BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9008
(89 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6CCT1|GLGB_YARLI 1,4-alpha-glucan-branching enzyme OS=Yarrowia lipolytica (strain
CLIB 122 / E 150) GN=GLC3 PE=3 SV=1
Length = 691
Score = 46.6 bits (109), Expect = 5e-05, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 28/45 (62%)
Query: 2 SQPSGIEKFTTSYNKYGIHVQADNSVRCFEWAPSAQQLYLTVYWN 46
++ G+ +F SY +YG+HV DNSV EWAP A + LT +N
Sbjct: 34 AKEGGLAEFAASYKRYGLHVNKDNSVTYREWAPGASEAVLTGDFN 78
>sp|Q6EAS5|GLGB_HORSE 1,4-alpha-glucan-branching enzyme OS=Equus caballus GN=GBE1 PE=2
SV=1
Length = 699
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 28/42 (66%)
Query: 6 GIEKFTTSYNKYGIHVQADNSVRCFEWAPSAQQLYLTVYWNE 47
GI+KF+ Y +G+H AD + C EWAP A+ ++LT +N+
Sbjct: 62 GIDKFSRGYESFGVHRCADGGLYCKEWAPGAEGVFLTGDFND 103
>sp|Q6T308|GLGB_FELCA 1,4-alpha-glucan-branching enzyme OS=Felis catus GN=GBE1 PE=2 SV=1
Length = 699
Score = 45.1 bits (105), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 28/42 (66%)
Query: 6 GIEKFTTSYNKYGIHVQADNSVRCFEWAPSAQQLYLTVYWNE 47
GI+KF+ Y +G+H AD + C EWAP A+ ++LT +N+
Sbjct: 62 GIDKFSRGYESFGVHRCADGGLYCKEWAPGAEGVFLTGDFND 103
>sp|Q04446|GLGB_HUMAN 1,4-alpha-glucan-branching enzyme OS=Homo sapiens GN=GBE1 PE=1 SV=3
Length = 702
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 27/41 (65%)
Query: 6 GIEKFTTSYNKYGIHVQADNSVRCFEWAPSAQQLYLTVYWN 46
GI+KF+ Y +G+H AD + C EWAP A+ ++LT +N
Sbjct: 65 GIDKFSRGYESFGVHRCADGGLYCKEWAPGAEGVFLTGDFN 105
>sp|Q9D6Y9|GLGB_MOUSE 1,4-alpha-glucan-branching enzyme OS=Mus musculus GN=Gbe1 PE=2 SV=1
Length = 702
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Query: 6 GIEKFTTSYNKYGIHVQADNSVRCFEWAPSAQQLYLT---VYWNEVS 49
GI+KF+ Y +GIH +D + C EWAP A+ ++LT WN S
Sbjct: 65 GIDKFSRGYESFGIHRCSDGGIYCKEWAPGAEGVFLTGEFSGWNPFS 111
>sp|Q96VA4|GLGB_ASPOR 1,4-alpha-glucan-branching enzyme OS=Aspergillus oryzae (strain
ATCC 42149 / RIB 40) GN=gbeA PE=2 SV=1
Length = 689
Score = 37.0 bits (84), Expect = 0.032, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 7/54 (12%)
Query: 6 GIEKFTTSYNKYGIHVQADNSVRCFEWAPSAQQLYLTVYWNE-------VSKNG 52
G+E F+ Y ++G++VQ++ + EWAP+A Q L +N ++KNG
Sbjct: 51 GLETFSKGYERFGLNVQSNGDIIYREWAPNAVQAQLVGEFNNWDVTAHPMTKNG 104
>sp|Q21WG7|GLGB_RHOFD 1,4-alpha-glucan branching enzyme GlgB OS=Rhodoferax
ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118)
GN=glgB PE=3 SV=1
Length = 625
Score = 35.8 bits (81), Expect = 0.074, Method: Composition-based stats.
Identities = 16/44 (36%), Positives = 25/44 (56%)
Query: 14 YNKYGIHVQADNSVRCFEWAPSAQQLYLTVYWNEVSKNGERQEL 57
YNK G H+Q++ WAP+A+ + + WN S N +R +L
Sbjct: 19 YNKLGCHLQSNGGANFAVWAPNAESVSVVGDWNYWSGNVDRLDL 62
>sp|Q01401|GLGB_ORYSJ 1,4-alpha-glucan-branching enzyme, chloroplastic/amyloplastic
OS=Oryza sativa subsp. japonica GN=SBE1 PE=1 SV=2
Length = 820
Score = 34.7 bits (78), Expect = 0.17, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Query: 6 GIEKFTTSYNKYGIHVQADNSVRCFEWAPSAQQLYLTVYWNEVSKNGERQELE 58
G+E+F+ Y K+GI+ D + EWAP+AQ+ L +N + NG + ++E
Sbjct: 112 GLEEFSKGYLKFGINT-VDGATIYREWAPAAQEAQLIGEFN--NWNGAKHKME 161
>sp|Q9Y8H3|GLGB_EMENI 1,4-alpha-glucan-branching enzyme OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=be1 PE=2 SV=3
Length = 684
Score = 32.7 bits (73), Expect = 0.66, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 23/41 (56%)
Query: 6 GIEKFTTSYNKYGIHVQADNSVRCFEWAPSAQQLYLTVYWN 46
G++KF+ Y K+G +V + EWAP+A + L +N
Sbjct: 46 GLDKFSKGYEKFGFNVSETGDITYREWAPNAIEAALVGDFN 86
>sp|Q555Q9|GLGB_DICDI 1,4-alpha-glucan-branching enzyme OS=Dictyostelium discoideum
GN=glgB PE=3 SV=1
Length = 678
Score = 32.3 bits (72), Expect = 0.80, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
Query: 9 KFTTSYNKYGIHVQADNSVRCFEWAPSAQQLYLT---VYWNEVSKNGER 54
KF+ Y +G +V D V EW PSA ++YL WN+ S ER
Sbjct: 50 KFSQGYEYFGFNVTKD-GVNYREWLPSAHEVYLVGDFNQWNKTSHPLER 97
