BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8981
(134 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9VYV5|FUT8_DROME Alpha-(1,6)-fucosyltransferase OS=Drosophila melanogaster GN=FucT6
PE=1 SV=1
Length = 619
Score = 176 bits (446), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 79/120 (65%), Positives = 93/120 (77%)
Query: 8 RSLLHVLDTLKARDSFDDWRLKESLDLSDLVQRRLEYLQNPPDCRTARKLVCELNKGCGY 67
RSLL ++ ++ D ++ WR KE+ DLSDLVQRRL +LQNP DC+ ARKLVC+LNKGCGY
Sbjct: 210 RSLLSDMERMRQSDGYEAWRHKEARDLSDLVQRRLHHLQNPSDCQNARKLVCKLNKGCGY 269
Query: 68 GCQLHHVVYCFIVAYATRRTLILDSKEWSYSRGGWEEVFQPVSKTCTSPEGVSNSGWPGK 127
GCQLHHVVYCFIVAYAT RTLIL S+ W Y +GGWEEVFQPVS +C + WPGK
Sbjct: 270 GCQLHHVVYCFIVAYATERTLILKSRGWRYHKGGWEEVFQPVSNSCHDAGTANTYNWPGK 329
>sp|Q9WTS2|FUT8_MOUSE Alpha-(1,6)-fucosyltransferase OS=Mus musculus GN=Fut8 PE=2 SV=2
Length = 575
Score = 165 bits (418), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 74/120 (61%), Positives = 91/120 (75%)
Query: 8 RSLLHVLDTLKARDSFDDWRLKESLDLSDLVQRRLEYLQNPPDCRTARKLVCELNKGCGY 67
RS++ L L D DWR KE+ DL++LVQRR+ YLQNP DC ARKLVC +NKGCGY
Sbjct: 161 RSIMTDLYYLSQTDGAGDWREKEAKDLTELVQRRITYLQNPKDCSKARKLVCNINKGCGY 220
Query: 68 GCQLHHVVYCFIVAYATRRTLILDSKEWSYSRGGWEEVFQPVSKTCTSPEGVSNSGWPGK 127
GCQLHHVVYCF++AY T+RTLIL+S+ W Y+ GGWE VF+PVS+TCT G+S W G+
Sbjct: 221 GCQLHHVVYCFMIAYGTQRTLILESQNWRYATGGWETVFRPVSETCTDRSGLSTGHWSGE 280
>sp|Q6EV76|FUT8_RAT Alpha-(1,6)-fucosyltransferase OS=Rattus norvegicus GN=Fut8 PE=2
SV=1
Length = 575
Score = 165 bits (417), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 74/120 (61%), Positives = 91/120 (75%)
Query: 8 RSLLHVLDTLKARDSFDDWRLKESLDLSDLVQRRLEYLQNPPDCRTARKLVCELNKGCGY 67
RS++ L L D DWR KE+ DL++LVQRR+ YLQNP DC ARKLVC +NKGCGY
Sbjct: 161 RSIMTDLYYLSQTDGAGDWREKEAKDLTELVQRRITYLQNPKDCSKARKLVCNINKGCGY 220
Query: 68 GCQLHHVVYCFIVAYATRRTLILDSKEWSYSRGGWEEVFQPVSKTCTSPEGVSNSGWPGK 127
GCQLHHVVYCF++AY T+RTLIL+S+ W Y+ GGWE VF+PVS+TCT G+S W G+
Sbjct: 221 GCQLHHVVYCFMIAYGTQRTLILESQNWRYATGGWETVFRPVSETCTDRSGLSTGHWSGE 280
>sp|Q6EV77|FUT8_PANTR Alpha-(1,6)-fucosyltransferase OS=Pan troglodytes GN=FUT8 PE=2 SV=1
Length = 575
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 73/120 (60%), Positives = 91/120 (75%)
Query: 8 RSLLHVLDTLKARDSFDDWRLKESLDLSDLVQRRLEYLQNPPDCRTARKLVCELNKGCGY 67
RS++ L L D DWR KE+ DL++LVQRR+ YLQNP DC A+KLVC +NKGCGY
Sbjct: 161 RSIMTDLYYLSQTDGAGDWREKEAKDLTELVQRRITYLQNPKDCSKAKKLVCNINKGCGY 220
Query: 68 GCQLHHVVYCFIVAYATRRTLILDSKEWSYSRGGWEEVFQPVSKTCTSPEGVSNSGWPGK 127
GCQLHHVVYCF++AY T+RTLIL+S+ W Y+ GGWE VF+PVS+TCT G+S W G+
Sbjct: 221 GCQLHHVVYCFMIAYGTQRTLILESQNWRYATGGWETVFRPVSETCTDRSGISTGHWSGE 280
>sp|Q9BYC5|FUT8_HUMAN Alpha-(1,6)-fucosyltransferase OS=Homo sapiens GN=FUT8 PE=1 SV=2
Length = 575
