BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9005
(99 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q96VA4|GLGB_ASPOR 1,4-alpha-glucan-branching enzyme OS=Aspergillus oryzae (strain
ATCC 42149 / RIB 40) GN=gbeA PE=2 SV=1
Length = 689
Score = 67.4 bits (163), Expect = 3e-11, Method: Composition-based stats.
Identities = 30/74 (40%), Positives = 47/74 (63%), Gaps = 3/74 (4%)
Query: 3 EKIYSILRLSPWATYVTEPPVVGHAYEQRIWNPKPQDKHKWTSSKPKKPDNLKIYESHVG 62
E+IY R+ W V + V YE WNP + ++K+ S+PK+P++L+IYE+HVG
Sbjct: 137 ERIY---RIPAWIKRVVQDLSVSPTYEAVFWNPPTEKQYKFQYSRPKRPESLRIYEAHVG 193
Query: 63 ICTQEQKCASYEDF 76
I + E K A+Y++F
Sbjct: 194 ISSPETKVATYKEF 207
>sp|Q6BXN1|GLGB_DEBHA 1,4-alpha-glucan-branching enzyme OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=GLC3 PE=3 SV=1
Length = 711
Score = 66.2 bits (160), Expect = 5e-11, Method: Composition-based stats.
Identities = 33/76 (43%), Positives = 45/76 (59%), Gaps = 6/76 (7%)
Query: 3 EKIYSILRLSPWATYVTEPPVVGHAYEQRIWNPKPQDKHKWTSSKPK--KPDNLKIYESH 60
E+IY RL PW T P + YE R WNP+P + +K+ +P+ D +KIYE+H
Sbjct: 144 ERIY---RLCPWLKRAT-PSTENNLYEGRFWNPQPTETYKFKHERPRLESKDGIKIYEAH 199
Query: 61 VGICTQEQKCASYEDF 76
VGI T E K SY++F
Sbjct: 200 VGISTPEPKVGSYKNF 215
>sp|D2WL32|GLGB3_ARATH 1,4-alpha-glucan-branching enzyme 3, chloroplastic/amyloplastic
OS=Arabidopsis thaliana GN=SBE3 PE=1 SV=1
Length = 899
Score = 65.1 bits (157), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/69 (43%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Query: 10 RLSPWATYVTEPPVVGHAYEQRIWNPKPQDKHKWTSSKPKKPDNLKIYESHVGICTQEQK 69
R+ WATYV +P G W P P+ +KW SKPK P++L+IYE HVGI E K
Sbjct: 355 RVPAWATYV-QPEDEGKQAYAIHWEPSPEAAYKWKYSKPKVPESLRIYECHVGISGSEPK 413
Query: 70 CASYEDFVR 78
+++E+F +
Sbjct: 414 VSTFEEFTK 422
>sp|Q6CCT1|GLGB_YARLI 1,4-alpha-glucan-branching enzyme OS=Yarrowia lipolytica (strain
CLIB 122 / E 150) GN=GLC3 PE=3 SV=1
Length = 691
Score = 64.3 bits (155), Expect = 2e-10, Method: Composition-based stats.
