BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9025
(361 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P55934|CNG_ICTPU Cyclic nucleotide-gated cation channel OS=Ictalurus punctatus PE=2
SV=1
Length = 682
Score = 194 bits (492), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 95/174 (54%), Positives = 130/174 (74%), Gaps = 6/174 (3%)
Query: 93 DENKILNNLPLKLKTDVAINVHIQTLSKVQLFQDCDEALLRELVLKLRPVLYLPGDYICR 152
DE ++L NLP KL+ ++AINVH+ TL KV++FQDC+ LL ELVLKLRP +Y PGDYICR
Sbjct: 417 DEQEVLKNLPDKLRAEIAINVHLDTLKKVRIFQDCEAGLLVELVLKLRPQVYSPGDYICR 476
Query: 153 KGEVGKEMYIVKTGQVQVVS--GETVLATLTEGSVFGEISLLALAGT---NRRTADVRSH 207
KG++GKEMYI+K GQ+ VV+ G T A LT G FGEIS+L + G+ NRRTA++RS
Sbjct: 477 KGDIGKEMYIIKEGQLAVVADDGVTQFALLTAGGCFGEISILNIQGSKMGNRRTANIRSI 536
Query: 208 GFSNLFVLNKDDLNEAIEYYPNAQEVLKKKARQLI-KENAARERVSQPKLSTMD 260
G+S+LF L+KDDL EA+ YP+AQ+VL+++ R+++ K+ E V+ L +D
Sbjct: 537 GYSDLFCLSKDDLMEAVAEYPDAQKVLEERGREILRKQGLLDESVAAGGLGVID 590
>sp|Q14028|CNGB1_HUMAN Cyclic nucleotide-gated cation channel beta-1 OS=Homo sapiens
GN=CNGB1 PE=1 SV=2
Length = 1251
Score = 189 bits (479), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 83/156 (53%), Positives = 125/156 (80%), Gaps = 3/156 (1%)
Query: 93 DENKILNNLPLKLKTDVAINVHIQTLSKVQLFQDCDEALLRELVLKLRPVLYLPGDYICR 152
DE++++ LP K++ D+AI+V+ +SKV LFQ CD ++ +++ +LR V+YLP DY+C+
Sbjct: 932 DESELMVQLPDKMRLDLAIDVNYNIVSKVALFQGCDRQMIFDMLKRLRSVVYLPNDYVCK 991
Query: 153 KGEVGKEMYIVKTGQVQVVSG---ETVLATLTEGSVFGEISLLALAGTNRRTADVRSHGF 209
KGE+G+EMYI++ GQVQV+ G ++VL TL GSVFGEISLLA+ G NRRTA+V +HGF
Sbjct: 992 KGEIGREMYIIQAGQVQVLGGPDGKSVLVTLKAGSVFGEISLLAVGGGNRRTANVVAHGF 1051
Query: 210 SNLFVLNKDDLNEAIEYYPNAQEVLKKKARQLIKEN 245
+NLF+L+K DLNE + +YP +Q++L+KKAR++++ N
Sbjct: 1052 TNLFILDKKDLNEILVHYPESQKLLRKKARRMLRSN 1087
>sp|Q28181|CNGB1_BOVIN Cyclic nucleotide-gated cation channel beta-1 OS=Bos taurus GN=CNGB1
PE=1 SV=1
Length = 1394
Score = 189 bits (479), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 83/156 (53%), Positives = 125/156 (80%), Gaps = 3/156 (1%)
Query: 93 DENKILNNLPLKLKTDVAINVHIQTLSKVQLFQDCDEALLRELVLKLRPVLYLPGDYICR 152
DE++++ LP K++ D+AI+V+ +SKV LFQ CD ++ +++ +LR V+YLP DY+C+
Sbjct: 1046 DESELMVQLPDKMRLDLAIDVNYSIVSKVALFQGCDRQMIFDMLKRLRSVVYLPNDYVCK 1105
Query: 153 KGEVGKEMYIVKTGQVQVVSG---ETVLATLTEGSVFGEISLLALAGTNRRTADVRSHGF 209
KGE+G+EMYI++ GQVQV+ G ++VL TL GSVFGEISLLA+ G NRRTA+V +HGF
Sbjct: 1106 KGEIGREMYIIQAGQVQVLGGPDGKSVLVTLKAGSVFGEISLLAVGGGNRRTANVVAHGF 1165
Query: 210 SNLFVLNKDDLNEAIEYYPNAQEVLKKKARQLIKEN 245
+NLF+L+K DLNE + +YP +Q++L+KKAR++++ N
Sbjct: 1166 TNLFILDKKDLNEILVHYPESQKLLRKKARRMLRNN 1201
>sp|Q9JJZ8|CNGA3_MOUSE Cyclic nucleotide-gated cation channel alpha-3 OS=Mus musculus
GN=Cnga3 PE=1 SV=2
Length = 631
Score = 188 bits (478), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 92/175 (52%), Positives = 130/175 (74%), Gaps = 6/175 (3%)
Query: 93 DENKILNNLPLKLKTDVAINVHIQTLSKVQLFQDCDEALLRELVLKLRPVLYLPGDYICR 152
DE ++L NLP KLK ++AINVH+ TL KV++FQDC+ LL ELVLKLRP ++ PGDYIC+
Sbjct: 393 DEKEVLKNLPDKLKAEIAINVHLDTLKKVRIFQDCEAGLLVELVLKLRPTVFSPGDYICK 452
Query: 153 KGEVGKEMYIVKTGQVQVVS--GETVLATLTEGSVFGEISLLALAGT---NRRTADVRSH 207
KG++G+EMYI+K G++ VV+ G T L++GS FGEIS+L + G+ NRRTA++RS
Sbjct: 453 KGDIGREMYIIKEGKLAVVADDGVTQFVVLSDGSYFGEISILNIKGSKSGNRRTANIRSI 512
Query: 208 GFSNLFVLNKDDLNEAIEYYPNAQEVLKKKARQ-LIKENAARERVSQPKLSTMDA 261
G+S+LF L+KDDL EA+ YP+A+ L++K RQ L+K+N E + ++ T D
Sbjct: 513 GYSDLFCLSKDDLMEALTEYPDAKRALEEKGRQILMKDNLIDEDLVAARVDTRDV 567
>sp|Q03041|CNGA2_BOVIN Cyclic nucleotide-gated olfactory channel OS=Bos taurus GN=CNGA2
PE=1 SV=1
Length = 663
Score = 187 bits (474), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 93/182 (51%), Positives = 131/182 (71%), Gaps = 12/182 (6%)
Query: 66 ERAQKIKRILDFPPTPSSSTTLSSSSEDENKILNNLPLKLKTDVAINVHIQTLSKVQLFQ 125
E K+ R D+ T + S DE ++L NLP KL+ ++AINVH+ TL KV++FQ
Sbjct: 404 EMEAKVIRWFDYLWT-------NKKSVDEREVLKNLPAKLRAEIAINVHLSTLKKVRIFQ 456
Query: 126 DCDEALLRELVLKLRPVLYLPGDYICRKGEVGKEMYIVKTGQVQVVS--GETVLATLTEG 183
DC+ LL ELVLKLRP ++ PGDYICRKG++GKEMYI+K G++ VV+ G T A L+ G
Sbjct: 457 DCEAGLLVELVLKLRPQVFSPGDYICRKGDIGKEMYIIKEGKLAVVADDGVTQYALLSAG 516
Query: 184 SVFGEISLLALAGT---NRRTADVRSHGFSNLFVLNKDDLNEAIEYYPNAQEVLKKKARQ 240
S FGEIS+L + G+ NRRTA++RS G+S+LF L+KDDL EA+ YP+A+ VL+++ R+
Sbjct: 517 SCFGEISILNIKGSKMGNRRTANIRSLGYSDLFCLSKDDLMEAVTEYPDAKRVLEERGRE 576
Query: 241 LI 242
++
Sbjct: 577 IL 578
>sp|Q28718|CNGA2_RABIT Cyclic nucleotide-gated olfactory channel OS=Oryctolagus cuniculus
GN=CNGA2 PE=2 SV=1
Length = 664
Score = 185 bits (470), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 87/155 (56%), Positives = 123/155 (79%), Gaps = 5/155 (3%)
Query: 93 DENKILNNLPLKLKTDVAINVHIQTLSKVQLFQDCDEALLRELVLKLRPVLYLPGDYICR 152
DE ++L NLP KL+ ++AINVH+ TL KV++FQDC+ LL ELVLKLRP ++ PGDYICR
Sbjct: 424 DEREVLKNLPAKLRAEIAINVHLSTLKKVRIFQDCEAGLLVELVLKLRPQVFSPGDYICR 483
Query: 153 KGEVGKEMYIVKTGQVQVVS--GETVLATLTEGSVFGEISLLALAGT---NRRTADVRSH 207
KG++GKEMYI+K G++ VV+ G T A L+ GS FGEIS+L + G+ NRRTA++RS
Sbjct: 484 KGDIGKEMYIIKEGKLAVVADDGVTQYALLSAGSCFGEISILNIKGSKMGNRRTANIRSL 543
