHHHCSSEEEEECHHHH
T ss_pred hHHHHHHHHHHHHhCCCCEEEECcCcc
Confidence 345688999999999999999999873
No 33
>2bp3_S Platelet glycoprotein IB alpha chain; structural protein, cytoskeleton/complex, actin binding protein, cytoskeleton, complex; 2.32A {Homo sapiens}
Probab=53.16 E-value=2.9 Score=20.48 Aligned_cols=14 Identities=29% Similarity=0.774 Sum_probs=11.6
Q ss_pred CCCCCCCcc-hhhhc
Q psy8974 60 GIPDFSGPH-YWRRR 73 (79)
Q Consensus 60 GIPdfR~~~-~w~~~ 73 (79)
.+|+||+.- +|-..
T Consensus 4 slptfrsslflwvr~ 18 (26)
T 2bp3_S 4 SLPTFRSSLFLWVRP 18 (26)
T ss_pred cccchhheEEEEEcc
Confidence 389999998 99754
No 34
>1x92_A APC5045, phosphoheptose isomerase; midwest centre for structural genomics, SIS domain, A/B protein, lipopolysaccharide biosynthesis, PSI; HET: M7P; 2.30A {Pseudomonas aeruginosa} SCOP: c.80.1.3 PDB: 3bjz_A
Probab=53.04 E-value=13 Score=23.88 Aligned_cols=27 Identities=15% Similarity=0.181 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHHHHhCCcEEEEccCCCC
Q psy8974 29 DFDKKIKVLSEWIDKAKHVVLHTGAGIS 56 (79)
Q Consensus 29 ~~~~~~~~l~~~l~~s~~ivvltGAGiS 56 (79)
.+++.++.+++.|.++++|+ +.|.|-|
T Consensus 30 ~i~~~~~~i~~~i~~a~~I~-i~G~G~S 56 (199)
T 1x92_A 30 YIEQASLVMVNALLNEGKIL-SCGNGGS 56 (199)
T ss_dssp HHHHHHHHHHHHHHTTCCEE-EECSTHH
T ss_pred HHHHHHHHHHHHHHCCCEEE-EEcCchh
Confidence 34455666668888887765 5688865
No 35
>2nxw_A Phenyl-3-pyruvate decarboxylase; thiamine pyrophosphate, asymmetric dimer of dimers, open ACT loops, lyase; HET: TPP; 1.50A {Azospirillum brasilense} PDB: 2q5j_A* 2q5l_A* 2q5o_A* 2q5q_A*
Probab=52.14 E-value=10 Score=28.96 Aligned_cols=29 Identities=10% Similarity=0.047 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHHHHHhCCcEEEEccCCCC
Q psy8974 28 EDFDKKIKVLSEWIDKAKHVVLHTGAGIS 56 (79)
Q Consensus 28 ~~~~~~~~~l~~~l~~s~~ivvltGAGiS 56 (79)
....+.+++++++|.++++.+|+.|.|+.
T Consensus 206 ~~~~~~i~~~~~~l~~a~rpvIl~G~g~~ 234 (565)
T 2nxw_A 206 DALAACADEVLAAMRSATSPVLMVCVEVR 234 (565)
T ss_dssp HHHHHHHHHHHHHHHHCSSEEEEECHHHH
T ss_pred hhhHHHHHHHHHHHHcCCCCEEEECCCcc
Confidence 33446788999999999999999998864
No 36
>1ytl_A Acetyl-COA decarboxylase/synthase complex epsilon 2; structural genomics; 1.80A {Archaeoglobus fulgidus} SCOP: c.31.1.6
Probab=52.10 E-value=9 Score=25.70 Aligned_cols=22 Identities=27% Similarity=0.172 Sum_probs=19.4
Q ss_pred HHHH-HHHHHhCCcEEEEccCCCC
Q psy8974 34 IKVL-SEWIDKAKHVVLHTGAGIS 56 (79)
Q Consensus 34 ~~~l-~~~l~~s~~ivvltGAGiS 56 (79)
++++ +++|++|++-|++.|. +.
T Consensus 24 i~~a~a~lI~~AkRPvIl~Gg-v~ 46 (174)
T 1ytl_A 24 KGKPVANMIKKAKRPLLIVGP-DM 46 (174)
T ss_dssp CHHHHHHHHHHCSSEEEEECS-CC
T ss_pred HHHHHHHHHHcCCCCEEEECC-CC
Confidence 5677 9999999999999999 75
No 37
>3czc_A RMPB; alpha/beta sandwich, phosphotransferase system, transferase, transport; 2.02A {Streptococcus mutans}
Probab=52.09 E-value=2.3 Score=26.18 Aligned_cols=14 Identities=29% Similarity=0.501 Sum_probs=12.2
Q ss_pred CcEEEEccCCCCcc
Q psy8974 45 KHVVLHTGAGISTS 58 (79)
Q Consensus 45 ~~ivvltGAGiSt~ 58 (79)
++|++.+|+|++|+
T Consensus 19 ~kIlvvC~sG~gTS 32 (110)
T 3czc_A 19 VKVLTACGNGMGSS 32 (110)
T ss_dssp EEEEEECCCCHHHH
T ss_pred cEEEEECCCcHHHH
Confidence 67999999999865
No 38
>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A {Aerococcus viridans} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2dji_A* 1v5f_A* 1v5g_A*
Probab=51.96 E-value=12 Score=28.79 Aligned_cols=24 Identities=25% Similarity=0.454 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHhCCcEEEEccCCC
Q psy8974 32 KKIKVLSEWIDKAKHVVLHTGAGI 55 (79)
Q Consensus 32 ~~~~~l~~~l~~s~~ivvltGAGi 55 (79)
+.+++++++|.++++.+++.|.|+
T Consensus 193 ~~i~~~~~~l~~a~rpvil~G~g~ 216 (590)
T 1v5e_A 193 QDIDAAVELLNNSKRPVIYAGIGT 216 (590)
T ss_dssp HHHHHHHHHHHHCSSEEEEECGGG
T ss_pred HHHHHHHHHHHhCCCeEEEEcCch
Confidence 568889999999999999999998
No 39
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=51.74 E-value=15 Score=23.28 Aligned_cols=25 Identities=36% Similarity=0.492 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHhCCcEEEEccCCCCc
Q psy8974 32 KKIKVLSEWIDKAKHVVLHTGAGIST 57 (79)
Q Consensus 32 ~~~~~l~~~l~~s~~ivvltGAGiSt 57 (79)
+.+++++++|.++++ |++.|.|-|.
T Consensus 27 ~~l~~~~~~i~~a~~-I~i~G~G~S~ 51 (187)
T 3sho_A 27 EAIEAAVEAICRADH-VIVVGMGFSA 51 (187)
T ss_dssp HHHHHHHHHHHHCSE-EEEECCGGGH
T ss_pred HHHHHHHHHHHhCCE-EEEEecCchH
Confidence 457788889999875 5667888763
No 40
>3cvj_A Putative phosphoheptose isomerase; rossman fold, 3-layer (ABA) sandwich, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.00A {Bacillus halodurans c-125}
Probab=51.40 E-value=18 Score=24.23 Aligned_cols=25 Identities=24% Similarity=0.234 Sum_probs=14.6
Q ss_pred HHHHHHHHHHHhCCcEEEEccCCCCc
Q psy8974 32 KKIKVLSEWIDKAKHVVLHTGAGIST 57 (79)
Q Consensus 32 ~~~~~l~~~l~~s~~ivvltGAGiSt 57 (79)
+.++.+.+.|.++++|+ +.|.|-|.
T Consensus 30 ~a~~~l~~~i~~~~~I~-i~G~G~S~ 54 (243)
T 3cvj_A 30 KGAHLVSEAVMNGGRFY-VFGSGHSH 54 (243)
T ss_dssp HHHHHHHHHHHTTCCEE-EEESGGGH
T ss_pred HHHHHHHHHHHCCCEEE-EEcCcHHH
Confidence 33344445555567765 55888764
No 41
>2c31_A Oxalyl-COA decarboxylase; oxalate, thiamin diphosphate, flavoprotein, lyase, thiamine pyrophosphate; HET: TZD ADP; 1.73A {Oxalobacter formigenes} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2ji6_A* 2ji7_A* 2ji8_A* 2ji9_A* 2jib_A*
Probab=51.11 E-value=7.6 Score=29.60 Aligned_cols=25 Identities=28% Similarity=0.401 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHhCCcEEEEccCCCC
Q psy8974 32 KKIKVLSEWIDKAKHVVLHTGAGIS 56 (79)
Q Consensus 32 ~~~~~l~~~l~~s~~ivvltGAGiS 56 (79)
+.+++++++|.++++.||+.|.|+.
T Consensus 201 ~~i~~~~~~l~~a~rpvIl~G~g~~ 225 (568)
T 2c31_A 201 DAIARAADLIKNAKRPVIMLGKGAA 225 (568)
T ss_dssp HHHHHHHHHHHTCSSEEEEECHHHH
T ss_pred HHHHHHHHHHHhCCCCEEEECcccc
Confidence 4578899999999999999998874
No 42
>1t9b_A Acetolactate synthase, mitochondrial; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: 1CS P25 FAD NSP P22 YF3; 2.20A {Saccharomyces cerevisiae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1n0h_A* 1t9a_A* 1t9c_A* 1t9d_A* 1jsc_A*
Probab=50.96 E-value=13 Score=29.52 Aligned_cols=26 Identities=38% Similarity=0.447 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHhCCcEEEEccCCCC
Q psy8974 31 DKKIKVLSEWIDKAKHVVLHTGAGIS 56 (79)
Q Consensus 31 ~~~~~~l~~~l~~s~~ivvltGAGiS 56 (79)
.+.+++++++|+++++.||+.|.|+.
T Consensus 276 ~~~i~~a~~~L~~AkrPvIl~G~g~~ 301 (677)
T 1t9b_A 276 MQSINKAADLINLAKKPVLYVGAGIL 301 (677)
T ss_dssp HHHHHHHHHHHHTCSSEEEEECGGGG
T ss_pred HHHHHHHHHHHHhCCCeEEEECcccc
Confidence 35688999999999999999999984
No 43
>2img_A Dual specificity protein phosphatase 23; DUSP23, VHZ, LDP-3, dual specicity protein phosphatase 23, DUS23_human, malate, structural genomics, PSI; 1.93A {Homo sapiens}
Probab=50.30 E-value=34 Score=20.52 Aligned_cols=29 Identities=17% Similarity=0.358 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHHHhCCcEEEEccCCCCc
Q psy8974 29 DFDKKIKVLSEWIDKAKHVVLHTGAGIST 57 (79)
Q Consensus 29 ~~~~~~~~l~~~l~~s~~ivvltGAGiSt 57 (79)
.+.+-++.+.+.+.....++|.+-||++.
T Consensus 74 ~~~~~~~~i~~~~~~~~~vlVHC~aG~~R 102 (151)
T 2img_A 74 QIDRFVQIVDEANARGEAVGVHCALGFGR 102 (151)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEECSSSSSH
T ss_pred HHHHHHHHHHHHHhCCCcEEEECCCCCCh
Confidence 34444555555555567899999999974
No 44
>2vkc_A NEDD4-binding protein 2; human BCL3 binding protein, alternative splicing, homologous recombination, mismatch repair, small MUTS related; NMR {Homo sapiens}
Probab=50.14 E-value=17 Score=23.12 Aligned_cols=22 Identities=18% Similarity=0.321 Sum_probs=16.9
Q ss_pred CcEEEEccCCCCccCCCCCCCC
Q psy8974 45 KHVVLHTGAGISTSAGIPDFSG 66 (79)
Q Consensus 45 ~~ivvltGAGiSt~sGIPdfR~ 66 (79)
+.+.|+||-|.-...|.|-.|.
T Consensus 88 ~~v~IIhGkG~hS~~g~~~Lk~ 109 (135)
T 2vkc_A 88 PYLSVITGRGNHSQGGVARIKP 109 (135)
T ss_dssp SEEEEECCSCSSSCCSCCTHHH
T ss_pred eEEEEEECCCcCCCCCCchHHH
Confidence 4689999999866677776664
No 45
>3emu_A Leucine rich repeat and phosphatase domain containing protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.30A {Entamoeba histolytica}
Probab=49.76 E-value=9.3 Score=24.39 Aligned_cols=30 Identities=17% Similarity=0.389 Sum_probs=19.9
Q ss_pred HHHHHHHHHHH----HhCCcEEEEccCCCCccCC
Q psy8974 31 DKKIKVLSEWI----DKAKHVVLHTGAGISTSAG 60 (79)
Q Consensus 31 ~~~~~~l~~~l----~~s~~ivvltGAGiSt~sG 60 (79)
...+.+..++| +..+.++|.+-||+|.++.
T Consensus 70 ~~~~~~~~~fI~~~~~~~~~VlVHC~~G~sRS~~ 103 (161)
T 3emu_A 70 YDSIPNAIKFIIRSIQRKEGVLIISGTGVNKAPA 103 (161)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEEESSSSSHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCeEEEEcCCCCcHHHH
Confidence 33344444444 4457899999999997543
No 46
>2iht_A Carboxyethylarginine synthase; thiamin diphosphate complex, transferase; HET: MSE TPP; 2.00A {Streptomyces clavuligerus} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1upb_A* 1upc_A* 1upa_A* 2ihu_A* 2ihv_A*
Probab=48.46 E-value=9.2 Score=29.21 Aligned_cols=26 Identities=31% Similarity=0.346 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHHhCCcEEEEccCCCC
Q psy8974 31 DKKIKVLSEWIDKAKHVVLHTGAGIS 56 (79)
Q Consensus 31 ~~~~~~l~~~l~~s~~ivvltGAGiS 56 (79)
.+.+++++++|+++++.|++.|.|+.
T Consensus 203 ~~~v~~~~~~l~~a~rpvIl~G~g~~ 228 (573)
T 2iht_A 203 QKAADQAAALLAEAKHPVLVVGAAAI 228 (573)
T ss_dssp HHHHHHHHHHHHHCSSEEEEECHHHH
T ss_pred HHHHHHHHHHHHcCCCeEEEECCCcc
Confidence 45688899999999999999998873
No 47
>2uz1_A Benzaldehyde lyase; thiamine diphosphate, thiamine pyrophosphate, benzoin, flavoprotein; HET: TPP; 1.65A {Pseudomonas fluorescens} PDB: 2ag1_A* 2ag0_A* 2uz1_B* 3iae_A* 3iaf_A* 3d7k_A*
Probab=48.41 E-value=9.2 Score=29.07 Aligned_cols=25 Identities=20% Similarity=0.231 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHhCCcEEEEccCCCC
Q psy8974 32 KKIKVLSEWIDKAKHVVLHTGAGIS 56 (79)
Q Consensus 32 ~~~~~l~~~l~~s~~ivvltGAGiS 56 (79)
+.+++++++|.++++.+++.|.|+.
T Consensus 192 ~~v~~~~~~l~~a~rpvil~G~g~~ 216 (563)
T 2uz1_A 192 ADLDQALALLRKAERPVIVLGSEAS 216 (563)
T ss_dssp HHHHHHHHHHHHCSSEEEEECHHHH
T ss_pred HHHHHHHHHHHcCCCcEEEECCccc
Confidence 4578899999999999999998874
No 48
>2d9i_A NEDD4-binding protein 2; SMR domain, N4BP2, BCL-3 binding protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.68.8.1
Probab=48.23 E-value=12 Score=22.25 Aligned_cols=22 Identities=18% Similarity=0.321 Sum_probs=16.2
Q ss_pred CcEEEEccCCCCccCCCCCCCC
Q psy8974 45 KHVVLHTGAGISTSAGIPDFSG 66 (79)
Q Consensus 45 ~~ivvltGAGiSt~sGIPdfR~ 66 (79)
+.+.|+||-|--...|.+-.|.
T Consensus 43 ~~v~IIhGkG~hS~~g~~~Lk~ 64 (96)
T 2d9i_A 43 PYLSVITGRGNHSQGGVARIKP 64 (96)
T ss_dssp SEEEEECCCSGGGTTCTTCHHH
T ss_pred eEEEEEECcCCCCCCCcchHHH
Confidence 4689999999866666665553
No 49
>2x7j_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene -1-carboxylate synthase; transferase, metal-binding; HET: TPP; 2.35A {Bacillus subtilis}
Probab=48.20 E-value=10 Score=29.24 Aligned_cols=25 Identities=16% Similarity=0.209 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHhCCcEEEEccCCCC
Q psy8974 32 KKIKVLSEWIDKAKHVVLHTGAGIS 56 (79)
Q Consensus 32 ~~~~~l~~~l~~s~~ivvltGAGiS 56 (79)
+.+++++++|+++++.||+.|.|+.
T Consensus 231 ~~i~~~~~~l~~A~rPvIl~G~g~~ 255 (604)
T 2x7j_A 231 ESLSDVAEMLAEAEKGMIVCGELHS 255 (604)
T ss_dssp GGGHHHHHHHHHCSSEEEEECCCCC
T ss_pred hhHHHHHHHHhhcCCeEEEECCCCc
Confidence 3477888999999999999999974
No 50
>3brc_A Conserved protein of unknown function; methanobacterium thermoautotrophicum, STR genomics, MCSG, PSI-2; 1.60A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=47.67 E-value=17 Score=24.78 Aligned_cols=23 Identities=13% Similarity=0.364 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHHhCCcEEEEccC
Q psy8974 31 DKKIKVLSEWIDKAKHVVLHTGA 53 (79)
Q Consensus 31 ~~~~~~l~~~l~~s~~ivvltGA 53 (79)
.+.++.+++.|.++++|||-|.-
T Consensus 23 ~EEv~~Ir~~I~nakkIvV~t~N 45 (156)
T 3brc_A 23 SEEVEAIRKYIRSARRTVVPNWN 45 (156)
T ss_dssp HHHHHHHHHHHHHCSCEEECCCC
T ss_pred HHHHHHHHHHHhcCCeEEEecCC
Confidence 35678899999999999997763
No 51
>3fau_A NEDD4-binding protein 2; SMR, small-MUTS related domain, nicking endonuclease, alternative splicing, ATP-binding, coiled coil, cytoplasm, hydrolase; 1.90A {Homo sapiens} SCOP: d.68.8.1
Probab=47.49 E-value=8.5 Score=22.33 Aligned_cols=24 Identities=17% Similarity=0.293 Sum_probs=11.1
Q ss_pred CCcEEEEccCCCCccCCCCCCCCc
Q psy8974 44 AKHVVLHTGAGISTSAGIPDFSGP 67 (79)
Q Consensus 44 s~~ivvltGAGiSt~sGIPdfR~~ 67 (79)
.+.+.|+||-|.-...|+|-.|..
T Consensus 34 ~~~v~II~GkG~hS~~g~~~Lk~~ 57 (82)
T 3fau_A 34 KPYLSVITGRGNHSQGGVARIKPA 57 (82)
T ss_dssp CCEEEEECCC---------CHHHH
T ss_pred ceEEEEEECCCCCCCCCcchHHHH
Confidence 356899999998666677776643
No 52
>2xhz_A KDSD, YRBH, arabinose 5-phosphate isomerase; lipopolysaccharide biogenesis; 2.60A {Escherichia coli}
Probab=47.42 E-value=7.3 Score=24.74 Aligned_cols=25 Identities=24% Similarity=0.178 Sum_probs=19.2
Q ss_pred HHHHHHHHHHhCCcEEEEccCCCCc
Q psy8974 33 KIKVLSEWIDKAKHVVLHTGAGIST 57 (79)
Q Consensus 33 ~~~~l~~~l~~s~~ivvltGAGiSt 57 (79)
.+++++++|.++++-|++.|.|-|.
