BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9009
(258 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9Y8H3|GLGB_EMENI 1,4-alpha-glucan-branching enzyme OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=be1 PE=2 SV=3
Length = 684
Score = 82.4 bits (202), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 34/43 (79%), Positives = 41/43 (95%)
Query: 89 KGNEFGHPEWLDFPRAGNNSSYWHARRQWNLTDDELLKYKFLN 131
+GNEFGHPEWLDFPRAGNN+S+W+ARRQ NLT+D LL+Y+FLN
Sbjct: 522 EGNEFGHPEWLDFPRAGNNNSFWYARRQLNLTEDHLLRYRFLN 564
>sp|Q96VA4|GLGB_ASPOR 1,4-alpha-glucan-branching enzyme OS=Aspergillus oryzae (strain
ATCC 42149 / RIB 40) GN=gbeA PE=2 SV=1
Length = 689
Score = 81.3 bits (199), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 34/43 (79%), Positives = 40/43 (93%)
Query: 89 KGNEFGHPEWLDFPRAGNNSSYWHARRQWNLTDDELLKYKFLN 131
+GNEFGHPEWLDFPR GNN+S+W+ARRQ NLT+D LL+YKFLN
Sbjct: 527 EGNEFGHPEWLDFPRDGNNNSFWYARRQLNLTEDHLLRYKFLN 569
>sp|Q8NKE1|GLGB_GLOIN 1,4-alpha-glucan-branching enzyme OS=Glomus intraradices GN=GLC3
PE=2 SV=1
Length = 683
Score = 80.9 bits (198), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 33/43 (76%), Positives = 41/43 (95%)
Query: 89 KGNEFGHPEWLDFPRAGNNSSYWHARRQWNLTDDELLKYKFLN 131
+GNEFGHPEWLDFPRAGNN+S+ +ARRQWN+ DD+LL+YK+LN
Sbjct: 524 EGNEFGHPEWLDFPRAGNNNSFHYARRQWNVVDDDLLRYKYLN 566
>sp|Q9D6Y9|GLGB_MOUSE 1,4-alpha-glucan-branching enzyme OS=Mus musculus GN=Gbe1 PE=2 SV=1
Length = 702
Score = 80.9 bits (198), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 35/42 (83%), Positives = 39/42 (92%)
Query: 90 GNEFGHPEWLDFPRAGNNSSYWHARRQWNLTDDELLKYKFLN 131
GNEFGHPEWLDFPR GNN SY +ARRQ+NLTDD+LL+YKFLN
Sbjct: 540 GNEFGHPEWLDFPRKGNNESYHYARRQFNLTDDDLLRYKFLN 581
>sp|P30924|GLGB_SOLTU 1,4-alpha-glucan-branching enzyme OS=Solanum tuberosum GN=SBE1 PE=2
SV=2
Length = 861
Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 66/130 (50%), Gaps = 3/130 (2%)
Query: 4 WHNTDFKSSLTNRSVALTWVMFQSNRAGKMRTNGIFLFLLRLLDPEINRFKNTDLDFSQL 63
W + SSLTNR + + + + + FLL +D E+ + D S +
Sbjct: 527 WSMKEVTSSLTNRRYTEKCIAYAESHDQSIVGDKTIAFLL--MDKEMYSGMSCLTDASPV 584
Query: 64 FTEESTFY-INNIFPIATAPFPLVCIKGNEFGHPEWLDFPRAGNNSSYWHARRQWNLTDD 122
+ + + F +A + GNEFGHPEW+DFPR GNN SY RRQWNL D
Sbjct: 585 VDRGIALHKMIHFFTMALGGEGYLNFMGNEFGHPEWIDFPREGNNWSYDKCRRQWNLADS 644
Query: 123 ELLKYKFLNS 132
E L+YKF+N+
Sbjct: 645 EHLRYKFMNA 654
>sp|Q04446|GLGB_HUMAN 1,4-alpha-glucan-branching enzyme OS=Homo sapiens GN=GBE1 PE=1 SV=3
Length = 702
Score = 79.3 bits (194), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 34/42 (80%), Positives = 39/42 (92%)
Query: 90 GNEFGHPEWLDFPRAGNNSSYWHARRQWNLTDDELLKYKFLN 131
GNEFGHPEWLDFPR GNN SY +ARRQ++LTDD+LL+YKFLN
Sbjct: 540 GNEFGHPEWLDFPRKGNNESYHYARRQFHLTDDDLLRYKFLN 581
>sp|Q6EAS5|GLGB_HORSE 1,4-alpha-glucan-branching enzyme OS=Equus caballus GN=GBE1 PE=2
SV=1
Length = 699
Score = 79.0 bits (193), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 34/42 (80%), Positives = 39/42 (92%)
Query: 90 GNEFGHPEWLDFPRAGNNSSYWHARRQWNLTDDELLKYKFLN 131