Query: 208 GFSNLFVLNKDDLNEAIEYYPNAQEVLKKKARQLI 242
G+S+LF L+KDDL EA+ YP+A++VL+++ R+++
Sbjct: 544 GYSDLFCLSKDDLMEAVTEYPDAKKVLEERGREIL 578
>sp|Q00195|CNGA2_RAT Cyclic nucleotide-gated olfactory channel OS=Rattus norvegicus
GN=Cnga2 PE=2 SV=1
Length = 664
Score = 185 bits (469), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 91/163 (55%), Positives = 126/163 (77%), Gaps = 6/163 (3%)
Query: 93 DENKILNNLPLKLKTDVAINVHIQTLSKVQLFQDCDEALLRELVLKLRPVLYLPGDYICR 152
DE ++L NLP KL+ ++AINVH+ TL KV++FQDC+ LL ELVLKLRP ++ PGDYICR
Sbjct: 426 DEREVLKNLPAKLRAEIAINVHLSTLKKVRIFQDCEAGLLVELVLKLRPQVFSPGDYICR 485
Query: 153 KGEVGKEMYIVKTGQVQVVS--GETVLATLTEGSVFGEISLLALAGT---NRRTADVRSH 207
KG++GKEMYI+K G++ VV+ G T A L+ GS FGEIS+L + G+ NRRTA++RS
Sbjct: 486 KGDIGKEMYIIKEGKLAVVADDGVTQYALLSAGSCFGEISILNIKGSKMGNRRTANIRSL 545
Query: 208 GFSNLFVLNKDDLNEAIEYYPNAQEVLKKKARQ-LIKENAARE 249
G+S+LF L+KDDL EA+ YP+A++VL+++ R+ L+KE E
Sbjct: 546 GYSDLFCLSKDDLMEAVTEYPDAKKVLEERGREILMKEGLLDE 588
>sp|Q62398|CNGA2_MOUSE Cyclic nucleotide-gated olfactory channel OS=Mus musculus GN=Cnga2
PE=2 SV=2
Length = 664
Score = 184 bits (468), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 91/163 (55%), Positives = 126/163 (77%), Gaps = 6/163 (3%)
Query: 93 DENKILNNLPLKLKTDVAINVHIQTLSKVQLFQDCDEALLRELVLKLRPVLYLPGDYICR 152
DE ++L NLP KL+ ++AINVH+ TL KV++FQDC+ LL ELVLKLRP ++ PGDYICR
Sbjct: 426 DEREVLKNLPAKLRAEIAINVHLSTLKKVRIFQDCEAGLLVELVLKLRPQVFSPGDYICR 485
Query: 153 KGEVGKEMYIVKTGQVQVVS--GETVLATLTEGSVFGEISLLALAGT---NRRTADVRSH 207
KG++GKEMYI+K G++ VV+ G T A L+ GS FGEIS+L + G+ NRRTA++RS
Sbjct: 486 KGDIGKEMYIIKEGKLAVVADDGVTQYALLSAGSCFGEISILNIKGSKMGNRRTANIRSL 545
Query: 208 GFSNLFVLNKDDLNEAIEYYPNAQEVLKKKARQ-LIKENAARE 249
G+S+LF L+KDDL EA+ YP+A++VL+++ R+ L+KE E
Sbjct: 546 GYSDLFCLSKDDLMEAVTEYPDAKKVLEERGREILMKEGLLDE 588
>sp|Q16280|CNGA2_HUMAN Cyclic nucleotide-gated olfactory channel OS=Homo sapiens GN=CNGA2
PE=2 SV=2
Length = 664
Score = 184 bits (466), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 95/186 (51%), Positives = 133/186 (71%), Gaps = 13/186 (6%)
Query: 70 KIKRILDFPPTPSSSTTLSSSSEDENKILNNLPLKLKTDVAINVHIQTLSKVQLFQDCDE 129
K+ R D+ T + + DE +IL NLP KL+ ++AINVH+ TL KV++F DC+
Sbjct: 408 KVIRWFDYLWT-------NKKTVDEREILKNLPAKLRAEIAINVHLSTLKKVRIFHDCEA 460
Query: 130 ALLRELVLKLRPVLYLPGDYICRKGEVGKEMYIVKTGQVQVVS--GETVLATLTEGSVFG 187
LL ELVLKLRP ++ PGDYICRKG++GKEMYI+K G++ VV+ G T A L+ GS FG
Sbjct: 461 GLLVELVLKLRPQVFSPGDYICRKGDIGKEMYIIKEGKLAVVADDGVTQYALLSAGSCFG 520
Query: 188 EISLLALAGT---NRRTADVRSHGFSNLFVLNKDDLNEAIEYYPNAQEVLKKKARQ-LIK 243
EIS+L + G+ NRRTA++RS G+S+LF L+KDDL EA+ YP+A++VL+++ R+ L+K
Sbjct: 521 EISILNIKGSKMGNRRTANIRSLGYSDLFCLSKDDLMEAVTEYPDAKKVLEERGREILMK 580
Query: 244 ENAARE 249
E E
Sbjct: 581 EGLLDE 586
>sp|Q90805|CNG1_CHICK Cyclic nucleotide-gated channel cone photoreceptor subunit alpha
OS=Gallus gallus PE=2 SV=1
Length = 735
Score = 183 bits (465), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 89/167 (53%), Positives = 127/167 (76%), Gaps = 6/167 (3%)
Query: 93 DENKILNNLPLKLKTDVAINVHIQTLSKVQLFQDCDEALLRELVLKLRPVLYLPGDYICR 152
DE ++L NLP KLK ++AINVH+ TL KV++FQDC+ LL ELVLKL+P ++ PGDYIC+
Sbjct: 494 DEKEVLKNLPDKLKAEIAINVHLDTLKKVRIFQDCEAGLLIELVLKLKPTVFSPGDYICK 553
Query: 153 KGEVGKEMYIVKTGQVQVVS--GETVLATLTEGSVFGEISLLALAGT---NRRTADVRSH 207
KG++G+EMYI+K G++ VV+ G T L++GS FGEIS+L + G+ NRRTA++RS
Sbjct: 554 KGDIGREMYIIKEGKLAVVADDGITQFVVLSDGSYFGEISILNIKGSKSGNRRTANIRSI 613
Query: 208 GFSNLFVLNKDDLNEAIEYYPNAQEVLKKKARQ-LIKENAARERVSQ 253
G+S+LF L+KDDL EA+ YP A++ L++K RQ L+K+N E ++
Sbjct: 614 GYSDLFCLSKDDLMEALTEYPEAKKALEEKGRQILMKDNLIDEEAAK 660
>sp|Q16281|CNGA3_HUMAN Cyclic nucleotide-gated cation channel alpha-3 OS=Homo sapiens
GN=CNGA3 PE=1 SV=2
Length = 694
Score = 183 bits (464), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 89/167 (53%), Positives = 127/167 (76%), Gaps = 6/167 (3%)
Query: 93 DENKILNNLPLKLKTDVAINVHIQTLSKVQLFQDCDEALLRELVLKLRPVLYLPGDYICR 152
DE ++L +LP KLK ++AINVH+ TL KV++FQDC+ LL ELVLKLRP ++ PGDYIC+
Sbjct: 452 DEKEVLKSLPDKLKAEIAINVHLDTLKKVRIFQDCEAGLLVELVLKLRPTVFSPGDYICK 511
Query: 153 KGEVGKEMYIVKTGQVQVVS--GETVLATLTEGSVFGEISLLALAGT---NRRTADVRSH 207
KG++GKEMYI+ G++ VV+ G T L++GS FGEIS+L + G+ NRRTA++RS
Sbjct: 512 KGDIGKEMYIINEGKLAVVADDGVTQFVVLSDGSYFGEISILNIKGSKSGNRRTANIRSI 571
Query: 208 GFSNLFVLNKDDLNEAIEYYPNAQEVLKKKARQ-LIKENAARERVSQ 253
G+S+LF L+KDDL EA+ YP A++ L++K RQ L+K+N E +++
Sbjct: 572 GYSDLFCLSKDDLMEALTEYPEAKKALEEKGRQILMKDNLIDEELAR 618
>sp|Q29441|CNGA3_BOVIN Cyclic nucleotide-gated cation channel alpha-3 OS=Bos taurus
GN=CNGA3 PE=2 SV=1
Length = 706
Score = 182 bits (463), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 89/167 (53%), Positives = 127/167 (76%), Gaps = 6/167 (3%)
Query: 93 DENKILNNLPLKLKTDVAINVHIQTLSKVQLFQDCDEALLRELVLKLRPVLYLPGDYICR 152
DE ++L +LP KLK ++AINVH+ TL KV++FQDC+ LL ELVLKLRP ++ PGDYIC+
Sbjct: 471 DEKEVLKSLPDKLKAEIAINVHLDTLRKVRIFQDCEAGLLVELVLKLRPAVFSPGDYICK 530
Query: 153 KGEVGKEMYIVKTGQVQVVS--GETVLATLTEGSVFGEISLLALAGT---NRRTADVRSH 207
KG++G+EMYI+K G++ VV+ G T L +GS FGEIS+L + G+ NRRTA++RS
Sbjct: 531 KGDIGREMYIIKEGKLAVVAEDGITQFVVLGDGSYFGEISILNIKGSKSGNRRTANIRSI 590
