Query psy9025
Match_columns 361
No_of_seqs 418 out of 3167
Neff 9.2
Searched_HMMs 46136
Date Fri Aug 16 17:06:20 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9025.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/9025hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0614|consensus 100.0 3.6E-40 7.8E-45 304.6 8.5 264 88-359 220-542 (732)
2 KOG0500|consensus 100.0 1.9E-35 4.1E-40 271.9 18.4 223 5-244 204-440 (536)
3 KOG0498|consensus 100.0 6.9E-34 1.5E-38 280.3 15.2 218 4-236 315-542 (727)
4 KOG0499|consensus 100.0 2E-31 4.3E-36 249.2 10.1 223 14-249 436-663 (815)
5 PLN03192 Voltage-dependent pot 100.0 4.6E-30 1E-34 266.5 19.8 221 3-244 270-503 (823)
6 KOG0501|consensus 99.9 2E-22 4.2E-27 188.9 7.1 222 3-236 443-667 (971)
7 COG2905 Predicted signal-trans 99.9 1.2E-21 2.5E-26 184.5 12.0 231 113-355 4-247 (610)
8 PRK09392 ftrB transcriptional 99.8 2.9E-17 6.3E-22 146.6 17.3 129 115-246 6-138 (236)
9 PRK11753 DNA-binding transcrip 99.7 1.7E-15 3.8E-20 132.7 17.2 120 125-246 6-130 (211)
10 cd00038 CAP_ED effector domain 99.6 3.4E-15 7.4E-20 116.7 13.3 109 123-234 1-114 (115)
11 COG0664 Crp cAMP-binding prote 99.6 1.2E-14 2.6E-19 127.0 15.7 127 119-248 3-134 (214)
12 KOG1113|consensus 99.6 1.1E-15 2.3E-20 136.9 8.6 117 112-231 118-234 (368)
13 PRK11161 fumarate/nitrate redu 99.6 1.7E-14 3.8E-19 128.6 15.9 126 118-247 15-146 (235)
14 PRK10402 DNA-binding transcrip 99.6 1E-14 2.2E-19 129.3 13.1 109 133-244 25-138 (226)
15 PF00027 cNMP_binding: Cyclic 99.6 1.1E-14 2.4E-19 109.4 10.9 86 141-229 1-91 (91)
16 KOG0614|consensus 99.6 2E-15 4.4E-20 141.1 5.9 117 108-227 146-262 (732)
17 smart00100 cNMP Cyclic nucleot 99.6 9.4E-14 2E-18 109.1 14.1 110 123-233 1-115 (120)
18 KOG1113|consensus 99.5 1.1E-13 2.4E-18 124.0 9.0 138 88-229 188-351 (368)
19 PLN02868 acyl-CoA thioesterase 99.5 8.3E-13 1.8E-17 127.3 13.8 112 114-230 6-121 (413)
20 TIGR03697 NtcA_cyano global ni 99.5 8.4E-13 1.8E-17 113.9 12.5 99 147-248 1-106 (193)
21 PRK09391 fixK transcriptional 99.5 1.5E-12 3.3E-17 115.7 14.1 108 134-247 33-145 (230)
22 PRK13918 CRP/FNR family transc 99.4 1.1E-11 2.3E-16 107.9 13.4 96 138-243 5-107 (202)
23 KOG0616|consensus 98.8 7.2E-10 1.6E-14 98.1 -0.2 83 274-359 68-166 (355)
24 KOG2968|consensus 98.7 2.5E-08 5.4E-13 99.3 6.5 113 130-245 499-616 (1158)
25 PF04831 Popeye: Popeye protei 98.4 2.7E-05 5.9E-10 62.6 15.6 118 127-244 15-136 (153)
26 KOG2968|consensus 98.1 2.1E-05 4.6E-10 79.0 11.3 118 120-245 104-230 (1158)
27 PRK11832 putative DNA-binding 98.1 0.00018 3.9E-09 61.7 14.5 108 132-243 15-124 (207)
28 KOG0592|consensus 97.8 1.6E-06 3.6E-11 82.8 -2.4 81 276-360 99-197 (604)
29 KOG0605|consensus 97.6 2.5E-05 5.3E-10 74.8 2.3 98 259-360 139-264 (550)
30 KOG0598|consensus 97.6 6.6E-06 1.4E-10 75.3 -1.7 96 260-359 24-147 (357)
31 KOG0610|consensus 97.3 2.4E-05 5.3E-10 72.7 -2.8 82 276-359 103-201 (459)
32 KOG3542|consensus 97.3 0.00067 1.4E-08 66.5 6.7 119 106-227 271-391 (1283)
33 KOG0694|consensus 96.9 5.7E-05 1.2E-09 74.4 -4.3 96 260-359 367-490 (694)
34 KOG0575|consensus 96.4 0.00028 6.2E-09 68.7 -3.2 82 276-359 44-140 (592)
35 KOG3542|consensus 96.0 0.0093 2E-07 58.8 5.0 106 101-217 22-127 (1283)
36 KOG0612|consensus 96.0 0.0015 3.3E-08 68.1 -0.3 99 258-359 72-197 (1317)
37 KOG0608|consensus 93.2 0.0074 1.6E-07 59.6 -3.5 80 278-359 657-751 (1034)
38 KOG0690|consensus 92.5 0.02 4.3E-07 52.3 -1.5 80 276-359 194-290 (516)
39 KOG0615|consensus 92.2 0.018 3.9E-07 54.1 -2.3 82 277-360 199-299 (475)
40 KOG0695|consensus 91.5 0.035 7.5E-07 50.9 -1.2 81 277-359 277-373 (593)
41 PF07883 Cupin_2: Cupin domain 91.2 1.8 4E-05 29.9 7.8 67 142-215 3-70 (71)
42 cd05628 STKc_NDR1 Catalytic do 90.5 0.015 3.3E-07 55.1 -4.9 59 299-359 49-123 (363)
43 cd05625 STKc_LATS1 Catalytic d 89.3 0.021 4.5E-07 54.5 -5.0 78 278-359 29-123 (382)
44 cd05599 STKc_NDR_like Catalyti 88.1 0.032 7E-07 52.7 -4.6 78 278-359 29-123 (364)
45 cd05627 STKc_NDR2 Catalytic do 87.7 0.034 7.4E-07 52.6 -4.7 59 299-359 49-123 (360)
46 cd05626 STKc_LATS2 Catalytic d 87.6 0.036 7.8E-07 52.9 -4.6 78 278-359 29-123 (381)
47 cd05629 STKc_NDR_like_fungal C 87.3 0.034 7.5E-07 52.9 -4.9 59 299-359 49-123 (377)
48 cd05621 STKc_ROCK2 Catalytic d 87.3 0.039 8.4E-07 52.6 -4.6 59 299-359 91-164 (370)
49 cd05596 STKc_ROCK Catalytic do 86.8 0.045 9.8E-07 52.1 -4.4 59 299-359 91-164 (370)
50 cd05622 STKc_ROCK1 Catalytic d 86.8 0.038 8.2E-07 52.6 -4.9 59 299-359 91-164 (371)
51 cd05598 STKc_LATS Catalytic do 84.7 0.065 1.4E-06 50.9 -4.4 60 299-359 49-123 (376)
52 PTZ00263 protein kinase A cata 83.6 0.074 1.6E-06 49.6 -4.5 59 299-359 66-140 (329)
53 KOG0585|consensus 83.1 0.18 3.9E-06 48.5 -2.1 62 299-360 156-233 (576)
54 cd05573 STKc_ROCK_NDR_like Cat 82.9 0.095 2.1E-06 49.1 -4.1 60 299-359 49-123 (350)
55 PRK13290 ectC L-ectoine syntha 82.5 7.9 0.00017 30.7 7.4 68 140-215 38-106 (125)
56 KOG0595|consensus 82.3 0.087 1.9E-06 49.5 -4.4 80 277-360 37-132 (429)
57 cd05571 STKc_PKB Catalytic dom 82.1 0.08 1.7E-06 49.2 -4.9 59 299-359 43-117 (323)
58 cd05612 STKc_PRKX_like Catalyt 82.1 0.084 1.8E-06 48.2 -4.7 59 299-359 49-123 (291)
59 KOG0580|consensus 80.7 0.43 9.3E-06 42.0 -0.5 99 260-360 21-147 (281)
60 PF05899 Cupin_3: Protein of u 80.6 3.1 6.8E-05 29.5 4.1 42 144-187 14-55 (74)
61 KOG0986|consensus 79.4 0.25 5.4E-06 47.4 -2.5 82 276-359 211-309 (591)
62 cd05600 STKc_Sid2p_Dbf2p Catal 78.8 0.15 3.2E-06 47.6 -4.4 59 299-359 49-123 (333)
63 cd05585 STKc_YPK1_like Catalyt 77.7 0.16 3.5E-06 46.8 -4.3 59 299-359 41-115 (312)
64 cd05631 STKc_GRK4 Catalytic do 76.6 0.18 4E-06 45.8 -4.3 61 299-359 48-124 (285)
65 cd05593 STKc_PKB_gamma Catalyt 76.6 0.17 3.7E-06 47.2 -4.6 59 299-359 43-117 (328)
66 cd05595 STKc_PKB_beta Catalyti 76.4 0.18 3.8E-06 46.9 -4.5 58 300-359 44-117 (323)
67 KOG2378|consensus 75.3 2.6 5.6E-05 40.3 2.9 45 182-229 1-46 (573)
68 PTZ00426 cAMP-dependent protei 75.1 0.18 3.9E-06 47.3 -4.8 59 299-359 79-153 (340)
69 cd05607 STKc_GRK7 Catalytic do 74.1 0.24 5.2E-06 44.8 -4.2 60 300-359 42-117 (277)
70 cd05601 STKc_CRIK Catalytic do 73.8 0.22 4.7E-06 46.3 -4.6 61 299-359 49-124 (330)
71 cd05597 STKc_DMPK_like Catalyt 72.6 0.22 4.7E-06 46.5 -5.0 61 299-359 49-124 (331)
72 TIGR03037 anthran_nbaC 3-hydro 71.1 18 0.00039 29.9 6.5 65 145-218 36-104 (159)
73 cd05605 STKc_GRK4_like Catalyt 70.8 0.39 8.4E-06 43.6 -3.6 60 300-359 49-124 (285)
74 cd05604 STKc_SGK3 Catalytic do 70.2 0.28 6.1E-06 45.5 -4.8 52 306-359 51-118 (325)
75 KOG0032|consensus 70.0 0.33 7.1E-06 46.5 -4.4 78 277-359 62-157 (382)
76 cd05624 STKc_MRCK_beta Catalyt 69.9 0.25 5.4E-06 46.1 -5.2 61 299-359 49-124 (331)
77 cd05620 STKc_nPKC_delta Cataly 69.9 0.32 7E-06 45.0 -4.4 46 312-359 61-118 (316)
78 COG1917 Uncharacterized conser 69.0 11 0.00024 29.7 5.0 51 139-190 45-96 (131)
79 cd05587 STKc_cPKC Catalytic do 68.7 0.35 7.6E-06 44.9 -4.5 58 300-359 49-123 (324)
80 cd07839 STKc_CDK5 Catalytic do 68.6 0.41 8.9E-06 43.1 -3.9 60 300-359 48-121 (284)
81 cd05588 STKc_aPKC Catalytic do 67.7 0.34 7.4E-06 45.1 -4.8 59 299-359 43-118 (329)
82 cd05617 STKc_aPKC_zeta Catalyt 67.6 0.3 6.5E-06 45.4 -5.1 59 299-359 43-118 (327)
83 cd08227 PK_STRAD_alpha Pseudok 66.8 0.37 8.1E-06 44.7 -4.7 61 299-359 47-123 (327)
84 KOG0696|consensus 65.6 1.6 3.5E-05 41.6 -0.6 80 277-359 376-472 (683)
85 cd05582 STKc_RSK_N N-terminal 65.5 0.81 1.8E-05 42.2 -2.7 59 300-359 47-120 (318)
86 cd05584 STKc_p70S6K Catalytic 65.4 0.84 1.8E-05 42.3 -2.6 59 299-359 48-122 (323)
87 cd05632 STKc_GRK5 Catalytic do 64.8 0.47 1E-05 43.0 -4.3 61 299-359 48-124 (285)
88 cd07869 STKc_PFTAIRE1 Catalyti 64.8 0.89 1.9E-05 41.6 -2.5 60 300-359 52-125 (303)
89 cd08216 PK_STRAD Pseudokinase 64.5 0.43 9.3E-06 43.8 -4.7 61 300-360 48-124 (314)
90 cd05608 STKc_GRK1 Catalytic do 64.5 0.59 1.3E-05 42.3 -3.8 61 299-359 41-119 (280)
91 cd07848 STKc_CDKL5 Catalytic d 64.3 0.5 1.1E-05 42.7 -4.3 60 300-359 49-122 (287)
92 cd05575 STKc_SGK Catalytic dom 64.2 0.43 9.3E-06 44.3 -4.8 52 306-359 51-118 (323)
93 KOG0579|consensus 64.1 1.3 2.7E-05 44.6 -1.7 60 300-360 78-153 (1187)
94 cd05590 STKc_nPKC_eta Catalyti 63.5 0.52 1.1E-05 43.7 -4.4 47 312-359 61-118 (320)
95 cd05618 STKc_aPKC_iota Catalyt 63.0 0.49 1.1E-05 44.1 -4.7 59 299-359 43-118 (329)
96 KOG0198|consensus 62.9 1.7 3.8E-05 40.2 -1.0 60 299-359 62-139 (313)
97 cd05615 STKc_cPKC_alpha Cataly 62.7 0.51 1.1E-05 43.8 -4.6 44 314-359 68-123 (323)
98 smart00835 Cupin_1 Cupin. This 62.3 50 0.0011 26.6 7.8 75 139-219 32-112 (146)
99 cd05623 STKc_MRCK_alpha Cataly 62.3 0.46 9.9E-06 44.3 -5.1 61 299-359 49-124 (332)
100 cd05591 STKc_nPKC_epsilon Cata 62.2 0.57 1.2E-05 43.4 -4.4 47 312-359 61-118 (321)
101 cd05580 STKc_PKA Catalytic dom 61.2 0.57 1.2E-05 42.5 -4.5 60 299-359 49-123 (290)
102 cd05076 PTK_Tyk2_rpt1 Pseudoki 61.1 1.3 2.9E-05 39.8 -2.1 59 301-359 66-139 (274)
103 PHA03207 serine/threonine kina 60.5 1.5 3.2E-05 42.0 -2.0 58 300-359 135-207 (392)
104 cd05586 STKc_Sck1_like Catalyt 59.6 0.6 1.3E-05 43.4 -4.8 45 313-359 62-118 (330)
105 cd05594 STKc_PKB_alpha Catalyt 59.2 0.59 1.3E-05 43.4 -4.9 58 300-359 44-118 (325)
106 cd07871 STKc_PCTAIRE3 Catalyti 59.2 1.3 2.9E-05 40.1 -2.4 60 300-359 52-125 (288)
107 cd05589 STKc_PKN Catalytic dom 59.0 2.2 4.7E-05 39.5 -1.1 44 314-359 69-123 (324)
108 cd07860 STKc_CDK2_3 Catalytic 58.7 1.1 2.5E-05 40.2 -2.9 60 300-359 48-122 (284)
109 cd07856 STKc_Sty1_Hog1 Catalyt 58.6 1.1 2.4E-05 41.7 -3.2 59 299-359 57-130 (328)
110 PHA03209 serine/threonine kina 58.2 1.4 3E-05 41.6 -2.6 59 301-359 107-179 (357)
111 cd07844 STKc_PCTAIRE_like Cata 57.4 1.5 3.3E-05 39.6 -2.3 60 300-359 52-125 (291)
112 cd07853 STKc_NLK Catalytic dom 57.3 0.94 2E-05 42.9 -3.9 17 343-359 109-125 (372)
113 cd05602 STKc_SGK1 Catalytic do 57.0 2 4.2E-05 39.8 -1.7 45 314-359 63-118 (325)
114 cd05592 STKc_nPKC_theta_delta 56.8 0.85 1.8E-05 42.2 -4.2 45 313-359 62-118 (316)
115 COG3718 IolB Uncharacterized e 55.8 34 0.00074 30.0 5.7 78 139-219 31-112 (270)
116 PRK13264 3-hydroxyanthranilate 55.0 38 0.00082 28.5 5.7 56 155-218 52-110 (177)
117 cd05570 STKc_PKC Catalytic dom 54.9 0.86 1.9E-05 42.2 -4.5 46 312-359 61-118 (318)
118 cd05603 STKc_SGK2 Catalytic do 54.6 2.4 5.2E-05 39.2 -1.6 44 314-359 63-118 (321)
119 cd05572 STKc_cGK_PKG Catalytic 54.6 1 2.2E-05 40.0 -4.0 60 299-359 41-115 (262)
120 PHA03210 serine/threonine kina 53.9 2.5 5.4E-05 42.1 -1.7 61 299-359 211-289 (501)
121 cd05630 STKc_GRK6 Catalytic do 53.8 0.96 2.1E-05 41.0 -4.3 61 299-359 48-124 (285)
122 cd07859 STKc_TDY_MAPK_plant Ca 53.5 1.3 2.9E-05 41.0 -3.5 17 343-359 109-125 (338)
123 cd05616 STKc_cPKC_beta Catalyt 53.2 0.92 2E-05 42.0 -4.6 44 314-359 68-123 (323)
124 PLN00009 cyclin-dependent kina 52.9 1.8 3.8E-05 39.3 -2.7 60 300-359 50-124 (294)
125 KOG1345|consensus 52.8 3.4 7.4E-05 37.3 -0.8 46 315-360 90-144 (378)
126 PHA03212 serine/threonine kina 52.3 2 4.3E-05 41.2 -2.6 17 343-359 188-204 (391)
127 cd05064 PTKc_EphR_A10 Catalyti 52.0 2.2 4.8E-05 38.0 -2.2 45 315-359 74-129 (266)
128 cd07833 STKc_CDKL Catalytic do 51.4 2 4.3E-05 38.6 -2.6 60 299-359 48-122 (288)
129 PF12973 Cupin_7: ChrR Cupin-l 50.8 95 0.0021 22.6 6.9 63 139-214 26-88 (91)
130 COG0662 {ManC} Mannose-6-phosp 50.6 59 0.0013 25.6 6.1 47 139-186 38-85 (127)
131 cd05614 STKc_MSK2_N N-terminal 50.5 2.3 5E-05 39.5 -2.4 44 314-359 72-127 (332)
132 cd05084 PTKc_Fes Catalytic dom 50.0 2.7 5.9E-05 37.0 -1.9 59 301-359 43-116 (252)
133 cd05123 STKc_AGC Catalytic dom 49.9 1.1 2.4E-05 39.3 -4.5 60 299-359 41-115 (250)
134 cd08226 PK_STRAD_beta Pseudoki 49.8 2.6 5.7E-05 39.0 -2.1 48 312-359 64-123 (328)
135 cd05078 PTK_Jak2_Jak3_rpt1 Pse 49.8 2.6 5.6E-05 37.4 -2.1 60 301-360 49-123 (258)
136 cd05077 PTK_Jak1_rpt1 Pseudoki 49.8 3.4 7.4E-05 36.8 -1.3 17 343-359 111-127 (262)
137 PRK11171 hypothetical protein; 49.0 1E+02 0.0022 27.8 8.1 71 139-216 63-135 (266)
138 PLN00034 mitogen-activated pro 48.8 2.6 5.5E-05 39.6 -2.4 59 300-359 121-190 (353)
139 TIGR03214 ura-cupin putative a 48.3 1.1E+02 0.0024 27.5 8.2 70 140-216 61-132 (260)
140 PTZ00024 cyclin-dependent prot 48.0 3 6.5E-05 38.7 -2.1 57 301-359 70-141 (335)
141 cd06611 STKc_SLK_like Catalyti 47.7 2.8 6E-05 37.6 -2.3 59 301-359 52-125 (280)
142 KOG0984|consensus 47.6 4 8.6E-05 35.4 -1.1 75 277-356 73-167 (282)
143 KOG0597|consensus 46.5 2.8 6.1E-05 41.6 -2.5 59 299-359 49-122 (808)
144 cd07842 STKc_CDK8_like Catalyt 46.0 2.1 4.6E-05 39.1 -3.4 60 300-359 51-130 (316)
145 cd07872 STKc_PCTAIRE2 Catalyti 45.9 2.7 5.9E-05 38.4 -2.6 17 343-359 110-126 (309)
146 PRK09943 DNA-binding transcrip 45.9 87 0.0019 26.4 6.9 66 143-215 113-179 (185)
147 cd07843 STKc_CDC2L1 Catalytic 45.6 1.6 3.5E-05 39.5 -4.2 40 320-359 79-128 (293)
148 KOG0581|consensus 45.0 1.8 4E-05 40.3 -3.8 65 293-359 121-201 (364)
149 cd07846 STKc_CDKL2_3 Catalytic 44.9 2.3 5E-05 38.2 -3.3 60 299-359 48-122 (286)
150 KOG0600|consensus 44.7 5.5 0.00012 39.0 -0.8 45 315-359 186-240 (560)
151 cd05113 PTKc_Btk_Bmx Catalytic 44.5 3.7 8.1E-05 36.3 -1.9 59 301-359 49-122 (256)
152 cd05610 STKc_MASTL Catalytic d 44.4 1.4 3.1E-05 45.5 -5.2 60 299-359 52-126 (669)
153 cd05619 STKc_nPKC_theta Cataly 43.7 2.9 6.4E-05 38.6 -2.8 45 314-359 63-118 (316)
154 cd07873 STKc_PCTAIRE1 Catalyti 43.3 3.3 7.2E-05 37.7 -2.5 59 301-359 54-126 (301)
155 KOG4236|consensus 42.5 4.1 9E-05 40.2 -2.0 68 290-359 604-686 (888)
156 KOG0583|consensus 42.3 3.9 8.5E-05 39.0 -2.2 58 301-360 69-143 (370)
157 cd07861 STKc_CDK1_euk Catalyti 42.0 2.6 5.5E-05 37.9 -3.5 60 300-359 48-123 (285)
158 cd05114 PTKc_Tec_Rlk Catalytic 41.8 3.8 8.2E-05 36.2 -2.3 59 301-359 49-122 (256)
159 cd05046 PTK_CCK4 Pseudokinase 41.4 4 8.7E-05 36.4 -2.2 59 301-359 58-139 (275)
160 KOG0603|consensus 41.4 7 0.00015 39.2 -0.7 48 312-359 381-437 (612)
161 cd05609 STKc_MAST Catalytic do 40.8 2.1 4.6E-05 39.1 -4.2 58 300-359 50-123 (305)
162 cd05574 STKc_phototropin_like 40.2 1.7 3.7E-05 39.8 -5.0 60 300-359 50-125 (316)
163 cd07847 STKc_CDKL1_4 Catalytic 39.9 2.3 4.9E-05 38.2 -4.1 58 301-359 50-122 (286)
164 PTZ00267 NIMA-related protein 39.9 3.5 7.6E-05 40.7 -3.1 17 343-359 175-191 (478)
165 cd05579 STKc_MAST_like Catalyt 39.1 1.8 4E-05 38.1 -4.8 59 300-359 42-115 (265)
166 PRK04190 glucose-6-phosphate i 38.9 1.5E+02 0.0033 25.3 7.2 49 139-187 70-131 (191)
167 cd06642 STKc_STK25-YSK1 Cataly 38.6 5.2 0.00011 35.8 -2.0 43 315-359 70-123 (277)
168 cd05118 STKc_CMGC Catalytic do 38.2 2.1 4.6E-05 38.3 -4.6 46 314-359 65-120 (283)
169 cd05577 STKc_GRK Catalytic dom 37.9 2.9 6.4E-05 37.5 -3.7 60 300-359 42-117 (277)