GNEFGHPEWLDFPR GNN SY +ARRQ++LTDD+LL+YKFLN
Sbjct: 537 GNEFGHPEWLDFPRKGNNESYHYARRQFHLTDDDLLRYKFLN 578
>sp|Q6T308|GLGB_FELCA 1,4-alpha-glucan-branching enzyme OS=Felis catus GN=GBE1 PE=2 SV=1
Length = 699
Score = 79.0 bits (193), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 34/42 (80%), Positives = 39/42 (92%)
Query: 90 GNEFGHPEWLDFPRAGNNSSYWHARRQWNLTDDELLKYKFLN 131
GNEFGHPEWLDFPR GNN SY +ARRQ++LTDD+LL+YKFLN
Sbjct: 537 GNEFGHPEWLDFPRKGNNESYHYARRQFHLTDDDLLRYKFLN 578
>sp|Q6FJV0|GLGB_CANGA 1,4-alpha-glucan-branching enzyme OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=GLC3 PE=3 SV=1
Length = 706
Score = 77.4 bits (189), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 35/53 (66%), Positives = 42/53 (79%), Gaps = 2/53 (3%)
Query: 89 KGNEFGHPEWLDFPRAGNNSSYWHARRQWNLTDDELLKYKFLNSNETPATLDN 141
+GNEFGHPEWLDFPR GNN SY +ARRQ+NL DD+LL+Y+ L NE A + N
Sbjct: 546 EGNEFGHPEWLDFPRVGNNDSYHYARRQFNLVDDDLLRYRHL--NEFDAAMQN 596
>sp|P0CN82|GLGB_CRYNJ 1,4-alpha-glucan-branching enzyme OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=GLC3 PE=3 SV=1
Length = 682
Score = 74.7 bits (182), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 30/42 (71%), Positives = 38/42 (90%)
Query: 89 KGNEFGHPEWLDFPRAGNNSSYWHARRQWNLTDDELLKYKFL 130
+GNEFGHPEW+DFPR GN +S+ HARRQ+NL DD+LL+YK+L
Sbjct: 524 EGNEFGHPEWMDFPREGNGNSFAHARRQFNLVDDKLLRYKYL 565
>sp|P0CN83|GLGB_CRYNB 1,4-alpha-glucan-branching enzyme OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=GLC3 PE=3 SV=1
Length = 682
Score = 74.7 bits (182), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 30/42 (71%), Positives = 38/42 (90%)
Query: 89 KGNEFGHPEWLDFPRAGNNSSYWHARRQWNLTDDELLKYKFL 130
+GNEFGHPEW+DFPR GN +S+ HARRQ+NL DD+LL+YK+L
Sbjct: 524 EGNEFGHPEWMDFPREGNGNSFAHARRQFNLVDDKLLRYKYL 565
>sp|Q6BXN1|GLGB_DEBHA 1,4-alpha-glucan-branching enzyme OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=GLC3 PE=3 SV=1
Length = 711
Score = 74.3 bits (181), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 31/42 (73%), Positives = 37/42 (88%)
Query: 89 KGNEFGHPEWLDFPRAGNNSSYWHARRQWNLTDDELLKYKFL 130
+GNEFGHPEWLDFPR GN SY +ARRQ+NL +D+LL+YKFL
Sbjct: 541 EGNEFGHPEWLDFPRKGNGESYAYARRQFNLIEDDLLRYKFL 582
>sp|Q01401|GLGB_ORYSJ 1,4-alpha-glucan-branching enzyme, chloroplastic/amyloplastic
OS=Oryza sativa subsp. japonica GN=SBE1 PE=1 SV=2
Length = 820
Score = 72.8 bits (177), Expect = 2e-12, Method: Composition-based stats.
Identities = 28/43 (65%), Positives = 35/43 (81%)
Query: 90 GNEFGHPEWLDFPRAGNNSSYWHARRQWNLTDDELLKYKFLNS 132
GNEFGHPEW+DFPR GNN SY RRQW+L D + L+YK++N+
Sbjct: 592 GNEFGHPEWIDFPREGNNWSYDKCRRQWSLVDTDHLRYKYMNA 634
>sp|Q6CCT1|GLGB_YARLI 1,4-alpha-glucan-branching enzyme OS=Yarrowia lipolytica (strain
CLIB 122 / E 150) GN=GLC3 PE=3 SV=1
Length = 691
Score = 70.5 bits (171), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 36/43 (83%)
Query: 89 KGNEFGHPEWLDFPRAGNNSSYWHARRQWNLTDDELLKYKFLN 131
+GNEFGHPEWLDFPR GN SS+ + RRQW + DD+LL+Y+ LN
Sbjct: 525 EGNEFGHPEWLDFPREGNGSSFHYCRRQWPVVDDKLLRYQHLN 567