Query: 208 GFSNLFVLNKDDLNEAIEYYPNAQEVLKKKARQ-LIKENAARERVSQ 253
G+S+LF L+KDDL EA+ YP A++ L++K RQ L+K+N E +++
Sbjct: 591 GYSDLFCLSKDDLMEALTEYPEAKKALEEKGRQILMKDNLIDEELAK 637
>sp|Q9NQW8|CNGB3_HUMAN Cyclic nucleotide-gated cation channel beta-3 OS=Homo sapiens
GN=CNGB3 PE=1 SV=2
Length = 809
Score = 179 bits (453), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 89/191 (46%), Positives = 128/191 (67%), Gaps = 7/191 (3%)
Query: 93 DENKILNNLPLKLKTDVAINVHIQTLSKVQLFQDCDEALLRELVLKLRPVLYLPGDYICR 152
DE+ +L LP ++ +AI+V+ +SKV LF+ CD ++ +++L+L+ VLYLPGD++C+
Sbjct: 494 DESDLLKTLPTTVQLALAIDVNFSIISKVDLFKGCDTQMIYDMLLRLKSVLYLPGDFVCK 553
Query: 153 KGEVGKEMYIVKTGQVQVVS---GETVLATLTEGSVFGEISLLALAGTNRRTADVRSHGF 209
KGE+GKEMYI+K G+VQV+ G VL TL GSVFGEISLLA G NRRTA+V +HGF
Sbjct: 554 KGEIGKEMYIIKHGEVQVLGGPDGTKVLVTLKAGSVFGEISLLAAGGGNRRTANVVAHGF 613
Query: 210 SNLFVLNKDDLNEAIEYYPNAQEVLKKKARQLIKENAARERVSQPKLSTMDASSVLLDRK 269
+NL L+K L E + +YP+++ +L KKAR L+K+ A + P+ ++L K
Sbjct: 614 ANLLTLDKKTLQEILVHYPDSERILMKKARVLLKQKAKTAEATPPRKDL----ALLFPPK 669
Query: 270 GEEPKQAPKLL 280
E PK LL
Sbjct: 670 EETPKLFKTLL 680
>sp|Q90980|CNG3_CHICK Cyclic nucleotide-gated channel rod photoreceptor subunit alpha
OS=Gallus gallus PE=2 SV=1
Length = 645
Score = 178 bits (451), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 87/193 (45%), Positives = 136/193 (70%), Gaps = 12/193 (6%)
Query: 59 HLAHVFTERAQKIKRILDFPPTPSSSTTLSSSSEDENKILNNLPLKLKTDVAINVHIQTL 118
H +V + +++ + D+ T + + DE ++L LP KL+ ++AINVH++TL
Sbjct: 374 HFRNVSKDMEKRVIKWFDYLWT-------NKKAVDEREVLKYLPDKLRAEIAINVHLETL 426
Query: 119 SKVQLFQDCDEALLRELVLKLRPVLYLPGDYICRKGEVGKEMYIVKTGQVQVVS--GETV 176
KV++F DC+ LL ELVLKL+P +Y PGDYICRKG++G+EMYI+K G++ VV+ G T
Sbjct: 427 KKVRIFADCEAGLLVELVLKLQPQVYSPGDYICRKGDIGREMYIIKEGKLAVVADDGVTQ 486
Query: 177 LATLTEGSVFGEISLLALAGT---NRRTADVRSHGFSNLFVLNKDDLNEAIEYYPNAQEV 233
L++GS FGEIS+L + G+ NRRTA++RS G+S+LF L+KDDL EA+ YP+A+ +
Sbjct: 487 FVVLSDGSYFGEISILNIKGSKAGNRRTANIRSIGYSDLFCLSKDDLMEALTEYPDAKAM 546
Query: 234 LKKKARQLIKENA 246
L++K +Q++ ++
Sbjct: 547 LEEKGKQILMKDG 559
>sp|P29973|CNGA1_HUMAN cGMP-gated cation channel alpha-1 OS=Homo sapiens GN=CNGA1 PE=1
SV=3
Length = 690
Score = 175 bits (444), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 85/193 (44%), Positives = 135/193 (69%), Gaps = 12/193 (6%)
Query: 59 HLAHVFTERAQKIKRILDFPPTPSSSTTLSSSSEDENKILNNLPLKLKTDVAINVHIQTL 118
H +V + +++ + D+ T + + DE ++L LP KL+ ++AINVH+ TL
Sbjct: 422 HFRNVSKDMEKRVIKWFDYLWT-------NKKTVDEKEVLKYLPDKLRAEIAINVHLDTL 474
Query: 119 SKVQLFQDCDEALLRELVLKLRPVLYLPGDYICRKGEVGKEMYIVKTGQVQVVS--GETV 176
KV++F DC+ LL ELVLKL+P +Y PGDYIC+KG++G+EMYI+K G++ VV+ G T
Sbjct: 475 KKVRIFADCEAGLLVELVLKLQPQVYSPGDYICKKGDIGREMYIIKEGKLAVVADDGVTQ 534
Query: 177 LATLTEGSVFGEISLLALAGT---NRRTADVRSHGFSNLFVLNKDDLNEAIEYYPNAQEV 233
L++GS FGEIS+L + G+ NRRTA+++S G+S+LF L+KDDL EA+ YP+A+ +
Sbjct: 535 FVVLSDGSYFGEISILNIKGSKAGNRRTANIKSIGYSDLFCLSKDDLMEALTEYPDAKTM 594
Query: 234 LKKKARQLIKENA 246
L++K +Q++ ++
Sbjct: 595 LEEKGKQILMKDG 607
>sp|Q28279|CNGA1_CANFA cGMP-gated cation channel alpha-1 OS=Canis familiaris GN=CNGA1 PE=2
SV=1
Length = 691
Score = 175 bits (443), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 85/193 (44%), Positives = 134/193 (69%), Gaps = 12/193 (6%)
Query: 59 HLAHVFTERAQKIKRILDFPPTPSSSTTLSSSSEDENKILNNLPLKLKTDVAINVHIQTL 118
H +V + +++ + D+ T + DE ++L LP KL+ ++AINVH+ TL
Sbjct: 421 HFRNVSKDMEKRVIKWFDYLWTNKKTV-------DEKEVLKYLPDKLRAEIAINVHLDTL 473
Query: 119 SKVQLFQDCDEALLRELVLKLRPVLYLPGDYICRKGEVGKEMYIVKTGQVQVVS--GETV 176
KV++F DC+ LL ELVLKL+P +Y PGDYIC+KG++G+EMYI+K G++ VV+ G T
Sbjct: 474 KKVRIFADCEAGLLVELVLKLQPQVYSPGDYICKKGDIGREMYIIKEGKLAVVADDGITQ 533
Query: 177 LATLTEGSVFGEISLLALAGT---NRRTADVRSHGFSNLFVLNKDDLNEAIEYYPNAQEV 233
L++GS FGEIS+L + G+ NRRTA+++S G+S+LF L+KDDL EA+ YP+A+ +
Sbjct: 534 FVVLSDGSYFGEISILNIKGSKAGNRRTANIKSIGYSDLFCLSKDDLMEALTEYPDAKTM 593
Query: 234 LKKKARQLIKENA 246
L++K +Q++ ++
Sbjct: 594 LEEKGKQILMKDG 606
>sp|P29974|CNGA1_MOUSE cGMP-gated cation channel alpha-1 OS=Mus musculus GN=Cnga1 PE=2
SV=2
Length = 684
Score = 175 bits (443), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 82/159 (51%), Positives = 122/159 (76%), Gaps = 5/159 (3%)
Query: 93 DENKILNNLPLKLKTDVAINVHIQTLSKVQLFQDCDEALLRELVLKLRPVLYLPGDYICR 152
DE ++L LP KL+ ++AINVH+ TL KV++F DC+ LL ELVLKL+P +Y PGDYIC+
Sbjct: 441 DEREVLRYLPDKLRAEIAINVHLDTLKKVRIFADCEAGLLVELVLKLQPQVYSPGDYICK 500
Query: 153 KGEVGKEMYIVKTGQVQVVS--GETVLATLTEGSVFGEISLLALAGT---NRRTADVRSH 207
KG++G+EMYI+K G++ VV+ G T L++GS FGEIS+L + G+ NRRTA+++S
Sbjct: 501 KGDIGREMYIIKEGKLAVVADDGITQFVVLSDGSYFGEISILNIKGSKAGNRRTANIKSI 560
Query: 208 GFSNLFVLNKDDLNEAIEYYPNAQEVLKKKARQLIKENA 246
G+S+LF L+KDDL EA+ YP+A+ +L++K RQ++ ++
Sbjct: 561 GYSDLFCLSKDDLMEALTEYPDAKTMLEEKGRQILMKDG 599
>sp|Q62927|CNGA1_RAT cGMP-gated cation channel alpha-1 OS=Rattus norvegicus GN=Cnga1
PE=2 SV=1
Length = 683
Score = 175 bits (443), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 82/159 (51%), Positives = 122/159 (76%), Gaps = 5/159 (3%)
Query: 93 DENKILNNLPLKLKTDVAINVHIQTLSKVQLFQDCDEALLRELVLKLRPVLYLPGDYICR 152