T Consensus 37 ~i~~~~~~i~~a~~~I~i~G~G~S~ 61 (183)
T 2xhz_A 37 NFTLACEKMFWCKGKVVVMGMGASG 61 (183)
T ss_dssp HHHHHHHHHHTCSSCEEEEECHHHH
T ss_pred HHHHHHHHHHhCCCeEEEEeecHHH
Confidence 6778888999887456678888764
No 53
>1tk9_A Phosphoheptose isomerase 1; lipopolysaccharide biosynthesis, structural genomics, NYSGXRC, LPC1_camje, PSI, protein structure initiative; 2.10A {Campylobacter jejuni} SCOP: c.80.1.3
Probab=47.25 E-value=17 Score=22.94 Aligned_cols=27 Identities=26% Similarity=0.338 Sum_probs=15.9
Q ss_pred HHHHHHHHHHHHHhCCcEEEEccCCCCc
Q psy8974 30 FDKKIKVLSEWIDKAKHVVLHTGAGIST 57 (79)
Q Consensus 30 ~~~~~~~l~~~l~~s~~ivvltGAGiSt 57 (79)
+++.++.+.+.|.++++|+ +.|.|-|.
T Consensus 28 i~~~~~~i~~~l~~~~~I~-i~G~G~S~ 54 (188)
T 1tk9_A 28 IAKVGELLCECLKKGGKIL-ICGNGGSA 54 (188)
T ss_dssp HHHHHHHHHHHHHTTCCEE-EEESTHHH
T ss_pred HHHHHHHHHHHHHCCCEEE-EEeCcHhH
Confidence 3333444455666787655 56888664
No 54
>4erc_A Dual specificity protein phosphatase 23; alpha beta, phosphatase(hydrolase), hydrolase; 1.15A {Homo sapiens} PDB: 2img_A
Probab=47.18 E-value=30 Score=20.87 Aligned_cols=30 Identities=17% Similarity=0.376 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHHHHhCCcEEEEccCCCCc
Q psy8974 28 EDFDKKIKVLSEWIDKAKHVVLHTGAGIST 57 (79)
Q Consensus 28 ~~~~~~~~~l~~~l~~s~~ivvltGAGiSt 57 (79)
..+.+-++.+.+.+.....++|.+-||++.
T Consensus 72 ~~~~~~~~~i~~~~~~~~~vlVHC~~G~~R 101 (150)
T 4erc_A 72 DQIDRFVQIVDEANARGEAVGVHCALGFGR 101 (150)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEECSSSSHH
T ss_pred HHHHHHHHHHHHHHHCCCCEEEECCCCCCH
Confidence 444444555555666668999999999974
No 55
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=46.55 E-value=13 Score=26.99 Aligned_cols=24 Identities=21% Similarity=0.437 Sum_probs=18.9
Q ss_pred HHHHHHHHHhCCcEEEEccCCCCc
Q psy8974 34 IKVLSEWIDKAKHVVLHTGAGIST 57 (79)
Q Consensus 34 ~~~l~~~l~~s~~ivvltGAGiSt 57 (79)
+..|+++++.+.+|.|+.|+||..
T Consensus 158 ~~~L~~Lv~~a~~i~Im~GgGv~~ 181 (256)
T 1twd_A 158 LSKIMELIAHRDAPIIMAGAGVRA 181 (256)
T ss_dssp HHHHHHHHTSSSCCEEEEESSCCT
T ss_pred HHHHHHHHHhhCCcEEEecCCcCH
Confidence 556777777666999999999964
No 56
>2vbf_A Branched-chain alpha-ketoacid decarboxylase; KDCA, flavoprotein, THDP-dependent enzymes, thiamine pyrophosphate, lyase; HET: TPP; 1.60A {Lactococcus lactis} PDB: 2vbg_A*
Probab=46.40 E-value=10 Score=28.84 Aligned_cols=26 Identities=15% Similarity=0.236 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHHhCCcEEEEccCCCC
Q psy8974 31 DKKIKVLSEWIDKAKHVVLHTGAGIS 56 (79)
Q Consensus 31 ~~~~~~l~~~l~~s~~ivvltGAGiS 56 (79)
.+.+++++++|.++++.+++.|.|+.
T Consensus 215 ~~~i~~~~~~l~~a~rpvil~G~g~~ 240 (570)
T 2vbf_A 215 QVILSKIEESLKNAQKPVVIAGHEVI 240 (570)
T ss_dssp HHHHHHHHHHHHHCSSEEEEECHHHH
T ss_pred HHHHHHHHHHHHcCCCCEEEECcCcc
Confidence 56788999999999999999999875
No 57
>2pan_A Glyoxylate carboligase; thiamin-diphosphate (THDP), thimain-dependent enzymes, FAD, lyase; HET: FAD TDP 1PE; 2.70A {Escherichia coli}
Probab=45.75 E-value=10 Score=29.23 Aligned_cols=26 Identities=23% Similarity=0.340 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHHhCCcEEEEccCCCC
Q psy8974 31 DKKIKVLSEWIDKAKHVVLHTGAGIS 56 (79)
Q Consensus 31 ~~~~~~l~~~l~~s~~ivvltGAGiS 56 (79)
.+.+++++++|.++++.+++.|.|+.
T Consensus 213 ~~~i~~~~~~l~~a~rpvil~G~g~~ 238 (616)
T 2pan_A 213 RMQIEKAVEMLIQAERPVIVAGGGVI 238 (616)
T ss_dssp HHHHHHHHHHHHTCSSEEEEECHHHH
T ss_pred HHHHHHHHHHHHcCCCeEEEECCCcC
Confidence 45688899999999999999998873
No 58
>3ot6_A Enoyl-COA hydratase/isomerase family protein; structural genomics, PSI-2, protein structure initiative; 2.50A {Pseudomonas syringae PV}
Probab=45.24 E-value=24 Score=23.98 Aligned_cols=33 Identities=21% Similarity=0.200 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHHHHhCCcEEEEccCCCCccCC
Q psy8974 28 EDFDKKIKVLSEWIDKAKHVVLHTGAGISTSAG 60 (79)
Q Consensus 28 ~~~~~~~~~l~~~l~~s~~ivvltGAGiSt~sG 60 (79)
.+|-..+.+..+.+....++||+||+|=.=.+|
T Consensus 31 ~~~~~~L~~al~~~~~d~~~vvltg~g~~F~aG 63 (232)
T 3ot6_A 31 PDVIIAFNAALDQAEKDRAIVIVTGQPGILSGG 63 (232)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEECBTEEEECC
T ss_pred HHHHHHHHHHHHHHhcCCCEEEEECCCCCccCC
Confidence 344455555444454556899999998554455
No 59
>1nri_A Hypothetical protein HI0754; structural genomics, haemophilus influ PSI, protein structure initiative, midwest center for struc genomics; 1.90A {Haemophilus influenzae} SCOP: c.80.1.3
Probab=45.16 E-value=13 Score=26.32 Aligned_cols=25 Identities=16% Similarity=0.292 Sum_probs=17.0
Q ss_pred HHHHHHHHHHHhCCcEEEEccCCCCc
Q psy8974 32 KKIKVLSEWIDKAKHVVLHTGAGIST 57 (79)
Q Consensus 32 ~~~~~l~~~l~~s~~ivvltGAGiSt 57 (79)
+.++.+.+.|+++++|+ +.|+|-|.
T Consensus 59 ~~i~~i~~~l~~a~rI~-~~G~G~S~ 83 (306)
T 1nri_A 59 LAVEQIVQAFQQGGRLI-YIGAGTSG 83 (306)
T ss_dssp HHHHHHHHHHHTTCCEE-EEESHHHH
T ss_pred HHHHHHHHHHHcCCEEE-EEeccHhH
Confidence 44556667777777654 56999874
No 60
>2pgn_A Cyclohexane-1,2-dione hydrolase (CDH); three alpha/beta domains; HET: P6G FAD TPP; 1.20A {Azoarcus SP} PDB: 2pgo_A*
Probab=44.30 E-value=11 Score=28.97 Aligned_cols=25 Identities=20% Similarity=0.403 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHhCCcEEEEccCCCC
Q psy8974 32 KKIKVLSEWIDKAKHVVLHTGAGIS 56 (79)
Q Consensus 32 ~~~~~l~~~l~~s~~ivvltGAGiS 56 (79)
+.+++++++|.++++.+|+.|.|+.
T Consensus 193 ~~v~~~~~~l~~a~rpvIl~G~g~~ 217 (589)
T 2pgn_A 193 EDVREAAAQLVAAKNPVILAGGGVA 217 (589)
T ss_dssp HHHHHHHHHHHHCSSEEEEECHHHH
T ss_pred HHHHHHHHHHHhCCCeEEEECCCcc
Confidence 5688899999999999999998874
No 61
>1q6z_A BFD, BFDC, benzoylformate decarboxylase; lyase, carbon-carbon, mandelate catabolism, T thiazolone diphosphate, inhibitor, high resolution; HET: TZD; 1.00A {Pseudomonas putida} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1po7_A* 1pi3_A* 3fsj_X* 1mcz_A* 1bfd_A* 2fwn_A* 3fzn_A* 2fn3_A* 2v3w_A* 1yno_A* 3f6b_X* 3f6e_X*
Probab=44.19 E-value=10 Score=28.52 Aligned_cols=24 Identities=13% Similarity=0.358 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHhCCcEEEEccCCC
Q psy8974 32 KKIKVLSEWIDKAKHVVLHTGAGI 55 (79)
Q Consensus 32 ~~~~~l~~~l~~s~~ivvltGAGi 55 (79)
+.+++++++|+++++.+++.|.|+
T Consensus 188 ~~i~~~~~~l~~a~rpvil~G~g~ 211 (528)
T 1q6z_A 188 QDLDILVKALNSASNPAIVLGPDV 211 (528)
T ss_dssp HHHHHHHHHHHHCSSCEEEECHHH
T ss_pred HHHHHHHHHHhcCCCeEEEECCcc
Confidence 457888999999999999999985
No 62
>3lq1_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase; menaquinone biosynthesis, sephchc synthase, structural genomics; 2.60A {Listeria monocytogenes}
Probab=44.00 E-value=18 Score=27.68 Aligned_cols=26 Identities=19% Similarity=0.087 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHhCCcEEEEccCCCCc
Q psy8974 31 DKKIKVLSEWIDKAKHVVLHTGAGIST 57 (79)
Q Consensus 31 ~~~~~~l~~~l~~s~~ivvltGAGiSt 57 (79)
.+.+++++++|++ ++.||+.|.|+..
T Consensus 211 ~~~i~~~~~~L~~-~rPvIl~G~g~~~ 236 (578)
T 3lq1_A 211 DSSIQKMVTECTG-KKGVFVVGPIDKK 236 (578)
T ss_dssp HHHHHHHHHHTTT-SCEEEEECSCCCT
T ss_pred hHHHHHHHHHhcc-CCeEEEECCCCCh
Confidence 3568889999999 9999999999853
No 63
>3s4e_A Dual specificity protein phosphatase 19; PTP, protein tyrosine phosphatase, hydrolase; 1.26A {Homo sapiens}
Probab=43.99 E-value=53 Score=19.97 Aligned_cols=30 Identities=30% Similarity=0.444 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHHhCCcEEEEccCCCCccC
Q psy8974 30 FDKKIKVLSEWIDKAKHVVLHTGAGISTSA 59 (79)
Q Consensus 30 ~~~~~~~l~~~l~~s~~ivvltGAGiSt~s 59 (79)
+.+.++-+.+.++..+.++|.+-||+|.++
T Consensus 67 ~~~~~~fi~~~~~~~~~VlVHC~~G~sRS~ 96 (144)
T 3s4e_A 67 FPECFEFIEEAKRKDGVVLVHSNAGVSRAA 96 (144)
T ss_dssp HHHHHHHHHHHHHTTCCEEEECSSSSSHHH
T ss_pred HHHHHHHHHHHHHcCCeEEEEcCCCCchHH
Confidence 444444445555566799999999998654
No 64
>2xbl_A Phosphoheptose isomerase; capsule; HET: M7P PGE PG4; 1.62A {Burkholderia pseudomallei} PDB: 2x3y_A
Probab=43.95 E-value=25 Score=22.39 Aligned_cols=23 Identities=26% Similarity=0.229 Sum_probs=13.4
Q ss_pred HHHHHHHHHhCCcEEEEccCCCCc
Q psy8974 34 IKVLSEWIDKAKHVVLHTGAGIST 57 (79)
Q Consensus 34 ~~~l~~~l~~s~~ivvltGAGiSt 57 (79)
++.+++.+.++++| ++.|.|-|.
T Consensus 38 ~~~i~~~i~~~~~I-~i~G~G~S~ 60 (198)
T 2xbl_A 38 ADACIASIAQGGKV-LLAGNGGSA 60 (198)
T ss_dssp HHHHHHHHHTTCCE-EEECSTHHH
T ss_pred HHHHHHHHHcCCEE-EEEeCcHhh
Confidence 33344444667665 567888764
No 65
>2j16_A SDP-1, tyrosine-protein phosphatase YIL113W; hydrolase, hypothetical protein; 2.7A {Saccharomyces cerevisiae} PDB: 2j17_A* 2j16_B
Probab=43.49 E-value=18 Score=24.00 Aligned_cols=29 Identities=21% Similarity=0.375 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHhCCcEEEEccCCCCccC
Q psy8974 31 DKKIKVLSEWIDKAKHVVLHTGAGISTSA 59 (79)
Q Consensus 31 ~~~~~~l~~~l~~s~~ivvltGAGiSt~s 59 (79)
.+.++-+.+.++..++++|.+-||+|.++
T Consensus 104 ~~~~~fI~~~~~~g~~VLVHC~~G~sRS~ 132 (182)
T 2j16_A 104 PSLTSIIHAATTKREKILIHAQCGLSRSA 132 (182)
T ss_dssp HHHHHHHHHHHHTTCCEEEEESSCCSHHH
T ss_pred HHHHHHHHHHHhcCCeEEEECCCCCChHH
Confidence 33344444455566899999999998654
No 66
>3ezz_A Dual specificity protein phosphatase 4; alpha/beta, hydrolase, nucleus; 2.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1m3g_A
Probab=41.41 E-value=57 Score=19.67 Aligned_cols=30 Identities=33% Similarity=0.377 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHHHHhCCcEEEEccCCCCcc
Q psy8974 29 DFDKKIKVLSEWIDKAKHVVLHTGAGISTS 58 (79)
Q Consensus 29 ~~~~~~~~l~~~l~~s~~ivvltGAGiSt~ 58 (79)
.+.+-++-+.+.++..+.++|.+-||+|.+
T Consensus 66 ~~~~~~~~i~~~~~~~~~VlVHC~~G~~RS 95 (144)
T 3ezz_A 66 WFMEAIEYIDAVKDCRGRVLVHSQAGISRS 95 (144)
T ss_dssp THHHHHHHHHHHHHTTCCEEEEESSSSSHH
T ss_pred HHHHHHHHHHHHHhcCCeEEEECCCCCChh
Confidence 344444455555556689999999999854
No 67
>1m3s_A Hypothetical protein YCKF; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.95A {Bacillus subtilis} SCOP: c.80.1.3 PDB: 1viv_A
Probab=41.09 E-value=14 Score=23.50 Aligned_cols=24 Identities=25% Similarity=0.411 Sum_probs=18.2
Q ss_pred HHHHHHHHHHHhCCcEEEEccCCCC
Q psy8974 32 KKIKVLSEWIDKAKHVVLHTGAGIS 56 (79)
Q Consensus 32 ~~~~~l~~~l~~s~~ivvltGAGiS 56 (79)
+.+++++++|.++++|+ +.|.|-|
T Consensus 25 ~~i~~~~~~i~~a~~I~-i~G~G~S 48 (186)
T 1m3s_A 25 EEADQLADHILSSHQIF-TAGAGRS 48 (186)
T ss_dssp HHHHHHHHHHHHCSCEE-EECSHHH
T ss_pred HHHHHHHHHHHcCCeEE-EEecCHH
Confidence 46788889999998765 5677765
No 68
>2i2w_A Phosphoheptose isomerase; lipopolysaccharide biosynthesis; 1.95A {Escherichia coli} PDB: 2i22_A 1x94_A
Probab=40.93 E-value=25 Score=23.06 Aligned_cols=17 Identities=29% Similarity=0.358 Sum_probs=11.0
Q ss_pred HHhCCcEEEEccCCCCcc
Q psy8974 41 IDKAKHVVLHTGAGISTS 58 (79)
Q Consensus 41 l~~s~~ivvltGAGiSt~ 58 (79)
|.++++| ++.|.|-|..
T Consensus 61 l~~~~~I-~i~G~G~S~~ 77 (212)
T 2i2w_A 61 FKAGGKV-LSCGNGGSHC 77 (212)
T ss_dssp HHTTCCE-EEEESTHHHH
T ss_pred HHCCCEE-EEEeCCHHHH
Confidence 5666655 4678887653
No 69
>3nwy_A Uridylate kinase; allosterically activated form, AAK fold, UMP kinase, transfe; HET: GTP UDP; 2.54A {Mycobacterium tuberculosis}
Probab=40.56 E-value=36 Score=24.30 Aligned_cols=28 Identities=7% Similarity=0.252 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEEEccCC
Q psy8974 27 KEDFDKKIKVLSEWIDKAKHVVLHTGAG 54 (79)
Q Consensus 27 ~~~~~~~~~~l~~~l~~s~~ivvltGAG 54 (79)
++.+.+-.++++++.+.-..+|+++|+|
T Consensus 71 ~~~i~~la~~I~~l~~~G~~vviV~GgG 98 (281)
T 3nwy_A 71 PDVVAQVARQIADVVRGGVQIAVVIGGG 98 (281)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEEECCT
T ss_pred HHHHHHHHHHHHHHHHCCCeEEEEECCh
Confidence 3455555666666666667899999876
No 70
>1rxd_A Protein tyrosine phosphatase type IVA, member 1; protein tyrosine phosphatase IVA1...; structural genomics, NYSGXRC, unknown function, PSI; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1xm2_A 1zck_A 1r6h_A 1v3a_A
Probab=39.51 E-value=62 Score=19.47 Aligned_cols=31 Identities=13% Similarity=0.195 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHHHHHhC--CcEEEEccCCCCc
Q psy8974 27 KEDFDKKIKVLSEWIDKA--KHVVLHTGAGIST 57 (79)
Q Consensus 27 ~~~~~~~~~~l~~~l~~s--~~ivvltGAGiSt 57 (79)
...+.+-++.+.+.+... ..++|.+-||++.