>sp|Q757Q6|GLGB_ASHGO 1,4-alpha-glucan-branching enzyme OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=GLC3
PE=3 SV=1
Length = 703
Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/42 (71%), Positives = 34/42 (80%)
Query: 89 KGNEFGHPEWLDFPRAGNNSSYWHARRQWNLTDDELLKYKFL 130
+GNEFGHPEWLDFP A N SY +ARRQ+NL DD LL+YK L
Sbjct: 542 EGNEFGHPEWLDFPNANNGDSYQYARRQFNLVDDGLLRYKHL 583
>sp|Q6CX53|GLGB_KLULA 1,4-alpha-glucan-branching enzyme OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=GLC3 PE=3 SV=1
Length = 719
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/42 (66%), Positives = 34/42 (80%)
Query: 89 KGNEFGHPEWLDFPRAGNNSSYWHARRQWNLTDDELLKYKFL 130
+GNEFGHPEWLDFP N SY +ARRQ+NL DD LL+Y++L
Sbjct: 552 EGNEFGHPEWLDFPNVNNGDSYHYARRQFNLVDDPLLRYQYL 593
>sp|P32775|GLGB_YEAST 1,4-alpha-glucan-branching enzyme OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=GLC3 PE=1 SV=2
Length = 704
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 34/43 (79%)
Query: 89 KGNEFGHPEWLDFPRAGNNSSYWHARRQWNLTDDELLKYKFLN 131
+GNEFGHPEWLDFP N SY +ARRQ+NL DD LL+Y+ LN
Sbjct: 544 EGNEFGHPEWLDFPNVNNGDSYKYARRQFNLADDPLLRYQNLN 586
>sp|Q555Q9|GLGB_DICDI 1,4-alpha-glucan-branching enzyme OS=Dictyostelium discoideum
GN=glgB PE=3 SV=1
Length = 678
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 34/41 (82%)
Query: 90 GNEFGHPEWLDFPRAGNNSSYWHARRQWNLTDDELLKYKFL 130
GNEFGHPEW+DFPR GNN+S HARR+W+L + LL+YK L
Sbjct: 519 GNEFGHPEWVDFPREGNNNSLHHARRRWDLYRNPLLRYKQL 559
>sp|O23647|GLGB1_ARATH 1,4-alpha-glucan-branching enzyme 2-1, chloroplastic/amyloplastic
OS=Arabidopsis thaliana GN=SBE2.1 PE=1 SV=1
Length = 858
Score = 56.6 bits (135), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/52 (51%), Positives = 32/52 (61%), Gaps = 11/52 (21%)
Query: 90 GNEFGHPEWLDFPR-----------AGNNSSYWHARRQWNLTDDELLKYKFL 130
GNEFGHPEW+DFPR AGNN SY RR+++L D E L+Y L
Sbjct: 668 GNEFGHPEWIDFPRTDQHLPDGRVIAGNNGSYDKCRRRFDLGDAEYLRYHGL 719
>sp|Q08047|GLGB_MAIZE 1,4-alpha-glucan-branching enzyme 2, chloroplastic/amyloplastic
OS=Zea mays GN=SBE1 PE=1 SV=1
Length = 799
Score = 54.3 bits (129), Expect = 9e-07, Method: Composition-based stats.
Identities = 24/49 (48%), Positives = 31/49 (63%), Gaps = 11/49 (22%)
Query: 90 GNEFGHPEWLDFPRA-----------GNNSSYWHARRQWNLTDDELLKY 127
GNEFGHPEW+DFPR GNN+SY RR+++L D + L+Y
Sbjct: 629 GNEFGHPEWIDFPRGPQRLPSGKFIPGNNNSYDKCRRRFDLGDADYLRY 677
>sp|Q9LZS3|GLGB2_ARATH 1,4-alpha-glucan-branching enzyme 2-2, chloroplastic/amyloplastic
OS=Arabidopsis thaliana GN=SBE2.2 PE=1 SV=1
Length = 805
Score = 53.5 bits (127), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/52 (48%), Positives = 32/52 (61%), Gaps = 11/52 (21%)
Query: 90 GNEFGHPEWLDFPRA-----------GNNSSYWHARRQWNLTDDELLKYKFL 130
GNEFGHPEW+DFPR GNN SY RR+++L D + L+Y+ L
Sbjct: 633 GNEFGHPEWIDFPRGEQRLSDGSVIPGNNFSYDKCRRRFDLGDADYLRYRGL 684
>sp|D2WL32|GLGB3_ARATH 1,4-alpha-glucan-branching enzyme 3, chloroplastic/amyloplastic
OS=Arabidopsis thaliana GN=SBE3 PE=1 SV=1
Length = 899
Score = 43.1 bits (100), Expect = 0.002, Method: Composition-based stats.
