Your job contains 1 sequence.
>psy9004
MRTNGFGTPEQLKYLVDECHKAGLFGTPEQLKYLVDECHKAGLFGTPEQLKYLVDECHKA
GLYVLLDVVHSHASKNVLDGLNEFDGTQACFFHDGPRGTHPLWDSRLFNYSEIEVLRFLL
SNLRWYLEEYQFDGFRFDGVTSMLYHNHGCGEGFSGHYDEYFGLNVDTDALIYLMVANKF
LHDKYPEIITIAEDVSGMPASCRPVTEGGTGFDYRLGRPGLDKSFYGNASLGLEIRY
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy9004
(237 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0053138 - symbol:AGBE "1,4-Alpha-Glucan Branching ... 712 2.6e-70 1
UNIPROTKB|F1PX32 - symbol:GBE1 "Uncharacterized protein" ... 709 5.5e-70 1
MGI|MGI:1921435 - symbol:Gbe1 "glucan (1,4-alpha-), branc... 707 8.9e-70 1
RGD|1309968 - symbol:Gbe1 "glucan (1,4-alpha-), branching... 704 1.8e-69 1
ZFIN|ZDB-GENE-110914-16 - symbol:si:ch211-247m23.1 "si:ch... 701 3.8e-69 1
UNIPROTKB|E9PGM4 - symbol:GBE1 "1,4-alpha-glucan-branchin... 699 6.3e-69 1
UNIPROTKB|Q04446 - symbol:GBE1 "1,4-alpha-glucan-branchin... 699 6.3e-69 1
UNIPROTKB|F1MZP0 - symbol:GBE1 "Uncharacterized protein" ... 695 1.7e-68 1
ZFIN|ZDB-GENE-110411-171 - symbol:si:ch211-213e17.1 "si:c... 686 1.5e-67 1
UNIPROTKB|E1C303 - symbol:GBE1 "Uncharacterized protein" ... 678 1.1e-66 1
WB|WBGene00011409 - symbol:T04A8.7 species:6239 "Caenorha... 672 4.5e-66 1
UNIPROTKB|G4NAD9 - symbol:MGG_03186 "1,4-alpha-glucan-bra... 658 1.4e-64 1
TAIR|locus:2144608 - symbol:SBE2.2 "starch branching enzy... 653 4.7e-64 1
TAIR|locus:2044903 - symbol:SBE2.1 "starch branching enzy... 632 7.9e-62 1
UNIPROTKB|Q01401 - symbol:SBE1 "1,4-alpha-glucan-branchin... 625 4.3e-61 1
ASPGD|ASPL0000046871 - symbol:AN2314 species:162425 "Emer... 621 1.2e-60 1
DICTYBASE|DDB_G0274105 - symbol:glgB "branching enzyme" s... 591 1.7e-57 1
CGD|CAL0000583 - symbol:GLC3 species:5476 "Candida albica... 578 4.2e-56 1
SGD|S000000737 - symbol:GLC3 "Glycogen branching enzyme, ... 568 4.8e-55 1
UNIPROTKB|F1SK65 - symbol:F1SK65 "Uncharacterized protein... 492 5.4e-47 1
TAIR|locus:2092349 - symbol:EMB2729 "EMBRYO DEFECTIVE 272... 473 4.3e-44 1
UNIPROTKB|F1LYQ5 - symbol:F1LYQ5 "Uncharacterized protein... 360 7.7e-33 1
TIGR_CMR|SO_1494 - symbol:SO_1494 "1,4-alpha-glucan branc... 281 2.0e-25 2
UNIPROTKB|P07762 - symbol:glgB species:83333 "Escherichia... 264 8.7e-22 1
UNIPROTKB|Q10625 - symbol:glgB "1,4-alpha-glucan branchin... 260 2.3e-21 1
UNIPROTKB|Q9KNE8 - symbol:glgB "1,4-alpha-glucan branchin... 259 2.5e-21 1
TIGR_CMR|VC_A0016 - symbol:VC_A0016 "1,4-alpha-glucan bra... 259 2.5e-21 1
TIGR_CMR|BA_5123 - symbol:BA_5123 "1,4-alpha-glucan branc... 244 9.7e-20 1
UNIPROTKB|Q9KKS1 - symbol:VC_A1029 "Glycogen operon prote... 118 8.2e-06 2
TIGR_CMR|VC_A1029 - symbol:VC_A1029 "glycogen operon prot... 118 8.2e-06 2
TIGR_CMR|BA_4230 - symbol:BA_4230 "alpha-amylase" species... 130 9.1e-06 1
TIGR_CMR|GSU_2358 - symbol:GSU_2358 "isoamylase family pr... 125 3.9e-05 1
UNIPROTKB|Q81KP1 - symbol:BAS4597 "Putative pullulanase" ... 113 3.9e-05 2
TIGR_CMR|BA_4953 - symbol:BA_4953 "pullulanase, putative"... 113 3.9e-05 2
TAIR|locus:2061216 - symbol:ISA1 "isoamylase 1" species:3... 122 0.00011 1
ASPGD|ASPL0000038434 - symbol:amyF species:162425 "Emeric... 113 0.00060 1
>FB|FBgn0053138 [details] [associations]
symbol:AGBE "1,4-Alpha-Glucan Branching Enzyme" species:7227
"Drosophila melanogaster" [GO:0003844 "1,4-alpha-glucan branching
enzyme activity" evidence=ISS] [GO:0005978 "glycogen biosynthetic
process" evidence=IEA] [GO:0004553 "hydrolase activity, hydrolyzing
O-glycosyl compounds" evidence=IEA] [GO:0043169 "cation binding"
evidence=IEA] [GO:0008340 "determination of adult lifespan"
evidence=IMP] InterPro:IPR004193 InterPro:IPR006047
InterPro:IPR006048 InterPro:IPR006407 InterPro:IPR013781
InterPro:IPR015902 Pfam:PF00128 Pfam:PF02806 Pfam:PF02922
PIRSF:PIRSF000463 InterPro:IPR013780 EMBL:AE013599
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0043169
Gene3D:3.20.20.80 InterPro:IPR017853 SUPFAM:SSF51445 CAZy:GH13
Gene3D:2.60.40.1180 PANTHER:PTHR10357 GO:GO:0004553 CAZy:CBM48
GO:GO:0005978 InterPro:IPR014756 SUPFAM:SSF81296 GO:GO:0003844
eggNOG:COG0296 KO:K00700 OMA:EIDPYLK GeneTree:ENSGT00390000017040
RefSeq:NP_788342.1 UniGene:Dm.593 ProteinModelPortal:A1Z992
SMR:A1Z992 IntAct:A1Z992 STRING:A1Z992 PaxDb:A1Z992 PRIDE:A1Z992
EnsemblMetazoa:FBtr0087732 EnsemblMetazoa:FBtr0310496 GeneID:326264
KEGG:dme:Dmel_CG33138 UCSC:CG33138-RA FlyBase:FBgn0053138
InParanoid:A1Z992 OrthoDB:EOG4CNP63 PhylomeDB:A1Z992
GenomeRNAi:326264 NextBio:847913 Bgee:A1Z992 Uniprot:A1Z992
Length = 685
Score = 712 (255.7 bits), Expect = 2.6e-70, P = 2.6e-70
Identities = 133/180 (73%), Positives = 146/180 (81%)
Query: 44 FGTPEQLKYLVDECHKAGLYVLLDVVHSHASKNVLDGLNEFDGTQACFFHDGPRGTHPLW 103
+G PEQLK ++D H GL+VLLDVVHSHASKNV DGLN+FDGT +CFFHDG RG H LW
Sbjct: 248 YGNPEQLKRMIDVAHSHGLFVLLDVVHSHASKNVQDGLNQFDGTNSCFFHDGARGEHSLW 307
Query: 104 DSRLFNYSEIEVLRFLLSNLRWYLEEYQFDGFRFDGVTSMLYHNHGCGEGFSGHYDEYFG 163
DSRLFNY E EVLRFLLSNLRW+ +EY FDG+RFDGVTSMLYH+ G GEGFSG Y+EYFG
Sbjct: 308 DSRLFNYVEYEVLRFLLSNLRWWHDEYNFDGYRFDGVTSMLYHSRGIGEGFSGDYNEYFG 367
Query: 164 LNVDTDALIYLMVANKFLHDKYPEIITIAEDVSGMPASCRPVTEGGTGFDYRLGRPGLDK 223
LNVDTDAL YL +AN LH IITIAEDVSGMP CRPV+EGG GFDYRLG DK
Sbjct: 368 LNVDTDALNYLGLANHLLHTIDSRIITIAEDVSGMPTLCRPVSEGGIGFDYRLGMAIPDK 427
>UNIPROTKB|F1PX32 [details] [associations]
symbol:GBE1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043169 "cation binding" evidence=IEA]
[GO:0005978 "glycogen biosynthetic process" evidence=IEA]
[GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds"
evidence=IEA] [GO:0003844 "1,4-alpha-glucan branching enzyme
activity" evidence=IEA] InterPro:IPR004193 InterPro:IPR006047
InterPro:IPR006048 InterPro:IPR006407 InterPro:IPR013781
InterPro:IPR015902 Pfam:PF00128 Pfam:PF02806 Pfam:PF02922
PIRSF:PIRSF000463 InterPro:IPR013780 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0043169 Gene3D:3.20.20.80
InterPro:IPR017853 SUPFAM:SSF51445 Gene3D:2.60.40.1180
PANTHER:PTHR10357 GO:GO:0004553 GO:GO:0005978 InterPro:IPR014756
SUPFAM:SSF81296 GO:GO:0003844 KO:K00700 OMA:EIDPYLK CTD:2632
GeneTree:ENSGT00390000017040 EMBL:AAEX03016422 EMBL:AAEX03016423
RefSeq:XP_535555.3 Ensembl:ENSCAFT00000012537 GeneID:478380
KEGG:cfa:478380 Uniprot:F1PX32
Length = 699
Score = 709 (254.6 bits), Expect = 5.5e-70, P = 5.5e-70
Identities = 128/180 (71%), Positives = 145/180 (80%)
Query: 44 FGTPEQLKYLVDECHKAGLYVLLDVVHSHASKNVLDGLNEFDGTQACFFHDGPRGTHPLW 103
+GTPE+LK L+D H G+ VLLDVVHSHASKN DGLN FDGT +C+FH GPRG H LW
Sbjct: 260 YGTPEELKELIDTAHSMGITVLLDVVHSHASKNSEDGLNMFDGTDSCYFHSGPRGNHDLW 319
Query: 104 DSRLFNYSEIEVLRFLLSNLRWYLEEYQFDGFRFDGVTSMLYHNHGCGEGFSGHYDEYFG 163
DSRLF YS EVLRFLLSN+RW+LEEY FDGFRFDGVTSMLYH+HG GEGFSG Y EYFG
Sbjct: 320 DSRLFAYSSWEVLRFLLSNIRWWLEEYYFDGFRFDGVTSMLYHHHGMGEGFSGDYHEYFG 379
Query: 164 LNVDTDALIYLMVANKFLHDKYPEIITIAEDVSGMPASCRPVTEGGTGFDYRLGRPGLDK 223
L VD DAL+YLM+AN +H YP+ IT+AEDVSGMPA C P+++GG GFDYRL DK
Sbjct: 380 LQVDEDALVYLMLANHLVHTLYPDSITVAEDVSGMPALCSPISQGGVGFDYRLAMAIPDK 439
>MGI|MGI:1921435 [details] [associations]
symbol:Gbe1 "glucan (1,4-alpha-), branching enzyme 1"
species:10090 "Mus musculus" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003844 "1,4-alpha-glucan branching enzyme
activity" evidence=ISO] [GO:0004553 "hydrolase activity,
hydrolyzing O-glycosyl compounds" evidence=IEA] [GO:0005975
"carbohydrate metabolic process" evidence=IEA] [GO:0005978
"glycogen biosynthetic process" evidence=ISO] [GO:0016740
"transferase activity" evidence=IEA] [GO:0016757 "transferase
activity, transferring glycosyl groups" evidence=IEA] [GO:0030246
"carbohydrate binding" evidence=ISO] [GO:0043169 "cation binding"
evidence=IEA] InterPro:IPR004193 InterPro:IPR006047
InterPro:IPR006048 InterPro:IPR006407 InterPro:IPR013781
InterPro:IPR015902 Pfam:PF00128 Pfam:PF02806 Pfam:PF02922
PIRSF:PIRSF000463 UniPathway:UPA00164 InterPro:IPR013780
MGI:MGI:1921435 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0043169
Gene3D:3.20.20.80 InterPro:IPR017853 SUPFAM:SSF51445 CAZy:GH13
Gene3D:2.60.40.1180 PANTHER:PTHR10357 GO:GO:0004553 CAZy:CBM48
GO:GO:0005978 InterPro:IPR014756 SUPFAM:SSF81296 GO:GO:0003844
eggNOG:COG0296 HOGENOM:HOG000175159 KO:K00700 OMA:EIDPYLK CTD:2632
HOVERGEN:HBG051734 OrthoDB:EOG4F1X2K EMBL:AK009815 EMBL:AK050365
EMBL:BC017541 IPI:IPI00109823 RefSeq:NP_083079.1 UniGene:Mm.396102
ProteinModelPortal:Q9D6Y9 SMR:Q9D6Y9 STRING:Q9D6Y9
PhosphoSite:Q9D6Y9 PaxDb:Q9D6Y9 PRIDE:Q9D6Y9
Ensembl:ENSMUST00000163832 GeneID:74185 KEGG:mmu:74185
UCSC:uc007zqu.1 GeneTree:ENSGT00390000017040 InParanoid:Q9D6Y9
NextBio:340028 Bgee:Q9D6Y9 CleanEx:MM_GBE1 Genevestigator:Q9D6Y9
GermOnline:ENSMUSG00000022707 Uniprot:Q9D6Y9
Length = 702
Score = 707 (253.9 bits), Expect = 8.9e-70, P = 8.9e-70
Identities = 131/180 (72%), Positives = 145/180 (80%)
Query: 44 FGTPEQLKYLVDECHKAGLYVLLDVVHSHASKNVLDGLNEFDGTQACFFHDGPRGTHPLW 103
+GTPE+LK LVD H G+ VLLDVVHSHASKN DGLN FDGT +C+FH GPRGTH LW
Sbjct: 263 YGTPEELKELVDTAHSMGIVVLLDVVHSHASKNSEDGLNMFDGTDSCYFHSGPRGTHDLW 322
Query: 104 DSRLFNYSEIEVLRFLLSNLRWYLEEYQFDGFRFDGVTSMLYHNHGCGEGFSGHYDEYFG 163
DSRLF YS EVLRFLLSN+RW+LEEY FDGFRFDGVTSMLYH+HG G+GFSG Y+EYFG
