Query psy8984
Match_columns 72
No_of_seqs 221 out of 1351
Neff 10.0
Searched_HMMs 46136
Date Sat Aug 17 00:43:59 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8984.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/8984hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0595|consensus 99.8 6E-20 1.3E-24 110.5 7.6 65 2-72 31-95 (429)
2 KOG0615|consensus 99.8 1.8E-19 3.9E-24 108.9 6.5 68 1-72 192-262 (475)
3 KOG0575|consensus 99.7 5.8E-18 1.3E-22 105.5 7.3 66 2-72 39-104 (592)
4 KOG0581|consensus 99.7 9.2E-18 2E-22 100.0 7.1 66 1-72 99-164 (364)
5 KOG0611|consensus 99.7 1.2E-17 2.6E-22 101.9 4.5 66 2-72 74-139 (668)
6 KOG0600|consensus 99.6 5.6E-16 1.2E-20 95.6 6.7 66 1-70 137-202 (560)
7 KOG0584|consensus 99.6 9.5E-17 2.1E-21 100.5 2.7 70 1-72 60-129 (632)
8 KOG0586|consensus 99.6 1.3E-15 2.7E-20 95.3 7.2 65 2-72 77-141 (596)
9 KOG0032|consensus 99.6 1.6E-15 3.4E-20 92.1 7.4 66 2-72 56-122 (382)
10 KOG0582|consensus 99.6 1.4E-15 3E-20 93.0 6.6 63 3-72 48-110 (516)
11 KOG0585|consensus 99.6 2E-15 4.4E-20 93.0 6.8 70 1-72 117-196 (576)
12 KOG0192|consensus 99.6 3.9E-15 8.5E-20 89.9 7.8 63 5-72 63-126 (362)
13 KOG0588|consensus 99.6 1.2E-15 2.6E-20 96.7 5.7 66 2-72 33-98 (786)
14 KOG1026|consensus 99.6 1.2E-15 2.5E-20 97.9 5.5 61 5-72 515-575 (774)
15 PHA02988 hypothetical protein; 99.6 1.8E-14 3.8E-19 83.9 8.6 68 4-72 41-108 (283)
16 KOG0589|consensus 99.6 6.9E-15 1.5E-19 89.9 7.0 66 2-72 25-90 (426)
17 KOG0194|consensus 99.6 1E-14 2.2E-19 90.3 7.4 59 9-72 189-247 (474)
18 KOG0591|consensus 99.6 6.2E-17 1.3E-21 94.8 -2.4 66 2-72 40-106 (375)
19 KOG0593|consensus 99.6 1.9E-15 4.1E-20 89.4 3.6 64 1-70 22-85 (396)
20 KOG0580|consensus 99.6 6.6E-16 1.4E-20 88.6 1.1 66 2-72 43-108 (281)
21 KOG0583|consensus 99.6 1.3E-14 2.8E-19 87.8 6.6 67 2-72 38-106 (370)
22 KOG0574|consensus 99.6 2.1E-15 4.6E-20 89.6 2.8 62 1-72 53-114 (502)
23 KOG0659|consensus 99.6 4.2E-15 9.1E-20 86.4 4.0 63 2-70 23-85 (318)
24 KOG1187|consensus 99.6 2.2E-14 4.8E-19 86.6 7.0 61 5-72 98-158 (361)
25 cd08227 PK_STRAD_alpha Pseudok 99.6 4.4E-14 9.6E-19 83.4 8.1 65 2-72 21-85 (327)
26 KOG0578|consensus 99.5 3.7E-15 8.1E-20 92.6 3.1 62 3-72 295-356 (550)
27 cd05629 STKc_NDR_like_fungal C 99.5 3.6E-14 7.7E-19 85.3 7.0 66 2-72 22-87 (377)
28 KOG0605|consensus 99.5 2.5E-14 5.4E-19 88.7 6.2 65 3-72 163-227 (550)
29 KOG0197|consensus 99.5 2.3E-14 5E-19 88.2 5.9 56 8-72 232-287 (468)
30 cd05626 STKc_LATS2 Catalytic d 99.5 7.1E-14 1.5E-18 84.2 7.5 66 2-72 22-87 (381)
31 PTZ00263 protein kinase A cata 99.5 4.8E-14 1E-18 83.5 6.5 66 2-72 39-104 (329)
32 cd05599 STKc_NDR_like Catalyti 99.5 4.6E-14 9.9E-19 84.3 6.3 66 2-72 22-87 (364)
33 PLN00034 mitogen-activated pro 99.5 1.1E-13 2.3E-18 82.6 7.8 64 2-72 95-158 (353)
34 cd05105 PTKc_PDGFR_alpha Catal 99.5 1.2E-13 2.5E-18 84.2 8.0 61 5-72 66-127 (400)
35 KOG0663|consensus 99.5 2E-14 4.3E-19 85.9 4.3 66 1-70 96-161 (419)
36 cd05585 STKc_YPK1_like Catalyt 99.5 8.8E-14 1.9E-18 81.8 7.0 66 2-72 14-79 (312)
37 cd05625 STKc_LATS1 Catalytic d 99.5 8.9E-14 1.9E-18 83.7 7.1 66 2-72 22-87 (382)
38 cd05598 STKc_LATS Catalytic do 99.5 6.8E-14 1.5E-18 84.0 6.6 66 2-72 22-87 (376)
39 cd05595 STKc_PKB_beta Catalyti 99.5 9.1E-14 2E-18 82.2 7.0 66 2-72 16-81 (323)
40 KOG4250|consensus 99.5 6.5E-15 1.4E-19 93.5 2.2 68 2-72 34-103 (732)
41 cd05582 STKc_RSK_N N-terminal 99.5 1.1E-13 2.3E-18 81.5 7.1 64 3-72 21-84 (318)
42 KOG0610|consensus 99.5 4.5E-14 9.7E-19 85.8 5.5 65 3-72 99-163 (459)
43 cd06649 PKc_MEK2 Catalytic dom 99.5 2E-13 4.3E-18 80.9 8.1 64 2-72 26-89 (331)
44 cd05612 STKc_PRKX_like Catalyt 99.5 3.7E-14 8E-19 82.6 4.8 66 2-72 22-87 (291)
45 cd05096 PTKc_DDR1 Catalytic do 99.5 2.8E-13 6.1E-18 79.1 8.5 61 5-72 45-105 (304)
46 cd05584 STKc_p70S6K Catalytic 99.5 1.1E-13 2.3E-18 81.8 6.7 66 3-72 21-86 (323)
47 cd05600 STKc_Sid2p_Dbf2p Catal 99.5 1.3E-13 2.9E-18 81.6 7.0 66 2-72 22-87 (333)
48 cd05571 STKc_PKB Catalytic dom 99.5 1.4E-13 3E-18 81.4 7.0 66 2-72 16-81 (323)
49 cd05104 PTKc_Kit Catalytic dom 99.5 8.6E-14 1.9E-18 83.8 6.2 63 3-72 62-125 (375)
50 KOG0598|consensus 99.5 3.6E-14 7.8E-19 84.7 4.4 65 3-72 47-111 (357)
51 cd06650 PKc_MEK1 Catalytic dom 99.5 2.9E-13 6.2E-18 80.4 8.2 64 2-72 26-89 (333)
52 cd05593 STKc_PKB_gamma Catalyt 99.5 1.9E-13 4.2E-18 81.0 7.3 66 2-72 16-81 (328)
53 cd05628 STKc_NDR1 Catalytic do 99.5 1.5E-13 3.3E-18 82.3 6.8 66 2-72 22-87 (363)
54 cd05608 STKc_GRK1 Catalytic do 99.5 2.2E-13 4.8E-18 79.0 7.2 66 2-72 14-79 (280)
55 cd05102 PTKc_VEGFR3 Catalytic 99.5 1.1E-13 2.5E-18 81.8 6.1 63 4-72 35-98 (338)
56 KOG1094|consensus 99.5 3.7E-14 7.9E-19 89.5 3.7 60 6-72 562-621 (807)
57 cd08221 STKc_Nek9 Catalytic do 99.5 7.2E-13 1.6E-17 75.5 8.7 65 2-72 21-85 (256)
58 cd05605 STKc_GRK4_like Catalyt 99.5 3.1E-13 6.7E-18 78.5 7.0 65 3-72 22-86 (285)
59 cd05596 STKc_ROCK Catalytic do 99.5 3.1E-13 6.6E-18 81.4 6.9 66 2-72 64-129 (370)
60 cd05607 STKc_GRK7 Catalytic do 99.5 4.6E-13 9.9E-18 77.5 7.4 66 2-72 14-79 (277)
61 cd06615 PKc_MEK Catalytic doma 99.5 6.9E-13 1.5E-17 77.8 8.2 64 2-72 22-85 (308)
62 KOG0597|consensus 99.5 7.5E-14 1.6E-18 88.0 4.1 62 3-70 24-85 (808)
63 cd06619 PKc_MKK5 Catalytic dom 99.5 1.2E-12 2.5E-17 75.8 8.7 64 2-72 22-85 (279)
64 cd05594 STKc_PKB_alpha Catalyt 99.5 4.6E-13 1E-17 79.1 7.1 66 2-72 16-81 (325)
65 cd06621 PKc_MAPKK_Pek1_like Ca 99.5 1.3E-12 2.7E-17 75.9 8.8 66 2-72 22-87 (287)
66 cd05588 STKc_aPKC Catalytic do 99.4 4.8E-13 1E-17 79.3 7.1 66 2-72 16-82 (329)
67 cd05621 STKc_ROCK2 Catalytic d 99.4 5.1E-13 1.1E-17 80.5 7.3 66 2-72 64-129 (370)
68 cd05064 PTKc_EphR_A10 Catalyti 99.4 7.3E-13 1.6E-17 76.2 7.6 62 4-72 31-92 (266)
69 cd05107 PTKc_PDGFR_beta Cataly 99.4 6.5E-13 1.4E-17 81.0 7.7 62 4-72 65-127 (401)
70 cd05627 STKc_NDR2 Catalytic do 99.4 5.8E-13 1.2E-17 79.7 7.2 66 2-72 22-87 (360)
71 cd05631 STKc_GRK4 Catalytic do 99.4 7.1E-13 1.5E-17 77.0 7.4 66 2-72 21-86 (285)
72 PTZ00267 NIMA-related protein 99.4 1E-12 2.2E-17 81.4 8.4 59 6-72 93-151 (478)
73 cd05084 PTKc_Fes Catalytic dom 99.4 9.2E-13 2E-17 75.0 7.4 64 2-72 16-79 (252)
74 cd08226 PK_STRAD_beta Pseudoki 99.4 1.1E-12 2.4E-17 77.5 7.9 65 2-72 21-85 (328)
75 KOG0201|consensus 99.4 1.6E-14 3.5E-19 88.0 -0.0 65 1-72 33-97 (467)
76 cd06640 STKc_MST4 Catalytic do 99.4 2.5E-12 5.4E-17 74.3 9.0 64 2-72 25-88 (277)
77 cd05106 PTKc_CSF-1R Catalytic 99.4 5.4E-13 1.2E-17 80.4 6.3 62 4-72 66-128 (374)
78 cd07848 STKc_CDKL5 Catalytic d 99.4 4.3E-13 9.3E-18 77.6 5.7 65 2-72 22-86 (287)
79 PTZ00426 cAMP-dependent protei 99.4 9.8E-13 2.1E-17 78.5 7.3 62 6-72 56-117 (340)
80 cd06611 STKc_SLK_like Catalyti 99.4 2.4E-12 5.2E-17 74.3 8.5 62 3-72 27-88 (280)
81 cd08216 PK_STRAD Pseudokinase 99.4 8.9E-13 1.9E-17 77.2 6.7 64 3-72 22-85 (314)
82 KOG0198|consensus 99.4 8.9E-13 1.9E-17 78.4 6.6 64 3-72 39-102 (313)
83 cd06620 PKc_MAPKK_Byr1_like Ca 99.4 2E-12 4.4E-17 74.9 8.0 63 3-72 27-89 (284)
84 cd05580 STKc_PKA Catalytic dom 99.4 1.4E-12 3E-17 75.8 7.2 66 2-72 22-87 (290)
85 cd08228 STKc_Nek6 Catalytic do 99.4 2.7E-12 5.9E-17 73.5 8.3 65 3-72 24-88 (267)
86 KOG0577|consensus 99.4 5.3E-14 1.1E-18 89.2 1.2 66 1-71 46-111 (948)
87 cd05597 STKc_DMPK_like Catalyt 99.4 1.2E-12 2.5E-17 77.7 6.8 66 2-72 22-87 (331)
88 cd05622 STKc_ROCK1 Catalytic d 99.4 1.3E-12 2.7E-17 78.8 7.0 66 2-72 64-129 (371)
89 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 99.4 3.4E-12 7.4E-17 73.8 8.6 65 2-72 29-93 (284)
90 cd06641 STKc_MST3 Catalytic do 99.4 3.5E-12 7.7E-17 73.6 8.5 63 3-72 26-88 (277)
91 cd08224 STKc_Nek6_Nek7 Catalyt 99.4 2.3E-12 5E-17 73.6 7.7 65 3-72 24-88 (267)
92 cd08529 STKc_FA2-like Catalyti 99.4 2.4E-12 5.2E-17 73.2 7.6 64 3-72 22-85 (256)
93 cd08219 STKc_Nek3 Catalytic do 99.4 3.9E-12 8.5E-17 72.5 8.5 64 2-72 21-84 (255)
94 cd05601 STKc_CRIK Catalytic do 99.4 1.2E-12 2.6E-17 77.4 6.5 66 2-72 22-87 (330)
95 cd05589 STKc_PKN Catalytic dom 99.4 1.3E-12 2.8E-17 77.2 6.6 66 2-72 20-88 (324)
96 cd05103 PTKc_VEGFR2 Catalytic 99.4 1.3E-12 2.8E-17 77.8 6.6 63 4-72 35-98 (343)
97 PF07714 Pkinase_Tyr: Protein 99.4 1.6E-12 3.5E-17 74.7 6.7 63 3-72 25-87 (259)
98 cd05575 STKc_SGK Catalytic dom 99.4 1.7E-12 3.7E-17 76.7 7.0 66 2-72 16-82 (323)
99 cd07871 STKc_PCTAIRE3 Catalyti 99.4 1.5E-12 3.2E-17 75.8 6.6 62 2-70 26-87 (288)
100 cd05087 PTKc_Aatyk1_Aatyk3 Cat 99.4 2.6E-12 5.6E-17 73.9 7.6 62 4-72 20-81 (269)
101 cd07869 STKc_PFTAIRE1 Catalyti 99.4 1.4E-12 3.1E-17 76.2 6.5 63 2-71 26-88 (303)
102 cd05573 STKc_ROCK_NDR_like Cat 99.4 6.8E-13 1.5E-17 78.7 5.2 66 2-72 22-87 (350)
103 KOG0616|consensus 99.4 5.3E-13 1.1E-17 78.7 4.6 66 2-72 65-130 (355)
104 cd05618 STKc_aPKC_iota Catalyt 99.4 2.2E-12 4.8E-17 76.5 7.3 66 2-72 16-82 (329)
105 cd06642 STKc_STK25-YSK1 Cataly 99.4 1.3E-12 2.9E-17 75.3 6.2 64 2-72 25-88 (277)
106 KOG0196|consensus 99.4 8.2E-13 1.8E-17 85.4 5.7 59 7-72 658-716 (996)
107 cd06625 STKc_MEKK3_like Cataly 99.4 4E-12 8.8E-17 72.6 8.1 67 2-72 23-90 (263)
108 KOG0662|consensus 99.4 2.6E-13 5.6E-18 76.1 3.1 62 2-69 23-84 (292)
109 KOG1989|consensus 99.4 1E-12 2.2E-17 84.6 6.1 66 3-72 59-128 (738)
110 cd06622 PKc_MAPKK_PBS2_like Ca 99.4 1.4E-12 3E-17 75.5 6.0 63 3-72 23-85 (286)
111 KOG1095|consensus 99.4 1.4E-12 3.1E-17 86.1 6.6 59 7-72 723-781 (1025)
112 cd05080 PTKc_Tyk2_rpt2 Catalyt 99.4 5.6E-12 1.2E-16 72.9 8.4 64 4-72 31-94 (283)
113 cd06645 STKc_MAP4K3 Catalytic 99.4 6E-12 1.3E-16 72.2 8.3 63 2-72 30-92 (267)
114 PRK13184 pknD serine/threonine 99.4 3.4E-12 7.4E-17 84.1 8.1 66 2-72 23-88 (932)
115 KOG0033|consensus 99.4 4.4E-14 9.5E-19 82.0 -0.5 65 2-72 32-96 (355)
116 cd08218 STKc_Nek1 Catalytic do 99.4 5E-12 1.1E-16 72.0 7.9 64 3-72 22-85 (256)
117 PTZ00266 NIMA-related protein 99.4 4.8E-12 1E-16 83.9 8.6 67 2-72 34-100 (1021)
118 KOG0661|consensus 99.4 5.4E-14 1.2E-18 86.6 -0.3 62 3-70 32-94 (538)
119 cd05577 STKc_GRK Catalytic dom 99.4 4.2E-12 9.1E-17 73.3 7.4 66 2-72 14-79 (277)
120 cd05603 STKc_SGK2 Catalytic do 99.4 2.7E-12 5.8E-17 75.7 6.7 66 2-72 16-82 (321)
121 cd06646 STKc_MAP4K5 Catalytic 99.4 6E-12 1.3E-16 72.2 8.0 62 3-72 31-92 (267)
122 cd05076 PTK_Tyk2_rpt1 Pseudoki 99.4 4.2E-12 9E-17 73.5 7.4 59 6-72 44-102 (274)
123 cd05578 STKc_Yank1 Catalytic d 99.4 1.1E-12 2.5E-17 74.8 4.9 66 2-72 21-86 (258)
124 cd08217 STKc_Nek2 Catalytic do 99.4 5.8E-12 1.2E-16 71.7 7.8 67 2-72 21-87 (265)
125 cd05570 STKc_PKC Catalytic dom 99.4 2.8E-12 6E-17 75.7 6.6 66 2-72 16-82 (318)
126 KOG4717|consensus 99.4 2.2E-12 4.8E-17 81.1 6.4 64 3-72 40-103 (864)
127 cd05604 STKc_SGK3 Catalytic do 99.4 3.9E-12 8.4E-17 75.2 7.1 66 2-72 16-82 (325)
128 cd05609 STKc_MAST Catalytic do 99.4 5.4E-12 1.2E-16 73.9 7.6 65 3-72 23-87 (305)
129 cd05572 STKc_cGK_PKG Catalytic 99.4 4.7E-12 1E-16 72.4 7.1 65 3-72 15-79 (262)
130 cd06624 STKc_ASK Catalytic dom 99.4 7.7E-12 1.7E-16 71.8 8.0 63 2-72 29-91 (268)
131 cd05591 STKc_nPKC_epsilon Cata 99.4 3.7E-12 8E-17 75.2 6.8 66 2-72 16-82 (321)
132 cd05630 STKc_GRK6 Catalytic do 99.4 7.8E-12 1.7E-16 72.7 8.1 66 2-72 21-86 (285)
133 cd05590 STKc_nPKC_eta Catalyti 99.4 2.2E-12 4.9E-17 76.2 5.9 66 2-72 16-82 (320)
134 cd06609 STKc_MST3_like Catalyt 99.4 9.2E-12 2E-16 71.7 8.3 64 2-72 22-85 (274)
135 KOG0607|consensus 99.4 1.4E-13 3E-18 82.3 0.7 63 2-72 99-162 (463)
136 cd06630 STKc_MEKK1 Catalytic d 99.4 4.4E-12 9.6E-17 72.6 6.9 67 2-72 21-89 (268)
137 cd05090 PTKc_Ror1 Catalytic do 99.4 8.5E-12 1.8E-16 72.2 8.1 62 4-72 32-93 (283)
138 cd05624 STKc_MRCK_beta Catalyt 99.4 5.1E-12 1.1E-16 75.0 7.3 66 2-72 22-87 (331)
139 cd05049 PTKc_Trk Catalytic dom 99.4 5.7E-12 1.2E-16 72.6 7.3 62 4-72 33-94 (280)
140 cd06652 STKc_MEKK2 Catalytic d 99.4 1.2E-11 2.6E-16 70.9 8.5 69 2-72 23-92 (265)
141 cd05115 PTKc_Zap-70 Catalytic 99.3 1E-11 2.2E-16 71.2 7.9 61 4-72 20-80 (257)
142 cd08229 STKc_Nek7 Catalytic do 99.3 6.3E-12 1.4E-16 72.0 7.1 65 3-72 24-88 (267)
143 cd06655 STKc_PAK2 Catalytic do 99.3 8.7E-12 1.9E-16 72.9 7.7 63 2-72 40-102 (296)
144 KOG0587|consensus 99.3 3.6E-12 7.9E-17 82.9 6.6 66 2-72 40-107 (953)
145 cd07836 STKc_Pho85 Catalytic d 99.3 5.4E-12 1.2E-16 72.8 6.8 62 2-70 21-82 (284)
146 cd07847 STKc_CDKL1_4 Catalytic 99.3 6.7E-12 1.4E-16 72.4 7.1 65 2-72 22-86 (286)
147 cd06656 STKc_PAK3 Catalytic do 99.3 9.6E-12 2.1E-16 72.7 7.8 63 2-72 40-102 (297)
148 cd05079 PTKc_Jak1_rpt2 Catalyt 99.3 1E-11 2.2E-16 71.9 7.8 65 3-72 30-94 (284)
149 cd06613 STKc_MAP4K3_like Catal 99.3 1.1E-11 2.5E-16 70.6 7.9 62 3-72 25-86 (262)
150 cd07859 STKc_TDY_MAPK_plant Ca 99.3 7.3E-12 1.6E-16 73.9 7.3 67 2-70 21-88 (338)
151 cd05050 PTKc_Musk Catalytic do 99.3 7.5E-12 1.6E-16 72.6 7.2 62 4-72 33-94 (288)
152 cd05066 PTKc_EphR_A Catalytic 99.3 1E-11 2.3E-16 71.3 7.6 60 6-72 32-91 (267)
153 cd05614 STKc_MSK2_N N-terminal 99.3 7.7E-12 1.7E-16 74.0 7.3 66 3-72 25-91 (332)
154 KOG0694|consensus 99.3 4.2E-12 9.2E-17 80.8 6.3 65 3-72 390-455 (694)
155 cd05632 STKc_GRK5 Catalytic do 99.3 1.1E-11 2.5E-16 72.0 7.7 65 3-72 22-86 (285)
156 KOG4257|consensus 99.3 2.4E-12 5.2E-17 82.2 5.1 57 7-71 419-475 (974)
157 cd06644 STKc_STK10_LOK Catalyt 99.3 1.6E-11 3.4E-16 71.4 8.3 62 3-72 34-95 (292)
158 cd05617 STKc_aPKC_zeta Catalyt 99.3 9.6E-12 2.1E-16 73.7 7.4 66 2-72 16-82 (327)
159 KOG4278|consensus 99.3 5.9E-13 1.3E-17 85.2 2.4 56 8-72 294-349 (1157)
160 cd05602 STKc_SGK1 Catalytic do 99.3 6.9E-12 1.5E-16 74.1 6.8 66 2-72 16-82 (325)
161 cd08220 STKc_Nek8 Catalytic do 99.3 1.1E-11 2.5E-16 70.4 7.4 65 2-72 21-85 (256)
162 cd06654 STKc_PAK1 Catalytic do 99.3 1.5E-11 3.1E-16 71.9 8.0 63 2-72 41-103 (296)
163 cd07861 STKc_CDK1_euk Catalyti 99.3 9.1E-12 2E-16 71.9 6.9 63 2-70 21-83 (285)
164 cd05095 PTKc_DDR2 Catalytic do 99.3 1.7E-11 3.7E-16 71.5 8.1 61 5-72 45-105 (296)
165 cd05062 PTKc_IGF-1R Catalytic 99.3 1.8E-11 3.8E-16 70.7 8.1 61 5-72 35-95 (277)
166 cd05619 STKc_nPKC_theta Cataly 99.3 7.9E-12 1.7E-16 73.8 6.7 66 2-72 16-82 (316)
167 cd05055 PTKc_PDGFR Catalytic d 99.3 1.4E-11 3E-16 72.2 7.7 62 4-72 63-125 (302)
168 cd07873 STKc_PCTAIRE1 Catalyti 99.3 8.7E-12 1.9E-16 72.8 6.8 62 2-70 27-88 (301)
169 cd05097 PTKc_DDR_like Catalyti 99.3 1.2E-11 2.7E-16 72.0 7.4 59 7-72 45-103 (295)
170 cd06607 STKc_TAO Catalytic dom 99.3 1.3E-11 2.8E-16 72.3 7.5 64 3-71 37-100 (307)
171 cd08225 STKc_Nek5 Catalytic do 99.3 4.8E-12 1E-16 72.0 5.5 65 2-72 21-85 (257)
172 cd05085 PTKc_Fer Catalytic dom 99.3 1.4E-11 3.1E-16 70.0 7.2 61 5-72 18-78 (250)
173 cd06605 PKc_MAPKK Catalytic do 99.3 1.2E-11 2.6E-16 70.7 6.9 64 2-72 22-85 (265)
174 cd08223 STKc_Nek4 Catalytic do 99.3 1.8E-11 3.9E-16 69.7 7.6 66 2-72 21-86 (257)
175 cd05065 PTKc_EphR_B Catalytic 99.3 1.8E-11 3.9E-16 70.3 7.6 59 7-72 33-91 (269)
176 cd05042 PTKc_Aatyk Catalytic d 99.3 2E-11 4.3E-16 70.1 7.7 60 6-72 22-81 (269)
177 cd06623 PKc_MAPKK_plant_like C 99.3 2.7E-11 5.9E-16 69.0 8.2 63 3-72 23-85 (264)
178 cd06643 STKc_SLK Catalytic dom 99.3 3.1E-11 6.7E-16 69.8 8.5 62 3-72 27-88 (282)
179 cd06653 STKc_MEKK3_like_1 Cata 99.3 3.4E-11 7.4E-16 69.1 8.6 69 2-72 23-92 (264)
180 cd07872 STKc_PCTAIRE2 Catalyti 99.3 1.3E-11 2.8E-16 72.3 6.7 62 2-70 27-88 (309)
181 cd05592 STKc_nPKC_theta_delta 99.3 1.3E-11 2.8E-16 72.9 6.6 66 2-72 16-82 (316)
182 cd07844 STKc_PCTAIRE_like Cata 99.3 1.3E-11 2.7E-16 71.6 6.4 62 2-70 26-87 (291)
183 cd05116 PTKc_Syk Catalytic dom 99.3 2.4E-11 5.2E-16 69.5 7.5 63 3-72 19-81 (257)
184 cd05610 STKc_MASTL Catalytic d 99.3 2.5E-11 5.4E-16 78.0 8.3 66 2-72 25-90 (669)
185 cd06917 STKc_NAK1_like Catalyt 99.3 2.4E-11 5.1E-16 70.0 7.5 64 2-72 22-88 (277)
186 PLN00009 cyclin-dependent kina 99.3 1.5E-11 3.2E-16 71.5 6.5 63 2-70 23-85 (294)
187 cd06659 STKc_PAK6 Catalytic do 99.3 1E-11 2.2E-16 72.6 5.9 63 2-72 42-104 (297)
188 cd06628 STKc_MAPKKK_Byr2_like 99.3 3.9E-11 8.5E-16 68.7 8.1 67 2-72 21-92 (267)
189 cd06631 STKc_YSK4 Catalytic do 99.3 3.3E-11 7.1E-16 69.0 7.8 65 4-72 22-88 (265)
190 cd06629 STKc_MAPKKK_Bck1_like 99.3 2E-11 4.3E-16 70.2 6.9 67 2-72 22-94 (272)
191 cd05623 STKc_MRCK_alpha Cataly 99.3 2.1E-11 4.6E-16 72.3 7.2 65 3-72 23-87 (332)
192 cd05574 STKc_phototropin_like 99.3 2.7E-11 5.8E-16 71.1 7.6 65 3-72 23-87 (316)
193 cd05620 STKc_nPKC_delta Cataly 99.3 1.3E-11 2.9E-16 72.8 6.3 66 2-72 16-82 (316)
194 cd05114 PTKc_Tec_Rlk Catalytic 99.3 1.7E-11 3.7E-16 70.0 6.6 59 5-72 27-85 (256)
195 cd05061 PTKc_InsR Catalytic do 99.3 3.2E-11 6.9E-16 70.1 7.7 61 5-72 35-95 (288)
196 cd07832 STKc_CCRK Catalytic do 99.3 2.6E-11 5.6E-16 69.9 7.2 63 3-72 22-84 (286)
197 cd07846 STKc_CDKL2_3 Catalytic 99.3 4.1E-12 8.9E-17 73.4 3.9 64 3-72 23-86 (286)
198 cd06657 STKc_PAK4 Catalytic do 99.3 2.5E-11 5.5E-16 70.9 7.2 62 3-72 42-103 (292)
199 cd07860 STKc_CDK2_3 Catalytic 99.3 6.1E-12 1.3E-16 72.7 4.5 63 2-70 21-83 (284)
200 cd05048 PTKc_Ror Catalytic Dom 99.3 3.5E-11 7.6E-16 69.5 7.7 61 5-72 34-94 (283)
201 KOG0660|consensus 99.3 3.6E-12 7.8E-17 76.3 3.6 66 2-69 43-109 (359)
202 cd06632 STKc_MEKK1_plant Catal 99.3 5.1E-11 1.1E-15 67.7 8.1 66 3-72 22-88 (258)
203 cd05579 STKc_MAST_like Catalyt 99.3 9.1E-12 2E-16 70.9 5.1 65 3-72 15-79 (265)
204 cd05054 PTKc_VEGFR Catalytic d 99.3 2.1E-11 4.5E-16 72.7 6.8 64 3-72 34-98 (337)
205 cd05038 PTKc_Jak_rpt2 Catalyti 99.3 4.6E-11 1E-15 68.8 8.0 64 4-72 31-94 (284)
206 cd05051 PTKc_DDR Catalytic dom 99.3 4.6E-11 1E-15 69.4 8.0 61 5-72 45-105 (296)
207 cd05033 PTKc_EphR Catalytic do 99.3 3.7E-11 7.9E-16 68.9 7.4 60 6-72 32-91 (266)
208 cd07833 STKc_CDKL Catalytic do 99.3 1E-11 2.2E-16 71.7 5.1 64 2-71 22-85 (288)
209 cd07876 STKc_JNK2 Catalytic do 99.3 3.4E-11 7.4E-16 72.0 7.5 68 2-71 42-111 (359)
210 cd06610 STKc_OSR1_SPAK Catalyt 99.3 5.8E-11 1.3E-15 67.8 8.2 63 3-72 23-85 (267)
211 KOG0592|consensus 99.3 3E-12 6.5E-17 80.0 3.0 66 2-72 94-160 (604)
212 cd05032 PTKc_InsR_like Catalyt 99.3 3.7E-11 7.9E-16 69.1 7.3 61 5-72 35-95 (277)
213 cd06658 STKc_PAK5 Catalytic do 99.3 1.2E-11 2.6E-16 72.3 5.3 62 3-72 44-105 (292)
214 cd06647 STKc_PAK_I Catalytic d 99.3 2.8E-11 6.1E-16 70.6 6.7 62 3-72 41-102 (293)
215 cd05052 PTKc_Abl Catalytic dom 99.3 2E-11 4.3E-16 70.0 5.9 61 3-72 28-88 (263)
216 KOG4721|consensus 99.3 4.1E-12 8.9E-17 80.6 3.2 51 6-71 147-197 (904)
217 cd06651 STKc_MEKK3 Catalytic d 99.3 8.9E-11 1.9E-15 67.4 8.5 69 2-72 23-92 (266)
218 cd07839 STKc_CDK5 Catalytic do 99.3 5.8E-12 1.3E-16 72.8 3.7 64 2-71 21-84 (284)
219 cd06635 STKc_TAO1 Catalytic do 99.3 8.2E-11 1.8E-15 69.3 8.6 63 3-70 47-109 (317)
220 cd05613 STKc_MSK1_N N-terminal 99.3 3.3E-11 7.1E-16 69.9 6.8 65 4-72 26-91 (290)
221 cd05093 PTKc_TrkB Catalytic do 99.3 5.1E-11 1.1E-15 69.2 7.5 61 4-72 33-93 (288)
222 cd05587 STKc_cPKC Catalytic do 99.3 4.1E-11 9E-16 70.8 7.2 66 2-72 21-87 (324)
223 cd05045 PTKc_RET Catalytic dom 99.3 6.8E-11 1.5E-15 68.7 7.9 60 6-72 30-89 (290)
224 cd06626 STKc_MEKK4 Catalytic d 99.2 6.8E-11 1.5E-15 67.5 7.7 64 3-72 22-85 (264)
225 KOG0594|consensus 99.2 2E-11 4.4E-16 72.6 5.5 66 2-69 32-100 (323)
226 cd05615 STKc_cPKC_alpha Cataly 99.2 3E-11 6.4E-16 71.5 6.2 66 2-72 21-87 (323)
227 cd06633 STKc_TAO3 Catalytic do 99.2 9.6E-11 2.1E-15 69.0 8.4 63 3-70 43-105 (313)
228 cd05035 PTKc_Axl_like Catalyti 99.2 7.9E-11 1.7E-15 67.5 7.8 66 5-72 26-93 (273)
229 cd05092 PTKc_TrkA Catalytic do 99.2 9.2E-11 2E-15 67.9 8.0 61 4-72 33-93 (280)
230 cd05044 PTKc_c-ros Catalytic d 99.2 2E-11 4.4E-16 69.9 5.2 60 6-72 26-85 (269)
231 cd07841 STKc_CDK7 Catalytic do 99.2 3.8E-11 8.3E-16 69.8 6.3 66 2-72 21-87 (298)
232 PLN00113 leucine-rich repeat r 99.2 1.8E-11 3.9E-16 80.6 5.5 58 3-72 712-769 (968)
233 cd05063 PTKc_EphR_A2 Catalytic 99.2 1E-10 2.2E-15 67.1 8.0 59 7-72 34-92 (268)
234 cd05036 PTKc_ALK_LTK Catalytic 99.2 8.3E-11 1.8E-15 68.0 7.6 61 5-72 35-95 (277)
235 cd08215 STKc_Nek Catalytic dom 99.2 1.1E-10 2.3E-15 66.2 7.9 64 3-72 22-85 (258)
236 cd05046 PTK_CCK4 Pseudokinase 99.2 6.4E-11 1.4E-15 68.1 7.1 61 5-72 34-94 (275)
237 cd05086 PTKc_Aatyk2 Catalytic 99.2 7.1E-11 1.5E-15 68.0 7.2 58 8-72 24-81 (268)
238 cd06638 STKc_myosinIIIA Cataly 99.2 6.4E-11 1.4E-15 68.5 7.1 66 2-72 39-106 (286)
239 KOG0576|consensus 99.2 7.9E-13 1.7E-17 84.3 -1.0 64 1-72 35-98 (829)
240 cd05041 PTKc_Fes_like Catalyti 99.2 8.9E-11 1.9E-15 66.7 7.5 60 6-72 19-78 (251)
241 cd05094 PTKc_TrkC Catalytic do 99.2 9.2E-11 2E-15 68.2 7.7 61 4-72 33-93 (291)
242 cd05068 PTKc_Frk_like Catalyti 99.2 4.5E-11 9.8E-16 68.4 6.3 59 5-72 29-87 (261)
243 cd05148 PTKc_Srm_Brk Catalytic 99.2 4.9E-11 1.1E-15 68.1 6.4 59 6-72 30-88 (261)
244 cd07870 STKc_PFTAIRE2 Catalyti 99.2 5.9E-11 1.3E-15 68.9 6.8 62 2-70 26-87 (291)
245 cd06648 STKc_PAK_II Catalytic 99.2 1.2E-10 2.5E-15 67.8 8.0 62 3-72 41-102 (285)
246 cd05053 PTKc_FGFR Catalytic do 99.2 1.1E-10 2.5E-15 67.7 7.9 61 5-72 41-102 (293)
247 cd07853 STKc_NLK Catalytic dom 99.2 3.4E-11 7.3E-16 72.4 5.9 67 2-70 21-88 (372)
248 cd06606 STKc_MAPKKK Catalytic 99.2 1.7E-10 3.6E-15 65.2 8.5 66 3-72 22-87 (260)
249 cd06614 STKc_PAK Catalytic dom 99.2 1.1E-10 2.5E-15 67.6 7.9 61 3-72 41-101 (286)
250 cd05040 PTKc_Ack_like Catalyti 99.2 9.6E-11 2.1E-15 66.8 7.5 58 7-72 24-81 (257)
251 cd06608 STKc_myosinIII_like Ca 99.2 1.2E-10 2.5E-15 66.7 7.8 65 3-72 28-95 (275)
252 cd05101 PTKc_FGFR2 Catalytic d 99.2 7.1E-11 1.5E-15 69.1 7.0 61 5-72 46-107 (304)
253 cd06612 STKc_MST1_2 Catalytic 99.2 9.3E-11 2E-15 66.7 7.2 59 4-72 26-84 (256)
254 cd05077 PTK_Jak1_rpt1 Pseudoki 99.2 7.4E-11 1.6E-15 67.9 6.7 59 6-72 32-90 (262)
255 cd05039 PTKc_Csk_like Catalyti 99.2 1.2E-10 2.7E-15 66.4 7.6 59 5-72 28-86 (256)
256 cd05113 PTKc_Btk_Bmx Catalytic 99.2 6.3E-11 1.4E-15 67.9 6.3 58 6-72 28-85 (256)
257 cd05072 PTKc_Lyn Catalytic dom 99.2 9.1E-11 2E-15 67.1 7.0 59 5-72 29-87 (261)
258 cd05098 PTKc_FGFR1 Catalytic d 99.2 1.3E-10 2.8E-15 68.1 7.7 61 5-72 49-110 (307)
259 cd07845 STKc_CDK10 Catalytic d 99.2 6.9E-11 1.5E-15 69.2 6.5 65 2-70 28-92 (309)
260 cd05099 PTKc_FGFR4 Catalytic d 99.2 1.3E-10 2.9E-15 68.3 7.7 61 5-72 43-104 (314)
261 cd05060 PTKc_Syk_like Catalyti 99.2 1.3E-10 2.9E-15 66.3 7.5 59 6-72 23-81 (257)
262 cd05091 PTKc_Ror2 Catalytic do 99.2 1.5E-10 3.3E-15 66.9 7.7 61 5-72 34-94 (283)
263 cd08530 STKc_CNK2-like Catalyt 99.2 4.3E-11 9.3E-16 68.0 5.3 65 2-72 21-85 (256)
264 smart00219 TyrKc Tyrosine kina 99.2 1.2E-10 2.7E-15 66.1 7.2 60 6-72 28-87 (258)
265 cd05088 PTKc_Tie2 Catalytic do 99.2 1.1E-10 2.3E-15 68.5 7.0 62 4-72 30-94 (303)
266 PF00069 Pkinase: Protein kina 99.2 6.9E-11 1.5E-15 67.2 6.1 65 2-72 20-84 (260)
267 cd05058 PTKc_Met_Ron Catalytic 99.2 1.7E-10 3.6E-15 66.0 7.6 62 5-72 22-83 (262)
268 KOG4236|consensus 99.2 6.6E-11 1.4E-15 74.8 6.3 64 1-70 584-647 (888)
269 cd07843 STKc_CDC2L1 Catalytic 99.2 1.1E-10 2.4E-15 67.8 6.9 64 3-70 27-90 (293)
270 cd05586 STKc_Sck1_like Catalyt 99.2 7.8E-11 1.7E-15 69.7 6.4 66 2-72 14-82 (330)
271 cd05056 PTKc_FAK Catalytic dom 99.2 8.2E-11 1.8E-15 67.6 6.3 58 7-72 35-92 (270)
272 cd06627 STKc_Cdc7_like Catalyt 99.2 2.2E-10 4.9E-15 64.9 7.9 64 3-72 22-85 (254)
273 cd00192 PTKc Catalytic domain 99.2 1.4E-10 3E-15 65.8 7.0 61 5-72 22-82 (262)
274 cd05611 STKc_Rim15_like Cataly 99.2 1.6E-10 3.5E-15 66.0 7.3 66 2-72 17-83 (260)
275 cd05616 STKc_cPKC_beta Catalyt 99.2 1.5E-10 3.2E-15 68.5 7.3 66 2-72 21-87 (323)
276 cd05047 PTKc_Tie Catalytic dom 99.2 1.6E-10 3.5E-15 66.6 7.2 58 8-72 24-82 (270)
277 cd07864 STKc_CDK12 Catalytic d 99.2 9.1E-11 2E-15 68.3 6.2 67 3-71 29-101 (302)
278 cd06637 STKc_TNIK Catalytic do 99.2 2.1E-10 4.6E-15 65.8 7.6 65 3-72 28-95 (272)
279 cd05123 STKc_AGC Catalytic dom 99.2 5.7E-11 1.2E-15 67.3 5.1 65 3-72 15-79 (250)
280 cd06634 STKc_TAO2 Catalytic do 99.2 2.4E-10 5.1E-15 67.2 7.8 64 2-70 36-99 (308)
281 cd07874 STKc_JNK3 Catalytic do 99.2 9.1E-11 2E-15 70.0 6.1 68 2-71 38-107 (355)
282 cd07855 STKc_ERK5 Catalytic do 99.2 4E-11 8.6E-16 71.1 4.6 67 2-70 26-92 (334)
283 cd07875 STKc_JNK1 Catalytic do 99.2 1.1E-10 2.4E-15 69.9 6.5 68 2-71 45-114 (364)
284 cd05108 PTKc_EGFR Catalytic do 99.2 1.6E-10 3.5E-15 68.0 7.0 58 7-72 37-94 (316)
285 cd05583 STKc_MSK_N N-terminal 99.2 8.7E-11 1.9E-15 68.1 5.8 65 4-72 26-91 (288)
286 KOG0599|consensus 99.2 4.4E-11 9.5E-16 70.7 4.3 67 2-72 38-109 (411)
287 cd07856 STKc_Sty1_Hog1 Catalyt 99.2 1.7E-10 3.7E-15 68.5 6.9 63 2-69 31-93 (328)
288 cd06617 PKc_MKK3_6 Catalytic d 99.2 1.7E-10 3.8E-15 66.5 6.8 62 2-70 22-84 (283)
289 cd07842 STKc_CDK8_like Catalyt 99.2 1.2E-10 2.6E-15 68.1 6.1 64 5-71 26-89 (316)
290 cd05067 PTKc_Lck_Blk Catalytic 99.2 1.6E-10 3.4E-15 66.1 6.4 58 5-72 29-86 (260)
291 cd06639 STKc_myosinIIIB Cataly 99.2 3.7E-10 8.1E-15 65.6 8.0 65 3-72 44-110 (291)
292 cd07835 STKc_CDK1_like Catalyt 99.2 8.8E-11 1.9E-15 67.8 5.3 63 2-70 20-82 (283)
293 cd05059 PTKc_Tec_like Catalyti 99.2 1.9E-10 4.1E-15 65.8 6.6 59 5-72 27-85 (256)
294 cd05034 PTKc_Src_like Catalyti 99.2 2.1E-10 4.5E-15 65.5 6.8 59 5-72 29-87 (261)
295 cd05581 STKc_PDK1 Catalytic do 99.2 5.2E-11 1.1E-15 68.4 4.2 65 3-72 23-88 (280)
296 cd05057 PTKc_EGFR_like Catalyt 99.2 4E-10 8.6E-15 65.1 7.9 58 7-72 37-94 (279)
297 cd07868 STKc_CDK8 Catalytic do 99.2 1.7E-10 3.8E-15 67.7 6.4 59 4-70 26-84 (317)
298 cd05100 PTKc_FGFR3 Catalytic d 99.2 2.9E-10 6.4E-15 67.4 7.4 60 6-72 44-104 (334)
299 cd07867 STKc_CDC2L6 Catalytic 99.1 3.2E-10 6.9E-15 66.5 7.4 60 4-71 26-85 (317)
300 KOG0199|consensus 99.1 3.4E-11 7.4E-16 77.7 3.5 58 7-72 139-196 (1039)
301 cd05083 PTKc_Chk Catalytic dom 99.1 2.1E-10 4.6E-15 65.4 6.4 58 4-72 27-84 (254)
302 PTZ00024 cyclin-dependent prot 99.1 2.5E-10 5.5E-15 67.6 6.9 65 2-70 30-104 (335)
303 cd06636 STKc_MAP4K4_6 Catalyti 99.1 5.1E-10 1.1E-14 64.7 8.0 65 3-72 38-105 (282)
304 cd05082 PTKc_Csk Catalytic dom 99.1 3.7E-10 7.9E-15 64.5 7.0 59 5-72 28-86 (256)
305 cd05122 PKc_STE Catalytic doma 99.1 7.1E-10 1.5E-14 62.5 8.0 62 3-72 22-83 (253)
306 cd05078 PTK_Jak2_Jak3_rpt1 Pse 99.1 6.2E-11 1.4E-15 67.9 3.7 58 7-72 28-85 (258)
307 PHA03212 serine/threonine kina 99.1 1.5E-10 3.3E-15 70.4 5.5 55 2-70 113-167 (391)
308 PTZ00283 serine/threonine prot 99.1 5.4E-10 1.2E-14 69.9 7.8 69 2-72 53-125 (496)
309 KOG0579|consensus 99.1 1.2E-11 2.6E-16 79.5 0.4 63 2-72 53-115 (1187)
310 cd05112 PTKc_Itk Catalytic dom 99.1 3.7E-10 8E-15 64.4 6.4 58 6-72 28-85 (256)
311 cd05071 PTKc_Src Catalytic dom 99.1 2.9E-10 6.2E-15 65.3 5.9 56 7-72 31-86 (262)
312 cd05070 PTKc_Fyn_Yrk Catalytic 99.1 3.6E-10 7.9E-15 64.7 6.3 58 5-72 29-86 (260)
313 cd05074 PTKc_Tyro3 Catalytic d 99.1 1.2E-09 2.7E-14 62.7 8.5 67 4-72 25-93 (273)
314 cd07865 STKc_CDK9 Catalytic do 99.1 3.7E-10 8E-15 65.8 6.4 67 2-70 33-103 (310)
315 cd05043 PTK_Ryk Pseudokinase d 99.1 7.6E-10 1.7E-14 63.9 7.6 62 5-72 34-95 (280)
316 cd07850 STKc_JNK Catalytic dom 99.1 5.6E-10 1.2E-14 66.7 7.2 67 2-70 37-105 (353)
317 cd07837 STKc_CdkB_plant Cataly 99.1 2.8E-10 6E-15 66.1 5.6 67 2-70 22-90 (295)
318 cd07852 STKc_MAPK15 Catalytic 99.1 3.7E-10 8.1E-15 67.0 6.2 65 2-70 28-93 (337)
319 KOG0658|consensus 99.1 4.9E-11 1.1E-15 71.6 2.4 59 3-69 46-105 (364)
320 cd05576 STKc_RPK118_like Catal 99.1 2.7E-10 5.9E-15 64.7 5.3 58 2-72 14-71 (237)
321 cd06616 PKc_MKK4 Catalytic dom 99.1 8.5E-10 1.8E-14 63.9 7.1 62 2-70 25-87 (288)
322 cd07840 STKc_CDK9_like Catalyt 99.1 7.6E-10 1.7E-14 63.7 6.8 64 3-70 21-84 (287)
323 cd05073 PTKc_Hck Catalytic dom 99.1 7.3E-10 1.6E-14 63.5 6.7 58 5-72 29-86 (260)
324 KOG4645|consensus 99.1 3.4E-12 7.4E-17 85.6 -3.3 65 2-72 1256-1320(1509)
325 PRK10345 hypothetical protein; 99.1 8.6E-10 1.9E-14 62.7 6.6 64 3-72 22-93 (210)
326 cd07880 STKc_p38gamma_MAPK12 C 99.1 7.6E-10 1.6E-14 66.0 6.6 65 2-68 36-102 (343)
327 cd05633 STKc_GRK3 Catalytic do 99.1 1.7E-09 3.6E-14 62.8 7.8 66 2-72 15-83 (279)
328 cd08528 STKc_Nek10 Catalytic d 99.1 2.2E-09 4.8E-14 61.6 8.3 64 5-72 25-95 (269)
329 KOG0604|consensus 99.1 1.9E-11 4.1E-16 72.7 -0.4 62 2-72 83-145 (400)
330 cd07831 STKc_MOK Catalytic dom 99.1 9.1E-10 2E-14 63.4 6.4 63 3-70 21-84 (282)
331 cd05069 PTKc_Yes Catalytic dom 99.1 8.7E-10 1.9E-14 63.1 6.3 56 7-72 31-86 (260)
332 cd05606 STKc_beta_ARK Catalyti 99.1 2.1E-09 4.5E-14 62.3 7.9 66 2-72 15-83 (278)
333 cd05075 PTKc_Axl Catalytic dom 99.1 2.3E-09 5E-14 61.5 8.0 63 8-72 28-92 (272)
334 PTZ00036 glycogen synthase kin 99.0 9.7E-10 2.1E-14 67.8 6.6 62 2-71 87-152 (440)
335 cd05118 STKc_CMGC Catalytic do 99.0 5.1E-10 1.1E-14 64.4 4.9 63 2-70 20-82 (283)
336 cd05089 PTKc_Tie1 Catalytic do 99.0 1.6E-09 3.4E-14 63.3 6.8 58 8-72 31-89 (297)
337 cd07878 STKc_p38beta_MAPK11 Ca 99.0 6.6E-10 1.4E-14 66.1 5.0 66 2-69 36-103 (343)
338 cd05111 PTK_HER3 Pseudokinase 99.0 2.6E-09 5.6E-14 61.9 7.3 57 8-72 38-94 (279)
339 cd05037 PTK_Jak_rpt1 Pseudokin 99.0 1.1E-09 2.4E-14 62.3 5.6 56 7-72 31-86 (259)
340 cd07863 STKc_CDK4 Catalytic do 99.0 1.5E-09 3.1E-14 62.9 6.1 67 2-70 21-91 (288)
341 cd05109 PTKc_HER2 Catalytic do 99.0 3.5E-09 7.6E-14 61.2 7.7 57 8-72 38-94 (279)
342 cd07849 STKc_ERK1_2_like Catal 99.0 1.4E-09 3E-14 64.6 5.9 66 2-70 26-92 (336)
343 cd07830 STKc_MAK_like Catalyti 99.0 5.5E-10 1.2E-14 64.4 3.8 62 3-72 21-83 (283)
344 cd07854 STKc_MAPK4_6 Catalytic 99.0 1E-09 2.3E-14 65.4 5.0 65 2-70 26-100 (342)
345 cd07866 STKc_BUR1 Catalytic do 99.0 1.5E-09 3.2E-14 63.3 5.4 67 2-70 29-99 (311)
346 KOG0690|consensus 99.0 2.2E-10 4.7E-15 69.1 1.9 66 2-72 189-254 (516)
347 cd07858 STKc_TEY_MAPK_plant Ca 99.0 1.3E-09 2.8E-14 64.8 5.1 67 2-70 26-93 (337)
348 cd05110 PTKc_HER4 Catalytic do 99.0 2.7E-09 5.9E-14 62.5 6.2 57 8-72 38-94 (303)
349 cd07862 STKc_CDK6 Catalytic do 98.9 6.4E-09 1.4E-13 60.3 7.1 64 5-70 26-93 (290)
350 PHA03207 serine/threonine kina 98.9 3.1E-09 6.7E-14 64.5 6.0 54 4-70 117-170 (392)
351 cd07877 STKc_p38alpha_MAPK14 C 98.9 5E-09 1.1E-13 62.6 6.5 65 2-68 38-104 (345)
352 smart00220 S_TKc Serine/Threon 98.9 2.8E-09 6.1E-14 59.6 5.2 63 3-72 11-73 (244)
353 cd06618 PKc_MKK7 Catalytic dom 98.9 5.6E-09 1.2E-13 60.9 6.3 61 3-70 37-98 (296)
354 KOG0200|consensus 98.9 3.9E-09 8.5E-14 67.6 6.0 60 6-72 328-388 (609)
355 cd07829 STKc_CDK_like Catalyti 98.9 1.4E-09 3E-14 62.6 3.6 62 3-70 21-82 (282)
356 KOG1035|consensus 98.9 6.5E-10 1.4E-14 74.7 2.3 50 2-54 500-549 (1351)
357 cd07834 STKc_MAPK Catalytic do 98.9 1.9E-09 4.1E-14 63.6 3.8 66 3-70 22-88 (330)
358 PRK09188 serine/threonine prot 98.9 1.2E-08 2.7E-13 62.1 7.2 60 5-72 43-104 (365)
359 smart00221 STYKc Protein kinas 98.9 1.1E-08 2.3E-13 56.9 6.4 62 4-72 22-83 (225)
360 PHA03211 serine/threonine kina 98.9 9E-09 2E-13 64.1 6.4 55 2-70 190-244 (461)
361 cd07838 STKc_CDK4_6_like Catal 98.9 9.9E-09 2.1E-13 59.2 6.2 66 3-70 21-90 (287)
362 cd07879 STKc_p38delta_MAPK13 C 98.9 8.2E-09 1.8E-13 61.5 5.8 67 2-70 36-104 (342)
363 KOG4279|consensus 98.9 1.7E-09 3.8E-14 70.4 2.6 64 1-72 595-658 (1226)
364 KOG0608|consensus 98.8 1.2E-09 2.7E-14 70.4 1.9 63 5-72 653-715 (1034)
365 cd08222 STKc_Nek11 Catalytic d 98.8 3.7E-09 8.1E-14 60.4 3.7 44 25-72 45-88 (260)
366 KOG0612|consensus 98.8 2E-10 4.4E-15 76.7 -1.7 66 2-72 96-161 (1317)
367 cd00180 PKc Catalytic domain o 98.8 4.9E-08 1.1E-12 53.2 7.8 62 4-72 16-77 (215)
368 cd07851 STKc_p38 Catalytic dom 98.8 3.6E-09 7.9E-14 63.1 3.4 65 3-69 37-103 (343)
369 PHA03209 serine/threonine kina 98.8 8.7E-09 1.9E-13 61.9 4.9 54 3-70 88-141 (357)
370 KOG0667|consensus 98.8 1.2E-08 2.5E-13 64.9 5.4 59 2-69 207-271 (586)
371 KOG1006|consensus 98.8 3.5E-09 7.6E-14 62.4 2.6 61 2-69 85-146 (361)
372 PHA03390 pk1 serine/threonine- 98.8 4.4E-08 9.6E-13 56.6 7.1 58 2-72 37-95 (267)
373 KOG1151|consensus 98.8 2.4E-08 5.3E-13 62.6 6.0 67 1-72 483-554 (775)
374 KOG2345|consensus 98.8 4.1E-09 8.8E-14 61.4 1.9 66 3-72 43-109 (302)
375 KOG1152|consensus 98.7 4.1E-09 8.8E-14 67.2 1.8 62 2-67 582-650 (772)
376 KOG0193|consensus 98.7 3.2E-08 7E-13 63.1 5.2 58 8-72 416-473 (678)
377 KOG0668|consensus 98.7 1.1E-08 2.5E-13 59.4 2.9 59 3-70 60-119 (338)
378 cd07857 STKc_MPK1 Catalytic do 98.7 1.2E-07 2.5E-12 56.3 7.0 63 6-70 27-90 (332)
379 KOG1025|consensus 98.7 3E-09 6.6E-14 69.9 0.1 59 6-72 725-783 (1177)
380 KOG0665|consensus 98.7 1.1E-09 2.4E-14 65.4 -1.8 68 1-70 36-105 (369)
381 KOG0666|consensus 98.7 1.1E-09 2.4E-14 65.7 -1.8 59 7-70 54-112 (438)
382 PRK10359 lipopolysaccharide co 98.7 7.1E-08 1.5E-12 55.7 5.5 67 5-72 53-129 (232)
383 KOG1027|consensus 98.5 4.8E-08 1E-12 64.1 2.1 55 5-70 532-587 (903)
384 KOG0695|consensus 98.5 6.9E-08 1.5E-12 58.9 2.5 65 3-72 272-337 (593)
385 cd05147 RIO1_euk RIO kinase fa 98.5 1.6E-07 3.4E-12 52.6 3.8 61 5-72 20-103 (190)
386 PHA03210 serine/threonine kina 98.5 3.8E-07 8.3E-12 57.3 5.7 42 25-70 206-247 (501)
387 cd05145 RIO1_like RIO kinase f 98.5 5.2E-07 1.1E-11 50.3 5.5 61 5-71 20-102 (190)
388 KOG0986|consensus 98.5 3.3E-08 7.1E-13 61.7 0.6 65 3-72 207-271 (591)
389 PTZ00284 protein kinase; Provi 98.5 1.1E-06 2.4E-11 54.6 7.2 60 2-69 150-215 (467)
390 KOG2052|consensus 98.5 1.7E-07 3.6E-12 58.3 3.4 61 5-72 233-295 (513)
391 KOG0696|consensus 98.5 1E-08 2.2E-13 63.7 -2.1 64 4-72 372-436 (683)
392 KOG0669|consensus 98.5 2.4E-09 5.3E-14 62.8 -4.6 66 3-70 39-108 (376)
393 KOG0984|consensus 98.5 3.9E-07 8.4E-12 52.4 4.3 61 2-69 67-128 (282)
394 KOG3653|consensus 98.4 3E-07 6.6E-12 57.5 4.1 61 5-72 232-294 (534)
395 PRK14879 serine/threonine prot 98.4 1.2E-06 2.6E-11 49.0 5.4 64 5-72 18-85 (211)
396 TIGR03724 arch_bud32 Kae1-asso 98.4 1.5E-06 3.1E-11 48.3 5.5 64 5-72 16-83 (199)
397 KOG0596|consensus 98.4 4.6E-07 1E-11 57.8 3.5 57 7-69 386-443 (677)
398 KOG0983|consensus 98.2 5.1E-07 1.1E-11 53.8 1.7 60 3-69 114-174 (391)
399 KOG1243|consensus 98.2 2.5E-06 5.5E-11 55.2 4.5 58 3-68 34-91 (690)
400 smart00090 RIO RIO-like kinase 98.2 7E-06 1.5E-10 47.4 5.4 65 2-72 50-134 (237)
401 PRK09605 bifunctional UGMP fam 98.1 2.3E-05 4.9E-10 49.8 6.6 43 26-72 380-422 (535)
402 KOG1290|consensus 98.1 1.8E-05 3.9E-10 50.2 5.9 63 1-68 98-168 (590)
403 PLN03224 probable serine/threo 98.0 1.4E-05 3.1E-10 50.7 5.3 65 4-72 184-271 (507)
404 KOG0603|consensus 98.0 1.7E-06 3.6E-11 55.5 1.1 58 2-71 343-401 (612)
405 cd05120 APH_ChoK_like Aminogly 98.0 2.1E-05 4.5E-10 41.1 4.3 55 7-71 22-78 (155)
406 PRK12274 serine/threonine prot 98.0 4.4E-05 9.6E-10 43.9 5.8 37 28-72 47-84 (218)
407 KOG0614|consensus 97.9 1.2E-07 2.5E-12 60.2 -5.3 60 8-72 447-506 (732)
408 KOG0195|consensus 97.9 8.1E-07 1.8E-11 53.1 -1.7 61 6-72 213-273 (448)
409 COG0515 SPS1 Serine/threonine 97.9 0.00016 3.5E-09 41.2 7.4 61 7-72 23-84 (384)
410 KOG1266|consensus 97.7 7.5E-07 1.6E-11 54.2 -4.1 71 2-72 87-158 (458)
411 cd05144 RIO2_C RIO kinase fami 97.7 0.00012 2.5E-09 40.9 4.8 61 4-72 37-117 (198)
412 KOG1345|consensus 97.6 3.8E-05 8.2E-10 46.0 1.8 62 2-72 45-108 (378)
413 KOG0670|consensus 97.5 6.5E-05 1.4E-09 48.3 2.1 58 2-68 453-516 (752)
414 KOG1167|consensus 97.5 0.00013 2.8E-09 45.3 3.2 56 5-70 63-119 (418)
415 PRK01723 3-deoxy-D-manno-octul 97.5 0.00071 1.5E-08 39.2 6.0 66 6-71 55-131 (239)
416 KOG0664|consensus 97.4 1.9E-06 4.1E-11 51.6 -5.2 66 2-69 74-140 (449)
417 PRK04750 ubiB putative ubiquin 97.3 0.00034 7.4E-09 45.0 3.6 29 41-72 219-247 (537)
418 cd05154 ACAD10_11_like Acyl-Co 97.2 0.00045 9.8E-09 38.6 3.1 63 6-72 22-86 (223)
419 KOG3741|consensus 97.2 0.00044 9.5E-09 44.6 3.2 64 3-70 298-361 (655)
420 TIGR01982 UbiB 2-polyprenylphe 97.2 0.0019 4.2E-08 40.5 5.6 41 29-72 200-244 (437)
421 cd05119 RIO RIO kinase family, 97.0 0.0022 4.7E-08 35.2 4.5 34 30-71 65-100 (187)
422 cd05151 ChoK Choline Kinase (C 97.0 0.00086 1.9E-08 36.1 2.8 57 5-72 20-77 (170)
423 KOG0671|consensus 96.8 0.00073 1.6E-08 41.9 1.3 59 2-69 110-174 (415)
424 PLN02876 acyl-CoA dehydrogenas 96.3 0.013 2.7E-07 39.5 4.9 45 26-71 82-129 (822)
425 KOG1023|consensus 96.1 0.0054 1.2E-07 39.2 2.4 33 36-72 1-33 (484)
426 KOG0603|consensus 95.6 0.0023 4.9E-08 41.7 -0.6 63 4-72 20-83 (612)
427 PF01163 RIO1: RIO1 family; I 95.5 0.14 3E-06 29.0 6.4 36 26-69 52-89 (188)
428 PHA02882 putative serine/threo 95.1 0.24 5.1E-06 29.1 6.7 39 31-69 72-110 (294)
429 PLN03225 Serine/threonine-prot 95.0 0.038 8.2E-07 35.9 3.4 14 59-72 208-221 (566)
430 cd05146 RIO3_euk RIO kinase fa 94.9 0.26 5.6E-06 28.1 6.3 34 30-71 74-109 (197)
431 KOG1024|consensus 94.2 0.24 5.3E-06 31.7 5.4 46 24-72 329-374 (563)
432 KOG0576|consensus 94.0 0.023 4.9E-07 38.0 0.8 39 29-71 280-319 (829)
433 KOG1033|consensus 93.2 0.014 3.1E-07 37.5 -1.0 47 6-55 74-120 (516)
434 COG3642 Mn2+-dependent serine/ 92.8 0.58 1.3E-05 27.0 5.0 40 26-71 43-84 (204)
435 cd05150 APH Aminoglycoside 3'- 91.6 0.4 8.7E-06 27.5 3.6 41 27-71 36-77 (244)
436 KOG0590|consensus 91.6 0.041 9E-07 36.1 -0.5 60 7-72 47-107 (601)
437 TIGR02172 Fb_sc_TIGR02172 Fibr 91.6 0.39 8.4E-06 27.7 3.6 41 27-71 37-79 (226)
438 PRK10593 hypothetical protein; 91.6 0.45 9.7E-06 28.6 3.9 45 27-72 52-99 (297)
439 KOG0601|consensus 91.6 0.066 1.4E-06 34.8 0.4 63 4-72 289-352 (524)
440 KOG1164|consensus 91.1 0.68 1.5E-05 27.9 4.4 55 7-69 45-104 (322)
441 COG2112 Predicted Ser/Thr prot 90.2 0.53 1.2E-05 27.0 3.1 53 5-71 44-97 (201)
442 KOG3087|consensus 89.3 1.7 3.6E-05 25.4 4.7 61 5-70 29-94 (229)
443 PRK15123 lipopolysaccharide co 87.5 4.1 9E-05 24.3 5.8 43 28-70 74-119 (268)
444 PF03881 Fructosamin_kin: Fruc 87.4 2.1 4.6E-05 25.8 4.6 57 4-71 38-97 (288)
445 PF12260 PIP49_C: Protein-kina 87.2 1.2 2.6E-05 25.1 3.3 34 30-71 7-41 (188)
446 PRK09550 mtnK methylthioribose 86.5 3.9 8.4E-05 26.0 5.5 59 7-71 52-116 (401)
447 COG3001 Uncharacterized protei 85.0 5.4 0.00012 24.1 5.3 44 24-71 50-96 (286)
448 KOG4158|consensus 84.1 0.37 7.9E-06 31.1 0.3 15 40-54 274-288 (598)
449 KOG1163|consensus 83.1 1.4 3E-05 26.7 2.4 56 3-68 37-93 (341)
450 PF01636 APH: Phosphotransfera 83.0 6.1 0.00013 21.9 4.9 58 7-71 21-80 (239)
451 cd05157 ETNK_euk Ethanolamine 82.8 2.9 6.3E-05 23.8 3.6 53 6-71 24-77 (235)
452 KOG0590|consensus 81.9 0.11 2.3E-06 34.3 -2.7 38 29-70 368-405 (601)
453 KOG3021|consensus 81.6 4.2 9.1E-05 24.4 3.9 45 24-71 46-93 (313)
454 PLN02756 S-methyl-5-thioribose 80.3 5.4 0.00012 25.6 4.3 39 26-70 78-119 (418)
455 COG0478 RIO-like serine/threon 78.0 2.9 6.4E-05 25.6 2.6 37 26-70 153-191 (304)
456 TIGR02721 ycfN_thiK thiamine k 77.8 3.9 8.4E-05 23.7 3.0 35 29-71 38-73 (256)
457 cd05155 APH_ChoK_like_1 Unchar 77.4 8.6 0.00019 22.0 4.4 46 26-72 32-80 (235)
458 PF10707 YrbL-PhoP_reg: PhoP r 77.4 11 0.00024 21.6 5.4 41 26-70 55-101 (199)
459 KOG1093|consensus 75.9 5.7 0.00012 26.9 3.6 41 27-70 27-67 (725)
460 PF14531 Kinase-like: Kinase-l 75.5 9.3 0.0002 23.3 4.2 37 2-39 33-69 (288)
461 cd05156 ChoK_euk Choline Kinas 75.0 4.2 9E-05 24.1 2.7 54 5-71 28-82 (302)
462 PF03109 ABC1: ABC1 family; I 73.1 1.8 3.9E-05 22.6 0.8 13 4-16 33-45 (119)
463 KOG1235|consensus 71.7 3.6 7.8E-05 27.2 2.0 12 60-71 276-287 (538)
464 COG0661 AarF Predicted unusual 70.8 4.2 9.2E-05 26.7 2.2 13 4-16 147-159 (517)
465 PF07914 DUF1679: Protein of u 70.2 11 0.00024 24.0 3.9 41 31-71 115-160 (414)
466 PF11986 PB1-F2: Influenza A P 67.7 1.7 3.8E-05 21.4 0.0 19 35-53 26-44 (90)
467 KOG0601|consensus 66.9 2.4 5.1E-05 27.9 0.5 61 3-69 140-201 (524)
468 KOG1240|consensus 66.1 18 0.00039 26.8 4.4 47 5-53 46-92 (1431)
469 PF06293 Kdo: Lipopolysacchari 62.5 26 0.00057 19.8 4.7 46 25-70 54-101 (206)
470 cd05124 AFK Actin-Fragmin Kina 62.1 4.9 0.00011 23.9 1.1 12 61-72 92-103 (238)
471 KOG2270|consensus 60.8 45 0.00098 22.0 5.2 13 4-16 166-178 (520)
472 KOG1165|consensus 60.3 7.7 0.00017 24.7 1.8 55 4-68 51-106 (449)
473 TIGR02906 spore_CotS spore coa 56.6 30 0.00066 20.4 3.9 13 59-71 68-80 (313)
474 cd05153 HomoserineK_II Homoser 56.4 23 0.00049 20.9 3.3 54 8-71 39-99 (296)
475 TIGR00938 thrB_alt homoserine 55.8 43 0.00092 20.1 4.5 41 28-71 61-108 (307)
476 PF06176 WaaY: Lipopolysacchar 51.1 14 0.0003 21.9 1.8 12 60-71 117-128 (229)
477 PLN00181 protein SPA1-RELATED; 48.5 2 4.4E-05 29.1 -2.1 34 36-69 26-63 (793)
478 PF14978 MRP-63: Mitochondrial 47.5 24 0.00053 17.8 2.1 23 24-46 22-44 (91)
479 PF15632 ATPgrasp_Ter: ATP-gra 43.3 12 0.00026 23.3 0.8 12 60-71 198-209 (329)
480 smart00605 CW CW domain. 40.8 29 0.00064 17.1 1.9 13 3-15 64-76 (94)
481 KOG4105|consensus 39.8 35 0.00076 18.1 2.0 23 31-53 75-97 (141)
482 PTZ00384 choline kinase; Provi 38.2 47 0.001 21.1 2.8 34 30-71 100-134 (383)
483 cd01782 AF6_RA_repeat1 Ubiquit 38.1 64 0.0014 17.0 4.8 15 4-18 30-44 (112)
484 COG1718 RIO1 Serine/threonine 37.1 1E+02 0.0022 18.9 5.0 34 29-70 115-150 (268)
485 smart00330 PIPKc Phosphatidyli 32.8 1.3E+02 0.0028 19.0 4.8 30 40-69 112-144 (342)
486 TIGR01767 MTRK 5-methylthiorib 31.4 64 0.0014 20.6 2.6 58 7-70 21-84 (370)
487 PRK09902 hypothetical protein; 30.8 1.2E+02 0.0026 17.9 4.2 45 25-70 62-109 (216)
488 PF06955 XET_C: Xyloglucan end 30.8 24 0.00052 15.6 0.5 8 62-69 31-38 (51)
489 PF09192 Act-Frag_cataly: Acti 30.7 30 0.00064 21.1 1.0 11 60-70 122-132 (275)
490 PF10084 DUF2322: Uncharacteri 30.2 19 0.00042 18.5 0.2 15 40-54 78-92 (100)
491 PRK12396 5-methylribose kinase 29.8 25 0.00054 22.7 0.7 59 6-70 54-117 (409)
492 KOG4720|consensus 29.2 45 0.00098 21.2 1.6 35 30-72 126-161 (391)
493 cd02846 PAZ_argonaute_like PAZ 28.4 52 0.0011 16.6 1.6 27 38-69 86-112 (114)
494 PF04405 ScdA_N: Domain of Unk 28.0 25 0.00053 16.0 0.3 6 66-71 25-30 (56)
495 COG3173 Predicted aminoglycosi 27.9 1.6E+02 0.0034 18.5 3.8 46 24-71 63-110 (321)
496 KOG0777|consensus 27.8 27 0.0006 21.1 0.6 20 29-48 107-126 (322)
497 PF08265 YL1_C: YL1 nuclear pr 27.2 27 0.00058 13.8 0.3 9 2-10 14-22 (30)
498 PF06136 DUF966: Domain of unk 27.2 36 0.00079 21.3 1.0 13 37-49 11-23 (337)
499 KOG0424|consensus 27.0 1E+02 0.0022 17.2 2.6 36 9-46 92-127 (158)
500 PF01504 PIP5K: Phosphatidylin 26.4 1.5E+02 0.0032 17.6 5.3 56 8-70 29-90 (252)
No 1
>KOG0595|consensus
Probab=99.82 E-value=6e-20 Score=110.47 Aligned_cols=65 Identities=23% Similarity=0.249 Sum_probs=56.8
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
++++|..||||.|.+.. ..+...+.+..||.+|+.++|||||++++++.+.+ .+|||||||+||+
T Consensus 31 h~~~~~~VAIK~i~~~~--l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~----~i~lVMEyC~gGD 95 (429)
T KOG0595|consen 31 HKKSGTEVAIKCIAKKK--LNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDD----FIYLVMEYCNGGD 95 (429)
T ss_pred eccCCceEEeeeehhhc--cCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCC----eEEEEEEeCCCCC
Confidence 46788999999998753 24566778899999999999999999999998874 8999999999996
No 2
>KOG0615|consensus
Probab=99.80 E-value=1.8e-19 Score=108.87 Aligned_cols=68 Identities=22% Similarity=0.371 Sum_probs=54.6
Q ss_pred CCcccceEEEEEEEEeccccCch---HHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 1 MDTEEGVEVVWNEVQFSERKNFK---AQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 1 ~~~~~g~~vAiK~i~~~~~~~~~---~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+++.||+.||||.+.+......+ .....+++|+++|++|+|||||+++++|..++ ..||||||++||.