T Consensus 77 ~~~~~~~~~~i~~~~~~~~~~~vlVHC~aG~~R 109 (159)
T 1rxd_A 77 NQIVDDWLSLVKIKFREEPGCCIAVHCVAGLGR 109 (159)
T ss_dssp HHHHHHHHHHHHHHHHHSTTCEEEEECSSSSTT
T ss_pred HHHHHHHHHHHHHHHHhCCCCeEEEECCCCCCH
Confidence 344455555555655543 6899999999984
No 71
>3r9t_A ECHA1_1; ssgcid, seattle structural genomics center for infectious DI enoyl-COA hydratase, lyase; 1.75A {Mycobacterium avium subsp} SCOP: c.14.1.0 PDB: 3r9s_A 3r0o_A
Probab=39.46 E-value=37 Score=23.55 Aligned_cols=33 Identities=27% Similarity=0.190 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHHHHHh--CCcEEEEccCCC-CccCC
Q psy8974 28 EDFDKKIKVLSEWIDK--AKHVVLHTGAGI-STSAG 60 (79)
Q Consensus 28 ~~~~~~~~~l~~~l~~--s~~ivvltGAGi-St~sG 60 (79)
.+|-..+.+..+.+.. .-++|||||+|= .=.+|
T Consensus 35 ~~~~~~L~~al~~~~~d~~vr~vVltg~g~~~F~aG 70 (267)
T 3r9t_A 35 AAVSIGVGDALEEAQHDPEVRAVVLTGAGDKSFCAG 70 (267)
T ss_dssp HHHHHHHHHHHHHHHHCTTCCEEEEEESSSSEEECC
T ss_pred HHHHHHHHHHHHHHHhCCCceEEEEECCCCCceeCC
Confidence 3444555554444443 347999999994 33344
No 72
>3ek6_A Uridylate kinase; UMPK unique GTP B site, allosteric regulation, ATP-binding, nucleotid binding, pyrimidine biosynthesis, transferase; 2.34A {Xanthomonas campestris PV} SCOP: c.73.1.0 PDB: 3ek5_A
Probab=37.96 E-value=45 Score=22.91 Aligned_cols=28 Identities=18% Similarity=0.215 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEEEccCC
Q psy8974 27 KEDFDKKIKVLSEWIDKAKHVVLHTGAG 54 (79)
Q Consensus 27 ~~~~~~~~~~l~~~l~~s~~ivvltGAG 54 (79)
++.+++-.++++++.+.-..+++++|+|
T Consensus 31 ~~~i~~la~~i~~l~~~G~~vviV~gGG 58 (243)
T 3ek6_A 31 PKVINRLAHEVIEAQQAGAQVALVIGGG 58 (243)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEEECST
T ss_pred HHHHHHHHHHHHHHHHCCCeEEEEECCC
Confidence 3455555566666666567788888876
No 73
>1jeo_A MJ1247, hypothetical protein MJ1247; RUMP pathway, phosphosugar, 3-hexulose-6-phosphate isomerase structural genomics; HET: CME CIT; 2.00A {Methanocaldococcus jannaschii} SCOP: c.80.1.3
Probab=37.49 E-value=16 Score=23.07 Aligned_cols=24 Identities=38% Similarity=0.433 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHhCCcEEEEccCCCC
Q psy8974 32 KKIKVLSEWIDKAKHVVLHTGAGIS 56 (79)
Q Consensus 32 ~~~~~l~~~l~~s~~ivvltGAGiS 56 (79)
+.+++++++|.++++|+ +.|.|-|
T Consensus 28 ~~i~~~~~~i~~a~~I~-i~G~G~S 51 (180)
T 1jeo_A 28 NKLDSLIDRIIKAKKIF-IFGVGRS 51 (180)
T ss_dssp HHHHHHHHHHHHCSSEE-EECCHHH
T ss_pred HHHHHHHHHHHhCCEEE-EEeecHH
Confidence 56888899999998765 5677765
No 74
>4fzw_C 1,2-epoxyphenylacetyl-COA isomerase; structural genomics, montreal-kingston bacterial structural initiative, BSGI, crotonase fold; 2.55A {Escherichia coli}
Probab=37.08 E-value=67 Score=22.32 Aligned_cols=33 Identities=21% Similarity=0.380 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHHHHhC--CcEEEEccCCCCccCC
Q psy8974 28 EDFDKKIKVLSEWIDKA--KHVVLHTGAGISTSAG 60 (79)
Q Consensus 28 ~~~~~~~~~l~~~l~~s--~~ivvltGAGiSt~sG 60 (79)
.+|-..+.+..+.+... =++|||||+|=.=.+|
T Consensus 41 ~~m~~~L~~al~~~~~d~~vr~vVltg~G~~FcaG 75 (274)
T 4fzw_C 41 DEMHAQLAECLKQVERDDTIRCLLLTGAGRGFCAG 75 (274)
T ss_dssp HHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCC
T ss_pred HHHHHHHHHHHHHHHhCCCceEEEEECCCCceeCC
Confidence 34555555555555443 3789999999665666
No 75
>3f81_A Dual specificity protein phosphatase 3; hydrolase, protein dual-specificity phosphatase, inhibitor; HET: STT; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1vhr_A* 1j4x_A*
Probab=36.96 E-value=78 Score=19.89 Aligned_cols=30 Identities=20% Similarity=0.392 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHHHh-CCcEEEEccCCCCcc
Q psy8974 29 DFDKKIKVLSEWIDK-AKHVVLHTGAGISTS 58 (79)
Q Consensus 29 ~~~~~~~~l~~~l~~-s~~ivvltGAGiSt~ 58 (79)
.+.+.++.+.+.++. .+.|+|.+-||+|.+
T Consensus 99 ~~~~~~~~i~~~~~~~~~~VlVHC~~G~~RS 129 (183)
T 3f81_A 99 YFERAADFIDQALAQKNGRVLVHCREGYSRS 129 (183)
T ss_dssp GHHHHHHHHHHHHHSTTCCEEEECSSSSSHH
T ss_pred HHHHHHHHHHHHHHcCCCeEEEECCCCcchH
Confidence 344445555556665 588999999999854
No 76
>3i47_A Enoyl COA hydratase/isomerase (crotonase); structural genomics; 1.58A {Legionella pneumophila subsp} SCOP: c.14.1.0
Probab=36.36 E-value=58 Score=22.57 Aligned_cols=33 Identities=15% Similarity=0.180 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHHHh--CCcEEEEccCCCCccCCC
Q psy8974 29 DFDKKIKVLSEWIDK--AKHVVLHTGAGISTSAGI 61 (79)
Q Consensus 29 ~~~~~~~~l~~~l~~--s~~ivvltGAGiSt~sGI 61 (79)
+|-+.+....+.+.. .=++|||||+|=.=.+|.
T Consensus 31 ~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~ 65 (268)
T 3i47_A 31 QLLTEMRIRLDSAINDTNVRVIVLKANGKHFSAGA 65 (268)
T ss_dssp HHHHHHHHHHHHHHHCTTCSEEEEEECSSCSBCSB
T ss_pred HHHHHHHHHHHHHHhCCCeEEEEEECCCCCeeCCC
Confidence 444455554444443 347999999996555653
No 77
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=36.12 E-value=25 Score=24.85 Aligned_cols=25 Identities=20% Similarity=0.490 Sum_probs=18.0
Q ss_pred HHHHHHHHHhC-CcEEEEccCCCCcc
Q psy8974 34 IKVLSEWIDKA-KHVVLHTGAGISTS 58 (79)
Q Consensus 34 ~~~l~~~l~~s-~~ivvltGAGiSt~ 58 (79)
+..|+++++.+ .+|.++.|+||..+
T Consensus 165 ~~~L~~Lv~~a~~ri~Im~GgGV~~~ 190 (224)
T 2bdq_A 165 IKHIKALVEYANNRIEIMVGGGVTAE 190 (224)
T ss_dssp HHHHHHHHHHHTTSSEEEECSSCCTT
T ss_pred HHHHHHHHHhhCCCeEEEeCCCCCHH
Confidence 44566666644 58999999999754
No 78
>1vim_A Hypothetical protein AF1796; structural genomics, unknown function; 1.36A {Archaeoglobus fulgidus} SCOP: c.80.1.3
Probab=35.81 E-value=19 Score=23.57 Aligned_cols=24 Identities=29% Similarity=0.454 Sum_probs=17.9
Q ss_pred HHHHHHHHHHHhCCcEEEEccCCCC
Q psy8974 32 KKIKVLSEWIDKAKHVVLHTGAGIS 56 (79)
Q Consensus 32 ~~~~~l~~~l~~s~~ivvltGAGiS 56 (79)
+.+++++++|.++++|+ +.|.|-|
T Consensus 35 ~~l~~~~~~i~~a~~I~-i~G~G~S 58 (200)
T 1vim_A 35 ETVGEMIKLIDSARSIF-VIGAGRS 58 (200)
T ss_dssp HHHHHHHHHHHHSSCEE-EECSHHH
T ss_pred HHHHHHHHHHhcCCEEE-EEEecHH
Confidence 45778888999988654 5677765
No 79
>2ywx_A Phosphoribosylaminoimidazole carboxylase catalyti; rossmann fold, structural genomics, NPPSFA; 2.31A {Methanocaldococcus jannaschii}
Probab=35.58 E-value=22 Score=24.00 Aligned_cols=24 Identities=21% Similarity=0.307 Sum_probs=17.6
Q ss_pred HHHHHHHHHhCCcEEEEccCCCCc
Q psy8974 34 IKVLSEWIDKAKHVVLHTGAGIST 57 (79)
Q Consensus 34 ~~~l~~~l~~s~~ivvltGAGiSt 57 (79)
.+++.++.++++.-|++++||++.
T Consensus 40 p~~~~~~~~~a~~~ViIa~AG~aa 63 (157)
T 2ywx_A 40 PELVEEIVKNSKADVFIAIAGLAA 63 (157)
T ss_dssp HHHHHHHHHHCCCSEEEEEEESSC
T ss_pred HHHHHHHHHhcCCCEEEEEcCchh
Confidence 345566777776688999999874
No 80
>1zzw_A Dual specificity protein phosphatase 10; MKP, PTP, hydrolase; 1.60A {Homo sapiens}
Probab=35.41 E-value=75 Score=19.25 Aligned_cols=28 Identities=25% Similarity=0.408 Sum_probs=18.6
Q ss_pred HHHHHHHHHHHHhCCcEEEEccCCCCcc
Q psy8974 31 DKKIKVLSEWIDKAKHVVLHTGAGISTS 58 (79)
Q Consensus 31 ~~~~~~l~~~l~~s~~ivvltGAGiSt~ 58 (79)
.+.++-+.+.+...+.++|.+.||+|..
T Consensus 70 ~~~~~~i~~~~~~~~~VlVHC~~G~~RS 97 (149)
T 1zzw_A 70 EEAFEFIEEAHQCGKGLLIHCQAGVSRS 97 (149)
T ss_dssp HHHHHHHHHHHHTTCEEEEECSSSSSHH
T ss_pred HHHHHHHHHHHHcCCeEEEECCCCCCHH
Confidence 3334444444455688999999999854
No 81
>2esb_A Dual specificity protein phosphatase 18; alpha/beta structure, hydrolase; HET: EPE; 2.00A {Homo sapiens}
Probab=35.25 E-value=56 Score=21.12 Aligned_cols=30 Identities=33% Similarity=0.381 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHHhCCcEEEEccCCCCccC
Q psy8974 30 FDKKIKVLSEWIDKAKHVVLHTGAGISTSA 59 (79)
Q Consensus 30 ~~~~~~~l~~~l~~s~~ivvltGAGiSt~s 59 (79)
+.+.++-+.+.+...+.++|.+-||+|.++
T Consensus 83 ~~~~~~fI~~~~~~~~~VLVHC~aG~sRS~ 112 (188)
T 2esb_A 83 FDPIADHIHSVEMKQGRTLLHCAAGVSRSA 112 (188)
T ss_dssp HHHHHHHHHHHHHTTCCEEEECSSSSSHHH
T ss_pred HHHHHHHHHHHHHcCCEEEEECCCCCchHH
Confidence 334444444555567899999999998543
No 82
>3s4o_A Protein tyrosine phosphatase-like protein; structural genomics, medical structural genomics of pathogen protozoa, MSGPP, unknown function; HET: MSE EPE; 2.30A {Leishmania major}
Probab=34.98 E-value=76 Score=19.21 Aligned_cols=15 Identities=20% Similarity=0.364 Sum_probs=12.5
Q ss_pred CCcEEEEccCCCCcc
Q psy8974 44 AKHVVLHTGAGISTS 58 (79)
Q Consensus 44 s~~ivvltGAGiSt~ 58 (79)
...++|.+-||++..
T Consensus 109 ~~~vlVHC~aG~~RT 123 (167)
T 3s4o_A 109 PPTIGVHCVAGLGRA 123 (167)
T ss_dssp CCEEEEECSSSSSHH
T ss_pred CCcEEEECCCCCCHH
Confidence 578999999999743
No 83
>2hcm_A Dual specificity protein phosphatase; structural genomics, PSI, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Mus musculus}
Probab=34.91 E-value=61 Score=20.13 Aligned_cols=29 Identities=14% Similarity=0.152 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHHhCCcEEEEccCCCCccC
Q psy8974 31 DKKIKVLSEWIDKAKHVVLHTGAGISTSA 59 (79)
Q Consensus 31 ~~~~~~l~~~l~~s~~ivvltGAGiSt~s 59 (79)
.+.++-+.+.++..+.++|.+-||+|...
T Consensus 76 ~~~~~~i~~~~~~~~~VlVHC~aG~~RSg 104 (164)
T 2hcm_A 76 EPTCAAMEAAVRDGGSCLVYCKNGRSRSA 104 (164)
T ss_dssp HHHHHHHHHHHHTTCEEEEEESSSSHHHH
T ss_pred HHHHHHHHHHHHcCCEEEEECCCCCchHH
Confidence 33344444445556889999999997543
No 84
>4a7w_A Uridylate kinase; transferase; HET: GTP; 1.80A {Helicobacter pylori} PDB: 4a7x_A*
Probab=34.33 E-value=55 Score=22.35 Aligned_cols=28 Identities=18% Similarity=0.265 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEEEccCC
Q psy8974 27 KEDFDKKIKVLSEWIDKAKHVVLHTGAG 54 (79)
Q Consensus 27 ~~~~~~~~~~l~~~l~~s~~ivvltGAG 54 (79)
++.++.-.++++++.+.-.++|++.|+|
T Consensus 29 ~~~i~~~a~~I~~l~~~G~~vvlV~gGG 56 (240)
T 4a7w_A 29 IHVLDHIAKEIKSLVENDIEVGIVIGGG 56 (240)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEEECCT
T ss_pred HHHHHHHHHHHHHHHHCCCcEEEEECCc
Confidence 4455555666666666667788888885
No 85
>3hrx_A Probable enoyl-COA hydratase; the spiral fold, the crotonase superfamily, lyase; 1.85A {Thermus thermophilus}
Probab=34.31 E-value=68 Score=21.78 Aligned_cols=33 Identities=24% Similarity=0.229 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHHHHh--CCcEEEEccCCCCccCC
Q psy8974 28 EDFDKKIKVLSEWIDK--AKHVVLHTGAGISTSAG 60 (79)
Q Consensus 28 ~~~~~~~~~l~~~l~~--s~~ivvltGAGiSt~sG 60 (79)
.+|-..+.+..+.+.. .=++||+||+|=.=.+|
T Consensus 26 ~~m~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG 60 (254)
T 3hrx_A 26 GELLDALYAALKEGEEDREVRALLLTGAGRAFSAG 60 (254)
T ss_dssp HHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCC
T ss_pred HHHHHHHHHHHHHHHhCCCeEEEEEeCCCCCcccC
Confidence 3454555554444443 34789999999877777
No 86
>3cm3_A Late protein H1, dual specificity protein phosphatase; dual-specificity phosphatase, VH1, hydrolase; 1.32A {Vaccinia virus} PDB: 2rf6_A 2p4d_A
Probab=34.10 E-value=88 Score=19.69 Aligned_cols=29 Identities=31% Similarity=0.525 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHhCCcEEEEccCCCCcc
Q psy8974 30 FDKKIKVLSEWIDKAKHVVLHTGAGISTS 58 (79)
Q Consensus 30 ~~~~~~~l~~~l~~s~~ivvltGAGiSt~ 58 (79)
+.+-++-+.+.+...+.++|.+-||+|.+
T Consensus 94 ~~~~~~~i~~~~~~~~~VlVHC~aG~~RS 122 (176)
T 3cm3_A 94 FDDVTAFLSKCDQRNEPVLVHSAAGVNRS 122 (176)
T ss_dssp HHHHHHHHHHHHHHTCCEEEECSSSSSHH
T ss_pred HHHHHHHHHHHHHCCCcEEEECCcCCCHH
Confidence 34444455555566789999999999843
No 87
>2a1f_A Uridylate kinase; PYRH, structural genomics, PSI, protein ST initiative, NEW YORK SGX research center for structural GEN nysgxrc; 2.10A {Haemophilus influenzae} SCOP: c.73.1.3 PDB: 2bne_A* 2bnf_A* 2v4y_A* 2bnd_A*
Probab=34.07 E-value=45 Score=22.64 Aligned_cols=29 Identities=17% Similarity=0.236 Sum_probs=18.2
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEEEccCCC
Q psy8974 27 KEDFDKKIKVLSEWIDKAKHVVLHTGAGI 55 (79)
Q Consensus 27 ~~~~~~~~~~l~~~l~~s~~ivvltGAGi 55 (79)
.+.+.+-++.++.+.+.-.++|++.|+|-
T Consensus 30 ~~~i~~~a~~I~~l~~~G~~vVlVhGgG~ 58 (247)
T 2a1f_A 30 PAILDRMAVEIKELVEMGVEVSVVLGGGN 58 (247)
T ss_dssp HHHHHHHHHHHHHHHTTTCEEEEEECCTT
T ss_pred HHHHHHHHHHHHHHHHCCCeEEEEECCCh
Confidence 34444555555555555567899998864
No 88
>3t89_A 1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase superfamily, lyase; 1.95A {Escherichia coli} PDB: 3t88_A 4elx_A 4elw_A 4els_A 3h02_A 2iex_A
Probab=33.99 E-value=50 Score=23.29 Aligned_cols=32 Identities=22% Similarity=0.076 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHHHHh--CCcEEEEccCCC-CccCC
Q psy8974 29 DFDKKIKVLSEWIDK--AKHVVLHTGAGI-STSAG 60 (79)
Q Consensus 29 ~~~~~~~~l~~~l~~--s~~ivvltGAGi-St~sG 60 (79)
+|-+.+.+..+.+.. .-++|||||+|= .=.+|
T Consensus 55 ~~~~~L~~al~~~~~d~~vr~vVltg~G~~~FcaG 89 (289)
T 3t89_A 55 LTVKEMIQALADARYDDNIGVIILTGAGDKAFCSG 89 (289)
T ss_dssp HHHHHHHHHHHHHHHCTTCCEEEEEESSSSEEECC
T ss_pred HHHHHHHHHHHHHHhCCCceEEEEEcCCCCCccCC
Confidence 444444444444443 347999999984 33334
No 89
>3gkb_A Putative enoyl-COA hydratase; structural genomics, unknown function, PSI-2, protein struct initiative; 1.80A {Streptomyces avermitilis}
Probab=33.94 E-value=48 Score=23.36 Aligned_cols=37 Identities=5% Similarity=0.110 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHHHh--CCcEEEEccCC---CCccCCCCCCC
Q psy8974 29 DFDKKIKVLSEWIDK--AKHVVLHTGAG---ISTSAGIPDFS 65 (79)
Q Consensus 29 ~~~~~~~~l~~~l~~--s~~ivvltGAG---iSt~sGIPdfR 65 (79)
+|-+.+.+..+.+.. .=++|||||+| .|+-.-|..|.