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 73/120 (60%), Positives = 91/120 (75%)
Query: 8 RSLLHVLDTLKARDSFDDWRLKESLDLSDLVQRRLEYLQNPPDCRTARKLVCELNKGCGY 67
RS++ L L D DWR KE+ DL++LVQRR+ YLQNP DC A+KLVC +NKGCGY
Sbjct: 161 RSIMTDLYYLSQTDGAGDWREKEAKDLTELVQRRITYLQNPKDCSKAKKLVCNINKGCGY 220
Query: 68 GCQLHHVVYCFIVAYATRRTLILDSKEWSYSRGGWEEVFQPVSKTCTSPEGVSNSGWPGK 127
GCQLHHVVYCF++AY T+RTLIL+S+ W Y+ GGWE VF+PVS+TCT G+S W G+
Sbjct: 221 GCQLHHVVYCFMIAYGTQRTLILESQNWRYATGGWETVFRPVSETCTDRSGISTGHWSGE 280
>sp|Q5NVB3|FUT8_PONAB Alpha-(1,6)-fucosyltransferase OS=Pongo abelii GN=FUT8 PE=2 SV=1
Length = 574
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 73/120 (60%), Positives = 91/120 (75%)
Query: 8 RSLLHVLDTLKARDSFDDWRLKESLDLSDLVQRRLEYLQNPPDCRTARKLVCELNKGCGY 67
RS++ L L D DWR KE+ DL++LVQRR+ YLQNP DC A+KLVC +NKGCGY
Sbjct: 161 RSIMTDLYYLSQTDGAGDWREKEAKDLTELVQRRITYLQNPKDCSKAKKLVCNINKGCGY 220
Query: 68 GCQLHHVVYCFIVAYATRRTLILDSKEWSYSRGGWEEVFQPVSKTCTSPEGVSNSGWPGK 127
GCQLHHVVYCF++AY T+RTLIL+S+ W Y+ GGWE VF+PVS+TCT G+S W G+
Sbjct: 221 GCQLHHVVYCFMIAYGTQRTLILESQNWRYATGGWETVFRPVSETCTDRSGISTGHWSGE 280
>sp|Q6NVP8|FUT8_XENTR Alpha-(1,6)-fucosyltransferase OS=Xenopus tropicalis GN=fut8 PE=2
SV=1
Length = 578
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 73/121 (60%), Positives = 90/121 (74%)
Query: 8 RSLLHVLDTLKARDSFDDWRLKESLDLSDLVQRRLEYLQNPPDCRTARKLVCELNKGCGY 67
RS++ L L D DWR +E+ DL+DLVQRR+ YLQNP DC A+KLVC +NKGCGY
Sbjct: 164 RSVMTDLYYLSQTDGAGDWREREAKDLTDLVQRRITYLQNPKDCSKAKKLVCNINKGCGY 223
Query: 68 GCQLHHVVYCFIVAYATRRTLILDSKEWSYSRGGWEEVFQPVSKTCTSPEGVSNSGWPGK 127
GCQLHHVVYCF++AY T+RTLIL+S+ W Y+ GGWE VF+PVS+TCT G S W G+
Sbjct: 224 GCQLHHVVYCFMIAYGTQRTLILESQSWRYATGGWETVFKPVSETCTDRSGSSTGHWSGE 283
Query: 128 G 128
Sbjct: 284 A 284
>sp|Q659X0|FUT8_CANFA Alpha-(1,6)-fucosyltransferase OS=Canis familiaris GN=FUT8 PE=2
SV=1
Length = 575
Score = 162 bits (410), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 72/120 (60%), Positives = 90/120 (75%)
Query: 8 RSLLHVLDTLKARDSFDDWRLKESLDLSDLVQRRLEYLQNPPDCRTARKLVCELNKGCGY 67
RS++ L L D DWR KE+ DL++LVQRR+ YLQNP DC A+KLVC +NKGCGY
Sbjct: 161 RSIMTDLYYLSQTDGAGDWREKEAKDLTELVQRRITYLQNPKDCSKAKKLVCNINKGCGY 220
Query: 68 GCQLHHVVYCFIVAYATRRTLILDSKEWSYSRGGWEEVFQPVSKTCTSPEGVSNSGWPGK 127
GCQLHHVVYCF++AY T+RTLIL+S+ W Y+ GGWE VF+PV++TCT G S W G+
Sbjct: 221 GCQLHHVVYCFMIAYGTQRTLILESQNWRYATGGWETVFRPVNETCTDRSGTSTGHWSGE 280
>sp|Q9N0W2|FUT8_BOVIN Alpha-(1,6)-fucosyltransferase OS=Bos taurus GN=FUT8 PE=2 SV=1
Length = 575
Score = 162 bits (410), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 73/120 (60%), Positives = 89/120 (74%)
Query: 8 RSLLHVLDTLKARDSFDDWRLKESLDLSDLVQRRLEYLQNPPDCRTARKLVCELNKGCGY 67
RS++ L L D DWR KE+ DL++LVQRR+ YLQNP DC A+KLVC +NKGCGY