T Consensus 192 ~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~d----s~YmVlE~v~GGe 262 (475)
T KOG0615|consen 192 YEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPD----SSYMVLEYVEGGE 262 (475)
T ss_pred EEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCC----ceEEEEEEecCcc
Confidence 36789999999999875321111 12344689999999999999999999998874 7899999999995
No 3
>KOG0575|consensus
Probab=99.75 E-value=5.8e-18 Score=105.50 Aligned_cols=66 Identities=26% Similarity=0.309 Sum_probs=58.2
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
|..+|..||+|++.+... .....++++.+||+|.++|+|||||+++++|+|.+ .+|||.|+|..|+
T Consensus 39 ~~~tge~~A~KvVpk~~l-~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~----nVYivLELC~~~s 104 (592)
T KOG0575|consen 39 DLDTGEVVAVKVVPKKLL-KKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSN----NVYIVLELCHRGS 104 (592)
T ss_pred EcCCCcEEEEEEeehHHh-cCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCC----ceEEEEEecCCcc
Confidence 457999999999998643 34567889999999999999999999999999974 8999999999885
No 4
>KOG0581|consensus
Probab=99.74 E-value=9.2e-18 Score=99.99 Aligned_cols=66 Identities=17% Similarity=0.150 Sum_probs=58.0
Q ss_pred CCcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 1 MDTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 1 ~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+++.|++.+|+|.|... ..+...+++.||+++++..+||+||++|++|.++. ..++|+||||+|||
T Consensus 99 ~Hk~t~~i~AlK~I~~~---~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~---~~isI~mEYMDgGS 164 (364)
T KOG0581|consen 99 RHKPTGKIYALKVILLN---IDPALQKQILRELEILRSCQSPYIVGFYGAFYSNG---EEISICMEYMDGGS 164 (364)
T ss_pred EEcCCCeEEEEEeeccc---CCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCC---ceEEeehhhcCCCC
Confidence 36789999999999654 35678899999999999999999999999999873 25999999999997
No 5
>KOG0611|consensus
Probab=99.71 E-value=1.2e-17 Score=101.93 Aligned_cols=66 Identities=17% Similarity=0.312 Sum_probs=57.5
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..+|+.||||.|+++.. .+.+..-.+.|||+||+.|+|||||++|++|+..+ .+.|||||.++|.
T Consensus 74 e~~sgR~VAiKsIrKdkI-kdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkd----KIvivMEYaS~Ge 139 (668)
T KOG0611|consen 74 EHKSGREVAIKSIRKDKI-KDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKD----KIVIVMEYASGGE 139 (668)
T ss_pred hccCCcEeehhhhhhhhc-ccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCc----eEEEEEEecCCcc
Confidence 457899999999988643 45667778999999999999999999999998864 8999999999984
No 6
>KOG0600|consensus
Probab=99.65 E-value=5.6e-16 Score=95.65 Aligned_cols=66 Identities=24% Similarity=0.314 Sum_probs=55.2
Q ss_pred CCcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCC
Q psy8984 1 MDTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEET 70 (72)
Q Consensus 1 ~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~ 70 (72)
+|..||+.||+|+++.+. .......-+.|||.||++|+|||||+|.+...+.. +..+|||+|||+.
T Consensus 137 r~~~tgkivALKKvr~d~--~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~--~~siYlVFeYMdh 202 (560)
T KOG0600|consen 137 RDLETGKIVALKKVRFDN--EKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKL--SGSIYLVFEYMDH 202 (560)
T ss_pred eecccCcEEEEEEeeccc--CCCcchHHHHHHHHHHHhcCCCcccceeeEEEecC--CceEEEEEecccc
Confidence 367899999999999864 23455667889999999999999999999988762 2589999999974
No 7
>KOG0584|consensus
Probab=99.64 E-value=9.5e-17 Score=100.55 Aligned_cols=70 Identities=33% Similarity=0.606 Sum_probs=62.5
Q ss_pred CCcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 1 MDTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 1 ~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+|..+|..|||..++..+....+...+++..|+.+|+.|+|||||++|++|.+.. +.++.+|+|+|++||
T Consensus 60 ~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~--n~~in~iTEL~TSGt 129 (632)
T KOG0584|consen 60 FDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTD--NKTINFITELFTSGT 129 (632)
T ss_pred cccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCC--CceeeeeeecccCCc
Confidence 5889999999999998776566677899999999999999999999999999876 357899999999997
No 8
>KOG0586|consensus
Probab=99.63 E-value=1.3e-15 Score=95.33 Aligned_cols=65 Identities=20% Similarity=0.274 Sum_probs=55.7
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..||..||||.|.+.. .....++.+.||+++|+.|+|||||+++.+.+.+. .+|+||||+.+|.
T Consensus 77 ~~~t~~~VaiK~idkt~--ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~----~lylV~eya~~ge 141 (596)
T KOG0586|consen 77 HILTGTEVAIKIIDKTQ--LNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEA----TLYLVMEYASGGE 141 (596)
T ss_pred ecCCCceEEEEEehhcc--cChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecc----eeEEEEEeccCch
Confidence 45689999999998763 34456677999999999999999999999998874 8999999999884
No 9
>KOG0032|consensus
Probab=99.63 E-value=1.6e-15 Score=92.07 Aligned_cols=66 Identities=24% Similarity=0.316 Sum_probs=55.9
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCC-CcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLE-HPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~-HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
++.||..+|+|.+.+... ........+.+|+++|+++. |||||.++++|++.. .+|+|||+|.||.
T Consensus 56 ~~~tg~~~A~K~i~k~~~-~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~----~~~lvmEL~~GGe 122 (382)
T KOG0032|consen 56 EKSTGKEVACKVIPKRKL-RGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPD----SVYLVMELCEGGE 122 (382)
T ss_pred ecCCCceeEEEEeehhhc-cccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCC----eEEEEEEecCCch
Confidence 467899999999987633 22235678999999999998 999999999999974 8999999999984
No 10
>KOG0582|consensus
Probab=99.62 E-value=1.4e-15 Score=93.04 Aligned_cols=63 Identities=11% Similarity=0.252 Sum_probs=55.7
Q ss_pred cccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 3 ~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
..+++.||||+++++. .......+.+|+..|+.++||||++++.+|... ..+|+||.||.+||
T Consensus 48 ~p~~e~VAIK~inLEk---c~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~----~~LWvVmpfMa~GS 110 (516)
T KOG0582|consen 48 IPTNEVVAIKIINLEK---CNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVD----SELWVVMPFMAGGS 110 (516)
T ss_pred cccCCEEEEEEeehhh---hhhhHHHHHHHHHHhhhcCCCCcceEEEEEEec----ceeEEeehhhcCCc
Confidence 4678899999999873 334578899999999999999999999999987 49999999999997
No 11
>KOG0585|consensus
Probab=99.62 E-value=2e-15 Score=92.97 Aligned_cols=70 Identities=21% Similarity=0.245 Sum_probs=54.7
Q ss_pred CCcccceEEEEEEEEeccccCc----------hHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCC
Q psy8984 1 MDTEEGVEVVWNEVQFSERKNF----------KAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEET 70 (72)
Q Consensus 1 ~~~~~g~~vAiK~i~~~~~~~~----------~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~ 70 (72)
+|..+|+.||||.+.+...... ....+++.+||.+|++|+|||||+|+++..++. .+.+|||+|||+.
T Consensus 117 r~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~LiEvLDDP~--s~~~YlVley~s~ 194 (576)
T KOG0585|consen 117 RDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLIEVLDDPE--SDKLYLVLEYCSK 194 (576)
T ss_pred eecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEEEeecCcc--cCceEEEEEeccC
Confidence 3567899999999986432110 012468999999999999999999999986643 4689999999998
Q ss_pred CC
Q psy8984 71 PT 72 (72)
Q Consensus 71 Gs 72 (72)
|.
T Consensus 195 G~ 196 (576)
T KOG0585|consen 195 GE 196 (576)
T ss_pred Cc
Confidence 84
No 12
>KOG0192|consensus
Probab=99.61 E-value=3.9e-15 Score=89.85 Aligned_cols=63 Identities=21% Similarity=0.247 Sum_probs=51.8
Q ss_pred cceE-EEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 5 EGVE-VVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 5 ~g~~-vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
.|.. ||+|.+...+. .....+.|.+|+.+|++++|||||+++|++.+++ ..+.||||||++|+
T Consensus 63 ~g~~~vavK~~~~~~~--~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~---~~~~iVtEy~~~Gs 126 (362)
T KOG0192|consen 63 RGTDVVAVKIISDPDF--DDESRKAFRREASLLSRLRHPNIVQFYGACTSPP---GSLCIVTEYMPGGS 126 (362)
T ss_pred CCceeEEEEEecchhc--ChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC---CceEEEEEeCCCCc
Confidence 3556 99999986542 2233779999999999999999999999998863 25899999999996
No 13
>KOG0588|consensus
Probab=99.61 E-value=1.2e-15 Score=96.65 Aligned_cols=66 Identities=17% Similarity=0.268 Sum_probs=57.2
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+.+||+.+|||.|.+.. .........+.|||.||+.+.||||+++|++|++. ..+|+|.||++||.
T Consensus 33 h~~TGqlaaiKii~k~~-~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~----~~lylvlEyv~gGE 98 (786)
T KOG0588|consen 33 HAETGQLAAIKIIPKRS-ELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENK----QHLYLVLEYVPGGE 98 (786)
T ss_pred cccccceeEEEeecccc-ccccccccchhhhhHHHHHhcCCCeeeeeeeeccC----ceEEEEEEecCCch
Confidence 67899999999998752 13445677899999999999999999999999887 48999999999994
No 14
>KOG1026|consensus
Probab=99.61 E-value=1.2e-15 Score=97.89 Aligned_cols=61 Identities=18% Similarity=0.219 Sum_probs=53.2
Q ss_pred cceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 5 EGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 5 ~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
....||||.++.. ...+.++.|+||+++|..|+|||||+|+|+|...+ .++||+|||..|+
T Consensus 515 ~~~lVAVK~LKd~---a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~----P~~MvFEYm~~GD 575 (774)
T KOG1026|consen 515 DEQLVAVKALKDK---AENQARQDFRREAELLAELQHPNIVRLLGVCREGD----PLCMVFEYMDHGD 575 (774)
T ss_pred cceehhHhhhccc---ccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCC----eeEEEEEeccccc
Confidence 3467999999864 34558899999999999999999999999998874 7999999999985
No 15
>PHA02988 hypothetical protein; Provisional
Probab=99.59 E-value=1.8e-14 Score=83.90 Aligned_cols=68 Identities=21% Similarity=0.268 Sum_probs=52.4
Q ss_pred ccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 4 EEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 4 ~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
.+|..||+|.++.... ......+.+.+|+.+|++++||||+++++++.+...+...+++|||||+||+
T Consensus 41 ~~~~~vavK~~~~~~~-~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~~~g~ 108 (283)
T PHA02988 41 FNNKEVIIRTFKKFHK-GHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYCTRGY 108 (283)
T ss_pred ECCEEEEEEecccccc-ccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeCCCCc
Confidence 3678999999976422 2233356788999999999999999999998772111246899999999986
No 16
>KOG0589|consensus
Probab=99.59 E-value=6.9e-15 Score=89.89 Aligned_cols=66 Identities=18% Similarity=0.271 Sum_probs=55.6
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
++..+..|++|+|.... .....+....+|+.++++++|||||.+++.|...+ .-++|+|+||+||+
T Consensus 25 hk~~~~~~vlK~I~l~~--~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~---~~l~Ivm~Y~eGg~ 90 (426)
T KOG0589|consen 25 HKSDDKLYVLKKINLEK--LTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDG---QLLCIVMEYCEGGD 90 (426)
T ss_pred hccCCceEEEEEEeccc--cCchhhHHHHHHHHHHHhccCCCeeeeccchhcCC---ceEEEEEeecCCCC
Confidence 45567789999999874 34456668899999999999999999999998874 23999999999996
No 17
>KOG0194|consensus
Probab=99.58 E-value=1e-14 Score=90.25 Aligned_cols=59 Identities=20% Similarity=0.147 Sum_probs=50.5
Q ss_pred EEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 9 VVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 9 vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
||+|..+.+.. ........+.+|.++|++++|||||++||+..... .+|||||+|+||+
T Consensus 189 VAvK~~k~~~~-~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~----Pl~ivmEl~~gGs 247 (474)
T KOG0194|consen 189 VAVKTTKGSSE-LTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEE----PLMLVMELCNGGS 247 (474)
T ss_pred eEEEeeccccc-ccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCC----ccEEEEEecCCCc
Confidence 89999885321 34567788999999999999999999999988874 7999999999996
No 18
>KOG0591|consensus
Probab=99.58 E-value=6.2e-17 Score=94.83 Aligned_cols=66 Identities=20% Similarity=0.240 Sum_probs=54.8
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeee-eeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHR-YWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~-~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..+|..+|+|.|+... .+...++.+..|+.+|++|+|||||++++ .|..+. ..++||||||++|+
T Consensus 40 ~~~~g~l~a~K~i~f~~--md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~---evlnivmE~c~~GD 106 (375)
T KOG0591|consen 40 CLLDGKLVALKKIQFGM--MDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDN---EVLNIVMELCDAGD 106 (375)
T ss_pred eccCcchhhhhhcchhh--ccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccc---hhhHHHHHhhcccC
Confidence 45789999999999653 35677889999999999999999999999 554442 34899999999995
No 19
>KOG0593|consensus
Probab=99.57 E-value=1.9e-15 Score=89.36 Aligned_cols=64 Identities=19% Similarity=0.228 Sum_probs=54.7
Q ss_pred CCcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCC
Q psy8984 1 MDTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEET 70 (72)
Q Consensus 1 ~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~ 70 (72)
.+++||+.||||++.-+. .++...+-..|||.+|++|+|||+|.+.++|... ..+++|+|||+.
T Consensus 22 rnk~TgqIVAIKkF~Ese--dd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrk----rklhLVFE~~dh 85 (396)
T KOG0593|consen 22 RNKDTGQIVAIKKFVESE--DDPVVKKIALREIRMLKQLKHENLVNLIEVFRRK----RKLHLVFEYCDH 85 (396)
T ss_pred ccCCcccEEEEEeeccCC--ccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhc----ceeEEEeeecch
Confidence 478999999999986542 3456677789999999999999999999999875 589999999974
No 20
>KOG0580|consensus
Probab=99.56 E-value=6.6e-16 Score=88.56 Aligned_cols=66 Identities=21% Similarity=0.300 Sum_probs=56.4
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
.++++..||+|++-++.. .......++.||++|-++|+||||+++|++|.+.. .+|+++||.++|+
T Consensus 43 ekks~~IvalKVlfKsqi-~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~----riyLilEya~~ge 108 (281)
T KOG0580|consen 43 EKKSLFIVALKVLFKSQI-LKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSK----RIYLILEYAPRGE 108 (281)
T ss_pred eccCCcEEEEeeeeHHHH-HHhcchhhhhheeEeecccCCccHHhhhhheeccc----eeEEEEEecCCch
Confidence 357788999999987643 23346788999999999999999999999999984 8999999999985
No 21
>KOG0583|consensus
Probab=99.56 E-value=1.3e-14 Score=87.81 Aligned_cols=67 Identities=18% Similarity=0.261 Sum_probs=53.2
Q ss_pred CcccceEEEEEEEEeccccCch-HHHHHHHHHHHHHhcCC-CcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFK-AQEEKIQQVFENLTQLE-HPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~-~~~~~~~~Ei~~l~~l~-HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..+|..||+|.+......... ...+.+.||+.+++.++ ||||+++++++.... .+|+|||||.||+
T Consensus 38 ~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~----~~~ivmEy~~gGd 106 (370)
T KOG0583|consen 38 HRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT----KIYIVMEYCSGGD 106 (370)
T ss_pred eccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC----eEEEEEEecCCcc
Confidence 4568899999977654211111 34567789999999998 999999999998874 7999999999984
No 22
>KOG0574|consensus
Probab=99.56 E-value=2.1e-15 Score=89.62 Aligned_cols=62 Identities=15% Similarity=0.197 Sum_probs=54.4
Q ss_pred CCcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 1 MDTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 1 ~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+++++|..+|||++..+ ...+.+..||.+|++++.|+||++|+.|... ..+|||||||..||
T Consensus 53 IH~EsG~v~AIK~VPV~------sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~----sDLWIVMEYCGAGS 114 (502)
T KOG0574|consen 53 IHRESGHVLAIKKVPVD------TDLQEIIKEISIMQQCKSKYVVKYYGSYFKH----SDLWIVMEYCGAGS 114 (502)
T ss_pred HHhccCcEEEEEecCcc------chHHHHHHHHHHHHHcCCchhhhhhhhhccC----CceEeehhhcCCCc
Confidence 36899999999999864 3467788999999999999999999998776 37999999999886
No 23
>KOG0659|consensus
Probab=99.56 E-value=4.2e-15 Score=86.38 Aligned_cols=63 Identities=21% Similarity=0.350 Sum_probs=53.7
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEET 70 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~ 70 (72)
|.+||+.||||+|+.... .........|||..|+.++||||+.+.++|-..+ .+.||+|||+.
T Consensus 23 d~~t~~~VAIKKIkl~~~--kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~----~l~lVfEfm~t 85 (318)
T KOG0659|consen 23 DTETGKRVAIKKIKLGNA--KDGINRTALREIKLLQELKHPNIIELIDVFPHKS----NLSLVFEFMPT 85 (318)
T ss_pred ecCCCcEEEEEEeecccc--ccCccHHHHHHHHHHHHccCcchhhhhhhccCCC----ceEEEEEeccc
Confidence 788999999999998642 2344567899999999999999999999998763 79999999974
No 24
>KOG1187|consensus
Probab=99.55 E-value=2.2e-14 Score=86.60 Aligned_cols=61 Identities=23% Similarity=0.331 Sum_probs=49.4
Q ss_pred cceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 5 EGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 5 ~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
.|..||||++.... ... ...|.+|+.+|.+++|||+|+|+|||.+.. ...+||+|||++||
T Consensus 98 ~~~~vAVK~~~~~~---~~~-~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~---~~~~LVYEym~nGs 158 (361)
T KOG1187|consen 98 DGTVVAVKRLSSNS---GQG-EREFLNEVEILSRLRHPNLVKLLGYCLEGG---EHRLLVYEYMPNGS 158 (361)
T ss_pred CCCEEEEEEecCCC---Ccc-hhHHHHHHHHHhcCCCcCcccEEEEEecCC---ceEEEEEEccCCCC
Confidence 45789999876542 111 445999999999999999999999998863 14899999999996
No 25
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=99.55 E-value=4.4e-14 Score=83.40 Aligned_cols=65 Identities=12% Similarity=0.144 Sum_probs=54.0
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
++.+|..||+|.++... ........+.+|+.+++.++||||+++++++.++ +..|+|||||++|+
T Consensus 21 ~~~~~~~vaiK~~~~~~--~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~----~~~~lv~e~~~~~~ 85 (327)
T cd08227 21 YKPTGEYVTVRRINLEA--CTNEMVTFLQGELHVSKLFNHPNIVPYRATFIAD----NELWVVTSFMAYGS 85 (327)
T ss_pred ecccCcEEEEEEechhh--ccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEEC----CEEEEEEeccCCCc
Confidence 46789999999997642 1234456788899999999999999999999887 48999999999885
No 26
>KOG0578|consensus
Probab=99.54 E-value=3.7e-15 Score=92.58 Aligned_cols=62 Identities=21% Similarity=0.294 Sum_probs=53.5
Q ss_pred cccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 3 ~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
..++..||||++.+.. +...+-+..|+.+|+..+|||||.+++.|.-.+ .+|+|||||+||+
T Consensus 295 ~~~~~~VaiK~m~l~~----Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~d----eLWVVMEym~ggs 356 (550)
T KOG0578|consen 295 ISTKQEVAIKRMDLRK----QPKKELLLNEILVMRDLHHPNIVNFLDSYLVGD----ELWVVMEYMEGGS 356 (550)
T ss_pred ccCCceEEEEEEEecc----CCchhhhHHHHHHHHhccchHHHHHHHHhcccc----eeEEEEeecCCCc
Confidence 4678889999999852 345677899999999999999999999987763 8999999999996
No 27
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=99.54 E-value=3.6e-14 Score=85.26 Aligned_cols=66 Identities=15% Similarity=0.119 Sum_probs=53.7
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..+|+.||+|++..... ........+.+|+.+++.++||||+++++++.+. ..+|+|||||+||+
T Consensus 22 ~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~----~~~~lv~E~~~gg~ 87 (377)
T cd05629 22 KKDTGKIYAMKTLLKSEM-FKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDA----QYLYLIMEFLPGGD 87 (377)
T ss_pred ECCCCCEEEEEEEEHHHH-HHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcC----CeeEEEEeCCCCCc
Confidence 456889999999975421 1233456788999999999999999999999876 48999999999985
No 28
>KOG0605|consensus
Probab=99.53 E-value=2.5e-14 Score=88.73 Aligned_cols=65 Identities=20% Similarity=0.191 Sum_probs=57.3
Q ss_pred cccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 3 ~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+.||..+|+|+++++.. ........++.|-.+|....+|.||+||..|.+.+ .+||||||++||+
T Consensus 163 k~Tg~iyAmK~LkKS~M-~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~----~LYLiMEylPGGD 227 (550)
T KOG0605|consen 163 KDTGEIYAMKILKKSEM-LKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKE----YLYLIMEYLPGGD 227 (550)
T ss_pred ccCCcEEeeecccHHHH-HhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCC----eeEEEEEecCCcc
Confidence 57999999999998754 33456778899999999999999999999999985 8999999999996
No 29
>KOG0197|consensus
Probab=99.53 E-value=2.3e-14 Score=88.24 Aligned_cols=56 Identities=16% Similarity=0.202 Sum_probs=48.4
Q ss_pred EEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 8 EVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 8 ~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
.||+|.++... ...+.|.+|+++|++|+|+|||++++++..+. .+|||||||+.|+
T Consensus 232 ~vavk~ik~~~-----m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~----piyIVtE~m~~Gs 287 (468)
T KOG0197|consen 232 KVAVKTIKEGS-----MSPEAFLREAQIMKKLRHEKLVKLYGVCTKQE----PIYIVTEYMPKGS 287 (468)
T ss_pred cccceEEeccc-----cChhHHHHHHHHHHhCcccCeEEEEEEEecCC----ceEEEEEecccCc
Confidence 69999997632 34567889999999999999999999998863 6999999999996
No 30
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=99.52 E-value=7.1e-14 Score=84.19 Aligned_cols=66 Identities=11% Similarity=0.108 Sum_probs=54.3
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..+|..||+|++..... ........+.+|+.+|+.++||||+++++++.+. ..+|+|||||+||+
T Consensus 22 ~~~~~~~~aiK~i~~~~~-~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~----~~~~lv~E~~~gg~ 87 (381)
T cd05626 22 KVDTHALYAMKTLRKKDV-LNRNQVAHVKAERDILAEADNEWVVKLYYSFQDK----DNLYFVMDYIPGGD 87 (381)
T ss_pred ECCCCCEEEEEEEEHHHh-hhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecC----CEEEEEEecCCCCc
Confidence 456889999999976432 1234456789999999999999999999999886 48999999999985
No 31
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=99.52 E-value=4.8e-14 Score=83.52 Aligned_cols=66 Identities=23% Similarity=0.172 Sum_probs=53.5
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..+|..||+|.+..... ........+.+|+.+|+.++||||+++++++.+. ..+|+|||||.||+
T Consensus 39 ~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~----~~~~lv~e~~~~~~ 104 (329)
T PTZ00263 39 HKGTGEYYAIKCLKKREI-LKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDE----NRVYFLLEFVVGGE 104 (329)
T ss_pred ECCCCCEEEEEEEEHHHH-hhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcC----CEEEEEEcCCCCCh
Confidence 356788999999976421 1223456788999999999999999999999886 48999999999985
No 32
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=99.52 E-value=4.6e-14 Score=84.27 Aligned_cols=66 Identities=18% Similarity=0.174 Sum_probs=53.6
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..+|..||+|++..... ........+.+|+.+|+.++||||+++++++.+. ..+|+|||||.||+
T Consensus 22 ~~~~~~~vaiK~~~~~~~-~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~----~~~~lv~E~~~~g~ 87 (364)
T cd05599 22 KKDTGHIYAMKKLRKSEM-LEKEQVAHVRAERDILAEADNPWVVKLYYSFQDE----NYLYLIMEYLPGGD 87 (364)
T ss_pred ECCCCCEEEEEEEEHHHh-hhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcC----CeEEEEECCCCCcH
Confidence 456789999999986421 1223456678999999999999999999999886 48999999999985
No 33
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=99.52 E-value=1.1e-13 Score=82.61 Aligned_cols=64 Identities=19% Similarity=0.257 Sum_probs=53.3
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..+|..||+|.+... ........+.+|+++++.++||||+++++++.+. ..+|+|||||++|+
T Consensus 95 ~~~~~~~vaiK~~~~~---~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----~~~~lv~e~~~~~~ 158 (353)
T PLN00034 95 HRPTGRLYALKVIYGN---HEDTVRRQICREIEILRDVNHPNVVKCHDMFDHN----GEIQVLLEFMDGGS 158 (353)
T ss_pred ECCCCCEEEEEEEecC---CcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccC----CeEEEEEecCCCCc
Confidence 3467889999998653 2334567789999999999999999999999776 48999999999985
No 34
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=99.51 E-value=1.2e-13 Score=84.17 Aligned_cols=61 Identities=16% Similarity=0.147 Sum_probs=50.3
Q ss_pred cceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCC-CcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 5 EGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLE-HPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 5 ~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~-HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
++..||+|.+... ......+.+.+|+.+|+++. ||||+++++++.+. ..+|||||||++|+
T Consensus 66 ~~~~vavK~l~~~---~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~----~~~~lv~Ey~~~g~ 127 (400)
T cd05105 66 PVMKVAVKMLKPT---ARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKS----GPIYIITEYCFYGD 127 (400)
T ss_pred CceEEEEEecCCC---CChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccC----CceEEEEEecCCCc
Confidence 3457999998653 23345678999999999996 99999999999876 37999999999986
No 35
>KOG0663|consensus
Probab=99.51 E-value=2e-14 Score=85.86 Aligned_cols=66 Identities=17% Similarity=0.198 Sum_probs=52.9
Q ss_pred CCcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCC
Q psy8984 1 MDTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEET 70 (72)
Q Consensus 1 ~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~ 70 (72)
+|+.|++.||+|+++++. ......-.-+|||.+|.+++|||||.+.++..-.. .+.+|||||||+.
T Consensus 96 kdk~t~eIVALKr~kmek--ek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~--~d~iy~VMe~~Eh 161 (419)
T KOG0663|consen 96 KDKKTDEIVALKRLKMEK--EKEGFPITSLREINILLKARHPNIVEVKEVVVGSN--MDKIYIVMEYVEH 161 (419)
T ss_pred ccCCcceeEEeeeccccc--ccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccc--cceeeeeHHHHHh
Confidence 478999999999999863 22233445689999999999999999999987543 2579999999963
No 36
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=99.51 E-value=8.8e-14 Score=81.78 Aligned_cols=66 Identities=8% Similarity=0.036 Sum_probs=53.5
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..+|..||+|.++.... ........+.+|+.+|+.++||||+++++++.+. ..+|+|||||++|+
T Consensus 14 ~~~~~~~~aiK~i~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----~~~~lv~e~~~~g~ 79 (312)
T cd05585 14 KRDTQRIYALKTIRKAHI-VSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSP----EKLYLVLAFINGGE 79 (312)
T ss_pred ECCCCCEEEEEEEEHHHh-hhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecC----CeEEEEEcCCCCCc
Confidence 456788999999975421 1234456778999999999999999999999876 48999999999985
No 37
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=99.51 E-value=8.9e-14 Score=83.66 Aligned_cols=66 Identities=9% Similarity=0.133 Sum_probs=54.0
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..++..||+|.+..... ........+.+|+.+++.++||||+++++++.+. ..+|+|||||+||+
T Consensus 22 ~~~~~~~~aiK~i~~~~~-~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~----~~~~lv~E~~~gg~ 87 (382)
T cd05625 22 KVDTKALYAMKTLRKKDV-LLRNQVAHVKAERDILAEADNEWVVRLYYSFQDK----DNLYFVMDYIPGGD 87 (382)
T ss_pred ECCCCCEEEEEEEeHHHh-hhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeC----CEEEEEEeCCCCCc
Confidence 456788999999976421 1234456788999999999999999999999886 48999999999985
No 38
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=99.51 E-value=6.8e-14 Score=83.95 Aligned_cols=66 Identities=11% Similarity=0.156 Sum_probs=53.3
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..+|..||+|.+..... ........+.+|+.+|+.++||||+++++.|.+. ..+|+|||||+||+
T Consensus 22 ~~~~~~~~avK~~~~~~~-~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~----~~~~lv~E~~~~g~ 87 (376)
T cd05598 22 KVDTNALYAMKTLRKADV-LMRNQAAHVKAERDILAEADNEWVVKLYYSFQDK----DNLYFVMDYIPGGD 87 (376)
T ss_pred ECCCCCEEEEEEEcHHHH-HhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcC----CEEEEEEeCCCCCc
Confidence 456789999999975421 1123456688999999999999999999999876 48999999999985
No 39
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=99.51 E-value=9.1e-14 Score=82.16 Aligned_cols=66 Identities=14% Similarity=0.104 Sum_probs=53.5
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..+|..||+|.++.... ........+.+|+.+++.++||||++++++|.+. ..+|+|||||++|+
T Consensus 16 ~~~~~~~vaiK~~~~~~~-~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~----~~~~lv~E~~~~~~ 81 (323)
T cd05595 16 EKATGRYYAMKILRKEVI-IAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTH----DRLCFVMEYANGGE 81 (323)
T ss_pred ECCCCCEEEEEEEEHHHh-hhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecC----CEEEEEEeCCCCCc
Confidence 456789999999986421 1233456678899999999999999999999876 48999999999985
No 40
>KOG4250|consensus
Probab=99.51 E-value=6.5e-15 Score=93.54 Aligned_cols=68 Identities=22% Similarity=0.200 Sum_probs=53.8
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCC--CCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHND--KPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~--~~~~~lv~E~~~~Gs 72 (72)
+++||+.||||.++... .....+..-+|+++|++|+|||||+++++-++..++ ...-.++||||+|||
T Consensus 34 nketG~~vAvK~~~~~~---~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlvmEyC~gGs 103 (732)
T KOG4250|consen 34 NKETGRLVAVKTFNKES---SLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLVMEYCSGGS 103 (732)
T ss_pred ccccccchhHHhhhhhc---ccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEEEeecCCCc
Confidence 68999999999998642 334567778999999999999999999986543211 234579999999997
No 41
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=99.51 E-value=1.1e-13 Score=81.54 Aligned_cols=64 Identities=13% Similarity=0.162 Sum_probs=52.1
Q ss_pred cccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 3 ~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
..+|..||+|.+..... .......+.+|+++|++++||||+++++++.+. ..+|+||||+++|+
T Consensus 21 ~~~~~~~aiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~----~~~~lv~e~~~~~~ 84 (318)
T cd05582 21 PDAGQLYAMKVLKKATL--KVRDRVRTKMERDILAEVNHPFIVKLHYAFQTE----GKLYLILDFLRGGD 84 (318)
T ss_pred CCCCCEEEEEEEEHHHh--hhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcC----CEEEEEEcCCCCCc
Confidence 46789999999986421 123345678899999999999999999999876 48999999999885
No 42
>KOG0610|consensus
Probab=99.50 E-value=4.5e-14 Score=85.79 Aligned_cols=65 Identities=12% Similarity=0.086 Sum_probs=54.0
Q ss_pred cccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 3 ~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+.++..+|+|++.+... .......+++-|-+||+.++||.+++||..|+++ ...+++||||+||+
T Consensus 99 ~~t~~~fAmKVmdK~~l-~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~----~~~cl~meyCpGGd 163 (459)
T KOG0610|consen 99 RGTNCLFAMKVMDKESL-ASRKKLKRAQTEREILSLLDHPFLPTLYASFETD----KYSCLVMEYCPGGD 163 (459)
T ss_pred cCCCceEEEEEecHHHH-hhhhHHHHHHHHHHHHHhcCCCccchhhheeecc----ceeEEEEecCCCcc
Confidence 34568899999987643 2334566778899999999999999999999887 48899999999996
No 43
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.50 E-value=2e-13 Score=80.91 Aligned_cols=64 Identities=14% Similarity=0.137 Sum_probs=53.9
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..+|..||+|.+... ........+.+|+++|+.++||||+++++++.+. ..+++||||+++|+
T Consensus 26 ~~~~~~~~a~k~~~~~---~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----~~~~lv~e~~~~~~ 89 (331)
T cd06649 26 HKPSGLIMARKLIHLE---IKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD----GEISICMEHMDGGS 89 (331)
T ss_pred ECCCCcEEEEEEeecc---cCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEEC----CEEEEEeecCCCCc
Confidence 3567889999999764 2334567899999999999999999999999876 48999999999985
No 44
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=99.50 E-value=3.7e-14 Score=82.65 Aligned_cols=66 Identities=18% Similarity=0.123 Sum_probs=53.3
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..+|..||+|.+..... ........+.+|+.+++.++||||+++++++.+. ..+|+||||+++|+
T Consensus 22 ~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~----~~~~lv~e~~~~~~ 87 (291)
T cd05612 22 DRISEHYYALKVMAIPEV-IRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQ----RFLYMLMEYVPGGE 87 (291)
T ss_pred EcCCCCEEEEEEEEHHHH-hhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccC----CeEEEEEeCCCCCC
Confidence 456789999999976421 1223456788999999999999999999998876 48999999999985
No 45
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=99.50 E-value=2.8e-13 Score=79.14 Aligned_cols=61 Identities=18% Similarity=0.232 Sum_probs=50.8
Q ss_pred cceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 5 EGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 5 ~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
++..||+|.+... ........+.+|+.+|+.++||||+++++++.+.. .+++||||+.+|+
T Consensus 45 ~~~~vaiK~~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~----~~~lv~e~~~~~~ 105 (304)
T cd05096 45 RPLLVAVKILRPD---ANKNARNDFLKEVKILSRLKDPNIIRLLGVCVDED----PLCMITEYMENGD 105 (304)
T ss_pred cceEEEEEEecCC---CCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEecCC----ceEEEEecCCCCc
Confidence 4558999998753 23445677899999999999999999999998763 7899999999885
No 46
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=99.50 E-value=1.1e-13 Score=81.82 Aligned_cols=66 Identities=12% Similarity=0.112 Sum_probs=52.3
Q ss_pred cccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 3 ~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
..+|..||+|.++.............+.+|+.+|+.++||||+++++++.+. ..+|+||||++||+
T Consensus 21 ~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~----~~~~lv~e~~~~~~ 86 (323)
T cd05584 21 ADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTG----GKLYLILEYLSGGE 86 (323)
T ss_pred CCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecC----CeEEEEEeCCCCch
Confidence 3578899999997642211223345678899999999999999999999876 48999999999885
No 47
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=99.49 E-value=1.3e-13 Score=81.56 Aligned_cols=66 Identities=15% Similarity=0.046 Sum_probs=53.6
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..+|..||+|++..... ........+.+|+.+++.++||||+++++++.+. ..+|+|||||+||+
T Consensus 22 ~~~~~~~vaiK~~~~~~~-~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~----~~~~lv~e~~~g~~ 87 (333)
T cd05600 22 KKDTGEIVALKRMKKSLL-FKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDD----EYLYLAMEYVPGGD 87 (333)
T ss_pred ECCCCCEEEEEEEEHHHH-hhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcC----CEEEEEEeCCCCCC
Confidence 346788999999986421 1223456788999999999999999999999876 48999999999985
No 48
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=99.49 E-value=1.4e-13 Score=81.36 Aligned_cols=66 Identities=14% Similarity=0.107 Sum_probs=53.5
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..+|..||+|.++.... ........+.+|+.+|+.++||||+++++++.+. ..+|+||||++||+
T Consensus 16 ~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~----~~~~lv~e~~~~~~ 81 (323)
T cd05571 16 EKATGKYYAMKILKKEVI-IAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTH----DRLCFVMEYANGGE 81 (323)
T ss_pred ECCCCCEEEEEEEEHHHh-hhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcC----CEEEEEEeCCCCCc
Confidence 456889999999986421 1233456678999999999999999999999876 48999999999985
No 49
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=99.49 E-value=8.6e-14 Score=83.84 Aligned_cols=63 Identities=19% Similarity=0.164 Sum_probs=51.7
Q ss_pred cccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcC-CCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 3 ~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
..++..||+|.++... .....+.+.+|+.+|+.+ +||||+++++++.+.. ..|+|||||+||+
T Consensus 62 ~~~~~~vavK~l~~~~---~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~----~~~lv~E~~~~g~ 125 (375)
T cd05104 62 SDAAMTVAVKMLKPSA---HLTEREALMSELKVLSYLGNHINIVNLLGACTVGG----PTLVITEYCCYGD 125 (375)
T ss_pred CccceeEEEEeccCCc---CcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCC----cceeeehhccCCc
Confidence 3467789999986432 234556788999999999 8999999999998763 7899999999986
No 50
>KOG0598|consensus
Probab=99.49 E-value=3.6e-14 Score=84.75 Aligned_cols=65 Identities=14% Similarity=0.150 Sum_probs=56.1
Q ss_pred cccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 3 ~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+.||+.||+|.+++... ........+..|..||.+++||+||+++..|++.. .+|||+||+.||.