DE ++L LP KL+ ++AINVH+ TL KV++F DC+ LL ELVLKL+P +Y PGDYIC+
Sbjct: 440 DEREVLRYLPDKLRAEIAINVHLDTLKKVRIFADCEAGLLVELVLKLQPQVYSPGDYICK 499
Query: 153 KGEVGKEMYIVKTGQVQVVS--GETVLATLTEGSVFGEISLLALAGT---NRRTADVRSH 207
KG++G+EMYI+K G++ VV+ G T L++GS FGEIS+L + G+ NRRTA+++S
Sbjct: 500 KGDIGREMYIIKEGKLAVVADDGITQFVVLSDGSYFGEISILNIKGSKAGNRRTANIKSI 559
Query: 208 GFSNLFVLNKDDLNEAIEYYPNAQEVLKKKARQLIKENA 246
G+S+LF L+KDDL EA+ YP+A+ +L++K RQ++ ++
Sbjct: 560 GYSDLFCLSKDDLMEALTEYPDAKTMLEEKGRQILMKDG 598
>sp|Q00194|CNGA1_BOVIN cGMP-gated cation channel alpha-1 OS=Bos taurus GN=CNGA1 PE=1 SV=1
Length = 690
Score = 174 bits (441), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 85/193 (44%), Positives = 135/193 (69%), Gaps = 12/193 (6%)
Query: 59 HLAHVFTERAQKIKRILDFPPTPSSSTTLSSSSEDENKILNNLPLKLKTDVAINVHIQTL 118
H +V + +++ + D+ T + + DE ++L LP KL+ ++AINVH+ TL
Sbjct: 420 HFRNVSKDMEKRVIKWFDYLWT-------NKKTVDEREVLKYLPDKLRAEIAINVHLDTL 472
Query: 119 SKVQLFQDCDEALLRELVLKLRPVLYLPGDYICRKGEVGKEMYIVKTGQVQVVS--GETV 176
KV++F DC+ LL ELVLKL+P +Y PGDYIC+KG++G+EMYI+K G++ VV+ G T
Sbjct: 473 KKVRIFADCEAGLLVELVLKLQPQVYSPGDYICKKGDIGREMYIIKEGKLAVVADDGITQ 532
Query: 177 LATLTEGSVFGEISLLALAGT---NRRTADVRSHGFSNLFVLNKDDLNEAIEYYPNAQEV 233
L++GS FGEIS+L + G+ NRRTA+++S G+S+LF L+KDDL EA+ YP+A+ +
Sbjct: 533 FVVLSDGSYFGEISILNIKGSKAGNRRTANIKSIGYSDLFCLSKDDLMEALTEYPDAKGM 592
Query: 234 LKKKARQLIKENA 246
L++K +Q++ ++
Sbjct: 593 LEEKGKQILMKDG 605
>sp|Q8MJD7|CNGB3_CANFA Cyclic nucleotide-gated cation channel beta-3 OS=Canis familiaris
GN=CNGB3 PE=1 SV=1
Length = 782
Score = 171 bits (433), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 83/191 (43%), Positives = 128/191 (67%), Gaps = 7/191 (3%)
Query: 93 DENKILNNLPLKLKTDVAINVHIQTLSKVQLFQDCDEALLRELVLKLRPVLYLPGDYICR 152
DE+ +L LP+ ++ + ++V++ +SKV+LF+ CD ++ +++L+L+ +YLPGD++C+
Sbjct: 489 DESDLLCTLPVTMQLALTVDVNLSIISKVELFKGCDTQMIYDMLLRLKSTVYLPGDFVCK 548
Query: 153 KGEVGKEMYIVKTGQVQVVSGE---TVLATLTEGSVFGEISLLALAGTNRRTADVRSHGF 209
KGE+GKEMYI+K G+VQV+ G VL TL G+VFGEISLLA G NRRTA+V +HGF
Sbjct: 549 KGEIGKEMYIIKQGEVQVLGGSDGAQVLVTLKAGAVFGEISLLAGRGGNRRTANVIAHGF 608
Query: 210 SNLFVLNKDDLNEAIEYYPNAQEVLKKKARQLIKENAARERVSQPKLSTMDASSVLLDRK 269
+NL L+K L E + +YP+++++L KKA L+K+ A + P+ + L K
Sbjct: 609 ANLLTLDKKTLQEILVHYPDSEKLLMKKASVLLKKKAPATETTPPR----KGLAFLFPPK 664
Query: 270 GEEPKQAPKLL 280
E PK LL
Sbjct: 665 QETPKIFKALL 675
>sp|Q9JJZ9|CNGB3_MOUSE Cyclic nucleotide-gated cation channel beta-3 OS=Mus musculus
GN=Cngb3 PE=1 SV=1
Length = 694
Score = 170 bits (431), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 76/157 (48%), Positives = 114/157 (72%), Gaps = 3/157 (1%)
Query: 93 DENKILNNLPLKLKTDVAINVHIQTLSKVQLFQDCDEALLRELVLKLRPVLYLPGDYICR 152
DE+ +L NLP ++ +A++++ + KV+LF+ CD ++ +L+L+L+ +YLPGD++C+
Sbjct: 486 DESNLLENLPTAMQLSIALDINFSIIDKVELFKGCDTQMIYDLLLRLKSTIYLPGDFVCK 545
Query: 153 KGEVGKEMYIVKTGQVQVVS---GETVLATLTEGSVFGEISLLALAGTNRRTADVRSHGF 209
KGE+GKEMYI+K G+VQV+ G VL TL GSVFGEISLLA G NRRTADV +HGF
Sbjct: 546 KGEIGKEMYIIKHGEVQVLGGPDGAQVLVTLKAGSVFGEISLLAKGGGNRRTADVVAHGF 605
Query: 210 SNLFVLNKDDLNEAIEYYPNAQEVLKKKARQLIKENA 246
+NL L+K L E + +YP ++++L KKA+ L+ +
Sbjct: 606 ANLLTLDKKTLQEILLHYPTSKKLLMKKAKILLSQKG 642
>sp|Q03611|CNG_CAEEL Cyclic nucleotide-gated cation channel OS=Caenorhabditis elegans
GN=tax-4 PE=2 SV=3
Length = 733
Score = 170 bits (431), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 82/160 (51%), Positives = 123/160 (76%), Gaps = 5/160 (3%)
Query: 91 SEDENKILNNLPLKLKTDVAINVHIQTLSKVQLFQDCDEALLRELVLKLRPVLYLPGDYI 150
S + ++L LP KL+ ++A+ VH +TL KV++FQDC+ LL ELVLKL+ ++ PGD+I
Sbjct: 461 SLSDQQVLKVLPDKLQAEIAMQVHFETLRKVRIFQDCEAGLLAELVLKLQLQVFSPGDFI 520
Query: 151 CRKGEVGKEMYIVKTGQVQVV--SGETVLATLTEGSVFGEISLLALAGT---NRRTADVR 205
C+KG++G+EMYIVK G++QVV G+ V TL EGSVFGE+S+L +AG+ NRRTA+VR
Sbjct: 521 CKKGDIGREMYIVKRGRLQVVDDDGKKVFVTLQEGSVFGELSILNIAGSKNGNRRTANVR 580
Query: 206 SHGFSNLFVLNKDDLNEAIEYYPNAQEVLKKKARQLIKEN 245
S G+++LFVL+K DL A+ YP+A+++L K R+++K++
Sbjct: 581 SVGYTDLFVLSKTDLWNALREYPDARKLLLAKGREILKKD 620
>sp|Q24278|CNG_DROME Cyclic nucleotide-gated cation channel OS=Drosophila melanogaster
GN=Cng PE=2 SV=2
Length = 665
Score = 168 bits (425), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 87/169 (51%), Positives = 118/169 (69%), Gaps = 5/169 (2%)
Query: 83 SSTTLSSSSEDENKILNNLPLKLKTDVAINVHIQTLSKVQLFQDCDEALLRELVLKLRPV 142
+ T S + DE ++L LP KLK ++AI VH+ TL +V++F D + LL LVLKL+
Sbjct: 389 AYTWSQSGALDEERVLAALPDKLKAEIAIQVHMDTLKQVRIFHDTEPGLLEALVLKLKLQ 448
Query: 143 LYLPGDYICRKGEVGKEMYIVKTGQVQVVS--GETVLATLTEGSVFGEISLLALAGT--- 197
++ PGDYICRKG+VGKEMYIVK G++ VV G TVLATL GSVFGE+S+L +AG
Sbjct: 449 VFSPGDYICRKGDVGKEMYIVKRGKLSVVGDDGITVLATLGAGSVFGEVSVLEIAGNRTG 508
Query: 198 NRRTADVRSHGFSNLFVLNKDDLNEAIEYYPNAQEVLKKKARQLIKENA 246
NRRTA+VRS G+S+LF L K DL E + YP A+ L ++ QL++++
Sbjct: 509 NRRTANVRSLGYSDLFCLAKRDLWETLSDYPEARSTLTQRGCQLLRKDG 557
>sp|Q3UW12|CNGA4_MOUSE Cyclic nucleotide-gated cation channel alpha-4 OS=Mus musculus
GN=Cnga4 PE=2 SV=1
Length = 575
Score = 164 bits (416), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 77/155 (49%), Positives = 117/155 (75%), Gaps = 5/155 (3%)