Identities = 18/40 (45%), Positives = 26/40 (65%)
Query: 90 GNEFGHPEWLDFPRAGNNSSYWHARRQWNLTDDELLKYKF 129
GNEFGHPE ++FP NN S+ A R+W+L + + + F
Sbjct: 737 GNEFGHPERVEFPTQSNNFSFSLANRRWDLLESGVHHHLF 776
>sp|B7NMJ5|GLGC_ECO7I Glucose-1-phosphate adenylyltransferase OS=Escherichia coli O7:K1
(strain IAI39 / ExPEC) GN=glgC PE=3 SV=1
Length = 431
Score = 33.9 bits (76), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 20/89 (22%)
Query: 33 MRTNGIFLF----LLRLLDPEINRFKNTDLDFSQ----LFTEESTFYINNIFPIATAPFP 84
+ + GI++F L LL+ E +R KN+ DF + TE Y + PFP
Sbjct: 210 LASMGIYVFDADYLYELLE-EDDRDKNSSHDFGKDLIPKITEAGLAYAH--------PFP 260
Query: 85 LVCIKGNEFGHPEWLDFPRAGNNSSYWHA 113
L C++ + P W D G +YW A
Sbjct: 261 LSCVQSDPDAEPYWRD---VGTLEAYWKA 286
>sp|A7HNL1|MNMG_FERNB tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG
OS=Fervidobacterium nodosum (strain ATCC 35602 / DSM
5306 / Rt17-B1) GN=mnmG PE=3 SV=1
Length = 626
Score = 33.5 bits (75), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 55/106 (51%), Gaps = 9/106 (8%)
Query: 155 QDFPFGCWVNMRTPESNPL--KYLLSK---NECEILSMEGFKLVPHIECPTLPATLDNTV 209
+D+P CW+ TPES+ + YL+ E +++ +G + P IE + ++
Sbjct: 244 KDYP--CWLTHTTPESHKIIRDYLIFSPLYGEVKLIQAKGPRYCPSIEDKVVKFERESHQ 301
Query: 210 VCLSPDGREETQDFPFGCWVNTRTPESNPLKYLLSKNECEILSMVR 255
+ + P+G+ +TQ++ + ++T P + +K L + E + +VR
Sbjct: 302 IFVEPEGK-DTQEY-YLNGLSTSLPYAAQIKMLRTIPGLENVKIVR 345
>sp|B5XTQ9|GLGC_KLEP3 Glucose-1-phosphate adenylyltransferase OS=Klebsiella pneumoniae
(strain 342) GN=glgC PE=3 SV=1
Length = 431
Score = 32.7 bits (73), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 20/89 (22%)
Query: 33 MRTNGIFLF----LLRLLDPEINRFKNTDLDFSQ----LFTEESTFYINNIFPIATAPFP 84
+ + GI++F L LL+ E +R +N+ DF + TE Y + PFP
Sbjct: 210 LASMGIYIFDAAYLYELLE-EDDRNENSSHDFGKDIIPKITEAGMAYAH--------PFP 260
Query: 85 LVCIKGNEFGHPEWLDFPRAGNNSSYWHA 113
L C++ + P W D G +YW A
Sbjct: 261 LSCVQSDPNAEPYWRD---VGTLEAYWKA 286
>sp|A6TF49|GLGC_KLEP7 Glucose-1-phosphate adenylyltransferase OS=Klebsiella pneumoniae
subsp. pneumoniae (strain ATCC 700721 / MGH 78578)
GN=glgC PE=3 SV=1
Length = 431
Score = 32.3 bits (72), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 20/89 (22%)
Query: 33 MRTNGIFLF----LLRLLDPEINRFKNTDLDFSQ----LFTEESTFYINNIFPIATAPFP 84
+ + GI++F L LL+ E +R +N+ DF + TE Y + PFP
Sbjct: 210 LASMGIYVFDAAYLYELLE-EDDRNENSSHDFGKDIIPKITEAGMAYAH--------PFP 260
Query: 85 LVCIKGNEFGHPEWLDFPRAGNNSSYWHA 113
L C++ + P W D G +YW A
Sbjct: 261 LSCVQSDPNAEPYWRD---VGTLEAYWKA 286
>sp|Q1R5J6|GLGC_ECOUT Glucose-1-phosphate adenylyltransferase OS=Escherichia coli (strain
UTI89 / UPEC) GN=glgC PE=3 SV=2
Length = 431
Score = 32.3 bits (72), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 43/95 (45%), Gaps = 21/95 (22%)
Query: 28 NRAGK-MRTNGIFLF----LLRLLDPEINRFKNTDLDFSQ----LFTEESTFYINNIFPI 78
N GK + + GI++F L LL+ E +R +N+ DF + TE Y +
Sbjct: 204 NDPGKSLASMGIYVFDADYLYELLE-EDDRDENSSHDFGKDLIPKITEAGLAYAH----- 257
Query: 79 ATAPFPLVCIKGNEFGHPEWLDFPRAGNNSSYWHA 113
PFPL C++ + P W D G +YW A
Sbjct: 258 ---PFPLSCVQSDPDAEPYWRD---VGTLEAYWKA 286
>sp|B7MDR5|GLGC_ECO45 Glucose-1-phosphate adenylyltransferase OS=Escherichia coli O45:K1
(strain S88 / ExPEC) GN=glgC PE=3 SV=1
Length = 431