T Consensus 47 ~dt~kiYAmKvl~K~~i-v~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~----kLylVld~~~GGe 111 (357)
T KOG0598|consen 47 KDTGKIYAMKVLKKKKI-VEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEE----KLYLVLDYLNGGE 111 (357)
T ss_pred cccCceeehhhhhhhHh-hhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCC----eEEEEEeccCCcc
Confidence 57899999999987642 23346778899999999999999999999999974 8999999999994
No 51
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.49 E-value=2.9e-13 Score=80.38 Aligned_cols=64 Identities=14% Similarity=0.137 Sum_probs=53.6
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..+|..+|+|.+... ........+.+|+++++.++||||+++++++.+. ..+|+||||+.+|+
T Consensus 26 ~~~~~~~~a~k~~~~~---~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----~~~~lv~e~~~~~~ 89 (333)
T cd06650 26 HKPSGLIMARKLIHLE---IKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD----GEISICMEHMDGGS 89 (333)
T ss_pred ECCCCcEEEEEEeecc---cCHHHHHHHHHHHHHHHHCCCCcccceeEEEEEC----CEEEEEEecCCCCc
Confidence 3457889999988764 2334567789999999999999999999999886 48999999999985
No 52
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=99.49 E-value=1.9e-13 Score=80.98 Aligned_cols=66 Identities=14% Similarity=0.104 Sum_probs=53.7
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..+|..||+|.+..... ........+.+|+.+|+.++||||+++++++.+. ..+|+||||+++|+
T Consensus 16 ~~~~~~~~avK~~~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~----~~~~lv~Ey~~~g~ 81 (328)
T cd05593 16 EKASGKYYAMKILKKEVI-IAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTK----DRLCFVMEYVNGGE 81 (328)
T ss_pred ECCCCCEEEEEEEEHHHh-hhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcC----CEEEEEEeCCCCCC
Confidence 456789999999976421 1234456788999999999999999999999876 48999999999985
No 53
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=99.49 E-value=1.5e-13 Score=82.26 Aligned_cols=66 Identities=14% Similarity=0.089 Sum_probs=53.6
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..+|..||+|.++.... ........+.+|+.+++.++||||+++++.+.+. ..+|+|||||+||+
T Consensus 22 ~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~----~~~~lv~E~~~gg~ 87 (363)
T cd05628 22 KKDTGHVYAMKILRKADM-LEKEQVGHIRAERDILVEADSLWVVKMFYSFQDK----LNLYLIMEFLPGGD 87 (363)
T ss_pred ECCCCCEEEEEEEEHHHH-HHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecC----CeEEEEEcCCCCCc
Confidence 456789999999976421 1223456788999999999999999999999886 48999999999985
No 54
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=99.48 E-value=2.2e-13 Score=78.96 Aligned_cols=66 Identities=8% Similarity=-0.055 Sum_probs=52.6
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..+|..||+|.+..... ........+.+|+.+++.++||||+++++++.+. ..+|+|||||+||+
T Consensus 14 ~~~~~~~~avK~~~~~~~-~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~----~~~~lv~e~~~~g~ 79 (280)
T cd05608 14 MRATGKLYACKKLNKKRL-KKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTK----TDLCLVMTIMNGGD 79 (280)
T ss_pred EccCCcEEEEEeeeHHHH-hhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCC----CeEEEEEeCCCCCC
Confidence 456789999999975421 1222345678899999999999999999998876 47999999999985
No 55
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=99.48 E-value=1.1e-13 Score=81.83 Aligned_cols=63 Identities=11% Similarity=0.101 Sum_probs=50.7
Q ss_pred ccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcC-CCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 4 EEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 4 ~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
.++..||+|.++.. ........+.+|+.+|+.+ +||||+++++++.... ..+|++||||++|+
T Consensus 35 ~~~~~vavK~~~~~---~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~---~~~~lv~ey~~~g~ 98 (338)
T cd05102 35 SSCNTVAVKMLKEG---ATASEHKALMSELKILIHIGNHLNVVNLLGACTKPN---GPLMVIVEFCKYGN 98 (338)
T ss_pred ccchhhheeccccc---cchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCC---CceEEEEecCCCCc
Confidence 45678999998743 2234556789999999999 8999999999887653 46899999999986
No 56
>KOG1094|consensus
Probab=99.47 E-value=3.7e-14 Score=89.48 Aligned_cols=60 Identities=20% Similarity=0.271 Sum_probs=52.0
Q ss_pred ceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 6 GVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 6 g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..||+|.++..+ ....+..|.+||.+|.+|+|||||+++++|..++ .+++|||||++|+
T Consensus 562 ~lkVAVK~Lr~~a---~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~De----PicmI~EYmEnGD 621 (807)
T KOG1094|consen 562 PLKVAVKILRPDA---TKNARNDFLKEIKILSRLKHPNIVELLGVCVQDD----PLCMITEYMENGD 621 (807)
T ss_pred ceEEEEeecCccc---chhHHHHHHHHHHHHhccCCCCeeEEEeeeecCC----chHHHHHHHhcCc
Confidence 5789999998652 3456789999999999999999999999998764 7999999999985
No 57
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=99.47 E-value=7.2e-13 Score=75.49 Aligned_cols=65 Identities=26% Similarity=0.379 Sum_probs=53.9
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..+|..+|+|.+.... ........+.+|++++++++||||+++++++.+. ..++++||||++|+
T Consensus 21 ~~~~~~~~~~k~~~~~~--~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~----~~~~~~~e~~~~~~ 85 (256)
T cd08221 21 RTEDDSLVVWKEVNLTR--LSEKERRDALNEIVILSLLQHPNIIAYYNHFMDD----NTLLIEMEYANGGT 85 (256)
T ss_pred EcCCCcEEEEEEEeecc--cchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecC----CeEEEEEEecCCCc
Confidence 34678899999987653 2334556788999999999999999999999886 48999999999885
No 58
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=99.47 E-value=3.1e-13 Score=78.53 Aligned_cols=65 Identities=6% Similarity=-0.015 Sum_probs=51.9
Q ss_pred cccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 3 ~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
..+|..||+|.+..... ........+.+|+.+++.++||||+++++.+.+. ..+++|||||.+|+
T Consensus 22 ~~~~~~vavK~~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----~~~~lv~e~~~~~~ 86 (285)
T cd05605 22 RATGKMYACKKLEKKRI-KKRKGEAMALNEKQILEKVNSRFVVSLAYAYETK----DALCLVLTLMNGGD 86 (285)
T ss_pred cCCCceEEEEEEehhhh-hhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCC----CeEEEEEeccCCCc
Confidence 45788999999975422 1222345678899999999999999999999876 37999999999985
No 59
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=99.46 E-value=3.1e-13 Score=81.36 Aligned_cols=66 Identities=11% Similarity=0.015 Sum_probs=52.8
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..+|..||+|.+..... ........+.+|+.+++.++||||+++++++.+. ..+|+|||||+||+
T Consensus 64 ~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~----~~~~lv~Ey~~gg~ 129 (370)
T cd05596 64 HKSSKQVYAMKLLSKFEM-IKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDD----KYLYMVMEYMPGGD 129 (370)
T ss_pred ECCCCCEEEEEEEEHHHh-hhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecC----CEEEEEEcCCCCCc
Confidence 356788999999975421 1223445578899999999999999999999876 48999999999985
No 60
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=99.46 E-value=4.6e-13 Score=77.54 Aligned_cols=66 Identities=12% Similarity=0.054 Sum_probs=51.7
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
++.+|..||+|.+..... ........+.+|+++++.++||||+++++++.+. ..+|+||||++||+
T Consensus 14 ~~~~~~~~a~K~~~~~~~-~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~----~~~~lv~e~~~g~~ 79 (277)
T cd05607 14 VKNTGKMYACKKLDKKRL-KKKSGEKMALLEKEILEKVNSPFIVNLAYAFESK----THLCLVMSLMNGGD 79 (277)
T ss_pred EccCCcEEEEEEEcHHHh-hcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecC----CeEEEEEecCCCCC
Confidence 346789999999975422 1122344566799999999999999999999876 48999999999985
No 61
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=99.46 E-value=6.9e-13 Score=77.82 Aligned_cols=64 Identities=14% Similarity=0.133 Sum_probs=53.0
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..+|..+|+|.+... ........+.+|++++++++||||+++++++.+. ..+|++|||++||+
T Consensus 22 ~~~~~~~~a~k~~~~~---~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----~~~~lv~ey~~~~~ 85 (308)
T cd06615 22 HRPSGLIMARKLIHLE---IKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSD----GEISICMEHMDGGS 85 (308)
T ss_pred EcCCCeEEEEEEeccc---cCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeC----CEEEEEeeccCCCc
Confidence 3457888999988753 1234556788999999999999999999999886 48999999999885
No 62
>KOG0597|consensus
Probab=99.46 E-value=7.5e-14 Score=87.97 Aligned_cols=62 Identities=19% Similarity=0.204 Sum_probs=54.3
Q ss_pred cccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCC
Q psy8984 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEET 70 (72)
Q Consensus 3 ~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~ 70 (72)
+.|++.||+|.+.+.. ........+.+|++|++.|+|||||.+++.|++. ..+|+|+|||.|
T Consensus 24 K~t~~~vAik~i~K~g--r~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~----~~~~vVte~a~g 85 (808)
T KOG0597|consen 24 KYTIQVVAIKFIDKSG--RNEKELKNLRQEVRILRSLKHPNIVEMLESFETS----AHLWVVTEYAVG 85 (808)
T ss_pred ccceeEEEEEEehhcC--CchHHHHHHHHHHHHHHhcCCcchhhHHHhhccc----ceEEEEehhhhh
Confidence 5678899999998864 3455778899999999999999999999999887 489999999986
No 63
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=99.45 E-value=1.2e-12 Score=75.80 Aligned_cols=64 Identities=13% Similarity=0.109 Sum_probs=53.3
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
|..+|..||+|.+... ........+.+|+.++++++||||+++++++.+. +..+++|||+++|+
T Consensus 22 ~~~~~~~~aiK~~~~~---~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----~~~~lv~e~~~~~~ 85 (279)
T cd06619 22 HLLTRRILAVKVIPLD---ITVELQKQIMSELEILYKCDSPYIIGFYGAFFVE----NRISICTEFMDGGS 85 (279)
T ss_pred EcCCCcEEEEEEEecC---CChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEEC----CEEEEEEecCCCCC
Confidence 4567889999998754 1234556788999999999999999999999886 48899999999985
No 64
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=99.45 E-value=4.6e-13 Score=79.11 Aligned_cols=66 Identities=14% Similarity=0.103 Sum_probs=53.2
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..+|..||+|.+..... ........+.+|+.+++.++||||+++++++.+. ..+|+||||+++|+
T Consensus 16 ~~~~~~~~a~K~~~~~~~-~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~----~~~~lv~E~~~~~~ 81 (325)
T cd05594 16 EKATGRYYAMKILKKEVI-VAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTH----DRLCFVMEYANGGE 81 (325)
T ss_pred ECCCCCEEEEEEEEHHHh-hhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcC----CEEEEEEeCCCCCc
Confidence 456889999999986421 1223455678899999999999999999999876 48999999999985
No 65
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.45 E-value=1.3e-12 Score=75.90 Aligned_cols=66 Identities=17% Similarity=0.167 Sum_probs=52.9
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..++..+|+|.+.... .......+.+|+++++.++||||++++++|.+.. ...+|+||||++||+
T Consensus 22 ~~~~~~~~~~k~~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--~~~~~lv~e~~~~~~ 87 (287)
T cd06621 22 LKNTGMIFALKTITTDP---NPDLQKQILRELEINKSCKSPYIVKYYGAFLDES--SSSIGIAMEYCEGGS 87 (287)
T ss_pred ECCCCeEEEEEEEecCC---chHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccC--CCeEEEEEEecCCCC
Confidence 34578899999987542 2345677899999999999999999999986643 246899999999875
No 66
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=99.45 E-value=4.8e-13 Score=79.27 Aligned_cols=66 Identities=14% Similarity=0.095 Sum_probs=52.9
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcC-CCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..+|..||+|.++.... ........+.+|..+++.+ +||||+++++++.+. ..+|+|||||+||+
T Consensus 16 ~~~~~~~~aiK~i~~~~~-~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~----~~~~lv~e~~~~g~ 82 (329)
T cd05588 16 LKKTRRIYAMKVIKKELV-NDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTE----SRLFFVIEFVSGGD 82 (329)
T ss_pred ECCCCCEEEEEEEEHHHh-hhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcC----CEEEEEEeCCCCCC
Confidence 356788999999986421 2223456688999999988 799999999999876 48999999999985
No 67
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=99.45 E-value=5.1e-13 Score=80.50 Aligned_cols=66 Identities=9% Similarity=-0.001 Sum_probs=52.9
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..+|..||+|.+..... ........+.+|+.+++.++||||+++++++.+. ..+|+|||||+||+
T Consensus 64 ~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~----~~~~lv~Ey~~gg~ 129 (370)
T cd05621 64 HKSSQKVYAMKLLSKFEM-IKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDD----KYLYMVMEYMPGGD 129 (370)
T ss_pred ECCCCCEEEEEEEEHHHh-hhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcC----CEEEEEEcCCCCCc
Confidence 356788999999975321 1223445678999999999999999999999876 48999999999985
No 68
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=99.45 E-value=7.3e-13 Score=76.18 Aligned_cols=62 Identities=18% Similarity=0.187 Sum_probs=51.0
Q ss_pred ccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 4 EEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 4 ~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
..+..||+|.++.. ........+.+|+.+++.++||||+++++++... ..+++||||+++|+
T Consensus 31 ~~~~~vaik~~~~~---~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~----~~~~lv~e~~~~~~ 92 (266)
T cd05064 31 KRELPVAIHTLRAG---CSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRG----NTMMIVTEYMSNGA 92 (266)
T ss_pred CceeeEEEEecCCC---CCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecC----CCcEEEEEeCCCCc
Confidence 45678999998754 2334456788999999999999999999998775 47999999999985
No 69
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=99.45 E-value=6.5e-13 Score=81.01 Aligned_cols=62 Identities=15% Similarity=0.180 Sum_probs=50.9
Q ss_pred ccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCC-CcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 4 EEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLE-HPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 4 ~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~-HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
.++..||+|.++... .....+.+.+|+.+|..+. ||||+++++++.+. ..+++|||||.+|+
T Consensus 65 ~~~~~vavK~l~~~~---~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~----~~~~iv~E~~~~g~ 127 (401)
T cd05107 65 QSTMKVAVKMLKSTA---RSSEKQALMSELKIMSHLGPHLNIVNLLGACTKG----GPIYIITEYCRYGD 127 (401)
T ss_pred CCceEEEEEecCCCC---ChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccC----CCcEEEEeccCCCc
Confidence 456789999997542 2334557889999999997 99999999999876 37999999999986
No 70
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=99.44 E-value=5.8e-13 Score=79.66 Aligned_cols=66 Identities=14% Similarity=0.103 Sum_probs=53.6
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..+|..||+|.++.... ........+.+|+.++..++||||+++++.+.+. ..+|+|||||+||+
T Consensus 22 ~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~----~~~~lv~E~~~gg~ 87 (360)
T cd05627 22 KKDTGHIYAMKILRKADM-LEKEQVAHIRAERDILVEADGAWVVKMFYSFQDK----RNLYLIMEFLPGGD 87 (360)
T ss_pred ECCCCCEEEEEEEEHHHH-hhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcC----CEEEEEEeCCCCcc
Confidence 356789999999975422 1233456788999999999999999999999876 48999999999985
No 71
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=99.44 E-value=7.1e-13 Score=77.01 Aligned_cols=66 Identities=6% Similarity=-0.040 Sum_probs=52.8
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..+|..||+|.+..... ........+.+|+.+++.++||||+++++++.+. ..+++|||||++|+
T Consensus 21 ~~~~~~~~avK~~~~~~~-~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~----~~~~lv~e~~~~g~ 86 (285)
T cd05631 21 VRATGKMYACKKLEKKRI-KKRKGEAMALNEKRILEKVNSRFVVSLAYAYETK----DALCLVLTIMNGGD 86 (285)
T ss_pred EecCCceEEEEEeeHhhh-hhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccC----CeEEEEEEecCCCc
Confidence 346789999999976422 1223345678999999999999999999999876 38999999999985
No 72
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=99.44 E-value=1e-12 Score=81.41 Aligned_cols=59 Identities=19% Similarity=0.158 Sum_probs=49.1
Q ss_pred ceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 6 GVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 6 g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..||+|.+... .......+.+|+.+|+.++|||||++++++.+. ..+|||||||+||+
T Consensus 93 ~~~vv~K~~~~~----~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~----~~~~lv~E~~~gg~ 151 (478)
T PTZ00267 93 KEKVVAKFVMLN----DERQAAYARSELHCLAACDHFGIVKHFDDFKSD----DKLLLIMEYGSGGD 151 (478)
T ss_pred CeEEEEEEcccC----CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEEC----CEEEEEEECCCCCC
Confidence 677898877543 234455678899999999999999999999887 48999999999986
No 73
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=99.44 E-value=9.2e-13 Score=74.98 Aligned_cols=64 Identities=19% Similarity=0.112 Sum_probs=52.5
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..+|..||+|.+... ........+.+|+++++.++||||+++++++.+. ..+|+||||+.+|+
T Consensus 16 ~~~~~~~~a~k~~~~~---~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----~~~~lv~e~~~~~~ 79 (252)
T cd05084 16 LRADNTPVAVKSCRET---LPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQK----QPIYIVMELVQGGD 79 (252)
T ss_pred EecCCceEEEEecCcc---CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCC----CCeEEEEeeccCCc
Confidence 3457889999987643 2344567789999999999999999999998776 37899999999875
No 74
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.43 E-value=1.1e-12 Score=77.51 Aligned_cols=65 Identities=14% Similarity=0.127 Sum_probs=54.0
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
|..+|+.||+|.+.... ......+.+.+|+.+++.++||||++++++|.... .+|+||||+.+|+
T Consensus 21 ~~~~~~~vaiK~~~~~~--~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~----~~~~v~e~~~~~~ 85 (328)
T cd08226 21 HTPTGTLVTVRITDLEN--CTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGS----WLWVISPFMAYGS 85 (328)
T ss_pred EcCCCcEEEEEEecccc--CCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCC----ceEEEEecccCCC
Confidence 45689999999987642 23344578899999999999999999999998863 7899999999875
No 75
>KOG0201|consensus
Probab=99.43 E-value=1.6e-14 Score=88.01 Aligned_cols=65 Identities=22% Similarity=0.292 Sum_probs=57.9
Q ss_pred CCcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 1 MDTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 1 ~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+|..|++.||+|.+.++. .....+.+++|+.+|.++++|||.++|+.|... ..+|++||||.||+
T Consensus 33 ~d~~t~k~vAiKii~Le~---~~deIediqqei~~Ls~~~~~~it~yygsyl~g----~~LwiiMey~~gGs 97 (467)
T KOG0201|consen 33 IDNKTKKVVAIKIIDLEE---AEDEIEDIQQEISVLSQCDSPNITEYYGSYLKG----TKLWIIMEYCGGGS 97 (467)
T ss_pred eeccccceEEEEEechhh---cchhhHHHHHHHHHHHhcCcchHHhhhhheeec----ccHHHHHHHhcCcc
Confidence 367899999999999873 456778899999999999999999999999987 48999999999996
No 76
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.43 E-value=2.5e-12 Score=74.27 Aligned_cols=64 Identities=19% Similarity=0.245 Sum_probs=53.8
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..++..||+|.+... ........+.+|+.+++.++||||+++++++.+. ...|+||||++||+
T Consensus 25 ~~~~~~~vaiK~~~~~---~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----~~~~lv~e~~~~~~ 88 (277)
T cd06640 25 DNRTQQVVAIKIIDLE---EAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKG----TKLWIIMEYLGGGS 88 (277)
T ss_pred EccCCEEEEEEEEecc---ccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEEC----CEEEEEEecCCCCc
Confidence 3457889999998754 2234567889999999999999999999999886 48999999999985
No 77
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=99.43 E-value=5.4e-13 Score=80.44 Aligned_cols=62 Identities=19% Similarity=0.203 Sum_probs=50.9
Q ss_pred ccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcC-CCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 4 EEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 4 ~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
.++..||+|.++... .......+.+|+.+++.+ +||||+++++++... ..+|+|||||++|+
T Consensus 66 ~~~~~vavK~~~~~~---~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~----~~~~lv~ey~~~g~ 128 (374)
T cd05106 66 DNVLRVAVKMLKASA---HTDEREALMSELKILSHLGQHKNIVNLLGACTHG----GPVLVITEYCCYGD 128 (374)
T ss_pred cccceeEEEeccCCC---CHHHHHHHHHHHHHHHhhccCCceeeEeeEecCC----CCeEEeHhhccCCc
Confidence 345689999997542 334567788999999999 899999999999876 37999999999986
No 78
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=99.43 E-value=4.3e-13 Score=77.63 Aligned_cols=65 Identities=20% Similarity=0.206 Sum_probs=52.9
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
++.+|..||+|.+.... ........+.+|+.+++.++||||+++++++... ..+|+||||+.+|+
T Consensus 22 ~~~~~~~~avK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----~~~~lv~e~~~~~~ 86 (287)
T cd07848 22 HKETKEIVAIKKFKDSE--ENEEVKETTLRELKMLRTLKQENIVELKEAFRRR----GKLYLVFEYVEKNM 86 (287)
T ss_pred ECCCCcEEEEEEEeccc--ccccchhhHHHHHHHHHhCCCccccchhhhEecC----CEEEEEEecCCCCH
Confidence 45678899999997642 1233456788999999999999999999999776 48999999998873
No 79
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=99.42 E-value=9.8e-13 Score=78.51 Aligned_cols=62 Identities=15% Similarity=0.054 Sum_probs=50.3
Q ss_pred ceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 6 GVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 6 g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..||+|.+..... ........+.+|+.+++.++||||+++++++.+. ..+|+|||||.||+
T Consensus 56 ~~~vavK~~~~~~~-~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~----~~~~lv~Ey~~~g~ 117 (340)
T PTZ00426 56 FPPVAIKRFEKSKI-IKQKQVDHVFSERKILNYINHPFCVNLYGSFKDE----SYLYLVLEFVIGGE 117 (340)
T ss_pred CeEEEEEEEEHHHh-hhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeC----CEEEEEEeCCCCCc
Confidence 36899999975421 1223456788999999999999999999999886 48999999999985
No 80
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=99.42 E-value=2.4e-12 Score=74.29 Aligned_cols=62 Identities=19% Similarity=0.228 Sum_probs=52.5
Q ss_pred cccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 3 ~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
..++..+|+|.+... .....+.+.+|+.++++++||||+++++.+.+. ..+|+||||+++|+
T Consensus 27 ~~~~~~~~iK~~~~~----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----~~~~lv~e~~~~~~ 88 (280)
T cd06611 27 KETGLFAAAKIIQIE----SEEELEDFMVEIDILSECKHPNIVGLYEAYFYE----NKLWILIEFCDGGA 88 (280)
T ss_pred cCCCcEEEEEEEeeC----CHHHHHHHHHHHHHHHhCCCCceeEEEEEEecC----CeEEEEeeccCCCc
Confidence 457889999998753 344567788999999999999999999999876 48999999999885
No 81
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.42 E-value=8.9e-13 Score=77.19 Aligned_cols=64 Identities=16% Similarity=0.173 Sum_probs=53.6
Q ss_pred cccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 3 ~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
..+|..||+|++.... ........+.+|+.+++.++||||+++++++.+. ...|++|||+++|+
T Consensus 22 ~~~~~~~avK~~~~~~--~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~----~~~~~~~e~~~~~~ 85 (314)
T cd08216 22 KPTNTLVAVKKINLDS--CSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVD----SELYVVSPLMAYGS 85 (314)
T ss_pred cCCCCEEEEEEEeccc--cchhHHHHHHHHHHHHHhcCCcchhhhhheeecC----CeEEEEEeccCCCC
Confidence 4578999999998642 2334567799999999999999999999999876 37999999999885
No 82
>KOG0198|consensus
Probab=99.42 E-value=8.9e-13 Score=78.41 Aligned_cols=64 Identities=20% Similarity=0.341 Sum_probs=51.3
Q ss_pred cccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 3 ~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
.++|...|+|.+...+ . ...+.+.+|+.+|++|+|||||+++|....... ..++|+|||+++||
T Consensus 39 ~~~g~~~AvK~v~~~~---~-~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~--~~~~i~mEy~~~Gs 102 (313)
T KOG0198|consen 39 KKTGELMAVKSVELED---S-PTSESLEREIRILSRLNHPNIVQYYGSSSSREN--DEYNIFMEYAPGGS 102 (313)
T ss_pred cCCCcceeeeeeeccc---c-hhHHHHHHHHHHHHhCCCCCEEeeCCccccccC--eeeEeeeeccCCCc
Confidence 4568899999998752 1 226778999999999999999999997544420 26899999999997
No 83
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.41 E-value=2e-12 Score=74.87 Aligned_cols=63 Identities=13% Similarity=0.179 Sum_probs=52.8
Q ss_pred cccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 3 ~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
..+|..||+|.+.... .......+.+|+++++.++||||+++++++.+. ..+|+||||+++|+
T Consensus 27 ~~~~~~~a~k~~~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~----~~~~lv~e~~~~~~ 89 (284)
T cd06620 27 IPTGTVMAKKVVHIGA---KSSVRKQILRELQIMHECRSPYIVSFYGAFLNE----NNICMCMEFMDCGS 89 (284)
T ss_pred cCCCcEEEEEEEEecC---cchHHHHHHHHHHHHHHcCCCCcceEeeeEecC----CEEEEEEecCCCCC
Confidence 4568899999987542 234567789999999999999999999999886 48999999999885
No 84
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=99.41 E-value=1.4e-12 Score=75.82 Aligned_cols=66 Identities=15% Similarity=0.118 Sum_probs=53.1
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..+++.||+|.+..... ........+.+|+++++.++||||+++++++.+. ..+|+||||+++|+
T Consensus 22 ~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----~~~~~v~e~~~~~~ 87 (290)
T cd05580 22 HKGSGKYYALKILSKAKI-VKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDD----SNLYLVMEYVPGGE 87 (290)
T ss_pred EcCCCCEEEEEEEEHHHh-hhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcC----CeEEEEEecCCCCC
Confidence 345788999999875421 1223456788999999999999999999999876 48999999998875
No 85
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=99.41 E-value=2.7e-12 Score=73.50 Aligned_cols=65 Identities=18% Similarity=0.240 Sum_probs=53.0
Q ss_pred cccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 3 ~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
..+|..||+|.+..... ........+.+|+.+++.++||||+++++++.+. ...|++|||+++|+
T Consensus 24 ~~~~~~~~iK~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----~~~~~v~e~~~~~~ 88 (267)
T cd08228 24 LLDRKPVALKKVQIFEM-MDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIED----NELNIVLELADAGD 88 (267)
T ss_pred eCCCCEEEEEEeecccc-CCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEEC----CeEEEEEEecCCCc
Confidence 45788999999875422 2334556788999999999999999999999876 48899999999885
No 86
>KOG0577|consensus
Probab=99.41 E-value=5.3e-14 Score=89.19 Aligned_cols=66 Identities=21% Similarity=0.322 Sum_probs=56.6
Q ss_pred CCcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCC
Q psy8984 1 MDTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETP 71 (72)
Q Consensus 1 ~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~G 71 (72)
+|..+...||||++..+.. .+....+.+..|+..|++++|||+|.+.++|..+. ..|||||||-|.
T Consensus 46 rd~~n~evVAIKKMsySGK-Qs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~----TaWLVMEYClGS 111 (948)
T KOG0577|consen 46 RDVRNSEVVAIKKMSYSGK-QSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREH----TAWLVMEYCLGS 111 (948)
T ss_pred eccCccceeeeeecccccc-ccHHHHHHHHHHHHHHHhccCCCcccccceeeccc----hHHHHHHHHhcc
Confidence 3667888999999998743 45567889999999999999999999999998873 789999999763
No 87
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=99.41 E-value=1.2e-12 Score=77.71 Aligned_cols=66 Identities=12% Similarity=0.044 Sum_probs=52.9
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..+|..||+|.+..... ........+.+|+.+++.++||||+++++++.+. ..+|+||||++||+
T Consensus 22 ~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~----~~~~lv~e~~~g~~ 87 (331)
T cd05597 22 MKNTGQVYAMKILNKWEM-LKRAETACFREERDVLVNGDRRWITNLHYAFQDE----NNLYLVMDYYVGGD 87 (331)
T ss_pred ECCCCCEEEEEEEEHHHH-hhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecC----CeEEEEEecCCCCc
Confidence 356788999999975321 1223456688899999999999999999999876 48999999999985
No 88
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=99.41 E-value=1.3e-12 Score=78.79 Aligned_cols=66 Identities=9% Similarity=-0.002 Sum_probs=52.9
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..++..||+|.+..... ........+.+|+.+++.++||||+++++++.+. ..+|+|||||+||+
T Consensus 64 ~~~~~~~~aiK~i~~~~~-~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~----~~~~lv~Ey~~gg~ 129 (371)
T cd05622 64 HKSTRKVYAMKLLSKFEM-IKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD----RYLYMVMEYMPGGD 129 (371)
T ss_pred ECCCCcEEEEEEEEHHHh-hhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcC----CEEEEEEcCCCCCc
Confidence 456788999999975321 1223445678899999999999999999999876 48999999999985
No 89
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=99.41 E-value=3.4e-12 Score=73.78 Aligned_cols=65 Identities=23% Similarity=0.293 Sum_probs=51.9
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..+|..||+|.+... .......+.+|+++++.++||||+++++++...+ ...+++||||+++|+
T Consensus 29 ~~~~~~~v~iK~~~~~----~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--~~~~~lv~e~~~~~~ 93 (284)
T cd05081 29 QDNTGEVVAVKKLQHS----TAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAG--RRNLRLVMEYLPYGS 93 (284)
T ss_pred cCCCCcEEEEEEeccC----CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCC--CCceEEEEEecCCCC
Confidence 4567889999998653 2344567899999999999999999999876432 246899999999886
No 90
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.41 E-value=3.5e-12 Score=73.64 Aligned_cols=63 Identities=19% Similarity=0.243 Sum_probs=52.2
Q ss_pred cccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 3 ~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
..+|..||+|.+.... .......+.+|+.+++.++||||+++++++.+. ...|+||||+++|+
T Consensus 26 ~~~~~~~aiK~~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~----~~~~lv~e~~~~~~ 88 (277)
T cd06641 26 NRTQKVVAIKIIDLEE---AEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKD----TKLWIIMEYLGGGS 88 (277)
T ss_pred CCCCcEEEEEEecccc---chHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeC----CeEEEEEEeCCCCc
Confidence 4578899999886542 234456788999999999999999999999876 47999999999875
No 91
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=99.40 E-value=2.3e-12 Score=73.63 Aligned_cols=65 Identities=20% Similarity=0.280 Sum_probs=53.4
Q ss_pred cccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 3 ~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
..+|..||+|.++.... ........+.+|+.++++++||||+++++++.+. +..+++|||+++|+
T Consensus 24 ~~~~~~~~ik~~~~~~~-~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~----~~~~lv~e~~~~~~ 88 (267)
T cd08224 24 LLDGRVVALKKVQIFEM-MDAKARQDCLKEIDLLKQLDHPNVIKYLASFIEN----NELNIVLELADAGD 88 (267)
T ss_pred cCCCCEEEEEEeecccc-cchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecC----CeEEEEEecCCCCC
Confidence 45788999999875432 2334467789999999999999999999999876 47899999999885
No 92
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=99.40 E-value=2.4e-12 Score=73.18 Aligned_cols=64 Identities=14% Similarity=0.246 Sum_probs=53.4
Q ss_pred cccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 3 ~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
..+|..||+|.+.... ........+.+|+.+++.++||||+++++++.+. ...|+||||++||+
T Consensus 22 ~~~~~~~~~k~~~~~~--~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----~~~~lv~e~~~~~~ 85 (256)
T cd08529 22 KADKRVYAMKQIDLSK--MNRREREEAIDEARVLAKLDSSYIIRYYESFLDK----GKLNIVMEYAENGD 85 (256)
T ss_pred cCCCcEEEEEEeehhh--CCHHHHHHHHHHHHHHHhcCCCCeehheeeeccC----CEEEEEEEeCCCCc
Confidence 4578899999997643 2344567789999999999999999999999876 48999999999875
No 93
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=99.40 E-value=3.9e-12 Score=72.50 Aligned_cols=64 Identities=17% Similarity=0.272 Sum_probs=53.0
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..+|..||+|.++... .....+.+.+|+.+++.++||||+++++++.+. ..+|++|||+++|+
T Consensus 21 ~~~~~~~~~iK~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----~~~~lv~e~~~~~~ 84 (255)
T cd08219 21 HVNSDQKYAMKEIRLPK---SSSAVEDSRKEAVLLAKMKHPNIVAFKESFEAD----GHLYIVMEYCDGGD 84 (255)
T ss_pred EcCCCceEEEEEEEcCc---chHHHHHHHHHHHHHHhCCCCCcceEEEEEEEC----CEEEEEEeeCCCCc
Confidence 34678899999987642 234556788999999999999999999999876 48999999999885
No 94
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=99.40 E-value=1.2e-12 Score=77.36 Aligned_cols=66 Identities=12% Similarity=0.069 Sum_probs=53.7
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
++.+|..||+|.++.... ........+.+|+.+++.++||||+++++++.+. ..+|+||||+++|+
T Consensus 22 ~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~----~~~~lv~e~~~~~~ 87 (330)
T cd05601 22 EKATGDIYAMKVMKKSVL-LAQETVSFFEEERDILSISNSPWIPQLQYAFQDK----DNLYLVMEYQPGGD 87 (330)
T ss_pred ECCCCCEEEEEEEEHHHh-hhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecC----CeEEEEECCCCCCC
Confidence 456789999999986421 1233556788999999999999999999999876 48999999999985
No 95
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=99.40 E-value=1.3e-12 Score=77.22 Aligned_cols=66 Identities=12% Similarity=0.131 Sum_probs=49.6
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHH---hcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENL---TQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l---~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..+|..||+|.++.... ........+.+|+.++ +.++||||+++++++.+. ..+|+|||||+||+
T Consensus 20 ~~~~~~~~aiK~~~~~~~-~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~----~~~~lv~E~~~~~~ 88 (324)
T cd05589 20 YKKTGELYAIKALKKGDI-IARDEVESLMCEKRIFETANSERHPFLVNLFACFQTE----DHVCFVMEYAAGGD 88 (324)
T ss_pred ECCCCCEEEEEEEEHHHh-hhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcC----CEEEEEEcCCCCCc
Confidence 356789999999986421 1223345666776554 677899999999999876 48999999999985
No 96
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=99.40 E-value=1.3e-12 Score=77.82 Aligned_cols=63 Identities=11% Similarity=0.084 Sum_probs=50.9
Q ss_pred ccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcC-CCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 4 EEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 4 ~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
.+++.||+|.++... .......+.+|+.+|+++ +||||+++++++.... ..++++||||++|+
T Consensus 35 ~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~---~~~~lv~ey~~~g~ 98 (343)
T cd05103 35 ATCRTVAVKMLKEGA---THSEHRALMSELKILIHIGHHLNVVNLLGACTKPG---GPLMVIVEFCKFGN 98 (343)
T ss_pred ccceeEEEEEeccCC---ChHHHHHHHHHHHHHHhccCCccHhhhcceeecCC---CceEEEEeccCCCc
Confidence 567899999997532 234456788999999999 7899999999887653 46899999999986
No 97
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=99.40 E-value=1.6e-12 Score=74.74 Aligned_cols=63 Identities=22% Similarity=0.295 Sum_probs=49.1
Q ss_pred cccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 3 ~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
...+..||+|.++.. ........+.+|++.+++++||||+++++++... ..+++|||||++|+
T Consensus 25 ~~~~~~V~vk~~~~~---~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~----~~~~lv~e~~~~g~ 87 (259)
T PF07714_consen 25 NDKNQPVAVKILKPS---SSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIEN----EPLFLVMEYCPGGS 87 (259)
T ss_dssp TSSEEEEEEEEESTT---SSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESS----SSEEEEEE--TTEB
T ss_pred CCCCEEEEEEEeccc---cccccceeeeeccccccccccccccccccccccc----cccccccccccccc
Confidence 345788999999542 2345578899999999999999999999999865 36999999999875
No 98
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=99.40 E-value=1.7e-12 Score=76.67 Aligned_cols=66 Identities=17% Similarity=0.192 Sum_probs=49.6
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHH-HHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFE-NLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~-~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..+|..||+|.+..... ........+.+|.. +++.++||||+++++.+.+. ..+|+||||++||+
T Consensus 16 ~~~~~~~vaiK~~~~~~~-~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~----~~~~lv~e~~~~g~ 82 (323)
T cd05575 16 HKADGKFYAVKVLQKKAI-LKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTA----DKLYFVLDYVNGGE 82 (323)
T ss_pred ECCCCCEEEEEEEEHHHH-hhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeC----CEEEEEEcCCCCCC
Confidence 456889999999976422 11223345556655 56789999999999999876 48999999999985
No 99
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=99.40 E-value=1.5e-12 Score=75.80 Aligned_cols=62 Identities=18% Similarity=0.185 Sum_probs=50.3
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEET 70 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~ 70 (72)
+..+|..||+|.++... .......+.+|+.+++.++||||+++++++.+. ..+|+||||+++
T Consensus 26 ~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~----~~~~lv~e~~~~ 87 (288)
T cd07871 26 SKLTENLVALKEIRLEH---EEGAPCTAIREVSLLKNLKHANIVTLHDIIHTE----RCLTLVFEYLDS 87 (288)
T ss_pred ECCCCCEEEEEEecccc---cCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCC----CeEEEEEeCCCc
Confidence 35678899999997642 122345678999999999999999999999876 489999999975
No 100
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=99.40 E-value=2.6e-12 Score=73.86 Aligned_cols=62 Identities=16% Similarity=0.149 Sum_probs=49.8
Q ss_pred ccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 4 EEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 4 ~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
.++..+|+|.++... .......+.+|+.+++.++||||+++++++.+. ..+++||||+++|+
T Consensus 20 ~~~~~~~~k~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----~~~~lv~e~~~~g~ 81 (269)
T cd05087 20 YTPAQVVVKELRVSA---SVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEV----TPYLLVMEFCPLGD 81 (269)
T ss_pred CCceEEEEEecCCCC---ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCC----CCcEEEEECCCCCc
Confidence 456679999887542 223445788999999999999999999998775 37899999999885
No 101
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=99.39 E-value=1.4e-12 Score=76.25 Aligned_cols=63 Identities=21% Similarity=0.192 Sum_probs=50.2
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETP 71 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~G 71 (72)
++.+|..||+|.++... .......+.+|+.+++.++||||+++++++.+. ..+|+||||+.++
T Consensus 26 ~~~~~~~~aiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~----~~~~lv~e~~~~~ 88 (303)
T cd07869 26 SKVNGKLVALKVIRLQE---EEGTPFTAIREASLLKGLKHANIVLLHDIIHTK----ETLTLVFEYVHTD 88 (303)
T ss_pred ECCCCCEEEEEEecccc---ccccchhHHHHHHHHhhCCCCCcCeEEEEEecC----CeEEEEEECCCcC
Confidence 34578899999997542 122334577899999999999999999999876 4899999999753
No 102
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=99.39 E-value=6.8e-13 Score=78.71 Aligned_cols=66 Identities=18% Similarity=0.184 Sum_probs=53.5
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..+|..||+|++..... ........+.+|+.+++.++||||+++++++.+. ..+|+||||+++|+
T Consensus 22 ~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~----~~~~lv~e~~~~~~ 87 (350)
T cd05573 22 DKDTGQVYAMKVLRKSDM-IKRNQIAHVRAERDILADADSPWIVKLYYSFQDE----EHLYLVMEYMPGGD 87 (350)
T ss_pred ECCCCCEEEEEEEEHHHH-hhccHHHHHHHHHHHHHhcCCCCccchhhheecC----CeEEEEEcCCCCCC
Confidence 345789999999986432 1223456788999999999999999999999876 48999999999885
No 103
>KOG0616|consensus
Probab=99.39 E-value=5.3e-13 Score=78.74 Aligned_cols=66 Identities=17% Similarity=0.138 Sum_probs=55.9
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
++.+|..+|+|.+++... ......+....|..+|+.+.||+++++++.|.+.. .+||||||.+||.
T Consensus 65 ~k~~g~yYAmKvL~k~~v-VklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~----~lymvmeyv~GGE 130 (355)
T KOG0616|consen 65 EKHSGNYYAMKVLDKQKV-VKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNS----NLYMVMEYVPGGE 130 (355)
T ss_pred EccCCceeehhhcCHHHH-HHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCC----eEEEEEeccCCcc
Confidence 467899999999987643 23345677889999999999999999999999974 8999999999984
No 104
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=99.39 E-value=2.2e-12 Score=76.50 Aligned_cols=66 Identities=18% Similarity=0.128 Sum_probs=52.5
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcC-CCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..+|..||+|.++.... ........+.+|+.++.++ +||||+++++++.+. ..+|+|||||++|+
T Consensus 16 ~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~----~~~~lv~E~~~~~~ 82 (329)
T cd05618 16 LKKTERIYAMKVVKKELV-NDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTE----SRLFFVIEYVNGGD 82 (329)
T ss_pred ECCCCCEEEEEEEEhhHh-cchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeC----CEEEEEEeCCCCCC
Confidence 456788999999986422 2234456678899988776 899999999999886 48999999999985
No 105
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=99.39 E-value=1.3e-12 Score=75.35 Aligned_cols=64 Identities=20% Similarity=0.258 Sum_probs=52.6
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..+|..||+|.+.... .......+.+|+.+++.++||||+++++++.+. +..|+||||+++|+
T Consensus 25 ~~~~~~~vaiK~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----~~~~lv~e~~~~~~ 88 (277)
T cd06642 25 DNRTKEVVAIKIIDLEE---AEDEIEDIQQEITVLSQCDSPYITRYYGSYLKG----TKLWIIMEYLGGGS 88 (277)
T ss_pred EcCCCeEEEEEEecccc---chHHHHHHHHHHHHHHcCCCCccHhhhcccccC----CceEEEEEccCCCc
Confidence 34578899999987542 234556789999999999999999999999876 47999999999875
No 106
>KOG0196|consensus
Probab=99.39 E-value=8.2e-13 Score=85.41 Aligned_cols=59 Identities=19% Similarity=0.297 Sum_probs=51.6
Q ss_pred eEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 7 VEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 7 ~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
..||||.++.. .....+..|+.|..||.+++|||||+|.|+.... +.+.||+|||++|+
T Consensus 658 ~~VAIKTLK~G---ytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks----~PvMIiTEyMENGs 716 (996)
T KOG0196|consen 658 ITVAIKTLKAG---YTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKS----KPVMIITEYMENGS 716 (996)
T ss_pred eeEEEeeeccC---ccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecC----ceeEEEhhhhhCCc
Confidence 57999999864 3456778899999999999999999999999876 47899999999996
No 107
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=99.39 E-value=4e-12 Score=72.57 Aligned_cols=67 Identities=21% Similarity=0.313 Sum_probs=52.9
Q ss_pred CcccceEEEEEEEEeccccC-chHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKN-FKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..+|..||+|.+....... .......+.+|+.++++++||||+++++++.+. ..+|++|||+++|+
T Consensus 23 ~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~----~~~~~v~e~~~~~~ 90 (263)
T cd06625 23 DVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDD----ETLSIFMEYMPGGS 90 (263)
T ss_pred EcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccC----CeEEEEEEECCCCc
Confidence 45678999999987642111 112345788999999999999999999999876 38999999999875
No 108
>KOG0662|consensus
Probab=99.39 E-value=2.6e-13 Score=76.13 Aligned_cols=62 Identities=18% Similarity=0.258 Sum_probs=54.5
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEE 69 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~ 69 (72)
+++|++.||+|.++..+ .+...+...+|||.+|+.|+|.|||+++++..++ +.+-+|+|||+
T Consensus 23 n~~t~eivalkrvrldd--ddegvpssalreicllkelkhknivrl~dvlhsd----kkltlvfe~cd 84 (292)
T KOG0662|consen 23 NRETHEIVALKRVRLDD--DDEGVPSSALREICLLKELKHKNIVRLHDVLHSD----KKLTLVFEFCD 84 (292)
T ss_pred cCCccceEEEEEEeccC--CCCCCcHHHHHHHHHHHHhhhcceeehhhhhccC----ceeEEeHHHhh
Confidence 57889999999999874 3556678899999999999999999999998876 48999999996
No 109
>KOG1989|consensus
Probab=99.39 E-value=1e-12 Score=84.56 Aligned_cols=66 Identities=17% Similarity=0.192 Sum_probs=50.9
Q ss_pred cccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCC-Ccceeeeeeee-eeC--CCCCCeEEEEEEecCCCC
Q psy8984 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLE-HPNIVKFHRYW-TDT--HNDKPRARFLGEYEETPT 72 (72)
Q Consensus 3 ~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~-HpnIv~l~~~~-~~~--~~~~~~~~lv~E~~~~Gs 72 (72)
...|..||+|++-. .+....+.+.+||++|+.|+ |||||.|++.. ... .++.-+++|+||||.||+
T Consensus 59 ~~~~~~~AlKrm~~----~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~EvllLmEyC~gg~ 128 (738)
T KOG1989|consen 59 VKGGKKYALKRMYV----NDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEVLLLMEYCKGGS 128 (738)
T ss_pred cCCCceeeeeeeec----CCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeEEEeehhhccCCc
Confidence 34458899999865 35677889999999999996 99999999942 221 222457899999999874
No 110
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.38 E-value=1.4e-12 Score=75.46 Aligned_cols=63 Identities=17% Similarity=0.199 Sum_probs=52.5
Q ss_pred cccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 3 ~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
..+|..||+|.+... ........+.+|+.+++.++||||+++++++... +.+|+||||+++|+
T Consensus 23 ~~~~~~~a~k~~~~~---~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~----~~~~lv~e~~~~~~ 85 (286)
T cd06622 23 RPTGVTMAMKEIRLE---LDESKFNQIIMELDILHKAVSPYIVDFYGAFFIE----GAVYMCMEYMDAGS 85 (286)
T ss_pred cCCCcEEEEEEeecc---cCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecC----CeEEEEEeecCCCC
Confidence 457899999998753 2334456788999999999999999999998876 48999999999875
No 111
>KOG1095|consensus
Probab=99.38 E-value=1.4e-12 Score=86.11 Aligned_cols=59 Identities=19% Similarity=0.222 Sum_probs=51.7
Q ss_pred eEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 7 VEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 7 ~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
..||+|.++.. .+.+....|.+|..+|++++|||||+++|++.+.. ..+|++|||.||+
T Consensus 723 ~~vaiK~l~~~---~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~----~~~i~leyM~gGD 781 (1025)
T KOG1095|consen 723 IQVAVKSLKRL---SSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSG----PPLILLEYMEGGD 781 (1025)
T ss_pred eEEEEEecccc---CCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCC----CcEEEehhcccCc
Confidence 46999998764 45677889999999999999999999999998863 6899999999996
No 112
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=99.38 E-value=5.6e-12 Score=72.92 Aligned_cols=64 Identities=17% Similarity=0.178 Sum_probs=50.6
Q ss_pred ccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 4 EEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 4 ~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
.++..||+|.+... ........+.+|+++|+.++||||+++++++.... ...+|++|||+++|+
T Consensus 31 ~~~~~vaiK~~~~~---~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~~~lv~e~~~~~~ 94 (283)
T cd05080 31 GTGEMVAVKTLKRE---CGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQG--GKGLQLIMEYVPLGS 94 (283)
T ss_pred CCCceEEEEEeccc---cChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC--CceEEEEecCCCCCC
Confidence 46778999998753 22334567889999999999999999999876542 146899999999885
No 113
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.38 E-value=6e-12 Score=72.16 Aligned_cols=63 Identities=13% Similarity=0.158 Sum_probs=52.0
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..++..||+|.++... ......+.+|+.+++.++||||+++++++.+. ..+|++|||+++|+
T Consensus 30 ~~~~~~~~~ik~~~~~~----~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~----~~~~lv~e~~~~~~ 92 (267)
T cd06645 30 NVNTGELAAIKVIKLEP----GEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRR----DKLWICMEFCGGGS 92 (267)
T ss_pred EcCCCcEEEEEEEecCc----hhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeC----CEEEEEEeccCCCc
Confidence 34678899999987642 23345678999999999999999999999876 48999999999875
No 114
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=99.38 E-value=3.4e-12 Score=84.07 Aligned_cols=66 Identities=17% Similarity=0.120 Sum_probs=54.3
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
|..+|..||+|+++.... ........+.+|+++++.++||||+++++++.+. ...|++|||++||+
T Consensus 23 d~~tg~~VAIK~I~~~l~-~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~----~~lyLVMEY~eGGS 88 (932)
T PRK13184 23 DPVCSRRVALKKIREDLS-ENPLLKKRFLREAKIAADLIHPGIVPVYSICSDG----DPVYYTMPYIEGYT 88 (932)
T ss_pred ECCCCcEEEEEEECcccc-cCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeC----CEEEEEEEcCCCCC
Confidence 456789999999975321 2334566789999999999999999999999876 48999999999986
No 115
>KOG0033|consensus
Probab=99.38 E-value=4.4e-14 Score=81.99 Aligned_cols=65 Identities=15% Similarity=0.182 Sum_probs=55.5
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+.+||+.+|+|.|+... ......+.+.||+.|.+.|+||||++|++.+.+. ...|||+|+|+||+
T Consensus 32 ~~~tg~~fa~kiin~~k--~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~----~~~ylvFe~m~G~d 96 (355)
T KOG0033|consen 32 HKTTGLEFAAKIINTKK--LSARDFQKLEREARICRKLQHPNIVRLHDSIQEE----SFHYLVFDLVTGGE 96 (355)
T ss_pred hccchHHHHHHHhhhhh--hccccHHHHHHHHHHHHhcCCCcEeehhhhhccc----ceeEEEEecccchH
Confidence 56899999999998653 2334678899999999999999999999998776 37899999999984
No 116
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=99.38 E-value=5e-12 Score=72.03 Aligned_cols=64 Identities=22% Similarity=0.398 Sum_probs=52.6
Q ss_pred cccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 3 ~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
..+|..||+|.+..... .......+.+|+.+++.++||||+++++++.+. ...|+||||+++|+
T Consensus 22 ~~~~~~~~ik~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~----~~~~lv~e~~~~~~ 85 (256)
T cd08218 22 KEDGKQYVIKEINISKM--SPKEREESRKEVAVLSNMKHPNIVQYQESFEEN----GNLYIVMDYCEGGD 85 (256)
T ss_pred cCCCCEEEEEEEEhHhC--ChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCC----CeEEEEEecCCCCc
Confidence 45788999999976422 234456789999999999999999999998776 48999999999875
No 117
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=99.38 E-value=4.8e-12 Score=83.92 Aligned_cols=67 Identities=12% Similarity=0.272 Sum_probs=54.0
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..++..||+|.+.... ........+.+|+.+|+.|+|||||+++++|.+.. ...+|||||||++|+
T Consensus 34 dk~tg~~vAlKvIk~~~--l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~--~~~lyIVMEY~~gGS 100 (1021)
T PTZ00266 34 HKRTQEFFCWKAISYRG--LKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKA--NQKLYILMEFCDAGD 100 (1021)
T ss_pred ECCCCeEEEEEEEeccc--cCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecC--CCEEEEEEeCCCCCc
Confidence 45678899999997642 23445677899999999999999999999987643 246899999999985
No 118
>KOG0661|consensus
Probab=99.38 E-value=5.4e-14 Score=86.64 Aligned_cols=62 Identities=23% Similarity=0.300 Sum_probs=51.5
Q ss_pred cccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCC-CcceeeeeeeeeeCCCCCCeEEEEEEecCC
Q psy8984 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLE-HPNIVKFHRYWTDTHNDKPRARFLGEYEET 70 (72)
Q Consensus 3 ~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~-HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~ 70 (72)
.++|..||||+++.. -.......-+||+..|++|+ |||||++.+++.+.+ +.+|+|||||+.
T Consensus 32 ~~~~~~VAIK~MK~K---f~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~---~~L~fVfE~Md~ 94 (538)
T KOG0661|consen 32 KETGELVAIKKMKKK---FYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDND---RILYFVFEFMDC 94 (538)
T ss_pred cCCCceeeHHHHHhh---hccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccC---ceEeeeHHhhhh
Confidence 578889999999864 23344555689999999998 999999999999875 489999999974
No 119
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=99.37 E-value=4.2e-12 Score=73.34 Aligned_cols=66 Identities=8% Similarity=-0.021 Sum_probs=52.3
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..+|..||+|.+..... ........+.+|+.+|+.++||||+++++++... ..+|+||||+++|+
T Consensus 14 ~~~~~~~~~ik~~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~----~~~~lv~e~~~~~~ 79 (277)
T cd05577 14 VKATGKMYACKKLDKKRL-KKRKGEQMALNEKKILEKVSSRFIVSLAYAFETK----DDLCLVMTLMNGGD 79 (277)
T ss_pred EcCCCcEEEEEEEehhhh-hhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecC----CeEEEEEecCCCCc
Confidence 345788999999975421 1223455667899999999999999999999876 37999999999875
No 120
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=99.37 E-value=2.7e-12 Score=75.72 Aligned_cols=66 Identities=18% Similarity=0.203 Sum_probs=49.5
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHH-HHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFE-NLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~-~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..+|..||+|.+..... ........+.+|.. +++.++||||+++++++.+. ..+|+|||||+||+
T Consensus 16 ~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~----~~~~lv~e~~~~~~ 82 (321)
T cd05603 16 RKSDGSFYAVKVLQKKTI-LKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTA----EKLYFVLDYVNGGE 82 (321)
T ss_pred ECCCCCEEEEEEEEHHHH-HHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcC----CEEEEEEcCCCCCC
Confidence 356788999999976421 11223445556654 67889999999999998876 48999999999985
No 121
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.37 E-value=6e-12 Score=72.16 Aligned_cols=62 Identities=16% Similarity=0.126 Sum_probs=51.1
Q ss_pred cccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 3 ~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
..+|..||+|.+.... ......+.+|+.+++.++||||+++++++... ..+|+||||+++|+
T Consensus 31 ~~~~~~~aik~~~~~~----~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~----~~~~iv~e~~~~~~ 92 (267)
T cd06646 31 LHTGELAAVKIIKLEP----GDDFSLIQQEIFMVKECKHCNIVAYFGSYLSR----EKLWICMEYCGGGS 92 (267)
T ss_pred CCCCeEEEEEEEecCc----cchHHHHHHHHHHHHhcCCCCeeeeeEEEEeC----CEEEEEEeCCCCCc
Confidence 4678899999987532 23345678999999999999999999999876 48999999999875
No 122
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=99.37 E-value=4.2e-12 Score=73.52 Aligned_cols=59 Identities=14% Similarity=0.137 Sum_probs=47.9
Q ss_pred ceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 6 GVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 6 g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
...||+|.+... .......+.+|+.+++.++||||+++++++.+. ...|+|||||++|+
T Consensus 44 ~~~v~~k~~~~~----~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~----~~~~lv~ey~~~g~ 102 (274)
T cd05076 44 ELRVVLKVLDPS----HRDIALAFFETASLMSQVSHIHLAFVHGVCVRG----SENIMVEEFVEHGP 102 (274)
T ss_pred eeeEEEEecChH----HHHHHHHHHHHHHHHhcCCCCCeeeEEEEEEeC----CceEEEEecCCCCc
Confidence 346899988643 223456688899999999999999999999876 37899999999985
No 123
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.37 E-value=1.1e-12 Score=74.82 Aligned_cols=66 Identities=11% Similarity=0.060 Sum_probs=53.7
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..+|..||+|.+..... ........+.+|++++++++||||+++++++.+. ..+|+|+||+.||+
T Consensus 21 ~~~~~~~~~ik~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----~~~~lv~e~~~~~~ 86 (258)
T cd05578 21 KRDTKKMFAMKYMNKQKC-VEKGSVRNVLNERRILQELNHPFLVNLWYSFQDE----ENMYLVVDLLLGGD 86 (258)
T ss_pred EccCCcEEEEEEEehhhh-cchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCC----CeEEEEEeCCCCCC
Confidence 346789999999986421 2224567889999999999999999999998776 48999999999875
No 124
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.37 E-value=5.8e-12 Score=71.67 Aligned_cols=67 Identities=22% Similarity=0.430 Sum_probs=53.4
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..+|..||+|.+.... ......+.+.+|+++++.++||||+++++.+.... ...+|++|||+++|+
T Consensus 21 ~~~~~~~~~~k~~~~~~--~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~~~~~~e~~~~~~ 87 (265)
T cd08217 21 RKSDGKILVWKEIDYGN--MTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRS--NQTLYIVMEYCEGGD 87 (265)
T ss_pred ecCCCCEEEEEEEeccc--CCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCC--CCEEEEEehhccCCC
Confidence 45678899999997643 23455677889999999999999999999876532 246899999999875
No 125
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=99.37 E-value=2.8e-12 Score=75.69 Aligned_cols=66 Identities=14% Similarity=0.049 Sum_probs=52.0
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcC-CCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..++..||+|.++.... ........+.+|+.+++.+ +||||+++++++.+. ..+|+||||++||+
T Consensus 16 ~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~----~~~~lv~e~~~~~~ 82 (318)
T cd05570 16 LKGTDELYAVKVLKKDVI-LQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTK----DRLFFVMEYVNGGD 82 (318)
T ss_pred ECCCCCEEEEEEEEHHHH-hhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcC----CEEEEEEcCCCCCC
Confidence 356788999999986421 1223455677899999887 799999999999876 48999999999985
No 126
>KOG4717|consensus
Probab=99.37 E-value=2.2e-12 Score=81.11 Aligned_cols=64 Identities=14% Similarity=0.151 Sum_probs=53.5
Q ss_pred cccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 3 ~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
.-||..||+|+|.+.. .+......+.+|+..|+.++|||||+||++..+. ..+|||+|+-++|+
T Consensus 40 VFTGekVAVKviDKTK--lD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQ----TKlyLiLELGD~GD 103 (864)
T KOG4717|consen 40 VFTGEKVAVKVIDKTK--LDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQ----TKLYLILELGDGGD 103 (864)
T ss_pred hcccceeEEEEecccc--cchhhhhHHHHHHHHHHHhcCcCeeeeeehhccc----ceEEEEEEecCCch
Confidence 3589999999998752 3344556788999999999999999999998665 58999999999885
No 127
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=99.36 E-value=3.9e-12 Score=75.20 Aligned_cols=66 Identities=15% Similarity=0.163 Sum_probs=49.7
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHH-HHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFE-NLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~-~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..+|..||+|.+..... ........+.+|.. +++.++||||+++++++... ..+|+||||++||+
T Consensus 16 ~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~----~~~~lv~e~~~~~~ 82 (325)
T cd05604 16 RKLDGKCYAVKVLQKKIV-LNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTT----EKLYFVLDFVNGGE 82 (325)
T ss_pred ECCCCCEEEEEEEEHHHh-hhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecC----CEEEEEEcCCCCCC
Confidence 456789999999976421 12233445566665 57789999999999999876 48999999999985
No 128
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.36 E-value=5.4e-12 Score=73.85 Aligned_cols=65 Identities=15% Similarity=0.140 Sum_probs=52.5
Q ss_pred cccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 3 ~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
..++..||+|.+..... ........+.+|+.+++.++||||+++++.+... ..+|+||||++||+
T Consensus 23 ~~~~~~v~ik~~~~~~~-~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~----~~~~lv~e~~~g~~ 87 (305)
T cd05609 23 KETRQRFAMKKINKQNL-ILRNQIQQVFVERDILTFAENPFVVSMFCSFETK----RHLCMVMEYVEGGD 87 (305)
T ss_pred CCCCcEEEEEEeehhhh-hhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecC----CEEEEEEecCCCCc
Confidence 45778999999876421 1233456788999999999999999999998776 47999999999885
No 129
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.36 E-value=4.7e-12 Score=72.41 Aligned_cols=65 Identities=25% Similarity=0.176 Sum_probs=52.9
Q ss_pred cccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 3 ~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
..+|..||+|.+..... ......+.+.+|+.+++.++||||+++++.+.+. ..+|++|||+++|+
T Consensus 15 ~~~~~~~~iK~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----~~~~lv~e~~~~~~ 79 (262)
T cd05572 15 KSKNRTFALKCVKKRHI-VETGQQEHIFSEKEILEECNHPFIVKLYRTFKDK----KYIYMLMEYCLGGE 79 (262)
T ss_pred CCCCcEEEEEEEehhcc-hhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcC----CccEEEEecCCCCc
Confidence 45688999999976432 1224457789999999999999999999998876 47999999999875
No 130
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=99.36 E-value=7.7e-12 Score=71.81 Aligned_cols=63 Identities=14% Similarity=0.104 Sum_probs=52.5
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..++..||+|.+... .....+.+.+|+.+++.++||||+++++++.+. ..+++++||+++|+
T Consensus 29 ~~~~~~~v~~k~~~~~----~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~----~~~~lv~e~~~~~~ 91 (268)
T cd06624 29 DLSTQVRIAIKEIPER----DSRYVQPLHEEIALHSYLKHRNIVQYLGSDSEN----GFFKIFMEQVPGGS 91 (268)
T ss_pred ecCCCcEEEEEEecCC----CHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccC----CEEEEEEecCCCCC
Confidence 3557788999988753 234556789999999999999999999998876 48999999999885
No 131
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=99.36 E-value=3.7e-12 Score=75.19 Aligned_cols=66 Identities=12% Similarity=0.031 Sum_probs=51.6
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcC-CCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..+|..||+|.+..... ........+..|..+++.+ +||||+++++++.+. ..+|+|||||++|+
T Consensus 16 ~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~----~~~~lv~E~~~~~~ 82 (321)
T cd05591 16 LKGTDEVYAIKVLKKDVI-LQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTK----DRLFFVMEYVNGGD 82 (321)
T ss_pred ECCCCCEEEEEEEeHHHh-hhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcC----CeEEEEEeCCCCCc
Confidence 346788999999976421 1223455677899998865 899999999999886 48999999999985
No 132
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=99.36 E-value=7.8e-12 Score=72.72 Aligned_cols=66 Identities=6% Similarity=-0.029 Sum_probs=52.5
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..+|+.||+|.+..... ........+.+|+.+++.++||||+.+++.+.+. ..+|+||||+.||+
T Consensus 21 ~~~~~~~~avK~~~~~~~-~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~----~~~~lv~e~~~g~~ 86 (285)
T cd05630 21 VRATGKMYACKKLEKKRI-KKRKGESMALNEKQILEKVNSRFVVSLAYAYETK----DALCLVLTLMNGGD 86 (285)
T ss_pred EcCCCceEEEEEEehhhc-cchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecC----CEEEEEEEecCCCc
Confidence 356788999999875422 1223345677899999999999999999999876 38999999999885
No 133
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=99.36 E-value=2.2e-12 Score=76.19 Aligned_cols=66 Identities=14% Similarity=0.040 Sum_probs=51.4
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcC-CCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
++.+|..||+|.+..... ........+.+|..+++.+ +||||+++++++.+. ..+|+|||||+||+
T Consensus 16 ~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~----~~~~iv~Ey~~~g~ 82 (320)
T cd05590 16 LKESGRLYAVKVLKKDVI-LQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTP----DRLFFVMEFVNGGD 82 (320)
T ss_pred EcCCCCEEEEEEEEHHHH-hhccHHHHHHHHHHHHHhccCCCchhceeeEEEcC----CEEEEEEcCCCCch
Confidence 456788999999975421 1223455677888888876 799999999999876 48999999999985
No 134
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=99.36 E-value=9.2e-12 Score=71.67 Aligned_cols=64 Identities=22% Similarity=0.264 Sum_probs=52.8
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..+|..||+|.+.... .......+.+|+.+++.++||||+++++++.+. ..+|+|+||+++|+
T Consensus 22 ~~~~~~~~~ik~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----~~~~~v~e~~~~~~ 85 (274)
T cd06609 22 DKRTNQVVAIKVIDLEE---AEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKG----SKLWIIMEYCGGGS 85 (274)
T ss_pred ECCCCeEEEEEEeeccc---cchHHHHHHHHHHHHHHcCCCCeeeeeEEEEEC----CeEEEEEEeeCCCc
Confidence 34578899999987642 234456788999999999999999999998876 48999999999875
No 135
>KOG0607|consensus
Probab=99.36 E-value=1.4e-13 Score=82.28 Aligned_cols=63 Identities=16% Similarity=0.183 Sum_probs=54.5
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcC-CCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..||..||+|+|.+. ..-.+.++.||++++.+. .|+||++|+++|+++. .+|||||-|.||+
T Consensus 99 ~i~t~~EYAVKiidKq----~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~----~FYLVfEKm~GGp 162 (463)
T KOG0607|consen 99 SIQTGKEYAVKIIDKQ----PGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDT----RFYLVFEKMRGGP 162 (463)
T ss_pred eeccchhhhhhhhhcC----CchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccc----eEEEEEecccCch
Confidence 3468999999999874 234678899999999998 6999999999999984 8999999999995
No 136
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=99.36 E-value=4.4e-12 Score=72.57 Aligned_cols=67 Identities=13% Similarity=0.275 Sum_probs=53.1
Q ss_pred CcccceEEEEEEEEeccccC--chHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKN--FKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..+|..||+|.+....... .......+.+|+.+++.++||||+++++++.+. ..+++||||+.||+
T Consensus 21 ~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~----~~~~~v~e~~~~~~ 89 (268)
T cd06630 21 DVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCED----SHFNLFVEWMAGGS 89 (268)
T ss_pred EcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccC----CeEEEEEeccCCCc
Confidence 45688999999997532101 112456788999999999999999999999876 48999999999885
No 137
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.36 E-value=8.5e-12 Score=72.18 Aligned_cols=62 Identities=24% Similarity=0.175 Sum_probs=50.7
Q ss_pred ccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 4 EEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 4 ~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
.++..||+|.+... ........+.+|+.+++.++||||+++++++... ...|++|||+++|+
T Consensus 32 ~~~~~~~ik~~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~----~~~~lv~e~~~~~~ 93 (283)
T cd05090 32 DHAQLVAIKTLKDI---NNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQE----QPVCMLFEYLNQGD 93 (283)
T ss_pred CCcceEEEEeccCC---CCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecC----CceEEEEEcCCCCc
Confidence 45678999998743 2334456788999999999999999999998776 37899999999875
No 138
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=99.36 E-value=5.1e-12 Score=74.98 Aligned_cols=66 Identities=11% Similarity=-0.032 Sum_probs=52.4
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
++.++..||+|.+..... ........+.+|+.+++.++||||+++++++.+. +.+|+||||+.||+
T Consensus 22 ~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~----~~~~lv~Ey~~gg~ 87 (331)
T cd05624 22 MKHTERIYAMKILNKWEM-LKRAETACFREERNVLVNGDCQWITTLHYAFQDE----NYLYLVMDYYVGGD 87 (331)
T ss_pred ECCCCCEEEEEEEeHHHH-HhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcC----CEEEEEEeCCCCCc
Confidence 346788999999875321 1223445678899999999999999999999876 48999999999985
No 139
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=99.36 E-value=5.7e-12 Score=72.59 Aligned_cols=62 Identities=23% Similarity=0.230 Sum_probs=51.4
Q ss_pred ccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 4 EEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 4 ~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
.++..||+|.++.. ........+.+|+++|+.++||||+++++++.+. ...|++|||+++|+
T Consensus 33 ~~~~~vaiK~~~~~---~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~----~~~~lv~e~~~~~~ 94 (280)
T cd05049 33 NDKELVAVKTLKET---ASNDARKDFEREAELLTNFQHENIVKFYGVCTEG----DPPIMVFEYMEHGD 94 (280)
T ss_pred CCcceEEEEeeccc---CCHHHHHHHHHHHHHHHhcCCCCchheeeEEecC----CCeEEEEecCCCCC
Confidence 45678999998753 2233567899999999999999999999999876 37999999999885
No 140
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=99.35 E-value=1.2e-11 Score=70.90 Aligned_cols=69 Identities=19% Similarity=0.247 Sum_probs=52.7