170 PF11699 CENP-C_C: Mif2/CENP-C 37.6 75 0.0016 23.2 4.4 29 158-187 34-62 (85)
171 cd07832 STKc_CCRK Catalytic do 37.5 2.6 5.7E-05 37.8 -4.1 60 300-359 48-121 (286)
172 cd06631 STKc_YSK4 Catalytic do 37.4 5.1 0.00011 35.5 -2.2 43 315-359 70-124 (265)
173 COG3450 Predicted enzyme of th 37.3 1.3E+02 0.0028 23.4 5.9 42 143-186 51-92 (116)
174 PF08006 DUF1700: Protein of u 36.9 83 0.0018 26.4 5.3 55 53-112 7-63 (181)
175 cd08219 STKc_Nek3 Catalytic do 36.1 4.9 0.00011 35.4 -2.5 46 314-359 65-122 (255)
176 PHA03211 serine/threonine kina 36.0 4.4 9.6E-05 39.8 -3.0 60 300-359 209-282 (461)
177 cd05578 STKc_Yank1 Catalytic d 35.3 2.3 5E-05 37.5 -4.8 59 300-359 49-122 (258)
178 cd05148 PTKc_Srm_Brk Catalytic 35.3 7 0.00015 34.5 -1.7 60 300-359 51-126 (261)
179 cd06630 STKc_MEKK1 Catalytic d 35.2 5.6 0.00012 35.2 -2.3 17 343-359 109-125 (268)
180 cd05059 PTKc_Tec_like Catalyti 35.2 5.9 0.00013 34.9 -2.1 59 301-359 49-122 (256)
181 cd07841 STKc_CDK7 Catalytic do 35.1 7.1 0.00015 35.3 -1.7 47 313-359 68-124 (298)
182 cd07835 STKc_CDK1_like Catalyt 34.9 3.6 7.9E-05 36.9 -3.6 60 300-359 47-121 (283)
183 cd06640 STKc_MST4 Catalytic do 34.4 5.4 0.00012 35.7 -2.6 57 301-359 52-123 (277)
184 PF04962 KduI: KduI/IolB famil 34.3 1.1E+02 0.0024 27.6 5.9 77 139-217 29-107 (261)
185 KOG0663|consensus 34.1 8.9 0.00019 35.7 -1.1 62 296-359 120-199 (419)
186 PF06865 DUF1255: Protein of u 33.9 1.6E+02 0.0035 22.0 5.6 61 142-212 28-89 (94)
187 KOG0582|consensus 33.7 6.9 0.00015 37.8 -2.0 61 299-359 72-148 (516)
188 TIGR02451 anti_sig_ChrR anti-s 33.5 92 0.002 27.1 5.1 69 138-219 128-198 (215)
189 cd05041 PTKc_Fes_like Catalyti 33.3 6.1 0.00013 34.6 -2.4 60 300-359 41-115 (251)
190 cd06645 STKc_MAP4K3 Catalytic 33.0 5.5 0.00012 35.3 -2.7 43 315-359 74-128 (267)
191 PRK10579 hypothetical protein; 32.7 2.1E+02 0.0046 21.4 7.3 60 142-211 28-88 (94)
192 TIGR01479 GMP_PMI mannose-1-ph 32.6 2.2E+02 0.0049 28.0 8.3 69 140-215 379-448 (468)
193 TIGR03404 bicupin_oxalic bicup 31.6 1.3E+02 0.0028 28.6 6.2 50 139-188 69-122 (367)
194 cd06633 STKc_TAO3 Catalytic do 31.5 6.1 0.00013 36.3 -2.8 59 301-359 71-143 (313)
195 cd06619 PKc_MKK5 Catalytic dom 31.3 5.2 0.00011 35.9 -3.2 58 300-359 48-117 (279)
196 cd06609 STKc_MST3_like Catalyt 31.2 6 0.00013 35.3 -2.8 43 315-359 67-120 (274)
197 cd05581 STKc_PDK1 Catalytic do 31.1 3.4 7.4E-05 36.8 -4.5 60 299-359 49-124 (280)
198 cd06612 STKc_MST1_2 Catalytic 30.4 8.2 0.00018 33.8 -2.1 47 313-359 64-121 (256)
199 cd06658 STKc_PAK5 Catalytic do 30.0 7 0.00015 35.5 -2.6 43 315-359 87-140 (292)
200 cd05052 PTKc_Abl Catalytic dom 29.9 7.8 0.00017 34.3 -2.3 17 343-359 110-126 (263)
201 PF07697 7TMR-HDED: 7TM-HD ext 29.9 56 0.0012 28.2 3.2 58 99-157 146-206 (222)
202 PF14377 DUF4414: Domain of un 29.7 1.1E+02 0.0024 23.4 4.4 54 59-112 49-105 (108)
203 cd07870 STKc_PFTAIRE2 Catalyti 29.4 8.1 0.00017 34.8 -2.3 17 343-359 109-125 (291)
204 cd05072 PTKc_Lyn Catalytic dom 29.4 8.5 0.00018 33.9 -2.1 61 299-359 49-125 (261)
205 cd07829 STKc_CDK_like Catalyti 29.3 5.3 0.00011 35.6 -3.5 17 343-359 104-120 (282)
206 cd06641 STKc_MST3 Catalytic do 29.0 6.5 0.00014 35.2 -3.0 57 301-359 52-123 (277)
207 cd06625 STKc_MEKK3_like Cataly 28.8 7.9 0.00017 34.1 -2.4 17 343-359 110-126 (263)
208 PRK11171 hypothetical protein; 28.7 3.5E+02 0.0076 24.3 8.3 50 138-188 185-235 (266)
209 cd07849 STKc_ERK1_2_like Catal 28.6 16 0.00034 33.9 -0.6 17 343-359 112-128 (336)
210 KOG4645|consensus 28.3 14 0.0003 40.6 -1.0 80 277-360 1262-1357(1509)
211 cd00192 PTKc Catalytic domain 28.2 9.2 0.0002 33.4 -2.1 17 343-359 111-127 (262)
212 cd05611 STKc_Rim15_like Cataly 28.2 13 0.00029 32.6 -1.1 17 343-359 103-119 (260)
213 cd05576 STKc_RPK118_like Catal 28.2 11 0.00023 33.0 -1.7 17 343-359 91-107 (237)
214 cd05063 PTKc_EphR_A2 Catalytic 27.3 11 0.00023 33.4 -1.9 17 343-359 113-129 (268)
215 cd06659 STKc_PAK6 Catalytic do 27.2 8.4 0.00018 35.1 -2.6 58 300-359 67-139 (297)
216 cd06650 PKc_MEK1 Catalytic dom 27.1 7.5 0.00016 36.1 -3.0 58 300-359 52-126 (333)
217 cd05055 PTKc_PDGFR Catalytic d 26.7 9.1 0.0002 34.9 -2.5 45 315-359 107-163 (302)
218 cd06628 STKc_MAPKKK_Byr2_like 26.6 9.2 0.0002 33.8 -2.4 17 343-359 112-128 (267)
219 TIGR03404 bicupin_oxalic bicup 26.5 3.8E+02 0.0083 25.5 8.4 48 139-186 247-299 (367)
220 cd06646 STKc_MAP4K5 Catalytic 26.4 8.3 0.00018 34.1 -2.8 17 343-359 112-128 (267)
221 cd08221 STKc_Nek9 Catalytic do 26.2 9.8 0.00021 33.4 -2.3 60 300-359 48-123 (256)
222 cd05112 PTKc_Itk Catalytic dom 25.8 10 0.00022 33.3 -2.3 45 315-359 67-122 (256)
223 cd06607 STKc_TAO Catalytic dom 25.8 12 0.00027 34.0 -1.8 60 300-359 64-137 (307)
224 cd05065 PTKc_EphR_B Catalytic 25.8 10 0.00022 33.6 -2.3 17 343-359 112-128 (269)
225 cd06615 PKc_MEK Catalytic doma 25.3 9.2 0.0002 34.9 -2.7 58 300-359 48-122 (308)
226 cd05085 PTKc_Fer Catalytic dom 24.7 10 0.00023 33.1 -2.4 17 343-359 99-115 (250)
227 PF00190 Cupin_1: Cupin; Inte 24.7 1.6E+02 0.0034 23.6 4.8 49 140-188 37-96 (144)
228 KOG0033|consensus 24.5 8.2 0.00018 34.4 -2.9 59 300-360 59-133 (355)
229 cd06643 STKc_SLK Catalytic dom 24.1 9.3 0.0002 34.2 -2.9 17 343-359 109-125 (282)
230 COG3837 Uncharacterized conser 23.8 4.2E+02 0.0091 21.9 6.9 48 142-190 47-96 (161)
231 cd06655 STKc_PAK2 Catalytic do 23.8 11 0.00024 34.3 -2.5 58 300-359 65-137 (296)
232 cd06644 STKc_STK10_LOK Catalyt 23.6 10 0.00022 34.2 -2.8 45 315-359 77-132 (292)
233 cd08224 STKc_Nek6_Nek7 Catalyt 23.2 6.9 0.00015 34.5 -3.9 17 343-359 112-128 (267)
234 KOG1758|consensus 23.1 3.1E+02 0.0068 22.4 5.9 31 198-228 99-129 (159)
235 cd07864 STKc_CDK12 Catalytic d 23.0 15 0.00032 33.2 -1.9 17 343-359 122-138 (302)
236 PF07545 Vg_Tdu: Vestigial/Ton 22.9 55 0.0012 19.1 1.2 18 18-35 6-23 (33)
237 KOG0661|consensus 22.9 19 0.0004 35.2 -1.2 80 277-359 37-132 (538)
238 PF10047 DUF2281: Protein of u 22.6 71 0.0015 22.0 2.0 25 57-81 6-30 (66)
239 cd05066 PTKc_EphR_A Catalytic 22.6 12 0.00026 33.1 -2.5 17 343-359 112-128 (267)
240 cd06656 STKc_PAK3 Catalytic do 22.2 13 0.00027 33.8 -2.5 58 300-359 65-137 (297)
241 KOG0574|consensus 22.1 13 0.00028 34.1 -2.3 57 300-356 77-148 (502)
242 KOG0611|consensus 21.9 13 0.00028 35.6 -2.4 81 275-359 78-175 (668)
243 cd06649 PKc_MEK2 Catalytic dom 21.9 11 0.00023 35.0 -3.0 59 300-359 52-126 (331)
244 cd06629 STKc_MAPKKK_Bck1_like 21.8 14 0.00031 32.7 -2.1 17 343-359 114-130 (272)
245 cd06613 STKc_MAP4K3_like Catal 21.6 11 0.00025 33.0 -2.8 45 315-359 68-123 (262)
246 cd06657 STKc_PAK4 Catalytic do 21.2 12 0.00026 33.9 -2.8 43 315-359 85-138 (292)
247 cd05102 PTKc_VEGFR3 Catalytic 21.2 28 0.0006 32.2 -0.4 17 343-359 180-196 (338)
248 PF06052 3-HAO: 3-hydroxyanthr 20.9 3.6E+02 0.0077 22.1 5.9 55 156-218 52-109 (151)
249 KOG0194|consensus 20.8 16 0.00035 35.9 -2.1 62 299-360 209-285 (474)
250 TIGR02272 gentisate_1_2 gentis 20.7 4.2E+02 0.0091 24.9 7.2 75 142-225 255-329 (335)
251 cd06917 STKc_NAK1_like Catalyt 20.2 20 0.00044 31.8 -1.5 17 343-359 107-123 (277)
No 1
>KOG0614|consensus
Probab=100.00 E-value=3.6e-40 Score=304.62 Aligned_cols=264 Identities=20% Similarity=0.245 Sum_probs=213.0
Q ss_pred CCCcccHHHHHhhCCHhHHHH------------------------HHHHHHHHHhccCcccccCCHHHHHHHHHhcceEE
Q psy9025 88 SSSSEDENKILNNLPLKLKTD------------------------VAINVHIQTLSKVQLFQDCDEALLRELVLKLRPVL 143 (361)
Q Consensus 88 ~~~~~~e~~ll~~lp~~Lr~~------------------------i~~~~~~~~l~~~~~f~~l~~~~l~~l~~~l~~~~ 143 (361)
.+..++|.++|.+++...--+ ...+.+.+||+++|+|.+++++.+.++++.++..+
T Consensus 220 ~gtvFGELAILynctRtAsV~alt~~~lWaidR~vFq~IM~~tg~~r~~~~~~fLrsv~~~q~l~Ee~L~KiaD~le~~~ 299 (732)
T KOG0614|consen 220 AGTVFGELAILYNCTRTASVRALTDVRLWAIDREVFQAIMMRTGLERHEQYMNFLRSVPLFQNLPEELLLKIADVLEEEY 299 (732)
T ss_pred CchhhhHHHHHhCCcchhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHHHHHHHHHHHh
Confidence 345678889999999665111 12335789999999999999999999999999999
Q ss_pred eCCCCEEEeCCCCCCeEEEEEeeEEEEE------eCcEEEEEeCCCCeechhhhhcccCCCceeeEEEecce-EEEEEEe
Q psy9025 144 YLPGDYICRKGEVGKEMYIVKTGQVQVV------SGETVLATLTEGSVFGEISLLALAGTNRRTADVRSHGF-SNLFVLN 216 (361)
Q Consensus 144 ~~~ge~I~~~G~~~~~ly~I~~G~v~v~------~~~~~~~~l~~Gd~fGe~~ll~~~~~~~~~~~v~A~~~-~~~~~l~ 216 (361)
|..|++|+++|+.++.+|+|.+|.|.+. +.+..++.+..||+|||.+|+. ...|+++++|..+ ++|+.|+
T Consensus 300 Yd~g~yIirqge~G~~ffii~~G~V~vtq~~e~~~q~~~lr~l~kGd~FGE~al~~---edvRtAniia~~~gv~cl~lD 376 (732)
T KOG0614|consen 300 YDAGEYIIRQGEKGDTFFIISKGTVKVTQQDEGSTQPQELRTLNKGDYFGERALLG---EDVRTANIIAQAPGVECLTLD 376 (732)
T ss_pred hcCCceEEeecCCCCeEEEEecceEEEeecCCCCCchhHHhhccccchhhHHHhhc---cCccchhhhccCCCceEEEec
Confidence 9999999999999999999999999998 2347789999999999999998 8999999999998 9999999
Q ss_pred HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHhhhhhcCCccccccccccccccCCCCCCC-----------CCcchhHH-H
Q psy9025 217 KDDLNEAIEYYPNAQEVLKKKARQLIKENAARERVSQPKLSTMDASSVLLDRKGEEPKQ-----------APKLLPIV-M 284 (361)
Q Consensus 217 ~~~f~~ll~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----------~~~~l~~~-~ 284 (361)
++.|..+++...++.+.-.....++... ....+.........+.++....+.|+++.+ ..+++|.+ |
T Consensus 377 resF~~liG~l~~l~ek~~~D~~r~A~~-~~~~~~~~e~a~v~l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK 455 (732)
T KOG0614|consen 377 RESFKKLIGDLEELKEKDYGDEERRASV-VIKEDFAEEFAQVKLSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKK 455 (732)
T ss_pred HHHHHHhcccHHHhhhhhccchhhhhhh-HHHHHHHhhhcccchhhhhhhhhcccCccceEEEEEecccchHHHHHHHhH
Confidence 9999999998888875333333333111 101111112233345566666666665533 24678999 8
Q ss_pred hhcccCcccchhhhccCcccccCcccc----cccccccccccCchhhhh-------hhccCCCC-CCCC----ccceeeh
Q psy9025 285 QVVPQNSMASKLLRCGSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQTPTG-HNNS----FECQVTV 348 (361)
Q Consensus 285 ~~i~~~~~~~~vl~~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~~~~~-~~~~----~~a~v~~ 348 (361)
++|+++.|++|| .+||+||..|+++ +||||+|++|+|||||+| +|+ ++| ||+. ++|||++
T Consensus 456 ~hIVdtkQqeHv--~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmEaClGGElWTiLr--dRg~Fdd~tarF~~acv~E 531 (732)
T KOG0614|consen 456 KHIVDTKQQEHV--FSERNIMMECRSDFIVRLYRTFRDSKYVYMLMEACLGGELWTILR--DRGSFDDYTARFYVACVLE 531 (732)
T ss_pred hhccchhHHHHH--HhHHHHHHhcCchHHHHHHHHhccchhhhhhHHhhcCchhhhhhh--hcCCcccchhhhhHHHHHH
Confidence 999999999999 9999999999988 899999999999999999 577 455 4444 3999999
Q ss_pred hhhhhhhcccc
Q psy9025 349 HREDIHESHIT 359 (361)
Q Consensus 349 a~~~lH~~~i~ 359 (361)
||+|||++|||
T Consensus 532 AfeYLH~k~iI 542 (732)
T KOG0614|consen 532 AFEYLHRKGII 542 (732)
T ss_pred HHHHHHhcCce
Confidence 99999999998
No 2
>KOG0500|consensus
Probab=100.00 E-value=1.9e-35 Score=271.88 Aligned_cols=223 Identities=45% Similarity=0.720 Sum_probs=203.0
Q ss_pred cCCCCcccc---cceeecceeeeehhhHHHHHhhhhhhcccchHHHHHHHHHHHHHHHHHH------hhHHHHHHHHHHH
Q psy9025 5 PRNNETEAN---TWLRKESVPEQVRGDIESGVDEDEEYHDSDSEKERRERFIQERIRHLAH------VFTERAQKIKRIL 75 (361)
Q Consensus 5 ~~~~~~~~~---~~l~g~~vfayiiG~i~s~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~~------~~~~l~~~i~~y~ 75 (361)
|..+.+-++ -.|+|+.+||-++|+|+|++.++|+.... ||++|+.+++ +++.++.||.+||
T Consensus 204 P~t~~ey~F~I~d~LiGvliFAtIvG~VGsmVtnmna~r~E----------Fq~~mDGiK~YM~~RkV~~~lq~rVikwf 273 (536)
T KOG0500|consen 204 PVTSSEYAFVIVDTLIGVLIFATIVGNVGSMVTNMNAARTE----------FQAKMDGIKQYMRYRKVPKALQTRVIKWF 273 (536)
T ss_pred CCcCchhhHHHHHHHHHHHHHhhhhccHhHHHHhhhHHHHH----------HHHHHHHHHHHHHHhcccHHHHHHHHHHH
Confidence 555555444 48899999999999999999999999999 8888888866 5578899999999
Q ss_pred hCCCCCCCCCcCCCCcccHHHHHhhCCHhHHHHHHHHHHHHHhccCcccccCCHHHHHHHHHhcceEEeCCCCEEEeCCC
Q psy9025 76 DFPPTPSSSTTLSSSSEDENKILNNLPLKLKTDVAINVHIQTLSKVQLFQDCDEALLRELVLKLRPVLYLPGDYICRKGE 155 (361)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~e~~ll~~lp~~Lr~~i~~~~~~~~l~~~~~f~~l~~~~l~~l~~~l~~~~~~~ge~I~~~G~ 155 (361)
+|.|. +++..||+++++.||+.|+.+++.+.+.+.|+++++|+.+.+.++.+++..+++..|.|||+|++.||
T Consensus 274 dYlwa-------~~~~~DEeevl~~LP~kL~aeIA~nvh~dTLkkV~iF~~ce~~lL~elVLklk~qvfSPgDyICrKGd 346 (536)
T KOG0500|consen 274 DYLWA-------HKKIVDEEEVLKLLPDKLKAEIAINVHLDTLKKVRIFQDCEAGLLVELVLKLKPQVFSPGDYICRKGD 346 (536)
T ss_pred HHHHh-------ccccccHHHHHHhCCHHHHhHhHHHHHHHHHHhhhHHHhcchhHHHHHHHHhcceeeCCCCeEEecCc
Confidence 99999 77788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCeEEEEEeeEEEEEeC--cEEEEEeCCCCeechhhhhcccC---CCceeeEEEecceEEEEEEeHHHHHHHHHHCHHH
Q psy9025 156 VGKEMYIVKTGQVQVVSG--ETVLATLTEGSVFGEISLLALAG---TNRRTADVRSHGFSNLFVLNKDDLNEAIEYYPNA 230 (361)
Q Consensus 156 ~~~~ly~I~~G~v~v~~~--~~~~~~l~~Gd~fGe~~ll~~~~---~~~~~~~v~A~~~~~~~~l~~~~f~~ll~~~p~~ 230 (361)
.+.+||||.+|.+.+..+ ......+++|++|||++++...| +++|++++++++.+++++|+++|+.+++.+||+.
T Consensus 347 vgkEMyIVk~G~L~Vv~dDg~t~~~~L~~G~~FGEisIlni~g~~~gNRRtanvrSvGYSDlfvLskdDl~~aL~eYP~a 426 (536)
T KOG0500|consen 347 VGKEMYIVKEGKLAVVADDGVTVFVTLKAGSVFGEISILNIKGNKNGNRRTANVRSVGYSDLFVLSKDDLWEALSEYPDA 426 (536)
T ss_pred ccceEEEEEccEEEEEecCCcEEEEEecCCceeeeeEEEEEcCcccCCcceeeeeeeccceeeEeeHHHHHHHHHhCCHH
Confidence 999999999999999954 47789999999999999998765 6889999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHH
Q psy9025 231 QEVLKKKARQLIKE 244 (361)
Q Consensus 231 ~~~~~~~~~~~l~~ 244 (361)
+..+.....+.+.+
T Consensus 427 ~~~L~~kgr~iL~k 440 (536)
T KOG0500|consen 427 RKRLEEKGRQILHK 440 (536)
T ss_pred HHHHHHHHHHHhhh
Confidence 88877666655544
No 3
>KOG0498|consensus
Probab=100.00 E-value=6.9e-34 Score=280.33 Aligned_cols=218 Identities=23% Similarity=0.393 Sum_probs=194.7
Q ss_pred ecCCCCcccc---cceeecceeeeehhhHHHHHhhhhhhcccchHHH-HHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCC
Q psy9025 4 YPRNNETEAN---TWLRKESVPEQVRGDIESGVDEDEEYHDSDSEKE-RRERFIQERIRHLAHVFTERAQKIKRILDFPP 79 (361)
Q Consensus 4 ~~~~~~~~~~---~~l~g~~vfayiiG~i~s~~~~~~~~~~~~~~~~-~~~~~~q~~~~~~~~~~~~l~~~i~~y~~~~~ 79 (361)
-|.|..|.++ .||+|.++|||+|||++++++........+..+. +.+.+ .+-+++|+++++||++|++|.|
T Consensus 315 ~s~~~~E~iFsi~~mi~GllL~A~lIGNmt~~iqs~tsR~~~~r~k~rd~e~~-----m~~~~LP~~LRqRi~~y~q~kw 389 (727)
T KOG0498|consen 315 HANNMGEKIFSIFIMLFGLLLFAYLIGNMTALLQSLTSRTEEMRDKMRDAEQW-----MSRRQLPPDLRQRIRRYEQYKW 389 (727)
T ss_pred CCCCcHHHHHHHHHHHHhHHHHHHHHhhHHHhHHHHhHHHHHHHHHHHHHHHH-----HHhccCCHHHHHHHHHHHHHHH
Confidence 3566666644 5899999999999999999999998777744443 33333 4446799999999999999999
Q ss_pred CCCCCCcCCCCcccHHHHHhhCCHhHHHHHHHHHHHHHhccCcccccCCHHHHHHHHHhcceEEeCCCCEEEeCCCCCCe
Q psy9025 80 TPSSSTTLSSSSEDENKILNNLPLKLKTDVAINVHIQTLSKVQLFQDCDEALLRELVLKLRPVLYLPGDYICRKGEVGKE 159 (361)
Q Consensus 80 ~~~~~~~~~~~~~~e~~ll~~lp~~Lr~~i~~~~~~~~l~~~~~f~~l~~~~l~~l~~~l~~~~~~~ge~I~~~G~~~~~ 159 (361)
. .++++||+++|++||..||.+|+.+++.++++++|+|+++|+..+.+|+..++..+|.||++|++|||+.+.
