RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy9003
(1276 letters)
>3aml_A OS06G0726400 protein; starch-branching, transferase; HET: EPE; 1.70A
{Oryza sativa japonica group} PDB: 3amk_A
Length = 755
Score = 320 bits (823), Expect = 9e-95
Identities = 114/176 (64%), Positives = 135/176 (76%), Gaps = 3/176 (1%)
Query: 1033 FGTPEQLKYLVDECHKAGLYVLLDVVHSHASKNVLDGLNEFD---GTQACFFHDGPRGTH 1089
GTPE LKYLVD+ H GL VL+DVVHSHAS NV DGLN +D T +FH G RG H
Sbjct: 247 SGTPEDLKYLVDKAHSLGLRVLMDVVHSHASNNVTDGLNGYDVGQNTHESYFHTGDRGYH 306
Query: 1090 PLWDSRLFNYSEIEVLRFLLSNLRWYLDEYQFDGFRFDGVTSMLYHNHGCGEGFSGHYDE 1149
LWDSRLFNY+ EVLRFLLSNLR+++DE+ FDGFRFDGVTSMLYH+HG +GF+G+Y E
Sbjct: 307 KLWDSRLFNYANWEVLRFLLSNLRYWMDEFMFDGFRFDGVTSMLYHHHGINKGFTGNYKE 366
Query: 1150 YFGLNVDTDALIYLMVANKFLHDKYPEIITIAEDVSGMPASCRPVTEGGTGFDYRL 1205
YF L+ D DA++Y+M+AN +H PE +AEDVSGMP CRPV EGG GFD+RL
Sbjct: 367 YFSLDTDVDAIVYMMLANHLMHKLLPEATIVAEDVSGMPVLCRPVDEGGVGFDFRL 422
Score = 144 bits (366), Expect = 2e-35
Identities = 46/143 (32%), Positives = 73/143 (51%), Gaps = 8/143 (5%)
Query: 798 GDFNNWNREEFAYKKLDFGKWELVLPPNPDGSCKLTHLSQVKLVVRNQHGHLLDRLSPWA 857
G+FNNWN + +K FG W + + +G + H S+VK R+ G +DR+ W
Sbjct: 83 GEFNNWNGAKHKMEKDKFGIWSIKISH-VNGKPAIPHNSKVKFRFRHGGGAWVDRIPAWI 141
Query: 858 TYVTEPP-VVGHAYEQRIWNPKPQDKHKWTSSKPKKPDNLKIYESHVGICTQEQKCASYE 916
Y T G Y+ W+P +++ + +P KPD +IYE+HVG+ +E + ++Y
Sbjct: 142 RYATFDASKFGAPYDGVHWDPPACERYVFKHPRPPKPDAPRIYEAHVGMSGEEPEVSTYR 201
Query: 917 DFVRVVIPRIVKQG------MAI 933
+F V+PRI MAI
Sbjct: 202 EFADNVLPRIRANNYNTVQLMAI 224
Score = 136 bits (344), Expect = 8e-33
Identities = 53/83 (63%), Positives = 62/83 (74%)
Query: 928 KQGMAIPDKWIELLKKFKDEDWNMGNIVHTLTNRRYMEKTVAYAESHDQALVGDKTIAFW 987
+ MAIPD+WI+ LK +D W+M IV TLTNRRY EK +AYAESHDQ++VGDKTIAF
Sbjct: 421 RLAMAIPDRWIDYLKNKEDRKWSMSEIVQTLTNRRYTEKCIAYAESHDQSIVGDKTIAFL 480
Query: 988 LMDKEMYTHMSTLSDPSLIIDRA 1010
LMDKEMYT MS L S I+R
Sbjct: 481 LMDKEMYTGMSDLQPASPTINRG 503
Score = 86.7 bits (215), Expect = 2e-17
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 15 PELHKLLERDPYLNPYQYEMKRRYGLMVNFLEQFEKHEGGIEKFTTSYNKYGIHVQADNS 74
+ + + DP L ++ R ++ EKHEGG+E+F+ Y K+GI+ D +
Sbjct: 8 VDHLPIYDLDPKLEEFKDHFNYRIKRYLDQKCLIEKHEGGLEEFSKGYLKFGINTV-DGA 66
Query: 75 VRCFEWAPSAQQLYLTGN 92
EWAP+AQ+ L G
Sbjct: 67 TIYREWAPAAQEAQLIGE 84
Score = 77.4 bits (191), Expect = 2e-14
Identities = 26/55 (47%), Positives = 36/55 (65%)
Query: 1217 FDAAMNTTEERFKWLSADPGYVSTKHEGDKVIIFERAGLLFAFNFNGTQSFTDYR 1271
FD AMN EE F +LS+ VS +E DKVI+FER L+F FNF+ +++ Y+
Sbjct: 570 FDQAMNALEEEFSFLSSSKQIVSDMNEKDKVIVFERGDLVFVFNFHPNKTYKGYK 624
Score = 45.5 bits (108), Expect = 1e-04
Identities = 16/26 (61%), Positives = 17/26 (65%)
Query: 769 FGTPEQLKYLVDECHKAGLLCFMHVV 794
GTPE LKYLVD+ H GL M VV
Sbjct: 247 SGTPEDLKYLVDKAHSLGLRVLMDVV 272
Score = 42.8 bits (101), Expect = 8e-04
Identities = 13/20 (65%), Positives = 14/20 (70%)
Query: 123 FGTPEQLKYLVDECHKAGLF 142
GTPE LKYLVD+ H GL
Sbjct: 247 SGTPEDLKYLVDKAHSLGLR 266
Score = 42.8 bits (101), Expect = 8e-04
Identities = 13/20 (65%), Positives = 14/20 (70%)
Query: 142 FGTPEQLKYLVDECHKAGLF 161
GTPE LKYLVD+ H GL
Sbjct: 247 SGTPEDLKYLVDKAHSLGLR 266
Score = 42.8 bits (101), Expect = 8e-04
Identities = 13/20 (65%), Positives = 14/20 (70%)
Query: 161 FGTPEQLKYLVDECHKAGLF 180
GTPE LKYLVD+ H GL
Sbjct: 247 SGTPEDLKYLVDKAHSLGLR 266
Score = 42.8 bits (101), Expect = 8e-04
Identities = 13/20 (65%), Positives = 14/20 (70%)
Query: 180 FGTPEQLKYLVDECHKAGLF 199
GTPE LKYLVD+ H GL
Sbjct: 247 SGTPEDLKYLVDKAHSLGLR 266
Score = 42.8 bits (101), Expect = 8e-04
Identities = 13/20 (65%), Positives = 14/20 (70%)
Query: 199 FGTPEQLKYLVDECHKAGLF 218
GTPE LKYLVD+ H GL
Sbjct: 247 SGTPEDLKYLVDKAHSLGLR 266
Score = 42.8 bits (101), Expect = 8e-04
Identities = 13/20 (65%), Positives = 14/20 (70%)
Query: 218 FGTPEQLKYLVDECHKAGLF 237
GTPE LKYLVD+ H GL
Sbjct: 247 SGTPEDLKYLVDKAHSLGLR 266
Score = 42.8 bits (101), Expect = 8e-04
Identities = 13/20 (65%), Positives = 14/20 (70%)
Query: 237 FGTPEQLKYLVDECHKAGLF 256
GTPE LKYLVD+ H GL
Sbjct: 247 SGTPEDLKYLVDKAHSLGLR 266
Score = 42.8 bits (101), Expect = 8e-04
Identities = 13/20 (65%), Positives = 14/20 (70%)
Query: 256 FGTPEQLKYLVDECHKAGLF 275
GTPE LKYLVD+ H GL
Sbjct: 247 SGTPEDLKYLVDKAHSLGLR 266
Score = 42.8 bits (101), Expect = 8e-04
Identities = 13/20 (65%), Positives = 14/20 (70%)
Query: 275 FGTPEQLKYLVDECHKAGLF 294
GTPE LKYLVD+ H GL
Sbjct: 247 SGTPEDLKYLVDKAHSLGLR 266
Score = 42.8 bits (101), Expect = 8e-04
Identities = 13/20 (65%), Positives = 14/20 (70%)
Query: 294 FGTPEQLKYLVDECHKAGLF 313
GTPE LKYLVD+ H GL
Sbjct: 247 SGTPEDLKYLVDKAHSLGLR 266
Score = 42.8 bits (101), Expect = 8e-04
Identities = 13/20 (65%), Positives = 14/20 (70%)
Query: 313 FGTPEQLKYLVDECHKAGLF 332
GTPE LKYLVD+ H GL
Sbjct: 247 SGTPEDLKYLVDKAHSLGLR 266
Score = 42.8 bits (101), Expect = 8e-04
Identities = 13/20 (65%), Positives = 14/20 (70%)
Query: 332 FGTPEQLKYLVDECHKAGLF 351
GTPE LKYLVD+ H GL
Sbjct: 247 SGTPEDLKYLVDKAHSLGLR 266
Score = 42.8 bits (101), Expect = 8e-04
Identities = 13/20 (65%), Positives = 14/20 (70%)
Query: 351 FGTPEQLKYLVDECHKAGLF 370
GTPE LKYLVD+ H GL
Sbjct: 247 SGTPEDLKYLVDKAHSLGLR 266
Score = 42.8 bits (101), Expect = 8e-04
Identities = 13/20 (65%), Positives = 14/20 (70%)
Query: 370 FGTPEQLKYLVDECHKAGLF 389
GTPE LKYLVD+ H GL
Sbjct: 247 SGTPEDLKYLVDKAHSLGLR 266
Score = 42.8 bits (101), Expect = 8e-04
Identities = 13/20 (65%), Positives = 14/20 (70%)
Query: 389 FGTPEQLKYLVDECHKAGLF 408
GTPE LKYLVD+ H GL
Sbjct: 247 SGTPEDLKYLVDKAHSLGLR 266
Score = 42.8 bits (101), Expect = 8e-04
Identities = 13/20 (65%), Positives = 14/20 (70%)
Query: 408 FGTPEQLKYLVDECHKAGLF 427
GTPE LKYLVD+ H GL
Sbjct: 247 SGTPEDLKYLVDKAHSLGLR 266
Score = 42.8 bits (101), Expect = 8e-04
Identities = 13/20 (65%), Positives = 14/20 (70%)
Query: 427 FGTPEQLKYLVDECHKAGLF 446
GTPE LKYLVD+ H GL
Sbjct: 247 SGTPEDLKYLVDKAHSLGLR 266
Score = 42.8 bits (101), Expect = 8e-04
Identities = 13/20 (65%), Positives = 14/20 (70%)
Query: 446 FGTPEQLKYLVDECHKAGLF 465
GTPE LKYLVD+ H GL
Sbjct: 247 SGTPEDLKYLVDKAHSLGLR 266
Score = 42.8 bits (101), Expect = 8e-04
Identities = 13/20 (65%), Positives = 14/20 (70%)
Query: 465 FGTPEQLKYLVDECHKAGLF 484
GTPE LKYLVD+ H GL
Sbjct: 247 SGTPEDLKYLVDKAHSLGLR 266
Score = 42.8 bits (101), Expect = 8e-04
Identities = 13/20 (65%), Positives = 14/20 (70%)
Query: 484 FGTPEQLKYLVDECHKAGLF 503
GTPE LKYLVD+ H GL
Sbjct: 247 SGTPEDLKYLVDKAHSLGLR 266
Score = 42.8 bits (101), Expect = 8e-04
Identities = 13/20 (65%), Positives = 14/20 (70%)
Query: 503 FGTPEQLKYLVDECHKAGLF 522
GTPE LKYLVD+ H GL
Sbjct: 247 SGTPEDLKYLVDKAHSLGLR 266
Score = 42.8 bits (101), Expect = 8e-04
Identities = 13/20 (65%), Positives = 14/20 (70%)
Query: 522 FGTPEQLKYLVDECHKAGLF 541
GTPE LKYLVD+ H GL
Sbjct: 247 SGTPEDLKYLVDKAHSLGLR 266
Score = 42.8 bits (101), Expect = 8e-04
Identities = 13/20 (65%), Positives = 14/20 (70%)
Query: 541 FGTPEQLKYLVDECHKAGLF 560
GTPE LKYLVD+ H GL
Sbjct: 247 SGTPEDLKYLVDKAHSLGLR 266
Score = 42.8 bits (101), Expect = 8e-04
Identities = 13/20 (65%), Positives = 14/20 (70%)
Query: 560 FGTPEQLKYLVDECHKAGLF 579
GTPE LKYLVD+ H GL
Sbjct: 247 SGTPEDLKYLVDKAHSLGLR 266
Score = 42.8 bits (101), Expect = 8e-04
Identities = 13/20 (65%), Positives = 14/20 (70%)
Query: 579 FGTPEQLKYLVDECHKAGLF 598
GTPE LKYLVD+ H GL
Sbjct: 247 SGTPEDLKYLVDKAHSLGLR 266
Score = 42.8 bits (101), Expect = 8e-04
Identities = 13/20 (65%), Positives = 14/20 (70%)
Query: 598 FGTPEQLKYLVDECHKAGLF 617
GTPE LKYLVD+ H GL
Sbjct: 247 SGTPEDLKYLVDKAHSLGLR 266
Score = 42.8 bits (101), Expect = 8e-04
Identities = 13/20 (65%), Positives = 14/20 (70%)
Query: 617 FGTPEQLKYLVDECHKAGLF 636
GTPE LKYLVD+ H GL
Sbjct: 247 SGTPEDLKYLVDKAHSLGLR 266
Score = 42.8 bits (101), Expect = 8e-04
Identities = 13/20 (65%), Positives = 14/20 (70%)
Query: 636 FGTPEQLKYLVDECHKAGLF 655
GTPE LKYLVD+ H GL
Sbjct: 247 SGTPEDLKYLVDKAHSLGLR 266
Score = 42.8 bits (101), Expect = 8e-04
Identities = 13/20 (65%), Positives = 14/20 (70%)
Query: 655 FGTPEQLKYLVDECHKAGLF 674
GTPE LKYLVD+ H GL
Sbjct: 247 SGTPEDLKYLVDKAHSLGLR 266
Score = 42.8 bits (101), Expect = 8e-04
Identities = 13/20 (65%), Positives = 14/20 (70%)
Query: 674 FGTPEQLKYLVDECHKAGLF 693
GTPE LKYLVD+ H GL
Sbjct: 247 SGTPEDLKYLVDKAHSLGLR 266
Score = 42.8 bits (101), Expect = 8e-04
Identities = 13/20 (65%), Positives = 14/20 (70%)
Query: 693 FGTPEQLKYLVDECHKAGLF 712
GTPE LKYLVD+ H GL
Sbjct: 247 SGTPEDLKYLVDKAHSLGLR 266
Score = 42.8 bits (101), Expect = 8e-04
Identities = 13/20 (65%), Positives = 14/20 (70%)
Query: 712 FGTPEQLKYLVDECHKAGLF 731
GTPE LKYLVD+ H GL
Sbjct: 247 SGTPEDLKYLVDKAHSLGLR 266
Score = 42.8 bits (101), Expect = 8e-04
Identities = 13/20 (65%), Positives = 14/20 (70%)
Query: 731 FGTPEQLKYLVDECHKAGLF 750
GTPE LKYLVD+ H GL
Sbjct: 247 SGTPEDLKYLVDKAHSLGLR 266
Score = 42.8 bits (101), Expect = 8e-04
Identities = 13/20 (65%), Positives = 14/20 (70%)
Query: 750 FGTPEQLKYLVDECHKAGLF 769
GTPE LKYLVD+ H GL
Sbjct: 247 SGTPEDLKYLVDKAHSLGLR 266
>1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich,
transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2
b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A*
Length = 617
Score = 154 bits (391), Expect = 5e-39
Identities = 60/176 (34%), Positives = 91/176 (51%), Gaps = 13/176 (7%)
Query: 1033 FGTPEQLKYLVDECHKAGLYVLLDVVHSHASKNVLDGLNEFDGTQACFFHDGPR-GTHPL 1091
FGT + +Y +D H AGL V+LD V H + L EFDGT + H PR G H
Sbjct: 201 FGTRDDFRYFIDAAHAAGLNVILDWVPGHFPTDD-FALAEFDGT-NLYEHSDPREGYHQD 258
Query: 1092 WDSRLFNYSEIEVLRFLLSNLRWYLDEYQFDGFRFDGVTSMLYHNHGCGEGFSGHYDEY- 1150
W++ ++NY EV FL+ N ++++ + D R D V SM+Y ++ EG E+
Sbjct: 259 WNTLIYNYGRREVSNFLVGNALYWIERFGIDALRVDAVASMIYRDYSRKEG------EWI 312
Query: 1151 ---FGLNVDTDALIYLMVANKFLHDKYPEIITIAEDVSGMPASCRPVTEGGTGFDY 1203
FG + +A+ +L N+ L ++ +T+AE+ + P RP GG GF Y
Sbjct: 313 PNEFGGRENLEAIEFLRNTNRILGEQVSGAVTMAEESTDFPGVSRPQDMGGLGFWY 368
Score = 50.6 bits (122), Expect = 3e-06
Identities = 26/116 (22%), Positives = 42/116 (36%), Gaps = 19/116 (16%)
Query: 794 VCAAGDFNNWNREEFAYKKL-DFGKWELVLPPNPDGSCKLTHLSQVKLVVRNQHGHLLDR 852
V G FN W+ + + G WEL +P +G K + + +G+L +
Sbjct: 39 VSVVGQFNYWDGRRHPMRLRKESGIWELFIPGAHNGQL-------YKYEMIDANGNLRLK 91
Query: 853 LSPWATYVTEPPVVGHAYEQRIWNPKPQDKHKWTSSKPKKPDNLK----IYESHVG 904
P+A P A I + + + KK + IYE H+G
Sbjct: 92 SDPYAFEAQMRP--ETA--SLICGL---PEKVVQTEERKKANQFDAPISIYEVHLG 140
Score = 40.2 bits (95), Expect = 0.004
Identities = 11/25 (44%), Positives = 14/25 (56%)
Query: 117 YILTGVFGTPEQLKYLVDECHKAGL 141
Y T FGT + +Y +D H AGL
Sbjct: 195 YAPTRRFGTRDDFRYFIDAAHAAGL 219
Score = 40.2 bits (95), Expect = 0.005
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 142 FGTPEQLKYLVDECHKAGL 160
FGT + +Y +D H AGL
Sbjct: 201 FGTRDDFRYFIDAAHAAGL 219
Score = 40.2 bits (95), Expect = 0.005
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 161 FGTPEQLKYLVDECHKAGL 179
FGT + +Y +D H AGL
Sbjct: 201 FGTRDDFRYFIDAAHAAGL 219
Score = 40.2 bits (95), Expect = 0.005
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 180 FGTPEQLKYLVDECHKAGL 198
FGT + +Y +D H AGL
Sbjct: 201 FGTRDDFRYFIDAAHAAGL 219
Score = 40.2 bits (95), Expect = 0.005
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 199 FGTPEQLKYLVDECHKAGL 217
FGT + +Y +D H AGL
Sbjct: 201 FGTRDDFRYFIDAAHAAGL 219
Score = 40.2 bits (95), Expect = 0.005
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 218 FGTPEQLKYLVDECHKAGL 236
FGT + +Y +D H AGL
Sbjct: 201 FGTRDDFRYFIDAAHAAGL 219
Score = 40.2 bits (95), Expect = 0.005
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 237 FGTPEQLKYLVDECHKAGL 255
FGT + +Y +D H AGL
Sbjct: 201 FGTRDDFRYFIDAAHAAGL 219
Score = 40.2 bits (95), Expect = 0.005
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 256 FGTPEQLKYLVDECHKAGL 274
FGT + +Y +D H AGL
Sbjct: 201 FGTRDDFRYFIDAAHAAGL 219
Score = 40.2 bits (95), Expect = 0.005
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 275 FGTPEQLKYLVDECHKAGL 293
FGT + +Y +D H AGL
Sbjct: 201 FGTRDDFRYFIDAAHAAGL 219
Score = 40.2 bits (95), Expect = 0.005
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 294 FGTPEQLKYLVDECHKAGL 312
FGT + +Y +D H AGL
Sbjct: 201 FGTRDDFRYFIDAAHAAGL 219
Score = 40.2 bits (95), Expect = 0.005
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 313 FGTPEQLKYLVDECHKAGL 331
FGT + +Y +D H AGL
Sbjct: 201 FGTRDDFRYFIDAAHAAGL 219
Score = 40.2 bits (95), Expect = 0.005
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 332 FGTPEQLKYLVDECHKAGL 350
FGT + +Y +D H AGL
Sbjct: 201 FGTRDDFRYFIDAAHAAGL 219
Score = 40.2 bits (95), Expect = 0.005
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 351 FGTPEQLKYLVDECHKAGL 369
FGT + +Y +D H AGL
Sbjct: 201 FGTRDDFRYFIDAAHAAGL 219
Score = 40.2 bits (95), Expect = 0.005
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 370 FGTPEQLKYLVDECHKAGL 388
FGT + +Y +D H AGL
Sbjct: 201 FGTRDDFRYFIDAAHAAGL 219
Score = 40.2 bits (95), Expect = 0.005
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 389 FGTPEQLKYLVDECHKAGL 407
FGT + +Y +D H AGL
Sbjct: 201 FGTRDDFRYFIDAAHAAGL 219
Score = 40.2 bits (95), Expect = 0.005
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 408 FGTPEQLKYLVDECHKAGL 426
FGT + +Y +D H AGL
Sbjct: 201 FGTRDDFRYFIDAAHAAGL 219
Score = 40.2 bits (95), Expect = 0.005
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 427 FGTPEQLKYLVDECHKAGL 445
FGT + +Y +D H AGL
Sbjct: 201 FGTRDDFRYFIDAAHAAGL 219
Score = 40.2 bits (95), Expect = 0.005
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 446 FGTPEQLKYLVDECHKAGL 464
FGT + +Y +D H AGL
Sbjct: 201 FGTRDDFRYFIDAAHAAGL 219
Score = 40.2 bits (95), Expect = 0.005
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 465 FGTPEQLKYLVDECHKAGL 483
FGT + +Y +D H AGL
Sbjct: 201 FGTRDDFRYFIDAAHAAGL 219
Score = 40.2 bits (95), Expect = 0.005
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 484 FGTPEQLKYLVDECHKAGL 502
FGT + +Y +D H AGL
Sbjct: 201 FGTRDDFRYFIDAAHAAGL 219
Score = 40.2 bits (95), Expect = 0.005
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 503 FGTPEQLKYLVDECHKAGL 521
FGT + +Y +D H AGL
Sbjct: 201 FGTRDDFRYFIDAAHAAGL 219
Score = 40.2 bits (95), Expect = 0.005
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 522 FGTPEQLKYLVDECHKAGL 540
FGT + +Y +D H AGL
Sbjct: 201 FGTRDDFRYFIDAAHAAGL 219
Score = 40.2 bits (95), Expect = 0.005
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 541 FGTPEQLKYLVDECHKAGL 559
FGT + +Y +D H AGL
Sbjct: 201 FGTRDDFRYFIDAAHAAGL 219
Score = 40.2 bits (95), Expect = 0.005
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 560 FGTPEQLKYLVDECHKAGL 578
FGT + +Y +D H AGL
Sbjct: 201 FGTRDDFRYFIDAAHAAGL 219
Score = 40.2 bits (95), Expect = 0.005
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 579 FGTPEQLKYLVDECHKAGL 597
FGT + +Y +D H AGL
Sbjct: 201 FGTRDDFRYFIDAAHAAGL 219
Score = 40.2 bits (95), Expect = 0.005
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 598 FGTPEQLKYLVDECHKAGL 616
FGT + +Y +D H AGL
Sbjct: 201 FGTRDDFRYFIDAAHAAGL 219
Score = 40.2 bits (95), Expect = 0.005
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 617 FGTPEQLKYLVDECHKAGL 635
FGT + +Y +D H AGL
Sbjct: 201 FGTRDDFRYFIDAAHAAGL 219
Score = 40.2 bits (95), Expect = 0.005
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 636 FGTPEQLKYLVDECHKAGL 654
FGT + +Y +D H AGL
Sbjct: 201 FGTRDDFRYFIDAAHAAGL 219
Score = 40.2 bits (95), Expect = 0.005
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 655 FGTPEQLKYLVDECHKAGL 673
FGT + +Y +D H AGL
Sbjct: 201 FGTRDDFRYFIDAAHAAGL 219
Score = 40.2 bits (95), Expect = 0.005
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 674 FGTPEQLKYLVDECHKAGL 692
FGT + +Y +D H AGL
Sbjct: 201 FGTRDDFRYFIDAAHAAGL 219
Score = 40.2 bits (95), Expect = 0.005
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 693 FGTPEQLKYLVDECHKAGL 711
FGT + +Y +D H AGL
Sbjct: 201 FGTRDDFRYFIDAAHAAGL 219
Score = 40.2 bits (95), Expect = 0.005
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 712 FGTPEQLKYLVDECHKAGL 730
FGT + +Y +D H AGL
Sbjct: 201 FGTRDDFRYFIDAAHAAGL 219
Score = 40.2 bits (95), Expect = 0.005
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 731 FGTPEQLKYLVDECHKAGL 749
FGT + +Y +D H AGL
Sbjct: 201 FGTRDDFRYFIDAAHAAGL 219
Score = 40.2 bits (95), Expect = 0.005
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 750 FGTPEQLKYLVDECHKAGL 768
FGT + +Y +D H AGL
Sbjct: 201 FGTRDDFRYFIDAAHAAGL 219
Score = 40.2 bits (95), Expect = 0.005
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 769 FGTPEQLKYLVDECHKAGL 787
FGT + +Y +D H AGL
Sbjct: 201 FGTRDDFRYFIDAAHAAGL 219
>3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV,
mesophilic human pathogen, RV1326C gene, glycosyl
transferase; 2.33A {Mycobacterium tuberculosis}
Length = 722
Score = 153 bits (390), Expect = 2e-38
Identities = 60/176 (34%), Positives = 89/176 (50%), Gaps = 13/176 (7%)
Query: 1033 FGTPEQLKYLVDECHKAGLYVLLDVVHSHASKNVLDGLNEFDGTQACFFHDGPR-GTHPL 1091
FGTP+ + LVD H+AG+ V++D V +H K+ L FDGT + H P+ G
Sbjct: 309 FGTPDDFRALVDALHQAGIGVIVDWVPAHFPKDA-WALGRFDGT-PLYEHSDPKRGEQLD 366
Query: 1092 WDSRLFNYSEIEVLRFLLSNLRWYLDEYQFDGFRFDGVTSMLYHNHGCGEGFSGHYDEY- 1150
W + +F++ EV FL++N ++L E+ DG R D V SMLY ++ EG +
Sbjct: 367 WGTYVFDFGRPEVRNFLVANALYWLQEFHIDGLRVDAVASMLYLDYSRPEG------GWT 420
Query: 1151 ---FGLNVDTDALIYLMVANKFLHDKYPEIITIAEDVSGMPASCRPVTEGGTGFDY 1203
G + +A+ +L N H P I+TIAE+ + RP GG GF
Sbjct: 421 PNVHGGRENLEAVQFLQEMNATAHKVAPGIVTIAEESTPWSGVTRPTNIGGLGFSM 476
Score = 51.1 bits (123), Expect = 2e-06
Identities = 30/117 (25%), Positives = 39/117 (33%), Gaps = 18/117 (15%)
Query: 794 VCAAGDFNNWNREEFAYKKL-DFGKWELVLPPNPDGSCKLTHLSQVKLVVRNQHGHLLDR 852
V G+FN WN E + L G WEL P P K V G + DR
Sbjct: 150 VSLIGEFNGWNGHEAPMRVLGPSGVWELFWPDFPCDGL-------YKFRVHGADGVVTDR 202
Query: 853 LSPWATYVTEPP-----VVGHAYEQRIWNPKPQDKHKWTSSKPKKPDNLKIYESHVG 904
P+A PP V Y W + + + + YE H+G
Sbjct: 203 ADPFAFGTEVPPQTASRVTSSDYT---WGDDDWMAGRALRNPVNEA--MSTYEVHLG 254
Score = 40.3 bits (95), Expect = 0.004
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 117 YILTGVFGTPEQLKYLVDECHKAGL 141
Y T FGTP+ + LVD H+AG+
Sbjct: 303 YAPTSRFGTPDDFRALVDALHQAGI 327
Score = 39.9 bits (94), Expect = 0.006
Identities = 10/19 (52%), Positives = 14/19 (73%)
Query: 142 FGTPEQLKYLVDECHKAGL 160
FGTP+ + LVD H+AG+
Sbjct: 309 FGTPDDFRALVDALHQAGI 327
Score = 39.9 bits (94), Expect = 0.006
Identities = 10/19 (52%), Positives = 14/19 (73%)
Query: 161 FGTPEQLKYLVDECHKAGL 179
FGTP+ + LVD H+AG+
Sbjct: 309 FGTPDDFRALVDALHQAGI 327
Score = 39.9 bits (94), Expect = 0.006
Identities = 10/19 (52%), Positives = 14/19 (73%)
Query: 180 FGTPEQLKYLVDECHKAGL 198
FGTP+ + LVD H+AG+
Sbjct: 309 FGTPDDFRALVDALHQAGI 327
Score = 39.9 bits (94), Expect = 0.006
Identities = 10/19 (52%), Positives = 14/19 (73%)
Query: 199 FGTPEQLKYLVDECHKAGL 217
FGTP+ + LVD H+AG+
Sbjct: 309 FGTPDDFRALVDALHQAGI 327
Score = 39.9 bits (94), Expect = 0.006
Identities = 10/19 (52%), Positives = 14/19 (73%)
Query: 218 FGTPEQLKYLVDECHKAGL 236
FGTP+ + LVD H+AG+
Sbjct: 309 FGTPDDFRALVDALHQAGI 327
Score = 39.9 bits (94), Expect = 0.006
Identities = 10/19 (52%), Positives = 14/19 (73%)
Query: 237 FGTPEQLKYLVDECHKAGL 255
FGTP+ + LVD H+AG+
Sbjct: 309 FGTPDDFRALVDALHQAGI 327
Score = 39.9 bits (94), Expect = 0.006
Identities = 10/19 (52%), Positives = 14/19 (73%)
Query: 256 FGTPEQLKYLVDECHKAGL 274
FGTP+ + LVD H+AG+
Sbjct: 309 FGTPDDFRALVDALHQAGI 327
Score = 39.9 bits (94), Expect = 0.006
Identities = 10/19 (52%), Positives = 14/19 (73%)
Query: 275 FGTPEQLKYLVDECHKAGL 293
FGTP+ + LVD H+AG+
Sbjct: 309 FGTPDDFRALVDALHQAGI 327
Score = 39.9 bits (94), Expect = 0.006
Identities = 10/19 (52%), Positives = 14/19 (73%)
Query: 294 FGTPEQLKYLVDECHKAGL 312
FGTP+ + LVD H+AG+
Sbjct: 309 FGTPDDFRALVDALHQAGI 327
Score = 39.9 bits (94), Expect = 0.006
Identities = 10/19 (52%), Positives = 14/19 (73%)
Query: 313 FGTPEQLKYLVDECHKAGL 331
FGTP+ + LVD H+AG+
Sbjct: 309 FGTPDDFRALVDALHQAGI 327
Score = 39.9 bits (94), Expect = 0.006
Identities = 10/19 (52%), Positives = 14/19 (73%)
Query: 332 FGTPEQLKYLVDECHKAGL 350
FGTP+ + LVD H+AG+
Sbjct: 309 FGTPDDFRALVDALHQAGI 327
Score = 39.9 bits (94), Expect = 0.006
Identities = 10/19 (52%), Positives = 14/19 (73%)
Query: 351 FGTPEQLKYLVDECHKAGL 369
FGTP+ + LVD H+AG+
Sbjct: 309 FGTPDDFRALVDALHQAGI 327
Score = 39.9 bits (94), Expect = 0.006
Identities = 10/19 (52%), Positives = 14/19 (73%)
Query: 370 FGTPEQLKYLVDECHKAGL 388
FGTP+ + LVD H+AG+
Sbjct: 309 FGTPDDFRALVDALHQAGI 327
Score = 39.9 bits (94), Expect = 0.006
Identities = 10/19 (52%), Positives = 14/19 (73%)
Query: 389 FGTPEQLKYLVDECHKAGL 407
FGTP+ + LVD H+AG+
Sbjct: 309 FGTPDDFRALVDALHQAGI 327
Score = 39.9 bits (94), Expect = 0.006
Identities = 10/19 (52%), Positives = 14/19 (73%)
Query: 408 FGTPEQLKYLVDECHKAGL 426
FGTP+ + LVD H+AG+
Sbjct: 309 FGTPDDFRALVDALHQAGI 327
Score = 39.9 bits (94), Expect = 0.006
Identities = 10/19 (52%), Positives = 14/19 (73%)
Query: 427 FGTPEQLKYLVDECHKAGL 445
FGTP+ + LVD H+AG+
Sbjct: 309 FGTPDDFRALVDALHQAGI 327
Score = 39.9 bits (94), Expect = 0.006
Identities = 10/19 (52%), Positives = 14/19 (73%)
Query: 446 FGTPEQLKYLVDECHKAGL 464
FGTP+ + LVD H+AG+
Sbjct: 309 FGTPDDFRALVDALHQAGI 327
Score = 39.9 bits (94), Expect = 0.006
Identities = 10/19 (52%), Positives = 14/19 (73%)
Query: 465 FGTPEQLKYLVDECHKAGL 483
FGTP+ + LVD H+AG+
Sbjct: 309 FGTPDDFRALVDALHQAGI 327
Score = 39.9 bits (94), Expect = 0.006
Identities = 10/19 (52%), Positives = 14/19 (73%)
Query: 484 FGTPEQLKYLVDECHKAGL 502
FGTP+ + LVD H+AG+
Sbjct: 309 FGTPDDFRALVDALHQAGI 327
Score = 39.9 bits (94), Expect = 0.006
Identities = 10/19 (52%), Positives = 14/19 (73%)
Query: 503 FGTPEQLKYLVDECHKAGL 521
FGTP+ + LVD H+AG+
Sbjct: 309 FGTPDDFRALVDALHQAGI 327
Score = 39.9 bits (94), Expect = 0.006
Identities = 10/19 (52%), Positives = 14/19 (73%)
Query: 522 FGTPEQLKYLVDECHKAGL 540
FGTP+ + LVD H+AG+
Sbjct: 309 FGTPDDFRALVDALHQAGI 327
Score = 39.9 bits (94), Expect = 0.006
Identities = 10/19 (52%), Positives = 14/19 (73%)
Query: 541 FGTPEQLKYLVDECHKAGL 559
FGTP+ + LVD H+AG+
Sbjct: 309 FGTPDDFRALVDALHQAGI 327
Score = 39.9 bits (94), Expect = 0.006
Identities = 10/19 (52%), Positives = 14/19 (73%)
Query: 560 FGTPEQLKYLVDECHKAGL 578
FGTP+ + LVD H+AG+
Sbjct: 309 FGTPDDFRALVDALHQAGI 327
Score = 39.9 bits (94), Expect = 0.006
Identities = 10/19 (52%), Positives = 14/19 (73%)
Query: 579 FGTPEQLKYLVDECHKAGL 597
FGTP+ + LVD H+AG+
Sbjct: 309 FGTPDDFRALVDALHQAGI 327
Score = 39.9 bits (94), Expect = 0.006
Identities = 10/19 (52%), Positives = 14/19 (73%)
Query: 598 FGTPEQLKYLVDECHKAGL 616
FGTP+ + LVD H+AG+
Sbjct: 309 FGTPDDFRALVDALHQAGI 327
Score = 39.9 bits (94), Expect = 0.006
Identities = 10/19 (52%), Positives = 14/19 (73%)
Query: 617 FGTPEQLKYLVDECHKAGL 635
FGTP+ + LVD H+AG+
Sbjct: 309 FGTPDDFRALVDALHQAGI 327
Score = 39.9 bits (94), Expect = 0.006
Identities = 10/19 (52%), Positives = 14/19 (73%)
Query: 636 FGTPEQLKYLVDECHKAGL 654
FGTP+ + LVD H+AG+
Sbjct: 309 FGTPDDFRALVDALHQAGI 327
Score = 39.9 bits (94), Expect = 0.006
Identities = 10/19 (52%), Positives = 14/19 (73%)
Query: 655 FGTPEQLKYLVDECHKAGL 673
FGTP+ + LVD H+AG+
Sbjct: 309 FGTPDDFRALVDALHQAGI 327
Score = 39.9 bits (94), Expect = 0.006
Identities = 10/19 (52%), Positives = 14/19 (73%)
Query: 674 FGTPEQLKYLVDECHKAGL 692
FGTP+ + LVD H+AG+
Sbjct: 309 FGTPDDFRALVDALHQAGI 327
Score = 39.9 bits (94), Expect = 0.006
Identities = 10/19 (52%), Positives = 14/19 (73%)
Query: 693 FGTPEQLKYLVDECHKAGL 711
FGTP+ + LVD H+AG+
Sbjct: 309 FGTPDDFRALVDALHQAGI 327
Score = 39.9 bits (94), Expect = 0.006
Identities = 10/19 (52%), Positives = 14/19 (73%)
Query: 712 FGTPEQLKYLVDECHKAGL 730
FGTP+ + LVD H+AG+
Sbjct: 309 FGTPDDFRALVDALHQAGI 327
Score = 39.9 bits (94), Expect = 0.006
Identities = 10/19 (52%), Positives = 14/19 (73%)
Query: 731 FGTPEQLKYLVDECHKAGL 749
FGTP+ + LVD H+AG+
Sbjct: 309 FGTPDDFRALVDALHQAGI 327
Score = 39.9 bits (94), Expect = 0.006
Identities = 10/19 (52%), Positives = 14/19 (73%)
Query: 750 FGTPEQLKYLVDECHKAGL 768
FGTP+ + LVD H+AG+
Sbjct: 309 FGTPDDFRALVDALHQAGI 327
Score = 39.9 bits (94), Expect = 0.006
Identities = 10/19 (52%), Positives = 14/19 (73%)
Query: 769 FGTPEQLKYLVDECHKAGL 787
FGTP+ + LVD H+AG+
Sbjct: 309 FGTPDDFRALVDALHQAGI 327
>2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase,
protein-carbohydrate complex, desiccation resistance;
HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP:
b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A*
2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A*
Length = 602
Score = 110 bits (276), Expect = 9e-25
Identities = 35/106 (33%), Positives = 49/106 (46%), Gaps = 14/106 (13%)
Query: 1033 FGTPEQLKYLVDECHKAGLYVLLDVVHSH--ASKNVLDGLNEFDGTQACFFHDGPRGTHP 1090
+G PE L LVD H+ GL V LDVV++H S N L+ + + +F D
Sbjct: 189 YGRPEDLMALVDAAHRLGLGVFLDVVYNHFGPSGN---YLSSYAPS---YFTDRF---SS 239
Query: 1091 LWDSRLFNYSEIEVLRFLLSN-LRWYLDEYQFDGFRFDGVTSMLYH 1135
W +Y+E + R++ N W L +Y FDG R D M
Sbjct: 240 AWGM-GLDYAEPHMRRYVTGNARMW-LRDYHFDGLRLDATPYMTDD 283
Score = 43.8 bits (104), Expect = 3e-04
Identities = 13/28 (46%), Positives = 16/28 (57%)
Query: 769 FGTPEQLKYLVDECHKAGLLCFMHVVCA 796
+G PE L LVD H+ GL F+ VV
Sbjct: 189 YGRPEDLMALVDAAHRLGLGVFLDVVYN 216
Score = 41.9 bits (99), Expect = 0.001
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 123 FGTPEQLKYLVDECHKAGL 141
+G PE L LVD H+ GL
Sbjct: 189 YGRPEDLMALVDAAHRLGL 207
Score = 41.9 bits (99), Expect = 0.001
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 142 FGTPEQLKYLVDECHKAGL 160
+G PE L LVD H+ GL
Sbjct: 189 YGRPEDLMALVDAAHRLGL 207
Score = 41.9 bits (99), Expect = 0.001
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 161 FGTPEQLKYLVDECHKAGL 179
+G PE L LVD H+ GL
Sbjct: 189 YGRPEDLMALVDAAHRLGL 207
Score = 41.9 bits (99), Expect = 0.001
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 180 FGTPEQLKYLVDECHKAGL 198
+G PE L LVD H+ GL
Sbjct: 189 YGRPEDLMALVDAAHRLGL 207
Score = 41.9 bits (99), Expect = 0.001
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 199 FGTPEQLKYLVDECHKAGL 217
+G PE L LVD H+ GL
Sbjct: 189 YGRPEDLMALVDAAHRLGL 207
Score = 41.9 bits (99), Expect = 0.001
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 218 FGTPEQLKYLVDECHKAGL 236
+G PE L LVD H+ GL
Sbjct: 189 YGRPEDLMALVDAAHRLGL 207
Score = 41.9 bits (99), Expect = 0.001
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 237 FGTPEQLKYLVDECHKAGL 255
+G PE L LVD H+ GL
Sbjct: 189 YGRPEDLMALVDAAHRLGL 207
Score = 41.9 bits (99), Expect = 0.001
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 256 FGTPEQLKYLVDECHKAGL 274
+G PE L LVD H+ GL
Sbjct: 189 YGRPEDLMALVDAAHRLGL 207
Score = 41.9 bits (99), Expect = 0.001
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 275 FGTPEQLKYLVDECHKAGL 293
+G PE L LVD H+ GL
Sbjct: 189 YGRPEDLMALVDAAHRLGL 207
Score = 41.9 bits (99), Expect = 0.001
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 294 FGTPEQLKYLVDECHKAGL 312
+G PE L LVD H+ GL
Sbjct: 189 YGRPEDLMALVDAAHRLGL 207
Score = 41.9 bits (99), Expect = 0.001
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 313 FGTPEQLKYLVDECHKAGL 331
+G PE L LVD H+ GL
Sbjct: 189 YGRPEDLMALVDAAHRLGL 207
Score = 41.9 bits (99), Expect = 0.001
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 332 FGTPEQLKYLVDECHKAGL 350
+G PE L LVD H+ GL
Sbjct: 189 YGRPEDLMALVDAAHRLGL 207
Score = 41.9 bits (99), Expect = 0.001
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 351 FGTPEQLKYLVDECHKAGL 369
+G PE L LVD H+ GL
Sbjct: 189 YGRPEDLMALVDAAHRLGL 207
Score = 41.9 bits (99), Expect = 0.001
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 370 FGTPEQLKYLVDECHKAGL 388
+G PE L LVD H+ GL
Sbjct: 189 YGRPEDLMALVDAAHRLGL 207
Score = 41.9 bits (99), Expect = 0.001
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 389 FGTPEQLKYLVDECHKAGL 407
+G PE L LVD H+ GL
Sbjct: 189 YGRPEDLMALVDAAHRLGL 207
Score = 41.9 bits (99), Expect = 0.001
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 408 FGTPEQLKYLVDECHKAGL 426
+G PE L LVD H+ GL
Sbjct: 189 YGRPEDLMALVDAAHRLGL 207
Score = 41.9 bits (99), Expect = 0.001
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 427 FGTPEQLKYLVDECHKAGL 445
+G PE L LVD H+ GL
Sbjct: 189 YGRPEDLMALVDAAHRLGL 207
Score = 41.9 bits (99), Expect = 0.001
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 446 FGTPEQLKYLVDECHKAGL 464
+G PE L LVD H+ GL
Sbjct: 189 YGRPEDLMALVDAAHRLGL 207
Score = 41.9 bits (99), Expect = 0.001
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 465 FGTPEQLKYLVDECHKAGL 483
+G PE L LVD H+ GL
Sbjct: 189 YGRPEDLMALVDAAHRLGL 207
Score = 41.9 bits (99), Expect = 0.001
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 484 FGTPEQLKYLVDECHKAGL 502
+G PE L LVD H+ GL
Sbjct: 189 YGRPEDLMALVDAAHRLGL 207
Score = 41.9 bits (99), Expect = 0.001
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 503 FGTPEQLKYLVDECHKAGL 521
+G PE L LVD H+ GL
Sbjct: 189 YGRPEDLMALVDAAHRLGL 207
Score = 41.9 bits (99), Expect = 0.001
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 522 FGTPEQLKYLVDECHKAGL 540
+G PE L LVD H+ GL
Sbjct: 189 YGRPEDLMALVDAAHRLGL 207
Score = 41.9 bits (99), Expect = 0.001
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 541 FGTPEQLKYLVDECHKAGL 559
+G PE L LVD H+ GL
Sbjct: 189 YGRPEDLMALVDAAHRLGL 207
Score = 41.9 bits (99), Expect = 0.001
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 560 FGTPEQLKYLVDECHKAGL 578
+G PE L LVD H+ GL
Sbjct: 189 YGRPEDLMALVDAAHRLGL 207
Score = 41.9 bits (99), Expect = 0.001
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 579 FGTPEQLKYLVDECHKAGL 597
+G PE L LVD H+ GL
Sbjct: 189 YGRPEDLMALVDAAHRLGL 207
Score = 41.9 bits (99), Expect = 0.001
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 598 FGTPEQLKYLVDECHKAGL 616
+G PE L LVD H+ GL
Sbjct: 189 YGRPEDLMALVDAAHRLGL 207
Score = 41.9 bits (99), Expect = 0.001
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 617 FGTPEQLKYLVDECHKAGL 635
+G PE L LVD H+ GL
Sbjct: 189 YGRPEDLMALVDAAHRLGL 207
Score = 41.9 bits (99), Expect = 0.001
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 636 FGTPEQLKYLVDECHKAGL 654
+G PE L LVD H+ GL
Sbjct: 189 YGRPEDLMALVDAAHRLGL 207
Score = 41.9 bits (99), Expect = 0.001
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 655 FGTPEQLKYLVDECHKAGL 673
+G PE L LVD H+ GL
Sbjct: 189 YGRPEDLMALVDAAHRLGL 207
Score = 41.9 bits (99), Expect = 0.001
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 674 FGTPEQLKYLVDECHKAGL 692
+G PE L LVD H+ GL
Sbjct: 189 YGRPEDLMALVDAAHRLGL 207
Score = 41.9 bits (99), Expect = 0.001
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 693 FGTPEQLKYLVDECHKAGL 711
+G PE L LVD H+ GL
Sbjct: 189 YGRPEDLMALVDAAHRLGL 207
Score = 41.9 bits (99), Expect = 0.001
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 712 FGTPEQLKYLVDECHKAGL 730
+G PE L LVD H+ GL
Sbjct: 189 YGRPEDLMALVDAAHRLGL 207
Score = 41.9 bits (99), Expect = 0.001
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 731 FGTPEQLKYLVDECHKAGL 749
+G PE L LVD H+ GL
Sbjct: 189 YGRPEDLMALVDAAHRLGL 207
Score = 41.9 bits (99), Expect = 0.001
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 750 FGTPEQLKYLVDECHKAGL 768
+G PE L LVD H+ GL
Sbjct: 189 YGRPEDLMALVDAAHRLGL 207
>3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center
for structural genomics of infectious diseases, unknown
function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica
subsp}
Length = 618
Score = 107 bits (270), Expect = 5e-24
Identities = 40/177 (22%), Positives = 62/177 (35%), Gaps = 39/177 (22%)
Query: 1033 FGTPEQLKYLVDECHKAGLYVLLDVVHSHASKNVLDG--LNEFDGTQACFFHDGPRGTHP 1090
+GTP+ K +D H GL V+LD+V +H +G L FFH
Sbjct: 199 YGTPDDFKAFIDAAHGYGLSVVLDIVLNHFGP---EGNYLPLLAPA---FFHKER---MT 249
Query: 1091 LWDSRLFNYSEIEVLRFLLSN-LRWYLDEYQFDGFRFDGVTSMLYHNHGCGEGFSGHYDE 1149
W + Y V R+++ L W L EY DG RFD + +
Sbjct: 250 PWGN-GIAYDVDAVRRYIIEAPLYW-LTEYHLDGLRFDAIDQI----------------- 290
Query: 1150 YFGLNVDTDALIYLMVANKFLHDKYPE--IITIAEDVSGMPASCRPVTEG-GTGFDY 1203
D+ A L+ + + + + I ED + + +G F
Sbjct: 291 -----EDSSARHVLVEIAQRIREDITDRPIHLTTEDSRNIISLHPRDQDGNAPLFTA 342
Score = 43.4 bits (103), Expect = 4e-04
Identities = 9/28 (32%), Positives = 14/28 (50%)
Query: 769 FGTPEQLKYLVDECHKAGLLCFMHVVCA 796
+GTP+ K +D H GL + +V
Sbjct: 199 YGTPDDFKAFIDAAHGYGLSVVLDIVLN 226
Score = 41.5 bits (98), Expect = 0.002
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 123 FGTPEQLKYLVDECHKAGL 141
+GTP+ K +D H GL
Sbjct: 199 YGTPDDFKAFIDAAHGYGL 217
Score = 41.5 bits (98), Expect = 0.002
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 142 FGTPEQLKYLVDECHKAGL 160
+GTP+ K +D H GL
Sbjct: 199 YGTPDDFKAFIDAAHGYGL 217
Score = 41.5 bits (98), Expect = 0.002
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 161 FGTPEQLKYLVDECHKAGL 179
+GTP+ K +D H GL
Sbjct: 199 YGTPDDFKAFIDAAHGYGL 217
Score = 41.5 bits (98), Expect = 0.002
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 180 FGTPEQLKYLVDECHKAGL 198
+GTP+ K +D H GL
Sbjct: 199 YGTPDDFKAFIDAAHGYGL 217
Score = 41.5 bits (98), Expect = 0.002
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 199 FGTPEQLKYLVDECHKAGL 217
+GTP+ K +D H GL
Sbjct: 199 YGTPDDFKAFIDAAHGYGL 217
Score = 41.5 bits (98), Expect = 0.002
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 218 FGTPEQLKYLVDECHKAGL 236
+GTP+ K +D H GL
Sbjct: 199 YGTPDDFKAFIDAAHGYGL 217
Score = 41.5 bits (98), Expect = 0.002
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 237 FGTPEQLKYLVDECHKAGL 255
+GTP+ K +D H GL
Sbjct: 199 YGTPDDFKAFIDAAHGYGL 217
Score = 41.5 bits (98), Expect = 0.002
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 256 FGTPEQLKYLVDECHKAGL 274
+GTP+ K +D H GL
Sbjct: 199 YGTPDDFKAFIDAAHGYGL 217
Score = 41.5 bits (98), Expect = 0.002
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 275 FGTPEQLKYLVDECHKAGL 293
+GTP+ K +D H GL
Sbjct: 199 YGTPDDFKAFIDAAHGYGL 217
Score = 41.5 bits (98), Expect = 0.002
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 294 FGTPEQLKYLVDECHKAGL 312
+GTP+ K +D H GL
Sbjct: 199 YGTPDDFKAFIDAAHGYGL 217
Score = 41.5 bits (98), Expect = 0.002
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 313 FGTPEQLKYLVDECHKAGL 331
+GTP+ K +D H GL
Sbjct: 199 YGTPDDFKAFIDAAHGYGL 217
Score = 41.5 bits (98), Expect = 0.002
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 332 FGTPEQLKYLVDECHKAGL 350
+GTP+ K +D H GL
Sbjct: 199 YGTPDDFKAFIDAAHGYGL 217
Score = 41.5 bits (98), Expect = 0.002
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 351 FGTPEQLKYLVDECHKAGL 369
+GTP+ K +D H GL
Sbjct: 199 YGTPDDFKAFIDAAHGYGL 217
Score = 41.5 bits (98), Expect = 0.002
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 370 FGTPEQLKYLVDECHKAGL 388
+GTP+ K +D H GL
Sbjct: 199 YGTPDDFKAFIDAAHGYGL 217
Score = 41.5 bits (98), Expect = 0.002
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 389 FGTPEQLKYLVDECHKAGL 407
+GTP+ K +D H GL
Sbjct: 199 YGTPDDFKAFIDAAHGYGL 217
Score = 41.5 bits (98), Expect = 0.002
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 408 FGTPEQLKYLVDECHKAGL 426
+GTP+ K +D H GL
Sbjct: 199 YGTPDDFKAFIDAAHGYGL 217
Score = 41.5 bits (98), Expect = 0.002
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 427 FGTPEQLKYLVDECHKAGL 445
+GTP+ K +D H GL
Sbjct: 199 YGTPDDFKAFIDAAHGYGL 217
Score = 41.5 bits (98), Expect = 0.002
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 446 FGTPEQLKYLVDECHKAGL 464
+GTP+ K +D H GL
Sbjct: 199 YGTPDDFKAFIDAAHGYGL 217
Score = 41.5 bits (98), Expect = 0.002
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 465 FGTPEQLKYLVDECHKAGL 483
+GTP+ K +D H GL
Sbjct: 199 YGTPDDFKAFIDAAHGYGL 217
Score = 41.5 bits (98), Expect = 0.002
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 484 FGTPEQLKYLVDECHKAGL 502
+GTP+ K +D H GL
Sbjct: 199 YGTPDDFKAFIDAAHGYGL 217
Score = 41.5 bits (98), Expect = 0.002
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 503 FGTPEQLKYLVDECHKAGL 521
+GTP+ K +D H GL
Sbjct: 199 YGTPDDFKAFIDAAHGYGL 217
Score = 41.5 bits (98), Expect = 0.002
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 522 FGTPEQLKYLVDECHKAGL 540
+GTP+ K +D H GL
Sbjct: 199 YGTPDDFKAFIDAAHGYGL 217
Score = 41.5 bits (98), Expect = 0.002
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 541 FGTPEQLKYLVDECHKAGL 559
+GTP+ K +D H GL
Sbjct: 199 YGTPDDFKAFIDAAHGYGL 217
Score = 41.5 bits (98), Expect = 0.002
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 560 FGTPEQLKYLVDECHKAGL 578
+GTP+ K +D H GL
Sbjct: 199 YGTPDDFKAFIDAAHGYGL 217
Score = 41.5 bits (98), Expect = 0.002
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 579 FGTPEQLKYLVDECHKAGL 597
+GTP+ K +D H GL
Sbjct: 199 YGTPDDFKAFIDAAHGYGL 217
Score = 41.5 bits (98), Expect = 0.002
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 598 FGTPEQLKYLVDECHKAGL 616
+GTP+ K +D H GL
Sbjct: 199 YGTPDDFKAFIDAAHGYGL 217
Score = 41.5 bits (98), Expect = 0.002
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 617 FGTPEQLKYLVDECHKAGL 635
+GTP+ K +D H GL
Sbjct: 199 YGTPDDFKAFIDAAHGYGL 217
Score = 41.5 bits (98), Expect = 0.002
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 636 FGTPEQLKYLVDECHKAGL 654
+GTP+ K +D H GL
Sbjct: 199 YGTPDDFKAFIDAAHGYGL 217
Score = 41.5 bits (98), Expect = 0.002
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 655 FGTPEQLKYLVDECHKAGL 673
+GTP+ K +D H GL
Sbjct: 199 YGTPDDFKAFIDAAHGYGL 217
Score = 41.5 bits (98), Expect = 0.002
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 674 FGTPEQLKYLVDECHKAGL 692
+GTP+ K +D H GL
Sbjct: 199 YGTPDDFKAFIDAAHGYGL 217
Score = 41.5 bits (98), Expect = 0.002
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 693 FGTPEQLKYLVDECHKAGL 711
+GTP+ K +D H GL
Sbjct: 199 YGTPDDFKAFIDAAHGYGL 217
Score = 41.5 bits (98), Expect = 0.002
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 712 FGTPEQLKYLVDECHKAGL 730
+GTP+ K +D H GL
Sbjct: 199 YGTPDDFKAFIDAAHGYGL 217
Score = 41.5 bits (98), Expect = 0.002
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 731 FGTPEQLKYLVDECHKAGL 749
+GTP+ K +D H GL
Sbjct: 199 YGTPDDFKAFIDAAHGYGL 217
Score = 41.5 bits (98), Expect = 0.002
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 750 FGTPEQLKYLVDECHKAGL 768
+GTP+ K +D H GL
Sbjct: 199 YGTPDDFKAFIDAAHGYGL 217
>3vgf_A Malto-oligosyltrehalose trehalohydrolase; alpha/beta barrel,
alpha-amylas hydrolase; HET: GLC FLC; 2.30A {Sulfolobus
solfataricus} PDB: 3vge_A* 3vgd_A* 3vgb_A* 1eh9_A*
3vgh_A* 3vgg_A* 1eha_A
Length = 558
Score = 101 bits (253), Expect = 4e-22
Identities = 47/175 (26%), Positives = 67/175 (38%), Gaps = 38/175 (21%)
Query: 1033 FGTPEQLKYLVDECHKAGLYVLLDVVHSH--ASKNVLDGLNEFDGTQACFFHDGPRGTHP 1090
+G PE + LVDE HK GL V+LDVV++H N + + +F + P
Sbjct: 164 YGGPEGFRKLVDEAHKKGLGVILDVVYNHVGPEGN---YMVKLGP----YFSQ--KYKTP 214
Query: 1091 LWDSRLFNYSE-IEVLRFLLSN-LRWYLDEYQFDGFRFDGVTSMLYHNHGCGEGFSGHYD 1148
+ F+ +E EV +F+L N W + EY DGFR V +++
Sbjct: 215 WGLTFNFDDAESDEVRKFILENVEYW-IKEYNVDGFRLSAVHAII--------------- 258
Query: 1149 EYFGLNVDTDALIYLMVANKFLHDKYPEIITIAEDVSGMPASCRPVTEGGTGFDY 1203
DT L +H I IAE P P + G D
Sbjct: 259 -------DTSPKHILEEIADVVHK--YNRIVIAESDLNDPRVVNPKEKCGYNIDA 304
Score = 43.4 bits (103), Expect = 4e-04
Identities = 13/28 (46%), Positives = 16/28 (57%)
Query: 769 FGTPEQLKYLVDECHKAGLLCFMHVVCA 796
+G PE + LVDE HK GL + VV
Sbjct: 164 YGGPEGFRKLVDEAHKKGLGVILDVVYN 191
Score = 41.5 bits (98), Expect = 0.002
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 123 FGTPEQLKYLVDECHKAGL 141
+G PE + LVDE HK GL
Sbjct: 164 YGGPEGFRKLVDEAHKKGL 182
Score = 41.5 bits (98), Expect = 0.002
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 142 FGTPEQLKYLVDECHKAGL 160
+G PE + LVDE HK GL
Sbjct: 164 YGGPEGFRKLVDEAHKKGL 182
Score = 41.5 bits (98), Expect = 0.002
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 161 FGTPEQLKYLVDECHKAGL 179
+G PE + LVDE HK GL
Sbjct: 164 YGGPEGFRKLVDEAHKKGL 182
Score = 41.5 bits (98), Expect = 0.002
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 180 FGTPEQLKYLVDECHKAGL 198
+G PE + LVDE HK GL
Sbjct: 164 YGGPEGFRKLVDEAHKKGL 182
Score = 41.5 bits (98), Expect = 0.002
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 199 FGTPEQLKYLVDECHKAGL 217
+G PE + LVDE HK GL
Sbjct: 164 YGGPEGFRKLVDEAHKKGL 182
Score = 41.5 bits (98), Expect = 0.002
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 218 FGTPEQLKYLVDECHKAGL 236
+G PE + LVDE HK GL
Sbjct: 164 YGGPEGFRKLVDEAHKKGL 182
Score = 41.5 bits (98), Expect = 0.002
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 237 FGTPEQLKYLVDECHKAGL 255
+G PE + LVDE HK GL
Sbjct: 164 YGGPEGFRKLVDEAHKKGL 182
Score = 41.5 bits (98), Expect = 0.002
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 256 FGTPEQLKYLVDECHKAGL 274
+G PE + LVDE HK GL
Sbjct: 164 YGGPEGFRKLVDEAHKKGL 182
Score = 41.5 bits (98), Expect = 0.002
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 275 FGTPEQLKYLVDECHKAGL 293
+G PE + LVDE HK GL
Sbjct: 164 YGGPEGFRKLVDEAHKKGL 182
Score = 41.5 bits (98), Expect = 0.002
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 294 FGTPEQLKYLVDECHKAGL 312
+G PE + LVDE HK GL
Sbjct: 164 YGGPEGFRKLVDEAHKKGL 182
Score = 41.5 bits (98), Expect = 0.002
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 313 FGTPEQLKYLVDECHKAGL 331
+G PE + LVDE HK GL
Sbjct: 164 YGGPEGFRKLVDEAHKKGL 182
Score = 41.5 bits (98), Expect = 0.002
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 332 FGTPEQLKYLVDECHKAGL 350
+G PE + LVDE HK GL
Sbjct: 164 YGGPEGFRKLVDEAHKKGL 182
Score = 41.5 bits (98), Expect = 0.002
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 351 FGTPEQLKYLVDECHKAGL 369
+G PE + LVDE HK GL
Sbjct: 164 YGGPEGFRKLVDEAHKKGL 182
Score = 41.5 bits (98), Expect = 0.002
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 370 FGTPEQLKYLVDECHKAGL 388
+G PE + LVDE HK GL
Sbjct: 164 YGGPEGFRKLVDEAHKKGL 182
Score = 41.5 bits (98), Expect = 0.002
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 389 FGTPEQLKYLVDECHKAGL 407
+G PE + LVDE HK GL
Sbjct: 164 YGGPEGFRKLVDEAHKKGL 182
Score = 41.5 bits (98), Expect = 0.002
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 408 FGTPEQLKYLVDECHKAGL 426
+G PE + LVDE HK GL
Sbjct: 164 YGGPEGFRKLVDEAHKKGL 182
Score = 41.5 bits (98), Expect = 0.002
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 427 FGTPEQLKYLVDECHKAGL 445
+G PE + LVDE HK GL
Sbjct: 164 YGGPEGFRKLVDEAHKKGL 182
Score = 41.5 bits (98), Expect = 0.002
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 446 FGTPEQLKYLVDECHKAGL 464
+G PE + LVDE HK GL
Sbjct: 164 YGGPEGFRKLVDEAHKKGL 182
Score = 41.5 bits (98), Expect = 0.002
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 465 FGTPEQLKYLVDECHKAGL 483
+G PE + LVDE HK GL
Sbjct: 164 YGGPEGFRKLVDEAHKKGL 182
Score = 41.5 bits (98), Expect = 0.002
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 484 FGTPEQLKYLVDECHKAGL 502
+G PE + LVDE HK GL
Sbjct: 164 YGGPEGFRKLVDEAHKKGL 182
Score = 41.5 bits (98), Expect = 0.002
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 503 FGTPEQLKYLVDECHKAGL 521
+G PE + LVDE HK GL
Sbjct: 164 YGGPEGFRKLVDEAHKKGL 182
Score = 41.5 bits (98), Expect = 0.002
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 522 FGTPEQLKYLVDECHKAGL 540
+G PE + LVDE HK GL
Sbjct: 164 YGGPEGFRKLVDEAHKKGL 182
Score = 41.5 bits (98), Expect = 0.002
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 541 FGTPEQLKYLVDECHKAGL 559
+G PE + LVDE HK GL
Sbjct: 164 YGGPEGFRKLVDEAHKKGL 182
Score = 41.5 bits (98), Expect = 0.002
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 560 FGTPEQLKYLVDECHKAGL 578
+G PE + LVDE HK GL
Sbjct: 164 YGGPEGFRKLVDEAHKKGL 182
Score = 41.5 bits (98), Expect = 0.002
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 579 FGTPEQLKYLVDECHKAGL 597
+G PE + LVDE HK GL
Sbjct: 164 YGGPEGFRKLVDEAHKKGL 182
Score = 41.5 bits (98), Expect = 0.002
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 598 FGTPEQLKYLVDECHKAGL 616
+G PE + LVDE HK GL
Sbjct: 164 YGGPEGFRKLVDEAHKKGL 182
Score = 41.5 bits (98), Expect = 0.002
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 617 FGTPEQLKYLVDECHKAGL 635
+G PE + LVDE HK GL
Sbjct: 164 YGGPEGFRKLVDEAHKKGL 182
Score = 41.5 bits (98), Expect = 0.002
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 636 FGTPEQLKYLVDECHKAGL 654
+G PE + LVDE HK GL
Sbjct: 164 YGGPEGFRKLVDEAHKKGL 182
Score = 41.5 bits (98), Expect = 0.002
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 655 FGTPEQLKYLVDECHKAGL 673
+G PE + LVDE HK GL
Sbjct: 164 YGGPEGFRKLVDEAHKKGL 182
Score = 41.5 bits (98), Expect = 0.002
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 674 FGTPEQLKYLVDECHKAGL 692
+G PE + LVDE HK GL
Sbjct: 164 YGGPEGFRKLVDEAHKKGL 182
Score = 41.5 bits (98), Expect = 0.002
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 693 FGTPEQLKYLVDECHKAGL 711