Sbjct: 323 DSRLFIYSSWEVLRFLLSNIRWWLEEYCFDGFRFDGVTSMLYHHHGMGQGFSGDYNEYFG 382
Query: 164 LNVDTDALIYLMVANKFLHDKYPEIITIAEDVSGMPASCRPVTEGGTGFDYRLGRPGLDK 223
L VD DALIYLM+AN H YP+ ITIAEDVSGMPA C P ++GG GFDYRL DK
Sbjct: 383 LQVDEDALIYLMLANHLAHTLYPDSITIAEDVSGMPALCSPTSQGGGGFDYRLAMAIPDK 442
>RGD|1309968 [details] [associations]
symbol:Gbe1 "glucan (1,4-alpha-), branching enzyme 1"
species:10116 "Rattus norvegicus" [GO:0003844 "1,4-alpha-glucan
branching enzyme activity" evidence=IDA] [GO:0005978 "glycogen
biosynthetic process" evidence=IDA] [GO:0030246 "carbohydrate
binding" evidence=IDA] InterPro:IPR006047 InterPro:IPR006048
InterPro:IPR006407 InterPro:IPR013781 InterPro:IPR015902
Pfam:PF00128 Pfam:PF02806 PIRSF:PIRSF000463 InterPro:IPR013780
RGD:1309968 GO:GO:0043169 Gene3D:3.20.20.80 InterPro:IPR017853
SUPFAM:SSF51445 CAZy:GH13 Gene3D:2.60.40.1180 PANTHER:PTHR10357
GO:GO:0030246 GO:GO:0005978 GO:GO:0003844 KO:K00700 CTD:2632
HOVERGEN:HBG051734 IPI:IPI00363180 EMBL:BC090037
RefSeq:NP_001093972.1 UniGene:Rn.29938 ProteinModelPortal:Q5EB55
PRIDE:Q5EB55 GeneID:288333 KEGG:rno:288333 UCSC:RGD:1309968
NextBio:627978 Genevestigator:Q5EB55 Uniprot:Q5EB55
Length = 536
Score = 704 (252.9 bits), Expect = 1.8e-69, P = 1.8e-69
Identities = 130/180 (72%), Positives = 144/180 (80%)
Query: 44 FGTPEQLKYLVDECHKAGLYVLLDVVHSHASKNVLDGLNEFDGTQACFFHDGPRGTHPLW 103
+GTPE+LK LVD H G+ VLLDVVHSHASKN DGLN FDGT +C+FH GPRGTH LW
Sbjct: 97 YGTPEELKELVDTAHLMGIVVLLDVVHSHASKNSEDGLNMFDGTDSCYFHSGPRGTHDLW 156
Query: 104 DSRLFNYSEIEVLRFLLSNLRWYLEEYQFDGFRFDGVTSMLYHNHGCGEGFSGHYDEYFG 163
DSRLF YS EVLRFLLSN+RW+LEEY FDGFRFDGVTSMLYH+HG G+GFSG Y EYFG
Sbjct: 157 DSRLFIYSSWEVLRFLLSNIRWWLEEYCFDGFRFDGVTSMLYHHHGMGQGFSGDYSEYFG 216
Query: 164 LNVDTDALIYLMVANKFLHDKYPEIITIAEDVSGMPASCRPVTEGGTGFDYRLGRPGLDK 223
L VD DAL+YLM+AN H YP+ ITIAEDVSGMPA C P ++GG GFDYRL DK
Sbjct: 217 LQVDEDALVYLMLANHLTHTMYPDSITIAEDVSGMPALCSPTSQGGGGFDYRLAMAIPDK 276
>ZFIN|ZDB-GENE-110914-16 [details] [associations]
symbol:si:ch211-247m23.1 "si:ch211-247m23.1"
species:7955 "Danio rerio" [GO:0043169 "cation binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0003844 "1,4-alpha-glucan branching enzyme activity"
evidence=IEA] [GO:0005975 "carbohydrate metabolic process"
evidence=IEA] [GO:0005978 "glycogen biosynthetic process"
evidence=IEA] [GO:0004553 "hydrolase activity, hydrolyzing
O-glycosyl compounds" evidence=IEA] InterPro:IPR004193
InterPro:IPR006047 InterPro:IPR006048 InterPro:IPR006407
InterPro:IPR013781 InterPro:IPR015902 Pfam:PF00128 Pfam:PF02806
Pfam:PF02922 PIRSF:PIRSF000463 InterPro:IPR013780
ZFIN:ZDB-GENE-110914-16 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0043169 Gene3D:3.20.20.80 InterPro:IPR017853 SUPFAM:SSF51445
Gene3D:2.60.40.1180 PANTHER:PTHR10357 GO:GO:0004553 GO:GO:0005978
InterPro:IPR014756 SUPFAM:SSF81296 GO:GO:0003844
GeneTree:ENSGT00390000017040 EMBL:CR753871 EMBL:CR854842
EMBL:CU013513 Ensembl:ENSDART00000150771 Uniprot:H0WF64
Length = 630
Score = 701 (251.8 bits), Expect = 3.8e-69, P = 3.8e-69
Identities = 128/180 (71%), Positives = 144/180 (80%)
Query: 44 FGTPEQLKYLVDECHKAGLYVLLDVVHSHASKNVLDGLNEFDGTQACFFHDGPRGTHPLW 103
+GTPE+LK L+D H G+ VLLDVVHSHASKN DGLN FDG+ +CFFH GPRG H LW
Sbjct: 248 YGTPEELKELIDVAHSLGIIVLLDVVHSHASKNTEDGLNLFDGSDSCFFHSGPRGEHSLW 307
Query: 104 DSRLFNYSEIEVLRFLLSNLRWYLEEYQFDGFRFDGVTSMLYHNHGCGEGFSGHYDEYFG 163
DSRLFNYS EVLRFLLSNLRW++EEY+FDGFRFDGVTSMLYH+HG G GFSG Y+EYFG
Sbjct: 308 DSRLFNYSSWEVLRFLLSNLRWWMEEYKFDGFRFDGVTSMLYHHHGIGSGFSGDYNEYFG 367
Query: 164 LNVDTDALIYLMVANKFLHDKYPEIITIAEDVSGMPASCRPVTEGGTGFDYRLGRPGLDK 223
L VD D+L+YLM+AN LH Y + ITIAEDVSGMP C PV +GG GFDYRL DK
Sbjct: 368 LQVDEDSLVYLMLANHILHTLYEDCITIAEDVSGMPTLCCPVQQGGLGFDYRLAMAIPDK 427
>UNIPROTKB|E9PGM4 [details] [associations]
symbol:GBE1 "1,4-alpha-glucan-branching enzyme"
species:9606 "Homo sapiens" [GO:0003844 "1,4-alpha-glucan branching
enzyme activity" evidence=IEA] [GO:0004553 "hydrolase activity,
hydrolyzing O-glycosyl compounds" evidence=IEA] [GO:0005978
"glycogen biosynthetic process" evidence=IEA] [GO:0043169 "cation
binding" evidence=IEA] InterPro:IPR004193 InterPro:IPR006047
InterPro:IPR006048 InterPro:IPR006407 InterPro:IPR013781
InterPro:IPR015902 Pfam:PF00128 Pfam:PF02806 Pfam:PF02922
PIRSF:PIRSF000463 InterPro:IPR013780 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0043169 Gene3D:3.20.20.80
InterPro:IPR017853 SUPFAM:SSF51445 Gene3D:2.60.40.1180
PANTHER:PTHR10357 GO:GO:0004553 GO:GO:0005978 InterPro:IPR014756
SUPFAM:SSF81296 GO:GO:0003844 EMBL:AC017015 EMBL:AC025029
EMBL:AC099049 HGNC:HGNC:4180 ChiTaRS:GBE1 IPI:IPI00789251
ProteinModelPortal:E9PGM4 SMR:E9PGM4 Ensembl:ENST00000489715
UCSC:uc021xax.1 ArrayExpress:E9PGM4 Bgee:E9PGM4 Uniprot:E9PGM4
Length = 661
Score = 699 (251.1 bits), Expect = 6.3e-69, P = 6.3e-69
Identities = 127/180 (70%), Positives = 145/180 (80%)
Query: 44 FGTPEQLKYLVDECHKAGLYVLLDVVHSHASKNVLDGLNEFDGTQACFFHDGPRGTHPLW 103
+GTPE+L+ LVD H G+ VLLDVVHSHASKN DGLN FDGT +C+FH GPRGTH LW
Sbjct: 222 YGTPEELQELVDTAHSMGIIVLLDVVHSHASKNSADGLNMFDGTDSCYFHSGPRGTHDLW 281
Query: 104 DSRLFNYSEIEVLRFLLSNLRWYLEEYQFDGFRFDGVTSMLYHNHGCGEGFSGHYDEYFG 163
DSRLF YS E+LRFLLSN+RW+LEEY+FDGFRFDGVTSMLYH+HG G+GFSG Y EYFG
Sbjct: 282 DSRLFAYSSWEILRFLLSNIRWWLEEYRFDGFRFDGVTSMLYHHHGVGQGFSGDYSEYFG 341
Query: 164 LNVDTDALIYLMVANKFLHDKYPEIITIAEDVSGMPASCRPVTEGGTGFDYRLGRPGLDK 223
L VD DAL YLM+AN +H P+ ITIAEDVSGMPA C P+++GG GFDYRL DK
Sbjct: 342 LQVDEDALTYLMLANHLVHTLCPDSITIAEDVSGMPALCSPISQGGGGFDYRLAMAIPDK 401
>UNIPROTKB|Q04446 [details] [associations]
symbol:GBE1 "1,4-alpha-glucan-branching enzyme"
species:9606 "Homo sapiens" [GO:0004553 "hydrolase activity,
hydrolyzing O-glycosyl compounds" evidence=IEA] [GO:0043169 "cation
binding" evidence=IEA] [GO:0003844 "1,4-alpha-glucan branching
enzyme activity" evidence=IEA] [GO:0005978 "glycogen biosynthetic
process" evidence=IEA;TAS] [GO:0005977 "glycogen metabolic process"
evidence=TAS] [GO:0006091 "generation of precursor metabolites and
energy" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0005975 "carbohydrate metabolic process" evidence=TAS]
[GO:0006006 "glucose metabolic process" evidence=TAS] [GO:0044281
"small molecule metabolic process" evidence=TAS]
Reactome:REACT_111217 InterPro:IPR004193 InterPro:IPR006047
InterPro:IPR006048 InterPro:IPR006407 InterPro:IPR013781
InterPro:IPR015902 Pfam:PF00128 Pfam:PF02806 Pfam:PF02922
PIRSF:PIRSF000463 UniPathway:UPA00164 InterPro:IPR013780
GO:GO:0005829 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0044281
GO:GO:0043169 Gene3D:3.20.20.80 InterPro:IPR017853 SUPFAM:SSF51445
CAZy:GH13 Gene3D:2.60.40.1180 PANTHER:PTHR10357 GO:GO:0004553
CAZy:CBM48 GO:GO:0005978 GO:GO:0006006 InterPro:IPR014756
SUPFAM:SSF81296 GO:GO:0003844 eggNOG:COG0296 KO:K00700 EMBL:L07956
EMBL:AK125918 EMBL:AC017015 EMBL:AC025029 EMBL:AC099049
EMBL:BC012098 IPI:IPI00296635 PIR:A46075 RefSeq:NP_000149.3
UniGene:Hs.436062 ProteinModelPortal:Q04446 SMR:Q04446
IntAct:Q04446 MINT:MINT-1415803 STRING:Q04446 PhosphoSite:Q04446
DMDM:67465046 PaxDb:Q04446 PRIDE:Q04446 DNASU:2632
Ensembl:ENST00000429644 GeneID:2632 KEGG:hsa:2632 UCSC:uc021xav.1
CTD:2632 GeneCards:GC03M081621 HGNC:HGNC:4180 HPA:HPA038073
HPA:HPA038074 HPA:HPA038075 MIM:232500 MIM:263570 MIM:607839
neXtProt:NX_Q04446 Orphanet:206583 Orphanet:367 PharmGKB:PA28594
HOVERGEN:HBG051734 InParanoid:Q04446 OrthoDB:EOG4F1X2K
BioCyc:MetaCyc:HS03772-MONOMER ChiTaRS:GBE1 GenomeRNAi:2632
NextBio:10376 ArrayExpress:Q04446 Bgee:Q04446 CleanEx:HS_GBE1
Genevestigator:Q04446 GermOnline:ENSG00000114480 Uniprot:Q04446
Length = 702
Score = 699 (251.1 bits), Expect = 6.3e-69, P = 6.3e-69
Identities = 127/180 (70%), Positives = 145/180 (80%)
Query: 44 FGTPEQLKYLVDECHKAGLYVLLDVVHSHASKNVLDGLNEFDGTQACFFHDGPRGTHPLW 103
+GTPE+L+ LVD H G+ VLLDVVHSHASKN DGLN FDGT +C+FH GPRGTH LW
Sbjct: 263 YGTPEELQELVDTAHSMGIIVLLDVVHSHASKNSADGLNMFDGTDSCYFHSGPRGTHDLW 322
Query: 104 DSRLFNYSEIEVLRFLLSNLRWYLEEYQFDGFRFDGVTSMLYHNHGCGEGFSGHYDEYFG 163
DSRLF YS E+LRFLLSN+RW+LEEY+FDGFRFDGVTSMLYH+HG G+GFSG Y EYFG
Sbjct: 323 DSRLFAYSSWEILRFLLSNIRWWLEEYRFDGFRFDGVTSMLYHHHGVGQGFSGDYSEYFG 382
Query: 164 LNVDTDALIYLMVANKFLHDKYPEIITIAEDVSGMPASCRPVTEGGTGFDYRLGRPGLDK 223
L VD DAL YLM+AN +H P+ ITIAEDVSGMPA C P+++GG GFDYRL DK
Sbjct: 383 LQVDEDALTYLMLANHLVHTLCPDSITIAEDVSGMPALCSPISQGGGGFDYRLAMAIPDK 442
>UNIPROTKB|F1MZP0 [details] [associations]
symbol:GBE1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043169 "cation binding" evidence=IEA] [GO:0005978
"glycogen biosynthetic process" evidence=IEA] [GO:0004553
"hydrolase activity, hydrolyzing O-glycosyl compounds"
evidence=IEA] [GO:0003844 "1,4-alpha-glucan branching enzyme
activity" evidence=IEA] InterPro:IPR004193 InterPro:IPR006047
InterPro:IPR006048 InterPro:IPR006407 InterPro:IPR013781
InterPro:IPR015902 Pfam:PF00128 Pfam:PF02806 Pfam:PF02922
PIRSF:PIRSF000463 InterPro:IPR013780 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0043169 Gene3D:3.20.20.80
InterPro:IPR017853 SUPFAM:SSF51445 Gene3D:2.60.40.1180
PANTHER:PTHR10357 GO:GO:0004553 GO:GO:0005978 InterPro:IPR014756
SUPFAM:SSF81296 GO:GO:0003844 OMA:EIDPYLK