Query: 93 DENKILNNLPLKLKTDVAINVHIQTLSKVQLFQDCDEALLRELVLKLRPVLYLPGDYICR 152
+E IL +LP +L+ +VA++VH+ TLS+VQ+FQ+C+ +LL ELVLKL+P Y PG+Y+CR
Sbjct: 318 NEVAILQHLPERLRAEVAVSVHLSTLSRVQIFQNCEASLLEELVLKLQPQTYSPGEYVCR 377
Query: 153 KGEVGKEMYIVKTGQVQVVS--GETVLATLTEGSVFGEISLLALAGT---NRRTADVRSH 207
KG++G+EMYI++ GQ+ VV+ G T A L G FGEIS++ + G NRRTA+++S
Sbjct: 378 KGDIGREMYIIREGQLAVVADDGVTQYAVLGAGLYFGEISIINIKGNMSGNRRTANIKSL 437
Query: 208 GFSNLFVLNKDDLNEAIEYYPNAQEVLKKKARQLI 242
G+S+LF L+K+DL E + YP AQ V+++K R+++
Sbjct: 438 GYSDLFCLSKEDLREVLSEYPQAQAVMEEKGREIL 472
>sp|Q64359|CNGA4_RAT Cyclic nucleotide-gated cation channel alpha-4 OS=Rattus norvegicus
GN=Cnga4 PE=2 SV=1
Length = 575
Score = 164 bits (415), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 77/155 (49%), Positives = 117/155 (75%), Gaps = 5/155 (3%)
Query: 93 DENKILNNLPLKLKTDVAINVHIQTLSKVQLFQDCDEALLRELVLKLRPVLYLPGDYICR 152
+E IL +LP +L+ +VA++VH+ TLS+VQ+FQ+C+ +LL ELVLKL+P Y PG+Y+CR
Sbjct: 318 NEVAILQHLPERLRAEVAVSVHLSTLSRVQIFQNCEASLLEELVLKLQPQTYSPGEYVCR 377
Query: 153 KGEVGKEMYIVKTGQVQVVS--GETVLATLTEGSVFGEISLLALAGT---NRRTADVRSH 207
KG++G+EMYI++ GQ+ VV+ G T A L G FGEIS++ + G NRRTA+++S
Sbjct: 378 KGDIGREMYIIREGQLAVVADDGVTQYAVLGAGLYFGEISIINIKGNMSGNRRTANIKSL 437
Query: 208 GFSNLFVLNKDDLNEAIEYYPNAQEVLKKKARQLI 242
G+S+LF L+K+DL E + YP AQ V+++K R+++
Sbjct: 438 GYSDLFCLSKEDLREVLSEYPQAQAVMEEKGREIL 472
>sp|Q8IV77|CNGA4_HUMAN Cyclic nucleotide-gated cation channel alpha-4 OS=Homo sapiens
GN=CNGA4 PE=1 SV=3
Length = 575
Score = 163 bits (413), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 76/155 (49%), Positives = 117/155 (75%), Gaps = 5/155 (3%)
Query: 93 DENKILNNLPLKLKTDVAINVHIQTLSKVQLFQDCDEALLRELVLKLRPVLYLPGDYICR 152
+E IL +LP +L+ +VA++VH+ TLS+VQ+FQ+C+ +LL ELVLKL+P Y PG+Y+CR
Sbjct: 318 NEVAILQHLPERLRAEVAVSVHLSTLSRVQIFQNCEASLLEELVLKLQPQTYSPGEYVCR 377
Query: 153 KGEVGKEMYIVKTGQVQVVS--GETVLATLTEGSVFGEISLLALAGT---NRRTADVRSH 207
KG++G+EMYI++ GQ+ VV+ G T A L G FGEIS++ + G NRRTA+++S
Sbjct: 378 KGDIGQEMYIIREGQLAVVADDGITQYAVLGAGLYFGEISIINIKGNMSGNRRTANIKSL 437
Query: 208 GFSNLFVLNKDDLNEAIEYYPNAQEVLKKKARQLI 242
G+S+LF L+K+DL E + YP AQ ++++K R+++
Sbjct: 438 GYSDLFCLSKEDLREVLSEYPQAQTIMEEKGREIL 472
>sp|O60741|HCN1_HUMAN Potassium/sodium hyperpolarization-activated cyclic
nucleotide-gated channel 1 OS=Homo sapiens GN=HCN1 PE=2
SV=3
Length = 890
Score = 94.4 bits (233), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 84/147 (57%), Gaps = 5/147 (3%)
Query: 93 DENKILNNLPLKLKTDVAINVHIQTL-SKVQLFQDCDEALLRELVLKLRPVLYLPGDYIC 151
DE ILN L L+ ++ +N + + L + + LF + D + ++ KLR ++ PGDYI
Sbjct: 445 DEENILNELNDPLREEI-VNFNCRKLVATMPLFANADPNFVTAMLSKLRFEVFQPGDYII 503
Query: 152 RKGEVGKEMYIVKTGQVQVVSGETVLATLTEGSVFGEISLLALAGTNRRTADVRSHGFSN 211
R+G VGK+MY ++ G V++ + LT+GS FGEI LL RRTA VR+ +
Sbjct: 504 REGAVGKKMYFIQHGVAGVITKSSKEMKLTDGSYFGEICLLT---KGRRTASVRADTYCR 560
Query: 212 LFVLNKDDLNEAIEYYPNAQEVLKKKA 238
L+ L+ D+ NE +E YP + + A
Sbjct: 561 LYSLSVDNFNEVLEEYPMMRRAFETVA 587
>sp|Q9MZS1|HCN1_RABIT Potassium/sodium hyperpolarization-activated cyclic
nucleotide-gated channel 1 OS=Oryctolagus cuniculus
GN=HCN1 PE=2 SV=2
Length = 822
Score = 94.0 bits (232), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 84/147 (57%), Gaps = 5/147 (3%)
Query: 93 DENKILNNLPLKLKTDVAINVHIQTL-SKVQLFQDCDEALLRELVLKLRPVLYLPGDYIC 151
DE ILN L L+ ++ +N + + L + + LF + D + ++ KLR ++ PGDYI
Sbjct: 381 DEENILNELNDPLREEI-VNFNCRKLVATMPLFANADPNFVTAMLSKLRFEVFQPGDYII 439
Query: 152 RKGEVGKEMYIVKTGQVQVVSGETVLATLTEGSVFGEISLLALAGTNRRTADVRSHGFSN 211
R+G VGK+MY ++ G V++ + LT+GS FGEI LL RRTA VR+ +
Sbjct: 440 REGAVGKKMYFIQHGVAGVITKSSKEMKLTDGSYFGEICLLT---KGRRTASVRADTYCR 496
Query: 212 LFVLNKDDLNEAIEYYPNAQEVLKKKA 238
L+ L+ D+ NE +E YP + + A
Sbjct: 497 LYSLSVDNFNEVLEEYPMMRRAFETVA 523
>sp|Q9TV66|HCN4_RABIT Potassium/sodium hyperpolarization-activated cyclic
nucleotide-gated channel 4 OS=Oryctolagus cuniculus
GN=HCN4 PE=2 SV=1
Length = 1175
Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 82/147 (55%), Gaps = 5/147 (3%)
Query: 93 DENKILNNLPLKLKTDVAINVHIQTL-SKVQLFQDCDEALLRELVLKLRPVLYLPGDYIC 151
DE IL L L+ ++ IN + + L + + LF + D + ++ KLR ++ PGDYI
Sbjct: 566 DEESILGELSEPLREEI-INFNCRKLVASMPLFANADPNFVTSMLTKLRFEVFQPGDYII 624
Query: 152 RKGEVGKEMYIVKTGQVQVVSGETVLATLTEGSVFGEISLLALAGTNRRTADVRSHGFSN 211
R+G +GK+MY ++ G V V++ L +GS FGEI LL RRTA VR+ +
Sbjct: 625 REGTIGKKMYFIQHGVVSVLTKGNKETKLADGSYFGEICLLT---RGRRTASVRADTYCR 681
Query: 212 LFVLNKDDLNEAIEYYPNAQEVLKKKA 238
L+ L+ D+ NE +E YP + + A
Sbjct: 682 LYSLSVDNFNEVLEEYPMMRRAFETVA 708
>sp|Q9JKA7|HCN4_RAT Potassium/sodium hyperpolarization-activated cyclic
nucleotide-gated channel 4 OS=Rattus norvegicus GN=Hcn4
PE=2 SV=1
Length = 1198
Score = 92.8 bits (229), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 82/147 (55%), Gaps = 5/147 (3%)
Query: 93 DENKILNNLPLKLKTDVAINVHIQTL-SKVQLFQDCDEALLRELVLKLRPVLYLPGDYIC 151
DE IL L L+ ++ IN + + L + + LF + D + ++ KLR ++ PGDYI
Sbjct: 565 DEESILGELSEPLREEI-INFNCRKLVASMPLFANADPNFVTSMLTKLRFEVFQPGDYII 623
Query: 152 RKGEVGKEMYIVKTGQVQVVSGETVLATLTEGSVFGEISLLALAGTNRRTADVRSHGFSN 211