+G PE + LVDE HK GL
Sbjct: 164 YGGPEGFRKLVDEAHKKGL 182
Score = 41.5 bits (98), Expect = 0.002
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 712 FGTPEQLKYLVDECHKAGL 730
+G PE + LVDE HK GL
Sbjct: 164 YGGPEGFRKLVDEAHKKGL 182
Score = 41.5 bits (98), Expect = 0.002
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 731 FGTPEQLKYLVDECHKAGL 749
+G PE + LVDE HK GL
Sbjct: 164 YGGPEGFRKLVDEAHKKGL 182
Score = 41.5 bits (98), Expect = 0.002
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 750 FGTPEQLKYLVDECHKAGL 768
+G PE + LVDE HK GL
Sbjct: 164 YGGPEGFRKLVDEAHKKGL 182
Score = 29.9 bits (68), Expect = 6.5
Identities = 19/114 (16%), Positives = 37/114 (32%), Gaps = 29/114 (25%)
Query: 801 NNWNREEFAYKKLDFGKWELVLPPNPDGSCKLTHLSQVKLVVRNQHGHLLDRLSPWATYV 860
+ + ++ + G + + L + K V+ + + D P + Y
Sbjct: 26 KVLEKGLYEMERDEKGYFTITLNNVKVRD-------RYKYVLDDASE-IPD---PASRYQ 74
Query: 861 TEPP-----VVGHAYEQRIWNPKPQDKHKWTSSKPKKPDNLKIYESHVGICTQE 909
E ++ + E +N + + L IYE HVG T E
Sbjct: 75 PEGVHGPSQIIQESKE---FN-----NETFLKKED-----LIIYEIHVGTFTPE 115
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet;
1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB:
1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A
1qpk_A*
Length = 527
Score = 80.1 bits (197), Expect = 2e-15
Identities = 34/199 (17%), Positives = 50/199 (25%), Gaps = 39/199 (19%)
Query: 1033 FGTPEQLKYLVDECHKAGLYVLLDVVHSH---ASKNVLDGLNEFDGTQACFFHDGPRGTH 1089
+G+ QL+ AG+ VL DVV +H + L G D +
Sbjct: 89 YGSDAQLRQAASALGGAGVKVLYDVVPNHMNRGYPDKEINLPAGQGFWRNDCADPGNYPN 148
Query: 1090 PLWDSRLF-------NYSEIEVLRFLLSNLRWYLDEYQFDGFRFDGVTSMLYHNHGCGEG 1142
D F N +V +Y GFRFD V
Sbjct: 149 DCDDGDRFIGGDADLNTGHPQVYGMFRDEFTNLRSQYGAGGFRFDFV------------- 195
Query: 1143 FSGHYDEYFGLNVDTDALIYLMVANKFLHDKYPEIITIAEDVSGMPASCRPVTEGGTGFD 1202
Y N ++ D + E G +
Sbjct: 196 --RGYAPER--------------VNSWMTDSADNSFCVGELWKGPSEYPNWDWRNTASWQ 239
Query: 1203 YRLVSLEGSALSALFDAAM 1221
+ A +FD A+
Sbjct: 240 QIIKDWSDRAKCPVFDFAL 258
Score = 34.3 bits (78), Expect = 0.28
Identities = 8/51 (15%), Positives = 13/51 (25%), Gaps = 4/51 (7%)
Query: 769 FGTPEQLKYLVDECHKAGLLCFMHVV----CAAGDFNNWNREEFAYKKLDF 815
+G+ QL+ AG+ VV N +
Sbjct: 89 YGSDAQLRQAASALGGAGVKVLYDVVPNHMNRGYPDKEINLPAGQGFWRND 139
Score = 30.8 bits (69), Expect = 3.0
Identities = 6/25 (24%), Positives = 11/25 (44%)
Query: 117 YILTGVFGTPEQLKYLVDECHKAGL 141
+ G +G+ QL+ AG+
Sbjct: 83 FNKNGRYGSDAQLRQAASALGGAGV 107
Score = 30.4 bits (68), Expect = 4.6
Identities = 5/19 (26%), Positives = 9/19 (47%)
Query: 142 FGTPEQLKYLVDECHKAGL 160
+G+ QL+ AG+
Sbjct: 89 YGSDAQLRQAASALGGAGV 107
Score = 30.4 bits (68), Expect = 4.6
Identities = 5/19 (26%), Positives = 9/19 (47%)
Query: 161 FGTPEQLKYLVDECHKAGL 179
+G+ QL+ AG+
Sbjct: 89 YGSDAQLRQAASALGGAGV 107
Score = 30.4 bits (68), Expect = 4.6
Identities = 5/19 (26%), Positives = 9/19 (47%)
Query: 180 FGTPEQLKYLVDECHKAGL 198
+G+ QL+ AG+
Sbjct: 89 YGSDAQLRQAASALGGAGV 107
Score = 30.4 bits (68), Expect = 4.6
Identities = 5/19 (26%), Positives = 9/19 (47%)
Query: 199 FGTPEQLKYLVDECHKAGL 217
+G+ QL+ AG+
Sbjct: 89 YGSDAQLRQAASALGGAGV 107
Score = 30.4 bits (68), Expect = 4.6
Identities = 5/19 (26%), Positives = 9/19 (47%)
Query: 218 FGTPEQLKYLVDECHKAGL 236
+G+ QL+ AG+
Sbjct: 89 YGSDAQLRQAASALGGAGV 107
Score = 30.4 bits (68), Expect = 4.6
Identities = 5/19 (26%), Positives = 9/19 (47%)
Query: 237 FGTPEQLKYLVDECHKAGL 255
+G+ QL+ AG+
Sbjct: 89 YGSDAQLRQAASALGGAGV 107
Score = 30.4 bits (68), Expect = 4.6
Identities = 5/19 (26%), Positives = 9/19 (47%)
Query: 256 FGTPEQLKYLVDECHKAGL 274
+G+ QL+ AG+
Sbjct: 89 YGSDAQLRQAASALGGAGV 107
Score = 30.4 bits (68), Expect = 4.6
Identities = 5/19 (26%), Positives = 9/19 (47%)
Query: 275 FGTPEQLKYLVDECHKAGL 293
+G+ QL+ AG+
Sbjct: 89 YGSDAQLRQAASALGGAGV 107
Score = 30.4 bits (68), Expect = 4.6
Identities = 5/19 (26%), Positives = 9/19 (47%)
Query: 294 FGTPEQLKYLVDECHKAGL 312
+G+ QL+ AG+
Sbjct: 89 YGSDAQLRQAASALGGAGV 107
Score = 30.4 bits (68), Expect = 4.6
Identities = 5/19 (26%), Positives = 9/19 (47%)
Query: 313 FGTPEQLKYLVDECHKAGL 331
+G+ QL+ AG+
Sbjct: 89 YGSDAQLRQAASALGGAGV 107
Score = 30.4 bits (68), Expect = 4.6
Identities = 5/19 (26%), Positives = 9/19 (47%)
Query: 332 FGTPEQLKYLVDECHKAGL 350
+G+ QL+ AG+
Sbjct: 89 YGSDAQLRQAASALGGAGV 107
Score = 30.4 bits (68), Expect = 4.6
Identities = 5/19 (26%), Positives = 9/19 (47%)
Query: 351 FGTPEQLKYLVDECHKAGL 369
+G+ QL+ AG+
Sbjct: 89 YGSDAQLRQAASALGGAGV 107
Score = 30.4 bits (68), Expect = 4.6
Identities = 5/19 (26%), Positives = 9/19 (47%)
Query: 370 FGTPEQLKYLVDECHKAGL 388
+G+ QL+ AG+
Sbjct: 89 YGSDAQLRQAASALGGAGV 107
Score = 30.4 bits (68), Expect = 4.6
Identities = 5/19 (26%), Positives = 9/19 (47%)
Query: 389 FGTPEQLKYLVDECHKAGL 407
+G+ QL+ AG+
Sbjct: 89 YGSDAQLRQAASALGGAGV 107
Score = 30.4 bits (68), Expect = 4.6
Identities = 5/19 (26%), Positives = 9/19 (47%)
Query: 408 FGTPEQLKYLVDECHKAGL 426
+G+ QL+ AG+
Sbjct: 89 YGSDAQLRQAASALGGAGV 107
Score = 30.4 bits (68), Expect = 4.6
Identities = 5/19 (26%), Positives = 9/19 (47%)
Query: 427 FGTPEQLKYLVDECHKAGL 445
+G+ QL+ AG+
Sbjct: 89 YGSDAQLRQAASALGGAGV 107
Score = 30.4 bits (68), Expect = 4.6
Identities = 5/19 (26%), Positives = 9/19 (47%)
Query: 446 FGTPEQLKYLVDECHKAGL 464
+G+ QL+ AG+
Sbjct: 89 YGSDAQLRQAASALGGAGV 107
Score = 30.4 bits (68), Expect = 4.6
Identities = 5/19 (26%), Positives = 9/19 (47%)
Query: 465 FGTPEQLKYLVDECHKAGL 483
+G+ QL+ AG+
Sbjct: 89 YGSDAQLRQAASALGGAGV 107
Score = 30.4 bits (68), Expect = 4.6
Identities = 5/19 (26%), Positives = 9/19 (47%)
Query: 484 FGTPEQLKYLVDECHKAGL 502
+G+ QL+ AG+
Sbjct: 89 YGSDAQLRQAASALGGAGV 107
Score = 30.4 bits (68), Expect = 4.6
Identities = 5/19 (26%), Positives = 9/19 (47%)
Query: 503 FGTPEQLKYLVDECHKAGL 521
+G+ QL+ AG+
Sbjct: 89 YGSDAQLRQAASALGGAGV 107
Score = 30.4 bits (68), Expect = 4.6
Identities = 5/19 (26%), Positives = 9/19 (47%)
Query: 522 FGTPEQLKYLVDECHKAGL 540
+G+ QL+ AG+
Sbjct: 89 YGSDAQLRQAASALGGAGV 107
Score = 30.4 bits (68), Expect = 4.6
Identities = 5/19 (26%), Positives = 9/19 (47%)
Query: 541 FGTPEQLKYLVDECHKAGL 559
+G+ QL+ AG+
Sbjct: 89 YGSDAQLRQAASALGGAGV 107
Score = 30.4 bits (68), Expect = 4.6
Identities = 5/19 (26%), Positives = 9/19 (47%)
Query: 560 FGTPEQLKYLVDECHKAGL 578
+G+ QL+ AG+
Sbjct: 89 YGSDAQLRQAASALGGAGV 107
Score = 30.4 bits (68), Expect = 4.6
Identities = 5/19 (26%), Positives = 9/19 (47%)
Query: 579 FGTPEQLKYLVDECHKAGL 597
+G+ QL+ AG+
Sbjct: 89 YGSDAQLRQAASALGGAGV 107
Score = 30.4 bits (68), Expect = 4.6
Identities = 5/19 (26%), Positives = 9/19 (47%)
Query: 598 FGTPEQLKYLVDECHKAGL 616
+G+ QL+ AG+
Sbjct: 89 YGSDAQLRQAASALGGAGV 107
Score = 30.4 bits (68), Expect = 4.6
Identities = 5/19 (26%), Positives = 9/19 (47%)
Query: 617 FGTPEQLKYLVDECHKAGL 635
+G+ QL+ AG+
Sbjct: 89 YGSDAQLRQAASALGGAGV 107
Score = 30.4 bits (68), Expect = 4.6
Identities = 5/19 (26%), Positives = 9/19 (47%)
Query: 636 FGTPEQLKYLVDECHKAGL 654
+G+ QL+ AG+
Sbjct: 89 YGSDAQLRQAASALGGAGV 107
Score = 30.4 bits (68), Expect = 4.6
Identities = 5/19 (26%), Positives = 9/19 (47%)
Query: 655 FGTPEQLKYLVDECHKAGL 673
+G+ QL+ AG+
Sbjct: 89 YGSDAQLRQAASALGGAGV 107
Score = 30.4 bits (68), Expect = 4.6
Identities = 5/19 (26%), Positives = 9/19 (47%)
Query: 674 FGTPEQLKYLVDECHKAGL 692
+G+ QL+ AG+
Sbjct: 89 YGSDAQLRQAASALGGAGV 107
Score = 30.4 bits (68), Expect = 4.6
Identities = 5/19 (26%), Positives = 9/19 (47%)
Query: 693 FGTPEQLKYLVDECHKAGL 711
+G+ QL+ AG+
Sbjct: 89 YGSDAQLRQAASALGGAGV 107
Score = 30.4 bits (68), Expect = 4.6
Identities = 5/19 (26%), Positives = 9/19 (47%)
Query: 712 FGTPEQLKYLVDECHKAGL 730
+G+ QL+ AG+
Sbjct: 89 YGSDAQLRQAASALGGAGV 107
Score = 30.4 bits (68), Expect = 4.6
Identities = 5/19 (26%), Positives = 9/19 (47%)
Query: 731 FGTPEQLKYLVDECHKAGL 749
+G+ QL+ AG+
Sbjct: 89 YGSDAQLRQAASALGGAGV 107
Score = 30.4 bits (68), Expect = 4.6
Identities = 5/19 (26%), Positives = 9/19 (47%)
Query: 750 FGTPEQLKYLVDECHKAGL 768
+G+ QL+ AG+
Sbjct: 89 YGSDAQLRQAASALGGAGV 107
>1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A
{Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1
b.71.1.1 c.1.8.1
Length = 680
Score = 69.5 bits (170), Expect = 4e-12
Identities = 25/119 (21%), Positives = 43/119 (36%), Gaps = 25/119 (21%)
Query: 1033 FGTPEQLKYLVDECHKAGLYVLLDVVHSHAS------KNVLDGLNEFDG----------T 1076
FGT + LVD H G+ V++D +H S + ++ +D
Sbjct: 108 FGTLSDFQRLVDAAHAKGIKVIIDFAPNHTSPASETNPSYMENGRLYDNGTLLGGYTNDA 167
Query: 1077 QACFFHDGPRGTHPLWDSRL--------FNYSEIEVLRFLLSNLRWYLDEYQFDGFRFD 1127
F H+G L D N+ + R+L ++ ++ + DG R D
Sbjct: 168 NMYFHHNGGTTFSSLEDGIYRNLFDLADLNHQNPVIDRYLKDAVKMWI-DMGIDGIRMD 225
Score = 34.4 bits (79), Expect = 0.26
Identities = 9/26 (34%), Positives = 12/26 (46%), Gaps = 4/26 (15%)
Query: 769 FGTPEQLKYLVDECHKAGLLCFMHVV 794
FGT + LVD H G + V+
Sbjct: 108 FGTLSDFQRLVDAAHAKG----IKVI 129
Score = 33.3 bits (76), Expect = 0.69
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 123 FGTPEQLKYLVDECHKAGL 141
FGT + LVD H G+
Sbjct: 108 FGTLSDFQRLVDAAHAKGI 126
Score = 33.3 bits (76), Expect = 0.69
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 142 FGTPEQLKYLVDECHKAGL 160
FGT + LVD H G+
Sbjct: 108 FGTLSDFQRLVDAAHAKGI 126
Score = 33.3 bits (76), Expect = 0.69
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 161 FGTPEQLKYLVDECHKAGL 179
FGT + LVD H G+
Sbjct: 108 FGTLSDFQRLVDAAHAKGI 126
Score = 33.3 bits (76), Expect = 0.69
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 180 FGTPEQLKYLVDECHKAGL 198
FGT + LVD H G+
Sbjct: 108 FGTLSDFQRLVDAAHAKGI 126
Score = 33.3 bits (76), Expect = 0.69
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 199 FGTPEQLKYLVDECHKAGL 217
FGT + LVD H G+
Sbjct: 108 FGTLSDFQRLVDAAHAKGI 126
Score = 33.3 bits (76), Expect = 0.69
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 218 FGTPEQLKYLVDECHKAGL 236
FGT + LVD H G+
Sbjct: 108 FGTLSDFQRLVDAAHAKGI 126
Score = 33.3 bits (76), Expect = 0.69
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 237 FGTPEQLKYLVDECHKAGL 255
FGT + LVD H G+
Sbjct: 108 FGTLSDFQRLVDAAHAKGI 126
Score = 33.3 bits (76), Expect = 0.69
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 256 FGTPEQLKYLVDECHKAGL 274
FGT + LVD H G+
Sbjct: 108 FGTLSDFQRLVDAAHAKGI 126
Score = 33.3 bits (76), Expect = 0.69
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 275 FGTPEQLKYLVDECHKAGL 293
FGT + LVD H G+
Sbjct: 108 FGTLSDFQRLVDAAHAKGI 126
Score = 33.3 bits (76), Expect = 0.69
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 294 FGTPEQLKYLVDECHKAGL 312
FGT + LVD H G+
Sbjct: 108 FGTLSDFQRLVDAAHAKGI 126
Score = 33.3 bits (76), Expect = 0.69
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 313 FGTPEQLKYLVDECHKAGL 331
FGT + LVD H G+
Sbjct: 108 FGTLSDFQRLVDAAHAKGI 126
Score = 33.3 bits (76), Expect = 0.69
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 332 FGTPEQLKYLVDECHKAGL 350
FGT + LVD H G+
Sbjct: 108 FGTLSDFQRLVDAAHAKGI 126
Score = 33.3 bits (76), Expect = 0.69
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 351 FGTPEQLKYLVDECHKAGL 369
FGT + LVD H G+
Sbjct: 108 FGTLSDFQRLVDAAHAKGI 126
Score = 33.3 bits (76), Expect = 0.69
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 370 FGTPEQLKYLVDECHKAGL 388
FGT + LVD H G+
Sbjct: 108 FGTLSDFQRLVDAAHAKGI 126
Score = 33.3 bits (76), Expect = 0.69
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 389 FGTPEQLKYLVDECHKAGL 407
FGT + LVD H G+
Sbjct: 108 FGTLSDFQRLVDAAHAKGI 126
Score = 33.3 bits (76), Expect = 0.69
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 408 FGTPEQLKYLVDECHKAGL 426
FGT + LVD H G+
Sbjct: 108 FGTLSDFQRLVDAAHAKGI 126
Score = 33.3 bits (76), Expect = 0.69
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 427 FGTPEQLKYLVDECHKAGL 445
FGT + LVD H G+
Sbjct: 108 FGTLSDFQRLVDAAHAKGI 126
Score = 33.3 bits (76), Expect = 0.69
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 446 FGTPEQLKYLVDECHKAGL 464
FGT + LVD H G+
Sbjct: 108 FGTLSDFQRLVDAAHAKGI 126
Score = 33.3 bits (76), Expect = 0.69
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 465 FGTPEQLKYLVDECHKAGL 483
FGT + LVD H G+
Sbjct: 108 FGTLSDFQRLVDAAHAKGI 126
Score = 33.3 bits (76), Expect = 0.69
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 484 FGTPEQLKYLVDECHKAGL 502
FGT + LVD H G+
Sbjct: 108 FGTLSDFQRLVDAAHAKGI 126
Score = 33.3 bits (76), Expect = 0.69
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 503 FGTPEQLKYLVDECHKAGL 521
FGT + LVD H G+
Sbjct: 108 FGTLSDFQRLVDAAHAKGI 126
Score = 33.3 bits (76), Expect = 0.69
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 522 FGTPEQLKYLVDECHKAGL 540
FGT + LVD H G+
Sbjct: 108 FGTLSDFQRLVDAAHAKGI 126
Score = 33.3 bits (76), Expect = 0.69
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 541 FGTPEQLKYLVDECHKAGL 559
FGT + LVD H G+
Sbjct: 108 FGTLSDFQRLVDAAHAKGI 126
Score = 33.3 bits (76), Expect = 0.69
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 560 FGTPEQLKYLVDECHKAGL 578
FGT + LVD H G+
Sbjct: 108 FGTLSDFQRLVDAAHAKGI 126
Score = 33.3 bits (76), Expect = 0.69
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 579 FGTPEQLKYLVDECHKAGL 597
FGT + LVD H G+
Sbjct: 108 FGTLSDFQRLVDAAHAKGI 126
Score = 33.3 bits (76), Expect = 0.69
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 598 FGTPEQLKYLVDECHKAGL 616
FGT + LVD H G+
Sbjct: 108 FGTLSDFQRLVDAAHAKGI 126
Score = 33.3 bits (76), Expect = 0.69
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 617 FGTPEQLKYLVDECHKAGL 635
FGT + LVD H G+
Sbjct: 108 FGTLSDFQRLVDAAHAKGI 126
Score = 33.3 bits (76), Expect = 0.69
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 636 FGTPEQLKYLVDECHKAGL 654
FGT + LVD H G+
Sbjct: 108 FGTLSDFQRLVDAAHAKGI 126
Score = 33.3 bits (76), Expect = 0.69
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 655 FGTPEQLKYLVDECHKAGL 673
FGT + LVD H G+
Sbjct: 108 FGTLSDFQRLVDAAHAKGI 126
Score = 33.3 bits (76), Expect = 0.69
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 674 FGTPEQLKYLVDECHKAGL 692
FGT + LVD H G+
Sbjct: 108 FGTLSDFQRLVDAAHAKGI 126
Score = 33.3 bits (76), Expect = 0.69
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 693 FGTPEQLKYLVDECHKAGL 711
FGT + LVD H G+
Sbjct: 108 FGTLSDFQRLVDAAHAKGI 126
Score = 33.3 bits (76), Expect = 0.69
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 712 FGTPEQLKYLVDECHKAGL 730
FGT + LVD H G+
Sbjct: 108 FGTLSDFQRLVDAAHAKGI 126
Score = 33.3 bits (76), Expect = 0.69
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 731 FGTPEQLKYLVDECHKAGL 749
FGT + LVD H G+
Sbjct: 108 FGTLSDFQRLVDAAHAKGI 126
Score = 33.3 bits (76), Expect = 0.69
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 750 FGTPEQLKYLVDECHKAGL 768
FGT + LVD H G+
Sbjct: 108 FGTLSDFQRLVDAAHAKGI 126
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA;
1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB:
2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A
Length = 478
Score = 68.5 bits (168), Expect = 6e-12
Identities = 22/113 (19%), Positives = 40/113 (35%), Gaps = 18/113 (15%)
Query: 1033 FGTPEQLKYLVDECHKAGLYVLLDVVHSHASKN----VLDGLNEFDGTQACFFH------ 1082
+GT + LK L H+ G+Y+++DVV +H + +D + +FH
Sbjct: 94 YGTADDLKALSSALHERGMYLMVDVVANHMGYDGAGSSVDYSVFKPFSSQDYFHPFCFIQ 153
Query: 1083 ---DGPRGTHPLWDSRL-----FNYSEIEVLRFLLSNLRWYLDEYQFDGFRFD 1127
D + + ++ V + + Y DG R D
Sbjct: 154 NYEDQTQVEDCWLGDNTVSLPDLDTTKDVVKNEWYDWVGSLVSNYSIDGLRID 206
Score = 35.0 bits (81), Expect = 0.16
Identities = 12/51 (23%), Positives = 23/51 (45%), Gaps = 6/51 (11%)
Query: 769 FGTPEQLKYLVDECHKAGLLCFMHVVCAAGDFNNWNREEFAYKKLDFGKWE 819
+GT + LK L H+ G+ + VV N+ + A +D+ ++
Sbjct: 94 YGTADDLKALSSALHERGMYLMVDVV-----ANHMGY-DGAGSSVDYSVFK 138
Score = 32.7 bits (75), Expect = 0.87
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 123 FGTPEQLKYLVDECHKAGL 141
+GT + LK L H+ G+
Sbjct: 94 YGTADDLKALSSALHERGM 112
Score = 32.7 bits (75), Expect = 0.87
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 142 FGTPEQLKYLVDECHKAGL 160
+GT + LK L H+ G+
Sbjct: 94 YGTADDLKALSSALHERGM 112
Score = 32.7 bits (75), Expect = 0.87
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 161 FGTPEQLKYLVDECHKAGL 179
+GT + LK L H+ G+
Sbjct: 94 YGTADDLKALSSALHERGM 112
Score = 32.7 bits (75), Expect = 0.87
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 180 FGTPEQLKYLVDECHKAGL 198
+GT + LK L H+ G+
Sbjct: 94 YGTADDLKALSSALHERGM 112
Score = 32.7 bits (75), Expect = 0.87
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 199 FGTPEQLKYLVDECHKAGL 217
+GT + LK L H+ G+
Sbjct: 94 YGTADDLKALSSALHERGM 112
Score = 32.7 bits (75), Expect = 0.87
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 218 FGTPEQLKYLVDECHKAGL 236
+GT + LK L H+ G+
Sbjct: 94 YGTADDLKALSSALHERGM 112
Score = 32.7 bits (75), Expect = 0.87
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 237 FGTPEQLKYLVDECHKAGL 255
+GT + LK L H+ G+
Sbjct: 94 YGTADDLKALSSALHERGM 112
Score = 32.7 bits (75), Expect = 0.87
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 256 FGTPEQLKYLVDECHKAGL 274
+GT + LK L H+ G+
Sbjct: 94 YGTADDLKALSSALHERGM 112
Score = 32.7 bits (75), Expect = 0.87
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 275 FGTPEQLKYLVDECHKAGL 293
+GT + LK L H+ G+
Sbjct: 94 YGTADDLKALSSALHERGM 112
Score = 32.7 bits (75), Expect = 0.87
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 294 FGTPEQLKYLVDECHKAGL 312
+GT + LK L H+ G+
Sbjct: 94 YGTADDLKALSSALHERGM 112
Score = 32.7 bits (75), Expect = 0.87
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 313 FGTPEQLKYLVDECHKAGL 331
+GT + LK L H+ G+
Sbjct: 94 YGTADDLKALSSALHERGM 112
Score = 32.7 bits (75), Expect = 0.87
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 332 FGTPEQLKYLVDECHKAGL 350
+GT + LK L H+ G+
Sbjct: 94 YGTADDLKALSSALHERGM 112
Score = 32.7 bits (75), Expect = 0.87
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 351 FGTPEQLKYLVDECHKAGL 369
+GT + LK L H+ G+
Sbjct: 94 YGTADDLKALSSALHERGM 112
Score = 32.7 bits (75), Expect = 0.87
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 370 FGTPEQLKYLVDECHKAGL 388
+GT + LK L H+ G+
Sbjct: 94 YGTADDLKALSSALHERGM 112
Score = 32.7 bits (75), Expect = 0.87
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 389 FGTPEQLKYLVDECHKAGL 407
+GT + LK L H+ G+
Sbjct: 94 YGTADDLKALSSALHERGM 112
Score = 32.7 bits (75), Expect = 0.87
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 408 FGTPEQLKYLVDECHKAGL 426
+GT + LK L H+ G+
Sbjct: 94 YGTADDLKALSSALHERGM 112
Score = 32.7 bits (75), Expect = 0.87
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 427 FGTPEQLKYLVDECHKAGL 445
+GT + LK L H+ G+
Sbjct: 94 YGTADDLKALSSALHERGM 112
Score = 32.7 bits (75), Expect = 0.87
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 446 FGTPEQLKYLVDECHKAGL 464
+GT + LK L H+ G+
Sbjct: 94 YGTADDLKALSSALHERGM 112
Score = 32.7 bits (75), Expect = 0.87
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 465 FGTPEQLKYLVDECHKAGL 483
+GT + LK L H+ G+
Sbjct: 94 YGTADDLKALSSALHERGM 112
Score = 32.7 bits (75), Expect = 0.87
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 484 FGTPEQLKYLVDECHKAGL 502
+GT + LK L H+ G+
Sbjct: 94 YGTADDLKALSSALHERGM 112
Score = 32.7 bits (75), Expect = 0.87
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 503 FGTPEQLKYLVDECHKAGL 521
+GT + LK L H+ G+
Sbjct: 94 YGTADDLKALSSALHERGM 112
Score = 32.7 bits (75), Expect = 0.87
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 522 FGTPEQLKYLVDECHKAGL 540
+GT + LK L H+ G+
Sbjct: 94 YGTADDLKALSSALHERGM 112
Score = 32.7 bits (75), Expect = 0.87
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 541 FGTPEQLKYLVDECHKAGL 559
+GT + LK L H+ G+
Sbjct: 94 YGTADDLKALSSALHERGM 112
Score = 32.7 bits (75), Expect = 0.87
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 560 FGTPEQLKYLVDECHKAGL 578
+GT + LK L H+ G+
Sbjct: 94 YGTADDLKALSSALHERGM 112
Score = 32.7 bits (75), Expect = 0.87
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 579 FGTPEQLKYLVDECHKAGL 597
+GT + LK L H+ G+
Sbjct: 94 YGTADDLKALSSALHERGM 112
Score = 32.7 bits (75), Expect = 0.87
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 598 FGTPEQLKYLVDECHKAGL 616
+GT + LK L H+ G+
Sbjct: 94 YGTADDLKALSSALHERGM 112
Score = 32.7 bits (75), Expect = 0.87
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 617 FGTPEQLKYLVDECHKAGL 635
+GT + LK L H+ G+
Sbjct: 94 YGTADDLKALSSALHERGM 112
Score = 32.7 bits (75), Expect = 0.87
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 636 FGTPEQLKYLVDECHKAGL 654
+GT + LK L H+ G+
Sbjct: 94 YGTADDLKALSSALHERGM 112
Score = 32.7 bits (75), Expect = 0.87
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 655 FGTPEQLKYLVDECHKAGL 673
+GT + LK L H+ G+
Sbjct: 94 YGTADDLKALSSALHERGM 112
Score = 32.7 bits (75), Expect = 0.87
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 674 FGTPEQLKYLVDECHKAGL 692
+GT + LK L H+ G+
Sbjct: 94 YGTADDLKALSSALHERGM 112
Score = 32.7 bits (75), Expect = 0.87
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 693 FGTPEQLKYLVDECHKAGL 711
+GT + LK L H+ G+
Sbjct: 94 YGTADDLKALSSALHERGM 112
Score = 32.7 bits (75), Expect = 0.87
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 712 FGTPEQLKYLVDECHKAGL 730
+GT + LK L H+ G+
Sbjct: 94 YGTADDLKALSSALHERGM 112
Score = 32.7 bits (75), Expect = 0.87
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 731 FGTPEQLKYLVDECHKAGL 749
+GT + LK L H+ G+
Sbjct: 94 YGTADDLKALSSALHERGM 112
Score = 32.7 bits (75), Expect = 0.87
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 750 FGTPEQLKYLVDECHKAGL 768
+GT + LK L H+ G+
Sbjct: 94 YGTADDLKALSSALHERGM 112
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase;
1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB:
1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A
3bsh_A* 1ava_A 1amy_A 1bg9_A*
Length = 405
Score = 67.8 bits (166), Expect = 8e-12
Identities = 24/129 (18%), Positives = 42/129 (32%), Gaps = 25/129 (19%)
Query: 1022 YLVDECHKAGLFGTPEQLKYLVDECHKAGLYVLLDVVHSHAS---KNVLDGLNEFDGTQA 1078
Y +D +G +LK L+ H G+ + D+V +H K+ F+G +
Sbjct: 58 YDIDASK----YGNAAELKSLIGALHGKGVQAIADIVINHRCADYKDSRGIYCIFEGGTS 113
Query: 1079 ---------CFFHDGPRGTHPLWDSRLF---------NYSEIEVLRFLLSNLRWYLDEYQ 1120
D + + + ++ V R L L W +
Sbjct: 114 DGRLDWGPHMICRDDTKYSDGTANLDTGADFAAAPDIDHLNDRVQRELKEWLLWLKSDLG 173
Query: 1121 FDGFRFDGV 1129
FD +R D
Sbjct: 174 FDAWRLDFA 182
Score = 35.1 bits (81), Expect = 0.15
Identities = 9/67 (13%), Positives = 19/67 (28%), Gaps = 14/67 (20%)
Query: 758 YLVDECHKAGLFGTPEQLKYLVDECHKAGLLCFMHVVC------AAGDFNNWNREEFAYK 811
Y +D +G +LK L+ H G + + D+ + ++
Sbjct: 58 YDIDASK----YGNAAELKSLIGALHGKG----VQAIADIVINHRCADYKDSRGIYCIFE 109
Query: 812 KLDFGKW 818
Sbjct: 110 GGTSDGR 116
Score = 33.6 bits (77), Expect = 0.50
Identities = 8/30 (26%), Positives = 13/30 (43%), Gaps = 4/30 (13%)
Query: 131 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 160
Y +D +G +LK L+ H G+
Sbjct: 58 YDIDASK----YGNAAELKSLIGALHGKGV 83
Score = 33.6 bits (77), Expect = 0.50
Identities = 8/30 (26%), Positives = 13/30 (43%), Gaps = 4/30 (13%)
Query: 150 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 179
Y +D +G +LK L+ H G+
Sbjct: 58 YDIDASK----YGNAAELKSLIGALHGKGV 83
Score = 33.6 bits (77), Expect = 0.50
Identities = 8/30 (26%), Positives = 13/30 (43%), Gaps = 4/30 (13%)
Query: 169 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 198
Y +D +G +LK L+ H G+
Sbjct: 58 YDIDASK----YGNAAELKSLIGALHGKGV 83
Score = 33.6 bits (77), Expect = 0.50
Identities = 8/30 (26%), Positives = 13/30 (43%), Gaps = 4/30 (13%)
Query: 188 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 217
Y +D +G +LK L+ H G+
Sbjct: 58 YDIDASK----YGNAAELKSLIGALHGKGV 83
Score = 33.6 bits (77), Expect = 0.50
Identities = 8/30 (26%), Positives = 13/30 (43%), Gaps = 4/30 (13%)
Query: 207 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 236
Y +D +G +LK L+ H G+
Sbjct: 58 YDIDASK----YGNAAELKSLIGALHGKGV 83
Score = 33.6 bits (77), Expect = 0.50
Identities = 8/30 (26%), Positives = 13/30 (43%), Gaps = 4/30 (13%)
Query: 226 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 255
Y +D +G +LK L+ H G+
Sbjct: 58 YDIDASK----YGNAAELKSLIGALHGKGV 83
Score = 33.6 bits (77), Expect = 0.50
Identities = 8/30 (26%), Positives = 13/30 (43%), Gaps = 4/30 (13%)
Query: 245 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 274
Y +D +G +LK L+ H G+
Sbjct: 58 YDIDASK----YGNAAELKSLIGALHGKGV 83
Score = 33.6 bits (77), Expect = 0.50
Identities = 8/30 (26%), Positives = 13/30 (43%), Gaps = 4/30 (13%)
Query: 264 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 293
Y +D +G +LK L+ H G+
Sbjct: 58 YDIDASK----YGNAAELKSLIGALHGKGV 83
Score = 33.6 bits (77), Expect = 0.50
Identities = 8/30 (26%), Positives = 13/30 (43%), Gaps = 4/30 (13%)
Query: 283 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 312
Y +D +G +LK L+ H G+
Sbjct: 58 YDIDASK----YGNAAELKSLIGALHGKGV 83
Score = 33.6 bits (77), Expect = 0.50
Identities = 8/30 (26%), Positives = 13/30 (43%), Gaps = 4/30 (13%)
Query: 302 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 331
Y +D +G +LK L+ H G+
Sbjct: 58 YDIDASK----YGNAAELKSLIGALHGKGV 83
Score = 33.6 bits (77), Expect = 0.50
Identities = 8/30 (26%), Positives = 13/30 (43%), Gaps = 4/30 (13%)
Query: 321 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 350
Y +D +G +LK L+ H G+
Sbjct: 58 YDIDASK----YGNAAELKSLIGALHGKGV 83
Score = 33.6 bits (77), Expect = 0.50
Identities = 8/30 (26%), Positives = 13/30 (43%), Gaps = 4/30 (13%)
Query: 340 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 369
Y +D +G +LK L+ H G+
Sbjct: 58 YDIDASK----YGNAAELKSLIGALHGKGV 83
Score = 33.6 bits (77), Expect = 0.50
Identities = 8/30 (26%), Positives = 13/30 (43%), Gaps = 4/30 (13%)
Query: 359 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 388
Y +D +G +LK L+ H G+
Sbjct: 58 YDIDASK----YGNAAELKSLIGALHGKGV 83
Score = 33.6 bits (77), Expect = 0.50
Identities = 8/30 (26%), Positives = 13/30 (43%), Gaps = 4/30 (13%)
Query: 378 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 407
Y +D +G +LK L+ H G+
Sbjct: 58 YDIDASK----YGNAAELKSLIGALHGKGV 83
Score = 33.6 bits (77), Expect = 0.50
Identities = 8/30 (26%), Positives = 13/30 (43%), Gaps = 4/30 (13%)
Query: 397 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 426
Y +D +G +LK L+ H G+
Sbjct: 58 YDIDASK----YGNAAELKSLIGALHGKGV 83
Score = 33.6 bits (77), Expect = 0.50
Identities = 8/30 (26%), Positives = 13/30 (43%), Gaps = 4/30 (13%)
Query: 416 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 445
Y +D +G +LK L+ H G+
Sbjct: 58 YDIDASK----YGNAAELKSLIGALHGKGV 83
Score = 33.6 bits (77), Expect = 0.50
Identities = 8/30 (26%), Positives = 13/30 (43%), Gaps = 4/30 (13%)
Query: 435 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 464
Y +D +G +LK L+ H G+
Sbjct: 58 YDIDASK----YGNAAELKSLIGALHGKGV 83
Score = 33.6 bits (77), Expect = 0.50
Identities = 8/30 (26%), Positives = 13/30 (43%), Gaps = 4/30 (13%)
Query: 454 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 483
Y +D +G +LK L+ H G+
Sbjct: 58 YDIDASK----YGNAAELKSLIGALHGKGV 83
Score = 33.6 bits (77), Expect = 0.50
Identities = 8/30 (26%), Positives = 13/30 (43%), Gaps = 4/30 (13%)
Query: 473 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 502
Y +D +G +LK L+ H G+
Sbjct: 58 YDIDASK----YGNAAELKSLIGALHGKGV 83
Score = 33.6 bits (77), Expect = 0.50
Identities = 8/30 (26%), Positives = 13/30 (43%), Gaps = 4/30 (13%)
Query: 492 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 521
Y +D +G +LK L+ H G+
Sbjct: 58 YDIDASK----YGNAAELKSLIGALHGKGV 83
Score = 33.6 bits (77), Expect = 0.50
Identities = 8/30 (26%), Positives = 13/30 (43%), Gaps = 4/30 (13%)
Query: 511 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 540
Y +D +G +LK L+ H G+
Sbjct: 58 YDIDASK----YGNAAELKSLIGALHGKGV 83
Score = 33.6 bits (77), Expect = 0.50
Identities = 8/30 (26%), Positives = 13/30 (43%), Gaps = 4/30 (13%)
Query: 530 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 559
Y +D +G +LK L+ H G+
Sbjct: 58 YDIDASK----YGNAAELKSLIGALHGKGV 83
Score = 33.6 bits (77), Expect = 0.50
Identities = 8/30 (26%), Positives = 13/30 (43%), Gaps = 4/30 (13%)
Query: 549 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 578
Y +D +G +LK L+ H G+
Sbjct: 58 YDIDASK----YGNAAELKSLIGALHGKGV 83
Score = 33.6 bits (77), Expect = 0.50
Identities = 8/30 (26%), Positives = 13/30 (43%), Gaps = 4/30 (13%)
Query: 568 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 597
Y +D +G +LK L+ H G+
Sbjct: 58 YDIDASK----YGNAAELKSLIGALHGKGV 83
Score = 33.6 bits (77), Expect = 0.50
Identities = 8/30 (26%), Positives = 13/30 (43%), Gaps = 4/30 (13%)
Query: 587 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 616
Y +D +G +LK L+ H G+
Sbjct: 58 YDIDASK----YGNAAELKSLIGALHGKGV 83
Score = 33.6 bits (77), Expect = 0.50
Identities = 8/30 (26%), Positives = 13/30 (43%), Gaps = 4/30 (13%)
Query: 606 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 635
Y +D +G +LK L+ H G+
Sbjct: 58 YDIDASK----YGNAAELKSLIGALHGKGV 83
Score = 33.6 bits (77), Expect = 0.50
Identities = 8/30 (26%), Positives = 13/30 (43%), Gaps = 4/30 (13%)
Query: 625 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 654
Y +D +G +LK L+ H G+
Sbjct: 58 YDIDASK----YGNAAELKSLIGALHGKGV 83
Score = 33.6 bits (77), Expect = 0.50
Identities = 8/30 (26%), Positives = 13/30 (43%), Gaps = 4/30 (13%)
Query: 644 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 673
Y +D +G +LK L+ H G+
Sbjct: 58 YDIDASK----YGNAAELKSLIGALHGKGV 83
Score = 33.6 bits (77), Expect = 0.50
Identities = 8/30 (26%), Positives = 13/30 (43%), Gaps = 4/30 (13%)
Query: 663 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 692
Y +D +G +LK L+ H G+
Sbjct: 58 YDIDASK----YGNAAELKSLIGALHGKGV 83
Score = 33.6 bits (77), Expect = 0.50
Identities = 8/30 (26%), Positives = 13/30 (43%), Gaps = 4/30 (13%)
Query: 682 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 711
Y +D +G +LK L+ H G+
Sbjct: 58 YDIDASK----YGNAAELKSLIGALHGKGV 83
Score = 33.6 bits (77), Expect = 0.50
Identities = 8/30 (26%), Positives = 13/30 (43%), Gaps = 4/30 (13%)
Query: 701 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 730
Y +D +G +LK L+ H G+
Sbjct: 58 YDIDASK----YGNAAELKSLIGALHGKGV 83
Score = 33.6 bits (77), Expect = 0.50
Identities = 8/30 (26%), Positives = 13/30 (43%), Gaps = 4/30 (13%)
Query: 720 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 749
Y +D +G +LK L+ H G+
Sbjct: 58 YDIDASK----YGNAAELKSLIGALHGKGV 83
Score = 33.6 bits (77), Expect = 0.50
Identities = 8/30 (26%), Positives = 13/30 (43%), Gaps = 4/30 (13%)
Query: 739 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 768
Y +D +G +LK L+ H G+
Sbjct: 58 YDIDASK----YGNAAELKSLIGALHGKGV 83
Score = 31.6 bits (72), Expect = 1.6
Identities = 6/19 (31%), Positives = 10/19 (52%)
Query: 123 FGTPEQLKYLVDECHKAGL 141
+G +LK L+ H G+
Sbjct: 65 YGNAAELKSLIGALHGKGV 83
>3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable,
family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium
thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1
b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A*
1cgt_A
Length = 683
Score = 68.3 bits (167), Expect = 1e-11
Identities = 19/119 (15%), Positives = 39/119 (32%), Gaps = 25/119 (21%)
Query: 1033 FGTPEQLKYLVDECHKAGLYVLLDVVHSHASKNVL---------------DGLNEFDGTQ 1077
FG+ + L++ H + V++D +H S L +
Sbjct: 113 FGSFTDFQNLINTAHAHNIKVIIDFAPNHTSPASETDPTYAENGRLYDNGTLLGGYTNDT 172
Query: 1078 ACFFHDGPRGTHPLWDSRLF---------NYSEIEVLRFLLSNLRWYLDEYQFDGFRFD 1127
+FH ++ ++ N + +L S ++ +L + DG R D
Sbjct: 173 NGYFHHYGGTDFSSYEDGIYRNLFDLADLNQQNSTIDSYLKSAIKVWL-DMGIDGIRLD 230
Score = 34.1 bits (78), Expect = 0.34
Identities = 5/26 (19%), Positives = 11/26 (42%), Gaps = 4/26 (15%)
Query: 769 FGTPEQLKYLVDECHKAGLLCFMHVV 794
FG+ + L++ H + V+
Sbjct: 113 FGSFTDFQNLINTAHAHN----IKVI 134
Score = 32.9 bits (75), Expect = 0.92
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 123 FGTPEQLKYLVDECHKAGL 141
FG+ + L++ H +
Sbjct: 113 FGSFTDFQNLINTAHAHNI 131
Score = 32.9 bits (75), Expect = 0.92
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 142 FGTPEQLKYLVDECHKAGL 160
FG+ + L++ H +
Sbjct: 113 FGSFTDFQNLINTAHAHNI 131
Score = 32.9 bits (75), Expect = 0.92
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 161 FGTPEQLKYLVDECHKAGL 179
FG+ + L++ H +
Sbjct: 113 FGSFTDFQNLINTAHAHNI 131
Score = 32.9 bits (75), Expect = 0.92
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 180 FGTPEQLKYLVDECHKAGL 198
FG+ + L++ H +
Sbjct: 113 FGSFTDFQNLINTAHAHNI 131
Score = 32.9 bits (75), Expect = 0.92
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 199 FGTPEQLKYLVDECHKAGL 217
FG+ + L++ H +
Sbjct: 113 FGSFTDFQNLINTAHAHNI 131
Score = 32.9 bits (75), Expect = 0.92
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 218 FGTPEQLKYLVDECHKAGL 236
FG+ + L++ H +
Sbjct: 113 FGSFTDFQNLINTAHAHNI 131
Score = 32.9 bits (75), Expect = 0.92
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 237 FGTPEQLKYLVDECHKAGL 255
FG+ + L++ H +
Sbjct: 113 FGSFTDFQNLINTAHAHNI 131
Score = 32.9 bits (75), Expect = 0.92
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 256 FGTPEQLKYLVDECHKAGL 274
FG+ + L++ H +
Sbjct: 113 FGSFTDFQNLINTAHAHNI 131
Score = 32.9 bits (75), Expect = 0.92
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 275 FGTPEQLKYLVDECHKAGL 293
FG+ + L++ H +
Sbjct: 113 FGSFTDFQNLINTAHAHNI 131
Score = 32.9 bits (75), Expect = 0.92
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 294 FGTPEQLKYLVDECHKAGL 312
FG+ + L++ H +
Sbjct: 113 FGSFTDFQNLINTAHAHNI 131
Score = 32.9 bits (75), Expect = 0.92
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 313 FGTPEQLKYLVDECHKAGL 331
FG+ + L++ H +
Sbjct: 113 FGSFTDFQNLINTAHAHNI 131
Score = 32.9 bits (75), Expect = 0.92
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 332 FGTPEQLKYLVDECHKAGL 350
FG+ + L++ H +
Sbjct: 113 FGSFTDFQNLINTAHAHNI 131
Score = 32.9 bits (75), Expect = 0.92
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 351 FGTPEQLKYLVDECHKAGL 369
FG+ + L++ H +
Sbjct: 113 FGSFTDFQNLINTAHAHNI 131
Score = 32.9 bits (75), Expect = 0.92
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 370 FGTPEQLKYLVDECHKAGL 388
FG+ + L++ H +
Sbjct: 113 FGSFTDFQNLINTAHAHNI 131
Score = 32.9 bits (75), Expect = 0.92
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 389 FGTPEQLKYLVDECHKAGL 407
FG+ + L++ H +
Sbjct: 113 FGSFTDFQNLINTAHAHNI 131
Score = 32.9 bits (75), Expect = 0.92
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 408 FGTPEQLKYLVDECHKAGL 426
FG+ + L++ H +
Sbjct: 113 FGSFTDFQNLINTAHAHNI 131
Score = 32.9 bits (75), Expect = 0.92
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 427 FGTPEQLKYLVDECHKAGL 445
FG+ + L++ H +
Sbjct: 113 FGSFTDFQNLINTAHAHNI 131
Score = 32.9 bits (75), Expect = 0.92
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 446 FGTPEQLKYLVDECHKAGL 464
FG+ + L++ H +
Sbjct: 113 FGSFTDFQNLINTAHAHNI 131
Score = 32.9 bits (75), Expect = 0.92
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 465 FGTPEQLKYLVDECHKAGL 483
FG+ + L++ H +
Sbjct: 113 FGSFTDFQNLINTAHAHNI 131
Score = 32.9 bits (75), Expect = 0.92
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 484 FGTPEQLKYLVDECHKAGL 502
FG+ + L++ H +
Sbjct: 113 FGSFTDFQNLINTAHAHNI 131
Score = 32.9 bits (75), Expect = 0.92
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 503 FGTPEQLKYLVDECHKAGL 521
FG+ + L++ H +
Sbjct: 113 FGSFTDFQNLINTAHAHNI 131
Score = 32.9 bits (75), Expect = 0.92
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 522 FGTPEQLKYLVDECHKAGL 540
FG+ + L++ H +
Sbjct: 113 FGSFTDFQNLINTAHAHNI 131
Score = 32.9 bits (75), Expect = 0.92
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 541 FGTPEQLKYLVDECHKAGL 559
FG+ + L++ H +
Sbjct: 113 FGSFTDFQNLINTAHAHNI 131
Score = 32.9 bits (75), Expect = 0.92
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 560 FGTPEQLKYLVDECHKAGL 578
FG+ + L++ H +
Sbjct: 113 FGSFTDFQNLINTAHAHNI 131
Score = 32.9 bits (75), Expect = 0.92
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 579 FGTPEQLKYLVDECHKAGL 597
FG+ + L++ H +
Sbjct: 113 FGSFTDFQNLINTAHAHNI 131
Score = 32.9 bits (75), Expect = 0.92
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 598 FGTPEQLKYLVDECHKAGL 616
FG+ + L++ H +
Sbjct: 113 FGSFTDFQNLINTAHAHNI 131
Score = 32.9 bits (75), Expect = 0.92
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 617 FGTPEQLKYLVDECHKAGL 635
FG+ + L++ H +
Sbjct: 113 FGSFTDFQNLINTAHAHNI 131
Score = 32.9 bits (75), Expect = 0.92
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 636 FGTPEQLKYLVDECHKAGL 654
FG+ + L++ H +
Sbjct: 113 FGSFTDFQNLINTAHAHNI 131
Score = 32.9 bits (75), Expect = 0.92
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 655 FGTPEQLKYLVDECHKAGL 673
FG+ + L++ H +
Sbjct: 113 FGSFTDFQNLINTAHAHNI 131
Score = 32.9 bits (75), Expect = 0.92
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 674 FGTPEQLKYLVDECHKAGL 692
FG+ + L++ H +
Sbjct: 113 FGSFTDFQNLINTAHAHNI 131
Score = 32.9 bits (75), Expect = 0.92
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 693 FGTPEQLKYLVDECHKAGL 711
FG+ + L++ H +
Sbjct: 113 FGSFTDFQNLINTAHAHNI 131
Score = 32.9 bits (75), Expect = 0.92
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 712 FGTPEQLKYLVDECHKAGL 730
FG+ + L++ H +
Sbjct: 113 FGSFTDFQNLINTAHAHNI 131
Score = 32.9 bits (75), Expect = 0.92
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 731 FGTPEQLKYLVDECHKAGL 749
FG+ + L++ H +
Sbjct: 113 FGSFTDFQNLINTAHAHNI 131
Score = 32.9 bits (75), Expect = 0.92
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 750 FGTPEQLKYLVDECHKAGL 768
FG+ + L++ H +
Sbjct: 113 FGSFTDFQNLINTAHAHNI 131
>2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1
c.1.8.1
Length = 484
Score = 67.5 bits (165), Expect = 1e-11
Identities = 27/115 (23%), Positives = 40/115 (34%), Gaps = 22/115 (19%)
Query: 1033 FGTPEQLKYLVDECHKAGLYVLLDVVHSHASKN----VLDGLNEFDGTQACFFHDGPRGT 1088
FGT + LK L D H G+Y+++DVV H +D + +FH P
Sbjct: 94 FGTADNLKSLSDALHARGMYLMVDVVPDHMGYAGNGNDVDYSVFDPFDSSSYFH--PYCL 151
Query: 1089 HPLWDSRL----------------FNYSEIEVLRFLLSNLRWYLDEYQFDGFRFD 1127
WD+ + +E V + + Y DG R D
Sbjct: 152 ITDWDNLTMVEDCWEGDTIVSLPDLDTTETAVRTIWYDWVADLVSNYSVDGLRID 206
Score = 34.3 bits (79), Expect = 0.30
Identities = 14/45 (31%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Query: 769 FGTPEQLKYLVDECHKAGLLCFMHVVC-AAGDFNNWNREEFAYKK 812
FGT + LK L D H G+ + VV G N N +++
Sbjct: 94 FGTADNLKSLSDALHARGMYLMVDVVPDHMGYAGNGNDVDYSVFD 138
Score = 30.5 bits (69), Expect = 3.9
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 123 FGTPEQLKYLVDECHKAGL 141
FGT + LK L D H G+
Sbjct: 94 FGTADNLKSLSDALHARGM 112
Score = 30.5 bits (69), Expect = 3.9
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 142 FGTPEQLKYLVDECHKAGL 160
FGT + LK L D H G+
Sbjct: 94 FGTADNLKSLSDALHARGM 112
Score = 30.5 bits (69), Expect = 3.9
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 161 FGTPEQLKYLVDECHKAGL 179
FGT + LK L D H G+
Sbjct: 94 FGTADNLKSLSDALHARGM 112
Score = 30.5 bits (69), Expect = 3.9
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 180 FGTPEQLKYLVDECHKAGL 198
FGT + LK L D H G+
Sbjct: 94 FGTADNLKSLSDALHARGM 112
Score = 30.5 bits (69), Expect = 3.9
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 199 FGTPEQLKYLVDECHKAGL 217
FGT + LK L D H G+
Sbjct: 94 FGTADNLKSLSDALHARGM 112
Score = 30.5 bits (69), Expect = 3.9
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 218 FGTPEQLKYLVDECHKAGL 236
FGT + LK L D H G+
Sbjct: 94 FGTADNLKSLSDALHARGM 112
Score = 30.5 bits (69), Expect = 3.9
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 237 FGTPEQLKYLVDECHKAGL 255
FGT + LK L D H G+
Sbjct: 94 FGTADNLKSLSDALHARGM 112
Score = 30.5 bits (69), Expect = 3.9
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 256 FGTPEQLKYLVDECHKAGL 274
FGT + LK L D H G+
Sbjct: 94 FGTADNLKSLSDALHARGM 112
Score = 30.5 bits (69), Expect = 3.9
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 275 FGTPEQLKYLVDECHKAGL 293
FGT + LK L D H G+
Sbjct: 94 FGTADNLKSLSDALHARGM 112
Score = 30.5 bits (69), Expect = 3.9
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 294 FGTPEQLKYLVDECHKAGL 312
FGT + LK L D H G+
Sbjct: 94 FGTADNLKSLSDALHARGM 112
Score = 30.5 bits (69), Expect = 3.9
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 313 FGTPEQLKYLVDECHKAGL 331
FGT + LK L D H G+
Sbjct: 94 FGTADNLKSLSDALHARGM 112
Score = 30.5 bits (69), Expect = 3.9
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 332 FGTPEQLKYLVDECHKAGL 350
FGT + LK L D H G+
Sbjct: 94 FGTADNLKSLSDALHARGM 112
Score = 30.5 bits (69), Expect = 3.9
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 351 FGTPEQLKYLVDECHKAGL 369
FGT + LK L D H G+
Sbjct: 94 FGTADNLKSLSDALHARGM 112
Score = 30.5 bits (69), Expect = 3.9
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 370 FGTPEQLKYLVDECHKAGL 388
FGT + LK L D H G+
Sbjct: 94 FGTADNLKSLSDALHARGM 112
Score = 30.5 bits (69), Expect = 3.9
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 389 FGTPEQLKYLVDECHKAGL 407
FGT + LK L D H G+
Sbjct: 94 FGTADNLKSLSDALHARGM 112
Score = 30.5 bits (69), Expect = 3.9
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 408 FGTPEQLKYLVDECHKAGL 426
FGT + LK L D H G+
Sbjct: 94 FGTADNLKSLSDALHARGM 112
Score = 30.5 bits (69), Expect = 3.9
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 427 FGTPEQLKYLVDECHKAGL 445
FGT + LK L D H G+
Sbjct: 94 FGTADNLKSLSDALHARGM 112
Score = 30.5 bits (69), Expect = 3.9
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 446 FGTPEQLKYLVDECHKAGL 464
FGT + LK L D H G+
Sbjct: 94 FGTADNLKSLSDALHARGM 112
Score = 30.5 bits (69), Expect = 3.9
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 465 FGTPEQLKYLVDECHKAGL 483
FGT + LK L D H G+
Sbjct: 94 FGTADNLKSLSDALHARGM 112
Score = 30.5 bits (69), Expect = 3.9
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 484 FGTPEQLKYLVDECHKAGL 502
FGT + LK L D H G+
Sbjct: 94 FGTADNLKSLSDALHARGM 112
Score = 30.5 bits (69), Expect = 3.9
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 503 FGTPEQLKYLVDECHKAGL 521
FGT + LK L D H G+
Sbjct: 94 FGTADNLKSLSDALHARGM 112
Score = 30.5 bits (69), Expect = 3.9
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 522 FGTPEQLKYLVDECHKAGL 540
FGT + LK L D H G+
Sbjct: 94 FGTADNLKSLSDALHARGM 112
Score = 30.5 bits (69), Expect = 3.9
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 541 FGTPEQLKYLVDECHKAGL 559
FGT + LK L D H G+
Sbjct: 94 FGTADNLKSLSDALHARGM 112
Score = 30.5 bits (69), Expect = 3.9
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 560 FGTPEQLKYLVDECHKAGL 578
FGT + LK L D H G+
Sbjct: 94 FGTADNLKSLSDALHARGM 112
Score = 30.5 bits (69), Expect = 3.9
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 579 FGTPEQLKYLVDECHKAGL 597
FGT + LK L D H G+
Sbjct: 94 FGTADNLKSLSDALHARGM 112
Score = 30.5 bits (69), Expect = 3.9
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 598 FGTPEQLKYLVDECHKAGL 616
FGT + LK L D H G+
Sbjct: 94 FGTADNLKSLSDALHARGM 112
Score = 30.5 bits (69), Expect = 3.9
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 617 FGTPEQLKYLVDECHKAGL 635
FGT + LK L D H G+
Sbjct: 94 FGTADNLKSLSDALHARGM 112
Score = 30.5 bits (69), Expect = 3.9
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 636 FGTPEQLKYLVDECHKAGL 654
FGT + LK L D H G+
Sbjct: 94 FGTADNLKSLSDALHARGM 112
Score = 30.5 bits (69), Expect = 3.9
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 655 FGTPEQLKYLVDECHKAGL 673
FGT + LK L D H G+
Sbjct: 94 FGTADNLKSLSDALHARGM 112
Score = 30.5 bits (69), Expect = 3.9
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 674 FGTPEQLKYLVDECHKAGL 692
FGT + LK L D H G+
Sbjct: 94 FGTADNLKSLSDALHARGM 112
Score = 30.5 bits (69), Expect = 3.9
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 693 FGTPEQLKYLVDECHKAGL 711
FGT + LK L D H G+
Sbjct: 94 FGTADNLKSLSDALHARGM 112
Score = 30.5 bits (69), Expect = 3.9
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 712 FGTPEQLKYLVDECHKAGL 730
FGT + LK L D H G+
Sbjct: 94 FGTADNLKSLSDALHARGM 112
Score = 30.5 bits (69), Expect = 3.9
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 731 FGTPEQLKYLVDECHKAGL 749
FGT + LK L D H G+
Sbjct: 94 FGTADNLKSLSDALHARGM 112
Score = 30.5 bits (69), Expect = 3.9
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 750 FGTPEQLKYLVDECHKAGL 768
FGT + LK L D H G+
Sbjct: 94 FGTADNLKSLSDALHARGM 112
>1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex,
oligosaccharide, family 13 glycosyl hydrolase,
transglycosylation; HET: GLC; 1.78A {Bacillus circulans}
SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A*
1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A*
2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A
1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ...