T Consensus 390 ~-------~t~Gvdee~lL~~LP~~LR~dI~~hL~~~lv~~vpLF~~md~~~L~al~~rlk~~~f~pge~iireGd~v~~ 462 (727)
T KOG0498|consen 390 L-------ATRGVDEEELLQSLPKDLRRDIKRHLCLDLVRKVPLFAGMDDGLLDALCSRLKPEYFTPGEYIIREGDPVTD 462 (727)
T ss_pred h-------hccCcCHHHHHHhCCHHHHHHHHHHHhHHHHhhCchhhcCCHHHHHHHHHHhhhhccCCCCeEEecCCccce
Confidence 8 779999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEeeEEEEEeCc----EEEEEeCCCCeec-hhhhhcccCC-CceeeEEEecceEEEEEEeHHHHHHHHHHCHHHHHH
Q psy9025 160 MYIVKTGQVQVVSGE----TVLATLTEGSVFG-EISLLALAGT-NRRTADVRSHGFSNLFVLNKDDLNEAIEYYPNAQEV 233 (361)
Q Consensus 160 ly~I~~G~v~v~~~~----~~~~~l~~Gd~fG-e~~ll~~~~~-~~~~~~v~A~~~~~~~~l~~~~f~~ll~~~p~~~~~ 233 (361)
||||.+|.+++.... .....|++||+|| |+..+. . .|.++||+|.+.|+++.|++++|..++++||.+...
T Consensus 463 myFI~rG~le~~~~~~g~~~~~~~L~~Gd~~GeEl~~~~---~~~p~t~TVralt~~el~~L~~~dL~~V~~~f~~~~~~ 539 (727)
T KOG0498|consen 463 MYFIVRGSLESITTDGGGFFVVAILGPGDFFGEELLTWC---LDLPQTRTVRALTYCELFRLSADDLKEVLQQFRRLGSK 539 (727)
T ss_pred eEEEEeeeEEEEEccCCceEEEEEecCCCccchHHHHHH---hcCCCCceeehhhhhhHHhccHHHHHHHHHHhHHHHHH
Confidence 999999999998433 8899999999999 777777 4 777999999999999999999999999999998766
Q ss_pred HHH
Q psy9025 234 LKK 236 (361)
Q Consensus 234 ~~~ 236 (361)
+.+
T Consensus 540 ~l~ 542 (727)
T KOG0498|consen 540 FLQ 542 (727)
T ss_pred HHH
Confidence 555
No 4
>KOG0499|consensus
Probab=99.97 E-value=2e-31 Score=249.19 Aligned_cols=223 Identities=45% Similarity=0.762 Sum_probs=203.8
Q ss_pred cceeecceeeeehhhHHHHHhhhhhhcccchHHHHHHHHHHHHHHHHH--HhhHHHHHHHHHHHhCCCCCCCCCcCCCCc
Q psy9025 14 TWLRKESVPEQVRGDIESGVDEDEEYHDSDSEKERRERFIQERIRHLA--HVFTERAQKIKRILDFPPTPSSSTTLSSSS 91 (361)
Q Consensus 14 ~~l~g~~vfayiiG~i~s~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~--~~~~~l~~~i~~y~~~~~~~~~~~~~~~~~ 91 (361)
.|+.|+-+||.+||-|..++...+.+...+...++ .-+..++ .++.+.++||+.+|+|.|. +++.
T Consensus 436 ~w~mGVFvFslliGQmRDvi~aAt~nq~~fr~~mD------~tl~ym~~~~i~kevqnRVr~WyeyTW~-------sQr~ 502 (815)
T KOG0499|consen 436 NWFMGVFVFSLLIGQMRDVIGAATANQNYFRACMD------DTLAYMNNYSIPKEVQNRVRTWYEYTWD-------SQRM 502 (815)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhccHHHHHHHHH------HHHHHHHhcCCcHHHHHHHHHHHHhhhh-------hhcc
Confidence 69999999999999999999999988888332221 1123333 3778899999999999998 9999
Q ss_pred ccHHHHHhhCCHhHHHHHHHHHHHHHhccCcccccCCHHHHHHHHHhcceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEE
Q psy9025 92 EDENKILNNLPLKLKTDVAINVHIQTLSKVQLFQDCDEALLRELVLKLRPVLYLPGDYICRKGEVGKEMYIVKTGQVQVV 171 (361)
Q Consensus 92 ~~e~~ll~~lp~~Lr~~i~~~~~~~~l~~~~~f~~l~~~~l~~l~~~l~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~ 171 (361)
.||..+|+.||..|+.++++..+...|.++.+|++++.+.+..++..++.+.|-|||.|++.|+.+..||||..|.|.|.
T Consensus 503 LDEs~ll~~LP~klq~dlAi~V~y~~lSKVqLFq~Cdr~mirDmllrLRsV~yLPgDfVCkKGeiGkEMYIIk~GqvQVl 582 (815)
T KOG0499|consen 503 LDESDLLKTLPTKLQLDLAIDVNYSILSKVQLFQGCDRQMIRDMLLRLRSVLYLPGDFVCKKGEIGKEMYIIKHGQVQVL 582 (815)
T ss_pred ccHHHHHHhcchhheeeeeEEeehhhhhHHHHhhhhHHHHHHHHHHHhhceeecCCceeeecccccceeEEeecceEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eC---cEEEEEeCCCCeechhhhhcccCCCceeeEEEecceEEEEEEeHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHhh
Q psy9025 172 SG---ETVLATLTEGSVFGEISLLALAGTNRRTADVRSHGFSNLFVLNKDDLNEAIEYYPNAQEVLKKKARQLIKENAAR 248 (361)
Q Consensus 172 ~~---~~~~~~l~~Gd~fGe~~ll~~~~~~~~~~~v~A~~~~~~~~l~~~~f~~ll~~~p~~~~~~~~~~~~~l~~~~~~ 248 (361)
|+ +.++..|.+|++|||++|+...|+++|+++|+|.+.|.+++|+++++++++..||+.+..+++.++..++++.++
T Consensus 583 GGp~~~~Vl~tL~~GsVFGEISLLaigG~nRRTAnV~a~Gf~nLfvL~KkdLneil~~YP~sq~iLrkkAr~llk~nak~ 662 (815)
T KOG0499|consen 583 GGPDGTKVLVTLKAGSVFGEISLLAIGGGNRRTANVVAHGFANLFVLDKKDLNEILVHYPDSQRILRKKARVLLKQNAKT 662 (815)
T ss_pred cCCCCCEEEEEecccceeeeeeeeeecCCCccchhhhhcccceeeEecHhHHHHHHHhCccHHHHHHHHHHHHHHhcccc
Confidence 64 489999999999999999998889999999999999999999999999999999999999999999999887764
Q ss_pred h
Q psy9025 249 E 249 (361)
Q Consensus 249 ~ 249 (361)
.
T Consensus 663 ~ 663 (815)
T KOG0499|consen 663 A 663 (815)
T ss_pred c
Confidence 3
No 5
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.97 E-value=4.6e-30 Score=266.52 Aligned_cols=221 Identities=21% Similarity=0.295 Sum_probs=196.9
Q ss_pred eecCCCCcccc---cceeecceeeeehhhHHHHHhhhhhhcccchHHHHHHHHHHHHHHHH------HHhhHHHHHHHHH
Q psy9025 3 IYPRNNETEAN---TWLRKESVPEQVRGDIESGVDEDEEYHDSDSEKERRERFIQERIRHL------AHVFTERAQKIKR 73 (361)
Q Consensus 3 ~~~~~~~~~~~---~~l~g~~vfayiiG~i~s~~~~~~~~~~~~~~~~~~~~~~q~~~~~~------~~~~~~l~~~i~~ 73 (361)
|+|.|..|+.+ .||+|+++|||++|+|++++.+.+..... ++++++.+ +++|..+++||++
T Consensus 270 i~p~t~~E~i~~i~~ml~g~~~~a~~ig~i~~li~~~~~~~~~----------f~~~~~~~~~ym~~~~lp~~lq~ri~~ 339 (823)
T PLN03192 270 LHAVNTIEMIFIIFYMLFNLGLTAYLIGNMTNLVVEGTRRTME----------FRNSIEAASNFVGRNRLPPRLKDQILA 339 (823)
T ss_pred cCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 67999999865 58899999999999999999998876666 33333333 4588999999999
Q ss_pred HHhCCCCCCCCCcCCCCcccHHHHHhhCCHhHHHHHHHHHHHHHhccCcccccCCHHHHHHHHHhcceEEeCCCCEEEeC
Q psy9025 74 ILDFPPTPSSSTTLSSSSEDENKILNNLPLKLKTDVAINVHIQTLSKVQLFQDCDEALLRELVLKLRPVLYLPGDYICRK 153 (361)
Q Consensus 74 y~~~~~~~~~~~~~~~~~~~e~~ll~~lp~~Lr~~i~~~~~~~~l~~~~~f~~l~~~~l~~l~~~l~~~~~~~ge~I~~~ 153 (361)
|++|.|.. ...+++++++.||+.||.++..+++.++++++++|++++++++..|+..++.+.|.|||.|+.+
T Consensus 340 y~~~~~~~--------~~~~~~~~l~~Lp~~Lr~~i~~~l~~~~l~~~~lF~~~s~~~l~~L~~~~~~~~~~pge~I~~q 411 (823)
T PLN03192 340 YMCLRFKA--------ESLNQQQLIDQLPKSICKSICQHLFLPVVEKVYLFKGVSREILLLLVTKMKAEYIPPREDVIMQ 411 (823)
T ss_pred HHHHHHhh--------ccccHHHHHHHcCHHHHHHHHHHHHHHHHhhCcchhcCCHHHHHHHHHhhheeeeCCCCEEEEC
Confidence 99999862 3467899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCeEEEEEeeEEEEE----eCcEEEEEeCCCCeechhhhhcccCCCceeeEEEecceEEEEEEeHHHHHHHHHHCHH
Q psy9025 154 GEVGKEMYIVKTGQVQVV----SGETVLATLTEGSVFGEISLLALAGTNRRTADVRSHGFSNLFVLNKDDLNEAIEYYPN 229 (361)
Q Consensus 154 G~~~~~ly~I~~G~v~v~----~~~~~~~~l~~Gd~fGe~~ll~~~~~~~~~~~v~A~~~~~~~~l~~~~f~~ll~~~p~ 229 (361)
|+.++.+|||.+|.|++. +++.++..+++|++|||.+++. +.+++++++|.++|+++.|++++|.++++.+|+
T Consensus 412 ge~~~~lY~I~~G~V~i~~~~~~~e~~l~~l~~Gd~FGE~~~l~---~~p~~~t~ra~~~s~ll~l~~~~f~~ll~~~p~ 488 (823)
T PLN03192 412 NEAPDDVYIVVSGEVEIIDSEGEKERVVGTLGCGDIFGEVGALC---CRPQSFTFRTKTLSQLLRLKTSTLIEAMQTRQE 488 (823)
T ss_pred CCCCceEEEEEecEEEEEEecCCcceeeEEccCCCEecchHHhc---CCCCCCeEEEcccEEEEEEEHHHHHHHHHHhhH
Confidence 999999999999999997 3457889999999999999998 899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHH
Q psy9025 230 AQEVLKKKARQLIKE 244 (361)
Q Consensus 230 ~~~~~~~~~~~~l~~ 244 (361)
....+.+...++.++
T Consensus 489 d~~~i~~~~l~~~~~ 503 (823)
T PLN03192 489 DNVVILKNFLQHHKE 503 (823)
T ss_pred HHHHHHHHHHHHhhh
Confidence 988777666665543
No 6
>KOG0501|consensus
Probab=99.86 E-value=2e-22 Score=188.85 Aligned_cols=222 Identities=18% Similarity=0.311 Sum_probs=194.3
Q ss_pred eecCCCCcccc---cceeecceeeeehhhHHHHHhhhhhhcccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCC
Q psy9025 3 IYPRNNETEAN---TWLRKESVPEQVRGDIESGVDEDEEYHDSDSEKERRERFIQERIRHLAHVFTERAQKIKRILDFPP 79 (361)
Q Consensus 3 ~~~~~~~~~~~---~~l~g~~vfayiiG~i~s~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~l~~~i~~y~~~~~ 79 (361)
|-|.-+-||++ -|++|+.+||-++|+++.+++.+.+....+.+.....+- ..++.++|+.|.+||-+|.--.|
T Consensus 443 iA~~TD~EKiF~v~mMii~aLLYAtIFG~vTTI~QQM~s~T~rYHeMlnnVRe----FlKL~evPK~LsERVMDYvVSTW 518 (971)
T KOG0501|consen 443 IAPNTDNEKIFGVCMMIIGALLYATIFGHVTTIIQQMTSNTNRYHEMLNNVRE----FLKLYEVPKGLSERVMDYVVSTW 518 (971)
T ss_pred cCCCccHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhHHHHHHHHHHHH----HHHHHhccHHHHHHHHHHHHHHh
Confidence 34555556644 599999999999999999999999988886665444432 23456799999999988887777
Q ss_pred CCCCCCcCCCCcccHHHHHhhCCHhHHHHHHHHHHHHHhccCcccccCCHHHHHHHHHhcceEEeCCCCEEEeCCCCCCe
Q psy9025 80 TPSSSTTLSSSSEDENKILNNLPLKLKTDVAINVHIQTLSKVQLFQDCDEALLRELVLKLRPVLYLPGDYICRKGEVGKE 159 (361)
Q Consensus 80 ~~~~~~~~~~~~~~e~~ll~~lp~~Lr~~i~~~~~~~~l~~~~~f~~l~~~~l~~l~~~l~~~~~~~ge~I~~~G~~~~~ 159 (361)
. ..+++|.+++|.-+|..+|.+++.+++++.+...|-|+-.++..++.|+-.+...+..|||.|+..|+..|.
T Consensus 519 a-------MtkGiDTeKVL~~CPKDMkADICVHLNRKVFnEHpaFRLASDGCLRaLAm~f~~~H~APGDLlYHtGESvDa 591 (971)
T KOG0501|consen 519 A-------MTKGIDTEKVLGYCPKDMKADICVHLNRKVFNEHPAFRLASDGCLRALAMEFQTNHCAPGDLLYHTGESVDA 591 (971)
T ss_pred h-------hhcCcCHHHHhhhCccccccceeeecchhhhccCcceeeccchhHHHHHHHHHhccCCCcceeeecCCccce
Confidence 6 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEeeEEEEEeCcEEEEEeCCCCeechhhhhcccCCCceeeEEEecceEEEEEEeHHHHHHHHHHCHHHHHHHHH
Q psy9025 160 MYIVKTGQVQVVSGETVLATLTEGSVFGEISLLALAGTNRRTADVRSHGFSNLFVLNKDDLNEAIEYYPNAQEVLKK 236 (361)
Q Consensus 160 ly~I~~G~v~v~~~~~~~~~l~~Gd~fGe~~ll~~~~~~~~~~~v~A~~~~~~~~l~~~~f~~ll~~~p~~~~~~~~ 236 (361)
++||++|.+++..++.++.+|+.||+||+.-.-.. .-....++|+|++.|.+..|.++.+.+++.-|..++..|.+
T Consensus 592 LcFvVsGSLEVIQDDEVVAILGKGDVFGD~FWK~~-t~~qs~ANVRALTYcDLH~IKrd~Ll~VLdFYtAFanSFaR 667 (971)
T KOG0501|consen 592 LCFVVSGSLEVIQDDEVVAILGKGDVFGDEFWKEN-TLGQSAANVRALTYCDLHMIKRDKLLKVLDFYTAFANSFAR 667 (971)
T ss_pred EEEEEecceEEeecCcEEEEeecCccchhHHhhhh-hhhhhhhhhhhhhhhhhhHHhHHHHHHHHHHHHHHHHHhhh
Confidence 99999999999999999999999999999755431 13456789999999999999999999999988888776654
No 7
>COG2905 Predicted signal-transduction protein containing cAMP-binding and CBS domains [Signal transduction mechanisms]
Probab=99.86 E-value=1.2e-21 Score=184.50 Aligned_cols=231 Identities=18% Similarity=0.191 Sum_probs=184.4
Q ss_pred HHHHHhccCcccccCCHHHHHHHHHhcceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEEe-CcEEEEEeCCCCeechhhh
Q psy9025 113 VHIQTLSKVQLFQDCDEALLRELVLKLRPVLYLPGDYICRKGEVGKEMYIVKTGQVQVVS-GETVLATLTEGSVFGEISL 191 (361)
Q Consensus 113 ~~~~~l~~~~~f~~l~~~~l~~l~~~l~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~-~~~~~~~l~~Gd~fGe~~l 191 (361)
...+|+.++|+|+.|+++++.+|...++..+|.+|+.|+..|.+.+++|+|.+|.|+++. +..++..+..||.||..++
T Consensus 4 ~~~~Fl~~~pPF~~L~~eel~~L~~~l~v~yy~kge~ii~~~~p~~~l~vi~kG~vev~~~~g~v~~~~~~gdlFg~~~l 83 (610)
T COG2905 4 EPDQFLQQHPPFSQLPAEELEQLMGALEVKYYRKGEIIIYAGSPVHYLYVIRKGVVEVRSDGGEVLDRLAAGDLFGFSSL 83 (610)
T ss_pred CHHHHHhcCCCcccCCHHHHHHHHhhhccccccCCCeeecCCCCcceeEEEEeceeeEEcCCCeeeeeeccCccccchhh
Confidence 346899999999999999999999999999999999999999999999999999999884 4468999999999999999
Q ss_pred hcccCCCceeeEEEecceEEEEEEeHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHhhhhhc--CCccccccccccccccC
Q psy9025 192 LALAGTNRRTADVRSHGFSNLFVLNKDDLNEAIEYYPNAQEVLKKKARQLIKENAARERVS--QPKLSTMDASSVLLDRK 269 (361)
Q Consensus 192 l~~~~~~~~~~~v~A~~~~~~~~l~~~~f~~ll~~~p~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~l~~~~~~ 269 (361)
++ +......+.|.+|+.||.||++.|.+++.++|.++.++....+.|++....+.... .....+++.++...++.
T Consensus 84 ~~---~~~~~~~~~aeedsl~y~lp~s~F~ql~~~n~~f~~ff~~~~akR~~~~~~~~~eq~~~e~~~trv~~~~~~~~~ 160 (610)
T COG2905 84 FT---ELNKQRYMAAEEDSLCYLLPKSVFMQLMEENPEFADFFLRSLAKRLRDIADRLAEQGESEFILTRVGEVKTLPAV 160 (610)
T ss_pred cc---cCCCcceeEeeccceEEecCHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHhcCCCc
Confidence 98 66667778889999999999999999999999999999999999998766544432 34566788999999999
Q ss_pred CCCCCCCCcchhHHHhhcccCcccchhhhcc---------CcccccC-cccccccccccccccCchhhhhhhccCCCCCC
Q psy9025 270 GEEPKQAPKLLPIVMQVVPQNSMASKLLRCG---------SKSLNKR-PHRRVNRSASADTYFHPKQQRRLLHQTPTGHN 339 (361)
Q Consensus 270 ~~~~~~~~~~l~~~~~~i~~~~~~~~vl~~~---------ek~i~~~-~~~~~~~t~~d~~~~~~l~~~~~~~~~~~~~~ 339 (361)
.+.+. ..++.+.++|.+.|..+.++... +||++.+ .++..+.|.+++.+|+.-+-+.-.+.-.
T Consensus 161 ~v~~~---~~i~~aa~km~~~gv~s~v~l~~~~~~~GIvT~~dl~~~v~~~g~~~~~~V~evmT~p~~svd~~~~~---- 233 (610)
T COG2905 161 TVSPQ---ASIQDAARKMKDEGVSSLVVLDDSGPLLGIVTRKDLRSRVIADGRSKTQKVSEVMTSPVISVDRGDFL---- 233 (610)
T ss_pred ccCcc---CcHHHHHHHHHhcCCCeEEEEcCCCCccceeehHHHHHHHHhcCCCcccchhhhhccCceeecCcchH----
Confidence 99884 44888889999988874443332 2555554 4444556777777776543322222111
Q ss_pred CCccceeehhhhhhhh
Q psy9025 340 NSFECQVTVHREDIHE 355 (361)
Q Consensus 340 ~~~~a~v~~a~~~lH~ 355 (361)
|.|.+.|....||.
T Consensus 234 --feAml~m~r~~I~h 247 (610)
T COG2905 234 --FEAMLMMLRNRIKH 247 (610)
T ss_pred --HHHHHHHHHhCCce
Confidence 37777777777764
No 8
>PRK09392 ftrB transcriptional activator FtrB; Provisional
Probab=99.76 E-value=2.9e-17 Score=146.63 Aligned_cols=129 Identities=19% Similarity=0.235 Sum_probs=120.2
Q ss_pred HHHhccCcccccCCHHHHHHHHHhcceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEE----eCcEEEEEeCCCCeechhh
Q psy9025 115 IQTLSKVQLFQDCDEALLRELVLKLRPVLYLPGDYICRKGEVGKEMYIVKTGQVQVV----SGETVLATLTEGSVFGEIS 190 (361)
Q Consensus 115 ~~~l~~~~~f~~l~~~~l~~l~~~l~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~----~~~~~~~~l~~Gd~fGe~~ 190 (361)
.++++.+++|+.|+++++..+....+.+.|++|+.|+++|+.++.+|+|.+|.|+++ +++.++..+++|++||+.+
T Consensus 6 ~~~l~~~~~f~~L~~~~~~~l~~~~~~~~~~~ge~l~~~g~~~~~~~~v~~G~v~~~~~~~~~~~~i~~~~~g~~~g~~~ 85 (236)
T PRK09392 6 LIRLRNLPLFADMADATFERLMRGAFLQRFPPGTMLITEGEPADFLFVVLDGLVELSASSQDRETTLAILRPVSTFILAA 85 (236)
T ss_pred HHHHhcCccccCCCHHHHHHHHhhcceeecCCCCEEEeCCCccceEEEEEeCEEEEEEcCCCceEEEEEeCCCchhhhHH
Confidence 468899999999999999999999999999999999999999999999999999998 5668899999999999999
Q ss_pred hhcccCCCceeeEEEecceEEEEEEeHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
Q psy9025 191 LLALAGTNRRTADVRSHGFSNLFVLNKDDLNEAIEYYPNAQEVLKKKARQLIKENA 246 (361)
Q Consensus 191 ll~~~~~~~~~~~v~A~~~~~~~~l~~~~f~~ll~~~p~~~~~~~~~~~~~l~~~~ 246 (361)
++. +.++.++++|.++|+++.||+++|.+++.++|.+...+...+..++....