T Consensus 35 ~~~~~L~~al~~~~~d~~vr~vVltg~g~~~FcaG~Dl~~~~ 76 (287)
T 3gkb_A 35 TMMRELRTVLTTLADDSSVRVIVFSSADPEFFLAHVDMRIGE 76 (287)
T ss_dssp HHHHHHHHHHHHHHTCTTCCEEEEEESSSSEEECCBCTTGGG
T ss_pred HHHHHHHHHHHHHHcCCCeeEEEEecCCCCceeCCcCHHHHh
Confidence 444444444444443 24799999998 24333355544
No 90
>2hxp_A Dual specificity protein phosphatase 9; human phosphatase, structural genomics, PSI-2, protein structure initiative; 1.83A {Homo sapiens} PDB: 3lj8_A 1mkp_A
Probab=33.62 E-value=58 Score=20.18 Aligned_cols=22 Identities=32% Similarity=0.415 Sum_probs=15.8
Q ss_pred HHHHHhCCcEEEEccCCCCccC
Q psy8974 38 SEWIDKAKHVVLHTGAGISTSA 59 (79)
Q Consensus 38 ~~~l~~s~~ivvltGAGiSt~s 59 (79)
.+.+++.+.++|.+-||+|.+.
T Consensus 79 ~~~~~~~~~VlVHC~~G~~RS~ 100 (155)
T 2hxp_A 79 DEALSQNCGVLVHSLAGVSRSV 100 (155)
T ss_dssp HHHHHTTCEEEEECSSSSSHHH
T ss_pred HHHHHcCCcEEEECCCCCchhH
Confidence 3344445789999999998543
No 91
>2r0b_A Serine/threonine/tyrosine-interacting protein; structural genomics, phosphatase, PSI-2, protein structure initiative; 1.60A {Homo sapiens}
Probab=33.39 E-value=82 Score=19.11 Aligned_cols=28 Identities=25% Similarity=0.337 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHHhCCcEEEEccCCCCcc
Q psy8974 31 DKKIKVLSEWIDKAKHVVLHTGAGISTS 58 (79)
Q Consensus 31 ~~~~~~l~~~l~~s~~ivvltGAGiSt~ 58 (79)
.+.++-+.+.++..+.++|.+.||+|.+
T Consensus 77 ~~~~~~i~~~~~~~~~vlvHC~aG~~RS 104 (154)
T 2r0b_A 77 PMTKEFIDGSLQMGGKVLVHGNAGISRS 104 (154)
T ss_dssp HHHHHHHHHHHHTTCCEEEECSSSSSHH
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCCChH
Confidence 3334444445556689999999999854
No 92
>3lao_A Enoyl-COA hydratase/isomerase; alpha-beta sandwich, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Pseudomonas aeruginosa}
Probab=33.26 E-value=74 Score=21.76 Aligned_cols=32 Identities=9% Similarity=0.094 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHHHHh--CCcEEEEccCCCCccCC
Q psy8974 29 DFDKKIKVLSEWIDK--AKHVVLHTGAGISTSAG 60 (79)
Q Consensus 29 ~~~~~~~~l~~~l~~--s~~ivvltGAGiSt~sG 60 (79)
+|-+.+.+..+.+.. .-++|||||+|=.=.+|
T Consensus 39 ~~~~~l~~al~~~~~d~~vr~vVltg~g~~F~aG 72 (258)
T 3lao_A 39 AMLADLALAMGEYERSEESRCAVLFAHGEHFTAG 72 (258)
T ss_dssp HHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCC
T ss_pred HHHHHHHHHHHHHhhCCCcEEEEEECCCCCeecC
Confidence 444445444444443 34799999998544444
No 93
>1wrm_A Dual specificity phosphatase 22; DSP, JNK, hydrolase; HET: MES; 1.50A {Homo sapiens}
Probab=33.26 E-value=75 Score=19.81 Aligned_cols=29 Identities=28% Similarity=0.383 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHHhCCcEEEEccCCCCccC
Q psy8974 31 DKKIKVLSEWIDKAKHVVLHTGAGISTSA 59 (79)
Q Consensus 31 ~~~~~~l~~~l~~s~~ivvltGAGiSt~s 59 (79)
.+.++-+.+.+...+.++|.+-||+|.+.
T Consensus 70 ~~~~~fi~~~~~~~~~VlVHC~aG~~RSg 98 (165)
T 1wrm_A 70 KESIKFIHECRLRGESCLVHCLAGVSRSV 98 (165)
T ss_dssp HHHHHHHHHHHHTTCEEEEECSSSSSHHH
T ss_pred HHHHHHHHHHHHCCCeEEEECCCCCChhH
Confidence 33344444445556899999999998543
No 94
>1z9d_A Uridylate kinase, UK, UMP kinase; structural genomics, protein structure initiative, NYSGXRC, PYRH, putative uridylate kinase, PSI; 2.80A {Streptococcus pyogenes} SCOP: c.73.1.3
Probab=33.19 E-value=46 Score=22.67 Aligned_cols=28 Identities=18% Similarity=0.176 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEEEccCC
Q psy8974 27 KEDFDKKIKVLSEWIDKAKHVVLHTGAG 54 (79)
Q Consensus 27 ~~~~~~~~~~l~~~l~~s~~ivvltGAG 54 (79)
.+.+..-++.++.+...-.++|++.|+|
T Consensus 29 ~~~~~~~a~~I~~l~~~G~~vVlVhGgG 56 (252)
T 1z9d_A 29 IPTVQAIAKEIAEVHVSGVQIALVIGGG 56 (252)
T ss_dssp HHHHHHHHHHHHHHHTTTCEEEEEECCT
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEEECCC
Confidence 3445555555666555556789999886
No 95
>3hp0_A Putative polyketide biosynthesis enoyl-COA hydratase homolog PKSH; polyketide synthase, enoyl COA hydratase,isomerase; 2.32A {Bacillus subtilis}
Probab=33.05 E-value=76 Score=21.99 Aligned_cols=31 Identities=13% Similarity=0.035 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHHHh-CCcEEEEccCCCCccCC
Q psy8974 30 FDKKIKVLSEWIDK-AKHVVLHTGAGISTSAG 60 (79)
Q Consensus 30 ~~~~~~~l~~~l~~-s~~ivvltGAGiSt~sG 60 (79)
|-..+.+..+.+.. .-++|||||+|=.=.+|
T Consensus 35 ~~~~L~~al~~~~~d~vr~vVltg~g~~F~aG 66 (267)
T 3hp0_A 35 LIEECLQVLNQCETSTVTVVVLEGLPEVFCFG 66 (267)
T ss_dssp HHHHHHHHHHHHHHSSCCEEEEECCSSCSBCC
T ss_pred HHHHHHHHHHHHhcCCCEEEEEECCCCceecC
Confidence 33334333333332 45799999998655555
No 96
>3gow_A PAAG, probable enoyl-COA hydratase; the spiral fold, the crotonase superfamily, lyase; 1.85A {Thermus thermophilus HB8} PDB: 3hrx_A
Probab=32.92 E-value=74 Score=21.71 Aligned_cols=32 Identities=25% Similarity=0.245 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHHHHh--CCcEEEEccCCCCccCC
Q psy8974 29 DFDKKIKVLSEWIDK--AKHVVLHTGAGISTSAG 60 (79)
Q Consensus 29 ~~~~~~~~l~~~l~~--s~~ivvltGAGiSt~sG 60 (79)
+|-..+.+..+.+.. .-++|||||+|=.=.+|
T Consensus 27 ~~~~~l~~al~~~~~d~~vr~vVltg~g~~F~aG 60 (254)
T 3gow_A 27 ELLDALYAALKEGEEDREVRALLLTGAGRAFSAG 60 (254)
T ss_dssp HHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCC
T ss_pred HHHHHHHHHHHHHhcCCCeEEEEEECCCCcccCC
Confidence 444455554444443 34789999998655555
No 97
>2a3n_A Putative glucosamine-fructose-6-phosphate aminotr; structural genomics, joint center for structural genomics; HET: MSE; 1.23A {Salmonella typhimurium}
Probab=32.46 E-value=38 Score=24.26 Aligned_cols=26 Identities=15% Similarity=0.159 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHh--CCcEEEEccCCCCcc
Q psy8974 32 KKIKVLSEWIDK--AKHVVLHTGAGISTS 58 (79)
Q Consensus 32 ~~~~~l~~~l~~--s~~ivvltGAGiSt~ 58 (79)
+.++++++.|.+ +++|+ +.|.|-|..
T Consensus 40 ~~i~~~~~~i~~~~~~~I~-i~G~G~S~~ 67 (355)
T 2a3n_A 40 QKAEQVADEIYQAGFSSLF-FASVGGSLA 67 (355)
T ss_dssp HHHHHHHHHHHHHCCSCEE-EEECGGGHH
T ss_pred HHHHHHHHHHHhCCCCEEE-EEEccHHHH
Confidence 457778888887 77665 679998743
No 98
>3t8b_A 1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase superfamily, lyase; 1.65A {Mycobacterium tuberculosis} PDB: 3t8a_A 1rjm_A* 1rjn_A* 1q52_A 1q51_A
Probab=32.41 E-value=52 Score=23.92 Aligned_cols=27 Identities=22% Similarity=0.164 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHHHHh--CCcEEEEccCCC
Q psy8974 29 DFDKKIKVLSEWIDK--AKHVVLHTGAGI 55 (79)
Q Consensus 29 ~~~~~~~~l~~~l~~--s~~ivvltGAGi 55 (79)
+|-..+.+..+.+.. .=++|||||+|=
T Consensus 84 ~~~~eL~~al~~~~~d~~vrvVVltG~G~ 112 (334)
T 3t8b_A 84 HTVDELYRVLDHARMSPDVGVVLLTGNGP 112 (334)
T ss_dssp HHHHHHHHHHHHHHHCTTCCEEEEEECCC
T ss_pred HHHHHHHHHHHHHHhCCCceEEEEeCCCC
Confidence 344444444444443 347999999994
No 99
>3fdu_A Putative enoyl-COA hydratase/isomerase; structural genomics, PSI-2; 2.00A {Acinetobacter baumannii}
Probab=32.14 E-value=78 Score=21.84 Aligned_cols=32 Identities=25% Similarity=0.196 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHHHHh--CCcEEEEccCCCCccCC
Q psy8974 29 DFDKKIKVLSEWIDK--AKHVVLHTGAGISTSAG 60 (79)
Q Consensus 29 ~~~~~~~~l~~~l~~--s~~ivvltGAGiSt~sG 60 (79)
+|-+.+.+..+.+.. .-++|||||+|=.=.+|
T Consensus 32 ~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG 65 (266)
T 3fdu_A 32 ELYLWIAKALDEADQNKDVRVVVLRGAEHDFTAG 65 (266)
T ss_dssp HHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCC
T ss_pred HHHHHHHHHHHHHHhCCCcEEEEEECCCCCeECC
Confidence 444555554444443 34789999998555555
No 100
>3bpt_A 3-hydroxyisobutyryl-COA hydrolase; coenzyme A, beta-hydroxyisobutyryl acid, querceti structural genomics consortium, SGC; HET: QUE; 1.50A {Homo sapiens}
Probab=31.91 E-value=53 Score=23.92 Aligned_cols=26 Identities=15% Similarity=0.283 Sum_probs=16.1
Q ss_pred HHHHHHHHHHHHHHh--CCcEEEEccCC
Q psy8974 29 DFDKKIKVLSEWIDK--AKHVVLHTGAG 54 (79)
Q Consensus 29 ~~~~~~~~l~~~l~~--s~~ivvltGAG 54 (79)
+|-..+....+.+.. .-++|||||+|
T Consensus 33 ~m~~~L~~al~~~~~d~~vr~vVltG~g 60 (363)
T 3bpt_A 33 NMIRQIYPQLKKWEQDPETFLIIIKGAG 60 (363)
T ss_dssp HHHHHHHHHHHHHHHCTTCCEEEEEETT
T ss_pred HHHHHHHHHHHHHHhCCCeEEEEEECCC
Confidence 444455444444443 34799999998
No 101
>1ns5_A Hypothetical protein YBEA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 1.68A {Escherichia coli} SCOP: c.116.1.3
Probab=31.85 E-value=41 Score=22.23 Aligned_cols=13 Identities=8% Similarity=-0.026 Sum_probs=10.1
Q ss_pred hhhccCCCCCCCC
Q psy8974 4 NYAEGLSPYENKG 16 (79)
Q Consensus 4 ~ya~~ls~~~~kg 16 (79)
-|++||++|..-.
T Consensus 22 eY~kRl~~~~~~e 34 (155)
T 1ns5_A 22 EYLRRFPKDMPFE 34 (155)
T ss_dssp HHHTTSCTTSCEE
T ss_pred HHHHHcCccCCce
Confidence 5999999986543
No 102
>1fpz_A Cyclin-dependent kinase inhibitor 3; alpha-beta sandwich, hydrolase; 2.00A {Homo sapiens} SCOP: c.45.1.1 PDB: 1fq1_A*
Probab=31.66 E-value=94 Score=20.20 Aligned_cols=29 Identities=10% Similarity=0.291 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHHHHhCCcEEEEccCCCCc
Q psy8974 29 DFDKKIKVLSEWIDKAKHVVLHTGAGIST 57 (79)
Q Consensus 29 ~~~~~~~~l~~~l~~s~~ivvltGAGiSt 57 (79)
.+.+-++.+.+.+...+.++|.+-||++.
T Consensus 118 ~~~~~~~~i~~~~~~~~~VlVHC~aG~gR 146 (212)
T 1fpz_A 118 SCCEIMEELTTCLKNYRKTLIHSYGGLGR 146 (212)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEECSSSSSH
T ss_pred HHHHHHHHHHHHHhCCCCEEEECCCCCCH
Confidence 34444555555555667899999999973
No 103
>3swx_A Probable enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium abscessus}
Probab=31.47 E-value=80 Score=21.67 Aligned_cols=33 Identities=12% Similarity=0.127 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHHHHHh--CCcEEEEccCCCCccCC
Q psy8974 28 EDFDKKIKVLSEWIDK--AKHVVLHTGAGISTSAG 60 (79)
Q Consensus 28 ~~~~~~~~~l~~~l~~--s~~ivvltGAGiSt~sG 60 (79)
.+|-..+.+..+.+.. .-++|||||+|=.=.+|
T Consensus 35 ~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG 69 (265)
T 3swx_A 35 KTMLEELALALGEYETDTDLRAAVLYGEGPLFTAG 69 (265)
T ss_dssp HHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCC
T ss_pred HHHHHHHHHHHHHHhhCCCceEEEEECCCCCcccC
Confidence 3444555554444543 34789999998544444
No 104
>1ybd_A Uridylate kinase; alpha/beta/alpha fold, hexamer, structural genomics, structure initiative, PSI; 2.60A {Neisseria meningitidis} SCOP: c.73.1.3
Probab=31.34 E-value=52 Score=21.95 Aligned_cols=28 Identities=14% Similarity=0.297 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEEEccCC
Q psy8974 27 KEDFDKKIKVLSEWIDKAKHVVLHTGAG 54 (79)
Q Consensus 27 ~~~~~~~~~~l~~~l~~s~~ivvltGAG 54 (79)
.+.+.+-++.++++.+.-.++|++.|+|
T Consensus 29 ~~~~~~~~~~i~~l~~~g~~vviV~GgG 56 (239)
T 1ybd_A 29 HDTIVQTVGEIAEVVKMGVQVGIVVGGG 56 (239)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEEECCH
T ss_pred HHHHHHHHHHHHHHHHCCCeEEEEECCc
Confidence 3445555556666655557889899885
No 105
>2j5g_A ALR4455 protein; enzyme evolution, C-C bond hydrolase, hydrolase, lyase, crotonase, biocatalysis, beta-diketone; 1.46A {Anabaena SP} PDB: 2j5s_A* 2j5g_D
Probab=30.83 E-value=64 Score=22.37 Aligned_cols=27 Identities=22% Similarity=0.214 Sum_probs=15.8
Q ss_pred HHHHHHHHHHHHHHh--CCcEEEEccCCC
Q psy8974 29 DFDKKIKVLSEWIDK--AKHVVLHTGAGI 55 (79)
Q Consensus 29 ~~~~~~~~l~~~l~~--s~~ivvltGAGi 55 (79)
+|-..+.+..+.+.. .-++|||||+|=
T Consensus 51 ~~~~~L~~al~~~~~d~~vr~vVltg~g~ 79 (263)
T 2j5g_A 51 KTHREFPDAFYDISRDRDNRVVILTGSGD 79 (263)
T ss_dssp HHHHHHHHHHHHHHHCTTCCEEEEECBTT
T ss_pred HHHHHHHHHHHHHHhCCCcEEEEEECCCC
Confidence 344444444444433 347999999983
No 106
>3t3w_A Enoyl-COA hydratase; ssgcid, structural genomics, seattle ST genomics center for infectious disease, lyase; 1.80A {Mycobacterium thermoresistibile} PDB: 3ome_A
Probab=30.18 E-value=86 Score=21.77 Aligned_cols=33 Identities=15% Similarity=0.154 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHHHh--CCcEEEEccCCCCccCCC
Q psy8974 29 DFDKKIKVLSEWIDK--AKHVVLHTGAGISTSAGI 61 (79)
Q Consensus 29 ~~~~~~~~l~~~l~~--s~~ivvltGAGiSt~sGI 61 (79)
+|-+.+.+..+.+.. .-++|||||+|=.=.+|.
T Consensus 47 ~~~~~L~~al~~~~~d~~vr~vVltg~G~~F~aG~ 81 (279)
T 3t3w_A 47 ELLDELDAAWTRAAEDNDVSVIVLRANGKHFSAGH 81 (279)
T ss_dssp HHHHHHHHHHHHHHHCTTCCEEEEEECSSCSBCCB
T ss_pred HHHHHHHHHHHHHhcCCCeEEEEEECCCCceeecc
Confidence 444455554444443 347999999996556663
No 107
>1yz4_A DUSP15, dual specificity phosphatase-like 15 isoform A; hydrolase; HET: BOG; 2.40A {Homo sapiens}
Probab=30.11 E-value=99 Score=19.03 Aligned_cols=29 Identities=24% Similarity=0.244 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHHhCCcEEEEccCCCCccC
Q psy8974 31 DKKIKVLSEWIDKAKHVVLHTGAGISTSA 59 (79)
Q Consensus 31 ~~~~~~l~~~l~~s~~ivvltGAGiSt~s 59 (79)
.+.++-+.+.+...+.++|.+-||+|.+.