>sp|A9VMV8|GLGB_BACWK 1,4-alpha-glucan branching enzyme GlgB OS=Bacillus
weihenstephanensis (strain KBAB4) GN=glgB PE=3 SV=1
Length = 645
Score = 32.3 bits (72), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 8 EKFTTSYNKYGIHVQADN---SVRCFEWAPSAQQLYLTVYWNE 47
EK+ SYN +G H+ ++ VRC WAP A+ + + +NE
Sbjct: 17 EKYYDSYNIFGAHIVTEDGMRGVRCTVWAPHAKAMSVVGDFNE 59
>sp|Q08047|GLGB_MAIZE 1,4-alpha-glucan-branching enzyme 2, chloroplastic/amyloplastic
OS=Zea mays GN=SBE1 PE=1 SV=1
Length = 799
Score = 31.2 bits (69), Expect = 1.9, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Query: 6 GIEKFTTSYNKYGIHVQADNSVRCFEWAPSAQQLYLTVYWNEVSKNGER 54
G+E F+ SY K+G + A+ + EWAP A L N N +R
Sbjct: 155 GLEAFSRSYEKFGFNASAE-GITYREWAPGAFSAALVGDVNNWDPNADR 202
>sp|Q6FJV0|GLGB_CANGA 1,4-alpha-glucan-branching enzyme OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=GLC3 PE=3 SV=1
Length = 706
Score = 31.2 bits (69), Expect = 2.1, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Query: 2 SQPSGIEKFTTSYNKYGIHV-QADNSVRCFEWAPSAQQLYLT---VYWNEVS 49
S+ S ++ +Y YG+H Q + EWAP+AQ+ +L WNE S
Sbjct: 49 SEQSLVDFARNAYKTYGLHANQQTKEIVYREWAPNAQRAFLVGEFNNWNEES 100
>sp|Q96301|SPY_ARATH Probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SPINDLY OS=Arabidopsis
thaliana GN=SPY PE=1 SV=1
Length = 914
Score = 30.4 bits (67), Expect = 3.5, Method: Composition-based stats.
Identities = 15/52 (28%), Positives = 23/52 (44%)
Query: 17 YGIHVQADNSVRCFEWAPSAQQLYLTVYWNEVSKNGERQELESTFLCNAKCF 68
Y +Q DN++ C+E A + +Y Y N R +LE C +C
Sbjct: 196 YSEMMQYDNALSCYEKAALERPMYAEAYCNMGVIYKNRGDLEMAITCYERCL 247
>sp|Q8NKE1|GLGB_GLOIN 1,4-alpha-glucan-branching enzyme OS=Glomus intraradices GN=GLC3
PE=2 SV=1
Length = 683
Score = 30.0 bits (66), Expect = 4.5, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 20/31 (64%)
Query: 6 GIEKFTTSYNKYGIHVQADNSVRCFEWAPSA 36
G +KF+ Y ++G++V + + EWAP+A
Sbjct: 50 GYDKFSRGYERFGLNVLPNGDIIYREWAPNA 80
>sp|Q6YZI0|SPY_ORYSJ Probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SPINDLY OS=Oryza sativa
subsp. japonica GN=SPY PE=3 SV=1
Length = 927
Score = 29.3 bits (64), Expect = 7.6, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 23/52 (44%)
Query: 17 YGIHVQADNSVRCFEWAPSAQQLYLTVYWNEVSKNGERQELESTFLCNAKCF 68
Y +Q D ++ C+E A + LY Y N R ELE+ C +C
Sbjct: 187 YSEMMQFDLALTCYEKAALERPLYAEAYCNMGVIYKNRGELEAAIACYERCL 238
>sp|O82039|SPY_PETHY Probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SPINDLY OS=Petunia
hybrida GN=SPY PE=2 SV=1
Length = 932
Score = 28.9 bits (63), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 23/52 (44%)
Query: 17 YGIHVQADNSVRCFEWAPSAQQLYLTVYWNEVSKNGERQELESTFLCNAKCF 68
Y +Q D ++ C+E A + +Y Y N R +LES C +C
Sbjct: 201 YSEMMQYDMALNCYEKAAIERPMYAEAYCNMGVIYKNRGDLESAIACYERCL 252
>sp|Q6CX53|GLGB_KLULA 1,4-alpha-glucan-branching enzyme OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=GLC3 PE=3 SV=1
Length = 719
Score = 28.9 bits (63), Expect = 9.8, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Query: 13 SYNKYGIHVQADN-SVRCFEWAPSAQQLYLT---VYWNEVSKNGERQE 56
+Y +G+H + +R EWAP+A + +L WNE + +R E
Sbjct: 63 AYKSFGLHADPGSLEIRYKEWAPNAVRAFLIGEFNSWNENANEMQRDE 110
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.130 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,532,923
Number of Sequences: 539616
Number of extensions: 1183873
Number of successful extensions: 1326
Number of sequences better than 100.0: 34
Number of HSP's better than 100.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 1311
Number of HSP's gapped (non-prelim): 34
length of query: 89
length of database: 191,569,459
effective HSP length: 59
effective length of query: 30
effective length of database: 159,732,115
effective search space: 4791963450
effective search space used: 4791963450
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 55 (25.8 bits)