BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy9007
         (132 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q96VA4|GLGB_ASPOR 1,4-alpha-glucan-branching enzyme OS=Aspergillus oryzae (strain
           ATCC 42149 / RIB 40) GN=gbeA PE=2 SV=1
          Length = 689

 Score = 73.6 bits (179), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 32/77 (41%), Positives = 49/77 (63%)

Query: 21  ISRLSPWATYVTEPPVVGHAYEQRIWNPKPQDKHKWTSSKPKKPENLKIYESHVGICTQE 80
           I R+  W   V +   V   YE   WNP  + ++K+  S+PK+PE+L+IYE+HVGI + E
Sbjct: 139 IYRIPAWIKRVVQDLSVSPTYEAVFWNPPTEKQYKFQYSRPKRPESLRIYEAHVGISSPE 198

Query: 81  QKCASYEDFVRVVIPRI 97
            K A+Y++F   ++PRI
Sbjct: 199 TKVATYKEFTSNMLPRI 215



 Score = 29.6 bits (65), Expect = 6.3,   Method: Composition-based stats.
 Identities = 11/26 (42%), Positives = 15/26 (57%)

Query: 101 GDFNNWNREEFAYKKLDFGKWELVLP 126
           G+FNNW+       K  FG WE+ +P
Sbjct: 88  GEFNNWDVTAHPMTKNGFGVWEVTVP 113


>sp|D2WL32|GLGB3_ARATH 1,4-alpha-glucan-branching enzyme 3, chloroplastic/amyloplastic
           OS=Arabidopsis thaliana GN=SBE3 PE=1 SV=1
          Length = 899

 Score = 72.4 bits (176), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 35/82 (42%), Positives = 50/82 (60%), Gaps = 1/82 (1%)

Query: 20  PISRLSPWATYVTEPPVVGHAYEQRIWNPKPQDKHKWTSSKPKKPENLKIYESHVGICTQ 79
           P+ R+  WATYV +P   G       W P P+  +KW  SKPK PE+L+IYE HVGI   
Sbjct: 352 PLERVPAWATYV-QPEDEGKQAYAIHWEPSPEAAYKWKYSKPKVPESLRIYECHVGISGS 410

Query: 80  EQKCASYEDFVRVVIPRIVKQG 101
           E K +++E+F + V+P + + G
Sbjct: 411 EPKVSTFEEFTKKVLPHVKRAG 432


>sp|Q6CCT1|GLGB_YARLI 1,4-alpha-glucan-branching enzyme OS=Yarrowia lipolytica (strain
           CLIB 122 / E 150) GN=GLC3 PE=3 SV=1
          Length = 691

 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 31/81 (38%), Positives = 48/81 (59%)

Query: 21  ISRLSPWATYVTEPPVVGHAYEQRIWNPKPQDKHKWTSSKPKKPENLKIYESHVGICTQE 80
           + RL  W+TYV +       YE   WNP   +K++W +  P  P N +IYE+HVGI + E
Sbjct: 127 VDRLPAWSTYVVQDLSKSPIYEAVFWNPPESEKYQWKNKSPPTPANAQIYEAHVGISSSE 186

Query: 81  QKCASYEDFVRVVIPRIVKQG 101
            +  +Y++F + ++PRI K G
Sbjct: 187 PRVGTYKEFTKNILPRIHKLG 207



 Score = 38.5 bits (88), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 13/34 (38%), Positives = 22/34 (64%)

Query: 98  VKQGDFNNWNREEFAYKKLDFGKWELVLPPNPDG 131
           V  GDFN W+R+++   + ++G W + +PP  DG
Sbjct: 72  VLTGDFNGWDRQQYHMTRDEYGLWSVTVPPTSDG 105


>sp|Q9Y8H3|GLGB_EMENI 1,4-alpha-glucan-branching enzyme OS=Emericella nidulans (strain
           FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
           GN=be1 PE=2 SV=3
          Length = 684

 Score = 70.1 bits (170), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 31/86 (36%), Positives = 52/86 (60%)

Query: 12  TLIFRYLLPISRLSPWATYVTEPPVVGHAYEQRIWNPKPQDKHKWTSSKPKKPENLKIYE 71
           T++ R    I R+  W   V +   V   YE   WNP   +++ +  ++PKKPE+L+IYE
Sbjct: 125 TMVTRSGERIYRIPAWIKRVVQDLNVSPIYESVFWNPPKAERYNFQHARPKKPESLRIYE 184

Query: 72  SHVGICTQEQKCASYEDFVRVVIPRI 97
           +HVGI + + + A+Y++F   ++PRI
Sbjct: 185 AHVGISSPDTRVATYKEFTANMLPRI 210



 Score = 33.1 bits (74), Expect = 0.45,   Method: Composition-based stats.
 Identities = 12/26 (46%), Positives = 17/26 (65%)

Query: 101 GDFNNWNREEFAYKKLDFGKWELVLP 126
           GDFNNW+ +     + +FG WE+ LP
Sbjct: 83  GDFNNWDTKANPMTRDNFGVWEIALP 108