T Consensus 71 ~~~~~~i~~~~~~~~~VlVHC~aG~~RSg 99 (160)
T 1yz4_A 71 KECINFIHCCRLNGGNCLVHSFAGISRST 99 (160)
T ss_dssp HHHHHHHHHHHHTTCCEEEEETTSSSHHH
T ss_pred HHHHHHHHHHHHcCCeEEEECCCCCchHH
Confidence 33344444445556889999999998543
No 108
>3pea_A Enoyl-COA hydratase/isomerase family protein; structural genomics, center for structural genomics of infec diseases, csgid; HET: FLC PG4; 1.82A {Bacillus anthracis}
Probab=29.80 E-value=88 Score=21.43 Aligned_cols=33 Identities=27% Similarity=0.336 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHHHHh--CCcEEEEccCCCCccCC
Q psy8974 28 EDFDKKIKVLSEWIDK--AKHVVLHTGAGISTSAG 60 (79)
Q Consensus 28 ~~~~~~~~~l~~~l~~--s~~ivvltGAGiSt~sG 60 (79)
.+|-..+.+..+.+.. .-++|||||+|=.=.+|
T Consensus 31 ~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG 65 (261)
T 3pea_A 31 SQVMHDVTELIDQVEKDDNIRVVVIHGEGRFFSAG 65 (261)
T ss_dssp HHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCC
T ss_pred HHHHHHHHHHHHHHHhCCCceEEEEECCCCceeCC
Confidence 3444555554444443 35799999998655555
No 109
>2g6z_A Dual specificity protein phosphatase 5; alpha/beta, hydrolase; 2.70A {Homo sapiens}
Probab=29.49 E-value=87 Score=21.08 Aligned_cols=31 Identities=32% Similarity=0.497 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHHHHhCCcEEEEccCCCCccC
Q psy8974 29 DFDKKIKVLSEWIDKAKHVVLHTGAGISTSA 59 (79)
Q Consensus 29 ~~~~~~~~l~~~l~~s~~ivvltGAGiSt~s 59 (79)
.+.+.++.+.+.++..+.++|.+-||+|.+.
T Consensus 68 ~~~~~~~fI~~~~~~~~~VLVHC~aG~sRSg 98 (211)
T 2g6z_A 68 HFQEAIDFIDCVREKGGKVLVHSEAGISRSP 98 (211)
T ss_dssp GHHHHHHHHHHHHHTTCCEEEEESSSSSHHH
T ss_pred HHHHHHHHHHHHHhcCCeEEEECCCCCCcHH
Confidence 3444454455555567899999999998543
No 110
>3qxi_A Enoyl-COA hydratase ECHA1; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 2.20A {Mycobacterium marinum}
Probab=29.45 E-value=88 Score=21.53 Aligned_cols=32 Identities=28% Similarity=0.310 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHHHHh--CCcEEEEccCCCCccCC
Q psy8974 29 DFDKKIKVLSEWIDK--AKHVVLHTGAGISTSAG 60 (79)
Q Consensus 29 ~~~~~~~~l~~~l~~--s~~ivvltGAGiSt~sG 60 (79)
+|-..+.+..+.+.. .-++|||||+|=.=.+|
T Consensus 42 ~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG 75 (265)
T 3qxi_A 42 AVSRALADAMDRLDADAGLSVGILTGAGGSFCAG 75 (265)
T ss_dssp HHHHHHHHHHHHHHHCTTCCEEEEEESTTCCCCS
T ss_pred HHHHHHHHHHHHHHhCCCcEEEEEECCCCCeeCC
Confidence 444444444444443 34799999999655555
No 111
>3q4g_A NH(3)-dependent NAD(+) synthetase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; 2.40A {Vibrio cholerae} SCOP: c.26.2.0
Probab=29.12 E-value=32 Score=24.57 Aligned_cols=32 Identities=16% Similarity=0.419 Sum_probs=23.9
Q ss_pred CCCCccCCCHHHHHHHHHHHHHHHHhC--CcEEE
Q psy8974 18 LGLAETFDSKEDFDKKIKVLSEWIDKA--KHVVL 49 (79)
Q Consensus 18 ~g~~e~~d~~~~~~~~~~~l~~~l~~s--~~ivv 49 (79)
||....+|+.++.+..+..|.+.++++ +.+||
T Consensus 12 ~~~~~~~~~~~~i~~~v~~L~d~l~~~g~~~vvv 45 (279)
T 3q4g_A 12 MRVLPSIDPQFEIERRVAFIKRKLTEARYKSLVL 45 (279)
T ss_dssp HTCCSSCCHHHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred HCCCCCCCHHHHHHHHHHHHHHHHHHcCCCCEEE
Confidence 455556788888888888999999876 45555
No 112
>3u61_B DNA polymerase accessory protein 44; AAA+, ATP hydrolase, clamp loader, sliding clamp, primer-TEM DNA, DNA binding protein-DNA complex; HET: DNA ADP 08T; 3.20A {Enterobacteria phage T4} PDB: 3u5z_B* 3u60_B*
Probab=28.99 E-value=43 Score=22.86 Aligned_cols=25 Identities=20% Similarity=0.383 Sum_probs=17.9
Q ss_pred HHHHHHHHHHHhC--CcEEEEcc-CCCC
Q psy8974 32 KKIKVLSEWIDKA--KHVVLHTG-AGIS 56 (79)
Q Consensus 32 ~~~~~l~~~l~~s--~~ivvltG-AGiS 56 (79)
+.++.+.++++.. .++++++| .|..
T Consensus 33 ~~~~~l~~~l~~~~~~~~~L~~G~~G~G 60 (324)
T 3u61_B 33 FDKETFKSITSKGKIPHIILHSPSPGTG 60 (324)
T ss_dssp HHHHHHHHHHHTTCCCSEEEECSSTTSS
T ss_pred HHHHHHHHHHHcCCCCeEEEeeCcCCCC
Confidence 4466777788754 37889998 7764
No 113
>3myb_A Enoyl-COA hydratase; ssgcid, struct genomics, seattle structural genomics center for infectious lyase; 1.55A {Mycobacterium smegmatis}
Probab=28.81 E-value=88 Score=21.88 Aligned_cols=32 Identities=13% Similarity=0.104 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHHHHh--CCcEEEEccCCCCccCC
Q psy8974 29 DFDKKIKVLSEWIDK--AKHVVLHTGAGISTSAG 60 (79)
Q Consensus 29 ~~~~~~~~l~~~l~~--s~~ivvltGAGiSt~sG 60 (79)
+|-..+.+..+.+.. .-++|||||+|=.=.+|
T Consensus 53 ~~~~~L~~al~~~~~d~~vr~vVltg~G~~F~aG 86 (286)
T 3myb_A 53 AMLAALGEAFGTLAEDESVRAVVLAASGKAFCAG 86 (286)
T ss_dssp HHHHHHHHHHHHHHTCTTCCEEEEEECSSCSBCC
T ss_pred HHHHHHHHHHHHHHhCCCeEEEEEECCCCCccCC
Confidence 344444444444443 34799999999655555
No 114
>2oud_A Dual specificity protein phosphatase 10; A central five-stranded B-sheet, hydrolase; 2.80A {Homo sapiens}
Probab=28.72 E-value=1.1e+02 Score=19.28 Aligned_cols=29 Identities=28% Similarity=0.422 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHHhCCcEEEEccCCCCccC
Q psy8974 31 DKKIKVLSEWIDKAKHVVLHTGAGISTSA 59 (79)
Q Consensus 31 ~~~~~~l~~~l~~s~~ivvltGAGiSt~s 59 (79)
.+.++.+.+.+...+.++|.+-||+|.+.
T Consensus 74 ~~~~~~i~~~~~~~~~VlVHC~aG~~RSg 102 (177)
T 2oud_A 74 EEAFEFIEEAHQCGKGLLIHCQAGVSRSA 102 (177)
T ss_dssp HHHHHHHHHHHHTTCEEEEECSSSSSHHH
T ss_pred HHHHHHHHHHHhcCCcEEEEcCCCCCchH
Confidence 33344444445556889999999998543
No 115
>3oc7_A Enoyl-COA hydratase; seattle structural genomics center for infectious disease, S non-pathogenic mycobacterium species, ortholog; 1.50A {Mycobacterium avium} SCOP: c.14.1.0
Probab=28.65 E-value=67 Score=22.03 Aligned_cols=32 Identities=16% Similarity=0.069 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHHHHhC--CcEEEEccCCCCccCC
Q psy8974 29 DFDKKIKVLSEWIDKA--KHVVLHTGAGISTSAG 60 (79)
Q Consensus 29 ~~~~~~~~l~~~l~~s--~~ivvltGAGiSt~sG 60 (79)
+|-+.+.+..+.+... -++|||||+|=.=.+|
T Consensus 38 ~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG 71 (267)
T 3oc7_A 38 ALVSQLHQGLRDASSDPAVRVVVLAHTGGTFCAG 71 (267)
T ss_dssp HHHHHHHHHHHHHHHCTTCCEEEEEECSSEEECC
T ss_pred HHHHHHHHHHHHHhcCCCceEEEEECCCCceeCC
Confidence 4444454444444433 4799999998544555
No 116
>1nzy_A Dehalogenase, 4-chlorobenzoyl coenzyme A dehalogenase; lyase; HET: BCA; 1.80A {Pseudomonas SP} SCOP: c.14.1.3 PDB: 1jxz_A* 1nzy_B*
Probab=28.59 E-value=95 Score=21.26 Aligned_cols=32 Identities=19% Similarity=0.151 Sum_probs=18.5
Q ss_pred HHHHHHHHHHHHHHh--CCcEEEEccCCCCccCC
Q psy8974 29 DFDKKIKVLSEWIDK--AKHVVLHTGAGISTSAG 60 (79)
Q Consensus 29 ~~~~~~~~l~~~l~~--s~~ivvltGAGiSt~sG 60 (79)
+|-+.+.+..+.+.. .-++|||||+|=.=.+|
T Consensus 30 ~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG 63 (269)
T 1nzy_A 30 KAMQEVTDALNRAEEDDSVGAVMITGAEDAFCAG 63 (269)
T ss_dssp HHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCC
T ss_pred HHHHHHHHHHHHHhhCCCeeEEEEECCCCCcccC
Confidence 444444444444443 34899999998444444
No 117
>3rsi_A Putative enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Mycobacterium abscessus}
Probab=28.32 E-value=80 Score=21.65 Aligned_cols=32 Identities=22% Similarity=0.302 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHHHHh--CCcEEEEccCCCCccCC
Q psy8974 29 DFDKKIKVLSEWIDK--AKHVVLHTGAGISTSAG 60 (79)
Q Consensus 29 ~~~~~~~~l~~~l~~--s~~ivvltGAGiSt~sG 60 (79)
+|-+.+.+..+.+.. .=++|||||+|=.=.+|
T Consensus 36 ~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG 69 (265)
T 3rsi_A 36 NMVSQFAAAWDEIDHDDGIRAAILTGAGSAYCVG 69 (265)
T ss_dssp HHHHHHHHHHHHHHHCTTCCEEEEEESTTCSEEC
T ss_pred HHHHHHHHHHHHHHhCCCceEEEEECCCCCcccC
Confidence 444444444444443 34789999998555555
No 118
>2jjx_A Uridylate kinase, UMP kinase; structural genomics, pyrimidine biosynthesis, ATP-binding, nucleotide-binding, OPPF, PYRH, cytoplasm; HET: ATP; 2.82A {Bacillus anthracis}
Probab=28.31 E-value=64 Score=22.04 Aligned_cols=29 Identities=14% Similarity=0.225 Sum_probs=17.7
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEEEccCCC
Q psy8974 27 KEDFDKKIKVLSEWIDKAKHVVLHTGAGI 55 (79)
Q Consensus 27 ~~~~~~~~~~l~~~l~~s~~ivvltGAGi 55 (79)
.+.+..-++.++++.+.-.++|++.|+|-
T Consensus 34 ~~~i~~~a~~I~~l~~~G~~vViV~GgG~ 62 (255)
T 2jjx_A 34 SKRLEHIANEILSIVDLGIEVSIVIGGGN 62 (255)
T ss_dssp HHHHHHHHHHHHHHHTTTCEEEEEECCTT
T ss_pred HHHHHHHHHHHHHHHHCCCeEEEEECchH
Confidence 34444545555555544567888888863
No 119
>3lke_A Enoyl-COA hydratase; nysgrc, target 112 structural genomics, PSI-2, protein structure initiative; 1.70A {Bacillus halodurans}
Probab=28.22 E-value=74 Score=21.86 Aligned_cols=32 Identities=9% Similarity=0.100 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHHHHh--CCcEEEEccCCCCc-cCC
Q psy8974 29 DFDKKIKVLSEWIDK--AKHVVLHTGAGIST-SAG 60 (79)
Q Consensus 29 ~~~~~~~~l~~~l~~--s~~ivvltGAGiSt-~sG 60 (79)
+|-+.+.+..+.+.. .=++|||||+|=.= .+|
T Consensus 31 ~~~~~L~~al~~~~~d~~vr~vVltg~g~~FF~aG 65 (263)
T 3lke_A 31 ELGTSLLEAIRAGNNETSIHSIILQSKHRAYFSSG 65 (263)
T ss_dssp HHHHHHHHHHHHHHHCSSCCEEEEEESCTTEEECB
T ss_pred HHHHHHHHHHHHHhcCCCeEEEEEEcCCCceEecC
Confidence 444445444444443 34789999998544 444
No 120
>2fbm_A Y chromosome chromodomain protein 1, telomeric IS; acetyltransferase, structural genomics, structural genomics consortium, SGC, unknown function; 2.28A {Homo sapiens} SCOP: c.14.1.3
Probab=28.21 E-value=1e+02 Score=21.69 Aligned_cols=32 Identities=22% Similarity=0.209 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHHHH-hCCcEEEEccCCCCccCC
Q psy8974 29 DFDKKIKVLSEWID-KAKHVVLHTGAGISTSAG 60 (79)
Q Consensus 29 ~~~~~~~~l~~~l~-~s~~ivvltGAGiSt~sG 60 (79)
+|-..+....+.+. +..++|||||+|=.=.+|
T Consensus 51 ~m~~~L~~al~~~~~d~~r~vVltg~G~~FcaG 83 (291)
T 2fbm_A 51 EVIKEIVNALNSAAADDSKLVLFSAAGSVFCCG 83 (291)
T ss_dssp HHHHHHHHHHHHHHHSSCSEEEEEECSSCSBCC
T ss_pred HHHHHHHHHHHHHhcCCCeEEEEECCCCCccCC
Confidence 34444444333333 234899999998544454
No 121
>2ej5_A Enoyl-COA hydratase subunit II; structural genomics, GK2038, NPPSFA, national project on prote structural and functional analyses; 2.00A {Geobacillus kaustophilus}
Probab=27.97 E-value=1e+02 Score=20.94 Aligned_cols=32 Identities=22% Similarity=0.277 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHHHHh--CCcEEEEccCCCCccCC
Q psy8974 29 DFDKKIKVLSEWIDK--AKHVVLHTGAGISTSAG 60 (79)
Q Consensus 29 ~~~~~~~~l~~~l~~--s~~ivvltGAGiSt~sG 60 (79)
+|-+.+.+..+.+.. .-++|||||+|=.=.+|
T Consensus 30 ~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG 63 (257)
T 2ej5_A 30 QMNAEVTKALKQAGADPNVRCVVITGAGRAFCAG 63 (257)
T ss_dssp HHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCC
T ss_pred HHHHHHHHHHHHHhhCCCeEEEEEECCCCCccCC
Confidence 444444444444443 34799999998443444
No 122
>2nt2_A Protein phosphatase slingshot homolog 2; alpha/beta hydrolase; 2.10A {Homo sapiens}
Probab=27.68 E-value=1e+02 Score=18.52 Aligned_cols=29 Identities=24% Similarity=0.390 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHHhCCcEEEEccCCCCccC
Q psy8974 31 DKKIKVLSEWIDKAKHVVLHTGAGISTSA 59 (79)
Q Consensus 31 ~~~~~~l~~~l~~s~~ivvltGAGiSt~s 59 (79)
.+.++-+.+.++..+.++|.+-||+|.+.