Length = 686
Score = 67.2 bits (164), Expect = 2e-11
Identities = 19/119 (15%), Positives = 39/119 (32%), Gaps = 25/119 (21%)
Query: 1033 FGTPEQLKYLVDECHKAGLYVLLDVVHSHASKNVLD---------------GLNEFDGTQ 1077
+GT + L+ H + V++D +H S D L +
Sbjct: 112 YGTIADFQNLIAAAHAKNIKVIIDFAPNHTSPASSDQPSFAENGRLYDNGTLLGGYTNDT 171
Query: 1078 ACFFHDGPRGTHPLWDSRLF---------NYSEIEVLRFLLSNLRWYLDEYQFDGFRFD 1127
FH ++ ++ N++ V +L ++ +L + DG R +
Sbjct: 172 QNLFHHNGGTDFSTTENGIYKNLYDLADLNHNNSTVDVYLKDAIKMWL-DLGIDGIRMN 229
Score = 34.4 bits (79), Expect = 0.26
Identities = 5/26 (19%), Positives = 10/26 (38%), Gaps = 4/26 (15%)
Query: 769 FGTPEQLKYLVDECHKAGLLCFMHVV 794
+GT + L+ H + V+
Sbjct: 112 YGTIADFQNLIAAAHAKN----IKVI 133
Score = 32.9 bits (75), Expect = 0.72
Identities = 4/19 (21%), Positives = 8/19 (42%)
Query: 123 FGTPEQLKYLVDECHKAGL 141
+GT + L+ H +
Sbjct: 112 YGTIADFQNLIAAAHAKNI 130
Score = 32.9 bits (75), Expect = 0.72
Identities = 4/19 (21%), Positives = 8/19 (42%)
Query: 142 FGTPEQLKYLVDECHKAGL 160
+GT + L+ H +
Sbjct: 112 YGTIADFQNLIAAAHAKNI 130
Score = 32.9 bits (75), Expect = 0.72
Identities = 4/19 (21%), Positives = 8/19 (42%)
Query: 161 FGTPEQLKYLVDECHKAGL 179
+GT + L+ H +
Sbjct: 112 YGTIADFQNLIAAAHAKNI 130
Score = 32.9 bits (75), Expect = 0.72
Identities = 4/19 (21%), Positives = 8/19 (42%)
Query: 180 FGTPEQLKYLVDECHKAGL 198
+GT + L+ H +
Sbjct: 112 YGTIADFQNLIAAAHAKNI 130
Score = 32.9 bits (75), Expect = 0.72
Identities = 4/19 (21%), Positives = 8/19 (42%)
Query: 199 FGTPEQLKYLVDECHKAGL 217
+GT + L+ H +
Sbjct: 112 YGTIADFQNLIAAAHAKNI 130
Score = 32.9 bits (75), Expect = 0.72
Identities = 4/19 (21%), Positives = 8/19 (42%)
Query: 218 FGTPEQLKYLVDECHKAGL 236
+GT + L+ H +
Sbjct: 112 YGTIADFQNLIAAAHAKNI 130
Score = 32.9 bits (75), Expect = 0.72
Identities = 4/19 (21%), Positives = 8/19 (42%)
Query: 237 FGTPEQLKYLVDECHKAGL 255
+GT + L+ H +
Sbjct: 112 YGTIADFQNLIAAAHAKNI 130
Score = 32.9 bits (75), Expect = 0.72
Identities = 4/19 (21%), Positives = 8/19 (42%)
Query: 256 FGTPEQLKYLVDECHKAGL 274
+GT + L+ H +
Sbjct: 112 YGTIADFQNLIAAAHAKNI 130
Score = 32.9 bits (75), Expect = 0.72
Identities = 4/19 (21%), Positives = 8/19 (42%)
Query: 275 FGTPEQLKYLVDECHKAGL 293
+GT + L+ H +
Sbjct: 112 YGTIADFQNLIAAAHAKNI 130
Score = 32.9 bits (75), Expect = 0.72
Identities = 4/19 (21%), Positives = 8/19 (42%)
Query: 294 FGTPEQLKYLVDECHKAGL 312
+GT + L+ H +
Sbjct: 112 YGTIADFQNLIAAAHAKNI 130
Score = 32.9 bits (75), Expect = 0.72
Identities = 4/19 (21%), Positives = 8/19 (42%)
Query: 313 FGTPEQLKYLVDECHKAGL 331
+GT + L+ H +
Sbjct: 112 YGTIADFQNLIAAAHAKNI 130
Score = 32.9 bits (75), Expect = 0.72
Identities = 4/19 (21%), Positives = 8/19 (42%)
Query: 332 FGTPEQLKYLVDECHKAGL 350
+GT + L+ H +
Sbjct: 112 YGTIADFQNLIAAAHAKNI 130
Score = 32.9 bits (75), Expect = 0.72
Identities = 4/19 (21%), Positives = 8/19 (42%)
Query: 351 FGTPEQLKYLVDECHKAGL 369
+GT + L+ H +
Sbjct: 112 YGTIADFQNLIAAAHAKNI 130
Score = 32.9 bits (75), Expect = 0.72
Identities = 4/19 (21%), Positives = 8/19 (42%)
Query: 370 FGTPEQLKYLVDECHKAGL 388
+GT + L+ H +
Sbjct: 112 YGTIADFQNLIAAAHAKNI 130
Score = 32.9 bits (75), Expect = 0.72
Identities = 4/19 (21%), Positives = 8/19 (42%)
Query: 389 FGTPEQLKYLVDECHKAGL 407
+GT + L+ H +
Sbjct: 112 YGTIADFQNLIAAAHAKNI 130
Score = 32.9 bits (75), Expect = 0.72
Identities = 4/19 (21%), Positives = 8/19 (42%)
Query: 408 FGTPEQLKYLVDECHKAGL 426
+GT + L+ H +
Sbjct: 112 YGTIADFQNLIAAAHAKNI 130
Score = 32.9 bits (75), Expect = 0.72
Identities = 4/19 (21%), Positives = 8/19 (42%)
Query: 427 FGTPEQLKYLVDECHKAGL 445
+GT + L+ H +
Sbjct: 112 YGTIADFQNLIAAAHAKNI 130
Score = 32.9 bits (75), Expect = 0.72
Identities = 4/19 (21%), Positives = 8/19 (42%)
Query: 446 FGTPEQLKYLVDECHKAGL 464
+GT + L+ H +
Sbjct: 112 YGTIADFQNLIAAAHAKNI 130
Score = 32.9 bits (75), Expect = 0.72
Identities = 4/19 (21%), Positives = 8/19 (42%)
Query: 465 FGTPEQLKYLVDECHKAGL 483
+GT + L+ H +
Sbjct: 112 YGTIADFQNLIAAAHAKNI 130
Score = 32.9 bits (75), Expect = 0.72
Identities = 4/19 (21%), Positives = 8/19 (42%)
Query: 484 FGTPEQLKYLVDECHKAGL 502
+GT + L+ H +
Sbjct: 112 YGTIADFQNLIAAAHAKNI 130
Score = 32.9 bits (75), Expect = 0.72
Identities = 4/19 (21%), Positives = 8/19 (42%)
Query: 503 FGTPEQLKYLVDECHKAGL 521
+GT + L+ H +
Sbjct: 112 YGTIADFQNLIAAAHAKNI 130
Score = 32.9 bits (75), Expect = 0.72
Identities = 4/19 (21%), Positives = 8/19 (42%)
Query: 522 FGTPEQLKYLVDECHKAGL 540
+GT + L+ H +
Sbjct: 112 YGTIADFQNLIAAAHAKNI 130
Score = 32.9 bits (75), Expect = 0.72
Identities = 4/19 (21%), Positives = 8/19 (42%)
Query: 541 FGTPEQLKYLVDECHKAGL 559
+GT + L+ H +
Sbjct: 112 YGTIADFQNLIAAAHAKNI 130
Score = 32.9 bits (75), Expect = 0.72
Identities = 4/19 (21%), Positives = 8/19 (42%)
Query: 560 FGTPEQLKYLVDECHKAGL 578
+GT + L+ H +
Sbjct: 112 YGTIADFQNLIAAAHAKNI 130
Score = 32.9 bits (75), Expect = 0.72
Identities = 4/19 (21%), Positives = 8/19 (42%)
Query: 579 FGTPEQLKYLVDECHKAGL 597
+GT + L+ H +
Sbjct: 112 YGTIADFQNLIAAAHAKNI 130
Score = 32.9 bits (75), Expect = 0.72
Identities = 4/19 (21%), Positives = 8/19 (42%)
Query: 598 FGTPEQLKYLVDECHKAGL 616
+GT + L+ H +
Sbjct: 112 YGTIADFQNLIAAAHAKNI 130
Score = 32.9 bits (75), Expect = 0.72
Identities = 4/19 (21%), Positives = 8/19 (42%)
Query: 617 FGTPEQLKYLVDECHKAGL 635
+GT + L+ H +
Sbjct: 112 YGTIADFQNLIAAAHAKNI 130
Score = 32.9 bits (75), Expect = 0.72
Identities = 4/19 (21%), Positives = 8/19 (42%)
Query: 636 FGTPEQLKYLVDECHKAGL 654
+GT + L+ H +
Sbjct: 112 YGTIADFQNLIAAAHAKNI 130
Score = 32.9 bits (75), Expect = 0.72
Identities = 4/19 (21%), Positives = 8/19 (42%)
Query: 655 FGTPEQLKYLVDECHKAGL 673
+GT + L+ H +
Sbjct: 112 YGTIADFQNLIAAAHAKNI 130
Score = 32.9 bits (75), Expect = 0.72
Identities = 4/19 (21%), Positives = 8/19 (42%)
Query: 674 FGTPEQLKYLVDECHKAGL 692
+GT + L+ H +
Sbjct: 112 YGTIADFQNLIAAAHAKNI 130
Score = 32.9 bits (75), Expect = 0.72
Identities = 4/19 (21%), Positives = 8/19 (42%)
Query: 693 FGTPEQLKYLVDECHKAGL 711
+GT + L+ H +
Sbjct: 112 YGTIADFQNLIAAAHAKNI 130
Score = 32.9 bits (75), Expect = 0.72
Identities = 4/19 (21%), Positives = 8/19 (42%)
Query: 712 FGTPEQLKYLVDECHKAGL 730
+GT + L+ H +
Sbjct: 112 YGTIADFQNLIAAAHAKNI 130
Score = 32.9 bits (75), Expect = 0.72
Identities = 4/19 (21%), Positives = 8/19 (42%)
Query: 731 FGTPEQLKYLVDECHKAGL 749
+GT + L+ H +
Sbjct: 112 YGTIADFQNLIAAAHAKNI 130
Score = 32.9 bits (75), Expect = 0.72
Identities = 4/19 (21%), Positives = 8/19 (42%)
Query: 750 FGTPEQLKYLVDECHKAGL 768
+GT + L+ H +
Sbjct: 112 YGTIADFQNLIAAAHAKNI 130
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola
(beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A
{Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A*
1mxd_A* 3qgv_A*
Length = 435
Score = 66.4 bits (162), Expect = 3e-11
Identities = 29/144 (20%), Positives = 47/144 (32%), Gaps = 28/144 (19%)
Query: 1033 FGTPEQLKYLVDECHKAGLYVLLDVVHSH---ASKNVLDGLNEFDGTQACFFHDGPRGTH 1089
FG+ E+L L+ H G+ V+ DVV +H + ++ T G +
Sbjct: 83 FGSKEELVRLIQTAHAYGIKVIADVVINHRAGGDLEWNPFVGDYTWTDFSKVASGKYTAN 142
Query: 1090 PL---------WDSRLF------NYSEIEVLRFLLSNLRW---YLDEYQFDGFRFDGVTS 1131
L D F + + +L + YL FDG+RFD V
Sbjct: 143 YLDFHPNELHCCDEGTFGGFPDICHHKEWDQYWLWKSNESYAAYLRSIGFDGWRFDYVKG 202
Query: 1132 MLYHNHGCGEGFSGHYDEYFGLNV 1155
G + ++G
Sbjct: 203 Y-------GAWVVRDWLNWWGGWA 219
Score = 34.8 bits (80), Expect = 0.21
Identities = 17/52 (32%), Positives = 21/52 (40%), Gaps = 2/52 (3%)
Query: 769 FGTPEQLKYLVDECHKAGLLCFMHVVC--AAGDFNNWNREEFAYKKLDFGKW 818
FG+ E+L L+ H G+ VV AG WN Y DF K
Sbjct: 83 FGSKEELVRLIQTAHAYGIKVIADVVINHRAGGDLEWNPFVGDYTWTDFSKV 134
Score = 31.3 bits (71), Expect = 2.4
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 123 FGTPEQLKYLVDECHKAGL 141
FG+ E+L L+ H G+
Sbjct: 83 FGSKEELVRLIQTAHAYGI 101
Score = 31.3 bits (71), Expect = 2.4
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 142 FGTPEQLKYLVDECHKAGL 160
FG+ E+L L+ H G+
Sbjct: 83 FGSKEELVRLIQTAHAYGI 101
Score = 31.3 bits (71), Expect = 2.4
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 161 FGTPEQLKYLVDECHKAGL 179
FG+ E+L L+ H G+
Sbjct: 83 FGSKEELVRLIQTAHAYGI 101
Score = 31.3 bits (71), Expect = 2.4
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 180 FGTPEQLKYLVDECHKAGL 198
FG+ E+L L+ H G+
Sbjct: 83 FGSKEELVRLIQTAHAYGI 101
Score = 31.3 bits (71), Expect = 2.4
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 199 FGTPEQLKYLVDECHKAGL 217
FG+ E+L L+ H G+
Sbjct: 83 FGSKEELVRLIQTAHAYGI 101
Score = 31.3 bits (71), Expect = 2.4
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 218 FGTPEQLKYLVDECHKAGL 236
FG+ E+L L+ H G+
Sbjct: 83 FGSKEELVRLIQTAHAYGI 101
Score = 31.3 bits (71), Expect = 2.4
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 237 FGTPEQLKYLVDECHKAGL 255
FG+ E+L L+ H G+
Sbjct: 83 FGSKEELVRLIQTAHAYGI 101
Score = 31.3 bits (71), Expect = 2.4
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 256 FGTPEQLKYLVDECHKAGL 274
FG+ E+L L+ H G+
Sbjct: 83 FGSKEELVRLIQTAHAYGI 101
Score = 31.3 bits (71), Expect = 2.4
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 275 FGTPEQLKYLVDECHKAGL 293
FG+ E+L L+ H G+
Sbjct: 83 FGSKEELVRLIQTAHAYGI 101
Score = 31.3 bits (71), Expect = 2.4
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 294 FGTPEQLKYLVDECHKAGL 312
FG+ E+L L+ H G+
Sbjct: 83 FGSKEELVRLIQTAHAYGI 101
Score = 31.3 bits (71), Expect = 2.4
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 313 FGTPEQLKYLVDECHKAGL 331
FG+ E+L L+ H G+
Sbjct: 83 FGSKEELVRLIQTAHAYGI 101
Score = 31.3 bits (71), Expect = 2.4
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 332 FGTPEQLKYLVDECHKAGL 350
FG+ E+L L+ H G+
Sbjct: 83 FGSKEELVRLIQTAHAYGI 101
Score = 31.3 bits (71), Expect = 2.4
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 351 FGTPEQLKYLVDECHKAGL 369
FG+ E+L L+ H G+
Sbjct: 83 FGSKEELVRLIQTAHAYGI 101
Score = 31.3 bits (71), Expect = 2.4
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 370 FGTPEQLKYLVDECHKAGL 388
FG+ E+L L+ H G+
Sbjct: 83 FGSKEELVRLIQTAHAYGI 101
Score = 31.3 bits (71), Expect = 2.4
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 389 FGTPEQLKYLVDECHKAGL 407
FG+ E+L L+ H G+
Sbjct: 83 FGSKEELVRLIQTAHAYGI 101
Score = 31.3 bits (71), Expect = 2.4
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 408 FGTPEQLKYLVDECHKAGL 426
FG+ E+L L+ H G+
Sbjct: 83 FGSKEELVRLIQTAHAYGI 101
Score = 31.3 bits (71), Expect = 2.4
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 427 FGTPEQLKYLVDECHKAGL 445
FG+ E+L L+ H G+
Sbjct: 83 FGSKEELVRLIQTAHAYGI 101
Score = 31.3 bits (71), Expect = 2.4
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 446 FGTPEQLKYLVDECHKAGL 464
FG+ E+L L+ H G+
Sbjct: 83 FGSKEELVRLIQTAHAYGI 101
Score = 31.3 bits (71), Expect = 2.4
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 465 FGTPEQLKYLVDECHKAGL 483
FG+ E+L L+ H G+
Sbjct: 83 FGSKEELVRLIQTAHAYGI 101
Score = 31.3 bits (71), Expect = 2.4
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 484 FGTPEQLKYLVDECHKAGL 502
FG+ E+L L+ H G+
Sbjct: 83 FGSKEELVRLIQTAHAYGI 101
Score = 31.3 bits (71), Expect = 2.4
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 503 FGTPEQLKYLVDECHKAGL 521
FG+ E+L L+ H G+
Sbjct: 83 FGSKEELVRLIQTAHAYGI 101
Score = 31.3 bits (71), Expect = 2.4
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 522 FGTPEQLKYLVDECHKAGL 540
FG+ E+L L+ H G+
Sbjct: 83 FGSKEELVRLIQTAHAYGI 101
Score = 31.3 bits (71), Expect = 2.4
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 541 FGTPEQLKYLVDECHKAGL 559
FG+ E+L L+ H G+
Sbjct: 83 FGSKEELVRLIQTAHAYGI 101
Score = 31.3 bits (71), Expect = 2.4
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 560 FGTPEQLKYLVDECHKAGL 578
FG+ E+L L+ H G+
Sbjct: 83 FGSKEELVRLIQTAHAYGI 101
Score = 31.3 bits (71), Expect = 2.4
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 579 FGTPEQLKYLVDECHKAGL 597
FG+ E+L L+ H G+
Sbjct: 83 FGSKEELVRLIQTAHAYGI 101
Score = 31.3 bits (71), Expect = 2.4
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 598 FGTPEQLKYLVDECHKAGL 616
FG+ E+L L+ H G+
Sbjct: 83 FGSKEELVRLIQTAHAYGI 101
Score = 31.3 bits (71), Expect = 2.4
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 617 FGTPEQLKYLVDECHKAGL 635
FG+ E+L L+ H G+
Sbjct: 83 FGSKEELVRLIQTAHAYGI 101
Score = 31.3 bits (71), Expect = 2.4
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 636 FGTPEQLKYLVDECHKAGL 654
FG+ E+L L+ H G+
Sbjct: 83 FGSKEELVRLIQTAHAYGI 101
Score = 31.3 bits (71), Expect = 2.4
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 655 FGTPEQLKYLVDECHKAGL 673
FG+ E+L L+ H G+
Sbjct: 83 FGSKEELVRLIQTAHAYGI 101
Score = 31.3 bits (71), Expect = 2.4
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 674 FGTPEQLKYLVDECHKAGL 692
FG+ E+L L+ H G+
Sbjct: 83 FGSKEELVRLIQTAHAYGI 101
Score = 31.3 bits (71), Expect = 2.4
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 693 FGTPEQLKYLVDECHKAGL 711
FG+ E+L L+ H G+
Sbjct: 83 FGSKEELVRLIQTAHAYGI 101
Score = 31.3 bits (71), Expect = 2.4
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 712 FGTPEQLKYLVDECHKAGL 730
FG+ E+L L+ H G+
Sbjct: 83 FGSKEELVRLIQTAHAYGI 101
Score = 31.3 bits (71), Expect = 2.4
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 731 FGTPEQLKYLVDECHKAGL 749
FG+ E+L L+ H G+
Sbjct: 83 FGSKEELVRLIQTAHAYGI 101
Score = 31.3 bits (71), Expect = 2.4
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 750 FGTPEQLKYLVDECHKAGL 768
FG+ E+L L+ H G+
Sbjct: 83 FGSKEELVRLIQTAHAYGI 101
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus
stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB:
1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A*
Length = 588
Score = 65.5 bits (160), Expect = 7e-11
Identities = 36/130 (27%), Positives = 56/130 (43%), Gaps = 21/130 (16%)
Query: 1022 YLVDECHKAGLFGTPEQLKYLVDECHKAGLYVLLDVVHSHASKN---VLDGLNEFDGTQA 1078
+ VD FG E LK L+D CH+ G+ V+LD V +H D + ++
Sbjct: 213 FEVDP-----HFGDKETLKTLIDRCHEKGIRVMLDAVFNHCGYEFAPFQDVWKNGESSKY 267
Query: 1079 C---FFHDGPRGTHPLWDSRLF---------NYSEIEVLRFLLSNLRWYLDEYQFDGFRF 1126
H+ P T P + F N + EV R+LL +++ E+ DG+R
Sbjct: 268 KDWFHIHEFPLQTEPRPNYDTFAFVPQMPKLNTANPEVKRYLLDVATYWIREFDIDGWRL 327
Query: 1127 DGVTSMLYHN 1136
D V + + H
Sbjct: 328 D-VANEIDHE 336
Score = 31.6 bits (72), Expect = 2.1
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 9/37 (24%)
Query: 758 YLVDECHKAGLFGTPEQLKYLVDECHKAGLLCFMHVV 794
+ VD FG E LK L+D CH+ G + V+
Sbjct: 213 FEVDP-----HFGDKETLKTLIDRCHEKG----IRVM 240
Score = 29.7 bits (67), Expect = 7.5
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 5/30 (16%)
Query: 131 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 160
+ VD FG E LK L+D CH+ G+
Sbjct: 213 FEVDP-----HFGDKETLKTLIDRCHEKGI 237
Score = 29.7 bits (67), Expect = 7.5
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 5/30 (16%)
Query: 150 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 179
+ VD FG E LK L+D CH+ G+
Sbjct: 213 FEVDP-----HFGDKETLKTLIDRCHEKGI 237
Score = 29.7 bits (67), Expect = 7.5
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 5/30 (16%)
Query: 169 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 198
+ VD FG E LK L+D CH+ G+
Sbjct: 213 FEVDP-----HFGDKETLKTLIDRCHEKGI 237
Score = 29.7 bits (67), Expect = 7.5
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 5/30 (16%)
Query: 188 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 217
+ VD FG E LK L+D CH+ G+
Sbjct: 213 FEVDP-----HFGDKETLKTLIDRCHEKGI 237
Score = 29.7 bits (67), Expect = 7.5
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 5/30 (16%)
Query: 207 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 236
+ VD FG E LK L+D CH+ G+
Sbjct: 213 FEVDP-----HFGDKETLKTLIDRCHEKGI 237
Score = 29.7 bits (67), Expect = 7.5
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 5/30 (16%)
Query: 226 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 255
+ VD FG E LK L+D CH+ G+
Sbjct: 213 FEVDP-----HFGDKETLKTLIDRCHEKGI 237
Score = 29.7 bits (67), Expect = 7.5
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 5/30 (16%)
Query: 245 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 274
+ VD FG E LK L+D CH+ G+
Sbjct: 213 FEVDP-----HFGDKETLKTLIDRCHEKGI 237
Score = 29.7 bits (67), Expect = 7.5
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 5/30 (16%)
Query: 264 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 293
+ VD FG E LK L+D CH+ G+
Sbjct: 213 FEVDP-----HFGDKETLKTLIDRCHEKGI 237
Score = 29.7 bits (67), Expect = 7.5
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 5/30 (16%)
Query: 283 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 312
+ VD FG E LK L+D CH+ G+
Sbjct: 213 FEVDP-----HFGDKETLKTLIDRCHEKGI 237
Score = 29.7 bits (67), Expect = 7.5
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 5/30 (16%)
Query: 302 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 331
+ VD FG E LK L+D CH+ G+
Sbjct: 213 FEVDP-----HFGDKETLKTLIDRCHEKGI 237
Score = 29.7 bits (67), Expect = 7.5
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 5/30 (16%)
Query: 321 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 350
+ VD FG E LK L+D CH+ G+
Sbjct: 213 FEVDP-----HFGDKETLKTLIDRCHEKGI 237
Score = 29.7 bits (67), Expect = 7.5
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 5/30 (16%)
Query: 340 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 369
+ VD FG E LK L+D CH+ G+
Sbjct: 213 FEVDP-----HFGDKETLKTLIDRCHEKGI 237
Score = 29.7 bits (67), Expect = 7.5
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 5/30 (16%)
Query: 359 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 388
+ VD FG E LK L+D CH+ G+
Sbjct: 213 FEVDP-----HFGDKETLKTLIDRCHEKGI 237
Score = 29.7 bits (67), Expect = 7.5
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 5/30 (16%)
Query: 378 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 407
+ VD FG E LK L+D CH+ G+
Sbjct: 213 FEVDP-----HFGDKETLKTLIDRCHEKGI 237
Score = 29.7 bits (67), Expect = 7.5
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 5/30 (16%)
Query: 397 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 426
+ VD FG E LK L+D CH+ G+
Sbjct: 213 FEVDP-----HFGDKETLKTLIDRCHEKGI 237
Score = 29.7 bits (67), Expect = 7.5
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 5/30 (16%)
Query: 416 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 445
+ VD FG E LK L+D CH+ G+
Sbjct: 213 FEVDP-----HFGDKETLKTLIDRCHEKGI 237
Score = 29.7 bits (67), Expect = 7.5
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 5/30 (16%)
Query: 435 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 464
+ VD FG E LK L+D CH+ G+
Sbjct: 213 FEVDP-----HFGDKETLKTLIDRCHEKGI 237
Score = 29.7 bits (67), Expect = 7.5
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 5/30 (16%)
Query: 454 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 483
+ VD FG E LK L+D CH+ G+
Sbjct: 213 FEVDP-----HFGDKETLKTLIDRCHEKGI 237
Score = 29.7 bits (67), Expect = 7.5
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 5/30 (16%)
Query: 473 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 502
+ VD FG E LK L+D CH+ G+
Sbjct: 213 FEVDP-----HFGDKETLKTLIDRCHEKGI 237
Score = 29.7 bits (67), Expect = 7.5
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 5/30 (16%)
Query: 492 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 521
+ VD FG E LK L+D CH+ G+
Sbjct: 213 FEVDP-----HFGDKETLKTLIDRCHEKGI 237
Score = 29.7 bits (67), Expect = 7.5
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 5/30 (16%)
Query: 511 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 540
+ VD FG E LK L+D CH+ G+
Sbjct: 213 FEVDP-----HFGDKETLKTLIDRCHEKGI 237
Score = 29.7 bits (67), Expect = 7.5
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 5/30 (16%)
Query: 530 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 559
+ VD FG E LK L+D CH+ G+
Sbjct: 213 FEVDP-----HFGDKETLKTLIDRCHEKGI 237
Score = 29.7 bits (67), Expect = 7.5
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 5/30 (16%)
Query: 549 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 578
+ VD FG E LK L+D CH+ G+
Sbjct: 213 FEVDP-----HFGDKETLKTLIDRCHEKGI 237
Score = 29.7 bits (67), Expect = 7.5
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 5/30 (16%)
Query: 568 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 597
+ VD FG E LK L+D CH+ G+
Sbjct: 213 FEVDP-----HFGDKETLKTLIDRCHEKGI 237
Score = 29.7 bits (67), Expect = 7.5
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 5/30 (16%)
Query: 587 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 616
+ VD FG E LK L+D CH+ G+
Sbjct: 213 FEVDP-----HFGDKETLKTLIDRCHEKGI 237
Score = 29.7 bits (67), Expect = 7.5
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 5/30 (16%)
Query: 606 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 635
+ VD FG E LK L+D CH+ G+
Sbjct: 213 FEVDP-----HFGDKETLKTLIDRCHEKGI 237
Score = 29.7 bits (67), Expect = 7.5
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 5/30 (16%)
Query: 625 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 654
+ VD FG E LK L+D CH+ G+
Sbjct: 213 FEVDP-----HFGDKETLKTLIDRCHEKGI 237
Score = 29.7 bits (67), Expect = 7.5
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 5/30 (16%)
Query: 644 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 673
+ VD FG E LK L+D CH+ G+
Sbjct: 213 FEVDP-----HFGDKETLKTLIDRCHEKGI 237
Score = 29.7 bits (67), Expect = 7.5
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 5/30 (16%)
Query: 663 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 692
+ VD FG E LK L+D CH+ G+
Sbjct: 213 FEVDP-----HFGDKETLKTLIDRCHEKGI 237
Score = 29.7 bits (67), Expect = 7.5
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 5/30 (16%)
Query: 682 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 711
+ VD FG E LK L+D CH+ G+
Sbjct: 213 FEVDP-----HFGDKETLKTLIDRCHEKGI 237
Score = 29.7 bits (67), Expect = 7.5
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 5/30 (16%)
Query: 701 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 730
+ VD FG E LK L+D CH+ G+
Sbjct: 213 FEVDP-----HFGDKETLKTLIDRCHEKGI 237
Score = 29.7 bits (67), Expect = 7.5
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 5/30 (16%)
Query: 720 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 749
+ VD FG E LK L+D CH+ G+
Sbjct: 213 FEVDP-----HFGDKETLKTLIDRCHEKGI 237
Score = 29.7 bits (67), Expect = 7.5
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 5/30 (16%)
Query: 739 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 768
+ VD FG E LK L+D CH+ G+
Sbjct: 213 FEVDP-----HFGDKETLKTLIDRCHEKGI 237
Score = 29.7 bits (67), Expect = 8.1
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 123 FGTPEQLKYLVDECHKAGL 141
FG E LK L+D CH+ G+
Sbjct: 219 FGDKETLKTLIDRCHEKGI 237
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2,
protein structure initiative; 2.00A {Lactobacillus
plantarum}
Length = 449
Score = 64.3 bits (157), Expect = 1e-10
Identities = 40/195 (20%), Positives = 69/195 (35%), Gaps = 46/195 (23%)
Query: 1033 FGTPEQLKYLVDECHKAGLYVLLDVVHSHASKNVLDGLNEFDGTQACFFH---DGPRGTH 1089
+GT K L D H+ G+ V+LD+V++H S + + +F+ DG
Sbjct: 80 YGTLADFKALTDRAHELGMKVMLDIVYNHTSPD-----SVLATEHPEWFYHDADGQLTNK 134
Query: 1090 PLWDSRL--FNYSEIEVLRFLLSNLRWYLDEYQFDGFRFDGVTSMLYHNHGCGEGFSGHY 1147
S + +Y E+ ++ + L ++ DG+R D
Sbjct: 135 VGDWSDVKDLDYGHHELWQYQIDTLLYWSQF--VDGYRCD------VAPL---------- 176
Query: 1148 DEYFGLNVDTDALIYLMVANKFLHDKYPEIITIAEDVSGMPASCRPVTEGGTGFDYRLVS 1207
V D + + A K ++ KYPE + +AE ++ E
Sbjct: 177 -------VPLD---FWLEARKQVNAKYPETLWLAE------SAGSGFIE--ELRSQGYTG 218
Query: 1208 LEGSALSALFDAAMN 1222
L S L FD +
Sbjct: 219 LSDSELYQAFDMTYD 233
Score = 31.2 bits (71), Expect = 2.5
Identities = 9/26 (34%), Positives = 12/26 (46%), Gaps = 4/26 (15%)
Query: 769 FGTPEQLKYLVDECHKAGLLCFMHVV 794
+GT K L D H+ G M V+
Sbjct: 80 YGTLADFKALTDRAHELG----MKVM 101
Score = 31.2 bits (71), Expect = 2.8
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 123 FGTPEQLKYLVDECHKAGL 141
+GT K L D H+ G+
Sbjct: 80 YGTLADFKALTDRAHELGM 98
Score = 31.2 bits (71), Expect = 2.8
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 142 FGTPEQLKYLVDECHKAGL 160
+GT K L D H+ G+
Sbjct: 80 YGTLADFKALTDRAHELGM 98
Score = 31.2 bits (71), Expect = 2.8
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 161 FGTPEQLKYLVDECHKAGL 179
+GT K L D H+ G+
Sbjct: 80 YGTLADFKALTDRAHELGM 98
Score = 31.2 bits (71), Expect = 2.8
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 180 FGTPEQLKYLVDECHKAGL 198
+GT K L D H+ G+
Sbjct: 80 YGTLADFKALTDRAHELGM 98
Score = 31.2 bits (71), Expect = 2.8
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 199 FGTPEQLKYLVDECHKAGL 217
+GT K L D H+ G+
Sbjct: 80 YGTLADFKALTDRAHELGM 98
Score = 31.2 bits (71), Expect = 2.8
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 218 FGTPEQLKYLVDECHKAGL 236
+GT K L D H+ G+
Sbjct: 80 YGTLADFKALTDRAHELGM 98
Score = 31.2 bits (71), Expect = 2.8
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 237 FGTPEQLKYLVDECHKAGL 255
+GT K L D H+ G+
Sbjct: 80 YGTLADFKALTDRAHELGM 98
Score = 31.2 bits (71), Expect = 2.8
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 256 FGTPEQLKYLVDECHKAGL 274
+GT K L D H+ G+
Sbjct: 80 YGTLADFKALTDRAHELGM 98
Score = 31.2 bits (71), Expect = 2.8
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 275 FGTPEQLKYLVDECHKAGL 293
+GT K L D H+ G+
Sbjct: 80 YGTLADFKALTDRAHELGM 98
Score = 31.2 bits (71), Expect = 2.8
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 294 FGTPEQLKYLVDECHKAGL 312
+GT K L D H+ G+
Sbjct: 80 YGTLADFKALTDRAHELGM 98
Score = 31.2 bits (71), Expect = 2.8
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 313 FGTPEQLKYLVDECHKAGL 331
+GT K L D H+ G+
Sbjct: 80 YGTLADFKALTDRAHELGM 98
Score = 31.2 bits (71), Expect = 2.8
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 332 FGTPEQLKYLVDECHKAGL 350
+GT K L D H+ G+
Sbjct: 80 YGTLADFKALTDRAHELGM 98
Score = 31.2 bits (71), Expect = 2.8
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 351 FGTPEQLKYLVDECHKAGL 369
+GT K L D H+ G+
Sbjct: 80 YGTLADFKALTDRAHELGM 98
Score = 31.2 bits (71), Expect = 2.8
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 370 FGTPEQLKYLVDECHKAGL 388
+GT K L D H+ G+
Sbjct: 80 YGTLADFKALTDRAHELGM 98
Score = 31.2 bits (71), Expect = 2.8
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 389 FGTPEQLKYLVDECHKAGL 407
+GT K L D H+ G+
Sbjct: 80 YGTLADFKALTDRAHELGM 98
Score = 31.2 bits (71), Expect = 2.8
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 408 FGTPEQLKYLVDECHKAGL 426
+GT K L D H+ G+
Sbjct: 80 YGTLADFKALTDRAHELGM 98
Score = 31.2 bits (71), Expect = 2.8
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 427 FGTPEQLKYLVDECHKAGL 445
+GT K L D H+ G+
Sbjct: 80 YGTLADFKALTDRAHELGM 98
Score = 31.2 bits (71), Expect = 2.8
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 446 FGTPEQLKYLVDECHKAGL 464
+GT K L D H+ G+
Sbjct: 80 YGTLADFKALTDRAHELGM 98
Score = 31.2 bits (71), Expect = 2.8
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 465 FGTPEQLKYLVDECHKAGL 483
+GT K L D H+ G+
Sbjct: 80 YGTLADFKALTDRAHELGM 98
Score = 31.2 bits (71), Expect = 2.8
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 484 FGTPEQLKYLVDECHKAGL 502
+GT K L D H+ G+
Sbjct: 80 YGTLADFKALTDRAHELGM 98
Score = 31.2 bits (71), Expect = 2.8
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 503 FGTPEQLKYLVDECHKAGL 521
+GT K L D H+ G+
Sbjct: 80 YGTLADFKALTDRAHELGM 98
Score = 31.2 bits (71), Expect = 2.8
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 522 FGTPEQLKYLVDECHKAGL 540
+GT K L D H+ G+
Sbjct: 80 YGTLADFKALTDRAHELGM 98
Score = 31.2 bits (71), Expect = 2.8
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 541 FGTPEQLKYLVDECHKAGL 559
+GT K L D H+ G+
Sbjct: 80 YGTLADFKALTDRAHELGM 98
Score = 31.2 bits (71), Expect = 2.8
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 560 FGTPEQLKYLVDECHKAGL 578
+GT K L D H+ G+
Sbjct: 80 YGTLADFKALTDRAHELGM 98
Score = 31.2 bits (71), Expect = 2.8
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 579 FGTPEQLKYLVDECHKAGL 597
+GT K L D H+ G+
Sbjct: 80 YGTLADFKALTDRAHELGM 98
Score = 31.2 bits (71), Expect = 2.8
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 598 FGTPEQLKYLVDECHKAGL 616
+GT K L D H+ G+
Sbjct: 80 YGTLADFKALTDRAHELGM 98
Score = 31.2 bits (71), Expect = 2.8
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 617 FGTPEQLKYLVDECHKAGL 635
+GT K L D H+ G+
Sbjct: 80 YGTLADFKALTDRAHELGM 98
Score = 31.2 bits (71), Expect = 2.8
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 636 FGTPEQLKYLVDECHKAGL 654
+GT K L D H+ G+
Sbjct: 80 YGTLADFKALTDRAHELGM 98
Score = 31.2 bits (71), Expect = 2.8
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 655 FGTPEQLKYLVDECHKAGL 673
+GT K L D H+ G+
Sbjct: 80 YGTLADFKALTDRAHELGM 98
Score = 31.2 bits (71), Expect = 2.8
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 674 FGTPEQLKYLVDECHKAGL 692
+GT K L D H+ G+
Sbjct: 80 YGTLADFKALTDRAHELGM 98
Score = 31.2 bits (71), Expect = 2.8
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 693 FGTPEQLKYLVDECHKAGL 711
+GT K L D H+ G+
Sbjct: 80 YGTLADFKALTDRAHELGM 98
Score = 31.2 bits (71), Expect = 2.8
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 712 FGTPEQLKYLVDECHKAGL 730
+GT K L D H+ G+
Sbjct: 80 YGTLADFKALTDRAHELGM 98
Score = 31.2 bits (71), Expect = 2.8
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 731 FGTPEQLKYLVDECHKAGL 749
+GT K L D H+ G+
Sbjct: 80 YGTLADFKALTDRAHELGM 98
Score = 31.2 bits (71), Expect = 2.8
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 750 FGTPEQLKYLVDECHKAGL 768
+GT K L D H+ G+
Sbjct: 80 YGTLADFKALTDRAHELGM 98
>1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif,
hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus
subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A
Length = 422
Score = 63.7 bits (155), Expect = 2e-10
Identities = 23/112 (20%), Positives = 41/112 (36%), Gaps = 16/112 (14%)
Query: 1033 FGTPEQLKYLVDECHKAGLYVLLDVVHSHASKNVLDGLNEFDGTQACFFHDGP------- 1085
GT ++ K + + G+ V++D V +H + + NE +
Sbjct: 71 LGTEQEFKEMCAAAEEYGIKVIVDAVINHTTFDYAAISNEVKSIPNWTHGNTQIKNWSDR 130
Query: 1086 -----RGTHPLWDSRLFNYSEIEVLRFLLSNLRWYLDEYQFDGFRFDGVTSM 1132
L+D +N +V +L L L++ DGFRFD +
Sbjct: 131 WDVTQNSLLGLYD---WNTQNTQVQSYLKRFLERALNDG-ADGFRFDAAKHI 178
Score = 33.6 bits (77), Expect = 0.38
Identities = 7/45 (15%), Positives = 16/45 (35%), Gaps = 2/45 (4%)
Query: 769 FGTPEQLKYLVDECHKAGLLCFMHVVC--AAGDFNNWNREEFAYK 811
GT ++ K + + G+ + V D+ + E +
Sbjct: 71 LGTEQEFKEMCAAAEEYGIKVIVDAVINHTTFDYAAISNEVKSIP 115
Score = 32.9 bits (75), Expect = 0.72
Identities = 5/25 (20%), Positives = 10/25 (40%)
Query: 117 YILTGVFGTPEQLKYLVDECHKAGL 141
I GT ++ K + + G+
Sbjct: 65 QIGNRYLGTEQEFKEMCAAAEEYGI 89
Score = 31.7 bits (72), Expect = 1.6
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 142 FGTPEQLKYLVDECHKAGL 160
GT ++ K + + G+
Sbjct: 71 LGTEQEFKEMCAAAEEYGI 89
Score = 31.7 bits (72), Expect = 1.6
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 161 FGTPEQLKYLVDECHKAGL 179
GT ++ K + + G+
Sbjct: 71 LGTEQEFKEMCAAAEEYGI 89
Score = 31.7 bits (72), Expect = 1.6
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 180 FGTPEQLKYLVDECHKAGL 198
GT ++ K + + G+
Sbjct: 71 LGTEQEFKEMCAAAEEYGI 89
Score = 31.7 bits (72), Expect = 1.6
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 199 FGTPEQLKYLVDECHKAGL 217
GT ++ K + + G+
Sbjct: 71 LGTEQEFKEMCAAAEEYGI 89
Score = 31.7 bits (72), Expect = 1.6
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 218 FGTPEQLKYLVDECHKAGL 236
GT ++ K + + G+
Sbjct: 71 LGTEQEFKEMCAAAEEYGI 89
Score = 31.7 bits (72), Expect = 1.6
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 237 FGTPEQLKYLVDECHKAGL 255
GT ++ K + + G+
Sbjct: 71 LGTEQEFKEMCAAAEEYGI 89
Score = 31.7 bits (72), Expect = 1.6
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 256 FGTPEQLKYLVDECHKAGL 274
GT ++ K + + G+
Sbjct: 71 LGTEQEFKEMCAAAEEYGI 89
Score = 31.7 bits (72), Expect = 1.6
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 275 FGTPEQLKYLVDECHKAGL 293
GT ++ K + + G+
Sbjct: 71 LGTEQEFKEMCAAAEEYGI 89
Score = 31.7 bits (72), Expect = 1.6
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 294 FGTPEQLKYLVDECHKAGL 312
GT ++ K + + G+
Sbjct: 71 LGTEQEFKEMCAAAEEYGI 89
Score = 31.7 bits (72), Expect = 1.6
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 313 FGTPEQLKYLVDECHKAGL 331
GT ++ K + + G+
Sbjct: 71 LGTEQEFKEMCAAAEEYGI 89
Score = 31.7 bits (72), Expect = 1.6
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 332 FGTPEQLKYLVDECHKAGL 350
GT ++ K + + G+
Sbjct: 71 LGTEQEFKEMCAAAEEYGI 89
Score = 31.7 bits (72), Expect = 1.6
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 351 FGTPEQLKYLVDECHKAGL 369
GT ++ K + + G+
Sbjct: 71 LGTEQEFKEMCAAAEEYGI 89
Score = 31.7 bits (72), Expect = 1.6
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 370 FGTPEQLKYLVDECHKAGL 388
GT ++ K + + G+
Sbjct: 71 LGTEQEFKEMCAAAEEYGI 89
Score = 31.7 bits (72), Expect = 1.6
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 389 FGTPEQLKYLVDECHKAGL 407
GT ++ K + + G+
Sbjct: 71 LGTEQEFKEMCAAAEEYGI 89
Score = 31.7 bits (72), Expect = 1.6
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 408 FGTPEQLKYLVDECHKAGL 426
GT ++ K + + G+
Sbjct: 71 LGTEQEFKEMCAAAEEYGI 89
Score = 31.7 bits (72), Expect = 1.6
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 427 FGTPEQLKYLVDECHKAGL 445
GT ++ K + + G+
Sbjct: 71 LGTEQEFKEMCAAAEEYGI 89
Score = 31.7 bits (72), Expect = 1.6
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 446 FGTPEQLKYLVDECHKAGL 464
GT ++ K + + G+
Sbjct: 71 LGTEQEFKEMCAAAEEYGI 89
Score = 31.7 bits (72), Expect = 1.6
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 465 FGTPEQLKYLVDECHKAGL 483
GT ++ K + + G+
Sbjct: 71 LGTEQEFKEMCAAAEEYGI 89
Score = 31.7 bits (72), Expect = 1.6
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 484 FGTPEQLKYLVDECHKAGL 502
GT ++ K + + G+
Sbjct: 71 LGTEQEFKEMCAAAEEYGI 89
Score = 31.7 bits (72), Expect = 1.6
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 503 FGTPEQLKYLVDECHKAGL 521
GT ++ K + + G+
Sbjct: 71 LGTEQEFKEMCAAAEEYGI 89
Score = 31.7 bits (72), Expect = 1.6
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 522 FGTPEQLKYLVDECHKAGL 540
GT ++ K + + G+
Sbjct: 71 LGTEQEFKEMCAAAEEYGI 89
Score = 31.7 bits (72), Expect = 1.6
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 541 FGTPEQLKYLVDECHKAGL 559
GT ++ K + + G+
Sbjct: 71 LGTEQEFKEMCAAAEEYGI 89
Score = 31.7 bits (72), Expect = 1.6
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 560 FGTPEQLKYLVDECHKAGL 578
GT ++ K + + G+
Sbjct: 71 LGTEQEFKEMCAAAEEYGI 89
Score = 31.7 bits (72), Expect = 1.6
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 579 FGTPEQLKYLVDECHKAGL 597
GT ++ K + + G+
Sbjct: 71 LGTEQEFKEMCAAAEEYGI 89
Score = 31.7 bits (72), Expect = 1.6
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 598 FGTPEQLKYLVDECHKAGL 616
GT ++ K + + G+
Sbjct: 71 LGTEQEFKEMCAAAEEYGI 89
Score = 31.7 bits (72), Expect = 1.6
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 617 FGTPEQLKYLVDECHKAGL 635
GT ++ K + + G+
Sbjct: 71 LGTEQEFKEMCAAAEEYGI 89
Score = 31.7 bits (72), Expect = 1.6
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 636 FGTPEQLKYLVDECHKAGL 654
GT ++ K + + G+
Sbjct: 71 LGTEQEFKEMCAAAEEYGI 89
Score = 31.7 bits (72), Expect = 1.6
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 655 FGTPEQLKYLVDECHKAGL 673
GT ++ K + + G+
Sbjct: 71 LGTEQEFKEMCAAAEEYGI 89
Score = 31.7 bits (72), Expect = 1.6
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 674 FGTPEQLKYLVDECHKAGL 692
GT ++ K + + G+
Sbjct: 71 LGTEQEFKEMCAAAEEYGI 89
Score = 31.7 bits (72), Expect = 1.6
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 693 FGTPEQLKYLVDECHKAGL 711
GT ++ K + + G+
Sbjct: 71 LGTEQEFKEMCAAAEEYGI 89
Score = 31.7 bits (72), Expect = 1.6
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 712 FGTPEQLKYLVDECHKAGL 730
GT ++ K + + G+
Sbjct: 71 LGTEQEFKEMCAAAEEYGI 89
Score = 31.7 bits (72), Expect = 1.6
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 731 FGTPEQLKYLVDECHKAGL 749
GT ++ K + + G+
Sbjct: 71 LGTEQEFKEMCAAAEEYGI 89
Score = 31.7 bits (72), Expect = 1.6
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 750 FGTPEQLKYLVDECHKAGL 768
GT ++ K + + G+
Sbjct: 71 LGTEQEFKEMCAAAEEYGI 89
>1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD;
1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2
b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A*
Length = 686
Score = 64.5 bits (157), Expect = 2e-10
Identities = 23/126 (18%), Positives = 40/126 (31%), Gaps = 32/126 (25%)
Query: 1033 FGTPEQLKYLVDECHKAGLYVLLDVVHSHASKNVL--------DGLNEFDGTQACFFHDG 1084
FG LV++ H+ G+ V++D V +H++ L +F D
Sbjct: 104 FGNWTTFDTLVNDAHQNGIKVIVDFVPNHSTPFKANDSTFAEGGALYNNGTYMGNYFDDA 163
Query: 1085 PRGT-HPL-----WDSRL-----------------FNYSEIEVLRFLLSNLRWYLDEYQF 1121
+G H WD R + + ++L + +
Sbjct: 164 TKGYFHHNGDISNWDDRYEAQWKNFTDPAGFSLADLSQENGTIAQYLTDAAVQLV-AHGA 222
Query: 1122 DGFRFD 1127
DG R D
Sbjct: 223 DGLRID 228
Score = 34.0 bits (78), Expect = 0.40
Identities = 7/26 (26%), Positives = 12/26 (46%), Gaps = 4/26 (15%)
Query: 769 FGTPEQLKYLVDECHKAGLLCFMHVV 794
FG LV++ H+ G + V+
Sbjct: 104 FGNWTTFDTLVNDAHQNG----IKVI 125
Score = 32.5 bits (74), Expect = 1.2