Q ss_pred CcccceEEEEEEEEecccc-CchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERK-NFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~-~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..+|..||+|.+...... ........+.+|+.+++.++||||+++++++.+.. ...++++|||+++|+
T Consensus 23 ~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~~~~v~e~~~~~~ 92 (265)
T cd06652 23 DADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPM--ERTLSIFMEHMPGGS 92 (265)
T ss_pred EcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCC--CceEEEEEEecCCCc
Confidence 4567899999998753211 11234567889999999999999999999987642 146899999999885
No 141
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=99.35 E-value=1e-11 Score=71.24 Aligned_cols=61 Identities=16% Similarity=0.208 Sum_probs=48.9
Q ss_pred ccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 4 EEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 4 ~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
.++..||+|.+... ......+.+.+|+.+++.++||||+++++++... ..++||||+++|+
T Consensus 20 ~~~~~vavk~~~~~---~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~-----~~~lv~e~~~~~~ 80 (257)
T cd05115 20 KKQIDVAIKVLKNE---NEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEAE-----ALMLVMEMASGGP 80 (257)
T ss_pred CCceeEEEEEcccc---cChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcCC-----CeEEEEEeCCCCC
Confidence 34567999988653 2334556789999999999999999999987543 6899999999885
No 142
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=99.35 E-value=6.3e-12 Score=71.99 Aligned_cols=65 Identities=20% Similarity=0.284 Sum_probs=52.9
Q ss_pred cccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 3 ~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
..+|..+|+|.+..... ........+.+|+.+++.++||||+++++++.+. ...+++|||+.+|+
T Consensus 24 ~~~~~~~~vK~~~~~~~-~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~----~~~~~v~e~~~~~~ 88 (267)
T cd08229 24 LLDGVPVALKKVQIFDL-MDAKARADCIKEIDLLKQLNHPNVIKYYASFIED----NELNIVLELADAGD 88 (267)
T ss_pred cCCCceEEEEeeeehhh-hhHHHHHHHHHHHHHHHHccCCchhhhhheeEeC----CeEEEEEEecCCCC
Confidence 46788999999876422 2234456788999999999999999999999876 48999999999875
No 143
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.35 E-value=8.7e-12 Score=72.92 Aligned_cols=63 Identities=22% Similarity=0.322 Sum_probs=52.5
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
|..+|..||+|.+.... ......+.+|+.+++.++||||+++++++.+. ..+|+|+||+++|+
T Consensus 40 ~~~~~~~v~iK~~~~~~----~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~----~~~~lv~e~~~~~~ 102 (296)
T cd06655 40 DVATGQEVAIKQINLQK----QPKKELIINEILVMKELKNPNIVNFLDSFLVG----DELFVVMEYLAGGS 102 (296)
T ss_pred EcCCCcEEEEEEEeccc----CchHHHHHHHHHHHHhcCCCceeeeeeeEecC----ceEEEEEEecCCCc
Confidence 45678999999997542 23356788999999999999999999999876 48999999999885
No 144
>KOG0587|consensus
Probab=99.35 E-value=3.6e-12 Score=82.87 Aligned_cols=66 Identities=15% Similarity=0.271 Sum_probs=52.4
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcC-CCcceeeeeeeeeeCC-CCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTH-NDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~-~~~~~~~lv~E~~~~Gs 72 (72)
++.+|+.+|+|++... .+..+.+..|.++|+.+ .|||++.+|++|.-.+ +..+.+|||||||.|||
T Consensus 40 ~~~~~~~aa~kI~~~~-----~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqLWLVMEfC~gGS 107 (953)
T KOG0587|consen 40 HVKTGQLAAIKIMDPT-----EDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQLWLVMEFCGGGS 107 (953)
T ss_pred eeecCceeeeEeecCC-----ccccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeEEEEeeccCCcc
Confidence 4567888999988753 34456678888999877 7999999999987543 23568999999999997
No 145
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=99.35 E-value=5.4e-12 Score=72.79 Aligned_cols=62 Identities=18% Similarity=0.302 Sum_probs=50.6
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEET 70 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~ 70 (72)
+..+|..||+|+++... .......+.+|+.+++.++||||+++++++.+.+ ..++||||+++
T Consensus 21 ~~~~~~~~~iK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~----~~~lv~e~~~~ 82 (284)
T cd07836 21 NRTTGEIVALKEIHLDA---EEGTPSTAIREISLMKELKHENIVRLHDVIHTEN----KLMLVFEYMDK 82 (284)
T ss_pred ECCCCeEEEEEEecccc---cccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCC----cEEEEEecCCc
Confidence 35678999999998652 1233456778999999999999999999998863 78999999985
No 146
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=99.35 E-value=6.7e-12 Score=72.41 Aligned_cols=65 Identities=22% Similarity=0.276 Sum_probs=51.8
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
++.+|..||+|++.... ......+.+.+|+.+++.++||||+++++++.+. ..+++||||+++++
T Consensus 22 ~~~~~~~~~iK~~~~~~--~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~----~~~~~v~e~~~~~~ 86 (286)
T cd07847 22 NRETGQIVAIKKFVESE--DDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRK----RKLHLVFEYCDHTV 86 (286)
T ss_pred ECCCCcEEEEEEEeecc--cCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeC----CEEEEEEeccCccH
Confidence 34578999999987542 1222345678999999999999999999999876 48999999998863
No 147
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.34 E-value=9.6e-12 Score=72.70 Aligned_cols=63 Identities=19% Similarity=0.276 Sum_probs=52.4
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..+|..||+|.+.... ......+.+|+.+++.++||||+++++++... ...|+||||+++|+
T Consensus 40 ~~~~~~~vaiK~~~~~~----~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~----~~~~lv~e~~~~~~ 102 (297)
T cd06656 40 DIATGQEVAIKQMNLQQ----QPKKELIINEILVMRENKNPNIVNYLDSYLVG----DELWVVMEYLAGGS 102 (297)
T ss_pred ECCCCCEEEEEEEecCc----cchHHHHHHHHHHHHhCCCCCEeeEEEEEecC----CEEEEeecccCCCC
Confidence 35678999999997542 23346688999999999999999999999876 48999999999885
No 148
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=99.34 E-value=1e-11 Score=71.94 Aligned_cols=65 Identities=18% Similarity=0.241 Sum_probs=52.0
Q ss_pred cccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 3 ~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
..++..||+|.+.... .......+.+|+++++.++||||+++++++.+.. ...++++|||++||+
T Consensus 30 ~~~~~~va~K~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~~~lv~e~~~g~~ 94 (284)
T cd05079 30 DNTGEQVAVKSLKPES---GGNHIADLKKEIEILRNLYHENIVKYKGICTEDG--GNGIKLIMEFLPSGS 94 (284)
T ss_pred CCccceEEEEEcCccc---cHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCC--CCceEEEEEccCCCC
Confidence 4578899999986531 2344567899999999999999999999987642 246899999999885
No 149
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=99.34 E-value=1.1e-11 Score=70.59 Aligned_cols=62 Identities=23% Similarity=0.271 Sum_probs=52.1
Q ss_pred cccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 3 ~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
..++..+|+|.+.... ......+.+|+.+++.++||||+++++++.+. ..+|++|||+.+|+
T Consensus 25 ~~~~~~~~ik~~~~~~----~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~----~~~~l~~e~~~~~~ 86 (262)
T cd06613 25 IATGELVAIKVIKLEP----GDDFEIIQQEISMLKECRHPNIVAYFGSYLRR----DKLWIVMEYCGGGS 86 (262)
T ss_pred cCCCCEEEEEEEEcCc----hhhHHHHHHHHHHHHhCCCCChhceEEEEEeC----CEEEEEEeCCCCCc
Confidence 4567889999997642 23567889999999999999999999999876 48999999999875
No 150
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=99.34 E-value=7.3e-12 Score=73.89 Aligned_cols=67 Identities=19% Similarity=0.228 Sum_probs=50.4
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCC-CCCeEEEEEEecCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHN-DKPRARFLGEYEET 70 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~-~~~~~~lv~E~~~~ 70 (72)
|..+|..||+|++.... ........+.+|+.+++.++||||+++++++..... ....+|+|||||.+
T Consensus 21 ~~~~~~~vaiK~~~~~~--~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~ 88 (338)
T cd07859 21 DTHTGEKVAIKKINDVF--EHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYVVFELMES 88 (338)
T ss_pred ECCCCCEEEEEEechhh--ccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEEEEEecCCC
Confidence 45688999999987431 122344578899999999999999999999865421 12358999999964
No 151
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=99.34 E-value=7.5e-12 Score=72.57 Aligned_cols=62 Identities=19% Similarity=0.139 Sum_probs=51.0
Q ss_pred ccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 4 EEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 4 ~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
.++..||+|.+... ........+.+|+.+++.++||||+++++++.+.. ..+++|||+++|+
T Consensus 33 ~~~~~~aiK~~~~~---~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~----~~~lv~e~~~~~~ 94 (288)
T cd05050 33 EPFTMVAVKMLKEE---ASADMQADFQREAALMAEFDHPNIVKLLGVCAVGK----PMCLLFEYMAYGD 94 (288)
T ss_pred CcceeEEEEecCCC---cCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCC----ccEEEEecCCCCC
Confidence 46778999998753 23345567889999999999999999999988763 7899999999885
No 152
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=99.34 E-value=1e-11 Score=71.31 Aligned_cols=60 Identities=18% Similarity=0.268 Sum_probs=48.8
Q ss_pred ceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 6 GVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 6 g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..+|+|.++.. ........+.+|+.+++.++||||+++++++.+. ..+|+||||+++|+
T Consensus 32 ~~~~~ik~~~~~---~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----~~~~lv~e~~~~~~ 91 (267)
T cd05066 32 EIPVAIKTLKAG---YTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKS----KPVMIVTEYMENGS 91 (267)
T ss_pred ceEEEEEECCCC---CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecC----CccEEEEEcCCCCC
Confidence 447999988653 2234456789999999999999999999998766 47899999999885
No 153
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.34 E-value=7.7e-12 Score=73.99 Aligned_cols=66 Identities=12% Similarity=0.146 Sum_probs=51.8
Q ss_pred cccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcC-CCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 3 ~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
..+|..||+|.+..............+.+|+.+++.+ +||||+++++++.+. ..+|+|||||++|+
T Consensus 25 ~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~----~~~~lv~e~~~~g~ 91 (332)
T cd05614 25 HDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTE----AKLHLILDYVSGGE 91 (332)
T ss_pred CCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecC----CEEEEEEeCCCCCc
Confidence 4578899999997542211223456678899999999 599999999998876 48999999999985
No 154
>KOG0694|consensus
Probab=99.34 E-value=4.2e-12 Score=80.77 Aligned_cols=65 Identities=11% Similarity=0.077 Sum_probs=55.4
Q ss_pred cccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcC-CCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 3 ~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+.+++.||||.+++... ...+..+....|-.|+... +||.++.++.+|.+.+ .+|+||||+.||+
T Consensus 390 k~~~e~yAIK~LKK~~I-l~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~----~l~fvmey~~Ggd 455 (694)
T KOG0694|consen 390 KGTNEYYAIKVLKKGDI-LQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKE----HLFFVMEYVAGGD 455 (694)
T ss_pred cCCCcEEEEEEeeccce-eccccHHHHHHHHHHHHHhccCCeEeecccccccCC----eEEEEEEecCCCc
Confidence 56788999999998764 3446678888999988876 6999999999999874 8999999999996
No 155
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=99.33 E-value=1.1e-11 Score=71.97 Aligned_cols=65 Identities=6% Similarity=-0.015 Sum_probs=51.8
Q ss_pred cccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 3 ~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
..+|+.||+|.+..... ........+.+|+++|+.++||||+.+++++.+. +.++++|||+.+|+
T Consensus 22 ~~~~~~~aiK~~~~~~~-~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~----~~~~lv~e~~~~~~ 86 (285)
T cd05632 22 RATGKMYACKRLEKKRI-KKRKGESMALNEKQILEKVNSQFVVNLAYAYETK----DALCLVLTIMNGGD 86 (285)
T ss_pred CCCCcEEEEEEeehhhh-hhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecC----CEEEEEEEeccCcc
Confidence 45788999999976421 1223345678899999999999999999998876 48999999999875
No 156
>KOG4257|consensus
Probab=99.33 E-value=2.4e-12 Score=82.20 Aligned_cols=57 Identities=16% Similarity=0.185 Sum_probs=50.3
Q ss_pred eEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCC
Q psy8984 7 VEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETP 71 (72)
Q Consensus 7 ~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~G 71 (72)
.-||||..+.. ..++..+.|++|..+|++++|||||++.|++.+. ..|||||+++-|
T Consensus 419 iaVAvKtCK~d---~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~-----P~WivmEL~~~G 475 (974)
T KOG4257|consen 419 IAVAVKTCKTD---CTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQ-----PMWIVMELAPLG 475 (974)
T ss_pred eeeeeehhccC---CChhhHHHHHHHHHHHHhCCCcchhheeeeeecc-----ceeEEEecccch
Confidence 46999998875 3556789999999999999999999999999886 599999999877
No 157
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=99.33 E-value=1.6e-11 Score=71.39 Aligned_cols=62 Identities=18% Similarity=0.135 Sum_probs=52.4
Q ss_pred cccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 3 ~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
..+|..||+|.+... .......+.+|+.+++.++||||+++++++... ..+|+||||+++|+
T Consensus 34 ~~~~~~~~~k~~~~~----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----~~~~lv~e~~~~~~ 95 (292)
T cd06644 34 KETGALAAAKVIETK----SEEELEDYMVEIEILATCNHPYIVKLLGAFYWD----GKLWIMIEFCPGGA 95 (292)
T ss_pred CCCCceEEEEEeccC----CHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeC----CeEEEEEecCCCCc
Confidence 457889999998753 345567788999999999999999999998876 48999999999885
No 158
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=99.33 E-value=9.6e-12 Score=73.70 Aligned_cols=66 Identities=15% Similarity=0.088 Sum_probs=52.5
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcC-CCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..++..||+|.++.... ........+.+|+.++.++ +||||+++++++.+. ..+|+|||||+||+
T Consensus 16 ~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~----~~~~lv~e~~~~~~ 82 (327)
T cd05617 16 LKKNDQIYAMKVVKKELV-HDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTT----SRLFLVIEYVNGGD 82 (327)
T ss_pred ECCCCCEEEEEEEEHHHh-hhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeC----CEEEEEEeCCCCCc
Confidence 346788999999986421 1223456688999999888 799999999999876 48999999999985
No 159
>KOG4278|consensus
Probab=99.33 E-value=5.9e-13 Score=85.16 Aligned_cols=56 Identities=14% Similarity=0.155 Sum_probs=48.6
Q ss_pred EEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 8 EVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 8 ~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
.||+|.++- +....+.|+.|..+|+.++|||+|+|+++|..+. .+|||+|||..|+
T Consensus 294 TvAVKtLKE-----DtMeveEFLkEAAvMKeikHpNLVqLLGVCT~Ep----PFYIiTEfM~yGN 349 (1157)
T KOG4278|consen 294 TVAVKTLKE-----DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEP----PFYIITEFMCYGN 349 (1157)
T ss_pred eeehhhhhh-----cchhHHHHHHHHHHHHhhcCccHHHHhhhhccCC----CeEEEEecccCcc
Confidence 578887764 3456788999999999999999999999998874 7999999999986
No 160
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=99.33 E-value=6.9e-12 Score=74.13 Aligned_cols=66 Identities=18% Similarity=0.146 Sum_probs=48.1
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHH-HHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVF-ENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei-~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..++..||+|.+..... ........+.+|. .+++.++||||+++++++.+. ..+|+||||++||+
T Consensus 16 ~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~----~~~~lv~e~~~~~~ 82 (325)
T cd05602 16 HKAEEKFYAVKVLQKKAI-LKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTA----DKLYFVLDYINGGE 82 (325)
T ss_pred ECCCCCEEEEEEEEHHHH-HhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcC----CeEEEEEeCCCCCc
Confidence 456788999999975421 1112233444554 457889999999999999876 48999999999985
No 161
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=99.33 E-value=1.1e-11 Score=70.40 Aligned_cols=65 Identities=18% Similarity=0.266 Sum_probs=53.4
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..++..+|+|.+..... .......+.+|+.+++.++||||+++++.+... ..+++||||+++|+
T Consensus 21 ~~~~~~~~~ik~~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~----~~~~lv~e~~~~~~ 85 (256)
T cd08220 21 RKADQKLVIIKQIPVEQM--TKDERLAAQNECQVLKLLSHPNIIEYYENFLED----KALMIVMEYAPGGT 85 (256)
T ss_pred EcCCCcEEEEEEEecccc--ccHHHHHHHHHHHHHhhCCCCchhheeeeEecC----CEEEEEEecCCCCC
Confidence 345788999999986432 334567789999999999999999999998765 48999999999875
No 162
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.33 E-value=1.5e-11 Score=71.92 Aligned_cols=63 Identities=19% Similarity=0.276 Sum_probs=52.3
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..+|..||+|.+.... ......+.+|+.+++.++||||+++++.+.+. ...|+||||++||+
T Consensus 41 ~~~~~~~v~ik~~~~~~----~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~----~~~~lv~e~~~~~~ 103 (296)
T cd06654 41 DVATGQEVAIRQMNLQQ----QPKKELIINEILVMRENKNPNIVNYLDSYLVG----DELWVVMEYLAGGS 103 (296)
T ss_pred ECCCCcEEEEEEEecCC----cchHHHHHHHHHHHHhCCCCCEeeEEEEEEeC----CEEEEeecccCCCC
Confidence 35678899999997642 22346688999999999999999999999876 48999999999985
No 163
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=99.33 E-value=9.1e-12 Score=71.89 Aligned_cols=63 Identities=17% Similarity=0.274 Sum_probs=50.7
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEET 70 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~ 70 (72)
+..+|..||+|.++... ........+.+|+.+++.++||||+++++++.++ ..+|+||||+.+
T Consensus 21 ~~~~~~~~~ik~~~~~~--~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----~~~~~v~e~~~~ 83 (285)
T cd07861 21 NKKTGQIVAMKKIRLES--EEEGVPSTAIREISLLKELQHPNIVCLQDVLMQE----SRLYLIFEFLSM 83 (285)
T ss_pred ECCCCcEEEEEEecccc--ccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeC----CeEEEEEecCCC
Confidence 34678899999987642 1223345678899999999999999999999876 489999999974
No 164
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=99.32 E-value=1.7e-11 Score=71.45 Aligned_cols=61 Identities=16% Similarity=0.231 Sum_probs=50.3
Q ss_pred cceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 5 EGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 5 ~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
++..||+|.+... ........+.+|+.+|+.++||||+++++++.+.+ ..+++|||+++|+
T Consensus 45 ~~~~~a~K~~~~~---~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~----~~~lv~e~~~~~~ 105 (296)
T cd05095 45 QPVLVAVKMLRED---ANKNARNDFLKEIKIMSRLKDPNIIRLLAVCITSD----PLCMITEYMENGD 105 (296)
T ss_pred ceeEEEEEecccc---CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCC----ccEEEEEeCCCCc
Confidence 4557999998753 23445678899999999999999999999998763 7899999999885
No 165
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=99.32 E-value=1.8e-11 Score=70.68 Aligned_cols=61 Identities=7% Similarity=0.007 Sum_probs=49.3
Q ss_pred cceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 5 EGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 5 ~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
++..||+|.+... ........+.+|+.+++.++||||+++++++.+. ...++||||+++|+
T Consensus 35 ~~~~~aik~~~~~---~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~----~~~~lv~e~~~~~~ 95 (277)
T cd05062 35 PETRVAIKTVNEA---ASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQG----QPTLVIMELMTRGD 95 (277)
T ss_pred ceeEEEEEecccc---CCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC----CCeEEEEecCCCCC
Confidence 4678999988643 1233456788999999999999999999998765 47899999999885
No 166
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=99.32 E-value=7.9e-12 Score=73.82 Aligned_cols=66 Identities=12% Similarity=0.013 Sum_probs=50.4
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhc-CCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQ-LEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~-l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..+|..||+|.++.... ..........+|..+++. ++||||+++++++.+. ..+|+||||++||+
T Consensus 16 ~~~~~~~vaiK~~~~~~~-~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~----~~~~lv~ey~~~g~ 82 (316)
T cd05619 16 LKGTNQFFAIKALKKDVV-LMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTK----ENLFFVMEYLNGGD 82 (316)
T ss_pred ECCCCCEEEEEEEEHHHh-hhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeC----CEEEEEEeCCCCCc
Confidence 356788999999986421 112334556778888876 5999999999999876 48999999999985
No 167
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=99.32 E-value=1.4e-11 Score=72.23 Aligned_cols=62 Identities=16% Similarity=0.158 Sum_probs=50.4
Q ss_pred ccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcC-CCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 4 EEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 4 ~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
.++..||+|.++.. ......+.+.+|+.+++++ +||||+++++++... ..+|++|||+.+|+
T Consensus 63 ~~~~~vavK~~~~~---~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~----~~~~lv~e~~~~~~ 125 (302)
T cd05055 63 DAVMKVAVKMLKPT---AHSSEREALMSELKIMSHLGNHENIVNLLGACTIG----GPILVITEYCCYGD 125 (302)
T ss_pred CceeEEEEEecCcc---CChHHHHHHHHHHHHHHhccCCCCcceEEEEEecC----CceEEEEEcCCCCc
Confidence 34668999988653 1234556789999999999 899999999998776 37899999999885
No 168
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=99.32 E-value=8.7e-12 Score=72.80 Aligned_cols=62 Identities=18% Similarity=0.195 Sum_probs=50.0
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEET 70 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~ 70 (72)
+..++..||+|.++... .......+.+|+.+++.++||||+++++++.+. ..+|+||||+.+
T Consensus 27 ~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~----~~~~lv~e~~~~ 88 (301)
T cd07873 27 SKLTDNLVALKEIRLEH---EEGAPCTAIREVSLLKDLKHANIVTLHDIIHTE----KSLTLVFEYLDK 88 (301)
T ss_pred EcCCCcEEEEEEEeccc---ccCchhHHHHHHHHHHhcCCCCcceEEEEEecC----CeEEEEEecccc
Confidence 45678899999997642 122344577899999999999999999999876 489999999974
No 169
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=99.32 E-value=1.2e-11 Score=71.99 Aligned_cols=59 Identities=17% Similarity=0.241 Sum_probs=48.9
Q ss_pred eEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 7 VEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 7 ~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
..||+|.++.. ........+.+|+++++.++||||+++++++... ..+++||||+.+|+
T Consensus 45 ~~vavK~~~~~---~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~----~~~~lv~e~~~~~~ 103 (295)
T cd05097 45 VLVAVKMLRAD---VTKTARNDFLKEIKIMSRLKNPNIIRLLGVCVSD----DPLCMITEYMENGD 103 (295)
T ss_pred eEEEEEecCCC---CCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEcCC----CccEEEEecCCCCc
Confidence 45899998653 2344566789999999999999999999999776 37899999999875
No 170
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.32 E-value=1.3e-11 Score=72.31 Aligned_cols=64 Identities=19% Similarity=0.274 Sum_probs=51.4
Q ss_pred cccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCC
Q psy8984 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETP 71 (72)
Q Consensus 3 ~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~G 71 (72)
..+|..||+|++..... ........+.+|+.+++.++||||+++++++.+. ...|+||||+.|+
T Consensus 37 ~~~~~~v~iK~~~~~~~-~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~----~~~~lv~e~~~g~ 100 (307)
T cd06607 37 VRTNEVVAIKKMSYSGK-QSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLRE----HTAWLVMEYCLGS 100 (307)
T ss_pred cCCCcEEEEEEEecccc-CcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeC----CeEEEEHHhhCCC
Confidence 45788999999875422 2334456788999999999999999999999886 3789999999753
No 171
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.32 E-value=4.8e-12 Score=71.96 Aligned_cols=65 Identities=20% Similarity=0.315 Sum_probs=52.3
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
++.+|..+|+|.+..... .......+.+|+.+++.++||||+++++.+.+. ...|+|+||+++++
T Consensus 21 ~~~~~~~~~ik~~~~~~~--~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~----~~~~lv~e~~~~~~ 85 (257)
T cd08225 21 AKSDSEHCVIKEIDLTKM--PVKEKEASKKEVILLAKMKHPNIVTFFASFQEN----GRLFIVMEYCDGGD 85 (257)
T ss_pred EcCCCceEEEEEeeHhhc--cchhhHHHHHHHHHHHhCCCCChhhhhheeccC----CeEEEEEecCCCCc
Confidence 345788899999976421 223456778999999999999999999998776 48999999999875
No 172
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=99.31 E-value=1.4e-11 Score=69.97 Aligned_cols=61 Identities=20% Similarity=0.112 Sum_probs=49.6
Q ss_pred cceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 5 EGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 5 ~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
++..+|+|.+... ........+.+|+.+++.++||||+++++++... ...++||||+++|+
T Consensus 18 ~~~~~a~K~~~~~---~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----~~~~lv~e~~~~~~ 78 (250)
T cd05085 18 DKTPVAVKTCKED---LPQELKIKFLSEARILKQYDHPNIVKLIGVCTQR----QPIYIVMELVPGGD 78 (250)
T ss_pred CCcEEEEEecCCc---CCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecC----CccEEEEECCCCCc
Confidence 4678999987643 2234455788999999999999999999998776 37899999999885
No 173
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=99.31 E-value=1.2e-11 Score=70.71 Aligned_cols=64 Identities=16% Similarity=0.207 Sum_probs=53.2
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..++..+|+|.+... ........+.+|+++++.++||||+++++++.+. ..+++++||+.+++
T Consensus 22 ~~~~~~~~~ik~~~~~---~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~----~~~~lv~e~~~~~~ 85 (265)
T cd06605 22 HRPTGKIMAVKTIRLE---INEAIQKQILRELDILHKCNSPYIVGFYGAFYNN----GDISICMEYMDGGS 85 (265)
T ss_pred EcCCCcEEEEEEEecc---cChHHHHHHHHHHHHHHHCCCCchhhhheeeecC----CEEEEEEEecCCCc
Confidence 3457889999998764 2235567789999999999999999999999876 48999999999774
No 174
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=99.31 E-value=1.8e-11 Score=69.69 Aligned_cols=66 Identities=20% Similarity=0.346 Sum_probs=52.1
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..+|..||+|++.... ........+.+|+++++.++||||+++++.+...+ ..+|++|||+++|+
T Consensus 21 ~~~~~~~~~~k~~~~~~--~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~---~~~~lv~e~~~~~~ 86 (257)
T cd08223 21 HRTDGKQYVIKKLNLRN--ASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGED---GLLYIVMGFCEGGD 86 (257)
T ss_pred EcCCCcEEEEEEEehhh--cCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCC---CEEEEEecccCCCc
Confidence 34568899999997642 22345567889999999999999999999876543 46899999999875
No 175
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=99.31 E-value=1.8e-11 Score=70.30 Aligned_cols=59 Identities=17% Similarity=0.239 Sum_probs=48.9
Q ss_pred eEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 7 VEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 7 ~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
..||+|.+... ........+.+|+.+++.++||||+++++++.+. ...++||||+++|+
T Consensus 33 ~~vaiK~~~~~---~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~----~~~~lv~e~~~~~~ 91 (269)
T cd05065 33 IFVAIKTLKSG---YTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKS----RPVMIITEFMENGA 91 (269)
T ss_pred eeEEEEEcCCC---CCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCC----CceEEEEecCCCCc
Confidence 46999988653 2344567899999999999999999999998776 37899999999875
No 176
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=99.31 E-value=2e-11 Score=70.13 Aligned_cols=60 Identities=17% Similarity=0.161 Sum_probs=47.7
Q ss_pred ceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 6 GVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 6 g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
...+|+|.+... ........+.+|+.+++.++||||+++++.+.+. ..+|+||||+++|+
T Consensus 22 ~~~~~~k~~~~~---~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~----~~~~lv~e~~~~g~ 81 (269)
T cd05042 22 KARVVVKELRAS---ATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIES----IPYLLVLEFCPLGD 81 (269)
T ss_pred CeEEEEeecCcc---CChHHHHHHHHHHHHHHhCCCCCcceEEEEECCC----CceEEEEEeCCCCc
Confidence 456788876543 2234456788999999999999999999998776 37999999999986
No 177
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.31 E-value=2.7e-11 Score=69.03 Aligned_cols=63 Identities=13% Similarity=0.174 Sum_probs=53.0
Q ss_pred cccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 3 ~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
..+|..||+|++.... .......+.+|+..++.++||||+++++++... ..+|++|||+++|+
T Consensus 23 ~~~~~~~~vk~~~~~~---~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~----~~~~lv~e~~~~~~ 85 (264)
T cd06623 23 KPTGKIYALKKIHVDG---DEEFRKQLLRELKTLRSCESPYVVKCYGAFYKE----GEISIVLEYMDGGS 85 (264)
T ss_pred cCCCcEEEEEEeccCc---chHHHHHHHHHHHHHHhcCCCCeeeEEEEEccC----CeEEEEEEecCCCc
Confidence 4578999999987652 224567789999999999999999999999876 48999999999875
No 178
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=99.31 E-value=3.1e-11 Score=69.82 Aligned_cols=62 Identities=21% Similarity=0.198 Sum_probs=51.6
Q ss_pred cccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 3 ~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
..++..+|+|.+... .......+.+|+++++.++||||+++++++... ...|+||||+++|+
T Consensus 27 ~~~~~~~~~k~~~~~----~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~----~~~~~v~e~~~~~~ 88 (282)
T cd06643 27 KETGVLAAAKVIDTK----SEEELEDYMVEIDILASCDHPNIVKLLDAFYYE----NNLWILIEFCAGGA 88 (282)
T ss_pred CCCCeEEEEEEeCCC----CHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeC----CEEEEEEEecCCCc
Confidence 456888999988653 234566788999999999999999999999876 48999999999875
No 179
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.31 E-value=3.4e-11 Score=69.07 Aligned_cols=69 Identities=19% Similarity=0.323 Sum_probs=52.8
Q ss_pred CcccceEEEEEEEEeccc-cCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSER-KNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~-~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..+|..||+|.+..... .........+.+|+.+++.++||||+++++++.+.. ...++++|||+++|+
T Consensus 23 ~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~--~~~~~~v~e~~~~~~ 92 (264)
T cd06653 23 DADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPE--EKKLSIFVEYMPGGS 92 (264)
T ss_pred EcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCC--CCEEEEEEEeCCCCc
Confidence 456789999999865321 112334567889999999999999999999987642 246899999999875
No 180
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=99.30 E-value=1.3e-11 Score=72.34 Aligned_cols=62 Identities=18% Similarity=0.187 Sum_probs=49.8
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEET 70 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~ 70 (72)
+..++..||+|.++... .......+.+|+.+++.++||||+++++++.+. ...|+||||+.+
T Consensus 27 ~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----~~~~lv~e~~~~ 88 (309)
T cd07872 27 SKLTENLVALKEIRLEH---EEGAPCTAIREVSLLKDLKHANIVTLHDIVHTD----KSLTLVFEYLDK 88 (309)
T ss_pred ecCCCCeEEEEEeeccc---cCCcchhHHHHHHHHHhCCCCCcceEEEEEeeC----CeEEEEEeCCCC
Confidence 45678899999997642 122334577899999999999999999999876 379999999975
No 181
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=99.30 E-value=1.3e-11 Score=72.89 Aligned_cols=66 Identities=12% Similarity=-0.009 Sum_probs=49.5
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhc-CCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQ-LEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~-l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..+|..||+|.++.... ..........+|..++.. .+||||+++++++.+. ..+|+||||++||+
T Consensus 16 ~~~~~~~vaiK~~~~~~~-~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~----~~~~lv~e~~~gg~ 82 (316)
T cd05592 16 LKGTNEFFAIKALKKDVV-LEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTK----EHLFFVMEYLNGGD 82 (316)
T ss_pred ECCCCCEEEEEEEEHHHh-hhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcC----CEEEEEEcCCCCCc
Confidence 346788999999986421 122334556677777765 4899999999999876 48999999999985
No 182
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=99.30 E-value=1.3e-11 Score=71.63 Aligned_cols=62 Identities=21% Similarity=0.230 Sum_probs=49.2
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEET 70 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~ 70 (72)
++.+|..||+|.+.... .......+.+|+++++.++||||+++++++.+. ...|+||||+.+
T Consensus 26 ~~~~~~~~~iK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~----~~~~lv~e~~~~ 87 (291)
T cd07844 26 SKLTGQLVALKEIRLEH---EEGAPFTAIREASLLKDLKHANIVTLHDIIHTK----KTLTLVFEYLDT 87 (291)
T ss_pred EcCCCcEEEEEEEeccc---ccCCchhHHHHHHHHhhCCCcceeeEEEEEecC----CeEEEEEecCCC
Confidence 34578899999997642 112234567899999999999999999999876 489999999974
No 183
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=99.30 E-value=2.4e-11 Score=69.48 Aligned_cols=63 Identities=16% Similarity=0.142 Sum_probs=51.0
Q ss_pred cccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 3 ~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
..++..+|+|.++... ......+.+.+|+.+++.++||||+++++++... ..++||||+++|+
T Consensus 19 ~~~~~~~aiK~~~~~~--~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~lv~e~~~~~~ 81 (257)
T cd05116 19 KKSEKTVAVKILKNDN--NDPALKDELLREANVMQQLDNPYIVRMIGICEAE-----SWMLVMELAELGP 81 (257)
T ss_pred CCCceEEEEEEccCCC--CcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-----CcEEEEecCCCCc
Confidence 3567899999987542 2344567889999999999999999999987543 5789999999885
No 184
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.30 E-value=2.5e-11 Score=78.00 Aligned_cols=66 Identities=14% Similarity=0.044 Sum_probs=53.8
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..+|..||+|+++.... ........+.+|+.+++.++||||+++++++... ..+||||||+.||+
T Consensus 25 ~~~~~~~vAiKvi~~~~~-~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~----~~~~lVmEy~~g~~ 90 (669)
T cd05610 25 KKNNSKLYAVKVVKKADM-INKNMVHQVQAERDALALSKSPFIVHLYYSLQSA----NNVYLVMEYLIGGD 90 (669)
T ss_pred ECCCCcEEEEEEEehhhc-cCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEEC----CEEEEEEeCCCCCC
Confidence 345788999999976432 2344567789999999999999999999998876 48999999999875
No 185
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=99.30 E-value=2.4e-11 Score=70.00 Aligned_cols=64 Identities=25% Similarity=0.340 Sum_probs=51.7
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCC---CcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLE---HPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~---HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..+|..||+|.++... .......+.+|+.+++.++ ||||+++++++.+. ...|++|||+++|+
T Consensus 22 ~~~~~~~~~iK~~~~~~---~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~----~~~~lv~e~~~~~~ 88 (277)
T cd06917 22 HVPTGRVVALKIINLDT---PDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKG----PRLWIIMEYAEGGS 88 (277)
T ss_pred EcCCCcEEEEEEecCCC---CchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeC----CEEEEEEecCCCCc
Confidence 34678899999987542 2344567889999999886 99999999998876 47999999999875
No 186
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.29 E-value=1.5e-11 Score=71.53 Aligned_cols=63 Identities=14% Similarity=0.229 Sum_probs=50.4
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEET 70 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~ 70 (72)
++.+|+.||+|.+.... ........+.+|+++++.++||||+++++++.+. ...|+||||+++
T Consensus 23 ~~~~~~~~~iK~~~~~~--~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----~~~~lv~e~~~~ 85 (294)
T PLN00009 23 DRVTNETIALKKIRLEQ--EDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSE----KRLYLVFEYLDL 85 (294)
T ss_pred ecCCCcEEEEEehhhcc--ccccchHHHHHHHHHHHhccCCCEeeEEEEEecC----CeEEEEEecccc
Confidence 35678899999987542 1223445678899999999999999999999876 489999999964
No 187
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=99.29 E-value=1e-11 Score=72.63 Aligned_cols=63 Identities=13% Similarity=0.207 Sum_probs=51.8
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..+|..||+|.+.... ......+.+|+.+++.++||||+++++++... ...|++|||+++|+
T Consensus 42 ~~~~~~~v~iK~~~~~~----~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~----~~~~iv~e~~~~~~ 104 (297)
T cd06659 42 EKHSGRQVAVKMMDLRK----QQRRELLFNEVVIMRDYQHQNVVEMYKSYLVG----EELWVLMEFLQGGA 104 (297)
T ss_pred EcCCCCEEEEEEEEecc----cchHHHHHHHHHHHHhCCCCchhhhhhheeeC----CeEEEEEecCCCCC
Confidence 34578899999997642 23346688999999999999999999999876 48999999999875
No 188
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=99.29 E-value=3.9e-11 Score=68.71 Aligned_cols=67 Identities=16% Similarity=0.241 Sum_probs=51.5
Q ss_pred CcccceEEEEEEEEeccccCc-----hHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNF-----KAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~-----~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..++..||+|.+........ ......+.+|+.+++.++||||+++++++.+. ...+++|||+++|+
T Consensus 21 ~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----~~~~lv~e~~~~~~ 92 (267)
T cd06628 21 NASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDA----DHLNIFLEYVPGGS 92 (267)
T ss_pred ecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeC----CccEEEEEecCCCC
Confidence 345678999998875421111 12235688999999999999999999998876 37899999999875
No 189
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=99.29 E-value=3.3e-11 Score=69.03 Aligned_cols=65 Identities=20% Similarity=0.293 Sum_probs=51.1
Q ss_pred ccceEEEEEEEEecccc--CchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 4 EEGVEVVWNEVQFSERK--NFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 4 ~~g~~vAiK~i~~~~~~--~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
.+|..+|+|.+...... ........+.+|+++++.++||||+++++++.+. ..+|++|||+++|+
T Consensus 22 ~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~----~~~~lv~e~~~~~~ 88 (265)
T cd06631 22 NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDD----NTISIFMEFVPGGS 88 (265)
T ss_pred cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecC----CeEEEEEecCCCCc
Confidence 36778999998754210 1122345688999999999999999999999876 48999999999885
No 190
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=99.29 E-value=2e-11 Score=70.18 Aligned_cols=67 Identities=19% Similarity=0.267 Sum_probs=51.4
Q ss_pred CcccceEEEEEEEEeccccC------chHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKN------FKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~------~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..+|..||+|.++...... .....+.+.+|+.+++.++||||+++++++.+. ..+++||||+++|+
T Consensus 22 ~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----~~~~lv~e~~~~~~ 94 (272)
T cd06629 22 NVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTE----EYLSIFLEYVPGGS 94 (272)
T ss_pred ecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccC----CceEEEEecCCCCc
Confidence 34678899999987531100 111235678899999999999999999998776 48999999999885
No 191
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=99.29 E-value=2.1e-11 Score=72.32 Aligned_cols=65 Identities=11% Similarity=0.035 Sum_probs=51.5
Q ss_pred cccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 3 ~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+.++..||+|.+..... ........+.+|+.++..++||||+++++++.+. ..+|+||||+.+|+
T Consensus 23 ~~~~~~~aiK~~~~~~~-~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~----~~~~lv~ey~~~g~ 87 (332)
T cd05623 23 KNADKVFAMKILNKWEM-LKRAETACFREERDVLVNGDNQWITTLHYAFQDE----NNLYLVMDYYVGGD 87 (332)
T ss_pred CCCCCEEEEEEEeHHHH-HHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecC----CEEEEEEeccCCCc
Confidence 45678899999875321 1223345578899999999999999999999876 48999999999985
No 192
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=99.29 E-value=2.7e-11 Score=71.10 Aligned_cols=65 Identities=12% Similarity=0.114 Sum_probs=52.7
Q ss_pred cccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 3 ~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
..+|..||+|.+..... ........+.+|+++++.++||||+++++.+.+. ...|+||||+.||+
T Consensus 23 ~~~~~~~aiK~~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~----~~~~lv~e~~~~~~ 87 (316)
T cd05574 23 KGTGKLFALKVLDKKEM-IKRNKVKRVLTEQEILATLDHPFLPTLYASFQTE----TYLCLVMDYCPGGE 87 (316)
T ss_pred cCCCcEEEEEEEecccc-chHHHHHHHHHHHHHHHhCCCCCchhheeeeecC----CEEEEEEEecCCCC
Confidence 34688999999986532 1123556788999999999999999999998776 48999999999875
No 193
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=99.29 E-value=1.3e-11 Score=72.80 Aligned_cols=66 Identities=11% Similarity=0.007 Sum_probs=50.6
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhc-CCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQ-LEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~-l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
++.+|..||+|.++.... ..........+|..++.. ++||||+++++++.+. ..+|+|||||.||+
T Consensus 16 ~~~~~~~~avK~~~~~~~-~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~----~~~~lv~E~~~~g~ 82 (316)
T cd05620 16 LKGKGEYFAVKALKKDVV-LIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTK----EHLFFVMEFLNGGD 82 (316)
T ss_pred ECCCCCEEEEEEEEHHHh-hhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeC----CEEEEEECCCCCCc
Confidence 456788999999986421 112334566778888875 4999999999999876 48999999999985
No 194
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=99.29 E-value=1.7e-11 Score=69.96 Aligned_cols=59 Identities=17% Similarity=0.255 Sum_probs=47.6
Q ss_pred cceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 5 EGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 5 ~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
++..+|+|.+.... .....+.+|+.+|+.++||||+++++++.+. ..++++|||+++|+
T Consensus 27 ~~~~~a~K~~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----~~~~iv~e~~~~~~ 85 (256)
T cd05114 27 AQIKVAIKAINEGA-----MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQ----KPLYIVTEFMENGC 85 (256)
T ss_pred cCceEEEEecccCC-----ccHHHHHHHHHHHHHCCCCCceeEEEEEccC----CCEEEEEEcCCCCc
Confidence 34578999876431 2235688899999999999999999998776 37899999999885
No 195
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=99.29 E-value=3.2e-11 Score=70.08 Aligned_cols=61 Identities=8% Similarity=-0.020 Sum_probs=48.8
Q ss_pred cceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 5 EGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 5 ~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
.+..||+|.+... ........+.+|+.+++.++||||+++++++.+. ...|+||||+++|+
T Consensus 35 ~~~~vavK~~~~~---~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~----~~~~lv~e~~~~g~ 95 (288)
T cd05061 35 AETRVAVKTVNES---ASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKG----QPTLVVMELMAHGD 95 (288)
T ss_pred cceEEEEEECCCc---CCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC----CCcEEEEeCCCCCC
Confidence 3568999987643 2233445678899999999999999999998776 37899999999886
No 196
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=99.28 E-value=2.6e-11 Score=69.95 Aligned_cols=63 Identities=17% Similarity=0.231 Sum_probs=51.8
Q ss_pred cccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 3 ~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
..+|..||+|++..... .......+.+|+.+++.++||||+++++++.+. ..+|+||||+ +|+
T Consensus 22 ~~~~~~~~vK~~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~----~~~~~v~e~~-~~~ 84 (286)
T cd07832 22 RETGETVALKKVALRRL--EGGIPNQALREIKALQACQHPYVVKLLDVFPHG----SGFVLVMEYM-PSD 84 (286)
T ss_pred CCCCceEEEEEEEcccc--cchhhHHHHHHHHHHHhCCCCCCcceeeEEecC----CeeEEEeccc-CCC
Confidence 45788999999986531 234456789999999999999999999999876 4899999999 764
No 197
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=99.28 E-value=4.1e-12 Score=73.37 Aligned_cols=64 Identities=22% Similarity=0.236 Sum_probs=51.4
Q ss_pred cccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 3 ~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
..+|..||+|.+.... ........+.+|+++++.++||||+++++++.+. ...|+||||+++++
T Consensus 23 ~~~~~~~~iK~~~~~~--~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----~~~~lv~e~~~~~~ 86 (286)
T cd07846 23 KETGQIVAIKKFLESE--DDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRK----KRLYLVFEFVDHTV 86 (286)
T ss_pred CCCCCEEEEEeHhhcc--CcchhhHHHHHHHHHHHhcCCcchhhHHHhcccC----CeEEEEEecCCccH
Confidence 4568899999886542 1223456788999999999999999999999876 48999999998763
No 198
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.28 E-value=2.5e-11 Score=70.93 Aligned_cols=62 Identities=13% Similarity=0.148 Sum_probs=51.9
Q ss_pred cccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 3 ~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
..+|..||+|++... .......+.+|+.+++.++||||+++++.+... ...|++|||+++|+
T Consensus 42 ~~~~~~v~iK~~~~~----~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~----~~~~lv~e~~~~~~ 103 (292)
T cd06657 42 KSSGKLVAVKKMDLR----KQQRRELLFNEVVIMRDYQHENVVEMYNSYLVG----DELWVVMEFLEGGA 103 (292)
T ss_pred cCCCeEEEEEEeccc----chhHHHHHHHHHHHHHhcCCcchhheeeEEEeC----CEEEEEEecCCCCc
Confidence 457889999988643 234556789999999999999999999999876 48999999999875
No 199
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=99.28 E-value=6.1e-12 Score=72.66 Aligned_cols=63 Identities=17% Similarity=0.249 Sum_probs=50.4
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEET 70 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~ 70 (72)
+..+|..||+|.+.... ........+.+|++++++++||||+++++++.+. ...|+||||+.+
T Consensus 21 ~~~~~~~~~ik~~~~~~--~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~----~~~~~v~e~~~~ 83 (284)
T cd07860 21 NKLTGEVVALKKIRLDT--ETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE----NKLYLVFEFLHQ 83 (284)
T ss_pred ECCCCCEEEEEEccccc--cccccchHHHHHHHHHHhcCCCCCcchhhhcccC----CcEEEEeecccc
Confidence 35678899999987542 1223445788999999999999999999998876 479999999964
No 200
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=99.28 E-value=3.5e-11 Score=69.47 Aligned_cols=61 Identities=21% Similarity=0.222 Sum_probs=50.2
Q ss_pred cceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 5 EGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 5 ~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
++..||+|.+... ........+.+|+.+++.++||||+++++++.+. ...|++|||+++|+
T Consensus 34 ~~~~v~~K~~~~~---~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~----~~~~~~~e~~~~~~ 94 (283)
T cd05048 34 SATSVAIKTLKEN---AEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKE----QPTCMLFEYLAHGD 94 (283)
T ss_pred ceeeEEEEecccC---CCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCC----CceEEEEecCCCCc
Confidence 3467999998753 2344566789999999999999999999998776 37899999999885
No 201
>KOG0660|consensus
Probab=99.28 E-value=3.6e-12 Score=76.26 Aligned_cols=66 Identities=15% Similarity=0.193 Sum_probs=53.0
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCC-CCCCeEEEEEEecC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTH-NDKPRARFLGEYEE 69 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~-~~~~~~~lv~E~~~ 69 (72)
|+.||..||||++... .......++..||+.+|+.++|+|||.+.+++..+. ..-+.+|+|+|+|+
T Consensus 43 ~~~t~~~VAIKKi~~~--F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvYiV~elMe 109 (359)
T KOG0660|consen 43 DKRTGEKVAIKKILNP--FENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVYLVFELME 109 (359)
T ss_pred EcCCCCEeehhhhhhh--hhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccceeEEehhHHh
Confidence 6789999999999732 124456788999999999999999999999987622 12357999999985
No 202
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=99.28 E-value=5.1e-11 Score=67.72 Aligned_cols=66 Identities=18% Similarity=0.240 Sum_probs=52.5
Q ss_pred cccceEEEEEEEEecccc-CchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 3 TEEGVEVVWNEVQFSERK-NFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 3 ~~~g~~vAiK~i~~~~~~-~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
..+|..||+|.+...... ......+.+.+|+.+++.++||||+++++++.+. ..+|++|||+++++
T Consensus 22 ~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~----~~~~lv~e~~~~~~ 88 (258)
T cd06632 22 LDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREE----DNLYIFLELVPGGS 88 (258)
T ss_pred cCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecC----CeEEEEEEecCCCc
Confidence 347889999998764211 1223456789999999999999999999998776 47999999999875
No 203
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.28 E-value=9.1e-12 Score=70.85 Aligned_cols=65 Identities=15% Similarity=0.133 Sum_probs=52.7
Q ss_pred cccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 3 ~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
..+|..+|+|.+..... ........+.+|+++++.++||||+++++.+.+. ...|++|||+.+|+
T Consensus 15 ~~~~~~~~~k~~~~~~~-~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~----~~~~lv~e~~~~~~ 79 (265)
T cd05579 15 KSTGDIYAIKVIKKADM-IRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGK----KNLYLVMEYLPGGD 79 (265)
T ss_pred CCCCCEEEEEEecchhh-hhhhHHHHHHHHHHHHHhCCCcchhHHHHheecC----cEEEEEEecCCCCc
Confidence 45689999999876422 1234567789999999999999999999998776 48999999999875
No 204
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=99.28 E-value=2.1e-11 Score=72.69 Aligned_cols=64 Identities=13% Similarity=0.086 Sum_probs=50.9
Q ss_pred cccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcC-CCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 3 ~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
..+++.||+|.++.. ........+.+|+.+++++ +||||+++++++.... ..++++|||+++|+
T Consensus 34 ~~~~~~va~K~~~~~---~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~---~~~~~v~ey~~~~~ 98 (337)
T cd05054 34 SASCRTVAVKMLKEG---ATASEYKALMTELKILIHIGHHLNVVNLLGACTKPG---GPLMVIVEYCKFGN 98 (337)
T ss_pred ccccceeeeeeccCC---CCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCC---CCEEEEEecCCCCC
Confidence 346789999998743 2234456778999999999 8999999999887653 47899999999985
No 205
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=99.28 E-value=4.6e-11 Score=68.77 Aligned_cols=64 Identities=22% Similarity=0.317 Sum_probs=51.3
Q ss_pred ccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 4 EEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 4 ~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
.++..||+|.+.... .......+.+|+++++.++||||+++++++.... ....+++|||+++|+
T Consensus 31 ~~~~~~avK~~~~~~---~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~--~~~~~lv~e~~~~~~ 94 (284)
T cd05038 31 NTGEQVAVKSLNHSG---EEQHRSDFEREIEILRTLDHENIVKYKGVCEKPG--GRSLRLIMEYLPSGS 94 (284)
T ss_pred CCceEEEEEEecccc---chHHHHHHHHHHHHHHhCCCCChheEEeeeecCC--CCceEEEEecCCCCC
Confidence 467899999987542 1135678999999999999999999999887632 246899999999885
No 206
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=99.27 E-value=4.6e-11 Score=69.36 Aligned_cols=61 Identities=21% Similarity=0.221 Sum_probs=50.4
Q ss_pred cceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 5 EGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 5 ~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
.+..||+|.+... ........+.+|+++++.++||||+++++++... ..++++|||+++|+
T Consensus 45 ~~~~va~K~~~~~---~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~----~~~~lv~e~~~~~~ 105 (296)
T cd05051 45 APVLVAVKVLRPD---ASDNAREDFLKEVKILSRLSDPNIARLLGVCTVD----PPLCMIMEYMENGD 105 (296)
T ss_pred CceeEEEEEecCc---cCHHHHHHHHHHHHHHHhcCCCCEeEEEEEEecC----CCcEEEEecCCCCC
Confidence 4567999998754 2334567889999999999999999999999876 37899999999875
No 207
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=99.27 E-value=3.7e-11 Score=68.95 Aligned_cols=60 Identities=18% Similarity=0.288 Sum_probs=49.3
Q ss_pred ceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 6 GVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 6 g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
...||+|.++.. ........+.+|+.+++.++||||+++++++... ...+++|||+++|+
T Consensus 32 ~~~vaik~~~~~---~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----~~~~iv~e~~~~~~ 91 (266)
T cd05033 32 EIDVAIKTLKAG---SSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKS----RPVMIITEYMENGS 91 (266)
T ss_pred cceEEEEEcCCC---CChHHHHHHHHHHHHHHhCCCCCcceEeEEEecC----CceEEEEEcCCCCC
Confidence 457999988653 2334566788999999999999999999998776 47899999999885
No 208
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=99.27 E-value=1e-11 Score=71.74 Aligned_cols=64 Identities=23% Similarity=0.269 Sum_probs=52.4
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETP 71 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~G 71 (72)
+..+|..||+|.++... ........+.+|+++++.++||||+++++++.+. ..+|++|||++++
T Consensus 22 ~~~~~~~v~vK~~~~~~--~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~----~~~~iv~e~~~~~ 85 (288)
T cd07833 22 NKATGEIVAIKKFKESE--DDEDVKKTALREVKVLRQLRHENIVNLKEAFRRK----GRLYLVFEYVERT 85 (288)
T ss_pred eCCCCcEEEEehhhhhc--ccccchhHHHHHHHHHHhcCCCCeeehhheEEEC----CEEEEEEecCCCC
Confidence 45678899999987542 2233457789999999999999999999999886 4899999999876
No 209
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.27 E-value=3.4e-11 Score=71.99 Aligned_cols=68 Identities=15% Similarity=0.192 Sum_probs=51.7
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCC--CCCeEEEEEEecCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHN--DKPRARFLGEYEETP 71 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~--~~~~~~lv~E~~~~G 71 (72)
|..+|..||+|.+.... ........+.+|+.+++.++||||+++++++..... ....+|+||||++++
T Consensus 42 ~~~~~~~vavK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~~ 111 (359)
T cd07876 42 DTVLGINVAVKKLSRPF--QNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQDVYLVMELMDAN 111 (359)
T ss_pred EcCCCceeEEEEecccc--cchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccceeEEEEeCCCcC
Confidence 45678999999997542 223445678899999999999999999999865421 113579999999865
No 210
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=99.27 E-value=5.8e-11 Score=67.76 Aligned_cols=63 Identities=13% Similarity=0.280 Sum_probs=52.0
Q ss_pred cccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 3 ~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
..+|..+|+|.+.... .......+.+|+.+++.++||||+++++.+... ...|++|||+++|+
T Consensus 23 ~~~~~~~~ik~~~~~~---~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~----~~~~iv~e~~~~~~ 85 (267)
T cd06610 23 LPNNEKVAIKRIDLEK---CQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVG----DELWLVMPYLSGGS 85 (267)
T ss_pred cCCCcEEEEEEeccCC---cchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeC----CEEEEEEeccCCCc
Confidence 3467889999987542 223567789999999999999999999998876 48999999999875
No 211
>KOG0592|consensus
Probab=99.27 E-value=3e-12 Score=80.05 Aligned_cols=66 Identities=24% Similarity=0.248 Sum_probs=54.9
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcC-CCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
++.|++.||||++.+.-. .......-+.+|-.+|..| .||.|++|+..|.|+. .+|+|+||+++|+
T Consensus 94 ~~~t~keYAiKVl~K~~I-ike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~----sLYFvLe~A~nGd 160 (604)
T KOG0592|consen 94 EKATGKEYAIKVLDKRYI-IKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEE----SLYFVLEYAPNGD 160 (604)
T ss_pred ecCCCceeeHhhhhHHHH-HhhcccchhhHHHHHHHHhhCCCCeEEEEEEeeccc----ceEEEEEecCCCc
Confidence 567999999999987532 2233455678999999999 8999999999999984 8999999999995
No 212
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=99.27 E-value=3.7e-11 Score=69.15 Aligned_cols=61 Identities=7% Similarity=-0.002 Sum_probs=49.8
Q ss_pred cceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 5 EGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 5 ~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
++..||+|.+... ........+.+|+.+++.++||||+++++++.+. ...|+||||+++|+
T Consensus 35 ~~~~~aik~~~~~---~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~----~~~~~v~e~~~~~~ 95 (277)
T cd05032 35 PETRVAIKTVNEN---ASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTG----QPTLVVMELMAKGD 95 (277)
T ss_pred cceeEEEEecCCc---cCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCC----CCcEEEEecCCCCC
Confidence 4578999998643 2234456788999999999999999999998876 37899999999875
No 213
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=99.27 E-value=1.2e-11 Score=72.25 Aligned_cols=62 Identities=13% Similarity=0.161 Sum_probs=51.8
Q ss_pred cccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 3 ~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
..+|..||+|.+... .......+.+|+.+++.++||||+++++.+... ...|+||||+++|+
T Consensus 44 ~~~~~~vaiK~~~~~----~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~----~~~~lv~e~~~~~~ 105 (292)
T cd06658 44 KHTGKQVAVKKMDLR----KQQRRELLFNEVVIMRDYHHENVVDMYNSYLVG----DELWVVMEFLEGGA 105 (292)
T ss_pred CCCCCEEEEEEEecc----hHHHHHHHHHHHHHHHhCCCCcHHHHHHheecC----CeEEEEEeCCCCCc
Confidence 457889999998753 234556788999999999999999999998876 48999999999875
No 214
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=99.26 E-value=2.8e-11 Score=70.64 Aligned_cols=62 Identities=19% Similarity=0.284 Sum_probs=51.1
Q ss_pred cccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 3 ~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
..++..||+|.+.... ......+.+|+.+++.++||||+++++++... ...|+|+||+++|+
T Consensus 41 ~~~~~~v~iK~~~~~~----~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~----~~~~lv~e~~~~~~ 102 (293)
T cd06647 41 VATGQEVAIKQMNLQQ----QPKKELIINEILVMRENKHPNIVNYLDSYLVG----DELWVVMEYLAGGS 102 (293)
T ss_pred cCCCCEEEEEEecccc----chHHHHHHHHHHHHhhcCCCCeeehhheeeeC----CcEEEEEecCCCCc
Confidence 4577889999986532 23346788999999999999999999999876 37899999999885
No 215
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=99.26 E-value=2e-11 Score=70.03 Aligned_cols=61 Identities=15% Similarity=0.233 Sum_probs=50.1
Q ss_pred cccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 3 ~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
..++..||+|.+... ......+.+|+.+++.++||||+++++++... ..++++|||+++|+
T Consensus 28 ~~~~~~~~~K~~~~~-----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----~~~~lv~e~~~~~~ 88 (263)
T cd05052 28 KKYSLTVAVKTLKED-----TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTRE----PPFYIITEFMTYGN 88 (263)
T ss_pred ecCCceEEEEEecCC-----chHHHHHHHHHHHHHhCCCCChhheEEEEcCC----CCcEEEEEeCCCCc
Confidence 456788999988643 23346688999999999999999999998776 37899999999875
No 216
>KOG4721|consensus
Probab=99.26 E-value=4.1e-12 Score=80.57 Aligned_cols=51 Identities=24% Similarity=0.329 Sum_probs=41.5
Q ss_pred ceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCC
Q psy8984 6 GVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETP 71 (72)
Q Consensus 6 g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~G 71 (72)
++.||||+++-. -..+|.=|++|+|||||.+.|+|... ++++||||||..|
T Consensus 147 netVAVKKV~el-----------kETdIKHLRkLkH~NII~FkGVCtqs----PcyCIiMEfCa~G 197 (904)
T KOG4721|consen 147 NETVAVKKVREL-----------KETDIKHLRKLKHPNIITFKGVCTQS----PCYCIIMEFCAQG 197 (904)
T ss_pred CceehhHHHhhh-----------hhhhHHHHHhccCcceeeEeeeecCC----ceeEEeeeccccc
Confidence 567888876421 23468889999999999999999876 4999999999987
No 217
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=99.26 E-value=8.9e-11 Score=67.43 Aligned_cols=69 Identities=20% Similarity=0.308 Sum_probs=52.1
Q ss_pred CcccceEEEEEEEEecccc-CchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERK-NFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~-~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..+|..||+|.+...... ........+.+|+.+++.++||||+++++++.+.. ...++++|||+++|+
T Consensus 23 ~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~~~l~~e~~~~~~ 92 (266)
T cd06651 23 DVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRA--EKTLTIFMEYMPGGS 92 (266)
T ss_pred EcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCC--CCEEEEEEeCCCCCc
Confidence 4567889999998754211 11223456889999999999999999999987532 147899999999875
No 218
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=99.26 E-value=5.8e-12 Score=72.76 Aligned_cols=64 Identities=17% Similarity=0.217 Sum_probs=51.1
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETP 71 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~G 71 (72)
+..+|..||+|.++... ........+.+|+.+++.++||||+++++++.+. ..+|+++||++++
T Consensus 21 ~~~~g~~~~~k~~~~~~--~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~----~~~~lv~e~~~~~ 84 (284)
T cd07839 21 NRETHEIVALKRVRLDD--DDEGVPSSALREICLLKELKHKNIVRLYDVLHSD----KKLTLVFEYCDQD 84 (284)
T ss_pred ECCCCcEEEEEEeeccc--ccccCccchhHHHHHHHhcCCCCeeeHHHHhccC----CceEEEEecCCCC
Confidence 45688999999997642 1223345678899999999999999999999876 4899999999753
No 219
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.26 E-value=8.2e-11 Score=69.33 Aligned_cols=63 Identities=16% Similarity=0.266 Sum_probs=50.9
Q ss_pred cccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCC
Q psy8984 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEET 70 (72)
Q Consensus 3 ~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~ 70 (72)
..+|..||+|.+..... ........+.+|+++++.++|||++++++++.+. ...|+||||+.|
T Consensus 47 ~~~~~~valK~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~----~~~~lv~e~~~g 109 (317)
T cd06635 47 VRTNEVVAIKKMSYSGK-QSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLRE----HTAWLVMEYCLG 109 (317)
T ss_pred cCCCcEEEEEEEecCCC-CchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeC----CeEEEEEeCCCC
Confidence 45788999999875422 2234456788999999999999999999999876 378999999975
No 220
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.26 E-value=3.3e-11 Score=69.95 Aligned_cols=65 Identities=11% Similarity=0.161 Sum_probs=51.0
Q ss_pred ccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcC-CCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 4 EEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 4 ~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
.+|..||+|.++...........+.+.+|+.+++.+ +||||+++++++... ..+|+||||+++|+
T Consensus 26 ~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~----~~~~lv~e~~~~~~ 91 (290)
T cd05613 26 DSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTD----TKLHLILDYINGGE 91 (290)
T ss_pred CCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecC----CeEEEEEecCCCCc
Confidence 478899999987532111223456678999999999 699999999998876 47899999999875
No 221
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=99.26 E-value=5.1e-11 Score=69.22 Aligned_cols=61 Identities=20% Similarity=0.219 Sum_probs=50.1
Q ss_pred ccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 4 EEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 4 ~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
.++..+|+|.+... .......+.+|+.++++++||||+++++++... ..+|++|||+++|+
T Consensus 33 ~~~~~~~ik~~~~~----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----~~~~lv~e~~~~~~ 93 (288)
T cd05093 33 QDKILVAVKTLKDA----SDNARKDFHREAELLTNLQHEHIVKFYGVCVEG----DPLIMVFEYMKHGD 93 (288)
T ss_pred CcceEEEEEecCCc----CHHHHHHHHHHHHHHHhCCCCCcceEEEEEecC----CccEEEEEcCCCCC
Confidence 34567899988643 234566789999999999999999999999876 47899999999875
No 222
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=99.25 E-value=4.1e-11 Score=70.82 Aligned_cols=66 Identities=12% Similarity=0.022 Sum_probs=50.6
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCc-ceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHP-NIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~Hp-nIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..++..||+|.+..... ........+.+|..+++.++|+ +|+++++++.+. ..+|+||||++||+
T Consensus 21 ~~~~~~~~avK~~~~~~~-~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~----~~~~lv~E~~~~g~ 87 (324)
T cd05587 21 RKGTDELYAIKILKKDVI-IQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTM----DRLYFVMEYVNGGD 87 (324)
T ss_pred ECCCCCEEEEEEEEHHHh-hhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcC----CEEEEEEcCCCCCc
Confidence 356788999999986421 1233456778899999999765 688899988776 48999999999985
No 223
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=99.25 E-value=6.8e-11 Score=68.68 Aligned_cols=60 Identities=15% Similarity=0.202 Sum_probs=48.3
Q ss_pred ceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 6 GVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 6 g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..+|+|.+... ........+.+|+.+++.++||||+++++.+... ...|++|||+.+|+
T Consensus 30 ~~~~~~k~~~~~---~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----~~~~lv~e~~~~~~ 89 (290)
T cd05045 30 YTTVAVKMLKEN---ASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQD----GPLLLIVEYAKYGS 89 (290)
T ss_pred ceeEEEEecCCC---CCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecC----CCcEEEEEecCCCC
Confidence 356888887643 2234456788999999999999999999998776 36899999999885
No 224
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=99.25 E-value=6.8e-11 Score=67.48 Aligned_cols=64 Identities=20% Similarity=0.275 Sum_probs=53.2
Q ss_pred cccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 3 ~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
..+|..||+|.+..... .......+.+|+.+++.++||||+++++++.+. ..+++|+||+++|+
T Consensus 22 ~~~~~~~~ik~~~~~~~--~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~----~~~~lv~e~~~~~~ 85 (264)
T cd06626 22 LDTGELMAVKEIRIQDN--DPKTIKEIADEMKVLELLKHPNLVKYYGVEVHR----EKVYIFMEYCSGGT 85 (264)
T ss_pred CCCCcEEEEEEEECccc--chHHHHHHHHHHHHHHhCCCCChhheeeeEecC----CEEEEEEecCCCCc
Confidence 45788999999986532 234677899999999999999999999998765 48999999999875
No 225
>KOG0594|consensus
Probab=99.25 E-value=2e-11 Score=72.65 Aligned_cols=66 Identities=17% Similarity=0.234 Sum_probs=53.0
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcc-eeeeeeeeeeCCC--CCCeEEEEEEecC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPN-IVKFHRYWTDTHN--DKPRARFLGEYEE 69 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~Hpn-Iv~l~~~~~~~~~--~~~~~~lv~E~~~ 69 (72)
++.+|..||+|+++... ..........||+.+|+.|+|+| |+++++++.+..+ +...+++|+||++
T Consensus 32 ~~~~g~~VALKkirl~~--~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~l~lvfe~~d 100 (323)
T KOG0594|consen 32 SKRTGKFVALKKIRLEF--EEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGKLYLVFEFLD 100 (323)
T ss_pred EecCCCEEEEEEEeccc--cccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccceEEEEEEeec
Confidence 46789999999999863 12345677899999999999999 9999999987631 1227899999986
No 226
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=99.25 E-value=3e-11 Score=71.51 Aligned_cols=66 Identities=12% Similarity=0.040 Sum_probs=50.2
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCC-CcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLE-HPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~-HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