T Consensus 86 ~~~---~~~~~~~~~A~~~~~~~~i~~~~~~~l~~~~p~l~~~~~~~l~~~~~~~~ 138 (236)
T PRK09392 86 VVL---DAPYLMSARTLTRSRVLMIPAELVREAMSEDPGFMRAVVFELAGCYRGLV 138 (236)
T ss_pred HhC---CCCCceEEEEcCceEEEEEeHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
Confidence 997 78999999999999999999999999999999999988888777766544
No 9
>PRK11753 DNA-binding transcriptional dual regulator Crp; Provisional
Probab=99.68 E-value=1.7e-15 Score=132.70 Aligned_cols=120 Identities=18% Similarity=0.304 Sum_probs=108.0
Q ss_pred ccCCHHHHHHHHHhcceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEE-----eCcEEEEEeCCCCeechhhhhcccCCCc
Q psy9025 125 QDCDEALLRELVLKLRPVLYLPGDYICRKGEVGKEMYIVKTGQVQVV-----SGETVLATLTEGSVFGEISLLALAGTNR 199 (361)
Q Consensus 125 ~~l~~~~l~~l~~~l~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~-----~~~~~~~~l~~Gd~fGe~~ll~~~~~~~ 199 (361)
+.++++.++.++..+....|++|++|+.+|++.+.+|||.+|.++++ |++..+..+++|++||+.+++.. ..+
T Consensus 6 ~~~~~~~~~~l~~~~~~~~~~kg~~l~~~g~~~~~~y~V~~G~v~~~~~~~~g~~~~~~~~~~g~~~g~~~~~~~--~~~ 83 (211)
T PRK11753 6 KPQTDPTLEWFLSHCHIHKYPAKSTLIHAGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEE--GQE 83 (211)
T ss_pred CCCCHHHHHHHHhhCeEEEeCCCCEEEeCCCCCCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEEeehhhccC--CCC
Confidence 56899999999999999999999999999999999999999999988 45678899999999999999861 346
Q ss_pred eeeEEEecceEEEEEEeHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
Q psy9025 200 RTADVRSHGFSNLFVLNKDDLNEAIEYYPNAQEVLKKKARQLIKENA 246 (361)
Q Consensus 200 ~~~~v~A~~~~~~~~l~~~~f~~ll~~~p~~~~~~~~~~~~~l~~~~ 246 (361)
+.++++|.++|.++.|++++|.+++..+|.+...+.+.+.+++....
T Consensus 84 ~~~~~~a~~~~~v~~i~~~~~~~l~~~~p~~~~~~~~~~~~~l~~~~ 130 (211)
T PRK11753 84 RSAWVRAKTACEVAEISYKKFRQLIQVNPDILMALSAQMARRLQNTS 130 (211)
T ss_pred ceEEEEEcCcEEEEEEcHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
Confidence 88899999999999999999999999999998887777777765544
No 10
>cd00038 CAP_ED effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO sensor. In all cases binding of the effector leads to conformational changes and the ability to activate transcription. Cyclic nucleotide-binding domain similar to CAP are also present in cAMP- and cGMP-dependent protein kinases (cAPK and cGPK) and vertebrate cyclic nucleotide-gated ion-channels. Cyclic nucleotide-monophosphate binding domain; proteins that bind cyclic nucleotides (cAMP or cGMP) share a structural domain of about 120 residues; the best studied is the prokaryotic catabolite gene activator, CAP, where such a domain is known to be composed of three alpha-helices and a distinctive eight-stranded, antiparallel beta-barrel structure; three conserved glycine residues are thought to be essential for maintenance of
Probab=99.65 E-value=3.4e-15 Score=116.69 Aligned_cols=109 Identities=34% Similarity=0.563 Sum_probs=101.4
Q ss_pred ccccCCHHHHHHHHHhcceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEE-----eCcEEEEEeCCCCeechhhhhcccCC
Q psy9025 123 LFQDCDEALLRELVLKLRPVLYLPGDYICRKGEVGKEMYIVKTGQVQVV-----SGETVLATLTEGSVFGEISLLALAGT 197 (361)
Q Consensus 123 ~f~~l~~~~l~~l~~~l~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~-----~~~~~~~~l~~Gd~fGe~~ll~~~~~ 197 (361)
+|..++++.+..++..++...|.+|+.|+.+|++.+.+|+|.+|.++++ |++..+..+.+|++||+..++. +
T Consensus 1 ~f~~l~~~~~~~l~~~~~~~~~~~g~~l~~~~~~~~~~~~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~g~~~~~~---~ 77 (115)
T cd00038 1 LFSGLDDEELEELADALEERRFPAGEVIIRQGDPADSLYIVLSGSVEVYKLDEDGREQIVGFLGPGDLFGELALLG---N 77 (115)
T ss_pred CcccCCHHHHHHHHhhceeeeeCCCCEEEcCCCCCCeEEEEEeCEEEEEEECCCCcEEEEEecCCccCcChHHHhc---C
Confidence 5789999999999999999999999999999999999999999999998 2458889999999999999986 7
Q ss_pred CceeeEEEecceEEEEEEeHHHHHHHHHHCHHHHHHH
Q psy9025 198 NRRTADVRSHGFSNLFVLNKDDLNEAIEYYPNAQEVL 234 (361)
Q Consensus 198 ~~~~~~v~A~~~~~~~~l~~~~f~~ll~~~p~~~~~~ 234 (361)
.++..+++|.++|.++.|+.++|..++.++|.+...+
T Consensus 78 ~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 114 (115)
T cd00038 78 GPRSATVRALTDSELLVLPRSDFRRLLQEYPELARRL 114 (115)
T ss_pred CCCCceEEEcCceEEEEEeHHHHHHHHHHCcHhHHhc
Confidence 8899999999999999999999999999999987653
No 11
>COG0664 Crp cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]
Probab=99.63 E-value=1.2e-14 Score=127.05 Aligned_cols=127 Identities=24% Similarity=0.353 Sum_probs=114.3
Q ss_pred ccCcccccCCHHHHHHHHHhcceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEE-----eCcEEEEEeCCCCeechhhhhc
Q psy9025 119 SKVQLFQDCDEALLRELVLKLRPVLYLPGDYICRKGEVGKEMYIVKTGQVQVV-----SGETVLATLTEGSVFGEISLLA 193 (361)
Q Consensus 119 ~~~~~f~~l~~~~l~~l~~~l~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~-----~~~~~~~~l~~Gd~fGe~~ll~ 193 (361)
...+.|..++......+........+++|++|+.+|++++.+|+|.+|.++++ |++.++..+++||+||+.+++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~g~~~~~~y~v~~G~v~~~~~~~~G~~~~~~~~~~g~~fg~~~l~~ 82 (214)
T COG0664 3 KENPLLNLLPSELLELLALKLEVRKLPKGEVLFTEGEEADSLYIILSGIVKLYANTEDGREIILGFLGPGDFFGELALLG 82 (214)
T ss_pred ccccccccCCHHHHHHHhhhceeEeeCCCCEEEcCCCcCceEEEEEEeEEEEEEECCCCcEEEEEEecCCchhhhHHHhc
Confidence 45667777888888888889999999999999999999999999999999998 4568889999999999999997
Q ss_pred ccCCCceeeEEEecceEEEEEEeHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHhh
Q psy9025 194 LAGTNRRTADVRSHGFSNLFVLNKDDLNEAIEYYPNAQEVLKKKARQLIKENAAR 248 (361)
Q Consensus 194 ~~~~~~~~~~v~A~~~~~~~~l~~~~f~~ll~~~p~~~~~~~~~~~~~l~~~~~~ 248 (361)
+.+++++++|.++|+++.++++.|..++.++|.+...+...+.++++.....
T Consensus 83 ---~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~~~~~l~~~~~~ 134 (214)
T COG0664 83 ---GDPRSASAVALTDVEVLEIPRKDFLELLAESPKLALALLRLLARRLRQALER 134 (214)
T ss_pred ---CCCccceEEEcceEEEEEecHHHHHHHHhhCcHHHHHHHHHHHHHHHHHHHH
Confidence 6689999999999999999999999998889999999988888888776544
No 12
>KOG1113|consensus
Probab=99.62 E-value=1.1e-15 Score=136.93 Aligned_cols=117 Identities=21% Similarity=0.360 Sum_probs=109.2
Q ss_pred HHHHHHhccCcccccCCHHHHHHHHHhcceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEEeCcEEEEEeCCCCeechhhh
Q psy9025 112 NVHIQTLSKVQLFQDCDEALLRELVLKLRPVLYLPGDYICRKGEVGKEMYIVKTGQVQVVSGETVLATLTEGSVFGEISL 191 (361)
Q Consensus 112 ~~~~~~l~~~~~f~~l~~~~l~~l~~~l~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~~~~~~~~l~~Gd~fGe~~l 191 (361)
.-...++++.-+|.+|+++++..+.+.|..+.+++|+.|+.||+.++.||+|.+|.++++-+...+..+++|..|||++|
T Consensus 118 ~~L~~a~r~~~LF~~Ld~eq~~~v~dam~~~~v~~G~~Vi~qGdeGd~fYvI~kGt~dVyv~~~~v~~~~~g~sFGElAL 197 (368)
T KOG1113|consen 118 RRLEEAFRKNLLFANLDDEQLSQVLDAMFEKRVKAGETVIKQGDEGDNFYVIDKGTFDVYVNGTYVTTYSPGGSFGELAL 197 (368)
T ss_pred HHHHHHHHhccccccCCHHHHHHHHHhhceeeecCCcEEEecCCcCCcEEEEecceEEEEECCeEEeeeCCCCchhhhHh
Confidence 34567889999999999999999999999999999999999999999999999999999988999999999999999999
Q ss_pred hcccCCCceeeEEEecceEEEEEEeHHHHHHHHHHCHHHH
Q psy9025 192 LALAGTNRRTADVRSHGFSNLFVLNKDDLNEAIEYYPNAQ 231 (361)
Q Consensus 192 l~~~~~~~~~~~v~A~~~~~~~~l~~~~f~~ll~~~p~~~ 231 (361)
.. +.||.+|+.|.+++.+|.|++..|..++-.+-.-.
T Consensus 198 my---n~PRaATv~a~t~~klWgldr~SFrrIi~~s~~kk 234 (368)
T KOG1113|consen 198 MY---NPPRAATVVAKSLKKLWGLDRTSFRRIIMKSCIKK 234 (368)
T ss_pred hh---CCCcccceeeccccceEEEeeceeEEEeeccchhh
Confidence 99 99999999999999999999999998876665443
No 13
>PRK11161 fumarate/nitrate reduction transcriptional regulator; Provisional
Probab=99.61 E-value=1.7e-14 Score=128.59 Aligned_cols=126 Identities=13% Similarity=0.179 Sum_probs=108.6
Q ss_pred hccCcccccCCHHHHHHHHHhcc-eEEeCCCCEEEeCCCCCCeEEEEEeeEEEEE-----eCcEEEEEeCCCCeechhhh
Q psy9025 118 LSKVQLFQDCDEALLRELVLKLR-PVLYLPGDYICRKGEVGKEMYIVKTGQVQVV-----SGETVLATLTEGSVFGEISL 191 (361)
Q Consensus 118 l~~~~~f~~l~~~~l~~l~~~l~-~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~-----~~~~~~~~l~~Gd~fGe~~l 191 (361)
+++.++|..++++++..|..... ...|++|+.|+++|++.+.+|||.+|.|+++ |++.++..+.+|++||+.++
T Consensus 15 ~~~~~~~~~l~~~~l~~L~~~~~~~~~~~kge~l~~~Gd~~~~ly~v~~G~v~~~~~~~~G~e~i~~~~~~gd~~g~~~~ 94 (235)
T PRK11161 15 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAI 94 (235)
T ss_pred ccccccccCCCHHHHHHHHHhhhhceeecCCCEeECCCCCcceEEEEeeceEEEEEECCCCCEEEEEeccCCceeccccc
Confidence 45556566799999999999886 4689999999999999999999999999998 45578888999999999776
Q ss_pred hcccCCCceeeEEEecceEEEEEEeHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHh
Q psy9025 192 LALAGTNRRTADVRSHGFSNLFVLNKDDLNEAIEYYPNAQEVLKKKARQLIKENAA 247 (361)
Q Consensus 192 l~~~~~~~~~~~v~A~~~~~~~~l~~~~f~~ll~~~p~~~~~~~~~~~~~l~~~~~ 247 (361)
+. .....+++|.++|+++.||++.|.+++..+|.+...+...+.+++.....
T Consensus 95 ~~----~~~~~~~~a~~~~~i~~ip~~~f~~l~~~~p~~~~~~~~~~~~~~~~~~~ 146 (235)
T PRK11161 95 GS----GQHPSFAQALETSMVCEIPFETLDDLSGKMPKLRQQIMRLMSGEIKGDQE 146 (235)
T ss_pred cC----CCCcceEEEeccEEEEEEEHHHHHHHHHHChHHHHHHHHHHHHHHHHHHH
Confidence 53 45567899999999999999999999999999998888888777765443
No 14
>PRK10402 DNA-binding transcriptional activator YeiL; Provisional
Probab=99.60 E-value=1e-14 Score=129.29 Aligned_cols=109 Identities=14% Similarity=0.166 Sum_probs=99.2
Q ss_pred HHHHHhcceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEE-----eCcEEEEEeCCCCeechhhhhcccCCCceeeEEEec
Q psy9025 133 RELVLKLRPVLYLPGDYICRKGEVGKEMYIVKTGQVQVV-----SGETVLATLTEGSVFGEISLLALAGTNRRTADVRSH 207 (361)
Q Consensus 133 ~~l~~~l~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~-----~~~~~~~~l~~Gd~fGe~~ll~~~~~~~~~~~v~A~ 207 (361)
..+......+.|++|+.|+.+|++.+.+|||.+|.|+++ |++.++..+.+|++||+.+++. +.++.++++|.
T Consensus 25 ~~i~~~~~~~~~~kge~l~~~G~~~~~~y~V~~G~v~v~~~~~~G~e~~~~~~~~g~~~G~~~~~~---~~~~~~~~~A~ 101 (226)
T PRK10402 25 FDVSADTELFHFLAREYIVQEGQQPSYLFYLTRGRAKLYATLANGKVSLIDFFAAPCFIGEIELID---KDHETKAVQAI 101 (226)
T ss_pred HHHHhhhhheeeCCCCEEEcCCCCCceEEEEEeCEEEEEEECCCCCEeeeeecCCCCeEEeehhhc---CCCCCccEEEe
Confidence 357778999999999999999999999999999999998 5568899999999999999887 88999999999
Q ss_pred ceEEEEEEeHHHHHHHHHHCHHHHHHHHHHHHHHHHH
Q psy9025 208 GFSNLFVLNKDDLNEAIEYYPNAQEVLKKKARQLIKE 244 (361)
Q Consensus 208 ~~~~~~~l~~~~f~~ll~~~p~~~~~~~~~~~~~l~~ 244 (361)
++|+++.+|+++|..++..+|.+...+...+.+++..
T Consensus 102 ~~~~i~~i~~~~~~~ll~~~p~~~~~~~~~l~~~~~~ 138 (226)
T PRK10402 102 EECWCLALPMKDCRPLLLNDALFLRKLCKFLSHKNYR 138 (226)
T ss_pred ccEEEEEEEHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999998887777776543
No 15
>PF00027 cNMP_binding: Cyclic nucleotide-binding domain; InterPro: IPR000595 Proteins that bind cyclic nucleotides (cAMP or cGMP) share a structural domain of about 120 residues [, , ]. The best studied of these proteins is the prokaryotic catabolite gene activator (also known as the cAMP receptor protein) (gene crp) where such a domain is known to be composed of three alpha-helices and a distinctive eight-stranded, antiparallel beta-barrel structure. There are six invariant amino acids in this domain, three of which are glycine residues that are thought to be essential for maintenance of the structural integrity of the beta-barrel. cAMP- and cGMP-dependent protein kinases (cAPK and cGPK) contain two tandem copies of the cyclic nucleotide-binding domain. The cAPK's are composed of two different subunits, a catalytic chain and a regulatory chain, which contains both copies of the domain. The cGPK's are single chain enzymes that include the two copies of the domain in their N-terminal section. Vertebrate cyclic nucleotide-gated ion-channels also contain this domain. Two such cations channels have been fully characterised, one is found in rod cells where it plays a role in visual signal transduction.; PDB: 1O7F_A 2BYV_E 3E97_A 3U10_A 2H6B_A 3SHR_A 2OZ6_A 1WGP_A 3LA2_A 3LA3_B ....
Probab=99.60 E-value=1.1e-14 Score=109.41 Aligned_cols=86 Identities=27% Similarity=0.470 Sum_probs=79.3
Q ss_pred eEEeCCCCEEEeCCCCCCeEEEEEeeEEEEE-----eCcEEEEEeCCCCeechhhhhcccCCCceeeEEEecceEEEEEE
Q psy9025 141 PVLYLPGDYICRKGEVGKEMYIVKTGQVQVV-----SGETVLATLTEGSVFGEISLLALAGTNRRTADVRSHGFSNLFVL 215 (361)
Q Consensus 141 ~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~-----~~~~~~~~l~~Gd~fGe~~ll~~~~~~~~~~~v~A~~~~~~~~l 215 (361)
.+.|++|++|+++|++.+.+|||.+|.+++. ++...+..+.+|++||+.+++. +.++.++++|.++|+++.|
T Consensus 1 ~~~~~~g~~i~~~g~~~~~~~~i~~G~v~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~---~~~~~~~~~a~~~~~~~~i 77 (91)
T PF00027_consen 1 EKTYKKGEVIYRQGDPCDHIYIILSGEVKVSSINEDGKEQIIFFLGPGDIFGEIELLT---GKPSPFTVIALTDSEVLRI 77 (91)
T ss_dssp -EEESTTEEEEETTSBESEEEEEEESEEEEEEETTTSEEEEEEEEETTEEESGHHHHH---TSBBSSEEEESSSEEEEEE
T ss_pred CeEECCCCEEEeCCCcCCEEEEEEECceEEEeceecceeeeecceeeeccccceeecC---CCccEEEEEEccCEEEEEE
Confidence 3689999999999999999999999999998 2235689999999999999998 7799999999999999999
Q ss_pred eHHHHHHHHHHCHH
Q psy9025 216 NKDDLNEAIEYYPN 229 (361)
Q Consensus 216 ~~~~f~~ll~~~p~ 229 (361)
|+++|.++++++|+
T Consensus 78 ~~~~~~~~~~~~p~ 91 (91)
T PF00027_consen 78 PREDFLQLLQQDPE 91 (91)
T ss_dssp EHHHHHHHHHHSHH
T ss_pred eHHHHHHHHHhCcC
Confidence 99999999999995
No 16
>KOG0614|consensus
Probab=99.57 E-value=2e-15 Score=141.13 Aligned_cols=117 Identities=27% Similarity=0.467 Sum_probs=110.9
Q ss_pred HHHHHHHHHHhccCcccccCCHHHHHHHHHhcceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEEeCcEEEEEeCCCCeec
Q psy9025 108 DVAINVHIQTLSKVQLFQDCDEALLRELVLKLRPVLYLPGDYICRKGEVGKEMYIVKTGQVQVVSGETVLATLTEGSVFG 187 (361)
Q Consensus 108 ~i~~~~~~~~l~~~~~f~~l~~~~l~~l~~~l~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~~~~~~~~l~~Gd~fG 187 (361)
.-...+..+.+....++++|+..++.+++++|.+..|.+|+.|+++|++++.+|++.+|.+.|..++..++.+++|.+||
T Consensus 146 ~~~k~lI~dAi~~NdFLknLd~~Qi~e~v~~Myp~~~~~gs~IIrege~Gs~~yV~aeG~~~V~~~g~ll~~m~~gtvFG 225 (732)
T KOG0614|consen 146 VGAKQLIRDAIQKNDFLKNLDASQIKELVDCMYPVEYRAGSWIIREGEPGSHLYVSAEGELQVSREGKLLGKMGAGTVFG 225 (732)
T ss_pred ccHHHHHHHHHHhhHHHHhhhHHHHHHHHHhhCcccccCCcEEEecCCCCceEEEeecceEEEeeCCeeeeccCCchhhh
Confidence 34456778899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcccCCCceeeEEEecceEEEEEEeHHHHHHHHHHC
Q psy9025 188 EISLLALAGTNRRTADVRSHGFSNLFVLNKDDLNEAIEYY 227 (361)
Q Consensus 188 e~~ll~~~~~~~~~~~v~A~~~~~~~~l~~~~f~~ll~~~ 227 (361)
|++++. +.+|+++++|+++|.+|.|+++.|+.++...
T Consensus 226 ELAILy---nctRtAsV~alt~~~lWaidR~vFq~IM~~t 262 (732)
T KOG0614|consen 226 ELAILY---NCTRTASVRALTDVRLWAIDREVFQAIMMRT 262 (732)
T ss_pred HHHHHh---CCcchhhhhhhhhhhHHHHHHHHHHHHHHHH
Confidence 999999 8999999999999999999999999998654
No 17
>smart00100 cNMP Cyclic nucleotide-monophosphate binding domain. Catabolite gene activator protein (CAP) is a prokaryotic homologue of eukaryotic cNMP-binding domains, present in ion channels, and cNMP-dependent kinases.
Probab=99.57 E-value=9.4e-14 Score=109.08 Aligned_cols=110 Identities=32% Similarity=0.532 Sum_probs=98.9
Q ss_pred ccccCCHHHHHHHHHhcceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEE-----eCcEEEEEeCCCCeechhhhhcccCC
Q psy9025 123 LFQDCDEALLRELVLKLRPVLYLPGDYICRKGEVGKEMYIVKTGQVQVV-----SGETVLATLTEGSVFGEISLLALAGT 197 (361)
Q Consensus 123 ~f~~l~~~~l~~l~~~l~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~-----~~~~~~~~l~~Gd~fGe~~ll~~~~~ 197 (361)
+|.+++++.+..++..++...|.+|++|+++|++.+.+|||.+|.++++ +++..+..+.+|++||+..++.. ..