T Consensus 68 ~~~~~fi~~~~~~~~~VlVHC~~G~~RS~ 96 (145)
T 2nt2_A 68 NDTYKFISKAKKHGSKCLVHSKMGVSRSA 96 (145)
T ss_dssp HHHHHHHHHHHHTTCEEEEECSSSSSHHH
T ss_pred HHHHHHHHHHHHcCCeEEEECCCCCchHH
Confidence 33344444445556889999999998654
No 123
>3l3s_A Enoyl-COA hydratase/isomerase family protein; crotonase superfamily, dimer of trimers, PSI-2, NYSGXRC, structural genomics; 2.32A {Ruegeria pomeroyi}
Probab=27.67 E-value=79 Score=21.72 Aligned_cols=33 Identities=18% Similarity=0.132 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHHHHhC--CcEEEEccCCCCccCC
Q psy8974 28 EDFDKKIKVLSEWIDKA--KHVVLHTGAGISTSAG 60 (79)
Q Consensus 28 ~~~~~~~~~l~~~l~~s--~~ivvltGAGiSt~sG 60 (79)
.+|-+.+....+.+... -++|||||+|=.=.+|
T Consensus 32 ~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG 66 (263)
T 3l3s_A 32 RAMIAALHDALRRAMGDDHVHVLVIHGPGRIFCAG 66 (263)
T ss_dssp HHHHHHHHHHHHHHHTCTTCCEEEEECCSSEEECC
T ss_pred HHHHHHHHHHHHHHHhCCCceEEEEECCCCCccCC
Confidence 34445555544445433 3799999998544444
No 124
>3g64_A Putative enoyl-COA hydratase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; 2.05A {Streptomyces coelicolor A3}
Probab=27.56 E-value=1e+02 Score=21.28 Aligned_cols=32 Identities=16% Similarity=0.256 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHHHHh--CCcEEEEccCCCCccCC
Q psy8974 29 DFDKKIKVLSEWIDK--AKHVVLHTGAGISTSAG 60 (79)
Q Consensus 29 ~~~~~~~~l~~~l~~--s~~ivvltGAGiSt~sG 60 (79)
+|-..+.+..+.+.. .-++|||||+|=.=.+|
T Consensus 44 ~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG 77 (279)
T 3g64_A 44 EAYADLRDLLAELSRRRAVRALVLAGEGRGFCSG 77 (279)
T ss_dssp HHHHHHHHHHHHHHHTTCCSEEEEEECSSCSBCC
T ss_pred HHHHHHHHHHHHHHhCCCceEEEEECCCCceecC
Confidence 344444444444433 34799999999555555
No 125
>1dci_A Dienoyl-COA isomerase; lyase; 1.50A {Rattus norvegicus} SCOP: c.14.1.3 PDB: 2vre_A
Probab=27.54 E-value=97 Score=21.25 Aligned_cols=32 Identities=25% Similarity=0.289 Sum_probs=18.6
Q ss_pred HHHHHHHHHHHHHHh--CCcEEEEccCCCCccCC
Q psy8974 29 DFDKKIKVLSEWIDK--AKHVVLHTGAGISTSAG 60 (79)
Q Consensus 29 ~~~~~~~~l~~~l~~--s~~ivvltGAGiSt~sG 60 (79)
+|-..+.+..+.+.. .-++|||||+|=.=.+|
T Consensus 31 ~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG 64 (275)
T 1dci_A 31 AFWRELVECFQKISKDSDCRAVVVSGAGKMFTSG 64 (275)
T ss_dssp HHHHHHHHHHHHHHTCTTCCEEEEEESTTCSBCC
T ss_pred HHHHHHHHHHHHHHhCCCceEEEEECCCCCccCC
Confidence 444444444444443 34799999998444444
No 126
>3njd_A Enoyl-COA hydratase; ssgcid, mycobacerium smegmatis, structu genomics, seattle structural genomics center for infectious lyase; 1.75A {Mycobacterium smegmatis} PDB: 3njb_A
Probab=27.39 E-value=92 Score=22.30 Aligned_cols=32 Identities=34% Similarity=0.438 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHHHh--CCcEEEEccCCCCccCC
Q psy8974 29 DFDKKIKVLSEWIDK--AKHVVLHTGAGISTSAG 60 (79)
Q Consensus 29 ~~~~~~~~l~~~l~~--s~~ivvltGAGiSt~sG 60 (79)
+|-..+....+.+.. .-++|||||+|=.=.+|
T Consensus 62 ~m~~eL~~al~~~~~d~~vrvvVltG~G~~FcaG 95 (333)
T 3njd_A 62 DTPLELSALVERADLDPDVHVILVSGRGEGFCAG 95 (333)
T ss_dssp HHHHHHHHHHHHHHHCTTCCEEEEEESTTSSBCC
T ss_pred HHHHHHHHHHHHHhhCCCcEEEEEECCCCceecC
Confidence 444445554444443 34799999998655555
No 127
>3qk8_A Enoyl-COA hydratase ECHA15; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 1.60A {Mycobacterium marinum M} SCOP: c.14.1.0 PDB: 3q1t_A
Probab=27.35 E-value=84 Score=21.74 Aligned_cols=17 Identities=41% Similarity=0.532 Sum_probs=12.3
Q ss_pred CCcEEEEccCCCCccCC
Q psy8974 44 AKHVVLHTGAGISTSAG 60 (79)
Q Consensus 44 s~~ivvltGAGiSt~sG 60 (79)
.-++|||||+|=.=.+|
T Consensus 57 ~vr~vVltg~g~~F~aG 73 (272)
T 3qk8_A 57 DVRVVLVRGEGKAFSSG 73 (272)
T ss_dssp TCSEEEEEESSSCSBCE
T ss_pred CceEEEEECCCCCeeCC
Confidence 34789999999554554
No 128
>3ju1_A Enoyl-COA hydratase/isomerase family protein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 2.30A {Shewanella oneidensis}
Probab=27.23 E-value=66 Score=24.02 Aligned_cols=32 Identities=25% Similarity=0.318 Sum_probs=18.2
Q ss_pred HHHHHHHHHHHHHHhC--CcEEEEccCC-CCccCC
Q psy8974 29 DFDKKIKVLSEWIDKA--KHVVLHTGAG-ISTSAG 60 (79)
Q Consensus 29 ~~~~~~~~l~~~l~~s--~~ivvltGAG-iSt~sG 60 (79)
+|-..+....+.+... -++|||||+| =.=.+|
T Consensus 69 ~m~~~L~~al~~~~~d~~vr~vVltG~G~~~FcaG 103 (407)
T 3ju1_A 69 DMVRAMTVQLNLWKKDPLIACVVLDGSGEKAFCAG 103 (407)
T ss_dssp HHHHHHHHHHHHHHHCTTEEEEEEEESSSSEEECC
T ss_pred HHHHHHHHHHHHHHhCCCcEEEEEecCCCCcccCC
Confidence 4444444444444433 3689999999 233444
No 129
>3hh1_A Tetrapyrrole methylase family protein; chlorobium tepidum, structural genom 2, protein structure initiative; 1.85A {Chlorobaculum tepidum}
Probab=27.12 E-value=79 Score=18.98 Aligned_cols=31 Identities=29% Similarity=0.548 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHhCCcEEEEccCCCCccCCCCCCCCcc
Q psy8974 32 KKIKVLSEWIDKAKHVVLHTGAGISTSAGIPDFSGPH 68 (79)
Q Consensus 32 ~~~~~l~~~l~~s~~ivvltGAGiSt~sGIPdfR~~~ 68 (79)
+..+.+.+.+++-+++++++ ++|.|-+=++.
T Consensus 67 ~~~~~i~~~~~~G~~V~~l~------d~GdP~i~~~~ 97 (117)
T 3hh1_A 67 RAVRQVIELLEEGSDVALVT------DAGTPAISDPG 97 (117)
T ss_dssp HHHHHHHHHHHTTCCEEEEE------ETTSCGGGSTT
T ss_pred HHHHHHHHHHHCCCeEEEEe------cCCcCeEeccH
Confidence 45667777788788899988 45566665543
No 130
>2ij9_A Uridylate kinase; structural genomics, protein structure initiative, P nysgxrc; 2.90A {Archaeoglobus fulgidus} SCOP: c.73.1.3
Probab=26.99 E-value=61 Score=21.34 Aligned_cols=27 Identities=19% Similarity=0.307 Sum_probs=16.5
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEEEccCC
Q psy8974 27 KEDFDKKIKVLSEWIDKAKHVVLHTGAG 54 (79)
Q Consensus 27 ~~~~~~~~~~l~~~l~~s~~ivvltGAG 54 (79)
++.+.+-++.++.+.. -.++|++.|+|
T Consensus 16 ~~~~~~~~~~i~~l~~-g~~vvlV~ggG 42 (219)
T 2ij9_A 16 SEKIREFAKTIESVAQ-QNQVFVVVGGG 42 (219)
T ss_dssp HHHHHHHHHHHHHHHH-HSEEEEEECCH
T ss_pred HHHHHHHHHHHHHHcC-CCEEEEEECcc
Confidence 3444444555555545 56788888876
No 131
>1hzd_A AUH, AU-binding protein/enoyl-COA hydratase; RNA-binding protein,enoyl-COA hydratase, riken structural genomics/proteomics initiative, RSGI; 2.20A {Homo sapiens} SCOP: c.14.1.3 PDB: 2zqq_A 2zqr_A
Probab=26.96 E-value=61 Score=22.43 Aligned_cols=25 Identities=4% Similarity=0.011 Sum_probs=14.8
Q ss_pred HHHHHHHHHHHHHh--CCcEEEEccCC
Q psy8974 30 FDKKIKVLSEWIDK--AKHVVLHTGAG 54 (79)
Q Consensus 30 ~~~~~~~l~~~l~~--s~~ivvltGAG 54 (79)
|-..+.+..+.+.. .-++|||||+|
T Consensus 40 ~~~~L~~al~~~~~d~~vr~vVltg~g 66 (272)
T 1hzd_A 40 LIKMLSKAVDALKSDKKVRTIIIRSEV 66 (272)
T ss_dssp HHHHHHHHHHHHHHCSSCSEEEEEESB
T ss_pred HHHHHHHHHHHHHhCCCeEEEEEecCC
Confidence 33444444444443 34789999987
No 132
>3qre_A Enoyl-COA hydratase, ECHA12_1; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 2.40A {Mycobacterium marinum M}
Probab=26.91 E-value=85 Score=22.15 Aligned_cols=32 Identities=22% Similarity=0.303 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHHHHh--CCcEEEEccCCCCccCC
Q psy8974 29 DFDKKIKVLSEWIDK--AKHVVLHTGAGISTSAG 60 (79)
Q Consensus 29 ~~~~~~~~l~~~l~~--s~~ivvltGAGiSt~sG 60 (79)
+|-..+.+..+.+.. .=++|||||+|=.=.+|
T Consensus 57 ~~~~~L~~al~~~~~d~~vr~vVltg~G~~FcaG 90 (298)
T 3qre_A 57 DLAAGFYAAIDRAEADPGIRVIVLTGRGRGFCAG 90 (298)
T ss_dssp HHHHHHHHHHHHHHHCTTCCEEEEEESTTCSEEC
T ss_pred HHHHHHHHHHHHHHhCCCceEEEEECCCCCcccC
Confidence 344444444444443 34799999998544444
No 133
>2zqe_A MUTS2 protein; alpha/beta, ATP-binding, DNA-binding, nucleotide-binding, DN protein; 1.70A {Thermus thermophilus}
Probab=26.48 E-value=72 Score=18.57 Aligned_cols=26 Identities=15% Similarity=0.290 Sum_probs=18.2
Q ss_pred HHHHHHHHHHHHHhC-----CcEEEEccCCC
Q psy8974 30 FDKKIKVLSEWIDKA-----KHVVLHTGAGI 55 (79)
Q Consensus 30 ~~~~~~~l~~~l~~s-----~~ivvltGAGi 55 (79)
.++....|.++|.+| +.+.|++|=|-
T Consensus 14 ~~eA~~~l~~fl~~a~~~g~~~v~IIHGkG~ 44 (83)
T 2zqe_A 14 VAEALLEVDQALEEARALGLSTLRLLHGKGT 44 (83)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEEECCSTT
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEEEEECCCc
Confidence 345566666666654 78999999884
No 134
>2j4j_A Uridylate kinase; transferase, nucleoside monophosphate kinase, UMP kinase, aspartokinase fold, pyrimidine nucleotide synthesis; HET: U5P ACP 4TC; 2.1A {Sulfolobus solfataricus} PDB: 2j4k_A* 2j4l_A*
Probab=26.40 E-value=72 Score=21.15 Aligned_cols=27 Identities=22% Similarity=0.283 Sum_probs=15.6
Q ss_pred HHHHHHHHHHHHHHHhCCcEEEEccCC
Q psy8974 28 EDFDKKIKVLSEWIDKAKHVVLHTGAG 54 (79)
Q Consensus 28 ~~~~~~~~~l~~~l~~s~~ivvltGAG 54 (79)
+.+.+-++.++.+...-.++|++.|+|
T Consensus 18 ~~~~~~~~~i~~l~~~g~~vvlV~ggG 44 (226)
T 2j4j_A 18 DNLIVLRQSIKELADNGFRVGIVTGGG 44 (226)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEECCH
T ss_pred HHHHHHHHHHHHHHhCCCeEEEEECcc
Confidence 334444444444444456788888875
No 135
>1uiy_A Enoyl-COA hydratase; lyase, beta-oxidation, crotonase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.85A {Thermus thermophilus} SCOP: c.14.1.3
Probab=26.23 E-value=1.2e+02 Score=20.41 Aligned_cols=33 Identities=21% Similarity=0.260 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHHHHh--CCcEEEEccCCCCccCCC
Q psy8974 29 DFDKKIKVLSEWIDK--AKHVVLHTGAGISTSAGI 61 (79)
Q Consensus 29 ~~~~~~~~l~~~l~~--s~~ivvltGAGiSt~sGI 61 (79)
+|-..+.+..+.+.. .-++|||||+|=.=.+|.
T Consensus 26 ~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~ 60 (253)
T 1uiy_A 26 EMALSLLQALDDLEADPGVRAVVLTGRGKAFSAGA 60 (253)
T ss_dssp HHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCC
T ss_pred HHHHHHHHHHHHHHhCCCceEEEEECCCCCcccCc
Confidence 444444444444443 347999999985445553
No 136
>1pjh_A Enoyl-COA isomerase; ECI1P; beta-BETA-alpha spiral fold, inter-trimer contacts; 2.10A {Saccharomyces cerevisiae} SCOP: c.14.1.3 PDB: 1hno_A 1k39_A* 1hnu_A
Probab=26.16 E-value=1.1e+02 Score=21.06 Aligned_cols=32 Identities=19% Similarity=0.101 Sum_probs=17.9
Q ss_pred HHHHHHHHHHHHHHh--CCcEEEEccCCCCccCC
Q psy8974 29 DFDKKIKVLSEWIDK--AKHVVLHTGAGISTSAG 60 (79)
Q Consensus 29 ~~~~~~~~l~~~l~~--s~~ivvltGAGiSt~sG 60 (79)
+|-..+.+..+.+.. .-++|||||+|=.=.+|
T Consensus 36 ~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG 69 (280)
T 1pjh_A 36 EDYIYLGELLELADRNRDVYFTIIQSSGRFFSSG 69 (280)
T ss_dssp HHHHHHHHHHHHHHHCTTCCEEEEECBTTBSBCC
T ss_pred HHHHHHHHHHHHHhcCCCceEEEEECCCCCccCC
Confidence 344444444444433 34799999998443444
No 137
>3r9q_A Enoyl-COA hydratase/isomerase; ssgcid, lyase,isomerase; 2.10A {Mycobacterium abscessus} PDB: 3qka_A
Probab=25.99 E-value=1.1e+02 Score=20.98 Aligned_cols=32 Identities=16% Similarity=0.040 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHHHHh--CCcEEEEccCCCCccCC
Q psy8974 29 DFDKKIKVLSEWIDK--AKHVVLHTGAGISTSAG 60 (79)
Q Consensus 29 ~~~~~~~~l~~~l~~--s~~ivvltGAGiSt~sG 60 (79)
+|-..+.+..+.+.. .-++|||||+|=.=.+|
T Consensus 38 ~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG 71 (262)
T 3r9q_A 38 PTAAALLAAFTEFDADPEASVAVLWGDNGTFCAG 71 (262)
T ss_dssp HHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCC
T ss_pred HHHHHHHHHHHHHHhCCCceEEEEECCCCCccCC
Confidence 444445444444443 34799999998555555
No 138
>3p5m_A Enoyl-COA hydratase/isomerase; seattle structural genomics center for infectious disease, S coenzyme A, tuberculosis; 2.05A {Mycobacterium avium}
Probab=25.74 E-value=95 Score=21.20 Aligned_cols=32 Identities=25% Similarity=0.279 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHHHHh--CCcEEEEccCCCCccCC
Q psy8974 29 DFDKKIKVLSEWIDK--AKHVVLHTGAGISTSAG 60 (79)
Q Consensus 29 ~~~~~~~~l~~~l~~--s~~ivvltGAGiSt~sG 60 (79)
+|-+.+.+..+.+.. .-++|||||+|=.=.+|
T Consensus 33 ~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG 66 (255)
T 3p5m_A 33 PMLEELSVHIRDAEADESVRAVLLTGAGRAFCSG 66 (255)
T ss_dssp HHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCE
T ss_pred HHHHHHHHHHHHHhhCCCeEEEEEECCCCCccCC
Confidence 344444444444443 35799999998544554
No 139
>3trr_A Probable enoyl-COA hydratase/isomerase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.09A {Mycobacterium abscessus}
Probab=25.62 E-value=94 Score=21.27 Aligned_cols=32 Identities=25% Similarity=0.351 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHHHHh--CCcEEEEccCCCCccCC
Q psy8974 29 DFDKKIKVLSEWIDK--AKHVVLHTGAGISTSAG 60 (79)
Q Consensus 29 ~~~~~~~~l~~~l~~--s~~ivvltGAGiSt~sG 60 (79)
+|-..+.+..+.+.. .-++|||||+|=.=.+|
T Consensus 34 ~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG 67 (256)
T 3trr_A 34 AVSQGLAAAADQLDSSADLSVAIITGAGGNFCAG 67 (256)
T ss_dssp HHHHHHHHHHHHHHHCTTCCEEEEEEGGGCCCCC
T ss_pred HHHHHHHHHHHHHhcCCCeEEEEEECCCCceecC
Confidence 444444444444443 34799999998555555
No 140
>3d40_A FOMA protein; fosfomycin, antibiotic resistance, kinase, phosphoryl transfer, transferase; 1.53A {Streptomyces wedmorensis} PDB: 3d41_A* 3qun_A* 3quo_A* 3qur_A* 3qvf_A* 3qvh_A*
Probab=25.49 E-value=1e+02 Score=21.49 Aligned_cols=28 Identities=14% Similarity=0.278 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHHHHhCC-cEEEEccCCCC
Q psy8974 29 DFDKKIKVLSEWIDKAK-HVVLHTGAGIS 56 (79)
Q Consensus 29 ~~~~~~~~l~~~l~~s~-~ivvltGAGiS 56 (79)
.+..-++.++++.+.-. ++||+.|+|--
T Consensus 48 ~l~~la~~Ia~l~~~G~~~vViVhGgG~~ 76 (286)
T 3d40_A 48 AVTRFARNFARLAETYRGRMVLISGGGAF 76 (286)
T ss_dssp HHHHHHHHHHHHHHHTTTSEEEEECCCCC
T ss_pred HHHHHHHHHHHHHHcCCCeEEEEECCHHH
Confidence 44555556666655554 68888998854
No 141
>3utn_X Thiosulfate sulfurtransferase TUM1; rhodanese-like domain; 1.90A {Saccharomyces cerevisiae}
Probab=25.48 E-value=30 Score=25.15 Aligned_cols=30 Identities=27% Similarity=0.519 Sum_probs=22.3
Q ss_pred hCCcEEEEccCCCCc--------cCCCCCCCCcc-hhhh
Q psy8974 43 KAKHVVLHTGAGIST--------SAGIPDFSGPH-YWRR 72 (79)
Q Consensus 43 ~s~~ivvltGAGiSt--------~sGIPdfR~~~-~w~~ 72 (79)
..+.||+.+|.|+.+ ..|+++-|--+ .|..