++.+|..||+|.+..... ........+.+|..+++.+. ||+|+++++++.+. ..+|+||||++||+
T Consensus 21 ~~~~~~~vaiK~~~~~~~-~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~----~~~~lv~Ey~~~g~ 87 (323)
T cd05615 21 RKGTDELYAIKILKKDVV-IQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTV----DRLYFVMEYVNGGD 87 (323)
T ss_pred ECCCCCEEEEEEEEHHHh-hhhhHHHHHHHHHHHHHhccCCCchhheeeEEecC----CEEEEEEcCCCCCc
Confidence 456789999999986421 12234456778999998875 67888899998876 38999999999985
No 227
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.25 E-value=9.6e-11 Score=68.99 Aligned_cols=63 Identities=19% Similarity=0.296 Sum_probs=51.2
Q ss_pred cccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCC
Q psy8984 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEET 70 (72)
Q Consensus 3 ~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~ 70 (72)
..+|..||+|.+..... ........+.+|+++++.++|||++++++++.+. ...|+||||+.+
T Consensus 43 ~~~~~~v~ik~~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----~~~~lv~e~~~~ 105 (313)
T cd06633 43 SHTNEVVAVKKMSYSGK-QTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKE----HTAWLVMEYCLG 105 (313)
T ss_pred CCCCcEEEEEEEecccc-CchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeC----CEEEEEEecCCC
Confidence 45788999999976432 2334456788999999999999999999999886 489999999965
No 228
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=99.24 E-value=7.9e-11 Score=67.48 Aligned_cols=66 Identities=11% Similarity=0.213 Sum_probs=50.5
Q ss_pred cceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCC--CCCCeEEEEEEecCCCC
Q psy8984 5 EGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTH--NDKPRARFLGEYEETPT 72 (72)
Q Consensus 5 ~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~--~~~~~~~lv~E~~~~Gs 72 (72)
++..||+|.++... ........+.+|+.+++.++||||+++++++.... +.....+++|||+++|+
T Consensus 26 ~~~~vaiK~~~~~~--~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~ 93 (273)
T cd05035 26 SQLKVAVKTMKLDI--HTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIPKPMVILPFMKHGD 93 (273)
T ss_pred CcceEEEEEeccCc--CCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCcccEEEEeccCCCC
Confidence 45789999987642 23345667899999999999999999999876543 11124799999999885
No 229
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=99.24 E-value=9.2e-11 Score=67.92 Aligned_cols=61 Identities=21% Similarity=0.233 Sum_probs=50.2
Q ss_pred ccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 4 EEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 4 ~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
.++..+|+|.+... .......+.+|+++++.++||||+++++++.+. ...+++|||+++|+
T Consensus 33 ~~~~~~~~k~~~~~----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----~~~~lv~e~~~~~~ 93 (280)
T cd05092 33 QDKMLVAVKALKEA----SESARQDFQREAELLTVLQHQHIVRFYGVCTEG----RPLLMVFEYMRHGD 93 (280)
T ss_pred CCceEEEEEecCcC----CHHHHHHHHHHHHHHhcCCCCCCceEEEEEecC----CceEEEEecCCCCC
Confidence 45678999987643 234567899999999999999999999998876 37899999999875
No 230
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=99.24 E-value=2e-11 Score=69.94 Aligned_cols=60 Identities=15% Similarity=0.161 Sum_probs=48.5
Q ss_pred ceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 6 GVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 6 g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..+|+|.+... ........+.+|+.+++.++||||+++++++.+. ...+++|||+++|+
T Consensus 26 ~~~~~iK~~~~~---~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----~~~~~v~e~~~~~~ 85 (269)
T cd05044 26 PIRVAVKTLRKG---ATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLN----EPQYIIMELMEGGD 85 (269)
T ss_pred ceeehhhhhhcc---cchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCC----CCeEEEEeccCCCc
Confidence 467899987643 1223456788999999999999999999998776 37899999999875
No 231
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=99.24 E-value=3.8e-11 Score=69.81 Aligned_cols=66 Identities=21% Similarity=0.325 Sum_probs=51.2
Q ss_pred CcccceEEEEEEEEeccccC-chHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKN-FKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..+|..||+|.+....... .......+.+|+.+++.++||||+++++++.+. ..+|+||||+ +|+
T Consensus 21 ~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~----~~~~lv~e~~-~~~ 87 (298)
T cd07841 21 DKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHK----SNINLVFEFM-ETD 87 (298)
T ss_pred ECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecC----CEEEEEEccc-CCC
Confidence 35678899999998653210 122345677899999999999999999999886 4899999999 664
No 232
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.24 E-value=1.8e-11 Score=80.57 Aligned_cols=58 Identities=24% Similarity=0.344 Sum_probs=46.4
Q ss_pred cccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 3 ~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
..+|..||+|++.... . ...+|++.|++++|||||++++++.+.. ..|+|||||++|+
T Consensus 712 ~~~~~~vavK~~~~~~---~-----~~~~~~~~l~~l~HpnIv~~~~~~~~~~----~~~lv~Ey~~~g~ 769 (968)
T PLN00113 712 IKNGMQFVVKEINDVN---S-----IPSSEIADMGKLQHPNIVKLIGLCRSEK----GAYLIHEYIEGKN 769 (968)
T ss_pred CCCCcEEEEEEccCCc---c-----ccHHHHHHHhhCCCCCcceEEEEEEcCC----CCEEEEeCCCCCc
Confidence 4578899999886431 1 1134688999999999999999998763 7899999999986
No 233
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=99.24 E-value=1e-10 Score=67.07 Aligned_cols=59 Identities=20% Similarity=0.229 Sum_probs=48.5
Q ss_pred eEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 7 VEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 7 ~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
..+|+|.+... ......+.+.+|+++++.++||||+++.+++.+.. ..|+||||+++|+
T Consensus 34 ~~~~ik~~~~~---~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~lv~e~~~~~~ 92 (268)
T cd05063 34 VAVAIKTLKPG---YTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFK----PAMIITEYMENGA 92 (268)
T ss_pred eEEEEEecccc---CCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCC----CcEEEEEcCCCCC
Confidence 47999988653 22345667889999999999999999999998763 7899999999875
No 234
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=99.23 E-value=8.3e-11 Score=67.96 Aligned_cols=61 Identities=15% Similarity=0.049 Sum_probs=49.6
Q ss_pred cceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 5 EGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 5 ~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
++..||+|.+... ........+.+|+.+++.++||||+++++++.+.. ..+++|||+.||+
T Consensus 35 ~~~~v~ik~~~~~---~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~----~~~lv~e~~~g~~ 95 (277)
T cd05036 35 VELQVAVKTLPES---CSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERL----PRFILLELMAGGD 95 (277)
T ss_pred CceeEEEEEcCCC---CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCC----CcEEEEecCCCCC
Confidence 5678999987643 22344567899999999999999999999987763 6899999999885
No 235
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=99.23 E-value=1.1e-10 Score=66.18 Aligned_cols=64 Identities=22% Similarity=0.373 Sum_probs=53.1
Q ss_pred cccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 3 ~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
..+|..||+|++.... ........+.+|+++++.++|||++++++.+... ...++++||+++++
T Consensus 22 ~~~~~~~~ik~~~~~~--~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~----~~~~lv~e~~~~~~ 85 (258)
T cd08215 22 KSDGKLYVLKEIDLSN--MSEKEREDALNEVKILKKLNHPNIIKYYESFEEK----GKLCIVMEYADGGD 85 (258)
T ss_pred cCCCcEEEEEEeeccc--CChHHHHHHHHHHHHHHhcCCCChhheEEEEecC----CEEEEEEEecCCCc
Confidence 4568899999997643 2335567788999999999999999999998876 48999999999875
No 236
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=99.23 E-value=6.4e-11 Score=68.14 Aligned_cols=61 Identities=13% Similarity=0.216 Sum_probs=48.6
Q ss_pred cceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 5 EGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 5 ~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+...||+|.+... ........+.+|+.++++++||||+++++++.+. ...|+||||+++|+
T Consensus 34 ~~~~~~~k~~~~~---~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----~~~~lv~e~~~~~~ 94 (275)
T cd05046 34 GETLVLVKALQKT---KDENLQSEFRRELDMFRKLSHKNVVRLLGLCREA----EPHYMILEYTDLGD 94 (275)
T ss_pred CcceEEEEccCCc---cchHHHHHHHHHHHHHHhcCCcceeeeEEEECCC----CcceEEEEecCCCc
Confidence 3457888877543 1223567789999999999999999999998775 37899999999885
No 237
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=99.23 E-value=7.1e-11 Score=68.02 Aligned_cols=58 Identities=21% Similarity=0.204 Sum_probs=46.1
Q ss_pred EEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 8 EVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 8 ~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
.+++|.+... ........+.+|+.+++.++||||+++++.+.+. ...|+||||+++|+
T Consensus 24 ~~~~k~~~~~---~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~----~~~~lv~e~~~~~~ 81 (268)
T cd05086 24 RVVVKELKAN---ASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEA----IPYLLVFEYCELGD 81 (268)
T ss_pred eEEEEEecCC---CChHHHHHHHHHHHHHhccCCcchhheEEEecCC----CccEEEEecCCCCc
Confidence 4566666543 2234567889999999999999999999999876 37899999999885
No 238
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=99.23 E-value=6.4e-11 Score=68.46 Aligned_cols=66 Identities=18% Similarity=0.309 Sum_probs=49.5
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcC-CCcceeeeeeeeeeCC-CCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTH-NDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~-~~~~~~~lv~E~~~~Gs 72 (72)
+..+|..+|+|.+... ......+.+|+.+++.+ +||||+++++++.... +....+|+||||++||+
T Consensus 39 ~~~~~~~~~ik~~~~~-----~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~~ 106 (286)
T cd06638 39 NKKNGSKAAVKILDPI-----HDIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQLWLVLELCNGGS 106 (286)
T ss_pred ECCCCceeEEEeeccc-----cchHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCCeEEEEEeecCCCC
Confidence 3567889999987542 12335678899999999 7999999999875321 11346899999999985
No 239
>KOG0576|consensus
Probab=99.23 E-value=7.9e-13 Score=84.32 Aligned_cols=64 Identities=22% Similarity=0.231 Sum_probs=55.6
Q ss_pred CCcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 1 MDTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 1 ~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+|+.+|+..|+|.+++.. .+..+-+++|+-+++..+|||||.+++.|...+ .+||.||||.||+
T Consensus 35 Rd~~s~elaavkvVkLep----~dd~~~iqqei~~~~dc~h~nivay~gsylr~d----klwicMEycgggs 98 (829)
T KOG0576|consen 35 RDKRSGELAAVKVVKLEP----GDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRD----KLWICMEYCGGGS 98 (829)
T ss_pred cccccCchhhheeeeccC----CccccccccceeeeecCCCcChHHHHhhhhhhc----CcEEEEEecCCCc
Confidence 477899999999999852 345677889999999999999999999997763 8999999999996
No 240
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=99.23 E-value=8.9e-11 Score=66.72 Aligned_cols=60 Identities=23% Similarity=0.174 Sum_probs=50.1
Q ss_pred ceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 6 GVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 6 g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
|..||+|.+.... .......+.+|++++++++||||+++++++.+. ...|++|||+++|+
T Consensus 19 ~~~v~~K~~~~~~---~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~----~~~~~v~e~~~~~~ 78 (251)
T cd05041 19 NTEVAVKTCRSTL---PPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQK----QPIYIVMELVPGGS 78 (251)
T ss_pred CCcEEEEeccccC---CHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecC----CCeEEEEEcCCCCc
Confidence 7889999887642 223566789999999999999999999998876 37899999998874
No 241
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=99.23 E-value=9.2e-11 Score=68.24 Aligned_cols=61 Identities=25% Similarity=0.221 Sum_probs=49.3
Q ss_pred ccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 4 EEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 4 ~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
.++..+|+|.+... .......+.+|+.+++.++||||+++++++... ...++||||+++|+
T Consensus 33 ~~~~~~~~k~~~~~----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----~~~~lv~e~~~~~~ 93 (291)
T cd05094 33 KDKMLVAVKALKDP----TLAARKDFQREAELLTNLQHEHIVKFYGVCGDG----DPLIMVFEYMKHGD 93 (291)
T ss_pred CcceeeEEEecCCc----cHHHHHHHHHHHHHHhcCCCCCcceEEEEEccC----CceEEEEecCCCCc
Confidence 34567888887643 234456789999999999999999999999876 37899999999875
No 242
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=99.23 E-value=4.5e-11 Score=68.40 Aligned_cols=59 Identities=10% Similarity=0.118 Sum_probs=48.2
Q ss_pred cceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 5 EGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 5 ~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
++..||+|.++... ...+.+.+|+.++++++||||+++++++... +.+|++|||+++|+
T Consensus 29 ~~~~v~iK~~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----~~~~lv~e~~~~~~ 87 (261)
T cd05068 29 NTTPVAVKTLKPGT-----MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLE----EPIYIVTELMKYGS 87 (261)
T ss_pred CCeEEEEEeeCCCc-----ccHHHHHHHHHHHHHCCCCCccceeEEEecC----CCeeeeeecccCCc
Confidence 45679999986532 2345688999999999999999999998776 47899999998875
No 243
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=99.23 E-value=4.9e-11 Score=68.11 Aligned_cols=59 Identities=14% Similarity=0.172 Sum_probs=49.3
Q ss_pred ceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 6 GVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 6 g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..+|+|.+... .......+.+|+.+++.++||||+++++++.+. ...+++|||+++|+
T Consensus 30 ~~~~~~k~~~~~----~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~----~~~~lv~e~~~~~~ 88 (261)
T cd05148 30 RVRVAIKILKSD----DLLKQQDFQKEVQALKRLRHKHLISLFAVCSVG----EPVYIITELMEKGS 88 (261)
T ss_pred CCcEEEEecccc----chhhHHHHHHHHHHHhcCCCcchhheeeeEecC----CCeEEEEeecccCC
Confidence 678999998753 233456788999999999999999999998776 37899999999875
No 244
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=99.23 E-value=5.9e-11 Score=68.92 Aligned_cols=62 Identities=21% Similarity=0.183 Sum_probs=49.1
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEET 70 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~ 70 (72)
++.+|..||+|.+.... .......+.+|+.+++.++||||+++++++.+. ...|+||||+.+
T Consensus 26 ~~~~~~~~~iK~~~~~~---~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~----~~~~lv~e~~~~ 87 (291)
T cd07870 26 SRINGQLVALKVISMKT---EEGVPFTAIREASLLKGLKHANIVLLHDIIHTK----ETLTFVFEYMHT 87 (291)
T ss_pred EcCCCcEEEEEEecccC---cCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecC----CeEEEEEecccC
Confidence 34578899999987542 122334567899999999999999999999876 478999999964
No 245
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=99.23 E-value=1.2e-10 Score=67.75 Aligned_cols=62 Identities=16% Similarity=0.214 Sum_probs=51.3
Q ss_pred cccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 3 ~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
..+|..+|+|.+... .......+.+|+.+++.++||||+++++++... ...++++||++||+
T Consensus 41 ~~~~~~~~iK~~~~~----~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~----~~~~~v~e~~~~~~ 102 (285)
T cd06648 41 KSTGRQVAVKKMDLR----KQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVG----DELWVVMEFLEGGA 102 (285)
T ss_pred CCCCCEEEEEEEecc----chhHHHHHHHHHHHHHHcCCCChheEEEEEEcC----CeEEEEEeccCCCC
Confidence 457889999998653 233456688999999999999999999998876 47899999999875
No 246
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=99.23 E-value=1.1e-10 Score=67.70 Aligned_cols=61 Identities=15% Similarity=0.147 Sum_probs=49.0
Q ss_pred cceEEEEEEEEeccccCchHHHHHHHHHHHHHhcC-CCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 5 EGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 5 ~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
....+|+|.+... ........+.+|+.+++.+ +||||+++++++... ..+|++|||+.+|+
T Consensus 41 ~~~~~a~k~~~~~---~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~----~~~~li~e~~~~~~ 102 (293)
T cd05053 41 ETSTVAVKMLKDD---ATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQE----GPLYVVVEYAAHGN 102 (293)
T ss_pred CceeEEEEEccCC---CCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCC----CCeEEEEEeCCCCc
Confidence 3467999988753 1234456688999999999 899999999998776 37999999999885
No 247
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=99.23 E-value=3.4e-11 Score=72.38 Aligned_cols=67 Identities=12% Similarity=0.117 Sum_probs=50.8
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCC-CCCeEEEEEEecCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHN-DKPRARFLGEYEET 70 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~-~~~~~~lv~E~~~~ 70 (72)
|..+|..||+|++.... ........+.+|+.+|+.++||||+++++++.+... ....+|+||||+.+
T Consensus 21 ~~~~~~~vaiK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~ 88 (372)
T cd07853 21 DPRDGKRVALKKMPNVF--QNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIYVVTELMQS 88 (372)
T ss_pred ECCCCCEEEEEeccccc--cchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEEEEeecccc
Confidence 45678999999986431 223345678899999999999999999999876521 11268999999875
No 248
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.23 E-value=1.7e-10 Score=65.24 Aligned_cols=66 Identities=23% Similarity=0.336 Sum_probs=53.2
Q ss_pred cccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 3 ~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
..+|..|++|.+.... ......+.+.+|+.++++++||||+++++.+.+.. ...+++++||+++++
T Consensus 22 ~~~~~~~~ik~~~~~~--~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~~~lv~e~~~~~~ 87 (260)
T cd06606 22 KDTGELMAVKSVELSG--DSEEELEALEREIRILSSLQHPNIVRYYGSERDEE--KNTLNIFLEYVSGGS 87 (260)
T ss_pred CCCCcEEEEEEeeccc--cchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCC--CCeEEEEEEecCCCc
Confidence 4578899999997653 12355678899999999999999999999987751 137899999998875
No 249
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.23 E-value=1.1e-10 Score=67.56 Aligned_cols=61 Identities=20% Similarity=0.295 Sum_probs=51.0
Q ss_pred cccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 3 ~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
..++..||+|.+.... . ....+.+|+++++.++||||+++++++... ...|+++||+++++
T Consensus 41 ~~~~~~~~iK~~~~~~----~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~----~~~~lv~e~~~~~~ 101 (286)
T cd06614 41 RATGKEVAIKKMRLRK----Q-NKELIINEILIMKDCKHPNIVDYYDSYLVG----DELWVVMEYMDGGS 101 (286)
T ss_pred ccCCcEEEEEEEecCc----h-hHHHHHHHHHHHHHCCCCCeeEEEEEEEEC----CEEEEEEeccCCCc
Confidence 3467889999997642 1 456788999999999999999999999887 48999999999875
No 250
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=99.22 E-value=9.6e-11 Score=66.79 Aligned_cols=58 Identities=10% Similarity=0.150 Sum_probs=48.6
Q ss_pred eEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 7 VEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 7 ~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
..||+|.+.... .....+.+.+|+.++++++||||+++++.+.+ . ..+++|||+++|+
T Consensus 24 ~~vaiK~~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~----~~~~v~e~~~~~~ 81 (257)
T cd05040 24 IPVAVKCLKSDK---LSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-H----PLMMVTELAPLGS 81 (257)
T ss_pred eEEEEeecCCcc---cHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-C----eEEEEEEecCCCc
Confidence 469999987642 12556788999999999999999999999877 3 7899999999885
No 251
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.22 E-value=1.2e-10 Score=66.71 Aligned_cols=65 Identities=20% Similarity=0.308 Sum_probs=50.9
Q ss_pred cccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcC-CCcceeeeeeeeeeCCC--CCCeEEEEEEecCCCC
Q psy8984 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHN--DKPRARFLGEYEETPT 72 (72)
Q Consensus 3 ~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~--~~~~~~lv~E~~~~Gs 72 (72)
+.++..+|+|.+.... .....+.+|+.+++.+ +||||+++++++.+... ....+|++|||+++|+
T Consensus 28 ~~~~~~~~~k~~~~~~-----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~ 95 (275)
T cd06608 28 KKTGQLVAIKIMDIIE-----DEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQLWLVMELCGGGS 95 (275)
T ss_pred CCCCcEEEEEEEecCc-----hhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceEEEEEEEcCCCCc
Confidence 4567899999987531 2346789999999998 79999999999976431 1245899999999874
No 252
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.22 E-value=7.1e-11 Score=69.06 Aligned_cols=61 Identities=16% Similarity=0.183 Sum_probs=49.3
Q ss_pred cceEEEEEEEEeccccCchHHHHHHHHHHHHHhcC-CCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 5 EGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 5 ~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
++..||+|.+... ........+.+|+.+++.+ +||||+++++++... ..+|++|||+++|+
T Consensus 46 ~~~~v~iK~~~~~---~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~----~~~~lv~e~~~~~~ 107 (304)
T cd05101 46 EAVTVAVKMLKDD---ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD----GPLYVIVEYASKGN 107 (304)
T ss_pred cceeEEeeecccc---cchHHHHHHHHHHHHHHhhccCCCchheeEEEecC----CceEEEEecCCCCc
Confidence 4557999988643 1234456789999999999 899999999998776 37899999999885
No 253
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=99.22 E-value=9.3e-11 Score=66.66 Aligned_cols=59 Identities=22% Similarity=0.249 Sum_probs=50.0
Q ss_pred ccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 4 EEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 4 ~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
.++..+|+|.+... ...+.+.+|+.+++.++||||+++++++.+. ..+|+++||+++++
T Consensus 26 ~~~~~~~~k~~~~~------~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~----~~~~l~~e~~~~~~ 84 (256)
T cd06612 26 ETGQVVAIKVVPVE------EDLQEIIKEISILKQCDSPYIVKYYGSYFKN----TDLWIVMEYCGAGS 84 (256)
T ss_pred CCCcEEEEEEeecH------HHHHHHHHHHHHHHhCCCCcEeeeeeeeecC----CcEEEEEecCCCCc
Confidence 45788999998653 1267889999999999999999999999876 48999999999875
No 254
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=99.21 E-value=7.4e-11 Score=67.88 Aligned_cols=59 Identities=14% Similarity=0.133 Sum_probs=46.9
Q ss_pred ceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 6 GVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 6 g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
...||+|.+... .......+.+|+.+++.++||||+++++++.+.. ..+++|||+++|+
T Consensus 32 ~~~v~~k~~~~~----~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~----~~~lv~e~~~~~~ 90 (262)
T cd05077 32 EIKVILKVLDPS----HRDISLAFFETASMMRQVSHKHIVLLYGVCVRDV----ENIMVEEFVEFGP 90 (262)
T ss_pred ceeEEEeecChh----hhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC----CCEEEEecccCCC
Confidence 346888887543 2234557888999999999999999999987763 6899999999885
No 255
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=99.21 E-value=1.2e-10 Score=66.36 Aligned_cols=59 Identities=17% Similarity=0.197 Sum_probs=49.4
Q ss_pred cceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 5 EGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 5 ~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
.|..||+|.+... ....+.+.+|+.+++.++||||+++++++.+. ...|+||||+++|+
T Consensus 28 ~~~~v~iK~~~~~-----~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~----~~~~~v~e~~~~~~ 86 (256)
T cd05039 28 RGQKVAVKCLKDD-----STAAQAFLAEASVMTTLRHPNLVQLLGVVLQG----NPLYIVTEYMAKGS 86 (256)
T ss_pred cCcEEEEEEeccc-----hhHHHHHHHHHHHHHhcCCcceeeeEEEEcCC----CCeEEEEEecCCCc
Confidence 4778999998753 12456788999999999999999999998875 47899999999875
No 256
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=99.21 E-value=6.3e-11 Score=67.86 Aligned_cols=58 Identities=14% Similarity=0.185 Sum_probs=46.7
Q ss_pred ceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 6 GVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 6 g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..+|+|.+.... .....+.+|+.+++.++||||+++++++.+. ..+|++|||+.+|+
T Consensus 28 ~~~~aik~~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----~~~~lv~e~~~~~~ 85 (256)
T cd05113 28 QYDVAIKMIKEGS-----MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQ----RPIYIVTEYMSNGC 85 (256)
T ss_pred CCcEEEEEcCCCc-----ccHHHHHHHHHHHhcCCCCCeeeEEEEEccC----CCcEEEEEcCCCCc
Confidence 3469999886431 1235688999999999999999999998766 36899999999874
No 257
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=99.21 E-value=9.1e-11 Score=67.09 Aligned_cols=59 Identities=12% Similarity=0.160 Sum_probs=48.2
Q ss_pred cceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 5 EGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 5 ~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
++..||+|.+... ....+.+.+|+.+++.++||||+++++++.+. ...|++|||+++|+
T Consensus 29 ~~~~v~iK~~~~~-----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----~~~~lv~e~~~~~~ 87 (261)
T cd05072 29 NSTKVAVKTLKPG-----TMSVQAFLEEANLMKTLQHDKLVRLYAVVTKE----EPIYIITEYMAKGS 87 (261)
T ss_pred CCceEEEEEccCC-----chhHHHHHHHHHHHHhCCCCCeeeEEEEEcCC----CCcEEEEecCCCCc
Confidence 4567999987643 12356789999999999999999999998776 47899999999885
No 258
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.21 E-value=1.3e-10 Score=68.14 Aligned_cols=61 Identities=13% Similarity=0.140 Sum_probs=48.9
Q ss_pred cceEEEEEEEEeccccCchHHHHHHHHHHHHHhcC-CCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 5 EGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 5 ~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
++..+|+|.+... ........+.+|+.+++.+ +||||+++++++... ..+|+||||+.+|+
T Consensus 49 ~~~~~aiK~~~~~---~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~----~~~~lv~e~~~~~~ 110 (307)
T cd05098 49 RVTKVAVKMLKSD---ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD----GPLYVIVEYASKGN 110 (307)
T ss_pred ccceEEEEeccCC---CChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecC----CceEEEEecCCCCc
Confidence 3457999988753 1234456788999999999 799999999999776 37899999999875
No 259
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.21 E-value=6.9e-11 Score=69.24 Aligned_cols=65 Identities=25% Similarity=0.278 Sum_probs=49.6
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEET 70 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~ 70 (72)
+..+|..||+|.++.... .......+.+|+.++++++||||+++++++.... ...+|+||||+.+
T Consensus 28 ~~~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~~~lv~e~~~~ 92 (309)
T cd07845 28 DTTSGEIVALKKVRMDNE--RDGIPISSLREITLLLNLRHPNIVELKEVVVGKH--LDSIFLVMEYCEQ 92 (309)
T ss_pred ECCCCcEEEEEEEEeccC--CCCCcchhhHHHHHHHhCCCCCCcceEEEEecCC--CCeEEEEEecCCC
Confidence 456789999999976421 1222345678999999999999999999987642 2368999999975
No 260
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.21 E-value=1.3e-10 Score=68.29 Aligned_cols=61 Identities=15% Similarity=0.156 Sum_probs=48.8
Q ss_pred cceEEEEEEEEeccccCchHHHHHHHHHHHHHhcC-CCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 5 EGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 5 ~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
.+..+|+|.++.. ........+.+|+.+++.+ +||||+++++++.+. ..+|++|||+++|+
T Consensus 43 ~~~~~aiK~~~~~---~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~----~~~~lv~e~~~~g~ 104 (314)
T cd05099 43 QTVTVAVKMLKDN---ATDKDLADLISEMELMKLIGKHKNIINLLGVCTQE----GPLYVIVEYAAKGN 104 (314)
T ss_pred cceEEEEEecCCC---CChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccC----CceEEEEecCCCCc
Confidence 3457999988643 2234456788999999999 699999999998776 37899999999885
No 261
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=99.21 E-value=1.3e-10 Score=66.34 Aligned_cols=59 Identities=19% Similarity=0.215 Sum_probs=48.3
Q ss_pred ceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 6 GVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 6 g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..+|+|.+.... .......+.+|+.+++.++||||+++++++... ..+++|||+++|+
T Consensus 23 ~~~~~iK~~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-----~~~~v~e~~~~~~ 81 (257)
T cd05060 23 EVEVAVKTLKQEH---IAAGKKEFLREASVMAQLDHPCIVRLIGVCKGE-----PLMLVMELAPLGP 81 (257)
T ss_pred cceEEEEeccccc---chHHHHHHHHHHHHHHhcCCCCeeeEEEEEcCC-----ceEEEEEeCCCCc
Confidence 4789999987642 224566789999999999999999999987643 6899999999885
No 262
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.21 E-value=1.5e-10 Score=66.91 Aligned_cols=61 Identities=16% Similarity=0.136 Sum_probs=49.8
Q ss_pred cceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 5 EGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 5 ~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
.+..||+|.++.. ........+.+|+.+++.++||||+++++++.+.. ..++++||+.+|+
T Consensus 34 ~~~~vaiK~~~~~---~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~----~~~~~~e~~~~~~ 94 (283)
T cd05091 34 QTQAVAIKTLKDK---AEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQ----PLSMIFSYCSHSD 94 (283)
T ss_pred ceeEEEEEEccCC---CCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCC----ceEEEEEcCCCCc
Confidence 4678999998753 22344567889999999999999999999998763 7899999998764
No 263
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.20 E-value=4.3e-11 Score=67.97 Aligned_cols=65 Identities=17% Similarity=0.261 Sum_probs=52.8
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..+|..+|+|.+..... .......+.+|+.+++.++||||+++++++.+. ...|+||||+++++
T Consensus 21 ~~~~~~~~~ik~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~----~~~~~v~e~~~~~~ 85 (256)
T cd08530 21 RLSDNQFYALKEVDLGSM--SQKEREDAVNEIRILASVNHPNIISYKEAFLDG----NKLCIVMEYAPFGD 85 (256)
T ss_pred ECCCCCEEEEEEEehhhc--cHHHHHHHHHHHHHHHhCCCCCchhhhhhhccC----CEEEEEehhcCCCC
Confidence 345788999999976431 234456778899999999999999999998876 48999999998875
No 264
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=99.20 E-value=1.2e-10 Score=66.05 Aligned_cols=60 Identities=27% Similarity=0.275 Sum_probs=50.1
Q ss_pred ceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 6 GVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 6 g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..||+|.+... ........+.+|+.+++.++||||+++++++.+. ...|++|||+++|+
T Consensus 28 ~~~vaiK~~~~~---~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~----~~~~~i~e~~~~~~ 87 (258)
T smart00219 28 EVEVAVKTLKED---ADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEE----EPLMIVMEYMEGGD 87 (258)
T ss_pred CceEEEEEccCC---CChHHHHHHHHHHHHHHhcCCCchheEEEEEcCC----CeeEEEEeccCCCC
Confidence 488999998654 2223567889999999999999999999999876 37999999999875
No 265
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=99.20 E-value=1.1e-10 Score=68.49 Aligned_cols=62 Identities=18% Similarity=0.245 Sum_probs=47.8
Q ss_pred ccce--EEEEEEEEeccccCchHHHHHHHHHHHHHhcC-CCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 4 EEGV--EVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 4 ~~g~--~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
.+|. .+|+|.++.. ........+.+|+.++.++ +||||+++++++.+. ..+|++|||+++|+
T Consensus 30 ~~~~~~~~~ik~~~~~---~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~----~~~~lv~e~~~~~~ 94 (303)
T cd05088 30 KDGLRMDAAIKRMKEY---ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHR----GYLYLAIEYAPHGN 94 (303)
T ss_pred cCCceeeEEEEEeccc---CCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCC----CCceEEEEeCCCCc
Confidence 3454 4577766532 2334556788999999999 899999999999776 37999999999875
No 266
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=99.20 E-value=6.9e-11 Score=67.23 Aligned_cols=65 Identities=23% Similarity=0.282 Sum_probs=51.6
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..++..||+|.+..... .........+|+.++++++||||+++++++.+. ..++++|||+.+|+
T Consensus 20 ~~~~~~~~~~K~~~~~~~--~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~----~~~~~v~~~~~~~~ 84 (260)
T PF00069_consen 20 NKKNGQKVAVKIIDKSEI--EEEEREENIREIKILRRLRHPNIVQILDVFQDD----NYLYIVMEYCPGGS 84 (260)
T ss_dssp ETTTTEEEEEEEEESTTH--HHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEES----SEEEEEEEEETTEB
T ss_pred ECCCCeEEEEEEeccccc--cccccchhhhhhhcccccccccccccccccccc----cccccccccccccc
Confidence 456788999999987531 222333456699999999999999999999886 48999999999864
No 267
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=99.20 E-value=1.7e-10 Score=65.97 Aligned_cols=62 Identities=8% Similarity=0.063 Sum_probs=48.3
Q ss_pred cceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 5 EGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 5 ~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
.+..||+|.+... ........+.+|+.+++.++||||+++++++...+ ...+++|||+.+|+
T Consensus 22 ~~~~~aiK~~~~~---~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~---~~~~lv~e~~~~~~ 83 (262)
T cd05058 22 QKIHCAVKSLNRI---TDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSE---GSPLVVLPYMKHGD 83 (262)
T ss_pred ceEEEEEEecCcc---CCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCC---CCcEEEEecCCCCC
Confidence 3467999987532 22345667889999999999999999999876443 46789999999885
No 268
>KOG4236|consensus
Probab=99.20 E-value=6.6e-11 Score=74.83 Aligned_cols=64 Identities=19% Similarity=0.212 Sum_probs=54.0
Q ss_pred CCcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCC
Q psy8984 1 MDTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEET 70 (72)
Q Consensus 1 ~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~ 70 (72)
+++.||+.||||.|.+... ......++..|+.||++++||-||.+--.|++.+ .+|.|||-+.|
T Consensus 584 ~hRktGrdVAvKvIdKlrF--p~kqesqlR~EVaILq~l~HPGiV~le~M~ET~e----rvFVVMEKl~G 647 (888)
T KOG4236|consen 584 KHRKTGRDVAVKVIDKLRF--PTKQESQLRNEVAILQNLHHPGIVNLECMFETPE----RVFVVMEKLHG 647 (888)
T ss_pred eecccCceeeeeeeecccC--CCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCc----eEEEEehhhcc
Confidence 3678999999999987532 3345578899999999999999999999998874 89999998765
No 269
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.20 E-value=1.1e-10 Score=67.82 Aligned_cols=64 Identities=19% Similarity=0.250 Sum_probs=49.8
Q ss_pred cccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCC
Q psy8984 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEET 70 (72)
Q Consensus 3 ~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~ 70 (72)
..+|..+|+|.++.... .......+.+|+.+++.++||||+++++++.+.. ...+|+||||+.+
T Consensus 27 ~~~~~~~~ik~~~~~~~--~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~--~~~~~lv~e~~~~ 90 (293)
T cd07843 27 KKTGEIVALKKLKMEKE--KEGFPITSLREINILLKLQHPNIVTVKEVVVGSN--LDKIYMVMEYVEH 90 (293)
T ss_pred CCCCcEEEEEEEeeccc--cccchhhHHHHHHHHHhcCCCCEEEEEEEEEecC--CCcEEEEehhcCc
Confidence 45788999999986532 2233445678999999999999999999987652 2479999999974
No 270
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=99.20 E-value=7.8e-11 Score=69.74 Aligned_cols=66 Identities=12% Similarity=0.042 Sum_probs=48.8
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcC---CCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL---EHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l---~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..+|..||+|.+..... ..........+|..++..+ +||||+++++.+.+. ..+|+||||+.+|+
T Consensus 14 ~~~~~~~~avK~~~~~~~-~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~----~~~~lv~e~~~~g~ 82 (330)
T cd05586 14 KKDTRRIYAMKVLSKKEI-VAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTD----SDLYLVTDYMSGGE 82 (330)
T ss_pred ECCCCCEEEEEEEeHHHH-hhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecC----CeEEEEEcCCCCCh
Confidence 456789999999975421 1122334455677777654 799999999999876 48999999999885
No 271
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=99.20 E-value=8.2e-11 Score=67.62 Aligned_cols=58 Identities=21% Similarity=0.194 Sum_probs=47.2
Q ss_pred eEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 7 VEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 7 ~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
..||+|..... ......+.+.+|+.+++.++||||+++++++.+. ..|+||||+++|+
T Consensus 35 ~~v~ik~~~~~---~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-----~~~lv~e~~~~~~ 92 (270)
T cd05056 35 IAVAVKTCKNC---TSPSVREKFLQEAYIMRQFDHPHIVKLIGVITEN-----PVWIVMELAPLGE 92 (270)
T ss_pred cceEEEecCCc---CCHHHHHHHHHHHHHHHhCCCCchhceeEEEcCC-----CcEEEEEcCCCCc
Confidence 46898987653 2244567889999999999999999999998764 5789999999885
No 272
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.19 E-value=2.2e-10 Score=64.87 Aligned_cols=64 Identities=25% Similarity=0.312 Sum_probs=52.8
Q ss_pred cccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 3 ~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
..+|..||+|.+..... .......+.+|++++++++||||+++++++.+. ...+++|||+++++
T Consensus 22 ~~~~~~~~ik~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~----~~~~~v~e~~~~~~ 85 (254)
T cd06627 22 LETGDFVAIKQISLEKI--KEEALKSIMQEIDLLKNLKHPNIVKYIGSIETS----DSLYIILEYAENGS 85 (254)
T ss_pred cCCCcEEEEEEeccccc--CHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeC----CEEEEEEecCCCCc
Confidence 45678999999976532 234567889999999999999999999998876 48999999998874
No 273
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=99.19 E-value=1.4e-10 Score=65.80 Aligned_cols=61 Identities=18% Similarity=0.242 Sum_probs=50.8
Q ss_pred cceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 5 EGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 5 ~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
++..||+|.+.... .......+.+|+.+++.++||||+++++++.+. ..++++|||+++|+
T Consensus 22 ~~~~~~ik~~~~~~---~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~----~~~~lv~e~~~~~~ 82 (262)
T cd00192 22 KTTEVAVKTLKEDA---SEEERKDFLKEARVMKKLGHPNVVRLLGVCTEE----EPLYLVLEYMEGGD 82 (262)
T ss_pred CCceEEeEeecccc---chhHHHHHHHHHHHHhhcCCCChheeeeeecCC----CceEEEEEeccCCc
Confidence 37789999987642 222467889999999999999999999998875 48999999998885
No 274
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.19 E-value=1.6e-10 Score=66.03 Aligned_cols=66 Identities=15% Similarity=0.084 Sum_probs=46.8
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHH-hcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENL-TQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l-~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..+|..||+|.+..... ........+..|..++ ...+||||+++++++.+. ..+|+||||+++|+
T Consensus 17 ~~~~~~~vavK~~~~~~~-~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~----~~~~lv~e~~~~~~ 83 (260)
T cd05611 17 KRSTGDYFAIKVLKKSDM-IAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSK----DYLYLVMEYLNGGD 83 (260)
T ss_pred ecCCCCeEEEEEecchhh-hHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcC----CeEEEEEeccCCCC
Confidence 345788999999875421 1112233445565544 456999999999999876 48999999999885
No 275
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=99.19 E-value=1.5e-10 Score=68.46 Aligned_cols=66 Identities=12% Similarity=0.027 Sum_probs=50.4
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcC-CCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..++..||+|.+..... ..........+|..++..+ +||+|+++++++.+. ..+|+||||+++|+
T Consensus 21 ~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~----~~~~lv~E~~~~g~ 87 (323)
T cd05616 21 RKGTDELYAIKILKKDVV-IQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTM----DRLYFVMEYVNGGD 87 (323)
T ss_pred ECCCCCEEEEEEEEHHHh-hhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecC----CEEEEEEcCCCCCC
Confidence 456788999999986421 1223345567788888877 689999999999876 48999999999985
No 276
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=99.19 E-value=1.6e-10 Score=66.55 Aligned_cols=58 Identities=17% Similarity=0.191 Sum_probs=46.6
Q ss_pred EEEEEEEEeccccCchHHHHHHHHHHHHHhcC-CCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 8 EVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 8 ~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
.+|+|.+... ........+.+|+.+++++ +||||+++++++... ..+|++|||+++|+
T Consensus 24 ~~~~k~~~~~---~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~----~~~~lv~e~~~~~~ 82 (270)
T cd05047 24 DAAIKRMKEY---ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHR----GYLYLAIEYAPHGN 82 (270)
T ss_pred EEEEEEcccc---CCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecC----CCceEEEEeCCCCc
Confidence 4688877632 2334556788999999999 899999999999776 37899999999885
No 277
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.19 E-value=9.1e-11 Score=68.28 Aligned_cols=67 Identities=24% Similarity=0.287 Sum_probs=50.2
Q ss_pred cccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCC------CCCeEEEEEEecCCC
Q psy8984 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHN------DKPRARFLGEYEETP 71 (72)
Q Consensus 3 ~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~------~~~~~~lv~E~~~~G 71 (72)
..+|..||+|.++.... .......+.+|+++++.++||||+++++++.+... +...+|+++||++++
T Consensus 29 ~~~~~~v~iK~~~~~~~--~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~ 101 (302)
T cd07864 29 KDTGELVALKKVRLDNE--KEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDFKKDKGAFYLVFEYMDHD 101 (302)
T ss_pred CCCCcEEEEEEEeeccc--ccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhccccCCcEEEEEcccCcc
Confidence 45788999999986431 12234567889999999999999999999876420 123689999999863
No 278
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=99.18 E-value=2.1e-10 Score=65.82 Aligned_cols=65 Identities=15% Similarity=0.238 Sum_probs=50.2
Q ss_pred cccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcC-CCcceeeeeeeeeeCCCC--CCeEEEEEEecCCCC
Q psy8984 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHND--KPRARFLGEYEETPT 72 (72)
Q Consensus 3 ~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~~--~~~~~lv~E~~~~Gs 72 (72)
..++..||+|.+.... .....+.+|+.+++.+ +||||+++++++....++ ...+|++|||+.+|+
T Consensus 28 ~~~~~~~aik~~~~~~-----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~ 95 (272)
T cd06637 28 VKTGQLAAIKVMDVTG-----DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGS 95 (272)
T ss_pred cCCCcEEEEEEEEcCC-----ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEEEEEEEcCCCCc
Confidence 4578899999987532 2345678899999998 799999999998764321 246899999999875
No 279
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.18 E-value=5.7e-11 Score=67.34 Aligned_cols=65 Identities=17% Similarity=0.195 Sum_probs=52.3
Q ss_pred cccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 3 ~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
..+|..+|+|.+..... ........+.+|+.+++.++||||+++++.+.+. ..+|++|||+.+|+
T Consensus 15 ~~~~~~~~~k~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----~~~~~v~e~~~~~~ 79 (250)
T cd05123 15 KDTGKLYAMKVLKKKKI-IKRKEVEHTLTERNILSRINHPFIVKLHYAFQTE----EKLYLVLEYAPGGE 79 (250)
T ss_pred CCCCcEEEEEEeehhhh-cchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecC----CeeEEEEecCCCCc
Confidence 34688999999876532 2223556788999999999999999999998776 48999999998774
No 280
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.18 E-value=2.4e-10 Score=67.17 Aligned_cols=64 Identities=19% Similarity=0.297 Sum_probs=50.7
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEET 70 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~ 70 (72)
++.+|..+|+|.+..... ........+.+|+++++.++|||++++++++.+. ...|+||||+.|
T Consensus 36 ~~~~~~~~~ik~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----~~~~lv~e~~~~ 99 (308)
T cd06634 36 DVRNSEVVAIKKMSYSGK-QSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLRE----HTAWLVMEYCLG 99 (308)
T ss_pred EcCCCcEEEEEEEecccc-cChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcC----CeeEEEEEccCC
Confidence 345788899999875322 2234456788999999999999999999999876 478999999974
No 281
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=99.18 E-value=9.1e-11 Score=70.04 Aligned_cols=68 Identities=10% Similarity=0.124 Sum_probs=51.5
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCC--CCCeEEEEEEecCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHN--DKPRARFLGEYEETP 71 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~--~~~~~~lv~E~~~~G 71 (72)
|..++..||+|.+.... ........+.+|+.+++.++||||+++++++..... ....+|++|||++++
T Consensus 38 ~~~~~~~vaiK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~~ 107 (355)
T cd07874 38 DAVLDRNVAIKKLSRPF--QNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEFQDVYLVMELMDAN 107 (355)
T ss_pred ecCCCceEEEEEeCCcc--cChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccccceeEEEhhhhccc
Confidence 45678899999987542 233455678899999999999999999999865421 123579999999864
No 282
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=99.18 E-value=4e-11 Score=71.08 Aligned_cols=67 Identities=15% Similarity=0.223 Sum_probs=50.8
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEET 70 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~ 70 (72)
+..+|..||+|++.... ........+.+|+.+|+.++||||+++++++.........+|+||||+.+
T Consensus 26 ~~~~~~~valK~~~~~~--~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~ 92 (334)
T cd07855 26 DTRSGKKVAIKKIPHAF--DVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVYVVMDLMES 92 (334)
T ss_pred EcCCCCEEEEEEecccc--ccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEEEEEehhhh
Confidence 45678999999987542 12234566788999999999999999999886543223478999999964
No 283
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.18 E-value=1.1e-10 Score=69.91 Aligned_cols=68 Identities=10% Similarity=0.105 Sum_probs=50.9
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCC--CCCeEEEEEEecCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHN--DKPRARFLGEYEETP 71 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~--~~~~~~lv~E~~~~G 71 (72)
|..++..||+|++.... ........+.+|+.+++.++||||+++++++..... ....+|+||||++++
T Consensus 45 ~~~~~~~vaiK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~~~~lv~e~~~~~ 114 (364)
T cd07875 45 DAILERNVAIKKLSRPF--QNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN 114 (364)
T ss_pred ECCCCcEEEEEEeCccc--cCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccCeEEEEEeCCCCC
Confidence 45678899999987532 223445678899999999999999999998865321 123579999999864
No 284
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=99.18 E-value=1.6e-10 Score=67.99 Aligned_cols=58 Identities=7% Similarity=0.144 Sum_probs=47.1
Q ss_pred eEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 7 VEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 7 ~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
..||+|.++.. ......+.+.+|+.+++.++||||+++++++... ..++++||+++|+
T Consensus 37 ~~vaiK~~~~~---~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-----~~~~v~e~~~~g~ 94 (316)
T cd05108 37 IPVAIKELREA---TSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-----TVQLITQLMPFGC 94 (316)
T ss_pred eeEEEEecccc---CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-----CceeeeecCCCCC
Confidence 34899998643 2334566788999999999999999999998764 5789999999985
No 285
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.18 E-value=8.7e-11 Score=68.12 Aligned_cols=65 Identities=11% Similarity=0.141 Sum_probs=50.5
Q ss_pred ccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcC-CCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 4 EEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 4 ~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
.++..||+|.++.............+.+|+.+++.+ +||||+++++.+... ..+|+||||+++|+
T Consensus 26 ~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~----~~~~lv~e~~~~~~ 91 (288)
T cd05583 26 DAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTD----TKLHLILDYVNGGE 91 (288)
T ss_pred cCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecC----CEEEEEEecCCCCc
Confidence 467889999987532111123456678999999999 699999999998776 47899999999875
No 286
>KOG0599|consensus
Probab=99.17 E-value=4.4e-11 Score=70.65 Aligned_cols=67 Identities=15% Similarity=0.181 Sum_probs=53.4
Q ss_pred CcccceEEEEEEEEeccccC----chHHHHHHHHHHHHHhcC-CCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKN----FKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~----~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+++||..+|+|+|....... ....++...+|+.||+++ .||||+++.++|+++ ..+++|+|+|+.|.
T Consensus 38 ~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~----sF~FlVFdl~prGE 109 (411)
T KOG0599|consen 38 HKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESD----AFVFLVFDLMPRGE 109 (411)
T ss_pred hcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCc----chhhhhhhhcccch
Confidence 56899999999998642111 122456778999999998 799999999999887 38899999999883
No 287
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.17 E-value=1.7e-10 Score=68.50 Aligned_cols=63 Identities=16% Similarity=0.202 Sum_probs=49.2
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEE 69 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~ 69 (72)
+..+|..||+|++.... ........+.+|+.+++.++||||++++++|.... ...|++|||+.
T Consensus 31 ~~~~~~~vaiK~~~~~~--~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~---~~~~lv~e~~~ 93 (328)
T cd07856 31 DQLTGQNVAIKKIMKPF--STPVLAKRTYRELKLLKHLRHENIISLSDIFISPL---EDIYFVTELLG 93 (328)
T ss_pred ECCCCCEEEEEEecccc--cccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCC---CcEEEEeehhc
Confidence 45678899999986532 12234566789999999999999999999987643 46899999984
No 288
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.17 E-value=1.7e-10 Score=66.51 Aligned_cols=62 Identities=10% Similarity=0.115 Sum_probs=46.9
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHH-HhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFEN-LTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEET 70 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~-l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~ 70 (72)
+..+|..||+|+++... .......+.+|+.+ ++.++||||+++++++... ..+|++|||++|
T Consensus 22 ~~~~~~~vaiK~~~~~~---~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~----~~~~lv~e~~~~ 84 (283)
T cd06617 22 HVPTGTIMAVKRIRATV---NSQEQKRLLMDLDISMRSVDCPYTVTFYGALFRE----GDVWICMEVMDT 84 (283)
T ss_pred EcCCCcEEEEEEEecCC---CcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecC----CcEEEEhhhhcc
Confidence 45679999999997642 22234456667765 6677999999999999876 479999999975
No 289
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=99.17 E-value=1.2e-10 Score=68.09 Aligned_cols=64 Identities=16% Similarity=0.270 Sum_probs=49.4
Q ss_pred cceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCC
Q psy8984 5 EGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETP 71 (72)
Q Consensus 5 ~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~G 71 (72)
+|..||+|.+..... ........+.+|+.+++.++||||+++++++.+.. ...+|+||||+.++
T Consensus 26 ~~~~~alK~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~~~lv~e~~~~~ 89 (316)
T cd07842 26 DGKEYAIKKFKGDKE-QYTGISQSACREIALLRELKHENVVSLVEVFLEHA--DKSVYLLFDYAEHD 89 (316)
T ss_pred CCCeEEEEEeccccc-cccCccHHHHHHHHHHHhcCCCCccceEEEEeCCC--CceEEEEEeCCCcC
Confidence 688999999986321 11223456788999999999999999999998752 24799999999753
No 290
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=99.16 E-value=1.6e-10 Score=66.13 Aligned_cols=58 Identities=19% Similarity=0.252 Sum_probs=47.2
Q ss_pred cceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 5 EGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 5 ~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
++..||+|.+.... .....+.+|+.+++.++||||+++++++... ..|++|||+.+|+
T Consensus 29 ~~~~~a~K~~~~~~-----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-----~~~~v~e~~~~~~ 86 (260)
T cd05067 29 GHTKVAIKSLKQGS-----MSPEAFLAEANLMKQLQHPRLVRLYAVVTQE-----PIYIITEYMENGS 86 (260)
T ss_pred CCceEEEEEecCCC-----CcHHHHHHHHHHHHhcCCcCeeeEEEEEccC-----CcEEEEEcCCCCC
Confidence 56789999987532 2245688999999999999999999987543 6899999999885
No 291
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=99.16 E-value=3.7e-10 Score=65.56 Aligned_cols=65 Identities=18% Similarity=0.252 Sum_probs=49.7
Q ss_pred cccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcC-CCcceeeeeeeeeeCCC-CCCeEEEEEEecCCCC
Q psy8984 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHN-DKPRARFLGEYEETPT 72 (72)
Q Consensus 3 ~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~-~~~~~~lv~E~~~~Gs 72 (72)
..+|..+|+|.+... ......+.+|+.+++++ +||||+++++++...+. .....|+||||+++|+
T Consensus 44 ~~~~~~~aik~~~~~-----~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~~~lv~ey~~~~s 110 (291)
T cd06639 44 KKDGSLAAVKILDPI-----SDVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQLWLVLELCNGGS 110 (291)
T ss_pred CCCCCEEEEEEeccc-----ccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCCeeEEEEEECCCCc
Confidence 467889999988643 12345678899999998 89999999999875421 1236899999999885
No 292
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.16 E-value=8.8e-11 Score=67.80 Aligned_cols=63 Identities=17% Similarity=0.245 Sum_probs=50.3
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEET 70 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~ 70 (72)
++.+|..||+|++.... ........+.+|+.+++.++||||+++++++.+. ...|++|||+++
T Consensus 20 ~~~~~~~~~ik~~~~~~--~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~----~~~~iv~e~~~~ 82 (283)
T cd07835 20 DKLTGEIVALKKIRLET--EDEGVPSTAIREISLLKELNHPNIVRLLDVVHSE----NKLYLVFEFLDL 82 (283)
T ss_pred EcCCCCEEEEEEeeccc--ccccchhHHHHHHHHHHhcCCCCccCHhheeccC----CeEEEEEeccCc
Confidence 34678999999998642 1223345678899999999999999999999876 489999999853
No 293
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=99.16 E-value=1.9e-10 Score=65.75 Aligned_cols=59 Identities=17% Similarity=0.249 Sum_probs=46.9
Q ss_pred cceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 5 EGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 5 ~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
++..+|+|.+.... .....+.+|+.+++.++||||+++++++.+. ...|+||||++||+
T Consensus 27 ~~~~~~iK~~~~~~-----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~----~~~~lv~e~~~~~~ 85 (256)
T cd05059 27 GKIDVAIKMIREGA-----MSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQ----RPIFIVTEYMANGC 85 (256)
T ss_pred CCccEEEEEeccCC-----CCHHHHHHHHHHHHhCCCCCEEEEEEEEcCC----CceEEEEecCCCCC
Confidence 34578999876432 1234578899999999999999999998766 37899999999875
No 294
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=99.16 E-value=2.1e-10 Score=65.55 Aligned_cols=59 Identities=14% Similarity=0.176 Sum_probs=47.9
Q ss_pred cceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 5 EGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 5 ~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
++..||+|.+.... .....+.+|+.+++.++||||+++++++.+. ...+++|||+++|+
T Consensus 29 ~~~~~~vK~~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----~~~~~v~e~~~~~~ 87 (261)
T cd05034 29 GTTKVAVKTLKPGT-----MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEE----EPIYIVTEYMSKGS 87 (261)
T ss_pred CCceEEEEEecCCc-----cCHHHHHHHHHHHhhCCCCCEeeeeeeeecC----CceEEEEeccCCCC
Confidence 34678999887532 2345688999999999999999999998775 37899999999875
No 295
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.16 E-value=5.2e-11 Score=68.38 Aligned_cols=65 Identities=22% Similarity=0.230 Sum_probs=52.2
Q ss_pred cccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCC-CcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLE-HPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 3 ~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~-HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
..+|..||+|.+..... ........+.+|..+++.++ ||||+++++++.+. ..++++|||+.+|+
T Consensus 23 ~~~~~~~~ik~~~~~~~-~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~----~~~~lv~e~~~~~~ 88 (280)
T cd05581 23 KETNKEYAIKILDKRQL-IKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDE----ENLYFVLEYAPNGE 88 (280)
T ss_pred cCCCCEEEEEEechHhc-cchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCC----ceEEEEEcCCCCCc
Confidence 45789999999876422 12334567889999999998 99999999998776 48999999998875
No 296
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=99.16 E-value=4e-10 Score=65.12 Aligned_cols=58 Identities=9% Similarity=0.172 Sum_probs=47.6
Q ss_pred eEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 7 VEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 7 ~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
..+|+|.+... ........+.+|+.+++.++||||+++++++.+. ..+++|||+++|+
T Consensus 37 ~~~aik~~~~~---~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~v~e~~~~g~ 94 (279)
T cd05057 37 IPVAIKVLREE---TSPKANKEILDEAYVMASVDHPHVVRLLGICLSS-----QVQLITQLMPLGC 94 (279)
T ss_pred eEEEEEeccCC---CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecC-----ceEEEEecCCCCc
Confidence 36899987654 2234566788999999999999999999998773 6899999999885
No 297
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=99.15 E-value=1.7e-10 Score=67.69 Aligned_cols=59 Identities=14% Similarity=0.300 Sum_probs=46.3
Q ss_pred ccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCC
Q psy8984 4 EEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEET 70 (72)
Q Consensus 4 ~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~ 70 (72)
.++..||+|.+.... ....+.+|+.+|+.++||||+++++++.+.. ...+|++|||+.+
T Consensus 26 ~~~~~~aiK~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~~~lv~e~~~~ 84 (317)
T cd07868 26 KDDRDYALKQIEGTG------ISMSACREIALLRELKHPNVISLQKVFLSHA--DRKVWLLFDYAEH 84 (317)
T ss_pred CCCceEEEEEECCCC------CcHHHHHHHHHHHhcCCCCCcceeeeEecCC--CcEEEEEEeccCC
Confidence 467889999886431 1234678999999999999999999986542 2468999999865
No 298
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.15 E-value=2.9e-10 Score=67.39 Aligned_cols=60 Identities=17% Similarity=0.157 Sum_probs=48.4
Q ss_pred ceEEEEEEEEeccccCchHHHHHHHHHHHHHhcC-CCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 6 GVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 6 g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..||+|.+... ........+.+|+.+++++ +||||+++++++.+. ..+|++|||+++|+
T Consensus 44 ~~~vaiK~~~~~---~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~----~~~~lv~e~~~~g~ 104 (334)
T cd05100 44 PVTVAVKMLKDD---ATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD----GPLYVLVEYASKGN 104 (334)
T ss_pred ceeEEEEEcccc---cCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccC----CceEEEEecCCCCc
Confidence 346899987643 2234567789999999999 899999999998776 37899999999885
No 299
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=99.15 E-value=3.2e-10 Score=66.46 Aligned_cols=60 Identities=15% Similarity=0.294 Sum_probs=46.5
Q ss_pred ccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCC
Q psy8984 4 EEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETP 71 (72)
Q Consensus 4 ~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~G 71 (72)
.++..||+|.+.... ....+.+|+.+|+.++||||+++++++.... ...+|++|||+.++
T Consensus 26 ~~~~~~a~k~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~~~lv~e~~~~~ 85 (317)
T cd07867 26 KDEKEYALKQIEGTG------ISMSACREIALLRELKHPNVIALQKVFLSHS--DRKVWLLFDYAEHD 85 (317)
T ss_pred CccceEEEEEecCCC------CcHHHHHHHHHHHhCCCCCeeeEEEEEeccC--CCeEEEEEeeeCCc
Confidence 456789999886431 1235678999999999999999999986532 24789999998753
No 300
>KOG0199|consensus
Probab=99.15 E-value=3.4e-11 Score=77.75 Aligned_cols=58 Identities=16% Similarity=0.181 Sum_probs=49.6
Q ss_pred eEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 7 VEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 7 ~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
..||+|+++.... ......|+||+.+|.+|+|||+|+|||+..+. .+-||||+|+.||
T Consensus 139 V~VAVKclr~d~l---~~~mddflrEas~M~~L~H~hliRLyGvVl~q-----p~mMV~ELaplGS 196 (1039)
T KOG0199|consen 139 VNVAVKCLRDDSL---NAIMDDFLREASHMLKLQHPHLIRLYGVVLDQ-----PAMMVFELAPLGS 196 (1039)
T ss_pred EeEEEEeccCCcc---chhHHHHHHHHHHHHhccCcceeEEeeeeccc-----hhhHHhhhcccch
Confidence 3699999986421 23678899999999999999999999999885 5889999999996
No 301
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=99.15 E-value=2.1e-10 Score=65.42 Aligned_cols=58 Identities=14% Similarity=0.162 Sum_probs=47.6
Q ss_pred ccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 4 EEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 4 ~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
.+|..||+|.++.. .....+.+|+.+++.++||||+++++++... ..+++|||+.+|+
T Consensus 27 ~~~~~~~iK~~~~~------~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-----~~~~v~e~~~~~~ 84 (254)
T cd05083 27 YTGQKVAVKNIKCD------VTAQAFLEETAVMTKLHHKNLVRLLGVILHN-----GLYIVMELMSKGN 84 (254)
T ss_pred cCCCceEEEeecCc------chHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-----CcEEEEECCCCCC
Confidence 46778999988643 1235688999999999999999999998654 5799999999875
No 302
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.15 E-value=2.5e-10 Score=67.58 Aligned_cols=65 Identities=15% Similarity=0.159 Sum_probs=49.0
Q ss_pred CcccceEEEEEEEEeccccCch----------HHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFK----------AQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEET 70 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~----------~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~ 70 (72)
|..+|..||+|.++........ .....+.+|+++++.++||||+++++++... ..++++|||+.+
T Consensus 30 ~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----~~~~lv~e~~~~ 104 (335)
T PTZ00024 30 DTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDVYVEG----DFINLVMDIMAS 104 (335)
T ss_pred ECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEEEecC----CcEEEEEecccc
Confidence 4567889999998754211100 0112467899999999999999999999876 478999999975
No 303
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=99.14 E-value=5.1e-10 Score=64.69 Aligned_cols=65 Identities=14% Similarity=0.224 Sum_probs=49.9
Q ss_pred cccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcC-CCcceeeeeeeeeeCCC--CCCeEEEEEEecCCCC
Q psy8984 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHN--DKPRARFLGEYEETPT 72 (72)
Q Consensus 3 ~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~--~~~~~~lv~E~~~~Gs 72 (72)
..++..+|+|.+... ......+.+|+.+++.+ +||||+++++++....+ ....+|++|||+.+|+
T Consensus 38 ~~~~~~~a~K~~~~~-----~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~ 105 (282)
T cd06636 38 VKTGQLAAIKVMDVT-----EDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGS 105 (282)
T ss_pred cCCCcEEEEEEEecC-----hHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCEEEEEEEeCCCCc
Confidence 457889999988653 23445688899999988 79999999999864321 1247899999999875
No 304
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=99.14 E-value=3.7e-10 Score=64.51 Aligned_cols=59 Identities=19% Similarity=0.220 Sum_probs=47.1
Q ss_pred cceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 5 EGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 5 ~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
.|..||+|.++.. ...+.+.+|+.+++.++||||+++++++.... ...|++|||+++|+
T Consensus 28 ~~~~~~~k~~~~~------~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~---~~~~lv~e~~~~~~ 86 (256)
T cd05082 28 RGNKVAVKCIKND------ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEK---GGLYIVTEYMAKGS 86 (256)
T ss_pred cCCcEEEEEeCCC------chHHHHHHHHHHHHhCCCCCeeeEEEEEEcCC---CceEEEEECCCCCc
Confidence 4677899987542 22456889999999999999999999875543 47899999999875
No 305
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=99.13 E-value=7.1e-10 Score=62.45 Aligned_cols=62 Identities=24% Similarity=0.365 Sum_probs=51.8
Q ss_pred cccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 3 ~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
..+|..+|+|++.... ......+.+|+.+++.++||||+++++.+... ...++++||+++++
T Consensus 22 ~~~~~~~~~k~~~~~~----~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~----~~~~l~~e~~~~~~ 83 (253)
T cd05122 22 KRTGKEVAIKVIKLES----KEKKEKIINEIQILKKCKHPNIVKYYGSYLKK----DELWIVMEFCSGGS 83 (253)
T ss_pred CCCCcEEEEEEecccc----hhHHHHHHHHHHHHHhCCCCCEeEEEEEEecC----CeEEEEEecCCCCc
Confidence 3568899999997642 23567889999999999999999999998876 47899999999875
No 306
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=99.13 E-value=6.2e-11 Score=67.87 Aligned_cols=58 Identities=17% Similarity=0.166 Sum_probs=46.4
Q ss_pred eEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 7 VEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 7 ~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
..+|+|.+... .....+.+.+|+.+++.++||||+++++++.... ..++||||+++|+
T Consensus 28 ~~~~~k~~~~~----~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~----~~~lv~e~~~~g~ 85 (258)
T cd05078 28 TEVLLKVLDKS----HRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGD----ESIMVQEYVKFGS 85 (258)
T ss_pred chhhHHhhcch----hHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCC----CcEEEEecCCCCc
Confidence 34777777542 2234567888999999999999999999998763 7899999999985
No 307
>PHA03212 serine/threonine kinase US3; Provisional
Probab=99.13 E-value=1.5e-10 Score=70.41 Aligned_cols=55 Identities=18% Similarity=0.142 Sum_probs=45.2
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEET 70 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~ 70 (72)
|..++..||+|.... ..+.+|+++|+.++||||++++++|... ...+++||++.+
T Consensus 113 d~~~~~~vaiK~~~~----------~~~~~E~~il~~l~HpnIv~~~~~~~~~----~~~~lv~e~~~~ 167 (391)
T PHA03212 113 DNKTCEHVVIKAGQR----------GGTATEAHILRAINHPSIIQLKGTFTYN----KFTCLILPRYKT 167 (391)
T ss_pred ECCCCCEEEEechhh----------hhhHHHHHHHHhCCCCCCCCEeEEEEEC----CeeEEEEecCCC
Confidence 567888899986432 2367899999999999999999999876 378999999864
No 308
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=99.12 E-value=5.4e-10 Score=69.88 Aligned_cols=69 Identities=14% Similarity=0.146 Sum_probs=52.5
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCC----CCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHND----KPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~----~~~~~lv~E~~~~Gs 72 (72)
+..+|..||+|.+.... ........+.+|+.+|..++||||+++++.+....+. ...+++||||+++|+
T Consensus 53 ~~~~g~~vAvK~i~~~~--~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~~~~~i~lV~Ey~~~gs 125 (496)
T PTZ00283 53 RVSDGEPFAVKVVDMEG--MSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPENVLMIALVLDYANAGD 125 (496)
T ss_pred EcCCCCEEEEEEEeccc--CCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcccceEEEEEEeCCCCCc
Confidence 35678999999998653 2345566788999999999999999999887543210 113789999999985
No 309
>KOG0579|consensus
Probab=99.12 E-value=1.2e-11 Score=79.51 Aligned_cols=63 Identities=17% Similarity=0.142 Sum_probs=52.9
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+++++...|-|.|... +....+.+.-||+||+.++||+||+|++.|+.+ +.+||+.|||.||.