T Consensus 1 ~f~~l~~~~~~~l~~~~~~~~~~~g~~l~~~g~~~~~~y~v~~G~v~~~~~~~~g~~~~~~~~~~g~~~g~~~~~~~-~~ 79 (120)
T smart00100 1 LFKNLDAEELRELADALEPVRYPAGEVIIRQGDVGDSFYIILSGEVRVYKVLEDGREQILGILGPGDFFGELALLTN-SR 79 (120)
T ss_pred CcCCCCHHHHHHHHHhceEEEeCCCCEEEeCCCcCCcEEEEEeeEEEEEEECCCCceEEEEeecCCceechhhhccC-CC
Confidence 5789999999999999999999999999999999999999999999998 34578999999999999999821 15
Q ss_pred CceeeEEEecceEEEEEEeHHHHHHHHHHCHHHHHH
Q psy9025 198 NRRTADVRSHGFSNLFVLNKDDLNEAIEYYPNAQEV 233 (361)
Q Consensus 198 ~~~~~~v~A~~~~~~~~l~~~~f~~ll~~~p~~~~~ 233 (361)
.+...++.|.++|.++.++.+.|...+..+|.+...
T Consensus 80 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 115 (120)
T smart00100 80 RAASATAVALELATLLRIDFRDFLQLLQENPQLLLE 115 (120)
T ss_pred cccceEEEEEeeEEEEccCHHHHHHHHHHhHHHHHH
Confidence 678899999999999999999999999999887544
No 18
>KOG1113|consensus
Probab=99.48 E-value=1.1e-13 Score=124.02 Aligned_cols=138 Identities=21% Similarity=0.299 Sum_probs=123.2
Q ss_pred CCCcccHHHHHhhCCHhH------------------------HHHHHHHHHHHHhccCcccccCCHHHHHHHHHhcceEE
Q psy9025 88 SSSSEDENKILNNLPLKL------------------------KTDVAINVHIQTLSKVQLFQDCDEALLRELVLKLRPVL 143 (361)
Q Consensus 88 ~~~~~~e~~ll~~lp~~L------------------------r~~i~~~~~~~~l~~~~~f~~l~~~~l~~l~~~l~~~~ 143 (361)
.+..|.|-+++.+-|... -......++..+|+++|+++.|...+...+++.+.++.
T Consensus 188 ~g~sFGElALmyn~PRaATv~a~t~~klWgldr~SFrrIi~~s~~kkrkMy~~~l~s~pil~~l~k~er~kv~dal~~k~ 267 (368)
T KOG1113|consen 188 PGGSFGELALMYNPPRAATVVAKSLKKLWGLDRTSFRRIIMKSCIKKRKMYEPFLESVPILESLEKLERAKVADALGTKS 267 (368)
T ss_pred CCCchhhhHhhhCCCcccceeeccccceEEEeeceeEEEeeccchhhhhhhhhhhhcchhhHHHHHHHHHhhhcccceee
Confidence 677889999999999665 11123558899999999999999999999999999999
Q ss_pred eCCCCEEEeCCCCCCeEEEEEeeEEEEE--eCcEEEEEeCCCCeechhhhhcccCCCceeeEEEecceEEEEEEeHHHHH
Q psy9025 144 YLPGDYICRKGEVGKEMYIVKTGQVQVV--SGETVLATLTEGSVFGEISLLALAGTNRRTADVRSHGFSNLFVLNKDDLN 221 (361)
Q Consensus 144 ~~~ge~I~~~G~~~~~ly~I~~G~v~v~--~~~~~~~~l~~Gd~fGe~~ll~~~~~~~~~~~v~A~~~~~~~~l~~~~f~ 221 (361)
|.+|+.|+.+|+.++.+|+|.+|.|.+. +++..+ .++.||+|||.+++. +.+|.++|.|.+...|..++++.|+
T Consensus 268 y~~G~~Vi~qg~~ge~f~~i~eGEvdv~~~~~~v~v-kl~~~dyfge~al~~---~~pr~Atv~a~~~~kc~~~dk~~fe 343 (368)
T KOG1113|consen 268 YKDGERVIVQGDQGEHFYIIEEGEVDVLKKRDGVEV-KLKKGDYFGELALLK---NLPRAATVVAKGRLKCAKLDKPRFE 343 (368)
T ss_pred ccCCceEEeccCCcceEEEecccccchhhccCCeEE-EechhhhcchHHHHh---hchhhceeeccCCceeeeeChHHHH
Confidence 9999999999999999999999999998 334555 999999999999999 8999999999999999999999999
Q ss_pred HHHHHCHH
Q psy9025 222 EAIEYYPN 229 (361)
Q Consensus 222 ~ll~~~p~ 229 (361)
.+++...+
T Consensus 344 rllgpc~d 351 (368)
T KOG1113|consen 344 RLLGPCQD 351 (368)
T ss_pred HHhhHHHH
Confidence 99995444
No 19
>PLN02868 acyl-CoA thioesterase family protein
Probab=99.46 E-value=8.3e-13 Score=127.26 Aligned_cols=112 Identities=22% Similarity=0.269 Sum_probs=101.0
Q ss_pred HHHHhccCcccccCCHHHHHHHHHhcceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEEe----CcEEEEEeCCCCeechh
Q psy9025 114 HIQTLSKVQLFQDCDEALLRELVLKLRPVLYLPGDYICRKGEVGKEMYIVKTGQVQVVS----GETVLATLTEGSVFGEI 189 (361)
Q Consensus 114 ~~~~l~~~~~f~~l~~~~l~~l~~~l~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~----~~~~~~~l~~Gd~fGe~ 189 (361)
...+++++++|++|+++.+..++..++.+.|++|++|+++|+..+.+|||.+|.|+++. ++.++..+++|++||+.
T Consensus 6 ~~~~L~~~~~F~~L~~~~l~~l~~~~~~~~~~~Ge~I~~~Gd~~~~lyiI~~G~V~v~~~~~~ge~~l~~l~~Gd~fG~~ 85 (413)
T PLN02868 6 VVEFLGSVPLLQRLPSSSLKKIAEVVVPKRYGKGEYVVREGEPGDGLYFIWKGEAEVSGPAEEESRPEFLLKRYDYFGYG 85 (413)
T ss_pred HHHHHhcCcccccCCHHHHHHHHHhceEEEECCCCEEEeCCCcCceEEEEEeCEEEEEEECCCCcEEEEEeCCCCEeehh
Confidence 34678899999999999999999999999999999999999999999999999999972 35788899999999975
Q ss_pred hhhcccCCCceeeEEEecceEEEEEEeHHHHHHHHHHCHHH
Q psy9025 190 SLLALAGTNRRTADVRSHGFSNLFVLNKDDLNEAIEYYPNA 230 (361)
Q Consensus 190 ~ll~~~~~~~~~~~v~A~~~~~~~~l~~~~f~~ll~~~p~~ 230 (361)
+. +.++.++++|.++|+++.|+++.|..+...++..
T Consensus 86 --l~---~~~~~~~~~A~~d~~v~~ip~~~~~~~~~~~~~~ 121 (413)
T PLN02868 86 --LS---GSVHSADVVAVSELTCLVLPHEHCHLLSPKSIWD 121 (413)
T ss_pred --hC---CCCcccEEEECCCEEEEEEcHHHHhhhccccccc
Confidence 55 7889999999999999999999999887766543
No 20
>TIGR03697 NtcA_cyano global nitrogen regulator NtcA, cyanobacterial. Members of this protein family, found in the cyanobacteria, are the global nitrogen regulator NtcA. This DNA-binding transcriptional regulator is required for expressing many different ammonia-repressible genes. The consensus NtcA-binding site is G T A N(8)T A C.
Probab=99.46 E-value=8.4e-13 Score=113.94 Aligned_cols=99 Identities=25% Similarity=0.375 Sum_probs=87.4
Q ss_pred CCEEEeCCCCCCeEEEEEeeEEEEE-----eCcEEEEEeCCCCeechhhhhcccCCCc--eeeEEEecceEEEEEEeHHH
Q psy9025 147 GDYICRKGEVGKEMYIVKTGQVQVV-----SGETVLATLTEGSVFGEISLLALAGTNR--RTADVRSHGFSNLFVLNKDD 219 (361)
Q Consensus 147 ge~I~~~G~~~~~ly~I~~G~v~v~-----~~~~~~~~l~~Gd~fGe~~ll~~~~~~~--~~~~v~A~~~~~~~~l~~~~ 219 (361)
|+.|+++|++.+.+|+|.+|.|+++ |++.++..+++|++||+.+++. +.+ +.++++|.++|.++.+|+++
T Consensus 1 g~~l~~~g~~~~~~~~i~~G~v~~~~~~~~G~e~~l~~~~~g~~~G~~~~~~---~~~~~~~~~~~A~~~~~v~~i~~~~ 77 (193)
T TIGR03697 1 GKTIFFPGDPAEKVYFLRRGAVKLSRVYESGEEITVALLRENSVFGVLSLIT---GHRSDRFYHAVAFTRVELLAVPIEQ 77 (193)
T ss_pred CCceecCCCCCCcEEEEEecEEEEEEeCCCCcEeeeEEccCCCEeeeeeecc---CCCCccceEEEEecceEEEEeeHHH
Confidence 7899999999999999999999997 4567799999999999999987 443 45789999999999999999
Q ss_pred HHHHHHHCHHHHHHHHHHHHHHHHHHHhh
Q psy9025 220 LNEAIEYYPNAQEVLKKKARQLIKENAAR 248 (361)
Q Consensus 220 f~~ll~~~p~~~~~~~~~~~~~l~~~~~~ 248 (361)
|..++.++|.+...+.+.+.+++......
T Consensus 78 ~~~l~~~~p~l~~~~~~~l~~~l~~~~~~ 106 (193)
T TIGR03697 78 VEKAIEEDPDLSMLLLQGLSSRILQTEMM 106 (193)
T ss_pred HHHHHHHChHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998888888877665433
No 21
>PRK09391 fixK transcriptional regulator FixK; Provisional
Probab=99.45 E-value=1.5e-12 Score=115.69 Aligned_cols=108 Identities=17% Similarity=0.178 Sum_probs=94.9
Q ss_pred HHHHhcceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEE-----eCcEEEEEeCCCCeechhhhhcccCCCceeeEEEecc
Q psy9025 134 ELVLKLRPVLYLPGDYICRKGEVGKEMYIVKTGQVQVV-----SGETVLATLTEGSVFGEISLLALAGTNRRTADVRSHG 208 (361)
Q Consensus 134 ~l~~~l~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~-----~~~~~~~~l~~Gd~fGe~~ll~~~~~~~~~~~v~A~~ 208 (361)
.+........|++|++|+.+|++++++|||.+|.|+++ |++.++..+.+|++||+. . +.++.++++|.+
T Consensus 33 ~~~~~~~~~~~~kge~l~~~Gd~~~~ly~I~~G~vkl~~~~~~G~e~i~~~~~~Gd~fG~~---~---~~~~~~~~~A~~ 106 (230)
T PRK09391 33 HAGLVASEFSYKKGEEIYGEGEPADYVYQVESGAVRTYRLLSDGRRQIGAFHLPGDVFGLE---S---GSTHRFTAEAIV 106 (230)
T ss_pred cccceeeeEEECCCCEEECCCCCCCeEEEEEeCEEEEEEECCCCcEEEEEEecCCceeccc---C---CCcCCeEEEEcC
Confidence 44556789999999999999999999999999999998 455788899999999964 3 567789999999
Q ss_pred eEEEEEEeHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHh
Q psy9025 209 FSNLFVLNKDDLNEAIEYYPNAQEVLKKKARQLIKENAA 247 (361)
Q Consensus 209 ~~~~~~l~~~~f~~ll~~~p~~~~~~~~~~~~~l~~~~~ 247 (361)
+|.++.|+.+.|.+++..+|.+...+...+.+++.....
T Consensus 107 ds~v~~i~~~~f~~l~~~~p~l~~~l~~~l~~~l~~~~~ 145 (230)
T PRK09391 107 DTTVRLIKRRSLEQAAATDVDVARALLSLTAGGLRHAQD 145 (230)
T ss_pred ceEEEEEEHHHHHHHHhhChHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999888888887775543
No 22
>PRK13918 CRP/FNR family transcriptional regulator; Provisional
Probab=99.37 E-value=1.1e-11 Score=107.89 Aligned_cols=96 Identities=24% Similarity=0.284 Sum_probs=79.1
Q ss_pred hcceEEeCCCCEEEeCCC--CCCeEEEEEeeEEEEE-----eCcEEEEEeCCCCeechhhhhcccCCCceeeEEEecceE
Q psy9025 138 KLRPVLYLPGDYICRKGE--VGKEMYIVKTGQVQVV-----SGETVLATLTEGSVFGEISLLALAGTNRRTADVRSHGFS 210 (361)
Q Consensus 138 ~l~~~~~~~ge~I~~~G~--~~~~ly~I~~G~v~v~-----~~~~~~~~l~~Gd~fGe~~ll~~~~~~~~~~~v~A~~~~ 210 (361)
.++...|++|++|+.+|+ +++.+|+|.+|.|+++ |++.++..+.+||+||+.+++ +.++++++.|.++|
T Consensus 5 ~~~~~~~~kg~~l~~~Gd~~~~~~~y~I~~G~vr~~~~~~~G~e~~l~~~~~Gd~~G~~~~~----~~~~~~~~~A~~~~ 80 (202)
T PRK13918 5 VVDTVTYRPGAVILYPGVPGPSDMLYRVRSGLVRLHTVDDEGNALTLRYVRPGEYFGEEALA----GAERAYFAEAVTDS 80 (202)
T ss_pred ccceeEecCCCEEEcCCCCCCCCeEEEEEeeEEEEEEECCCCCEEEEEEecCCCeechHHhc----CCCCCceEEEcCce
Confidence 467889999999999999 7799999999999998 566889999999999997665 46788999999999
Q ss_pred EEEEEeHHHHHHHHHHCHHHHHHHHHHHHHHHH
Q psy9025 211 NLFVLNKDDLNEAIEYYPNAQEVLKKKARQLIK 243 (361)
Q Consensus 211 ~~~~l~~~~f~~ll~~~p~~~~~~~~~~~~~l~ 243 (361)
+++.|+++.| +|.+...+...+.+++.
T Consensus 81 ~v~~i~~~~~------~~~~~~~l~~~l~~~~~ 107 (202)
T PRK13918 81 RIDVLNPALM------SAEDNLVLTQHLVRTLA 107 (202)
T ss_pred EEEEEEHHHc------ChhhHHHHHHHHHHHHH
Confidence 9999999987 45555444444444433
No 23
>KOG0616|consensus
Probab=98.81 E-value=7.2e-10 Score=98.05 Aligned_cols=83 Identities=10% Similarity=0.082 Sum_probs=70.5
Q ss_pred CCCCcchhHH-HhhcccCcccchhhhccCcccccCcccc----cccccccccccCchhhhh-------hhccCCCCCCCC
Q psy9025 274 KQAPKLLPIV-MQVVPQNSMASKLLRCGSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQTPTGHNNS 341 (361)
Q Consensus 274 ~~~~~~l~~~-~~~i~~~~~~~~vl~~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~~~~~~~~~ 341 (361)
++...++|.+ ++.|+..+|.+|+ .+||++++.+.+| +.-|++|++++||+|+.+ .+++ ..-++|+
T Consensus 68 ~g~yYAmKvL~k~~vVklKQveH~--~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvmeyv~GGElFS~Lrk-~~rF~e~ 144 (355)
T KOG0616|consen 68 SGNYYAMKVLDKQKVVKLKQVEHT--HNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVMEYVPGGELFSYLRK-SGRFSEP 144 (355)
T ss_pred CCceeehhhcCHHHHHHHHHHHHH--hhHHHHHhhccCceeEEEEEeeccCCeEEEEEeccCCccHHHHHHh-cCCCCch
Confidence 3456788888 9999999999999 9999999999988 566999999999999877 4552 2226666
Q ss_pred ----ccceeehhhhhhhhcccc
Q psy9025 342 ----FECQVTVHREDIHESHIT 359 (361)
Q Consensus 342 ----~~a~v~~a~~~lH~~~i~ 359 (361)
|||.|+.|+||||+++|+
T Consensus 145 ~arFYAAeivlAleylH~~~ii 166 (355)
T KOG0616|consen 145 HARFYAAEIVLALEYLHSLDII 166 (355)
T ss_pred hHHHHHHHHHHHHHHHHhcCee
Confidence 499999999999999997
No 24
>KOG2968|consensus
Probab=98.69 E-value=2.5e-08 Score=99.27 Aligned_cols=113 Identities=25% Similarity=0.363 Sum_probs=100.4
Q ss_pred HHHHHHHHhcceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEE-----eCcEEEEEeCCCCeechhhhhcccCCCceeeEE
Q psy9025 130 ALLRELVLKLRPVLYLPGDYICRKGEVGKEMYIVKTGQVQVV-----SGETVLATLTEGSVFGEISLLALAGTNRRTADV 204 (361)
Q Consensus 130 ~~l~~l~~~l~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~-----~~~~~~~~l~~Gd~fGe~~ll~~~~~~~~~~~v 204 (361)
.++..+-..+.+....+|+.++++||.++++|+|.+|.++.. ++..++..++.||.+|+...++ +.+|..|+
T Consensus 499 p~lr~~D~AldWv~l~~g~alyrqgD~Sd~iyvVl~GRlRsv~~~~~~k~~i~~EygrGd~iG~~E~lt---~~~R~tTv 575 (1158)
T KOG2968|consen 499 PFLRKLDFALDWVRLEPGQALYRQGDSSDSIYVVLNGRLRSVIRQSGGKKEIVGEYGRGDLIGEVEMLT---KQPRATTV 575 (1158)
T ss_pred HHHhhhhhhcceEEeccccHHHhcCCccCcEEEEecCeehhhhhccCccchhhhhccCcceeehhHHhh---cCCccceE
Confidence 355666677899999999999999999999999999999987 2345889999999999999999 89999999
Q ss_pred EecceEEEEEEeHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
Q psy9025 205 RSHGFSNLFVLNKDDLNEAIEYYPNAQEVLKKKARQLIKEN 245 (361)
Q Consensus 205 ~A~~~~~~~~l~~~~f~~ll~~~p~~~~~~~~~~~~~l~~~ 245 (361)
.|+-++++..||.-.|..+...||.+...+.+.+.++....
T Consensus 576 ~AvRdSelariPe~l~~~ik~ryP~v~~rl~~ll~~~~~g~ 616 (1158)
T KOG2968|consen 576 MAVRDSELARIPEGLLNFIKLRYPQVVTRLIKLLAEKILGS 616 (1158)
T ss_pred EEEeehhhhhccHHHHHHHHHhccHHHHHHHHHHHHHhhhh
Confidence 99999999999999999999999999888877777776443
No 25
>PF04831 Popeye: Popeye protein conserved region; InterPro: IPR006916 The Popeye (POP) family of proteins, is restricted to vertebrates and is preferentially expressed in developing and adult striated muscle. It is represented by a conserved region which includes three potential transmembrane domains []. The strong conservation of POP genes during evolution and their preferential expression in heart and skeletal muscle suggest that these novel proteins may have an important function in these tissues in vertebrates.; GO: 0016020 membrane
Probab=98.41 E-value=2.7e-05 Score=62.59 Aligned_cols=118 Identities=10% Similarity=0.106 Sum_probs=101.1
Q ss_pred CCHHHHHHHHHh-cceEEeCCCCEEEeCCCC-CCeEEEEEeeEEEEEeCcEEEEEeCCCCeechhhhhcc--cCCCceee
Q psy9025 127 CDEALLRELVLK-LRPVLYLPGDYICRKGEV-GKEMYIVKTGQVQVVSGETVLATLTEGSVFGEISLLAL--AGTNRRTA 202 (361)
Q Consensus 127 l~~~~l~~l~~~-l~~~~~~~ge~I~~~G~~-~~~ly~I~~G~v~v~~~~~~~~~l~~Gd~fGe~~ll~~--~~~~~~~~ 202 (361)
.+......|+.+ .+.....+|+.-.-||.. .|.+-++++|++.+..++..+..+.|.++......... ..+.....
T Consensus 15 Vs~~~Fk~iv~~~~~i~~L~~~~~YAvE~~T~~drLSlLLsGr~~Vs~~g~fLH~I~p~qFlDSPEW~s~~~s~~~~FQV 94 (153)
T PF04831_consen 15 VSRQQFKKIVGCCCEIRTLKKGETYAVEGKTPIDRLSLLLSGRMRVSCDGRFLHYIYPYQFLDSPEWESLRPSEDDKFQV 94 (153)
T ss_pred CCHHHHHHHHhhhceEEEecCCceeeecCCcccceEeEEEcCcEEEEECCEeeEeecccccccChhhhccccCCCCeEEE
Confidence 588899999988 778999999999888865 49999999999999999999999999998877665542 23577899
Q ss_pred EEEecceEEEEEEeHHHHHHHHHHCHHHHHHHHHHHHHHHHH
Q psy9025 203 DVRSHGFSNLFVLNKDDLNEAIEYYPNAQEVLKKKARQLIKE 244 (361)
Q Consensus 203 ~v~A~~~~~~~~l~~~~f~~ll~~~p~~~~~~~~~~~~~l~~ 244 (361)
|++|.++|..+..+|+.+..++...|.++..+...+.+-+.+
T Consensus 95 TitA~~~Cryl~W~R~kL~~~l~~~~~L~~vF~~liGkDI~~ 136 (153)
T PF04831_consen 95 TITAEEDCRYLCWPREKLYLLLAKDPFLAAVFSNLIGKDIAE 136 (153)
T ss_pred EEEEcCCcEEEEEEHHHHHHHHhhCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999988887776655443
No 26
>KOG2968|consensus
Probab=98.13 E-value=2.1e-05 Score=79.03 Aligned_cols=118 Identities=19% Similarity=0.307 Sum_probs=95.7
Q ss_pred cCcccccCCHHHHHHHHHhcceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEE-----eCcEEEEEeCCCCeech-hhhhc
Q psy9025 120 KVQLFQDCDEALLRELVLKLRPVLYLPGDYICRKGEVGKEMYIVKTGQVQVV-----SGETVLATLTEGSVFGE-ISLLA 193 (361)
Q Consensus 120 ~~~~f~~l~~~~l~~l~~~l~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~-----~~~~~~~~l~~Gd~fGe-~~ll~ 193 (361)
.-|.|-.|. .+++...+..|++|++.|++.+.+|.+.+|.++++ |++..+..+.+|+.|-. .+++.
T Consensus 104 EkP~fl~L~--------rh~~t~~l~~Gd~i~~~~~~dd~i~vv~sg~l~v~~~~~~g~~~llk~V~~G~~~tSllSiLd 175 (1158)
T KOG2968|consen 104 EKPVFLELD--------RHIETLSLDAGDYIFKPGESDDSIYVVISGELTVHIRNGDGKEYLLKTVPPGGSFTSLLSILD 175 (1158)
T ss_pred ccceeeeec--------hhhhhhcccCCceeccCCCCCceEEEEeccceEEEecCCCCceeeEeeccCCCchHhHHHHHH
Confidence 555555444 78889999999999999999999999999999998 56688999999976644 33332
Q ss_pred ccCC---CceeeEEEecceEEEEEEeHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
Q psy9025 194 LAGT---NRRTADVRSHGFSNLFVLNKDDLNEAIEYYPNAQEVLKKKARQLIKEN 245 (361)
Q Consensus 194 ~~~~---~~~~~~v~A~~~~~~~~l~~~~f~~ll~~~p~~~~~~~~~~~~~l~~~ 245 (361)
...+ ..+...++|.++|.+..+|...|..+...||+-...+.+.+..|+++.
