RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy9004
(237 letters)
>d1m7xa3 c.1.8.1 (A:227-622) 1,4-alpha-glucan branching enzyme,
central domain {Escherichia coli [TaxId: 562]}
Length = 396
Score = 78.1 bits (191), Expect = 2e-17
Identities = 56/173 (32%), Positives = 85/173 (49%), Gaps = 3/173 (1%)
Query: 44 FGTPEQLKYLVDECHKAGLYVLLDVVHSHASKNVLDGLNEFDGTQACFFHDGPRGTHPLW 103
FGT + +Y +D H AGL V+LD V H + L EFDGT D G H W
Sbjct: 86 FGTRDDFRYFIDAAHAAGLNVILDWVPGHFPTDD-FALAEFDGTNLYEHSDPREGYHQDW 144
Query: 104 DSRLFNYSEIEVLRFLLSNLRWYLEEYQFDGFRFDGVTSMLYHNHGCGEGFSGHYDEYFG 163
++ ++NY EV FL+ N +++E + D R D V SM+Y ++ FG
Sbjct: 145 NTLIYNYGRREVSNFLVGNALYWIERFGIDALRVDAVASMIYRDY--SRKEGEWIPNEFG 202
Query: 164 LNVDTDALIYLMVANKFLHDKYPEIITIAEDVSGMPASCRPVTEGGTGFDYRL 216
+ +A+ +L N+ L ++ +T+AE+ + P RP GG GF Y+
Sbjct: 203 GRENLEAIEFLRNTNRILGEQVSGAVTMAEESTDFPGVSRPQDMGGLGFWYKW 255
>d1bf2a3 c.1.8.1 (A:163-637) Isoamylase, central domain {Pseudomonas
amyloderamosa [TaxId: 32043]}
Length = 475
Score = 62.8 bits (151), Expect = 5e-12
Identities = 26/164 (15%), Positives = 56/164 (34%), Gaps = 14/164 (8%)
Query: 44 FGTPEQLKYLVDECHKAGLYVLLDVVHSHASK--------NVLDGLNEFDGTQACFFHDG 95
G + + +V H AG+ V +DVV++H ++ + + G +++
Sbjct: 107 GGPTAEFQAMVQAFHNAGIKVYMDVVYNHTAEGGTWTSSDPTTATIYSWRGLDNATYYEL 166
Query: 96 PRGTHPLWDSRL----FNYSEIEVLRFLLSNLRWYLEEYQFDGFRFDGVTSMLYHNHGCG 151
G +D+ FN ++ +L ++ DGFRFD + +
Sbjct: 167 TSGNQYFYDNTGIGANFNTYNTVAQNLIVDSLAYWANTMGVDGFRFDLASVLGNSCL--N 224
Query: 152 EGFSGHYDEYFGLNVDTDALIYLMVANKFLHDKYPEIITIAEDV 195
++ + DA + N+ L + +
Sbjct: 225 GAYTASAPNCPNGGYNFDAADSNVAINRILREFTVRPAAGGSGL 268
>d1eh9a3 c.1.8.1 (A:91-490) Glycosyltrehalose trehalohydrolase,
central domain {Archaeon Sulfolobus solfataricus, km1
[TaxId: 2287]}
Length = 400
Score = 52.4 bits (124), Expect = 1e-08
Identities = 32/107 (29%), Positives = 52/107 (48%), Gaps = 6/107 (5%)
Query: 44 FGTPEQLKYLVDECHKAGLYVLLDVVHSHASKNVLDGLNEFDGTQACFFHDGPRGTHPLW 103
+G PE + LVDE HK GL V+LDVV++H + + P G +
Sbjct: 74 YGGPEGFRKLVDEAHKKGLGVILDVVYNHVGPEGNYMVKLGP--YFSQKYKTPWGLTFNF 131
Query: 104 DSRLFNYSEIEVLRFLLSNLRWYLEEYQFDGFRFDGVTSMLYHNHGC 150
D + V +F+L N+ ++++EY DGFR D V +++ +
Sbjct: 132 DDAESDE----VRKFILENVEYWIKEYNVDGFRLDAVHAIIDTSPKH 174
>d1gcya2 c.1.8.1 (A:1-357) G4-amylase (1,4-alpha-D-glucan
maltotetrahydrolase) {Pseudomonas stutzeri [TaxId: 316]}
Length = 357
Score = 52.2 bits (124), Expect = 1e-08
Identities = 30/171 (17%), Positives = 48/171 (28%), Gaps = 12/171 (7%)
Query: 44 FGTPEQLKYLVDECHKAGLYVLLDVVHSHASKNVLDGLNEFDGTQACFFHDGPRGTHPLW 103
+G+ QL+ AG+ VL DVV +H ++ D Q + +D +
Sbjct: 89 YGSDAQLRQAASALGGAGVKVLYDVVPNHMNRGYPDKEINLPAGQGFWRNDCADPGNYPN 148
Query: 104 DSRL----------FNYSEIEVLRFLLSNLRWYLEEYQFDGFRFDGVTSMLYHNHGCGEG 153
D N +V +Y GFRFD V
Sbjct: 149 DCDDGDRFIGGDADLNTGHPQVYGMFRDEFTNLRSQYGAGGFRFDFVRGYAP--ERVNSW 206
Query: 154 FSGHYDEYFGLNVDTDALIYLMVANKFLHDKYPEIITIAEDVSGMPASCRP 204
+ D F + + + +II D + P
Sbjct: 207 MTDSADNSFCVGELWKGPSEYPNWDWRNTASWQQIIKDWSDRAKCPVFDFA 257
>d1jaea2 c.1.8.1 (A:1-378) Animal alpha-amylase {Yellow mealworm
(Tenebrio molitor), larva [TaxId: 7067]}
Length = 378
Score = 50.7 bits (120), Expect = 4e-08
Identities = 23/154 (14%), Positives = 40/154 (25%), Gaps = 22/154 (14%)
Query: 44 FGTPEQLKYLVDECHKAGLYVLLDVVHSHASKN-------------------VLDGLNEF 84
G + C+ AG+ + +D V +H + V G +F
Sbjct: 71 SGDESAFTDMTRRCNDAGVRIYVDAVINHMTGMNGVGTSGSSADHDGMNYPAVPYGSGDF 130
Query: 85 DGTQACFFHDGPRGTHPLWDSRL--FNYSEIEVLRFLLSNLRWYLEEYQFDGFRFDGVTS 142
+ L N V L+ + + + GFR D
Sbjct: 131 HSPCEVNNYQDADNVRNCELVGLRDLNQGSDYVRGVLIDYMNHMI-DLGVAGFRVDAAKH 189
Query: 143 MLYHNHGCGEGFSGHYDEYFGLNVDTDALIYLMV 176
M + + + +G IY V
Sbjct: 190 MSPGDLSVIFSGLKNLNTDYGFADGARPFIYQEV 223
>d1j0ha3 c.1.8.1 (A:124-505) Neopullulanase, central domain
{Bacillus stearothermophilus [TaxId: 1422]}
Length = 382
Score = 49.3 bits (116), Expect = 1e-07
Identities = 33/148 (22%), Positives = 54/148 (36%), Gaps = 17/148 (11%)