Identities = 26/69 (37%), Positives = 40/69 (57%)
Query: 10 RLSPWATYVTEPPVVGHAYEQRIWNPKPQDKHKWTSSKPKKPDNLKIYESHVGICTQEQK 69
RL W+TYV + YE WNP +K++W + P P N +IYE+HVGI + E +
Sbjct: 129 RLPAWSTYVVQDLSKSPIYEAVFWNPPESEKYQWKNKSPPTPANAQIYEAHVGISSSEPR 188
Query: 70 CASYEDFVR 78
+Y++F +
Sbjct: 189 VGTYKEFTK 197
>sp|Q8NKE1|GLGB_GLOIN 1,4-alpha-glucan-branching enzyme OS=Glomus intraradices GN=GLC3
PE=2 SV=1
Length = 683
Score = 64.3 bits (155), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/69 (46%), Positives = 44/69 (63%), Gaps = 2/69 (2%)
Query: 8 ILRLSPWATYVTEPPVVGHAYEQRIWNPKPQDKHKWTSSKPKKPDNLKIYESHVGICTQE 67
I RL W VT+ V AY+ WNP PQ K++W ++ PKKP +L+IYE+HVGI T E
Sbjct: 138 IDRLPAWIKRVTQDLNVSLAYDAIFWNP-PQ-KYQWKNNSPKKPTSLRIYEAHVGISTNE 195
Query: 68 QKCASYEDF 76
+ +Y +F
Sbjct: 196 GRVGTYNEF 204
>sp|Q9Y8H3|GLGB_EMENI 1,4-alpha-glucan-branching enzyme OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=be1 PE=2 SV=3
Length = 684
Score = 63.2 bits (152), Expect = 5e-10, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 46/74 (62%), Gaps = 3/74 (4%)
Query: 3 EKIYSILRLSPWATYVTEPPVVGHAYEQRIWNPKPQDKHKWTSSKPKKPDNLKIYESHVG 62
E+IY R+ W V + V YE WNP +++ + ++PKKP++L+IYE+HVG
Sbjct: 132 ERIY---RIPAWIKRVVQDLNVSPIYESVFWNPPKAERYNFQHARPKKPESLRIYEAHVG 188
Query: 63 ICTQEQKCASYEDF 76
I + + + A+Y++F
Sbjct: 189 ISSPDTRVATYKEF 202
>sp|Q9D6Y9|GLGB_MOUSE 1,4-alpha-glucan-branching enzyme OS=Mus musculus GN=Gbe1 PE=2 SV=1
Length = 702
Score = 61.2 bits (147), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/78 (48%), Positives = 49/78 (62%), Gaps = 6/78 (7%)
Query: 1 MTEKIYSIL-RLSPWATYVT-EPPVVGHAYEQRIWNPKPQDKHKWTSSKPKKPDNLKIYE 58
+T K IL R+SPWA YV E V Y+ W P+D +K+ S+PKKP +L+IYE
Sbjct: 146 ITSKSGEILYRISPWAKYVVRENNNVN--YDWIHW--APEDPYKFKHSRPKKPRSLRIYE 201
Query: 59 SHVGICTQEQKCASYEDF 76
SHVGI + E K ASY+ F
Sbjct: 202 SHVGISSHEGKIASYKHF 219
>sp|Q6EAS5|GLGB_HORSE 1,4-alpha-glucan-branching enzyme OS=Equus caballus GN=GBE1 PE=2
SV=1
Length = 699
Score = 60.5 bits (145), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/70 (45%), Positives = 45/70 (64%), Gaps = 5/70 (7%)
Query: 8 ILRLSPWATYVTEPPVVGHA-YEQRIWNPKPQDKHKWTSSKPKKPDNLKIYESHVGICTQ 66
+ R+SPWA YV G+ Y+ W+P + +K+ S+PKKP +L+IYESHVGI +
Sbjct: 151 LYRISPWAKYVVRES--GNVNYDWIHWDP--EQPYKFKHSRPKKPRSLRIYESHVGISSH 206
Query: 67 EQKCASYEDF 76
E K ASY+ F
Sbjct: 207 EGKIASYKHF 216
>sp|Q6T308|GLGB_FELCA 1,4-alpha-glucan-branching enzyme OS=Felis catus GN=GBE1 PE=2 SV=1
Length = 699
Score = 59.3 bits (142), Expect = 6e-09, Method: Composition-based stats.