Score = 32.3 bits (72), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 43/95 (45%), Gaps = 21/95 (22%)
Query: 28 NRAGK-MRTNGIFLF----LLRLLDPEINRFKNTDLDFSQ----LFTEESTFYINNIFPI 78
N GK + + GI++F L LL+ E +R +N+ DF + TE Y +
Sbjct: 204 NDPGKSLASMGIYVFDADYLYELLE-EDDRDENSSHDFGKDLIPKITEAGLAYAH----- 257
Query: 79 ATAPFPLVCIKGNEFGHPEWLDFPRAGNNSSYWHA 113
PFPL C++ + P W D G +YW A
Sbjct: 258 ---PFPLSCVQSDPDAEPYWRD---VGTLEAYWKA 286
>sp|Q31VJ3|GLGC_SHIBS Glucose-1-phosphate adenylyltransferase OS=Shigella boydii serotype
4 (strain Sb227) GN=glgC PE=3 SV=1
Length = 431
Score = 32.3 bits (72), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 20/89 (22%)
Query: 33 MRTNGIFLF----LLRLLDPEINRFKNTDLDFSQ----LFTEESTFYINNIFPIATAPFP 84
+ + GI++F L LL+ E +R +N+ DF + TE Y + PFP
Sbjct: 210 LASMGIYVFDADYLYELLE-EDDRDENSSHDFGKDLIPKITEAGLAYAH--------PFP 260
Query: 85 LVCIKGNEFGHPEWLDFPRAGNNSSYWHA 113
L C++ + P W D G +YW A
Sbjct: 261 LSCVQSDPDAEPYWRD---VGTLKAYWKA 286
>sp|B2U4G2|GLGC_SHIB3 Glucose-1-phosphate adenylyltransferase OS=Shigella boydii serotype
18 (strain CDC 3083-94 / BS512) GN=glgC PE=3 SV=1
Length = 431
Score = 32.3 bits (72), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 20/89 (22%)
Query: 33 MRTNGIFLF----LLRLLDPEINRFKNTDLDFSQ----LFTEESTFYINNIFPIATAPFP 84
+ + GI++F L LL+ E +R +N+ DF + TE Y + PFP
Sbjct: 210 LASMGIYVFDADYLYELLE-EDDRDENSSHDFGKDLIPKITEAGLAYAH--------PFP 260
Query: 85 LVCIKGNEFGHPEWLDFPRAGNNSSYWHA 113
L C++ + P W D G +YW A
Sbjct: 261 LSCVQSDPDAEPYWRD---VGTLKAYWKA 286
>sp|Q3YW95|GLGC_SHISS Glucose-1-phosphate adenylyltransferase OS=Shigella sonnei (strain
Ss046) GN=glgC PE=3 SV=1
Length = 431
Score = 32.3 bits (72), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 20/89 (22%)
Query: 33 MRTNGIFLF----LLRLLDPEINRFKNTDLDFSQ----LFTEESTFYINNIFPIATAPFP 84
+ + GI++F L LL+ E +R +N+ DF + TE Y + PFP
Sbjct: 210 LASMGIYVFDADYLYELLE-EDDRDENSSHDFGKDLIPKITEAGLAYAH--------PFP 260
Query: 85 LVCIKGNEFGHPEWLDFPRAGNNSSYWHA 113
L C++ + P W D G +YW A
Sbjct: 261 LSCVQSDPDAEPYWRD---VGTLEAYWKA 286
>sp|P0A6V4|GLGC_SHIFL Glucose-1-phosphate adenylyltransferase OS=Shigella flexneri
GN=glgC PE=3 SV=2
Length = 431
Score = 32.3 bits (72), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 20/89 (22%)
Query: 33 MRTNGIFLF----LLRLLDPEINRFKNTDLDFSQ----LFTEESTFYINNIFPIATAPFP 84
+ + GI++F L LL+ E +R +N+ DF + TE Y + PFP
Sbjct: 210 LASMGIYVFDADYLYELLE-EDDRDENSSHDFGKDLIPKITEAGLAYAH--------PFP 260
Query: 85 LVCIKGNEFGHPEWLDFPRAGNNSSYWHA 113
L C++ + P W D G +YW A
Sbjct: 261 LSCVQSDPDAEPYWRD---VGTLEAYWKA 286
>sp|Q0SZN4|GLGC_SHIF8 Glucose-1-phosphate adenylyltransferase OS=Shigella flexneri
serotype 5b (strain 8401) GN=glgC PE=3 SV=1
Length = 431
Score = 32.3 bits (72), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 20/89 (22%)
Query: 33 MRTNGIFLF----LLRLLDPEINRFKNTDLDFSQ----LFTEESTFYINNIFPIATAPFP 84
+ + GI++F L LL+ E +R +N+ DF + TE Y + PFP
Sbjct: 210 LASMGIYVFDADYLYELLE-EDDRDENSSHDFGKDLIPKITEAGLAYAH--------PFP 260
Query: 85 LVCIKGNEFGHPEWLDFPRAGNNSSYWHA 113
L C++ + P W D G +YW A
Sbjct: 261 LSCVQSDPDAEPYWRD---VGTLEAYWKA 286
>sp|Q32AV5|GLGC_SHIDS Glucose-1-phosphate adenylyltransferase OS=Shigella dysenteriae
serotype 1 (strain Sd197) GN=glgC PE=3 SV=1