>sp|Q8NKE1|GLGB_GLOIN 1,4-alpha-glucan-branching enzyme OS=Glomus intraradices GN=GLC3
           PE=2 SV=1
          Length = 683

 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 36/81 (44%), Positives = 49/81 (60%), Gaps = 2/81 (2%)

Query: 21  ISRLSPWATYVTEPPVVGHAYEQRIWNPKPQDKHKWTSSKPKKPENLKIYESHVGICTQE 80
           I RL  W   VT+   V  AY+   WNP PQ K++W ++ PKKP +L+IYE+HVGI T E
Sbjct: 138 IDRLPAWIKRVTQDLNVSLAYDAIFWNP-PQ-KYQWKNNSPKKPTSLRIYEAHVGISTNE 195

Query: 81  QKCASYEDFVRVVIPRIVKQG 101
            +  +Y +F   V+ RI   G
Sbjct: 196 GRVGTYNEFTDNVLKRIKDLG 216



 Score = 31.2 bits (69), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 12/27 (44%), Positives = 18/27 (66%)

Query: 101 GDFNNWNREEFAYKKLDFGKWELVLPP 127
           G+FN+W+R +   KK  FG WE+ +P 
Sbjct: 87  GEFNDWDRSKHPMKKDSFGVWEVHIPA 113


>sp|Q9D6Y9|GLGB_MOUSE 1,4-alpha-glucan-branching enzyme OS=Mus musculus GN=Gbe1 PE=2 SV=1
          Length = 702

 Score = 68.2 bits (165), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 39/80 (48%), Positives = 50/80 (62%), Gaps = 5/80 (6%)

Query: 23  RLSPWATYVT-EPPVVGHAYEQRIWNPKPQDKHKWTSSKPKKPENLKIYESHVGICTQEQ 81
           R+SPWA YV  E   V   Y+   W   P+D +K+  S+PKKP +L+IYESHVGI + E 
Sbjct: 156 RISPWAKYVVRENNNVN--YDWIHW--APEDPYKFKHSRPKKPRSLRIYESHVGISSHEG 211

Query: 82  KCASYEDFVRVVIPRIVKQG 101
           K ASY+ F   V+PRI   G
Sbjct: 212 KIASYKHFTSNVLPRIKDLG 231



 Score = 41.6 bits (96), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/32 (50%), Positives = 22/32 (68%)

Query: 101 GDFNNWNREEFAYKKLDFGKWELVLPPNPDGS 132
           G+F+ WN     YKKL++GKWEL +PP  + S
Sbjct: 102 GEFSGWNPFSHPYKKLEYGKWELYIPPKQNKS 133


>sp|Q6BXN1|GLGB_DEBHA 1,4-alpha-glucan-branching enzyme OS=Debaryomyces hansenii (strain
           ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
           GN=GLC3 PE=3 SV=1
          Length = 711

 Score = 66.2 bits (160), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 35/83 (42%), Positives = 48/83 (57%), Gaps = 3/83 (3%)

Query: 21  ISRLSPWATYVTEPPVVGHAYEQRIWNPKPQDKHKWTSSKPK--KPENLKIYESHVGICT 78
           I RL PW    T P    + YE R WNP+P + +K+   +P+    + +KIYE+HVGI T
Sbjct: 146 IYRLCPWLKRAT-PSTENNLYEGRFWNPQPTETYKFKHERPRLESKDGIKIYEAHVGIST 204

Query: 79  QEQKCASYEDFVRVVIPRIVKQG 101
            E K  SY++F   V+P I K G
Sbjct: 205 PEPKVGSYKNFTTKVLPVIHKLG 227



 Score = 32.7 bits (73), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 4/48 (8%)

Query: 87  EDFVRVVIPRIVKQ---GDFNNWNREEFAYKKL-DFGKWELVLPPNPD 130
           E F+   IP +V+    GDFNNW+      K + DFG W L + P  +
Sbjct: 76  EVFINEYIPNVVEVSLVGDFNNWDTNTHKLKPVNDFGLWSLTIKPTEN 123


>sp|Q04446|GLGB_HUMAN 1,4-alpha-glucan-branching enzyme OS=Homo sapiens GN=GBE1 PE=1 SV=3
          Length = 702

 Score = 64.3 bits (155), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/76 (47%), Positives = 49/76 (64%), Gaps = 5/76 (6%)

Query: 23  RLSPWATYVT-EPPVVGHAYEQRIWNPKPQDKHKWTSSKPKKPENLKIYESHVGICTQEQ 81
           R+SPWA YV  E   V   Y+   W+P  +  +++  S+PKKP +L+IYESHVGI + E 
Sbjct: 156 RISPWAKYVVREGDNVN--YDWIHWDP--EHSYEFKHSRPKKPRSLRIYESHVGISSHEG 211

Query: 82  KCASYEDFVRVVIPRI 97
           K ASY+ F   V+PRI
Sbjct: 212 KVASYKHFTCNVLPRI 227



 Score = 48.5 bits (114), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 19/32 (59%), Positives = 23/32 (71%)