T Consensus 53 nket~~lAAaKvIetk----seEELEDylVEIeILa~CdHP~ivkLl~ayy~e----nkLwiliEFC~GGA 115 (1187)
T KOG0579|consen 53 NKETKLLAAAKVIETK----SEEELEDYLVEIEILAECDHPVIVKLLSAYYFE----NKLWILIEFCGGGA 115 (1187)
T ss_pred cccchhhhhhhhhccc----chhHHhhhhhhhhhhhcCCChHHHHHHHHHhcc----CceEEEEeecCCch
Confidence 3566777788888653 456788899999999999999999999988876 48999999999983
No 310
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=99.11 E-value=3.7e-10 Score=64.36 Aligned_cols=58 Identities=17% Similarity=0.229 Sum_probs=47.2
Q ss_pred ceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 6 GVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 6 g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..+|+|.+.... .....+.+|+++++.++||||+++++++... ..++++|||+++|+
T Consensus 28 ~~~~~~k~~~~~~-----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~----~~~~~v~e~~~~~~ 85 (256)
T cd05112 28 KRKVAIKTIREGA-----MSEEDFIEEAQVMMKLSHPKLVQLYGVCTER----SPICLVFEFMEHGC 85 (256)
T ss_pred CCeEEEEECCCCC-----CCHHHHHHHHHHHHhCCCCCeeeEEEEEccC----CceEEEEEcCCCCc
Confidence 5679999876432 1234688999999999999999999998776 37899999999875
No 311
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=99.11 E-value=2.9e-10 Score=65.33 Aligned_cols=56 Identities=14% Similarity=0.195 Sum_probs=45.0
Q ss_pred eEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 7 VEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 7 ~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
..||+|.++... .....+.+|+++++.++||||+++++.+... ..|++|||+++|+
T Consensus 31 ~~valK~~~~~~-----~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~-----~~~lv~e~~~~~~ 86 (262)
T cd05071 31 TRVAIKTLKPGT-----MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE-----PIYIVTEYMSKGS 86 (262)
T ss_pred ceEEEEecccCc-----cCHHHHHHHHHHHHhCCCCCcceEEEEECCC-----CcEEEEEcCCCCc
Confidence 459999987532 1235688999999999999999999987543 5799999999985
No 312
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=99.11 E-value=3.6e-10 Score=64.65 Aligned_cols=58 Identities=12% Similarity=0.178 Sum_probs=46.4
Q ss_pred cceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 5 EGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 5 ~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
++..+|+|.+.... .....+.+|+.+++.++||||+++++++... ..|++|||+++|+
T Consensus 29 ~~~~~~~k~~~~~~-----~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~-----~~~lv~e~~~~~~ 86 (260)
T cd05070 29 GNTKVAVKTLKPGT-----MSPESFLEEAQIMKKLRHDKLVQLYAVVSEE-----PIYIVTEYMSKGS 86 (260)
T ss_pred CCceeEEEEecCCC-----CCHHHHHHHHHHHHhcCCCceEEEEeEECCC-----CcEEEEEecCCCc
Confidence 45679999887532 1235688999999999999999999987543 5899999999875
No 313
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=99.11 E-value=1.2e-09 Score=62.68 Aligned_cols=67 Identities=10% Similarity=0.096 Sum_probs=50.2
Q ss_pred ccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCC--CCeEEEEEEecCCCC
Q psy8984 4 EEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHND--KPRARFLGEYEETPT 72 (72)
Q Consensus 4 ~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~--~~~~~lv~E~~~~Gs 72 (72)
.+|..||+|.+.... ......+.+.+|+.+++.++||||+++++++...... ....++++||+.+|+
T Consensus 25 ~~~~~~aiK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (273)
T cd05074 25 GSFQKVAVKMLKADI--FSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLPIPMVILPFMKHGD 93 (273)
T ss_pred CCceEEEEEEecccc--CChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcccceEEEEecCCCCc
Confidence 467899999987542 2334567788999999999999999999988654211 113478899998875
No 314
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.11 E-value=3.7e-10 Score=65.81 Aligned_cols=67 Identities=15% Similarity=0.100 Sum_probs=49.2
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCC----CCCeEEEEEEecCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHN----DKPRARFLGEYEET 70 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~----~~~~~~lv~E~~~~ 70 (72)
+..+|..||+|.+..... .......+.+|+.++++++||||+++++++.+... .....|+||||+.+
T Consensus 33 ~~~~~~~~aik~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~~ 103 (310)
T cd07865 33 HKKTKQIVALKKVLMENE--KEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYKGSFYLVFEFCEH 103 (310)
T ss_pred ECCCCcEEEEEEEeccCC--cCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCCceEEEEEcCCCc
Confidence 346789999999875421 12233456789999999999999999999876431 12357999999975
No 315
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=99.11 E-value=7.6e-10 Score=63.90 Aligned_cols=62 Identities=19% Similarity=0.050 Sum_probs=49.6
Q ss_pred cceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 5 EGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 5 ~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
++..||+|.+... ........+.+|+.+++.++||||+++++++.... ...++++||+++|+
T Consensus 34 ~~~~v~~k~~~~~---~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~---~~~~~~~~~~~~~~ 95 (280)
T cd05043 34 KEEEVFVKTVKDH---ASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDG---EPPFVLYPYMNWGN 95 (280)
T ss_pred ceeEEEEEEccCC---CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCC---CCCEEEEEcCCCCc
Confidence 3678999988643 23455677899999999999999999999877643 46899999999875
No 316
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.10 E-value=5.6e-10 Score=66.68 Aligned_cols=67 Identities=13% Similarity=0.170 Sum_probs=49.8
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCC--CCCeEEEEEEecCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHN--DKPRARFLGEYEET 70 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~--~~~~~~lv~E~~~~ 70 (72)
+..+|..||+|.+.... ........+.+|+.+++.++||||++++++|..... .....|+||||+.+
T Consensus 37 ~~~~~~~vaiK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~~ 105 (353)
T cd07850 37 DTVTGQNVAIKKLSRPF--QNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQDVYLVMELMDA 105 (353)
T ss_pred ECCCCCEEEEEecCccc--cChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccCcEEEEEeccCC
Confidence 45688999999986531 123344567789999999999999999999865421 11357999999975
No 317
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.10 E-value=2.8e-10 Score=66.08 Aligned_cols=67 Identities=18% Similarity=0.175 Sum_probs=49.6
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcC-CCcceeeeeeeeeeCCC-CCCeEEEEEEecCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHN-DKPRARFLGEYEET 70 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~-~~~~~~lv~E~~~~ 70 (72)
+..+|..||+|.+.... ........+.+|+.+++.+ +||||+++++++...+. +...+|++|||+++
T Consensus 22 ~~~~~~~v~lK~~~~~~--~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~ 90 (295)
T cd07837 22 DKNTGKLVALKKTRLEM--DEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSLYLVFEYLDS 90 (295)
T ss_pred ECCCCcEEEEEeehhhc--cccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceEEEEeeccCc
Confidence 35678999999987642 1222345688899999999 56999999999876531 22348999999986
No 318
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.10 E-value=3.7e-10 Score=66.96 Aligned_cols=65 Identities=22% Similarity=0.221 Sum_probs=49.1
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcC-CCcceeeeeeeeeeCCCCCCeEEEEEEecCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHNDKPRARFLGEYEET 70 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~ 70 (72)
+..+|..+|+|++.... ........+.+|+.+++++ +||||+++++++...+ ...+|+||||+.+
T Consensus 28 ~~~~~~~~~vK~~~~~~--~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~--~~~~~lv~e~~~~ 93 (337)
T cd07852 28 DRRTKEVVALKKIFDAF--RNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAEN--DKDIYLVFEYMET 93 (337)
T ss_pred EcCCCeEEEEEeecccc--CcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCC--CceEEEEeccccc
Confidence 35678899999986431 1223345677899999999 9999999999986542 2368999999974
No 319
>KOG0658|consensus
Probab=99.10 E-value=4.9e-11 Score=71.60 Aligned_cols=59 Identities=22% Similarity=0.371 Sum_probs=44.4
Q ss_pred cccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCC-CCeEEEEEEecC
Q psy8984 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHND-KPRARFLGEYEE 69 (72)
Q Consensus 3 ~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~-~~~~~lv~E~~~ 69 (72)
.++++.||||++-.+.+ --.||+++|+.++|||||+|..+|....+. .-.+.+|||||+
T Consensus 46 ~e~~~~vAIKKv~~d~r--------~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVleymP 105 (364)
T KOG0658|consen 46 RETEEEVAIKKVLQDKR--------YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLEYMP 105 (364)
T ss_pred cCCCceeEEEEecCCCC--------cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHHHhch
Confidence 35678999999865421 135799999999999999999998765422 124568999986
No 320
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.09 E-value=2.7e-10 Score=64.71 Aligned_cols=58 Identities=16% Similarity=0.158 Sum_probs=45.5
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
|+.+|..||+|.+.... ...+|...+....||||+++++++.+. ...|++|||++||+
T Consensus 14 ~~~~~~~~~~K~i~~~~---------~~~~~~~~~~~~~~~~i~~~~~~~~~~----~~~~lv~e~~~~~~ 71 (237)
T cd05576 14 DTRTQQTFILKGLRKSS---------EYSRERLTIIPHCVPNMVCLHKYIVSE----DSVFLVLQHAEGGK 71 (237)
T ss_pred EccCCcEEEEEeecchh---------hhhhHHHHHHhcCCCceeehhhheecC----CeEEEEEecCCCCC
Confidence 67789999999997531 123455555566799999999999876 48999999999985
No 321
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.08 E-value=8.5e-10 Score=63.93 Aligned_cols=62 Identities=11% Similarity=0.112 Sum_probs=49.7
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCC-CcceeeeeeeeeeCCCCCCeEEEEEEecCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLE-HPNIVKFHRYWTDTHNDKPRARFLGEYEET 70 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~-HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~ 70 (72)
+..+|..||+|.+.... .......+.+|+.++.++. ||||+++++++..+ ...+++|||+.+
T Consensus 25 ~~~~~~~~aiK~~~~~~---~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~----~~~~~~~e~~~~ 87 (288)
T cd06616 25 HKPSGTIMAVKRIRSTV---DEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFRE----GDCWICMELMDI 87 (288)
T ss_pred ECCCCCEEEEEEehhcc---ChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecC----CcEEEEEecccC
Confidence 45678899999987642 2345667889999999995 99999999998776 378999999864
No 322
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.08 E-value=7.6e-10 Score=63.74 Aligned_cols=64 Identities=20% Similarity=0.275 Sum_probs=50.4
Q ss_pred cccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCC
Q psy8984 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEET 70 (72)
Q Consensus 3 ~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~ 70 (72)
..+|..+|+|.+.... ........+.+|+.+++.++||||+++++++.+.. ....|+||||+++
T Consensus 21 ~~~~~~~~~K~~~~~~--~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~~~lv~e~~~~ 84 (287)
T cd07840 21 KKTGELVALKKIRMEN--EKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKG--KGSIYMVFEYMDH 84 (287)
T ss_pred CCCCeEEEEEEEeccc--ccccchHHHHHHHHHHHhccCCCeeeheeeEecCC--CCcEEEEeccccc
Confidence 4568899999998652 12234456889999999999999999999997751 1379999999974
No 323
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=99.08 E-value=7.3e-10 Score=63.47 Aligned_cols=58 Identities=16% Similarity=0.194 Sum_probs=46.6
Q ss_pred cceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 5 EGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 5 ~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
.+..+|+|.+... ......+.+|+.+++.++||||+++++++.+. ..|++|||+++|+
T Consensus 29 ~~~~~~iK~~~~~-----~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~~~v~e~~~~~~ 86 (260)
T cd05073 29 KHTKVAVKTMKPG-----SMSVEAFLAEANVMKTLQHDKLVKLHAVVTKE-----PIYIITEFMAKGS 86 (260)
T ss_pred CCccEEEEecCCC-----hhHHHHHHHHHHHHHhcCCCCcceEEEEEcCC-----CeEEEEEeCCCCc
Confidence 3456888887642 23456788999999999999999999998763 6899999999875
No 324
>KOG4645|consensus
Probab=99.08 E-value=3.4e-12 Score=85.62 Aligned_cols=65 Identities=18% Similarity=0.284 Sum_probs=54.9
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+.+||...|+|.|+.... .......+.+|..+|..++|||+|++||+-.+.+ .+||.||||.||+
T Consensus 1256 N~~tGellAvKEI~iq~~--~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRe----kv~IFMEyC~~Gs 1320 (1509)
T KOG4645|consen 1256 NLDTGELLAVKEIKIQDS--DHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHRE----KVYIFMEYCEGGS 1320 (1509)
T ss_pred cCCccchhhhhhhhcCcc--ccccCcchHHHHHHHHhccCccccccCceeecHH----HHHHHHHHhccCc
Confidence 568999999999987642 2345567889999999999999999999977653 7999999999996
No 325
>PRK10345 hypothetical protein; Provisional
Probab=99.07 E-value=8.6e-10 Score=62.67 Aligned_cols=64 Identities=9% Similarity=0.173 Sum_probs=44.9
Q ss_pred cccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcC-----CCcceeeeeeeeeeCCCCCCeEE-EEEEe--cCCCC
Q psy8984 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-----EHPNIVKFHRYWTDTHNDKPRAR-FLGEY--EETPT 72 (72)
Q Consensus 3 ~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l-----~HpnIv~l~~~~~~~~~~~~~~~-lv~E~--~~~Gs 72 (72)
+.++.. +||++.... ......+.+|+.+++.+ +||||+++++++++... ...++ +|||| +.+||
T Consensus 22 p~~~~k-~IKv~~~~~----~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g-~g~v~~~I~e~~G~~~~t 93 (210)
T PRK10345 22 PEDAQR-CIKIVYHRG----DGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCG-TGYVYDVIADFDGKPSIT 93 (210)
T ss_pred CCCcCe-EEEEEeccc----cchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCC-CeEEEEEEecCCCCcchh
Confidence 445544 688887542 23456789999999999 57999999999987531 12334 78999 44564
No 326
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.07 E-value=7.6e-10 Score=66.02 Aligned_cols=65 Identities=11% Similarity=0.117 Sum_probs=48.4
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCC--CCeEEEEEEec
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHND--KPRARFLGEYE 68 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~--~~~~~lv~E~~ 68 (72)
+..+|..||+|++.... ........+.+|+.+|+.++||||+++++++...... ...+++||||+
T Consensus 36 ~~~~~~~vavK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~ 102 (343)
T cd07880 36 DRRTGAKVAIKKLYRPF--QSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRFHDFYLVMPFM 102 (343)
T ss_pred ECCCCcEEEEEEecccc--cchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccccceEEEEEecC
Confidence 45678899999986431 1233455688999999999999999999998764310 12468999998
No 327
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.07 E-value=1.7e-09 Score=62.83 Aligned_cols=66 Identities=11% Similarity=0.034 Sum_probs=45.9
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHH---HHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFE---NLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~---~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..+|..+|+|.+..... ..........+|.. ++...+||||+.+++.+.+. +..|+||||+++|+
T Consensus 15 ~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~----~~~~lv~e~~~~~~ 83 (279)
T cd05633 15 KADTGKMYAMKCLDKKRI-KMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTP----DKLCFILDLMNGGD 83 (279)
T ss_pred ECCCCcEEEEEEEEcccc-ccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecC----CeEEEEEecCCCCC
Confidence 356788999999876422 11222233344443 44455899999999999876 37999999999985
No 328
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=99.06 E-value=2.2e-09 Score=61.59 Aligned_cols=64 Identities=16% Similarity=0.231 Sum_probs=48.7
Q ss_pred cceEEEEEEEEecccc------CchHHHHHHHHHHHHHhc-CCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 5 EGVEVVWNEVQFSERK------NFKAQEEKIQQVFENLTQ-LEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 5 ~g~~vAiK~i~~~~~~------~~~~~~~~~~~Ei~~l~~-l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
++..+|+|.+...... ........+.+|+.++++ ++||||+++++++.+. ...+++|||++||+
T Consensus 25 ~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~----~~~~lv~e~~~~~~ 95 (269)
T cd08528 25 GQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLEN----DRLYIVMDLIEGAP 95 (269)
T ss_pred CCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccC----CeEEEEEecCCCCc
Confidence 5678999998753210 122345567789988875 7999999999999876 48999999999875
No 329
>KOG0604|consensus
Probab=99.06 E-value=1.9e-11 Score=72.65 Aligned_cols=62 Identities=13% Similarity=0.069 Sum_probs=47.1
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcC-CCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
++.||+.+|+|.+.- ..+..||+++.-.. .|||||+++++|+..-.+..++.+|||+|+||.
T Consensus 83 ~k~T~ekfALKvL~D---------s~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLiVmE~meGGe 145 (400)
T KOG0604|consen 83 HKRTQEKFALKVLLD---------SPKARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLIVMECMEGGE 145 (400)
T ss_pred eccchhhhHHHHHhc---------CHHHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEeeeecccchH
Confidence 456777777776642 24467898876554 799999999999765445678999999999984
No 330
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.05 E-value=9.1e-10 Score=63.43 Aligned_cols=63 Identities=16% Similarity=0.159 Sum_probs=46.7
Q ss_pred cccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCC-CcceeeeeeeeeeCCCCCCeEEEEEEecCC
Q psy8984 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLE-HPNIVKFHRYWTDTHNDKPRARFLGEYEET 70 (72)
Q Consensus 3 ~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~-HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~ 70 (72)
..++..||+|+++... .........+|+.+++++. ||||+++++++.+.. ...+++||||+.+
T Consensus 21 ~~~~~~~aik~~~~~~---~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~--~~~~~lv~e~~~~ 84 (282)
T cd07831 21 RKTGKYYAIKCMKKHF---KSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRK--TGRLALVFELMDM 84 (282)
T ss_pred cCCCcEEEEEEehhcc---CCchhhhHHHHHHHHhhcCCCCCccceEEEEecCC--CCcEEEEEecCCc
Confidence 4578899999987531 1122233457999999885 999999999998752 1378999999975
No 331
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=99.05 E-value=8.7e-10 Score=63.15 Aligned_cols=56 Identities=13% Similarity=0.153 Sum_probs=44.5
Q ss_pred eEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 7 VEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 7 ~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
..+|+|.+.... ...+.+.+|+.+++.++||||+++++++... ..|++|||+.+|+
T Consensus 31 ~~~~lK~~~~~~-----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-----~~~~v~e~~~~~~ 86 (260)
T cd05069 31 TKVAIKTLKPGT-----MMPEAFLQEAQIMKKLRHDKLVPLYAVVSEE-----PIYIVTEFMGKGS 86 (260)
T ss_pred ceEEEEEcccCC-----ccHHHHHHHHHHHHhCCCCCeeeEEEEEcCC-----CcEEEEEcCCCCC
Confidence 468999876431 2345688999999999999999999987543 5789999999875
No 332
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.05 E-value=2.1e-09 Score=62.35 Aligned_cols=66 Identities=12% Similarity=0.103 Sum_probs=46.0
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHH---HHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQV---FENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~E---i~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+..+|+.||+|.+...... ..........| +.+++...||||+++++++.+.+ .+|+||||+.||+
T Consensus 15 ~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~----~~~~v~e~~~g~~ 83 (278)
T cd05606 15 KADTGKMYAMKCLDKKRIK-MKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPD----KLSFILDLMNGGD 83 (278)
T ss_pred EecCCCEEEEEEeeccccc-cchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCC----EEEEEEecCCCCc
Confidence 3467889999998764221 11111222333 44566678999999999998763 8999999999985
No 333
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=99.05 E-value=2.3e-09 Score=61.55 Aligned_cols=63 Identities=11% Similarity=0.195 Sum_probs=47.5
Q ss_pred EEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCC--CCCeEEEEEEecCCCC
Q psy8984 8 EVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHN--DKPRARFLGEYEETPT 72 (72)
Q Consensus 8 ~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~--~~~~~~lv~E~~~~Gs 72 (72)
.+|+|.++... ........+.+|+.+++.++||||+++++++..... .....+++|||+.+|+
T Consensus 28 ~~a~k~~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~ 92 (272)
T cd05075 28 KVAVKTMKIAI--CTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSPVVILPFMKHGD 92 (272)
T ss_pred eEEEEecccCc--CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCcEEEEEeCCCCc
Confidence 68999887542 234556788999999999999999999998754211 1125789999999885
No 334
>PTZ00036 glycogen synthase kinase; Provisional
Probab=99.04 E-value=9.7e-10 Score=67.78 Aligned_cols=62 Identities=13% Similarity=0.139 Sum_probs=45.2
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCC----CCCCeEEEEEEecCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTH----NDKPRARFLGEYEETP 71 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~----~~~~~~~lv~E~~~~G 71 (72)
+..+|..||+|++.... ....+|+.+|+.++|||||+++++|.... .....+++|||||+++
T Consensus 87 ~~~~~~~vAiK~i~~~~--------~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l~lvmE~~~~~ 152 (440)
T PTZ00036 87 CIDTSEKVAIKKVLQDP--------QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFLNVVMEFIPQT 152 (440)
T ss_pred ECCCCCEEEEEEEecCc--------chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceEEEEEEecCCcc
Confidence 34678899999886431 12457999999999999999999875421 0012467999999864
No 335
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.04 E-value=5.1e-10 Score=64.43 Aligned_cols=63 Identities=19% Similarity=0.273 Sum_probs=51.1
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEET 70 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~ 70 (72)
+..+|..+|+|++..... .......+.+|+.+++.++||||+++++++.+. ..++++|||+.+
T Consensus 20 ~~~~~~~~~ik~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~----~~~~~v~e~~~~ 82 (283)
T cd05118 20 DKLTGEIVAIKKIKLRFE--SEGIPKTALREIKLLKELNHPNIIKLLDVFRHK----GDLYLVFEFMDT 82 (283)
T ss_pred cCCCCcEEEEEEeccccc--cchhHHHHHHHHHHHHHhcCCCcchHHHhhccC----CCEEEEEeccCC
Confidence 446788999999876421 223456788999999999999999999998876 489999999975
No 336
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=99.03 E-value=1.6e-09 Score=63.30 Aligned_cols=58 Identities=16% Similarity=0.147 Sum_probs=46.1
Q ss_pred EEEEEEEEeccccCchHHHHHHHHHHHHHhcC-CCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 8 EVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 8 ~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
.+|+|.++.. ......+.+.+|+.+++++ +||||+++++++.+. ..+|++|||+++|+
T Consensus 31 ~~~ik~~~~~---~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~----~~~~lv~e~~~~~~ 89 (297)
T cd05089 31 NAAIKMLKEF---ASENDHRDFAGELEVLCKLGHHPNIINLLGACENR----GYLYIAIEYAPYGN 89 (297)
T ss_pred eeEEEEcccc---CCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccC----CcceEEEEecCCCc
Confidence 4688877632 2234456789999999999 799999999998776 37899999999875
No 337
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=99.02 E-value=6.6e-10 Score=66.05 Aligned_cols=66 Identities=11% Similarity=0.124 Sum_probs=48.2
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCC--CCCeEEEEEEecC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHN--DKPRARFLGEYEE 69 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~--~~~~~~lv~E~~~ 69 (72)
+..++..||+|.+.... ........+.+|+.+|+.++||||+++++++..... ....+|++||++.
T Consensus 36 ~~~~~~~vavK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (343)
T cd07878 36 DTRLRQKVAVKKLSRPF--QSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFNEVYLVTNLMG 103 (343)
T ss_pred ECCCCCEEEEEEeCchh--hhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccccCcEEEEeecCC
Confidence 45678899999987532 122334567799999999999999999998864321 1135799999883
No 338
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=99.02 E-value=2.6e-09 Score=61.94 Aligned_cols=57 Identities=12% Similarity=0.155 Sum_probs=43.9
Q ss_pred EEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 8 EVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 8 ~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
.+|+|.+... ........+..|+.++++++||||+++++++... ..++++||+++||
T Consensus 38 ~~~~k~~~~~---~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~~-----~~~~i~e~~~~gs 94 (279)
T cd05111 38 PVAIKTIQDR---SGRQTFQEITDHMLAMGSLDHAYIVRLLGICPGA-----SLQLVTQLSPLGS 94 (279)
T ss_pred EEEEeecccc---cchHHHHHHHHHHHHHhcCCCCCcceEEEEECCC-----ccEEEEEeCCCCc
Confidence 4777777532 1233456778889999999999999999987543 5789999999986
No 339
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=99.02 E-value=1.1e-09 Score=62.35 Aligned_cols=56 Identities=18% Similarity=0.187 Sum_probs=44.6
Q ss_pred eEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 7 VEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 7 ~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
..+|+|.+.... .....+.+|+.+++.++||||+++++++.. . ..++||||+++|+
T Consensus 31 ~~v~~k~~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~----~~~lv~e~~~~~~ 86 (259)
T cd05037 31 VSVVLKVLGSDH-----RDSLAFFETASLMSQLSHKHLVKLYGVCVR-D----ENIMVEEYVKFGP 86 (259)
T ss_pred eeeeeeccccch-----hhHHHHHHHHHHHHcCCCcchhheeeEEec-C----CcEEEEEcCCCCc
Confidence 357777765431 125778899999999999999999999877 3 5789999999985
No 340
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=99.01 E-value=1.5e-09 Score=62.89 Aligned_cols=67 Identities=18% Similarity=0.240 Sum_probs=46.4
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcC---CCcceeeeeeeeeeCCC-CCCeEEEEEEecCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL---EHPNIVKFHRYWTDTHN-DKPRARFLGEYEET 70 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l---~HpnIv~l~~~~~~~~~-~~~~~~lv~E~~~~ 70 (72)
++.+|..||+|.++.... .......+.+|+.+++.+ +||||+++++++.+... ....++++|||+.+
T Consensus 21 ~~~~~~~~aiK~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~~ 91 (288)
T cd07863 21 DPHSGHFVALKSVRVQTN--EDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETKVTLVFEHVDQ 91 (288)
T ss_pred ECCCCcEEEEEEeccCcC--CCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCceEEEEEccccc
Confidence 456899999999976421 112233456777776655 79999999999865321 12358999999975
No 341
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=99.01 E-value=3.5e-09 Score=61.20 Aligned_cols=57 Identities=5% Similarity=0.040 Sum_probs=46.7
Q ss_pred EEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 8 EVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 8 ~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
.||+|.++.. ........+.+|+.+++.++||||+++++++... ..+++|||+++|+
T Consensus 38 ~va~K~~~~~---~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-----~~~l~~~~~~~g~ 94 (279)
T cd05109 38 PVAIKVLREN---TSPKANKEILDEAYVMAGVGSPYVCRLLGICLTS-----TVQLVTQLMPYGC 94 (279)
T ss_pred EEEEEEecCC---CCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC-----CcEEEEEcCCCCC
Confidence 5899988653 2344566788999999999999999999998764 5789999999885
No 342
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.00 E-value=1.4e-09 Score=64.62 Aligned_cols=66 Identities=17% Similarity=0.166 Sum_probs=49.4
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCC-CCCeEEEEEEecCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHN-DKPRARFLGEYEET 70 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~-~~~~~~lv~E~~~~ 70 (72)
+..+|..||+|++.... .......+.+|+.+++.++||||+++++++..... ....+|+++||+.+
T Consensus 26 ~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~ 92 (336)
T cd07849 26 HKPTGVKVAIKKISPFE---HQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDVYIVQELMET 92 (336)
T ss_pred EcCCCCeEEEEEecccc---cchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceEEEEehhccc
Confidence 45688999999986431 22345667889999999999999999998765421 12358999999964
No 343
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=98.99 E-value=5.5e-10 Score=64.44 Aligned_cols=62 Identities=24% Similarity=0.326 Sum_probs=47.7
Q ss_pred cccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCC-CcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLE-HPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 3 ~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~-HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
..++..||+|++.... .........+|+..++.++ ||||+++++++.+. ...|+||||+ +|+
T Consensus 21 ~~~~~~~~ik~~~~~~---~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~----~~~~lv~e~~-~~~ 83 (283)
T cd07830 21 KETGELVAIKKMKKKF---YSWEECMNLREVKSLRKLNEHPNIVKLKEVFREN----DELYFVFEYM-EGN 83 (283)
T ss_pred CCCCcEEEEEEehhhc---cchhHHHHHHHHHHHHhccCCCCchhHHHHhhcC----CcEEEEEecC-CCC
Confidence 3567889999987542 1122334567999999998 99999999999886 4899999999 553
No 344
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=98.99 E-value=1e-09 Score=65.35 Aligned_cols=65 Identities=20% Similarity=0.282 Sum_probs=49.5
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCC----------CCeEEEEEEecCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHND----------KPRARFLGEYEET 70 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~----------~~~~~lv~E~~~~ 70 (72)
++.+|..||+|++.... ......+.+|+++++.++||||+++++++.+.... ...+|+||||+.+
T Consensus 26 ~~~~~~~v~iK~i~~~~----~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~ 100 (342)
T cd07854 26 DSDCDKRVAVKKIVLTD----PQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGSLTELNSVYIVQEYMET 100 (342)
T ss_pred ECCCCcEEEEEEEecCC----CchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccccccccceEEEEeecccc
Confidence 45788999999997642 23456688999999999999999999887653210 1257999999974
No 345
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=98.98 E-value=1.5e-09 Score=63.30 Aligned_cols=67 Identities=13% Similarity=0.225 Sum_probs=48.9
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCC----CCeEEEEEEecCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHND----KPRARFLGEYEET 70 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~----~~~~~lv~E~~~~ 70 (72)
+..+|..+|+|++..... .......+.+|+++++.++||||+++++++.+.... ...+|++|||+.+
T Consensus 29 ~~~~~~~~~ik~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~ 99 (311)
T cd07866 29 QIKTGRVVALKKILMHNE--KDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRKRGSVYMVTPYMDH 99 (311)
T ss_pred ECCCCcEEEEEEEEeccC--CCCcchhHHHHHHHHHhcCCCCccchhhheecccccccccCceEEEEEecCCc
Confidence 345788999999876421 112234567899999999999999999987654311 2357999999875
No 346
>KOG0690|consensus
Probab=98.98 E-value=2.2e-10 Score=69.15 Aligned_cols=66 Identities=14% Similarity=0.109 Sum_probs=55.6
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
.+.||+.||+|+++++-. ...+.....+.|-++|+..+||.+..|...|...+ .+++||||++||.
T Consensus 189 EKat~k~YAiKIlkKevi-iakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~d----rlCFVMeyanGGe 254 (516)
T KOG0690|consen 189 EKATGKLYAIKILKKEVI-IAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQD----RLCFVMEYANGGE 254 (516)
T ss_pred ecccCceeehhhhhhhhe-eehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCc----eEEEEEEEccCce
Confidence 357899999999987632 34556667788999999999999999999998874 8999999999984
No 347
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=98.98 E-value=1.3e-09 Score=64.82 Aligned_cols=67 Identities=13% Similarity=0.207 Sum_probs=49.0
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCC-CCCeEEEEEEecCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHN-DKPRARFLGEYEET 70 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~-~~~~~~lv~E~~~~ 70 (72)
+..+|..||+|.+.... ........+.+|+.+++.++||||+++++++..... ....+|++|||+.+
T Consensus 26 ~~~~~~~vaiK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~~ 93 (337)
T cd07858 26 NSETNEKVAIKKIANAF--DNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDVYIVYELMDT 93 (337)
T ss_pred ecCCCCeEEEEEecccc--cccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcEEEEEeCCCC
Confidence 45688999999987531 122234567789999999999999999998865420 11248999999964
No 348
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=98.97 E-value=2.7e-09 Score=62.52 Aligned_cols=57 Identities=7% Similarity=0.083 Sum_probs=44.9
Q ss_pred EEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 8 EVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 8 ~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
.||+|.+... ........+.+|+.+++.++||||+++++++... ..++++||+++|+
T Consensus 38 ~vaiK~~~~~---~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-----~~~~v~e~~~~g~ 94 (303)
T cd05110 38 PVAIKILNET---TGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-----TIQLVTQLMPHGC 94 (303)
T ss_pred eEEEEecccc---CCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-----CceeeehhcCCCC
Confidence 5788887643 2233445688999999999999999999998664 4678999999885
No 349
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=98.95 E-value=6.4e-09 Score=60.34 Aligned_cols=64 Identities=19% Similarity=0.222 Sum_probs=43.9
Q ss_pred cceEEEEEEEEeccccCchHHHHHHHHHHHHHhcC---CCcceeeeeeeeeeCC-CCCCeEEEEEEecCC
Q psy8984 5 EGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL---EHPNIVKFHRYWTDTH-NDKPRARFLGEYEET 70 (72)
Q Consensus 5 ~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l---~HpnIv~l~~~~~~~~-~~~~~~~lv~E~~~~ 70 (72)
+|..||+|.++.... .......+.+|+.+++.+ +||||+++++++.... .....+++||||+++
T Consensus 26 ~~~~vavK~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~ 93 (290)
T cd07862 26 GGRFVALKRVRVQTG--EEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ 93 (290)
T ss_pred CCeEEEEEEEecccC--CCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCCCcEEEEEccCCC
Confidence 468899999876421 222334566787776655 6999999999885321 112468999999975
No 350
>PHA03207 serine/threonine kinase US3; Provisional
Probab=98.95 E-value=3.1e-09 Score=64.54 Aligned_cols=54 Identities=11% Similarity=0.098 Sum_probs=43.6
Q ss_pred ccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCC
Q psy8984 4 EEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEET 70 (72)
Q Consensus 4 ~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~ 70 (72)
.++..||+|.+... ....+|+.+|+.++||||+++++++... ..+|++||++.+
T Consensus 117 ~~~~~v~vK~~~~~---------~~~~~E~~il~~l~h~~iv~~~~~~~~~----~~~~lv~e~~~~ 170 (392)
T PHA03207 117 EQRKKVIVKAVTGG---------KTPGREIDILKTISHRAIINLIHAYRWK----STVCMVMPKYKC 170 (392)
T ss_pred ccceeEEEEecccc---------ccHHHHHHHHHhcCCCCccceeeeEeeC----CEEEEEehhcCC
Confidence 45677888877532 1246899999999999999999999876 489999999864
No 351
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=98.93 E-value=5e-09 Score=62.57 Aligned_cols=65 Identities=12% Similarity=0.205 Sum_probs=47.4
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCC--CCCeEEEEEEec
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHN--DKPRARFLGEYE 68 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~--~~~~~~lv~E~~ 68 (72)
+..+|..||+|++.... ........+.+|+.++++++||||+++++++..... ....+|++++++
T Consensus 38 ~~~~~~~vaiK~~~~~~--~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~~~~ 104 (345)
T cd07877 38 DTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM 104 (345)
T ss_pred EcCCCeEEEEEEecCcc--hhhHHHHHHHHHHHHHHHcCCCcccceeeeeeecccccccccEEEEehhc
Confidence 45678999999987531 122334567889999999999999999998865321 113478888887
No 352
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=98.93 E-value=2.8e-09 Score=59.58 Aligned_cols=63 Identities=24% Similarity=0.362 Sum_probs=51.2
Q ss_pred cccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 3 ~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
..+|..+|+|.+..... ......+.+|++.++.++||||+++++++... ...++++||+.+|+
T Consensus 11 ~~~~~~~~~k~~~~~~~---~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~----~~~~l~~e~~~~~~ 73 (244)
T smart00220 11 KKTGKLVAIKVIKKEKI---KKKRERILREISILKKLKHPNIVRLYDVFEDE----DKLYLVMEYCDGGD 73 (244)
T ss_pred CCCCcEEEEEEeccccc---ccHHHHHHHHHHHHHhCCCCcHHHHHhheeeC----CEEEEEEeCCCCCC
Confidence 34688999999876421 11157889999999999999999999998876 37899999998864
No 353
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=98.92 E-value=5.6e-09 Score=60.91 Aligned_cols=61 Identities=16% Similarity=0.198 Sum_probs=46.9
Q ss_pred cccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcC-CCcceeeeeeeeeeCCCCCCeEEEEEEecCC
Q psy8984 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHNDKPRARFLGEYEET 70 (72)
Q Consensus 3 ~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~ 70 (72)
..+|..||+|.++... .......+.+|+.++..+ .||||+++++++.+. ..+|++|||+.+
T Consensus 37 ~~~~~~~avK~~~~~~---~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~----~~~~~v~e~~~~ 98 (296)
T cd06618 37 KKTGHVMAVKQMRRTG---NKEENKRILMDLDVVLKSHDCPYIVKCYGYFITD----SDVFICMELMST 98 (296)
T ss_pred CCCCeEEEEEEEeccC---ChHHHHHHHHHHHHHHhccCCCchHhhheeeecC----CeEEEEeeccCc
Confidence 3468899999997642 233455677788777666 599999999999876 489999999864
No 354
>KOG0200|consensus
Probab=98.92 E-value=3.9e-09 Score=67.56 Aligned_cols=60 Identities=22% Similarity=0.258 Sum_probs=51.0
Q ss_pred ceEEEEEEEEeccccCchHHHHHHHHHHHHHhcC-CCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 6 GVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 6 g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
...||+|.++... .....+.+.+|+++|+.+ +||||+.+.+++... ..+++|+|||..|+
T Consensus 328 ~~~VaVK~~k~~~---~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~----~~~~~v~Ey~~~G~ 388 (609)
T KOG0200|consen 328 YVTVAVKMLKENA---SSSEKKDLMSELNVLKELGKHPNIVNLLGACTQD----GPLYVIVEYAEHGD 388 (609)
T ss_pred eEEEEEEeccccc---CcHHHHHHHHHHHHHHHhcCCcchhhheeeeccC----CceEEEEEeccCCc
Confidence 5689999987652 346778899999999998 799999999999874 47999999999985
No 355
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=98.92 E-value=1.4e-09 Score=62.60 Aligned_cols=62 Identities=19% Similarity=0.278 Sum_probs=49.9
Q ss_pred cccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCC
Q psy8984 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEET 70 (72)
Q Consensus 3 ~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~ 70 (72)
..+|..||+|.+.... ........+.+|+.+++.++||||+++++++.+. ...++||||+.+
T Consensus 21 ~~~~~~~~iK~~~~~~--~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~----~~~~~v~e~~~~ 82 (282)
T cd07829 21 KKTGEIVALKKIRLDN--EEEGIPSTALREISLLKELKHPNIVKLLDVIHTE----RKLYLVFEYCDM 82 (282)
T ss_pred cCCCcEEEEEEecccc--ccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcC----CceEEEecCcCc
Confidence 4568899999998642 1223345677899999999999999999999876 489999999974
No 356
>KOG1035|consensus
Probab=98.91 E-value=6.5e-10 Score=74.67 Aligned_cols=50 Identities=22% Similarity=0.451 Sum_probs=42.5
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDT 54 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~ 54 (72)
++-+|..||||+|... .+.....++.||+.+|++|+|||||++|..|...
T Consensus 500 NKlDGr~YAIKKIpl~---~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs 549 (1351)
T KOG1035|consen 500 NKLDGREYAIKKIPLK---ASDKLYSKILREVKLLARLNHPNVVRYYSAWVES 549 (1351)
T ss_pred ecccchhhhhhhccCc---hHHHHHHHHHHHHHHHhhcCCcceeeeehhhhcc
Confidence 4567999999999875 2345677899999999999999999999999764
No 357
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=98.90 E-value=1.9e-09 Score=63.65 Aligned_cols=66 Identities=18% Similarity=0.188 Sum_probs=50.7
Q ss_pred cccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCC-CCCCeEEEEEEecCC
Q psy8984 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTH-NDKPRARFLGEYEET 70 (72)
Q Consensus 3 ~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~-~~~~~~~lv~E~~~~ 70 (72)
..+|..||+|.+.... ......+.+.+|+.+++.++||||+++++++.+.. .....+|++|||+.+
T Consensus 22 ~~~~~~~~iK~~~~~~--~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~ 88 (330)
T cd07834 22 KRTGRKVAIKKISNVF--DDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVYIVTELMET 88 (330)
T ss_pred CCCCcEEEEEeecccc--ccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceEEEecchhh
Confidence 4568899999987532 12345567899999999999999999999987652 112368999999874
No 358
>PRK09188 serine/threonine protein kinase; Provisional
Probab=98.89 E-value=1.2e-08 Score=62.06 Aligned_cols=60 Identities=7% Similarity=-0.013 Sum_probs=43.3
Q ss_pred cceEEEEEEEEeccc-cCchHHHHHHHHHHHHHhcCCCcceee-eeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 5 EGVEVVWNEVQFSER-KNFKAQEEKIQQVFENLTQLEHPNIVK-FHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 5 ~g~~vAiK~i~~~~~-~~~~~~~~~~~~Ei~~l~~l~HpnIv~-l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+|..||+|++..... .........+.+|+.+|++++||||+. +++. . ..|+|||||+|++
T Consensus 43 ~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~---~-----~~~LVmE~~~G~~ 104 (365)
T PRK09188 43 PGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT---G-----KDGLVRGWTEGVP 104 (365)
T ss_pred CCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc---C-----CcEEEEEccCCCC
Confidence 677889998753210 012334667999999999999999985 4432 2 5799999999875
No 359
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=98.89 E-value=1.1e-08 Score=56.92 Aligned_cols=62 Identities=26% Similarity=0.304 Sum_probs=50.6
Q ss_pred ccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 4 EEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 4 ~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
.++..+|+|.+.... .......+.+|++.++.++|||++++++++... ...++++||+++|+
T Consensus 22 ~~~~~~~iK~~~~~~---~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~----~~~~~v~e~~~~~~ 83 (225)
T smart00221 22 GTGELVAVKVLKKEK---TEKQREEFLREIRILKKLKHPNIVKLYGVFEDP----EPLYLVMEYCEGGD 83 (225)
T ss_pred CCCcEEEEEeecccc---chHHHHHHHHHHHHHHhCCCCChhhheeeeecC----CceEEEEeccCCCC
Confidence 457889999987642 112567888999999999999999999998775 37899999999864
No 360
>PHA03211 serine/threonine kinase US3; Provisional
Probab=98.88 E-value=9e-09 Score=64.13 Aligned_cols=55 Identities=11% Similarity=0.027 Sum_probs=43.2
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEET 70 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~ 70 (72)
+..++..||+|.... ..+.+|+++|++++|||||++++++... ...++|||++.+
T Consensus 190 ~~~~~~~vavK~~~~----------~~~~~E~~iL~~L~HpnIv~l~~~~~~~----~~~~lv~e~~~~ 244 (461)
T PHA03211 190 HPDYPQRVVVKAGWY----------ASSVHEARLLRRLSHPAVLALLDVRVVG----GLTCLVLPKYRS 244 (461)
T ss_pred ECCCCCEEEEecccc----------cCHHHHHHHHHHCCCCCCCcEEEEEEEC----CEEEEEEEccCC
Confidence 345677888885432 1256899999999999999999998876 378999999864
No 361
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=98.88 E-value=9.9e-09 Score=59.19 Aligned_cols=66 Identities=20% Similarity=0.188 Sum_probs=46.8
Q ss_pred cccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcC---CCcceeeeeeeeeeCCC-CCCeEEEEEEecCC
Q psy8984 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL---EHPNIVKFHRYWTDTHN-DKPRARFLGEYEET 70 (72)
Q Consensus 3 ~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l---~HpnIv~l~~~~~~~~~-~~~~~~lv~E~~~~ 70 (72)
+.+|..||+|.++.... .......+.+|+.+++.+ +||||+++++++.+.+. +...++++|||+.+
T Consensus 21 ~~~~~~~aiK~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~l~~e~~~~ 90 (287)
T cd07838 21 LNTGRFVALKKVRVPLS--EEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELKLTLVFEHVDQ 90 (287)
T ss_pred CCCCCEEEEEEeccccc--cchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCceeEEEehhccc
Confidence 34688999999976421 223345566788777655 69999999999987641 11238999999864
No 362
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=98.87 E-value=8.2e-09 Score=61.54 Aligned_cols=67 Identities=13% Similarity=0.184 Sum_probs=48.8
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCC--CCeEEEEEEecCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHND--KPRARFLGEYEET 70 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~--~~~~~lv~E~~~~ 70 (72)
+..+|..||+|++.... ........+.+|+.+++.++||||+++++++.+.... ...+|++|||+.+
T Consensus 36 ~~~~~~~vaiK~~~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~ 104 (342)
T cd07879 36 DKRTGEKVAIKKLSRPF--QSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQDFYLVMPYMQT 104 (342)
T ss_pred eCCCCcEEEEEEecCcc--ccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCceEEEEeccccc
Confidence 34678899999987532 1222345678999999999999999999998754211 1246999999853
No 363
>KOG4279|consensus
Probab=98.85 E-value=1.7e-09 Score=70.38 Aligned_cols=64 Identities=14% Similarity=0.156 Sum_probs=54.0
Q ss_pred CCcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 1 MDTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 1 ~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+|..|....|||.|... ++...+-+..||.+.++|+|.|||+++|++... ..+-|.||-.+|||
T Consensus 595 RD~~tqvrIaIKEIpek----dsr~~QPLhEEIaLH~~LrHkNIVrYLGs~sen----Gf~kIFMEqVPGGS 658 (1226)
T KOG4279|consen 595 RDMDTQVRIAIKEIPEK----DSREVQPLHEEIALHSTLRHKNIVRYLGSVSEN----GFFKIFMEQVPGGS 658 (1226)
T ss_pred ccccceeEEEeeecccc----cchhhccHHHHHHHHHHHhhHhHHHHhhccCCC----CeEEEEeecCCCCc
Confidence 46778889999999764 345567788999999999999999999998665 47889999999997
No 364
>KOG0608|consensus
Probab=98.85 E-value=1.2e-09 Score=70.37 Aligned_cols=63 Identities=10% Similarity=0.136 Sum_probs=51.0
Q ss_pred cceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 5 EGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 5 ~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
|...||+|.+++.+.. .......++.|-.||...+.+=||+||..|.|.+ ++|+||||++||+
T Consensus 653 T~~lYAmKTLrKaDVl-~rnQvaHVKAERDILAEADn~WVVrLyySFQDkd----nLYFVMdYIPGGD 715 (1034)
T KOG0608|consen 653 TRALYAMKTLRKADVL-MRNQVAHVKAERDILAEADNEWVVRLYYSFQDKD----NLYFVMDYIPGGD 715 (1034)
T ss_pred hhhHHHHhhhHHHHHH-hhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCC----ceEEEEeccCCcc
Confidence 3456788888766542 2344556788999999999999999999999975 8999999999995
No 365
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=98.85 E-value=3.7e-09 Score=60.41 Aligned_cols=44 Identities=30% Similarity=0.441 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 25 QEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 25 ~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
....+.+|+.+++.++||||+++++++.+. ...+++|||+++++
T Consensus 45 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----~~~~lv~e~~~~~~ 88 (260)
T cd08222 45 ETVQANQEAQLLSKLDHPAIVKFHASFLER----DAFCIITEYCEGRD 88 (260)
T ss_pred hHHHHHHHHHHHHhCCCCcHHHHHHHHhcC----CceEEEEEeCCCCC
Confidence 345677899999999999999999998776 37899999999875
No 366
>KOG0612|consensus
Probab=98.84 E-value=2e-10 Score=76.69 Aligned_cols=66 Identities=11% Similarity=0.008 Sum_probs=54.0
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
.+.|++.||+|++++-... .......|..|-.+|..-+.+=|++++.+|.|+ +.+|+|||||+||+
T Consensus 96 ~k~t~~VYAMK~lnK~eMl-Kr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~----~~LYlVMdY~pGGD 161 (1317)
T KOG0612|consen 96 HKSTEKVYAMKILNKWEML-KRAETACFREERDIMVFGNSEWIVQLHYAFQDE----RYLYLVMDYMPGGD 161 (1317)
T ss_pred eeccccchhHHHhhHHHHh-hchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCc----cceEEEEecccCch
Confidence 4678999999999864321 123445678889999999999999999999998 48999999999995
No 367
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=98.83 E-value=4.9e-08 Score=53.20 Aligned_cols=62 Identities=26% Similarity=0.349 Sum_probs=50.4
Q ss_pred ccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 4 EEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 4 ~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
.+|..+++|.+.... .......+.+|++.++.++|++|+++++++... ...++++|++.|++
T Consensus 16 ~~~~~~~~K~~~~~~---~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~----~~~~~~~e~~~~~~ 77 (215)
T cd00180 16 KTGKKVAIKIIKKED---SSSLLEELLREIEILKKLNHPNIVKLYGVFEDE----NHLYLVMEYCEGGS 77 (215)
T ss_pred CCCcEEEEEEecccc---chhHHHHHHHHHHHHHhcCCCCeeeEeeeeecC----CeEEEEEecCCCCc
Confidence 358899999987642 111456789999999999999999999999876 37899999998764
No 368
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=98.83 E-value=3.6e-09 Score=63.07 Aligned_cols=65 Identities=12% Similarity=0.192 Sum_probs=47.7
Q ss_pred cccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCC--CCCeEEEEEEecC
Q psy8984 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHN--DKPRARFLGEYEE 69 (72)
Q Consensus 3 ~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~--~~~~~~lv~E~~~ 69 (72)
..+|..||+|.+.... ........+.+|+.+++.++||||+++++++.+.+. ....+|+|+||+.