Identities = 6/19 (31%), Positives = 10/19 (52%)
Query: 123 FGTPEQLKYLVDECHKAGL 141
FG LV++ H+ G+
Sbjct: 104 FGNWTTFDTLVNDAHQNGI 122
Score = 32.5 bits (74), Expect = 1.2
Identities = 6/19 (31%), Positives = 10/19 (52%)
Query: 142 FGTPEQLKYLVDECHKAGL 160
FG LV++ H+ G+
Sbjct: 104 FGNWTTFDTLVNDAHQNGI 122
Score = 32.5 bits (74), Expect = 1.2
Identities = 6/19 (31%), Positives = 10/19 (52%)
Query: 161 FGTPEQLKYLVDECHKAGL 179
FG LV++ H+ G+
Sbjct: 104 FGNWTTFDTLVNDAHQNGI 122
Score = 32.5 bits (74), Expect = 1.2
Identities = 6/19 (31%), Positives = 10/19 (52%)
Query: 180 FGTPEQLKYLVDECHKAGL 198
FG LV++ H+ G+
Sbjct: 104 FGNWTTFDTLVNDAHQNGI 122
Score = 32.5 bits (74), Expect = 1.2
Identities = 6/19 (31%), Positives = 10/19 (52%)
Query: 199 FGTPEQLKYLVDECHKAGL 217
FG LV++ H+ G+
Sbjct: 104 FGNWTTFDTLVNDAHQNGI 122
Score = 32.5 bits (74), Expect = 1.2
Identities = 6/19 (31%), Positives = 10/19 (52%)
Query: 218 FGTPEQLKYLVDECHKAGL 236
FG LV++ H+ G+
Sbjct: 104 FGNWTTFDTLVNDAHQNGI 122
Score = 32.5 bits (74), Expect = 1.2
Identities = 6/19 (31%), Positives = 10/19 (52%)
Query: 237 FGTPEQLKYLVDECHKAGL 255
FG LV++ H+ G+
Sbjct: 104 FGNWTTFDTLVNDAHQNGI 122
Score = 32.5 bits (74), Expect = 1.2
Identities = 6/19 (31%), Positives = 10/19 (52%)
Query: 256 FGTPEQLKYLVDECHKAGL 274
FG LV++ H+ G+
Sbjct: 104 FGNWTTFDTLVNDAHQNGI 122
Score = 32.5 bits (74), Expect = 1.2
Identities = 6/19 (31%), Positives = 10/19 (52%)
Query: 275 FGTPEQLKYLVDECHKAGL 293
FG LV++ H+ G+
Sbjct: 104 FGNWTTFDTLVNDAHQNGI 122
Score = 32.5 bits (74), Expect = 1.2
Identities = 6/19 (31%), Positives = 10/19 (52%)
Query: 294 FGTPEQLKYLVDECHKAGL 312
FG LV++ H+ G+
Sbjct: 104 FGNWTTFDTLVNDAHQNGI 122
Score = 32.5 bits (74), Expect = 1.2
Identities = 6/19 (31%), Positives = 10/19 (52%)
Query: 313 FGTPEQLKYLVDECHKAGL 331
FG LV++ H+ G+
Sbjct: 104 FGNWTTFDTLVNDAHQNGI 122
Score = 32.5 bits (74), Expect = 1.2
Identities = 6/19 (31%), Positives = 10/19 (52%)
Query: 332 FGTPEQLKYLVDECHKAGL 350
FG LV++ H+ G+
Sbjct: 104 FGNWTTFDTLVNDAHQNGI 122
Score = 32.5 bits (74), Expect = 1.2
Identities = 6/19 (31%), Positives = 10/19 (52%)
Query: 351 FGTPEQLKYLVDECHKAGL 369
FG LV++ H+ G+
Sbjct: 104 FGNWTTFDTLVNDAHQNGI 122
Score = 32.5 bits (74), Expect = 1.2
Identities = 6/19 (31%), Positives = 10/19 (52%)
Query: 370 FGTPEQLKYLVDECHKAGL 388
FG LV++ H+ G+
Sbjct: 104 FGNWTTFDTLVNDAHQNGI 122
Score = 32.5 bits (74), Expect = 1.2
Identities = 6/19 (31%), Positives = 10/19 (52%)
Query: 389 FGTPEQLKYLVDECHKAGL 407
FG LV++ H+ G+
Sbjct: 104 FGNWTTFDTLVNDAHQNGI 122
Score = 32.5 bits (74), Expect = 1.2
Identities = 6/19 (31%), Positives = 10/19 (52%)
Query: 408 FGTPEQLKYLVDECHKAGL 426
FG LV++ H+ G+
Sbjct: 104 FGNWTTFDTLVNDAHQNGI 122
Score = 32.5 bits (74), Expect = 1.2
Identities = 6/19 (31%), Positives = 10/19 (52%)
Query: 427 FGTPEQLKYLVDECHKAGL 445
FG LV++ H+ G+
Sbjct: 104 FGNWTTFDTLVNDAHQNGI 122
Score = 32.5 bits (74), Expect = 1.2
Identities = 6/19 (31%), Positives = 10/19 (52%)
Query: 446 FGTPEQLKYLVDECHKAGL 464
FG LV++ H+ G+
Sbjct: 104 FGNWTTFDTLVNDAHQNGI 122
Score = 32.5 bits (74), Expect = 1.2
Identities = 6/19 (31%), Positives = 10/19 (52%)
Query: 465 FGTPEQLKYLVDECHKAGL 483
FG LV++ H+ G+
Sbjct: 104 FGNWTTFDTLVNDAHQNGI 122
Score = 32.5 bits (74), Expect = 1.2
Identities = 6/19 (31%), Positives = 10/19 (52%)
Query: 484 FGTPEQLKYLVDECHKAGL 502
FG LV++ H+ G+
Sbjct: 104 FGNWTTFDTLVNDAHQNGI 122
Score = 32.5 bits (74), Expect = 1.2
Identities = 6/19 (31%), Positives = 10/19 (52%)
Query: 503 FGTPEQLKYLVDECHKAGL 521
FG LV++ H+ G+
Sbjct: 104 FGNWTTFDTLVNDAHQNGI 122
Score = 32.5 bits (74), Expect = 1.2
Identities = 6/19 (31%), Positives = 10/19 (52%)
Query: 522 FGTPEQLKYLVDECHKAGL 540
FG LV++ H+ G+
Sbjct: 104 FGNWTTFDTLVNDAHQNGI 122
Score = 32.5 bits (74), Expect = 1.2
Identities = 6/19 (31%), Positives = 10/19 (52%)
Query: 541 FGTPEQLKYLVDECHKAGL 559
FG LV++ H+ G+
Sbjct: 104 FGNWTTFDTLVNDAHQNGI 122
Score = 32.5 bits (74), Expect = 1.2
Identities = 6/19 (31%), Positives = 10/19 (52%)
Query: 560 FGTPEQLKYLVDECHKAGL 578
FG LV++ H+ G+
Sbjct: 104 FGNWTTFDTLVNDAHQNGI 122
Score = 32.5 bits (74), Expect = 1.2
Identities = 6/19 (31%), Positives = 10/19 (52%)
Query: 579 FGTPEQLKYLVDECHKAGL 597
FG LV++ H+ G+
Sbjct: 104 FGNWTTFDTLVNDAHQNGI 122
Score = 32.5 bits (74), Expect = 1.2
Identities = 6/19 (31%), Positives = 10/19 (52%)
Query: 598 FGTPEQLKYLVDECHKAGL 616
FG LV++ H+ G+
Sbjct: 104 FGNWTTFDTLVNDAHQNGI 122
Score = 32.5 bits (74), Expect = 1.2
Identities = 6/19 (31%), Positives = 10/19 (52%)
Query: 617 FGTPEQLKYLVDECHKAGL 635
FG LV++ H+ G+
Sbjct: 104 FGNWTTFDTLVNDAHQNGI 122
Score = 32.5 bits (74), Expect = 1.2
Identities = 6/19 (31%), Positives = 10/19 (52%)
Query: 636 FGTPEQLKYLVDECHKAGL 654
FG LV++ H+ G+
Sbjct: 104 FGNWTTFDTLVNDAHQNGI 122
Score = 32.5 bits (74), Expect = 1.2
Identities = 6/19 (31%), Positives = 10/19 (52%)
Query: 655 FGTPEQLKYLVDECHKAGL 673
FG LV++ H+ G+
Sbjct: 104 FGNWTTFDTLVNDAHQNGI 122
Score = 32.5 bits (74), Expect = 1.2
Identities = 6/19 (31%), Positives = 10/19 (52%)
Query: 674 FGTPEQLKYLVDECHKAGL 692
FG LV++ H+ G+
Sbjct: 104 FGNWTTFDTLVNDAHQNGI 122
Score = 32.5 bits (74), Expect = 1.2
Identities = 6/19 (31%), Positives = 10/19 (52%)
Query: 693 FGTPEQLKYLVDECHKAGL 711
FG LV++ H+ G+
Sbjct: 104 FGNWTTFDTLVNDAHQNGI 122
Score = 32.5 bits (74), Expect = 1.2
Identities = 6/19 (31%), Positives = 10/19 (52%)
Query: 712 FGTPEQLKYLVDECHKAGL 730
FG LV++ H+ G+
Sbjct: 104 FGNWTTFDTLVNDAHQNGI 122
Score = 32.5 bits (74), Expect = 1.2
Identities = 6/19 (31%), Positives = 10/19 (52%)
Query: 731 FGTPEQLKYLVDECHKAGL 749
FG LV++ H+ G+
Sbjct: 104 FGNWTTFDTLVNDAHQNGI 122
Score = 32.5 bits (74), Expect = 1.2
Identities = 6/19 (31%), Positives = 10/19 (52%)
Query: 750 FGTPEQLKYLVDECHKAGL 768
FG LV++ H+ G+
Sbjct: 104 FGNWTTFDTLVNDAHQNGI 122
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP}
SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Length = 583
Score = 62.4 bits (152), Expect = 6e-10
Identities = 33/131 (25%), Positives = 52/131 (39%), Gaps = 22/131 (16%)
Query: 1022 YLVDECHKAGLFGTPEQLKYLVDECHKAGLYVLLDVVHSHASKN---VLDGL-NEFDGTQ 1077
+ +D FG + LK LVD CH+ G+ VLLD V +H+ + +D L N
Sbjct: 209 FQIDP-----QFGDKDTLKKLVDLCHERGIRVLLDAVFNHSGRTFPPFVDVLKNGEKSKY 263
Query: 1078 ACFFHDGPRGTHPLWDSRL------------FNYSEIEVLRFLLSNLRWYLDEYQFDGFR 1125
+FH + N +V +LL +++ E DG+R
Sbjct: 264 KDWFHIRSLPLEVVDGIPTYDTFAFEPLMPKLNTEHPDVKEYLLKAAEYWIRETGIDGWR 323
Query: 1126 FDGVTSMLYHN 1136
D V + + H
Sbjct: 324 LD-VANEVSHQ 333
Score = 31.6 bits (72), Expect = 2.0
Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 9/37 (24%)
Query: 758 YLVDECHKAGLFGTPEQLKYLVDECHKAGLLCFMHVV 794
+ +D FG + LK LVD CH+ G + V+
Sbjct: 209 FQIDP-----QFGDKDTLKKLVDLCHERG----IRVL 236
Score = 29.6 bits (67), Expect = 7.3
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 5/30 (16%)
Query: 131 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 160
+ +D FG + LK LVD CH+ G+
Sbjct: 209 FQIDP-----QFGDKDTLKKLVDLCHERGI 233
Score = 29.6 bits (67), Expect = 7.3
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 5/30 (16%)
Query: 150 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 179
+ +D FG + LK LVD CH+ G+
Sbjct: 209 FQIDP-----QFGDKDTLKKLVDLCHERGI 233
Score = 29.6 bits (67), Expect = 7.3
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 5/30 (16%)
Query: 169 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 198
+ +D FG + LK LVD CH+ G+
Sbjct: 209 FQIDP-----QFGDKDTLKKLVDLCHERGI 233
Score = 29.6 bits (67), Expect = 7.3
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 5/30 (16%)
Query: 188 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 217
+ +D FG + LK LVD CH+ G+
Sbjct: 209 FQIDP-----QFGDKDTLKKLVDLCHERGI 233
Score = 29.6 bits (67), Expect = 7.3
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 5/30 (16%)
Query: 207 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 236
+ +D FG + LK LVD CH+ G+
Sbjct: 209 FQIDP-----QFGDKDTLKKLVDLCHERGI 233
Score = 29.6 bits (67), Expect = 7.3
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 5/30 (16%)
Query: 226 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 255
+ +D FG + LK LVD CH+ G+
Sbjct: 209 FQIDP-----QFGDKDTLKKLVDLCHERGI 233
Score = 29.6 bits (67), Expect = 7.3
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 5/30 (16%)
Query: 245 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 274
+ +D FG + LK LVD CH+ G+
Sbjct: 209 FQIDP-----QFGDKDTLKKLVDLCHERGI 233
Score = 29.6 bits (67), Expect = 7.3
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 5/30 (16%)
Query: 264 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 293
+ +D FG + LK LVD CH+ G+
Sbjct: 209 FQIDP-----QFGDKDTLKKLVDLCHERGI 233
Score = 29.6 bits (67), Expect = 7.3
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 5/30 (16%)
Query: 283 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 312
+ +D FG + LK LVD CH+ G+
Sbjct: 209 FQIDP-----QFGDKDTLKKLVDLCHERGI 233
Score = 29.6 bits (67), Expect = 7.3
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 5/30 (16%)
Query: 302 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 331
+ +D FG + LK LVD CH+ G+
Sbjct: 209 FQIDP-----QFGDKDTLKKLVDLCHERGI 233
Score = 29.6 bits (67), Expect = 7.3
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 5/30 (16%)
Query: 321 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 350
+ +D FG + LK LVD CH+ G+
Sbjct: 209 FQIDP-----QFGDKDTLKKLVDLCHERGI 233
Score = 29.6 bits (67), Expect = 7.3
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 5/30 (16%)
Query: 340 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 369
+ +D FG + LK LVD CH+ G+
Sbjct: 209 FQIDP-----QFGDKDTLKKLVDLCHERGI 233
Score = 29.6 bits (67), Expect = 7.3
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 5/30 (16%)
Query: 359 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 388
+ +D FG + LK LVD CH+ G+
Sbjct: 209 FQIDP-----QFGDKDTLKKLVDLCHERGI 233
Score = 29.6 bits (67), Expect = 7.3
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 5/30 (16%)
Query: 378 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 407
+ +D FG + LK LVD CH+ G+
Sbjct: 209 FQIDP-----QFGDKDTLKKLVDLCHERGI 233
Score = 29.6 bits (67), Expect = 7.3
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 5/30 (16%)
Query: 397 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 426
+ +D FG + LK LVD CH+ G+
Sbjct: 209 FQIDP-----QFGDKDTLKKLVDLCHERGI 233
Score = 29.6 bits (67), Expect = 7.3
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 5/30 (16%)
Query: 416 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 445
+ +D FG + LK LVD CH+ G+
Sbjct: 209 FQIDP-----QFGDKDTLKKLVDLCHERGI 233
Score = 29.6 bits (67), Expect = 7.3
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 5/30 (16%)
Query: 435 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 464
+ +D FG + LK LVD CH+ G+
Sbjct: 209 FQIDP-----QFGDKDTLKKLVDLCHERGI 233
Score = 29.6 bits (67), Expect = 7.3
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 5/30 (16%)
Query: 454 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 483
+ +D FG + LK LVD CH+ G+
Sbjct: 209 FQIDP-----QFGDKDTLKKLVDLCHERGI 233
Score = 29.6 bits (67), Expect = 7.3
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 5/30 (16%)
Query: 473 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 502
+ +D FG + LK LVD CH+ G+
Sbjct: 209 FQIDP-----QFGDKDTLKKLVDLCHERGI 233
Score = 29.6 bits (67), Expect = 7.3
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 5/30 (16%)
Query: 492 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 521
+ +D FG + LK LVD CH+ G+
Sbjct: 209 FQIDP-----QFGDKDTLKKLVDLCHERGI 233
Score = 29.6 bits (67), Expect = 7.3
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 5/30 (16%)
Query: 511 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 540
+ +D FG + LK LVD CH+ G+
Sbjct: 209 FQIDP-----QFGDKDTLKKLVDLCHERGI 233
Score = 29.6 bits (67), Expect = 7.3
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 5/30 (16%)
Query: 530 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 559
+ +D FG + LK LVD CH+ G+
Sbjct: 209 FQIDP-----QFGDKDTLKKLVDLCHERGI 233
Score = 29.6 bits (67), Expect = 7.3
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 5/30 (16%)
Query: 549 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 578
+ +D FG + LK LVD CH+ G+
Sbjct: 209 FQIDP-----QFGDKDTLKKLVDLCHERGI 233
Score = 29.6 bits (67), Expect = 7.3
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 5/30 (16%)
Query: 568 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 597
+ +D FG + LK LVD CH+ G+
Sbjct: 209 FQIDP-----QFGDKDTLKKLVDLCHERGI 233
Score = 29.6 bits (67), Expect = 7.3
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 5/30 (16%)
Query: 587 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 616
+ +D FG + LK LVD CH+ G+
Sbjct: 209 FQIDP-----QFGDKDTLKKLVDLCHERGI 233
Score = 29.6 bits (67), Expect = 7.3
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 5/30 (16%)
Query: 606 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 635
+ +D FG + LK LVD CH+ G+
Sbjct: 209 FQIDP-----QFGDKDTLKKLVDLCHERGI 233
Score = 29.6 bits (67), Expect = 7.3
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 5/30 (16%)
Query: 625 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 654
+ +D FG + LK LVD CH+ G+
Sbjct: 209 FQIDP-----QFGDKDTLKKLVDLCHERGI 233
Score = 29.6 bits (67), Expect = 7.3
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 5/30 (16%)
Query: 644 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 673
+ +D FG + LK LVD CH+ G+
Sbjct: 209 FQIDP-----QFGDKDTLKKLVDLCHERGI 233
Score = 29.6 bits (67), Expect = 7.3
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 5/30 (16%)
Query: 663 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 692
+ +D FG + LK LVD CH+ G+
Sbjct: 209 FQIDP-----QFGDKDTLKKLVDLCHERGI 233
Score = 29.6 bits (67), Expect = 7.3
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 5/30 (16%)
Query: 682 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 711
+ +D FG + LK LVD CH+ G+
Sbjct: 209 FQIDP-----QFGDKDTLKKLVDLCHERGI 233
Score = 29.6 bits (67), Expect = 7.3
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 5/30 (16%)
Query: 701 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 730
+ +D FG + LK LVD CH+ G+
Sbjct: 209 FQIDP-----QFGDKDTLKKLVDLCHERGI 233
Score = 29.6 bits (67), Expect = 7.3
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 5/30 (16%)
Query: 720 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 749
+ +D FG + LK LVD CH+ G+
Sbjct: 209 FQIDP-----QFGDKDTLKKLVDLCHERGI 233
Score = 29.6 bits (67), Expect = 7.3
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 5/30 (16%)
Query: 739 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 768
+ +D FG + LK LVD CH+ G+
Sbjct: 209 FQIDP-----QFGDKDTLKKLVDLCHERGI 233
Score = 29.6 bits (67), Expect = 7.5
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 123 FGTPEQLKYLVDECHKAGL 141
FG + LK LVD CH+ G+
Sbjct: 215 FGDKDTLKKLVDLCHERGI 233
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase;
2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2
b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A*
1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A*
1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A
Length = 585
Score = 61.6 bits (150), Expect = 1e-09
Identities = 30/120 (25%), Positives = 48/120 (40%), Gaps = 18/120 (15%)
Query: 1033 FGTPEQLKYLVDECHKAGLYVLLDVVHSHASKN---VLDGLNEFDGTQAC---FFHDGPR 1086
FG + LVDE H+ G+ ++LD V +HA D L + + ++ F D P
Sbjct: 216 FGDLPTFRRLVDEAHRRGIKIILDAVFNHAGDQFFAFRDVLQKGEQSRYKDWFFIEDFPV 275
Query: 1087 GTHPLWDSRLF----------NYSEIEVLRFLLSNLRWYLDEYQFDGFRFDGVTSMLYHN 1136
+ F EV +L R+++ E DG+R D V + + H
Sbjct: 276 SKTSRTNYETFAVQVPAMPKLRTENPEVKEYLFDVARFWM-EQGIDGWRLD-VANEVDHA 333
Score = 32.7 bits (75), Expect = 0.86
Identities = 13/53 (24%), Positives = 24/53 (45%), Gaps = 9/53 (16%)
Query: 769 FGTPEQLKYLVDECHKAGLLCFMHVVCAAGD--FNNWNREEFAYKKLDFGKWE 819
FG + LVDE H+ G + ++ D FN+ + FA++ + +
Sbjct: 216 FGDLPTFRRLVDEAHRRG----IKII---LDAVFNHAGDQFFAFRDVLQKGEQ 261
Score = 29.7 bits (67), Expect = 7.2
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 123 FGTPEQLKYLVDECHKAGL 141
FG + LVDE H+ G+
Sbjct: 216 FGDLPTFRRLVDEAHRRGI 234
Score = 29.7 bits (67), Expect = 7.2
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 142 FGTPEQLKYLVDECHKAGL 160
FG + LVDE H+ G+
Sbjct: 216 FGDLPTFRRLVDEAHRRGI 234
Score = 29.7 bits (67), Expect = 7.2
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 161 FGTPEQLKYLVDECHKAGL 179
FG + LVDE H+ G+
Sbjct: 216 FGDLPTFRRLVDEAHRRGI 234
Score = 29.7 bits (67), Expect = 7.2
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 180 FGTPEQLKYLVDECHKAGL 198
FG + LVDE H+ G+
Sbjct: 216 FGDLPTFRRLVDEAHRRGI 234
Score = 29.7 bits (67), Expect = 7.2
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 199 FGTPEQLKYLVDECHKAGL 217
FG + LVDE H+ G+
Sbjct: 216 FGDLPTFRRLVDEAHRRGI 234
Score = 29.7 bits (67), Expect = 7.2
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 218 FGTPEQLKYLVDECHKAGL 236
FG + LVDE H+ G+
Sbjct: 216 FGDLPTFRRLVDEAHRRGI 234
Score = 29.7 bits (67), Expect = 7.2
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 237 FGTPEQLKYLVDECHKAGL 255
FG + LVDE H+ G+
Sbjct: 216 FGDLPTFRRLVDEAHRRGI 234
Score = 29.7 bits (67), Expect = 7.2
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 256 FGTPEQLKYLVDECHKAGL 274
FG + LVDE H+ G+
Sbjct: 216 FGDLPTFRRLVDEAHRRGI 234
Score = 29.7 bits (67), Expect = 7.2
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 275 FGTPEQLKYLVDECHKAGL 293
FG + LVDE H+ G+
Sbjct: 216 FGDLPTFRRLVDEAHRRGI 234
Score = 29.7 bits (67), Expect = 7.2
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 294 FGTPEQLKYLVDECHKAGL 312
FG + LVDE H+ G+
Sbjct: 216 FGDLPTFRRLVDEAHRRGI 234
Score = 29.7 bits (67), Expect = 7.2
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 313 FGTPEQLKYLVDECHKAGL 331
FG + LVDE H+ G+
Sbjct: 216 FGDLPTFRRLVDEAHRRGI 234
Score = 29.7 bits (67), Expect = 7.2
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 332 FGTPEQLKYLVDECHKAGL 350
FG + LVDE H+ G+
Sbjct: 216 FGDLPTFRRLVDEAHRRGI 234
Score = 29.7 bits (67), Expect = 7.2
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 351 FGTPEQLKYLVDECHKAGL 369
FG + LVDE H+ G+
Sbjct: 216 FGDLPTFRRLVDEAHRRGI 234
Score = 29.7 bits (67), Expect = 7.2
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 370 FGTPEQLKYLVDECHKAGL 388
FG + LVDE H+ G+
Sbjct: 216 FGDLPTFRRLVDEAHRRGI 234
Score = 29.7 bits (67), Expect = 7.2
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 389 FGTPEQLKYLVDECHKAGL 407
FG + LVDE H+ G+
Sbjct: 216 FGDLPTFRRLVDEAHRRGI 234
Score = 29.7 bits (67), Expect = 7.2
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 408 FGTPEQLKYLVDECHKAGL 426
FG + LVDE H+ G+
Sbjct: 216 FGDLPTFRRLVDEAHRRGI 234
Score = 29.7 bits (67), Expect = 7.2
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 427 FGTPEQLKYLVDECHKAGL 445
FG + LVDE H+ G+
Sbjct: 216 FGDLPTFRRLVDEAHRRGI 234
Score = 29.7 bits (67), Expect = 7.2
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 446 FGTPEQLKYLVDECHKAGL 464
FG + LVDE H+ G+
Sbjct: 216 FGDLPTFRRLVDEAHRRGI 234
Score = 29.7 bits (67), Expect = 7.2
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 465 FGTPEQLKYLVDECHKAGL 483
FG + LVDE H+ G+
Sbjct: 216 FGDLPTFRRLVDEAHRRGI 234
Score = 29.7 bits (67), Expect = 7.2
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 484 FGTPEQLKYLVDECHKAGL 502
FG + LVDE H+ G+
Sbjct: 216 FGDLPTFRRLVDEAHRRGI 234
Score = 29.7 bits (67), Expect = 7.2
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 503 FGTPEQLKYLVDECHKAGL 521
FG + LVDE H+ G+
Sbjct: 216 FGDLPTFRRLVDEAHRRGI 234
Score = 29.7 bits (67), Expect = 7.2
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 522 FGTPEQLKYLVDECHKAGL 540
FG + LVDE H+ G+
Sbjct: 216 FGDLPTFRRLVDEAHRRGI 234
Score = 29.7 bits (67), Expect = 7.2
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 541 FGTPEQLKYLVDECHKAGL 559
FG + LVDE H+ G+
Sbjct: 216 FGDLPTFRRLVDEAHRRGI 234
Score = 29.7 bits (67), Expect = 7.2
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 560 FGTPEQLKYLVDECHKAGL 578
FG + LVDE H+ G+
Sbjct: 216 FGDLPTFRRLVDEAHRRGI 234
Score = 29.7 bits (67), Expect = 7.2
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 579 FGTPEQLKYLVDECHKAGL 597
FG + LVDE H+ G+
Sbjct: 216 FGDLPTFRRLVDEAHRRGI 234
Score = 29.7 bits (67), Expect = 7.2
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 598 FGTPEQLKYLVDECHKAGL 616
FG + LVDE H+ G+
Sbjct: 216 FGDLPTFRRLVDEAHRRGI 234
Score = 29.7 bits (67), Expect = 7.2
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 617 FGTPEQLKYLVDECHKAGL 635
FG + LVDE H+ G+
Sbjct: 216 FGDLPTFRRLVDEAHRRGI 234
Score = 29.7 bits (67), Expect = 7.2
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 636 FGTPEQLKYLVDECHKAGL 654
FG + LVDE H+ G+
Sbjct: 216 FGDLPTFRRLVDEAHRRGI 234
Score = 29.7 bits (67), Expect = 7.2
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 655 FGTPEQLKYLVDECHKAGL 673
FG + LVDE H+ G+
Sbjct: 216 FGDLPTFRRLVDEAHRRGI 234
Score = 29.7 bits (67), Expect = 7.2
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 674 FGTPEQLKYLVDECHKAGL 692
FG + LVDE H+ G+
Sbjct: 216 FGDLPTFRRLVDEAHRRGI 234
Score = 29.7 bits (67), Expect = 7.2
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 693 FGTPEQLKYLVDECHKAGL 711
FG + LVDE H+ G+
Sbjct: 216 FGDLPTFRRLVDEAHRRGI 234
Score = 29.7 bits (67), Expect = 7.2
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 712 FGTPEQLKYLVDECHKAGL 730
FG + LVDE H+ G+
Sbjct: 216 FGDLPTFRRLVDEAHRRGI 234
Score = 29.7 bits (67), Expect = 7.2
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 731 FGTPEQLKYLVDECHKAGL 749
FG + LVDE H+ G+
Sbjct: 216 FGDLPTFRRLVDEAHRRGI 234
Score = 29.7 bits (67), Expect = 7.2
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 750 FGTPEQLKYLVDECHKAGL 768
FG + LVDE H+ G+
Sbjct: 216 FGDLPTFRRLVDEAHRRGI 234
>3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex,
glycosidase, hydrolase; HET: CE6 ACX; 1.65A
{Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A*
1h3g_A
Length = 601
Score = 61.4 bits (149), Expect = 1e-09
Identities = 25/128 (19%), Positives = 42/128 (32%), Gaps = 27/128 (21%)
Query: 1022 YLVDECHKAGLFGTPEQLKYLVDECHKAGLYVLLDVVHSHAS------KNVL--DGLNEF 1073
Y +D +G+ E L E K G+ ++ DVV SH K++ D +N
Sbjct: 189 YRIDP-----RYGSNEDFVRLSTEARKRGMGLIQDVVLSHIGKHHWWMKDLPTPDWINYG 243
Query: 1074 DGTQACFFHDGPRGTHPLWDSRLFNY--------------SEIEVLRFLLSNLRWYLDEY 1119
H + N+ + V +L+ N W+++
Sbjct: 244 GKFVPTQHHRVAVQDPYAAQADSENFTKGWFVEGMPDLNQTNPLVANYLIQNNIWWIEYA 303
Query: 1120 QFDGFRFD 1127
G R D
Sbjct: 304 GLSGLRID 311
Score = 35.2 bits (81), Expect = 0.15
Identities = 13/61 (21%), Positives = 21/61 (34%), Gaps = 10/61 (16%)
Query: 758 YLVDECHKAGLFGTPEQLKYLVDECHKAGLLCFMHVVCAAGDFNNWNREEFAYKKLDFGK 817
Y +D +G+ E L E K G+ VV ++ + + K L
Sbjct: 189 YRIDP-----RYGSNEDFVRLSTEARKRGMGLIQDVV-----LSHIGKHHWWMKDLPTPD 238
Query: 818 W 818
W
Sbjct: 239 W 239
Score = 29.8 bits (67), Expect = 7.6
Identities = 8/30 (26%), Positives = 12/30 (40%), Gaps = 5/30 (16%)
Query: 131 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 160
Y +D +G+ E L E K G+
Sbjct: 189 YRIDP-----RYGSNEDFVRLSTEARKRGM 213
Score = 29.8 bits (67), Expect = 7.6
Identities = 8/30 (26%), Positives = 12/30 (40%), Gaps = 5/30 (16%)
Query: 150 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 179
Y +D +G+ E L E K G+
Sbjct: 189 YRIDP-----RYGSNEDFVRLSTEARKRGM 213
Score = 29.8 bits (67), Expect = 7.6
Identities = 8/30 (26%), Positives = 12/30 (40%), Gaps = 5/30 (16%)
Query: 169 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 198
Y +D +G+ E L E K G+
Sbjct: 189 YRIDP-----RYGSNEDFVRLSTEARKRGM 213
Score = 29.8 bits (67), Expect = 7.6
Identities = 8/30 (26%), Positives = 12/30 (40%), Gaps = 5/30 (16%)
Query: 188 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 217
Y +D +G+ E L E K G+
Sbjct: 189 YRIDP-----RYGSNEDFVRLSTEARKRGM 213
Score = 29.8 bits (67), Expect = 7.6
Identities = 8/30 (26%), Positives = 12/30 (40%), Gaps = 5/30 (16%)
Query: 207 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 236
Y +D +G+ E L E K G+
Sbjct: 189 YRIDP-----RYGSNEDFVRLSTEARKRGM 213
Score = 29.8 bits (67), Expect = 7.6
Identities = 8/30 (26%), Positives = 12/30 (40%), Gaps = 5/30 (16%)
Query: 226 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 255
Y +D +G+ E L E K G+
Sbjct: 189 YRIDP-----RYGSNEDFVRLSTEARKRGM 213
Score = 29.8 bits (67), Expect = 7.6
Identities = 8/30 (26%), Positives = 12/30 (40%), Gaps = 5/30 (16%)
Query: 245 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 274
Y +D +G+ E L E K G+
Sbjct: 189 YRIDP-----RYGSNEDFVRLSTEARKRGM 213
Score = 29.8 bits (67), Expect = 7.6
Identities = 8/30 (26%), Positives = 12/30 (40%), Gaps = 5/30 (16%)
Query: 264 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 293
Y +D +G+ E L E K G+
Sbjct: 189 YRIDP-----RYGSNEDFVRLSTEARKRGM 213
Score = 29.8 bits (67), Expect = 7.6
Identities = 8/30 (26%), Positives = 12/30 (40%), Gaps = 5/30 (16%)
Query: 283 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 312
Y +D +G+ E L E K G+
Sbjct: 189 YRIDP-----RYGSNEDFVRLSTEARKRGM 213
Score = 29.8 bits (67), Expect = 7.6
Identities = 8/30 (26%), Positives = 12/30 (40%), Gaps = 5/30 (16%)
Query: 302 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 331
Y +D +G+ E L E K G+
Sbjct: 189 YRIDP-----RYGSNEDFVRLSTEARKRGM 213
Score = 29.8 bits (67), Expect = 7.6
Identities = 8/30 (26%), Positives = 12/30 (40%), Gaps = 5/30 (16%)
Query: 321 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 350
Y +D +G+ E L E K G+
Sbjct: 189 YRIDP-----RYGSNEDFVRLSTEARKRGM 213
Score = 29.8 bits (67), Expect = 7.6
Identities = 8/30 (26%), Positives = 12/30 (40%), Gaps = 5/30 (16%)
Query: 340 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 369
Y +D +G+ E L E K G+
Sbjct: 189 YRIDP-----RYGSNEDFVRLSTEARKRGM 213
Score = 29.8 bits (67), Expect = 7.6
Identities = 8/30 (26%), Positives = 12/30 (40%), Gaps = 5/30 (16%)
Query: 359 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 388
Y +D +G+ E L E K G+
Sbjct: 189 YRIDP-----RYGSNEDFVRLSTEARKRGM 213
Score = 29.8 bits (67), Expect = 7.6
Identities = 8/30 (26%), Positives = 12/30 (40%), Gaps = 5/30 (16%)
Query: 378 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 407
Y +D +G+ E L E K G+
Sbjct: 189 YRIDP-----RYGSNEDFVRLSTEARKRGM 213
Score = 29.8 bits (67), Expect = 7.6
Identities = 8/30 (26%), Positives = 12/30 (40%), Gaps = 5/30 (16%)
Query: 397 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 426
Y +D +G+ E L E K G+
Sbjct: 189 YRIDP-----RYGSNEDFVRLSTEARKRGM 213
Score = 29.8 bits (67), Expect = 7.6
Identities = 8/30 (26%), Positives = 12/30 (40%), Gaps = 5/30 (16%)
Query: 416 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 445
Y +D +G+ E L E K G+
Sbjct: 189 YRIDP-----RYGSNEDFVRLSTEARKRGM 213
Score = 29.8 bits (67), Expect = 7.6
Identities = 8/30 (26%), Positives = 12/30 (40%), Gaps = 5/30 (16%)
Query: 435 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 464
Y +D +G+ E L E K G+
Sbjct: 189 YRIDP-----RYGSNEDFVRLSTEARKRGM 213
Score = 29.8 bits (67), Expect = 7.6
Identities = 8/30 (26%), Positives = 12/30 (40%), Gaps = 5/30 (16%)
Query: 454 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 483
Y +D +G+ E L E K G+
Sbjct: 189 YRIDP-----RYGSNEDFVRLSTEARKRGM 213
Score = 29.8 bits (67), Expect = 7.6
Identities = 8/30 (26%), Positives = 12/30 (40%), Gaps = 5/30 (16%)
Query: 473 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 502
Y +D +G+ E L E K G+
Sbjct: 189 YRIDP-----RYGSNEDFVRLSTEARKRGM 213
Score = 29.8 bits (67), Expect = 7.6
Identities = 8/30 (26%), Positives = 12/30 (40%), Gaps = 5/30 (16%)
Query: 492 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 521
Y +D +G+ E L E K G+
Sbjct: 189 YRIDP-----RYGSNEDFVRLSTEARKRGM 213
Score = 29.8 bits (67), Expect = 7.6
Identities = 8/30 (26%), Positives = 12/30 (40%), Gaps = 5/30 (16%)
Query: 511 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 540
Y +D +G+ E L E K G+
Sbjct: 189 YRIDP-----RYGSNEDFVRLSTEARKRGM 213
Score = 29.8 bits (67), Expect = 7.6
Identities = 8/30 (26%), Positives = 12/30 (40%), Gaps = 5/30 (16%)
Query: 530 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 559
Y +D +G+ E L E K G+
Sbjct: 189 YRIDP-----RYGSNEDFVRLSTEARKRGM 213
Score = 29.8 bits (67), Expect = 7.6
Identities = 8/30 (26%), Positives = 12/30 (40%), Gaps = 5/30 (16%)
Query: 549 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 578
Y +D +G+ E L E K G+
Sbjct: 189 YRIDP-----RYGSNEDFVRLSTEARKRGM 213
Score = 29.8 bits (67), Expect = 7.6
Identities = 8/30 (26%), Positives = 12/30 (40%), Gaps = 5/30 (16%)
Query: 568 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 597
Y +D +G+ E L E K G+
Sbjct: 189 YRIDP-----RYGSNEDFVRLSTEARKRGM 213
Score = 29.8 bits (67), Expect = 7.6
Identities = 8/30 (26%), Positives = 12/30 (40%), Gaps = 5/30 (16%)
Query: 587 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 616
Y +D +G+ E L E K G+
Sbjct: 189 YRIDP-----RYGSNEDFVRLSTEARKRGM 213
Score = 29.8 bits (67), Expect = 7.6
Identities = 8/30 (26%), Positives = 12/30 (40%), Gaps = 5/30 (16%)
Query: 606 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 635
Y +D +G+ E L E K G+
Sbjct: 189 YRIDP-----RYGSNEDFVRLSTEARKRGM 213
Score = 29.8 bits (67), Expect = 7.6
Identities = 8/30 (26%), Positives = 12/30 (40%), Gaps = 5/30 (16%)
Query: 625 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 654
Y +D +G+ E L E K G+
Sbjct: 189 YRIDP-----RYGSNEDFVRLSTEARKRGM 213
Score = 29.8 bits (67), Expect = 7.6
Identities = 8/30 (26%), Positives = 12/30 (40%), Gaps = 5/30 (16%)
Query: 644 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 673
Y +D +G+ E L E K G+
Sbjct: 189 YRIDP-----RYGSNEDFVRLSTEARKRGM 213
Score = 29.8 bits (67), Expect = 7.6
Identities = 8/30 (26%), Positives = 12/30 (40%), Gaps = 5/30 (16%)
Query: 663 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 692
Y +D +G+ E L E K G+
Sbjct: 189 YRIDP-----RYGSNEDFVRLSTEARKRGM 213
Score = 29.8 bits (67), Expect = 7.6
Identities = 8/30 (26%), Positives = 12/30 (40%), Gaps = 5/30 (16%)
Query: 682 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 711
Y +D +G+ E L E K G+
Sbjct: 189 YRIDP-----RYGSNEDFVRLSTEARKRGM 213
Score = 29.8 bits (67), Expect = 7.6
Identities = 8/30 (26%), Positives = 12/30 (40%), Gaps = 5/30 (16%)
Query: 701 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 730
Y +D +G+ E L E K G+
Sbjct: 189 YRIDP-----RYGSNEDFVRLSTEARKRGM 213
Score = 29.8 bits (67), Expect = 7.6
Identities = 8/30 (26%), Positives = 12/30 (40%), Gaps = 5/30 (16%)
Query: 720 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 749
Y +D +G+ E L E K G+
Sbjct: 189 YRIDP-----RYGSNEDFVRLSTEARKRGM 213
Score = 29.8 bits (67), Expect = 7.6
Identities = 8/30 (26%), Positives = 12/30 (40%), Gaps = 5/30 (16%)
Query: 739 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 768
Y +D +G+ E L E K G+
Sbjct: 189 YRIDP-----RYGSNEDFVRLSTEARKRGM 213
Score = 29.4 bits (66), Expect = 8.3
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 123 FGTPEQLKYLVDECHKAGL 141
+G+ E L E K G+
Sbjct: 195 YGSNEDFVRLSTEARKRGM 213
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes,
hydrolase, glycosidase, neopullu; 2.37A {Nostoc
punctiforme} PDB: 2wcs_A 2wkg_A
Length = 488
Score = 60.4 bits (147), Expect = 2e-09
Identities = 29/124 (23%), Positives = 47/124 (37%), Gaps = 24/124 (19%)
Query: 1022 YLVDECHKAGLFGTPEQLKYLVDECHKAGLYVLLDVVHSHASKN---VLDGL-NEFDGTQ 1077
Y VD + G E K L+D H+ + V+LD V +H+S+ D L N
Sbjct: 93 YQVDP-----MLGGNEAFKELLDAAHQRNIKVVLDGVFNHSSRGFFFFHDVLENGPHSPW 147
Query: 1078 ACFFHDGPRGTHPLWDSRL--------------FNYSEIEVLRFLLSNLRWYLDEYQFDG 1123
+F P FN+ EV +++ ++L ++ DG
Sbjct: 148 VNWFKIEGWPLSPYNGEFPANYVGWAGNRALPEFNHDNPEVREYIMEIAEYWL-KFGIDG 206
Query: 1124 FRFD 1127
+R D
Sbjct: 207 WRLD 210
Score = 33.5 bits (77), Expect = 0.51
Identities = 16/64 (25%), Positives = 24/64 (37%), Gaps = 14/64 (21%)
Query: 758 YLVDECHKAGLFGTPEQLKYLVDECHKAGLLCFMHVVCAAGD--FNNWNREEFAYKKLDF 815
Y VD + G E K L+D H+ + VV D FN+ +R F + +
Sbjct: 93 YQVDP-----MLGGNEAFKELLDAAHQRN----IKVV---LDGVFNHSSRGFFFFHDVLE 140
Query: 816 GKWE 819
Sbjct: 141 NGPH 144
Score = 30.8 bits (70), Expect = 3.4
Identities = 9/30 (30%), Positives = 13/30 (43%), Gaps = 5/30 (16%)
Query: 131 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 160
Y VD + G E K L+D H+ +
Sbjct: 93 YQVDP-----MLGGNEAFKELLDAAHQRNI 117
Score = 30.8 bits (70), Expect = 3.4
Identities = 9/30 (30%), Positives = 13/30 (43%), Gaps = 5/30 (16%)
Query: 150 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 179
Y VD + G E K L+D H+ +
Sbjct: 93 YQVDP-----MLGGNEAFKELLDAAHQRNI 117
Score = 30.8 bits (70), Expect = 3.4
Identities = 9/30 (30%), Positives = 13/30 (43%), Gaps = 5/30 (16%)
Query: 169 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 198
Y VD + G E K L+D H+ +
Sbjct: 93 YQVDP-----MLGGNEAFKELLDAAHQRNI 117
Score = 30.8 bits (70), Expect = 3.4
Identities = 9/30 (30%), Positives = 13/30 (43%), Gaps = 5/30 (16%)
Query: 188 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 217
Y VD + G E K L+D H+ +
Sbjct: 93 YQVDP-----MLGGNEAFKELLDAAHQRNI 117
Score = 30.8 bits (70), Expect = 3.4
Identities = 9/30 (30%), Positives = 13/30 (43%), Gaps = 5/30 (16%)
Query: 207 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 236
Y VD + G E K L+D H+ +
Sbjct: 93 YQVDP-----MLGGNEAFKELLDAAHQRNI 117
Score = 30.8 bits (70), Expect = 3.4
Identities = 9/30 (30%), Positives = 13/30 (43%), Gaps = 5/30 (16%)
Query: 226 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 255
Y VD + G E K L+D H+ +
Sbjct: 93 YQVDP-----MLGGNEAFKELLDAAHQRNI 117
Score = 30.8 bits (70), Expect = 3.4
Identities = 9/30 (30%), Positives = 13/30 (43%), Gaps = 5/30 (16%)
Query: 245 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 274
Y VD + G E K L+D H+ +
Sbjct: 93 YQVDP-----MLGGNEAFKELLDAAHQRNI 117
Score = 30.8 bits (70), Expect = 3.4
Identities = 9/30 (30%), Positives = 13/30 (43%), Gaps = 5/30 (16%)
Query: 264 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 293
Y VD + G E K L+D H+ +
Sbjct: 93 YQVDP-----MLGGNEAFKELLDAAHQRNI 117
Score = 30.8 bits (70), Expect = 3.4
Identities = 9/30 (30%), Positives = 13/30 (43%), Gaps = 5/30 (16%)
Query: 283 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 312
Y VD + G E K L+D H+ +
Sbjct: 93 YQVDP-----MLGGNEAFKELLDAAHQRNI 117
Score = 30.8 bits (70), Expect = 3.4
Identities = 9/30 (30%), Positives = 13/30 (43%), Gaps = 5/30 (16%)
Query: 302 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 331
Y VD + G E K L+D H+ +
Sbjct: 93 YQVDP-----MLGGNEAFKELLDAAHQRNI 117
Score = 30.8 bits (70), Expect = 3.4
Identities = 9/30 (30%), Positives = 13/30 (43%), Gaps = 5/30 (16%)
Query: 321 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 350
Y VD + G E K L+D H+ +
Sbjct: 93 YQVDP-----MLGGNEAFKELLDAAHQRNI 117
Score = 30.8 bits (70), Expect = 3.4
Identities = 9/30 (30%), Positives = 13/30 (43%), Gaps = 5/30 (16%)
Query: 340 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 369
Y VD + G E K L+D H+ +
Sbjct: 93 YQVDP-----MLGGNEAFKELLDAAHQRNI 117
Score = 30.8 bits (70), Expect = 3.4
Identities = 9/30 (30%), Positives = 13/30 (43%), Gaps = 5/30 (16%)
Query: 359 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 388
Y VD + G E K L+D H+ +
Sbjct: 93 YQVDP-----MLGGNEAFKELLDAAHQRNI 117
Score = 30.8 bits (70), Expect = 3.4
Identities = 9/30 (30%), Positives = 13/30 (43%), Gaps = 5/30 (16%)
Query: 378 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 407
Y VD + G E K L+D H+ +
Sbjct: 93 YQVDP-----MLGGNEAFKELLDAAHQRNI 117
Score = 30.8 bits (70), Expect = 3.4
Identities = 9/30 (30%), Positives = 13/30 (43%), Gaps = 5/30 (16%)
Query: 397 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 426
Y VD + G E K L+D H+ +
Sbjct: 93 YQVDP-----MLGGNEAFKELLDAAHQRNI 117
Score = 30.8 bits (70), Expect = 3.4
Identities = 9/30 (30%), Positives = 13/30 (43%), Gaps = 5/30 (16%)
Query: 416 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 445
Y VD + G E K L+D H+ +
Sbjct: 93 YQVDP-----MLGGNEAFKELLDAAHQRNI 117
Score = 30.8 bits (70), Expect = 3.4
Identities = 9/30 (30%), Positives = 13/30 (43%), Gaps = 5/30 (16%)
Query: 435 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 464
Y VD + G E K L+D H+ +
Sbjct: 93 YQVDP-----MLGGNEAFKELLDAAHQRNI 117
Score = 30.8 bits (70), Expect = 3.4
Identities = 9/30 (30%), Positives = 13/30 (43%), Gaps = 5/30 (16%)
Query: 454 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 483
Y VD + G E K L+D H+ +
Sbjct: 93 YQVDP-----MLGGNEAFKELLDAAHQRNI 117
Score = 30.8 bits (70), Expect = 3.4
Identities = 9/30 (30%), Positives = 13/30 (43%), Gaps = 5/30 (16%)
Query: 473 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 502
Y VD + G E K L+D H+ +
Sbjct: 93 YQVDP-----MLGGNEAFKELLDAAHQRNI 117
Score = 30.8 bits (70), Expect = 3.4
Identities = 9/30 (30%), Positives = 13/30 (43%), Gaps = 5/30 (16%)
Query: 492 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 521
Y VD + G E K L+D H+ +
Sbjct: 93 YQVDP-----MLGGNEAFKELLDAAHQRNI 117
Score = 30.8 bits (70), Expect = 3.4