Query: 101 GDFNNWNREEFAYKKLDFGKWELVLPPNPDGS 132
           GDFN WN   + YKKLD+GKWEL +PP  + S
Sbjct: 102 GDFNGWNPFSYPYKKLDYGKWELYIPPKQNKS 133


>sp|Q6T308|GLGB_FELCA 1,4-alpha-glucan-branching enzyme OS=Felis catus GN=GBE1 PE=2 SV=1
          Length = 699

 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/82 (46%), Positives = 51/82 (62%), Gaps = 5/82 (6%)

Query: 21  ISRLSPWATYVT-EPPVVGHAYEQRIWNPKPQDKHKWTSSKPKKPENLKIYESHVGICTQ 79
           + R+SPWA YVT E   V   Y+   W+P  +  +K+  S+PKKP  ++IYESHVGI + 
Sbjct: 151 LYRISPWAKYVTREGENVN--YDWTHWDP--EHPYKFKHSRPKKPRGVRIYESHVGISSY 206

Query: 80  EQKCASYEDFVRVVIPRIVKQG 101
           E K ASY+ F   V+PRI   G
Sbjct: 207 EGKIASYKHFTYNVLPRIKDLG 228



 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 25/36 (69%)

Query: 97  IVKQGDFNNWNREEFAYKKLDFGKWELVLPPNPDGS 132
           +   GDFN+WN   + YKKLD+GKWEL +PP  + S
Sbjct: 95  VFLTGDFNDWNPFSYPYKKLDYGKWELYIPPKQNKS 130


>sp|Q6EAS5|GLGB_HORSE 1,4-alpha-glucan-branching enzyme OS=Equus caballus GN=GBE1 PE=2
           SV=1
          Length = 699

 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 38/80 (47%), Positives = 50/80 (62%), Gaps = 5/80 (6%)

Query: 23  RLSPWATYVT-EPPVVGHAYEQRIWNPKPQDKHKWTSSKPKKPENLKIYESHVGICTQEQ 81
           R+SPWA YV  E   V   Y+   W+P  +  +K+  S+PKKP +L+IYESHVGI + E 
Sbjct: 153 RISPWAKYVVRESGNVN--YDWIHWDP--EQPYKFKHSRPKKPRSLRIYESHVGISSHEG 208

Query: 82  KCASYEDFVRVVIPRIVKQG 101
           K ASY+ F   V+PRI   G
Sbjct: 209 KIASYKHFTCNVLPRIKGLG 228



 Score = 47.0 bits (110), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 26/36 (72%)

Query: 97  IVKQGDFNNWNREEFAYKKLDFGKWELVLPPNPDGS 132
           +   GDFN+WN   + YKKLD+GKW+L +PP P+ S
Sbjct: 95  VFLTGDFNDWNPFSYPYKKLDYGKWDLYIPPKPNKS 130


>sp|O23647|GLGB1_ARATH 1,4-alpha-glucan-branching enzyme 2-1, chloroplastic/amyloplastic
           OS=Arabidopsis thaliana GN=SBE2.1 PE=1 SV=1
          Length = 858

 Score = 61.6 bits (148), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/76 (40%), Positives = 45/76 (59%), Gaps = 3/76 (3%)

Query: 27  WATYVTEPPVVGH-AYEQRIWNPKPQDKHKWTSSKPKKPENLKIYESHVGICTQEQKCAS 85
           W  Y  +PP  G   Y    ++P  +DK+ +   +PKKP +L+IYESHVG+ + E K  +
Sbjct: 287 WIKYSVQPP--GEIPYNGVYYDPPEEDKYAFKHPRPKKPTSLRIYESHVGMSSTEPKINT 344

Query: 86  YEDFVRVVIPRIVKQG 101
           Y +F   V+PRI K G
Sbjct: 345 YANFRDDVLPRIKKLG 360



 Score = 44.3 bits (103), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/32 (56%), Positives = 21/32 (65%)

Query: 101 GDFNNWNREEFAYKKLDFGKWELVLPPNPDGS 132
           GDFNNWN +     + DFG WE+ LP N DGS
Sbjct: 230 GDFNNWNAKSDVMARNDFGVWEIFLPNNADGS 261


>sp|Q6FJV0|GLGB_CANGA 1,4-alpha-glucan-branching enzyme OS=Candida glabrata (strain ATCC
           2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
           GN=GLC3 PE=3 SV=1
          Length = 706

 Score = 60.1 bits (144), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 14/97 (14%)

Query: 17  YLLP----ISRLSPWATYVTEPPV-----VGHAYEQRIWNPKPQDKHKWTSSKPK---KP 64
           ++LP    + R+  W T  T+P        G  YE R WNP   + +++   +PK     
Sbjct: 136 FVLPDGSKVYRIPAWITRATQPSKETAQKYGPTYEGRFWNPP--NSYQFKHQRPKFNLAN 193

Query: 65  ENLKIYESHVGICTQEQKCASYEDFVRVVIPRIVKQG 101
           +++KIYE+H+GI + E K ASY++F + V+PRI   G
Sbjct: 194 DSIKIYEAHIGISSPEPKVASYKEFTQNVLPRIKHLG 230