Sbjct: 161 RSIMTDLYYLSQTDGAGDWREKEAKDLTELVQRRITYLQNPKDCSKAKKLVCNINKGCGY 220
Query: 68 GCQLHHVVYCFIVAYATRRTLILDSKEWSYSRGGWEEVFQPVSKTCTSPEGVSNSGWPGK 127
GCQLHHVVYCF++AY T+RTLIL+S W Y+ GGWE VF+PVS+TCT GV W G+
Sbjct: 221 GCQLHHVVYCFMIAYGTQRTLILESHNWRYATGGWETVFRPVSETCTDRSGVYTGHWSGE 280
>sp|P79282|FUT8_PIG Alpha-(1,6)-fucosyltransferase OS=Sus scrofa GN=FUT8 PE=1 SV=1
Length = 575
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 72/120 (60%), Positives = 88/120 (73%)
Query: 8 RSLLHVLDTLKARDSFDDWRLKESLDLSDLVQRRLEYLQNPPDCRTARKLVCELNKGCGY 67
RS++ L L D DWR KE+ DL++LVQRR+ YLQNP DC A+KLVC +NKGCGY
Sbjct: 161 RSIMTDLYYLSQTDGAGDWREKEAKDLTELVQRRITYLQNPKDCSKAKKLVCNINKGCGY 220
Query: 68 GCQLHHVVYCFIVAYATRRTLILDSKEWSYSRGGWEEVFQPVSKTCTSPEGVSNSGWPGK 127
GCQLHHVVYCF++AY T+RTL L+S W Y+ GGWE VF+PVS+TCT G S W G+
Sbjct: 221 GCQLHHVVYCFMIAYGTQRTLALESHNWRYATGGWETVFRPVSETCTDRSGSSTGHWSGE 280
>sp|Q8BLR5|PSD4_MOUSE PH and SEC7 domain-containing protein 4 OS=Mus musculus GN=Psd4
PE=2 SV=1
Length = 1005
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 48/110 (43%), Gaps = 3/110 (2%)
Query: 26 WRLKESLDLSDLVQRRLEYLQNPPDCRTARKLVCELNKGCGYGCQLHHVVYCFIVAYATR 85
W + S LSDL Q LE LQ R+ L+ + GC V+C + + ++
Sbjct: 348 WGSQTSQSLSDLTQPILEDLQREDPSRSQETLISQNRGERDAGC-FQEPVFCTLAPWGSQ 406
Query: 86 RTLILDSKEWSYSRGGWEEVFQPVSKTCTSPEGVSNS-GWPGKGMWLLLK 134
+L+ + S RG + PVS +SP + +S WP LL K
Sbjct: 407 TSLLEPNCPESEGRGSGPQP-SPVSSQDSSPRVLLHSPKWPQDASHLLQK 455
>sp|P41557|RPOB1_METVS DNA-directed RNA polymerase subunit B' OS=Methanococcus vannielii
(strain SB / ATCC 35089 / DSM 1224) GN=rpoB1 PE=3 SV=2
Length = 611
Score = 31.6 bits (70), Expect = 1.4, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Query: 25 DWRLKESLDLSDLVQRRLEYLQNPPDCRTARKLVCELNKGCGYGCQLHHVV 75
+W L+ +L+ E + D +T RKL CE+ G Y +LHH+V
Sbjct: 436 EWALRHALENYGFTHSGKETMY---DGKTGRKLECEIFVGVAYYQKLHHLV 483
>sp|Q6MD15|TDH_PARUW L-threonine 3-dehydrogenase OS=Protochlamydia amoebophila (strain
UWE25) GN=tdh PE=3 SV=1
Length = 342
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 5/30 (16%)
Query: 49 PDCRTARKLVCELNKGCGYGCQLHHVVYCF 78
P+CR RK VC KG GY H+ CF
Sbjct: 98 PNCRMGRKHVCMHTKGLGY-----HISGCF 122
>sp|Q9FY74|CMTA1_ARATH Calmodulin-binding transcription activator 1 OS=Arabidopsis
thaliana GN=CMTA1 PE=2 SV=2
Length = 1007
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 20/36 (55%)
Query: 2 EIAPVFRSLLHVLDTLKARDSFDDWRLKESLDLSDL 37
E PV + L D+LK DSF W +KE ++ DL
Sbjct: 341 EYMPVMKILRRSEDSLKKVDSFSKWAIKELGEMEDL 376
>sp|Q968Y9|INSR_CAEEL Insulin-like receptor OS=Caenorhabditis elegans GN=daf-2 PE=1 SV=2
Length = 1846
Score = 29.6 bits (65), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Query: 44 YLQNPPDCRTARKLVCELNKGCGYGCQLHHVVYCFIVAYATRRTLILD 91
Y NP D R RK V + C C+++HV+ F A A R I+D