T Consensus 176 ~l~~~ps~~~~i~akA~t~~tv~~~p~~sF~~~~~k~P~s~iriiQvvmTRLq~v 230 (1158)
T KOG2968|consen 176 SLPGFPSLSRTIAAKAATDCTVARIPYTSFRESFHKNPESSIRIIQVVMTRLQRV 230 (1158)
T ss_pred hccCCCcccceeeeeeecCceEEEeccchhhhhhccChHHHHHHHHHHHHHHHHh
Confidence 1113 346778999999999999999999999999999888888888777753
No 27
>PRK11832 putative DNA-binding transcriptional regulator; Provisional
Probab=98.08 E-value=0.00018 Score=61.74 Aligned_cols=108 Identities=9% Similarity=-0.017 Sum_probs=82.6
Q ss_pred HHHHHHhcceEEeCCCCEE-EeCCCCCCeEEEEEeeEEEEE-eCcEEEEEeCCCCeechhhhhcccCCCceeeEEEecce
Q psy9025 132 LRELVLKLRPVLYLPGDYI-CRKGEVGKEMYIVKTGQVQVV-SGETVLATLTEGSVFGEISLLALAGTNRRTADVRSHGF 209 (361)
Q Consensus 132 l~~l~~~l~~~~~~~ge~I-~~~G~~~~~ly~I~~G~v~v~-~~~~~~~~l~~Gd~fGe~~ll~~~~~~~~~~~v~A~~~ 209 (361)
...|....++..+++|..+ +......+.+|+|.+|.|.+. +++..+....+..+||-...+. .....+..+|.++
T Consensus 15 ~~~L~~~g~~~~~~~~~~~i~~~~~~~~~~~ll~~G~vsirr~d~ll~~t~~aP~IlGl~~~~~---~~~~~~~l~ae~~ 91 (207)
T PRK11832 15 DKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREENVLIGITQAPYIMGLADGLM---KNDIPYKLISEGN 91 (207)
T ss_pred HHHhhccCCeEecCCCcEEeccccCCCceEEEEEeceEEEEecCCeEEEeccCCeEeecccccC---CCCceEEEEEcCc
Confidence 3455666788999999997 544444477999999999997 3447778888999999988776 4555688999999
Q ss_pred EEEEEEeHHHHHHHHHHCHHHHHHHHHHHHHHHH
Q psy9025 210 SNLFVLNKDDLNEAIEYYPNAQEVLKKKARQLIK 243 (361)
Q Consensus 210 ~~~~~l~~~~f~~ll~~~p~~~~~~~~~~~~~l~ 243 (361)
|+.+.+|.++|.++++++.-+ +.+.....-.+.
T Consensus 92 c~~~~i~~~~~~~iie~~~LW-~~~~~~l~~~~~ 124 (207)
T PRK11832 92 CTGYHLPAKQTITLIEQNQLW-RDAFYWLAWQNR 124 (207)
T ss_pred cEEEEeeHHHHHHHHHHhchH-HHHHHHHHHHHH
Confidence 999999999999999987643 333333333333
No 28
>KOG0592|consensus
Probab=97.83 E-value=1.6e-06 Score=82.84 Aligned_cols=81 Identities=7% Similarity=0.059 Sum_probs=68.2
Q ss_pred CCcchhHH-HhhcccCcccchhhhccCcccccCc-ccc----cccccccccccCchhhhh-------hhccCCCC-CCCC
Q psy9025 276 APKLLPIV-MQVVPQNSMASKLLRCGSKSLNKRP-HRR----VNRSASADTYFHPKQQRR-------LLHQTPTG-HNNS 341 (361)
Q Consensus 276 ~~~~l~~~-~~~i~~~~~~~~vl~~~ek~i~~~~-~~~----~~~t~~d~~~~~~l~~~~-------~~~~~~~~-~~~~ 341 (361)
...++|-+ |++|.......-| ..||+.|..+ .+| |+-||+|+.-+|++++.+ +++ ..| |+|.
T Consensus 99 keYAiKVl~K~~Iike~KvkYV--~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYFvLe~A~nGdll~~i~--K~Gsfde~ 174 (604)
T KOG0592|consen 99 KEYAIKVLDKRYIIKEKKVKYV--TREKEALTQLSGHPGIVKLYFTFQDEESLYFVLEYAPNGDLLDLIK--KYGSFDET 174 (604)
T ss_pred ceeeHhhhhHHHHHhhcccchh--hHHHHHHHHhhCCCCeEEEEEEeecccceEEEEEecCCCcHHHHHH--HhCcchHH
Confidence 46678888 9999998888888 8899999997 566 788999999999999887 344 234 8887
Q ss_pred c----cceeehhhhhhhhccccC
Q psy9025 342 F----ECQVTVHREDIHESHITS 360 (361)
Q Consensus 342 ~----~a~v~~a~~~lH~~~i~~ 360 (361)
+ ||.++-|+||||++|||-
T Consensus 175 caR~YAAeIldAleylH~~GIIH 197 (604)
T KOG0592|consen 175 CARFYAAEILDALEYLHSNGIIH 197 (604)
T ss_pred HHHHHHHHHHHHHHHHHhcCcee
Confidence 4 999999999999999983
No 29
>KOG0605|consensus
Probab=97.64 E-value=2.5e-05 Score=74.85 Aligned_cols=98 Identities=10% Similarity=0.070 Sum_probs=81.3
Q ss_pred ccccccccccCCCCCCC-----------CCcchhHH-HhhcccCcccchhhhccCcccccCcccc----ccccccccccc
Q psy9025 259 MDASSVLLDRKGEEPKQ-----------APKLLPIV-MQVVPQNSMASKLLRCGSKSLNKRPHRR----VNRSASADTYF 322 (361)
Q Consensus 259 ~~~~l~~~~~~~~~~~~-----------~~~~l~~~-~~~i~~~~~~~~vl~~~ek~i~~~~~~~----~~~t~~d~~~~ 322 (361)
.+.|+.+....|+++.+ ...++|.+ |..|.+.++..|| +.||+||...+++ ++-+|+|..|+
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV--~aERdiL~~~ds~~vVKLyYsFQD~~~L 216 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHV--RAERDILAEVDSPWVVKLYYSFQDKEYL 216 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHH--HHHHHHhhhcCCCcEEEEEEEecCCCee
Confidence 45677788888876644 35577888 8899999999999 9999999998888 78899999999
Q ss_pred Cchhhhh--------hhccCCCCCCCCc----cceeehhhhhhhhccccC
Q psy9025 323 HPKQQRR--------LLHQTPTGHNNSF----ECQVTVHREDIHESHITS 360 (361)
Q Consensus 323 ~~l~~~~--------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~~ 360 (361)
|..||.. +++... +.|.+ .|-.|.|++.||+.|+|-
T Consensus 217 YLiMEylPGGD~mTLL~~~~~--L~e~~arfYiaE~vlAI~~iH~~gyIH 264 (550)
T KOG0605|consen 217 YLIMEYLPGGDMMTLLMRKDT--LTEDWARFYIAETVLAIESIHQLGYIH 264 (550)
T ss_pred EEEEEecCCccHHHHHHhcCc--CchHHHHHHHHHHHHHHHHHHHcCccc
Confidence 9998755 566555 77774 999999999999999973
No 30
>KOG0598|consensus
Probab=97.62 E-value=6.6e-06 Score=75.29 Aligned_cols=96 Identities=6% Similarity=0.042 Sum_probs=76.0
Q ss_pred cccccccccCCCCCC-----------CCCcchhHH-HhhcccCcccchhhhccCcccccCcccc----cccccccccccC
Q psy9025 260 DASSVLLDRKGEEPK-----------QAPKLLPIV-MQVVPQNSMASKLLRCGSKSLNKRPHRR----VNRSASADTYFH 323 (361)
Q Consensus 260 ~~~l~~~~~~~~~~~-----------~~~~~l~~~-~~~i~~~~~~~~vl~~~ek~i~~~~~~~----~~~t~~d~~~~~ 323 (361)
..++.+..+.|.++. +...++|.+ |++|++.+...|+ ..|++|+...++| +.-.|++...+|
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~--~~Er~IL~~v~hPFiv~l~ysFQt~~kLy 101 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHT--KAERNILSKIKHPFIVKLIYSFQTEEKLY 101 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHH--HHHHHHHHhCCCCcEeeeEEecccCCeEE
Confidence 445556666555442 236688888 8999999889999 9999999999999 455999999999
Q ss_pred chhhhh--------hhccCCCCCCCC----ccceeehhhhhhhhcccc
Q psy9025 324 PKQQRR--------LLHQTPTGHNNS----FECQVTVHREDIHESHIT 359 (361)
Q Consensus 324 ~l~~~~--------~~~~~~~~~~~~----~~a~v~~a~~~lH~~~i~ 359 (361)
++++.. +-+.+. ++|+ |.|=+++|++|||++|||
T Consensus 102 lVld~~~GGeLf~hL~~eg~--F~E~~arfYlaEi~lAL~~LH~~gIi 147 (357)
T KOG0598|consen 102 LVLDYLNGGELFYHLQREGR--FSEDRARFYLAEIVLALGYLHSKGII 147 (357)
T ss_pred EEEeccCCccHHHHHHhcCC--cchhHHHHHHHHHHHHHHHHHhCCee
Confidence 998766 344334 7776 499999999999999997
No 31
>KOG0610|consensus
Probab=97.25 E-value=2.4e-05 Score=72.72 Aligned_cols=82 Identities=12% Similarity=0.118 Sum_probs=67.4
Q ss_pred CCcchhHH-HhhcccCcccchhhhccCcccccCcccc----cccccccccccCchhhhh-------hhccCCCC-CCCC-
Q psy9025 276 APKLLPIV-MQVVPQNSMASKLLRCGSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQTPTG-HNNS- 341 (361)
Q Consensus 276 ~~~~l~~~-~~~i~~~~~~~~vl~~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~~~~~-~~~~- 341 (361)
..+++|-+ +..+.+.....++ ..|+.|+..+++| ||-.|..++|.+..|+.| +.++.|.. +.|+
T Consensus 103 ~~fAmKVmdK~~l~~rkKl~Ra--~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~meyCpGGdL~~LrqkQp~~~fse~~ 180 (459)
T KOG0610|consen 103 CLFAMKVMDKESLASRKKLKRA--QTEREILSLLDHPFLPTLYASFETDKYSCLVMEYCPGGDLHSLRQKQPGKRFSESA 180 (459)
T ss_pred ceEEEEEecHHHHhhhhHHHHH--HHHHHHHHhcCCCccchhhheeeccceeEEEEecCCCccHHHHHhhCCCCccchhh
Confidence 47778877 8888887777777 8899999999999 666899999999999999 34434422 6665
Q ss_pred ---ccceeehhhhhhhhcccc
Q psy9025 342 ---FECQVTVHREDIHESHIT 359 (361)
Q Consensus 342 ---~~a~v~~a~~~lH~~~i~ 359 (361)
|||=|+.|+||||-.|||
T Consensus 181 aRFYaAEvl~ALEYLHmlGiv 201 (459)
T KOG0610|consen 181 ARFYAAEVLLALEYLHMLGIV 201 (459)
T ss_pred HHHHHHHHHHHHHHHHhhcee
Confidence 499999999999999997
No 32
>KOG3542|consensus
Probab=97.25 E-value=0.00067 Score=66.50 Aligned_cols=119 Identities=18% Similarity=0.235 Sum_probs=94.5
Q ss_pred HHHHHHHHHHHHhccCcccccCCHHHHHHHHHhcceEEe-CCCCEEEeCCCCCCeEEEEEeeEEEEEeCcEEEEEeCCCC
Q psy9025 106 KTDVAINVHIQTLSKVQLFQDCDEALLRELVLKLRPVLY-LPGDYICRKGEVGKEMYIVKTGQVQVVSGETVLATLTEGS 184 (361)
Q Consensus 106 r~~i~~~~~~~~l~~~~~f~~l~~~~l~~l~~~l~~~~~-~~ge~I~~~G~~~~~ly~I~~G~v~v~~~~~~~~~l~~Gd 184 (361)
|.+-.++...+|+.+.|-|.+++-...++|+..|..... .+|.+|+..|+..+..|+|+.|.|++...+.....+.-|+
T Consensus 271 rtddDieqLLeFMhqlpAFAnmtMSvrReLC~vMvFaVVe~AGtivL~dgeeLDSWsVIlNG~VEv~~PdGk~e~l~mGn 350 (1283)
T KOG3542|consen 271 RTDDDIEQLLEFMHQLPAFANMTMSVRRELCLVMVFAVVEDAGTIVLADGEELDSWSVILNGCVEVVKPDGKREELKMGN 350 (1283)
T ss_pred cchHHHHHHHHHHHhchHhhcccHHHHHHHHHHHHHHHHhhcCeEEecCCcccceeEEEecceEEEecCCCceEEeeccc
Confidence 444456778899999999999999999999998775444 6799999999999999999999999997666667788899
Q ss_pred eechhhhhcccCCCceeeEEE-ecceEEEEEEeHHHHHHHHHHC
Q psy9025 185 VFGEISLLALAGTNRRTADVR-SHGFSNLFVLNKDDLNEAIEYY 227 (361)
Q Consensus 185 ~fGe~~ll~~~~~~~~~~~v~-A~~~~~~~~l~~~~f~~ll~~~ 227 (361)
.||...-.. .....-.++ -+.||+..+|..++|-.++..-
T Consensus 351 SFG~~PT~d---kqym~G~mRTkVDDCqFVciaqqDycrIln~v 391 (1283)
T KOG3542|consen 351 SFGAEPTPD---KQYMIGEMRTKVDDCQFVCIAQQDYCRILNTV 391 (1283)
T ss_pred ccCCCCCcc---hhhhhhhhheecccceEEEeehhhHHHHHHHH
Confidence 999865543 222222222 3578999999999998887643
No 33
>KOG0694|consensus
Probab=96.88 E-value=5.7e-05 Score=74.43 Aligned_cols=96 Identities=11% Similarity=0.061 Sum_probs=68.2
Q ss_pred cccccccccCCCCCCC-----------CCcchhHH-HhhcccCcccchhhhccCcccccCcc-cc----ccccccccccc
Q psy9025 260 DASSVLLDRKGEEPKQ-----------APKLLPIV-MQVVPQNSMASKLLRCGSKSLNKRPH-RR----VNRSASADTYF 322 (361)
Q Consensus 260 ~~~l~~~~~~~~~~~~-----------~~~~l~~~-~~~i~~~~~~~~vl~~~ek~i~~~~~-~~----~~~t~~d~~~~ 322 (361)
+.++.+..++|++..+ ...++|.+ |..|.+...-+.. ..||+|..-.. +| ++.+|+-...+
T Consensus 367 l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~--~~EkrI~~la~~HPFL~~L~~~fQT~~~l 444 (694)
T KOG0694|consen 367 LDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESL--MCEKRIFELANRHPFLVNLFSCFQTKEHL 444 (694)
T ss_pred ccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHH--HHHHHHHHHhccCCeEeecccccccCCeE
Confidence 3456666666665433 25567777 5566665544444 57888887744 66 67799999999
Q ss_pred Cchhhhh-------hhccCCCCCCCC----ccceeehhhhhhhhcccc
Q psy9025 323 HPKQQRR-------LLHQTPTGHNNS----FECQVTVHREDIHESHIT 359 (361)
Q Consensus 323 ~~l~~~~-------~~~~~~~~~~~~----~~a~v~~a~~~lH~~~i~ 359 (361)
|+.|+.+ +.+... ++|. |||||+.|+.|||++|||
T Consensus 445 ~fvmey~~Ggdm~~~~~~~~--F~e~rarfyaAev~l~L~fLH~~~II 490 (694)
T KOG0694|consen 445 FFVMEYVAGGDLMHHIHTDV--FSEPRARFYAAEVVLGLQFLHENGII 490 (694)
T ss_pred EEEEEecCCCcEEEEEeccc--ccHHHHHHHHHHHHHHHHHHHhcCce
Confidence 9999988 223122 6666 499999999999999997
No 34
>KOG0575|consensus
Probab=96.39 E-value=0.00028 Score=68.69 Aligned_cols=82 Identities=9% Similarity=0.014 Sum_probs=68.3
Q ss_pred CCcchhHH-HhhcccCcccchhhhccCcccccCcccc----cccccccccccCchhhhh------hhccCCCCCCCC---
Q psy9025 276 APKLLPIV-MQVVPQNSMASKLLRCGSKSLNKRPHRR----VNRSASADTYFHPKQQRR------LLHQTPTGHNNS--- 341 (361)
Q Consensus 276 ~~~~l~~~-~~~i~~~~~~~~vl~~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~------~~~~~~~~~~~~--- 341 (361)
...+.|-+ ++.|...++.+.+ .+|-.|...+.++ ++.-|.|+.++|+.+|-| -+.+..+-++|.
T Consensus 44 e~~A~KvVpk~~l~k~~~reKv--~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivLELC~~~sL~el~Krrk~ltEpEar 121 (592)
T KOG0575|consen 44 EVVAVKVVPKKLLKKPKQREKV--LNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVLELCHRGSLMELLKRRKPLTEPEAR 121 (592)
T ss_pred cEEEEEEeehHHhcCcchHHHH--HHHHHHHHhcCCCcEEeeeeEeecCCceEEEEEecCCccHHHHHHhcCCCCcHHHH
Confidence 35567777 8888889999999 8998898888888 678999999999999999 244333448888
Q ss_pred -ccceeehhhhhhhhcccc
Q psy9025 342 -FECQVTVHREDIHESHIT 359 (361)
Q Consensus 342 -~~a~v~~a~~~lH~~~i~ 359 (361)
|.-++|.++-|||+.|||
T Consensus 122 y~l~QIv~GlkYLH~~~Ii 140 (592)
T KOG0575|consen 122 YFLRQIVEGLKYLHSLGII 140 (592)
T ss_pred HHHHHHHHHHHHHHhcCce
Confidence 388999999999999997
No 35
>KOG3542|consensus
Probab=96.03 E-value=0.0093 Score=58.78 Aligned_cols=106 Identities=22% Similarity=0.232 Sum_probs=84.3
Q ss_pred CCHhHHHHHHHHHHHHHhccCcccccCCHHHHHHHHHhcceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEEeCcEEEEEe
Q psy9025 101 LPLKLKTDVAINVHIQTLSKVQLFQDCDEALLRELVLKLRPVLYLPGDYICRKGEVGKEMYIVKTGQVQVVSGETVLATL 180 (361)
Q Consensus 101 lp~~Lr~~i~~~~~~~~l~~~~~f~~l~~~~l~~l~~~l~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~~~~~~~~l 180 (361)
-|+.++........-..|++...|++|-...+..++.......++...++|+.|+.+...||+++|.|-+.+. .+
T Consensus 22 k~~~~~t~~~~rN~~~~lh~ld~~snl~~~~lk~l~~~aryer~~g~~ilf~~~~var~wyillsgsv~v~gq-----i~ 96 (1283)
T KOG3542|consen 22 KPPHLRTPDDIRNVYEQLHQLDTFSNLFIGPLKALCKTARYERHPGQYILFRDGDVARSWYILLSGSVFVEGQ-----IY 96 (1283)
T ss_pred CCcccCChhhhhhHHHHHhhhhhhhhhhhhhHHHhhhhhhhhcCCCceEEecccchhhheeeeeccceEeecc-----ee
Confidence 4555555544444445788899999999999999999999999999999999999999999999999988653 33
Q ss_pred CCCCeechhhhhcccCCCceeeEEEecceEEEEEEeH
Q psy9025 181 TEGSVFGEISLLALAGTNRRTADVRSHGFSNLFVLNK 217 (361)
Q Consensus 181 ~~Gd~fGe~~ll~~~~~~~~~~~v~A~~~~~~~~l~~ 217 (361)
-|-.+||-.- +..|..++-.+++++..+++.