T Consensus 37 ~~~~~~~aiK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~ 103 (343)
T cd07851 37 TKTGRKVAIKKLSRPF--QSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQDVYLVTHLMG 103 (343)
T ss_pred CCCCcEEEEEeccccc--chhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccccccEEEEEecCC
Confidence 4578899999886531 122344667889999999999999999998865431 1124899999984
No 369
>PHA03209 serine/threonine kinase US3; Provisional
Probab=98.82 E-value=8.7e-09 Score=61.89 Aligned_cols=54 Identities=11% Similarity=0.031 Sum_probs=42.7
Q ss_pred cccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCC
Q psy8984 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEET 70 (72)
Q Consensus 3 ~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~ 70 (72)
..++..||+|..... ...+|+.+++.++||||+++++++.+. ...++||||+.+
T Consensus 88 ~~~~~~valK~~~~~----------~~~~E~~~l~~l~h~~iv~~~~~~~~~----~~~~lv~e~~~~ 141 (357)
T PHA03209 88 PGQPDPVVLKIGQKG----------TTLIEAMLLQNVNHPSVIRMKDTLVSG----AITCMVLPHYSS 141 (357)
T ss_pred CCCCceEEEEeCCcc----------ccHHHHHHHHhCCCCCCcChhheEEeC----CeeEEEEEccCC
Confidence 346678898864321 135699999999999999999999886 378999999865
No 370
>KOG0667|consensus
Probab=98.81 E-value=1.2e-08 Score=64.88 Aligned_cols=59 Identities=22% Similarity=0.173 Sum_probs=49.5
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCC-Cc-----ceeeeeeeeeeCCCCCCeEEEEEEecC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLE-HP-----NIVKFHRYWTDTHNDKPRARFLGEYEE 69 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~-Hp-----nIv~l~~~~~~~~~~~~~~~lv~E~~~ 69 (72)
|..|++.||||+++.. .....+...|+.+|..|+ |. |+|+++++|... +.++||+|+++
T Consensus 207 d~~T~e~VAIKIiKN~-----k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr----~HlciVfELL~ 271 (586)
T KOG0667|consen 207 DHKTGEIVAIKIIKNK-----KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFR----NHLCIVFELLS 271 (586)
T ss_pred ecCCCcEEEEEeeccC-----hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccc----cceeeeehhhh
Confidence 6789999999999753 456677788999999997 43 999999999886 48999999874
No 371
>KOG1006|consensus
Probab=98.80 E-value=3.5e-09 Score=62.43 Aligned_cols=61 Identities=15% Similarity=0.214 Sum_probs=50.4
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHH-HhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFEN-LTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEE 69 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~-l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~ 69 (72)
++++|+..|+|+|+.. ......++++.|.+. ++.-+.||||++||+...+. ..||-||+|+
T Consensus 85 hk~sg~~mAVKrIr~~---n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EG----dcWiCMELMd 146 (361)
T KOG1006|consen 85 HKPSGKLMAVKRIRSN---NIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEG----DCWICMELMD 146 (361)
T ss_pred cCccCcEEEEEEeeec---cchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCC----ceeeeHHHHh
Confidence 6789999999999864 344567788999975 56668999999999988763 7899999986
No 372
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=98.80 E-value=4.4e-08 Score=56.58 Aligned_cols=58 Identities=10% Similarity=0.014 Sum_probs=40.7
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcC-CCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
++.+|..+|+|.+..... .. .|+.....+ +||||+++++.+.+. +.+|+||||+++|+
T Consensus 37 ~~~~~~~~~~k~~~~~~~----~~-----~e~~~~~~~~~h~~iv~~~~~~~~~----~~~~iv~e~~~~~~ 95 (267)
T PHA03390 37 HKPTQKLFVQKIIKAKNF----NA-----IEPMVHQLMKDNPNFIKLYYSVTTL----KGHVLIMDYIKDGD 95 (267)
T ss_pred EcCCCcEEEEEEEehhhc----ch-----hhHHHHHHhhcCCCEEEEEEEEecC----CeeEEEEEcCCCCc
Confidence 356788899999875321 11 122222212 799999999999886 38999999999885
No 373
>KOG1151|consensus
Probab=98.79 E-value=2.4e-08 Score=62.58 Aligned_cols=67 Identities=22% Similarity=0.275 Sum_probs=50.8
Q ss_pred CCcccceEEEEEEEEeccccCchH-----HHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 1 MDTEEGVEVVWNEVQFSERKNFKA-----QEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 1 ~~~~~g~~vAiK~i~~~~~~~~~~-----~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+|....+.||+|+-.+.. .+.+ -.+..-||-.|.+.|+||-||++|++|.-+. ..++-|+|||+|.+
T Consensus 483 FDl~EqRYvAvKIHqlNK--~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDt---dsFCTVLEYceGND 554 (775)
T KOG1151|consen 483 FDLTEQRYVAVKIHQLNK--NWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDT---DSFCTVLEYCEGND 554 (775)
T ss_pred cccchhheeeEeeehhcc--chhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeecc---ccceeeeeecCCCc
Confidence 456667889999876532 2222 2345679999999999999999999996442 47899999999863
No 374
>KOG2345|consensus
Probab=98.75 E-value=4.1e-09 Score=61.41 Aligned_cols=66 Identities=14% Similarity=0.171 Sum_probs=53.7
Q ss_pred cccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCC-CCCeEEEEEEecCCCC
Q psy8984 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHN-DKPRARFLGEYEETPT 72 (72)
Q Consensus 3 ~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~-~~~~~~lv~E~~~~Gs 72 (72)
..++..||+|++... .....+...+|++.-++++||||++++++...... ++..+||++.|...||
T Consensus 43 ~s~~~~YAlKkI~c~----~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~yll~Pyy~~Gs 109 (302)
T KOG2345|consen 43 LSTGHLYALKKILCH----SQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAYLLLPYYKRGS 109 (302)
T ss_pred cCcccchhhheeecc----chHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEEEEeehhcccc
Confidence 457889999999764 34667889999999999999999999998754332 3567999999998885
No 375
>KOG1152|consensus
Probab=98.74 E-value=4.1e-09 Score=67.18 Aligned_cols=62 Identities=19% Similarity=0.147 Sum_probs=48.0
Q ss_pred CcccceEEEEEEEEeccccCchHH----HHHHHHHHHHHhcCC---CcceeeeeeeeeeCCCCCCeEEEEEEe
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQ----EEKIQQVFENLTQLE---HPNIVKFHRYWTDTHNDKPRARFLGEY 67 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~----~~~~~~Ei~~l~~l~---HpnIv~l~~~~~~~~~~~~~~~lv~E~ 67 (72)
+++....|++|.|.++....+... ...+-.||+||..|+ |+||++++++|++.+ .+||+||-
T Consensus 582 ~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEddd----~yyl~te~ 650 (772)
T KOG1152|consen 582 HKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFEDDD----YYYLETEV 650 (772)
T ss_pred ecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeecCC----eeEEEecC
Confidence 556678999999987643323222 234568999999997 999999999999974 89999984
No 376
>KOG0193|consensus
Probab=98.72 E-value=3.2e-08 Score=63.12 Aligned_cols=58 Identities=14% Similarity=0.187 Sum_probs=50.6
Q ss_pred EEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 8 EVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 8 ~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
.||||.+++.. ..++..+.|+.|+.++++-+|-||+=+.|++..+ .+.||+.+|.|-|
T Consensus 416 dVAVK~Lnv~~--pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p-----~~AIiTqwCeGsS 473 (678)
T KOG0193|consen 416 DVAVKLLNVDD--PTPEQLQAFKNEVAVLKKTRHENILLFMGACMNP-----PLAIITQWCEGSS 473 (678)
T ss_pred ceEEEEEecCC--CCHHHHHHHHHHHHHHhhcchhhheeeehhhcCC-----ceeeeehhccCch
Confidence 59999999875 3556889999999999999999999999999876 4689999998754
No 377
>KOG0668|consensus
Probab=98.72 E-value=1.1e-08 Score=59.41 Aligned_cols=59 Identities=20% Similarity=0.295 Sum_probs=47.2
Q ss_pred cccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCC-CcceeeeeeeeeeCCCCCCeEEEEEEecCC
Q psy8984 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLE-HPNIVKFHRYWTDTHNDKPRARFLGEYEET 70 (72)
Q Consensus 3 ~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~-HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~ 70 (72)
..+.+.++||.++. -..+++.||+.||..|. |||||++++...++. +....+|+||.++
T Consensus 60 ~~~~eK~ViKiLKP-------VkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~--SktpaLiFE~v~n 119 (338)
T KOG0668|consen 60 ITNNEKCVIKILKP-------VKKKKIKREIKILQNLRGGPNIIKLLDIVKDPE--SKTPSLIFEYVNN 119 (338)
T ss_pred cCCCceEEEeeech-------HHHHHHHHHHHHHHhccCCCCeeehhhhhcCcc--ccCchhHhhhhcc
Confidence 35667889998864 34567999999999996 999999999998764 3456789998875
No 378
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=98.70 E-value=1.2e-07 Score=56.34 Aligned_cols=63 Identities=13% Similarity=0.015 Sum_probs=45.0
Q ss_pred ceEEEEEEEEeccccCchHHHHHHHHHHHHHhcC-CCcceeeeeeeeeeCCCCCCeEEEEEEecCC
Q psy8984 6 GVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHNDKPRARFLGEYEET 70 (72)
Q Consensus 6 g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~ 70 (72)
|..||+|.+.... ......+.+.+|+.+++++ +||||+++++.+.........+|+++||+.+
T Consensus 27 ~~~~aiK~~~~~~--~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~e~~~~ 90 (332)
T cd07857 27 EETVAIKKITNVF--SKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNELYLYEELMEA 90 (332)
T ss_pred CceEEEEEecccc--ccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcEEEEEecccC
Confidence 7789999987531 1223456678899999999 5999999999754321112357899999864
No 379
>KOG1025|consensus
Probab=98.69 E-value=3e-09 Score=69.95 Aligned_cols=59 Identities=8% Similarity=0.078 Sum_probs=49.5
Q ss_pred ceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 6 GVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 6 g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
..+||||++... ........++.|.-+|.+++|||+++|++++... .+-||++||++|+
T Consensus 725 KipVaiKvl~~~---t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s-----~~qlvtq~mP~G~ 783 (1177)
T KOG1025|consen 725 KIPVAIKVLIEF---TSPKASIELLDEALRMASLDHPNLLRLLGVCMLS-----TLQLVTQLMPLGC 783 (1177)
T ss_pred cceeEEEEeecc---CCchhhHHHHHHHHHHhcCCCchHHHHhhhcccc-----hHHHHHHhcccch
Confidence 357999998764 2345567899999999999999999999999875 5778999999985
No 380
>KOG0665|consensus
Probab=98.69 E-value=1.1e-09 Score=65.38 Aligned_cols=68 Identities=12% Similarity=0.146 Sum_probs=52.4
Q ss_pred CCcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCC--CCeEEEEEEecCC
Q psy8984 1 MDTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHND--KPRARFLGEYEET 70 (72)
Q Consensus 1 ~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~--~~~~~lv~E~~~~ 70 (72)
+|.-++.+||+|++... . .......+..||..++..++|+|||+++.+|...... -..+|+|||||+.
T Consensus 36 ~D~v~~~~v~ikk~~~p-f-~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~y~v~e~m~~ 105 (369)
T KOG0665|consen 36 FDQVLGRPVAIKKLSRP-F-QNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEVYLVMELMDA 105 (369)
T ss_pred chhhccCceehhhhcCc-c-ccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhHHHHHHhhhh
Confidence 36678899999998765 2 2234456788999999999999999999999764311 2258999999974
No 381
>KOG0666|consensus
Probab=98.69 E-value=1.1e-09 Score=65.66 Aligned_cols=59 Identities=15% Similarity=0.236 Sum_probs=46.5
Q ss_pred eEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCC
Q psy8984 7 VEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEET 70 (72)
Q Consensus 7 ~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~ 70 (72)
+.+|||+++-+. .........-||+.+++.|+|||||.|..+|...+ .++|+++||++.
T Consensus 54 k~yAiKkfk~~k--d~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d---~~v~l~fdYAEh 112 (438)
T KOG0666|consen 54 KEYAIKKFKGEK--DGTGISMSACREIALLRELKHPNVISLVKVFLSHD---KKVWLLFDYAEH 112 (438)
T ss_pred hhhHHHHHhccC--CCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccC---ceEEEEehhhhh
Confidence 478999887542 12234456789999999999999999999998754 689999999863
No 382
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=98.68 E-value=7.1e-08 Score=55.67 Aligned_cols=67 Identities=6% Similarity=0.050 Sum_probs=47.3
Q ss_pred cceEEEEEEEEeccccCchHHHHH------HHHHHHHHhcCCCcceeeeeeeeeeCCCC----CCeEEEEEEecCCCC
Q psy8984 5 EGVEVVWNEVQFSERKNFKAQEEK------IQQVFENLTQLEHPNIVKFHRYWTDTHND----KPRARFLGEYEETPT 72 (72)
Q Consensus 5 ~g~~vAiK~i~~~~~~~~~~~~~~------~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~----~~~~~lv~E~~~~Gs 72 (72)
++..+|+|.++.... ..+...+. +.+|+..+.++.||+|..+.+++.+.... ....+|+|||++|.+
T Consensus 53 ~~~~~iiKvf~~~~~-~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~~~~~~~~~~~~lvmEyi~G~t 129 (232)
T PRK10359 53 DYGKYILKVFAPKVK-RTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAERKTLRYAHTYIMLIEYIEGVE 129 (232)
T ss_pred CCCcEEEEEechhcC-chHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeecccccccccCCeEEEEEEECCcc
Confidence 355799999875421 22222233 67999999999999999999987654200 125789999999864
No 383
>KOG1027|consensus
Probab=98.53 E-value=4.8e-08 Score=64.05 Aligned_cols=55 Identities=22% Similarity=0.159 Sum_probs=43.9
Q ss_pred cceEEEEEEEEeccccCchHHHHHHHHHHHHHhcC-CCcceeeeeeeeeeCCCCCCeEEEEEEecCC
Q psy8984 5 EGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHNDKPRARFLGEYEET 70 (72)
Q Consensus 5 ~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~ 70 (72)
.|+.||||++-. ......+|||..|+.- .|||||++|+.-.+. ..+||..|+|..
T Consensus 532 e~R~VAVKrll~-------e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~----qF~YIalELC~~ 587 (903)
T KOG1027|consen 532 EGREVAVKRLLE-------EFFDFAQREIQLLQESDEHPNVIRYYCSEQDR----QFLYIALELCAC 587 (903)
T ss_pred CCceehHHHHhh-------HhHHHHHHHHHHHHhccCCCceEEEEeeccCC----ceEEEEehHhhh
Confidence 366899888743 3345678999999988 799999999987766 489999999863
No 384
>KOG0695|consensus
Probab=98.52 E-value=6.9e-08 Score=58.89 Aligned_cols=65 Identities=17% Similarity=0.130 Sum_probs=52.6
Q ss_pred cccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcC-CCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 3 ~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
++|.+.||+|.++++-. +......-++.|-.+..+. +||.+|.++.+|.++. .+++|.||.+||+
T Consensus 272 ~~t~qiyamkvvkkel~-nddedidwvqtek~vfe~asn~pflvglhscfqtes----rlffvieyv~ggd 337 (593)
T KOG0695|consen 272 KKTDQIYAMKVVKKELV-NDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTES----RLFFVIEYVNGGD 337 (593)
T ss_pred cccceeeehhhHHHHhc-CCcccchhHHhhHHHHHhccCCCeEEehhhhhcccc----eEEEEEEEecCcc
Confidence 57888999999987633 3444566677888777665 8999999999999884 8999999999995
No 385
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=98.52 E-value=1.6e-07 Score=52.56 Aligned_cols=61 Identities=16% Similarity=0.041 Sum_probs=39.4
Q ss_pred cceEEEEEEEEeccccCchH-----------------------HHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeE
Q psy8984 5 EGVEVVWNEVQFSERKNFKA-----------------------QEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRA 61 (72)
Q Consensus 5 ~g~~vAiK~i~~~~~~~~~~-----------------------~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~ 61 (72)
+|+.||+|.++.... .... ......+|+.+|+.+.++++.....+. .. ..
T Consensus 20 ~g~~vAvKv~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v~~p~~~~-~~-----~~ 92 (190)
T cd05147 20 NGEERAIKIYKTSIL-VFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGIPCPEPIL-LK-----SH 92 (190)
T ss_pred CCCEEEEEEEEeccc-ccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCcEEE-ec-----CC
Confidence 799999999986421 0000 012335699999999888775443332 22 23
Q ss_pred EEEEEecCCCC
Q psy8984 62 RFLGEYEETPT 72 (72)
Q Consensus 62 ~lv~E~~~~Gs 72 (72)
+|||||++|++
T Consensus 93 ~iVmE~i~g~~ 103 (190)
T cd05147 93 VLVMEFIGDDG 103 (190)
T ss_pred EEEEEEeCCCC
Confidence 89999998863
No 386
>PHA03210 serine/threonine kinase US3; Provisional
Probab=98.51 E-value=3.8e-07 Score=57.30 Aligned_cols=42 Identities=14% Similarity=0.216 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCC
Q psy8984 25 QEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEET 70 (72)
Q Consensus 25 ~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~ 70 (72)
....+.+|+.+|++++||||+++++++.+.+ ..|+++|++.+
T Consensus 206 ~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~----~~~lv~e~~~~ 247 (501)
T PHA03210 206 AAIQLENEILALGRLNHENILKIEEILRSEA----NTYMITQKYDF 247 (501)
T ss_pred HHHHHHHHHHHHHhCCCCCcCcEeEEEEECC----eeEEEEecccc
Confidence 3456789999999999999999999998874 78999998754
No 387
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=98.49 E-value=5.2e-07 Score=50.26 Aligned_cols=61 Identities=13% Similarity=0.029 Sum_probs=41.6
Q ss_pred cceEEEEEEEEeccccCc--------------------h--HHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEE
Q psy8984 5 EGVEVVWNEVQFSERKNF--------------------K--AQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRAR 62 (72)
Q Consensus 5 ~g~~vAiK~i~~~~~~~~--------------------~--~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~ 62 (72)
+|..||+|.++....... . .....+.+|...+.++.|++|.....+.... .|
T Consensus 20 ~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~------~~ 93 (190)
T cd05145 20 DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGVPVPEPILLKK------NV 93 (190)
T ss_pred CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCCCCceEEEecC------CE
Confidence 799999999986421000 0 0123346899999999999986655554332 38
Q ss_pred EEEEecCCC
Q psy8984 63 FLGEYEETP 71 (72)
Q Consensus 63 lv~E~~~~G 71 (72)
|||||++|+
T Consensus 94 lVmE~~~g~ 102 (190)
T cd05145 94 LVMEFIGDD 102 (190)
T ss_pred EEEEEecCC
Confidence 999999886
No 388
>KOG0986|consensus
Probab=98.49 E-value=3.3e-08 Score=61.72 Aligned_cols=65 Identities=9% Similarity=0.028 Sum_probs=52.8
Q ss_pred cccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 3 ~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+.||+.||+|++.+... .........+.|-.||.+++.|.||.+-.+|++.+ .+++||..|+||+
T Consensus 207 raTGKMYAcKkL~KKRi-Kkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd----~LClVLtlMNGGD 271 (591)
T KOG0986|consen 207 RATGKMYACKKLDKKRI-KKRKGETMALNEKQILEKVSSPFIVSLAYAFETKD----ALCLVLTLMNGGD 271 (591)
T ss_pred ecchhhHHHHHHHHHHH-HHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCC----ceEEEEEeecCCc
Confidence 35788899998876532 22334566789999999999999999999998874 8999999999996
No 389
>PTZ00284 protein kinase; Provisional
Probab=98.48 E-value=1.1e-06 Score=54.60 Aligned_cols=60 Identities=8% Similarity=0.062 Sum_probs=41.7
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCC------CcceeeeeeeeeeCCCCCCeEEEEEEecC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLE------HPNIVKFHRYWTDTHNDKPRARFLGEYEE 69 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~------HpnIv~l~~~~~~~~~~~~~~~lv~E~~~ 69 (72)
+..++..||+|+++.. ........+|+.+++.++ |++|+.++++|.... ..+|+|||++.
T Consensus 150 ~~~~~~~vAvK~i~~~-----~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~---~~~~iv~~~~g 215 (467)
T PTZ00284 150 DRKRKEYCAVKIVRNV-----PKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNET---GHMCIVMPKYG 215 (467)
T ss_pred EcCCCeEEEEEEEecc-----hhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCC---ceEEEEEeccC
Confidence 4567889999999642 122334556776666654 456899999987653 47899999884
No 390
>KOG2052|consensus
Probab=98.47 E-value=1.7e-07 Score=58.30 Aligned_cols=61 Identities=18% Similarity=0.184 Sum_probs=45.8
Q ss_pred cceEEEEEEEEeccccCchHHHHHHHHHHHHHhc--CCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 5 EGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQ--LEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 5 ~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~--l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
.|+.||+|++... ......||.+|-+. |+|+||+.+..+-....+.-.++|||++|-+.||
T Consensus 233 rGe~VAVKiF~sr-------dE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLvTdYHe~GS 295 (513)
T KOG2052|consen 233 RGEDVAVKIFSSR-------DERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWLVTDYHEHGS 295 (513)
T ss_pred cCCceEEEEeccc-------chhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEEeeecccCCc
Confidence 5788999998642 33557788888775 5999999999875433222346999999999997
No 391
>KOG0696|consensus
Probab=98.46 E-value=1e-08 Score=63.70 Aligned_cols=64 Identities=14% Similarity=0.049 Sum_probs=49.0
Q ss_pred ccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcC-CCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 4 EEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 4 ~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
-|.+.||||++++.-. ...+..+-...|-++|+.. +-|.+++++.+|.+.+ .+|+||||+.||+
T Consensus 372 gtdELyAiKiLkKDVi-iQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmD----RLyFVMEyvnGGD 436 (683)
T KOG0696|consen 372 GTDELYAIKILKKDVI-IQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMD----RLYFVMEYVNGGD 436 (683)
T ss_pred Ccchhhhhhhhcccee-eecCcccceehhhhheecCCCCchHHHHHHHhhhhh----heeeEEEEecCch
Confidence 4567899999987532 2223344455678888876 6789999999999875 8999999999995
No 392
>KOG0669|consensus
Probab=98.46 E-value=2.4e-09 Score=62.85 Aligned_cols=66 Identities=14% Similarity=0.169 Sum_probs=49.0
Q ss_pred cccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCC----CCeEEEEEEecCC
Q psy8984 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHND----KPRARFLGEYEET 70 (72)
Q Consensus 3 ~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~----~~~~~lv~E~~~~ 70 (72)
+.+|+.||+|++-++.. .........||+.+|..|+|+|++.+.+.|.+...+ +..+|+|+++|+.
T Consensus 39 ~n~~kkvalkkvlmene--KeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t~ylVf~~ceh 108 (376)
T KOG0669|consen 39 KNTGKKVALKKVLMENE--KEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRATFYLVFDFCEH 108 (376)
T ss_pred cCccchhHHHHHHHhcc--ccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccceeeeeHHHhhh
Confidence 56788899987755421 223445678999999999999999999988654322 3459999999964
No 393
>KOG0984|consensus
Probab=98.46 E-value=3.9e-07 Score=52.42 Aligned_cols=61 Identities=8% Similarity=0.109 Sum_probs=49.9
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHh-cCCCcceeeeeeeeeeCCCCCCeEEEEEEecC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLT-QLEHPNIVKFHRYWTDTHNDKPRARFLGEYEE 69 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~-~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~ 69 (72)
+..+|...|+|.++.. .......+.++|+.+.. ....|.+|.+||.+..+. .+||.||.|+
T Consensus 67 h~~sg~imAvKri~~t---vn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~reg----dvwIcME~M~ 128 (282)
T KOG0984|consen 67 HIQSGTIMAVKRIRAT---VNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREG----DVWICMELMD 128 (282)
T ss_pred eccCCeEEEEeeehhh---cChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccc----cEEEeHHHhh
Confidence 4678999999999864 24466778899998755 558999999999988773 8999999886
No 394
>KOG3653|consensus
Probab=98.45 E-value=3e-07 Score=57.48 Aligned_cols=61 Identities=13% Similarity=0.138 Sum_probs=46.1
Q ss_pred cceEEEEEEEEeccccCchHHHHHHHHHHHHHh--cCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 5 EGVEVVWNEVQFSERKNFKAQEEKIQQVFENLT--QLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 5 ~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~--~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
.++.||||++... ..+.++.|-+|.+ .++|+||++++++-.-.+.....++||+||-+.||
T Consensus 232 ~~~~VAVKifp~~-------~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~fh~kGs 294 (534)
T KOG3653|consen 232 DNRLVAVKIFPEQ-------EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVTEFHPKGS 294 (534)
T ss_pred cCceeEEEecCHH-------HHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEeeeccCCc
Confidence 4578999998653 3456777777655 56899999999986544333457999999999986
No 395
>PRK14879 serine/threonine protein kinase; Provisional
Probab=98.40 E-value=1.2e-06 Score=49.01 Aligned_cols=64 Identities=13% Similarity=0.125 Sum_probs=44.9
Q ss_pred cceEEEEEEEEeccccCc----hHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 5 EGVEVVWNEVQFSERKNF----KAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 5 ~g~~vAiK~i~~~~~~~~----~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
.|..+++|.......... ......+.+|+.++..+.|++|.....++.+. ...+++|||++|++
T Consensus 18 ~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~----~~~~lv~e~~~G~~ 85 (211)
T PRK14879 18 LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDP----ENFIIVMEYIEGEP 85 (211)
T ss_pred CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeC----CCCEEEEEEeCCcC
Confidence 466789997653211111 11234678999999999999988777776655 36789999999875
No 396
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=98.38 E-value=1.5e-06 Score=48.35 Aligned_cols=64 Identities=16% Similarity=0.139 Sum_probs=42.3
Q ss_pred cceEEEEEEEEeccccCc----hHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 5 EGVEVVWNEVQFSERKNF----KAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 5 ~g~~vAiK~i~~~~~~~~----~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+|..+++|.......... ......+.+|+.+++.+.|+++....-++.+. ...+++|||++|++
T Consensus 16 ~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~----~~~~lv~e~~~g~~ 83 (199)
T TIGR03724 16 LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDP----DNKTIVMEYIEGKP 83 (199)
T ss_pred CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC----CCCEEEEEEECCcc
Confidence 567899998653211111 11235678999999999988765544444444 25789999999875
No 397
>KOG0596|consensus
Probab=98.36 E-value=4.6e-07 Score=57.76 Aligned_cols=57 Identities=14% Similarity=0.114 Sum_probs=46.0
Q ss_pred eEEEEEEEEeccccCchHHHHHHHHHHHHHhcC-CCcceeeeeeeeeeCCCCCCeEEEEEEecC
Q psy8984 7 VEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHNDKPRARFLGEYEE 69 (72)
Q Consensus 7 ~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~ 69 (72)
..||+|++.... .+.....-+..||.+|.+| .|.+||+|+++-..+ ..+||||||=+
T Consensus 386 ~iyalkkv~~~~--~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d----~~lYmvmE~Gd 443 (677)
T KOG0596|consen 386 QIYALKKVVLLE--ADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTD----GYLYMVMECGD 443 (677)
T ss_pred cchhhhHHHHhh--cCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccC----ceEEEEeeccc
Confidence 467777776542 4567788899999999999 699999999997776 48999999743
No 398
>KOG0983|consensus
Probab=98.25 E-value=5.1e-07 Score=53.80 Aligned_cols=60 Identities=13% Similarity=0.192 Sum_probs=48.8
Q ss_pred cccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcC-CCcceeeeeeeeeeCCCCCCeEEEEEEecC
Q psy8984 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHNDKPRARFLGEYEE 69 (72)
Q Consensus 3 ~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~ 69 (72)
++||...|+|.+... ......+++++.+.++... +.|+||+.+|+|.... .++|-||+|.
T Consensus 114 rs~~~iiAVK~M~rt---~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~----dV~IcMelMs 174 (391)
T KOG0983|consen 114 RSTGHIIAVKQMRRT---GNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNT----DVFICMELMS 174 (391)
T ss_pred cccceEEEEEeeccc---CCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCc----hHHHHHHHHH
Confidence 568899999999865 3456778899999877665 5999999999998863 7888888774
No 399
>KOG1243|consensus
Probab=98.22 E-value=2.5e-06 Score=55.23 Aligned_cols=58 Identities=19% Similarity=0.192 Sum_probs=46.4
Q ss_pred cccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEec
Q psy8984 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYE 68 (72)
Q Consensus 3 ~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~ 68 (72)
+.+|.+|.+...+.+. ........+-+.-|+.++||||+++++.++.+ ..+|||+|-+
T Consensus 34 k~~~~~vsVF~~~~~~----~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~----~~~ylvTErV 91 (690)
T KOG1243|consen 34 KADGGPVSVFVYKRSN----GEVTELAKRAVKRLKTLRHPNILSYLDTTEEE----GTLYLVTERV 91 (690)
T ss_pred eccCCceEEEEEeCCC----chhhHHHHHHHHHhhhccCchhhhhhhhhccc----CceEEEeecc
Confidence 4567889998887642 23445677788999999999999999999887 3899999955
No 400
>smart00090 RIO RIO-like kinase.
Probab=98.18 E-value=7e-06 Score=47.44 Aligned_cols=65 Identities=14% Similarity=-0.030 Sum_probs=40.4
Q ss_pred CcccceEEEEEEEEeccccC------------------ch--HHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeE
Q psy8984 2 DTEEGVEVVWNEVQFSERKN------------------FK--AQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRA 61 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~------------------~~--~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~ 61 (72)
+..+|..||+|.++...... .. .....+.+|+.+++.+.+. ++.....+... ..
T Consensus 50 ~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~~~-~i~~p~~~~~~-----~~ 123 (237)
T smart00090 50 FDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLYEA-GVPVPKPIAWR-----RN 123 (237)
T ss_pred cCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHHhc-CCCCCeeeEec-----Cc
Confidence 34689999999997542100 00 0123467899999999753 33333333232 34
Q ss_pred EEEEEecCCCC
Q psy8984 62 RFLGEYEETPT 72 (72)
Q Consensus 62 ~lv~E~~~~Gs 72 (72)
++||||++|++
T Consensus 124 ~lV~E~~~g~~ 134 (237)
T smart00090 124 VLVMEFIGGDG 134 (237)
T ss_pred eEEEEEecCCc
Confidence 89999999864
No 401
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=98.08 E-value=2.3e-05 Score=49.84 Aligned_cols=43 Identities=14% Similarity=0.111 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 26 EEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 26 ~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
.+.+.+|+++++.++|++|+....++.+.. ..++||||++|++
T Consensus 380 ~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~----~~~lv~E~~~g~~ 422 (535)
T PRK09605 380 TERTRAEARLLSEARRAGVPTPVIYDVDPE----EKTIVMEYIGGKD 422 (535)
T ss_pred HHHHHHHHHHHHhhcccCCCeeEEEEEeCC----CCEEEEEecCCCc
Confidence 456889999999999999998877766643 5789999999885
No 402
>KOG1290|consensus
Probab=98.07 E-value=1.8e-05 Score=50.15 Aligned_cols=63 Identities=16% Similarity=0.145 Sum_probs=48.5
Q ss_pred CCcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCC-----Cc---ceeeeeeeeeeCCCCCCeEEEEEEec
Q psy8984 1 MDTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLE-----HP---NIVKFHRYWTDTHNDKPRARFLGEYE 68 (72)
Q Consensus 1 ~~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~-----Hp---nIv~l~~~~~~~~~~~~~~~lv~E~~ 68 (72)
.|+++.+.||+|+.+-. +--.+....||.+|++++ |+ .||+|++.|....+....++||+|++
T Consensus 98 wDtq~~r~VAlKVvKSA-----qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGpNG~HVCMVfEvL 168 (590)
T KOG1290|consen 98 WDTQNKRYVALKVVKSA-----QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGPNGQHVCMVFEVL 168 (590)
T ss_pred eeccCCeEEEEEEEehh-----hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCCCCcEEEEEehhh
Confidence 37788899999988642 234566788999999873 33 79999999987655456899999987
No 403
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=98.05 E-value=1.4e-05 Score=50.74 Aligned_cols=65 Identities=15% Similarity=0.208 Sum_probs=40.6
Q ss_pred ccceEEEEEEEEeccccCchHHH--------------HHHHHHHHHHhcCCCcce-----eeeeeeeeeCCC----CCCe
Q psy8984 4 EEGVEVVWNEVQFSERKNFKAQE--------------EKIQQVFENLTQLEHPNI-----VKFHRYWTDTHN----DKPR 60 (72)
Q Consensus 4 ~~g~~vAiK~i~~~~~~~~~~~~--------------~~~~~Ei~~l~~l~HpnI-----v~l~~~~~~~~~----~~~~ 60 (72)
..+..||+|++.... .... +....|+.++.+++|.++ ++++++|..... ....
T Consensus 184 ~~~r~VAVK~l~~~~----~~~~~~fl~e~~~~~~~~e~~~vE~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~ 259 (507)
T PLN03224 184 QKKRRVVLKRVNMDR----QGVRQDFLKTGTLAKGSAETGMVEAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGS 259 (507)
T ss_pred ccCceEEEEEecccc----hhhHHHHHhhhhhhhcccchhHHHHHHHHHhhcccchhhhhhhhhhhcccccccccccCCc
Confidence 346789999987532 1112 223357777777766654 667777653210 1236
Q ss_pred EEEEEEecCCCC
Q psy8984 61 ARFLGEYEETPT 72 (72)
Q Consensus 61 ~~lv~E~~~~Gs 72 (72)
.|+||||+++||
T Consensus 260 ~~LV~Ey~~~gs 271 (507)
T PLN03224 260 QWLVWKFESDAT 271 (507)
T ss_pred eEEEEEcCCCCc
Confidence 899999999885
No 404
>KOG0603|consensus
Probab=98.04 E-value=1.7e-06 Score=55.48 Aligned_cols=58 Identities=19% Similarity=0.164 Sum_probs=44.4
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhc-CCCcceeeeeeeeeeCCCCCCeEEEEEEecCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQ-LEHPNIVKFHRYWTDTHNDKPRARFLGEYEETP 71 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~-l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~G 71 (72)
+..++..+|+|++..+. ....+|+.++.. -+||||+++++.+.+. ..+|+|||++.||
T Consensus 343 ~~~t~~~~~vkii~~~~--------~~~~~e~~~~~~~~~h~niv~~~~v~~~~----~~~~~v~e~l~g~ 401 (612)
T KOG0603|consen 343 SSPTDQEPAVKIISKRA--------DDNQDEIPISLLVRDHPNIVKSHDVYEDG----KEIYLVMELLDGG 401 (612)
T ss_pred ccccccchhheeccccc--------cccccccchhhhhcCCCcceeecceecCC----ceeeeeehhcccc
Confidence 45677788888886541 224567765554 4899999999999887 4899999999987
No 405
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=97.96 E-value=2.1e-05 Score=41.08 Aligned_cols=55 Identities=15% Similarity=0.004 Sum_probs=42.0
Q ss_pred eEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCC--cceeeeeeeeeeCCCCCCeEEEEEEecCCC
Q psy8984 7 VEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEH--PNIVKFHRYWTDTHNDKPRARFLGEYEETP 71 (72)
Q Consensus 7 ~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~H--pnIv~l~~~~~~~~~~~~~~~lv~E~~~~G 71 (72)
..+++|...... . ...+.+|+.+++.++| +++++++.+.... +..|++|||+.|+
T Consensus 22 ~~~~iK~~~~~~-----~-~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~----~~~~~v~e~~~g~ 78 (155)
T cd05120 22 EDYVLKINPSRE-----K-GADREREVAILQLLARKGLPVPKVLASGESD----GWSYLLMEWIEGE 78 (155)
T ss_pred CeEEEEecCCCC-----c-hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCC----CccEEEEEecCCe
Confidence 568888775431 1 4568899999999976 5899988877654 3689999999876
No 406
>PRK12274 serine/threonine protein kinase; Provisional
Probab=97.96 E-value=4.4e-05 Score=43.87 Aligned_cols=37 Identities=14% Similarity=0.134 Sum_probs=30.7
Q ss_pred HHHHHHHHHhcC-CCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 28 KIQQVFENLTQL-EHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 28 ~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
.+.+|+++|++| +|++|++++++ . ..|++|||+.|++
T Consensus 47 l~~rE~~iL~~L~~~~~vP~ll~~---~-----~~~lvmeyI~G~~ 84 (218)
T PRK12274 47 LARREALALRQLDGLPRTPRLLHW---D-----GRHLDRSYLAGAA 84 (218)
T ss_pred HHHHHHHHHHhcCCCCCCCEEEEE---c-----CEEEEEeeecCcc
Confidence 688999999999 45889999885 2 4689999998764
No 407
>KOG0614|consensus
Probab=97.94 E-value=1.2e-07 Score=60.19 Aligned_cols=60 Identities=13% Similarity=0.018 Sum_probs=49.5
Q ss_pred EEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 8 EVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 8 ~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
.+|+|.+++... .+....+.+..|-.||..++.|.||++|..|.+. ..+|++||-|-||.
T Consensus 447 ~fAlKilkK~hI-VdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~----kyvYmLmEaClGGE 506 (732)
T KOG0614|consen 447 TFALKILKKKHI-VDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDS----KYVYMLMEACLGGE 506 (732)
T ss_pred HHHHHHHhHhhc-cchhHHHHHHhHHHHHHhcCchHHHHHHHHhccc----hhhhhhHHhhcCch
Confidence 377888876543 3445667788999999999999999999999987 48999999999984
No 408
>KOG0195|consensus
Probab=97.93 E-value=8.1e-07 Score=53.06 Aligned_cols=61 Identities=16% Similarity=0.233 Sum_probs=47.9
Q ss_pred ceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 6 GVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 6 g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
|..++.|.++..+ ........|..|.-.|+-+.||||+.+++.|.+++ .+.+|..||+.||
T Consensus 213 gndivakil~vr~--~t~risrdfneefp~lrifshpnilpvlgacnspp----nlv~isq~mp~gs 273 (448)
T KOG0195|consen 213 GNDIVAKILNVRE--VTARISRDFNEEFPALRIFSHPNILPVLGACNSPP----NLVIISQYMPFGS 273 (448)
T ss_pred Ccchhhhhhhhhh--cchhhcchhhhhCcceeeecCCchhhhhhhccCCC----CceEeeeeccchH
Confidence 3456677776643 23345567888999999999999999999998874 7889999999885
No 409
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=97.89 E-value=0.00016 Score=41.18 Aligned_cols=61 Identities=21% Similarity=0.288 Sum_probs=47.0
Q ss_pred eEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCc-ceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 7 VEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHP-NIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 7 ~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~Hp-nIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
..+|+|.+..... ........+.+|+.+++.+.|+ +|+++.+.+... ...+++++++.+++
T Consensus 23 ~~~~~k~~~~~~~-~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~----~~~~~~~~~~~~~~ 84 (384)
T COG0515 23 KLVALKVLAKKLE-SKSKEVERFLREIQILASLNHPPNIVKLYDFFQDE----GSLYLVMEYVDGGS 84 (384)
T ss_pred cEEEEEeechhhc-cchhHHHHHHHHHHHHHHccCCcceeeEEEEEecC----CEEEEEEecCCCCc
Confidence 3578888876432 1212577899999999999988 799999999655 35799999999875
No 410
>KOG1266|consensus
Probab=97.72 E-value=7.5e-07 Score=54.20 Aligned_cols=71 Identities=66% Similarity=1.042 Sum_probs=49.5
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCC-CCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHN-DKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~-~~~~~~lv~E~~~~Gs 72 (72)
|++.|.+|.|..++...++......++...=+.-|-.+.|-|||+++.+|.+..- +...+.+++|||+.|+
T Consensus 87 d~e~g~evvwneVq~~~rK~~~~qeek~~~vFdnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs 158 (458)
T KOG1266|consen 87 DTEEGVEVVWNEVQFSERKNPKEQEEKRRAVFDNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGS 158 (458)
T ss_pred hhccCchhhHHHHHHHHhcChhhCHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchh
Confidence 5677888888877765443333333333334456777889999999999987532 3456889999999885
No 411
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=97.71 E-value=0.00012 Score=40.93 Aligned_cols=61 Identities=16% Similarity=0.074 Sum_probs=38.8
Q ss_pred ccceEEEEEEEEeccccCc------------------hHHHHHHHHHHHHHhcCCCcc--eeeeeeeeeeCCCCCCeEEE
Q psy8984 4 EEGVEVVWNEVQFSERKNF------------------KAQEEKIQQVFENLTQLEHPN--IVKFHRYWTDTHNDKPRARF 63 (72)
Q Consensus 4 ~~g~~vAiK~i~~~~~~~~------------------~~~~~~~~~Ei~~l~~l~Hpn--Iv~l~~~~~~~~~~~~~~~l 63 (72)
.+|+.||+|.++....... ........+|+.++..+.|++ +...++ .. ..++
T Consensus 37 ~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~v~~~~~---~~-----~~~l 108 (198)
T cd05144 37 PDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGFPVPKPID---WN-----RHAV 108 (198)
T ss_pred CCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCCCCCceee---cC-----CceE
Confidence 3688999999875320000 001224678999999998874 333332 12 4589
Q ss_pred EEEecCCCC
Q psy8984 64 LGEYEETPT 72 (72)
Q Consensus 64 v~E~~~~Gs 72 (72)
+|||++|++
T Consensus 109 v~e~~~g~~ 117 (198)
T cd05144 109 VMEYIDGVE 117 (198)
T ss_pred EEEEeCCcc
Confidence 999999874
No 412
>KOG1345|consensus
Probab=97.60 E-value=3.8e-05 Score=45.98 Aligned_cols=62 Identities=13% Similarity=0.205 Sum_probs=48.0
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcC-CCcceeeeeee-eeeCCCCCCeEEEEEEecCCCC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRY-WTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~-~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
++.+...+++|-+... ......|.||..---.| .|.||+.-|++ |++. ..+.+++|||+.|+
T Consensus 45 Hr~s~t~ivlKavp~p-----~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~----d~YvF~qE~aP~gd 108 (378)
T KOG1345|consen 45 HRQSKTRIVLKAVPRP-----QTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTS----DAYVFVQEFAPRGD 108 (378)
T ss_pred ccCCceEEEeeccCcc-----hhhHHHHHHHhccceeeccchhhhHHHHHHhhcC----ceEEEeeccCccch
Confidence 5677888999988653 34667899999866666 69999998886 5554 37788999999885
No 413
>KOG0670|consensus
Probab=97.51 E-value=6.5e-05 Score=48.34 Aligned_cols=58 Identities=16% Similarity=0.159 Sum_probs=45.8
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCC------CcceeeeeeeeeeCCCCCCeEEEEEEec
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLE------HPNIVKFHRYWTDTHNDKPRARFLGEYE 68 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~------HpnIv~l~~~~~~~~~~~~~~~lv~E~~ 68 (72)
|...|..||||+|+.. .-..+.=++|+++|++|+ --|+++|+..|... +.++||+|-+
T Consensus 453 D~~r~~~vAiKIIRnN-----E~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hk----nHLClVFE~L 516 (752)
T KOG0670|consen 453 DQARGQEVAIKIIRNN-----EVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHK----NHLCLVFEPL 516 (752)
T ss_pred ccCCCCeeEEEEeecc-----hHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhc----ceeEEEehhh
Confidence 5666789999999853 344556689999999996 23899999998876 4899999855
No 414
>KOG1167|consensus
Probab=97.50 E-value=0.00013 Score=45.28 Aligned_cols=56 Identities=18% Similarity=0.248 Sum_probs=46.7
Q ss_pred cceEEEEEEEEeccccCchHHHHHHHHHHHHHhcC-CCcceeeeeeeeeeCCCCCCeEEEEEEecCC
Q psy8984 5 EGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHNDKPRARFLGEYEET 70 (72)
Q Consensus 5 ~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~ 70 (72)
....||+|.+... +...++.+|+++|..+ .+.||+++.+++...+ .+.+|+||++.
T Consensus 63 ~~~~valk~i~~t------s~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd----~v~ivlp~~~H 119 (418)
T KOG1167|consen 63 KRRYVALKAIYRT------SSPSRILNELEMLYRLGGSDNIIKLNGCFRNND----QVAIVLPYFEH 119 (418)
T ss_pred ccceEeeeecccc------cCchHHHHHHHHHHHhccchhhhcchhhhccCC----eeEEEecccCc
Confidence 5678999999753 2345689999999998 6999999999998774 89999999864
No 415
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=97.48 E-value=0.00071 Score=39.20 Aligned_cols=66 Identities=20% Similarity=0.029 Sum_probs=41.3
Q ss_pred ceEEEEEEEEeccc---------cCchHHHHHHHHHHHHHhcCCCcce--eeeeeeeeeCCCCCCeEEEEEEecCCC
Q psy8984 6 GVEVVWNEVQFSER---------KNFKAQEEKIQQVFENLTQLEHPNI--VKFHRYWTDTHNDKPRARFLGEYEETP 71 (72)
Q Consensus 6 g~~vAiK~i~~~~~---------~~~~~~~~~~~~Ei~~l~~l~HpnI--v~l~~~~~~~~~~~~~~~lv~E~~~~G 71 (72)
|..+|+|....... .........+.+|+.++..|.|++| ++.+++...........++|||+++|+
T Consensus 55 ~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~~~~~~~~lV~e~l~G~ 131 (239)
T PRK01723 55 GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRHGLFYRADILIERIEGA 131 (239)
T ss_pred CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeecCcceeeeEEEEecCCC
Confidence 56788888754211 0011234678899999999998875 677776443321011235999999874
No 416
>KOG0664|consensus
Probab=97.42 E-value=1.9e-06 Score=51.56 Aligned_cols=66 Identities=14% Similarity=0.154 Sum_probs=47.0
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCC-CCeEEEEEEecC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHND-KPRARFLGEYEE 69 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~-~~~~~lv~E~~~ 69 (72)
|..+|+.||.|++..- ......-+.+.||+.+|..++|.||+..++.......+ -.++|.++|+|.
T Consensus 74 DPRdgrrvalkK~pnv--fq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~TELmQ 140 (449)
T KOG0664|consen 74 DPRSGKRVALKKMPNV--FQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLTELMQ 140 (449)
T ss_pred CCCCccchhHhhcchH--HHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHHHHHH
Confidence 6788999999988642 12333557788999999999999999999987654211 113567777653
No 417
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=97.32 E-value=0.00034 Score=44.95 Aligned_cols=29 Identities=7% Similarity=-0.016 Sum_probs=17.1
Q ss_pred CcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 41 HPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 41 HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+.+.+.+-.++.+-. ..-+|||||++|++
T Consensus 219 ~~~~v~VP~v~~d~s---t~~VLvmE~i~G~~ 247 (537)
T PRK04750 219 DSDMLYVPEVYWDYC---SETVMVMERMYGIP 247 (537)
T ss_pred CCCCeecceeecccC---CCceEEEeeecCcc
Confidence 444444444443321 24579999999974
No 418
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=97.22 E-value=0.00045 Score=38.57 Aligned_cols=63 Identities=11% Similarity=0.061 Sum_probs=40.2
Q ss_pred ceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCC--cceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 6 GVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEH--PNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 6 g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~H--pnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
|..+++|....... ......+.+|..+++.+.+ .++.+++.+..... .....++||||++|++
T Consensus 22 g~~~ilK~~~~~~~---~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~-~~~~~~~v~e~i~G~~ 86 (223)
T cd05154 22 GRRLVLRRPPPGAL---LPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPS-VLGTPFYVMERVDGRV 86 (223)
T ss_pred CcceEEEeCCCccc---CcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCC-ccCCceEEEEEeCCEe
Confidence 56788887654321 1134567899999999865 34566666654321 0124689999998863
No 419
>KOG3741|consensus
Probab=97.21 E-value=0.00044 Score=44.60 Aligned_cols=64 Identities=17% Similarity=0.213 Sum_probs=44.2
Q ss_pred cccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCC
Q psy8984 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEET 70 (72)
Q Consensus 3 ~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~ 70 (72)
..+|..|.+|++.-. +..+ ..+...-+++.+++.|+|||++.++|.+...+...+.+|++|.++
T Consensus 298 ~~DG~~YvLkRlhg~-r~~~---~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~ 361 (655)
T KOG3741|consen 298 NVDGNAYVLKRLHGD-RDQS---TNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPS 361 (655)
T ss_pred ccCCceeeeeeeccc-cccC---cccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCC
Confidence 456888999998432 1111 122334478899999999999999987432222468999999875
No 420
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=97.15 E-value=0.0019 Score=40.52 Aligned_cols=41 Identities=12% Similarity=0.097 Sum_probs=22.2
Q ss_pred HHHHHHHHhcC----CCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 29 IQQVFENLTQL----EHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 29 ~~~Ei~~l~~l----~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
+.+|...+..+ +|.+-+..-.++.+-. ..-+|||||++|++
T Consensus 200 f~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~---~~~vLvmE~i~G~~ 244 (437)
T TIGR01982 200 LRREAANASELGENFKNDPGVYVPEVYWDRT---SERVLTMEWIDGIP 244 (437)
T ss_pred HHHHHHHHHHHHHhcCCCCCEEeCCEehhhc---CCceEEEEeECCcc
Confidence 34455544443 3333344444443321 24689999999874
No 421
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=97.01 E-value=0.0022 Score=35.21 Aligned_cols=34 Identities=21% Similarity=0.245 Sum_probs=19.9
Q ss_pred HHHHHHHhcCCCcc--eeeeeeeeeeCCCCCCeEEEEEEecCCC
Q psy8984 30 QQVFENLTQLEHPN--IVKFHRYWTDTHNDKPRARFLGEYEETP 71 (72)
Q Consensus 30 ~~Ei~~l~~l~Hpn--Iv~l~~~~~~~~~~~~~~~lv~E~~~~G 71 (72)
..|...+..+.+.. +.+.+++ . ..+++|||++||
T Consensus 65 ~~e~~~l~~l~~~~~~~~~~~~~---~-----~~~lv~e~~~g~ 100 (187)
T cd05119 65 EKEFRNLKRLYEAGVPVPKPIDL---N-----RHVLVMEFIGGD 100 (187)
T ss_pred HHHHHHHHHHHHcCCCCCceEec---C-----CCEEEEEEeCCC
Confidence 35566666654432 3333332 1 358999999985
No 422
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=97.00 E-value=0.00086 Score=36.15 Aligned_cols=57 Identities=12% Similarity=-0.017 Sum_probs=35.7
Q ss_pred cceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCccee-eeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 5 EGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIV-KFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 5 ~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv-~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
.|..|++|...... .....+.+|+.+++.+.+.+++ +++... .. .-++||||++|.+
T Consensus 20 ~~~~~~lK~~~~~~-----~~~~~~~~E~~~l~~l~~~~~~P~~~~~~-~~-----~~~lv~e~i~G~~ 77 (170)
T cd05151 20 ANKKYVVRIPGNGT-----ELLINRENEAENSKLAAEAGIGPKLYYFD-PE-----TGVLITEFIEGSE 77 (170)
T ss_pred CCeEEEEEeCCCCc-----ccccCHHHHHHHHHHHHHhCCCCceEEEe-CC-----CCeEEEEecCCCc
Confidence 36678988764321 1123457899999888655543 454443 21 3479999999864
No 423
>KOG0671|consensus
Probab=96.75 E-value=0.00073 Score=41.85 Aligned_cols=59 Identities=15% Similarity=0.152 Sum_probs=44.1
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCC--Cc----ceeeeeeeeeeCCCCCCeEEEEEEecC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLE--HP----NIVKFHRYWTDTHNDKPRARFLGEYEE 69 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~--Hp----nIv~l~~~~~~~~~~~~~~~lv~E~~~ 69 (72)
|.+++..||+|+++.- ..-++..+-|+++|+++. -| -+|++.++|.-. +.++||+|.+.
T Consensus 110 D~~~~~~vAlKIik~V-----~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyr----ghiCivfellG 174 (415)
T KOG0671|consen 110 DRETKEHVALKIIKNV-----DKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYR----GHICIVFELLG 174 (415)
T ss_pred ecCCCceehHHHHHHH-----HHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhcc----CceEEEEeccC
Confidence 6677889999998642 345667788999999993 23 367777777654 48999999874
No 424
>PLN02876 acyl-CoA dehydrogenase
Probab=96.27 E-value=0.013 Score=39.54 Aligned_cols=45 Identities=22% Similarity=0.287 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHhcCC-Ccce--eeeeeeeeeCCCCCCeEEEEEEecCCC
Q psy8984 26 EEKIQQVFENLTQLE-HPNI--VKFHRYWTDTHNDKPRARFLGEYEETP 71 (72)
Q Consensus 26 ~~~~~~Ei~~l~~l~-HpnI--v~l~~~~~~~~~~~~~~~lv~E~~~~G 71 (72)
...+.+|..+|+.+. |++| .+.+.++.+... ....|+||||++|-
T Consensus 82 ~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v-~G~~flVME~v~G~ 129 (822)
T PLN02876 82 AHAVEREYQVLRALGEHTDVPVPKVYCLCTDASV-IGTAFYIMEYLEGR 129 (822)
T ss_pred HHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCc-CCCceEEEEecCCc
Confidence 346889999999995 6765 677777655311 12468999999874
No 425
>KOG1023|consensus
Probab=96.07 E-value=0.0054 Score=39.19 Aligned_cols=33 Identities=33% Similarity=0.406 Sum_probs=29.6
Q ss_pred HhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 36 LTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 36 l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
|+.+.|.|+.+++|.+.+. +.+++|.+||..||
T Consensus 1 l~~l~h~n~~~f~g~~~~~----~~~~~i~~~c~rGs 33 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDG----PEMIVIWEYCSRGS 33 (484)
T ss_pred CcccchhhhhhheeeEecC----CceEEEEeeecCcc
Confidence 5678999999999999887 48999999999986
No 426
>KOG0603|consensus
Probab=95.64 E-value=0.0023 Score=41.69 Aligned_cols=63 Identities=13% Similarity=0.119 Sum_probs=47.4
Q ss_pred ccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCC-CcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 4 EEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLE-HPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 4 ~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~-HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
..|..+|+|.+.+..... ........|-.++...+ ||.+|+++..+..+ ..+|++++|..||.
T Consensus 20 da~~~yamkvl~k~t~~~--~~~~~t~~er~il~~~~~~~f~v~lhyafqt~----~kl~l~ld~~rgg~ 83 (612)
T KOG0603|consen 20 DAGHLYAMKVLKKATLKV--RDRTHTKQERIILAFVHNTPFLVKLHYAFQTD----GKLYLILDFLRGGD 83 (612)
T ss_pred cccchhhhhccccccccc--ccccccccHHHHHhhccCCCceeeeeeeeccc----cchhHhhhhcccch
Confidence 356678999887654321 12225566888888886 99999999999887 48999999998873
No 427
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=95.52 E-value=0.14 Score=28.95 Aligned_cols=36 Identities=25% Similarity=0.294 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHhcCCCc--ceeeeeeeeeeCCCCCCeEEEEEEecC
Q psy8984 26 EEKIQQVFENLTQLEHP--NIVKFHRYWTDTHNDKPRARFLGEYEE 69 (72)
Q Consensus 26 ~~~~~~Ei~~l~~l~Hp--nIv~l~~~~~~~~~~~~~~~lv~E~~~ 69 (72)
.....+|.+.|..+.-- ++.+.+++ .. -.|||||++
T Consensus 52 ~~~~~~E~~~L~~l~~~Gv~vP~p~~~--~~------~~ivME~I~ 89 (188)
T PF01163_consen 52 REWAKKEFRNLKRLYEAGVPVPKPYDY--NR------NVIVMEYIG 89 (188)
T ss_dssp HHHHHHHHHHHHHCCCTT-SS--EEEE--ET------TEEEEE--E
T ss_pred HHHHHHHHHHHHHHHHCCccCCcEEEE--eC------CEEEEEecC
Confidence 45678999999999654 67777655 22 269999998
No 428
>PHA02882 putative serine/threonine kinase; Provisional
Probab=95.08 E-value=0.24 Score=29.12 Aligned_cols=39 Identities=15% Similarity=0.077 Sum_probs=25.3
Q ss_pred HHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecC
Q psy8984 31 QVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEE 69 (72)
Q Consensus 31 ~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~ 69 (72)
++...+..++|+||+++++++..........++++|++.
T Consensus 72 ~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (294)
T PHA02882 72 ALWKNIHNIDHLGIPKYYGCGSFKRCRMYYRFILLEKLV 110 (294)
T ss_pred HHHHHhccCCCCCCCcEEEeeeEecCCceEEEEEEehhc
Confidence 344566778999999999987654311112367777653
No 429
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=94.97 E-value=0.038 Score=35.93 Aligned_cols=14 Identities=21% Similarity=0.228 Sum_probs=12.0
Q ss_pred CeEEEEEEecCCCC
Q psy8984 59 PRARFLGEYEETPT 72 (72)
Q Consensus 59 ~~~~lv~E~~~~Gs 72 (72)
..+++||||+.+|+
T Consensus 208 ~~~~LV~ey~~~gs 221 (566)
T PLN03225 208 DEYWLVWRYEGEST 221 (566)
T ss_pred CceEEEEEecCCCc
Confidence 47899999999875
No 430
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=94.95 E-value=0.26 Score=28.15 Aligned_cols=34 Identities=6% Similarity=0.086 Sum_probs=24.4
Q ss_pred HHHHHHHhcCC--CcceeeeeeeeeeCCCCCCeEEEEEEecCCC
Q psy8984 30 QQVFENLTQLE--HPNIVKFHRYWTDTHNDKPRARFLGEYEETP 71 (72)
Q Consensus 30 ~~Ei~~l~~l~--HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~G 71 (72)
.+|+..|+++. .-++.+.+++ . .-+|||||+.++
T Consensus 74 ~kE~r~L~rl~~~Gv~vP~pi~~--~------~~~lvME~Ig~~ 109 (197)
T cd05146 74 EKEMHNLKRMQKAGIPCPEVVVL--K------KHVLVMSFIGDD 109 (197)
T ss_pred HHHHHHHHHHHHcCCCCCeEEEe--c------CCEEEEEEcCCC
Confidence 38999999884 3567777764 2 247899999763
No 431
>KOG1024|consensus
Probab=94.16 E-value=0.24 Score=31.70 Aligned_cols=46 Identities=15% Similarity=0.006 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 24 AQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 24 ~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
-....+++|..+|..++|||+.+..++..... ...+.++.++.-|+
T Consensus 329 iQv~~~L~es~lly~~sH~nll~V~~V~ie~~---~~P~V~y~~~~~gN 374 (563)
T KOG1024|consen 329 IQVNLLLQESMLLYGASHPNLLSVLGVSIEDY---ATPFVLYPATGVGN 374 (563)
T ss_pred HHHHHHHHHHHHHhcCcCCCccceeEEEeecc---CcceEEEeccCcch
Confidence 34567889999999999999999999886542 35567777766553
No 432
>KOG0576|consensus
Probab=93.99 E-value=0.023 Score=38.00 Aligned_cols=39 Identities=15% Similarity=0.188 Sum_probs=30.8
Q ss_pred HHHHHHHHhcCCCcc-eeeeeeeeeeCCCCCCeEEEEEEecCCC
Q psy8984 29 IQQVFENLTQLEHPN-IVKFHRYWTDTHNDKPRARFLGEYEETP 71 (72)
Q Consensus 29 ~~~Ei~~l~~l~Hpn-Iv~l~~~~~~~~~~~~~~~lv~E~~~~G 71 (72)
..-++++|.+++||| .+..++.+..+ ...++.|++|.+|
T Consensus 280 ~rl~~eLLdK~n~P~~~v~~~~d~~~E----~~~~i~~~i~s~~ 319 (829)
T KOG0576|consen 280 RRLAIELLDKVNNPNPVVRYLEDYDGE----DYLWIPMRICSTG 319 (829)
T ss_pred hHHHHHHHHHccCCCCcccccccCCcc----cccchhhhhhcCC
Confidence 345789999999999 66766666554 3689999999887
No 433
>KOG1033|consensus
Probab=93.24 E-value=0.014 Score=37.50 Aligned_cols=47 Identities=13% Similarity=0.382 Sum_probs=38.6
Q ss_pred ceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeeeCC
Q psy8984 6 GVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTDTH 55 (72)
Q Consensus 6 g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~ 55 (72)
+-.+|||+|.+.. ......+..+|..-+..+.||+++++...|...+
T Consensus 74 ~~~~avkritlkn---~e~s~~rvl~~~~s~a~feh~g~~~~~ha~~~~~ 120 (516)
T KOG1033|consen 74 ENKYAVKRITLKN---REESRSRVLREVSSLAEFEHPGIKRYFHAWYERP 120 (516)
T ss_pred chhhHHHHhcccc---hhhhhhhhhccccchhhhcccchhhheeceecCC
Confidence 3368999998763 4556778899999999999999999999987654
No 434
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=92.83 E-value=0.58 Score=26.96 Aligned_cols=40 Identities=15% Similarity=0.144 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHhcCCCc--ceeeeeeeeeeCCCCCCeEEEEEEecCCC
Q psy8984 26 EEKIQQVFENLTQLEHP--NIVKFHRYWTDTHNDKPRARFLGEYEETP 71 (72)
Q Consensus 26 ~~~~~~Ei~~l~~l~Hp--nIv~l~~~~~~~~~~~~~~~lv~E~~~~G 71 (72)
..+..+|..+|..+.-- ++..++++ +++ ...|+|||.+|-
T Consensus 43 r~Rt~~Earil~~a~~~GV~~P~v~dv--D~~----~~~I~me~I~G~ 84 (204)
T COG3642 43 RERTRREARILAKAREAGVPVPIVYDV--DPD----NGLIVMEYIEGE 84 (204)
T ss_pred HHHHHHHHHHHHHHHHcCCCCCeEEEE--cCC----CCEEEEEEeCCh
Confidence 45678899999887533 34444444 442 567999999873
No 435
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=91.64 E-value=0.4 Score=27.50 Aligned_cols=41 Identities=20% Similarity=0.151 Sum_probs=28.3
Q ss_pred HHHHHHHHHHhcCC-CcceeeeeeeeeeCCCCCCeEEEEEEecCCC
Q psy8984 27 EKIQQVFENLTQLE-HPNIVKFHRYWTDTHNDKPRARFLGEYEETP 71 (72)
Q Consensus 27 ~~~~~Ei~~l~~l~-HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~G 71 (72)
..+.+|+.+++.+. +--+.+++++.... ..-++|||+++|.
T Consensus 36 ~~~~~E~~~l~~l~~~~~vP~v~~~~~~~----~~~~lv~e~i~G~ 77 (244)
T cd05150 36 YELEREAERLRWLAGKLPVPEVIDYGSDD----GRAWLLTSAVPGV 77 (244)
T ss_pred cchHHHHHHHHHHHhcCCCCeEEEEEecC----CccEEEEEeeCCc
Confidence 34678998888773 34455677766543 2568999999874
No 436
>KOG0590|consensus
Probab=91.62 E-value=0.041 Score=36.12 Aligned_cols=60 Identities=12% Similarity=0.102 Sum_probs=43.3
Q ss_pred eEEEEEEEEeccccCchHHHHHHHHHHHHHhcCC-CcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 7 VEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLE-HPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 7 ~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~-HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
..+|.|.+.... ........+..|..+-+.+. |+|++.+++...+.+ ..+++++|.+||+
T Consensus 47 ~~~a~~~~s~~~--~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~----~~~~~~~~s~g~~ 107 (601)
T KOG0590|consen 47 SSSATKPISIPP--KSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPR----SYLLSLSYSDGGS 107 (601)
T ss_pred ceeeccCCCCCC--CccchhhhcCccccccccccccccccccCCccCCCc----ccccccCcccccc
Confidence 346666655432 12334556667888888886 999999999987763 7899999988874
No 437
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=91.61 E-value=0.39 Score=27.72 Aligned_cols=41 Identities=15% Similarity=0.049 Sum_probs=28.6
Q ss_pred HHHHHHHHHHhcCCCc--ceeeeeeeeeeCCCCCCeEEEEEEecCCC
Q psy8984 27 EKIQQVFENLTQLEHP--NIVKFHRYWTDTHNDKPRARFLGEYEETP 71 (72)
Q Consensus 27 ~~~~~Ei~~l~~l~Hp--nIv~l~~~~~~~~~~~~~~~lv~E~~~~G 71 (72)
..+.+|.++++.+..- .+.+.+++..+. ....+|||+++|.