 Score = 29.6 bits (65), Expect = 5.2,   Method: Composition-based stats.
 Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 1/32 (3%)

Query: 101 GDFNNWNREEFAYKKLD-FGKWELVLPPNPDG 131
           G+FNNWN E    K  D FG + + L P  +G
Sbjct: 91  GEFNNWNEESHEMKHKDEFGVFSITLAPLENG 122


>sp|Q757Q6|GLGB_ASHGO 1,4-alpha-glucan-branching enzyme OS=Ashbya gossypii (strain ATCC
           10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=GLC3
           PE=3 SV=1
          Length = 703

 Score = 60.1 bits (144), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 34/89 (38%), Positives = 47/89 (52%), Gaps = 10/89 (11%)

Query: 21  ISRLSPWATYVTEPPVV-----GHAYEQRIWNPKPQDKHKWTSSKPK---KPENLKIYES 72
           I RL  W    T+P        G +YE R WNP     +K+   +P+     E+L+IYE+
Sbjct: 141 IHRLPAWIKRATQPSKETAKEWGPSYEARFWNPA--SPYKFKHERPRLDPNVESLRIYEA 198

Query: 73  HVGICTQEQKCASYEDFVRVVIPRIVKQG 101
           HVGI T E +  SY +F + V+PRI   G
Sbjct: 199 HVGISTPEPRVGSYSEFTKDVLPRIRDLG 227


>sp|P0CN82|GLGB_CRYNJ 1,4-alpha-glucan-branching enzyme OS=Cryptococcus neoformans var.
           neoformans serotype D (strain JEC21 / ATCC MYA-565)
           GN=GLC3 PE=3 SV=1
          Length = 682

 Score = 59.3 bits (142), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 1/82 (1%)

Query: 21  ISRLSPWATYVTEPPVVGHAYEQRIWNPKPQDKHKWTSSKPKKP-ENLKIYESHVGICTQ 79
           I R+  W T VT+   +   Y+ R WNP  + ++++      +P E LKIYE+HVGI + 
Sbjct: 135 IDRIPTWITRVTQDLNISPIYDGRFWNPPKEQQYQFKHGHSTRPVEGLKIYEAHVGISSP 194

Query: 80  EQKCASYEDFVRVVIPRIVKQG 101
             +  +Y++F   V+P+I + G
Sbjct: 195 NMRVTTYKEFEVDVLPKIKQLG 216



 Score = 31.6 bits (70), Expect = 1.5,   Method: Composition-based stats.
 Identities = 13/31 (41%), Positives = 16/31 (51%)

Query: 101 GDFNNWNREEFAYKKLDFGKWELVLPPNPDG 131
           G+FNNW+       K  FG WE  +PP   G
Sbjct: 83  GEFNNWSHTANPMTKSPFGVWECYVPPVSPG 113


>sp|P0CN83|GLGB_CRYNB 1,4-alpha-glucan-branching enzyme OS=Cryptococcus neoformans var.
           neoformans serotype D (strain B-3501A) GN=GLC3 PE=3 SV=1
          Length = 682

 Score = 59.3 bits (142), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 1/82 (1%)

Query: 21  ISRLSPWATYVTEPPVVGHAYEQRIWNPKPQDKHKWTSSKPKKP-ENLKIYESHVGICTQ 79
           I R+  W T VT+   +   Y+ R WNP  + ++++      +P E LKIYE+HVGI + 
Sbjct: 135 IDRIPTWITRVTQDLNISPIYDGRFWNPPKEQQYQFKHGHSTRPVEGLKIYEAHVGISSP 194

Query: 80  EQKCASYEDFVRVVIPRIVKQG 101
             +  +Y++F   V+P+I + G
Sbjct: 195 NMRVTTYKEFEVDVLPKIKQLG 216



 Score = 31.6 bits (70), Expect = 1.5,   Method: Composition-based stats.
 Identities = 13/31 (41%), Positives = 16/31 (51%)

Query: 101 GDFNNWNREEFAYKKLDFGKWELVLPPNPDG 131
           G+FNNW+       K  FG WE  +PP   G
Sbjct: 83  GEFNNWSHTANPMTKSPFGVWECYVPPVSPG 113


>sp|Q6CX53|GLGB_KLULA 1,4-alpha-glucan-branching enzyme OS=Kluyveromyces lactis (strain
           ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
           Y-1140 / WM37) GN=GLC3 PE=3 SV=1
          Length = 719

 Score = 59.3 bits (142), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 34/89 (38%), Positives = 49/89 (55%), Gaps = 10/89 (11%)

Query: 21  ISRLSPWATYVTEP-----PVVGHAYEQRIWNPKPQDKHKWTSSKP---KKPENLKIYES 72
           I RL  W T  T+P        G +YE R WNP     + + + +P   +  ++L+IYE+
Sbjct: 150 IYRLPAWITRATQPDKETAKQWGPSYEARFWNPPVH--YSFKNKRPGFMRDTDSLRIYEA 207