R+G +GK+MY ++ G V V++ L +GS FGEI LL RRTA VR+ +
Sbjct: 624 REGTIGKKMYFIQHGVVSVLTKGNKETKLADGSYFGEICLLT---RGRRTASVRADTYCR 680
Query: 212 LFVLNKDDLNEAIEYYPNAQEVLKKKA 238
L+ L+ D+ NE +E YP + + A
Sbjct: 681 LYSLSVDNFNEVLEEYPMMRRAFETVA 707
>sp|Q9JKB0|HCN1_RAT Potassium/sodium hyperpolarization-activated cyclic
nucleotide-gated channel 1 OS=Rattus norvegicus GN=Hcn1
PE=2 SV=1
Length = 910
Score = 92.4 bits (228), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 84/147 (57%), Gaps = 5/147 (3%)
Query: 93 DENKILNNLPLKLKTDVAINVHIQTL-SKVQLFQDCDEALLRELVLKLRPVLYLPGDYIC 151
DE IL+ L L+ ++ +N + + L + + LF + D + ++ KLR ++ PGDYI
Sbjct: 434 DEENILSELNDPLREEI-VNFNCRKLVATMPLFANADPNFVTAMLSKLRFEVFQPGDYII 492
Query: 152 RKGEVGKEMYIVKTGQVQVVSGETVLATLTEGSVFGEISLLALAGTNRRTADVRSHGFSN 211
R+G VGK+MY ++ G V++ + LT+GS FGEI LL RRTA VR+ +
Sbjct: 493 REGAVGKKMYFIQHGVAGVITKSSKEMKLTDGSYFGEICLLT---KGRRTASVRADTYCR 549
Query: 212 LFVLNKDDLNEAIEYYPNAQEVLKKKA 238
L+ L+ D+ NE +E YP + + A
Sbjct: 550 LYSLSVDNFNEVLEEYPMMRRAFETVA 576
>sp|O70507|HCN4_MOUSE Potassium/sodium hyperpolarization-activated cyclic
nucleotide-gated channel 4 OS=Mus musculus GN=Hcn4 PE=1
SV=2
Length = 1186
Score = 92.4 bits (228), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 84/146 (57%), Gaps = 9/146 (6%)
Query: 93 DENKILNNLPLKLKTDVAINVHIQTL-SKVQLFQDCDEALLRELVLKLRPVLYLPGDYIC 151
DE IL L L+ ++ IN + + L + + LF + D + ++ KLR ++ PGDYI
Sbjct: 565 DEESILGELSEPLREEI-INFNCRKLVASMPLFANADPNFVTSMLTKLRFEVFQPGDYII 623
Query: 152 RKGEVGKEMYIVKTGQVQVVSGETVLATLTEGSVFGEISLLALAGTNRRTADVRSHGFSN 211
R+G +GK+MY ++ G V V++ L +GS FGEI LL RRTA VR+ +
Sbjct: 624 REGTIGKKMYFIQHGVVSVLTKGNKETRLADGSYFGEICLLT---RGRRTASVRADTYCR 680
Query: 212 LFVLNKDDLNEAIEYYPNAQEVLKKK 237
L+ L+ D+ NE +E YP +++KK
Sbjct: 681 LYSLSVDNFNEVLEEYP----MMRKK 702
>sp|O88704|HCN1_MOUSE Potassium/sodium hyperpolarization-activated cyclic
nucleotide-gated channel 1 OS=Mus musculus GN=Hcn1 PE=1
SV=1
Length = 910
Score = 92.4 bits (228), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 84/147 (57%), Gaps = 5/147 (3%)
Query: 93 DENKILNNLPLKLKTDVAINVHIQTL-SKVQLFQDCDEALLRELVLKLRPVLYLPGDYIC 151
DE IL+ L L+ ++ +N + + L + + LF + D + ++ KLR ++ PGDYI
Sbjct: 434 DEENILSELNDPLREEI-VNFNCRKLVATMPLFANADPNFVTAMLSKLRFEVFQPGDYII 492
Query: 152 RKGEVGKEMYIVKTGQVQVVSGETVLATLTEGSVFGEISLLALAGTNRRTADVRSHGFSN 211
R+G VGK+MY ++ G V++ + LT+GS FGEI LL RRTA VR+ +
Sbjct: 493 REGAVGKKMYFIQHGVAGVITKSSKEMKLTDGSYFGEICLLT---KGRRTASVRADTYCR 549
Query: 212 LFVLNKDDLNEAIEYYPNAQEVLKKKA 238
L+ L+ D+ NE +E YP + + A
Sbjct: 550 LYSLSVDNFNEVLEEYPMMRRAFETVA 576
>sp|Q9UL51|HCN2_HUMAN Potassium/sodium hyperpolarization-activated cyclic
nucleotide-gated channel 2 OS=Homo sapiens GN=HCN2 PE=1
SV=3
Length = 889
Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 84/147 (57%), Gaps = 5/147 (3%)
Query: 93 DENKILNNLPLKLKTDVAINVHIQTL-SKVQLFQDCDEALLRELVLKLRPVLYLPGDYIC 151
DE+ IL L L+ ++ +N + + L + + LF + D + ++ KL+ ++ PGDYI
Sbjct: 514 DEDSILGELNGPLREEI-VNFNCRKLVASMPLFANADPNFVTAMLTKLKFEVFQPGDYII 572
Query: 152 RKGEVGKEMYIVKTGQVQVVSGETVLATLTEGSVFGEISLLALAGTNRRTADVRSHGFSN 211
R+G +GK+MY ++ G V V++ L++GS FGEI LL RRTA VR+ +
Sbjct: 573 REGTIGKKMYFIQHGVVSVLTKGNKEMKLSDGSYFGEICLLT---RGRRTASVRADTYCR 629
Query: 212 LFVLNKDDLNEAIEYYPNAQEVLKKKA 238
L+ L+ D+ NE +E YP + + A
Sbjct: 630 LYSLSVDNFNEVLEEYPMMRRAFETVA 656
>sp|Q9JKA9|HCN2_RAT Potassium/sodium hyperpolarization-activated cyclic
nucleotide-gated channel 2 OS=Rattus norvegicus GN=Hcn2
PE=2 SV=3
Length = 863
Score = 90.9 bits (224), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 84/147 (57%), Gaps = 5/147 (3%)
Query: 93 DENKILNNLPLKLKTDVAINVHIQTL-SKVQLFQDCDEALLRELVLKLRPVLYLPGDYIC 151
DE+ IL L L+ ++ +N + + L + + LF + D + ++ KL+ ++ PGDYI
Sbjct: 487 DEDSILGELNGPLREEI-VNFNCRKLVASMPLFANADPNFVTAMLTKLKFEVFQPGDYII 545
Query: 152 RKGEVGKEMYIVKTGQVQVVSGETVLATLTEGSVFGEISLLALAGTNRRTADVRSHGFSN 211
R+G +GK+MY ++ G V V++ L++GS FGEI LL RRTA VR+ +
Sbjct: 546 REGTIGKKMYFIQHGVVSVLTKGNKEMKLSDGSYFGEICLLT---RGRRTASVRADTYCR 602
Query: 212 LFVLNKDDLNEAIEYYPNAQEVLKKKA 238
L+ L+ D+ NE +E YP + + A
Sbjct: 603 LYSLSVDNFNEVLEEYPMMRRAFETVA 629
>sp|O88703|HCN2_MOUSE Potassium/sodium hyperpolarization-activated cyclic
nucleotide-gated channel 2 OS=Mus musculus GN=Hcn2 PE=1
SV=1
Length = 863
Score = 90.9 bits (224), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 84/147 (57%), Gaps = 5/147 (3%)
Query: 93 DENKILNNLPLKLKTDVAINVHIQTL-SKVQLFQDCDEALLRELVLKLRPVLYLPGDYIC 151
DE+ IL L L+ ++ +N + + L + + LF + D + ++ KL+ ++ PGDYI
Sbjct: 487 DEDSILGELNGPLREEI-VNFNCRKLVASMPLFANADPNFVTAMLTKLKFEVFQPGDYII 545
Query: 152 RKGEVGKEMYIVKTGQVQVVSGETVLATLTEGSVFGEISLLALAGTNRRTADVRSHGFSN 211
R+G +GK+MY ++ G V V++ L++GS FGEI LL RRTA VR+ +
Sbjct: 546 REGTIGKKMYFIQHGVVSVLTKGNKEMKLSDGSYFGEICLLT---RGRRTASVRADTYCR 602
Query: 212 LFVLNKDDLNEAIEYYPNAQEVLKKKA 238
L+ L+ D+ NE +E YP + + A
Sbjct: 603 LYSLSVDNFNEVLEEYPMMRRAFETVA 629
>sp|Q9Y3Q4|HCN4_HUMAN Potassium/sodium hyperpolarization-activated cyclic
nucleotide-gated channel 4 OS=Homo sapiens GN=HCN4 PE=1
SV=1
Length = 1203
Score = 89.4 bits (220), Expect = 4e-17, Method: Composition-based stats.