Query: 44 FGTPEQLKYLVDECHKAGLYVLLDVVHSHASKNVL---------------DGLNEFDGTQ 88
FG E LK L+D CH+ G+ V+LD V +H D + +
Sbjct: 96 FGDKETLKTLIDRCHEKGIRVMLDAVFNHCGYEFAPFQDVWKNGESSKYKDWFHIHEFPL 155
Query: 89 ACFFHDGPRGTHPLWDSRLFNYSEIEVLRFLLSNLRWYLEEYQFDGFRFDGVTSML--YH 146
+ N + EV R+LL +++ E+ DG+R D + +
Sbjct: 156 QTEPRPNYDTFAFVPQMPKLNTANPEVKRYLLDVATYWIREFDIDGWRLDVANEIDHEFW 215
Query: 147 NHGCGEGFSGHYDEYFGLNVDTDALIYL 174
E + D Y + DA+ +L
Sbjct: 216 REFRQEVKALKPDVYILGEIWHDAMPWL 243
>d2d3na2 c.1.8.1 (A:5-398) Bacterial alpha-amylase {Bacillus sp. 707
[TaxId: 1416]}
Length = 394
Score = 48.1 bits (113), Expect = 3e-07
Identities = 19/119 (15%), Positives = 33/119 (27%), Gaps = 2/119 (1%)
Query: 44 FGTPEQLKYLVDECHKAGLYVLLDVVHSHASKNVLDGLNEFDGTQACFFHDGPRGTHPLW 103
+GT QL+ V G+ V DVV +H D + + T
Sbjct: 75 YGTRSQLQAAVTSLKNNGIQVYGDVVMNHKGGA--DATEMVRAVEVNPNNRNQEVTGEYT 132
Query: 104 DSRLFNYSEIEVLRFLLSNLRWYLEEYQFDGFRFDGVTSMLYHNHGCGEGFSGHYDEYF 162
+ S + D + + + +Y G G+ + D
Sbjct: 133 IEAWTRFDFPGRGNTHSSFKWRWYHFDGVDWDQSRRLNNRIYKFRGHGKAWDWEVDTEN 191
Score = 33.4 bits (75), Expect = 0.021
Identities = 26/163 (15%), Positives = 44/163 (26%), Gaps = 25/163 (15%)
Query: 6 FGTPEQLKYLVDECHKAGL-----------------------FGTPEQLKYLVDECHKAG 42
+GT QL+ V G+ P V +
Sbjct: 75 YGTRSQLQAAVTSLKNNGIQVYGDVVMNHKGGADATEMVRAVEVNPNNRNQEVTGEYTIE 134
Query: 43 LFGTPEQLKYLVDECHKAGLYVLLDVVHSHASKNVLDGLNEF--DGTQACFFHDGPRGTH 100
+ + + D V S+ + + + +F G + D G +
Sbjct: 135 AWTRFDFPGRGNTHSSFKWRWYHFDGVDWDQSRRLNNRIYKFRGHGKAWDWEVDTENGNY 194
Query: 101 PLWDSRLFNYSEIEVLRFLLSNLRWYLEEYQFDGFRFDGVTSM 143
+ EV+ L + WY DGFR D V +
Sbjct: 195 DYLMYADIDMDHPEVVNELRNWGVWYTNTLGLDGFRIDAVKHI 237
>d1iv8a2 c.1.8.1 (A:1-653) Maltooligosyl trehalose synthase
{Archaeon Sulfolobus acidocaldarius [TaxId: 2285]}
Length = 653
Score = 48.4 bits (115), Expect = 3e-07
Identities = 8/31 (25%), Positives = 18/31 (58%)
Query: 44 FGTPEQLKYLVDECHKAGLYVLLDVVHSHAS 74
G ++ + L++ H GL ++ D+V +H +
Sbjct: 62 LGGEKEYRRLIETAHTIGLGIIQDIVPNHMA 92
Score = 42.6 bits (100), Expect = 2e-05
Identities = 26/179 (14%), Positives = 44/179 (24%), Gaps = 37/179 (20%)
Query: 6 FGTPEQLKYLVDECHKAGL-----------------FGTPEQLKY-----------LVDE 37
G ++ + L++ H GL + + LK E
Sbjct: 62 LGGEKEYRRLIETAHTIGLGIIQDIVPNHMAVNSLNWRLMDVLKMGKKSKYYTYFDFFPE 121
Query: 38 CHKAGLFGTPEQLKYLVDECH-----KAGLYVLLDVVHSHASKNVLDGLNEFDGTQACFF 92
K L E L ++ + Y L V + + + Q
Sbjct: 122 DDKIRLPILGEDLDTVISKGLLKIVKDGDEYFLEYFKWKLPLTEVGNDIYDTLQKQNYTL 181
Query: 93 HD--GPRGTHPLWDSRLFNYSEIEVLRFLLSNLRWYLEEYQFDGFRFDGVTSMLYHNHG 149
P +D +E + L+ DG+R D LY
Sbjct: 182 MSWKNPPSYRRFFDVNTLIGVNVEKDHVFQESHSKILD-LDVDGYRID-HIDGLYDPEK 238
>d1g5aa2 c.1.8.1 (A:1-554) Amylosucrase {Neisseria polysaccharea
[TaxId: 489]}
Length = 554
Score = 47.6 bits (112), Expect = 5e-07
Identities = 23/169 (13%), Positives = 47/169 (27%), Gaps = 14/169 (8%)
Query: 44 FGTPEQLKYLVDECHKAGLYVLLDVVHSHASKNVLDGLNEFDGTQ--ACFFHDGPRGTHP 101
GT L+ ++ H+AG+ ++D + +H S G F++ P P
Sbjct: 159 LGTIGDLREVIAALHEAGISAVVDFIFNHTSNEHEWAQRCAAGDPLFDNFYYIFPDRRMP 218
Query: 102 LWDSRLFNYSEIEVLRFLLSNLRWYLEEYQFDGFRFDGVTSMLYHNHGCGEGFSGHYDEY 161
R F + + + + N+ F E
Sbjct: 219 DQYDRTLREI------FPDQHPGGFSQLEDGRWVWTTFNSFQWDLNYSNPWVFRAMAGEM 272
Query: 162 FGLNVDT------DALIYLMVANKFLHDKYPEIITIAEDVSGMPASCRP 204
L DA+ ++ + P+ + + + P
Sbjct: 273 LFLANLGVDILRMDAVAFIWKQMGTSCENLPQAHALIRAFNAVMRIAAP 321
Score = 31.1 bits (69), Expect = 0.12
Identities = 6/19 (31%), Positives = 11/19 (57%)
Query: 6 FGTPEQLKYLVDECHKAGL 24
GT L+ ++ H+AG+
Sbjct: 159 LGTIGDLREVIAALHEAGI 177
>d1g94a2 c.1.8.1 (A:1-354) Bacterial alpha-amylase
{Pseudoalteromonas haloplanktis (Alteromonas
haloplanktis) [TaxId: 228]}
Length = 354
Score = 47.2 bits (111), Expect = 6e-07
Identities = 27/193 (13%), Positives = 53/193 (27%), Gaps = 38/193 (19%)
Query: 44 FGTPEQLKYLVDECHKAGLYVLLDVVHSHASKNV-------LDGLNEFDGTQACFFHDGP 96
G Q +V+ C AG+ + +D + +H + G F FH+