GeneTree:ENSGT00390000017040 EMBL:DAAA02000685 EMBL:DAAA02000686
EMBL:DAAA02000687 EMBL:DAAA02000688 EMBL:DAAA02000689
EMBL:DAAA02000690 EMBL:DAAA02000691 EMBL:DAAA02000692
IPI:IPI01027954 Ensembl:ENSBTAT00000050765 Uniprot:F1MZP0
Length = 655
Score = 695 (249.7 bits), Expect = 1.7e-68, P = 1.7e-68
Identities = 128/180 (71%), Positives = 145/180 (80%)
Query: 44 FGTPEQLKYLVDECHKAGLYVLLDVVHSHASKNVLDGLNEFDGTQACFFHDGPRGTHPLW 103
+GTPE+LK LVD H G+ VLLDVVHSHASKN DGLN FDGT++C+FH GPRGTH LW
Sbjct: 216 YGTPEELKELVDTAHSMGITVLLDVVHSHASKNSEDGLNMFDGTESCYFHYGPRGTHLLW 275
Query: 104 DSRLFNYSEIEVLRFLLSNLRWYLEEYQFDGFRFDGVTSMLYHNHGCGEGFSGHYDEYFG 163
DSRLF Y+ EVLRFLLSN+RW+LEEY FDGFRFDGVTSMLYH+HG GE FSG Y EYFG
Sbjct: 276 DSRLFAYASWEVLRFLLSNIRWWLEEYGFDGFRFDGVTSMLYHHHGIGENFSGDYHEYFG 335
Query: 164 LNVDTDALIYLMVANKFLHDKYPEIITIAEDVSGMPASCRPVTEGGTGFDYRLGRPGLDK 223
L VD DAL Y+M+AN +H YP+ ITIAEDVSGMPA C P+++GG GFDYRL DK
Sbjct: 336 LQVDEDALTYIMLANHLVHTLYPDSITIAEDVSGMPALCSPISQGGGGFDYRLAMAIPDK 395
>ZFIN|ZDB-GENE-110411-171 [details] [associations]
symbol:si:ch211-213e17.1 "si:ch211-213e17.1"
species:7955 "Danio rerio" [GO:0043169 "cation binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0003844 "1,4-alpha-glucan branching enzyme activity"
evidence=IEA] [GO:0005975 "carbohydrate metabolic process"
evidence=IEA] [GO:0005978 "glycogen biosynthetic process"
evidence=IEA] [GO:0004553 "hydrolase activity, hydrolyzing
O-glycosyl compounds" evidence=IEA] InterPro:IPR004193
InterPro:IPR006047 InterPro:IPR006048 InterPro:IPR006407
InterPro:IPR013781 InterPro:IPR015902 Pfam:PF00128 Pfam:PF02806
Pfam:PF02922 PIRSF:PIRSF000463 InterPro:IPR013780
ZFIN:ZDB-GENE-110411-171 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0043169 Gene3D:3.20.20.80 InterPro:IPR017853 SUPFAM:SSF51445
Gene3D:2.60.40.1180 PANTHER:PTHR10357 GO:GO:0004553 GO:GO:0005978
InterPro:IPR014756 SUPFAM:SSF81296 GO:GO:0003844
GeneTree:ENSGT00390000017040 EMBL:BX537292 EMBL:CU075735
EMBL:CU915763 IPI:IPI01024250 Ensembl:ENSDART00000149265
Uniprot:F8W5I0
Length = 688
Score = 686 (246.5 bits), Expect = 1.5e-67, P = 1.5e-67
Identities = 126/180 (70%), Positives = 141/180 (78%)
Query: 44 FGTPEQLKYLVDECHKAGLYVLLDVVHSHASKNVLDGLNEFDGTQACFFHDGPRGTHPLW 103
FGTP+ LK+LVD H G+ VLLDVVHSHAS N DGLN FDGT +CFFH G RG H LW
Sbjct: 247 FGTPDDLKHLVDTAHSMGIAVLLDVVHSHASSNTEDGLNYFDGTDSCFFHGGSRGKHSLW 306
Query: 104 DSRLFNYSEIEVLRFLLSNLRWYLEEYQFDGFRFDGVTSMLYHNHGCGEGFSGHYDEYFG 163
DSRLFNYS EVLRFLLSNLRW++EEY+FDGFRFDGVTSMLYH+HG FSG+Y EYFG
Sbjct: 307 DSRLFNYSSWEVLRFLLSNLRWWMEEYRFDGFRFDGVTSMLYHHHGIDTSFSGNYSEYFG 366
Query: 164 LNVDTDALIYLMVANKFLHDKYPEIITIAEDVSGMPASCRPVTEGGTGFDYRLGRPGLDK 223
+ VD +ALIYLM+AN LH YP+ IT+AEDVSGMP CR + EGG GFDYRL DK
Sbjct: 367 MQVDENALIYLMLANHILHRLYPQCITVAEDVSGMPGLCRAIEEGGLGFDYRLTMAVPDK 426
>UNIPROTKB|E1C303 [details] [associations]
symbol:GBE1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003844 "1,4-alpha-glucan branching enzyme activity"
evidence=IEA] [GO:0004553 "hydrolase activity, hydrolyzing
O-glycosyl compounds" evidence=IEA] [GO:0005978 "glycogen
biosynthetic process" evidence=IEA] [GO:0043169 "cation binding"
evidence=IEA] InterPro:IPR004193 InterPro:IPR006047
InterPro:IPR006407 InterPro:IPR013781 InterPro:IPR015902
Pfam:PF00128 Pfam:PF02922 PIRSF:PIRSF000463 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0043169 Gene3D:3.20.20.80
InterPro:IPR017853 SUPFAM:SSF51445 PANTHER:PTHR10357 GO:GO:0004553
GO:GO:0005978 InterPro:IPR014756 SUPFAM:SSF81296 GO:GO:0003844
OMA:IAVIMDI GeneTree:ENSGT00390000017040 EMBL:AADN02042252
EMBL:AADN02042253 EMBL:AADN02042254 EMBL:AADN02042255
EMBL:AADN02042256 EMBL:AADN02042257 IPI:IPI00596853
ProteinModelPortal:E1C303 Ensembl:ENSGALT00000025002 Uniprot:E1C303
Length = 588
Score = 678 (243.7 bits), Expect = 1.1e-66, P = 1.1e-66
Identities = 125/180 (69%), Positives = 146/180 (81%)
Query: 44 FGTPEQLKYLVDECHKAGLYVLLDVVHSHASKNVLDGLNEFDGTQACFFHDGPRGTHPLW 103
+GTP+ LK L+D H G+ VLLDVVHSHASKN DGLN+FDGT +CFFH GPRGTH +W
Sbjct: 249 YGTPDDLKELIDVAHSMGITVLLDVVHSHASKNSEDGLNKFDGTDSCFFHSGPRGTHRIW 308
Query: 104 DSRLFNYSEIEVLRFLLSNLRWYLEEYQFDGFRFDGVTSMLYHNHGCGEGFSGHYDEYFG 163
DSRLF+Y+ EVLRFLLSNLR ++E+Y FDGFRFDGVTSMLYH+HG G+ FSG Y+EYFG
Sbjct: 309 DSRLFDYANWEVLRFLLSNLRMWIEDYGFDGFRFDGVTSMLYHDHGIGKEFSGDYNEYFG 368
Query: 164 LNVDTDALIYLMVANKFLHDKYPEIITIAEDVSGMPASCRPVTEGGTGFDYRLGRPGLDK 223
L+VD DAL YLM+AN ++ +P+ ITIAEDVSGMPA CRPV EGG GFDYRL DK
Sbjct: 369 LDVDEDALCYLMLANHMINFLHPDCITIAEDVSGMPALCRPVAEGGGGFDYRLAMAIPDK 428
>WB|WBGene00011409 [details] [associations]
symbol:T04A8.7 species:6239 "Caenorhabditis elegans"
[GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds"
evidence=IEA] [GO:0005975 "carbohydrate metabolic process"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0043169 "cation binding" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0010171 "body morphogenesis" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] InterPro:IPR004193
InterPro:IPR006047 InterPro:IPR006048 InterPro:IPR006407
InterPro:IPR013781 InterPro:IPR015902 Pfam:PF00128 Pfam:PF02806
Pfam:PF02922 PIRSF:PIRSF000463 InterPro:IPR013780 EMBL:Z35663
GO:GO:0009792 GO:GO:0040010 GO:GO:0006915 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0043169 Gene3D:3.20.20.80
InterPro:IPR017853 SUPFAM:SSF51445 CAZy:GH13 Gene3D:2.60.40.1180
PANTHER:PTHR10357 GO:GO:0004553 GO:GO:0010171 GO:GO:0048477
CAZy:CBM48 GO:GO:0005978 InterPro:IPR014756 SUPFAM:SSF81296
GO:GO:0003844 HSSP:P07762 eggNOG:COG0296 HOGENOM:HOG000175159
KO:K00700 GeneTree:ENSGT00390000017040 PIR:T24426
RefSeq:NP_497961.1 UniGene:Cel.17078 ProteinModelPortal:Q22137
SMR:Q22137 IntAct:Q22137 STRING:Q22137 PaxDb:Q22137 PRIDE:Q22137
EnsemblMetazoa:T04A8.7a.1 EnsemblMetazoa:T04A8.7a.2 GeneID:3565201
KEGG:cel:CELE_T04A8.7 UCSC:T04A8.7a CTD:3565201 WormBase:T04A8.7a
InParanoid:Q22137 OMA:TSMLYKH NextBio:955579 ArrayExpress:Q22137
Uniprot:Q22137
Length = 681
Score = 672 (241.6 bits), Expect = 4.5e-66, P = 4.5e-66
Identities = 119/172 (69%), Positives = 142/172 (82%)
Query: 45 GTPEQLKYLVDECHKAGLYVLLDVVHSHASKNVLDGLNEFDGTQACFFHDGPRGTHPLWD 104
GTPE LKYLVD+ H G+++LLDVVHSHASKNV DGLN++DG+ +FHD RG H LWD
Sbjct: 245 GTPEDLKYLVDKAHSLGIFMLLDVVHSHASKNVEDGLNQWDGSNGGYFHDNARGYHNLWD 304
Query: 105 SRLFNYSEIEVLRFLLSNLRWYLEEYQFDGFRFDGVTSMLYHNHGCGEGFSGHYDEYFGL 164
SRLF+Y++ E LRFLLSN+RW++EEY FDGFRFDGV+SM+YH+HG + F G Y YFGL
Sbjct: 305 SRLFDYTQTETLRFLLSNVRWWVEEYGFDGFRFDGVSSMIYHSHGMNDDFCGGYPMYFGL 364
Query: 165 NVDTDALIYLMVANKFLHDKYPEIITIAEDVSGMPASCRPVTEGGTGFDYRL 216
N DTD+L+YLM+AN FLH KYP +ITIAE+VSGMP CRPV EGG GFDYRL
Sbjct: 365 NADTDSLVYLMLANDFLHKKYPFMITIAEEVSGMPGICRPVEEGGQGFDYRL 416
>UNIPROTKB|G4NAD9 [details] [associations]
symbol:MGG_03186 "1,4-alpha-glucan-branching enzyme"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR004193
InterPro:IPR006047 InterPro:IPR006048 InterPro:IPR006407
InterPro:IPR013781 InterPro:IPR015902 Pfam:PF00128 Pfam:PF02806
Pfam:PF02922 PIRSF:PIRSF000463 InterPro:IPR013780 GO:GO:0005737
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0043169
Gene3D:3.20.20.80 InterPro:IPR017853 SUPFAM:SSF51445
Gene3D:2.60.40.1180 PANTHER:PTHR10357 GO:GO:0004553 GO:GO:0005978
InterPro:IPR014756 SUPFAM:SSF81296 EMBL:CM001234 GO:GO:0003844
KO:K00700 RefSeq:XP_003716803.1 ProteinModelPortal:G4NAD9
EnsemblFungi:MGG_03186T0 GeneID:2676993 KEGG:mgr:MGG_03186
Uniprot:G4NAD9
Length = 691
Score = 658 (236.7 bits), Expect = 1.4e-64, P = 1.4e-64
Identities = 121/173 (69%), Positives = 140/173 (80%)
Query: 44 FGTPEQLKYLVDECHKAGLYVLLDVVHSHASKNVLDGLNEFDGTQACFFHDGPRGTHPLW 103
+GTPE LK L+D H GL VLLDVVHSHASKNVLDG+NEFDGT +FH G +G H W
Sbjct: 256 YGTPEDLKELIDAAHGMGLTVLLDVVHSHASKNVLDGINEFDGTDHQYFHAGGKGRHDQW 315
Query: 104 DSRLFNYSEIEVLRFLLSNLRWYLEEYQFDGFRFDGVTSMLYHNHGCGEGFSGHYDEYFG 163
DSRLFNY EVLRFLLSNLR++++EYQFDGFRFDGVTSMLY +HG G GFSG Y EYFG
Sbjct: 316 DSRLFNYGHHEVLRFLLSNLRFWMDEYQFDGFRFDGVTSMLYLHHGMGTGFSGGYHEYFG 375
Query: 164 LNVDTDALIYLMVANKFLHDKYPEIITIAEDVSGMPASCRPVTEGGTGFDYRL 216
+ D +AL+YLM+ANK LH+ YPE+I+IAEDVSGMP C P ++GG GFDYRL
Sbjct: 376 PDADEEALVYLMLANKMLHELYPEVISIAEDVSGMPTLCLPWSDGGVGFDYRL 428
>TAIR|locus:2144608 [details] [associations]
symbol:SBE2.2 "starch branching enzyme 2.2" species:3702
"Arabidopsis thaliana" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0004553 "hydrolase activity, hydrolyzing
O-glycosyl compounds" evidence=IEA] [GO:0005975 "carbohydrate
metabolic process" evidence=IEA] [GO:0043169 "cation binding"
evidence=IEA] [GO:0009570 "chloroplast stroma" evidence=IDA]
[GO:0003844 "1,4-alpha-glucan branching enzyme activity"
evidence=ISS;IDA] [GO:0005982 "starch metabolic process"
evidence=RCA;IMP] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0000023 "maltose metabolic process" evidence=RCA] [GO:0006098
"pentose-phosphate shunt" evidence=RCA] [GO:0019252 "starch
biosynthetic process" evidence=RCA] [GO:0019288 "isopentenyl
diphosphate biosynthetic process, mevalonate-independent pathway"
evidence=RCA] [GO:0019760 "glucosinolate metabolic process"
evidence=RCA] [GO:0043085 "positive regulation of catalytic