Length = 431
Score = 32.3 bits (72), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 20/89 (22%)
Query: 33 MRTNGIFLF----LLRLLDPEINRFKNTDLDFSQ----LFTEESTFYINNIFPIATAPFP 84
+ + GI++F L LL+ E +R +N+ DF + TE Y + PFP
Sbjct: 210 LASMGIYVFDADYLYELLE-EDDRDENSSHDFGKDLIPKITEAGLAYAH--------PFP 260
Query: 85 LVCIKGNEFGHPEWLDFPRAGNNSSYWHA 113
L C++ + P W D G +YW A
Sbjct: 261 LSCVQSDPDAEPYWRD---VGTLEAYWKA 286
>sp|B1LI91|GLGC_ECOSM Glucose-1-phosphate adenylyltransferase OS=Escherichia coli (strain
SMS-3-5 / SECEC) GN=glgC PE=3 SV=1
Length = 431
Score = 32.3 bits (72), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 20/89 (22%)
Query: 33 MRTNGIFLF----LLRLLDPEINRFKNTDLDFSQ----LFTEESTFYINNIFPIATAPFP 84
+ + GI++F L LL+ E +R +N+ DF + TE Y + PFP
Sbjct: 210 LASMGIYVFDADYLYELLE-EDDRDENSSHDFGKDLIPKITEAGLAYAH--------PFP 260
Query: 85 LVCIKGNEFGHPEWLDFPRAGNNSSYWHA 113
L C++ + P W D G +YW A
Sbjct: 261 LSCVQSDPDAEPYWRD---VGTLEAYWKA 286
>sp|B6I2Z6|GLGC_ECOSE Glucose-1-phosphate adenylyltransferase OS=Escherichia coli (strain
SE11) GN=glgC PE=3 SV=1
Length = 431
Score = 32.3 bits (72), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 20/89 (22%)
Query: 33 MRTNGIFLF----LLRLLDPEINRFKNTDLDFSQ----LFTEESTFYINNIFPIATAPFP 84
+ + GI++F L LL+ E +R +N+ DF + TE Y + PFP
Sbjct: 210 LASMGIYVFDADYLYELLE-EDDRDENSSHDFGKDLIPKITEAGLAYAH--------PFP 260
Query: 85 LVCIKGNEFGHPEWLDFPRAGNNSSYWHA 113
L C++ + P W D G +YW A
Sbjct: 261 LSCVQSDPDAEPYWRD---VGTLEAYWKA 286
>sp|B7NE40|GLGC_ECOLU Glucose-1-phosphate adenylyltransferase OS=Escherichia coli
O17:K52:H18 (strain UMN026 / ExPEC) GN=glgC PE=3 SV=1
Length = 431
Score = 32.3 bits (72), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 20/89 (22%)
Query: 33 MRTNGIFLF----LLRLLDPEINRFKNTDLDFSQ----LFTEESTFYINNIFPIATAPFP 84
+ + GI++F L LL+ E +R +N+ DF + TE Y + PFP
Sbjct: 210 LASMGIYVFDADYLYELLE-EDDRDENSSHDFGKDLIPKITEAGLAYAH--------PFP 260
Query: 85 LVCIKGNEFGHPEWLDFPRAGNNSSYWHA 113
L C++ + P W D G +YW A
Sbjct: 261 LSCVQSDPDAEPYWRD---VGTLEAYWKA 286
>sp|P0A6V1|GLGC_ECOLI Glucose-1-phosphate adenylyltransferase OS=Escherichia coli (strain
K12) GN=glgC PE=1 SV=2
Length = 431
Score = 32.3 bits (72), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 20/89 (22%)
Query: 33 MRTNGIFLF----LLRLLDPEINRFKNTDLDFSQ----LFTEESTFYINNIFPIATAPFP 84
+ + GI++F L LL+ E +R +N+ DF + TE Y + PFP
Sbjct: 210 LASMGIYVFDADYLYELLE-EDDRDENSSHDFGKDLIPKITEAGLAYAH--------PFP 260
Query: 85 LVCIKGNEFGHPEWLDFPRAGNNSSYWHA 113
L C++ + P W D G +YW A
Sbjct: 261 LSCVQSDPDAEPYWRD---VGTLEAYWKA 286
>sp|B1IP34|GLGC_ECOLC Glucose-1-phosphate adenylyltransferase OS=Escherichia coli (strain
ATCC 8739 / DSM 1576 / Crooks) GN=glgC PE=3 SV=1
Length = 431
Score = 32.3 bits (72), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 20/89 (22%)
Query: 33 MRTNGIFLF----LLRLLDPEINRFKNTDLDFSQ----LFTEESTFYINNIFPIATAPFP 84
+ + GI++F L LL+ E +R +N+ DF + TE Y + PFP
Sbjct: 210 LASMGIYVFDADYLYELLE-EDDRDENSSHDFGKDLIPKITEAGLAYAH--------PFP 260
Query: 85 LVCIKGNEFGHPEWLDFPRAGNNSSYWHA 113
L C++ + P W D G +YW A
Sbjct: 261 LSCVQSDPDAEPYWRD---VGTLEAYWKA 286
>sp|P0A6V2|GLGC_ECOL6 Glucose-1-phosphate adenylyltransferase OS=Escherichia coli O6:H1