T Consensus 274 ~~k~vI~yCgsGvtA~~~~laL~~lG~~~v~lYdGSWsE 312 (327)
T 3utn_X 274 PSKPTICSCGTGVSGVIIKTALELAGVPNVRLYDGSWTE 312 (327)
T ss_dssp TTSCEEEECSSSHHHHHHHHHHHHTTCCSEEEESSHHHH
T ss_pred CCCCEEEECChHHHHHHHHHHHHHcCCCCceeCCCcHHH
Confidence 468899999999864 58998866555 5543
No 142
>3pe8_A Enoyl-COA hydratase; emerald biostructures, structural genomics, seattle structur genomics center for infectious disease, ssgcid, lyase; 1.60A {Mycobacterium smegmatis} PDB: 3p85_A* 3qyr_A
Probab=25.35 E-value=1.2e+02 Score=20.84 Aligned_cols=32 Identities=22% Similarity=0.146 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHHHh--CCcEEEEccCCCCccCC
Q psy8974 29 DFDKKIKVLSEWIDK--AKHVVLHTGAGISTSAG 60 (79)
Q Consensus 29 ~~~~~~~~l~~~l~~--s~~ivvltGAGiSt~sG 60 (79)
+|-..+.+..+.+.. .-++||+||+|=.=.+|
T Consensus 36 ~~~~~L~~al~~~~~d~~vr~vvltg~g~~F~aG 69 (256)
T 3pe8_A 36 ELRSTFFRALSDAQNDDDVDVVIVTGADPVFCAG 69 (256)
T ss_dssp HHHHHHHHHHHHHHHCTTCSEEEEEESTTCSBCC
T ss_pred HHHHHHHHHHHHHHhCCCeEEEEEECCCCCccCC
Confidence 444444444444443 34789999998655555
No 143
>2uzf_A Naphthoate synthase; lyase, menaquinone biosynthesis; HET: CAA; 2.9A {Staphylococcus aureus}
Probab=25.34 E-value=90 Score=21.55 Aligned_cols=27 Identities=15% Similarity=0.049 Sum_probs=15.6
Q ss_pred HHHHHHHHHHHHHHh--CCcEEEEccCCC
Q psy8974 29 DFDKKIKVLSEWIDK--AKHVVLHTGAGI 55 (79)
Q Consensus 29 ~~~~~~~~l~~~l~~--s~~ivvltGAGi 55 (79)
+|-..+.+..+.+.. .=++|||||+|=
T Consensus 40 ~~~~~L~~al~~~~~d~~vr~vVltg~g~ 68 (273)
T 2uzf_A 40 KTVAEMIDAFSRARDDQNVSVIVLTGEGD 68 (273)
T ss_dssp HHHHHHHHHHHHHHHCTTCCEEEEEESSS
T ss_pred HHHHHHHHHHHHHHhCCCcEEEEEecCCC
Confidence 343444444444433 347899999985
No 144
>3sll_A Probable enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.35A {Mycobacterium abscessus}
Probab=25.28 E-value=1.1e+02 Score=21.37 Aligned_cols=32 Identities=28% Similarity=0.254 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHHHHh--CCcEEEEccCCCCccCC
Q psy8974 29 DFDKKIKVLSEWIDK--AKHVVLHTGAGISTSAG 60 (79)
Q Consensus 29 ~~~~~~~~l~~~l~~--s~~ivvltGAGiSt~sG 60 (79)
+|-..+.+..+.+.. .-++|||||+|=.=.+|
T Consensus 51 ~~~~~L~~al~~~~~d~~vr~vVltg~G~~F~aG 84 (290)
T 3sll_A 51 DVMLPFKQMLVDISHDNDVRAVVITGAGKGFCSG 84 (290)
T ss_dssp HHHHHHHHHHHHHHTCTTCCEEEEEESTTCSBCC
T ss_pred HHHHHHHHHHHHHHcCCCeeEEEEECCCCCeeCC
Confidence 444444444444443 34789999999555555
No 145
>4di1_A Enoyl-COA hydratase ECHA17; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis, ortholog; 2.25A {Mycobacterium marinum}
Probab=25.28 E-value=1.3e+02 Score=20.98 Aligned_cols=32 Identities=19% Similarity=0.169 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHHHHh--CCcEEEEccCCCCccCC
Q psy8974 29 DFDKKIKVLSEWIDK--AKHVVLHTGAGISTSAG 60 (79)
Q Consensus 29 ~~~~~~~~l~~~l~~--s~~ivvltGAGiSt~sG 60 (79)
+|-..+.+..+.+.. .-++|||||+|=.=.+|
T Consensus 50 ~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG 83 (277)
T 4di1_A 50 QVYREIVAAADELGRRDDIGAVVLFGGHEIFSAG 83 (277)
T ss_dssp HHHHHHHHHHHHHHHCTTCCEEEEECCSSCSBCC
T ss_pred HHHHHHHHHHHHHHhCCCcEEEEEECCCCCEecC
Confidence 444444444444443 34799999998665666
No 146
>3qxz_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.35A {Mycobacterium abscessus} SCOP: c.14.1.0
Probab=25.14 E-value=84 Score=21.61 Aligned_cols=32 Identities=22% Similarity=0.392 Sum_probs=18.6
Q ss_pred HHHHHHHHHHHHHHh--CCcEEEEccCCCCccCC
Q psy8974 29 DFDKKIKVLSEWIDK--AKHVVLHTGAGISTSAG 60 (79)
Q Consensus 29 ~~~~~~~~l~~~l~~--s~~ivvltGAGiSt~sG 60 (79)
+|-+.+.+..+.+.. .=++|||||+|=.=.+|
T Consensus 34 ~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG 67 (265)
T 3qxz_A 34 ELGRQLGAAYQRLDDDPAVRVIVLTGAPPAFCSG 67 (265)
T ss_dssp HHHHHHHHHHHHHHHCTTCCEEEEEESTTEEECC
T ss_pred HHHHHHHHHHHHHhhCCCceEEEEECCCCccccC
Confidence 444444444444443 34799999998544444
No 147
>3rrv_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.45A {Mycobacterium avium subsp}
Probab=25.09 E-value=1.2e+02 Score=21.09 Aligned_cols=32 Identities=28% Similarity=0.368 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHHHHh--CCcEEEEccCCCCccCC
Q psy8974 29 DFDKKIKVLSEWIDK--AKHVVLHTGAGISTSAG 60 (79)
Q Consensus 29 ~~~~~~~~l~~~l~~--s~~ivvltGAGiSt~sG 60 (79)
+|-..+.+..+.+.. .-++|||||+|=.=.+|
T Consensus 55 ~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG 88 (276)
T 3rrv_A 55 DLHVGLARLWQRLTDDPTARAAVITGAGRAFSAG 88 (276)
T ss_dssp HHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCC
T ss_pred HHHHHHHHHHHHHHhCCCceEEEEECCCCcccCC
Confidence 344444444444443 34799999999555555
No 148
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=25.09 E-value=66 Score=22.78 Aligned_cols=28 Identities=14% Similarity=0.209 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHhCCcEEEEccCCCCcc
Q psy8974 31 DKKIKVLSEWIDKAKHVVLHTGAGISTS 58 (79)
Q Consensus 31 ~~~~~~l~~~l~~s~~ivvltGAGiSt~ 58 (79)
.+.+.++.+.+++...+-|+.|.|||+.
T Consensus 184 ~~~~~~~v~~vr~~~~~Pv~vGfGIst~ 211 (252)
T 3tha_A 184 EAILQDKVKEIRSFTNLPIFVGFGIQNN 211 (252)
T ss_dssp HHHHHHHHHHHHTTCCSCEEEESSCCSH
T ss_pred CHHHHHHHHHHHHhcCCcEEEEcCcCCH
Confidence 4456666666776656677889999864
No 149
>4hdt_A 3-hydroxyisobutyryl-COA hydrolase; ssgcid, carnitinyl-COA dehydratase, enoyl-COA hydratase/ISOM mycobacterium thermoresistibIle; 1.60A {Mycobacterium thermoresistibile}
Probab=24.94 E-value=1.1e+02 Score=22.27 Aligned_cols=33 Identities=24% Similarity=0.230 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHHHHHh--CCcEEEEccCCC-CccCC
Q psy8974 28 EDFDKKIKVLSEWIDK--AKHVVLHTGAGI-STSAG 60 (79)
Q Consensus 28 ~~~~~~~~~l~~~l~~--s~~ivvltGAGi-St~sG 60 (79)
.+|-..+....+.+.. .=++|||||+|= .=.+|
T Consensus 35 ~~m~~~l~~al~~~~~d~~vr~vvltg~G~~~FcaG 70 (353)
T 4hdt_A 35 HGMVTTMAERLAAWENDDSVRAVLLTGAGERGLCAG 70 (353)
T ss_dssp HHHHHHHHHHHHHHHTCTTCCEEEEEESSSSBSBCC
T ss_pred HHHHHHHHHHHHHHHhCCCceEEEEEeCCCCCEecC
Confidence 3444555544444443 347899999983 44444
No 150
>2e0t_A Dual specificity phosphatase 26; conserved hypothetical protein, structural genomics, NPPSFA, project on protein structural and functional analyses; 1.67A {Homo sapiens}
Probab=24.81 E-value=1.2e+02 Score=18.26 Aligned_cols=28 Identities=14% Similarity=0.349 Sum_probs=18.5
Q ss_pred HHHHHHHHHHHH-hCCcEEEEccCCCCcc
Q psy8974 31 DKKIKVLSEWID-KAKHVVLHTGAGISTS 58 (79)
Q Consensus 31 ~~~~~~l~~~l~-~s~~ivvltGAGiSt~ 58 (79)
.+-++.+.+.+. ..+.++|.+.||+|..
T Consensus 71 ~~~~~~i~~~~~~~~~~vlVHC~aG~~RS 99 (151)
T 2e0t_A 71 QTAADFIHRALSQPGGKILVHCAVGVSRS 99 (151)
T ss_dssp HHHHHHHHHHHHSTTCCEEEECSSSSHHH
T ss_pred HHHHHHHHHHHhcCCCcEEEECCCCCChH
Confidence 333444444555 4688999999998754
No 151
>3qmj_A Enoyl-COA hydratase, ECHA8_6; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium marinum}
Probab=24.74 E-value=87 Score=21.31 Aligned_cols=32 Identities=28% Similarity=0.154 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHHHHh--CCcEEEEccCCCCccCC
Q psy8974 29 DFDKKIKVLSEWIDK--AKHVVLHTGAGISTSAG 60 (79)
Q Consensus 29 ~~~~~~~~l~~~l~~--s~~ivvltGAGiSt~sG 60 (79)
+|-+.+.+..+.+.. .-++|||||+|=.=.+|
T Consensus 33 ~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG 66 (256)
T 3qmj_A 33 ALYDATAQALLDAADDPQVAVVLLTGSGRGFSAG 66 (256)
T ss_dssp HHHHHHHHHHHHHHHCTTCCEEEEEESTTEEECC
T ss_pred HHHHHHHHHHHHHHhCCCceEEEEECCCCCcccC
Confidence 444445444444443 34799999998544455
No 152
>3eol_A Isocitrate lyase; seattle structural center for infectious disease, ssgcid; 2.00A {Brucella melitensis} PDB: 3oq8_A 3e5b_A 3p0x_A*
Probab=24.69 E-value=63 Score=24.97 Aligned_cols=19 Identities=32% Similarity=0.385 Sum_probs=3.2
Q ss_pred EEEEccCCCCc-----cCCCCCCC
Q psy8974 47 VVLHTGAGIST-----SAGIPDFS 65 (79)
Q Consensus 47 ivvltGAGiSt-----~sGIPdfR 65 (79)
.+-+||+|++. .-|+||.-
T Consensus 84 Aiy~SG~~vAa~~~~~~~G~PD~~ 107 (433)
T 3eol_A 84 AIYLSGWQVAADANTASAMYPDQS 107 (433)
T ss_dssp CEEEC-------------------
T ss_pred EEEechHHHHhccchhcCCCCCCc
Confidence 44589999987 45999973
No 153
>1szo_A 6-oxocamphor hydrolase; enzyme-product complex; HET: CAX; 1.90A {Rhodococcus SP} SCOP: c.14.1.3 PDB: 1o8u_A
Probab=24.42 E-value=1e+02 Score=21.13 Aligned_cols=32 Identities=22% Similarity=0.155 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHHHHh--CCcEEEEccCCCCccCC
Q psy8974 29 DFDKKIKVLSEWIDK--AKHVVLHTGAGISTSAG 60 (79)
Q Consensus 29 ~~~~~~~~l~~~l~~--s~~ivvltGAGiSt~sG 60 (79)
+|-..+.+..+.+.. .-++|||||+|=.=.+|
T Consensus 43 ~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG 76 (257)
T 1szo_A 43 TAHDELAYCFHDIACDRENKVVILTGTGPSFCNE 76 (257)
T ss_dssp HHHHHHHHHHHHHHHCTTCCEEEEECBTTBSBCE
T ss_pred HHHHHHHHHHHHHHhCCCceEEEEEcCCCccccC
Confidence 344444444444443 34899999998433344
No 154
>2wgp_A Dual specificity protein phosphatase 14; MKP6, DUSP14, hydrolase, dual specifici phosphatase; 1.88A {Homo sapiens}
Probab=24.26 E-value=1.5e+02 Score=19.10 Aligned_cols=28 Identities=25% Similarity=0.306 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHHhCCcEEEEccCCCCcc
Q psy8974 31 DKKIKVLSEWIDKAKHVVLHTGAGISTS 58 (79)
Q Consensus 31 ~~~~~~l~~~l~~s~~ivvltGAGiSt~ 58 (79)
.+.++-+.+.+...+.++|.+-||+|..
T Consensus 90 ~~~~~fi~~~~~~~~~VlVHC~aG~~RS 117 (190)
T 2wgp_A 90 DTVADKIHSVSRKHGATLVHCAAGVSRS 117 (190)
T ss_dssp HHHHHHHHHHHHTTCCEEEECSSSSSHH
T ss_pred HHHHHHHHHHHhcCCCEEEECCCCCCHH
Confidence 3334444455555688999999999854
No 155
>3tlf_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, otholog; 2.15A {Mycobacterium avium subsp} SCOP: c.14.1.0
Probab=24.17 E-value=89 Score=21.47 Aligned_cols=32 Identities=13% Similarity=0.228 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHHHHh--CCcEEEEccCCCCccCC
Q psy8974 29 DFDKKIKVLSEWIDK--AKHVVLHTGAGISTSAG 60 (79)
Q Consensus 29 ~~~~~~~~l~~~l~~--s~~ivvltGAGiSt~sG 60 (79)
+|-..+.+..+.+.. .-++|||||+|=.=.+|
T Consensus 38 ~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG 71 (274)
T 3tlf_A 38 HMITELRAAYHEAENDDRVWLLVVTGTGRAFCSG 71 (274)
T ss_dssp HHHHHHHHHHHHHHHCTTCCEEEEEESTTEEECC
T ss_pred HHHHHHHHHHHHHhcCCCeEEEEEeCCCCCcccC
Confidence 444445444444443 34799999998544444
No 156
>3r6h_A Enoyl-COA hydratase, ECHA3; ssgcid, mycobacerium marinum, structura genomics, seattle structural genomics center for infectious lyase; 1.75A {Mycobacterium marinum M} PDB: 4hc8_A*
Probab=24.11 E-value=1.2e+02 Score=20.34 Aligned_cols=18 Identities=17% Similarity=0.147 Sum_probs=13.3
Q ss_pred hCCcEEEEccCCCCccCC
Q psy8974 43 KAKHVVLHTGAGISTSAG 60 (79)
Q Consensus 43 ~s~~ivvltGAGiSt~sG 60 (79)
+.-++||+||+|=.=.+|
T Consensus 46 d~vr~vvltg~g~~F~aG 63 (233)
T 3r6h_A 46 DNVGALVIAGNHRVFSGG 63 (233)
T ss_dssp HTCSEEEEECCSSEEECC
T ss_pred CCCeEEEEECCCCCccCC
Confidence 345799999999655555
No 157
>2j5i_A P-hydroxycinnamoyl COA hydratase/lyase; vanillin, aldolase, crotonase, coenzyme-A; 1.8A {Pseudomonas fluorescens} PDB: 2j5i_B 2vss_A* 2j5i_I 2vss_F* 2vsu_A* 2vss_E* 2vsu_F* 2vsu_E* 2vsu_C*
Probab=24.09 E-value=1.1e+02 Score=21.07 Aligned_cols=32 Identities=25% Similarity=0.406 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHHHHhC--CcEEEEccCCCCccCC
Q psy8974 29 DFDKKIKVLSEWIDKA--KHVVLHTGAGISTSAG 60 (79)
Q Consensus 29 ~~~~~~~~l~~~l~~s--~~ivvltGAGiSt~sG 60 (79)
+|-..+.+..+.+... -++|||||+|=.=.+|
T Consensus 36 ~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG 69 (276)
T 2j5i_A 36 TLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAG 69 (276)
T ss_dssp HHHHHHHHHHHHHHTCTTEEEEEEEESTTCSBCC
T ss_pred HHHHHHHHHHHHHHhCCCceEEEEECCCCCCcCC
Confidence 3444444444444432 3789999998544444
No 158
>3fkj_A Putative phosphosugar isomerases; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.12A {Salmonella typhimurium LT2}
Probab=23.90 E-value=38 Score=24.40 Aligned_cols=36 Identities=17% Similarity=0.139 Sum_probs=24.3
Q ss_pred cCCCHHHHHHHHHHHHHHHH---hCCcEEEEccCCCCccC
Q psy8974 23 TFDSKEDFDKKIKVLSEWID---KAKHVVLHTGAGISTSA 59 (79)
Q Consensus 23 ~~d~~~~~~~~~~~l~~~l~---~s~~ivvltGAGiSt~s 59 (79)
+|.......+.++++.+.|. ++++ |+++|.|-|-.+
T Consensus 16 ~~t~~~l~~~~i~~~~~~i~~~~~a~~-I~i~G~GtS~~a 54 (347)
T 3fkj_A 16 YFQGMSVAHENARRIISDILGKQNIER-VWFVGCGGSLTG 54 (347)
T ss_dssp CCCCCCHHHHHHHHHHHHHHTTSCCCE-EEEEESTHHHHT
T ss_pred hHHHhhcCHHHHHHHHHHHHhhCCCCE-EEEEEehHHHHH
Confidence 34444455677889999998 5555 567888877543
No 159
>2va1_A Uridylate kinase; UMPK, transferase, pyrimidine biosynthesis, amino acid kinase family; 2.50A {Ureaplasma parvum}
Probab=23.70 E-value=79 Score=21.62 Aligned_cols=26 Identities=15% Similarity=0.169 Sum_probs=16.7
Q ss_pred HHHHHHHHHHHHHHHhCCcEEEEccCC
Q psy8974 28 EDFDKKIKVLSEWIDKAKHVVLHTGAG 54 (79)
Q Consensus 28 ~~~~~~~~~l~~~l~~s~~ivvltGAG 54 (79)
+.+.+-++.++++. .-.++|++.|+|
T Consensus 47 ~~i~~~a~~i~~l~-~g~~vVlVhGgG 72 (256)
T 2va1_A 47 IKINDLAEQIEKIS-KKYIVSIVLGGG 72 (256)
T ss_dssp HHHHHHHHHHHHHT-TTSEEEEEECCT
T ss_pred HHHHHHHHHHHHHh-CCCEEEEEECCc
Confidence 34444455555555 446789999888
No 160
>3nme_A Ptpkis1 protein, SEX4 glucan phosphatase; dual specificity phosphatase, carbohydrate BIND hydrolase; 2.40A {Arabidopsis thaliana}
Probab=23.65 E-value=43 Score=23.67 Aligned_cols=29 Identities=14% Similarity=0.242 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHH-hCCcEEEEccCCCCccC
Q psy8974 31 DKKIKVLSEWID-KAKHVVLHTGAGISTSA 59 (79)
Q Consensus 31 ~~~~~~l~~~l~-~s~~ivvltGAGiSt~s 59 (79)
.+.++.+.+.++ .-+.++|.+-||+|.++
T Consensus 92 ~~~~~~I~~~l~~~g~~VLVHC~aG~sRS~ 121 (294)
T 3nme_A 92 PAVVGTLYKAVKRNGGVTYVHSTAGMGRAP 121 (294)
T ss_dssp HHHHHHHHHHHHHHCSEEEEECSSSSSHHH
T ss_pred HHHHHHHHHHHHhCCCEEEEECCCCCchhH
Confidence 344445555554 34678999999998654
No 161
>3isa_A Putative enoyl-COA hydratase/isomerase; structural genomics, PSI-2, protein structure initiative, EN hydratase; 1.76A {Bordetella parapertussis}
Probab=23.65 E-value=1.4e+02 Score=20.28 Aligned_cols=23 Identities=30% Similarity=0.556 Sum_probs=15.3
Q ss_pred hCCcEEEEccCCCCccCC--CCCCC
Q psy8974 43 KAKHVVLHTGAGISTSAG--IPDFS 65 (79)
Q Consensus 43 ~s~~ivvltGAGiSt~sG--IPdfR 65 (79)
..-++|||||+|=.=.+| |..|.