T Consensus 97 mp~~~fgkr~------g~~r~~nclllq~semivid~ 127 (1283)
T KOG3542|consen 97 MPYGCFGKRT------GQNRTHNCLLLQESEMIVIDY 127 (1283)
T ss_pred cCcccccccc------ccccccceeeecccceeeeec
Confidence 4555676643 666888888888998888853
No 36
>KOG0612|consensus
Probab=96.02 E-value=0.0015 Score=68.09 Aligned_cols=99 Identities=7% Similarity=0.052 Sum_probs=75.6
Q ss_pred cccccccccccCCCCCCCC-----------CcchhHH-HhhcccCcccchhhhccCcccccCcccc----cccccccccc
Q psy9025 258 TMDASSVLLDRKGEEPKQA-----------PKLLPIV-MQVVPQNSMASKLLRCGSKSLNKRPHRR----VNRSASADTY 321 (361)
Q Consensus 258 ~~~~~l~~~~~~~~~~~~~-----------~~~l~~~-~~~i~~~~~~~~vl~~~ek~i~~~~~~~----~~~t~~d~~~ 321 (361)
....|+.+....|++..+. .++.|.+ |=.|....-++-+ +.|||||-..+++ +.-+|+|..|
T Consensus 72 l~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F--~EERDimv~~ns~Wiv~LhyAFQD~~~ 149 (1317)
T KOG0612|consen 72 LKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACF--REERDIMVFGNSEWIVQLHYAFQDERY 149 (1317)
T ss_pred CCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHH--HHHhHHHHcCCcHHHHHHHHHhcCccc
Confidence 3456777788888776553 4456666 5566666667777 8999999998887 5669999999
Q ss_pred cCchhhhh-------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 322 FHPKQQRR-------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 322 ~~~l~~~~-------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
+|++|+.- +|++-+ .++|+| +|=+|+|++-||+-|-|
T Consensus 150 LYlVMdY~pGGDlltLlSk~~-~~pE~~ArFY~aEiVlAldslH~mgyV 197 (1317)
T KOG0612|consen 150 LYLVMDYMPGGDLLTLLSKFD-RLPEDWARFYTAEIVLALDSLHSMGYV 197 (1317)
T ss_pred eEEEEecccCchHHHHHhhcC-CChHHHHHHHHHHHHHHHHHHHhccce
Confidence 99999866 455222 277775 99999999999999976
No 37
>KOG0608|consensus
Probab=93.25 E-value=0.0074 Score=59.64 Aligned_cols=80 Identities=8% Similarity=0.023 Sum_probs=61.6
Q ss_pred cchhHH-HhhcccCcccchhhhccCcccccCcccc----cccccccccccCchhhhh--------hhccCC--CCCCCCc
Q psy9025 278 KLLPIV-MQVVPQNSMASKLLRCGSKSLNKRPHRR----VNRSASADTYFHPKQQRR--------LLHQTP--TGHNNSF 342 (361)
Q Consensus 278 ~~l~~~-~~~i~~~~~~~~vl~~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~--------~~~~~~--~~~~~~~ 342 (361)
.+.|.+ |+-+....|-.|| -.||||+...+.. ||-.|+|...+|+.|+.+ +.+.+. ..+.++|
T Consensus 657 YAmKTLrKaDVl~rnQvaHV--KAERDILAEADn~WVVrLyySFQDkdnLYFVMdYIPGGDmMSLLIrmgIFeE~LARFY 734 (1034)
T KOG0608|consen 657 YAMKTLRKADVLMRNQVAHV--KAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMGIFEEDLARFY 734 (1034)
T ss_pred HHHhhhHHHHHHhhhhhhhh--hhhhhhHhhcCCcceEEEEEEeccCCceEEEEeccCCccHHHHHHHhccCHHHHHHHH
Confidence 355667 6666677888999 9999999998877 677999999999998876 344222 0033346
Q ss_pred cceeehhhhhhhhcccc
Q psy9025 343 ECQVTVHREDIHESHIT 359 (361)
Q Consensus 343 ~a~v~~a~~~lH~~~i~ 359 (361)
.|-|+.|.|+.|+.|.|
T Consensus 735 IAEltcAiesVHkmGFI 751 (1034)
T KOG0608|consen 735 IAELTCAIESVHKMGFI 751 (1034)
T ss_pred HHHHHHHHHHHHhccce
Confidence 99999999999999976
No 38
>KOG0690|consensus
Probab=92.53 E-value=0.02 Score=52.27 Aligned_cols=80 Identities=8% Similarity=0.064 Sum_probs=52.1
Q ss_pred CCcchhHH-HhhcccCcccchhhhccCcccccCcccc----cccccccccccCchhhhh--------hhccCCCCCCCC-
Q psy9025 276 APKLLPIV-MQVVPQNSMASKLLRCGSKSLNKRPHRR----VNRSASADTYFHPKQQRR--------LLHQTPTGHNNS- 341 (361)
Q Consensus 276 ~~~~l~~~-~~~i~~~~~~~~vl~~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~--------~~~~~~~~~~~~- 341 (361)
...++|.+ |..|....--+|- ..|.+.++.+++| +--.|+-..-+-+.|+.. +.+. +.+.|+
T Consensus 194 k~YAiKIlkKeviiakdEVAHT--lTE~RVL~~~~HPFLt~LKYsFQt~drlCFVMeyanGGeLf~HLsre--r~FsE~R 269 (516)
T KOG0690|consen 194 KLYAIKILKKEVIIAKDEVAHT--LTENRVLQNCRHPFLTSLKYSFQTQDRLCFVMEYANGGELFFHLSRE--RVFSEDR 269 (516)
T ss_pred ceeehhhhhhhheeehHHhhhh--hhHHHHHHhccCcHHHHhhhhhccCceEEEEEEEccCceEeeehhhh--hcccchh
Confidence 45577777 4444545555666 7789999999999 333555554444444433 2221 224443
Q ss_pred ---ccceeehhhhhhhhcccc
Q psy9025 342 ---FECQVTVHREDIHESHIT 359 (361)
Q Consensus 342 ---~~a~v~~a~~~lH~~~i~ 359 (361)
|.|-+|.|+.|||+++|+
T Consensus 270 tRFYGaEIvsAL~YLHs~~iv 290 (516)
T KOG0690|consen 270 TRFYGAEIVSALGYLHSRNIV 290 (516)
T ss_pred hhhhhHHHHHHhhhhhhCCee
Confidence 699999999999999997
No 39
>KOG0615|consensus
Probab=92.22 E-value=0.018 Score=54.12 Aligned_cols=82 Identities=9% Similarity=-0.046 Sum_probs=54.2
Q ss_pred CcchhHH-HhhcccCc--ccchhhhccCcccccCcccc----cccccccccccCchhhhh--------hhccCCCCCCCC
Q psy9025 277 PKLLPIV-MQVVPQNS--MASKLLRCGSKSLNKRPHRR----VNRSASADTYFHPKQQRR--------LLHQTPTGHNNS 341 (361)
Q Consensus 277 ~~~l~~~-~~~i~~~~--~~~~vl~~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~--------~~~~~~~~~~~~ 341 (361)
..++|.+ ++++.... .....-...|-+||+.+++| +..-|-+..|.||.||.. +..+.. +.|+
T Consensus 199 ~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds~YmVlE~v~GGeLfd~vv~nk~--l~ed 276 (475)
T KOG0615|consen 199 QVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDSSYMVLEYVEGGELFDKVVANKY--LRED 276 (475)
T ss_pred EEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCceEEEEEEecCccHHHHHHhccc--cccc
Confidence 4566666 55555533 11222126889999999999 455666777778887766 222122 4555
Q ss_pred ----ccceeehhhhhhhhccccC
Q psy9025 342 ----FECQVTVHREDIHESHITS 360 (361)
Q Consensus 342 ----~~a~v~~a~~~lH~~~i~~ 360 (361)
+.=+++.|+-|||+.||+-
T Consensus 277 ~~K~~f~Qll~avkYLH~~GI~H 299 (475)
T KOG0615|consen 277 LGKLLFKQLLTAVKYLHSQGIIH 299 (475)
T ss_pred hhHHHHHHHHHHHHHHHHcCccc
Confidence 3778999999999999973
No 40
>KOG0695|consensus
Probab=91.51 E-value=0.035 Score=50.88 Aligned_cols=81 Identities=9% Similarity=0.100 Sum_probs=49.7
Q ss_pred CcchhHHHhhccc-CcccchhhhccCcccccC-cccc----cccccccccccCchhhhh----------hhccCCCCCCC
Q psy9025 277 PKLLPIVMQVVPQ-NSMASKLLRCGSKSLNKR-PHRR----VNRSASADTYFHPKQQRR----------LLHQTPTGHNN 340 (361)
Q Consensus 277 ~~~l~~~~~~i~~-~~~~~~vl~~~ek~i~~~-~~~~----~~~t~~d~~~~~~l~~~~----------~~~~~~~~~~~ 340 (361)
..++|-+|+.++. -....-| +.||....+ .+.| +..-|+-++-+.+..+.+ ..++-|.-+.+
T Consensus 277 iyamkvvkkel~nddedidwv--qtek~vfe~asn~pflvglhscfqtesrlffvieyv~ggdlmfhmqrqrklpeehar 354 (593)
T KOG0695|consen 277 IYAMKVVKKELVNDDEDIDWV--QTEKHVFEQASNNPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHAR 354 (593)
T ss_pred eeehhhHHHHhcCCcccchhH--HhhHHHHHhccCCCeEEehhhhhcccceEEEEEEEecCcceeeehhhhhcCcHHHhh
Confidence 4566777666654 3334444 677877777 5556 344555555444443333 12222222444
Q ss_pred Cccceeehhhhhhhhcccc
Q psy9025 341 SFECQVTVHREDIHESHIT 359 (361)
Q Consensus 341 ~~~a~v~~a~~~lH~~~i~ 359 (361)
+|.|-+..|+.|||++|||
T Consensus 355 fys~ei~lal~flh~rgii 373 (593)
T KOG0695|consen 355 FYSAEICLALNFLHERGII 373 (593)
T ss_pred hhhHHHHHHHHHHhhcCee
Confidence 5699999999999999998
No 41
>PF07883 Cupin_2: Cupin domain; InterPro: IPR013096 This family represents the conserved barrel domain of the cupin superfamily [] (cupa is the Latin term for a small barrel). ; PDB: 2OPK_C 3BU7_B 2PHD_D 3NVC_A 3NKT_A 3NJZ_A 3NW4_A 3NST_A 3NL1_A 2H0V_A ....
Probab=91.22 E-value=1.8 Score=29.85 Aligned_cols=67 Identities=16% Similarity=0.182 Sum_probs=44.5
Q ss_pred EEeCCCCEEEeCCCCCC-eEEEEEeeEEEEEeCcEEEEEeCCCCeechhhhhcccCCCceeeEEEecceEEEEEE
Q psy9025 142 VLYLPGDYICRKGEVGK-EMYIVKTGQVQVVSGETVLATLTEGSVFGEISLLALAGTNRRTADVRSHGFSNLFVL 215 (361)
Q Consensus 142 ~~~~~ge~I~~~G~~~~-~ly~I~~G~v~v~~~~~~~~~l~~Gd~fGe~~ll~~~~~~~~~~~v~A~~~~~~~~l 215 (361)
..++||+..-..-.+.. .+++|.+|.+.+.-++. ...+.+||.+=..+ +.+.......-+++.++.+
T Consensus 3 ~~~~pG~~~~~h~H~~~~e~~~vl~G~~~~~~~~~-~~~l~~Gd~~~i~~------~~~H~~~n~~~~~~~~l~V 70 (71)
T PF07883_consen 3 VTLPPGGSIPPHRHPGEDEFFYVLSGEGTLTVDGE-RVELKPGDAIYIPP------GVPHQVRNPGDEPARFLVV 70 (71)
T ss_dssp EEEETTEEEEEEEESSEEEEEEEEESEEEEEETTE-EEEEETTEEEEEET------TSEEEEEEESSSEEEEEEE
T ss_pred EEECCCCCCCCEECCCCCEEEEEEECCEEEEEccE-EeEccCCEEEEECC------CCeEEEEECCCCCEEEEEE
Confidence 46788887666555565 89999999999985444 67788988652221 4444444444555666554
No 42
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=90.50 E-value=0.015 Score=55.10 Aligned_cols=59 Identities=8% Similarity=0.050 Sum_probs=43.3
Q ss_pred ccCcccccCcccc----cccccccccccCchhhhh-------hh-ccCCCCCCCC----ccceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LL-HQTPTGHNNS----FECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~-~~~~~~~~~~----~~a~v~~a~~~lH~~~i~ 359 (361)
..|..++..++++ ++..+.+..++|++++.| .+ ++.+ +++. +++.++.|++|||++||+
T Consensus 49 ~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~--l~~~~~~~~~~qi~~aL~~lH~~giv 123 (363)
T cd05628 49 RAERDILVEADSLWVVKMFYSFQDKLNLYLIMEFLPGGDMMTLLMKKDT--LTEEETQFYIAETVLAIDSIHQLGFI 123 (363)
T ss_pred HHHHHHHHhCCCCCcceEEEEEecCCeEEEEEcCCCCCcHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHhCCeE
Confidence 5677777777776 345778888888888877 22 2222 5554 288999999999999997
No 43
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=89.32 E-value=0.021 Score=54.53 Aligned_cols=78 Identities=9% Similarity=0.044 Sum_probs=51.5
Q ss_pred cchhHH-HhhcccCcccchhhhccCcccccCcccc----cccccccccccCchhhhh-------hh-ccCCCCCCCCc--
Q psy9025 278 KLLPIV-MQVVPQNSMASKLLRCGSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LL-HQTPTGHNNSF-- 342 (361)
Q Consensus 278 ~~l~~~-~~~i~~~~~~~~vl~~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~-~~~~~~~~~~~-- 342 (361)
.++|.+ +..+....+..++ ..|..++..++++ ++..+.+..++|+.++.| .+ +... ++|..
T Consensus 29 ~aiK~i~~~~~~~~~~~~~~--~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~--~~e~~~~ 104 (382)
T cd05625 29 YAMKTLRKKDVLLRNQVAHV--KAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMGI--FPEDLAR 104 (382)
T ss_pred EEEEEEeHHHhhhHHHHHHH--HHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEeCCCCCcHHHHHHhcCC--CCHHHHH
Confidence 344444 3333333344455 6778888887776 455788888888888876 22 2122 55542
Q ss_pred --cceeehhhhhhhhcccc
Q psy9025 343 --ECQVTVHREDIHESHIT 359 (361)
Q Consensus 343 --~a~v~~a~~~lH~~~i~ 359 (361)
.+.++.|++|||++||+
T Consensus 105 ~~~~qi~~al~~lH~~~iv 123 (382)
T cd05625 105 FYIAELTCAVESVHKMGFI 123 (382)
T ss_pred HHHHHHHHHHHHHHhCCee
Confidence 78899999999999997
No 44
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=88.12 E-value=0.032 Score=52.72 Aligned_cols=78 Identities=8% Similarity=0.080 Sum_probs=51.2
Q ss_pred cchhHH-HhhcccCcccchhhhccCcccccCcccc----cccccccccccCchhhhh-------hh-ccCCCCCCCCc--
Q psy9025 278 KLLPIV-MQVVPQNSMASKLLRCGSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LL-HQTPTGHNNSF-- 342 (361)
Q Consensus 278 ~~l~~~-~~~i~~~~~~~~vl~~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~-~~~~~~~~~~~-- 342 (361)
.++|.+ +..+.......++ ..|..++..++++ ++..+.+..++|++++.| .+ ++.. +.|..
T Consensus 29 vaiK~~~~~~~~~~~~~~~~--~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~--l~~~~~~ 104 (364)
T cd05599 29 YAMKKLRKSEMLEKEQVAHV--RAERDILAEADNPWVVKLYYSFQDENYLYLIMEYLPGGDMMTLLMKKDT--FTEEETR 104 (364)
T ss_pred EEEEEEEHHHhhhhhHHHHH--HHHHHHHHhCCCCCCcceEEEEEcCCeEEEEECCCCCcHHHHHHHHcCC--CCHHHHH
Confidence 344444 2333333333444 5678888887777 445778888888888876 22 2222 55552
Q ss_pred --cceeehhhhhhhhcccc
Q psy9025 343 --ECQVTVHREDIHESHIT 359 (361)
Q Consensus 343 --~a~v~~a~~~lH~~~i~ 359 (361)
.+.++.|++|||++||+
T Consensus 105 ~~~~qi~~aL~~lH~~~iv 123 (364)
T cd05599 105 FYIAETILAIDSIHKLGYI 123 (364)
T ss_pred HHHHHHHHHHHHHHHCCeE
Confidence 78999999999999986
No 45
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=87.67 E-value=0.034 Score=52.57 Aligned_cols=59 Identities=8% Similarity=0.058 Sum_probs=43.2
Q ss_pred ccCcccccCcccc----cccccccccccCchhhhh-------hh-ccCCCCCCCC----ccceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LL-HQTPTGHNNS----FECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~-~~~~~~~~~~----~~a~v~~a~~~lH~~~i~ 359 (361)
..|..++..++++ ++..+.+..++|++++.| .+ +... +++. ++++++.|++|||++||+
T Consensus 49 ~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~--l~~~~~~~~~~qi~~~L~~lH~~giv 123 (360)
T cd05627 49 RAERDILVEADGAWVVKMFYSFQDKRNLYLIMEFLPGGDMMTLLMKKDT--LSEEATQFYIAETVLAIDAIHQLGFI 123 (360)
T ss_pred HHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeCCCCccHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCeE
Confidence 5677777777766 445778888888888877 22 2222 5555 388999999999999996
No 46
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=87.58 E-value=0.036 Score=52.90 Aligned_cols=78 Identities=9% Similarity=0.061 Sum_probs=50.7
Q ss_pred cchhHH-HhhcccCcccchhhhccCcccccCcccc----cccccccccccCchhhhh-------hh-ccCCCCCCCCc--
Q psy9025 278 KLLPIV-MQVVPQNSMASKLLRCGSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LL-HQTPTGHNNSF-- 342 (361)
Q Consensus 278 ~~l~~~-~~~i~~~~~~~~vl~~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~-~~~~~~~~~~~-- 342 (361)
.++|.+ +..+.......++ ..|..++..++++ ++..+.+..++|+.++.| ++ +... ++|..
T Consensus 29 ~aiK~i~~~~~~~~~~~~~~--~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~--~~e~~~~ 104 (381)
T cd05626 29 YAMKTLRKKDVLNRNQVAHV--KAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMEV--FPEVLAR 104 (381)
T ss_pred EEEEEEEHHHhhhhHHHHHH--HHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEecCCCCcHHHHHHhcCC--CCHHHHH
Confidence 344444 3333333333445 5677788777776 445777888888888876 22 2222 55553
Q ss_pred --cceeehhhhhhhhcccc
Q psy9025 343 --ECQVTVHREDIHESHIT 359 (361)
Q Consensus 343 --~a~v~~a~~~lH~~~i~ 359 (361)
++.++.|++|||++||+
T Consensus 105 ~~~~qi~~aL~~LH~~giv 123 (381)
T cd05626 105 FYIAELTLAIESVHKMGFI 123 (381)
T ss_pred HHHHHHHHHHHHHHhCCee
Confidence 78999999999999996
No 47
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=87.34 E-value=0.034 Score=52.91 Aligned_cols=59 Identities=8% Similarity=0.107 Sum_probs=43.0
Q ss_pred ccCcccccCcccc----cccccccccccCchhhhh-------hh-ccCCCCCCCC----ccceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LL-HQTPTGHNNS----FECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~-~~~~~~~~~~----~~a~v~~a~~~lH~~~i~ 359 (361)
..|..++..++++ ++..+.+..++|+.++.| .+ +... +++. +++.++.|++|||++||+
T Consensus 49 ~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~--~~~~~~~~~~~ql~~aL~~LH~~giv 123 (377)
T cd05629 49 KAERDVLAESDSPWVVSLYYSFQDAQYLYLIMEFLPGGDLMTMLIKYDT--FSEDVTRFYMAECVLAIEAVHKLGFI 123 (377)
T ss_pred HHHHHHHHhCCCCCcceEEEEEEcCCeeEEEEeCCCCCcHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 5677777777777 445778888899898877 12 2122 4444 278899999999999996
No 48
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=87.28 E-value=0.039 Score=52.56 Aligned_cols=59 Identities=10% Similarity=0.129 Sum_probs=44.2
Q ss_pred ccCcccccCcccc----cccccccccccCchhhhh-------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
..|..++..++++ +...+.+..++|+.++.| ++.+.. +++.. +++++.|++|||++||+
T Consensus 91 ~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~~--~~~~~~~~~~~qil~aL~~LH~~~Iv 164 (370)
T cd05621 91 WEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYD--VPEKWAKFYTAEVVLALDAIHSMGLI 164 (370)
T ss_pred HHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEcCCCCCcHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHHCCeE
Confidence 5677788777777 445778888899898877 244223 55553 78999999999999986
No 49
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=86.84 E-value=0.045 Score=52.05 Aligned_cols=59 Identities=10% Similarity=0.173 Sum_probs=43.4
Q ss_pred ccCcccccCcccc----cccccccccccCchhhhh-------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
..|..++..++++ +...+.+..++|+.++.| ++++.. +++.. +++++.|++|||++||+
T Consensus 91 ~~e~~il~~~~h~~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~~--l~~~~~~~~~~qi~~aL~~LH~~~iv 164 (370)
T cd05596 91 WEERDIMAHANSEWIVQLHYAFQDDKYLYMVMEYMPGGDLVNLMSNYD--IPEKWARFYTAEVVLALDAIHSMGFI 164 (370)
T ss_pred HHHHHHHHhCCCCCcceEEEEEecCCEEEEEEcCCCCCcHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 4567777777777 344777888888888876 344333 55554 78999999999999986
No 50
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=86.77 E-value=0.038 Score=52.63 Aligned_cols=59 Identities=10% Similarity=0.119 Sum_probs=43.5
Q ss_pred ccCcccccCcccc----cccccccccccCchhhhh-------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
..|..++..++++ +...+.+..++|+.++.| ++.+.. +++.. ++.++.|++|||++||+
T Consensus 91 ~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~~~~~~--~~~~~~~~~~~qi~~aL~~LH~~~iv 164 (371)
T cd05622 91 WEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD--VPEKWARFYTAEVVLALDAIHSMGFI 164 (371)
T ss_pred HHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEcCCCCCcHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHHCCEE
Confidence 5677777777777 445777888888888866 233222 55553 78999999999999986
No 51
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=84.73 E-value=0.065 Score=50.94 Aligned_cols=60 Identities=10% Similarity=0.036 Sum_probs=42.7
Q ss_pred ccCcccccCcccc----cccccccccccCchhhhh-------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
..|..++.++.++ ++..+.+..++|+.++.| ++.+ ...+++.. .+.++.|++|||++||+
T Consensus 49 ~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~i~~-~~~~~~~~~~~~~~qi~~al~~lH~~~iv 123 (376)
T cd05598 49 KAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIR-LGIFEEDLARFYIAELTCAIESVHKMGFI 123 (376)
T ss_pred HHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeE
Confidence 5677788777766 445777888888888876 2221 11255553 77899999999999986
No 52
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=83.64 E-value=0.074 Score=49.61 Aligned_cols=59 Identities=14% Similarity=0.037 Sum_probs=41.5
Q ss_pred ccCcccccCcccc----cccccccccccCchhhhh-------hh-ccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LL-HQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~-~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
..|..++..+.++ +...+.+..++|+.++.| .+ +... +++.. ...++.|+.|||++||+
T Consensus 66 ~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~qi~~aL~~LH~~~iv 140 (329)
T PTZ00263 66 AQEKSILMELSHPFIVNMMCSFQDENRVYFLLEFVVGGELFTHLRKAGR--FPNDVAKFYHAELVLAFEYLHSKDII 140 (329)
T ss_pred HHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEEcCCCCChHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 5677777777776 344677778888888766 12 2122 45542 67899999999999986
No 53
>KOG0585|consensus
Probab=83.06 E-value=0.18 Score=48.53 Aligned_cols=62 Identities=13% Similarity=0.058 Sum_probs=40.0
Q ss_pred ccCcccccCcccc-ccc-----ccccccccCchhhhhh----hccCC-CC-CCCC----ccceeehhhhhhhhccccC
Q psy9025 299 CGSKSLNKRPHRR-VNR-----SASADTYFHPKQQRRL----LHQTP-TG-HNNS----FECQVTVHREDIHESHITS 360 (361)
Q Consensus 299 ~~ek~i~~~~~~~-~~~-----t~~d~~~~~~l~~~~~----~~~~~-~~-~~~~----~~a~v~~a~~~lH~~~i~~ 360 (361)
+.|--||+.|+++ |-+ .-+.+.++||.++-|- .-.++ .- +.|. +---||.++||||..|||-
T Consensus 156 ~~EIailKkl~H~nVV~LiEvLDDP~s~~~YlVley~s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiH 233 (576)
T KOG0585|consen 156 RREIAILKKLHHPNVVKLIEVLDDPESDKLYLVLEYCSKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHYQGIIH 233 (576)
T ss_pred HHHHHHHHhcCCcCeeEEEEeecCcccCceEEEEEeccCCccccCCCCcccccHHHHHHHHHHHHHHHHHHHhcCeec
Confidence 5667788888887 322 3345567999999882 22111 11 2222 2456899999999999983
No 54
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=82.89 E-value=0.095 Score=49.10 Aligned_cols=60 Identities=7% Similarity=0.029 Sum_probs=42.5
Q ss_pred ccCcccccCcccc----cccccccccccCchhhhh-------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
..|..++..++++ ++..+.+..++++.++.| .+.+. ..+++.. ..+++.|++|||++||+
T Consensus 49 ~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~gii 123 (350)
T cd05573 49 RAERDILADADSPWIVKLYYSFQDEEHLYLVMEYMPGGDLMNLLIRK-DVFPEETARFYIAELVLALDSVHKLGFI 123 (350)
