BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8984
(72 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 46.6 bits (109), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 1 MDTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPR 60
+DTE VEV W E+Q +RK K++ ++ ++ E L L+HPNIV+F+ W T K
Sbjct: 46 LDTETTVEVAWCELQ--DRKLTKSERQRFKEEAEXLKGLQHPNIVRFYDSWESTVKGKKC 103
Query: 61 ARFLGEYEETPT 72
+ E + T
Sbjct: 104 IVLVTELXTSGT 115
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 31.6 bits (70), Expect = 0.12, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 5 EGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFH 48
+GV V +VQ + + KA+ + I+++ + L QL HPN++K++
Sbjct: 56 DGVPVALKKVQIFDLMDAKARADCIKEI-DLLKQLNHPNVIKYY 98
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 30.0 bits (66), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 27 EKIQQVFENLTQLEHPNIVKFHRYWTDTHN 56
E+I+ E L L+HPNI+K + D HN
Sbjct: 65 EQIEAEIEVLKSLDHPNIIKIFEVFEDYHN 94
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 29.6 bits (65), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 22/38 (57%)
Query: 21 NFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDK 58
N + EK+ + + L +LEHP IV++ W +T +K
Sbjct: 43 NRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEK 80
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 28.5 bits (62), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 10/21 (47%), Positives = 15/21 (71%)
Query: 36 LTQLEHPNIVKFHRYWTDTHN 56
L QL+HPNI+K + ++ D N
Sbjct: 58 LKQLDHPNIMKLYEFFEDKRN 78
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 28.1 bits (61), Expect = 1.2, Method: Composition-based stats.
Identities = 10/21 (47%), Positives = 15/21 (71%)
Query: 36 LTQLEHPNIVKFHRYWTDTHN 56
L QL+HPNI+K + ++ D N
Sbjct: 75 LKQLDHPNIMKLYEFFEDKRN 95
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 28.1 bits (61), Expect = 1.3, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 20/31 (64%)
Query: 23 KAQEEKIQQVFENLTQLEHPNIVKFHRYWTD 53
K +E + + + L QL+HPNI+K + ++ D
Sbjct: 91 KTDKESLLREVQLLKQLDHPNIMKLYEFFED 121
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 28.1 bits (61), Expect = 1.4, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 20/31 (64%)
Query: 23 KAQEEKIQQVFENLTQLEHPNIVKFHRYWTD 53
K +E + + + L QL+HPNI+K + ++ D
Sbjct: 90 KTDKESLLREVQLLKQLDHPNIMKLYEFFED 120
>pdb|2RKB|A Chain A, Serine Dehydratase Like-1 From Human Cancer Cells
pdb|2RKB|B Chain B, Serine Dehydratase Like-1 From Human Cancer Cells
pdb|2RKB|C Chain C, Serine Dehydratase Like-1 From Human Cancer Cells
pdb|2RKB|D Chain D, Serine Dehydratase Like-1 From Human Cancer Cells
pdb|2RKB|E Chain E, Serine Dehydratase Like-1 From Human Cancer Cells
Length = 318
Score = 28.1 bits (61), Expect = 1.4, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 11/49 (22%)
Query: 5 EGVEV-----VWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFH 48
EG EV VW+E N +AQE + +EN+ +HP I K H
Sbjct: 99 EGAEVQLTGKVWDEA------NLRAQELAKRDGWENVPPFDHPLIWKGH 141
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma
Gondii (Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma
Gondii (Tgcdpk1) In Complex With Bumped Kinase
Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma
Gondii (Tgcdpk1) In Complex With Bumped Kinase
Inhibitor Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma
Gondii (Tgcdpk1) In Complex With Bumped Kinase
Inhibitor, Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma
Gondii (Tgcdpk1) In Complex With Bumped Kinase
Inhibitor, Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma
Gondii (Tgcdpk1) In Complex With Bumped Kinase
Inhibitor, Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma
Gondii (Tgcdpk1) In Complex With Bumped Kinase
Inhibitor, Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma
Gondii (Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma
Gondii (Tgcdpk1) In Complex With Bumpless Bki Analog
Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma
Gondii (Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma
Gondii (Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma
Gondii (Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 28.1 bits (61), Expect = 1.5, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 20/31 (64%)
Query: 23 KAQEEKIQQVFENLTQLEHPNIVKFHRYWTD 53
K +E + + + L QL+HPNI+K + ++ D
Sbjct: 67 KTDKESLLREVQLLKQLDHPNIMKLYEFFED 97
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 28.1 bits (61), Expect = 1.5, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 20/31 (64%)
Query: 23 KAQEEKIQQVFENLTQLEHPNIVKFHRYWTD 53
K +E + + + L QL+HPNI+K + ++ D
Sbjct: 73 KTDKESLLREVQLLKQLDHPNIMKLYEFFED 103
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 27.3 bits (59), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 11/33 (33%), Positives = 19/33 (57%)
Query: 21 NFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTD 53
N + EK+ + + L +LEHP IV++ W +
Sbjct: 42 NRELAREKVMREVKALAKLEHPGIVRYFNAWLE 74
>pdb|2JAK|A Chain A, Human Pp2a Regulatory Subunit B56g
Length = 392
Score = 26.9 bits (58), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Query: 29 IQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEET 70
+ Q E + L P ++ +YW TH+ K FL E EE
Sbjct: 283 VVQFLEKDSTLTEPVVMALLKYWPKTHSPK-EVMFLNELEEI 323
>pdb|2NPP|B Chain B, Structure Of The Protein Phosphatase 2a Holoenzyme
pdb|2NPP|E Chain E, Structure Of The Protein Phosphatase 2a Holoenzyme
Length = 449
Score = 26.9 bits (58), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Query: 29 IQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEET 70
+ Q E + L P ++ +YW TH+ K FL E EE
Sbjct: 271 VVQFLEKDSTLTEPVVMALLKYWPKTHSPK-EVMFLNELEEI 311
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma
Gondii (Tgcdpk1) In Complex With Bumped Kinase
Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma
Gondii (Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 26.9 bits (58), Expect = 2.9, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 19/31 (61%)
Query: 23 KAQEEKIQQVFENLTQLEHPNIVKFHRYWTD 53
K +E + + + L QL+HPNI K + ++ D
Sbjct: 67 KTDKESLLREVQLLKQLDHPNIXKLYEFFED 97
>pdb|3FGA|B Chain B, Structural Basis Of Pp2a And Sgo Interaction
Length = 403
Score = 26.9 bits (58), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Query: 29 IQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEET 70
+ Q E + L P ++ +YW TH+ K FL E EE
Sbjct: 238 VVQFLEKDSTLTEPVVMALLKYWPKTHSPK-EVMFLNELEEI 278
>pdb|2IAE|B Chain B, Crystal Structure Of A Protein Phosphatase 2a (Pp2a)
Holoenzyme.
pdb|2IAE|E Chain E, Crystal Structure Of A Protein Phosphatase 2a (Pp2a)
Holoenzyme
Length = 407
Score = 26.9 bits (58), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Query: 29 IQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEET 70
+ Q E + L P ++ +YW TH+ K FL E EE
Sbjct: 242 VVQFLEKDSTLTEPVVMALLKYWPKTHSPK-EVMFLNELEEI 282
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 26.9 bits (58), Expect = 3.2, Method: Composition-based stats.
Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 5 EGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHN 56
+G +VW E+ + +A+++ + L +L+HPNIV+++ D N
Sbjct: 30 DGKILVWKELDYGSMT--EAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTN 79
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 26.6 bits (57), Expect = 3.5, Method: Composition-based stats.
Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 5 EGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHN 56
+G +VW E+ + +A+++ + L +L+HPNIV+++ D N
Sbjct: 30 DGKILVWKELDYGSMT--EAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTN 79
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 26.6 bits (57), Expect = 3.6, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Query: 14 VQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRY-WTDTH 55
V++ ER A +E +Q+ N L HPNIV+F T TH
Sbjct: 50 VKYIERG--AAIDENVQREIINHRSLRHPNIVRFKEVILTPTH 90
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 26.6 bits (57), Expect = 4.1, Method: Composition-based stats.
Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 5 EGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHN 56
+G +VW E+ + +A+++ + L +L+HPNIV+++ D N
Sbjct: 30 DGKILVWKELDYGSMT--EAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTN 79
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
A 5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With
A 5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 26.2 bits (56), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 6/39 (15%)
Query: 22 FKAQEEK------IQQVFENLTQLEHPNIVKFHRYWTDT 54
FKAQ EK +++ E + L HPNI++ + Y+ D
Sbjct: 47 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA 85
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase
By A Novel Class Of High Affinity Disubstituted
Pyrimidine Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target
Kinase Selectivity
Length = 272
Score = 26.2 bits (56), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 6/39 (15%)
Query: 22 FKAQEEK------IQQVFENLTQLEHPNIVKFHRYWTDT 54
FKAQ EK +++ E + L HPNI++ + Y+ D
Sbjct: 46 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA 84
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 26.2 bits (56), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 6/39 (15%)
Query: 22 FKAQEEK------IQQVFENLTQLEHPNIVKFHRYWTDT 54
FKAQ EK +++ E + L HPNI++ + Y+ D
Sbjct: 47 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA 85
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 26.2 bits (56), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 6/39 (15%)
Query: 22 FKAQEEK------IQQVFENLTQLEHPNIVKFHRYWTDT 54
FKAQ EK +++ E + L HPNI++ + Y+ D
Sbjct: 42 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA 80
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 26.2 bits (56), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 6/39 (15%)
Query: 22 FKAQEEK------IQQVFENLTQLEHPNIVKFHRYWTDT 54
FKAQ EK +++ E + L HPNI++ + Y+ D
Sbjct: 44 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA 82
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 26.2 bits (56), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 10/57 (17%)
Query: 22 FKAQEEK------IQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72
FKAQ EK +++ E + L HPNI++ + Y+ +D R + EY T
Sbjct: 39 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF----HDATRVYLILEYAPLGT 91
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 26.2 bits (56), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 10/57 (17%)
Query: 22 FKAQEEK------IQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72
FKAQ EK +++ E + L HPNI++ + Y+ +D R + EY T
Sbjct: 45 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF----HDATRVYLILEYAPLGT 97
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 26.2 bits (56), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 6/39 (15%)
Query: 22 FKAQEEK------IQQVFENLTQLEHPNIVKFHRYWTDT 54
FKAQ EK +++ E + L HPNI++ + Y+ D
Sbjct: 68 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA 106
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 26.2 bits (56), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 6/39 (15%)
Query: 22 FKAQEEK------IQQVFENLTQLEHPNIVKFHRYWTDT 54
FKAQ EK +++ E + L HPNI++ + Y+ D
Sbjct: 42 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA 80
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 26.2 bits (56), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 6/39 (15%)
Query: 22 FKAQEEK------IQQVFENLTQLEHPNIVKFHRYWTDT 54
FKAQ EK +++ E + L HPNI++ + Y+ D
Sbjct: 47 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA 85
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 26.2 bits (56), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 6/39 (15%)
Query: 22 FKAQEEK------IQQVFENLTQLEHPNIVKFHRYWTDT 54
FKAQ EK +++ E + L HPNI++ + Y+ D
Sbjct: 42 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA 80
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 26.2 bits (56), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 6/39 (15%)
Query: 22 FKAQEEK------IQQVFENLTQLEHPNIVKFHRYWTDT 54
FKAQ EK +++ E + L HPNI++ + Y+ D
Sbjct: 43 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA 81
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 26.2 bits (56), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 6/39 (15%)
Query: 22 FKAQEEK------IQQVFENLTQLEHPNIVKFHRYWTDT 54
FKAQ EK +++ E + L HPNI++ + Y+ D
Sbjct: 43 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA 81
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 26.2 bits (56), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 6/39 (15%)
Query: 22 FKAQEEK------IQQVFENLTQLEHPNIVKFHRYWTDT 54
FKAQ EK +++ E + L HPNI++ + Y+ D
Sbjct: 47 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA 85
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 26.2 bits (56), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 6/39 (15%)
Query: 22 FKAQEEK------IQQVFENLTQLEHPNIVKFHRYWTDT 54
FKAQ EK +++ E + L HPNI++ + Y+ D
Sbjct: 43 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA 81
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 26.2 bits (56), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 10/57 (17%)
Query: 22 FKAQEEK------IQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72
FKAQ EK +++ E + L HPNI++ + Y+ +D R + EY T
Sbjct: 45 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF----HDATRVYLILEYAPLGT 97
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 26.2 bits (56), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 6/39 (15%)
Query: 22 FKAQEEK------IQQVFENLTQLEHPNIVKFHRYWTDT 54
FKAQ EK +++ E + L HPNI++ + Y+ D
Sbjct: 42 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA 80
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 26.2 bits (56), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 6/39 (15%)
Query: 22 FKAQEEK------IQQVFENLTQLEHPNIVKFHRYWTDT 54
FKAQ EK +++ E + L HPNI++ + Y+ D
Sbjct: 42 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA 80
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 26.2 bits (56), Expect = 4.6, Method: Composition-based stats.