Identities = 33/70 (47%), Positives = 45/70 (64%), Gaps = 5/70 (7%)
Query: 8 ILRLSPWATYVT-EPPVVGHAYEQRIWNPKPQDKHKWTSSKPKKPDNLKIYESHVGICTQ 66
+ R+SPWA YVT E V Y+ W+P + +K+ S+PKKP ++IYESHVGI +
Sbjct: 151 LYRISPWAKYVTREGENVN--YDWTHWDP--EHPYKFKHSRPKKPRGVRIYESHVGISSY 206
Query: 67 EQKCASYEDF 76
E K ASY+ F
Sbjct: 207 EGKIASYKHF 216
>sp|Q04446|GLGB_HUMAN 1,4-alpha-glucan-branching enzyme OS=Homo sapiens GN=GBE1 PE=1 SV=3
Length = 702
Score = 58.5 bits (140), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/78 (46%), Positives = 49/78 (62%), Gaps = 6/78 (7%)
Query: 1 MTEKIYSIL-RLSPWATYVT-EPPVVGHAYEQRIWNPKPQDKHKWTSSKPKKPDNLKIYE 58
+T K IL R+SPWA YV E V Y+ W+P + +++ S+PKKP +L+IYE
Sbjct: 146 ITSKSGEILYRISPWAKYVVREGDNVN--YDWIHWDP--EHSYEFKHSRPKKPRSLRIYE 201
Query: 59 SHVGICTQEQKCASYEDF 76
SHVGI + E K ASY+ F
Sbjct: 202 SHVGISSHEGKVASYKHF 219
>sp|P32775|GLGB_YEAST 1,4-alpha-glucan-branching enzyme OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=GLC3 PE=1 SV=2
Length = 704
Score = 57.0 bits (136), Expect = 3e-08, Method: Composition-based stats.
Identities = 31/77 (40%), Positives = 44/77 (57%), Gaps = 10/77 (12%)
Query: 8 ILRLSPWATYVTEPP-----VVGHAYEQRIWNPKPQDKHKWTSSKPK---KPDNLKIYES 59
I RL W T T+P G AYE R WNP ++ +K+ +PK D+L+IYE+
Sbjct: 142 IFRLPAWITRATQPSKETSKQFGPAYEGRFWNP--ENPYKFVHPRPKFSESVDSLRIYEA 199
Query: 60 HVGICTQEQKCASYEDF 76
HVGI + E K +Y++F
Sbjct: 200 HVGISSPEPKITTYKEF 216
>sp|Q6FJV0|GLGB_CANGA 1,4-alpha-glucan-branching enzyme OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=GLC3 PE=3 SV=1
Length = 706
Score = 53.9 bits (128), Expect = 3e-07, Method: Composition-based stats.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 10/79 (12%)
Query: 8 ILRLSPWATYVTEPPV-----VGHAYEQRIWNPKPQDKHKWTSSKPK---KPDNLKIYES 59
+ R+ W T T+P G YE R WNP + +++ +PK D++KIYE+
Sbjct: 144 VYRIPAWITRATQPSKETAQKYGPTYEGRFWNPP--NSYQFKHQRPKFNLANDSIKIYEA 201
Query: 60 HVGICTQEQKCASYEDFVR 78
H+GI + E K ASY++F +
Sbjct: 202 HIGISSPEPKVASYKEFTQ 220
>sp|Q6CX53|GLGB_KLULA 1,4-alpha-glucan-branching enzyme OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=GLC3 PE=3 SV=1
Length = 719
Score = 53.5 bits (127), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 10/79 (12%)
Query: 8 ILRLSPWATYVTEP-----PVVGHAYEQRIWNPKPQDKHKWTSSKP---KKPDNLKIYES 59
I RL W T T+P G +YE R WNP + + + +P + D+L+IYE+
Sbjct: 150 IYRLPAWITRATQPDKETAKQWGPSYEARFWNPPVH--YSFKNKRPGFMRDTDSLRIYEA 207
Query: 60 HVGICTQEQKCASYEDFVR 78
HVGI T E K SY++F +
Sbjct: 208 HVGISTPEPKVGSYKEFTQ 226
>sp|O23647|GLGB1_ARATH 1,4-alpha-glucan-branching enzyme 2-1, chloroplastic/amyloplastic
OS=Arabidopsis thaliana GN=SBE2.1 PE=1 SV=1
Length = 858