Sbjct: 61 GGNRAQFIDMVNRCSAAGVDIYVDTLINHMAAGSGTGTAGNSFGNKSFPIYSPQDFHESC 120
Query: 97 RGTHPLW-------------DSRLFNYSEIEVLRFLLSNLRWYLEEYQFDGFRFDGVTSM 143
+ + + + V + + + + GFRFD +
Sbjct: 121 TINNSDYGNDRYRVQNCELVGLADLDTASNYVQNTIAAYINDL-QAIGVKGFRFDASKHV 179
Query: 144 -----------------LYHNHGCGEGFSGHYDEYFGLNVDTDALIYLMVANKFLHDKYP 186
++ G + EY + T+ + N F +
Sbjct: 180 AASDIQSLMAKVNGSPVVFQEVIDQGGEAVGASEYLSTGLVTEFKYSTELGNTFRNGSLA 239
Query: 187 EIITIAEDVSGMP 199
+ E MP
Sbjct: 240 WLSNFGEGWGFMP 252
>d1m53a2 c.1.8.1 (A:43-520) Isomaltulose synthase PalI {Klebsiella
sp., lx3 [TaxId: 576]}
Length = 478
Score = 46.5 bits (109), Expect = 1e-06
Identities = 31/217 (14%), Positives = 55/217 (25%), Gaps = 32/217 (14%)
Query: 44 FGTPEQLKYLVDECHKAGLYVLLDVVH-----SHASKNVLDGLNEFDGTQACFFHDGPRG 98
+GT E LV E K + +++DVV H F+ DG
Sbjct: 75 YGTMEDFDSLVAEMKKRNMRLMIDVVINHTSDQHPWFIQSKSDKNNPYRDYYFWRDGKDN 134
Query: 99 THP--------------------------LWDSRLFNYSEIEVLRFLLSNLRWYLEEYQF 132
P N+ +V L + LR++L +
Sbjct: 135 QPPNNYPSFFGGSAWQKDAKSGQYYLHYFARQQPDLNWDNPKVREDLYAMLRFWL-DKGV 193
Query: 133 DGFRFDGVTSMLYHNHGCGEGFSGHYDEYFGLNVDTDALIYLMVANKFLHDKYPEIITIA 192
G RFD V + + + + Y+ N+ + +Y
Sbjct: 194 SGMRFDTVATYSKIPGFPNLTPEQQKNFAEQYTMGPNIHRYIQEMNRKVLSRYDVATAGE 253
Query: 193 EDVSGMPASCRPVTEGGTGFDYRLGRPGLDKSFYGNA 229
+ S + + + N
Sbjct: 254 IFGVPLDRSSQFFDRRRHELNMAFMFDLIRLDRDSNE 290
>d1mxga2 c.1.8.1 (A:1-361) Bacterial alpha-amylase {Archaeon
Pyrococcus woesei [TaxId: 2262]}
Length = 361
Score = 43.7 bits (102), Expect = 8e-06
Identities = 30/164 (18%), Positives = 51/164 (31%), Gaps = 21/164 (12%)
Query: 44 FGTPEQLKYLVDECHKAGLYVLLDVVHSHASKNVLDGLNEFDGTQACFFHDGPRGTHP-- 101
FG+ E+L L+ H G+ V+ DVV +H + L+ F G +
Sbjct: 83 FGSKEELVRLIQTAHAYGIKVIADVVINHRAGGDLEWNPFVGDYTWTDFSKVASGKYTAN 142
Query: 102 ----------------LWDSRLFNYSEIEVLRFLLSNLR---WYLEEYQFDGFRFDGVTS 142
+ + +L + YL FDG+RFD V
Sbjct: 143 YLDFHPNELHCCDEGTFGGFPDICHHKEWDQYWLWKSNESYAAYLRSIGFDGWRFDYVKG 202
Query: 143 MLYHNHGCGEGFSGHYDEYFGLNVDTDALIYLMVANKFLHDKYP 186
+ G + + + DAL+ + +P
Sbjct: 203 YGAWVVRDWLNWWGGWAVGEYWDTNVDALLSWAYESGAKVFDFP 246
>d1uoka2 c.1.8.1 (A:1-479) Oligo-1,6, glucosidase {Bacillus cereus
[TaxId: 1396]}
Length = 479
Score = 43.1 bits (100), Expect = 1e-05
Identities = 32/216 (14%), Positives = 60/216 (27%), Gaps = 36/216 (16%)
Query: 44 FGTPEQLKYLVDECHKAGLYVLLDVVHSHASKNVLDGL-----NEFDGTQACFFHDGPRG 98
FGT E L+ E H+ + +++D+V +H S + + + G G
Sbjct: 75 FGTMEDWDELLHEMHERNMKLMMDLVVNHTSDEHNWFIESRKSKDNKYRDYYIWRPGKEG 134
Query: 99 THPLWDSRLFNYSEIE--------------------------VLRFLLSNLRWYLEEYQF 132
P F+ S + V + + ++++L E
Sbjct: 135 KEPNNWGAAFSGSAWQYDEMTDEYYLHLFSKKQPDLNWDNEKVRQDVYEMMKFWL-EKGI 193
Query: 133 DGFRFDGVTSMLYHNHGCGEGFSGHYDEYFGLNVDTDA---LIYLMVANKFLHDKYPEII 189
DGFR D + + G + G + YL N+ + Y +
Sbjct: 194 DGFRMDVIN-FISKEEGLPTVETEEEGYVSGHKHFMNGPNIHKYLHEMNEEVLSHYDIMT 252
Query: 190 TIAEDVSGMPASCRPVTEGGTGFDYRLGRPGLDKSF 225
+ E +D
Sbjct: 253 VGEMPGVTTEEAKLYTGEERKELQMVFQFEHMDLDS 288
>d1hvxa2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 393
Score = 43.1 bits (100), Expect = 1e-05
Identities = 20/119 (16%), Positives = 34/119 (28%), Gaps = 10/119 (8%)
Query: 44 FGTPEQLKYLVDECHKAGLYVLLDVVHSHASKNVLDGLNEFDGTQACFFHDGPRGTHPLW 103
+GT Q + H AG+ V DVV H + + GT+ +
Sbjct: 78 YGTKAQYLQAIQAAHAAGMQVYADVVFDHKGGADGTEWVDAVEVNPSDRNQEISGTYQIQ 137
Query: 104 DSRLFNYSEIEVLRFLLSNLRWYLEEYQFDGFRFDGVTSMLYHNHGCGEGFSGHYDEYF 162
F++ +++ + FDGV F G +
Sbjct: 138 AWTKFDFPGRG----------NTYSSFKWRWYHFDGVDWDESRKLSRIYKFRGIGKAWD 186
Score = 31.5 bits (70), Expect = 0.075
Identities = 26/167 (15%), Positives = 45/167 (26%), Gaps = 24/167 (14%)
Query: 6 FGTPEQLKYLVDECHKAGL------------------FGTPEQLKYLVDECHKAGLFGTP 47
+GT Q + H AG+ + ++ +G +
Sbjct: 78 YGTKAQYLQAIQAAHAAGMQVYADVVFDHKGGADGTEWVDAVEVNPSDRNQEISGTYQIQ 137
Query: 48 EQLKYLVDECHKAGLYVLLDVVHSHASK----NVLDGLNEFDGTQACFFH--DGPRGTHP 101
K+ H L + +F G + D G +