Query: 73  HVGICTQEQKCASYEDFVRVVIPRIVKQG 101
           HVGI T E K  SY++F + V+PRI   G
Sbjct: 208 HVGISTPEPKVGSYKEFTQNVLPRIKDLG 236


>sp|P32775|GLGB_YEAST 1,4-alpha-glucan-branching enzyme OS=Saccharomyces cerevisiae
           (strain ATCC 204508 / S288c) GN=GLC3 PE=1 SV=2
          Length = 704

 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/93 (39%), Positives = 53/93 (56%), Gaps = 14/93 (15%)

Query: 17  YLLP----ISRLSPWATYVTEPP-----VVGHAYEQRIWNPKPQDKHKWTSSKPKKPEN- 66
           ++LP    I RL  W T  T+P        G AYE R WNP  ++ +K+   +PK  E+ 
Sbjct: 134 FILPDGSKIFRLPAWITRATQPSKETSKQFGPAYEGRFWNP--ENPYKFVHPRPKFSESV 191

Query: 67  --LKIYESHVGICTQEQKCASYEDFVRVVIPRI 97
             L+IYE+HVGI + E K  +Y++F   V+PRI
Sbjct: 192 DSLRIYEAHVGISSPEPKITTYKEFTEKVLPRI 224



 Score = 30.4 bits (67), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)

Query: 96  RIVKQGDFNNWNREEFAYKKLD-FGKWELVLPPNPDG 131
           R    GDFNNW+      K  D FG + + L P P+G
Sbjct: 84  RAFLVGDFNNWDTTSHELKNKDEFGNFTITLHPLPNG 120


>sp|Q01401|GLGB_ORYSJ 1,4-alpha-glucan-branching enzyme, chloroplastic/amyloplastic
           OS=Oryza sativa subsp. japonica GN=SBE1 PE=1 SV=2
          Length = 820

 Score = 54.7 bits (130), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 5/88 (5%)

Query: 21  ISRLSPWATYVT-EPPVVGHAYEQRIWNPKPQDKHKWTSSKPKKPENLKIYESHVGICTQ 79
           + R+  W  Y T +    G  Y+   W+P   +++ +   +P KP+  +IYE+HVG+  +
Sbjct: 199 VDRIPAWIRYATFDASKFGAPYDGVHWDPPACERYVFKHPRPPKPDAPRIYEAHVGMSGE 258

Query: 80  EQKCASYEDFVRVVIPRIVKQGDFNNWN 107
           E + ++Y +F   V+PRI      NN+N
Sbjct: 259 EPEVSTYREFADNVLPRIRA----NNYN 282


>sp|Q08047|GLGB_MAIZE 1,4-alpha-glucan-branching enzyme 2, chloroplastic/amyloplastic
           OS=Zea mays GN=SBE1 PE=1 SV=1
          Length = 799

 Score = 53.1 bits (126), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 27/76 (35%), Positives = 46/76 (60%), Gaps = 3/76 (3%)

Query: 27  WATYVTEPPVVGH-AYEQRIWNPKPQDKHKWTSSKPKKPENLKIYESHVGICTQEQKCAS 85
           W  Y  + P  G   Y+   ++P  + K+ +  ++PK+P++L+IYE+HVG+ + E K  +
Sbjct: 248 WIKYSVQAP--GEIPYDGIYYDPPEEVKYVFRHAQPKRPKSLRIYETHVGMSSPEPKINT 305

Query: 86  YEDFVRVVIPRIVKQG 101
           Y +F   V+PRI K G
Sbjct: 306 YVNFRDEVLPRIKKLG 321



 Score = 36.6 bits (83), Expect = 0.046,   Method: Composition-based stats.
 Identities = 15/32 (46%), Positives = 19/32 (59%)

Query: 101 GDFNNWNREEFAYKKLDFGKWELVLPPNPDGS 132
           GD NNW+       K +FG WE+ LP N DG+
Sbjct: 191 GDVNNWDPNADRMSKNEFGVWEIFLPNNADGT 222


>sp|Q9LZS3|GLGB2_ARATH 1,4-alpha-glucan-branching enzyme 2-2, chloroplastic/amyloplastic
           OS=Arabidopsis thaliana GN=SBE2.2 PE=1 SV=1
          Length = 805

 Score = 50.1 bits (118), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 21/56 (37%), Positives = 38/56 (67%)

Query: 46  WNPKPQDKHKWTSSKPKKPENLKIYESHVGICTQEQKCASYEDFVRVVIPRIVKQG 101
           ++P  ++K+ +   +PK+P++L+IYE+HVG+ + E    +Y +F   V+PRI K G
Sbjct: 270 YDPPEEEKYVFKHPQPKRPKSLRIYEAHVGMSSTEPMVNTYANFRDDVLPRIKKLG 325



 Score = 41.2 bits (95), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/32 (53%), Positives = 20/32 (62%)