Identities = 9/30 (30%), Positives = 13/30 (43%), Gaps = 5/30 (16%)
Query: 511 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 540
Y VD + G E K L+D H+ +
Sbjct: 93 YQVDP-----MLGGNEAFKELLDAAHQRNI 117
Score = 30.8 bits (70), Expect = 3.4
Identities = 9/30 (30%), Positives = 13/30 (43%), Gaps = 5/30 (16%)
Query: 530 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 559
Y VD + G E K L+D H+ +
Sbjct: 93 YQVDP-----MLGGNEAFKELLDAAHQRNI 117
Score = 30.8 bits (70), Expect = 3.4
Identities = 9/30 (30%), Positives = 13/30 (43%), Gaps = 5/30 (16%)
Query: 549 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 578
Y VD + G E K L+D H+ +
Sbjct: 93 YQVDP-----MLGGNEAFKELLDAAHQRNI 117
Score = 30.8 bits (70), Expect = 3.4
Identities = 9/30 (30%), Positives = 13/30 (43%), Gaps = 5/30 (16%)
Query: 568 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 597
Y VD + G E K L+D H+ +
Sbjct: 93 YQVDP-----MLGGNEAFKELLDAAHQRNI 117
Score = 30.8 bits (70), Expect = 3.4
Identities = 9/30 (30%), Positives = 13/30 (43%), Gaps = 5/30 (16%)
Query: 587 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 616
Y VD + G E K L+D H+ +
Sbjct: 93 YQVDP-----MLGGNEAFKELLDAAHQRNI 117
Score = 30.8 bits (70), Expect = 3.4
Identities = 9/30 (30%), Positives = 13/30 (43%), Gaps = 5/30 (16%)
Query: 606 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 635
Y VD + G E K L+D H+ +
Sbjct: 93 YQVDP-----MLGGNEAFKELLDAAHQRNI 117
Score = 30.8 bits (70), Expect = 3.4
Identities = 9/30 (30%), Positives = 13/30 (43%), Gaps = 5/30 (16%)
Query: 625 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 654
Y VD + G E K L+D H+ +
Sbjct: 93 YQVDP-----MLGGNEAFKELLDAAHQRNI 117
Score = 30.8 bits (70), Expect = 3.4
Identities = 9/30 (30%), Positives = 13/30 (43%), Gaps = 5/30 (16%)
Query: 644 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 673
Y VD + G E K L+D H+ +
Sbjct: 93 YQVDP-----MLGGNEAFKELLDAAHQRNI 117
Score = 30.8 bits (70), Expect = 3.4
Identities = 9/30 (30%), Positives = 13/30 (43%), Gaps = 5/30 (16%)
Query: 663 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 692
Y VD + G E K L+D H+ +
Sbjct: 93 YQVDP-----MLGGNEAFKELLDAAHQRNI 117
Score = 30.8 bits (70), Expect = 3.4
Identities = 9/30 (30%), Positives = 13/30 (43%), Gaps = 5/30 (16%)
Query: 682 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 711
Y VD + G E K L+D H+ +
Sbjct: 93 YQVDP-----MLGGNEAFKELLDAAHQRNI 117
Score = 30.8 bits (70), Expect = 3.4
Identities = 9/30 (30%), Positives = 13/30 (43%), Gaps = 5/30 (16%)
Query: 701 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 730
Y VD + G E K L+D H+ +
Sbjct: 93 YQVDP-----MLGGNEAFKELLDAAHQRNI 117
Score = 30.8 bits (70), Expect = 3.4
Identities = 9/30 (30%), Positives = 13/30 (43%), Gaps = 5/30 (16%)
Query: 720 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 749
Y VD + G E K L+D H+ +
Sbjct: 93 YQVDP-----MLGGNEAFKELLDAAHQRNI 117
Score = 30.8 bits (70), Expect = 3.4
Identities = 9/30 (30%), Positives = 13/30 (43%), Gaps = 5/30 (16%)
Query: 739 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 768
Y VD + G E K L+D H+ +
Sbjct: 93 YQVDP-----MLGGNEAFKELLDAAHQRNI 117
Score = 30.4 bits (69), Expect = 4.3
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 123 FGTPEQLKYLVDECHKAGL 141
G E K L+D H+ +
Sbjct: 99 LGGNEAFKELLDAAHQRNI 117
>1bf2_A Isoamylase; hydrolase, glycosidase, debranching enzyme; 2.00A
{Pseudomonas amyloderamosa} SCOP: b.1.18.2 b.71.1.1
c.1.8.1
Length = 750
Score = 59.3 bits (144), Expect = 7e-09
Identities = 20/106 (18%), Positives = 38/106 (35%), Gaps = 22/106 (20%)
Query: 1039 LKYLVDECHKAGLYVLLDVVHSH-ASKNVLDGLNEFDGTQACFFHDGPRG-------THP 1090
+ +V H AG+ V +DVV++H A + T + RG
Sbjct: 275 FQAMVQAFHNAGIKVYMDVVYNHTAEGGTWTSSDPTTATIYSW-----RGLDNATYYELT 329
Query: 1091 LWDSRLFNYS---------EIEVLRFLLSNLRWYLDEYQFDGFRFD 1127
+ ++ + ++ +L ++ + DGFRFD
Sbjct: 330 SGNQYFYDNTGIGANFNTYNTVAQNLIVDSLAYWANTMGVDGFRFD 375
Score = 29.3 bits (66), Expect = 9.8
Identities = 19/107 (17%), Positives = 32/107 (29%), Gaps = 28/107 (26%)
Query: 823 PPNPDGSCKLTHLSQVKLVVRNQHGH-------LLDRLSPWATYVTEPPVVGHAYEQRIW 875
P P S + + +G LLD P+A V++ P+ ++
Sbjct: 84 PNWPYASNWGKGSQAGFVSDVDANGDRFNPNKLLLD---PYAQEVSQDPLNPSNQNGNVF 140
Query: 876 NPKPQ-----------------DKHKWTSSKPKKP-DNLKIYESHVG 904
+ T +KP + + IYE HV
Sbjct: 141 ASGASYRTTDSGIYAPKGVVLVPSTQSTGTKPTRAQKDDVIYEVHVR 187
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national
project on structural and functional analyses; HET: GLC;
2.30A {Thermus thermophilus}
Length = 475
Score = 58.1 bits (141), Expect = 1e-08
Identities = 22/122 (18%), Positives = 44/122 (36%), Gaps = 22/122 (18%)
Query: 1022 YLVDECHKAGLFGTPEQLKYLVDECHKAGLYVLLDVVHSHASKN---VLDGL-NEFDGTQ 1077
+ VD + G E L++L++ H G+ V+LD V +H + + N
Sbjct: 87 FQVDP-----ILGGNEALRHLLEVAHAHGVRVILDGVFNHTGRGFFAFQHLMENGEQSPY 141
Query: 1078 ACFFH---DGPRGTHPLWDSRLF---------NYSEIEVLRFLLSNLRWYLDEYQFDGFR 1125
++H + + + V +LL+ ++ + DG+R
Sbjct: 142 RDWYHVKGFPLKAYTAHPNYEAWWGNPELPKLKVETPAVREYLLAVAEHWI-RFGVDGWR 200
Query: 1126 FD 1127
D
Sbjct: 201 LD 202
Score = 32.3 bits (74), Expect = 1.2
Identities = 9/37 (24%), Positives = 17/37 (45%), Gaps = 9/37 (24%)
Query: 758 YLVDECHKAGLFGTPEQLKYLVDECHKAGLLCFMHVV 794
+ VD + G E L++L++ H G + V+
Sbjct: 87 FQVDP-----ILGGNEALRHLLEVAHAHG----VRVI 114
Score = 30.4 bits (69), Expect = 4.5
Identities = 8/30 (26%), Positives = 15/30 (50%), Gaps = 5/30 (16%)
Query: 131 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 160
+ VD + G E L++L++ H G+
Sbjct: 87 FQVDP-----ILGGNEALRHLLEVAHAHGV 111
Score = 30.4 bits (69), Expect = 4.5
Identities = 8/30 (26%), Positives = 15/30 (50%), Gaps = 5/30 (16%)
Query: 150 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 179
+ VD + G E L++L++ H G+
Sbjct: 87 FQVDP-----ILGGNEALRHLLEVAHAHGV 111
Score = 30.4 bits (69), Expect = 4.5
Identities = 8/30 (26%), Positives = 15/30 (50%), Gaps = 5/30 (16%)
Query: 169 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 198
+ VD + G E L++L++ H G+
Sbjct: 87 FQVDP-----ILGGNEALRHLLEVAHAHGV 111
Score = 30.4 bits (69), Expect = 4.5
Identities = 8/30 (26%), Positives = 15/30 (50%), Gaps = 5/30 (16%)
Query: 188 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 217
+ VD + G E L++L++ H G+
Sbjct: 87 FQVDP-----ILGGNEALRHLLEVAHAHGV 111
Score = 30.4 bits (69), Expect = 4.5
Identities = 8/30 (26%), Positives = 15/30 (50%), Gaps = 5/30 (16%)
Query: 207 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 236
+ VD + G E L++L++ H G+
Sbjct: 87 FQVDP-----ILGGNEALRHLLEVAHAHGV 111
Score = 30.4 bits (69), Expect = 4.5
Identities = 8/30 (26%), Positives = 15/30 (50%), Gaps = 5/30 (16%)
Query: 226 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 255
+ VD + G E L++L++ H G+
Sbjct: 87 FQVDP-----ILGGNEALRHLLEVAHAHGV 111
Score = 30.4 bits (69), Expect = 4.5
Identities = 8/30 (26%), Positives = 15/30 (50%), Gaps = 5/30 (16%)
Query: 245 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 274
+ VD + G E L++L++ H G+
Sbjct: 87 FQVDP-----ILGGNEALRHLLEVAHAHGV 111
Score = 30.4 bits (69), Expect = 4.5
Identities = 8/30 (26%), Positives = 15/30 (50%), Gaps = 5/30 (16%)
Query: 264 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 293
+ VD + G E L++L++ H G+
Sbjct: 87 FQVDP-----ILGGNEALRHLLEVAHAHGV 111
Score = 30.4 bits (69), Expect = 4.5
Identities = 8/30 (26%), Positives = 15/30 (50%), Gaps = 5/30 (16%)
Query: 283 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 312
+ VD + G E L++L++ H G+
Sbjct: 87 FQVDP-----ILGGNEALRHLLEVAHAHGV 111
Score = 30.4 bits (69), Expect = 4.5
Identities = 8/30 (26%), Positives = 15/30 (50%), Gaps = 5/30 (16%)
Query: 302 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 331
+ VD + G E L++L++ H G+
Sbjct: 87 FQVDP-----ILGGNEALRHLLEVAHAHGV 111
Score = 30.4 bits (69), Expect = 4.5
Identities = 8/30 (26%), Positives = 15/30 (50%), Gaps = 5/30 (16%)
Query: 321 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 350
+ VD + G E L++L++ H G+
Sbjct: 87 FQVDP-----ILGGNEALRHLLEVAHAHGV 111
Score = 30.4 bits (69), Expect = 4.5
Identities = 8/30 (26%), Positives = 15/30 (50%), Gaps = 5/30 (16%)
Query: 340 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 369
+ VD + G E L++L++ H G+
Sbjct: 87 FQVDP-----ILGGNEALRHLLEVAHAHGV 111
Score = 30.4 bits (69), Expect = 4.5
Identities = 8/30 (26%), Positives = 15/30 (50%), Gaps = 5/30 (16%)
Query: 359 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 388
+ VD + G E L++L++ H G+
Sbjct: 87 FQVDP-----ILGGNEALRHLLEVAHAHGV 111
Score = 30.4 bits (69), Expect = 4.5
Identities = 8/30 (26%), Positives = 15/30 (50%), Gaps = 5/30 (16%)
Query: 378 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 407
+ VD + G E L++L++ H G+
Sbjct: 87 FQVDP-----ILGGNEALRHLLEVAHAHGV 111
Score = 30.4 bits (69), Expect = 4.5
Identities = 8/30 (26%), Positives = 15/30 (50%), Gaps = 5/30 (16%)
Query: 397 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 426
+ VD + G E L++L++ H G+
Sbjct: 87 FQVDP-----ILGGNEALRHLLEVAHAHGV 111
Score = 30.4 bits (69), Expect = 4.5
Identities = 8/30 (26%), Positives = 15/30 (50%), Gaps = 5/30 (16%)
Query: 416 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 445
+ VD + G E L++L++ H G+
Sbjct: 87 FQVDP-----ILGGNEALRHLLEVAHAHGV 111
Score = 30.4 bits (69), Expect = 4.5
Identities = 8/30 (26%), Positives = 15/30 (50%), Gaps = 5/30 (16%)
Query: 435 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 464
+ VD + G E L++L++ H G+
Sbjct: 87 FQVDP-----ILGGNEALRHLLEVAHAHGV 111
Score = 30.4 bits (69), Expect = 4.5
Identities = 8/30 (26%), Positives = 15/30 (50%), Gaps = 5/30 (16%)
Query: 454 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 483
+ VD + G E L++L++ H G+
Sbjct: 87 FQVDP-----ILGGNEALRHLLEVAHAHGV 111
Score = 30.4 bits (69), Expect = 4.5
Identities = 8/30 (26%), Positives = 15/30 (50%), Gaps = 5/30 (16%)
Query: 473 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 502
+ VD + G E L++L++ H G+
Sbjct: 87 FQVDP-----ILGGNEALRHLLEVAHAHGV 111
Score = 30.4 bits (69), Expect = 4.5
Identities = 8/30 (26%), Positives = 15/30 (50%), Gaps = 5/30 (16%)
Query: 492 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 521
+ VD + G E L++L++ H G+
Sbjct: 87 FQVDP-----ILGGNEALRHLLEVAHAHGV 111
Score = 30.4 bits (69), Expect = 4.5
Identities = 8/30 (26%), Positives = 15/30 (50%), Gaps = 5/30 (16%)
Query: 511 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 540
+ VD + G E L++L++ H G+
Sbjct: 87 FQVDP-----ILGGNEALRHLLEVAHAHGV 111
Score = 30.4 bits (69), Expect = 4.5
Identities = 8/30 (26%), Positives = 15/30 (50%), Gaps = 5/30 (16%)
Query: 530 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 559
+ VD + G E L++L++ H G+
Sbjct: 87 FQVDP-----ILGGNEALRHLLEVAHAHGV 111
Score = 30.4 bits (69), Expect = 4.5
Identities = 8/30 (26%), Positives = 15/30 (50%), Gaps = 5/30 (16%)
Query: 549 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 578
+ VD + G E L++L++ H G+
Sbjct: 87 FQVDP-----ILGGNEALRHLLEVAHAHGV 111
Score = 30.4 bits (69), Expect = 4.5
Identities = 8/30 (26%), Positives = 15/30 (50%), Gaps = 5/30 (16%)
Query: 568 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 597
+ VD + G E L++L++ H G+
Sbjct: 87 FQVDP-----ILGGNEALRHLLEVAHAHGV 111
Score = 30.4 bits (69), Expect = 4.5
Identities = 8/30 (26%), Positives = 15/30 (50%), Gaps = 5/30 (16%)
Query: 587 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 616
+ VD + G E L++L++ H G+
Sbjct: 87 FQVDP-----ILGGNEALRHLLEVAHAHGV 111
Score = 30.4 bits (69), Expect = 4.5
Identities = 8/30 (26%), Positives = 15/30 (50%), Gaps = 5/30 (16%)
Query: 606 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 635
+ VD + G E L++L++ H G+
Sbjct: 87 FQVDP-----ILGGNEALRHLLEVAHAHGV 111
Score = 30.4 bits (69), Expect = 4.5
Identities = 8/30 (26%), Positives = 15/30 (50%), Gaps = 5/30 (16%)
Query: 625 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 654
+ VD + G E L++L++ H G+
Sbjct: 87 FQVDP-----ILGGNEALRHLLEVAHAHGV 111
Score = 30.4 bits (69), Expect = 4.5
Identities = 8/30 (26%), Positives = 15/30 (50%), Gaps = 5/30 (16%)
Query: 644 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 673
+ VD + G E L++L++ H G+
Sbjct: 87 FQVDP-----ILGGNEALRHLLEVAHAHGV 111
Score = 30.4 bits (69), Expect = 4.5
Identities = 8/30 (26%), Positives = 15/30 (50%), Gaps = 5/30 (16%)
Query: 663 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 692
+ VD + G E L++L++ H G+
Sbjct: 87 FQVDP-----ILGGNEALRHLLEVAHAHGV 111
Score = 30.4 bits (69), Expect = 4.5
Identities = 8/30 (26%), Positives = 15/30 (50%), Gaps = 5/30 (16%)
Query: 682 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 711
+ VD + G E L++L++ H G+
Sbjct: 87 FQVDP-----ILGGNEALRHLLEVAHAHGV 111
Score = 30.4 bits (69), Expect = 4.5
Identities = 8/30 (26%), Positives = 15/30 (50%), Gaps = 5/30 (16%)
Query: 701 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 730
+ VD + G E L++L++ H G+
Sbjct: 87 FQVDP-----ILGGNEALRHLLEVAHAHGV 111
Score = 30.4 bits (69), Expect = 4.5
Identities = 8/30 (26%), Positives = 15/30 (50%), Gaps = 5/30 (16%)
Query: 720 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 749
+ VD + G E L++L++ H G+
Sbjct: 87 FQVDP-----ILGGNEALRHLLEVAHAHGV 111
Score = 30.4 bits (69), Expect = 4.5
Identities = 8/30 (26%), Positives = 15/30 (50%), Gaps = 5/30 (16%)
Query: 739 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 768
+ VD + G E L++L++ H G+
Sbjct: 87 FQVDP-----ILGGNEALRHLLEVAHAHGV 111
Score = 30.4 bits (69), Expect = 5.0
Identities = 6/19 (31%), Positives = 11/19 (57%)
Query: 123 FGTPEQLKYLVDECHKAGL 141
G E L++L++ H G+
Sbjct: 93 LGGNEALRHLLEVAHAHGV 111
>3bc9_A AMYB, alpha amylase, catalytic region; acarbose, thermostable,
halophilic, N domain, starch binding, hydrolase; HET: G6D
GLC ACI BGC ACR; 1.35A {Halothermothrix orenii} PDB:
3bcd_A* 3bcf_A
Length = 599
Score = 57.3 bits (138), Expect = 3e-08
Identities = 26/148 (17%), Positives = 44/148 (29%), Gaps = 51/148 (34%)
Query: 1033 FGTPEQLKYLVDECHKAGLYVLLDVVHSH-----------ASKNVLDGLNEFDGTQACFF 1081
+GT +L+ +D H + V D V +H +N D ++ F
Sbjct: 205 YGTKGELENAIDALHNNDIKVYFDAVLNHRMGADYAETVLLDENSRDKPGQYIKAWTGFN 264
Query: 1082 HDGPRGTHP--LWDSRLF--------------------------------------NYSE 1101
G G + W+ + F +Y
Sbjct: 265 FPGRNGEYSNFTWNGQCFDGTDWDDYSKESGKYLFDEKSWDWTYNWDEDYLMGADVDYEN 324
Query: 1102 IEVLRFLLSNLRWYLDEYQFDGFRFDGV 1129
V ++ +W ++ FDGFR D V
Sbjct: 325 EAVQNDVIDWGQWIINNIDFDGFRLDAV 352
Score = 39.9 bits (93), Expect = 0.005
Identities = 10/66 (15%), Positives = 20/66 (30%), Gaps = 6/66 (9%)
Query: 769 FGTPEQLKYLVDECHKAGLLCFMHVV---CAAGDFNNWNREEFAYK---KLDFGKWELVL 822
+GT +L+ +D H + + V D+ + + W
Sbjct: 205 YGTKGELENAIDALHNNDIKVYFDAVLNHRMGADYAETVLLDENSRDKPGQYIKAWTGFN 264
Query: 823 PPNPDG 828
P +G
Sbjct: 265 FPGRNG 270
Score = 31.1 bits (70), Expect = 3.3
Identities = 5/19 (26%), Positives = 10/19 (52%)
Query: 123 FGTPEQLKYLVDECHKAGL 141
+GT +L+ +D H +
Sbjct: 205 YGTKGELENAIDALHNNDI 223
Score = 31.1 bits (70), Expect = 3.3
Identities = 5/19 (26%), Positives = 10/19 (52%)
Query: 142 FGTPEQLKYLVDECHKAGL 160
+GT +L+ +D H +
Sbjct: 205 YGTKGELENAIDALHNNDI 223
Score = 31.1 bits (70), Expect = 3.3
Identities = 5/19 (26%), Positives = 10/19 (52%)
Query: 161 FGTPEQLKYLVDECHKAGL 179
+GT +L+ +D H +
Sbjct: 205 YGTKGELENAIDALHNNDI 223
Score = 31.1 bits (70), Expect = 3.3
Identities = 5/19 (26%), Positives = 10/19 (52%)
Query: 180 FGTPEQLKYLVDECHKAGL 198
+GT +L+ +D H +
Sbjct: 205 YGTKGELENAIDALHNNDI 223
Score = 31.1 bits (70), Expect = 3.3
Identities = 5/19 (26%), Positives = 10/19 (52%)
Query: 199 FGTPEQLKYLVDECHKAGL 217
+GT +L+ +D H +
Sbjct: 205 YGTKGELENAIDALHNNDI 223
Score = 31.1 bits (70), Expect = 3.3
Identities = 5/19 (26%), Positives = 10/19 (52%)
Query: 218 FGTPEQLKYLVDECHKAGL 236
+GT +L+ +D H +
Sbjct: 205 YGTKGELENAIDALHNNDI 223
Score = 31.1 bits (70), Expect = 3.3
Identities = 5/19 (26%), Positives = 10/19 (52%)
Query: 237 FGTPEQLKYLVDECHKAGL 255
+GT +L+ +D H +
Sbjct: 205 YGTKGELENAIDALHNNDI 223
Score = 31.1 bits (70), Expect = 3.3
Identities = 5/19 (26%), Positives = 10/19 (52%)
Query: 256 FGTPEQLKYLVDECHKAGL 274
+GT +L+ +D H +
Sbjct: 205 YGTKGELENAIDALHNNDI 223
Score = 31.1 bits (70), Expect = 3.3
Identities = 5/19 (26%), Positives = 10/19 (52%)
Query: 275 FGTPEQLKYLVDECHKAGL 293
+GT +L+ +D H +
Sbjct: 205 YGTKGELENAIDALHNNDI 223
Score = 31.1 bits (70), Expect = 3.3
Identities = 5/19 (26%), Positives = 10/19 (52%)
Query: 294 FGTPEQLKYLVDECHKAGL 312
+GT +L+ +D H +
Sbjct: 205 YGTKGELENAIDALHNNDI 223
Score = 31.1 bits (70), Expect = 3.3
Identities = 5/19 (26%), Positives = 10/19 (52%)
Query: 313 FGTPEQLKYLVDECHKAGL 331
+GT +L+ +D H +
Sbjct: 205 YGTKGELENAIDALHNNDI 223
Score = 31.1 bits (70), Expect = 3.3
Identities = 5/19 (26%), Positives = 10/19 (52%)
Query: 332 FGTPEQLKYLVDECHKAGL 350
+GT +L+ +D H +
Sbjct: 205 YGTKGELENAIDALHNNDI 223
Score = 31.1 bits (70), Expect = 3.3
Identities = 5/19 (26%), Positives = 10/19 (52%)
Query: 351 FGTPEQLKYLVDECHKAGL 369
+GT +L+ +D H +
Sbjct: 205 YGTKGELENAIDALHNNDI 223
Score = 31.1 bits (70), Expect = 3.3
Identities = 5/19 (26%), Positives = 10/19 (52%)
Query: 370 FGTPEQLKYLVDECHKAGL 388
+GT +L+ +D H +
Sbjct: 205 YGTKGELENAIDALHNNDI 223
Score = 31.1 bits (70), Expect = 3.3
Identities = 5/19 (26%), Positives = 10/19 (52%)
Query: 389 FGTPEQLKYLVDECHKAGL 407
+GT +L+ +D H +
Sbjct: 205 YGTKGELENAIDALHNNDI 223
Score = 31.1 bits (70), Expect = 3.3
Identities = 5/19 (26%), Positives = 10/19 (52%)
Query: 408 FGTPEQLKYLVDECHKAGL 426
+GT +L+ +D H +
Sbjct: 205 YGTKGELENAIDALHNNDI 223
Score = 31.1 bits (70), Expect = 3.3
Identities = 5/19 (26%), Positives = 10/19 (52%)
Query: 427 FGTPEQLKYLVDECHKAGL 445
+GT +L+ +D H +
Sbjct: 205 YGTKGELENAIDALHNNDI 223
Score = 31.1 bits (70), Expect = 3.3
Identities = 5/19 (26%), Positives = 10/19 (52%)
Query: 446 FGTPEQLKYLVDECHKAGL 464
+GT +L+ +D H +
Sbjct: 205 YGTKGELENAIDALHNNDI 223
Score = 31.1 bits (70), Expect = 3.3
Identities = 5/19 (26%), Positives = 10/19 (52%)
Query: 465 FGTPEQLKYLVDECHKAGL 483
+GT +L+ +D H +
Sbjct: 205 YGTKGELENAIDALHNNDI 223
Score = 31.1 bits (70), Expect = 3.3
Identities = 5/19 (26%), Positives = 10/19 (52%)
Query: 484 FGTPEQLKYLVDECHKAGL 502
+GT +L+ +D H +
Sbjct: 205 YGTKGELENAIDALHNNDI 223
Score = 31.1 bits (70), Expect = 3.3
Identities = 5/19 (26%), Positives = 10/19 (52%)
Query: 503 FGTPEQLKYLVDECHKAGL 521
+GT +L+ +D H +
Sbjct: 205 YGTKGELENAIDALHNNDI 223
Score = 31.1 bits (70), Expect = 3.3
Identities = 5/19 (26%), Positives = 10/19 (52%)
Query: 522 FGTPEQLKYLVDECHKAGL 540
+GT +L+ +D H +
Sbjct: 205 YGTKGELENAIDALHNNDI 223
Score = 31.1 bits (70), Expect = 3.3
Identities = 5/19 (26%), Positives = 10/19 (52%)
Query: 541 FGTPEQLKYLVDECHKAGL 559
+GT +L+ +D H +
Sbjct: 205 YGTKGELENAIDALHNNDI 223
Score = 31.1 bits (70), Expect = 3.3
Identities = 5/19 (26%), Positives = 10/19 (52%)
Query: 560 FGTPEQLKYLVDECHKAGL 578
+GT +L+ +D H +
Sbjct: 205 YGTKGELENAIDALHNNDI 223
Score = 31.1 bits (70), Expect = 3.3
Identities = 5/19 (26%), Positives = 10/19 (52%)
Query: 579 FGTPEQLKYLVDECHKAGL 597
+GT +L+ +D H +
Sbjct: 205 YGTKGELENAIDALHNNDI 223
Score = 31.1 bits (70), Expect = 3.3
Identities = 5/19 (26%), Positives = 10/19 (52%)
Query: 598 FGTPEQLKYLVDECHKAGL 616
+GT +L+ +D H +
Sbjct: 205 YGTKGELENAIDALHNNDI 223
Score = 31.1 bits (70), Expect = 3.3
Identities = 5/19 (26%), Positives = 10/19 (52%)
Query: 617 FGTPEQLKYLVDECHKAGL 635
+GT +L+ +D H +
Sbjct: 205 YGTKGELENAIDALHNNDI 223
Score = 31.1 bits (70), Expect = 3.3
Identities = 5/19 (26%), Positives = 10/19 (52%)
Query: 636 FGTPEQLKYLVDECHKAGL 654
+GT +L+ +D H +
Sbjct: 205 YGTKGELENAIDALHNNDI 223
Score = 31.1 bits (70), Expect = 3.3
Identities = 5/19 (26%), Positives = 10/19 (52%)
Query: 655 FGTPEQLKYLVDECHKAGL 673
+GT +L+ +D H +
Sbjct: 205 YGTKGELENAIDALHNNDI 223
Score = 31.1 bits (70), Expect = 3.3
Identities = 5/19 (26%), Positives = 10/19 (52%)
Query: 674 FGTPEQLKYLVDECHKAGL 692
+GT +L+ +D H +
Sbjct: 205 YGTKGELENAIDALHNNDI 223
Score = 31.1 bits (70), Expect = 3.3
Identities = 5/19 (26%), Positives = 10/19 (52%)
Query: 693 FGTPEQLKYLVDECHKAGL 711
+GT +L+ +D H +
Sbjct: 205 YGTKGELENAIDALHNNDI 223
Score = 31.1 bits (70), Expect = 3.3
Identities = 5/19 (26%), Positives = 10/19 (52%)
Query: 712 FGTPEQLKYLVDECHKAGL 730
+GT +L+ +D H +
Sbjct: 205 YGTKGELENAIDALHNNDI 223
Score = 31.1 bits (70), Expect = 3.3
Identities = 5/19 (26%), Positives = 10/19 (52%)
Query: 731 FGTPEQLKYLVDECHKAGL 749
+GT +L+ +D H +
Sbjct: 205 YGTKGELENAIDALHNNDI 223
Score = 31.1 bits (70), Expect = 3.3
Identities = 5/19 (26%), Positives = 10/19 (52%)
Query: 750 FGTPEQLKYLVDECHKAGL 768
+GT +L+ +D H +
Sbjct: 205 YGTKGELENAIDALHNNDI 223
>2wsk_A Glycogen debranching enzyme; carbohydrate metabolism, hydrolase,
glycosidase, ISO-amylase glycosyl hydrolase, glycogen
metabolism; 2.25A {Escherichia coli k-12}
Length = 657
Score = 55.3 bits (134), Expect = 1e-07
Identities = 27/112 (24%), Positives = 46/112 (41%), Gaps = 38/112 (33%)
Query: 1037 EQLKYLVDECHKAGLYVLLDVVHSHASKNVLDGLNEFDGTQACFFHDGP----RG----- 1087
++ + + HKAG+ V+LD+V +H++ E D DGP RG
Sbjct: 242 DEFRDAIKALHKAGIEVILDIVLNHSA--------ELD-------LDGPLFSLRGIDNRS 286
Query: 1088 ---THPLWDSRLFNYS---------EIEVLRFLLSNLRWYLDEYQFDGFRFD 1127
D N++ V+ + + LR++++ DGFRFD
Sbjct: 287 YYWIRE--DGDYHNWTGCGNTLNLSHPAVVDYASACLRYWVETCHVDGFRFD 336
>2e8y_A AMYX protein, pullulanase; multiple domain, beta-alpha-barrel,
alpha-amylase-family, HY; 2.11A {Bacillus subtilis} PDB:
2e8z_A* 2e9b_A*
Length = 718
Score = 54.7 bits (132), Expect = 2e-07
Identities = 25/105 (23%), Positives = 42/105 (40%), Gaps = 32/105 (30%)
Query: 1039 LKYLVDECHKAGLYVLLDVVHSH-ASKNVLDGLNEFDGTQACFFHDGPRGTHP-----LW 1092
LK +++ H+ GL V+LDVV +H + + T P
Sbjct: 318 LKQMINTLHQHGLRVILDVVFNHVYKRE----------------NSPFEKTVPGYFFRHD 361
Query: 1093 DSRLF-NYS----EIE-----VLRFLLSNLRWYLDEYQFDGFRFD 1127
+ N + +I +F+ + ++L+EY DGFRFD
Sbjct: 362 ECGKPSNGTGVGNDIASERRMARKFIADCVVYWLEEYNVDGFRFD 406
>3faw_A Reticulocyte binding protein; TIM barrel, beta barrel, hydrolase,
cell WALL, peptidoglycan-anchor, secreted; 2.10A
{Streptococcus agalactiae COH1} PDB: 3fax_A*
Length = 877
Score = 54.1 bits (130), Expect = 2e-07
Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 31/103 (30%)
Query: 1039 LKYLVDECHKAGLYVLLDVVHSH-ASKNVLDG--------LNEFDGTQACFFHDGPRG-- 1087
LK L+ + HK G+ V+LDVV++H A + + +NE DG+ + G
Sbjct: 372 LKQLIHDIHKRGMGVILDVVYNHTAKTYLFEDIEPNYYHFMNE-DGS----PRESFGGGR 426
Query: 1088 ---THPLWDSRLFNYSEIEVLRFLLSNLRWYLDEYQFDGFRFD 1127
TH + R L+ ++++ E++ DGFRFD
Sbjct: 427 LGTTHAM------------SRRVLVDSIKYLTSEFKVDGFRFD 457
>3zss_A Putative glucanohydrolase PEP1A; alpha-glucan biosynthesis, glycoside
hydrolase FA; 1.80A {Streptomyces coelicolor} PDB:
3zst_A* 3zt5_A* 3zt6_A* 3zt7_A*
Length = 695
Score = 53.8 bits (129), Expect = 3e-07
Identities = 32/186 (17%), Positives = 54/186 (29%), Gaps = 56/186 (30%)
Query: 1033 FGTPEQLKYLVDECHKAGLYVLLDVVHSHASKNVL-----DGLNEFDGTQACFFHDGPRG 1087
GT + + V E K GL + LD + + + +FH P G
Sbjct: 317 LGTLDDFDHFVTEAGKLGLEIALDFALQCSPDHPWVHKHPE-----------WFHHRPDG 365
Query: 1088 THPLWDSRLFNYSEI----------EVLRFLLSNLRWYLDEYQFDGFRFDGVTSMLYHNH 1137
T ++ Y +I + + LR ++D FR D
Sbjct: 366 TIAHAENPPKKYQDIYPIAFDADPDGLATETVRILRHWMDH-GVRIFRVD---------- 414
Query: 1138 GCGEGFSGHYDEYFGLNVDTDALIYLMVANKFLHDKYPEIITIAEDVSGMPASCRPVTEG 1197
N T + + ++ P++I +AE PA +
Sbjct: 415 ----------------NPHTKPVAFWERVIADINGTDPDVIFLAE-AFTRPAMMATL--A 455
Query: 1198 GTGFDY 1203
GF
Sbjct: 456 QIGFQQ 461
Score = 34.9 bits (80), Expect = 0.19
Identities = 12/70 (17%), Positives = 22/70 (31%), Gaps = 11/70 (15%)
Query: 769 FGTPEQLKYLVDECHKAGLLCFMHVVCAAGDFNNWNRE-----------EFAYKKLDFGK 817
GT + + V E K GL + + W + A+ + K
Sbjct: 317 LGTLDDFDHFVTEAGKLGLEIALDFALQCSPDHPWVHKHPEWFHHRPDGTIAHAENPPKK 376
Query: 818 WELVLPPNPD 827
++ + P D
Sbjct: 377 YQDIYPIAFD 386
Score = 29.9 bits (67), Expect = 7.2
Identities = 7/19 (36%), Positives = 9/19 (47%)
Query: 123 FGTPEQLKYLVDECHKAGL 141
GT + + V E K GL
Sbjct: 317 LGTLDDFDHFVTEAGKLGL 335
Score = 29.9 bits (67), Expect = 7.2
Identities = 7/19 (36%), Positives = 9/19 (47%)
Query: 142 FGTPEQLKYLVDECHKAGL 160
GT + + V E K GL
Sbjct: 317 LGTLDDFDHFVTEAGKLGL 335
Score = 29.9 bits (67), Expect = 7.2
Identities = 7/19 (36%), Positives = 9/19 (47%)
Query: 161 FGTPEQLKYLVDECHKAGL 179
GT + + V E K GL
Sbjct: 317 LGTLDDFDHFVTEAGKLGL 335
Score = 29.9 bits (67), Expect = 7.2
Identities = 7/19 (36%), Positives = 9/19 (47%)
Query: 180 FGTPEQLKYLVDECHKAGL 198
GT + + V E K GL
Sbjct: 317 LGTLDDFDHFVTEAGKLGL 335
Score = 29.9 bits (67), Expect = 7.2
Identities = 7/19 (36%), Positives = 9/19 (47%)
Query: 199 FGTPEQLKYLVDECHKAGL 217
GT + + V E K GL
Sbjct: 317 LGTLDDFDHFVTEAGKLGL 335
Score = 29.9 bits (67), Expect = 7.2
Identities = 7/19 (36%), Positives = 9/19 (47%)
Query: 218 FGTPEQLKYLVDECHKAGL 236
GT + + V E K GL
Sbjct: 317 LGTLDDFDHFVTEAGKLGL 335
Score = 29.9 bits (67), Expect = 7.2
Identities = 7/19 (36%), Positives = 9/19 (47%)
Query: 237 FGTPEQLKYLVDECHKAGL 255
GT + + V E K GL
Sbjct: 317 LGTLDDFDHFVTEAGKLGL 335
Score = 29.9 bits (67), Expect = 7.2
Identities = 7/19 (36%), Positives = 9/19 (47%)
Query: 256 FGTPEQLKYLVDECHKAGL 274
GT + + V E K GL
Sbjct: 317 LGTLDDFDHFVTEAGKLGL 335
Score = 29.9 bits (67), Expect = 7.2
Identities = 7/19 (36%), Positives = 9/19 (47%)
Query: 275 FGTPEQLKYLVDECHKAGL 293
GT + + V E K GL
Sbjct: 317 LGTLDDFDHFVTEAGKLGL 335
Score = 29.9 bits (67), Expect = 7.2
Identities = 7/19 (36%), Positives = 9/19 (47%)
Query: 294 FGTPEQLKYLVDECHKAGL 312
GT + + V E K GL
Sbjct: 317 LGTLDDFDHFVTEAGKLGL 335
Score = 29.9 bits (67), Expect = 7.2
Identities = 7/19 (36%), Positives = 9/19 (47%)
Query: 313 FGTPEQLKYLVDECHKAGL 331
GT + + V E K GL
Sbjct: 317 LGTLDDFDHFVTEAGKLGL 335
Score = 29.9 bits (67), Expect = 7.2
Identities = 7/19 (36%), Positives = 9/19 (47%)
Query: 332 FGTPEQLKYLVDECHKAGL 350
GT + + V E K GL
Sbjct: 317 LGTLDDFDHFVTEAGKLGL 335
Score = 29.9 bits (67), Expect = 7.2
Identities = 7/19 (36%), Positives = 9/19 (47%)
Query: 351 FGTPEQLKYLVDECHKAGL 369
GT + + V E K GL
Sbjct: 317 LGTLDDFDHFVTEAGKLGL 335
Score = 29.9 bits (67), Expect = 7.2
Identities = 7/19 (36%), Positives = 9/19 (47%)
Query: 370 FGTPEQLKYLVDECHKAGL 388
GT + + V E K GL
Sbjct: 317 LGTLDDFDHFVTEAGKLGL 335
Score = 29.9 bits (67), Expect = 7.2
Identities = 7/19 (36%), Positives = 9/19 (47%)
Query: 389 FGTPEQLKYLVDECHKAGL 407
GT + + V E K GL
Sbjct: 317 LGTLDDFDHFVTEAGKLGL 335
Score = 29.9 bits (67), Expect = 7.2
Identities = 7/19 (36%), Positives = 9/19 (47%)
Query: 408 FGTPEQLKYLVDECHKAGL 426
GT + + V E K GL
Sbjct: 317 LGTLDDFDHFVTEAGKLGL 335
Score = 29.9 bits (67), Expect = 7.2
Identities = 7/19 (36%), Positives = 9/19 (47%)
Query: 427 FGTPEQLKYLVDECHKAGL 445
GT + + V E K GL
Sbjct: 317 LGTLDDFDHFVTEAGKLGL 335
Score = 29.9 bits (67), Expect = 7.2
Identities = 7/19 (36%), Positives = 9/19 (47%)
Query: 446 FGTPEQLKYLVDECHKAGL 464
GT + + V E K GL
Sbjct: 317 LGTLDDFDHFVTEAGKLGL 335
Score = 29.9 bits (67), Expect = 7.2
Identities = 7/19 (36%), Positives = 9/19 (47%)
Query: 465 FGTPEQLKYLVDECHKAGL 483
GT + + V E K GL
Sbjct: 317 LGTLDDFDHFVTEAGKLGL 335
Score = 29.9 bits (67), Expect = 7.2
Identities = 7/19 (36%), Positives = 9/19 (47%)
Query: 484 FGTPEQLKYLVDECHKAGL 502
GT + + V E K GL
Sbjct: 317 LGTLDDFDHFVTEAGKLGL 335
Score = 29.9 bits (67), Expect = 7.2
Identities = 7/19 (36%), Positives = 9/19 (47%)
Query: 503 FGTPEQLKYLVDECHKAGL 521
GT + + V E K GL
Sbjct: 317 LGTLDDFDHFVTEAGKLGL 335
Score = 29.9 bits (67), Expect = 7.2
Identities = 7/19 (36%), Positives = 9/19 (47%)
Query: 522 FGTPEQLKYLVDECHKAGL 540
GT + + V E K GL
Sbjct: 317 LGTLDDFDHFVTEAGKLGL 335
Score = 29.9 bits (67), Expect = 7.2
Identities = 7/19 (36%), Positives = 9/19 (47%)
Query: 541 FGTPEQLKYLVDECHKAGL 559
GT + + V E K GL
Sbjct: 317 LGTLDDFDHFVTEAGKLGL 335
Score = 29.9 bits (67), Expect = 7.2
Identities = 7/19 (36%), Positives = 9/19 (47%)
Query: 560 FGTPEQLKYLVDECHKAGL 578
GT + + V E K GL
Sbjct: 317 LGTLDDFDHFVTEAGKLGL 335
Score = 29.9 bits (67), Expect = 7.2
Identities = 7/19 (36%), Positives = 9/19 (47%)
Query: 579 FGTPEQLKYLVDECHKAGL 597
GT + + V E K GL
Sbjct: 317 LGTLDDFDHFVTEAGKLGL 335
Score = 29.9 bits (67), Expect = 7.2
Identities = 7/19 (36%), Positives = 9/19 (47%)
Query: 598 FGTPEQLKYLVDECHKAGL 616
GT + + V E K GL
Sbjct: 317 LGTLDDFDHFVTEAGKLGL 335
Score = 29.9 bits (67), Expect = 7.2
Identities = 7/19 (36%), Positives = 9/19 (47%)
Query: 617 FGTPEQLKYLVDECHKAGL 635
GT + + V E K GL
Sbjct: 317 LGTLDDFDHFVTEAGKLGL 335
Score = 29.9 bits (67), Expect = 7.2
Identities = 7/19 (36%), Positives = 9/19 (47%)
Query: 636 FGTPEQLKYLVDECHKAGL 654
GT + + V E K GL
Sbjct: 317 LGTLDDFDHFVTEAGKLGL 335
Score = 29.9 bits (67), Expect = 7.2
Identities = 7/19 (36%), Positives = 9/19 (47%)
Query: 655 FGTPEQLKYLVDECHKAGL 673
GT + + V E K GL
Sbjct: 317 LGTLDDFDHFVTEAGKLGL 335
Score = 29.9 bits (67), Expect = 7.2
Identities = 7/19 (36%), Positives = 9/19 (47%)
Query: 674 FGTPEQLKYLVDECHKAGL 692
GT + + V E K GL
Sbjct: 317 LGTLDDFDHFVTEAGKLGL 335
Score = 29.9 bits (67), Expect = 7.2
Identities = 7/19 (36%), Positives = 9/19 (47%)
Query: 693 FGTPEQLKYLVDECHKAGL 711
GT + + V E K GL
Sbjct: 317 LGTLDDFDHFVTEAGKLGL 335
Score = 29.9 bits (67), Expect = 7.2
Identities = 7/19 (36%), Positives = 9/19 (47%)
Query: 712 FGTPEQLKYLVDECHKAGL 730
GT + + V E K GL
Sbjct: 317 LGTLDDFDHFVTEAGKLGL 335
Score = 29.9 bits (67), Expect = 7.2
Identities = 7/19 (36%), Positives = 9/19 (47%)
Query: 731 FGTPEQLKYLVDECHKAGL 749
GT + + V E K GL
Sbjct: 317 LGTLDDFDHFVTEAGKLGL 335
Score = 29.9 bits (67), Expect = 7.2
Identities = 7/19 (36%), Positives = 9/19 (47%)
Query: 750 FGTPEQLKYLVDECHKAGL 768
GT + + V E K GL
Sbjct: 317 LGTLDDFDHFVTEAGKLGL 335
>2ya1_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase;
HET: BGC GLC; 2.25A {Streptococcus pneumoniae}
Length = 1014
Score = 54.1 bits (130), Expect = 3e-07
Identities = 26/105 (24%), Positives = 45/105 (42%), Gaps = 35/105 (33%)
Query: 1039 LKYLVDECHKAGLYVLLDVVHSH-ASKNVLDG--------LNEFDGTQACFFHDGPRGT- 1088
K L++E HK G+ +LDVV++H A ++ + ++ DGT
Sbjct: 564 FKNLINEIHKRGMGAILDVVYNHTAKVDLFEDLEPNYYHFMDA-DGT----PRTS--FGG 616
Query: 1089 ------HPLWDSRLFNYSEIEVLRFLLSNLRWYLDEYQFDGFRFD 1127
H + R L+ ++++ +D Y+ DGFRFD
Sbjct: 617 GRLGTTHHM------------TKRLLIDSIKYLVDTYKVDGFRFD 649
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 54.1 bits (129), Expect = 3e-07
Identities = 85/653 (13%), Positives = 186/653 (28%), Gaps = 199/653 (30%)
Query: 600 TPEQLKYLVDECHKAGLFGTPEQLKYLVDECHKAG------LFGTPEQLKY--LVDECHK 651
+ E++ +++ L ++ Y L+
Sbjct: 47 SKEEIDHIIMSKDAV------SGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKT 100
Query: 652 AGLFGTPEQLKYLVDECHKAGLFGTPEQL-KYLV--DECH---KAGLFGTPEQLK---YL 702
+ Y+ E L+ + KY V + + + L +L+ +
Sbjct: 101 EQRQPSMMTRMYI--EQRDR-LYNDNQVFAKYNVSRLQPYLKLRQAL----LELRPAKNV 153
Query: 703 VDECHKAGLFGTPEQ-------LKYLVDECHKAGLF-------GTPEQ-LKYLVDECHKA 747
+ G+ G+ + L Y V +F +PE L+ L ++
Sbjct: 154 L--ID--GVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQI 209
Query: 748 GLFGT--PEQLKYLVDECHKAGLFGTPEQLKYLVDECHKAGLLCFMHVVCAAGDFNNWNR 805
T + + H E + L + ++ LL ++V N
Sbjct: 210 DPNWTSRSDHSSNIKLRIHSI----QAELRRLLKSKPYENCLLVLLNV---------QNA 256
Query: 806 EEFAYKKLDFGKWELVLPPNPDGSCKLTHLSQVKLVV-RNQHGHLLDRLSPWATYVTEPP 864
+ + + CK+ L+ R + + D LS A T
Sbjct: 257 KAW--NAFNLS-------------CKI-------LLTTRFKQ--VTDFLS--AATTTHIS 290
Query: 865 VVGHAYEQRIWNPKPQDKHKWTSSKPKKPDNLKIYESHVGICTQEQKCASYEDFVRVVIP 924
+ D H T + + + ++ Q+ +P
Sbjct: 291 L---------------DHHSMTLTPDE---VKSLLLKYLDCRPQD-------------LP 319
Query: 925 RIVKQG--MAIPDKWI-ELLKKFKDEDWNMGNIVHTLTNR--RYMEKTVAYAESHDQALV 979
R V + I E ++ W+ N H ++ +E ++ E +
Sbjct: 320 REVLTTNPRRL--SIIAESIRDGLAT-WD--NWKHVNCDKLTTIIESSLNVLEPAEY--- 371
Query: 980 GDKTIAFWLMDKEMYTHMSTLSDPSLIIDRACEKF---GTPEQLKYLVDECHKAGL-FGT 1035
++M+ +S + I + +V++ HK L
Sbjct: 372 -----------RKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQ 420
Query: 1036 PEQLKYLVDECHKAGLYVLLDV-------VHSHASKNVLDGLNEFDGTQACFFHDGPRGT 1088
P++ + +Y+ L V +H ++++D N F D
Sbjct: 421 PKESTISI---P--SIYLELKVKLENEYALH----RSIVDHYN----IPKTFDSDDL--I 465
Query: 1089 HPLWDSRLFNY-----------SEIEVLRFLLSNLRWYLDEYQFDGFRFDGVTSML---- 1133
P D +++ + + R + + R+ + + D ++ S+L
Sbjct: 466 PPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQ 525
Query: 1134 ----YHNHGCGEGFSGHYDEYFGLNVDTDALIYLM-VANKFLHDKYPEIITIA 1181
Y + C Y+ L +L + + KY +++ IA
Sbjct: 526 QLKFYKPYICDN--DPKYERLVN-----AILDFLPKIEENLICSKYTDLLRIA 571
Score = 47.9 bits (113), Expect = 2e-05
Identities = 49/340 (14%), Positives = 104/340 (30%), Gaps = 91/340 (26%)
Query: 799 DFNNWNREEFAYKKLDFGKWELVLPPNPDGSCKL---THLSQVKLVVRNQHGHLLDR--- 852
D + + + +++D +++ + T LS+ + +V+ +L
Sbjct: 37 DVQDMPKSILSKEEID----HIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYK 92
Query: 853 --LSPWATYVTEPPVVGHAYEQ---RIWNPKPQDKHKWTSSKPKKPDNLKIYESHVGICT 907
+SP T +P ++ Y + R++N Q K+ S+ + L+
Sbjct: 93 FLMSPIKTEQRQPSMMTRMYIEQRDRLYN-DNQVFAKYNVSRLQPYLKLRQ-------AL 144
Query: 908 QEQKCASYEDFVRVVIPRIVKQGMAIPDKW---IELLKKFKDEDWNMGNIVHTLTNRRYM 964
E + A ++ G+ K +++ +K + M + ++
Sbjct: 145 LELRPAKN----------VLIDGVLGSGKTWVALDVCLSYKVQC-KMDFKIF------WL 187
Query: 965 EKTVAYAESHDQALVGDKTIAFWLMDKEMYTHMSTLSDPSLIIDRACEKFGTPEQLKYLV 1024
+ S + L EM + DP+ + +K +
Sbjct: 188 --NLKNCNSPETVL-------------EMLQKLLYQIDPNW-----TSRSDHSSNIKLRI 227
Query: 1025 DECHKAGLFGTPEQLKYLVDECHKAGLYVLLDVVHSHASKNVLDGLNEFDGTQAC----- 1079
E + L + ++ L VLL+V + + F+ + C
Sbjct: 228 HS-------IQAELRRLLKSKPYENCLLVLLNV----QNAKAWNA---FNLS--CKILLT 271
Query: 1080 -------FFHDGPRGTHPLWDSRLFNYSEIEVLRFLLSNL 1112
F TH D + EV LL L
Sbjct: 272 TRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYL 311
Score = 39.5 bits (91), Expect = 0.008
Identities = 52/371 (14%), Positives = 98/371 (26%), Gaps = 90/371 (24%)
Query: 899 YESHVGICTQEQKCASYEDFVRVVIPRIVK--QGMAIPDKWIELLKKFK-DEDWNMGNIV 955
+ H+ T E + Y+D + V V + D +L K + D + V
Sbjct: 3 HHHHMDFETGEHQ-YQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAV 61
Query: 956 HTLTNRRYMEKTVAYAESHDQALVGD--KTIAFWLMDKEMYTHMSTLSDPSLIIDRACEK 1013
R ++ E Q V + + +LM PS++ E+
Sbjct: 62 SGT--LRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQ----RQPSMMTRMYIEQ 115
Query: 1014 ----FGTPEQL-KYLVDECHKAGLFGTPEQLKYLVDECHKAGLYVLLD----VVH--SHA 1062
+ + KY V + L + L L ++ +
Sbjct: 116 RDRLYNDNQVFAKYNVSR---------LQPYLKL-----RQALLELRPAKNVLIDGVLGS 161
Query: 1063 SKNVL--DGLNEFDGTQACFFHDGPRGTHPLWDSRLFNYSEIEVLRFLLSNLRWYLDEYQ 1120
K + D + Q W + L N + E + +L L YQ
Sbjct: 162 GKTWVALDVCLSYK-VQCKM----DFKIF--WLN-LKNCNSPETVLEMLQKLL-----YQ 208
Query: 1121 FDGFRFDGVTSMLYHNHGCGEGFSGHYDEYFGLNVDTDALIYLMVANKFLHDKYPEIITI 1180
D + ++ L L Y + +
Sbjct: 209 ID--------------PNWTSRSDHSSNIKLRIHSIQAELRRL-----LKSKPYENCLLV 249
Query: 1181 AEDVS------GMPASCR--------PVTEGGTGFDYRLVSLEGSALSALFDAAMNTTEE 1226
+V SC+ VT+ + +SL+ +++ +
Sbjct: 250 LLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMT--LTPD--EVKS 305
Query: 1227 RF-KWLSADPG 1236
K+L P
Sbjct: 306 LLLKYLDCRPQ 316
Score = 35.6 bits (81), Expect = 0.12
Identities = 58/421 (13%), Positives = 124/421 (29%), Gaps = 140/421 (33%)
Query: 636 FGTPEQLKYLVDECHKAGLFGTPEQLKYLVDECHKAGLFGTPEQLKYLVDECH--KAGLF 693
F + ++ + H L TP+++K L+ + L P+ L V + + +
Sbjct: 280 FLSAATTTHISLDHHSMTL--TPDEVKSLLLKY----LDCRPQDLPREVLTTNPRRLSII 333
Query: 694 G--------TPEQLKYLVDECHKAGLFGTPEQLKYLVDECHKAGLFGTPEQLKYLVDECH 745
T + K++ ++L +++ L P + + + D
Sbjct: 334 AESIRDGLATWDNWKHV-----------NCDKLTTIIESSLNV-L--EPAEYRKMFDRL- 378
Query: 746 KAGLF----GTPEQ-LKYLVDECHKAGLFGTPEQLKYLVDECHKAGLLCFMHVVCAAGDF 800
+F P L + + + +V++ HK L+
Sbjct: 379 --SVFPPSAHIPTILLSLIWFD-------VIKSDVMVVVNKLHKYSLV------------ 417
Query: 801 NNWNREEFAYKKLDFGKWELVLPPNPDGSCKLTHLSQVKLVVRNQHGHLLDRLSPWATYV 860
+E + L + KL + + H ++D Y
Sbjct: 418 -EKQPKESTISIPS-----IYL----ELKVKLENEYAL-------HRSIVDH------Y- 453
Query: 861 TEPPVVGHAYEQRIWNPKPQDKHKWTSSKPKKPDNLKIYESHVG----ICTQEQKCAS-- 914
P D Y SH+G ++
Sbjct: 454 -----------------NIPKTFDSDDLIPPYLDQY-FY-SHIGHHLKNIEHPERMTLFR 494
Query: 915 --YEDFVRVVIPRIVKQGMAIPDKWIELLKKFKDED--WNM-GNIVHTLTNRRYMEKTVA 969
+ DF +++E +K + + WN G+I++TL ++ + +
Sbjct: 495 MVFLDF-----------------RFLE--QKIRHDSTAWNASGSILNTLQQLKFYKPYIC 535
Query: 970 YAESHDQALVGDKTIAFWLMDKEMYTHMSTLSDPSLIIDRACEKFGTPEQLKYLVDECHK 1029
+ + LV + F L E S +D ++ A + + + +E HK
Sbjct: 536 DNDPKYERLVNA-ILDF-LPKIEENLICSKYTD---LLRIA---LMAED--EAIFEEAHK 585
Query: 1030 A 1030
Sbjct: 586 Q 586
Score = 33.7 bits (76), Expect = 0.57
Identities = 20/101 (19%), Positives = 31/101 (30%), Gaps = 44/101 (43%)
Query: 6 SVDPASIHIP---------------------ELHK--LLERDPYLNPYQYEMKRRYGLMV 42
SV P S HIP +LHK L+E+ P + + +
Sbjct: 379 SVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQP--KESTISI---PSIYL 433
Query: 43 NFLEQFEKHEGGIEKFTTSYNKYGIH---VQADNSVRCFEW 80
+ E N+Y +H V N + F+
Sbjct: 434 ELKVKLE-------------NEYALHRSIVDHYNIPKTFDS 461
Score = 32.9 bits (74), Expect = 0.87
Identities = 65/454 (14%), Positives = 145/454 (31%), Gaps = 105/454 (23%)
Query: 20 LLERD-PYL-NPYQYEMKRRYGLMVNFLEQFEKHEGGIEKFTTSYNKYGIHV---QADNS 74
+L + +L +P + E ++ + ++EQ ++ + F KY +V Q
Sbjct: 86 VLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFA----KY--NVSRLQPYLK 139
Query: 75 VRCFEWAPSAQQLYLTGNVSL-----TPWSIMEEASLSSIKLIQS----IQYILTGVFGT 125