Sbjct: 138 AWTKFDFPGRGNTYSSFKWRWYHFDGVDWDESRKLSRIYKFRGIGKAWDWEVDTENGNYD 197
Query: 102 LWDSRLFNYSEIEVLRFLLSNLRWYLEEYQFDGFRFDGVTSMLYHNH 148
+ EV+ L S +WY+ DGFR D V + +
Sbjct: 198 YLMYADLDMDHPEVVTELKSWGKWYVNTTNIDGFRLDAVKHIKFSFF 244
>d1ht6a2 c.1.8.1 (A:1-347) Plant alpha-amylase {Barley (Hordeum
vulgare), AMY1 isozyme [TaxId: 4513]}
Length = 347
Score = 42.6 bits (99), Expect = 2e-05
Identities = 25/121 (20%), Positives = 37/121 (30%), Gaps = 21/121 (17%)
Query: 41 AGLFGTPEQLKYLVDECHKAGLYVLLDVVHSHASKNVLDGL--------NEFDGTQACFF 92
A +G +LK L+ H G+ + D+V +H + D DG
Sbjct: 62 ASKYGNAAELKSLIGALHGKGVQAIADIVINHRCADYKDSRGIYCIFEGGTSDGRLDWGP 121
Query: 93 HDGPRGTHPLWDSRL-------------FNYSEIEVLRFLLSNLRWYLEEYQFDGFRFDG 139
H R D ++ V R L L W + FD +R D
Sbjct: 122 HMICRDDTKYSDGTANLDTGADFAAAPDIDHLNDRVQRELKEWLLWLKSDLGFDAWRLDF 181
Query: 140 V 140
Sbjct: 182 A 182
>d1e43a2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Chimera
(Bacillus amyloliquefaciens) and (Bacillus
licheniformis) [TaxId: 1390]}
Length = 393
Score = 42.6 bits (99), Expect = 2e-05
Identities = 22/132 (16%), Positives = 41/132 (31%), Gaps = 10/132 (7%)
Query: 44 FGTPEQLKYLVDECHKAGLYVLLDVVHSHASKN-------VLDGLNEFDGTQACFFHDGP 96
+GT +L+ + H + V DVV +H + ++ + +
Sbjct: 75 YGTKSELQDAIGSLHSRNVQVYGDVVLNHKAGADATEDVTAVEVNPANRNQETSEEYQIK 134
Query: 97 RGTHPLWDSRLFNYSEIEVLRFLLSNLRWYLEEYQFDGFRFDGVTSMLYHNHGCGEGFSG 156
T + R YS+ + + W F+F G +G
Sbjct: 135 AWTDFRFPGRGNTYSDFKWHWYHFDGADWDESRKISRIFKFRGEGK---AWDWEVSSENG 191
Query: 157 HYDEYFGLNVDT 168
+YD +VD
Sbjct: 192 NYDYLMYADVDY 203
Score = 29.9 bits (66), Expect = 0.27
Identities = 23/159 (14%), Positives = 40/159 (25%), Gaps = 24/159 (15%)
Query: 6 FGTPEQLKYLVDECHKAGL--------------FGTPEQLKYLVDECHKAGLFGTPEQLK 51
+GT +L+ + H + T + V+ ++ Q+K
Sbjct: 75 YGTKSELQDAIGSLHSRNVQVYGDVVLNHKAGADATEDVTAVEVNPANRNQETSEEYQIK 134
Query: 52 YLVDECHKAGLYVLLDVVHSHASKNVLDGLNEFDGTQACFFH----------DGPRGTHP 101
D D + D ++ F G +
Sbjct: 135 AWTDFRFPGRGNTYSDFKWHWYHFDGADWDESRKISRIFKFRGEGKAWDWEVSSENGNYD 194
Query: 102 LWDSRLFNYSEIEVLRFLLSNLRWYLEEYQFDGFRFDGV 140
+Y +V+ WY E DGFR D
Sbjct: 195 YLMYADVDYDHPDVVAETKKWGIWYANELSLDGFRIDAA 233
>d1ud2a2 c.1.8.1 (A:1-390) Bacterial alpha-amylase {Bacillus sp.,
ksm-k38 [TaxId: 1409]}
Length = 390
Score = 41.6 bits (96), Expect = 4e-05
Identities = 18/119 (15%), Positives = 38/119 (31%), Gaps = 5/119 (4%)
Query: 44 FGTPEQLKYLVDECHKAGLYVLLDVVHSHASKNVLDGLNEFDGTQACFFHDGPRGTHPLW 103
+GT QL+ + + V DVV +H G + + QA + R
Sbjct: 77 YGTKAQLERAIGSLKSNDINVYGDVVMNHKM-----GADFTEAVQAVQVNPTNRWQDISG 131
Query: 104 DSRLFNYSEIEVLRFLLSNLRWYLEEYQFDGFRFDGVTSMLYHNHGCGEGFSGHYDEYF 162
+ ++ + + + + F+G +D + ++ DE
Sbjct: 132 AYTIDAWTGFDFSGRNNAYSDFKWRWFHFNGVDWDQRYQENHIFRFANTNWNWRVDEEN 190
Score = 27.7 bits (60), Expect = 1.3
Identities = 20/157 (12%), Positives = 39/157 (24%), Gaps = 22/157 (14%)
Query: 6 FGTPEQLKYLVDECHKAGLF--------------GTPEQLKYLVDECHKAGLFGTPEQLK 51
+GT QL+ + + T V+ ++ +
Sbjct: 77 YGTKAQLERAIGSLKSNDINVYGDVVMNHKMGADFTEAVQAVQVNPTNRWQDISGAYTID 136
Query: 52 YLVDECHKAGLYVLLDVVHSHASKNVLDGLNEFDGTQACFFHDGPRGTHPLWDSRL---- 107
D N +D + F + ++
Sbjct: 137 AWTGFDFSGRNNAYSDFKWRWFHFNGVDWDQRYQENHIFRFANTNWNWRVDEENGNYDYL 196
Query: 108 ----FNYSEIEVLRFLLSNLRWYLEEYQFDGFRFDGV 140
++S EV L W+ +E DG+R D +
Sbjct: 197 LGSNIDFSHPEVQDELKDWGSWFTDELDLDGYRLDAI 233
>d1ua7a2 c.1.8.1 (A:4-347) Bacterial alpha-amylase {Bacillus
subtilis [TaxId: 1423]}
Length = 344
Score = 41.1 bits (95), Expect = 6e-05
Identities = 25/130 (19%), Positives = 43/130 (33%), Gaps = 11/130 (8%)
Query: 44 FGTPEQLKYLVDECHKAGLYVLLDVVHSHASKNVLDGLNEFDGTQACFFHDGPRG----- 98
GT ++ K + + G+ V++D V +H + + NE +
Sbjct: 71 LGTEQEFKEMCAAAEEYGIKVIVDAVINHTTFDYAAISNEVKSIPNWTHGNTQIKNWSDR 130
Query: 99 ----THPLWDSRLFNYSEIEVLRFLLSNLRWYLEEYQFDGFRFDGVTSM-LYHNHGCGEG 153
+ L +N +V +L L L DGFRFD + L + G
Sbjct: 131 WDVTQNSLLGLYDWNTQNTQVQSYLKRFLERAL-NDGADGFRFDAAKHIELPDDGSYGSQ 189
Query: 154 FSGHYDEYFG 163
F +
Sbjct: 190 FWPNITNTSA 199