Sbjct: 473 YQINPDDHRECRKCVGK----CEIVCEINHVIDTFPKAQAIRLCNIID 516
>sp|Q9V251|SYN_PYRAB Asparagine--tRNA ligase OS=Pyrococcus abyssi (strain GE5 / Orsay)
GN=asnS PE=3 SV=1
Length = 434
Score = 29.6 bits (65), Expect = 6.2, Method: Composition-based stats.
Identities = 12/25 (48%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
Query: 85 RRTLILDSKEWSYSRGGWEEVFQPV 109
+ TLI+ ++EW R GW EVF P+
Sbjct: 138 KETLIMAAREWLL-REGWHEVFPPI 161
>sp|F2GA29|RLMD_ALTMD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD OS=Alteromonas
macleodii (strain DSM 17117 / Deep ecotype) GN=rlmD PE=3
SV=1
Length = 482
Score = 29.3 bits (64), Expect = 6.5, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Query: 45 LQNPPDCRTARKLVCELNKGCGYGCQLHHVVYCFIVAYATRRTLILDSKEWSYSRGGWE 103
+Q P + R + C + + CG GCQL H+ +AY I+ ++ S G W+
Sbjct: 109 IQGPSELR--QPPFCPVFEACG-GCQLQHIDADAALAYRDNALKIMMERQLSIGSGVWQ 164
>sp|O53472|Y2026_MYCTU Universal stress protein Rv2026c/MT2085 OS=Mycobacterium
tuberculosis GN=Rv2026c PE=2 SV=1
Length = 294
Score = 29.3 bits (64), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 25 DWRLKESLDLSDLVQRRLEYLQNPPDCRTARKLVCE 60
DWR +E + L +R + + PD R R LVC+
Sbjct: 207 DWREREKREAEVLAERLAGWQEQYPDVRVHRSLVCD 242
>sp|P75067|Y047_MYCPN Uncharacterized protein MG037 homolog OS=Mycoplasma pneumoniae
(strain ATCC 29342 / M129) GN=MPN_047 PE=3 SV=1
Length = 451
Score = 29.3 bits (64), Expect = 8.0, Method: Composition-based stats.
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Query: 21 DSFDDWRLKESL--DLSDLVQRRLEYLQNPPDCRTARKLVCE 60
DS+D W + +++ L DLV +R E L PD L+C+
Sbjct: 280 DSYDMWHVLDNILPQLKDLVLQRQEKLYLRPDSGNFETLICQ 321
>sp|Q8R5Y4|TRMD_FUSNN tRNA (guanine-N(1)-)-methyltransferase OS=Fusobacterium nucleatum
subsp. nucleatum (strain ATCC 25586 / CIP 101130 / JCM
8532 / LMG 13131) GN=trmD PE=3 SV=1
Length = 238
Score = 28.9 bits (63), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Query: 22 SFDDWRLKESLDLSDLVQRRLEYLQNPPDCRTARKLVCELNK 63
D+WRLKESL + L RR E ++N + +KL+ E+ K
Sbjct: 196 KIDEWRLKESLRRTYL--RRRELIENRELTKLEKKLLDEIKK 235
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.138 0.457
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,880,382
Number of Sequences: 539616
Number of extensions: 2095561
Number of successful extensions: 4095
Number of sequences better than 100.0: 20
Number of HSP's better than 100.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 4082
Number of HSP's gapped (non-prelim): 20
length of query: 134
length of database: 191,569,459
effective HSP length: 100
effective length of query: 34
effective length of database: 137,607,859
effective search space: 4678667206
effective search space used: 4678667206
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)