Query: 101 GDFNNWNREEFAYKKLDFGKWELVLPPNPDGS 132
           GDFNNWN       + +FG WE+ LP N DGS
Sbjct: 195 GDFNNWNSNADIMTRNEFGVWEIFLPNNTDGS 226


>sp|P30924|GLGB_SOLTU 1,4-alpha-glucan-branching enzyme OS=Solanum tuberosum GN=SBE1 PE=2
           SV=2
          Length = 861

 Score = 45.8 bits (107), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 5/88 (5%)

Query: 21  ISRLSPWATYVTEPPVVGHA-YEQRIWNPKPQDKHKWTSSKPKKPENLKIYESHVGICTQ 79
           + R+  W  Y T       A Y+   W+P P +++ +   +P KP   +IYE+HVG+ + 
Sbjct: 219 VDRIPAWIKYATADATKFAAPYDGVYWDPPPSERYHFKYPRPPKPRAPRIYEAHVGMSSS 278

Query: 80  EQKCASYEDFVRVVIPRIVKQGDFNNWN 107
           E +  SY +F   V+PRI      NN+N
Sbjct: 279 EPRVNSYREFADDVLPRIKA----NNYN 302



 Score = 29.3 bits (64), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 11/26 (42%), Positives = 14/26 (53%)

Query: 101 GDFNNWNREEFAYKKLDFGKWELVLP 126
           GDFN WN      +K  FG W + +P
Sbjct: 168 GDFNGWNGSNHMMEKDQFGVWSIRIP 193


>sp|Q555Q9|GLGB_DICDI 1,4-alpha-glucan-branching enzyme OS=Dictyostelium discoideum
           GN=glgB PE=3 SV=1
          Length = 678

 Score = 42.4 bits (98), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 2/62 (3%)

Query: 40  AYEQRIWNPKPQDKHKWTSSKPKKPENLKIYESHVGICTQEQKCASYEDFVRVVIPRIVK 99
            ++   WNP  Q  + + +  P KP  L+IYE+HVG+ ++  + ++Y  F   V+P + +
Sbjct: 153 VFDGVFWNPSKQ--YVFKNKSPMKPTELRIYEAHVGMSSELPEISTYSKFKDTVLPMVKE 210

Query: 100 QG 101
            G
Sbjct: 211 LG 212



 Score = 34.3 bits (77), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 11/31 (35%), Positives = 20/31 (64%)

Query: 101 GDFNNWNREEFAYKKLDFGKWELVLPPNPDG 131
           GDFN WN+     ++ ++G+W + +P N +G
Sbjct: 83  GDFNQWNKTSHPLERDNYGRWSIFIPNNSNG 113


>sp|Q8GYY1|HSFA3_ARATH Heat stress transcription factor A-3 OS=Arabidopsis thaliana
           GN=HSFA3 PE=2 SV=2
          Length = 412

 Score = 32.3 bits (72), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 12/39 (30%), Positives = 25/39 (64%), Gaps = 2/39 (5%)

Query: 88  DFVRVVIPRIVKQGDFNNWNRE--EFAYKKLDFGKWELV 124
           +F R+++PR  K  +F+++ R+   + ++K+D  KWE  
Sbjct: 89  EFARIILPRNFKHNNFSSFVRQLNTYGFRKIDTDKWEFA 127


>sp|Q9RTB7|GLGB_DEIRA 1,4-alpha-glucan branching enzyme GlgB OS=Deinococcus radiodurans
           (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 /
           NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422) GN=glgB PE=3
           SV=1
          Length = 705

 Score = 31.6 bits (70), Expect = 1.3,   Method: Composition-based stats.
 Identities = 13/31 (41%), Positives = 18/31 (58%)

Query: 101 GDFNNWNREEFAYKKLDFGKWELVLPPNPDG 131
           GDFN+WN  +   ++LDFG W   +P    G
Sbjct: 56  GDFNDWNGFDHPLQRLDFGFWGAFVPAAQPG 86


>sp|Q9KNE8|GLGB_VIBCH 1,4-alpha-glucan branching enzyme GlgB OS=Vibrio cholerae serotype
           O1 (strain ATCC 39315 / El Tor Inaba N16961) GN=glgB
           PE=3 SV=1
          Length = 666

 Score = 31.6 bits (70), Expect = 1.5,   Method: Composition-based stats.
 Identities = 11/32 (34%), Positives = 20/32 (62%)

Query: 101 GDFNNWNREEFAYKKLDFGKWELVLPPNPDGS 132
           G FN+W+      ++LD+G W + +P  P+G+
Sbjct: 92  GAFNHWDGRRHPMQRLDYGIWGIFIPGLPEGT 123


>sp|Q8PDD1|GLGB2_XANCP 1,4-alpha-glucan branching enzyme GlgB 2 OS=Xanthomonas campestris
           pv. campestris (strain ATCC 33913 / NCPPB 528 / LMG 568)
           GN=glgB2 PE=3 SV=1
          Length = 729

 Score = 31.2 bits (69), Expect = 1.8,   Method: Composition-based stats.
 Identities = 13/31 (41%), Positives = 16/31 (51%)