>d1hx0a2 c.1.8.1 (A:1-403) Animal alpha-amylase {Pig (Sus scrofa)
[TaxId: 9823]}
Length = 403
Score = 40.7 bits (94), Expect = 8e-05
Identities = 22/192 (11%), Positives = 48/192 (25%), Gaps = 19/192 (9%)
Query: 44 FGTPEQLKYLVDECHKAGLYVLLDVVHSHASKNVLDGLNEFDGTQACFFHDGPRGTHPLW 103
G + + +V C+ G+ + +D V +H G GT + + P
Sbjct: 73 SGNENEFRDMVTRCNNVGVRIYVDAVINHMCG---SGAAAGTGTTCGSYCNPGNREFPAV 129
Query: 104 DSRLFNYSEIEVLRFLLSNLRWYLEEYQFDGF--------------RFDGVTSMLYHNHG 149
+++++ + + D R +
Sbjct: 130 PYSAWDFNDGKCKTASGGIESYNDPYQVRDCQLVGLLDLALEKDYVRSMIADYLNKLIDI 189
Query: 150 CGEGFSGHYDEYFGLNVDTDALIYLMVANKFLHDKYPEIITIAEDVSGMPASCRPVTEGG 209
GF ++ L L N E + + + G
Sbjct: 190 GVAGFRIDASKHMWPGDIKAVLDKLHNLNTNWFPAGSRPFIFQEVIDLGGEAIKSSEYFG 249
Query: 210 TG--FDYRLGRP 219
G +++ G
Sbjct: 250 NGRVTEFKYGAK 261
Score = 33.0 bits (74), Expect = 0.027
Identities = 21/139 (15%), Positives = 36/139 (25%), Gaps = 10/139 (7%)
Query: 6 FGTPEQLKYLVDECHKAGLFGTPEQ-LKYLVDECHKAGLFGTPEQLKYLVDECHKAGLYV 64
G + + +V C+ G+ + + ++ AG T + A Y
Sbjct: 73 SGNENEFRDMVTRCNNVGVRIYVDAVINHMCGSGAAAGTGTTCGSYCNPGNREFPAVPYS 132
Query: 65 LLDVVHSHASKNVLDGLNEFDGTQACFFHDGPRGTHPLWDSRLFNYSEIEVLRFLLSNLR 124
D + D Q L D + V + L
Sbjct: 133 AWDFNDGKCKTASGGIESYNDPYQVRDCQ-----LVGLLD---LALEKDYVRSMIADYLN 184
Query: 125 WYLEEYQFDGFRFDGVTSM 143
+ + GFR D M
Sbjct: 185 KLI-DIGVAGFRIDASKHM 202
>d1gjwa2 c.1.8.1 (A:1-572) Maltosyltransferase {Thermotoga maritima
[TaxId: 2336]}
Length = 572
Score = 40.4 bits (93), Expect = 1e-04
Identities = 22/173 (12%), Positives = 46/173 (26%), Gaps = 30/173 (17%)
Query: 44 FGTPEQLKYLVDECHKAGLYVLLDVVHSHASKN---VLDGLNEFDGTQACFFHDGPRGTH 100
F E+ K V+ CH G+ V+LD + A+++ + + + F + D
Sbjct: 178 FKVDEEFKAFVEACHILGIRVILDFIPRTAARDSDLIREHPDWFYWIKVEELADYTPPRA 237
Query: 101 PLWDSRLF-------------------------NYSEIEVLRFLLSNLRWYLEEYQFDGF 135
++ N + + + L E F
Sbjct: 238 EELPFKVPDEDELEIIYNKENVKRHLKKFTLPPNLIDPQKWEKIKREEGNIL-ELIVKEF 296
Query: 136 RFDGVTSMLYHNHGCGEGFSGHYDEYFGLNVDTDALIYLMVANKFLHDKYPEI 188
+ + L+ +A + N+ + Y I
Sbjct: 297 GIITPPGFSDLINDPQPTWDDVTFLRLYLD-HPEASKRFLDPNQPPYVLYDVI 348
>d2bhua3 c.1.8.1 (A:111-530) Glycosyltrehalose trehalohydrolase,
central domain {Deinococcus radiodurans [TaxId: 1299]}
Length = 420
Score = 35.9 bits (81), Expect = 0.003
Identities = 40/170 (23%), Positives = 61/170 (35%), Gaps = 30/170 (17%)
Query: 44 FGTPEQLKYLVDECHKAGLYVLLDVVHSHASKNVLDGLNEFDGTQACFFHDGPRGTHPLW 103
+G PE L LVD H+ GL V LDVV++H + N +F D +
Sbjct: 79 YGRPEDLMALVDAAHRLGLGVFLDVVYNHFGPS----GNYLSSYAPSYFTDRFSSAWGMG 134
Query: 104 DSRLFNYSEIEVLRFLLSNLRWYLEEYQFDGFRFDGVTSMLYHNHGCGEGFSGHYDEYFG 163
+Y+E + R++ N R +L +Y FDG R D M +
Sbjct: 135 ----LDYAEPHMRRYVTGNARMWLRDYHFDGLRLDATPYMTDDSETH------------- 177
Query: 164 LNVDTDALIYLMVANKFLHDKYPEIITIAEDVSGMPASCRPVTEGGTGFD 213
L + +H+ + +AED +P G D
Sbjct: 178 ---------ILTELAQEIHELGGTHLLLAEDHRNLPDLVTVNHLDGIWTD 218
>d1wzla3 c.1.8.1 (A:121-502) Maltogenic amylase, central domain
{Thermoactinomyces vulgaris, TVAII [TaxId: 2026]}
Length = 382
Score = 35.8 bits (81), Expect = 0.004
Identities = 27/144 (18%), Positives = 45/144 (31%), Gaps = 17/144 (11%)
Query: 35 VDECHKAGLFGTPEQLKYLVDECHKAGLYVLLDVVHS------HASKNVLDGLNEFDGTQ 88
D FG + LVDE H+ G+ ++LD V + A ++VL +
Sbjct: 87 ADYLAIDPQFGDLPTFRRLVDEAHRRGIKIILDAVFNHAGDQFFAFRDVLQKGEQSRYKD 146
Query: 89 ACFFHDGPRGTHPLWDSRL----------FNYSEIEVLRFLLSNLRWYLEEYQFDGFRFD 138
F D P + EV +L R+++ E DG+R D
Sbjct: 147 WFFIEDFPVSKTSRTNYETFAVQVPAMPKLRTENPEVKEYLFDVARFWM-EQGIDGWRLD 205
Query: 139 GVTSMLYHNHGCGEGFSGHYDEYF 162
+ + +
Sbjct: 206 VANEVDHAFWREFRRLVKSLNPDA 229
>d1wzaa2 c.1.8.1 (A:28-436) Bacterial alpha-amylase {Halothermothrix
orenii [TaxId: 31909]}
Length = 409
Score = 35.8 bits (81), Expect = 0.004
Identities = 24/150 (16%), Positives = 47/150 (31%), Gaps = 30/150 (20%)
Query: 44 FGTPEQLKYLVDECHKAGLYVLLDVVHSHASKN--------------------------V 77
+GT E LV+ H+ G+ V++D+ +H S+