activity" evidence=RCA] [GO:0010021 "amylopectin biosynthetic
process" evidence=TAS] InterPro:IPR004193 InterPro:IPR006047
InterPro:IPR006048 InterPro:IPR006407 InterPro:IPR013781
InterPro:IPR015902 Pfam:PF00128 Pfam:PF02806 Pfam:PF02922
PIRSF:PIRSF000463 UniPathway:UPA00152 InterPro:IPR013780
EMBL:CP002688 GO:GO:0009570 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0071333 GO:GO:0043169 Gene3D:3.20.20.80 InterPro:IPR017853
SUPFAM:SSF51445 CAZy:GH13 Gene3D:2.60.40.1180 PANTHER:PTHR10357
GO:GO:0004553 CAZy:CBM48 GO:GO:0005978 InterPro:IPR014756
SUPFAM:SSF81296 GO:GO:0071329 EMBL:AL162506 GO:GO:0003844
GO:GO:0071482 GO:GO:0009501 GO:GO:0005982 UniGene:At.24317
HSSP:P07762 eggNOG:COG0296 HOGENOM:HOG000175159 KO:K00700
ProtClustDB:PLN02447 GO:GO:0010021 GO:GO:0071332 GO:GO:0019252
EMBL:AJ005130 EMBL:U22428 EMBL:AK117729 IPI:IPI00518558 PIR:S65046
PIR:T48392 RefSeq:NP_195985.3 UniGene:At.4765
ProteinModelPortal:Q9LZS3 SMR:Q9LZS3 STRING:Q9LZS3 PRIDE:Q9LZS3
EnsemblPlants:AT5G03650.1 GeneID:831769 KEGG:ath:AT5G03650
TAIR:At5g03650 InParanoid:Q9LZS3 OMA:NDANWIE PhylomeDB:Q9LZS3
Genevestigator:Q9LZS3 Uniprot:Q9LZS3
Length = 805
Score = 653 (234.9 bits), Expect = 4.7e-64, P = 4.7e-64
Identities = 118/179 (65%), Positives = 137/179 (76%)
Query: 45 GTPEQLKYLVDECHKAGLYVLLDVVHSHASKNVLDGLNEFDGTQACFFHDGPRGTHPLWD 104
GTPE+LK L+D H+ GL VL+D+VHSHASKN LDGLN FDGT A +FH GPRG H +WD
Sbjct: 358 GTPEELKSLIDRAHELGLVVLMDIVHSHASKNTLDGLNMFDGTDAHYFHSGPRGYHWMWD 417
Query: 105 SRLFNYSEIEVLRFLLSNLRWYLEEYQFDGFRFDGVTSMLYHNHGCGEGFSGHYDEYFGL 164
SRLFNY EVLR+LLSN RW+LEEY+FDGFRFDGVTSM+Y +HG GF+G+Y EYFGL
Sbjct: 418 SRLFNYGSWEVLRYLLSNARWWLEEYKFDGFRFDGVTSMMYTHHGLSVGFTGNYTEYFGL 477
Query: 165 NVDTDALIYLMVANKFLHDKYPEIITIAEDVSGMPASCRPVTEGGTGFDYRLGRPGLDK 223
D DA+ YLM+ N +H YPE IT+ EDVSGMP C PV +GG GFDYRL DK
Sbjct: 478 ETDVDAVNYLMLVNDMIHGLYPEAITVGEDVSGMPTFCIPVQDGGVGFDYRLHMAIADK 536
>TAIR|locus:2044903 [details] [associations]
symbol:SBE2.1 "starch branching enzyme 2.1" species:3702
"Arabidopsis thaliana" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0004553 "hydrolase activity, hydrolyzing
O-glycosyl compounds" evidence=IEA] [GO:0005975 "carbohydrate
metabolic process" evidence=IEA] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0043169 "cation binding" evidence=IEA]
[GO:0003844 "1,4-alpha-glucan branching enzyme activity"
evidence=ISS;IDA] [GO:0005982 "starch metabolic process"
evidence=RCA;IMP] [GO:0009570 "chloroplast stroma" evidence=IDA]
[GO:0000272 "polysaccharide catabolic process" evidence=RCA]
[GO:0009664 "plant-type cell wall organization" evidence=RCA]
[GO:0019252 "starch biosynthetic process" evidence=RCA] [GO:0010021
"amylopectin biosynthetic process" evidence=TAS] InterPro:IPR004193
InterPro:IPR006047 InterPro:IPR006048 InterPro:IPR006407
InterPro:IPR013781 InterPro:IPR015902 Pfam:PF00128 Pfam:PF02806
Pfam:PF02922 PIRSF:PIRSF000463 UniPathway:UPA00152
InterPro:IPR013780 GO:GO:0009570 Gene3D:2.60.40.10
InterPro:IPR013783 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0071333 GO:GO:0043169 Gene3D:3.20.20.80 InterPro:IPR017853
SUPFAM:SSF51445 CAZy:GH13 Gene3D:2.60.40.1180 PANTHER:PTHR10357
GO:GO:0004553 CAZy:CBM48 GO:GO:0005978 EMBL:AC006919
InterPro:IPR014756 SUPFAM:SSF81296 GO:GO:0071329 GO:GO:0003844
GO:GO:0071482 GO:GO:0009501 GO:GO:0005982 EMBL:AJ000497
EMBL:AY136411 EMBL:AK226896 EMBL:U18817 IPI:IPI00543392 PIR:B84780
PIR:S65045 RefSeq:NP_181180.1 UniGene:At.24317 UniGene:At.67284
HSSP:P07762 ProteinModelPortal:O23647 SMR:O23647 STRING:O23647
PaxDb:O23647 PRIDE:O23647 ProMEX:O23647 EnsemblPlants:AT2G36390.1
GeneID:818212 KEGG:ath:AT2G36390 TAIR:At2g36390 eggNOG:COG0296
HOGENOM:HOG000175159 InParanoid:O23647 KO:K00700 OMA:IAVIMDI
PhylomeDB:O23647 ProtClustDB:PLN02447 Genevestigator:O23647
GO:GO:0010021 GO:GO:0071332 GO:GO:0019252 Uniprot:O23647
Length = 858
Score = 632 (227.5 bits), Expect = 7.9e-62, P = 7.9e-62
Identities = 113/180 (62%), Positives = 137/180 (76%)
Query: 44 FGTPEQLKYLVDECHKAGLYVLLDVVHSHASKNVLDGLNEFDGTQACFFHDGPRGTHPLW 103
FGTP+ LK L+D+ H+ GL VL+D+VHSHASKN LDGL+ FDGT +FH G RG H +W
Sbjct: 392 FGTPDDLKSLIDKAHELGLVVLMDIVHSHASKNTLDGLDMFDGTDGQYFHSGSRGYHWMW 451
Query: 104 DSRLFNYSEIEVLRFLLSNLRWYLEEYQFDGFRFDGVTSMLYHNHGCGEGFSGHYDEYFG 163
DSRLFNY EVLR+LLSN RW+LEEY+FDGFRFDGVTSM+Y +HG F+G+Y+EYFG
Sbjct: 452 DSRLFNYGSWEVLRYLLSNARWWLEEYKFDGFRFDGVTSMMYTHHGLQVEFTGNYNEYFG 511
Query: 164 LNVDTDALIYLMVANKFLHDKYPEIITIAEDVSGMPASCRPVTEGGTGFDYRLGRPGLDK 223
+ D DA++YLM+ N +H YPE I + EDVSGMPA C PV +GG GFDYRL DK
Sbjct: 512 YSTDVDAVVYLMLVNDLIHGLYPEAIVVGEDVSGMPAFCVPVEDGGVGFDYRLHMAVADK 571
>UNIPROTKB|Q01401 [details] [associations]
symbol:SBE1 "1,4-alpha-glucan-branching enzyme,
chloroplastic/amyloplastic" species:39947 "Oryza sativa Japonica
Group" [GO:0003844 "1,4-alpha-glucan branching enzyme activity"
evidence=ISS] [GO:0005982 "starch metabolic process" evidence=ISS]
[GO:0009501 "amyloplast" evidence=ISS] InterPro:IPR004193
InterPro:IPR006047 InterPro:IPR006048 InterPro:IPR006407
InterPro:IPR013781 InterPro:IPR015902 Pfam:PF00128 Pfam:PF02806
Pfam:PF02922 PIRSF:PIRSF000463 UniPathway:UPA00152
InterPro:IPR013780 GO:GO:0009507 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0043169 Gene3D:3.20.20.80
InterPro:IPR017853 SUPFAM:SSF51445 CAZy:GH13 Gene3D:2.60.40.1180
PANTHER:PTHR10357 GO:GO:0004553 CAZy:CBM48 GO:GO:0005978
InterPro:IPR014756 SUPFAM:SSF81296 GO:GO:0003844 EMBL:AP003685
EMBL:AP004685 GO:GO:0009501 GO:GO:0005982 eggNOG:COG0296 KO:K00700
ProtClustDB:PLN02447 GO:GO:0019252 EMBL:D10752 EMBL:D10838
EMBL:D11082 EMBL:AY302112 EMBL:AF136268 EMBL:AK068920 PIR:JX0243
RefSeq:NP_001058629.1 UniGene:Os.22169 PDB:3AMK PDB:3AML
PDBsum:3AMK PDBsum:3AML ProteinModelPortal:Q01401 STRING:Q01401
EnsemblPlants:LOC_Os06g51084.1 GeneID:4342117 KEGG:osa:4342117
Gramene:Q01401 OMA:HFITMAL EvolutionaryTrace:Q01401 Uniprot:Q01401
Length = 820
Score = 625 (225.1 bits), Expect = 4.3e-61, P = 4.3e-61
Identities = 113/175 (64%), Positives = 135/175 (77%)
Query: 45 GTPEQLKYLVDECHKAGLYVLLDVVHSHASKNVLDGLNEFD---GTQACFFHDGPRGTHP 101
GTPE LKYLVD+ H GL VL+DVVHSHAS NV DGLN +D T +FH G RG H
Sbjct: 313 GTPEDLKYLVDKAHSLGLRVLMDVVHSHASNNVTDGLNGYDVGQNTHESYFHTGDRGYHK 372
Query: 102 LWDSRLFNYSEIEVLRFLLSNLRWYLEEYQFDGFRFDGVTSMLYHNHGCGEGFSGHYDEY 161
LWDSRLFNY+ EVLRFLLSNLR++++E+ FDGFRFDGVTSMLYH+HG +GF+G+Y EY
Sbjct: 373 LWDSRLFNYANWEVLRFLLSNLRYWMDEFMFDGFRFDGVTSMLYHHHGINKGFTGNYKEY 432
Query: 162 FGLNVDTDALIYLMVANKFLHDKYPEIITIAEDVSGMPASCRPVTEGGTGFDYRL 216
F L+ D DA++Y+M+AN +H PE +AEDVSGMP CRPV EGG GFD+RL
Sbjct: 433 FSLDTDVDAIVYMMLANHLMHKLLPEATIVAEDVSGMPVLCRPVDEGGVGFDFRL 487
>ASPGD|ASPL0000046871 [details] [associations]
symbol:AN2314 species:162425 "Emericella nidulans"
[GO:0005982 "starch metabolic process" evidence=RCA] [GO:0003844
"1,4-alpha-glucan branching enzyme activity" evidence=IEA;RCA]
[GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds"
evidence=IEA] [GO:0043169 "cation binding" evidence=IEA]
[GO:0005978 "glycogen biosynthetic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR004193
InterPro:IPR006047 InterPro:IPR006048 InterPro:IPR006407
InterPro:IPR013781 InterPro:IPR015902 Pfam:PF00128 Pfam:PF02806
Pfam:PF02922 PIRSF:PIRSF000463 UniPathway:UPA00164
InterPro:IPR013780 GO:GO:0005737 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0043169 Gene3D:3.20.20.80
InterPro:IPR017853 SUPFAM:SSF51445 CAZy:GH13 Gene3D:2.60.40.1180
PANTHER:PTHR10357 GO:GO:0004553 EMBL:BN001307 CAZy:CBM48
GO:GO:0005978 InterPro:IPR014756 SUPFAM:SSF81296 EMBL:AACD01000038
GO:GO:0003844 eggNOG:COG0296 HOGENOM:HOG000175159 KO:K00700
OMA:EIDPYLK EMBL:AB026630 RefSeq:XP_659918.1
ProteinModelPortal:Q9Y8H3 STRING:Q9Y8H3 GeneID:2875628
KEGG:ani:AN2314.2 OrthoDB:EOG47M562 Uniprot:Q9Y8H3
Length = 684
Score = 621 (223.7 bits), Expect = 1.2e-60, P = 1.2e-60
Identities = 118/173 (68%), Positives = 132/173 (76%)
Query: 44 FGTPEQLKYLVDECHKAGLYVLLDVVHSHASKNVLDGLNEFDGTQACFFHDGPRGTHPLW 103
+G PE LK LVD H GL VLLDVVHSHASKNV DGLN FDG+ +FH G +G H LW
Sbjct: 246 YGKPEDLKELVDTAHSMGLVVLLDVVHSHASKNVDDGLNMFDGSDHLYFHSGSKGQHELW 305
Query: 104 DSRLFNYSEIEVLRFLLSNLRWYLEEYQFDGFRFDGVTSMLYHNHGCGEGFSGHYDEYFG 163
DSRLFNY EVLRFLLSNLR+++EEY FDGFRFDGVTSMLY +HG G GFSG Y EYFG
Sbjct: 306 DSRLFNYGNHEVLRFLLSNLRFWMEEYGFDGFRFDGVTSMLYTHHGIGTGFSGGYHEYFG 365
Query: 164 LNVDTDALIYLMVANKFLHDKYPEIITIAEDVSGMPASCRPVTEGGTGFDYRL 216
VD D ++YL +AN+ LH YP+ IT+AEDVSGMPA C P GG GFDYRL
Sbjct: 366 PAVDDDGVMYLALANEMLHRLYPDCITVAEDVSGMPALCLPHGLGGVGFDYRL 418
>DICTYBASE|DDB_G0274105 [details] [associations]
symbol:glgB "branching enzyme" species:44689
"Dictyostelium discoideum" [GO:0043169 "cation binding"
evidence=IEA] [GO:0005978 "glycogen biosynthetic process"
evidence=IEA;ISS] [GO:0005975 "carbohydrate metabolic process"
evidence=IEA] [GO:0004553 "hydrolase activity, hydrolyzing
O-glycosyl compounds" evidence=IEA] [GO:0003844 "1,4-alpha-glucan
branching enzyme activity" evidence=IEA;ISS] [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0006091 "generation of precursor metabolites and
energy" evidence=ISS] [GO:0005977 "glycogen metabolic process"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0016757