Query: 96  RIVKQGDFNNWNREEFAYKKLDFGKWELVLP 126
           R+   GDFN W       ++   G WELVLP
Sbjct: 151 RVAVVGDFNGWEPRRHPMRQRSGGIWELVLP 181


>sp|Q4UZL7|GLGB2_XANC8 1,4-alpha-glucan branching enzyme GlgB 2 OS=Xanthomonas campestris
           pv. campestris (strain 8004) GN=glgB2 PE=3 SV=1
          Length = 729

 Score = 31.2 bits (69), Expect = 1.8,   Method: Composition-based stats.
 Identities = 13/31 (41%), Positives = 16/31 (51%)

Query: 96  RIVKQGDFNNWNREEFAYKKLDFGKWELVLP 126
           R+   GDFN W       ++   G WELVLP
Sbjct: 151 RVAVVGDFNGWEPRRHPMRQRSGGIWELVLP 181


>sp|Q15VD0|GLGB_PSEA6 1,4-alpha-glucan branching enzyme GlgB OS=Pseudoalteromonas
           atlantica (strain T6c / ATCC BAA-1087) GN=glgB PE=3 SV=1
          Length = 729

 Score = 31.2 bits (69), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 13/26 (50%), Positives = 16/26 (61%)

Query: 101 GDFNNWNREEFAYKKLDFGKWELVLP 126
           GDFN W+      +K DFG W LV+P
Sbjct: 151 GDFNYWDGSCLPMQKTDFGYWVLVVP 176


>sp|Q9FYI3|FB23_ARATH Putative F-box protein At1g30945 OS=Arabidopsis thaliana
           GN=At1g30945 PE=4 SV=1
          Length = 168

 Score = 31.2 bits (69), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 12/49 (24%), Positives = 24/49 (48%)

Query: 42  EQRIWNPKPQDKHKWTSSKPKKPENLKIYESHVGICTQEQKCASYEDFV 90
           E R+W  +  +KH+W+      PE ++  + +  IC        +ED++
Sbjct: 90  ELRMWVLEDVEKHEWSRHVYSLPETIEFQQCNYNICVGGMNAIGFEDYL 138


>sp|Q1IZQ3|GLGB_DEIGD 1,4-alpha-glucan branching enzyme GlgB OS=Deinococcus geothermalis
           (strain DSM 11300) GN=glgB PE=3 SV=1
          Length = 652

 Score = 30.8 bits (68), Expect = 2.3,   Method: Composition-based stats.
 Identities = 12/26 (46%), Positives = 16/26 (61%)

Query: 101 GDFNNWNREEFAYKKLDFGKWELVLP 126
           GDFN WN  +   ++LDFG W   +P
Sbjct: 72  GDFNGWNGFDHPMQRLDFGFWGAFVP 97


>sp|Q8ZYM8|SYD_PYRAE Aspartate--tRNA ligase OS=Pyrobaculum aerophilum (strain ATCC 51768
           / IM2 / DSM 7523 / JCM 9630 / NBRC 100827) GN=aspS PE=3
           SV=1
          Length = 428

 Score = 30.4 bits (67), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 2/56 (3%)

Query: 45  IWNPKPQ--DKHKWTSSKPKKPENLKIYESHVGICTQEQKCASYEDFVRVVIPRIV 98
           IW+  P    + KW S   K+P NL ++     +    ++    E FV V  P+I+
Sbjct: 110 IWSETPDLATRLKWRSVDLKRPRNLVVFTVASAMLRSIREVLYGEGFVEVFTPKII 165


>sp|Q0TQ16|GLGB_CLOP1 1,4-alpha-glucan branching enzyme GlgB OS=Clostridium perfringens
           (strain ATCC 13124 / NCTC 8237 / Type A) GN=glgB PE=3
           SV=1
          Length = 659

 Score = 30.4 bits (67), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 2/39 (5%)

Query: 95  PRIVKQGDFNNWN-REEFAYKKLD-FGKWELVLPPNPDG 131
            +I   GDFNNW  +EE++ KK++  G W L LP   +G
Sbjct: 76  SKIYVIGDFNNWELKEEYSMKKINERGIWSLFLPKLEEG 114


>sp|Q8XK15|GLGB2_CLOPE 1,4-alpha-glucan branching enzyme GlgB 2 OS=Clostridium perfringens
           (strain 13 / Type A) GN=glgB2 PE=3 SV=1
          Length = 664

 Score = 30.4 bits (67), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 2/39 (5%)

Query: 95  PRIVKQGDFNNWN-REEFAYKKLD-FGKWELVLPPNPDG 131
            +I   GDFNNW  +EE++ KK++  G W L LP   +G
Sbjct: 81  SKIYVIGDFNNWELKEEYSMKKINERGIWSLFLPKLEEG 119


>sp|Q5DZB8|GLGB_VIBF1 1,4-alpha-glucan branching enzyme GlgB OS=Vibrio fischeri (strain
           ATCC 700601 / ES114) GN=glgB PE=3 SV=1
          Length = 715

 Score = 30.0 bits (66), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 11/32 (34%), Positives = 18/32 (56%)