Identities = 52/137 (37%), Positives = 79/137 (57%), Gaps = 5/137 (3%)
Query: 93 DENKILNNLPLKLKTDVAINVHIQTL-SKVQLFQDCDEALLRELVLKLRPVLYLPGDYIC 151
DE IL L L+ ++ IN + + L + + LF + D + ++ KLR ++ PGDYI
Sbjct: 565 DEESILGELSEPLREEI-INFNCRKLVASMPLFANADPNFVTSMLTKLRFEVFQPGDYII 623
Query: 152 RKGEVGKEMYIVKTGQVQVVSGETVLATLTEGSVFGEISLLALAGTNRRTADVRSHGFSN 211
R+G +GK+MY ++ G V V++ L +GS FGEI LL RRTA VR+ +
Sbjct: 624 REGTIGKKMYFIQHGVVSVLTKGNKETKLADGSYFGEICLLT---RGRRTASVRADTYCR 680
Query: 212 LFVLNKDDLNEAIEYYP 228
L+ L+ D+ NE +E YP
Sbjct: 681 LYSLSVDNFNEVLEEYP 697
>sp|O88705|HCN3_MOUSE Potassium/sodium hyperpolarization-activated cyclic
nucleotide-gated channel 3 OS=Mus musculus GN=Hcn3 PE=1
SV=1
Length = 779
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 88/163 (53%), Gaps = 9/163 (5%)
Query: 93 DENKILNNLPLKLKTDVAINVHIQTL-SKVQLFQDCDEALLRELVLKLRPVLYLPGDYIC 151
DE IL L L+ ++ IN + L + + LF D + + ++ KLR ++ PGD +
Sbjct: 397 DEESILGELSEPLREEI-INFTCRGLVAHMPLFAHADPSFVTAVLTKLRFEVFQPGDLVV 455
Query: 152 RKGEVGKEMYIVKTGQVQVVSGETVLATLTEGSVFGEISLLALAGTNRRTADVRSHGFSN 211
R+G VG++MY ++ G + V++ LT+GS FGEI LL RRTA VR+ +
Sbjct: 456 REGSVGRKMYFIQHGLLSVLARGARDTRLTDGSYFGEICLLT---RGRRTASVRADTYCR 512
Query: 212 LFVLNKDDLNEAIEYYPNAQEVLKKKA----RQLIKENAARER 250
L+ L+ D N +E +P + + A R++ K+N+ +R
Sbjct: 513 LYSLSVDHFNAVLEEFPMMRRAFETVAMDRLRRIGKKNSILQR 555
>sp|Q9JKA8|HCN3_RAT Potassium/sodium hyperpolarization-activated cyclic
nucleotide-gated channel 3 OS=Rattus norvegicus GN=Hcn3
PE=2 SV=1
Length = 780
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 88/163 (53%), Gaps = 9/163 (5%)
Query: 93 DENKILNNLPLKLKTDVAINVHIQTL-SKVQLFQDCDEALLRELVLKLRPVLYLPGDYIC 151
DE IL L L+ ++ IN + L + + LF D + + ++ KLR ++ PGD +
Sbjct: 397 DEESILGELSEPLREEI-INFTCRGLVAHMPLFAHADPSFVTAVLTKLRFEVFQPGDLVV 455
Query: 152 RKGEVGKEMYIVKTGQVQVVSGETVLATLTEGSVFGEISLLALAGTNRRTADVRSHGFSN 211
R+G VG++MY ++ G + V++ LT+GS FGEI LL RRTA VR+ +
Sbjct: 456 REGSVGRKMYFIQHGLLSVLARGARDTRLTDGSYFGEICLLT---RGRRTASVRADTYCR 512
Query: 212 LFVLNKDDLNEAIEYYPNAQEVLKKKA----RQLIKENAARER 250
L+ L+ D N +E +P + + A R++ K+N+ +R
Sbjct: 513 LYSLSVDHFNAVLEEFPMMRRAFETVAMDRLRRIGKKNSILQR 555
>sp|Q9P1Z3|HCN3_HUMAN Potassium/sodium hyperpolarization-activated cyclic
nucleotide-gated channel 3 OS=Homo sapiens GN=HCN3 PE=2
SV=2
Length = 774
Score = 83.2 bits (204), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 91/182 (50%), Gaps = 19/182 (10%)
Query: 93 DENKILNNLPLKLKTDVAINVHIQTL-SKVQLFQDCDEALLRELVLKLRPVLYLPGDYIC 151
DE IL L L+ ++ IN + L + + LF D + + ++ KLR ++ PGD +
Sbjct: 398 DEESILGELSEPLREEI-INFTCRGLVAHMPLFAHADPSFVTAVLTKLRFEVFQPGDLVV 456
Query: 152 RKGEVGKEMYIVKTGQVQVVSGETVLATLTEGSVFGEISLLALAGTNRRTADVRSHGFSN 211
R+G VG++MY ++ G + V++ LT+GS FGEI LL RRTA VR+ +
Sbjct: 457 REGSVGRKMYFIQHGLLSVLARGARDTRLTDGSYFGEICLLT---RGRRTASVRADTYCR 513
Query: 212 LFVLNKDDLNEAIEYYPNAQEVLKKKARQLIKENAARERVSQPKLSTMDASSVLLDRKGE 271
L+ L+ D N +E +P + A E V+ +L + + +L RK
Sbjct: 514 LYSLSVDHFNAVLEEFPMMRR--------------AFETVAMDRLLRIGKKNSILQRKRS 559
Query: 272 EP 273
EP
Sbjct: 560 EP 561
>sp|Q9WVJ0|KCNH3_MOUSE Potassium voltage-gated channel subfamily H member 3 OS=Mus
musculus GN=Kcnh3 PE=2 SV=2
Length = 1087
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 81/160 (50%), Gaps = 2/160 (1%)
Query: 93 DENKILNNLPLKLKTDVAINVHIQTLSKVQLFQDCDEALLRELVLKLRPVLYLPGDYICR 152
D ++L +LP +L+ D+A+++H + L ++ LF+ LR L L LRP PG+Y+
Sbjct: 556 DTTELLQSLPDELRADIAMHLHKEVL-QLPLFEAASRGCLRALSLALRPAFCTPGEYLIH 614
Query: 153 KGEVGKEMYIVKTGQVQVVSGETVLATLTEGSVFGEISLLALAGTNRRTADVRSHGFSNL 212
+G+ + +Y V +G ++V+ G TVLA L +G + G L + ADV+ + L
Sbjct: 615 QGDALQALYFVCSGSMEVLKGGTVLAILGKGDLIG-CELPQREQVVKANADVKGLTYCVL 673
Query: 213 FVLNKDDLNEAIEYYPNAQEVLKKKARQLIKENAARERVS 252
L L+E++ YP + R + N VS
Sbjct: 674 QCLQLAGLHESLALYPEFAPRFSRGLRGELSYNLGAGGVS 713
>sp|O89047|KCNH3_RAT Potassium voltage-gated channel subfamily H member 3 OS=Rattus
norvegicus GN=Kcnh3 PE=2 SV=1
Length = 1087
Score = 80.1 bits (196), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 81/160 (50%), Gaps = 2/160 (1%)
Query: 93 DENKILNNLPLKLKTDVAINVHIQTLSKVQLFQDCDEALLRELVLKLRPVLYLPGDYICR 152
D ++L +LP +L+ D+A+++H + L ++ LF+ LR L L LRP PG+Y+
Sbjct: 556 DTTELLQSLPDELRADIAMHLHKEVL-QLPLFEAASRGCLRALSLALRPAFCTPGEYLIH 614
Query: 153 KGEVGKEMYIVKTGQVQVVSGETVLATLTEGSVFGEISLLALAGTNRRTADVRSHGFSNL 212
+G+ + +Y V +G ++V+ G TVLA L +G + G L + ADV+ + L
Sbjct: 615 QGDALQALYFVCSGSMEVLKGGTVLAILGKGDLIG-CELPQREQVVKANADVKGLTYCVL 673
Query: 213 FVLNKDDLNEAIEYYPNAQEVLKKKARQLIKENAARERVS 252
L L+E++ YP + R + N VS
Sbjct: 674 QCLQLAGLHESLALYPEFAPRFSRGLRGELSYNLGAGGVS 713
>sp|Q9ULD8|KCNH3_HUMAN Potassium voltage-gated channel subfamily H member 3 OS=Homo
sapiens GN=KCNH3 PE=2 SV=2
Length = 1083
Score = 79.0 bits (193), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 99/212 (46%), Gaps = 11/212 (5%)
Query: 93 DENKILNNLPLKLKTDVAINVHIQTLSKVQLFQDCDEALLRELVLKLRPVLYLPGDYICR 152
D ++L +LP +L+ D+A+++H + L ++ LF+ LR L L LRP PG+Y+
Sbjct: 553 DTTELLQSLPDELRADIAMHLHKEVL-QLPLFEAASRGCLRALSLALRPAFCTPGEYLIH 611
Query: 153 KGEVGKEMYIVKTGQVQVVSGETVLATLTEGSVFGEISLLALAGTNRRTADVRSHGFSNL 212
+G+ + +Y V +G ++V+ G TVLA L +G + G L + ADV+ + L
Sbjct: 612 QGDALQALYFVCSGSMEVLKGGTVLAILGKGDLIG-CELPRREQVVKANADVKGLTYCVL 670
Query: 213 FVLNKDDLNEAIEYYPNAQEVLKKKARQLIKEN----AARERVSQPKLSTMDASSVLLDR 268
L L++++ YP + R + N V LS + L+
Sbjct: 671 QCLQLAGLHDSLALYPEFAPRFSRGLRGELSYNLGAGGGSAEVDTSSLSGDNTLMSTLEE 730
Query: 269 KGEEPKQAPKLLPIVMQVVPQNSMASKLLRCG 300
K + +Q P + P P + +S LL G
Sbjct: 731 KETDGEQGPTVSP-----APADEPSSPLLSPG 757
>sp|Q9H252|KCNH6_HUMAN Potassium voltage-gated channel subfamily H member 6 OS=Homo
sapiens GN=KCNH6 PE=1 SV=1
Length = 994