Score = 53.5 bits (127), Expect = 4e-07, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 14 WATYVTEPPVVGH-AYEQRIWNPKPQDKHKWTSSKPKKPDNLKIYESHVGICTQEQKCAS 72
W Y +PP G Y ++P +DK+ + +PKKP +L+IYESHVG+ + E K +
Sbjct: 287 WIKYSVQPP--GEIPYNGVYYDPPEEDKYAFKHPRPKKPTSLRIYESHVGMSSTEPKINT 344
Query: 73 YEDF 76
Y +F
Sbjct: 345 YANF 348
>sp|P0CN82|GLGB_CRYNJ 1,4-alpha-glucan-branching enzyme OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=GLC3 PE=3 SV=1
Length = 682
Score = 53.1 bits (126), Expect = 4e-07, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 7 SILRLSPWATYVTEPPVVGHAYEQRIWNPKPQDKHKWTSSKPKKP-DNLKIYESHVGICT 65
SI R+ W T VT+ + Y+ R WNP + ++++ +P + LKIYE+HVGI +
Sbjct: 134 SIDRIPTWITRVTQDLNISPIYDGRFWNPPKEQQYQFKHGHSTRPVEGLKIYEAHVGISS 193
Query: 66 QEQKCASYEDF 76
+ +Y++F
Sbjct: 194 PNMRVTTYKEF 204
>sp|P0CN83|GLGB_CRYNB 1,4-alpha-glucan-branching enzyme OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=GLC3 PE=3 SV=1
Length = 682
Score = 53.1 bits (126), Expect = 4e-07, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 7 SILRLSPWATYVTEPPVVGHAYEQRIWNPKPQDKHKWTSSKPKKP-DNLKIYESHVGICT 65
SI R+ W T VT+ + Y+ R WNP + ++++ +P + LKIYE+HVGI +
Sbjct: 134 SIDRIPTWITRVTQDLNISPIYDGRFWNPPKEQQYQFKHGHSTRPVEGLKIYEAHVGISS 193
Query: 66 QEQKCASYEDF 76
+ +Y++F
Sbjct: 194 PNMRVTTYKEF 204
>sp|Q757Q6|GLGB_ASHGO 1,4-alpha-glucan-branching enzyme OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=GLC3
PE=3 SV=1
Length = 703
Score = 50.8 bits (120), Expect = 3e-06, Method: Composition-based stats.
Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 10/79 (12%)
Query: 8 ILRLSPWATYVTEPPVV-----GHAYEQRIWNPKPQDKHKWTSSKPKKPDN---LKIYES 59
I RL W T+P G +YE R WNP +K+ +P+ N L+IYE+
Sbjct: 141 IHRLPAWIKRATQPSKETAKEWGPSYEARFWNPA--SPYKFKHERPRLDPNVESLRIYEA 198
Query: 60 HVGICTQEQKCASYEDFVR 78
HVGI T E + SY +F +
Sbjct: 199 HVGISTPEPRVGSYSEFTK 217
>sp|Q01401|GLGB_ORYSJ 1,4-alpha-glucan-branching enzyme, chloroplastic/amyloplastic
OS=Oryza sativa subsp. japonica GN=SBE1 PE=1 SV=2
Length = 820
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 10 RLSPWATYVT-EPPVVGHAYEQRIWNPKPQDKHKWTSSKPKKPDNLKIYESHVGICTQEQ 68
R+ W Y T + G Y+ W+P +++ + +P KPD +IYE+HVG+ +E
Sbjct: 201 RIPAWIRYATFDASKFGAPYDGVHWDPPACERYVFKHPRPPKPDAPRIYEAHVGMSGEEP 260
Query: 69 KCASYEDF 76
+ ++Y +F
Sbjct: 261 EVSTYREF 268
>sp|Q08047|GLGB_MAIZE 1,4-alpha-glucan-branching enzyme 2, chloroplastic/amyloplastic
OS=Zea mays GN=SBE1 PE=1 SV=1
Length = 799
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 14 WATYVTEPPVVGH-AYEQRIWNPKPQDKHKWTSSKPKKPDNLKIYESHVGICTQEQKCAS 72
W Y + P G Y+ ++P + K+ + ++PK+P +L+IYE+HVG+ + E K +
Sbjct: 248 WIKYSVQAP--GEIPYDGIYYDPPEEVKYVFRHAQPKRPKSLRIYETHVGMSSPEPKINT 305
Query: 73 YEDF 76
Y +F