Query: 101 GDFNNWNREEFAYKKLDFGKWELVLPPNPDGS 132
           GDFN W+      +++D G W L +P +  G+
Sbjct: 143 GDFNQWDGRRHIMQRIDNGLWALFIPEHAVGT 174


>sp|Q8D4P0|GLGB_VIBVU 1,4-alpha-glucan branching enzyme GlgB OS=Vibrio vulnificus (strain
           CMCP6) GN=glgB PE=3 SV=1
          Length = 715

 Score = 30.0 bits (66), Expect = 4.4,   Method: Composition-based stats.
 Identities = 11/31 (35%), Positives = 18/31 (58%)

Query: 101 GDFNNWNREEFAYKKLDFGKWELVLPPNPDG 131
           G FN+W+      ++LD+G W L +P   +G
Sbjct: 143 GSFNDWDGRRHPMQRLDYGIWGLFIPDLAEG 173


>sp|Q6LHN1|GLGB_PHOPR 1,4-alpha-glucan branching enzyme GlgB OS=Photobacterium profundum
           GN=glgB PE=3 SV=1
          Length = 716

 Score = 30.0 bits (66), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 12/32 (37%), Positives = 18/32 (56%)

Query: 101 GDFNNWNREEFAYKKLDFGKWELVLPPNPDGS 132
           G+FN W+      ++LD G W L +P   DG+
Sbjct: 141 GEFNAWDGRRHPMQRLDDGLWGLFIPDLEDGT 172


>sp|Q7MG90|GLGB_VIBVY 1,4-alpha-glucan branching enzyme GlgB OS=Vibrio vulnificus (strain
           YJ016) GN=glgB PE=3 SV=2
          Length = 715

 Score = 29.6 bits (65), Expect = 5.7,   Method: Composition-based stats.
 Identities = 11/31 (35%), Positives = 18/31 (58%)

Query: 101 GDFNNWNREEFAYKKLDFGKWELVLPPNPDG 131
           G FN+W+      ++LD+G W L +P   +G
Sbjct: 143 GSFNDWDGRRHPMQRLDYGIWGLFIPGLTEG 173


>sp|Q0SSN2|GLGB2_CLOPS 1,4-alpha-glucan branching enzyme GlgB 2 OS=Clostridium perfringens
           (strain SM101 / Type A) GN=glgB2 PE=3 SV=1
          Length = 659

 Score = 29.3 bits (64), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 2/39 (5%)

Query: 95  PRIVKQGDFNNWN-REEFAYKKLD-FGKWELVLPPNPDG 131
            +I   GDFNNW  +EE++ KK++  G W L +P   +G
Sbjct: 76  SKIYIIGDFNNWELKEEYSMKKINERGIWSLFIPKLEEG 114


>sp|Q5L6K4|GLGB_CHLAB 1,4-alpha-glucan branching enzyme GlgB OS=Chlamydophila abortus
           (strain S26/3) GN=glgB PE=3 SV=1
          Length = 721

 Score = 29.3 bits (64), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)

Query: 96  RIVKQGDFNNWNREEFAYKKL-DFGKWELVLPPNPDGS 132
           R+   GDFN WN      +K+ D G WEL +P   +G+
Sbjct: 144 RVSVVGDFNFWNGLVNPLRKVSDLGVWELFIPGLEEGT 181


>sp|Q1MBS9|GLGB1_RHIL3 1,4-alpha-glucan branching enzyme GlgB 1 OS=Rhizobium leguminosarum
           bv. viciae (strain 3841) GN=glgB1 PE=3 SV=1
          Length = 735

 Score = 29.3 bits (64), Expect = 7.5,   Method: Composition-based stats.
 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)

Query: 96  RIVKQGDFNNWN-REEFAYKKLDFGKWELVLPPNPDG 131
           R+   GDFNNW+ R      + D G WE+  P  P G
Sbjct: 158 RVSVVGDFNNWDGRRHVMRFRSDSGIWEIFAPDVPIG 194


>sp|A6UQ31|Y697_METVS MEMO1 family protein Mevan_0697 OS=Methanococcus vannielii
          (strain SB / ATCC 35089 / DSM 1224) GN=Mevan_0697 PE=3
          SV=1
          Length = 284

 Score = 29.3 bits (64), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 12/28 (42%), Positives = 17/28 (60%)

Query: 16 RYLLPISRLSPWATYVTEPPVVGHAYEQ 43
          RY  PI  +SP A YV   P+  H+Y++
Sbjct: 42 RYEKPIGVISPHAGYVYSGPIAAHSYKE 69


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.319    0.138    0.454 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,521,652
Number of Sequences: 539616
Number of extensions: 2350819
Number of successful extensions: 4486
Number of sequences better than 100.0: 49
Number of HSP's better than 100.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 4415
Number of HSP's gapped (non-prelim): 72
length of query: 132
length of database: 191,569,459
effective HSP length: 98
effective length of query: 34
effective length of database: 138,687,091
effective search space: 4715361094
effective search space used: 4715361094
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)