+R + +L NV + + + + S K+ I ++ +
Sbjct: 140 LR-----QALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNS 194
Query: 126 PEQ-LKYLVDECHKAGLFGT--PEQLKYLVDECHKAGLFGTPEQLKYLVDECHKAGLF-- 180
PE L+ L ++ T + + H E + L + ++ L
Sbjct: 195 PETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSI----QAELRRLLKSKPYENCLLVL 250
Query: 181 ---GTPEQLKYLVDECHKAGLFGTPEQLKYLVDECHKAGLFGTPEQLKYLVDECHKAGLF 237
+ C K L T + K + D F + ++ + H L
Sbjct: 251 LNVQNAKAWNAFNLSC-KI-LLTT--RFKQVTD-------FLSAATTTHISLDHHSMTL- 298
Query: 238 GTPEQLKYLVDECHKAGLFGTPEQLKYLVDECH--KAGLFG--------TPEQLKYLVDE 287
TP+++K L+ + L P+ L V + + + T + K++
Sbjct: 299 -TPDEVKSLLLKY----LDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHV--- 350
Query: 288 CHKAGLFGTPEQLKYLVDECHKAGLFGTPEQLKYLVDECHKAGLF----GTPEQ-LKYLV 342
++L +++ L P + + + D +F P L +
Sbjct: 351 --------NCDKLTTIIESSLNV-L--EPAEYRKMFDRL---SVFPPSAHIPTILLSLIW 396
Query: 343 DECHKAGLFGTPEQLKYLVDECHKAGL-FGTPEQLKYLVDECHKAGLFGTPEQLKYLVDE 401
+ + +V++ HK L P++ + + L E L
Sbjct: 397 FD-------VIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLE-LKVKLENEYAL--- 445
Query: 402 CHKAGLFGTPEQLKYLVDECHKAGLFGTPEQLKY 435
H++ + + Y + + + P +Y
Sbjct: 446 -HRSIV----DH--YNIPKTFDSDDLIPPYLDQY 472
>2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase,
starch, carbohydrate; 1.65A {Bacillus acidopullulyticus}
Length = 921
Score = 53.7 bits (129), Expect = 4e-07
Identities = 27/100 (27%), Positives = 43/100 (43%), Gaps = 22/100 (22%)
Query: 1039 LKYLVDECHKAGLYVLLDVVHSH-ASKNVLDGLNEFDGTQ-ACFFHDGPRGTHPLWDSRL 1096
LK L+ H+ + V +DVV++H V D FD ++ G
Sbjct: 534 LKQLIQSLHQQRIGVNMDVVYNHTFDVMVSD----FDKIVPQYYYRTDSNGN-------Y 582
Query: 1097 FNYS----EIE-----VLRFLLSNLRWYLDEYQFDGFRFD 1127
N S E +F+L ++ ++++EY DGFRFD
Sbjct: 583 TNGSGCGNEFATEHPMAQKFVLDSVNYWVNEYHVDGFRFD 622
>2vr5_A Glycogen operon protein GLGX; hydrolase, glycosidase, glycosyl
hydrolase, glycogen debraching; HET: GLC A16; 2.8A
{Sulfolobus solfataricus} PDB: 2vnc_A* 2vuy_A
Length = 718
Score = 53.5 bits (129), Expect = 4e-07
Identities = 29/112 (25%), Positives = 48/112 (42%), Gaps = 36/112 (32%)
Query: 1037 EQLKYLVDECHKAGLYVLLDVVHSHASKNVLDGLNEFDGTQACFFHDGP----RG----- 1087
K +V+E H AG+ V++DVV++H + E + H GP RG
Sbjct: 267 LSFKKMVNELHNAGIEVIIDVVYNHTA--------EGN-------HLGPTLSFRGIDNTA 311
Query: 1088 ---THPLWDSRLFNYS---------EIEVLRFLLSNLRWYLDEYQFDGFRFD 1127
P +++ V++ +L +LR+++ E DGFRFD
Sbjct: 312 YYMLQPDNKRYYLDFTGTGNTLNLSHPRVIQMVLDSLRYWVTEMHVDGFRFD 363
>2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase;
1.85A {Streptococcus pneumoniae} PDB: 2ya2_A*
Length = 714
Score = 53.5 bits (129), Expect = 4e-07
Identities = 26/105 (24%), Positives = 45/105 (42%), Gaps = 35/105 (33%)
Query: 1039 LKYLVDECHKAGLYVLLDVVHSH-ASKNVLDG--------LNEFDGTQACFFHDGPRGT- 1088
K L++E HK G+ +LDVV++H A ++ + ++ DGT
Sbjct: 257 FKNLINEIHKRGMGAILDVVYNHTAKVDLFEDLEPNYYHFMDA-DGT----PRTS--FGG 309
Query: 1089 ------HPLWDSRLFNYSEIEVLRFLLSNLRWYLDEYQFDGFRFD 1127
H + R L+ ++++ +D Y+ DGFRFD
Sbjct: 310 GRLGTTHHM------------TKRLLIDSIKYLVDTYKVDGFRFD 342
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable,
cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus
marinus}
Length = 696
Score = 52.9 bits (127), Expect = 6e-07
Identities = 21/156 (13%), Positives = 46/156 (29%), Gaps = 48/156 (30%)
Query: 1022 YLVDECHKAGLFGTPEQLKYLVDECHKAGLYVLLDVVHSHAS------------------ 1063
+D+ GT E + LV H + ++LD+ H +
Sbjct: 302 KSIDK-----YLGTMEDFEKLVQVLHSRKIKIVLDITMHHTNPCNELFVKALREGENSPY 356
Query: 1064 ----KNVLDGLNEFDGTQACFFHDGPRGTHPLWDSRL-------------------FNYS 1100
+ E + + L+ FN+
Sbjct: 357 WEMFSFLSPPPKEIVELMLKYIDGEECRSRELYKLDYFRNNKPFYEAFFNIWLMAKFNHD 416
Query: 1101 EIEVLRFLLSNLRWYLDEYQFDGFRFDGVTSMLYHN 1136
+ + + ++++D+ DGFR D V ++++
Sbjct: 417 NPRTVDYFIDITKFWIDK-GIDGFRID-VAMGIHYS 450
Score = 32.8 bits (75), Expect = 0.89
Identities = 8/37 (21%), Positives = 13/37 (35%), Gaps = 9/37 (24%)
Query: 758 YLVDECHKAGLFGTPEQLKYLVDECHKAGLLCFMHVV 794
+D+ GT E + LV H + +V
Sbjct: 302 KSIDK-----YLGTMEDFEKLVQVLHSRK----IKIV 329
Score = 30.5 bits (69), Expect = 3.9
Identities = 7/30 (23%), Positives = 11/30 (36%), Gaps = 5/30 (16%)
Query: 131 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 160
+D+ GT E + LV H +
Sbjct: 302 KSIDK-----YLGTMEDFEKLVQVLHSRKI 326
Score = 30.5 bits (69), Expect = 3.9
Identities = 7/30 (23%), Positives = 11/30 (36%), Gaps = 5/30 (16%)
Query: 150 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 179
+D+ GT E + LV H +
Sbjct: 302 KSIDK-----YLGTMEDFEKLVQVLHSRKI 326
Score = 30.5 bits (69), Expect = 3.9
Identities = 7/30 (23%), Positives = 11/30 (36%), Gaps = 5/30 (16%)
Query: 169 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 198
+D+ GT E + LV H +
Sbjct: 302 KSIDK-----YLGTMEDFEKLVQVLHSRKI 326
Score = 30.5 bits (69), Expect = 3.9
Identities = 7/30 (23%), Positives = 11/30 (36%), Gaps = 5/30 (16%)
Query: 188 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 217
+D+ GT E + LV H +
Sbjct: 302 KSIDK-----YLGTMEDFEKLVQVLHSRKI 326
Score = 30.5 bits (69), Expect = 3.9
Identities = 7/30 (23%), Positives = 11/30 (36%), Gaps = 5/30 (16%)
Query: 207 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 236
+D+ GT E + LV H +
Sbjct: 302 KSIDK-----YLGTMEDFEKLVQVLHSRKI 326
Score = 30.5 bits (69), Expect = 3.9
Identities = 7/30 (23%), Positives = 11/30 (36%), Gaps = 5/30 (16%)
Query: 226 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 255
+D+ GT E + LV H +
Sbjct: 302 KSIDK-----YLGTMEDFEKLVQVLHSRKI 326
Score = 30.5 bits (69), Expect = 3.9
Identities = 7/30 (23%), Positives = 11/30 (36%), Gaps = 5/30 (16%)
Query: 245 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 274
+D+ GT E + LV H +
Sbjct: 302 KSIDK-----YLGTMEDFEKLVQVLHSRKI 326
Score = 30.5 bits (69), Expect = 3.9
Identities = 7/30 (23%), Positives = 11/30 (36%), Gaps = 5/30 (16%)
Query: 264 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 293
+D+ GT E + LV H +
Sbjct: 302 KSIDK-----YLGTMEDFEKLVQVLHSRKI 326
Score = 30.5 bits (69), Expect = 3.9
Identities = 7/30 (23%), Positives = 11/30 (36%), Gaps = 5/30 (16%)
Query: 283 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 312
+D+ GT E + LV H +
Sbjct: 302 KSIDK-----YLGTMEDFEKLVQVLHSRKI 326
Score = 30.5 bits (69), Expect = 3.9
Identities = 7/30 (23%), Positives = 11/30 (36%), Gaps = 5/30 (16%)
Query: 302 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 331
+D+ GT E + LV H +
Sbjct: 302 KSIDK-----YLGTMEDFEKLVQVLHSRKI 326
Score = 30.5 bits (69), Expect = 3.9
Identities = 7/30 (23%), Positives = 11/30 (36%), Gaps = 5/30 (16%)
Query: 321 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 350
+D+ GT E + LV H +
Sbjct: 302 KSIDK-----YLGTMEDFEKLVQVLHSRKI 326
Score = 30.5 bits (69), Expect = 3.9
Identities = 7/30 (23%), Positives = 11/30 (36%), Gaps = 5/30 (16%)
Query: 340 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 369
+D+ GT E + LV H +
Sbjct: 302 KSIDK-----YLGTMEDFEKLVQVLHSRKI 326
Score = 30.5 bits (69), Expect = 3.9
Identities = 7/30 (23%), Positives = 11/30 (36%), Gaps = 5/30 (16%)
Query: 359 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 388
+D+ GT E + LV H +
Sbjct: 302 KSIDK-----YLGTMEDFEKLVQVLHSRKI 326
Score = 30.5 bits (69), Expect = 3.9
Identities = 7/30 (23%), Positives = 11/30 (36%), Gaps = 5/30 (16%)
Query: 378 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 407
+D+ GT E + LV H +
Sbjct: 302 KSIDK-----YLGTMEDFEKLVQVLHSRKI 326
Score = 30.5 bits (69), Expect = 3.9
Identities = 7/30 (23%), Positives = 11/30 (36%), Gaps = 5/30 (16%)
Query: 397 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 426
+D+ GT E + LV H +
Sbjct: 302 KSIDK-----YLGTMEDFEKLVQVLHSRKI 326
Score = 30.5 bits (69), Expect = 3.9
Identities = 7/30 (23%), Positives = 11/30 (36%), Gaps = 5/30 (16%)
Query: 416 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 445
+D+ GT E + LV H +
Sbjct: 302 KSIDK-----YLGTMEDFEKLVQVLHSRKI 326
Score = 30.5 bits (69), Expect = 3.9
Identities = 7/30 (23%), Positives = 11/30 (36%), Gaps = 5/30 (16%)
Query: 435 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 464
+D+ GT E + LV H +
Sbjct: 302 KSIDK-----YLGTMEDFEKLVQVLHSRKI 326
Score = 30.5 bits (69), Expect = 3.9
Identities = 7/30 (23%), Positives = 11/30 (36%), Gaps = 5/30 (16%)
Query: 454 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 483
+D+ GT E + LV H +
Sbjct: 302 KSIDK-----YLGTMEDFEKLVQVLHSRKI 326
Score = 30.5 bits (69), Expect = 3.9
Identities = 7/30 (23%), Positives = 11/30 (36%), Gaps = 5/30 (16%)
Query: 473 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 502
+D+ GT E + LV H +
Sbjct: 302 KSIDK-----YLGTMEDFEKLVQVLHSRKI 326
Score = 30.5 bits (69), Expect = 3.9
Identities = 7/30 (23%), Positives = 11/30 (36%), Gaps = 5/30 (16%)
Query: 492 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 521
+D+ GT E + LV H +
Sbjct: 302 KSIDK-----YLGTMEDFEKLVQVLHSRKI 326
Score = 30.5 bits (69), Expect = 3.9
Identities = 7/30 (23%), Positives = 11/30 (36%), Gaps = 5/30 (16%)
Query: 511 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 540
+D+ GT E + LV H +
Sbjct: 302 KSIDK-----YLGTMEDFEKLVQVLHSRKI 326
Score = 30.5 bits (69), Expect = 3.9
Identities = 7/30 (23%), Positives = 11/30 (36%), Gaps = 5/30 (16%)
Query: 530 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 559
+D+ GT E + LV H +
Sbjct: 302 KSIDK-----YLGTMEDFEKLVQVLHSRKI 326
Score = 30.5 bits (69), Expect = 3.9
Identities = 7/30 (23%), Positives = 11/30 (36%), Gaps = 5/30 (16%)
Query: 549 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 578
+D+ GT E + LV H +
Sbjct: 302 KSIDK-----YLGTMEDFEKLVQVLHSRKI 326
Score = 30.5 bits (69), Expect = 3.9
Identities = 7/30 (23%), Positives = 11/30 (36%), Gaps = 5/30 (16%)
Query: 568 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 597
+D+ GT E + LV H +
Sbjct: 302 KSIDK-----YLGTMEDFEKLVQVLHSRKI 326
Score = 30.5 bits (69), Expect = 3.9
Identities = 7/30 (23%), Positives = 11/30 (36%), Gaps = 5/30 (16%)
Query: 587 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 616
+D+ GT E + LV H +
Sbjct: 302 KSIDK-----YLGTMEDFEKLVQVLHSRKI 326
Score = 30.5 bits (69), Expect = 3.9
Identities = 7/30 (23%), Positives = 11/30 (36%), Gaps = 5/30 (16%)
Query: 606 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 635
+D+ GT E + LV H +
Sbjct: 302 KSIDK-----YLGTMEDFEKLVQVLHSRKI 326
Score = 30.5 bits (69), Expect = 3.9
Identities = 7/30 (23%), Positives = 11/30 (36%), Gaps = 5/30 (16%)
Query: 625 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 654
+D+ GT E + LV H +
Sbjct: 302 KSIDK-----YLGTMEDFEKLVQVLHSRKI 326
Score = 30.5 bits (69), Expect = 3.9
Identities = 7/30 (23%), Positives = 11/30 (36%), Gaps = 5/30 (16%)
Query: 644 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 673
+D+ GT E + LV H +
Sbjct: 302 KSIDK-----YLGTMEDFEKLVQVLHSRKI 326
Score = 30.5 bits (69), Expect = 3.9
Identities = 7/30 (23%), Positives = 11/30 (36%), Gaps = 5/30 (16%)
Query: 663 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 692
+D+ GT E + LV H +
Sbjct: 302 KSIDK-----YLGTMEDFEKLVQVLHSRKI 326
Score = 30.5 bits (69), Expect = 3.9
Identities = 7/30 (23%), Positives = 11/30 (36%), Gaps = 5/30 (16%)
Query: 682 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 711
+D+ GT E + LV H +
Sbjct: 302 KSIDK-----YLGTMEDFEKLVQVLHSRKI 326
Score = 30.5 bits (69), Expect = 3.9
Identities = 7/30 (23%), Positives = 11/30 (36%), Gaps = 5/30 (16%)
Query: 701 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 730
+D+ GT E + LV H +
Sbjct: 302 KSIDK-----YLGTMEDFEKLVQVLHSRKI 326
Score = 30.5 bits (69), Expect = 3.9
Identities = 7/30 (23%), Positives = 11/30 (36%), Gaps = 5/30 (16%)
Query: 720 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 749
+D+ GT E + LV H +
Sbjct: 302 KSIDK-----YLGTMEDFEKLVQVLHSRKI 326
Score = 30.5 bits (69), Expect = 3.9
Identities = 7/30 (23%), Positives = 11/30 (36%), Gaps = 5/30 (16%)
Query: 739 YLVDECHKAGLFGTPEQLKYLVDECHKAGL 768
+D+ GT E + LV H +
Sbjct: 302 KSIDK-----YLGTMEDFEKLVQVLHSRKI 326
Score = 30.5 bits (69), Expect = 4.2
Identities = 6/19 (31%), Positives = 8/19 (42%)
Query: 123 FGTPEQLKYLVDECHKAGL 141
GT E + LV H +
Sbjct: 308 LGTMEDFEKLVQVLHSRKI 326
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 52.7 bits (126), Expect = 8e-07
Identities = 106/620 (17%), Positives = 176/620 (28%), Gaps = 203/620 (32%)
Query: 310 AGLFGTPEQLKYLVDECHKAGLFGTPEQLKYLV--DE-CHKAGLFGTPEQLKYLVDECHK 366
F QL+ ++ +K PE + DE A L G + L Y+
Sbjct: 24 TASFFIASQLQ---EQFNKI----LPEPTEGFAADDEPTTPAELVG--KFLGYVSSLVEP 74
Query: 367 AGLFGTPEQLKYLVDECHKAGLFGTPEQLKYLVDECHK--AGLFG----TPEQLKYLVDE 420
+ + + L + E L G ++ H A L T + K L+
Sbjct: 75 SKVGQFDQVLNLCLTEFENCYLEG---------NDIHALAAKLLQENDTTLVKTKELIKN 125
Query: 421 CHKA-GLFGTPEQLKYLVDECHKAGLFGTPEQLKYLVDECHKAGLF------GTPEQLKY 473
A + P D+ + LF + A L G + Y
Sbjct: 126 YITARIMAKRP------FDKKSNSALFRAVGE--------GNAQLVAIFGGQGNTD--DY 169
Query: 474 LVDECHKAGLFGT-PEQLKYLVDECHKAGLFGTPEQLKYLVDECHKAG-LFG-------- 523
+E L+ T + L+ E L L+ A +F
Sbjct: 170 F-EELRD--LYQTYHVLVGDLIKFSA--------ETLSELIRTTLDAEKVFTQGLNILEW 218
Query: 524 ------TPEQLKYLVDECHKA------GLFGTPEQL-KYLVDECHKAGLFGTPEQLKYLV 570
TP++ YL G+ QL Y+V G TP +L+ +
Sbjct: 219 LENPSNTPDK-DYL---LSIPISCPLIGVI----QLAHYVVT-AKLLGF--TPGELRSYL 267
Query: 571 DEC--HKAGLF--------GTPEQLKYLVDECHKAGLFGTPEQLKYLVDECHKA--GLFG 618
H GL + E V + LF ++ C++A
Sbjct: 268 KGATGHSQGLVTAVAIAETDSWESFFVSVRKAITV-LF-------FIGVRCYEAYPNTSL 319
Query: 619 TPEQLKYLVDECHKA--------GLFGTPEQLKYLVDECHK---------AGLFGTPEQL 661
P L+ ++ L T EQ++ V++ + L + L
Sbjct: 320 PPSILEDSLENNEGVPSPMLSISNL--TQEQVQDYVNKTNSHLPAGKQVEISLVNGAKNL 377
Query: 662 KYLVDECHKAGLFGTPEQLKYLVDECHKAGLFGTPEQLKYLVDECHKAGLFGTPEQLKYL 721
V + G P+ L L KA +Q + E + F ++L
Sbjct: 378 ---V-------VSGPPQSLYGLNLTLRKAKAPSGLDQSRIPFSE--RKLKFSN----RFL 421
Query: 722 -VDE-CHKAGLFGTPEQLKYLVDECHKAGLFGTPEQLKYLV-------DECHKAGLFGTP 772
V H L + + + K + + ++ V D +G
Sbjct: 422 PVASPFHSHLLVPASDLIN---KDLVKNNVSFNAKDIQIPVYDTFDGSDLRVLSG----- 473
Query: 773 EQLKYLVDECHKAGLLCFMHVVCAAGDFNNWNREEFAYKK-----LDFGKWELVLPPNPD 827
+ +VD + + V W E + LDFG P
Sbjct: 474 SISERIVD------CIIRLPV--------KW---ETTTQFKATHILDFG---------PG 507
Query: 828 GSCKLTHLSQVKLVVRNQHG 847
G+ L L RN+ G
Sbjct: 508 GASGLG-----VLTHRNKDG 522
Score = 52.0 bits (124), Expect = 1e-06
Identities = 106/616 (17%), Positives = 174/616 (28%), Gaps = 217/616 (35%)
Query: 405 AGLFGTPEQLKYLVDECHKAGLFGTPEQLKYLV--DE-CHKAGLFGTPEQLKYLVDECHK 461
F QL+ ++ +K PE + DE A L G + L Y+
Sbjct: 24 TASFFIASQLQ---EQFNKI----LPEPTEGFAADDEPTTPAELVG--KFLGYVSSLVEP 74
Query: 462 AGLFGTPEQLKYLVDECHKAGLFGTPEQLKYLVDECHK--AGLFG----TPEQLKYLVDE 515
+ + + L + E L G ++ H A L T + K L+
Sbjct: 75 SKVGQFDQVLNLCLTEFENCYLEG---------NDIHALAAKLLQENDTTLVKTKELIKN 125
Query: 516 CHKA-GLFGTPEQLKYLVDECHKAGLFGTPEQLKYLVDECHKAGLF------GTPEQLKY 568
A + P D+ + LF + A L G + Y
Sbjct: 126 YITARIMAKRP------FDKKSNSALFRAVGE--------GNAQLVAIFGGQGNTD--DY 169
Query: 569 LVDECHKAGLFGT-PEQLKYLVDECHKAGLFGTPEQLKYLVDECHKAG-LFG-------- 618
+E L+ T + L+ E L L+ A +F
Sbjct: 170 F-EELRD--LYQTYHVLVGDLIKFSA--------ETLSELIRTTLDAEKVFTQGLNILEW 218
Query: 619 ------TPEQLKYLVDECHKA------GLFGTPEQL-KYLVDECHKAGLFGTPEQLKYLV 665
TP++ YL G+ QL Y+V G TP +L+ +
Sbjct: 219 LENPSNTPDK-DYL---LSIPISCPLIGVI----QLAHYVVT-AKLLGF--TPGELRSYL 267
Query: 666 DEC--HKAGLF--------GTPEQLKYLVDECHKAGLFGTPEQLKYLVDECHKA--GLFG 713
H GL + E V + LF ++ C++A
Sbjct: 268 KGATGHSQGLVTAVAIAETDSWESFFVSVRKAITV-LF-------FIGVRCYEAYPNTSL 319
Query: 714 TPEQLKYLVDECHKA--------GLFGTPEQLKYLVDECHK---------AGLFGTPEQL 756
P L+ ++ L T EQ++ V++ + L + L
Sbjct: 320 PPSILEDSLENNEGVPSPMLSISNL--TQEQVQDYVNKTNSHLPAGKQVEISLVNGAKNL 377
Query: 757 KYLVDECHKAGLFGTPEQLKYLVDECHKAGLLCFMHVVCAAGDFNNWNREEFAYKKLDFG 816
V + G P+ L L K A + +R F+ +KL F
Sbjct: 378 ---V-------VSGPPQSLYGLNLTLRK---------AKAPSGLDQ-SRIPFSERKLKFS 417
Query: 817 KWELVLP---PNPDGSCKLTHLSQVKLVVRNQHGHLLDRLSPWATYVTEPPVVGHAYEQR 873
LP P H HLL + +
Sbjct: 418 N--RFLPVASP--------------------FHSHLLVP--------ASDLINKDLVKNN 447
Query: 874 IWNPKPQDKHKWTSSKPKKPDNLKIYESHVGICTQEQKCASYEDFVRV----VIPRIVKQ 929
+ + + + P +Y++ G D +RV + RIV
Sbjct: 448 V---------SFNAKDIQIP----VYDTFDG-----------SD-LRVLSGSISERIVDC 482
Query: 930 GMAIPDKWIELLKKFK 945
+ +P KW E +FK
Sbjct: 483 IIRLPVKW-ETTTQFK 497
Score = 51.2 bits (122), Expect = 2e-06
Identities = 88/499 (17%), Positives = 146/499 (29%), Gaps = 163/499 (32%)
Query: 101 MEEASLSSIKLIQ-SIQYIL---TGVFGTPEQLKYLVDECHKAGLFGTPEQLKYLV--DE 154
M+ S + L S++++L T F QL+ ++ +K PE + DE
Sbjct: 1 MDAYSTRPLTLSHGSLEHVLLVPTASFFIASQLQ---EQFNKI----LPEPTEGFAADDE 53
Query: 155 -CHKAGLFGTPEQLKYLVDECHKAGLFGTPEQLKYLVDECHKAGLFGTPEQLKYLVDECH 213
A L G + L Y+ + + + L + E L G ++ H
Sbjct: 54 PTTPAELVG--KFLGYVSSLVEPSKVGQFDQVLNLCLTEFENCYLEG---------NDIH 102
Query: 214 K--AGLFG----TPEQLKYLVDECHKA-GLFGTPEQLKYLVDECHKAGLFGTPEQLKYLV 266
A L T + K L+ A + P D+ + LF +
Sbjct: 103 ALAAKLLQENDTTLVKTKELIKNYITARIMAKRP------FDKKSNSALFRAVGE----- 151
Query: 267 DECHKAGLF------GTPEQLKYLVDECHKAGLFGT-PEQLKYLVDECHKAGLFGTPEQL 319
A L G + Y +E L+ T + L+ E L
Sbjct: 152 ---GNAQLVAIFGGQGNTD--DYF-EELRD--LYQTYHVLVGDLIKFSA--------ETL 195
Query: 320 KYLVDECHKAG-LFG--------------TPEQLKYLVDECHKA------GLFGTPEQL- 357
L+ A +F TP++ YL G+ QL
Sbjct: 196 SELIRTTLDAEKVFTQGLNILEWLENPSNTPDK-DYL---LSIPISCPLIGVI----QLA 247
Query: 358 KYLVDECHKAGLFGTPEQLKYLVDECHKAGLFGTPEQLKYLVDECHKAGLF--------G 409
Y+V G TP +L+ + G G H GL
Sbjct: 248 HYVVT-AKLLGF--TPGELRSYL-----KGATG------------HSQGLVTAVAIAETD 287
Query: 410 TPEQLKYLVDECHKAGLFGTPEQLKYLVDECHKA--GLFGTPEQLKYLVDECHKA----- 462
+ E V + LF ++ C++A P L+ ++
Sbjct: 288 SWESFFVSVRKAITV-LF-------FIGVRCYEAYPNTSLPPSILEDSLENNEGVPSPML 339
Query: 463 ---GLFGTPEQLKYLVDECHK---------AGLFGTPEQLKYLVDECHKAGLFGTPEQLK 510
L T EQ++ V++ + L + L V + G P+ L
Sbjct: 340 SISNL--TQEQVQDYVNKTNSHLPAGKQVEISLVNGAKNL---V-------VSGPPQSLY 387
Query: 511 YLVDECHKAGLFGTPEQLK 529
L KA +Q +
Sbjct: 388 GLNLTLRKAKAPSGLDQSR 406
Score = 50.4 bits (120), Expect = 4e-06
Identities = 111/660 (16%), Positives = 175/660 (26%), Gaps = 264/660 (40%)
Query: 709 AGLFGTPEQLKYLVDECHKAGLFGTPEQLKYLV--DE-CHKAGLFGTPEQLKYLVDECHK 765
F QL+ ++ +K PE + DE A L G + L Y+
Sbjct: 24 TASFFIASQLQ---EQFNKI----LPEPTEGFAADDEPTTPAELVG--KFLGYVSSLVEP 74
Query: 766 AGLFGTPEQLKYLVDECHKAGLLCFM-----HVVCAAGDFNNWNREEFAYKKLDFGKWEL 820
+ + + L + E ++ H + A
Sbjct: 75 SKVGQFDQVLNLCLTEFENC----YLEGNDIHALAAK----------------------- 107
Query: 821 VLPPNPDGSCKLTHLSQVKLVVRN------QHGHLLDRLSPWA----------------- 857
L D T L + K +++N D+ S A
Sbjct: 108 -LLQEND-----TTLVKTKELIKNYITARIMAKRPFDKKSNSALFRAVGEGNAQLVAIFG 161
Query: 858 ------TYVTE--------PPVVG---------------HAYEQRIWNPKPQDKHKWTSS 888
Y E +VG + + + +W +
Sbjct: 162 GQGNTDDYFEELRDLYQTYHVLVGDLIKFSAETLSELIRTTLDAEKVFTQGLNILEWLEN 221
Query: 889 KPKKPDN---LKIYESHVGIC-TQEQKCASYEDFVRVVIPRIVKQGMAIPDKWIELLKKF 944
PD L I S I Q A Y ++ G P EL
Sbjct: 222 PSNTPDKDYLLSIPISCPLIGVIQ---LAHYVVTAKL-------LGFT-PG---ELRSYL 267
Query: 945 KDEDWNMGNIVHT---LTNRRYMEKTVAYAESHD---------QALVGDKTIAFW--LMD 990
K G H+ +T VA AE+ +A+ T+ F+ +
Sbjct: 268 K------GATGHSQGLVT-------AVAIAETDSWESFFVSVRKAI----TVLFFIGVRC 310
Query: 991 KEMYTHMSTLSDPSLIIDRACEKFGTPE-QLKYLVDECHKAGLFGTPEQLKYLVDECHKA 1049
E Y + S PS++ D G P L + + L T EQ++ V++ +
Sbjct: 311 YEAYPNTS--LPPSILEDSLENNEGVPSPML--SI-----SNL--TQEQVQDYVNKTNS- 358
Query: 1050 GLYVLLDVVHSHASKNVLDGLNEFDGTQACFFHDGPR-----GTHPLWDSRLFNYSEIEV 1104
H A K V L +G + G P +
Sbjct: 359 ---------HLPAGKQVEISL-----------VNGAKNLVVSG-PP------------QS 385
Query: 1105 LRFLLSNLRWY-----LDEYQ--FD------GFRFDGVTSMLYHNHGCGEGFSGHYDEYF 1151
L L LR LD+ + F RF V S +H+H
Sbjct: 386 LYGLNLTLRKAKAPSGLDQSRIPFSERKLKFSNRFLPVASP-FHSH-------------- 430
Query: 1152 GLNVDTDALIYLMVAN-KFLHDKYPEIITIAEDVSGMPASCR-PVTEGGTGFDYRLVSLE 1209
L+ A+ D ++ + PV + G D R L
Sbjct: 431 ----------LLVPASDLINKDLVKNNVSFN------AKDIQIPVYDTFDGSDLR--VLS 472
Query: 1210 GSALSALFDAAMNTTEERFKWLSADPGYVSTKHEGDKVIIF-----ERAGLLFAFNFNGT 1264
GS + D KW + H ++ F G+L N +GT
Sbjct: 473 GSISERIVDCI---IRLPVKWETTTQ--FKATH----ILDFGPGGASGLGVLTHRNKDGT 523
Score = 49.3 bits (117), Expect = 1e-05
Identities = 54/316 (17%), Positives = 89/316 (28%), Gaps = 108/316 (34%)
Query: 2 GNSQSVDPASIHIPELHKLLERDPYLNPYQYEMKRRYGLMVNFLEQFEKHEGGIEKFTTS 61
GN+ + EL RD Y Y + L + + EK
Sbjct: 164 GNTDD------YFEEL-----RDLY-QTYHVLVGDLIKFSAETLSELIRTTLDAEKV--- 208
Query: 62 YNKYGIHVQADNSVRCFEW------APSAQQLYLTGNVSLTPWSIMEEASLSSIKLIQSI 115
+ + G+++ W P YL SI S I +IQ
Sbjct: 209 FTQ-GLNILE--------WLENPSNTPDKD--YLL--------SI--PISCPLIGVIQLA 247
Query: 116 QYILTGVFGTPEQLKYLVDECHKAGLFGTPEQLKYLVDEC--HKAGLF--------GTPE 165
Y++T G TP +L+ + H GL + E
Sbjct: 248 HYVVT---------------AKLLGF--TPGELRSYLKGATGHSQGLVTAVAIAETDSWE 290
Query: 166 QLKYLVDECHKAGLFGTPEQLKYLVDECHKA--GLFGTPEQLKYLVDECHKA-------- 215
V + LF ++ C++A P L+ ++
Sbjct: 291 SFFVSVRKAITV-LF-------FIGVRCYEAYPNTSLPPSILEDSLENNEGVPSPMLSIS 342
Query: 216 GLFGTPEQLKYLVDECHK---------AGLFGTPEQLKYLVDECHKAGLFGTPEQLKYLV 266
L T EQ++ V++ + L + LV + G P+ L L
Sbjct: 343 NL--TQEQVQDYVNKTNSHLPAGKQVEISLVNGAKN---LV-------VSGPPQSLYGLN 390
Query: 267 DECHKAGLFGTPEQLK 282
KA +Q +
Sbjct: 391 LTLRKAKAPSGLDQSR 406
Score = 48.9 bits (116), Expect = 1e-05
Identities = 45/296 (15%), Positives = 83/296 (28%), Gaps = 77/296 (26%)
Query: 987 WLMDKEMYTHMSTLSDP-SLIIDRACEKFGTPEQ-----------LKYLVDECHKAGLFG 1034
L+ + S L + + I+ E F ++ L Y+ + +
Sbjct: 20 LLVPTASFFIASQLQEQFNKILPEPTEGFAADDEPTTPAELVGKFLGYVSSLVEPSKVGQ 79
Query: 1035 TPEQLKYLVDECHKAGLYVLLDVVHSHASKNVLDGLNEFDGT----------QACFFHDG 1084
+ L + E Y+ + +H+ A+K L N+ A
Sbjct: 80 FDQVLNLCLTEFENC--YLEGNDIHALAAK--LLQENDTTLVKTKELIKNYITARIMAKR 135
Query: 1085 PRGTHPLWDSRLFNYSEIEVLRFLL-----SNLRWYLDEYQ--FDGFR------FDGVTS 1131
P +S LF + + N Y +E + + +
Sbjct: 136 PFDKKS--NSALFRAVGEGNAQLVAIFGGQGNTDDYFEELRDLYQTYHVLVGDLIKFSAE 193
Query: 1132 MLYHNHGCGEGFSGHYDEYFGLNV-----------DTDALIYLMVANKFLHDKYPEI--- 1177
L + + GLN+ D D L+ + ++ P I
Sbjct: 194 TLSELIRTTLDAEKVFTQ--GLNILEWLENPSNTPDKDYLLSIPIS-------CPLIGVI 244
Query: 1178 ----ITIAEDVSGM-PASCRPVTEGGTGFDYRLVSLEGSALSALFDAAMNTTEERF 1228
+ + G P R +G TG LV +A+ A + E F
Sbjct: 245 QLAHYVVTAKLLGFTPGELRSYLKGATGHSQGLV-------TAVA-IAETDSWESF 292
Score = 46.2 bits (109), Expect = 8e-05
Identities = 108/632 (17%), Positives = 179/632 (28%), Gaps = 190/632 (30%)
Query: 595 AGLFGTPEQLKYLVDECHKAGLFGTPEQLKYLV--DE-CHKAGLFGTPEQLKYLVDECHK 651
F QL+ ++ +K PE + DE A L G + L Y+
Sbjct: 24 TASFFIASQLQ---EQFNKI----LPEPTEGFAADDEPTTPAELVG--KFLGYVSSLVEP 74
Query: 652 AGLFGTPEQLKYLVDECHKAGLFGTPEQLKYLVDECHK--AGLFG----TPEQLKYLVDE 705
+ + + L + E L G ++ H A L T + K L+
Sbjct: 75 SKVGQFDQVLNLCLTEFENCYLEG---------NDIHALAAKLLQENDTTLVKTKELIKN 125
Query: 706 CHKA-GLFGTPEQLKYLVDECHKAGLFGTPEQLKYLVDECHKAGLF------GTPEQLKY 758
A + P D+ + LF + A L G + Y
Sbjct: 126 YITARIMAKRP------FDKKSNSALFRAVGE--------GNAQLVAIFGGQGNTD--DY 169
Query: 759 LVDECHKAGLFGTPEQLKYLVDECHKAGLLCFMHVVCAAGDFNNWNREEFAYKKLDFGKW 818
+E L+ T LV + L+ F + + E+ + L+ +W
Sbjct: 170 F-EELRD--LYQTY---HVLVGD-----LIKFSAETLSELIRTTLDAEKVFTQGLNILEW 218
Query: 819 ELVLP-PNPDG--------SCKLTHLSQVK--LVVRNQHG----HLLDRLSPWATYVTEP 863
L P PD SC L + Q+ +V G L L AT ++
Sbjct: 219 -LENPSNTPDKDYLLSIPISCPLIGVIQLAHYVVTAKLLGFTPGELRSYLK-GATGHSQG 276
Query: 864 PVVGHAYEQRIWNPKPQDKHKWTSSKPKKPDNLKIYESHVGICTQEQKCASYEDFVRVVI 923
V A + W S + + +G+ E + +
Sbjct: 277 LVTAVAIAE---------TDSWESFFVSVRKAITVL-FFIGVRCYEA-------YPNTSL 319
Query: 924 -PRIVK------QGMAIPDKWIELLKKFKDEDWNMGNIVHTLTNRRYMEKTVAYAESHDQ 976
P I++ +G+ P M +I + + ++ V SH
Sbjct: 320 PPSILEDSLENNEGVPSP----------------MLSISNL--TQEQVQDYVNKTNSH-- 359
Query: 977 ALVGDKTIAFWLMDKEMYTHMSTLSDPSLIIDRACEKF---GTPEQLKYLVDECHKAGLF 1033
L K + SL+ + G P+ L L KA
Sbjct: 360 -LPAGKQVEI-----------------SLVNGA--KNLVVSGPPQSLYGLNLTLRKAKAP 399
Query: 1034 GTPEQLKYLVDECHKAGLYVLLDV---VHSH----ASKNVLDGLN----EFDGTQACF-- 1080
+Q + E L V HSH AS + L F+
Sbjct: 400 SGLDQSRIPFSERKLKFSNRFLPVASPFHSHLLVPASDLINKDLVKNNVSFNAKDIQIPV 459
Query: 1081 FH--DGPRGTHPLWDSRLFNYSEIEVL-RFLLSN-LRW----------YLDEYQFDGFRF 1126
+ DG D R+ + S E + ++ ++W LD F
Sbjct: 460 YDTFDGS-------DLRVLSGSISERIVDCIIRLPVKWETTTQFKATHILD---FGPGGA 509
Query: 1127 DGVTSMLYHN-HGCGEGF-------SGHYDEY 1150
G+ + + N G G D+Y
Sbjct: 510 SGLGVLTHRNKDGTGVRVIVAGTLDINPDDDY 541
Score = 45.0 bits (106), Expect = 2e-04
Identities = 67/404 (16%), Positives = 108/404 (26%), Gaps = 146/404 (36%)
Query: 74 SVRCFEWAPSAQQLYLTGN------VSLTPWSIMEEASLSSIKLIQSIQYILTGVFGTPE 127
+ FE YL GN L + +L K + + P
Sbjct: 87 CLTEFE------NCYLEGNDIHALAAKLLQ---ENDTTLVKTKELIKNYITARIMAKRP- 136
Query: 128 QLKYLVDECHKAGLFGTPEQLKYLVDECHKAGLF------GTPEQLKYLVDECHKAGLFG 181
D+ + LF + A L G + Y +E L+
Sbjct: 137 -----FDKKSNSALFRAVGE--------GNAQLVAIFGGQGNTD--DYF-EELRD--LYQ 178
Query: 182 T-PEQLKYLVDECHKAGLFGTPEQLKYLVDECHKAG-LFG--------------TPEQLK 225
T + L+ E L L+ A +F TP++
Sbjct: 179 TYHVLVGDLIKFSA--------ETLSELIRTTLDAEKVFTQGLNILEWLENPSNTPDK-D 229
Query: 226 YLVDECHKA------GLFGTPEQL-KYLVDECHKAGLFGTPEQLKYLVDECHKAGLFGTP 278
YL G+ QL Y+V G TP +L+ + G G
Sbjct: 230 YL---LSIPISCPLIGVI----QLAHYVVT-AKLLGF--TPGELRSYL-----KGATG-- 272
Query: 279 EQLKYLVDECHKAGLF--------GTPEQLKYLVDECHKAGLFGTPEQLKYLVDECHKA- 329
H GL + E V + LF ++ C++A
Sbjct: 273 ----------HSQGLVTAVAIAETDSWESFFVSVRKAITV-LF-------FIGVRCYEAY 314
Query: 330 -GLFGTPEQLKYLVDECHKA--------GLFGTPEQLKYLVDECHK---------AGLFG 371
P L+ ++ L T EQ++ V++ + L
Sbjct: 315 PNTSLPPSILEDSLENNEGVPSPMLSISNL--TQEQVQDYVNKTNSHLPAGKQVEISLVN 372
Query: 372 TPEQLKYLVDECHKAGLFGTPEQLKYLVDECHKAGLFGTPEQLK 415
+ L V + G P+ L L KA +Q +
Sbjct: 373 GAKNL---V-------VSGPPQSLYGLNLTLRKAKAPSGLDQSR 406
Score = 45.0 bits (106), Expect = 2e-04
Identities = 80/459 (17%), Positives = 132/459 (28%), Gaps = 144/459 (31%)
Query: 215 AGLFGTPEQLKYLVDECHKAGLFGTPEQLKYLV--DE-CHKAGLFGTPEQLKYLVDECHK 271
F QL+ ++ +K PE + DE A L G + L Y+
Sbjct: 24 TASFFIASQLQ---EQFNKI----LPEPTEGFAADDEPTTPAELVG--KFLGYVSSLVEP 74
Query: 272 AGLFGTPEQLKYLVDECHKAGLFGTPEQLKYLVDECHK--AGLFG----TPEQLKYLVDE 325
+ + + L + E L G ++ H A L T + K L+
Sbjct: 75 SKVGQFDQVLNLCLTEFENCYLEG---------NDIHALAAKLLQENDTTLVKTKELIKN 125
Query: 326 CHKA-GLFGTPEQLKYLVDECHKAGLFGTPEQLKYLVDECHKAGLF------GTPEQLKY 378
A + P D+ + LF + A L G + Y
Sbjct: 126 YITARIMAKRP------FDKKSNSALFRAVGE--------GNAQLVAIFGGQGNTD--DY 169
Query: 379 LVDECHKAGLFGT-PEQLKYLVDECHKAGLFGTPEQLKYLVDECHKAG-LFG-------- 428
+E L+ T + L+ E L L+ A +F
Sbjct: 170 F-EELRD--LYQTYHVLVGDLIKFSA--------ETLSELIRTTLDAEKVFTQGLNILEW 218
Query: 429 ------TPEQLKYLVDECHKA------GLFGTPEQL-KYLVDECHKAGLFGTPEQLKYLV 475
TP++ YL G+ QL Y+V G TP +L+ +
Sbjct: 219 LENPSNTPDK-DYL---LSIPISCPLIGVI----QLAHYVVT-AKLLGF--TPGELRSYL 267
Query: 476 DEC--HKAGLF--------GTPEQLKYLVDECHKAGLFGTPEQLKYLVDECHKA--GLFG 523
H GL + E V + LF ++ C++A
Sbjct: 268 KGATGHSQGLVTAVAIAETDSWESFFVSVRKAITV-LF-------FIGVRCYEAYPNTSL 319
Query: 524 TPEQLKYLVDECHKA--------GLFGTPEQLKYLVDECHK---------AGLFGTPEQL 566
P L+ ++ L T EQ++ V++ + L + L
Sbjct: 320 PPSILEDSLENNEGVPSPMLSISNL--TQEQVQDYVNKTNSHLPAGKQVEISLVNGAKNL 377
Query: 567 KYLVDECHKAGLFGTPEQLKYLVDECHKAGLFGTPEQLK 605
V + G P+ L L KA +Q +
Sbjct: 378 ---V-------VSGPPQSLYGLNLTLRKAKAPSGLDQSR 406
Score = 45.0 bits (106), Expect = 2e-04
Identities = 80/459 (17%), Positives = 132/459 (28%), Gaps = 144/459 (31%)
Query: 234 AGLFGTPEQLKYLVDECHKAGLFGTPEQLKYLV--DE-CHKAGLFGTPEQLKYLVDECHK 290
F QL+ ++ +K PE + DE A L G + L Y+
Sbjct: 24 TASFFIASQLQ---EQFNKI----LPEPTEGFAADDEPTTPAELVG--KFLGYVSSLVEP 74
Query: 291 AGLFGTPEQLKYLVDECHKAGLFGTPEQLKYLVDECHK--AGLFG----TPEQLKYLVDE 344
+ + + L + E L G ++ H A L T + K L+
Sbjct: 75 SKVGQFDQVLNLCLTEFENCYLEG---------NDIHALAAKLLQENDTTLVKTKELIKN 125
Query: 345 CHKA-GLFGTPEQLKYLVDECHKAGLFGTPEQLKYLVDECHKAGLF------GTPEQLKY 397
A + P D+ + LF + A L G + Y
Sbjct: 126 YITARIMAKRP------FDKKSNSALFRAVGE--------GNAQLVAIFGGQGNTD--DY 169
Query: 398 LVDECHKAGLFGT-PEQLKYLVDECHKAGLFGTPEQLKYLVDECHKAG-LFG-------- 447
+E L+ T + L+ E L L+ A +F
Sbjct: 170 F-EELRD--LYQTYHVLVGDLIKFSA--------ETLSELIRTTLDAEKVFTQGLNILEW 218
Query: 448 ------TPEQLKYLVDECHKA------GLFGTPEQL-KYLVDECHKAGLFGTPEQLKYLV 494
TP++ YL G+ QL Y+V G TP +L+ +
Sbjct: 219 LENPSNTPDK-DYL---LSIPISCPLIGVI----QLAHYVVT-AKLLGF--TPGELRSYL 267
Query: 495 DEC--HKAGLF--------GTPEQLKYLVDECHKAGLFGTPEQLKYLVDECHKA--GLFG 542
H GL + E V + LF ++ C++A
Sbjct: 268 KGATGHSQGLVTAVAIAETDSWESFFVSVRKAITV-LF-------FIGVRCYEAYPNTSL 319
Query: 543 TPEQLKYLVDECHKA--------GLFGTPEQLKYLVDECHK---------AGLFGTPEQL 585
P L+ ++ L T EQ++ V++ + L + L
Sbjct: 320 PPSILEDSLENNEGVPSPMLSISNL--TQEQVQDYVNKTNSHLPAGKQVEISLVNGAKNL 377
Query: 586 KYLVDECHKAGLFGTPEQLKYLVDECHKAGLFGTPEQLK 624
V + G P+ L L KA +Q +
Sbjct: 378 ---V-------VSGPPQSLYGLNLTLRKAKAPSGLDQSR 406
Score = 45.0 bits (106), Expect = 2e-04
Identities = 80/459 (17%), Positives = 132/459 (28%), Gaps = 144/459 (31%)
Query: 253 AGLFGTPEQLKYLVDECHKAGLFGTPEQLKYLV--DE-CHKAGLFGTPEQLKYLVDECHK 309
F QL+ ++ +K PE + DE A L G + L Y+
Sbjct: 24 TASFFIASQLQ---EQFNKI----LPEPTEGFAADDEPTTPAELVG--KFLGYVSSLVEP 74
Query: 310 AGLFGTPEQLKYLVDECHKAGLFGTPEQLKYLVDECHK--AGLFG----TPEQLKYLVDE 363
+ + + L + E L G ++ H A L T + K L+
Sbjct: 75 SKVGQFDQVLNLCLTEFENCYLEG---------NDIHALAAKLLQENDTTLVKTKELIKN 125
Query: 364 CHKA-GLFGTPEQLKYLVDECHKAGLFGTPEQLKYLVDECHKAGLF------GTPEQLKY 416
A + P D+ + LF + A L G + Y
Sbjct: 126 YITARIMAKRP------FDKKSNSALFRAVGE--------GNAQLVAIFGGQGNTD--DY 169
Query: 417 LVDECHKAGLFGT-PEQLKYLVDECHKAGLFGTPEQLKYLVDECHKAG-LFG-------- 466
+E L+ T + L+ E L L+ A +F
Sbjct: 170 F-EELRD--LYQTYHVLVGDLIKFSA--------ETLSELIRTTLDAEKVFTQGLNILEW 218
Query: 467 ------TPEQLKYLVDECHKA------GLFGTPEQL-KYLVDECHKAGLFGTPEQLKYLV 513
TP++ YL G+ QL Y+V G TP +L+ +
Sbjct: 219 LENPSNTPDK-DYL---LSIPISCPLIGVI----QLAHYVVT-AKLLGF--TPGELRSYL 267
Query: 514 DEC--HKAGLF--------GTPEQLKYLVDECHKAGLFGTPEQLKYLVDECHKA--GLFG 561
H GL + E V + LF ++ C++A
Sbjct: 268 KGATGHSQGLVTAVAIAETDSWESFFVSVRKAITV-LF-------FIGVRCYEAYPNTSL 319
Query: 562 TPEQLKYLVDECHKA--------GLFGTPEQLKYLVDECHK---------AGLFGTPEQL 604
P L+ ++ L T EQ++ V++ + L + L
Sbjct: 320 PPSILEDSLENNEGVPSPMLSISNL--TQEQVQDYVNKTNSHLPAGKQVEISLVNGAKNL 377
Query: 605 KYLVDECHKAGLFGTPEQLKYLVDECHKAGLFGTPEQLK 643
V + G P+ L L KA +Q +
Sbjct: 378 ---V-------VSGPPQSLYGLNLTLRKAKAPSGLDQSR 406
Score = 35.4 bits (81), Expect = 0.16
Identities = 63/412 (15%), Positives = 110/412 (26%), Gaps = 145/412 (35%)
Query: 845 QHGHLLDRLSPWATYVTEPPVVGHAYEQRIWN------PKPQDKHKWTSSKPKKPDNLKI 898
HG L +V P ++ P+P + +P P L
Sbjct: 12 SHGSL--------EHVLLVPTASFFIASQLQEQFNKILPEPTEGF-AADDEPTTPAELVG 62
Query: 899 -YESHVGICTQEQKCASYEDFVRVVIPRIVKQGMAIPDKWIELLKKFKDEDWNMGNIVHT 957
+ +V + K ++ + + L +F + + GN +H
Sbjct: 63 KFLGYVSSLVEPSKVGQFDQVLNLC------------------LTEF-ENCYLEGNDIHA 103
Query: 958 LTNRRYMEKTVAYAESHDQALVGDKTIAFWLMDKEMYTHMSTLSDP------SLIIDRAC 1011
L + +D LV K + K T P S +
Sbjct: 104 L--------AAKLLQENDTTLVKTKELI-----KNYITARIMAKRPFDKKSNSALFRAVG 150
Query: 1012 EKFGTPEQLKYLVDECHKAGLF------GTPEQLKYLVDECHKAGLY-----VLLDVVHS 1060
E A L G + Y +E LY ++ D++
Sbjct: 151 EG---------------NAQLVAIFGGQGNTD--DYF-EELRD--LYQTYHVLVGDLIKF 190
Query: 1061 HASKNVLDGLNEFDGTQACFFHDGPRGTHPL-W--------DSRLFNYSEIEV-LRFLLS 1110
A L L F +G + L W D I L ++
Sbjct: 191 SA--ETLSELIRTTLDAEKVF---TQGLNILEWLENPSNTPDKDYLLSIPISCPLIGVIQ 245
Query: 1111 NLRWYLDEYQFDGF-------RFDGVTSMLYHNHGCGEGF--------SGHYDEYFGLNV 1155
L Y+ + GF G T G +G + ++ +F
Sbjct: 246 -LAHYVVTAKLLGFTPGELRSYLKGAT-------GHSQGLVTAVAIAETDSWESFF--VS 295
Query: 1156 DTDALIYLMVANKFL-----HDKYP------EIITIAEDVS-GMPA---SCR 1192
A+ L F ++ YP I+ + + + G+P+ S
Sbjct: 296 VRKAITVL-----FFIGVRCYEAYPNTSLPPSILEDSLENNEGVPSPMLSIS 342
>4aio_A Limit dextrinase; hydrolase, pullulanase, glycoside hydrolase family
13; 1.90A {Hordeum vulgare} PDB: 2x4c_A* 2y4s_A* 2y5e_A*
2x4b_A
Length = 884
Score = 50.6 bits (121), Expect = 3e-06
Identities = 22/104 (21%), Positives = 38/104 (36%), Gaps = 27/104 (25%)
Query: 1039 LKYLVDECHKAGLYVLLDVVHSH-ASKNVLDGLNEFDGTQ-ACFFHDGPRGT-------- 1088
+ +V ++ GL V++DVV++H S + D + G
Sbjct: 381 YRQMVQALNRIGLRVVMDVVYNHLDSSGPCGISSVLDKIVPGYYVRRDTNGQIENSAAMN 440
Query: 1089 -----HPLWDSRLFNYSEIEVLRFLLSNLRWYLDEYQFDGFRFD 1127
H + V R ++ +L + Y+ DGFRFD
Sbjct: 441 NTASEHFM------------VDRLIVDDLLNWAVNYKVDGFRFD 472
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase;
HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis}
SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A*
1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Length = 448
Score = 49.7 bits (118), Expect = 4e-06
Identities = 31/220 (14%), Positives = 59/220 (26%), Gaps = 39/220 (17%)
Query: 1033 FGTPEQLKYLVDECHKAGLYVLLDVVHSHASKN-------VLDGLNEFDGTQACFFHD-G 1084
G Q +V+ C AG+ + +D + +H + G F FH+
Sbjct: 61 GGNRAQFIDMVNRCSAAGVDIYVDTLINHMAAGSGTGTAGNSFGNKSFPIYSPQDFHESC 120
Query: 1085 PRGTHPLWDSRL------------FNYSEIEVLRFLLSNLRWYLDEYQFDGFRFD----- 1127
+ R + + V + + + GFRFD
Sbjct: 121 TINNSDYGNDRYRVQNCELVGLADLDTASNYVQNTIAAYINDLQA-IGVKGFRFDASKHV 179
Query: 1128 ------GVTSMLYHNHGC-GEGFSG-----HYDEYFGLNVDTDALIYLMVANKFLHDKYP 1175
+ + + + E EY + T+ + N F +
Sbjct: 180 AASDIQSLMAKVNGSPVVFQEVIDQGGEAVGASEYLSTGLVTEFKYSTELGNTFRNGSLA 239
Query: 1176 EIITIAEDVSGMPASCRPVTEGGTGFDYRLVSLEGSALSA 1215
+ E G S V + R G+ ++
Sbjct: 240 WLSNFGEGW-GFMPSSSAVVFVDNHDNQRGHGGAGNVITF 278
Score = 32.4 bits (73), Expect = 1.1
Identities = 12/56 (21%), Positives = 20/56 (35%), Gaps = 9/56 (16%)
Query: 769 FGTPEQLKYLVDECHKAGLLCFM-----HVVCAAGDFN----NWNREEFAYKKLDF 815
G Q +V+ C AG+ ++ H+ +G N+ Y DF
Sbjct: 61 GGNRAQFIDMVNRCSAAGVDIYVDTLINHMAAGSGTGTAGNSFGNKSFPIYSPQDF 116
Score = 31.2 bits (70), Expect = 2.2
Identities = 9/30 (30%), Positives = 13/30 (43%)
Query: 113 QSIQYILTGVFGTPEQLKYLVDECHKAGLF 142
Q + Y L G Q +V+ C AG+
Sbjct: 51 QPVSYELQSRGGNRAQFIDMVNRCSAAGVD 80
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase,
alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A
{Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A*
2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A*
Length = 485
Score = 49.5 bits (118), Expect = 5e-06
Identities = 25/128 (19%), Positives = 45/128 (35%), Gaps = 18/128 (14%)
Query: 1033 FGTPEQLKYLVDECHKAGLYVLLDVVHSHASKNVLDGLNEFDGTQACFFHDGPRGTHPLW 1092
+GT QL+ V G+ V DVV +H G + + +A + R
Sbjct: 79 YGTRSQLQAAVTSLKNNGIQVYGDVVMNHKG-----GADATEMVRAVEVNPNNRNQEVTG 133
Query: 1093 DSRLFNYSEIEVLRFLLSNLRWYLDEYQFDGFRFDGV--------TSMLYHNHGCGEGFS 1144
+ + ++ RF +++ + FDGV + +Y G G+ +
Sbjct: 134 EYTIEAWT-----RFDFPGRGNTHSSFKWRWYHFDGVDWDQSRRLNNRIYKFRGHGKAWD 188
Query: 1145 GHYDEYFG 1152
D G
Sbjct: 189 WEVDTENG 196
Score = 40.3 bits (94), Expect = 0.004
Identities = 26/161 (16%), Positives = 42/161 (26%), Gaps = 44/161 (27%)
Query: 1013 KFGTPEQLKYLVDEC--------------HKAGLFGTPEQLKYLVDECHKAGLYVLLDVV 1058
K+GT QL+ V HK G T V+ ++ +
Sbjct: 78 KYGTRSQLQAAVTSLKNNGIQVYGDVVMNHKGGADATEMVRAVEVNPNNRNQEVTGEYTI 137
Query: 1059 HSHASKN---VLDGLNEFDGTQACF---------------FHDGPRGTHPLWDSRL---- 1096
+ + + + F F + G W+
Sbjct: 138 EAWTRFDFPGRGNTHSSFKWRWYHFDGVDWDQSRRLNNRIYKFRGHGKAWDWEVDTENGN 197
Query: 1097 --------FNYSEIEVLRFLLSNLRWYLDEYQFDGFRFDGV 1129
+ EV+ L + WY + DGFR D V
Sbjct: 198 YDYLMYADIDMDHPEVVNELRNWGVWYTNTLGLDGFRIDAV 238
Score = 34.1 bits (78), Expect = 0.29
Identities = 13/62 (20%), Positives = 20/62 (32%), Gaps = 12/62 (19%)
Query: 769 FGTPEQLKYLVDECHKAGLLCFMHVV------------CAAGDFNNWNREEFAYKKLDFG 816
+GT QL+ V G+ + VV A + N NR + +
Sbjct: 79 YGTRSQLQAAVTSLKNNGIQVYGDVVMNHKGGADATEMVRAVEVNPNNRNQEVTGEYTIE 138
Query: 817 KW 818
W
Sbjct: 139 AW 140
Score = 31.0 bits (70), Expect = 2.8
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 123 FGTPEQLKYLVDECHKAGL 141
+GT QL+ V G+
Sbjct: 79 YGTRSQLQAAVTSLKNNGI 97
Score = 31.0 bits (70), Expect = 2.8
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 142 FGTPEQLKYLVDECHKAGL 160
+GT QL+ V G+
Sbjct: 79 YGTRSQLQAAVTSLKNNGI 97
Score = 31.0 bits (70), Expect = 2.8
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 161 FGTPEQLKYLVDECHKAGL 179
+GT QL+ V G+
Sbjct: 79 YGTRSQLQAAVTSLKNNGI 97
Score = 31.0 bits (70), Expect = 2.8
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 180 FGTPEQLKYLVDECHKAGL 198
+GT QL+ V G+
Sbjct: 79 YGTRSQLQAAVTSLKNNGI 97
Score = 31.0 bits (70), Expect = 2.8
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 199 FGTPEQLKYLVDECHKAGL 217
+GT QL+ V G+
Sbjct: 79 YGTRSQLQAAVTSLKNNGI 97
Score = 31.0 bits (70), Expect = 2.8
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 218 FGTPEQLKYLVDECHKAGL 236
+GT QL+ V G+
Sbjct: 79 YGTRSQLQAAVTSLKNNGI 97
Score = 31.0 bits (70), Expect = 2.8
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 237 FGTPEQLKYLVDECHKAGL 255
+GT QL+ V G+
Sbjct: 79 YGTRSQLQAAVTSLKNNGI 97
Score = 31.0 bits (70), Expect = 2.8
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 256 FGTPEQLKYLVDECHKAGL 274
+GT QL+ V G+
Sbjct: 79 YGTRSQLQAAVTSLKNNGI 97
Score = 31.0 bits (70), Expect = 2.8
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 275 FGTPEQLKYLVDECHKAGL 293
+GT QL+ V G+
Sbjct: 79 YGTRSQLQAAVTSLKNNGI 97
Score = 31.0 bits (70), Expect = 2.8
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 294 FGTPEQLKYLVDECHKAGL 312
+GT QL+ V G+
Sbjct: 79 YGTRSQLQAAVTSLKNNGI 97
Score = 31.0 bits (70), Expect = 2.8
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 313 FGTPEQLKYLVDECHKAGL 331
+GT QL+ V G+
Sbjct: 79 YGTRSQLQAAVTSLKNNGI 97