Sbjct: 78 YGTLEDFHKLVEAAHQRGIKVIIDLPINHTSERHPWFLKASRDKNSEYRDYYVWAGPDTD 137
Query: 78 LDGLNEFDGTQACFFHDGPRGTHPLWDSRLFNYSEIEVLRFLLSNLRWYLEE----YQFD 133
G + G + NY+ EV ++ +++L++ ++ D
Sbjct: 138 TKETKLDGGRVWHYSPTGMYYGYFWSGMPDLNYNNPEVQEKVIGIAKYWLKQGVDGFRLD 197
Query: 134 GFRFDGVTSMLYHNHGCGEGFSGHYDEYFG 163
G + N E F +E
Sbjct: 198 GAMHIFPPAQYDKNFTWWEKFRQEIEEVKP 227
>d1lwha2 c.1.8.1 (A:1-391) 4-alpha-glucanotransferase {Thermotoga
maritima [TaxId: 2336]}
Length = 391
Score = 34.6 bits (78), Expect = 0.007
Identities = 24/145 (16%), Positives = 47/145 (32%), Gaps = 26/145 (17%)
Query: 44 FGTPEQLKYLVDECHKAGLYVLLDVVHSHAS-------------------------KNVL 78
+G+ + K +++ H +G+ V+LD+ H + L
Sbjct: 66 YGSEREFKEMIEAFHDSGIKVVLDLPIHHTGFLHTWFQKALKGDPHYRDYYVWANKETDL 125
Query: 79 DGLNEFDGTQACFFHDGPRGTHPLWDSRLFNYSEI-EVLRFLLSNLRWYLEEYQFDGFRF 137
D E+DG + + R L+ + + + + L +L + DGFRF
Sbjct: 126 DERREWDGEKIWHPLEDGRFYRGLFGPFSPDLNYDNPQVFDEMKRLVLHLLDMGVDGFRF 185
Query: 138 DGVTSMLYHNHGCGEGFSGHYDEYF 162
D M + +
Sbjct: 186 DAAKHMRDTIEQNVRFWKYFLSDLK 210
>d1h3ga3 c.1.8.1 (A:96-517) Cyclomaltodextrinase, central domain
{Flavobacterium sp. 92 [TaxId: 197856]}
Length = 422
Score = 33.6 bits (75), Expect = 0.016
Identities = 23/125 (18%), Positives = 35/125 (28%), Gaps = 22/125 (17%)
Query: 46 TPEQLKYLVDECHKAGLYVLLDVVHSHASKNV--------LDGLNEFDGTQACFFHDGPR 97
+ E L E K G+ ++ DVV SH K+ D +N H
Sbjct: 102 SNEDFVRLSTEARKRGMGLIQDVVLSHIGKHHWWMKDLPTPDWINYGGKFVPTQHHRVAV 161
Query: 98 GTHPLWDSRL--------------FNYSEIEVLRFLLSNLRWYLEEYQFDGFRFDGVTSM 143
+ N + V +L+ N W++E G R D
Sbjct: 162 QDPYAAQADSENFTKGWFVEGMPDLNQTNPLVANYLIQNNIWWIEYAGLSGLRIDTYGYS 221
Query: 144 LYHNH 148
Sbjct: 222 DGAFL 226
>d1rh9a1 c.1.8.3 (A:30-399) Beta-mannanase {Tomato (Lycopersicon
esculentum) [TaxId: 4081]}
Length = 370
Score = 32.0 bits (71), Expect = 0.059
Identities = 11/89 (12%), Positives = 31/89 (34%), Gaps = 1/89 (1%)
Query: 48 EQLKYLVDECHKAGLYVLLDV-VHSHASKNVLDGLNEFDGTQACFFHDGPRGTHPLWDSR 106
+ L +++ E K G+++++ + + A + D T+P+
Sbjct: 82 QGLDFVISEAKKYGIHLIMSLVNNWDAFGGKKQYVEWAVQRGQKLTSDDDFFTNPMVKGF 141
Query: 107 LFNYSEIEVLRFLLSNLRWYLEEYQFDGF 135
N ++ + R Y ++ +
Sbjct: 142 YKNNVKVVLTRVNTITKVAYKDDPTILSW 170
>d2aama1 c.1.8.15 (A:28-312) Hypothetical protein TM1410 {Thermotoga
maritima [TaxId: 2336]}
Length = 285
Score = 30.4 bits (68), Expect = 0.18
Identities = 13/96 (13%), Positives = 31/96 (32%), Gaps = 11/96 (11%)
Query: 98 GTHPLW-DSRLFNYSEIEVLRFLLSNLRWYLEEYQFDGFRFDGVTSMLYHNHGCGEGFSG 156
P W + Y E + S L + + F G D + S Y
Sbjct: 89 EEDPAWPGNYFVKYWYNEWKEIVFSYLD-RVIDQGFKGIYLDRIDSFEYWAQEGVISRRS 147
Query: 157 HYDEYFGLNVDTDALIYLMVANKFLHDKYPEIITIA 192
+ + ++ + +++ ++ P+++ I
Sbjct: 148 AARKM------INFVLEIA---EYVRERKPDMLIIP 174
>d1kwga2 c.1.8.1 (A:1-393) A4 beta-galactosidase {Thermus
thermophilus [TaxId: 274]}
Length = 393
Score = 29.3 bits (64), Expect = 0.37
Identities = 21/171 (12%), Positives = 35/171 (20%), Gaps = 9/171 (5%)
Query: 48 EQLKYLVDECHKAGLYVLLDVVHSHASKNVLDGLNEFDGTQACFFHDGPRGTHPLWDSRL 107
L + GL V+L + K ++D E G + R
Sbjct: 51 GWLDEAIATLAAEGLKVVLGTPTATPPKWLVDRYPE-------ILPVDREGRRRRFGGRR 103
Query: 108 FNYSEIEVLRFLLSNLRWYLEEYQFDGFRFDGVTSMLYHNHGCGEGFSGHYDEYFGLNVD 167
V R + L E G + +GC + +
Sbjct: 104 HYCFSSPVYREEARRIVTLLAER--YGGLEAVAGFQTDNEYGCHDTVRCYCPRCQEAFRG 161
Query: 168 TDALIYLMVANKFLHDKYPEIITIAEDVSGMPASCRPVTEGGTGFDYRLGR 218
Y + + + V E R
Sbjct: 162 WLEARYGTIEALNEAWGTAFWSQRYRSFAEVELPHLTVAEPNPSHLLDYYR 212
>d1ywsa1 g.41.17.1 (A:1-82) Diphthamide biosynthesis protein 3, DPH3
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 82
Score = 27.0 bits (60), Expect = 0.67
Identities = 6/28 (21%), Positives = 12/28 (42%)
Query: 128 EEYQFDGFRFDGVTSMLYHNHGCGEGFS 155
+E + + F+ M + CG+ F
Sbjct: 5 DEIEIEDMTFEPENQMFTYPCPCGDRFQ 32
>d1ji1a3 c.1.8.1 (A:123-554) Maltogenic amylase, central domain
{Thermoactinomyces vulgaris, TVAI [TaxId: 2026]}
Length = 432
Score = 28.2 bits (61), Expect = 0.91