"transferase activity, transferring glycosyl groups" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR004193
InterPro:IPR006047 InterPro:IPR006048 InterPro:IPR006407
InterPro:IPR013781 InterPro:IPR015902 Pfam:PF00128 Pfam:PF02806
Pfam:PF02922 PIRSF:PIRSF000463 UniPathway:UPA00164
InterPro:IPR013780 dictyBase:DDB_G0274105 GO:GO:0005737
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0043169
Gene3D:3.20.20.80 InterPro:IPR017853 SUPFAM:SSF51445 CAZy:GH13
Gene3D:2.60.40.1180 PANTHER:PTHR10357 GO:GO:0004553
GenomeReviews:CM000151_GR CAZy:CBM48 GO:GO:0005978
EMBL:AAFI02000012 InterPro:IPR014756 SUPFAM:SSF81296 GO:GO:0003844
HSSP:P07762 eggNOG:COG0296 KO:K00700 RefSeq:XP_644004.1
ProteinModelPortal:Q555Q9 STRING:Q555Q9 EnsemblProtists:DDB0214943
GeneID:8619432 KEGG:ddi:DDB_G0274105 OMA:EIDPYLK
ProtClustDB:CLSZ2431015 Uniprot:Q555Q9
Length = 678
Score = 591 (213.1 bits), Expect = 1.7e-57, P = 1.7e-57
Identities = 113/180 (62%), Positives = 133/180 (73%)
Query: 44 FGTPEQLKYLVDECHKAGLYVLLDVVHSHASKNVLDGLNEFDGTQACFFHDGPRGTHPLW 103
FGTPE+LK ++D+ H+ GL V LDVVHSHASKNVLDGLN+ DGT +FH G RG H LW
Sbjct: 244 FGTPEELKEMIDKAHEMGLLVFLDVVHSHASKNVLDGLNQLDGTDHHYFHSGGRGNHELW 303
Query: 104 DSRLFNYSEIEVLRFLLSNLRWYLEEYQFDGFRFDGVTSMLYHNHGCGEGFSGHYDEYFG 163
DSRLFNY EV+RFLLSNLR+Y++EY FDGFRFDGVTSM+Y +HG S YD+YFG
Sbjct: 304 DSRLFNYGNWEVMRFLLSNLRFYVDEYHFDGFRFDGVTSMIYTHHGLSPACS--YDDYFG 361
Query: 164 LNVDTDALIYLMVANKFLHDKYPEIITIAEDVSGMPASCRPVTEGGTGFDYRLGRPGLDK 223
VD DAL YL +AN LH P I+TIAE+V+G+ CRP +EGG FDYRL DK
Sbjct: 362 GAVDEDALNYLTLANVMLHTLNPSIVTIAEEVTGLATLCRPFSEGGGDFDYRLAMGIPDK 421
>CGD|CAL0000583 [details] [associations]
symbol:GLC3 species:5476 "Candida albicans" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005978 "glycogen biosynthetic
process" evidence=IEA] [GO:0003844 "1,4-alpha-glucan branching
enzyme activity" evidence=IEA] InterPro:IPR004193
InterPro:IPR006047 InterPro:IPR006048 InterPro:IPR006407
InterPro:IPR013781 InterPro:IPR015902 Pfam:PF00128 Pfam:PF02806
Pfam:PF02922 PIRSF:PIRSF000463 InterPro:IPR013780 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0043169 Gene3D:3.20.20.80
InterPro:IPR017853 SUPFAM:SSF51445 Gene3D:2.60.40.1180
PANTHER:PTHR10357 GO:GO:0004553 GO:GO:0005978 InterPro:IPR014756
SUPFAM:SSF81296 EMBL:AACQ01000033 GO:GO:0003844
HOGENOM:HOG000175159 KO:K00700 RefSeq:XP_719298.1
ProteinModelPortal:Q5AC50 STRING:Q5AC50 GeneID:3639129
KEGG:cal:CaO19.13067 CGD:CAL0070583 Uniprot:Q5AC50
Length = 676
Score = 578 (208.5 bits), Expect = 4.2e-56, P = 4.2e-56
Identities = 106/177 (59%), Positives = 136/177 (76%)
Query: 44 FGTPEQLKYLVDECHKAGLYVLLDVVHSHASKNVLDGLNEFDGTQACFFHDGPRGTHPLW 103
+GTP++LK L+D H G+ VLLDVVHSH+SKNV DGLN F+GT FH G RG H LW
Sbjct: 241 YGTPDELKELIDTAHGMGIQVLLDVVHSHSSKNVDDGLNMFNGTDHYLFHGGSRGNHDLW 300
Query: 104 DSRLFNYSEIEVLRFLLSNLRWYLEEYQFDGFRFDGVTSMLYHNHGCGEGFSGHYDEYFG 163
DSRLFNY+ E LRFLLSNL++Y++ +QFDGFRFDGVTSMLY +HG GFSG Y EYFG
Sbjct: 301 DSRLFNYTNYETLRFLLSNLKYYIDVFQFDGFRFDGVTSMLYKHHGLSVGFSGGYHEYFG 360
Query: 164 LNVDTDALIYLMVANKFLHD----KYPEIITIAEDVSGMPASCRPVTEGGTGFDYRL 216
VD +A++YLM+A++ +++ + + +IAEDVSGMP CRP+++GG GF+YRL
Sbjct: 361 DGVDNEAIVYLMLAHQLMNEISTTQNFNLTSIAEDVSGMPTLCRPISDGGIGFNYRL 417
>SGD|S000000737 [details] [associations]
symbol:GLC3 "Glycogen branching enzyme, involved in glycogen
accumulation" species:4932 "Saccharomyces cerevisiae" [GO:0005978
"glycogen biosynthetic process" evidence=IEA;IMP] [GO:0043169
"cation binding" evidence=IEA] [GO:0003844 "1,4-alpha-glucan
branching enzyme activity" evidence=IEA;IGI;IMP] [GO:0004553
"hydrolase activity, hydrolyzing O-glycosyl compounds"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0016757 "transferase activity, transferring glycosyl groups"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0005975 "carbohydrate
metabolic process" evidence=IEA] InterPro:IPR004193
InterPro:IPR006047 InterPro:IPR006048 InterPro:IPR006407
InterPro:IPR013781 InterPro:IPR015902 Pfam:PF00128 Pfam:PF02806
Pfam:PF02922 PIRSF:PIRSF000463 UniPathway:UPA00164 SGD:S000000737
InterPro:IPR013780 GO:GO:0005737 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0043169 Gene3D:3.20.20.80
InterPro:IPR017853 SUPFAM:SSF51445 CAZy:GH13 Gene3D:2.60.40.1180
PANTHER:PTHR10357 GO:GO:0004553 CAZy:CBM48 GO:GO:0005978
EMBL:BK006939 InterPro:IPR014756 SUPFAM:SSF81296 EMBL:U18530
GO:GO:0003844 eggNOG:COG0296 HOGENOM:HOG000175159 KO:K00700
OrthoDB:EOG47M562 GeneTree:ENSGT00390000017040 EMBL:M76739
PIR:S50448 RefSeq:NP_010905.1 ProteinModelPortal:P32775 SMR:P32775
DIP:DIP-3873N IntAct:P32775 MINT:MINT-573503 STRING:P32775
PaxDb:P32775 PeptideAtlas:P32775 EnsemblFungi:YEL011W GeneID:856705
KEGG:sce:YEL011W CYGD:YEL011w OMA:ALYWFKE NextBio:982774
Genevestigator:P32775 GermOnline:YEL011W Uniprot:P32775
Length = 704
Score = 568 (205.0 bits), Expect = 4.8e-55, P = 4.8e-55
Identities = 112/181 (61%), Positives = 133/181 (73%)
Query: 44 FGTPEQLKYLVDECHKAGLYVLLDVVHSHASKNVLDGLNEFDGTQACFFHD--GPRGTHP 101
FGTPE+LK L+D H G+ VLLDVVHSHASKNV DGLN FDG+ +FH RG HP
Sbjct: 260 FGTPEELKELIDTAHSMGILVLLDVVHSHASKNVEDGLNMFDGSDHQYFHSISSGRGEHP 319
Query: 102 LWDSRLFNYSEIEVLRFLLSNLRWYLEEYQFDGFRFDGVTSMLYHNHGCGEG--FSGHYD 159
LWDSRLFNY + EV RFLL+NL +Y++ YQFDGFRFDGVTSMLY +HG G G FSG Y+
Sbjct: 320 LWDSRLFNYGKFEVQRFLLANLAFYVDVYQFDGFRFDGVTSMLYVHHGVGAGGSFSGDYN 379
Query: 160 EYFGLN---VDTDALIYLMVANKFLHDKYPEI-ITIAEDVSGMPASCRPVTEGGTGFDYR 215
EY + VD +AL YLM+AN +H+ P + +T+AEDVSG P C P + GGTGFDYR
Sbjct: 380 EYLSRDRSFVDHEALAYLMLANDLVHEMLPNLAVTVAEDVSGYPTLCLPRSIGGTGFDYR 439
Query: 216 L 216
L
Sbjct: 440 L 440
>UNIPROTKB|F1SK65 [details] [associations]
symbol:F1SK65 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043169 "cation binding" evidence=IEA] [GO:0005975
"carbohydrate metabolic process" evidence=IEA] [GO:0004553
"hydrolase activity, hydrolyzing O-glycosyl compounds"
evidence=IEA] InterPro:IPR004193 InterPro:IPR006047
InterPro:IPR013781 InterPro:IPR015902 Pfam:PF00128 Pfam:PF02922
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0043169
Gene3D:3.20.20.80 InterPro:IPR017853 SUPFAM:SSF51445 GO:GO:0005975
PANTHER:PTHR10357 GO:GO:0004553 GeneTree:ENSGT00390000017040
EMBL:CU466470 Ensembl:ENSSSCT00000013131 OMA:ALEWAPA
ArrayExpress:F1SK65 Uniprot:F1SK65
Length = 319
Score = 492 (178.3 bits), Expect = 5.4e-47, P = 5.4e-47
Identities = 88/120 (73%), Positives = 101/120 (84%)
Query: 44 FGTPEQLKYLVDECHKAGLYVLLDVVHSHASKNVLDGLNEFDGTQACFFHDGPRGTHPLW 103
+GTPE+LK LVD H G+ VLLD+VHSHASKN DGLN FDGT++C+FH GPRG H LW
Sbjct: 198 YGTPEELKELVDTAHSMGITVLLDLVHSHASKNSEDGLNMFDGTESCYFHYGPRGNHNLW 257
Query: 104 DSRLFNYSEIEVLRFLLSNLRWYLEEYQFDGFRFDGVTSMLYHNHGCGEGFSGHYDEYFG 163
DSRLF+YS EVLRFLLSN+RW+LEEY FDGFRFDGVTSMLY++HG G+ FSG Y EYFG
Sbjct: 258 DSRLFDYSSWEVLRFLLSNIRWWLEEYGFDGFRFDGVTSMLYYHHGIGQSFSGDYHEYFG 317
>TAIR|locus:2092349 [details] [associations]
symbol:EMB2729 "EMBRYO DEFECTIVE 2729" species:3702
"Arabidopsis thaliana" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0004556 "alpha-amylase activity" evidence=ISS]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA;ISS;IMP]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=NAS] [GO:0043169
"cation binding" evidence=IEA] [GO:0009536 "plastid" evidence=IDA]
[GO:0009791 "post-embryonic development" evidence=IMP]
InterPro:IPR006047 InterPro:IPR006048 InterPro:IPR013781
InterPro:IPR015902 Pfam:PF00128 Pfam:PF02806 UniPathway:UPA00152
InterPro:IPR013780 GO:GO:0009507 GO:GO:0009570 EMBL:CP002686
GenomeReviews:BA000014_GR Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0043169 Gene3D:3.20.20.80 InterPro:IPR017853 SUPFAM:SSF51445
CAZy:GH13 GO:GO:0005975 Gene3D:2.60.40.1180 PANTHER:PTHR10357
CAZy:CBM48 GO:GO:0009791 GO:GO:0003844 EMBL:AB024036 GO:GO:0009501
eggNOG:COG0296 HOGENOM:HOG000175159 GO:GO:0019252 EMBL:GQ374452
EMBL:AK118785 IPI:IPI00545170 IPI:IPI00657194 IPI:IPI00991739
RefSeq:NP_001154629.1 RefSeq:NP_001189940.1 RefSeq:NP_188679.2
UniGene:At.38239 ProteinModelPortal:D2WL32 SMR:D2WL32 PRIDE:D2WL32
EnsemblPlants:AT3G20440.2 GeneID:821589 KEGG:ath:AT3G20440
TAIR:At3g20440 InParanoid:Q8GWK4 OMA:RSISKRI ProtClustDB:PLN03244
Uniprot:D2WL32
Length = 899
Score = 473 (171.6 bits), Expect = 4.3e-44, P = 4.3e-44
Identities = 90/197 (45%), Positives = 124/197 (62%)
Query: 24 LFGTPEQLKYLVDECHKAGLF------GTPEQLKYLVDECHKAGLYVLLDVVHSHASKNV 77
L G PE Y F GTP+ K LVDE H GL V LD+VHS+A+ +
Sbjct: 438 LIGVPEHKDYFTVGYRVTNFFAASSRYGTPDDFKRLVDEAHGLGLLVFLDIVHSYAAADQ 497
Query: 78 LDGLNEFDGTQACFFHDGPRGTHPLWDSRLFNYSEIEVLRFLLSNLRWYLEEYQFDGFRF 137
+ GL+ FDG+ C+FH G RG H W +R+F Y +++VL FL+SNL W++ EYQ DG++F
Sbjct: 498 MVGLSLFDGSNDCYFHYGKRGHHKHWGTRMFKYGDLDVLHFLISNLNWWITEYQVDGYQF 557
Query: 138 DGVTSMLYHNHGCGEGFSGHYDEYFGLNVDTDALIYLMVANKFLHDKYPEIITIAEDVSG 197
+ SM+Y ++G F+ D+Y VD DAL+YL++AN+ LH ++P IITIAED +
Sbjct: 558 HSLASMIYTHNGFAS-FNNDLDDYCNQYVDRDALMYLILANEILHVQHPNIITIAEDATY 616
Query: 198 MPASCRPVTEGGTGFDY 214
P C PV++GG GFDY
Sbjct: 617 YPGLCEPVSQGGLGFDY 633
>UNIPROTKB|F1LYQ5 [details] [associations]
symbol:F1LYQ5 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0043169 "cation binding" evidence=IEA] InterPro:IPR006047