Sbjct: 306 YVNF 309
>sp|Q9LZS3|GLGB2_ARATH 1,4-alpha-glucan-branching enzyme 2-2, chloroplastic/amyloplastic
OS=Arabidopsis thaliana GN=SBE2.2 PE=1 SV=1
Length = 805
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 30/44 (68%)
Query: 33 WNPKPQDKHKWTSSKPKKPDNLKIYESHVGICTQEQKCASYEDF 76
++P ++K+ + +PK+P +L+IYE+HVG+ + E +Y +F
Sbjct: 270 YDPPEEEKYVFKHPQPKRPKSLRIYEAHVGMSSTEPMVNTYANF 313
>sp|Q555Q9|GLGB_DICDI 1,4-alpha-glucan-branching enzyme OS=Dictyostelium discoideum
GN=glgB PE=3 SV=1
Length = 678
Score = 38.9 bits (89), Expect = 0.009, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 9/70 (12%)
Query: 10 RLSPWATYV---TEPPVVGHAYEQRIWNPKPQDKHKWTSSKPKKPDNLKIYESHVGICTQ 66
R+ W V E PV ++ WNP Q + + + P KP L+IYE+HVG+ ++
Sbjct: 137 RIPAWIKRVEQTKENPV----FDGVFWNPSKQ--YVFKNKSPMKPTELRIYEAHVGMSSE 190
Query: 67 EQKCASYEDF 76
+ ++Y F
Sbjct: 191 LPEISTYSKF 200
>sp|P30924|GLGB_SOLTU 1,4-alpha-glucan-branching enzyme OS=Solanum tuberosum GN=SBE1 PE=2
SV=2
Length = 861
Score = 38.9 bits (89), Expect = 0.010, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 10 RLSPWATYVT-EPPVVGHAYEQRIWNPKPQDKHKWTSSKPKKPDNLKIYESHVGICTQEQ 68
R+ W Y T + Y+ W+P P +++ + +P KP +IYE+HVG+ + E
Sbjct: 221 RIPAWIKYATADATKFAAPYDGVYWDPPPSERYHFKYPRPPKPRAPRIYEAHVGMSSSEP 280
Query: 69 KCASYEDF 76
+ SY +F
Sbjct: 281 RVNSYREF 288
>sp|Q4V7W2|FBX5B_XENLA F-box only protein 5-B OS=Xenopus laevis GN=fbxo5-b PE=2 SV=1
Length = 384
Score = 33.1 bits (74), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 48 PKKPDN-LKIYESHVGICTQEQKCASYEDFVRVHEERNL 85
P KPD K YE+ +G CT KCA D + VH + NL
Sbjct: 29 PVKPDRPCKGYENVLGSCTTVAKCADLTDDLPVHNKENL 67
>sp|Q9FYI3|FB23_ARATH Putative F-box protein At1g30945 OS=Arabidopsis thaliana
GN=At1g30945 PE=4 SV=1
Length = 168
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 11/50 (22%), Positives = 24/50 (48%)
Query: 29 EQRIWNPKPQDKHKWTSSKPKKPDNLKIYESHVGICTQEQKCASYEDFVR 78
E R+W + +KH+W+ P+ ++ + + IC +ED++
Sbjct: 90 ELRMWVLEDVEKHEWSRHVYSLPETIEFQQCNYNICVGGMNAIGFEDYLN 139
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.128 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,774,660
Number of Sequences: 539616
Number of extensions: 1485244
Number of successful extensions: 2212
Number of sequences better than 100.0: 26
Number of HSP's better than 100.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 2175
Number of HSP's gapped (non-prelim): 26
length of query: 99
length of database: 191,569,459
effective HSP length: 68
effective length of query: 31
effective length of database: 154,875,571
effective search space: 4801142701
effective search space used: 4801142701
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 55 (25.8 bits)