Identities = 23/197 (11%), Positives = 50/197 (25%), Gaps = 12/197 (6%)
Query: 44 FGTPEQLKYLVDECH----KAGLYVLLDVVHSHASK--------NVLDGLNEFDGTQACF 91
FG L+ L+++ H Y++LD V +H N ++ + +
Sbjct: 113 FGDNSTLQTLINDIHSTANGPKGYLILDGVFNHTGDSHPWFDKYNNFSSQGAYESQSSPW 172
Query: 92 FHDGPRGTHPLWDSRLFNYSEIEVLRFLLSNLRWYLEEYQFDGFRFDGVTSMLYHNHGCG 151
++ T P + ++ + L + S Y + Y G
Sbjct: 173 YNYYTFYTWPDSYASFLGFNSLPKLNYGNSGSAVRGVIYNNSNSVAKTYLNPPYSVDGWR 232
Query: 152 EGFSGHYDEYFGLNVDTDALIYLMVANKFLHDKYPEIITIAEDVSGMPASCRPVTEGGTG 211
+ + D D + I E +
Sbjct: 233 LDAAQYVDANGNNGSDVTNHQIWSEFRNAVKGVNSNAAIIGEYWGNANPWTAQGNQWDAA 292
Query: 212 FDYRLGRPGLDKSFYGN 228
++ + + G
Sbjct: 293 TNFDGFTQPVSEWITGK 309
>d1qhoa4 c.1.8.1 (A:1-407) Cyclodextrin glycosyltransferase
{Bacillus stearothermophilus, maltogenic alpha-amylase
[TaxId: 1422]}
Length = 407
Score = 27.7 bits (60), Expect = 1.2
Identities = 21/174 (12%), Positives = 45/174 (25%), Gaps = 3/174 (1%)
Query: 44 FGTPEQLKYLVDECHKAGLYVLLDVVHSHASKNVLDGLNEFDGTQACFFHDGPRGTHPLW 103
FG LV++ H+ G+ V++D V +H++ + +G
Sbjct: 104 FGNWTTFDTLVNDAHQNGIKVIVDFVPNHSTPFKANDSTFAEGGALYNNGTYMGNYFDDA 163
Query: 104 DSRLFNYSEIEVLRFLLSNLRWYLEEYQFDGFRFDGVTSMLYHNHGCGEGFSGHYDEYFG 163
F+++ +W D +
Sbjct: 164 TKGYFHHNGDISNWDDRYEAQWKNFTDPAGFSLADLSQENGTIAQYLTDAAVQLVAHGAD 223
Query: 164 LNVDTDALIYLMVANKFLHDK---YPEIITIAEDVSGMPASCRPVTEGGTGFDY 214
+ +K L DK +I + E P + + + +
Sbjct: 224 GLRIDAVKHFNSGFSKSLADKLYQKKDIFLVGEWYGDDPGTANHLEKVRYANNS 277
>d1wgea1 g.41.17.1 (A:8-77) DelGEF-interacting protein 1, DelGIP1
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 70
Score = 25.8 bits (57), Expect = 1.3
Identities = 6/30 (20%), Positives = 17/30 (56%)
Query: 126 YLEEYQFDGFRFDGVTSMLYHNHGCGEGFS 155
+ +E + + F++D + ++ CG+ F+
Sbjct: 4 FHDEVEIEDFQYDEDSETYFYPCPCGDNFA 33
>d2c0ha1 c.1.8.3 (A:18-367) endo-1,4-beta-mannosidase {Blue mussel
(Mytilus edulis) [TaxId: 6550]}
Length = 350
Score = 27.4 bits (59), Expect = 1.7
Identities = 2/44 (4%), Positives = 12/44 (27%)
Query: 48 EQLKYLVDECHKAGLYVLLDVVHSHASKNVLDGLNEFDGTQACF 91
++ + + + + + + ++ LN
Sbjct: 88 SDMRAYLHAAQRHNILIFFTLWNGAVKQSTHYRLNGLMVDTRKL 131
>d1foba_ c.1.8.3 (A:) Beta-1,4-galactanase {Fungus (Aspergillus
aculeatus) [TaxId: 5053]}
Length = 334
Score = 27.0 bits (59), Expect = 2.0
Identities = 6/25 (24%), Positives = 10/25 (40%)
Query: 48 EQLKYLVDECHKAGLYVLLDVVHSH 72
+ L AG+ + LD+ S
Sbjct: 60 DYNLELAKRVKAAGMSLYLDLHLSD 84
>d1twfb_ e.29.1.1 (B:) RBP2 {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 1207
Score = 27.2 bits (59), Expect = 2.2
Identities = 12/62 (19%), Positives = 16/62 (25%), Gaps = 6/62 (9%)
Query: 13 KYLVDECHKAGLFGTPEQLKYLVDECHKAGL------FGTPEQLKYLVDECHKAGLYVLL 66
+ V C GL +L + EC P K L E + L
Sbjct: 1140 AFRVHICGICGLMTVIAKLNHNQFECKGCDNKIDIYQIHIPYAAKLLFQELMAMNITPRL 1199
Query: 67 DV 68
Sbjct: 1200 YT 1201
>d1vkfa_ c.1.29.1 (A:) Glycerol uptake operon
antiterminator-related protein TM1436 {Thermotoga
maritima [TaxId: 2336]}
Length = 172
Score = 26.5 bits (59), Expect = 2.4
Identities = 6/26 (23%), Positives = 10/26 (38%)
Query: 43 LFGTPEQLKYLVDECHKAGLYVLLDV 68
L LK+ + G V +D+
Sbjct: 26 LKSDILNLKFHLKILKDRGKTVFVDM 51
>d1dysa_ c.6.1.1 (A:) Cellobiohydrolase II (Cel6) {Humicola
insolens, Cel6b [TaxId: 34413]}
Length = 345
Score = 26.1 bits (57), Expect = 3.8
Identities = 7/47 (14%), Positives = 18/47 (38%), Gaps = 3/47 (6%)
Query: 28 PEQLKYLVDECHKAGLFGTPEQ---LKYLVDECHKAGLYVLLDVVHS 71
P+ + +V Q + Y + + + +++ LDV +
Sbjct: 136 PDAIGNMVTGTSAFCRNARGPQQEAIGYAISQLQASHIHLYLDVANG 182
>d1g01a_ c.1.8.3 (A:) Alkaline cellulase K catalytic domain
{Bacillus sp. [TaxId: 1409]}
Length = 357
Score = 26.4 bits (57), Expect = 4.0
Identities = 10/66 (15%), Positives = 25/66 (37%), Gaps = 3/66 (4%)
Query: 48 EQLKYLVDECHKAGLYVLLDVVHSHA---SKNVLDGLNEFDGTQACFFHDGPRGTHPLWD 104
+ + ++ + +YV++D +V G +F A + D P+ + +W+
Sbjct: 88 DLVYEGIELAFEHDMYVIVDWHVHAPGDPRADVYSGAYDFFEEIADHYKDHPKNHYIIWE 147
Query: 105 SRLFNY 110