InterPro:IPR006048 InterPro:IPR013781 InterPro:IPR015902
Pfam:PF00128 Pfam:PF02806 InterPro:IPR013780 GO:GO:0003824
GO:GO:0043169 Gene3D:3.20.20.80 InterPro:IPR017853 SUPFAM:SSF51445
GO:GO:0005975 Gene3D:2.60.40.1180 PANTHER:PTHR10357 IPI:IPI00363180
PRIDE:F1LYQ5 Ensembl:ENSRNOT00000045276 Uniprot:F1LYQ5
Length = 537
Score = 360 (131.8 bits), Expect = 7.7e-33, P = 7.7e-33
Identities = 82/175 (46%), Positives = 103/175 (58%)
Query: 44 FGTPEQLKYLVDECHKAGLYVLLDVVHSHASKNVLDGLNEFDGTQACFFHDGPRGTHPLW 103
+GTPE+LK LVD H G+ VLLDVVHSHASKN DGLN FDGT +C+FH GPRGTH LW
Sbjct: 97 YGTPEELKELVDTAHLMGIVVLLDVVHSHASKNSEDGLNMFDGTDSCYFHSGPRGTHDLW 156
Query: 104 DSRLFNYSEIEVLRF-LLSNLR-WYLEEYQFDGFRFDGVTSMLYHNHGCGEGFSGHYDEY 161
DSRLF YS + +RF LLS WY E+ D G+ + H G + FS + +
Sbjct: 157 DSRLFIYSRSDSVRFRLLSACTAWY-PEFCLDLVAAYGLDPQVLHYGGLVKIFSKSFGCH 215
Query: 162 FGLNVDTDALIYLMVANKFLHDKYPEIITIAEDVSGMPASCRPVTEGGTGFDYRL 216
F L + L+Y M H + IT+ DVS +PA+C + G +G RL
Sbjct: 216 FFLKTVSFLLVYAMPGVHMCHGMCGDQITVVSDVS-LPATCDTMAVGLSGSKLRL 269
>TIGR_CMR|SO_1494 [details] [associations]
symbol:SO_1494 "1,4-alpha-glucan branching enzyme"
species:211586 "Shewanella oneidensis MR-1" [GO:0003844
"1,4-alpha-glucan branching enzyme activity" evidence=ISS]
[GO:0005978 "glycogen biosynthetic process" evidence=ISS]
HAMAP:MF_00685 InterPro:IPR004193 InterPro:IPR006047
InterPro:IPR006048 InterPro:IPR006407 InterPro:IPR013781
InterPro:IPR015902 Pfam:PF00128 Pfam:PF02806 Pfam:PF02922
PIRSF:PIRSF000463 UniPathway:UPA00164 InterPro:IPR013780
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0043169
Gene3D:3.20.20.80 InterPro:IPR017853 SUPFAM:SSF51445
Gene3D:2.60.40.1180 PANTHER:PTHR10357 GO:GO:0004553 GO:GO:0005978
EMBL:AE014299 GenomeReviews:AE014299_GR InterPro:IPR014756
SUPFAM:SSF81296 GO:GO:0003844 eggNOG:COG0296 KO:K00700
HOGENOM:HOG000283037 ProtClustDB:PRK05402 PANTHER:PTHR10357:SF13
TIGRFAMs:TIGR01515 OMA:YNLGRTE RefSeq:NP_717111.2
ProteinModelPortal:Q8EGU7 PRIDE:Q8EGU7 GeneID:1169305
KEGG:son:SO_1494 PATRIC:23522632 Uniprot:Q8EGU7
Length = 746
Score = 281 (104.0 bits), Expect = 2.0e-25, Sum P(2) = 2.0e-25
Identities = 65/174 (37%), Positives = 94/174 (54%)
Query: 44 FGTPEQLKYLVDECHKAGLYVLLDVVHSHASKNVLDGLNEFDGTQACFF-HDGPR-GTHP 101
FG K +D CH+A + VLLD V +H K+ GL FDGT C + H+ PR GTHP
Sbjct: 323 FGDANGFKAFIDACHQAEIGVLLDWVAAHFPKDP-HGLVRFDGT--CLYEHEDPRKGTHP 379
Query: 102 LWDSRLFNYSEIEVLRFLLSNLRWYLEEYQFDGFRFDGVTSMLYHNHGCGEGFSGHYDEY 161
WD+ ++NY EV FLLSN ++L E+ DG R D V+SMLY ++ G
Sbjct: 380 DWDTLIYNYGRGEVRSFLLSNACYWLREFHLDGLRLDAVSSMLYLDYSREPG--QWLPNA 437
Query: 162 FGLNVDTDALIYLMVANKFLHDKYPEIITIAEDVSGMPASCRPVTEGGTGFDYR 215
+G + +A+ +L + N+ L+ P I IAE+ + +P G GF ++
Sbjct: 438 YGGRENLEAIDFLQMLNQRLYQAIPGICMIAEESTAFAGVTKPTDSSGLGFGFK 491
Score = 42 (19.8 bits), Expect = 2.0e-25, Sum P(2) = 2.0e-25
Identities = 8/20 (40%), Positives = 10/20 (50%)
Query: 3 TNGFGTPEQLKYLVDECHKA 22
T FG K +D CH+A
Sbjct: 320 TYRFGDANGFKAFIDACHQA 339
>UNIPROTKB|P07762 [details] [associations]
symbol:glgB species:83333 "Escherichia coli K-12"
[GO:0006974 "response to DNA damage stimulus" evidence=IEP]
[GO:0043169 "cation binding" evidence=IEA] [GO:0004553 "hydrolase
activity, hydrolyzing O-glycosyl compounds" evidence=IEA]
[GO:0003844 "1,4-alpha-glucan branching enzyme activity"
evidence=IEA;IDA] [GO:0005978 "glycogen biosynthetic process"
evidence=IEA;IMP] HAMAP:MF_00685 InterPro:IPR004193
InterPro:IPR006047 InterPro:IPR006048 InterPro:IPR006407
InterPro:IPR013781 InterPro:IPR015902 Pfam:PF00128 Pfam:PF02806
Pfam:PF02922 PIRSF:PIRSF000463 UniPathway:UPA00164
InterPro:IPR013780 Gene3D:2.60.40.10 InterPro:IPR013783 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
GO:GO:0043169 Gene3D:3.20.20.80 InterPro:IPR017853 SUPFAM:SSF51445
CAZy:GH13 Gene3D:2.60.40.1180 PANTHER:PTHR10357 GO:GO:0004553
EMBL:U18997 CAZy:CBM48 GO:GO:0005978 GO:GO:0006974
InterPro:IPR014756 SUPFAM:SSF81296 GO:GO:0003844 eggNOG:COG0296
KO:K00700 HOGENOM:HOG000283037 ProtClustDB:PRK05402
PANTHER:PTHR10357:SF13 TIGRFAMs:TIGR01515 EMBL:M13751 PIR:A25498
RefSeq:NP_417890.1 RefSeq:YP_492001.1 PDB:1GTY PDB:1M7X PDB:3O7Y
PDB:3O7Z PDBsum:1GTY PDBsum:1M7X PDBsum:3O7Y PDBsum:3O7Z
ProteinModelPortal:P07762 SMR:P07762 IntAct:P07762 PRIDE:P07762
EnsemblBacteria:EBESCT00000004077 EnsemblBacteria:EBESCT00000015971
GeneID:12933509 GeneID:947940 KEGG:ecj:Y75_p3745 KEGG:eco:b3432
PATRIC:32122304 EchoBASE:EB0373 EcoGene:EG10378 OMA:YNLGRTE
BioCyc:EcoCyc:GLYCOGEN-BRANCH-MONOMER
BioCyc:ECOL316407:JW3395-MONOMER
BioCyc:MetaCyc:GLYCOGEN-BRANCH-MONOMER EvolutionaryTrace:P07762
Genevestigator:P07762 Uniprot:P07762
Length = 728
Score = 264 (98.0 bits), Expect = 8.7e-22, P = 8.7e-22
Identities = 60/173 (34%), Positives = 90/173 (52%)
Query: 44 FGTPEQLKYLVDECHKAGLYVLLDVVHSHASKNVLDGLNEFDGTQACFFHDGPR-GTHPL 102
FGT + +Y +D H AGL V+LD V H + L EFDGT + H PR G H
Sbjct: 312 FGTRDDFRYFIDAAHAAGLNVILDWVPGHFPTDDF-ALAEFDGTNL-YEHSDPREGYHQD 369
Query: 103 WDSRLFNYSEIEVLRFLLSNLRWYLEEYQFDGFRFDGVTSMLYHNHGCGEGFSGHYDEYF 162
W++ ++NY EV FL+ N +++E + D R D V SM+Y ++ EG F
Sbjct: 370 WNTLIYNYGRREVSNFLVGNALYWIERFGIDALRVDAVASMIYRDYSRKEG--EWIPNEF 427
Query: 163 GLNVDTDALIYLMVANKFLHDKYPEIITIAEDVSGMPASCRPVTEGGTGFDYR 215
G + +A+ +L N+ L ++ +T+AE+ + P RP GG GF Y+
Sbjct: 428 GGRENLEAIEFLRNTNRILGEQVSGAVTMAEESTDFPGVSRPQDMGGLGFWYK 480
>UNIPROTKB|Q10625 [details] [associations]
symbol:glgB "1,4-alpha-glucan branching enzyme GlgB"
species:1773 "Mycobacterium tuberculosis" [GO:0003844
"1,4-alpha-glucan branching enzyme activity" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0005978 "glycogen biosynthetic process"
evidence=IMP] [GO:0009250 "glucan biosynthetic process"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] HAMAP:MF_00685
InterPro:IPR004193 InterPro:IPR006047 InterPro:IPR006048
InterPro:IPR006407 InterPro:IPR013781 InterPro:IPR015902
Pfam:PF00128 Pfam:PF02806 Pfam:PF02922 PIRSF:PIRSF000463
UniPathway:UPA00164 UniPathway:UPA00934 InterPro:IPR013780
GO:GO:0005886 GO:GO:0040007 Gene3D:2.60.40.10 InterPro:IPR013783
EMBL:AE000516 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
GO:GO:0043169 Gene3D:3.20.20.80 InterPro:IPR017853 SUPFAM:SSF51445
CAZy:GH13 Gene3D:2.60.40.1180 PANTHER:PTHR10357 GO:GO:0004553
EMBL:BX842576 CAZy:CBM48 GO:GO:0005978 InterPro:IPR014756
SUPFAM:SSF81296 GO:GO:0045227 GO:GO:0003844 BRENDA:2.4.1.18
eggNOG:COG0296 KO:K00700 HOGENOM:HOG000283037 OMA:YSREDGQ
ProtClustDB:PRK05402 PANTHER:PTHR10357:SF13 TIGRFAMs:TIGR01515
PIR:B70770 RefSeq:NP_215842.1 RefSeq:NP_335818.1
RefSeq:YP_006514704.1 PDB:3K1D PDBsum:3K1D
ProteinModelPortal:Q10625 SMR:Q10625 PRIDE:Q10625
EnsemblBacteria:EBMYCT00000003773 EnsemblBacteria:EBMYCT00000071870
GeneID:13319912 GeneID:886893 GeneID:924686 KEGG:mtc:MT1368
KEGG:mtu:Rv1326c KEGG:mtv:RVBD_1326c PATRIC:18124782
TubercuList:Rv1326c EvolutionaryTrace:Q10625 Uniprot:Q10625
Length = 731
Score = 260 (96.6 bits), Expect = 2.3e-21, P = 2.3e-21
Identities = 61/172 (35%), Positives = 89/172 (51%)
Query: 44 FGTPEQLKYLVDECHKAGLYVLLDVVHSHASKNVLDGLNEFDGTQACFFHDGPRGTHPLW 103
FGTP+ + LVD H+AG+ V++D V +H K+ L FDGT D RG W
Sbjct: 318 FGTPDDFRALVDALHQAGIGVIVDWVPAHFPKDAW-ALGRFDGTPLYEHSDPKRGEQLDW 376
Query: 104 DSRLFNYSEIEVLRFLLSNLRWYLEEYQFDGFRFDGVTSMLYHNHGCGEGFSGHYDEYFG 163
+ +F++ EV FL++N ++L+E+ DG R D V SMLY ++ EG G G
Sbjct: 377 GTYVFDFGRPEVRNFLVANALYWLQEFHIDGLRVDAVASMLYLDYSRPEG--GWTPNVHG 434
Query: 164 LNVDTDALIYLMVANKFLHDKYPEIITIAEDVSGMPASCRPVTEGGTGFDYR 215
+ +A+ +L N H P I+TIAE+ + RP GG GF +
Sbjct: 435 GRENLEAVQFLQEMNATAHKVAPGIVTIAEESTPWSGVTRPTNIGGLGFSMK 486
>UNIPROTKB|Q9KNE8 [details] [associations]
symbol:glgB "1,4-alpha-glucan branching enzyme GlgB"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0003844 "1,4-alpha-glucan branching enzyme activity"
evidence=ISS] [GO:0005978 "glycogen biosynthetic process"
evidence=ISS] HAMAP:MF_00685 InterPro:IPR004193 InterPro:IPR006047
InterPro:IPR006048 InterPro:IPR006407 InterPro:IPR013781
InterPro:IPR015902 Pfam:PF00128 Pfam:PF02806 Pfam:PF02922
PIRSF:PIRSF000463 UniPathway:UPA00164 InterPro:IPR013780
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0043169
Gene3D:3.20.20.80 InterPro:IPR017853 SUPFAM:SSF51445 CAZy:GH13
Gene3D:2.60.40.1180 PANTHER:PTHR10357 GO:GO:0004553 CAZy:CBM48
GO:GO:0005978 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014756 SUPFAM:SSF81296 GO:GO:0003844 eggNOG:COG0296
KO:K00700 ProtClustDB:PRK05402 PANTHER:PTHR10357:SF13
TIGRFAMs:TIGR01515 OMA:YNLGRTE PIR:D82511 RefSeq:NP_232417.1
ProteinModelPortal:Q9KNE8 DNASU:2612506 GeneID:2612506
KEGG:vch:VCA0016 PATRIC:20084623 Uniprot:Q9KNE8
Length = 666
Score = 259 (96.2 bits), Expect = 2.5e-21, P = 2.5e-21
Identities = 64/179 (35%), Positives = 96/179 (53%)
Query: 44 FGTPEQLKYLVDECHKAGLYVLLDVVHSHASKNVLDGLNEFDGTQACFFHD-GPR-GTHP 101
+G+P+ KY VD CH+AG+ V+LD V +H + GL FDGT FHD PR G H
Sbjct: 252 YGSPDDFKYFVDLCHQAGIGVVLDWVPAHFPSDS-HGLANFDGTP--LFHDPDPRRGWHQ 308
Query: 102 LWDSRLFNYSEIEVLRFLLSNLRWYLEEYQFDGFRFDGVTSMLYHNHGCGEGFSGHYDEY 161
W+S +++ V RFL++N ++ E + DG R D V SMLY + +S +D++