Score = 76.3 bits (186), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 73/146 (50%), Gaps = 3/146 (2%)
Query: 93 DENKILNNLPLKLKTDVAINVHIQTLSKVQLFQDCDEALLRELVLKLRPVLYLPGDYICR 152
D N +L P L+ D+ +++H L F + LR L +K + PGD +
Sbjct: 564 DMNAVLKGFPECLQADICLHLHRALLQHCPAFSGAGKGCLRALAVKFKTTHAPPGDTLVH 623
Query: 153 KGEVGKEMYIVKTGQVQVVSGETVLATLTEGSVFGE-ISLLALAGTNRRTADVRSHGFSN 211
G+V +Y + G ++++ + V+A L + +FGE +SL A G + +ADVR+ + +
Sbjct: 624 LGDVLSTLYFISRGSIEILRDDVVVAILGKNDIFGEPVSLHAQPG--KSSADVRALTYCD 681
Query: 212 LFVLNKDDLNEAIEYYPNAQEVLKKK 237
L + + DL E ++ YP E K
Sbjct: 682 LHKIQRADLLEVLDMYPAFAESFWSK 707
>sp|O08962|KCNH2_RAT Potassium voltage-gated channel subfamily H member 2 OS=Rattus
norvegicus GN=Kcnh2 PE=1 SV=1
Length = 1163
Score = 76.3 bits (186), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 74/137 (54%), Gaps = 3/137 (2%)
Query: 93 DENKILNNLPLKLKTDVAINVHIQTLSKVQLFQDCDEALLRELVLKLRPVLYLPGDYICR 152
D N +L P L+ D+ ++++ L + F+ + LR L +K + PGD +
Sbjct: 714 DMNAVLKGFPECLQADICLHLNRSLLQHCKPFRGATKGCLRALAMKFKTTHAPPGDTLVH 773
Query: 153 KGEVGKEMYIVKTGQVQVVSGETVLATLTEGSVFGE-ISLLALAGTNRRTADVRSHGFSN 211
G++ +Y + G ++++ G+ V+A L + +FGE ++L A G + DVR+ + +
Sbjct: 774 AGDLLTALYFISRGSIEILRGDVVVAILGKNDIFGEPLNLYARPG--KSNGDVRALTYCD 831
Query: 212 LFVLNKDDLNEAIEYYP 228
L +++DDL E ++ YP
Sbjct: 832 LHKIHRDDLLEVLDMYP 848
>sp|Q12809|KCNH2_HUMAN Potassium voltage-gated channel subfamily H member 2 OS=Homo
sapiens GN=KCNH2 PE=1 SV=1
Length = 1159
Score = 76.3 bits (186), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 74/137 (54%), Gaps = 3/137 (2%)
Query: 93 DENKILNNLPLKLKTDVAINVHIQTLSKVQLFQDCDEALLRELVLKLRPVLYLPGDYICR 152
D N +L P L+ D+ ++++ L + F+ + LR L +K + PGD +
Sbjct: 712 DMNAVLKGFPECLQADICLHLNRSLLQHCKPFRGATKGCLRALAMKFKTTHAPPGDTLVH 771
Query: 153 KGEVGKEMYIVKTGQVQVVSGETVLATLTEGSVFGE-ISLLALAGTNRRTADVRSHGFSN 211
G++ +Y + G ++++ G+ V+A L + +FGE ++L A G + DVR+ + +
Sbjct: 772 AGDLLTALYFISRGSIEILRGDVVVAILGKNDIFGEPLNLYARPG--KSNGDVRALTYCD 829
Query: 212 LFVLNKDDLNEAIEYYP 228
L +++DDL E ++ YP
Sbjct: 830 LHKIHRDDLLEVLDMYP 846
>sp|O35219|KCNH2_MOUSE Potassium voltage-gated channel subfamily H member 2 OS=Mus
musculus GN=Kcnh2 PE=2 SV=2
Length = 1162
Score = 76.3 bits (186), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 74/137 (54%), Gaps = 3/137 (2%)
Query: 93 DENKILNNLPLKLKTDVAINVHIQTLSKVQLFQDCDEALLRELVLKLRPVLYLPGDYICR 152
D N +L P L+ D+ ++++ L + F+ + LR L +K + PGD +
Sbjct: 714 DMNAVLKGFPECLQADICLHLNRSLLQHCKPFRGATKGCLRALAMKFKTTHAPPGDTLVH 773
Query: 153 KGEVGKEMYIVKTGQVQVVSGETVLATLTEGSVFGE-ISLLALAGTNRRTADVRSHGFSN 211
G++ +Y + G ++++ G+ V+A L + +FGE ++L A G + DVR+ + +
Sbjct: 774 AGDLLTALYFISRGSIEILRGDVVVAILGKNDIFGEPLNLYARPG--KSNGDVRALTYCD 831
Query: 212 LFVLNKDDLNEAIEYYP 228
L +++DDL E ++ YP
Sbjct: 832 LHKIHRDDLLEVLDMYP 848
>sp|Q9TSZ3|KCNH2_CANFA Potassium voltage-gated channel subfamily H member 2 OS=Canis
familiaris GN=KCNH2 PE=2 SV=1
Length = 1158
Score = 75.9 bits (185), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 74/137 (54%), Gaps = 3/137 (2%)
Query: 93 DENKILNNLPLKLKTDVAINVHIQTLSKVQLFQDCDEALLRELVLKLRPVLYLPGDYICR 152
D N +L P L+ D+ ++++ L + F+ + LR L +K + PGD +
Sbjct: 711 DMNAVLKGFPECLQADICLHLNRSLLQHCKPFRGATKGCLRALAMKFKTTHAPPGDTLVH 770
Query: 153 KGEVGKEMYIVKTGQVQVVSGETVLATLTEGSVFGE-ISLLALAGTNRRTADVRSHGFSN 211
G++ +Y + G ++++ G+ V+A L + +FGE ++L A G + DVR+ + +
Sbjct: 771 AGDLLTALYFISRGSIEILRGDVVVAILGKNDIFGEPLNLYARPG--KSNGDVRALTYCD 828
Query: 212 LFVLNKDDLNEAIEYYP 228
L +++DDL E ++ YP
Sbjct: 829 LHKIHRDDLLEVLDMYP 845
>sp|Q8WNY2|KCNH2_RABIT Potassium voltage-gated channel subfamily H member 2 OS=Oryctolagus
cuniculus GN=KCNH2 PE=2 SV=3
Length = 1161
Score = 75.1 bits (183), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 74/137 (54%), Gaps = 3/137 (2%)
Query: 93 DENKILNNLPLKLKTDVAINVHIQTLSKVQLFQDCDEALLRELVLKLRPVLYLPGDYICR 152
D N +L P L+ D+ ++++ L + F+ + LR L +K + PGD +
Sbjct: 714 DMNAVLKGFPECLQADICLHLNRSLLQHCKPFRGATKDCLRALAMKFKTTHAPPGDTLVH 773
Query: 153 KGEVGKEMYIVKTGQVQVVSGETVLATLTEGSVFGE-ISLLALAGTNRRTADVRSHGFSN 211
G++ +Y + G ++++ G+ V+A L + +FGE ++L A G + DVR+ + +
Sbjct: 774 AGDLLTALYFISRGSIEILRGDVVVAILGKNDIFGEPLNLYARPG--KSNGDVRALTYCD 831
Query: 212 LFVLNKDDLNEAIEYYP 228
L +++DDL E ++ YP
Sbjct: 832 LHKIHRDDLLEVLDMYP 848
>sp|O54853|KCNH6_RAT Potassium voltage-gated channel subfamily H member 6 OS=Rattus
norvegicus GN=Kcnh6 PE=1 SV=1
Length = 950
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 73/145 (50%), Gaps = 1/145 (0%)
Query: 93 DENKILNNLPLKLKTDVAINVHIQTLSKVQLFQDCDEALLRELVLKLRPVLYLPGDYICR 152
D N +L P L+ D+ +++H L F+ + LR L +K + PGD +
Sbjct: 564 DMNAVLKGFPECLQADICLHLHRALLQHCPAFRGASKGCLRALAVKFKTTHAPPGDTLVH 623
Query: 153 KGEVGKEMYIVKTGQVQVVSGETVLATLTEGSVFGEISLLALAGTNRRTADVRSHGFSNL 212
G+V +Y + G ++++ + V+A L + +FGE + L A + +ADVR+ + +L
Sbjct: 624 LGDVLSTLYFISRGSIEILRDDVVVAILGKNDIFGEPASLH-ARPGKSSADVRALTYCDL 682
Query: 213 FVLNKDDLNEAIEYYPNAQEVLKKK 237
+++ DL E ++ YP + K
Sbjct: 683 HKIHRADLLEVLDMYPAFADTFWNK 707
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.131 0.364
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 130,806,425
Number of Sequences: 539616
Number of extensions: 5385132
Number of successful extensions: 18325
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 142
Number of HSP's successfully gapped in prelim test: 61
Number of HSP's that attempted gapping in prelim test: 18028
Number of HSP's gapped (non-prelim): 274
length of query: 361
length of database: 191,569,459
effective HSP length: 119
effective length of query: 242
effective length of database: 127,355,155
effective search space: 30819947510
effective search space used: 30819947510
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 62 (28.5 bits)