(strain CFT073 / ATCC 700928 / UPEC) GN=glgC PE=3 SV=2
Length = 431
Score = 32.3 bits (72), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 20/89 (22%)
Query: 33 MRTNGIFLF----LLRLLDPEINRFKNTDLDFSQ----LFTEESTFYINNIFPIATAPFP 84
+ + GI++F L LL+ E +R +N+ DF + TE Y + PFP
Sbjct: 210 LASMGIYVFDADYLYELLE-EDDRDENSSHDFGKDLIPKITEAGLAYAH--------PFP 260
Query: 85 LVCIKGNEFGHPEWLDFPRAGNNSSYWHA 113
L C++ + P W D G +YW A
Sbjct: 261 LSCVQSDPDAEPYWRD---VGTLEAYWKA 286
>sp|Q0TC29|GLGC_ECOL5 Glucose-1-phosphate adenylyltransferase OS=Escherichia coli
O6:K15:H31 (strain 536 / UPEC) GN=glgC PE=3 SV=1
Length = 431
Score = 32.3 bits (72), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 20/89 (22%)
Query: 33 MRTNGIFLF----LLRLLDPEINRFKNTDLDFSQ----LFTEESTFYINNIFPIATAPFP 84
+ + GI++F L LL+ E +R +N+ DF + TE Y + PFP
Sbjct: 210 LASMGIYVFDADYLYELLE-EDDRDENSSHDFGKDLIPKITEAGLAYAH--------PFP 260
Query: 85 LVCIKGNEFGHPEWLDFPRAGNNSSYWHA 113
L C++ + P W D G +YW A
Sbjct: 261 LSCVQSDPDAEPYWRD---VGTLEAYWKA 286
>sp|A8A5P0|GLGC_ECOHS Glucose-1-phosphate adenylyltransferase OS=Escherichia coli O9:H4
(strain HS) GN=glgC PE=3 SV=1
Length = 431
Score = 32.3 bits (72), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 20/89 (22%)
Query: 33 MRTNGIFLF----LLRLLDPEINRFKNTDLDFSQ----LFTEESTFYINNIFPIATAPFP 84
+ + GI++F L LL+ E +R +N+ DF + TE Y + PFP
Sbjct: 210 LASMGIYVFDADYLYELLE-EDDRDENSSHDFGKDLIPKITEAGLAYAH--------PFP 260
Query: 85 LVCIKGNEFGHPEWLDFPRAGNNSSYWHA 113
L C++ + P W D G +YW A
Sbjct: 261 LSCVQSDPDAEPYWRD---VGTLEAYWKA 286
>sp|B1X775|GLGC_ECODH Glucose-1-phosphate adenylyltransferase OS=Escherichia coli (strain
K12 / DH10B) GN=glgC PE=3 SV=1
Length = 431
Score = 32.3 bits (72), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 20/89 (22%)
Query: 33 MRTNGIFLF----LLRLLDPEINRFKNTDLDFSQ----LFTEESTFYINNIFPIATAPFP 84
+ + GI++F L LL+ E +R +N+ DF + TE Y + PFP
Sbjct: 210 LASMGIYVFDADYLYELLE-EDDRDENSSHDFGKDLIPKITEAGLAYAH--------PFP 260
Query: 85 LVCIKGNEFGHPEWLDFPRAGNNSSYWHA 113
L C++ + P W D G +YW A
Sbjct: 261 LSCVQSDPDAEPYWRD---VGTLEAYWKA 286
>sp|C4ZVY0|GLGC_ECOBW Glucose-1-phosphate adenylyltransferase OS=Escherichia coli (strain
K12 / MC4100 / BW2952) GN=glgC PE=3 SV=1
Length = 431
Score = 32.3 bits (72), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 20/89 (22%)
Query: 33 MRTNGIFLF----LLRLLDPEINRFKNTDLDFSQ----LFTEESTFYINNIFPIATAPFP 84
+ + GI++F L LL+ E +R +N+ DF + TE Y + PFP
Sbjct: 210 LASMGIYVFDADYLYELLE-EDDRDENSSHDFGKDLIPKITEAGLAYAH--------PFP 260
Query: 85 LVCIKGNEFGHPEWLDFPRAGNNSSYWHA 113
L C++ + P W D G +YW A
Sbjct: 261 LSCVQSDPDAEPYWRD---VGTLEAYWKA 286
>sp|B7M2J3|GLGC_ECO8A Glucose-1-phosphate adenylyltransferase OS=Escherichia coli O8
(strain IAI1) GN=glgC PE=3 SV=1
Length = 431
Score = 32.3 bits (72), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 20/89 (22%)
Query: 33 MRTNGIFLF----LLRLLDPEINRFKNTDLDFSQ----LFTEESTFYINNIFPIATAPFP 84
+ + GI++F L LL+ E +R +N+ DF + TE Y + PFP
Sbjct: 210 LASMGIYVFDADYLYELLE-EDDRDENSSHDFGKDLIPKITEAGLAYAH--------PFP 260
Query: 85 LVCIKGNEFGHPEWLDFPRAGNNSSYWHA 113
L C++ + P W D G +YW A
Sbjct: 261 LSCVQSDPDAEPYWRD---VGTLEAYWKA 286
>sp|B7N1M2|GLGC_ECO81 Glucose-1-phosphate adenylyltransferase OS=Escherichia coli O81