Sbjct: 309 DWNSYIYDLGREHVRRFLVANALYWFEMFHIDGIRVDAVASMLYLD------YSRSHDQW 362
Query: 162 FGLNVDT-----DALIYLMVANKFLHDKYPEIITIAEDVSGMPASCRPVTEGGTGFDYR 215
NVD DA+ N+ ++ +P +TIAE+ + P P GG GF ++
Sbjct: 363 IP-NVDGGRENYDAIATFKWMNEEVYKHFPNAMTIAEESTAFPGVSAPTFMGGLGFGFK 420
>TIGR_CMR|VC_A0016 [details] [associations]
symbol:VC_A0016 "1,4-alpha-glucan branching enzyme"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0003844
"1,4-alpha-glucan branching enzyme activity" evidence=ISS]
[GO:0005978 "glycogen biosynthetic process" evidence=ISS]
HAMAP:MF_00685 InterPro:IPR004193 InterPro:IPR006047
InterPro:IPR006048 InterPro:IPR006407 InterPro:IPR013781
InterPro:IPR015902 Pfam:PF00128 Pfam:PF02806 Pfam:PF02922
PIRSF:PIRSF000463 UniPathway:UPA00164 InterPro:IPR013780
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0043169
Gene3D:3.20.20.80 InterPro:IPR017853 SUPFAM:SSF51445 CAZy:GH13
Gene3D:2.60.40.1180 PANTHER:PTHR10357 GO:GO:0004553 CAZy:CBM48
GO:GO:0005978 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014756 SUPFAM:SSF81296 GO:GO:0003844 eggNOG:COG0296
KO:K00700 ProtClustDB:PRK05402 PANTHER:PTHR10357:SF13
TIGRFAMs:TIGR01515 OMA:YNLGRTE PIR:D82511 RefSeq:NP_232417.1
ProteinModelPortal:Q9KNE8 DNASU:2612506 GeneID:2612506
KEGG:vch:VCA0016 PATRIC:20084623 Uniprot:Q9KNE8
Length = 666
Score = 259 (96.2 bits), Expect = 2.5e-21, P = 2.5e-21
Identities = 64/179 (35%), Positives = 96/179 (53%)
Query: 44 FGTPEQLKYLVDECHKAGLYVLLDVVHSHASKNVLDGLNEFDGTQACFFHD-GPR-GTHP 101
+G+P+ KY VD CH+AG+ V+LD V +H + GL FDGT FHD PR G H
Sbjct: 252 YGSPDDFKYFVDLCHQAGIGVVLDWVPAHFPSDS-HGLANFDGTP--LFHDPDPRRGWHQ 308
Query: 102 LWDSRLFNYSEIEVLRFLLSNLRWYLEEYQFDGFRFDGVTSMLYHNHGCGEGFSGHYDEY 161
W+S +++ V RFL++N ++ E + DG R D V SMLY + +S +D++
Sbjct: 309 DWNSYIYDLGREHVRRFLVANALYWFEMFHIDGIRVDAVASMLYLD------YSRSHDQW 362
Query: 162 FGLNVDT-----DALIYLMVANKFLHDKYPEIITIAEDVSGMPASCRPVTEGGTGFDYR 215
NVD DA+ N+ ++ +P +TIAE+ + P P GG GF ++
Sbjct: 363 IP-NVDGGRENYDAIATFKWMNEEVYKHFPNAMTIAEESTAFPGVSAPTFMGGLGFGFK 420
>TIGR_CMR|BA_5123 [details] [associations]
symbol:BA_5123 "1,4-alpha-glucan branching enzyme"
species:198094 "Bacillus anthracis str. Ames" [GO:0003844
"1,4-alpha-glucan branching enzyme activity" evidence=ISS]
[GO:0005978 "glycogen biosynthetic process" evidence=ISS]
HAMAP:MF_00685 InterPro:IPR004193 InterPro:IPR006047
InterPro:IPR006048 InterPro:IPR006407 InterPro:IPR013781
InterPro:IPR015902 Pfam:PF00128 Pfam:PF02806 Pfam:PF02922
PIRSF:PIRSF000463 UniPathway:UPA00164 InterPro:IPR013780
Gene3D:2.60.40.10 InterPro:IPR013783 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0043169 Gene3D:3.20.20.80
InterPro:IPR017853 SUPFAM:SSF51445 CAZy:GH13 Gene3D:2.60.40.1180
PANTHER:PTHR10357 GO:GO:0004553 CAZy:CBM48 GO:GO:0005978
GO:GO:0003844 eggNOG:COG0296 KO:K00700 RefSeq:NP_847309.1
RefSeq:YP_021776.2 RefSeq:YP_031005.1 ProteinModelPortal:Q81K82
IntAct:Q81K82 DNASU:1084438 EnsemblBacteria:EBBACT00000011004
EnsemblBacteria:EBBACT00000018572 EnsemblBacteria:EBBACT00000022867
GeneID:1084438 GeneID:2819765 GeneID:2850585 KEGG:ban:BA_5123
KEGG:bar:GBAA_5123 KEGG:bat:BAS4761 HOGENOM:HOG000283037
OMA:YSREDGQ ProtClustDB:PRK05402
BioCyc:BANT260799:GJAJ-4815-MONOMER
BioCyc:BANT261594:GJ7F-4975-MONOMER PANTHER:PTHR10357:SF13
TIGRFAMs:TIGR01515 Uniprot:Q81K82
Length = 645
Score = 244 (91.0 bits), Expect = 9.7e-20, P = 9.7e-20
Identities = 60/172 (34%), Positives = 87/172 (50%)
Query: 44 FGTPEQLKYLVDECHKAGLYVLLDVVHSHASKNVLDGLNEFDGTQACFFHDGPRGTHPLW 103
FGTP L + VDECHK G+ V+LD V H K+ GL FDGT + D +P+W
Sbjct: 216 FGTPHDLMHFVDECHKYGIGVILDWVPGHFCKDA-HGLYLFDGTPTYEYKDKDVQENPVW 274
Query: 104 DSRLFNYSEIEVLRFLLSNLRWYLEEYQFDGFRFDGVTSMLYHNHGCGEGFSGHYDEYFG 163
+ F+ + EV FL+SN +++ + DGFR D V +MLY N E + H
Sbjct: 275 GTVNFDLGKREVRNFLISNALFWMRYFHIDGFRVDAVANMLYWNKEGQEQSNEH------ 328
Query: 164 LNVDTDALIYLMVANKFLHDKYPEIITIAEDVSGMPASCRPVTEGGTGFDYR 215
A+ +L N+ + + + + AED + P P EGG GF+Y+
Sbjct: 329 ------AVSFLRELNEAVFAEDEDFLMTAEDSTAWPLVTAPTYEGGLGFNYK 374
>UNIPROTKB|Q9KKS1 [details] [associations]
symbol:VC_A1029 "Glycogen operon protein GlgX"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005977 "glycogen
metabolic process" evidence=ISS] InterPro:IPR004193
InterPro:IPR006047 InterPro:IPR011837 InterPro:IPR013781
InterPro:IPR015902 Pfam:PF00128 Pfam:PF02922 InterPro:IPR013780
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0043169
Gene3D:3.20.20.80 InterPro:IPR017853 SUPFAM:SSF51445 CAZy:GH13
Gene3D:2.60.40.1180 PANTHER:PTHR10357 GO:GO:0004553 CAZy:CBM48
GO:GO:0005977 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014756 SUPFAM:SSF81296 GO:GO:0005980 HSSP:P07762
KO:K02438 PANTHER:PTHR10357:SF74 TIGRFAMs:TIGR02100 GO:GO:0004133
OMA:TWDGLGT PIR:D82388 RefSeq:NP_233413.1 ProteinModelPortal:Q9KKS1
DNASU:2612208 GeneID:2612208 KEGG:vch:VCA1029 PATRIC:20086574
ProtClustDB:CLSK869885 Uniprot:Q9KKS1
Length = 656
Score = 118 (46.6 bits), Expect = 8.2e-06, Sum P(2) = 8.2e-06
Identities = 29/94 (30%), Positives = 46/94 (48%)
Query: 49 QLKYLVDECHKAGLYVLLDVVHSHASKNVLDG----LNEFDGTQACFFHDGPRGTHPLWD 104
+LK + E H+ G+ V+LDVV++H ++ +G L D + H G +
Sbjct: 223 ELKTTIRELHRNGIQVILDVVYNHTAEGGTNGPVFNLKALDPNY--YLHHGDHYANYTGC 280
Query: 105 SRLFNYSEIEVLRFLLSNLRWYLEEYQFDGFRFD 138
+ S L ++ LR ++ EYQ DGFRFD
Sbjct: 281 GNTVDLSNQAALNLVMDTLRCWVTEYQIDGFRFD 314
Score = 54 (24.1 bits), Expect = 8.2e-06, Sum P(2) = 8.2e-06
Identities = 15/45 (33%), Positives = 22/45 (48%)
Query: 133 DGFRFDGVTSMLY-HNHGCGE-GFSGHYD---EYFGLNVDTDALI 172
DGF + S + HN GE GH D + +G DTD+++
Sbjct: 422 DGFTLQDLVSYKHKHNEANGEQNRDGHGDNRSDNYGFEGDTDSIV 466
>TIGR_CMR|VC_A1029 [details] [associations]
symbol:VC_A1029 "glycogen operon protein GlgX" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005977 "glycogen metabolic process" evidence=ISS]
InterPro:IPR004193 InterPro:IPR006047 InterPro:IPR011837
InterPro:IPR013781 InterPro:IPR015902 Pfam:PF00128 Pfam:PF02922
InterPro:IPR013780 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0043169 Gene3D:3.20.20.80 InterPro:IPR017853 SUPFAM:SSF51445
CAZy:GH13 Gene3D:2.60.40.1180 PANTHER:PTHR10357 GO:GO:0004553
CAZy:CBM48 GO:GO:0005977 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014756 SUPFAM:SSF81296 GO:GO:0005980 HSSP:P07762
KO:K02438 PANTHER:PTHR10357:SF74 TIGRFAMs:TIGR02100 GO:GO:0004133
OMA:TWDGLGT PIR:D82388 RefSeq:NP_233413.1 ProteinModelPortal:Q9KKS1
DNASU:2612208 GeneID:2612208 KEGG:vch:VCA1029 PATRIC:20086574
ProtClustDB:CLSK869885 Uniprot:Q9KKS1
Length = 656
Score = 118 (46.6 bits), Expect = 8.2e-06, Sum P(2) = 8.2e-06
Identities = 29/94 (30%), Positives = 46/94 (48%)
Query: 49 QLKYLVDECHKAGLYVLLDVVHSHASKNVLDG----LNEFDGTQACFFHDGPRGTHPLWD 104
+LK + E H+ G+ V+LDVV++H ++ +G L D + H G +
Sbjct: 223 ELKTTIRELHRNGIQVILDVVYNHTAEGGTNGPVFNLKALDPNY--YLHHGDHYANYTGC 280
Query: 105 SRLFNYSEIEVLRFLLSNLRWYLEEYQFDGFRFD 138
+ S L ++ LR ++ EYQ DGFRFD
Sbjct: 281 GNTVDLSNQAALNLVMDTLRCWVTEYQIDGFRFD 314
Score = 54 (24.1 bits), Expect = 8.2e-06, Sum P(2) = 8.2e-06
Identities = 15/45 (33%), Positives = 22/45 (48%)
Query: 133 DGFRFDGVTSMLY-HNHGCGE-GFSGHYD---EYFGLNVDTDALI 172
DGF + S + HN GE GH D + +G DTD+++
Sbjct: 422 DGFTLQDLVSYKHKHNEANGEQNRDGHGDNRSDNYGFEGDTDSIV 466
>TIGR_CMR|BA_4230 [details] [associations]
symbol:BA_4230 "alpha-amylase" species:198094 "Bacillus
anthracis str. Ames" [GO:0004556 "alpha-amylase activity"
evidence=ISS] [GO:0009313 "oligosaccharide catabolic process"
evidence=ISS] InterPro:IPR004185 InterPro:IPR006047
InterPro:IPR006589 InterPro:IPR013781 InterPro:IPR015902
Pfam:PF00128 Pfam:PF02903 SMART:SM00642 InterPro:IPR013780
Gene3D:2.60.40.10 InterPro:IPR013783 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0043169 Gene3D:3.20.20.80
InterPro:IPR017853 SUPFAM:SSF51445 CAZy:GH13 GO:GO:0005975
Gene3D:2.60.40.1180 PANTHER:PTHR10357 GO:GO:0004553
InterPro:IPR014756 SUPFAM:SSF81296 CAZy:CBM34 RefSeq:NP_846465.1
RefSeq:YP_020872.1 RefSeq:YP_030173.1 HSSP:P38940
ProteinModelPortal:Q81ML7 SMR:Q81ML7 DNASU:1089021
EnsemblBacteria:EBBACT00000009332 EnsemblBacteria:EBBACT00000017860
EnsemblBacteria:EBBACT00000021056 GeneID:1089021 GeneID:2818229
GeneID:2850897 KEGG:ban:BA_4230 KEGG:bar:GBAA_4230 KEGG:bat:BAS3923
HOGENOM:HOG000055362 OMA:EIWHDAM ProtClustDB:CLSK873463
BioCyc:BANT260799:GJAJ-3980-MONOMER
BioCyc:BANT261594:GJ7F-4114-MONOMER Uniprot:Q81ML7
Length = 586
Score = 130 (50.8 bits), Expect = 9.1e-06, P = 9.1e-06
Identities = 50/163 (30%), Positives = 76/163 (46%)
Query: 7 GTPEQLKYLVDECHKAGLFGTP-----EQLKY-LVDECHKAGLFGTPEQLKYLVDECHKA 60
G + L YLV + +G++ TP KY +D FGT E K LV CH
Sbjct: 177 GIIQNLDYLV-KLGISGIYFTPIFKAHSNHKYDTIDYMEIDPQFGTKETFKELVQACHTH 235
Query: 61 GLYVLLDVVHSHASKNVLDGLNEF--DGTQACF-----FHDGPRGTHPL--WDSRLF--- 108
G+ V+LD V +H S D + +G Q+ + H+ P T PL +D+ F
Sbjct: 236 GIKVMLDAVFNH-SGYFFDKFQDVLQNGEQSAYKEWFHIHEFPIRTEPLPNYDTFAFTPY 294
Query: 109 ----NYSEIEVLRFLLSNLRWYLEEYQFDGFRFDGVTSMLYHN 147
N + +V +LL R+++ E+ DG+R D V + + HN
Sbjct: 295 MPKLNTAHPDVKEYLLEVGRYWVREFNIDGWRLD-VANEVDHN 336
>TIGR_CMR|GSU_2358 [details] [associations]
symbol:GSU_2358 "isoamylase family protein" species:243231
"Geobacter sulfurreducens PCA" [GO:0016052 "carbohydrate catabolic