Score = 31.0 bits (70), Expect = 2.8
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 332 FGTPEQLKYLVDECHKAGL 350
+GT QL+ V G+
Sbjct: 79 YGTRSQLQAAVTSLKNNGI 97
Score = 31.0 bits (70), Expect = 2.8
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 351 FGTPEQLKYLVDECHKAGL 369
+GT QL+ V G+
Sbjct: 79 YGTRSQLQAAVTSLKNNGI 97
Score = 31.0 bits (70), Expect = 2.8
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 370 FGTPEQLKYLVDECHKAGL 388
+GT QL+ V G+
Sbjct: 79 YGTRSQLQAAVTSLKNNGI 97
Score = 31.0 bits (70), Expect = 2.8
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 389 FGTPEQLKYLVDECHKAGL 407
+GT QL+ V G+
Sbjct: 79 YGTRSQLQAAVTSLKNNGI 97
Score = 31.0 bits (70), Expect = 2.8
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 408 FGTPEQLKYLVDECHKAGL 426
+GT QL+ V G+
Sbjct: 79 YGTRSQLQAAVTSLKNNGI 97
Score = 31.0 bits (70), Expect = 2.8
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 427 FGTPEQLKYLVDECHKAGL 445
+GT QL+ V G+
Sbjct: 79 YGTRSQLQAAVTSLKNNGI 97
Score = 31.0 bits (70), Expect = 2.8
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 446 FGTPEQLKYLVDECHKAGL 464
+GT QL+ V G+
Sbjct: 79 YGTRSQLQAAVTSLKNNGI 97
Score = 31.0 bits (70), Expect = 2.8
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 465 FGTPEQLKYLVDECHKAGL 483
+GT QL+ V G+
Sbjct: 79 YGTRSQLQAAVTSLKNNGI 97
Score = 31.0 bits (70), Expect = 2.8
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 484 FGTPEQLKYLVDECHKAGL 502
+GT QL+ V G+
Sbjct: 79 YGTRSQLQAAVTSLKNNGI 97
Score = 31.0 bits (70), Expect = 2.8
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 503 FGTPEQLKYLVDECHKAGL 521
+GT QL+ V G+
Sbjct: 79 YGTRSQLQAAVTSLKNNGI 97
Score = 31.0 bits (70), Expect = 2.8
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 522 FGTPEQLKYLVDECHKAGL 540
+GT QL+ V G+
Sbjct: 79 YGTRSQLQAAVTSLKNNGI 97
Score = 31.0 bits (70), Expect = 2.8
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 541 FGTPEQLKYLVDECHKAGL 559
+GT QL+ V G+
Sbjct: 79 YGTRSQLQAAVTSLKNNGI 97
Score = 31.0 bits (70), Expect = 2.8
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 560 FGTPEQLKYLVDECHKAGL 578
+GT QL+ V G+
Sbjct: 79 YGTRSQLQAAVTSLKNNGI 97
Score = 31.0 bits (70), Expect = 2.8
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 579 FGTPEQLKYLVDECHKAGL 597
+GT QL+ V G+
Sbjct: 79 YGTRSQLQAAVTSLKNNGI 97
Score = 31.0 bits (70), Expect = 2.8
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 598 FGTPEQLKYLVDECHKAGL 616
+GT QL+ V G+
Sbjct: 79 YGTRSQLQAAVTSLKNNGI 97
Score = 31.0 bits (70), Expect = 2.8
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 617 FGTPEQLKYLVDECHKAGL 635
+GT QL+ V G+
Sbjct: 79 YGTRSQLQAAVTSLKNNGI 97
Score = 31.0 bits (70), Expect = 2.8
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 636 FGTPEQLKYLVDECHKAGL 654
+GT QL+ V G+
Sbjct: 79 YGTRSQLQAAVTSLKNNGI 97
Score = 31.0 bits (70), Expect = 2.8
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 655 FGTPEQLKYLVDECHKAGL 673
+GT QL+ V G+
Sbjct: 79 YGTRSQLQAAVTSLKNNGI 97
Score = 31.0 bits (70), Expect = 2.8
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 674 FGTPEQLKYLVDECHKAGL 692
+GT QL+ V G+
Sbjct: 79 YGTRSQLQAAVTSLKNNGI 97
Score = 31.0 bits (70), Expect = 2.8
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 693 FGTPEQLKYLVDECHKAGL 711
+GT QL+ V G+
Sbjct: 79 YGTRSQLQAAVTSLKNNGI 97
Score = 31.0 bits (70), Expect = 2.8
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 712 FGTPEQLKYLVDECHKAGL 730
+GT QL+ V G+
Sbjct: 79 YGTRSQLQAAVTSLKNNGI 97
Score = 31.0 bits (70), Expect = 2.8
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 731 FGTPEQLKYLVDECHKAGL 749
+GT QL+ V G+
Sbjct: 79 YGTRSQLQAAVTSLKNNGI 97
Score = 31.0 bits (70), Expect = 2.8
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 750 FGTPEQLKYLVDECHKAGL 768
+GT QL+ V G+
Sbjct: 79 YGTRSQLQAAVTSLKNNGI 97
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A
{Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1
Length = 515
Score = 49.1 bits (117), Expect = 8e-06
Identities = 29/122 (23%), Positives = 44/122 (36%), Gaps = 7/122 (5%)
Query: 1033 FGTPEQLKYLVDECHKAGLYVLLDVVHSHASKNVLDGLNEFDGTQACFFHDGPRGTHPLW 1092
+GT Q + H AG+ V DVV H K DG D + D + +
Sbjct: 78 YGTKAQYLQAIQAAHAAGMQVYADVVFDH--KGGADGTEWVDAVEVNPS-DRNQEISGTY 134
Query: 1093 DSRLFNYSEIEVLRFLLSNLRWYLDEYQFDGFRFD--GVTSMLYHNHGCGEGFSGHYDEY 1150
+ + + S+ +W Y FDG +D S +Y G G+ + D
Sbjct: 135 QIQAWTKFDFPGRGNTYSSFKW--RWYHFDGVDWDESRKLSRIYKFRGIGKAWDWEVDTE 192
Query: 1151 FG 1152
G
Sbjct: 193 NG 194
Score = 37.9 bits (88), Expect = 0.024
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 1098 NYSEIEVLRFLLSNLRWYLDEYQFDGFRFDGV 1129
+ EV+ L S +WY++ DGFR D V
Sbjct: 205 DMDHPEVVTELKSWGKWYVNTTNIDGFRLDAV 236
Score = 34.0 bits (78), Expect = 0.37
Identities = 12/62 (19%), Positives = 18/62 (29%), Gaps = 12/62 (19%)
Query: 769 FGTPEQLKYLVDECHKAGLLCFMHVVC---AAGDFNNW---------NREEFAYKKLDFG 816
+GT Q + H AG+ + VV D W +R +
Sbjct: 78 YGTKAQYLQAIQAAHAAGMQVYADVVFDHKGGADGTEWVDAVEVNPSDRNQEISGTYQIQ 137
Query: 817 KW 818
W
Sbjct: 138 AW 139
Score = 30.2 bits (68), Expect = 5.7
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 123 FGTPEQLKYLVDECHKAGL 141
+GT Q + H AG+
Sbjct: 78 YGTKAQYLQAIQAAHAAGM 96
Score = 30.2 bits (68), Expect = 5.7
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 142 FGTPEQLKYLVDECHKAGL 160
+GT Q + H AG+
Sbjct: 78 YGTKAQYLQAIQAAHAAGM 96
Score = 30.2 bits (68), Expect = 5.7
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 161 FGTPEQLKYLVDECHKAGL 179
+GT Q + H AG+
Sbjct: 78 YGTKAQYLQAIQAAHAAGM 96
Score = 30.2 bits (68), Expect = 5.7
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 180 FGTPEQLKYLVDECHKAGL 198
+GT Q + H AG+
Sbjct: 78 YGTKAQYLQAIQAAHAAGM 96
Score = 30.2 bits (68), Expect = 5.7
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 199 FGTPEQLKYLVDECHKAGL 217
+GT Q + H AG+
Sbjct: 78 YGTKAQYLQAIQAAHAAGM 96
Score = 30.2 bits (68), Expect = 5.7
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 218 FGTPEQLKYLVDECHKAGL 236
+GT Q + H AG+
Sbjct: 78 YGTKAQYLQAIQAAHAAGM 96
Score = 30.2 bits (68), Expect = 5.7
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 237 FGTPEQLKYLVDECHKAGL 255
+GT Q + H AG+
Sbjct: 78 YGTKAQYLQAIQAAHAAGM 96
Score = 30.2 bits (68), Expect = 5.7
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 256 FGTPEQLKYLVDECHKAGL 274
+GT Q + H AG+
Sbjct: 78 YGTKAQYLQAIQAAHAAGM 96
Score = 30.2 bits (68), Expect = 5.7
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 275 FGTPEQLKYLVDECHKAGL 293
+GT Q + H AG+
Sbjct: 78 YGTKAQYLQAIQAAHAAGM 96
Score = 30.2 bits (68), Expect = 5.7
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 294 FGTPEQLKYLVDECHKAGL 312
+GT Q + H AG+
Sbjct: 78 YGTKAQYLQAIQAAHAAGM 96
Score = 30.2 bits (68), Expect = 5.7
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 313 FGTPEQLKYLVDECHKAGL 331
+GT Q + H AG+
Sbjct: 78 YGTKAQYLQAIQAAHAAGM 96
Score = 30.2 bits (68), Expect = 5.7
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 332 FGTPEQLKYLVDECHKAGL 350
+GT Q + H AG+
Sbjct: 78 YGTKAQYLQAIQAAHAAGM 96
Score = 30.2 bits (68), Expect = 5.7
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 351 FGTPEQLKYLVDECHKAGL 369
+GT Q + H AG+
Sbjct: 78 YGTKAQYLQAIQAAHAAGM 96
Score = 30.2 bits (68), Expect = 5.7
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 370 FGTPEQLKYLVDECHKAGL 388
+GT Q + H AG+
Sbjct: 78 YGTKAQYLQAIQAAHAAGM 96
Score = 30.2 bits (68), Expect = 5.7
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 389 FGTPEQLKYLVDECHKAGL 407
+GT Q + H AG+
Sbjct: 78 YGTKAQYLQAIQAAHAAGM 96
Score = 30.2 bits (68), Expect = 5.7
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 408 FGTPEQLKYLVDECHKAGL 426
+GT Q + H AG+
Sbjct: 78 YGTKAQYLQAIQAAHAAGM 96
Score = 30.2 bits (68), Expect = 5.7
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 427 FGTPEQLKYLVDECHKAGL 445
+GT Q + H AG+
Sbjct: 78 YGTKAQYLQAIQAAHAAGM 96
Score = 30.2 bits (68), Expect = 5.7
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 446 FGTPEQLKYLVDECHKAGL 464
+GT Q + H AG+
Sbjct: 78 YGTKAQYLQAIQAAHAAGM 96
Score = 30.2 bits (68), Expect = 5.7
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 465 FGTPEQLKYLVDECHKAGL 483
+GT Q + H AG+
Sbjct: 78 YGTKAQYLQAIQAAHAAGM 96
Score = 30.2 bits (68), Expect = 5.7
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 484 FGTPEQLKYLVDECHKAGL 502
+GT Q + H AG+
Sbjct: 78 YGTKAQYLQAIQAAHAAGM 96
Score = 30.2 bits (68), Expect = 5.7
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 503 FGTPEQLKYLVDECHKAGL 521
+GT Q + H AG+
Sbjct: 78 YGTKAQYLQAIQAAHAAGM 96
Score = 30.2 bits (68), Expect = 5.7
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 522 FGTPEQLKYLVDECHKAGL 540
+GT Q + H AG+
Sbjct: 78 YGTKAQYLQAIQAAHAAGM 96
Score = 30.2 bits (68), Expect = 5.7
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 541 FGTPEQLKYLVDECHKAGL 559
+GT Q + H AG+
Sbjct: 78 YGTKAQYLQAIQAAHAAGM 96
Score = 30.2 bits (68), Expect = 5.7
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 560 FGTPEQLKYLVDECHKAGL 578
+GT Q + H AG+
Sbjct: 78 YGTKAQYLQAIQAAHAAGM 96
Score = 30.2 bits (68), Expect = 5.7
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 579 FGTPEQLKYLVDECHKAGL 597
+GT Q + H AG+
Sbjct: 78 YGTKAQYLQAIQAAHAAGM 96
Score = 30.2 bits (68), Expect = 5.7
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 598 FGTPEQLKYLVDECHKAGL 616
+GT Q + H AG+
Sbjct: 78 YGTKAQYLQAIQAAHAAGM 96
Score = 30.2 bits (68), Expect = 5.7
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 617 FGTPEQLKYLVDECHKAGL 635
+GT Q + H AG+
Sbjct: 78 YGTKAQYLQAIQAAHAAGM 96
Score = 30.2 bits (68), Expect = 5.7
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 636 FGTPEQLKYLVDECHKAGL 654
+GT Q + H AG+
Sbjct: 78 YGTKAQYLQAIQAAHAAGM 96
Score = 30.2 bits (68), Expect = 5.7
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 655 FGTPEQLKYLVDECHKAGL 673
+GT Q + H AG+
Sbjct: 78 YGTKAQYLQAIQAAHAAGM 96
Score = 30.2 bits (68), Expect = 5.7
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 674 FGTPEQLKYLVDECHKAGL 692
+GT Q + H AG+
Sbjct: 78 YGTKAQYLQAIQAAHAAGM 96
Score = 30.2 bits (68), Expect = 5.7
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 693 FGTPEQLKYLVDECHKAGL 711
+GT Q + H AG+
Sbjct: 78 YGTKAQYLQAIQAAHAAGM 96
Score = 30.2 bits (68), Expect = 5.7
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 712 FGTPEQLKYLVDECHKAGL 730
+GT Q + H AG+
Sbjct: 78 YGTKAQYLQAIQAAHAAGM 96
Score = 30.2 bits (68), Expect = 5.7
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 731 FGTPEQLKYLVDECHKAGL 749
+GT Q + H AG+
Sbjct: 78 YGTKAQYLQAIQAAHAAGM 96
Score = 30.2 bits (68), Expect = 5.7
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 750 FGTPEQLKYLVDECHKAGL 768
+GT Q + H AG+
Sbjct: 78 YGTKAQYLQAIQAAHAAGM 96
>2fhf_A Pullulanase; multiple domain, beta-alpha-barrel,
alpha-amylase-family, complex with maltotetraose,
hydrolase; HET: GLC; 1.65A {Klebsiella aerogenes} SCOP:
b.1.18.2 b.1.18.2 b.3.1.3 b.71.1.1 c.1.8.1 PDB: 2fh6_A*
2fh8_A* 2fhb_A* 2fhc_A* 2fgz_A*
Length = 1083
Score = 47.7 bits (113), Expect = 2e-05
Identities = 16/100 (16%), Positives = 37/100 (37%), Gaps = 17/100 (17%)
Query: 1039 LKYLVDECHK-AGLYVLLDVVHSH-ASKNVLDGLNEFDGTQACFFHDGPRGTHPLWDSRL 1096
+ ++ + G+ V++DVV++H + D + D ++ +
Sbjct: 584 FRTMIQAIKQDLGMNVIMDVVYNHTNAAGPTDRTSVLDKIVPWYYQRLNE------TTGS 637
Query: 1097 FNYS---------EIEVLRFLLSNLRWYLDEYQFDGFRFD 1127
+ + + +L + +Y+ DGFRFD
Sbjct: 638 VESATCCSDSAPEHRMFAKLIADSLAVWTTDYKIDGFRFD 677
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase,
hydrolase, metal-binding, secreted; 1.40A {Bacillus
amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A
1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A
Length = 483
Score = 46.7 bits (111), Expect = 4e-05
Identities = 22/129 (17%), Positives = 41/129 (31%), Gaps = 21/129 (16%)
Query: 1033 FGTPEQLKYLVDECHKAGLYVLLDVV-------HSHASKNVLDGLNEFDGTQACFFHDGP 1085
+GT +L+ + H + V DVV + ++ + +
Sbjct: 75 YGTKSELQDAIGSLHSRNVQVYGDVVLNHKAGADATEDVTAVEVNPANRNQETSEEYQIK 134
Query: 1086 RGTHPLWDSRLFNYSEIEVLRFLLSNLRWYLDEYQFDGFRFD--GVTSMLYHNHGCGEGF 1143
T + R Y S+ +W+ Y FDG +D S ++ G G+ +
Sbjct: 135 AWTDFRFPGRGNTY----------SDFKWHW--YHFDGADWDESRKISRIFKFRGEGKAW 182
Query: 1144 SGHYDEYFG 1152
G
Sbjct: 183 DWEVSSENG 191
Score = 37.1 bits (86), Expect = 0.034
Identities = 10/32 (31%), Positives = 14/32 (43%)
Query: 1098 NYSEIEVLRFLLSNLRWYLDEYQFDGFRFDGV 1129
+Y +V+ WY +E DGFR D
Sbjct: 202 DYDHPDVVAETKKWGIWYANELSLDGFRIDAA 233
Score = 37.1 bits (86), Expect = 0.039
Identities = 11/62 (17%), Positives = 21/62 (33%), Gaps = 12/62 (19%)
Query: 769 FGTPEQLKYLVDECHKAGLLCFMHVV------------CAAGDFNNWNREEFAYKKLDFG 816
+GT +L+ + H + + VV A + N NR + ++
Sbjct: 75 YGTKSELQDAIGSLHSRNVQVYGDVVLNHKAGADATEDVTAVEVNPANRNQETSEEYQIK 134
Query: 817 KW 818
W
Sbjct: 135 AW 136
Score = 29.4 bits (66), Expect = 9.4
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 123 FGTPEQLKYLVDECHKAGL 141
+GT +L+ + H +
Sbjct: 75 YGTKSELQDAIGSLHSRNV 93
Score = 29.4 bits (66), Expect = 9.4
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 142 FGTPEQLKYLVDECHKAGL 160
+GT +L+ + H +
Sbjct: 75 YGTKSELQDAIGSLHSRNV 93
Score = 29.4 bits (66), Expect = 9.4
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 161 FGTPEQLKYLVDECHKAGL 179
+GT +L+ + H +
Sbjct: 75 YGTKSELQDAIGSLHSRNV 93
Score = 29.4 bits (66), Expect = 9.4
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 180 FGTPEQLKYLVDECHKAGL 198
+GT +L+ + H +
Sbjct: 75 YGTKSELQDAIGSLHSRNV 93
Score = 29.4 bits (66), Expect = 9.4
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 199 FGTPEQLKYLVDECHKAGL 217
+GT +L+ + H +
Sbjct: 75 YGTKSELQDAIGSLHSRNV 93
Score = 29.4 bits (66), Expect = 9.4
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 218 FGTPEQLKYLVDECHKAGL 236
+GT +L+ + H +
Sbjct: 75 YGTKSELQDAIGSLHSRNV 93
Score = 29.4 bits (66), Expect = 9.4
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 237 FGTPEQLKYLVDECHKAGL 255
+GT +L+ + H +
Sbjct: 75 YGTKSELQDAIGSLHSRNV 93
Score = 29.4 bits (66), Expect = 9.4
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 256 FGTPEQLKYLVDECHKAGL 274
+GT +L+ + H +
Sbjct: 75 YGTKSELQDAIGSLHSRNV 93
Score = 29.4 bits (66), Expect = 9.4
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 275 FGTPEQLKYLVDECHKAGL 293
+GT +L+ + H +
Sbjct: 75 YGTKSELQDAIGSLHSRNV 93
Score = 29.4 bits (66), Expect = 9.4
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 294 FGTPEQLKYLVDECHKAGL 312
+GT +L+ + H +
Sbjct: 75 YGTKSELQDAIGSLHSRNV 93
Score = 29.4 bits (66), Expect = 9.4
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 313 FGTPEQLKYLVDECHKAGL 331
+GT +L+ + H +
Sbjct: 75 YGTKSELQDAIGSLHSRNV 93
Score = 29.4 bits (66), Expect = 9.4
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 332 FGTPEQLKYLVDECHKAGL 350
+GT +L+ + H +
Sbjct: 75 YGTKSELQDAIGSLHSRNV 93
Score = 29.4 bits (66), Expect = 9.4
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 351 FGTPEQLKYLVDECHKAGL 369
+GT +L+ + H +
Sbjct: 75 YGTKSELQDAIGSLHSRNV 93
Score = 29.4 bits (66), Expect = 9.4
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 370 FGTPEQLKYLVDECHKAGL 388
+GT +L+ + H +
Sbjct: 75 YGTKSELQDAIGSLHSRNV 93
Score = 29.4 bits (66), Expect = 9.4
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 389 FGTPEQLKYLVDECHKAGL 407
+GT +L+ + H +
Sbjct: 75 YGTKSELQDAIGSLHSRNV 93
Score = 29.4 bits (66), Expect = 9.4
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 408 FGTPEQLKYLVDECHKAGL 426
+GT +L+ + H +
Sbjct: 75 YGTKSELQDAIGSLHSRNV 93
Score = 29.4 bits (66), Expect = 9.4
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 427 FGTPEQLKYLVDECHKAGL 445
+GT +L+ + H +
Sbjct: 75 YGTKSELQDAIGSLHSRNV 93
Score = 29.4 bits (66), Expect = 9.4
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 446 FGTPEQLKYLVDECHKAGL 464
+GT +L+ + H +
Sbjct: 75 YGTKSELQDAIGSLHSRNV 93
Score = 29.4 bits (66), Expect = 9.4
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 465 FGTPEQLKYLVDECHKAGL 483
+GT +L+ + H +
Sbjct: 75 YGTKSELQDAIGSLHSRNV 93
Score = 29.4 bits (66), Expect = 9.4
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 484 FGTPEQLKYLVDECHKAGL 502
+GT +L+ + H +
Sbjct: 75 YGTKSELQDAIGSLHSRNV 93
Score = 29.4 bits (66), Expect = 9.4
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 503 FGTPEQLKYLVDECHKAGL 521
+GT +L+ + H +
Sbjct: 75 YGTKSELQDAIGSLHSRNV 93
Score = 29.4 bits (66), Expect = 9.4
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 522 FGTPEQLKYLVDECHKAGL 540
+GT +L+ + H +
Sbjct: 75 YGTKSELQDAIGSLHSRNV 93
Score = 29.4 bits (66), Expect = 9.4
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 541 FGTPEQLKYLVDECHKAGL 559
+GT +L+ + H +
Sbjct: 75 YGTKSELQDAIGSLHSRNV 93
Score = 29.4 bits (66), Expect = 9.4
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 560 FGTPEQLKYLVDECHKAGL 578
+GT +L+ + H +
Sbjct: 75 YGTKSELQDAIGSLHSRNV 93
Score = 29.4 bits (66), Expect = 9.4
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 579 FGTPEQLKYLVDECHKAGL 597
+GT +L+ + H +
Sbjct: 75 YGTKSELQDAIGSLHSRNV 93
Score = 29.4 bits (66), Expect = 9.4
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 598 FGTPEQLKYLVDECHKAGL 616
+GT +L+ + H +
Sbjct: 75 YGTKSELQDAIGSLHSRNV 93
Score = 29.4 bits (66), Expect = 9.4
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 617 FGTPEQLKYLVDECHKAGL 635
+GT +L+ + H +
Sbjct: 75 YGTKSELQDAIGSLHSRNV 93
Score = 29.4 bits (66), Expect = 9.4
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 636 FGTPEQLKYLVDECHKAGL 654
+GT +L+ + H +
Sbjct: 75 YGTKSELQDAIGSLHSRNV 93
Score = 29.4 bits (66), Expect = 9.4
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 655 FGTPEQLKYLVDECHKAGL 673
+GT +L+ + H +
Sbjct: 75 YGTKSELQDAIGSLHSRNV 93
Score = 29.4 bits (66), Expect = 9.4
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 674 FGTPEQLKYLVDECHKAGL 692
+GT +L+ + H +
Sbjct: 75 YGTKSELQDAIGSLHSRNV 93
Score = 29.4 bits (66), Expect = 9.4
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 693 FGTPEQLKYLVDECHKAGL 711
+GT +L+ + H +
Sbjct: 75 YGTKSELQDAIGSLHSRNV 93
Score = 29.4 bits (66), Expect = 9.4
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 712 FGTPEQLKYLVDECHKAGL 730
+GT +L+ + H +
Sbjct: 75 YGTKSELQDAIGSLHSRNV 93
Score = 29.4 bits (66), Expect = 9.4
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 731 FGTPEQLKYLVDECHKAGL 749
+GT +L+ + H +
Sbjct: 75 YGTKSELQDAIGSLHSRNV 93
Score = 29.4 bits (66), Expect = 9.4
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 750 FGTPEQLKYLVDECHKAGL 768
+GT +L+ + H +
Sbjct: 75 YGTKSELQDAIGSLHSRNV 93
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A
{Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A
1ud6_A 1ud8_A 1ud3_A
Length = 480
Score = 46.4 bits (110), Expect = 5e-05
Identities = 27/158 (17%), Positives = 44/158 (27%), Gaps = 41/158 (25%)
Query: 1013 KFGTPEQLKYLVDEC--------------HKAGLFGTPEQLKYLVDECH----------- 1047
K+GT QL+ + HK G T V+ +
Sbjct: 76 KYGTKAQLERAIGSLKSNDINVYGDVVMNHKMGADFTEAVQAVQVNPTNRWQDISGAYTI 135
Query: 1048 ----------KAGLYVLLDVVHSHAS------KNVLDGLNEFDGTQACFFHDGPRGTHPL 1091
+ Y H + + + + F T + D G +
Sbjct: 136 DAWTGFDFSGRNNAYSDFKWRWFHFNGVDWDQRYQENHIFRFANTNWNWRVDEENGNYDY 195
Query: 1092 WDSRLFNYSEIEVLRFLLSNLRWYLDEYQFDGFRFDGV 1129
++S EV L W+ DE DG+R D +
Sbjct: 196 LLGSNIDFSHPEVQDELKDWGSWFTDELDLDGYRLDAI 233
Score = 44.5 bits (105), Expect = 2e-04
Identities = 20/127 (15%), Positives = 34/127 (26%), Gaps = 19/127 (14%)
Query: 1033 FGTPEQLKYLVDECHKAGLYVLLDVVHSHASKNVLDGLNEFDGTQACFFHDGPRGTHPLW 1092
+GT QL+ + + V DVV +H W
Sbjct: 77 YGTKAQLERAIGSLKSNDINVYGDVVMNHKM----------GADFTEAVQAVQVNPTNRW 126
Query: 1093 DSRLFNYSEIEVLRFLL-------SNLRWYLDEYQFDGFRFDGVTSMLYHNHGCGEGFSG 1145
Y+ F S+ +W + F+G +D + ++
Sbjct: 127 QDISGAYTIDAWTGFDFSGRNNAYSDFKW--RWFHFNGVDWDQRYQENHIFRFANTNWNW 184
Query: 1146 HYDEYFG 1152
DE G
Sbjct: 185 RVDEENG 191
Score = 34.1 bits (78), Expect = 0.32
Identities = 8/38 (21%), Positives = 13/38 (34%), Gaps = 3/38 (7%)
Query: 769 FGTPEQLKYLVDECHKAGLLCFMHVV---CAAGDFNNW 803
+GT QL+ + + + VV DF
Sbjct: 77 YGTKAQLERAIGSLKSNDINVYGDVVMNHKMGADFTEA 114
Score = 31.4 bits (71), Expect = 2.4
Identities = 4/19 (21%), Positives = 8/19 (42%)
Query: 123 FGTPEQLKYLVDECHKAGL 141
+GT QL+ + +
Sbjct: 77 YGTKAQLERAIGSLKSNDI 95
Score = 31.4 bits (71), Expect = 2.4
Identities = 4/19 (21%), Positives = 8/19 (42%)
Query: 142 FGTPEQLKYLVDECHKAGL 160
+GT QL+ + +
Sbjct: 77 YGTKAQLERAIGSLKSNDI 95
Score = 31.4 bits (71), Expect = 2.4
Identities = 4/19 (21%), Positives = 8/19 (42%)
Query: 161 FGTPEQLKYLVDECHKAGL 179
+GT QL+ + +
Sbjct: 77 YGTKAQLERAIGSLKSNDI 95
Score = 31.4 bits (71), Expect = 2.4
Identities = 4/19 (21%), Positives = 8/19 (42%)
Query: 180 FGTPEQLKYLVDECHKAGL 198
+GT QL+ + +
Sbjct: 77 YGTKAQLERAIGSLKSNDI 95
Score = 31.4 bits (71), Expect = 2.4
Identities = 4/19 (21%), Positives = 8/19 (42%)
Query: 199 FGTPEQLKYLVDECHKAGL 217
+GT QL+ + +
Sbjct: 77 YGTKAQLERAIGSLKSNDI 95
Score = 31.4 bits (71), Expect = 2.4
Identities = 4/19 (21%), Positives = 8/19 (42%)
Query: 218 FGTPEQLKYLVDECHKAGL 236
+GT QL+ + +
Sbjct: 77 YGTKAQLERAIGSLKSNDI 95
Score = 31.4 bits (71), Expect = 2.4
Identities = 4/19 (21%), Positives = 8/19 (42%)
Query: 237 FGTPEQLKYLVDECHKAGL 255
+GT QL+ + +
Sbjct: 77 YGTKAQLERAIGSLKSNDI 95
Score = 31.4 bits (71), Expect = 2.4
Identities = 4/19 (21%), Positives = 8/19 (42%)
Query: 256 FGTPEQLKYLVDECHKAGL 274
+GT QL+ + +
Sbjct: 77 YGTKAQLERAIGSLKSNDI 95
Score = 31.4 bits (71), Expect = 2.4
Identities = 4/19 (21%), Positives = 8/19 (42%)
Query: 275 FGTPEQLKYLVDECHKAGL 293
+GT QL+ + +
Sbjct: 77 YGTKAQLERAIGSLKSNDI 95
Score = 31.4 bits (71), Expect = 2.4
Identities = 4/19 (21%), Positives = 8/19 (42%)
Query: 294 FGTPEQLKYLVDECHKAGL 312
+GT QL+ + +
Sbjct: 77 YGTKAQLERAIGSLKSNDI 95
Score = 31.4 bits (71), Expect = 2.4
Identities = 4/19 (21%), Positives = 8/19 (42%)
Query: 313 FGTPEQLKYLVDECHKAGL 331
+GT QL+ + +
Sbjct: 77 YGTKAQLERAIGSLKSNDI 95
Score = 31.4 bits (71), Expect = 2.4
Identities = 4/19 (21%), Positives = 8/19 (42%)
Query: 332 FGTPEQLKYLVDECHKAGL 350
+GT QL+ + +
Sbjct: 77 YGTKAQLERAIGSLKSNDI 95
Score = 31.4 bits (71), Expect = 2.4
Identities = 4/19 (21%), Positives = 8/19 (42%)
Query: 351 FGTPEQLKYLVDECHKAGL 369
+GT QL+ + +
Sbjct: 77 YGTKAQLERAIGSLKSNDI 95
Score = 31.4 bits (71), Expect = 2.4
Identities = 4/19 (21%), Positives = 8/19 (42%)
Query: 370 FGTPEQLKYLVDECHKAGL 388
+GT QL+ + +
Sbjct: 77 YGTKAQLERAIGSLKSNDI 95
Score = 31.4 bits (71), Expect = 2.4
Identities = 4/19 (21%), Positives = 8/19 (42%)
Query: 389 FGTPEQLKYLVDECHKAGL 407
+GT QL+ + +
Sbjct: 77 YGTKAQLERAIGSLKSNDI 95
Score = 31.4 bits (71), Expect = 2.4
Identities = 4/19 (21%), Positives = 8/19 (42%)
Query: 408 FGTPEQLKYLVDECHKAGL 426
+GT QL+ + +
Sbjct: 77 YGTKAQLERAIGSLKSNDI 95
Score = 31.4 bits (71), Expect = 2.4
Identities = 4/19 (21%), Positives = 8/19 (42%)
Query: 427 FGTPEQLKYLVDECHKAGL 445
+GT QL+ + +
Sbjct: 77 YGTKAQLERAIGSLKSNDI 95
Score = 31.4 bits (71), Expect = 2.4
Identities = 4/19 (21%), Positives = 8/19 (42%)
Query: 446 FGTPEQLKYLVDECHKAGL 464
+GT QL+ + +
Sbjct: 77 YGTKAQLERAIGSLKSNDI 95
Score = 31.4 bits (71), Expect = 2.4
Identities = 4/19 (21%), Positives = 8/19 (42%)
Query: 465 FGTPEQLKYLVDECHKAGL 483
+GT QL+ + +
Sbjct: 77 YGTKAQLERAIGSLKSNDI 95
Score = 31.4 bits (71), Expect = 2.4
Identities = 4/19 (21%), Positives = 8/19 (42%)
Query: 484 FGTPEQLKYLVDECHKAGL 502
+GT QL+ + +
Sbjct: 77 YGTKAQLERAIGSLKSNDI 95
Score = 31.4 bits (71), Expect = 2.4
Identities = 4/19 (21%), Positives = 8/19 (42%)
Query: 503 FGTPEQLKYLVDECHKAGL 521
+GT QL+ + +
Sbjct: 77 YGTKAQLERAIGSLKSNDI 95
Score = 31.4 bits (71), Expect = 2.4
Identities = 4/19 (21%), Positives = 8/19 (42%)
Query: 522 FGTPEQLKYLVDECHKAGL 540
+GT QL+ + +
Sbjct: 77 YGTKAQLERAIGSLKSNDI 95
Score = 31.4 bits (71), Expect = 2.4
Identities = 4/19 (21%), Positives = 8/19 (42%)
Query: 541 FGTPEQLKYLVDECHKAGL 559
+GT QL+ + +
Sbjct: 77 YGTKAQLERAIGSLKSNDI 95
Score = 31.4 bits (71), Expect = 2.4
Identities = 4/19 (21%), Positives = 8/19 (42%)
Query: 560 FGTPEQLKYLVDECHKAGL 578
+GT QL+ + +
Sbjct: 77 YGTKAQLERAIGSLKSNDI 95
Score = 31.4 bits (71), Expect = 2.4
Identities = 4/19 (21%), Positives = 8/19 (42%)
Query: 579 FGTPEQLKYLVDECHKAGL 597
+GT QL+ + +
Sbjct: 77 YGTKAQLERAIGSLKSNDI 95
Score = 31.4 bits (71), Expect = 2.4
Identities = 4/19 (21%), Positives = 8/19 (42%)
Query: 598 FGTPEQLKYLVDECHKAGL 616
+GT QL+ + +
Sbjct: 77 YGTKAQLERAIGSLKSNDI 95
Score = 31.4 bits (71), Expect = 2.4
Identities = 4/19 (21%), Positives = 8/19 (42%)
Query: 617 FGTPEQLKYLVDECHKAGL 635
+GT QL+ + +
Sbjct: 77 YGTKAQLERAIGSLKSNDI 95
Score = 31.4 bits (71), Expect = 2.4
Identities = 4/19 (21%), Positives = 8/19 (42%)
Query: 636 FGTPEQLKYLVDECHKAGL 654
+GT QL+ + +
Sbjct: 77 YGTKAQLERAIGSLKSNDI 95
Score = 31.4 bits (71), Expect = 2.4
Identities = 4/19 (21%), Positives = 8/19 (42%)
Query: 655 FGTPEQLKYLVDECHKAGL 673
+GT QL+ + +
Sbjct: 77 YGTKAQLERAIGSLKSNDI 95
Score = 31.4 bits (71), Expect = 2.4
Identities = 4/19 (21%), Positives = 8/19 (42%)
Query: 674 FGTPEQLKYLVDECHKAGL 692
+GT QL+ + +
Sbjct: 77 YGTKAQLERAIGSLKSNDI 95
Score = 31.4 bits (71), Expect = 2.4
Identities = 4/19 (21%), Positives = 8/19 (42%)
Query: 693 FGTPEQLKYLVDECHKAGL 711
+GT QL+ + +
Sbjct: 77 YGTKAQLERAIGSLKSNDI 95
Score = 31.4 bits (71), Expect = 2.4
Identities = 4/19 (21%), Positives = 8/19 (42%)
Query: 712 FGTPEQLKYLVDECHKAGL 730
+GT QL+ + +
Sbjct: 77 YGTKAQLERAIGSLKSNDI 95
Score = 31.4 bits (71), Expect = 2.4
Identities = 4/19 (21%), Positives = 8/19 (42%)
Query: 731 FGTPEQLKYLVDECHKAGL 749
+GT QL+ + +
Sbjct: 77 YGTKAQLERAIGSLKSNDI 95
Score = 31.4 bits (71), Expect = 2.4
Identities = 4/19 (21%), Positives = 8/19 (42%)
Query: 750 FGTPEQLKYLVDECHKAGL 768
+GT QL+ + +
Sbjct: 77 YGTKAQLERAIGSLKSNDI 95
>1ji1_A Alpha-amylase I; beta/alpha barrel, hydrolase; 1.60A
{Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1
c.1.8.1 PDB: 1uh3_A* 2d0f_A* 1izj_A 1uh4_A* 1uh2_A*
2d0g_A* 2d0h_A* 1izk_A
Length = 637
Score = 44.8 bits (106), Expect = 2e-04
Identities = 28/177 (15%), Positives = 47/177 (26%), Gaps = 42/177 (23%)
Query: 1033 FGTPEQLKYLVDECHKAGLY----VLLDVVHSHASKN--VLDGLNEFDGTQACFFHDGPR 1086
FG L+ L+++ H ++LD V +H + D N F A P
Sbjct: 235 FGDNSTLQTLINDIHSTANGPKGYLILDGVFNHTGDSHPWFDKYNNFSSQGAYESQSSPW 294
Query: 1087 GTHPLWDSRLFNY----------------SEIEVLRFLLSNL-----RWYLDEYQFDGFR 1125
+ + + +Y S V + +N + Y DG+R
Sbjct: 295 YNYYTFYTWPDSYASFLGFNSLPKLNYGNSGSAVRGVIYNNSNSVAKTYLNPPYSVDGWR 354
Query: 1126 FDGVTSMLYHNHGCGEGFSGHYDEYFGLNVDTDALIYLMVANKFLHDKYPEIITIAE 1182
D + N G + H + I E
Sbjct: 355 LD-AAQYVDANGNNGSDVTNHQ--------------IWSEFRNAVKGVNSNAAIIGE 396
Score = 36.3 bits (84), Expect = 0.064
Identities = 9/53 (16%), Positives = 20/53 (37%), Gaps = 5/53 (9%)
Query: 769 FGTPEQLKYLVDECHKAGLLCFMHVVCAAGD--FNNWNREEFAYKKLDFGKWE 819
FG L+ L+++ H +++ D FN+ + K + +
Sbjct: 235 FGDNSTLQTLINDIHSTANGPKGYLI---LDGVFNHTGDSHPWFDKYNNFSSQ 284
>1gjw_A Maltodextrin glycosyltransferase; alpha-amylase, maltosyltransferase;
HET: MAL GLC; 2.1A {Thermotoga maritima} SCOP: b.71.1.1
c.1.8.1 PDB: 1gju_A*
Length = 637
Score = 44.4 bits (104), Expect = 2e-04
Identities = 18/92 (19%), Positives = 37/92 (40%), Gaps = 2/92 (2%)
Query: 1033 FGTPEQLKYLVDECHKAGLYVLLDVVHSHASKNVLDGLNEFDGTQACFFHDGPRGTHPLW 1092
F E+ K V+ CH G+ V+LD + A+++ D + T P
Sbjct: 178 FKVDEEFKAFVEACHILGIRVILDFIPRTAARDSDLIREHPDWFYWIKVEELADYTPPRA 237
Query: 1093 DSRLFNYSEIEVLRFLLS--NLRWYLDEYQFD 1122
+ F + + L + + N++ +L ++
Sbjct: 238 EELPFKVPDEDELEIIYNKENVKRHLKKFTLP 269
Score = 31.0 bits (69), Expect = 3.6
Identities = 12/40 (30%), Positives = 19/40 (47%), Gaps = 3/40 (7%)
Query: 769 FGTPEQLKYLVDECHKAGLLCFMHVV--CAAGDFNNWNRE 806
F E+ K V+ CH G+ + + AA D ++ RE
Sbjct: 178 FKVDEEFKAFVEACHILGIRVILDFIPRTAARD-SDLIRE 216
>1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism,
4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio
molitor} SCOP: b.71.1.1 c.1.8.1 PDB: 1clv_A 1tmq_A
1viw_A*
Length = 471
Score = 43.6 bits (102), Expect = 3e-04
Identities = 22/124 (17%), Positives = 35/124 (28%), Gaps = 28/124 (22%)
Query: 1033 FGTPEQLKYLVDECHKAGLYVLLDVVHSHASKNVLDGLNEF-----------DGTQACFF 1081
G + C+ AG+ + +D V +H + G + + F
Sbjct: 71 SGDESAFTDMTRRCNDAGVRIYVDAVINHMTGMNGVGTSGSSADHDGMNYPAVPYGSGDF 130
Query: 1082 H---------DGPRGTH----PLWDSRLFNYSEIEVLRFLLSNLRWYLDEYQFDGFRFDG 1128
H D + L D N V L+ + +D GFR D
Sbjct: 131 HSPCEVNNYQDADNVRNCELVGLRD---LNQGSDYVRGVLIDYMNHMID-LGVAGFRVDA 186
Query: 1129 VTSM 1132
M
Sbjct: 187 AKHM 190
Score = 34.7 bits (79), Expect = 0.23
Identities = 10/60 (16%), Positives = 18/60 (30%), Gaps = 13/60 (21%)
Query: 769 FGTPEQLKYLVDECHKAGLLCFMHVVC-------------AAGDFNNWNREEFAYKKLDF 815
G + C+ AG+ ++ V ++ D + N Y DF
Sbjct: 71 SGDESAFTDMTRRCNDAGVRIYVDAVINHMTGMNGVGTSGSSADHDGMNYPAVPYGSGDF 130
Score = 32.0 bits (72), Expect = 1.3
Identities = 7/30 (23%), Positives = 12/30 (40%)
Query: 113 QSIQYILTGVFGTPEQLKYLVDECHKAGLF 142
Q + YI+ G + C+ AG+
Sbjct: 61 QPVSYIINTRSGDESAFTDMTRRCNDAGVR 90
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like,
antiparallel beta-sheet, greek terminal domain,
extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A
Length = 424
Score = 43.2 bits (102), Expect = 4e-04
Identities = 17/101 (16%), Positives = 33/101 (32%), Gaps = 30/101 (29%)
Query: 1032 LFGTPEQLKYLVDECHKAGLYVLLDVVHSHASKNVLDGLNEFDGTQACFFHDGPRGTHPL 1091
FG+ E L+ K + V+LD+ ++ +N
Sbjct: 77 NFGSKEDFDSLLQSAKKKSIRVILDLTPNYRGENS------------------------- 111
Query: 1092 WDSRLFNYSEIEVLRFLLSNLRWYLDEYQFDGFRFDGVTSM 1132
W F+ V + L ++L DGF+ + ++
Sbjct: 112 W----FSTQVDTVATKVKDALEFWLQA-GVDGFQVRDIENL 147
>3aie_A Glucosyltransferase-SI; beta-alpha-barrels; HET: MES; 2.10A
{Streptococcus mutans} PDB: 3aic_A* 3aib_A*
Length = 844
Score = 43.2 bits (101), Expect = 5e-04
Identities = 8/31 (25%), Positives = 13/31 (41%)
Query: 1033 FGTPEQLKYLVDECHKAGLYVLLDVVHSHAS 1063
+GT + L + H G+ V+ D V
Sbjct: 689 YGTADDLVKAIKALHSKGIKVMADWVPDQMY 719
Score = 33.2 bits (75), Expect = 0.62
Identities = 6/26 (23%), Positives = 10/26 (38%)
Query: 769 FGTPEQLKYLVDECHKAGLLCFMHVV 794
+GT + L + H G+ V
Sbjct: 689 YGTADDLVKAIKALHSKGIKVMADWV 714
Score = 30.5 bits (68), Expect = 4.1
Identities = 5/19 (26%), Positives = 9/19 (47%)
Query: 123 FGTPEQLKYLVDECHKAGL 141
+GT + L + H G+
Sbjct: 689 YGTADDLVKAIKALHSKGI 707
Score = 30.5 bits (68), Expect = 4.1
Identities = 5/19 (26%), Positives = 9/19 (47%)
Query: 142 FGTPEQLKYLVDECHKAGL 160
+GT + L + H G+
Sbjct: 689 YGTADDLVKAIKALHSKGI 707
Score = 30.5 bits (68), Expect = 4.1
Identities = 5/19 (26%), Positives = 9/19 (47%)
Query: 161 FGTPEQLKYLVDECHKAGL 179
+GT + L + H G+
Sbjct: 689 YGTADDLVKAIKALHSKGI 707
Score = 30.5 bits (68), Expect = 4.1
Identities = 5/19 (26%), Positives = 9/19 (47%)
Query: 180 FGTPEQLKYLVDECHKAGL 198
+GT + L + H G+
Sbjct: 689 YGTADDLVKAIKALHSKGI 707
Score = 30.5 bits (68), Expect = 4.1
Identities = 5/19 (26%), Positives = 9/19 (47%)
Query: 199 FGTPEQLKYLVDECHKAGL 217
+GT + L + H G+
Sbjct: 689 YGTADDLVKAIKALHSKGI 707
Score = 30.5 bits (68), Expect = 4.1
Identities = 5/19 (26%), Positives = 9/19 (47%)
Query: 218 FGTPEQLKYLVDECHKAGL 236
+GT + L + H G+
Sbjct: 689 YGTADDLVKAIKALHSKGI 707
Score = 30.5 bits (68), Expect = 4.1
Identities = 5/19 (26%), Positives = 9/19 (47%)
Query: 237 FGTPEQLKYLVDECHKAGL 255
+GT + L + H G+
Sbjct: 689 YGTADDLVKAIKALHSKGI 707
Score = 30.5 bits (68), Expect = 4.1
Identities = 5/19 (26%), Positives = 9/19 (47%)
Query: 256 FGTPEQLKYLVDECHKAGL 274
+GT + L + H G+
Sbjct: 689 YGTADDLVKAIKALHSKGI 707
Score = 30.5 bits (68), Expect = 4.1
Identities = 5/19 (26%), Positives = 9/19 (47%)
Query: 275 FGTPEQLKYLVDECHKAGL 293
+GT + L + H G+
Sbjct: 689 YGTADDLVKAIKALHSKGI 707
Score = 30.5 bits (68), Expect = 4.1
Identities = 5/19 (26%), Positives = 9/19 (47%)
Query: 294 FGTPEQLKYLVDECHKAGL 312
+GT + L + H G+
Sbjct: 689 YGTADDLVKAIKALHSKGI 707
Score = 30.5 bits (68), Expect = 4.1
Identities = 5/19 (26%), Positives = 9/19 (47%)
Query: 313 FGTPEQLKYLVDECHKAGL 331
+GT + L + H G+
Sbjct: 689 YGTADDLVKAIKALHSKGI 707
Score = 30.5 bits (68), Expect = 4.1
Identities = 5/19 (26%), Positives = 9/19 (47%)
Query: 332 FGTPEQLKYLVDECHKAGL 350
+GT + L + H G+
Sbjct: 689 YGTADDLVKAIKALHSKGI 707
Score = 30.5 bits (68), Expect = 4.1
Identities = 5/19 (26%), Positives = 9/19 (47%)
Query: 351 FGTPEQLKYLVDECHKAGL 369
+GT + L + H G+
Sbjct: 689 YGTADDLVKAIKALHSKGI 707
Score = 30.5 bits (68), Expect = 4.1
Identities = 5/19 (26%), Positives = 9/19 (47%)
Query: 370 FGTPEQLKYLVDECHKAGL 388
+GT + L + H G+
Sbjct: 689 YGTADDLVKAIKALHSKGI 707
Score = 30.5 bits (68), Expect = 4.1
Identities = 5/19 (26%), Positives = 9/19 (47%)
Query: 389 FGTPEQLKYLVDECHKAGL 407
+GT + L + H G+
Sbjct: 689 YGTADDLVKAIKALHSKGI 707
Score = 30.5 bits (68), Expect = 4.1
Identities = 5/19 (26%), Positives = 9/19 (47%)
Query: 408 FGTPEQLKYLVDECHKAGL 426
+GT + L + H G+
Sbjct: 689 YGTADDLVKAIKALHSKGI 707
Score = 30.5 bits (68), Expect = 4.1
Identities = 5/19 (26%), Positives = 9/19 (47%)
Query: 427 FGTPEQLKYLVDECHKAGL 445
+GT + L + H G+
Sbjct: 689 YGTADDLVKAIKALHSKGI 707
Score = 30.5 bits (68), Expect = 4.1
Identities = 5/19 (26%), Positives = 9/19 (47%)
Query: 446 FGTPEQLKYLVDECHKAGL 464
+GT + L + H G+
Sbjct: 689 YGTADDLVKAIKALHSKGI 707
Score = 30.5 bits (68), Expect = 4.1
Identities = 5/19 (26%), Positives = 9/19 (47%)
Query: 465 FGTPEQLKYLVDECHKAGL 483
+GT + L + H G+
Sbjct: 689 YGTADDLVKAIKALHSKGI 707
Score = 30.5 bits (68), Expect = 4.1
Identities = 5/19 (26%), Positives = 9/19 (47%)
Query: 484 FGTPEQLKYLVDECHKAGL 502
+GT + L + H G+
Sbjct: 689 YGTADDLVKAIKALHSKGI 707
Score = 30.5 bits (68), Expect = 4.1
Identities = 5/19 (26%), Positives = 9/19 (47%)
Query: 503 FGTPEQLKYLVDECHKAGL 521
+GT + L + H G+
Sbjct: 689 YGTADDLVKAIKALHSKGI 707
Score = 30.5 bits (68), Expect = 4.1
Identities = 5/19 (26%), Positives = 9/19 (47%)
Query: 522 FGTPEQLKYLVDECHKAGL 540
+GT + L + H G+
Sbjct: 689 YGTADDLVKAIKALHSKGI 707
Score = 30.5 bits (68), Expect = 4.1
Identities = 5/19 (26%), Positives = 9/19 (47%)
Query: 541 FGTPEQLKYLVDECHKAGL 559
+GT + L + H G+
Sbjct: 689 YGTADDLVKAIKALHSKGI 707
Score = 30.5 bits (68), Expect = 4.1
Identities = 5/19 (26%), Positives = 9/19 (47%)
Query: 560 FGTPEQLKYLVDECHKAGL 578
+GT + L + H G+
Sbjct: 689 YGTADDLVKAIKALHSKGI 707
Score = 30.5 bits (68), Expect = 4.1
Identities = 5/19 (26%), Positives = 9/19 (47%)
Query: 579 FGTPEQLKYLVDECHKAGL 597
+GT + L + H G+
Sbjct: 689 YGTADDLVKAIKALHSKGI 707
Score = 30.5 bits (68), Expect = 4.1
Identities = 5/19 (26%), Positives = 9/19 (47%)
Query: 598 FGTPEQLKYLVDECHKAGL 616
+GT + L + H G+
Sbjct: 689 YGTADDLVKAIKALHSKGI 707
Score = 30.5 bits (68), Expect = 4.1
Identities = 5/19 (26%), Positives = 9/19 (47%)
Query: 617 FGTPEQLKYLVDECHKAGL 635
+GT + L + H G+
Sbjct: 689 YGTADDLVKAIKALHSKGI 707
Score = 30.5 bits (68), Expect = 4.1
Identities = 5/19 (26%), Positives = 9/19 (47%)
Query: 636 FGTPEQLKYLVDECHKAGL 654
+GT + L + H G+
Sbjct: 689 YGTADDLVKAIKALHSKGI 707
Score = 30.5 bits (68), Expect = 4.1
Identities = 5/19 (26%), Positives = 9/19 (47%)
Query: 655 FGTPEQLKYLVDECHKAGL 673
+GT + L + H G+
Sbjct: 689 YGTADDLVKAIKALHSKGI 707
Score = 30.5 bits (68), Expect = 4.1
Identities = 5/19 (26%), Positives = 9/19 (47%)
Query: 674 FGTPEQLKYLVDECHKAGL 692
+GT + L + H G+
Sbjct: 689 YGTADDLVKAIKALHSKGI 707
Score = 30.5 bits (68), Expect = 4.1
Identities = 5/19 (26%), Positives = 9/19 (47%)
Query: 693 FGTPEQLKYLVDECHKAGL 711
+GT + L + H G+
Sbjct: 689 YGTADDLVKAIKALHSKGI 707
Score = 30.5 bits (68), Expect = 4.1
Identities = 5/19 (26%), Positives = 9/19 (47%)
Query: 712 FGTPEQLKYLVDECHKAGL 730
+GT + L + H G+
Sbjct: 689 YGTADDLVKAIKALHSKGI 707
Score = 30.5 bits (68), Expect = 4.1
Identities = 5/19 (26%), Positives = 9/19 (47%)
Query: 731 FGTPEQLKYLVDECHKAGL 749
+GT + L + H G+
Sbjct: 689 YGTADDLVKAIKALHSKGI 707
Score = 30.5 bits (68), Expect = 4.1
Identities = 5/19 (26%), Positives = 9/19 (47%)
Query: 750 FGTPEQLKYLVDECHKAGL 768
+GT + L + H G+
Sbjct: 689 YGTADDLVKAIKALHSKGI 707
>3ucq_A Amylosucrase; thermostability, amylose synthesis, sucrose
isomerization, beta/alpha-barrel, carbohydrate binding,
transferase; 1.97A {Deinococcus geothermalis} PDB:
3uer_A*
Length = 655
Score = 43.0 bits (101), Expect = 6e-04
Identities = 25/193 (12%), Positives = 51/193 (26%), Gaps = 61/193 (31%)
Query: 1033 FGTPEQLKYLVDECHKAGLYVLLDVVHSHAS------KNVLDGLNEF--------DGTQA 1078
GT + L L G+ ++LD+V +H + + G ++ D
Sbjct: 157 LGTMDDLSALARALRGRGISLVLDLVLNHVAREHAWAQKARAGDPKYRAYFHLFPDRRGP 216
Query: 1079 CFFHDGPRGTHPL-------WDSRL------------------FNYSEIEVLRFLLSNLR 1113
F P WD + N++ +V + +
Sbjct: 217 DAFEATLPEIFPDFAPGNFSWDEEIGEGEGGWVWTTFNSYQWDLNWANPDVFLEFVDIIL 276
Query: 1114 WYLDEYQFDGFRFDGVTSMLYHNHGCGEGFSGHYDEYFGLNV----DTDALIYLMVANKF 1169
+ + + FR D + + + G + + L +
Sbjct: 277 YLANR-GVEVFRLDAIAFIW---------------KRLGTDCQNQPEVHHLTRAL--RAA 318
Query: 1170 LHDKYPEIITIAE 1182
P + AE
Sbjct: 319 ARIVAPAVAFKAE 331
>1hx0_A Alpha amylase (PPA); inhibitor, carbohydrate, pancreas, hydrolase;
HET: GLC AC1 BGC MAL; 1.38A {Sus scrofa} SCOP: b.71.1.1
c.1.8.1 PDB: 1wo2_A* 1ua3_A* 1kxq_A 1kxt_A 1kxv_A 1jfh_A*
1vah_A* 1ppi_A* 3l2m_A* 3l2l_A* 1dhk_A* 1ose_A* 1pig_A*
1pif_A* 1bvn_P 3oli_A* 3old_A* 3olg_A* 3ole_A* 3ij8_A*
...