(strain ED1a) GN=glgC PE=3 SV=1
Length = 431
Score = 32.3 bits (72), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 20/89 (22%)
Query: 33 MRTNGIFLF----LLRLLDPEINRFKNTDLDFSQ----LFTEESTFYINNIFPIATAPFP 84
+ + GI++F L LL+ E +R +N+ DF + TE Y + PFP
Sbjct: 210 LASMGIYVFDADYLYELLE-EDDRDENSSHDFGKDLIPKITEAGLAYAH--------PFP 260
Query: 85 LVCIKGNEFGHPEWLDFPRAGNNSSYWHA 113
L C++ + P W D G +YW A
Sbjct: 261 LSCVQSDPDAEPYWRD---VGTLEAYWKA 286
>sp|B5YUI6|GLGC_ECO5E Glucose-1-phosphate adenylyltransferase OS=Escherichia coli O157:H7
(strain EC4115 / EHEC) GN=glgC PE=3 SV=1
Length = 431
Score = 32.3 bits (72), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 20/89 (22%)
Query: 33 MRTNGIFLF----LLRLLDPEINRFKNTDLDFSQ----LFTEESTFYINNIFPIATAPFP 84
+ + GI++F L LL+ E +R +N+ DF + TE Y + PFP
Sbjct: 210 LASMGIYVFDADYLYELLE-EDDRDENSSHDFGKDLIPKITEAGLAYAH--------PFP 260
Query: 85 LVCIKGNEFGHPEWLDFPRAGNNSSYWHA 113
L C++ + P W D G +YW A
Sbjct: 261 LSCVQSDPDAEPYWRD---VGTLEAYWKA 286
>sp|P0A6V3|GLGC_ECO57 Glucose-1-phosphate adenylyltransferase OS=Escherichia coli O157:H7
GN=glgC PE=3 SV=2
Length = 431
Score = 32.3 bits (72), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 20/89 (22%)
Query: 33 MRTNGIFLF----LLRLLDPEINRFKNTDLDFSQ----LFTEESTFYINNIFPIATAPFP 84
+ + GI++F L LL+ E +R +N+ DF + TE Y + PFP
Sbjct: 210 LASMGIYVFDADYLYELLE-EDDRDENSSHDFGKDLIPKITEAGLAYAH--------PFP 260
Query: 85 LVCIKGNEFGHPEWLDFPRAGNNSSYWHA 113
L C++ + P W D G +YW A
Sbjct: 261 LSCVQSDPDAEPYWRD---VGTLEAYWKA 286
>sp|B7L4W0|GLGC_ECO55 Glucose-1-phosphate adenylyltransferase OS=Escherichia coli (strain
55989 / EAEC) GN=glgC PE=3 SV=1
Length = 431
Score = 32.3 bits (72), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 20/89 (22%)
Query: 33 MRTNGIFLF----LLRLLDPEINRFKNTDLDFSQ----LFTEESTFYINNIFPIATAPFP 84
+ + GI++F L LL+ E +R +N+ DF + TE Y + PFP
Sbjct: 210 LASMGIYVFDADYLYELLE-EDDRDENSSHDFGKDLIPKITEAGLAYAH--------PFP 260
Query: 85 LVCIKGNEFGHPEWLDFPRAGNNSSYWHA 113
L C++ + P W D G +YW A
Sbjct: 261 LSCVQSDPDAEPYWRD---VGTLEAYWKA 286
>sp|A7ZSW3|GLGC_ECO24 Glucose-1-phosphate adenylyltransferase OS=Escherichia coli
O139:H28 (strain E24377A / ETEC) GN=glgC PE=3 SV=1
Length = 431
Score = 32.3 bits (72), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 20/89 (22%)
Query: 33 MRTNGIFLF----LLRLLDPEINRFKNTDLDFSQ----LFTEESTFYINNIFPIATAPFP 84
+ + GI++F L LL+ E +R +N+ DF + TE Y + PFP
Sbjct: 210 LASMGIYVFDADYLYELLE-EDDRDENSSHDFGKDLIPKITEAGLAYAH--------PFP 260
Query: 85 LVCIKGNEFGHPEWLDFPRAGNNSSYWHA 113
L C++ + P W D G +YW A
Sbjct: 261 LSCVQSDPDAEPYWRD---VGTLEAYWKA 286
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.136 0.439
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 107,703,121
Number of Sequences: 539616
Number of extensions: 4781306
Number of successful extensions: 7490
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 7464
Number of HSP's gapped (non-prelim): 54
length of query: 258
length of database: 191,569,459
effective HSP length: 115
effective length of query: 143
effective length of database: 129,513,619
effective search space: 18520447517
effective search space used: 18520447517
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)