T Consensus 37 ~~i~~E~~~l~~l~~~glpvP~~~~~~~~~----~~~glv~e~i~G~ 79 (226)
T TIGR02172 37 ETIKREFDASRKVFSLGIPTPHPFDLVEDG----GRLGLIYELIVGK 79 (226)
T ss_pred HHHHHHHHHHHHHHHcCCCCCceEEEEecC----CeeeeeeeecCCc
Confidence 4578899999887532 245666665554 3578899999984
No 438
>PRK10593 hypothetical protein; Provisional
Probab=91.55 E-value=0.45 Score=28.57 Aligned_cols=45 Identities=16% Similarity=-0.022 Sum_probs=31.0
Q ss_pred HHHHHHHHHHhcCCC---cceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 27 EKIQQVFENLTQLEH---PNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 27 ~~~~~Ei~~l~~l~H---pnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
..+.+|...|+.|.- -.|.+.++++.++.. ...-+||||+++|++
T Consensus 52 ~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~-~g~~~LVmE~i~G~~ 99 (297)
T PRK10593 52 GVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQS-PGPDVLLLERLRGVS 99 (297)
T ss_pred hHHHHHHHHHHHHccCCCCCcCcEEEEeccCCc-CCCeEEEEeccCCEe
Confidence 578899998887742 357777776654310 135799999999863
No 439
>KOG0601|consensus
Probab=91.55 E-value=0.066 Score=34.75 Aligned_cols=63 Identities=14% Similarity=-0.029 Sum_probs=44.5
Q ss_pred ccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcC-CCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 4 EEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 4 ~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
.++..||+|.+.... ........-..|+-+...+ .|.++++++..|.... ..|+=-|||++|+
T Consensus 289 ~~~~~Y~~ke~~~~l--~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r----~~~ip~e~~~~~s 352 (524)
T KOG0601|consen 289 EGDCIYAAKELLNGL--ATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLR----QGYIPLEFCEGGS 352 (524)
T ss_pred CCCceEeChhhhccc--cchHhhhcchhhhhHhhHhhcccccCCCCCCccccc----cccCchhhhcCcc
Confidence 567788888876531 1122233345677777766 6999999999997763 6788899998875
No 440
>KOG1164|consensus
Probab=91.11 E-value=0.68 Score=27.90 Aligned_cols=55 Identities=9% Similarity=-0.062 Sum_probs=37.7
Q ss_pred eEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCC----cceeeeeeeee-eCCCCCCeEEEEEEecC
Q psy8984 7 VEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEH----PNIVKFHRYWT-DTHNDKPRARFLGEYEE 69 (72)
Q Consensus 7 ~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~H----pnIv~l~~~~~-~~~~~~~~~~lv~E~~~ 69 (72)
..+|+|....... .....+..|..++..+.. +++..+++... .. ..-||||+.+.
T Consensus 45 ~~~a~K~e~~~~~----~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~----~~~~iVM~l~G 104 (322)
T KOG1164|consen 45 KEYAKKLEKKELG----SKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTE----DFNFIVMSLLG 104 (322)
T ss_pred eeEEEEEEEeccc----CCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCC----ceeEEEEeccC
Confidence 5688887765421 111257788888888863 58899998884 43 36789998763
No 441
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=90.15 E-value=0.53 Score=27.00 Aligned_cols=53 Identities=15% Similarity=0.137 Sum_probs=34.0
Q ss_pred cceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCccee-eeeeeeeeCCCCCCeEEEEEEecCCC
Q psy8984 5 EGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIV-KFHRYWTDTHNDKPRARFLGEYEETP 71 (72)
Q Consensus 5 ~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv-~l~~~~~~~~~~~~~~~lv~E~~~~G 71 (72)
.|..+|+|.=+. .+.+..+..|.++|..+.--++- ++|.+ + ..++.|||+.|-
T Consensus 44 ~~~~~a~Kvrr~------ds~r~~l~kEakiLeil~g~~~~p~vy~y--g------~~~i~me~i~G~ 97 (201)
T COG2112 44 RGGEVALKVRRR------DSPRRNLEKEAKILEILAGEGVTPEVYFY--G------EDFIRMEYIDGR 97 (201)
T ss_pred cCceEEEEEecC------CcchhhHHHHHHHHHHhhhcCCCceEEEe--c------hhhhhhhhhcCc
Confidence 456788886443 24456788999999888755544 34433 2 234569999873
No 442
>KOG3087|consensus
Probab=89.33 E-value=1.7 Score=25.37 Aligned_cols=61 Identities=13% Similarity=0.077 Sum_probs=35.0
Q ss_pred cceEEEEEEEEeccccCch-----HHHHHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCC
Q psy8984 5 EGVEVVWNEVQFSERKNFK-----AQEEKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEET 70 (72)
Q Consensus 5 ~g~~vAiK~i~~~~~~~~~-----~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~ 70 (72)
+|+.+.||.=..... ..+ -...+.++|+.+|.++.---|.--.=+|.|.. .-.|+|||++|
T Consensus 29 ~Ge~~iIK~Rf~K~Y-RHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~----~~~i~ME~~~g 94 (229)
T KOG3087|consen 29 SGEAAIIKERFSKRY-RHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTY----GGQIYMEFIDG 94 (229)
T ss_pred CCceeEEeecccccc-cchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecC----CCeEEEEeccc
Confidence 466666765322211 122 24667889999998875433333333344442 34678999987
No 443
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=87.52 E-value=4.1 Score=24.32 Aligned_cols=43 Identities=7% Similarity=0.027 Sum_probs=23.6
Q ss_pred HHHHHHHHHhcCCCcc--eeeeeeeeeeCCCC-CCeEEEEEEecCC
Q psy8984 28 KIQQVFENLTQLEHPN--IVKFHRYWTDTHND-KPRARFLGEYEET 70 (72)
Q Consensus 28 ~~~~Ei~~l~~l~Hpn--Iv~l~~~~~~~~~~-~~~~~lv~E~~~~ 70 (72)
.+.+|...+..|.--. +.....+.+...++ ....++|||++++
T Consensus 74 ~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVte~l~~ 119 (268)
T PRK15123 74 GADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIITEDLAP 119 (268)
T ss_pred HHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEEeeCCC
Confidence 4778988776663222 22333333322111 2357899999976
No 444
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=87.41 E-value=2.1 Score=25.83 Aligned_cols=57 Identities=16% Similarity=0.064 Sum_probs=30.7
Q ss_pred ccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCC---CcceeeeeeeeeeCCCCCCeEEEEEEecCCC
Q psy8984 4 EEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLE---HPNIVKFHRYWTDTHNDKPRARFLGEYEETP 71 (72)
Q Consensus 4 ~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~---HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~G 71 (72)
.++..+-+|.-.. .....+..|..-|+.|. --.+.+.+.+....+ .-||||||++.+
T Consensus 38 ~~~~~~FvK~~~~-------~~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~----~~fLlle~l~~~ 97 (288)
T PF03881_consen 38 TDGGSYFVKVNSE-------SGRDMFEGEAEGLKALAEANPIRVPKVIAWGEYDD----DAFLLLEFLEMG 97 (288)
T ss_dssp TTS-EEEEEEEEG-------GGCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SS----CCEEEEE-----
T ss_pred CCCccEEEEecCh-------hhHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecC----CceEEEEeecCC
Confidence 3466778886652 22345777887777662 335667777765543 458999999865
No 445
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=87.21 E-value=1.2 Score=25.09 Aligned_cols=34 Identities=15% Similarity=0.007 Sum_probs=25.9
Q ss_pred HHHHHHHhcCCC-cceeeeeeeeeeCCCCCCeEEEEEEecCCC
Q psy8984 30 QQVFENLTQLEH-PNIVKFHRYWTDTHNDKPRARFLGEYEETP 71 (72)
Q Consensus 30 ~~Ei~~l~~l~H-pnIv~l~~~~~~~~~~~~~~~lv~E~~~~G 71 (72)
..|.-+|+.+++ +++.+++|+|-. ++++||...|
T Consensus 7 ~~E~lll~~l~~~~~~pk~lG~CG~--------~~v~E~~~~~ 41 (188)
T PF12260_consen 7 NNEPLLLQLLQGSEPFPKLLGSCGR--------FYVVEYVGAG 41 (188)
T ss_pred ccHHHHHHHcCCCCCCCCeeeECCC--------EEEEEeecCc
Confidence 458888888876 699999999722 4588888754
No 446
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=86.51 E-value=3.9 Score=25.99 Aligned_cols=59 Identities=15% Similarity=0.047 Sum_probs=36.2
Q ss_pred eEEEEEEEEeccc---cCchHHHHHHHHHHHHHhcCC---CcceeeeeeeeeeCCCCCCeEEEEEEecCCC
Q psy8984 7 VEVVWNEVQFSER---KNFKAQEEKIQQVFENLTQLE---HPNIVKFHRYWTDTHNDKPRARFLGEYEETP 71 (72)
Q Consensus 7 ~~vAiK~i~~~~~---~~~~~~~~~~~~Ei~~l~~l~---HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~G 71 (72)
+.+.+|.-....+ ...+....+...|.+.|+.+. -.++.+++.+ +++ ..++|||++++.
T Consensus 52 ~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~--D~~----~~~lVME~L~~~ 116 (401)
T PRK09550 52 KSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHY--DEE----LAVTVMEDLSDH 116 (401)
T ss_pred eEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEE--CCC----CCEEEEecCCCc
Confidence 4788887431110 011234566778888887752 3467778777 332 468999999864
No 447
>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=85.02 E-value=5.4 Score=24.13 Aligned_cols=44 Identities=16% Similarity=0.059 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHHhcCC---CcceeeeeeeeeeCCCCCCeEEEEEEecCCC
Q psy8984 24 AQEEKIQQVFENLTQLE---HPNIVKFHRYWTDTHNDKPRARFLGEYEETP 71 (72)
Q Consensus 24 ~~~~~~~~Ei~~l~~l~---HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~G 71 (72)
.....+..|+.-|..+. --+|.+.+.+-.+. ...|+||||++.|
T Consensus 50 ~~~~~f~AEa~gL~~la~s~ti~VP~vi~~G~~~----~~sylVle~L~~~ 96 (286)
T COG3001 50 EQLSMFTAEADGLELLARSNTITVPKVIAVGASR----DHSYLVLEYLPTG 96 (286)
T ss_pred hhHHHHHHHHHHHHHHHhcCCccccceEEecCCC----CeeEEEEeeccCC
Confidence 44577888887665553 34455555554444 4789999999875
No 448
>KOG4158|consensus
Probab=84.08 E-value=0.37 Score=31.06 Aligned_cols=15 Identities=40% Similarity=0.837 Sum_probs=13.2
Q ss_pred CCcceeeeeeeeeeC
Q psy8984 40 EHPNIVKFHRYWTDT 54 (72)
Q Consensus 40 ~HpnIv~l~~~~~~~ 54 (72)
.|||||++..+|.+.
T Consensus 274 ~HPNIvri~~aF~ds 288 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDS 288 (598)
T ss_pred CCCCEEeehhhhhhh
Confidence 699999999998774
No 449
>KOG1163|consensus
Probab=83.14 E-value=1.4 Score=26.73 Aligned_cols=56 Identities=13% Similarity=0.064 Sum_probs=35.4
Q ss_pred cccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCc-ceeeeeeeeeeCCCCCCeEEEEEEec
Q psy8984 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHP-NIVKFHRYWTDTHNDKPRARFLGEYE 68 (72)
Q Consensus 3 ~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~Hp-nIv~l~~~~~~~~~~~~~~~lv~E~~ 68 (72)
..+|+.||||.=+... ...++..|..+-+.|+|- -|..+..+.... ..-.+|||+.
T Consensus 37 i~~ge~VAiK~Es~~a------~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~----~ynvlVMdLL 93 (341)
T KOG1163|consen 37 ITSGEEVAIKLESSKA------KHPQLLYESKVYRILQGGVGIPHIRHYGTEK----DYNVLVMDLL 93 (341)
T ss_pred ccCCceEEEEeecccC------CCcchhHHHHHHHHhccCCCCchhhhhcccc----ccceeeeecc
Confidence 4679999999754321 223467788877777653 455555554443 2457899976
No 450
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=82.99 E-value=6.1 Score=21.91 Aligned_cols=58 Identities=16% Similarity=0.056 Sum_probs=34.0
Q ss_pred eEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCc--ceeeeeeeeeeCCCCCCeEEEEEEecCCC
Q psy8984 7 VEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHP--NIVKFHRYWTDTHNDKPRARFLGEYEETP 71 (72)
Q Consensus 7 ~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~Hp--nIv~l~~~~~~~~~~~~~~~lv~E~~~~G 71 (72)
..+++|.... ......+.+|..+++.+... .+.+++....... .....+++|++++|.
T Consensus 21 ~~~vlK~~~~------~~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~-~~~~~~~~~~~i~g~ 80 (239)
T PF01636_consen 21 GRYVLKFYRP------PDAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDE-FNGFPYLLMEYIPGR 80 (239)
T ss_dssp SEEEEEEESS------HHHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETE-ETSEEEEEEEEESSE
T ss_pred cEEEEEEeCC------CCCHHHHHHHHHHHHHHHhcCCCCceEEeeccccc-ccccceEEEEEeccc
Confidence 3677776532 23556778898888877422 3556665433221 013478999999874
No 451
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=82.83 E-value=2.9 Score=23.75 Aligned_cols=53 Identities=9% Similarity=-0.047 Sum_probs=29.2
Q ss_pred ceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCC-CcceeeeeeeeeeCCCCCCeEEEEEEecCCC
Q psy8984 6 GVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLE-HPNIVKFHRYWTDTHNDKPRARFLGEYEETP 71 (72)
Q Consensus 6 g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~-HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~G 71 (72)
+..|.+|...... ...-...+|+.+++.+. +.-..+++..+ .. .++|||++|-
T Consensus 24 ~~~~vlR~~~~~~-----~~~~d~~~E~~~~~~l~~~gl~P~v~~~~--~~------~~l~e~i~G~ 77 (235)
T cd05157 24 QDAVLVRVYGNKT-----ELIIDRERELRIHKLLSKHGLAPKLYATF--QN------GLIYEFIPGR 77 (235)
T ss_pred CCeEEEEEccCCc-----cceecHHHHHHHHHHHHhCCCCCeEEEEe--CC------cEEEEeeCCC
Confidence 4567777554221 11122347888888774 33344444432 21 3799999874
No 452
>KOG0590|consensus
Probab=81.93 E-value=0.11 Score=34.26 Aligned_cols=38 Identities=24% Similarity=0.171 Sum_probs=29.7
Q ss_pred HHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCC
Q psy8984 29 IQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEET 70 (72)
Q Consensus 29 ~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~ 70 (72)
+..|..+-..|+|||++.....+.+.. ..+-.||||++
T Consensus 368 i~sE~~i~~~l~h~~~~e~l~~~~~~~----~~~~~mE~~~~ 405 (601)
T KOG0590|consen 368 ITSEFCIGSSLSHPNIIETLDIVQEID----GILQSMEYCPY 405 (601)
T ss_pred hhhheeecccccCCchhhhHHHHhhcc----cchhhhhcccH
Confidence 667888888999999998888776653 44455999976
No 453
>KOG3021|consensus
Probab=81.64 E-value=4.2 Score=24.44 Aligned_cols=45 Identities=7% Similarity=0.035 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHHhcCCCcceeee---eeeeeeCCCCCCeEEEEEEecCCC
Q psy8984 24 AQEEKIQQVFENLTQLEHPNIVKF---HRYWTDTHNDKPRARFLGEYEETP 71 (72)
Q Consensus 24 ~~~~~~~~Ei~~l~~l~HpnIv~l---~~~~~~~~~~~~~~~lv~E~~~~G 71 (72)
..++.|.-|+.-|..+..-+.|.. +.+..-+ ....++||||++-+
T Consensus 46 ~~~~mfeGE~~sLeAi~sT~tv~vprpikvid~p---~Ggs~lime~idf~ 93 (313)
T KOG3021|consen 46 IARDMFEGELASLEAIQSTETVLVPRPIKVIDLP---GGGSSLIMEHIDFQ 93 (313)
T ss_pred cchHHHhhHHHHHHHHHhcCceecCCceeeEecC---CCceeeeeehhhcc
Confidence 456678888877777665555543 3332222 24578999999754
No 454
>PLN02756 S-methyl-5-thioribose kinase
Probab=80.33 E-value=5.4 Score=25.60 Aligned_cols=39 Identities=13% Similarity=0.014 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHhcCC---CcceeeeeeeeeeCCCCCCeEEEEEEecCC
Q psy8984 26 EEKIQQVFENLTQLE---HPNIVKFHRYWTDTHNDKPRARFLGEYEET 70 (72)
Q Consensus 26 ~~~~~~Ei~~l~~l~---HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~ 70 (72)
..+...|...|+.+. -.++.+++.+..+ .-+++||++++
T Consensus 78 ~~R~~~Ea~aL~~~~~~~p~~VPkVy~~ded------~~vlvME~L~~ 119 (418)
T PLN02756 78 KERAYFEATALREHGRLCPDHVPEVYHFDRT------MALIGMRYLEP 119 (418)
T ss_pred ccHHHHHHHHHHHhhhcCCCCCCeEEEECCC------CCEEEEeecCC
Confidence 344555677776553 3478888888654 34788999976
No 455
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=78.03 E-value=2.9 Score=25.60 Aligned_cols=37 Identities=24% Similarity=0.254 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHhcCCCc--ceeeeeeeeeeCCCCCCeEEEEEEecCC
Q psy8984 26 EEKIQQVFENLTQLEHP--NIVKFHRYWTDTHNDKPRARFLGEYEET 70 (72)
Q Consensus 26 ~~~~~~Ei~~l~~l~Hp--nIv~l~~~~~~~~~~~~~~~lv~E~~~~ 70 (72)
+...++|.++|..|.-. .|.+.++. +.-.+||||++|
T Consensus 153 Rl~A~rEf~~L~~L~~~G~~VP~P~~~--------nRHaVvMe~ieG 191 (304)
T COG0478 153 RLAAEREFEALQRLYPEGVKVPKPIAW--------NRHAVVMEYIEG 191 (304)
T ss_pred HHHHHHHHHHHHHhhhcCCCCCCcccc--------ccceeeeehccc
Confidence 45678999999998644 56555543 244689999987
No 456
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=77.77 E-value=3.9 Score=23.73 Aligned_cols=35 Identities=20% Similarity=0.130 Sum_probs=21.3
Q ss_pred HHHHHHHHhcCCCcce-eeeeeeeeeCCCCCCeEEEEEEecCCC
Q psy8984 29 IQQVFENLTQLEHPNI-VKFHRYWTDTHNDKPRARFLGEYEETP 71 (72)
Q Consensus 29 ~~~Ei~~l~~l~HpnI-v~l~~~~~~~~~~~~~~~lv~E~~~~G 71 (72)
..+|..+++.+..-.+ .+++.. +. -++||||++|.
T Consensus 38 r~~E~~~l~~l~~~g~~P~~i~~--~~------~~~v~e~i~G~ 73 (256)
T TIGR02721 38 RQREYQILQALSALGLAPKPILV--NE------HWLLVEWLEGE 73 (256)
T ss_pred HHHHHHHHHHHHhcCCCCceEEE--eC------CEEEEEeccCc
Confidence 4678888888753222 233332 22 25899999874
No 457
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=77.40 E-value=8.6 Score=22.02 Aligned_cols=46 Identities=11% Similarity=-0.014 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHhcCCCc---ceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 26 EEKIQQVFENLTQLEHP---NIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 26 ~~~~~~Ei~~l~~l~Hp---nIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
...+.+|..+|+.+... -+.+.++.....+ .....|++|++++|.+
T Consensus 32 ~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~-~~~~~~~l~~~i~G~~ 80 (235)
T cd05155 32 AGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGE-GYPWPWSVYRWLEGET 80 (235)
T ss_pred HHHHHHHHHHHHHHhccCCCCCCceeecCCCcc-CCCcceEEEEeecCCC
Confidence 45788999998877421 2334443322211 0113478999998853
No 458
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=77.35 E-value=11 Score=21.56 Aligned_cols=41 Identities=12% Similarity=0.141 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHhcC------CCcceeeeeeeeeeCCCCCCeEEEEEEecCC
Q psy8984 26 EEKIQQVFENLTQL------EHPNIVKFHRYWTDTHNDKPRARFLGEYEET 70 (72)
Q Consensus 26 ~~~~~~Ei~~l~~l------~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~ 70 (72)
..+..+|+.-...+ .+.+|.+++|..++.. -+-+|+|.+..
T Consensus 55 ~~~~~~E~~~y~~l~~~~~~~~~~i~r~~G~veT~~----G~Glv~e~I~d 101 (199)
T PF10707_consen 55 YRQNRRELRYYKQLSLRRGVDWSHIPRFYGFVETNL----GLGLVVELIRD 101 (199)
T ss_pred hHHHHHHHHHHHHHhhccCCcccccccEeEEEecCC----ceEEEEEEEEC
Confidence 45667777554444 4889999999998863 56778887643
No 459
>KOG1093|consensus
Probab=75.91 E-value=5.7 Score=26.85 Aligned_cols=41 Identities=22% Similarity=0.310 Sum_probs=32.0
Q ss_pred HHHHHHHHHHhcCCCcceeeeeeeeeeCCCCCCeEEEEEEecCC
Q psy8984 27 EKIQQVFENLTQLEHPNIVKFHRYWTDTHNDKPRARFLGEYEET 70 (72)
Q Consensus 27 ~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~ 70 (72)
.+++--.++++.+.|+|..++.++-.... ....+|||+++.
T Consensus 27 ~~ilgr~~~lktl~~~~l~~yl~~~r~~~---~r~IVV~e~~~~ 67 (725)
T KOG1093|consen 27 IQILGRFQYLKSLQHDNLCQYLDFSRGKH---ERVIVVMEHYTM 67 (725)
T ss_pred HHHhhhhHHHHhhcCccceeeEeeecCcc---ceEEEEehhhcc
Confidence 34556678999999999999999876543 358899998863
No 460
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=75.46 E-value=9.3 Score=23.29 Aligned_cols=37 Identities=16% Similarity=0.164 Sum_probs=26.2
Q ss_pred CcccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcC
Q psy8984 2 DTEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL 39 (72)
Q Consensus 2 ~~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l 39 (72)
|.+||+.+|+|....... ......+.+++|.-....+
T Consensus 33 d~~t~~~~avkvf~~~~~-~~~~~~~~~~~e~l~~~~~ 69 (288)
T PF14531_consen 33 DVETGEEFAVKVFLLPAD-ASANEYEQLKEEQLAITLF 69 (288)
T ss_dssp ETTTTEEEEEEEEEESST-THTTHHHHHHHHHHGGGGS
T ss_pred EccCCceEEEEEEecccc-cchHHHHHHHHHHHHhhhh
Confidence 678999999999887642 3334677788777555554
No 461
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=75.01 E-value=4.2 Score=24.14 Aligned_cols=54 Identities=11% Similarity=-0.010 Sum_probs=30.5
Q ss_pred cceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCC-cceeeeeeeeeeCCCCCCeEEEEEEecCCC
Q psy8984 5 EGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEH-PNIVKFHRYWTDTHNDKPRARFLGEYEETP 71 (72)
Q Consensus 5 ~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~H-pnIv~l~~~~~~~~~~~~~~~lv~E~~~~G 71 (72)
++..+.+|..... ........+|..+++.+.. .-..+++.++. . .+|+||++|.
T Consensus 28 ~~~~~vlRi~~~~-----~~~~~~r~~E~~~~~~l~~~g~~P~~~~~~~-~-------~~v~e~i~G~ 82 (302)
T cd05156 28 EPRKVLLRVYGQS-----VELLIDRERELVVFARLSERNLGPKLYGIFP-N-------GRIEEFIPSR 82 (302)
T ss_pred CCCeEEEEEecCC-----CcceechHHHHHHHHHHHhCCCCCceEEEeC-C-------CchhheeCCC
Confidence 3567888875432 1122345778888777742 22334554432 1 2578998874
No 462
>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []. These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.
Probab=73.15 E-value=1.8 Score=22.58 Aligned_cols=13 Identities=23% Similarity=0.212 Sum_probs=10.2
Q ss_pred ccceEEEEEEEEe
Q psy8984 4 EEGVEVVWNEVQF 16 (72)
Q Consensus 4 ~~g~~vAiK~i~~ 16 (72)
.+|+.||||..+.
T Consensus 33 ~~g~~VaVKV~rP 45 (119)
T PF03109_consen 33 KDGEEVAVKVQRP 45 (119)
T ss_pred cccchhhhhhcch
Confidence 4589999998764
No 463
>KOG1235|consensus
Probab=71.69 E-value=3.6 Score=27.21 Aligned_cols=12 Identities=17% Similarity=0.163 Sum_probs=10.0
Q ss_pred eEEEEEEecCCC
Q psy8984 60 RARFLGEYEETP 71 (72)
Q Consensus 60 ~~~lv~E~~~~G 71 (72)
.-.|+||||+|.
T Consensus 276 ~RVLtME~~~G~ 287 (538)
T KOG1235|consen 276 KRVLTMEYVDGI 287 (538)
T ss_pred ceEEEEEecCCc
Confidence 457999999986
No 464
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=70.79 E-value=4.2 Score=26.72 Aligned_cols=13 Identities=23% Similarity=0.148 Sum_probs=10.6
Q ss_pred ccceEEEEEEEEe
Q psy8984 4 EEGVEVVWNEVQF 16 (72)
Q Consensus 4 ~~g~~vAiK~i~~ 16 (72)
.+|+.||||+.+.
T Consensus 147 ~sG~~VAVKVqrP 159 (517)
T COG0661 147 KSGEEVAVKVQRP 159 (517)
T ss_pred cCCCEEEEEecCC
Confidence 4699999998764
No 465
>PF07914 DUF1679: Protein of unknown function (DUF1679); InterPro: IPR012877 This region is found in a number of Caenorhabditis elegans and Caenorhabditis briggsae proteins, in one case (Q19034 from SWISSPROT) as a repeat. In many of the family members, this region is associated with the CHK region described by SMART as being found in zinc finger-C4 and HLH domain-containing kinases. In fact, one member of this family (Q9GUC1 from SWISSPROT) is annotated as being a member of the nuclear hormone receptor family, and contains regions typical of such proteins (IPR000536 from INTERPRO, IPR008946 from INTERPRO, and IPR001628 from INTERPRO).
Probab=70.19 E-value=11 Score=24.04 Aligned_cols=41 Identities=20% Similarity=0.349 Sum_probs=25.4
Q ss_pred HHH---HHHhcCCCcceeeeeeeeee--CCCCCCeEEEEEEecCCC
Q psy8984 31 QVF---ENLTQLEHPNIVKFHRYWTD--THNDKPRARFLGEYEETP 71 (72)
Q Consensus 31 ~Ei---~~l~~l~HpnIv~l~~~~~~--~~~~~~~~~lv~E~~~~G 71 (72)
||+ +++.+++||++.-..-|+.. .+.....-+|+|||+++.
T Consensus 115 rEv~~Y~~~~k~~~~~l~~PKvY~~k~f~~en~~kG~IimE~ven~ 160 (414)
T PF07914_consen 115 REVNFYKIFEKFNHPNLPYPKVYFGKKFDEENKLKGFIIMEYVENV 160 (414)
T ss_pred HHHHHHHHHHhcCCCCCCCCceeEEEecCCCCCCCCEEEEeccCCc
Confidence 666 46788889987754444322 110112469999999864
No 466
>PF11986 PB1-F2: Influenza A Proapoptotic protein; InterPro: IPR021045 PB1-F2 is a protein found in almost all known strains of Influenza A virus - a negative sense ssRNA Orthomyxovirus []. It originates from translation of the viral polymerase gene in an alternative reading frame []. PB1-F2 consists of two independent structural domains, two closely neighbouring short helices at the N terminus, and an extended C-terminal helix []. Although the protein has originally been described to induce apoptosis, it has now been shown that PB1-F2 more likely acts as an apoptosis promoter in concert with other apoptosis-inducing agents []. PB1-F2 promotes apoptosis by localising to the mitochondria where it destabilises the membrane. This will cause release of cytochrome C which activates the caspase cascade of apoptosis through the endogenous pathway []. In this way it acts like the Bcl-2 protein family which are physiological apoptotic regulators in cells [].; PDB: 2HN8_A 3BUY_C.
Probab=67.67 E-value=1.7 Score=21.42 Aligned_cols=19 Identities=26% Similarity=0.462 Sum_probs=0.0
Q ss_pred HHhcCCCcceeeeeeeeee
Q psy8984 35 NLTQLEHPNIVKFHRYWTD 53 (72)
Q Consensus 35 ~l~~l~HpnIv~l~~~~~~ 53 (72)
--.+|.|||.+++.+-|..
T Consensus 26 qtqrlehpns~~lmdhylr 44 (90)
T PF11986_consen 26 QTQRLEHPNSTQLMDHYLR 44 (90)
T ss_dssp -------------------
T ss_pred ccccccCccHHHHHHHHHH
Confidence 3457899999999987753
No 467
>KOG0601|consensus
Probab=66.89 E-value=2.4 Score=27.94 Aligned_cols=61 Identities=11% Similarity=0.083 Sum_probs=41.8
Q ss_pred cccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcC-CCcceeeeeeeeeeCCCCCCeEEEEEEecC
Q psy8984 3 TEEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHNDKPRARFLGEYEE 69 (72)
Q Consensus 3 ~~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~ 69 (72)
.+++..+|+|.=+..- ..+.....-.+|+...+.+ .|+|.++.+..|+..+ ..|+=+|+|.
T Consensus 140 ~~s~~~~a~k~s~~p~--s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~----~lfiqtE~~~ 201 (524)
T KOG0601|consen 140 SESPHKFAVKKSKIPF--SPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSG----ILFIQTELCG 201 (524)
T ss_pred ccCCcccccccccCCC--CCccccccccchhhcccccCccccccccCcccccCC----cceeeecccc
Confidence 4567788888733221 1112233446788887777 6999999999988763 7899999885
No 468
>KOG1240|consensus
Probab=66.12 E-value=18 Score=26.77 Aligned_cols=47 Identities=15% Similarity=0.183 Sum_probs=29.7
Q ss_pred cceEEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceeeeeeeeee
Q psy8984 5 EGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVKFHRYWTD 53 (72)
Q Consensus 5 ~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~ 53 (72)
.|. |++|++-+.+-..+.....+-++|++ .+.++|||.+.+.-+-..
T Consensus 46 eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t 92 (1431)
T KOG1240|consen 46 EGL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVT 92 (1431)
T ss_pred Cce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHh
Confidence 354 89998876532223334444455666 666799999988766444
No 469
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=62.45 E-value=26 Score=19.78 Aligned_cols=46 Identities=13% Similarity=0.145 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHhcCCCc--ceeeeeeeeeeCCCCCCeEEEEEEecCC
Q psy8984 25 QEEKIQQVFENLTQLEHP--NIVKFHRYWTDTHNDKPRARFLGEYEET 70 (72)
Q Consensus 25 ~~~~~~~Ei~~l~~l~Hp--nIv~l~~~~~~~~~~~~~~~lv~E~~~~ 70 (72)
......+|...+..|..- .+.+.+.+.+....+....++|||++++
T Consensus 54 ~~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~ 101 (206)
T PF06293_consen 54 RRSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPG 101 (206)
T ss_pred cchHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCC
Confidence 345678888877666422 3344444444322112356899999886
No 470
>cd05124 AFK Actin-Fragmin Kinase (AFK); catalytic domain. The AFK catalytic domain is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). AFK is found in slime molds, ciliates, and flowering plants. It catalyzes the transfer of the gamma-phosphoryl group from ATP specifically to threonine residues in the actin-fragmin complex. The phosphorylation sites are located at a minor contact site for DNase I and at an actin-actin contact site. Fragmin is an actin-binding protein that functions as a regulator of the microfilament system. It interferes with the growth of F-actin by severing actin filaments and capping their ends. The phosphorylation of the actin-fragmin complex inhibits its nucleation activity and results in calcium-dependent capping activity. Thus, AFK plays a role in regulating ac
Probab=62.13 E-value=4.9 Score=23.87 Aligned_cols=12 Identities=25% Similarity=0.133 Sum_probs=10.5
Q ss_pred EEEEEEecCCCC
Q psy8984 61 ARFLGEYEETPT 72 (72)
Q Consensus 61 ~~lv~E~~~~Gs 72 (72)
.+++|||.+|++
T Consensus 92 ~flimeYv~G~~ 103 (238)
T cd05124 92 YLLIMEYVPGIT 103 (238)
T ss_pred heeeeeecCCcc
Confidence 789999999974
No 471
>KOG2270|consensus
Probab=60.82 E-value=45 Score=21.96 Aligned_cols=13 Identities=23% Similarity=0.263 Sum_probs=10.2
Q ss_pred ccceEEEEEEEEe
Q psy8984 4 EEGVEVVWNEVQF 16 (72)
Q Consensus 4 ~~g~~vAiK~i~~ 16 (72)
..|..+|||+.+.
T Consensus 166 ~dG~~~AIKIYKT 178 (520)
T KOG2270|consen 166 EDGSEFAIKIYKT 178 (520)
T ss_pred CCCceEEEEEEee
Confidence 4678899998764
No 472
>KOG1165|consensus
Probab=60.29 E-value=7.7 Score=24.73 Aligned_cols=55 Identities=5% Similarity=0.001 Sum_probs=33.7
Q ss_pred ccceEEEEEEEEeccccCchHHHHHHHHHHHHHhcC-CCcceeeeeeeeeeCCCCCCeEEEEEEec
Q psy8984 4 EEGVEVVWNEVQFSERKNFKAQEEKIQQVFENLTQL-EHPNIVKFHRYWTDTHNDKPRARFLGEYE 68 (72)
Q Consensus 4 ~~g~~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~~~~~~~lv~E~~ 68 (72)
-++++||||.=...+ ..-++.-|...-+.| .-+.|...|.+-.+. ..-.||||++
T Consensus 51 ~nne~VAIKfEPrkS------~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG----~~NiLVidLL 106 (449)
T KOG1165|consen 51 YNNEPVAIKFEPRKS------EAPQLRDEYRTYKLLGGTEGIPQVYYFGQEG----KYNILVIDLL 106 (449)
T ss_pred ccCceEEEEeccccC------CcchHHHHHHHHHHHcCCCCCCceeeecccc----chhhhhhhhh
Confidence 357899999755431 223455566655555 577888877665443 2335788765
No 473
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=56.62 E-value=30 Score=20.45 Aligned_cols=13 Identities=23% Similarity=0.123 Sum_probs=10.6
Q ss_pred CeEEEEEEecCCC
Q psy8984 59 PRARFLGEYEETP 71 (72)
Q Consensus 59 ~~~~lv~E~~~~G 71 (72)
...|.++|+++|.
T Consensus 68 ~~~~~l~~~i~G~ 80 (313)
T TIGR02906 68 GDLYVLTEWIEGR 80 (313)
T ss_pred CEEEEEehhccCc
Confidence 3678999999874
No 474
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=56.37 E-value=23 Score=20.91 Aligned_cols=54 Identities=11% Similarity=0.059 Sum_probs=29.9
Q ss_pred EEEEEEEEeccccCchHHHHHHHHHHHHHhcCCCc--ceeeeeeee-----eeCCCCCCeEEEEEEecCCC
Q psy8984 8 EVVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHP--NIVKFHRYW-----TDTHNDKPRARFLGEYEETP 71 (72)
Q Consensus 8 ~vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~Hp--nIv~l~~~~-----~~~~~~~~~~~lv~E~~~~G 71 (72)
.+++|.... .....+..|+.++..|.+- .+.+.+... ... .+..++|+++++|.
T Consensus 39 ~~vLr~~~~-------~~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~---~~~~~~l~~~i~G~ 99 (296)
T cd05153 39 RYVLTLFEK-------VSAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSEL---AGKPAALVEFLAGE 99 (296)
T ss_pred cEEEEEcCC-------CChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeee---CCceEEEEEeCCCC
Confidence 566665532 1234566788877777432 244443321 111 13568999999885
No 475
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=55.78 E-value=43 Score=20.06 Aligned_cols=41 Identities=12% Similarity=0.057 Sum_probs=22.2
Q ss_pred HHHHHHHHHhcCCCc--ceeeeeeee-----eeCCCCCCeEEEEEEecCCC
Q psy8984 28 KIQQVFENLTQLEHP--NIVKFHRYW-----TDTHNDKPRARFLGEYEETP 71 (72)
Q Consensus 28 ~~~~Ei~~l~~l~Hp--nIv~l~~~~-----~~~~~~~~~~~lv~E~~~~G 71 (72)
.+..|.+++..|... .+.+.+... ... ....++++||++|.
T Consensus 61 ~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~~~---~g~~~~l~e~i~G~ 108 (307)
T TIGR00938 61 ELPFFLALTTHLAARGLPVPKPVKSRDGRQLSTL---AGKPACLVEFLQGL 108 (307)
T ss_pred HHHHHHHHHHHHHHCCCCCCccccCCCCCeehhc---CCeEEEEEEeCCCC
Confidence 455667777666321 233333321 111 13578999999885
No 476
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=51.09 E-value=14 Score=21.88 Aligned_cols=12 Identities=33% Similarity=0.210 Sum_probs=9.8
Q ss_pred eEEEEEEecCCC
Q psy8984 60 RARFLGEYEETP 71 (72)
Q Consensus 60 ~~~lv~E~~~~G 71 (72)
..+|+|||++|-
T Consensus 117 ~~~ll~EYIeG~ 128 (229)
T PF06176_consen 117 SYVLLMEYIEGV 128 (229)
T ss_pred EEEEEEEEecCe
Confidence 467899999984
No 477
>PLN00181 protein SPA1-RELATED; Provisional
Probab=48.51 E-value=2 Score=29.13 Aligned_cols=34 Identities=15% Similarity=0.060 Sum_probs=21.3
Q ss_pred HhcCCC-cceeeeeeeeeeCCC---CCCeEEEEEEecC
Q psy8984 36 LTQLEH-PNIVKFHRYWTDTHN---DKPRARFLGEYEE 69 (72)
Q Consensus 36 l~~l~H-pnIv~l~~~~~~~~~---~~~~~~lv~E~~~ 69 (72)
.+.++| +||.+++++|....+ ....++.++||+.
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 63 (793)
T PLN00181 26 SKSLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECED 63 (793)
T ss_pred cchhhHHHHHHHhhcccCCccccccccchhhhhhccCC
Confidence 456677 688888888732211 1135777888774
No 478
>PF14978 MRP-63: Mitochondrial ribosome protein 63
Probab=47.52 E-value=24 Score=17.79 Aligned_cols=23 Identities=17% Similarity=0.218 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHHHhcCCCcceee
Q psy8984 24 AQEEKIQQVFENLTQLEHPNIVK 46 (72)
Q Consensus 24 ~~~~~~~~Ei~~l~~l~HpnIv~ 46 (72)
...+.+.+|.+.+--|+||++-.
T Consensus 22 ~~~~~le~E~eN~~~Ls~PYLT~ 44 (91)
T PF14978_consen 22 NMIRRLEIEEENMYWLSRPYLTA 44 (91)
T ss_pred HHHHHHHHHHHHHHHHcCCcccH
Confidence 45677888889999999998653
No 479
>PF15632 ATPgrasp_Ter: ATP-grasp in the biosynthetic pathway with Ter operon
Probab=43.29 E-value=12 Score=23.27 Aligned_cols=12 Identities=25% Similarity=0.337 Sum_probs=9.6
Q ss_pred eEEEEEEecCCC
Q psy8984 60 RARFLGEYEETP 71 (72)
Q Consensus 60 ~~~lv~E~~~~G 71 (72)
.-+|||||++|-
T Consensus 198 ~~llvMeyL~G~ 209 (329)
T PF15632_consen 198 PPLLVMEYLPGP 209 (329)
T ss_pred CCcEEecCCCCC
Confidence 458999999874
No 480
>smart00605 CW CW domain.
Probab=40.76 E-value=29 Score=17.07 Aligned_cols=13 Identities=15% Similarity=0.335 Sum_probs=9.6
Q ss_pred cccceEEEEEEEE
Q psy8984 3 TEEGVEVVWNEVQ 15 (72)
Q Consensus 3 ~~~g~~vAiK~i~ 15 (72)
..+|..||+|...
T Consensus 64 ~~~~~~VAfK~~~ 76 (94)
T smart00605 64 SSSGKKVAFKVST 76 (94)
T ss_pred CCCCcEEEEEEeC
Confidence 3467889999753
No 481
>KOG4105|consensus
Probab=39.75 E-value=35 Score=18.14 Aligned_cols=23 Identities=26% Similarity=0.379 Sum_probs=18.3
Q ss_pred HHHHHHhcCCCcceeeeeeeeee
Q psy8984 31 QVFENLTQLEHPNIVKFHRYWTD 53 (72)
Q Consensus 31 ~Ei~~l~~l~HpnIv~l~~~~~~ 53 (72)
.|..+|+.|+|.|+=+=..+|.+
T Consensus 75 me~vim~~ldhknld~dv~yfa~ 97 (141)
T KOG4105|consen 75 MELVIMTRLDHKNLDKDVEYFAT 97 (141)
T ss_pred HHHHHhcccccccccccchhhcc
Confidence 35678999999999887777754
No 482
>PTZ00384 choline kinase; Provisional
Probab=38.23 E-value=47 Score=21.07 Aligned_cols=34 Identities=15% Similarity=0.020 Sum_probs=23.0
Q ss_pred HHHHHHHhcCCC-cceeeeeeeeeeCCCCCCeEEEEEEecCCC
Q psy8984 30 QQVFENLTQLEH-PNIVKFHRYWTDTHNDKPRARFLGEYEETP 71 (72)
Q Consensus 30 ~~Ei~~l~~l~H-pnIv~l~~~~~~~~~~~~~~~lv~E~~~~G 71 (72)
.+|+.+++.+.. .--.++++.+.. +++.||++|-
T Consensus 100 ~~E~~i~~~Ls~~glgP~l~~~f~~--------g~l~efIeGr 134 (383)
T PTZ00384 100 DLQYNIAKLLGDNNFGPKIIGRFGD--------FTIQEWVEGN 134 (383)
T ss_pred HHHHHHHHHHHhCCCCCeEEEecCC--------EEEEEEeccc
Confidence 568899988854 444556665421 5889999874
No 483
>cd01782 AF6_RA_repeat1 Ubiquitin domain of AT-6, first repeat. The AF-6 protein (also known as afadin and canoe) is a multidomain cell junction protein that contains two N-terminal Ras-associating (RA) domains in addition to FHA (forkhead-associated), DIL (class V myosin homology region), and PDZ domains and a proline-rich region. AF6 acts downstream of the Egfr (Epidermal Growth Factor-receptor)/Ras signalling pathway and provides a link from Egfr to cytoskeletal elements.
Probab=38.07 E-value=64 Score=17.00 Aligned_cols=15 Identities=20% Similarity=0.284 Sum_probs=12.3
Q ss_pred ccceEEEEEEEEecc
Q psy8984 4 EEGVEVVWNEVQFSE 18 (72)
Q Consensus 4 ~~g~~vAiK~i~~~~ 18 (72)
..|..||.|.++.++
T Consensus 30 d~~~k~atK~VrVsS 44 (112)
T cd01782 30 DGGEKVATKCIRVSS 44 (112)
T ss_pred cCCCcEEEEEEEEec
Confidence 457789999999864
No 484
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=37.11 E-value=1e+02 Score=18.93 Aligned_cols=34 Identities=12% Similarity=0.132 Sum_probs=19.4
Q ss_pred HHHHHHHHhcCC--CcceeeeeeeeeeCCCCCCeEEEEEEecCC
Q psy8984 29 IQQVFENLTQLE--HPNIVKFHRYWTDTHNDKPRARFLGEYEET 70 (72)
Q Consensus 29 ~~~Ei~~l~~l~--HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~ 70 (72)
...|+..|+++. +=.+.+-+.+. .-.|||||+..
T Consensus 115 ~~kEf~NL~R~~eAGVrvP~Pi~~~--------~nVLvMEfIg~ 150 (268)
T COG1718 115 ARKEFRNLKRAYEAGVRVPEPIAFR--------NNVLVMEFIGD 150 (268)
T ss_pred HHHHHHHHHHHHHcCCCCCCceeec--------CCeEEEEeccC
Confidence 346777776662 33444444442 23689999854
No 485
>smart00330 PIPKc Phosphatidylinositol phosphate kinases.
Probab=32.85 E-value=1.3e+02 Score=18.96 Aligned_cols=30 Identities=10% Similarity=-0.062 Sum_probs=18.2
Q ss_pred CCcceeeeeeeeeeCCCCC---CeEEEEEEecC
Q psy8984 40 EHPNIVKFHRYWTDTHNDK---PRARFLGEYEE 69 (72)
Q Consensus 40 ~HpnIv~l~~~~~~~~~~~---~~~~lv~E~~~ 69 (72)
.+--+.+++|++.-...+. ...++||+.+-
T Consensus 112 ~~SlL~ki~Gly~i~~~~~~~~~~~fiVM~NlF 144 (342)
T smart00330 112 PNTLLPKFFGLYRVKVKGGTEKKIYFLVMENLF 144 (342)
T ss_pred CCcchhhhcEEEEEEECCCcceeEEEEEEecCC
Confidence 3446778888875422112 34679999653
No 486
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=31.43 E-value=64 Score=20.61 Aligned_cols=58 Identities=12% Similarity=0.078 Sum_probs=33.1
Q ss_pred eEEEEEEEEeccc---cCchHHHHHHHHHHHHHhcCC--Cc-ceeeeeeeeeeCCCCCCeEEEEEEecCC
Q psy8984 7 VEVVWNEVQFSER---KNFKAQEEKIQQVFENLTQLE--HP-NIVKFHRYWTDTHNDKPRARFLGEYEET 70 (72)
Q Consensus 7 ~~vAiK~i~~~~~---~~~~~~~~~~~~Ei~~l~~l~--Hp-nIv~l~~~~~~~~~~~~~~~lv~E~~~~ 70 (72)
..|.||+-..--+ ...+....+...|...|+... -| .+.++|.+ +++ ...+|||+++.
T Consensus 21 ~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~~--D~e----~~~~vMEdL~~ 84 (370)
T TIGR01767 21 RAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFHF--DTE----MAVTVMEDLSH 84 (370)
T ss_pred eeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEEE--ccc----cceehHhhCcc
Confidence 5788887432111 012334556667887776652 23 56666655 332 45689999865
No 487
>PRK09902 hypothetical protein; Provisional
Probab=30.76 E-value=1.2e+02 Score=17.89 Aligned_cols=45 Identities=16% Similarity=0.086 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHhcCCCc--ceeeeeeeee-eCCCCCCeEEEEEEecCC
Q psy8984 25 QEEKIQQVFENLTQLEHP--NIVKFHRYWT-DTHNDKPRARFLGEYEET 70 (72)
Q Consensus 25 ~~~~~~~Ei~~l~~l~Hp--nIv~l~~~~~-~~~~~~~~~~lv~E~~~~ 70 (72)
....+.+|+..|..|..- .+.+.. ++. ...++.-..+||+|-++|
T Consensus 62 g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LVTe~L~g 109 (216)
T PRK09902 62 GRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLVTEDMAG 109 (216)
T ss_pred CchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEEEEeCCC
Confidence 567899999998887432 244444 222 112223357899997653
No 488
>PF06955 XET_C: Xyloglucan endo-transglycosylase (XET) C-terminus; InterPro: IPR010713 This entry represents the C terminus (approximately 60 residues) of plant xyloglucan endo-transglycosylase (XET). Xyloglucan is the predominant hemicellulose in the cell walls of most dicotyledons. With cellulose, it forms a network that strengthens the cell wall. XET catalyses the splitting of xyloglucan chains and the linking of the newly generated reducing end to the non-reducing end of another xyloglucan chain, thereby loosening the cell wall []. ; GO: 0016762 xyloglucan:xyloglucosyl transferase activity, 0006073 cellular glucan metabolic process, 0005618 cell wall, 0048046 apoplast; PDB: 1UMZ_A 1UN1_B 2VH9_B 2UWC_A 2UWB_B 2UWA_C.
Probab=30.75 E-value=24 Score=15.61 Aligned_cols=8 Identities=13% Similarity=0.252 Sum_probs=5.3
Q ss_pred EEEEEecC
Q psy8984 62 RFLGEYEE 69 (72)
Q Consensus 62 ~lv~E~~~ 69 (72)
|+|++||.
T Consensus 31 ymiYdYC~ 38 (51)
T PF06955_consen 31 YMIYDYCT 38 (51)
T ss_dssp CEEEEGGG
T ss_pred CeEecccC
Confidence 56777765
No 489
>PF09192 Act-Frag_cataly: Actin-fragmin kinase, catalytic; InterPro: IPR015275 This domain assumes a secondary structure consisting of eight beta strands and 11 alpha-helices, organised in two lobes. It is predominantly found in actin-fragmin kinase, it is the catalytic domain that mediates the phosphorylation of actin []. ; PDB: 1CJA_A.
Probab=30.71 E-value=30 Score=21.15 Aligned_cols=11 Identities=18% Similarity=0.096 Sum_probs=6.5
Q ss_pred eEEEEEEecCC
Q psy8984 60 RARFLGEYEET 70 (72)
Q Consensus 60 ~~~lv~E~~~~ 70 (72)
.+++||||.+|
T Consensus 122 a~~liMeyv~G 132 (275)
T PF09192_consen 122 AFFLIMEYVPG 132 (275)
T ss_dssp SEEEEEE---E
T ss_pred HHHHHHHhcCC
Confidence 47899999984
No 490
>PF10084 DUF2322: Uncharacterized protein conserved in bacteria (DUF2322); InterPro: IPR016755 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=30.24 E-value=19 Score=18.54 Aligned_cols=15 Identities=27% Similarity=0.417 Sum_probs=12.1
Q ss_pred CCcceeeeeeeeeeC
Q psy8984 40 EHPNIVKFHRYWTDT 54 (72)
Q Consensus 40 ~HpnIv~l~~~~~~~ 54 (72)
+||||=+|+.+....
T Consensus 78 kHPNID~Ll~v~~~~ 92 (100)
T PF10084_consen 78 KHPNIDRLLAVIEQG 92 (100)
T ss_pred CCCCHHHHHHHHcCC
Confidence 699999998886554
No 491
>PRK12396 5-methylribose kinase; Reviewed
Probab=29.80 E-value=25 Score=22.68 Aligned_cols=59 Identities=19% Similarity=0.185 Sum_probs=34.4
Q ss_pred ceEEEEEEEEeccc--cCchHHHHHHHHHHHHHhcCC--Cc-ceeeeeeeeeeCCCCCCeEEEEEEecCC
Q psy8984 6 GVEVVWNEVQFSER--KNFKAQEEKIQQVFENLTQLE--HP-NIVKFHRYWTDTHNDKPRARFLGEYEET 70 (72)
Q Consensus 6 g~~vAiK~i~~~~~--~~~~~~~~~~~~Ei~~l~~l~--Hp-nIv~l~~~~~~~~~~~~~~~lv~E~~~~ 70 (72)
+..|.||+-..--+ ...+....+...|.++|+... -| .+.++|.+ +++ ...+|||+++.
T Consensus 54 ~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~P~~VP~vy~~--D~e----~~~~vMEdL~~ 117 (409)
T PRK12396 54 NISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELAPGLVPKVYLF--DSV----MNCCVMEDLSD 117 (409)
T ss_pred CceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhCCCcCCeEEEE--CcH----HhhHHHHhCcc
Confidence 45688887432100 122345666777888777652 23 56667665 332 45689998864
No 492
>KOG4720|consensus
Probab=29.22 E-value=45 Score=21.17 Aligned_cols=35 Identities=11% Similarity=0.061 Sum_probs=25.2
Q ss_pred HHHHHHHhcC-CCcceeeeeeeeeeCCCCCCeEEEEEEecCCCC
Q psy8984 30 QQVFENLTQL-EHPNIVKFHRYWTDTHNDKPRARFLGEYEETPT 72 (72)
Q Consensus 30 ~~Ei~~l~~l-~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~~Gs 72 (72)
.+|+...+.| -|..-.+||+.|..+ |++||+.|-+
T Consensus 126 e~Ev~afk~L~a~G~ap~Ly~tF~NG--------Lvyefi~g~t 161 (391)
T KOG4720|consen 126 ENEVIAFKLLAAYGFAPKLYGTFNNG--------LVYEFIQGKT 161 (391)
T ss_pred HHHHHHHHHHHHcCcChhhhheecCc--------eEEeeecCcc
Confidence 3566666666 488888898888554 7889998753
No 493
>cd02846 PAZ_argonaute_like PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille. PAZ is found in two families of proteins that are essential components of RNA-mediated gene-silencing pathways, including RNA interference, the Piwi and Dicer families. PAZ functions as a nucleic acid binding domain, with a strong preference for single-stranded nucleic acids (RNA or DNA) or RNA duplexes with single-stranded 3' overhangs. It has been suggested that the PAZ domain provides a unique mode for the recognition of the two 3'-terminal nucleotides in single-stranded nucleic acids and buries the 3' OH group, and that it might recognize characteristic 3' overhangs in siRNAs within RISC (RNA-induced silencing) and other complexes.
Probab=28.41 E-value=52 Score=16.63 Aligned_cols=27 Identities=15% Similarity=0.026 Sum_probs=15.8
Q ss_pred cCCCcceeeeeeeeeeCCCCCCeEEEEEEecC
Q psy8984 38 QLEHPNIVKFHRYWTDTHNDKPRARFLGEYEE 69 (72)
Q Consensus 38 ~l~HpnIv~l~~~~~~~~~~~~~~~lv~E~~~ 69 (72)
.++||++.- ..+-... ...|+-||+|.
T Consensus 86 ~l~~p~lP~-v~~g~~~----~~~~~P~Elc~ 112 (114)
T cd02846 86 RLKYPNLPC-LQVGRKG----KPNYLPMELCN 112 (114)
T ss_pred cccCCCCCE-EEeCCCC----CCcEecceeEE
Confidence 367887443 3332221 35799999984
No 494
>PF04405 ScdA_N: Domain of Unknown function (DUF542) ; InterPro: IPR007500 This is a domain of unknown function found at the N terminus of genes involved in cell wall development and nitrous oxide protection. ScdA is required for normal cell growth and development; mutants have an increased level of peptidoglycan cross-linking and aberrant cellular morphology suggesting a role for ScdA in cell wall metabolism []. NorA1, NorA2, and YtfE are involved in the nitrous oxide response. NorA1 and NorA2, which are similar to YtfE, are co-transcribed with the membrane-bound nitrous oxide (NO) reductases. The genes appear to be involved in NO protection but their function is unknown [, ].
Probab=27.96 E-value=25 Score=15.99 Aligned_cols=6 Identities=0% Similarity=-0.047 Sum_probs=3.6
Q ss_pred EecCCC
Q psy8984 66 EYEETP 71 (72)
Q Consensus 66 E~~~~G 71 (72)
+||.||
T Consensus 25 DfCCgG 30 (56)
T PF04405_consen 25 DFCCGG 30 (56)
T ss_pred cccCCC
Confidence 566666
No 495
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=27.93 E-value=1.6e+02 Score=18.50 Aligned_cols=46 Identities=7% Similarity=0.054 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHHHhcCCC--cceeeeeeeeeeCCCCCCeEEEEEEecCCC
Q psy8984 24 AQEEKIQQVFENLTQLEH--PNIVKFHRYWTDTHNDKPRARFLGEYEETP 71 (72)
Q Consensus 24 ~~~~~~~~Ei~~l~~l~H--pnIv~l~~~~~~~~~~~~~~~lv~E~~~~G 71 (72)
.......+|..+|+.+.- .-+...++++.++. ....|.||+++.|.
T Consensus 63 ~~~~~~~re~~~i~~l~~~~vP~p~~~~~~~~~~--~g~pf~v~~~veGe 110 (321)
T COG3173 63 ESAHDEKREYRVIAALLDVDVPVPRAFGLCGEGY--LGTPFYVMEWVEGE 110 (321)
T ss_pred hhhhHHHhHHHHHHHhcCCCCCCcccccccccCC--CCCceEEEEEecce
Confidence 345677889998887643 23344455554432 13568999999873
No 496
>KOG0777|consensus
Probab=27.75 E-value=27 Score=21.09 Aligned_cols=20 Identities=35% Similarity=0.635 Sum_probs=15.3
Q ss_pred HHHHHHHHhcCCCcceeeee
Q psy8984 29 IQQVFENLTQLEHPNIVKFH 48 (72)
Q Consensus 29 ~~~Ei~~l~~l~HpnIv~l~ 48 (72)
..+-++..++|.|||.++++
T Consensus 107 yFlalekV~qLdhP~a~kif 126 (322)
T KOG0777|consen 107 YFLALEKVSQLDHPNAIKIF 126 (322)
T ss_pred HHHHHHHHHhcCCchHHHHH
Confidence 34567778889999998765
No 497
>PF08265 YL1_C: YL1 nuclear protein C-terminal domain; InterPro: IPR013272 This domain is found at the C terminus in proteins of the YL1 family []. These proteins have been shown to be DNA-binding and may be transcription factors []. This domain is also found in proteins that do not belong to the YL1 family.
Probab=27.23 E-value=27 Score=13.84 Aligned_cols=9 Identities=22% Similarity=0.475 Sum_probs=5.1
Q ss_pred CcccceEEE
Q psy8984 2 DTEEGVEVV 10 (72)
Q Consensus 2 ~~~~g~~vA 10 (72)
|+.||.++|
T Consensus 14 DP~T~l~Y~ 22 (30)
T PF08265_consen 14 DPKTGLPYA 22 (30)
T ss_pred CCCCCCccc
Confidence 556665554
No 498
>PF06136 DUF966: Domain of unknown function (DUF966); InterPro: IPR010369 This is a family of plant proteins confined to monocotyledons and mosses, with unknown function
Probab=27.17 E-value=36 Score=21.31 Aligned_cols=13 Identities=38% Similarity=0.669 Sum_probs=9.8
Q ss_pred hcCCCcceeeeee
Q psy8984 37 TQLEHPNIVKFHR 49 (72)
Q Consensus 37 ~~l~HpnIv~l~~ 49 (72)
.+|.|||.+.+.-
T Consensus 11 GqLEHPHfieV~~ 23 (337)
T PF06136_consen 11 GQLEHPHFIEVPL 23 (337)
T ss_pred CCCCCCeeEEecc
Confidence 3688999887754
No 499
>KOG0424|consensus
Probab=26.97 E-value=1e+02 Score=17.18 Aligned_cols=36 Identities=19% Similarity=0.194 Sum_probs=19.9
Q ss_pred EEEEEEEeccccCchHHHHHHHHHHHHHhcCCCcceee
Q psy8984 9 VVWNEVQFSERKNFKAQEEKIQQVFENLTQLEHPNIVK 46 (72)
Q Consensus 9 vAiK~i~~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~ 46 (72)
|.++.+.-+......-...+++.+|+-| |.+||+-.
T Consensus 92 VcLsiL~e~~~W~paitikqiL~gIqdL--L~~Pn~~~ 127 (158)
T KOG0424|consen 92 VCLSILNEEKDWRPAITIKQILLGIQDL--LDTPNITS 127 (158)
T ss_pred EehhhhccccCCCchhhHHHHHHHHHHH--hcCCCCCC
Confidence 5556555332112233456777666654 68898754
No 500
>PF01504 PIP5K: Phosphatidylinositol-4-phosphate 5-Kinase; InterPro: IPR002498 This entry represents a conserved region from the common kinase core found in the type I phosphatidylinositol-4-phosphate 5-kinase (PIP5K) family as described in []. This region is found in I, II and III phosphatidylinositol-4-phosphate 5-kinases (PIP5K enzymes). PIP5K catalyses the formation of phosphoinositol-4,5-bisphosphate via the phosphorylation of phosphatidylinositol-4-phosphate a precursor in the phosphinositide signalling pathway.; GO: 0016307 phosphatidylinositol phosphate kinase activity, 0046488 phosphatidylinositol metabolic process; PDB: 1BO1_A 2GK9_C 2YBX_B.
Probab=26.44 E-value=1.5e+02 Score=17.64 Aligned_cols=56 Identities=9% Similarity=0.078 Sum_probs=27.0
Q ss_pred EEEEEEEEeccccCchHHHHHHHHHH----HHHhcCCCcceeeeeeeeeeC-CCC-CCeEEEEEEecCC
Q psy8984 8 EVVWNEVQFSERKNFKAQEEKIQQVF----ENLTQLEHPNIVKFHRYWTDT-HND-KPRARFLGEYEET 70 (72)
Q Consensus 8 ~vAiK~i~~~~~~~~~~~~~~~~~Ei----~~l~~l~HpnIv~l~~~~~~~-~~~-~~~~~lv~E~~~~ 70 (72)
.+.||.+... +...+.+-+ +-+..-...-+++++|+|.-. ..+ ....++|||.+-.
T Consensus 29 kfiiKti~~~-------E~~~l~~~lp~Y~~~~~~~~~SlL~r~~Gl~~i~~~~~~~~~~fvVM~N~f~ 90 (252)
T PF01504_consen 29 KFIIKTISKS-------EFKFLLKILPAYFEHMSENPNSLLPRFYGLYSIKKSNGKEKIYFVVMENLFY 90 (252)
T ss_dssp SEEEEEE-HH-------HHHHHHHHHHHHHHHHHHTTTSSS--EEEEEEE-EETT-EEEEEEEEE-SS-
T ss_pred CEEEEeCCHH-------HHHHHHHHHHHHHHHHHhCcCchHHHHHHHheecccCCceeEEEEEECCCcc
Confidence 4788988643 222222211 333333345688888887652 111 2346889997643
Done!