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 31 QVFENLTQLEHPNIVKFHRYW 51
Q+ ++L L HPNIV+ Y+
Sbjct: 68 QIMQDLAVLHHPNIVQLQSYF 88
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 26.2 bits (56), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 6/39 (15%)
Query: 22 FKAQEEK------IQQVFENLTQLEHPNIVKFHRYWTDT 54
FKAQ EK +++ E + L HPNI++ + Y+ D
Sbjct: 42 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA 80
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 26.2 bits (56), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 6/39 (15%)
Query: 22 FKAQEEK------IQQVFENLTQLEHPNIVKFHRYWTDT 54
FKAQ EK +++ E + L HPNI++ + Y+ D
Sbjct: 42 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA 80
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 26.2 bits (56), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 6/39 (15%)
Query: 22 FKAQEEK------IQQVFENLTQLEHPNIVKFHRYWTDT 54
FKAQ EK +++ E + L HPNI++ + Y+ D
Sbjct: 59 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA 97
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective
Imidazopyrazine Inhibitor
Length = 283
Score = 26.2 bits (56), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 6/39 (15%)
Query: 22 FKAQEEK------IQQVFENLTQLEHPNIVKFHRYWTDT 54
FKAQ EK +++ E + L HPNI++ + Y+ D
Sbjct: 45 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA 83
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 26.2 bits (56), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 6/39 (15%)
Query: 22 FKAQEEK------IQQVFENLTQLEHPNIVKFHRYWTDT 54
FKAQ EK +++ E + L HPNI++ + Y+ D
Sbjct: 45 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA 83
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 26.2 bits (56), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 6/39 (15%)
Query: 22 FKAQEEK------IQQVFENLTQLEHPNIVKFHRYWTDT 54
FKAQ EK +++ E + L HPNI++ + Y+ D
Sbjct: 47 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA 85
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 26.2 bits (56), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 6/39 (15%)
Query: 22 FKAQEEK------IQQVFENLTQLEHPNIVKFHRYWTDT 54
FKAQ EK +++ E + L HPNI++ + Y+ D
Sbjct: 68 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA 106
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 26.2 bits (56), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 6/39 (15%)
Query: 22 FKAQEEK------IQQVFENLTQLEHPNIVKFHRYWTDT 54
FKAQ EK +++ E + L HPNI++ + Y+ D
Sbjct: 44 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA 82
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 26.2 bits (56), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 10/57 (17%)
Query: 22 FKAQEEK------IQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72
FKAQ EK +++ E + L HPNI++ + Y+ +D R + EY T
Sbjct: 41 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF----HDATRVYLILEYAPLGT 93
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 26.2 bits (56), Expect = 5.2, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 6/39 (15%)
Query: 22 FKAQEEK------IQQVFENLTQLEHPNIVKFHRYWTDT 54
FKAQ EK +++ E + L HPNI++ + Y+ D+
Sbjct: 42 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDS 80
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 25.8 bits (55), Expect = 7.0, Method: Composition-based stats.
Identities = 12/45 (26%), Positives = 24/45 (53%)
Query: 9 VVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTD 53
+V +V F + + E ++++ E L HPNI++ + Y+ D
Sbjct: 50 IVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYNYFYD 94
>pdb|2NYL|B Chain B, Crystal Structure Of Protein Phosphatase 2a (Pp2a)
Holoenzyme With The Catalytic Subunit Carboxyl Terminus
Truncated
pdb|2NYL|E Chain E, Crystal Structure Of Protein Phosphatase 2a (Pp2a)
Holoenzyme With The Catalytic Subunit Carboxyl Terminus
Truncated
pdb|2NYM|B Chain B, Crystal Structure Of Protein Phosphatase 2a (Pp2a) With
C-Terminus Truncated Catalytic Subunit
pdb|2NYM|E Chain E, Crystal Structure Of Protein Phosphatase 2a (Pp2a) With
C-Terminus Truncated Catalytic Subunit
Length = 388
Score = 25.8 bits (55), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Query: 29 IQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEET 70
+ Q E + L P + +YW TH+ K FL E EE
Sbjct: 234 VVQFLEKDSTLTEPVVXALLKYWPKTHSPK-EVXFLNELEEI 274
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 25.4 bits (54), Expect = 7.5, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 6/38 (15%)
Query: 22 FKAQEEK------IQQVFENLTQLEHPNIVKFHRYWTD 53
FKAQ EK +++ E + L HPNI++ + Y+ D
Sbjct: 45 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHD 82
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And
Inhibition By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And
Inhibition By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 25.4 bits (54), Expect = 7.8, Method: Composition-based stats.
Identities = 11/41 (26%), Positives = 23/41 (56%)
Query: 13 EVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTD 53
+V F + + E ++++ E + L HPNI++ + Y+ D
Sbjct: 45 KVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHD 85
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 25.4 bits (54), Expect = 7.8, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 6/38 (15%)
Query: 22 FKAQEEK------IQQVFENLTQLEHPNIVKFHRYWTD 53
FKAQ EK +++ E + L HPNI++ + Y+ D
Sbjct: 45 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHD 82
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 25.4 bits (54), Expect = 8.2, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
Query: 29 IQQVFEN---LTQLEHPNIVKFHRYWTDTHND 57
I+QV++ L +L+HPN+VK D + D
Sbjct: 80 IEQVYQEIAILKKLDHPNVVKLVEVLDDPNED 111
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.314 0.131 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,306,623
Number of Sequences: 62578
Number of extensions: 74756
Number of successful extensions: 382
Number of sequences better than 100.0: 67
Number of HSP's better than 100.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 39
Number of HSP's that attempted gapping in prelim test: 353
Number of HSP's gapped (non-prelim): 67
length of query: 72
length of database: 14,973,337
effective HSP length: 42
effective length of query: 30
effective length of database: 12,345,061
effective search space: 370351830
effective search space used: 370351830
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 45 (21.9 bits)