process" evidence=ISS] [GO:0019156 "isoamylase activity"
evidence=ISS] InterPro:IPR006047 InterPro:IPR012768
InterPro:IPR013781 InterPro:IPR015902 Pfam:PF00128
PIRSF:PIRSF006337 GO:GO:0005737 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0043169 Gene3D:3.20.20.80
InterPro:IPR017853 SUPFAM:SSF51445 PANTHER:PTHR10357 EMBL:AE017180
GenomeReviews:AE017180_GR InterPro:IPR014756 SUPFAM:SSF81296
GO:GO:0005992 InterPro:IPR022567 Pfam:PF11941 HOGENOM:HOG000155669
KO:K01236 OMA:YAPDSAY GO:GO:0033942 PANTHER:PTHR10357:SF21
TIGRFAMs:TIGR02402 RefSeq:NP_953405.1 ProteinModelPortal:Q74AJ6
GeneID:2686146 KEGG:gsu:GSU2358 PATRIC:22027565
ProtClustDB:CLSK924601 BioCyc:GSUL243231:GH27-2352-MONOMER
Uniprot:Q74AJ6
Length = 630
Score = 125 (49.1 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 46/155 (29%), Positives = 71/155 (45%)
Query: 44 FGTPEQLKYLVDECHKAGLYVLLDVVHSHASKNVLDGLNEFDGTQACFFHDGPRGTHPLW 103
+G P+ LK LVD CH+ GL V+LDVV++H + L+ F A +F D R P
Sbjct: 175 YGGPDGLKSLVDACHRRGLAVILDVVYNHLGPEG-NYLHAF----APYFTDHYRT--PWG 227
Query: 104 DSRLFNYSEIEVLR-FLLSNLRWYLEEYQFDGFRFDGVTSMLYHNHGCGEGFSGHYDEYF 162
D+ F+ + +R +++ N ++ EY DG R D + HG + +GH
Sbjct: 228 DAVNFDGPGSDGVRHYVIGNALHWISEYHLDGLRLDAI-------HGIYDFSAGHILRDI 280
Query: 163 GLNVDTDALIYLMVANKFLHDKYPEIITIAEDVSG 197
VD+ A + ++ TIA SG
Sbjct: 281 TRAVDSLARHLGRTVHVIAESDLNDVRTIAPPESG 315
>UNIPROTKB|Q81KP1 [details] [associations]
symbol:BAS4597 "Putative pullulanase" species:1392
"Bacillus anthracis" [GO:0004556 "alpha-amylase activity"
evidence=ISS] [GO:0005975 "carbohydrate metabolic process"
evidence=ISS] InterPro:IPR004193 InterPro:IPR006047
InterPro:IPR013781 InterPro:IPR015902 Pfam:PF00128 Pfam:PF02922
Gene3D:2.60.40.10 InterPro:IPR013783 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0043169 Gene3D:3.20.20.80
InterPro:IPR017853 SUPFAM:SSF51445 CAZy:GH13 GO:GO:0005975
PANTHER:PTHR10357 CAZy:CBM48 InterPro:IPR014756 SUPFAM:SSF81296
GO:GO:0004556 RefSeq:NP_847150.1 RefSeq:YP_021599.1
RefSeq:YP_030843.1 ProteinModelPortal:Q81KP1 IntAct:Q81KP1
DNASU:1085682 EnsemblBacteria:EBBACT00000009751
EnsemblBacteria:EBBACT00000017737 EnsemblBacteria:EBBACT00000021503
GeneID:1085682 GeneID:2818501 GeneID:2850415 KEGG:ban:BA_4953
KEGG:bar:GBAA_4953 KEGG:bat:BAS4597 HOGENOM:HOG000059883 KO:K01200
OMA:YNRIVEC ProtClustDB:CLSK873560
BioCyc:BANT260799:GJAJ-4653-MONOMER
BioCyc:BANT261594:GJ7F-4811-MONOMER InterPro:IPR011840
TIGRFAMs:TIGR02104 Uniprot:Q81KP1
Length = 713
Score = 113 (44.8 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 28/93 (30%), Positives = 51/93 (54%)
Query: 49 QLKYLVDECHKAGLYVLLDVVHSHASKNVLDGLNEFDGTQACFFHDGPRGTHPLWDSRLF 108
+ K L++ H+ G+ V++DVV++H + L + +F G G P + +
Sbjct: 318 ECKQLIETFHEHGIRVIIDVVYNHVYERELSSFEKL--VPGYYFRHGENGM-PSNGTGVG 374
Query: 109 N--YSEIEVLR-FLLSNLRWYLEEYQFDGFRFD 138
N SE +++R F++ ++ ++L EY DGFRFD
Sbjct: 375 NDIASERKMMRKFIVESILYWLTEYNVDGFRFD 407
Score = 54 (24.1 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 16/52 (30%), Positives = 24/52 (46%)
Query: 131 QF-DGFRFDGVTSMLYHNHGCGEGFSGHYDEYFGLNVDTDALIYLMVANKFL 181
QF D FR DG+ +H + G F GH D + + +L+ + FL
Sbjct: 463 QFNDQFR-DGIKGSTFHINKRGFAFGGHVDRNHLRYIASGSLLSMKETGLFL 513
>TIGR_CMR|BA_4953 [details] [associations]
symbol:BA_4953 "pullulanase, putative" species:198094
"Bacillus anthracis str. Ames" [GO:0004556 "alpha-amylase activity"
evidence=ISS] [GO:0005975 "carbohydrate metabolic process"
evidence=ISS] InterPro:IPR004193 InterPro:IPR006047
InterPro:IPR013781 InterPro:IPR015902 Pfam:PF00128 Pfam:PF02922
Gene3D:2.60.40.10 InterPro:IPR013783 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0043169 Gene3D:3.20.20.80
InterPro:IPR017853 SUPFAM:SSF51445 CAZy:GH13 GO:GO:0005975
PANTHER:PTHR10357 CAZy:CBM48 InterPro:IPR014756 SUPFAM:SSF81296
GO:GO:0004556 RefSeq:NP_847150.1 RefSeq:YP_021599.1
RefSeq:YP_030843.1 ProteinModelPortal:Q81KP1 IntAct:Q81KP1
DNASU:1085682 EnsemblBacteria:EBBACT00000009751
EnsemblBacteria:EBBACT00000017737 EnsemblBacteria:EBBACT00000021503
GeneID:1085682 GeneID:2818501 GeneID:2850415 KEGG:ban:BA_4953
KEGG:bar:GBAA_4953 KEGG:bat:BAS4597 HOGENOM:HOG000059883 KO:K01200
OMA:YNRIVEC ProtClustDB:CLSK873560
BioCyc:BANT260799:GJAJ-4653-MONOMER
BioCyc:BANT261594:GJ7F-4811-MONOMER InterPro:IPR011840
TIGRFAMs:TIGR02104 Uniprot:Q81KP1
Length = 713
Score = 113 (44.8 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 28/93 (30%), Positives = 51/93 (54%)
Query: 49 QLKYLVDECHKAGLYVLLDVVHSHASKNVLDGLNEFDGTQACFFHDGPRGTHPLWDSRLF 108
+ K L++ H+ G+ V++DVV++H + L + +F G G P + +
Sbjct: 318 ECKQLIETFHEHGIRVIIDVVYNHVYERELSSFEKL--VPGYYFRHGENGM-PSNGTGVG 374
Query: 109 N--YSEIEVLR-FLLSNLRWYLEEYQFDGFRFD 138
N SE +++R F++ ++ ++L EY DGFRFD
Sbjct: 375 NDIASERKMMRKFIVESILYWLTEYNVDGFRFD 407
Score = 54 (24.1 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 16/52 (30%), Positives = 24/52 (46%)
Query: 131 QF-DGFRFDGVTSMLYHNHGCGEGFSGHYDEYFGLNVDTDALIYLMVANKFL 181
QF D FR DG+ +H + G F GH D + + +L+ + FL
Sbjct: 463 QFNDQFR-DGIKGSTFHINKRGFAFGGHVDRNHLRYIASGSLLSMKETGLFL 513
>TAIR|locus:2061216 [details] [associations]
symbol:ISA1 "isoamylase 1" species:3702 "Arabidopsis
thaliana" [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds"
evidence=IEA] [GO:0004556 "alpha-amylase activity" evidence=ISS]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA;ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0043169 "cation
binding" evidence=IEA] [GO:0010021 "amylopectin biosynthetic
process" evidence=IMP] [GO:0010368 "chloroplast isoamylase complex"
evidence=IDA] [GO:0019156 "isoamylase activity" evidence=IDA;IMP]
[GO:0000023 "maltose metabolic process" evidence=RCA] [GO:0019252
"starch biosynthetic process" evidence=RCA] [GO:0043085 "positive
regulation of catalytic activity" evidence=RCA] InterPro:IPR004193
InterPro:IPR006047 InterPro:IPR013781 InterPro:IPR015902
Pfam:PF00128 Pfam:PF02922 UniPathway:UPA00152 InterPro:IPR013780
Gene3D:2.60.40.10 InterPro:IPR013783 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0043169 Gene3D:3.20.20.80
InterPro:IPR017853 SUPFAM:SSF51445 CAZy:GH13 Gene3D:2.60.40.1180
PANTHER:PTHR10357 CAZy:CBM48 InterPro:IPR014756 SUPFAM:SSF81296
EMBL:AF002109 UniGene:At.20831 UniGene:At.71018 GO:GO:0010021
GO:GO:0019252 eggNOG:COG1523 HOGENOM:HOG000239197 KO:K02438
EMBL:BT000443 EMBL:BT010348 IPI:IPI00520721 PIR:B84823
RefSeq:NP_181522.1 HSSP:P10342 ProteinModelPortal:O04196 SMR:O04196
IntAct:O04196 STRING:O04196 PaxDb:O04196 PRIDE:O04196 ProMEX:O04196
EnsemblPlants:AT2G39930.1 GeneID:818580 KEGG:ath:AT2G39930
TAIR:At2g39930 InParanoid:O04196 OMA:HAFVNDQ PhylomeDB:O04196
ProtClustDB:CLSN2683381 BRENDA:3.2.1.68 Genevestigator:O04196
GO:GO:0010368 GO:GO:0019156 Uniprot:O04196
Length = 783
Score = 122 (48.0 bits), Expect = 0.00011, P = 0.00011
Identities = 31/94 (32%), Positives = 50/94 (53%)
Query: 49 QLKYLVDECHKAGLYVLLDVVHSHASKNVLDG-LNEFDGTQ-ACFFHDGPRGTHPLWDS- 105
+ K LV E HK G+ V++DVV +H ++ G + F G + ++ P+G +
Sbjct: 317 EFKILVKEAHKRGIEVIMDVVLNHTAEGNEKGPIFSFRGVDNSVYYMLAPKGEFYNYSGC 376
Query: 106 -RLFNYSEIEVLRFLLSNLRWYLEEYQFDGFRFD 138
FN + V +F+L LR+++ E DGFRFD
Sbjct: 377 GNTFNCNHPVVRQFILDCLRYWVTEMHVDGFRFD 410
>ASPGD|ASPL0000038434 [details] [associations]
symbol:amyF species:162425 "Emericella nidulans"
[GO:0005982 "starch metabolic process" evidence=IEP] [GO:0005575
"cellular_component" evidence=ND] [GO:0016052 "carbohydrate
catabolic process" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0004556 "alpha-amylase activity" evidence=IEA]
InterPro:IPR006046 InterPro:IPR006047 InterPro:IPR006589
InterPro:IPR013777 InterPro:IPR013781 InterPro:IPR015340
InterPro:IPR015902 Pfam:PF00128 Pfam:PF09260 PIRSF:PIRSF001024
PRINTS:PR00110 SMART:SM00642 InterPro:IPR013780 Gene3D:3.20.20.80
InterPro:IPR017853 SUPFAM:SSF51445 CAZy:GH13 eggNOG:COG0366
Gene3D:2.60.40.1180 PANTHER:PTHR10357 GO:GO:0005509 EMBL:BN001306
GO:GO:0016052 GO:GO:0004556 HOGENOM:HOG000165530 EMBL:AACD01000055
OrthoDB:EOG4SFDF6 OMA:GYHGYWQ RefSeq:XP_660992.1
ProteinModelPortal:Q5B7U2 EnsemblFungi:CADANIAT00009652
GeneID:2874438 KEGG:ani:AN3388.2 Uniprot:Q5B7U2
Length = 462
Score = 113 (44.8 bits), Expect = 0.00060, P = 0.00060
Identities = 32/107 (29%), Positives = 52/107 (48%)
Query: 44 FGTPEQLKYLVDECHKAGLYVLLDVVHSHASKNVLDGLNEFDGTQACFFHDGPRGTHPLW 103
+GT + LK LV H+ G+Y++ DVV +H + D E +Q +H +
Sbjct: 108 YGTADDLKSLVSAAHEKGIYIMADVVANHMGSPISDNQPE-SLSQESAYHSACTIDYSSQ 166
Query: 104 DS----RLFN-----YSEIEVLRFLLSN-LRWYLEEYQFDGFRFDGV 140
+S R+ + +E E +R L + W ++EY+FDG R D V
Sbjct: 167 ESIETCRIADDLPDVNTESEEIRTLFKEWITWLVKEYEFDGLRIDTV 213
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.143 0.456 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 237 237 0.00090 113 3 11 22 0.41 33
32 0.43 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 36
No. of states in DFA: 608 (65 KB)
Total size of DFA: 204 KB (2113 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 20.62u 0.11s 20.73t Elapsed: 00:00:06
Total cpu time: 20.63u 0.11s 20.74t Elapsed: 00:00:06
Start: Thu Aug 15 17:13:27 2013 End: Thu Aug 15 17:13:33 2013