T Consensus 49 ~~vr~vVltg~g~~F~aG~Dl~~~~ 73 (254)
T 3isa_A 49 EQVPLLVFAGAGRNFSAGFDFTDYE 73 (254)
T ss_dssp TTCSEEEEEESTTCSCCCBCCTTCT
T ss_pred CCcEEEEEECCCCceeeCcChHHhh
Confidence 345789999999655555 44443
No 162
>2buf_A Acetylglutamate kinase; acetyglutamate kinase, ADP, arginine biosynthesis, FEED-BACK inhibition, hexamer, transferase; HET: NLG ADP; 2.95A {Pseudomonas aeruginosa} SCOP: c.73.1.2
Probab=23.40 E-value=1.1e+02 Score=21.52 Aligned_cols=29 Identities=14% Similarity=-0.038 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEEEccCCC
Q psy8974 27 KEDFDKKIKVLSEWIDKAKHVVLHTGAGI 55 (79)
Q Consensus 27 ~~~~~~~~~~l~~~l~~s~~ivvltGAGi 55 (79)
+..+..-.+.++.+.+.-.++|++.|+|-
T Consensus 41 ~~~~~~~~~~i~~l~~~G~~vVlVhGgG~ 69 (300)
T 2buf_A 41 EELKAGFARDVVLMKAVGINPVVVHGGGP 69 (300)
T ss_dssp SHHHHHHHHHHHHHHHTTCEEEEEECCCH
T ss_pred chHHHHHHHHHHHHHHCCCeEEEEECCcH
Confidence 34455556666666666667888888864
No 163
>2ako_A Glutamate 5-kinase; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: ADP; 2.20A {Campylobacter jejuni} SCOP: c.73.1.3
Probab=23.30 E-value=74 Score=21.46 Aligned_cols=28 Identities=29% Similarity=0.413 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEEEccCCC
Q psy8974 27 KEDFDKKIKVLSEWIDKAKHVVLHTGAGI 55 (79)
Q Consensus 27 ~~~~~~~~~~l~~~l~~s~~ivvltGAGi 55 (79)
++.+.+-.+.++++.+. .++|++.|.|+
T Consensus 21 ~~~~~~~~~~i~~l~~~-~~vVlVhgGg~ 48 (251)
T 2ako_A 21 FERLKNLVAFLAKLMEK-YEVILVTSAAI 48 (251)
T ss_dssp HHHHHHHHHHHHHHHHH-SEEEEEECCHH
T ss_pred HHHHHHHHHHHHHHHhC-CCEEEEECCHH
Confidence 44555566667777666 78888887664
No 164
>2brx_A Uridylate kinase; UMP kinase, amino acid kinase, phosphoryl group transfer, pyrimidine biosynthesis, transferase; 2.40A {Pyrococcus furiosus} SCOP: c.73.1.3 PDB: 2ji5_A* 2bmu_A* 2bri_A*
Probab=23.29 E-value=70 Score=21.73 Aligned_cols=27 Identities=15% Similarity=0.187 Sum_probs=17.6
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEEEccCC
Q psy8974 27 KEDFDKKIKVLSEWIDKAKHVVLHTGAG 54 (79)
Q Consensus 27 ~~~~~~~~~~l~~~l~~s~~ivvltGAG 54 (79)
++.+..-++.++++.. -.++|++.|+|
T Consensus 38 ~~~i~~~~~~i~~l~~-g~~vViV~GgG 64 (244)
T 2brx_A 38 IDFIKEIAYQLTKVSE-DHEVAVVVGGG 64 (244)
T ss_dssp HHHHHHHHHHHHHHHH-HSEEEEEECCH
T ss_pred HHHHHHHHHHHHHHhC-CCeEEEEECcc
Confidence 3444555555666555 56789999887
No 165
>2nap_A Protein (periplasmic nitrate reductase); nitrogenous acceptor, dissimilatory nitrate reductase; HET: MGD MES; 1.90A {Desulfovibrio desulfuricans} SCOP: b.52.2.2 c.81.1.1 PDB: 2jim_A* 2jir_A* 2jip_A* 2v45_A* 2v3v_A* 2jiq_A* 2jio_A*
Probab=22.84 E-value=84 Score=24.43 Aligned_cols=25 Identities=12% Similarity=0.039 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHhCCcEEEEccCCCC
Q psy8974 32 KKIKVLSEWIDKAKHVVLHTGAGIS 56 (79)
Q Consensus 32 ~~~~~l~~~l~~s~~ivvltGAGiS 56 (79)
+.+.++++.+.++++.+|+.|.|+.
T Consensus 287 ~~i~~~A~~~a~a~~~~i~~g~g~~ 311 (723)
T 2nap_A 287 EQIYGAARAFAESAATMSLWCMGIN 311 (723)
T ss_dssp HHHHHHHHHHHHSSSEEEEECTTTS
T ss_pred HHHHHHHHHHHhCCCeEEEeccccc
Confidence 5688899999999999898888774
No 166
>2a7k_A CARB; crotonase, antibiotic, beta-lactam, biosynthetic protein; 2.24A {Pectobacterium carotovorum} SCOP: c.14.1.3 PDB: 2a81_A*
Probab=22.83 E-value=1.5e+02 Score=19.96 Aligned_cols=32 Identities=25% Similarity=0.239 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHHHHh--CCcEEEEcc-CCCCccCC
Q psy8974 29 DFDKKIKVLSEWIDK--AKHVVLHTG-AGISTSAG 60 (79)
Q Consensus 29 ~~~~~~~~l~~~l~~--s~~ivvltG-AGiSt~sG 60 (79)
+|-+.+.+..+.+.. .-++||||| +|=.=.+|
T Consensus 27 ~~~~~l~~al~~~~~d~~vr~vVltg~~g~~F~aG 61 (250)
T 2a7k_A 27 TLETSVKDALARANADDSVRAVVVYGGAERSFSAG 61 (250)
T ss_dssp HHHHHHHHHHHHHHHCTTCCEEEEECCTTSCSBCB
T ss_pred HHHHHHHHHHHHHHhCCCcEEEEEECCCCCCccCC
Confidence 444445444444443 347999999 87443444
No 167
>4f47_A Enoyl-COA hydratase ECHA19; ssgcid, seattle structural genomics center for infectious DI niaid; 1.75A {Mycobacterium marinum}
Probab=22.71 E-value=1.3e+02 Score=20.78 Aligned_cols=32 Identities=22% Similarity=0.236 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHHHHh--CCcEEEEccCCCCccCC
Q psy8974 29 DFDKKIKVLSEWIDK--AKHVVLHTGAGISTSAG 60 (79)
Q Consensus 29 ~~~~~~~~l~~~l~~--s~~ivvltGAGiSt~sG 60 (79)
+|-..+.+..+.+.. .-++|||||+|=.=.+|
T Consensus 47 ~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG 80 (278)
T 4f47_A 47 EMMQIMVEAWDRVDNDPDIRCCILTGAGGYFCAG 80 (278)
T ss_dssp HHHHHHHHHHHHHHHCTTCCEEEEEESTTCCC--
T ss_pred HHHHHHHHHHHHHhcCCCeeEEEEECCCCcccCC
Confidence 444444444444443 34789999998655555
No 168
>1mj3_A Enoyl-COA hydratase, mitochondrial; homohexamer, lyase; HET: HXC; 2.10A {Rattus norvegicus} SCOP: c.14.1.3 PDB: 2dub_A* 1dub_A* 1ey3_A* 2hw5_A*
Probab=22.66 E-value=1.1e+02 Score=20.82 Aligned_cols=32 Identities=19% Similarity=0.237 Sum_probs=17.8
Q ss_pred HHHHHHHHHHHHHHh--CCcEEEEccCCCCccCC
Q psy8974 29 DFDKKIKVLSEWIDK--AKHVVLHTGAGISTSAG 60 (79)
Q Consensus 29 ~~~~~~~~l~~~l~~--s~~ivvltGAGiSt~sG 60 (79)
+|-+.+.+..+.+.. .-++|||||+|=.=.+|
T Consensus 34 ~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG 67 (260)
T 1mj3_A 34 GLIEELNQALETFEEDPAVGAIVLTGGEKAFAAG 67 (260)
T ss_dssp HHHHHHHHHHHHHHHCTTCCEEEEECCSSEEECC
T ss_pred HHHHHHHHHHHHHHhCCCeeEEEEECCCCCccCC
Confidence 344444444444443 24799999988433344
No 169
>2gtr_A CDY-like, chromodomain Y-like protein; structural genomics, structural genomics consortium, SGC, unknown function; 1.90A {Homo sapiens} PDB: 2fw2_A
Probab=22.33 E-value=1.1e+02 Score=20.87 Aligned_cols=32 Identities=13% Similarity=0.197 Sum_probs=17.5
Q ss_pred HHHHHHHHHHHHHH-hCCcEEEEccCCCCccCC
Q psy8974 29 DFDKKIKVLSEWID-KAKHVVLHTGAGISTSAG 60 (79)
Q Consensus 29 ~~~~~~~~l~~~l~-~s~~ivvltGAGiSt~sG 60 (79)
+|-..+.+..+.+. +..++||+||+|=.=.+|
T Consensus 33 ~~~~~L~~al~~~~~d~~r~vvltg~g~~F~aG 65 (261)
T 2gtr_A 33 EVMREVQSALSTAAADDSKLVLLSAVGSVFCCG 65 (261)
T ss_dssp HHHHHHHHHHHHHHHSSCSCEEEEESSSCSBCE
T ss_pred HHHHHHHHHHHHHhcCCCEEEEEecCCCccccc
Confidence 34344444333333 234899999998444444
No 170
>2pbp_A Enoyl-COA hydratase subunit I; B-oxidation, structural genomics, NPPSFA, nationa on protein structural and functional analyses; 1.80A {Geobacillus kaustophilus} PDB: 2qq3_A
Probab=22.10 E-value=1.1e+02 Score=20.75 Aligned_cols=32 Identities=28% Similarity=0.372 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHHHHh--CCcEEEEccCCCCccCC
Q psy8974 29 DFDKKIKVLSEWIDK--AKHVVLHTGAGISTSAG 60 (79)
Q Consensus 29 ~~~~~~~~l~~~l~~--s~~ivvltGAGiSt~sG 60 (79)
+|-..+.+..+.+.. .-++|||||+|=.=.+|
T Consensus 32 ~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG 65 (258)
T 2pbp_A 32 QMVAEIVAAVEAFDRNEKVRVIVLTGRGRAFAAG 65 (258)
T ss_dssp HHHHHHHHHHHHHHHCTTCCEEEEEESTTEEECC
T ss_pred HHHHHHHHHHHHHhhCCCceEEEEECCCCCccCC
Confidence 344444444444443 24799999987544444
No 171
>3trj_A Phosphoheptose isomerase; lipopolysaccharide biosynthesis; 2.80A {Francisella tularensis subsp}
Probab=22.09 E-value=41 Score=22.15 Aligned_cols=24 Identities=25% Similarity=0.311 Sum_probs=13.4
Q ss_pred HHHHHHHHH----HhCCcEEEEccCCCCc
Q psy8974 33 KIKVLSEWI----DKAKHVVLHTGAGIST 57 (79)
Q Consensus 33 ~~~~l~~~l----~~s~~ivvltGAGiSt 57 (79)
.+++.+++| +++++| ++.|.|-|.
T Consensus 31 ~i~~a~~~i~~al~~~~~I-~i~G~G~S~ 58 (201)
T 3trj_A 31 AIAQAAKAMVSCLENGGKV-LVCGNGSSG 58 (201)
T ss_dssp HHHHHHHHHHHHHHTTCCE-EEEESTHHH
T ss_pred HHHHHHHHHHHHHHCCCEE-EEEeCcHhH
Confidence 444444444 444554 567888764
No 172
>2y96_A Dual specificity phosphatase DUPD1; hydrolase; 2.38A {Homo sapiens}
Probab=22.00 E-value=1.6e+02 Score=19.55 Aligned_cols=30 Identities=23% Similarity=0.325 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHH-HhCCcEEEEccCCCCccC
Q psy8974 30 FDKKIKVLSEWI-DKAKHVVLHTGAGISTSA 59 (79)
Q Consensus 30 ~~~~~~~l~~~l-~~s~~ivvltGAGiSt~s 59 (79)
+.+.++.+.+.+ ...+.|+|.+-||+|.++
T Consensus 124 ~~~~~~fI~~~l~~~~~~VLVHC~aG~sRS~ 154 (219)
T 2y96_A 124 FYPAAAFIDRALSDDHSKILVHCVMGRSRSA 154 (219)
T ss_dssp HHHHHHHHHHHHTSTTCCEEEECSSSSSHHH
T ss_pred HHHHHHHHHHHHHccCCeEEEECCCCCCHHH
Confidence 344444445555 345789999999998543
No 173
>1wz8_A Enoyl-COA hydratase; lyase, crotonase, hexamer, structural genomics, riken S genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.14.1.3
Probab=21.40 E-value=1e+02 Score=21.04 Aligned_cols=32 Identities=22% Similarity=0.256 Sum_probs=17.7
Q ss_pred HHHHHHHHHHHHHHh--CCcEEEEccCCCCccCC
Q psy8974 29 DFDKKIKVLSEWIDK--AKHVVLHTGAGISTSAG 60 (79)
Q Consensus 29 ~~~~~~~~l~~~l~~--s~~ivvltGAGiSt~sG 60 (79)
+|-..+.+..+.+.. .-++|||||+|=.=.+|
T Consensus 37 ~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG 70 (264)
T 1wz8_A 37 ALHRGLARVWRDLEAVEGVRAVLLRGEGGVFSAG 70 (264)
T ss_dssp HHHHHHHHHHHHHTTCTTCSEEEEEEGGGCCBCC
T ss_pred HHHHHHHHHHHHHhcCCCeeEEEEECCCCCCccc
Confidence 333444444444432 24799999998444444
No 174
>2q35_A CURF; crotonase, lyase; 1.65A {Lyngbya majuscula} PDB: 2q34_A 2q2x_A
Probab=20.99 E-value=1.1e+02 Score=20.63 Aligned_cols=32 Identities=22% Similarity=0.234 Sum_probs=18.2
Q ss_pred HHHHHHHHHHHHHHh--CCcEEEEccCCCCccCC
Q psy8974 29 DFDKKIKVLSEWIDK--AKHVVLHTGAGISTSAG 60 (79)
Q Consensus 29 ~~~~~~~~l~~~l~~--s~~ivvltGAGiSt~sG 60 (79)
+|-+.+.+..+.+.. .-++||+||+|=.=.+|
T Consensus 30 ~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG 63 (243)
T 2q35_A 30 SIVEGLRHCFSVVAQNQQYKVVILTGYGNYFSSG 63 (243)
T ss_dssp HHHHHHHHHHHHHHHCTTCCEEEEECBTTEEECB
T ss_pred HHHHHHHHHHHHHHhCCCceEEEEECCCCCeeCC
Confidence 344444444444443 34799999988444444
No 175
>2iv2_X Formate dehydrogenase H; oxidoreductase, 4Fe-4S, anaerobic, complete proteome, direct protein sequencing, Fe4S4, iron, iron sulfur cluster; HET: 2MD MGD; 2.27A {Escherichia coli} SCOP: b.52.2.2 c.81.1.1 PDB: 1fdi_A* 1fdo_A* 1aa6_A*
Probab=20.64 E-value=87 Score=24.43 Aligned_cols=25 Identities=20% Similarity=0.353 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHhCCcEEEEccCCCC
Q psy8974 32 KKIKVLSEWIDKAKHVVLHTGAGIS 56 (79)
Q Consensus 32 ~~~~~l~~~l~~s~~ivvltGAGiS 56 (79)
+++.++++.+.++++.+++.|.|+.
T Consensus 276 ~~I~~lA~~~a~a~~~~i~~g~g~~ 300 (715)
T 2iv2_X 276 SEIRQAARMYAQAKSAAILWGMGVT 300 (715)
T ss_dssp HHHHHHHHHHHHSSSEEEEEETTGG
T ss_pred HHHHHHHHHHHhCCCeEEEEccccc
Confidence 5688999999999998888888764
No 176
>2a26_A Calcyclin-binding protein; helical hairpin, dimerization, apoptosis; HET: CXS; 1.20A {Homo sapiens} SCOP: a.2.16.1
Probab=20.37 E-value=1.2e+02 Score=16.54 Aligned_cols=21 Identities=19% Similarity=0.435 Sum_probs=16.8
Q ss_pred CHHHHHHHHHHHHHHHHhCCc
Q psy8974 26 SKEDFDKKIKVLSEWIDKAKH 46 (79)
Q Consensus 26 ~~~~~~~~~~~l~~~l~~s~~ 46 (79)
..+++...+++|..++..+++
T Consensus 5 ~~eeL~~DL~El~~Ll~~AkR 25 (50)
T 2a26_A 5 ASEELQKDLEEVKVLLEKATR 25 (50)
T ss_dssp CHHHHHHHHHHHHHHHHHCCS
T ss_pred cHHHHHHHHHHHHHHHHHhcc
Confidence 346788889999999988765
No 177
>3lfh_A Manxa, phosphotransferase system, mannose/fructose-speci component IIA; PTS; 1.80A {Thermoanaerobacter tengcongensis} SCOP: c.54.1.0
Probab=20.02 E-value=1.3e+02 Score=19.15 Aligned_cols=28 Identities=11% Similarity=0.162 Sum_probs=19.1
Q ss_pred CHHHHHHHHHHHHHHH-HhCCcEEEEccC
Q psy8974 26 SKEDFDKKIKVLSEWI-DKAKHVVLHTGA 53 (79)
Q Consensus 26 ~~~~~~~~~~~l~~~l-~~s~~ivvltGA 53 (79)
+++++.+++.+..+-+ ...+-++|||--
T Consensus 42 ~~~~~~~~i~~~i~~~~~~~~gvliLtDl 70 (144)
T 3lfh_A 42 NIEVVRKEVEKIIKEKLQEDKEIIIVVDL 70 (144)
T ss_dssp CHHHHHHHHHHHHHHHHTTTCEEEEEESS
T ss_pred CHHHHHHHHHHHHHHhhCCCCcEEEEEeC
Confidence 4466667776666656 556789998864
No 178
>2pq5_A Dual specificity protein phosphatase 13; hydrolase, dual specificity phosphatase, DUSP13, testis and skeletal muscle specific DSP; 2.30A {Homo sapiens} PDB: 2gwo_A
Probab=20.01 E-value=1.9e+02 Score=18.78 Aligned_cols=28 Identities=21% Similarity=0.336 Sum_probs=18.2
Q ss_pred HHHHHHHHHHH-hCCcEEEEccCCCCccC
Q psy8974 32 KKIKVLSEWID-KAKHVVLHTGAGISTSA 59 (79)
Q Consensus 32 ~~~~~l~~~l~-~s~~ivvltGAGiSt~s 59 (79)
+.++.+.+.+. ..+.|+|.+-||+|.++
T Consensus 118 ~~~~fI~~~l~~~~~~VLVHC~aG~sRS~ 146 (205)
T 2pq5_A 118 PVARYIRAALSVPQGRVLVHCAMGVSRSA 146 (205)
T ss_dssp HHHHHHHHHHTSTTCCEEEECSSSSSHHH
T ss_pred HHHHHHHHHHhcCCCeEEEECCCCCcHHH
Confidence 33333444444 45789999999998543
Done!