Sbjct: 148 LANEPS 153
>d1ax4a_ c.67.1.2 (A:) Tryptophan indol-lyase (tryptophanase)
{Proteus vulgaris [TaxId: 585]}
Length = 465
Score = 26.1 bits (56), Expect = 4.1
Identities = 10/67 (14%), Positives = 23/67 (34%), Gaps = 4/67 (5%)
Query: 4 NGFGTPEQLKYLVDECHKAGLFGTPEQLKYLVDECHKAGLFGTPEQLKYLVDECHKAGLY 63
G ++LK + + + V G + LK + + + G++
Sbjct: 163 KGDFDIKKLKENIAQHGA----DNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIF 218
Query: 64 VLLDVVH 70
V++D
Sbjct: 219 VVMDSAR 225
>d1x7fa2 c.1.8.12 (A:1-244) Outer surface protein, N-terminal
domain {Bacillus cereus [TaxId: 1396]}
Length = 244
Score = 25.8 bits (57), Expect = 4.7
Identities = 8/37 (21%), Positives = 15/37 (40%), Gaps = 5/37 (13%)
Query: 46 TPEQLKYLVDECHKAGLYVLLDVVHSHASKNVLDGLN 82
+ K +++ + V+LDV + V D L
Sbjct: 48 IVAEFKEIINHAKDNNMEVILDV-----APAVFDQLG 79
>d1hjsa_ c.1.8.3 (A:) Beta-1,4-galactanase {Thielavia
heterothallica, aka Myceliophthora thermophila [TaxId:
78579]}
Length = 332
Score = 26.0 bits (56), Expect = 5.0
Identities = 6/24 (25%), Positives = 10/24 (41%)
Query: 48 EQLKYLVDECHKAGLYVLLDVVHS 71
+ + AGL V +D +S
Sbjct: 60 DYNIAIAKRAKAAGLGVYIDFHYS 83
>d1c7ga_ c.67.1.2 (A:) Tyrosine phenol-lyase {Erwinia herbicola
[TaxId: 549]}
Length = 456
Score = 25.9 bits (56), Expect = 5.2
Identities = 7/65 (10%), Positives = 17/65 (26%), Gaps = 4/65 (6%)
Query: 8 TPEQLKYLVDECHKAGLFGTPEQLKYLVDECHKAGLFGTPEQLKYLVDECHKAGLYVLLD 67
+L L+ E + V G + ++ + + G+ + D
Sbjct: 159 DLNKLATLIKEKGAE----NIAYICLAVTVNLAGGQPVSMANMRAVHEMASTYGIKIFYD 214
Query: 68 VVHSH 72
Sbjct: 215 ATRCV 219
>d1r7aa2 c.1.8.1 (A:1-434) Sucrose phosphorylase {Bifidobacterium
adolescentis [TaxId: 1680]}
Length = 434
Score = 25.5 bits (54), Expect = 6.6
Identities = 6/96 (6%), Positives = 25/96 (26%), Gaps = 5/96 (5%)
Query: 44 FGTPEQLKYLVDECHKAGLYVLLDVVHSHASKNVLDGLNEFDGTQACFFHDGPRGTHPLW 103
G+ + + L +++D + +H S + + ++ ++
Sbjct: 65 LGSWDDVAELS-----KTHNIMVDAIVNHMSWESKQFQDVLAKGEESEYYPMFLTMSSVF 119
Query: 104 DSRLFNYSEIEVLRFLLSNLRWYLEEYQFDGFRFDG 139
+ + R + + +
Sbjct: 120 PNGATEEDLAGIYRPRPGLPFTHYKFAGKTRLVWVS 155
>d1h4pa_ c.1.8.3 (A:) Exo-beta-(1,3)-glucanase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 408
Score = 25.6 bits (55), Expect = 6.8
Identities = 13/70 (18%), Positives = 24/70 (34%), Gaps = 14/70 (20%)
Query: 50 LKYLVDECHKAGLYVLLDVVHSHASKNVLDGLNEFDGTQACFFHDGPRGTHPLWDSRLFN 109
L + L V +D+ H G+Q F + G R ++ +
Sbjct: 116 LDQAIGWARNNSLKVWVDL---HG----------AAGSQNGFDNSGLRDSYKFLEDSNLA 162
Query: 110 YSEIEVLRFL 119
+ I VL ++
Sbjct: 163 VT-INVLNYI 171
>d2bw3a2 c.55.3.12 (A:163-609) Transposase Hermes, catalytic domain
{House fly (Musca domestica) [TaxId: 7370]}
Length = 447
Score = 25.4 bits (54), Expect = 7.1
Identities = 10/43 (23%), Positives = 18/43 (41%), Gaps = 4/43 (9%)
Query: 159 DEYFGLNVDTDALIYLMVANKFLHDKYPEIITIAEDVSGMPAS 201
E L+ D + + KYP++ +A + +PAS
Sbjct: 367 KEIVILSEDFKVMEWW----NLNSKKYPKLSKLALSLLSIPAS 405
>d1tvna1 c.1.8.3 (A:1-293) Endoglucanase Cel5a {Pseudoalteromonas
haloplanktis [TaxId: 228]}
Length = 293
Score = 25.2 bits (54), Expect = 8.8
Identities = 7/52 (13%), Positives = 18/52 (34%), Gaps = 4/52 (7%)
Query: 25 FGTPEQLKYLVDECHKAGLFGTPEQLKYLVDECHKAGLYVLLDVVHSHASKN 76
G ++ + + +L +V+ +YV++D A +
Sbjct: 60 IGHGTSTGGSLNFDWEGNM----SRLDTVVNAAIAEDMYVIIDFHSHEAHTD 107
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.322 0.143 0.456
Gapped
Lambda K H
0.267 0.0673 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 991,590
Number of extensions: 48680
Number of successful extensions: 221
Number of sequences better than 10.0: 1
Number of HSP's gapped: 199
Number of HSP's successfully gapped: 65
Length of query: 237
Length of database: 2,407,596
Length adjustment: 83
Effective length of query: 154
Effective length of database: 1,268,006
Effective search space: 195272924
Effective search space used: 195272924
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 51 (23.5 bits)