Length = 496
Score = 41.3 bits (96), Expect = 0.002
Identities = 25/134 (18%), Positives = 37/134 (27%), Gaps = 38/134 (28%)
Query: 1033 FGTPEQLKYLVDECHKAGLYVLLDVVHSH-------------ASKNVLDGLNEFDGT--Q 1077
G + + +V C+ G+ + +D V +H G EF
Sbjct: 73 SGNENEFRDMVTRCNNVGVRIYVDAVINHMCGSGAAAGTGTTCGSYCNPGNREFPAVPYS 132
Query: 1078 ACFFHDGPRGTH-------------------PLWDSRLFNYSEIEVLRFLLSNLRWYLDE 1118
A F+DG T L D + V + L +D
Sbjct: 133 AWDFNDGKCKTASGGIESYNDPYQVRDCQLVGLLD---LALEKDYVRSMIADYLNKLID- 188
Query: 1119 YQFDGFRFDGVTSM 1132
GFR D M
Sbjct: 189 IGVAGFRIDASKHM 202
Score = 32.5 bits (73), Expect = 1.1
Identities = 8/53 (15%), Positives = 16/53 (30%), Gaps = 2/53 (3%)
Query: 769 FGTPEQLKYLVDECHKAGLLCFMHVVC--AAGDFNNWNREEFAYKKLDFGKWE 819
G + + +V C+ G+ ++ V G + G E
Sbjct: 73 SGNENEFRDMVTRCNNVGVRIYVDAVINHMCGSGAAAGTGTTCGSYCNPGNRE 125
Score = 30.9 bits (69), Expect = 3.1
Identities = 7/30 (23%), Positives = 13/30 (43%)
Query: 113 QSIQYILTGVFGTPEQLKYLVDECHKAGLF 142
Q + Y L G + + +V C+ G+
Sbjct: 63 QPVSYKLCTRSGNENEFRDMVTRCNNVGVR 92
>3czg_A Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC; 1.80A {Xanthomonas
axonopodis PV} PDB: 3cze_A* 3czl_A* 3czk_A* 2wpg_A
Length = 644
Score = 41.4 bits (97), Expect = 0.002
Identities = 26/186 (13%), Positives = 47/186 (25%), Gaps = 51/186 (27%)
Query: 1033 FGTPEQLKYLVDECHKAGLYVLLDVVHSHAS------KNVLDGLNEF--------DGTQA 1078
G+ + L L +AG+ + D V +H + + G + D T
Sbjct: 152 LGSNDDLVALTSRLREAGISLCADFVLNHTADDHAWAQAARAGDARYLDYYHHFADRTVP 211
Query: 1079 CFFHDGPR----GTHPL---WDSRL--------------FNYSEIEVLRFLLSNLRWYLD 1117
+ T P W N+S V + + +
Sbjct: 212 DRYEATLGQVFPHTAPGNFTWVDDTAQWMWTTFYPYQWDLNWSNPAVFGDMALAMLRLAN 271
Query: 1118 EYQFDGFRFDGVTSML-YHNHGCGEGFSGHYDEYFGLNVDTDALIYLMVANKFLHDKYPE 1176
+ FR D + C + E L+ + P
Sbjct: 272 L-GVEAFRLDSTAYLWKRIGTDC-----MNQSE-------AHTLLVAL--RAVTDIVAPA 316
Query: 1177 IITIAE 1182
++ AE
Sbjct: 317 VVMKAE 322
>1g5a_A Amylosucrase; glycosyltransferase, glycoside hydrolase, (beta-alpha)8
barrel; HET: EPE; 1.40A {Neisseria polysaccharea} SCOP:
b.71.1.1 c.1.8.1 PDB: 1jg9_A* 1mw1_A* 1mw2_A* 1mw3_A*
3ueq_A* 1jgi_A* 1mvy_A* 1mw0_A* 1s46_A* 1zs2_A*
Length = 628
Score = 39.4 bits (92), Expect = 0.008
Identities = 32/191 (16%), Positives = 54/191 (28%), Gaps = 62/191 (32%)
Query: 1033 FGTPEQLKYLVDECHKAGLYVLLDVVHSHAS------KNVLDGLNEFDGTQACFFHDGPR 1086
GT L+ ++ H+AG+ ++D + +H S + G FD ++ R
Sbjct: 159 LGTIGDLREVIAALHEAGISAVVDFIFNHTSNEHEWAQRCAAGDPLFDN---FYYIFPDR 215
Query: 1087 ---------------GTHPL---WDSR------LF-------NYSEIEVLRFLLSNLRWY 1115
HP F NYS V R + + +
Sbjct: 216 RMPDQYDRTLREIFPDQHPGGFSQLEDGRWVWTTFNSFQWDLNYSNPWVFRAMAGEMLFL 275
Query: 1116 LDEYQFDGFRFDGVTSMLYHNHGCGEGFSGHYDEYFGLNV----DTDALIYLMVANKFLH 1171
+ D R D V + + G + ALI N +
Sbjct: 276 ANL-GVDILRMDAVAFIW---------------KQMGTSCENLPQAHALIRAF--NAVMR 317
Query: 1172 DKYPEIITIAE 1182
P + +E
Sbjct: 318 IAAPAVFFKSE 328
>1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A
{Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1
Length = 488
Score = 38.4 bits (90), Expect = 0.015
Identities = 11/31 (35%), Positives = 19/31 (61%)
Query: 1033 FGTPEQLKYLVDECHKAGLYVLLDVVHSHAS 1063
+GT E LV+ H+ G+ V++D+ +H S
Sbjct: 78 YGTLEDFHKLVEAAHQRGIKVIIDLPINHTS 108
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose,
(beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga
maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Length = 441
Score = 37.5 bits (88), Expect = 0.027
Identities = 8/32 (25%), Positives = 18/32 (56%)
Query: 1032 LFGTPEQLKYLVDECHKAGLYVLLDVVHSHAS 1063
+G+ + K +++ H +G+ V+LD+ H
Sbjct: 65 EYGSEREFKEMIEAFHDSGIKVVLDLPIHHTG 96
>1iv8_A Maltooligosyl trehalose synthase; beta alpha barrel, intramolecular
transglucosylation, isomerase; HET: MLZ MLY; 1.90A
{Sulfolobus acidocaldarius} SCOP: b.71.1.1 c.1.8.1
Length = 720
Score = 37.6 bits (87), Expect = 0.033
Identities = 8/31 (25%), Positives = 18/31 (58%)
Query: 1033 FGTPEQLKYLVDECHKAGLYVLLDVVHSHAS 1063
G ++ + L++ H GL ++ D+V +H +
Sbjct: 62 LGGEKEYRRLIETAHTIGLGIIQDIVPNHMA 92
>3hje_A 704AA long hypothetical glycosyltransferase; trehalose biosynthesis,
maltooligoside trehalose synthase (M family 13 glycoside
hydrolases; 1.90A {Sulfolobus tokodaii str}
Length = 704
Score = 37.0 bits (86), Expect = 0.042
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 1033 FGTPEQLKYLVDECHKAGLYVLLDVVHSHAS 1063
G E+ L+DE GL ++ D+V +H +
Sbjct: 60 LGGEEEYIRLIDEAKSKGLGIIQDIVPNHMA 90
>2zic_A Dextran glucosidase; TIM barrel, (beta/alpha)8-barrel, hydrolase;
2.20A {Streptococcus mutans} PDB: 2zid_A*
Length = 543
Score = 36.0 bits (84), Expect = 0.077
Identities = 8/31 (25%), Positives = 17/31 (54%)
Query: 1033 FGTPEQLKYLVDECHKAGLYVLLDVVHSHAS 1063
FG + L+ + G+ +++D+V +H S
Sbjct: 75 FGNMADMDNLLTQAKMRGIKIIMDLVVNHTS 105
>3k8k_A Alpha-amylase, SUSG; alpha8/BETA8 barrel, CBM, beta-sandwich,
membrane protein; 2.20A {Bacteroides thetaiotaomicron}
PDB: 3k8m_A* 3k8l_A*
Length = 669
Score = 36.3 bits (84), Expect = 0.077
Identities = 11/31 (35%), Positives = 14/31 (45%)
Query: 1033 FGTPEQLKYLVDECHKAGLYVLLDVVHSHAS 1063
GT LV E H G+ + LD V +H
Sbjct: 103 LGTESDFDRLVTEAHNRGIKIYLDYVMNHTG 133
>1uok_A Oligo-1,6-glucosidase; sugar degradation, hydrolase, TIM-barrel
glycosidase; 2.00A {Bacillus cereus} SCOP: b.71.1.1
c.1.8.1
Length = 558
Score = 36.0 bits (84), Expect = 0.087
Identities = 11/31 (35%), Positives = 19/31 (61%)
Query: 1033 FGTPEQLKYLVDECHKAGLYVLLDVVHSHAS 1063
FGT E L+ E H+ + +++D+V +H S
Sbjct: 75 FGTMEDWDELLHEMHERNMKLMMDLVVNHTS 105
>2ze0_A Alpha-glucosidase; TIM barrel, glucoside hydrolase, extremophIle,
hydrolase; 2.00A {Geobacillus SP}
Length = 555
Score = 36.0 bits (84), Expect = 0.094
Identities = 13/31 (41%), Positives = 20/31 (64%)
Query: 1033 FGTPEQLKYLVDECHKAGLYVLLDVVHSHAS 1063
FGT + L+ + H+ GL V+LD+V +H S
Sbjct: 75 FGTMDDFDELLAQAHRRGLKVILDLVINHTS 105
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
photosynthetic reaction center, peripheral antenna;
HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1
Length = 154
Score = 34.2 bits (77), Expect = 0.10
Identities = 11/45 (24%), Positives = 17/45 (37%), Gaps = 16/45 (35%)
Query: 49 EKHEGGIEKFTTSYNKYGIHVQADNSVRCFEWAPSAQQLYLTGNV 93
EK ++K S Y AD+S AP+ L + +
Sbjct: 18 EKQA--LKKLQASLKLY-----ADDS------APA---LAIKATM 46
>3aj7_A Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydrolase; 1.30A
{Saccharomyces cerevisiae} PDB: 3a4a_A* 3a47_A 3axi_A*
3axh_A*
Length = 589
Score = 35.6 bits (83), Expect = 0.10
Identities = 11/31 (35%), Positives = 19/31 (61%)
Query: 1033 FGTPEQLKYLVDECHKAGLYVLLDVVHSHAS 1063
+GT E L+++ HK G+ + D+V +H S
Sbjct: 84 YGTNEDCFALIEKTHKLGMKFITDLVINHCS 114
>1m53_A Isomaltulose synthase; klebsiella SP. LX3, sucrose isomerization,
isomerase; 2.20A {Klebsiella SP} SCOP: b.71.1.1 c.1.8.1
Length = 570
Score = 35.6 bits (83), Expect = 0.11
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 1033 FGTPEQLKYLVDECHKAGLYVLLDVVHSHAS 1063
+GT E LV E K + +++DVV +H S
Sbjct: 89 YGTMEDFDSLVAEMKKRNMRLMIDVVINHTS 119
>1zja_A Trehalulose synthase; sucrose isomerase, alpha-amylase family,
(beta/alpha)8 barrel; 1.60A {Pseudomonas mesoacidophila}
PDB: 1zjb_A 2pwd_A* 2pwh_A 2pwg_A 2pwe_A* 2pwf_A* 3gbe_A*
3gbd_A*
Length = 557
Score = 35.6 bits (83), Expect = 0.11
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 1033 FGTPEQLKYLVDECHKAGLYVLLDVVHSHAS 1063
+GT E L+ E K G+ +++DVV +H+S
Sbjct: 76 YGTMEDFDRLMAELKKRGMRLMVDVVINHSS 106
>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5,
thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP:
c.1.8.3 PDB: 2man_A* 3man_A*
Length = 302
Score = 34.8 bits (80), Expect = 0.17
Identities = 6/27 (22%), Positives = 12/27 (44%), Gaps = 1/27 (3%)
Query: 1036 PEQLKYLVDECHKAGLYVLLDVVHSHA 1062
P + ++ C + L +L+ VH
Sbjct: 64 PSDVANVISLCKQNRLICMLE-VHDTT 89
>1ceo_A Cellulase CELC; glycosyl hydrolase, family A/5 of glycosyl
hydrolases, cellulose degradation; 1.90A {Clostridium
thermocellum} SCOP: c.1.8.3 PDB: 1cen_A 1cec_A
Length = 343
Score = 34.9 bits (80), Expect = 0.17
Identities = 15/76 (19%), Positives = 26/76 (34%), Gaps = 21/76 (27%)
Query: 1036 PEQLKYL---VDECHKAGLYVLLDVVHSHASKNVLDGLNEFDGTQACFFHDGPRGTHPLW 1092
+ L Y+ ++ C K L ++LD+ H G + F P
Sbjct: 65 EDGLSYIDRCLEWCKKYNLGLVLDMHH-------------APGYRFQDFKTSTLFEDPNQ 111
Query: 1093 DSRLFNYSEIEVLRFL 1108
R +++ RFL
Sbjct: 112 QKRF-----VDIWRFL 122
>3qr3_A Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A {Hypocrea jecorina}
Length = 340
Score = 34.6 bits (79), Expect = 0.18
Identities = 14/119 (11%), Positives = 33/119 (27%), Gaps = 28/119 (23%)
Query: 949 WNMGNIVHTLTNRRYMEKTVAYAESHDQALVGDKTIAFWLMDKEMYT-----HMSTLSDP 1003
++ G + + + G + ++ + M L +
Sbjct: 13 FDFGCTTDGTCVTSKVYPPLKNFTGSNNYPDGIGQMQHFVNEDGMTIFRLPVGWQYLVNN 72
Query: 1004 SLIIDRACEKFGTPEQLKYLVDECHKAGLFGTPEQLKYLVDECHKAGLYVLLDVVHSHA 1062
+L +D + + LV C G Y ++D +H++A
Sbjct: 73 NL---------------GGNLDS---TSI----SKYDQLVQGCLSLGAYCIVD-IHNYA 108
>2cks_A Endoglucanase E-5; carbohydrate metabolism, polysaccharide
degradation, glycoside hydrolase family 5, hydrolase,
glycosidase; HET: BEN; 1.6A {Thermobifida fusca} PDB:
2ckr_A*
Length = 306
Score = 34.4 bits (79), Expect = 0.20
Identities = 9/37 (24%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 1037 EQLKYLVDECHKAGLYVLLDVVHSHASKNVLDGLNEF 1073
+++ L+D GLYV++D H + L+
Sbjct: 80 DRMHQLIDMATARGLYVIVD-WHILTPGDPHYNLDRA 115
>3vmn_A Dextranase; TIM barrel, immunoglobrin fold, greek-KEY-motif,
glycoside H family 66, hydrolase; 1.60A {Streptococcus
mutans} PDB: 3vmo_A* 3vmp_A*
Length = 643
Score = 33.7 bits (76), Expect = 0.51
Identities = 26/178 (14%), Positives = 50/178 (28%), Gaps = 29/178 (16%)
Query: 1039 LKYLVDECHKAGLYVLLDVVHSHASKNVLDGLNEFD---------GTQACFFHDGPRGTH 1089
+K LV+ H+ G +L + + N L + + Q
Sbjct: 193 VKALVNRVHQTGAVAMLYNMILAQNANETAVLPDTEYIYNYETGGYGQNGQVMTYSIDDK 252
Query: 1090 PLWDSRLFNYSEIEVLRFLLSNLRWYLDEYQFDGFRFDGVTSMLYHNHGCGEGFSGHYDE 1149
P +N ++ + + + FDG++ D + G +
Sbjct: 253 P--LQYYYNPLSKSWQNYISNAMAQAMKNGGFDGWQGDTI------------GDNRVLSH 298
Query: 1150 YFGLNVDTDALIYLMVA-NKFLHD---KYPEIITIAEDVSGMPASCRPVTEGGTGFDY 1203
+ D L +FL+ K P+ DV+G + Y
Sbjct: 299 NQKDSRDIAHSFMLSDVYAEFLNKMKEKLPQYYLTLNDVNGENI--SKLANSKQDVIY 354
>4f7a_A Putative uncharacterized protein; TPR-like protein, mucin O-glycan
binding, structural genomic center for structural
genomics, JCSG; HET: PGE; 1.85A {Bacteroides vulgatus}
Length = 511
Score = 33.3 bits (75), Expect = 0.51
Identities = 33/232 (14%), Positives = 70/232 (30%), Gaps = 29/232 (12%)
Query: 1060 SHASKNVLDGLNEFDGTQACFFHDGPRGTHPLWDSRLFNYSEIEVLRFLLSNLRWYLDEY 1119
S A K + + + + G +PL + + E + + S L Y D
Sbjct: 221 SEAQKALENSYGVIESSDENIQISGKGYQNPLA--GVAGWGETYMGATIASVLNGYEDPR 278
Query: 1120 QFDGFRFDGVTSMLYHNHGCGEGFSG------HYDEYFGLN---VDTDALIYLMVA--NK 1168
+ + G +G +Y Y +N + L+ A
Sbjct: 279 ISIYYNPATLAEHTEEYLGVPQGVYAKDGDPNYYQSYSFINTQTITASTPAVLLTAAETW 338
Query: 1169 FLHDKYPEIITIAEDVS-------GMPASCRPVTEGGTGFDYRLVSLEGSALSALFDAAM 1221
FL + ++ S G+ S G L S + A
Sbjct: 339 FLRAEASLRGINPKNESAKQCYEAGVQTSFSQW--GAGDASLYLTSKGKPT--DYINYAA 394
Query: 1222 NTTEERFKWLSADPGYVSTKHEGDKV--IIFERAGLLFAFNFNGTQSFTDYR 1271
++ ++ P + ++ +++ II ++ A G +++ + R
Sbjct: 395 GPGKDMKALITTTPNFDDAVNQEEQLEKIITQK---WIACWPEGMEAWAEQR 443
>3ttq_A Dextransucrase; (beta/alpha)8 barrel, transferase; HET: PG4; 1.90A
{Leuconostoc mesenteroides} PDB: 3tto_A*
Length = 1108
Score = 33.5 bits (76), Expect = 0.63
Identities = 9/28 (32%), Positives = 14/28 (50%)
Query: 1034 GTPEQLKYLVDECHKAGLYVLLDVVHSH 1061
GT L+ + H A + V+ DVV +
Sbjct: 910 GTDGDLRATIQALHHANMQVMADVVDNQ 937
>3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose
binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A
3pzv_A
Length = 327
Score = 32.9 bits (75), Expect = 0.64
Identities = 8/37 (21%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 1037 EQLKYLVDECHKAGLYVLLDVVHSHASKNVLDGLNEF 1073
++K V+ + G+YV++D H N +
Sbjct: 105 NKVKEAVEAAKELGIYVIID-WHILNDGNPNQNKEKA 140
>3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus}
Length = 345
Score = 33.0 bits (75), Expect = 0.66
Identities = 3/37 (8%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 1037 EQLKYLVDECHKAGLYVLLDVVHSHASKNVLDGLNEF 1073
+ ++ +++ + + +++ VH ++ L+
Sbjct: 87 DTVREVIELAEQNKMVAVVE-VHDATGRDSRSDLDRA 122
>1wky_A Endo-beta-1,4-mannanase; TIM barrel, catalytic domain, CBM,
hydrolase; 1.65A {Bacillus SP} SCOP: b.18.1.31 c.1.8.3
Length = 464
Score = 33.1 bits (75), Expect = 0.67
Identities = 7/37 (18%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 1037 EQLKYLVDECHKAGLYVLLDVVHSHASKNVLDGLNEF 1073
+ ++ L+ L +L+ VH + + LN
Sbjct: 72 QTVRNLISLAEDNNLVAVLE-VHDATGYDSIASLNRA 107
>1g01_A Endoglucanase; alpha/beta barrel, TIM barrel, hydrolase; 1.90A
{Bacillus SP} SCOP: c.1.8.3 PDB: 1g0c_A*
Length = 364
Score = 32.7 bits (74), Expect = 0.70
Identities = 15/66 (22%), Positives = 30/66 (45%), Gaps = 7/66 (10%)
Query: 1037 EQLKYLVDECHKAGLYVLLDVVHSHA----SKNVLDGLNEFDGTQACFFHDGPRGTHPLW 1092
+ + ++ + +YV++D H HA +V G +F A + D P+ + +W
Sbjct: 90 DLVYEGIELAFEHDMYVIVD-WHVHAPGDPRADVYSGAYDFFEEIADHYKDHPKNHYIIW 148
Query: 1093 DSRLFN 1098
+ L N
Sbjct: 149 E--LAN 152
>2p9b_A Possible prolidase; protein structure initiative II, PSI-2,
amidohydrolase, structural genomics; 1.70A
{Bifidobacterium longum NCC2705} SCOP: b.92.1.10 c.1.9.17
Length = 458
Score = 32.8 bits (75), Expect = 0.74
Identities = 10/36 (27%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
Query: 1035 TPEQLKYLVDECHKAGLYVLLDVVHSHASKNVLDGL 1070
+ EQ++ + DE H+ G+ V H+ + + V L
Sbjct: 225 SVEQMRAICDEAHQYGVIV---GAHAQSPEGVRRSL 257
Score = 30.1 bits (68), Expect = 4.9
Identities = 19/87 (21%), Positives = 31/87 (35%), Gaps = 17/87 (19%)
Query: 713 GTPEQLKYLVDECHKAGLFGTPEQLKYLVD-ECHKAGLFGTPEQLKYLVDECHKAGLFGT 771
GTPE+ + V + KAG +K A G + +
Sbjct: 182 GTPEEARTAVAQNLKAG----VNAIKIAATGGVTDAQEIGEAGSPQM------------S 225
Query: 772 PEQLKYLVDECHKAGLLCFMHVVCAAG 798
EQ++ + DE H+ G++ H G
Sbjct: 226 VEQMRAICDEAHQYGVIVGAHAQSPEG 252
>2wyh_A Alpha-mannosidase; hydrolase, glycosidase, glycoside hydrolase; 1.90A
{Streptococcus pyogenes} PDB: 2wyi_A*
Length = 923
Score = 32.9 bits (74), Expect = 0.90
Identities = 33/173 (19%), Positives = 55/173 (31%), Gaps = 15/173 (8%)
Query: 976 QALVGDKTI---AFWLMDKEMYTHMSTLSDPSLIIDRACEKFGTPEQLKYLVDECHKAGL 1032
+ + + F+++ + T + LI C+++G L Y D
Sbjct: 95 RQAIASGKLRIGPFYILQDDFLTSSESNVRNMLIGKEDCDRWGASVPLGYFPDT------ 148
Query: 1033 FGTPEQLKYLVDECHKAGL--YVLLDVVHSHASKNVLDGLNEFDGTQACFFHDGPRGTHP 1090
FG Q L KAGL + N +D ++ + GP +
Sbjct: 149 FGNMGQTPQL---MLKAGLQAAAFGRGIRPTGFNNQVDTSEKYSSQFSEISWQGPDNSRI 205
Query: 1091 LWDSRLFNYSEIEVLRFLLSNLRWYLDEYQFDGFRFDGVTSMLYHNHGCGEGF 1143
L YS + + R + D+ D RF T L +GC
Sbjct: 206 LGLLFANWYSNGNEIPTTEAEARLFWDKKLADAERF-ASTKHLLMMNGCDHQP 257
>1vjz_A Endoglucanase; TM1752, structural genomics, JCSG, PSI, prote
structure initiative, joint center for structural
genomics; 2.05A {Thermotoga maritima} SCOP: c.1.8.3
Length = 341
Score = 32.2 bits (73), Expect = 1.0
Identities = 3/38 (7%), Positives = 16/38 (42%)
Query: 1037 EQLKYLVDECHKAGLYVLLDVVHSHASKNVLDGLNEFD 1074
E++ ++ K G+++ + + + + + +
Sbjct: 77 EKIDRVIFWGEKYGIHICISLHRAPGYSVNKEVEEKTN 114
>3feq_A Putative amidohydrolase; unknown source, sargasso SEA, structural
genomics, protein structure initiative, PSI; 2.63A
{Unidentified} PDB: 3lwy_A* 3n2c_A*
Length = 423
Score = 32.3 bits (74), Expect = 1.0
Identities = 7/37 (18%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
Query: 1035 TPEQLKYLVDECHKAGLYVLLDVVHSHASKNVLDGLN 1071
+ ++++ +VDE A YV + H++ + + +
Sbjct: 210 SEDEIRAIVDEAEAANTYV---MAHAYTGRAIARAVR 243
>3v71_A PUF (pumilio/FBF) domain-containing protein 7, CO transcript
evidence; PUF repeats, RNA binding protein-RNA complex;
HET: EPE; 2.90A {Caenorhabditis elegans}
Length = 382
Score = 32.3 bits (73), Expect = 1.0
Identities = 22/132 (16%), Positives = 40/132 (30%), Gaps = 11/132 (8%)
Query: 48 FEKHEGGIEKFTTSYNKYGIHVQADNSVRCFEWAPSAQQLYLTGNVSLTPWSIMEEASLS 107
G +KYG + + + +L S+M +
Sbjct: 165 VHFLSSGDSLMAVCQDKYGCRLVQ----QVIDRLAENPKLPCFKFRIQLLHSLMTCIVRN 220
Query: 108 SIKLIQS------IQYILTGVFGTPEQLKYLVDECHKAGLFGTPEQLKYLVDECHKAGLF 161
+L + IQY++ ++D+C + Q KY A LF
Sbjct: 221 CYRLSSNEFANYVIQYVIKSSGIMEMYRDTIIDKCLL-RNLLSMSQDKYASHVIEGAFLF 279
Query: 162 GTPEQLKYLVDE 173
P L +++E
Sbjct: 280 APPALLHEMMEE 291
>2jep_A Xyloglucanase; family 5, plant cell WALL, hydrolase; 1.4A
{Paenibacillus pabuli} PDB: 2jeq_A*
Length = 395
Score = 32.5 bits (73), Expect = 1.1
Identities = 6/25 (24%), Positives = 15/25 (60%)
Query: 1037 EQLKYLVDECHKAGLYVLLDVVHSH 1061
+++ +VD + GLYV++++
Sbjct: 110 NRIQQVVDYAYNEGLYVIINIHGDG 134
>3gnh_A L-lysine, L-arginine carboxypeptidase CC2672; N-methyl phosphonate
derivative of L- arginine, hydrolase; HET: KCX M3R; 1.70A
{Caulobacter crescentus CB15} PDB: 3mtw_A*
Length = 403
Score = 32.3 bits (74), Expect = 1.1
Identities = 12/37 (32%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Query: 1035 TPEQLKYLVDECHKAGLYVLLDVVHSHASKNVLDGLN 1071
T E++K +VDE H AG+ V H+H + + + +
Sbjct: 205 TYEEMKAVVDEAHMAGIKV---AAHAHGASGIREAVR 238
>3aof_A Endoglucanase; glycosyl hydrolase family 5, cellulase, biofuel,
hyperthermo hydrolase; HET: BMA; 1.29A {Thermotoga
maritima} PDB: 3amg_A* 3amc_A 3amd_A 3mmu_A 3mmw_A
3azs_A* 3azr_A* 3azt_A*
Length = 317
Score = 32.2 bits (73), Expect = 1.2
Identities = 6/29 (20%), Positives = 16/29 (55%)
Query: 1037 EQLKYLVDECHKAGLYVLLDVVHSHASKN 1065
+++ +++ K GL V++++ H N
Sbjct: 74 KRVDEVINGALKRGLAVVINIHHYEELMN 102
>3qho_A Endoglucanase, 458AA long hypothetical endo-1,4-beta-glucanase;
cellulase, catalytic domain, hydrolase; HET: CTT; 1.65A
{Pyrococcus horikoshii} PDB: 3axx_A* 2zum_A 2zun_A*
3qhm_A* 3qhn_A*
Length = 458
Score = 32.1 bits (72), Expect = 1.2
Identities = 6/29 (20%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Query: 1037 EQLKYLVDECHKAGLYVLLDVVHSHASKN 1065
+ ++ ++ + G++VLLD H +
Sbjct: 134 QIMEKIIKKAGDLGIFVLLD-YHRIGCTH 161
>1egz_A Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CLAN GH-A, family
5-2, cellulase; 2.30A {Erwinia chrysanthemi} SCOP:
c.1.8.3
Length = 291
Score = 31.4 bits (71), Expect = 1.6
Identities = 8/37 (21%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 1037 EQLKYLVDECHKAGLYVLLDVVHSHASKNVLDGLNEF 1073
+++ +VD +Y ++ HSH+++N F
Sbjct: 77 AKVERVVDAAIANDMYAIIG-WHSHSAENNRSEAIRF 112
>2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA;
1.40A {Bacillus agaradhaerens} PDB: 2whj_A
Length = 294
Score = 31.3 bits (71), Expect = 1.8
Identities = 2/30 (6%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Query: 1036 PEQLKYLVDECHKAGLYVLLDVVHSHASKN 1065
+ ++ +++ + + +++ VH ++
Sbjct: 63 IDTIREVIELAEQNKMVAVVE-VHDATGRD 91
>2r8c_A Putative amidohydrolase; unknown source, sargasso SEA, structural
genomics, protein structure initiative, PSI; 2.31A
{Unidentified} SCOP: b.92.1.9 c.1.9.18 PDB: 3mkv_A*
Length = 426
Score = 31.2 bits (71), Expect = 2.2
Identities = 6/37 (16%), Positives = 17/37 (45%), Gaps = 3/37 (8%)
Query: 1035 TPEQLKYLVDECHKAGLYVLLDVVHSHASKNVLDGLN 1071
+ ++++ +V E G YV + H++ + +
Sbjct: 213 SEDEIRAIVAEAQGRGTYV---LAHAYTPAAIARAVR 246
>2c0h_A Mannan endo-1,4-beta-mannosidase; hydrolase, signal, TIM alpha/beta
barrel; 1.6A {Mytilus edulis} SCOP: c.1.8.3
Length = 353
Score = 31.2 bits (70), Expect = 2.2
Identities = 0/29 (0%), Positives = 10/29 (34%)
Query: 1037 EQLKYLVDECHKAGLYVLLDVVHSHASKN 1065
++ + + + + + + ++
Sbjct: 91 SDMRAYLHAAQRHNILIFFTLWNGAVKQS 119
>7a3h_A Endoglucanase; hydrolase, cellulose degradation, glycoside H family
5, michaelis complex, SKEW-BOAT, distortion; 0.95A
{Bacillus agaradhaerens} SCOP: c.1.8.3 PDB: 1h2j_A*
1hf6_A* 1ocq_A* 1w3k_A* 1h11_A* 4a3h_A* 5a3h_A* 6a3h_A*
1w3l_A 8a3h_A* 2v38_A* 1qhz_A 1qi0_A* 1e5j_A* 1qi2_A*
1h5v_A* 1a3h_A 2a3h_A* 3a3h_A* 1lf1_A
Length = 303
Score = 31.0 bits (70), Expect = 2.4
Identities = 8/37 (21%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 1037 EQLKYLVDECHKAGLYVLLDVVHSHASKNVLDGLNEF 1073
E++K V+ +YV++D H + + E
Sbjct: 80 EKVKEAVEAAIDLDIYVIID-WHILSDNDPNIYKEEA 115
>3klk_A Glucansucrase; native form, open conformation, multidomain protein,
glycosyltransferase, transferase; 1.65A {Lactobacillus
reuteri} PDB: 3kll_A* 3hz3_A*
Length = 1039
Score = 31.2 bits (70), Expect = 2.6
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 1033 FGTPEQLKYLVDECHKAGLYVLLDVVHSH 1061
+G+ E L+ + HKAGL + D V
Sbjct: 742 YGSDEDLRNALQALHKAGLQAIADWVPDQ 770
>1tvn_A Cellulase, endoglucanase G; glycoside hydrolase, CLAN GH-A, family
5-2; 1.41A {Pseudoalteromonas haloplanktis} SCOP: c.1.8.3
PDB: 1tvp_A*
Length = 293
Score = 30.6 bits (69), Expect = 2.7
Identities = 9/37 (24%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 1037 EQLKYLVDECHKAGLYVLLDVVHSHASKNVLDGLNEF 1073
+L +V+ +YV++D HSH + F
Sbjct: 79 SRLDTVVNAAIAEDMYVIID-FHSHEAHTDQATAVRF 114
>1h4p_A Glucan 1,3-beta-glucosidase I/II; hydrolase, glucan degradation,
hydrolyase, glycosidase; HET: NAG BMA MAN NDG; 1.75A
{Saccharomyces cerevisiae} SCOP: c.1.8.3
Length = 408
Score = 31.0 bits (69), Expect = 2.9
Identities = 13/72 (18%), Positives = 25/72 (34%), Gaps = 14/72 (19%)
Query: 1037 EQLKYLVDECHKAGLYVLLDVVHSHASKNVLDGLNEFDGTQACFFHDGPRGTHPLWDSRL 1096
L + L V +D+ H + G+Q F + G R ++ +
Sbjct: 114 SYLDQAIGWARNNSLKVWVDL---HGAA----------GSQNGFDNSGLRDSYKFLEDSN 160
Query: 1097 FNYSEIEVLRFL 1108
+ I VL ++
Sbjct: 161 LAVT-INVLNYI 171
>3icj_A Uncharacterized metal-dependent hydrolase; structural genomics,
amidohydrolase, PSI-2, protein structur initiative; HET:
KCX; 1.95A {Pyrococcus furiosus} PDB: 3etk_A* 3igh_X*
Length = 534
Score = 31.1 bits (71), Expect = 2.9
Identities = 8/42 (19%), Positives = 16/42 (38%), Gaps = 3/42 (7%)
Query: 758 YLVDECHKAGLFGTPEQLKYLVDECHKAGLLCFMHVVCAAGD 799
Y + L +++ +++ GL +H A GD
Sbjct: 314 YTDNPTTSGELVMNKDEIVEVIERAKPLGLDVAVH---AIGD 352
Score = 29.5 bits (67), Expect = 8.5
Identities = 10/52 (19%), Positives = 18/52 (34%), Gaps = 6/52 (11%)
Query: 1022 YLVDECHKAGLFGTPEQLKYLVDECHKAGLYVLLDVVHS---HASKNVLDGL 1070
Y + L +++ +++ GL V VH+ A LD
Sbjct: 314 YTDNPTTSGELVMNKDEIVEVIERAKPLGLDVA---VHAIGDKAVDVALDAF 362
>3be7_A Zn-dependent arginine carboxypeptidase; unknown source,
amidohydrolase, sargasso SEA, structural GEN protein
structure initiative, PSI; HET: ARG; 2.30A {Unidentified}
SCOP: b.92.1.9 c.1.9.18 PDB: 3dug_A*
Length = 408
Score = 30.8 bits (70), Expect = 3.0
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 3/30 (10%)
Query: 1035 TPEQLKYLVDECHKAGLYVLLDVVHSHASK 1064
T E++K +VDE H G+ V H+H
Sbjct: 204 TLEEMKAIVDEAHNHGMKV---AAHAHGLI 230
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate
dependent decarboxylase, acid stress stringent response;
HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Length = 715
Score = 30.8 bits (69), Expect = 3.5
Identities = 13/135 (9%), Positives = 32/135 (23%), Gaps = 20/135 (14%)
Query: 113 QSIQYILTGVFGTPEQLKYLVD-ECHKA---GLFGTPEQLKYLVDECHKAGLFG--TPEQ 166
+ + + L+D CHK+ + + Y + G+ G +
Sbjct: 222 TANKIVGMYSAPAGS--TILIDRNCHKSLTHLMMMSDVTPIYFRPTRNAYGILGGIPQSE 279
Query: 167 LKYLVDECHKAGLFGTPEQLKYLVDECHKAGLFGTPEQLKYLVDECHKAGLFGTPEQLKY 226
++ + TP + + G ++ +
Sbjct: 280 FQH---ATIAKRVKETPNATWPVHAVITNSTYDGLLYNTDFIKKTLDVKSI--------- 327
Query: 227 LVDECHKAGLFGTPE 241
D +P
Sbjct: 328 HFDSAWVPYTNFSPI 342
Score = 30.4 bits (68), Expect = 4.3
Identities = 13/118 (11%), Positives = 29/118 (24%), Gaps = 18/118 (15%)
Query: 149 KYLVD-ECHKA---GLFGTPEQLKYLVDECHKAGLFG--TPEQLKYLVDECHKAGLFGTP 202
L+D CHK+ + + Y + G+ G + ++ + TP
Sbjct: 237 TILIDRNCHKSLTHLMMMSDVTPIYFRPTRNAYGILGGIPQSEFQH---ATIAKRVKETP 293
Query: 203 EQLKYLVDECHKAGLFGTPEQLKYLVDECHKAGLFGTPEQLKYLVDECHKAGLFGTPE 260
+ + G ++ + D +P
Sbjct: 294 NATWPVHAVITNSTYDGLLYNTDFIKKTLDVKSI---------HFDSAWVPYTNFSPI 342
Score = 30.4 bits (68), Expect = 4.3
Identities = 13/118 (11%), Positives = 29/118 (24%), Gaps = 18/118 (15%)
Query: 168 KYLVD-ECHKA---GLFGTPEQLKYLVDECHKAGLFG--TPEQLKYLVDECHKAGLFGTP 221
L+D CHK+ + + Y + G+ G + ++ + TP
Sbjct: 237 TILIDRNCHKSLTHLMMMSDVTPIYFRPTRNAYGILGGIPQSEFQH---ATIAKRVKETP 293
Query: 222 EQLKYLVDECHKAGLFGTPEQLKYLVDECHKAGLFGTPEQLKYLVDECHKAGLFGTPE 279
+ + G ++ + D +P
Sbjct: 294 NATWPVHAVITNSTYDGLLYNTDFIKKTLDVKSI---------HFDSAWVPYTNFSPI 342
Score = 30.4 bits (68), Expect = 4.3
Identities = 13/118 (11%), Positives = 29/118 (24%), Gaps = 18/118 (15%)
Query: 187 KYLVD-ECHKA---GLFGTPEQLKYLVDECHKAGLFG--TPEQLKYLVDECHKAGLFGTP 240
L+D CHK+ + + Y + G+ G + ++ + TP
Sbjct: 237 TILIDRNCHKSLTHLMMMSDVTPIYFRPTRNAYGILGGIPQSEFQH---ATIAKRVKETP 293
Query: 241 EQLKYLVDECHKAGLFGTPEQLKYLVDECHKAGLFGTPEQLKYLVDECHKAGLFGTPE 298
+ + G ++ + D +P
Sbjct: 294 NATWPVHAVITNSTYDGLLYNTDFIKKTLDVKSI---------HFDSAWVPYTNFSPI 342
Score = 30.4 bits (68), Expect = 4.3
Identities = 13/118 (11%), Positives = 29/118 (24%), Gaps = 18/118 (15%)
Query: 206 KYLVD-ECHKA---GLFGTPEQLKYLVDECHKAGLFG--TPEQLKYLVDECHKAGLFGTP 259
L+D CHK+ + + Y + G+ G + ++ + TP
Sbjct: 237 TILIDRNCHKSLTHLMMMSDVTPIYFRPTRNAYGILGGIPQSEFQH---ATIAKRVKETP 293
Query: 260 EQLKYLVDECHKAGLFGTPEQLKYLVDECHKAGLFGTPEQLKYLVDECHKAGLFGTPE 317
+ + G ++ + D +P
Sbjct: 294 NATWPVHAVITNSTYDGLLYNTDFIKKTLDVKSI---------HFDSAWVPYTNFSPI 342
Score = 30.4 bits (68), Expect = 4.3
Identities = 13/118 (11%), Positives = 29/118 (24%), Gaps = 18/118 (15%)
Query: 225 KYLVD-ECHKA---GLFGTPEQLKYLVDECHKAGLFG--TPEQLKYLVDECHKAGLFGTP 278
L+D CHK+ + + Y + G+ G + ++ + TP
Sbjct: 237 TILIDRNCHKSLTHLMMMSDVTPIYFRPTRNAYGILGGIPQSEFQH---ATIAKRVKETP 293
Query: 279 EQLKYLVDECHKAGLFGTPEQLKYLVDECHKAGLFGTPEQLKYLVDECHKAGLFGTPE 336
+ + G ++ + D +P
Sbjct: 294 NATWPVHAVITNSTYDGLLYNTDFIKKTLDVKSI---------HFDSAWVPYTNFSPI 342
Score = 30.4 bits (68), Expect = 4.3
Identities = 13/118 (11%), Positives = 29/118 (24%), Gaps = 18/118 (15%)
Query: 244 KYLVD-ECHKA---GLFGTPEQLKYLVDECHKAGLFG--TPEQLKYLVDECHKAGLFGTP 297
L+D CHK+ + + Y + G+ G + ++ + TP
Sbjct: 237 TILIDRNCHKSLTHLMMMSDVTPIYFRPTRNAYGILGGIPQSEFQH---ATIAKRVKETP 293
Query: 298 EQLKYLVDECHKAGLFGTPEQLKYLVDECHKAGLFGTPEQLKYLVDECHKAGLFGTPE 355
+ + G ++ + D +P
Sbjct: 294 NATWPVHAVITNSTYDGLLYNTDFIKKTLDVKSI---------HFDSAWVPYTNFSPI 342
Score = 30.4 bits (68), Expect = 4.3
Identities = 13/118 (11%), Positives = 29/118 (24%), Gaps = 18/118 (15%)
Query: 263 KYLVD-ECHKA---GLFGTPEQLKYLVDECHKAGLFG--TPEQLKYLVDECHKAGLFGTP 316
L+D CHK+ + + Y + G+ G + ++ + TP
Sbjct: 237 TILIDRNCHKSLTHLMMMSDVTPIYFRPTRNAYGILGGIPQSEFQH---ATIAKRVKETP 293
Query: 317 EQLKYLVDECHKAGLFGTPEQLKYLVDECHKAGLFGTPEQLKYLVDECHKAGLFGTPE 374
+ + G ++ + D +P
Sbjct: 294 NATWPVHAVITNSTYDGLLYNTDFIKKTLDVKSI---------HFDSAWVPYTNFSPI 342
Score = 30.4 bits (68), Expect = 4.3
Identities = 13/118 (11%), Positives = 29/118 (24%), Gaps = 18/118 (15%)
Query: 282 KYLVD-ECHKA---GLFGTPEQLKYLVDECHKAGLFG--TPEQLKYLVDECHKAGLFGTP 335
L+D CHK+ + + Y + G+ G + ++ + TP
Sbjct: 237 TILIDRNCHKSLTHLMMMSDVTPIYFRPTRNAYGILGGIPQSEFQH---ATIAKRVKETP 293
Query: 336 EQLKYLVDECHKAGLFGTPEQLKYLVDECHKAGLFGTPEQLKYLVDECHKAGLFGTPE 393
+ + G ++ + D +P
Sbjct: 294 NATWPVHAVITNSTYDGLLYNTDFIKKTLDVKSI---------HFDSAWVPYTNFSPI 342
Score = 30.4 bits (68), Expect = 4.3
Identities = 13/118 (11%), Positives = 29/118 (24%), Gaps = 18/118 (15%)
Query: 301 KYLVD-ECHKA---GLFGTPEQLKYLVDECHKAGLFG--TPEQLKYLVDECHKAGLFGTP 354
L+D CHK+ + + Y + G+ G + ++ + TP
Sbjct: 237 TILIDRNCHKSLTHLMMMSDVTPIYFRPTRNAYGILGGIPQSEFQH---ATIAKRVKETP 293
Query: 355 EQLKYLVDECHKAGLFGTPEQLKYLVDECHKAGLFGTPEQLKYLVDECHKAGLFGTPE 412
+ + G ++ + D +P
Sbjct: 294 NATWPVHAVITNSTYDGLLYNTDFIKKTLDVKSI---------HFDSAWVPYTNFSPI 342
Score = 30.4 bits (68), Expect = 4.3
Identities = 13/118 (11%), Positives = 29/118 (24%), Gaps = 18/118 (15%)
Query: 320 KYLVD-ECHKA---GLFGTPEQLKYLVDECHKAGLFG--TPEQLKYLVDECHKAGLFGTP 373
L+D CHK+ + + Y + G+ G + ++ + TP
Sbjct: 237 TILIDRNCHKSLTHLMMMSDVTPIYFRPTRNAYGILGGIPQSEFQH---ATIAKRVKETP 293
Query: 374 EQLKYLVDECHKAGLFGTPEQLKYLVDECHKAGLFGTPEQLKYLVDECHKAGLFGTPE 431
+ + G ++ + D +P
Sbjct: 294 NATWPVHAVITNSTYDGLLYNTDFIKKTLDVKSI---------HFDSAWVPYTNFSPI 342
Score = 30.4 bits (68), Expect = 4.3
Identities = 13/118 (11%), Positives = 29/118 (24%), Gaps = 18/118 (15%)
Query: 339 KYLVD-ECHKA---GLFGTPEQLKYLVDECHKAGLFG--TPEQLKYLVDECHKAGLFGTP 392
L+D CHK+ + + Y + G+ G + ++ + TP
Sbjct: 237 TILIDRNCHKSLTHLMMMSDVTPIYFRPTRNAYGILGGIPQSEFQH---ATIAKRVKETP 293
Query: 393 EQLKYLVDECHKAGLFGTPEQLKYLVDECHKAGLFGTPEQLKYLVDECHKAGLFGTPE 450
+ + G ++ + D +P
Sbjct: 294 NATWPVHAVITNSTYDGLLYNTDFIKKTLDVKSI---------HFDSAWVPYTNFSPI 342
Score = 30.4 bits (68), Expect = 4.3
Identities = 13/118 (11%), Positives = 29/118 (24%), Gaps = 18/118 (15%)
Query: 358 KYLVD-ECHKA---GLFGTPEQLKYLVDECHKAGLFG--TPEQLKYLVDECHKAGLFGTP 411
L+D CHK+ + + Y + G+ G + ++ + TP
Sbjct: 237 TILIDRNCHKSLTHLMMMSDVTPIYFRPTRNAYGILGGIPQSEFQH---ATIAKRVKETP 293
Query: 412 EQLKYLVDECHKAGLFGTPEQLKYLVDECHKAGLFGTPEQLKYLVDECHKAGLFGTPE 469
+ + G ++ + D +P
Sbjct: 294 NATWPVHAVITNSTYDGLLYNTDFIKKTLDVKSI---------HFDSAWVPYTNFSPI 342
Score = 30.4 bits (68), Expect = 4.3
Identities = 13/118 (11%), Positives = 29/118 (24%), Gaps = 18/118 (15%)
Query: 377 KYLVD-ECHKA---GLFGTPEQLKYLVDECHKAGLFG--TPEQLKYLVDECHKAGLFGTP 430
L+D CHK+ + + Y + G+ G + ++ + TP
Sbjct: 237 TILIDRNCHKSLTHLMMMSDVTPIYFRPTRNAYGILGGIPQSEFQH---ATIAKRVKETP 293
Query: 431 EQLKYLVDECHKAGLFGTPEQLKYLVDECHKAGLFGTPEQLKYLVDECHKAGLFGTPE 488
+ + G ++ + D +P
Sbjct: 294 NATWPVHAVITNSTYDGLLYNTDFIKKTLDVKSI---------HFDSAWVPYTNFSPI 342
Score = 30.4 bits (68), Expect = 4.3
Identities = 13/118 (11%), Positives = 29/118 (24%), Gaps = 18/118 (15%)
Query: 396 KYLVD-ECHKA---GLFGTPEQLKYLVDECHKAGLFG--TPEQLKYLVDECHKAGLFGTP 449
L+D CHK+ + + Y + G+ G + ++ + TP
Sbjct: 237 TILIDRNCHKSLTHLMMMSDVTPIYFRPTRNAYGILGGIPQSEFQH---ATIAKRVKETP 293
Query: 450 EQLKYLVDECHKAGLFGTPEQLKYLVDECHKAGLFGTPEQLKYLVDECHKAGLFGTPE 507
+ + G ++ + D +P
Sbjct: 294 NATWPVHAVITNSTYDGLLYNTDFIKKTLDVKSI---------HFDSAWVPYTNFSPI 342
Score = 30.4 bits (68), Expect = 4.3
Identities = 13/118 (11%), Positives = 29/118 (24%), Gaps = 18/118 (15%)
Query: 415 KYLVD-ECHKA---GLFGTPEQLKYLVDECHKAGLFG--TPEQLKYLVDECHKAGLFGTP 468
L+D CHK+ + + Y + G+ G + ++ + TP
Sbjct: 237 TILIDRNCHKSLTHLMMMSDVTPIYFRPTRNAYGILGGIPQSEFQH---ATIAKRVKETP 293
Query: 469 EQLKYLVDECHKAGLFGTPEQLKYLVDECHKAGLFGTPEQLKYLVDECHKAGLFGTPE 526
+ + G ++ + D +P
Sbjct: 294 NATWPVHAVITNSTYDGLLYNTDFIKKTLDVKSI---------HFDSAWVPYTNFSPI 342
Score = 30.4 bits (68), Expect = 4.3
Identities = 13/118 (11%), Positives = 29/118 (24%), Gaps = 18/118 (15%)
Query: 434 KYLVD-ECHKA---GLFGTPEQLKYLVDECHKAGLFG--TPEQLKYLVDECHKAGLFGTP 487
L+D CHK+ + + Y + G+ G + ++ + TP
Sbjct: 237 TILIDRNCHKSLTHLMMMSDVTPIYFRPTRNAYGILGGIPQSEFQH---ATIAKRVKETP 293
Query: 488 EQLKYLVDECHKAGLFGTPEQLKYLVDECHKAGLFGTPEQLKYLVDECHKAGLFGTPE 545
+ + G ++ + D +P
Sbjct: 294 NATWPVHAVITNSTYDGLLYNTDFIKKTLDVKSI---------HFDSAWVPYTNFSPI 342
Score = 30.4 bits (68), Expect = 4.3
Identities = 13/118 (11%), Positives = 29/118 (24%), Gaps = 18/118 (15%)
Query: 453 KYLVD-ECHKA---GLFGTPEQLKYLVDECHKAGLFG--TPEQLKYLVDECHKAGLFGTP 506
L+D CHK+ + + Y + G+ G + ++ + TP
Sbjct: 237 TILIDRNCHKSLTHLMMMSDVTPIYFRPTRNAYGILGGIPQSEFQH---ATIAKRVKETP 293
Query: 507 EQLKYLVDECHKAGLFGTPEQLKYLVDECHKAGLFGTPEQLKYLVDECHKAGLFGTPE 564
+ + G ++ + D +P
Sbjct: 294 NATWPVHAVITNSTYDGLLYNTDFIKKTLDVKSI---------HFDSAWVPYTNFSPI 342
Score = 30.4 bits (68), Expect = 4.3
Identities = 13/118 (11%), Positives = 29/118 (24%), Gaps = 18/118 (15%)
Query: 472 KYLVD-ECHKA---GLFGTPEQLKYLVDECHKAGLFG--TPEQLKYLVDECHKAGLFGTP 525
L+D CHK+ + + Y + G+ G + ++ + TP
Sbjct: 237 TILIDRNCHKSLTHLMMMSDVTPIYFRPTRNAYGILGGIPQSEFQH---ATIAKRVKETP 293
Query: 526 EQLKYLVDECHKAGLFGTPEQLKYLVDECHKAGLFGTPEQLKYLVDECHKAGLFGTPE 583
+ + G ++ + D +P
Sbjct: 294 NATWPVHAVITNSTYDGLLYNTDFIKKTLDVKSI---------HFDSAWVPYTNFSPI 342
Score = 30.4 bits (68), Expect = 4.3
Identities = 13/118 (11%), Positives = 29/118 (24%), Gaps = 18/118 (15%)
Query: 491 KYLVD-ECHKA---GLFGTPEQLKYLVDECHKAGLFG--TPEQLKYLVDECHKAGLFGTP 544
L+D CHK+ + + Y + G+ G + ++ + TP
Sbjct: 237 TILIDRNCHKSLTHLMMMSDVTPIYFRPTRNAYGILGGIPQSEFQH---ATIAKRVKETP 293
Query: 545 EQLKYLVDECHKAGLFGTPEQLKYLVDECHKAGLFGTPEQLKYLVDECHKAGLFGTPE 602
+ + G ++ + D +P
Sbjct: 294 NATWPVHAVITNSTYDGLLYNTDFIKKTLDVKSI---------HFDSAWVPYTNFSPI 342
Score = 30.4 bits (68), Expect = 4.3
Identities = 13/118 (11%), Positives = 29/118 (24%), Gaps = 18/118 (15%)
Query: 510 KYLVD-ECHKA---GLFGTPEQLKYLVDECHKAGLFG--TPEQLKYLVDECHKAGLFGTP 563
L+D CHK+ + + Y + G+ G + ++ + TP
Sbjct: 237 TILIDRNCHKSLTHLMMMSDVTPIYFRPTRNAYGILGGIPQSEFQH---ATIAKRVKETP 293
Query: 564 EQLKYLVDECHKAGLFGTPEQLKYLVDECHKAGLFGTPEQLKYLVDECHKAGLFGTPE 621
+ + G ++ + D +P
Sbjct: 294 NATWPVHAVITNSTYDGLLYNTDFIKKTLDVKSI---------HFDSAWVPYTNFSPI 342
Score = 30.4 bits (68), Expect = 4.3
Identities = 13/118 (11%), Positives = 29/118 (24%), Gaps = 18/118 (15%)
Query: 529 KYLVD-ECHKA---GLFGTPEQLKYLVDECHKAGLFG--TPEQLKYLVDECHKAGLFGTP 582
L+D CHK+ + + Y + G+ G + ++ + TP
Sbjct: 237 TILIDRNCHKSLTHLMMMSDVTPIYFRPTRNAYGILGGIPQSEFQH---ATIAKRVKETP 293
Query: 583 EQLKYLVDECHKAGLFGTPEQLKYLVDECHKAGLFGTPEQLKYLVDECHKAGLFGTPE 640
+ + G ++ + D +P
Sbjct: 294 NATWPVHAVITNSTYDGLLYNTDFIKKTLDVKSI---------HFDSAWVPYTNFSPI 342
Score = 30.4 bits (68), Expect = 4.3
Identities = 13/118 (11%), Positives = 29/118 (24%), Gaps = 18/118 (15%)
Query: 548 KYLVD-ECHKA---GLFGTPEQLKYLVDECHKAGLFG--TPEQLKYLVDECHKAGLFGTP 601
L+D CHK+ + + Y + G+ G + ++ + TP
Sbjct: 237 TILIDRNCHKSLTHLMMMSDVTPIYFRPTRNAYGILGGIPQSEFQH---ATIAKRVKETP 293
Query: 602 EQLKYLVDECHKAGLFGTPEQLKYLVDECHKAGLFGTPEQLKYLVDECHKAGLFGTPE 659
+ + G ++ + D +P
Sbjct: 294 NATWPVHAVITNSTYDGLLYNTDFIKKTLDVKSI---------HFDSAWVPYTNFSPI 342
Score = 30.4 bits (68), Expect = 4.3
Identities = 13/118 (11%), Positives = 29/118 (24%), Gaps = 18/118 (15%)
Query: 567 KYLVD-ECHKA---GLFGTPEQLKYLVDECHKAGLFG--TPEQLKYLVDECHKAGLFGTP 620
L+D CHK+ + + Y + G+ G + ++ + TP
Sbjct: 237 TILIDRNCHKSLTHLMMMSDVTPIYFRPTRNAYGILGGIPQSEFQH---ATIAKRVKETP 293
Query: 621 EQLKYLVDECHKAGLFGTPEQLKYLVDECHKAGLFGTPEQLKYLVDECHKAGLFGTPE 678
+ + G ++ + D +P
Sbjct: 294 NATWPVHAVITNSTYDGLLYNTDFIKKTLDVKSI---------HFDSAWVPYTNFSPI 342
Score = 30.4 bits (68), Expect = 4.3
Identities = 13/118 (11%), Positives = 29/118 (24%), Gaps = 18/118 (15%)
Query: 586 KYLVD-ECHKA---GLFGTPEQLKYLVDECHKAGLFG--TPEQLKYLVDECHKAGLFGTP 639
L+D CHK+ + + Y + G+ G + ++ + TP
Sbjct: 237 TILIDRNCHKSLTHLMMMSDVTPIYFRPTRNAYGILGGIPQSEFQH---ATIAKRVKETP 293
Query: 640 EQLKYLVDECHKAGLFGTPEQLKYLVDECHKAGLFGTPEQLKYLVDECHKAGLFGTPE 697
+ + G ++ + D +P
Sbjct: 294 NATWPVHAVITNSTYDGLLYNTDFIKKTLDVKSI---------HFDSAWVPYTNFSPI 342
Score = 30.4 bits (68), Expect = 4.3
Identities = 13/118 (11%), Positives = 29/118 (24%), Gaps = 18/118 (15%)
Query: 605 KYLVD-ECHKA---GLFGTPEQLKYLVDECHKAGLFG--TPEQLKYLVDECHKAGLFGTP 658
L+D CHK+ + + Y + G+ G + ++ + TP
Sbjct: 237 TILIDRNCHKSLTHLMMMSDVTPIYFRPTRNAYGILGGIPQSEFQH---ATIAKRVKETP 293
Query: 659 EQLKYLVDECHKAGLFGTPEQLKYLVDECHKAGLFGTPEQLKYLVDECHKAGLFGTPE 716
+ + G ++ + D +P
Sbjct: 294 NATWPVHAVITNSTYDGLLYNTDFIKKTLDVKSI---------HFDSAWVPYTNFSPI 342
Score = 30.4 bits (68), Expect = 4.3
Identities = 13/118 (11%), Positives = 29/118 (24%), Gaps = 18/118 (15%)
Query: 624 KYLVD-ECHKA---GLFGTPEQLKYLVDECHKAGLFG--TPEQLKYLVDECHKAGLFGTP 677
L+D CHK+ + + Y + G+ G + ++ + TP
Sbjct: 237 TILIDRNCHKSLTHLMMMSDVTPIYFRPTRNAYGILGGIPQSEFQH---ATIAKRVKETP 293
Query: 678 EQLKYLVDECHKAGLFGTPEQLKYLVDECHKAGLFGTPEQLKYLVDECHKAGLFGTPE 735
+ + G ++ + D +P
Sbjct: 294 NATWPVHAVITNSTYDGLLYNTDFIKKTLDVKSI---------HFDSAWVPYTNFSPI 342
Score = 30.4 bits (68), Expect = 4.3
Identities = 13/118 (11%), Positives = 29/118 (24%), Gaps = 18/118 (15%)
Query: 643 KYLVD-ECHKA---GLFGTPEQLKYLVDECHKAGLFG--TPEQLKYLVDECHKAGLFGTP 696
L+D CHK+ + + Y + G+ G + ++ + TP
Sbjct: 237 TILIDRNCHKSLTHLMMMSDVTPIYFRPTRNAYGILGGIPQSEFQH---ATIAKRVKETP 293
Query: 697 EQLKYLVDECHKAGLFGTPEQLKYLVDECHKAGLFGTPEQLKYLVDECHKAGLFGTPE 754
+ + G ++ + D +P
Sbjct: 294 NATWPVHAVITNSTYDGLLYNTDFIKKTLDVKSI---------HFDSAWVPYTNFSPI 342
Score = 30.4 bits (68), Expect = 4.3
Identities = 13/118 (11%), Positives = 29/118 (24%), Gaps = 18/118 (15%)
Query: 662 KYLVD-ECHKA---GLFGTPEQLKYLVDECHKAGLFG--TPEQLKYLVDECHKAGLFGTP 715
L+D CHK+ + + Y + G+ G + ++ + TP
Sbjct: 237 TILIDRNCHKSLTHLMMMSDVTPIYFRPTRNAYGILGGIPQSEFQH---ATIAKRVKETP 293
Query: 716 EQLKYLVDECHKAGLFGTPEQLKYLVDECHKAGLFGTPEQLKYLVDECHKAGLFGTPE 773
+ + G ++ + D +P
Sbjct: 294 NATWPVHAVITNSTYDGLLYNTDFIKKTLDVKSI---------HFDSAWVPYTNFSPI 342
>2qs8_A XAA-Pro dipeptidase; amidohydrolase, TIM barrel, protein structure
initiative, PSI-2, NYSGXRC, structural genomics; 2.33A
{Alteromonas macleodii} SCOP: b.92.1.9 c.1.9.18
Length = 418
Score = 30.4 bits (69), Expect = 3.6
Identities = 21/152 (13%), Positives = 49/152 (32%), Gaps = 46/152 (30%)
Query: 125 TPEQLKYLVDECHKAGLF-----GTPEQLKYLVDECHKAGL-------FGTPEQLKYLVD 172
T E++ +V G++ E +K + KAG+ F E + +++
Sbjct: 214 TQEEVDAVVSAAKDYGMWVAVHAHGAEGMKRAI----KAGVDSIEHGTFMDLEAMDLMIE 269
Query: 173 ECHKAGLFGTPEQLKYLVDECHKAGLFGTPEQLKYL---------VDECHKAG---LFGT 220
+ T +++ ++ F + K + ++ G FGT
Sbjct: 270 --NGTYYVPTISAGEFVAEKSKIDNFFPEIVRPKAASVGPQISDTFRKAYEKGVKIAFGT 327
Query: 221 ----------PEQLKYLVDECHKAGLFGTPEQ 242
++ Y+V + G+ +
Sbjct: 328 DAGVQKHGTNWKEFVYMV----ENGM--PAMK 353
Score = 30.4 bits (69), Expect = 3.6
Identities = 21/152 (13%), Positives = 49/152 (32%), Gaps = 46/152 (30%)
Query: 239 TPEQLKYLVDECHKAGLF-----GTPEQLKYLVDECHKAGL-------FGTPEQLKYLVD 286
T E++ +V G++ E +K + KAG+ F E + +++
Sbjct: 214 TQEEVDAVVSAAKDYGMWVAVHAHGAEGMKRAI----KAGVDSIEHGTFMDLEAMDLMIE 269
Query: 287 ECHKAGLFGTPEQLKYLVDECHKAGLFGTPEQLKYL---------VDECHKAG---LFGT 334
+ T +++ ++ F + K + ++ G FGT
Sbjct: 270 --NGTYYVPTISAGEFVAEKSKIDNFFPEIVRPKAASVGPQISDTFRKAYEKGVKIAFGT 327
Query: 335 ----------PEQLKYLVDECHKAGLFGTPEQ 356
++ Y+V + G+ +
Sbjct: 328 DAGVQKHGTNWKEFVYMV----ENGM--PAMK 353
Score = 30.4 bits (69), Expect = 3.6
Identities = 21/152 (13%), Positives = 49/152 (32%), Gaps = 46/152 (30%)
Query: 353 TPEQLKYLVDECHKAGLF-----GTPEQLKYLVDECHKAGL-------FGTPEQLKYLVD 400
T E++ +V G++ E +K + KAG+ F E + +++
Sbjct: 214 TQEEVDAVVSAAKDYGMWVAVHAHGAEGMKRAI----KAGVDSIEHGTFMDLEAMDLMIE 269
Query: 401 ECHKAGLFGTPEQLKYLVDECHKAGLFGTPEQLKYL---------VDECHKAG---LFGT 448
+ T +++ ++ F + K + ++ G FGT
Sbjct: 270 --NGTYYVPTISAGEFVAEKSKIDNFFPEIVRPKAASVGPQISDTFRKAYEKGVKIAFGT 327
Query: 449 ----------PEQLKYLVDECHKAGLFGTPEQ 470
++ Y+V + G+ +
Sbjct: 328 DAGVQKHGTNWKEFVYMV----ENGM--PAMK 353
Score = 30.4 bits (69), Expect = 3.6
Identities = 21/152 (13%), Positives = 49/152 (32%), Gaps = 46/152 (30%)
Query: 467 TPEQLKYLVDECHKAGLF-----GTPEQLKYLVDECHKAGL-------FGTPEQLKYLVD 514
T E++ +V G++ E +K + KAG+ F E + +++
Sbjct: 214 TQEEVDAVVSAAKDYGMWVAVHAHGAEGMKRAI----KAGVDSIEHGTFMDLEAMDLMIE 269
Query: 515 ECHKAGLFGTPEQLKYLVDECHKAGLFGTPEQLKYL---------VDECHKAG---LFGT 562
+ T +++ ++ F + K + ++ G FGT
Sbjct: 270 --NGTYYVPTISAGEFVAEKSKIDNFFPEIVRPKAASVGPQISDTFRKAYEKGVKIAFGT 327
Query: 563 ----------PEQLKYLVDECHKAGLFGTPEQ 584
++ Y+V + G+ +
Sbjct: 328 DAGVQKHGTNWKEFVYMV----ENGM--PAMK 353
Score = 30.4 bits (69), Expect = 3.6
Identities = 21/152 (13%), Positives = 49/152 (32%), Gaps = 46/152 (30%)
Query: 581 TPEQLKYLVDECHKAGLF-----GTPEQLKYLVDECHKAGL-------FGTPEQLKYLVD 628
T E++ +V G++ E +K + KAG+ F E + +++
Sbjct: 214 TQEEVDAVVSAAKDYGMWVAVHAHGAEGMKRAI----KAGVDSIEHGTFMDLEAMDLMIE 269
Query: 629 ECHKAGLFGTPEQLKYLVDECHKAGLFGTPEQLKYL---------VDECHKAG---LFGT 676
+ T +++ ++ F + K + ++ G FGT
Sbjct: 270 --NGTYYVPTISAGEFVAEKSKIDNFFPEIVRPKAASVGPQISDTFRKAYEKGVKIAFGT 327
Query: 677 ----------PEQLKYLVDECHKAGLFGTPEQ 698
++ Y+V + G+ +
Sbjct: 328 DAGVQKHGTNWKEFVYMV----ENGM--PAMK 353
Score = 30.4 bits (69), Expect = 3.6
Identities = 8/30 (26%), Positives = 16/30 (53%), Gaps = 3/30 (10%)
Query: 1035 TPEQLKYLVDECHKAGLYVLLDVVHSHASK 1064
T E++ +V G++V VH+H ++
Sbjct: 214 TQEEVDAVVSAAKDYGMWV---AVHAHGAE 240
>3zs7_A Pyridoxal kinase; transferase, sleeping sickness; HET: ATP; 2.00A
{Trypanosoma brucei}
Length = 300
Score = 30.2 bits (68), Expect = 3.9
Identities = 8/50 (16%), Positives = 21/50 (42%), Gaps = 2/50 (4%)
Query: 106 LSSIKLIQSIQYILTGVFGTPEQLKYLVDECH--KAGLFGTPEQLKYLVD 153
+ + + + +YILTG + + + D + ++L ++ D
Sbjct: 68 VRANNFLSNYRYILTGYINNVDIIGRIRDTLKEVRELREKEDKKLTFICD 117
>3ndz_A Endoglucanase D; cellotriose, xylanase, carbohydrate binding D
glucanase, hydrolase; HET: CT3; 2.08A {Clostridium
cellulovorans} PDB: 3ndy_A*
Length = 345
Score = 30.0 bits (67), Expect = 4.8
Identities = 3/23 (13%), Positives = 14/23 (60%)
Query: 1037 EQLKYLVDECHKAGLYVLLDVVH 1059
++++ + + +YV++++ H
Sbjct: 83 KRVEEIANYAFDNDMYVIINLHH 105
>3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A
{Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A*
Length = 320
Score = 29.9 bits (67), Expect = 5.1
Identities = 7/23 (30%), Positives = 15/23 (65%)
Query: 1037 EQLKYLVDECHKAGLYVLLDVVH 1059
+++K++VD K L V+++ H
Sbjct: 82 DRVKHVVDVALKNDLVVIINCHH 104
>2ddm_A Pyridoxine kinase; pyridoxal kinase, ribokinase, pyridoxal
5'-phosphate, vitamin B6, phosphorylation, transferase;
2.10A {Escherichia coli} PDB: 2ddo_A* 2ddw_A*
Length = 283
Score = 29.9 bits (68), Expect = 5.1
Identities = 21/98 (21%), Positives = 33/98 (33%), Gaps = 11/98 (11%)
Query: 58 FTTSYNKYGIHVQADNSVRCFEWAPSAQQLYLTGNVSLTPWSIMEE--ASLSSIKLIQSI 115
N G++V A +V S Y T P +L ++ +
Sbjct: 37 PAIKQN--GLNVFAVPTVLL-----SNTPHYDTFYGGAIPDEWFSGYLRALQERDALRQL 89
Query: 116 QYILTGVFGTPEQLKYLVDECHKAGLFGTPEQLKYLVD 153
+ + TG GT Q+K L + L L +VD
Sbjct: 90 RAVTTGYMGTASQIKILAEWLTA--LRKDHPDLLIMVD 125
>3tev_A Glycosyl hyrolase, family 3; PSI-biology, midwest center for
structural genomics, structu genomic, MCSG, hydrolase;
2.30A {Deinococcus radiodurans}
Length = 351
Score = 29.6 bits (67), Expect = 7.0
Identities = 13/67 (19%), Positives = 22/67 (32%), Gaps = 9/67 (13%)
Query: 101 MEEASLSSIKLIQSI-QYILTGVFGT--PEQLKYLVDECHKAG--LFG----TPEQLKYL 151
M S S Q ++ + G + + E LFG + EQL+ L
Sbjct: 4 MSPISEPSRLDPVRPGQLLMIDLPGPELDKDTAAYLREHGIGAVCLFGKNVESAEQLRRL 63
Query: 152 VDECHKA 158
+ +
Sbjct: 64 CADLREV 70
>4a2q_A RIG-I, retinoic acid inducible protein I; hydrolase, superfamily 2
RNA helicase, ATP and dsRNA binding antiviral signalling
pathway; 3.40A {Anas platyrhynchos}
Length = 797
Score = 29.9 bits (66), Expect = 7.3
Identities = 9/43 (20%), Positives = 19/43 (44%)
Query: 45 LEQFEKHEGGIEKFTTSYNKYGIHVQADNSVRCFEWAPSAQQL 87
L+ F+ + TS GI + N V +E++ + ++
Sbjct: 686 LDAFKTSKDNRLLIATSVADEGIDIVQCNLVVLYEYSGNVTKM 728
>1qtw_A Endonuclease IV; DNA repair enzyme, TIM barrel, trinuclear Zn
cluster, hydrolase; 1.02A {Escherichia coli} SCOP:
c.1.15.1 PDB: 1qum_A* 2nqh_A 2nqj_A* 2nq9_A*
Length = 285
Score = 29.4 bits (66), Expect = 7.6
Identities = 20/105 (19%), Positives = 39/105 (37%), Gaps = 15/105 (14%)
Query: 971 AESHDQALVGDKTIAFWL-----MDKEMYTHMSTLSDPSLIIDRACEKFGTPEQLKYLVD 1025
AES + AL + + + + L+ IID +K ++ +D
Sbjct: 127 AESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAA---IIDGVEDK----SRVGVCID 179
Query: 1026 ECH--KAGLFG-TPEQLKYLVDECHKAGLYVLLDVVHSHASKNVL 1067
CH AG TP + + + + + L +H + +K+
Sbjct: 180 TCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTF 224
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase,
phosphate-binding motif; 2.04A {Escherichia coli} PDB:
3cqi_A 3cqh_A 3cqk_A
Length = 295
Score = 29.3 bits (66), Expect = 8.2
Identities = 12/86 (13%), Positives = 22/86 (25%), Gaps = 15/86 (17%)
Query: 1018 EQLKYLVDECHKAG-----------LFGTPEQLKYLVDECHKAGLYVLLDVVHSHA-SKN 1065
+ LK V+ +A L + + + + D+ + A +
Sbjct: 147 DGLKESVEMASRAQVTLAMEIMDYPLMNSISKALGYAHYLNNPWFQLYPDIGNLSAWDND 206
Query: 1066 VLDGLNEFDGTQACFFH--DGPRGTH 1089
V L H D G
Sbjct: 207 VQMELQAG-IGHIVAVHVKDTKPGVF 231
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.320 0.140 0.443
Gapped
Lambda K H
0.267 0.0625 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 21,539,601
Number of extensions: 1437645
Number of successful extensions: 7614
Number of sequences better than 10.0: 1
Number of HSP's gapped: 7456
Number of HSP's successfully gapped: 1353
Length of query: 1276
Length of database: 6,701,793
Length adjustment: 105
Effective length of query: 1171
Effective length of database: 3,770,088
Effective search space: 4414773048
Effective search space used: 4414773048
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.3 bits)