T ss_pred HHHHHHHHhcCCCCccchhhheecCCeEEEEEcCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 5677777777766 445778888888888766 22211 1255553 78999999999999986
No 55
>PRK13290 ectC L-ectoine synthase; Reviewed
Probab=82.51 E-value=7.9 Score=30.67 Aligned_cols=68 Identities=12% Similarity=0.075 Sum_probs=42.7
Q ss_pred ceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEE-eCcEEEEEeCCCCeechhhhhcccCCCceeeEEEecceEEEEEE
Q psy9025 140 RPVLYLPGDYICRKGEVGKEMYIVKTGQVQVV-SGETVLATLTEGSVFGEISLLALAGTNRRTADVRSHGFSNLFVL 215 (361)
Q Consensus 140 ~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~-~~~~~~~~l~~Gd~fGe~~ll~~~~~~~~~~~v~A~~~~~~~~l 215 (361)
....+.||..+-.--.....+++|++|.+.+. -.+.....+.+||.|-..+ +.+. .+.+.+++.++.+
T Consensus 38 ~~~~l~pG~~~~~h~h~~~E~~yVL~G~~~~~~i~~g~~~~L~aGD~i~~~~------~~~H--~~~N~e~~~~l~v 106 (125)
T PRK13290 38 HETTIYAGTETHLHYKNHLEAVYCIEGEGEVEDLATGEVHPIRPGTMYALDK------HDRH--YLRAGEDMRLVCV 106 (125)
T ss_pred EEEEECCCCcccceeCCCEEEEEEEeCEEEEEEcCCCEEEEeCCCeEEEECC------CCcE--EEEcCCCEEEEEE
Confidence 34577888755432222247999999999997 4323457899999875433 2333 3333477776665
No 56
>KOG0595|consensus
Probab=82.31 E-value=0.087 Score=49.53 Aligned_cols=80 Identities=10% Similarity=0.082 Sum_probs=54.0
Q ss_pred CcchhHH-HhhcccCcccchhhhccCcccccCcccc----cccccccccccCchhhhh-------hhccCCCCCCCC---
Q psy9025 277 PKLLPIV-MQVVPQNSMASKLLRCGSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQTPTGHNNS--- 341 (361)
Q Consensus 277 ~~~l~~~-~~~i~~~~~~~~vl~~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~~~~~~~~~--- 341 (361)
..++|++ ++.+....++ ....|-.|++.+.++ +..-+.+..++|+.||.| +++ ....++|+
T Consensus 37 ~VAIK~i~~~~l~~k~~e---~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVMEyC~gGDLs~yi~-~~~~l~e~t~r 112 (429)
T KOG0595|consen 37 EVAIKCIAKKKLNKKLVE---LLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVMEYCNGGDLSDYIR-RRGRLPEATAR 112 (429)
T ss_pred eEEeeeehhhccCHHHHH---HHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEEEeCCCCCHHHHHH-HcCCCCHHHHH
Confidence 4456666 4443322222 225677788888888 556778888999999999 333 11237777
Q ss_pred -ccceeehhhhhhhhccccC
Q psy9025 342 -FECQVTVHREDIHESHITS 360 (361)
Q Consensus 342 -~~a~v~~a~~~lH~~~i~~ 360 (361)
|--++.-|+++||++|||-
T Consensus 113 ~Fm~QLA~alq~L~~~~IiH 132 (429)
T KOG0595|consen 113 HFMQQLASALQFLHENNIIH 132 (429)
T ss_pred HHHHHHHHHHHHHHHCCeee
Confidence 3666777999999999973
No 57
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=82.11 E-value=0.08 Score=49.22 Aligned_cols=59 Identities=5% Similarity=0.019 Sum_probs=40.5
Q ss_pred ccCcccccCcccc----cccccccccccCchhhhh-------hh-ccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LL-HQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~-~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
..|..++..++++ +...+.+..++|+.++.| .+ .+.. +++.- +..++.|++|||++||+
T Consensus 43 ~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~qi~~~L~~lH~~~iv 117 (323)
T cd05571 43 LTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERV--FSEDRARFYGAEIVSALGYLHSCDVV 117 (323)
T ss_pred HHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCCcHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHhCCeE
Confidence 4566677776666 334677778888888766 12 2122 44442 78899999999999986
No 58
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=82.10 E-value=0.084 Score=48.21 Aligned_cols=59 Identities=14% Similarity=0.130 Sum_probs=41.5
Q ss_pred ccCcccccCcccc----cccccccccccCchhhhh-------hh-ccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LL-HQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~-~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
..|..+++.++++ +...+.+..++|+.++.| .+ +... +.+.. +..++.|+.|||++||+
T Consensus 49 ~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~qi~~~l~~lH~~~i~ 123 (291)
T cd05612 49 HNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLMEYVPGGELFSYLRNSGR--FSNSTGLFYASEIVCALEYLHSKEIV 123 (291)
T ss_pred HHHHHHHHhCCCCcHhhhHhhhccCCeEEEEEeCCCCCCHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 5667777777776 445777788888888765 12 2122 44442 78899999999999986
No 59
>KOG0580|consensus
Probab=80.65 E-value=0.43 Score=42.03 Aligned_cols=99 Identities=6% Similarity=-0.083 Sum_probs=70.8
Q ss_pred cccccccccCCCCCCCC-----------CcchhHH-HhhcccCcccchhhhccCcccccCcccc----cccccccccccC
Q psy9025 260 DASSVLLDRKGEEPKQA-----------PKLLPIV-MQVVPQNSMASKLLRCGSKSLNKRPHRR----VNRSASADTYFH 323 (361)
Q Consensus 260 ~~~l~~~~~~~~~~~~~-----------~~~l~~~-~~~i~~~~~~~~vl~~~ek~i~~~~~~~----~~~t~~d~~~~~ 323 (361)
+.|+.+..+.|.+..+. .-++|-+ |.+|...+.+.++ ..|-.|-.++++| +|.-|-|++=+|
T Consensus 21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~ql--rREiEIqs~L~hpnilrlY~~fhd~~riy 98 (281)
T KOG0580|consen 21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQL--RREIEIQSHLRHPNILRLYGYFHDSKRIY 98 (281)
T ss_pred hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhh--hheeEeecccCCccHHhhhhheeccceeE
Confidence 45666667777654443 2245555 7777777777777 6777777778888 777888998888
Q ss_pred chhhhh-------hhccCCCC-CCCCc----cceeehhhhhhhhccccC
Q psy9025 324 PKQQRR-------LLHQTPTG-HNNSF----ECQVTVHREDIHESHITS 360 (361)
Q Consensus 324 ~l~~~~-------~~~~~~~~-~~~~~----~a~v~~a~~~lH~~~i~~ 360 (361)
..+|.. .|...+.+ ++|.. ..++.-|+.|.|.++||-
T Consensus 99 LilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIh 147 (281)
T KOG0580|consen 99 LILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIH 147 (281)
T ss_pred EEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCccc
Confidence 887755 34433433 77774 788999999999999973
No 60
>PF05899 Cupin_3: Protein of unknown function (DUF861); InterPro: IPR008579 The function of the proteins in this entry are unknown. They contain the conserved barrel domain of the 'cupin' superfamily and members are specific to plants and bacteria.; PDB: 1RC6_A 3MYX_A 1O5U_A 2K9Z_A 1LKN_A 3ES4_A 1SFN_B 3BCW_A.
Probab=80.57 E-value=3.1 Score=29.50 Aligned_cols=42 Identities=21% Similarity=0.372 Sum_probs=30.4
Q ss_pred eCCCCEEEeCCCCCCeEEEEEeeEEEEEeCcEEEEEeCCCCeec
Q psy9025 144 YLPGDYICRKGEVGKEMYIVKTGQVQVVSGETVLATLTEGSVFG 187 (361)
Q Consensus 144 ~~~ge~I~~~G~~~~~ly~I~~G~v~v~~~~~~~~~l~~Gd~fG 187 (361)
..||..-..- ..+.+.+|++|.|.+...+.....+++||.|=
T Consensus 14 ~~pg~~~~~~--~~~E~~~vleG~v~it~~~G~~~~~~aGD~~~ 55 (74)
T PF05899_consen 14 CTPGKFPWPY--PEDEFFYVLEGEVTITDEDGETVTFKAGDAFF 55 (74)
T ss_dssp EECEEEEEEE--SSEEEEEEEEEEEEEEETTTEEEEEETTEEEE
T ss_pred ECCceeEeeC--CCCEEEEEEEeEEEEEECCCCEEEEcCCcEEE
Confidence 3455533332 22788999999999997665668899999873
No 61
>KOG0986|consensus
Probab=79.39 E-value=0.25 Score=47.37 Aligned_cols=82 Identities=7% Similarity=0.103 Sum_probs=52.9
Q ss_pred CCcchhHH-HhhcccCcccchhhhccCcccccCcccc--cccccc----ccccc-Cchhhhh-----hhccCCCCCCCC-
Q psy9025 276 APKLLPIV-MQVVPQNSMASKLLRCGSKSLNKRPHRR--VNRSAS----ADTYF-HPKQQRR-----LLHQTPTGHNNS- 341 (361)
Q Consensus 276 ~~~~l~~~-~~~i~~~~~~~~vl~~~ek~i~~~~~~~--~~~t~~----d~~~~-~~l~~~~-----~~~~~~~~~~~~- 341 (361)
...+.+.+ |+.|+..+-+.-. .+||.|+..+.++ |.-+|+ |.=++ --+|+-- +.+-+..||+|.
T Consensus 211 KMYAcKkL~KKRiKkr~ge~ma--LnEk~iL~kV~s~FiVslaYAfeTkd~LClVLtlMNGGDLkfHiyn~g~~gF~e~r 288 (591)
T KOG0986|consen 211 KMYACKKLDKKRIKKRKGETMA--LNEKQILEKVSSPFIVSLAYAFETKDALCLVLTLMNGGDLKFHIYNHGNPGFDEQR 288 (591)
T ss_pred hhHHHHHHHHHHHHHhhhhHHh--hHHHHHHHHhccCcEEEEeeeecCCCceEEEEEeecCCceeEEeeccCCCCCchHH
Confidence 35567777 8888876555555 8999999998888 322222 11111 1112111 233233568887
Q ss_pred ---ccceeehhhhhhhhcccc
Q psy9025 342 ---FECQVTVHREDIHESHIT 359 (361)
Q Consensus 342 ---~~a~v~~a~~~lH~~~i~ 359 (361)
|||-+..++++||+++||
T Consensus 289 a~FYAAEi~cGLehlH~~~iV 309 (591)
T KOG0986|consen 289 ARFYAAEIICGLEHLHRRRIV 309 (591)
T ss_pred HHHHHHHHHhhHHHHHhccee
Confidence 499999999999999997
No 62
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=78.76 E-value=0.15 Score=47.62 Aligned_cols=59 Identities=10% Similarity=0.078 Sum_probs=41.4
Q ss_pred ccCcccccCcccc----cccccccccccCchhhhh-------hhc-cCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLH-QTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~-~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
..|..++..++++ +...+.+..++|+.++.| ++. ... +.+.. ...++.|+.|||++||+
T Consensus 49 ~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~--l~~~~~~~~~~qi~~~l~~lH~~~iv 123 (333)
T cd05600 49 LTERDILTTTKSEWLVKLLYAFQDDEYLYLAMEYVPGGDFRTLLNNLGV--LSEDHARFYMAEMFEAVDALHELGYI 123 (333)
T ss_pred HHHHHHHHhCCCCCCccEEEEEEcCCEEEEEEeCCCCCCHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 5677777777666 344777788888888766 232 122 44442 78899999999999986
No 63
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=77.71 E-value=0.16 Score=46.82 Aligned_cols=59 Identities=8% Similarity=0.017 Sum_probs=39.3
Q ss_pred ccCcccccCcccc----cccccccccccCchhhhh-------hh-ccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LL-HQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~-~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
..|..++..++++ +...+.+..++|+.++.| .+ ++.. +++.. ...++.|++|||++||+
T Consensus 41 ~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~--~~~~~~~~~~~qi~~~l~~lH~~~i~ 115 (312)
T cd05585 41 LAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGELFHHLQREGR--FDLSRARFYTAELLCALENLHKFNVI 115 (312)
T ss_pred HHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHhCCeE
Confidence 3466666666666 334666777777777766 12 2222 44442 77899999999999986
No 64
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=76.65 E-value=0.18 Score=45.76 Aligned_cols=61 Identities=10% Similarity=0.130 Sum_probs=38.7
Q ss_pred ccCcccccCcccc----cccccccccccCchhhhh--------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRPHRR----VNRSASADTYFHPKQQRR--------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~--------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
..|..++..++++ +...+.+..+.++.++.| +.......+++.. +..++.|++|||++||+
T Consensus 48 ~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ii 124 (285)
T cd05631 48 LNEKRILEKVNSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIV 124 (285)
T ss_pred HHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEE
Confidence 4566677776665 334566666776666655 1111111244442 78899999999999986
No 65
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=76.61 E-value=0.17 Score=47.16 Aligned_cols=59 Identities=8% Similarity=0.095 Sum_probs=38.7
Q ss_pred ccCcccccCcccc----cccccccccccCchhhhh--------hhccCCCCCCCC----ccceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRPHRR----VNRSASADTYFHPKQQRR--------LLHQTPTGHNNS----FECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~--------~~~~~~~~~~~~----~~a~v~~a~~~lH~~~i~ 359 (361)
..|..++..++++ +...+.+...+|+.++.| +..... +++. ++..++.|++|||++||+
T Consensus 43 ~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~--l~~~~~~~~~~qi~~aL~~LH~~~iv 117 (328)
T cd05593 43 LTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGGELFFHLSRERV--FSEDRTRFYGAEIVSALDYLHSGKIV 117 (328)
T ss_pred HHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCCCHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHhCCeE
Confidence 3455666666666 234666777777777766 122122 4444 278899999999999986
No 66
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=76.41 E-value=0.18 Score=46.92 Aligned_cols=58 Identities=5% Similarity=0.041 Sum_probs=39.4
Q ss_pred cCcccccCcccc----cccccccccccCchhhhh-------hh-ccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 300 GSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LL-HQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 300 ~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~-~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
.|..++..++++ +...+.+..++|+.++.| .+ .+.. +++.- +..++.|+.|||++||+
T Consensus 44 ~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~--~~~~~~~~~~~qi~~aL~~LH~~~iv 117 (323)
T cd05595 44 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERV--FTEERARFYGAEIVSALEYLHSRDVV 117 (323)
T ss_pred HHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCCcHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCeE
Confidence 455666666666 344667777788887766 12 2122 44442 78899999999999986
No 67
>KOG2378|consensus
Probab=75.27 E-value=2.6 Score=40.34 Aligned_cols=45 Identities=22% Similarity=0.389 Sum_probs=39.2
Q ss_pred CCCeechhhhhcccCCCceeeEEEecce-EEEEEEeHHHHHHHHHHCHH
Q psy9025 182 EGSVFGEISLLALAGTNRRTADVRSHGF-SNLFVLNKDDLNEAIEYYPN 229 (361)
Q Consensus 182 ~Gd~fGe~~ll~~~~~~~~~~~v~A~~~-~~~~~l~~~~f~~ll~~~p~ 229 (361)
+||-||..++.. +.||.++++.-++ |-++++++.+|+.++.+..+
T Consensus 1 eGddfgklalvn---d~praativl~ed~~~fl~vDk~~Fn~I~~~vEa 46 (573)
T KOG2378|consen 1 EGDDFGKLALVN---DAPRAATIVLREDNCHFLRVDKHDFNRILHDVEA 46 (573)
T ss_pred CCcccchhcccc---ccccccceeeecCCCcceeecHHHHHHHHHhhhh
Confidence 589999999998 8999998887765 99999999999999886543
No 68
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=75.13 E-value=0.18 Score=47.35 Aligned_cols=59 Identities=12% Similarity=0.128 Sum_probs=41.4
Q ss_pred ccCcccccCcccc----cccccccccccCchhhhh-------hh-ccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LL-HQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~-~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
..|..++..++++ +...+.+..++|+.++.| .+ ++.. +++.. +..++.|++|||++||+
T Consensus 79 ~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~~~~~--~~~~~~~~~~~qi~~aL~~LH~~~iv 153 (340)
T PTZ00426 79 FSERKILNYINHPFCVNLYGSFKDESYLYLVLEFVIGGEFFTFLRRNKR--FPNDVGCFYAAQIVLIFEYLQSLNIV 153 (340)
T ss_pred HHHHHHHHhCCCCCCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCeE
Confidence 4577777777777 344667777788887766 22 2222 55542 78899999999999986
No 69
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=74.09 E-value=0.24 Score=44.75 Aligned_cols=60 Identities=12% Similarity=0.056 Sum_probs=38.7
Q ss_pred cCcccccCcccc----cccccccccccCchhhhh--------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 300 GSKSLNKRPHRR----VNRSASADTYFHPKQQRR--------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 300 ~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~--------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
.|..++..++++ +...+.+..+.|+.++.| +......++++.. +..++.|+.|||++||+
T Consensus 42 ~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~iv 117 (277)
T cd05607 42 LEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIV 117 (277)
T ss_pred HHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEE
Confidence 466777777766 334666667777777765 1121222234432 66899999999999986
No 70
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=73.78 E-value=0.22 Score=46.34 Aligned_cols=61 Identities=5% Similarity=0.072 Sum_probs=39.9
Q ss_pred ccCcccccCcccc----cccccccccccCchhhhh-------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
..|..++....++ +...+.+..++|+.++.| ++++....+++.. .++++.|++|||++||+
T Consensus 49 ~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~ 124 (330)
T cd05601 49 EEERDILSISNSPWIPQLQYAFQDKDNLYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYV 124 (330)
T ss_pred HHHHHHHHhCCCCCCcceeeEEecCCeEEEEECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeE
Confidence 4455566665555 334666777777887766 2332212255553 67899999999999986
No 71
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=72.63 E-value=0.22 Score=46.52 Aligned_cols=61 Identities=8% Similarity=0.103 Sum_probs=40.0
Q ss_pred ccCcccccCcccc----cccccccccccCchhhhh-------hhccCCCCCCCC----ccceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQTPTGHNNS----FECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~~~~~~~~~----~~a~v~~a~~~lH~~~i~ 359 (361)
..|..++..++++ +...+.+..++|+.++.| ++.+....+.|. +..+++.|++|||++||+
T Consensus 49 ~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iv 124 (331)
T cd05597 49 REERDVLVNGDRRWITNLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYV 124 (331)
T ss_pred HHHHHHHHhCCCCCCCceEEEEecCCeEEEEEecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeE
Confidence 4456666665555 344677778888888765 232111124444 278899999999999986
No 72
>TIGR03037 anthran_nbaC 3-hydroxyanthranilate 3,4-dioxygenase. Members of this protein family, from both bacteria and eukaryotes, are the enzyme 3-hydroxyanthranilate 3,4-dioxygenase. This enzyme acts on the tryptophan metabolite 3-hydroxyanthranilate and produces 2-amino-3-carboxymuconate semialdehyde, which can rearrange spontaneously to quinolinic acid and feed into nicotinamide biosynthesis, or undergo further enzymatic degradation.
Probab=71.09 E-value=18 Score=29.92 Aligned_cols=65 Identities=15% Similarity=0.201 Sum_probs=41.3
Q ss_pred CCCCEE-EeCCCCCCeEEEEEeeEEEEE--e-CcEEEEEeCCCCeechhhhhcccCCCceeeEEEecceEEEEEEeHH
Q psy9025 145 LPGDYI-CRKGEVGKEMYIVKTGQVQVV--S-GETVLATLTEGSVFGEISLLALAGTNRRTADVRSHGFSNLFVLNKD 218 (361)
Q Consensus 145 ~~ge~I-~~~G~~~~~ly~I~~G~v~v~--~-~~~~~~~l~~Gd~fGe~~ll~~~~~~~~~~~v~A~~~~~~~~l~~~ 218 (361)
.+|+.. +.. +..+.+|++++|.+.+. . ++.....+++||+|=-.. + -..+-++.++|.+++|.+.
T Consensus 36 Gpn~R~d~H~-~~tdE~FyqleG~~~l~v~d~g~~~~v~L~eGd~flvP~------g--vpHsP~r~~~t~~LvIE~~ 104 (159)
T TIGR03037 36 GPNARTDFHD-DPGEEFFYQLKGEMYLKVTEEGKREDVPIREGDIFLLPP------H--VPHSPQRPAGSIGLVIERK 104 (159)
T ss_pred CCCCCccccc-CCCceEEEEEcceEEEEEEcCCcEEEEEECCCCEEEeCC------C--CCcccccCCCcEEEEEEeC
Confidence 444433 343 34789999999999984 3 334567899999884332 2 2233444567777777654
No 73
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=70.76 E-value=0.39 Score=43.61 Aligned_cols=60 Identities=13% Similarity=0.184 Sum_probs=38.8
Q ss_pred cCcccccCcccc----cccccccccccCchhhhh-------hh-ccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 300 GSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LL-HQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 300 ~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~-~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
.|..++..++++ ++..+.+..++++.++.| .+ ......+++.. +..++.|+.|||+.||+
T Consensus 49 ~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iv 124 (285)
T cd05605 49 NEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIV 124 (285)
T ss_pred HHHHHHHhcCCCCEeeeeeeecCCCeEEEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcE
Confidence 466666666666 344666677777777755 12 11111255543 78899999999999986
No 74
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=70.22 E-value=0.28 Score=45.54 Aligned_cols=52 Identities=10% Similarity=0.020 Sum_probs=34.0
Q ss_pred cCcccc----cccccccccccCchhhhh--------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 306 KRPHRR----VNRSASADTYFHPKQQRR--------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 306 ~~~~~~----~~~t~~d~~~~~~l~~~~--------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
+.++++ +...+.+....|+.++.| +....+ +++.. +.+++.|++|||++||+
T Consensus 51 ~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~qi~~al~~lH~~giv 118 (325)
T cd05604 51 KNVKHPFLVGLHYSFQTTEKLYFVLDFVNGGELFFHLQRERS--FPEPRARFYAAEIASALGYLHSINIV 118 (325)
T ss_pred HhCCCCCCccEEEEEecCCEEEEEEcCCCCCCHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 335555 344666666777777765 122122 44442 78899999999999986
No 75
>KOG0032|consensus
Probab=70.01 E-value=0.33 Score=46.45 Aligned_cols=78 Identities=3% Similarity=-0.034 Sum_probs=53.7
Q ss_pred CcchhHH-HhhcccCcccchhhhccCcccccCcc-cc----cccccccccccCchhhhh--------hhccCCCCCCCC-
Q psy9025 277 PKLLPIV-MQVVPQNSMASKLLRCGSKSLNKRPH-RR----VNRSASADTYFHPKQQRR--------LLHQTPTGHNNS- 341 (361)
Q Consensus 277 ~~~l~~~-~~~i~~~~~~~~vl~~~ek~i~~~~~-~~----~~~t~~d~~~~~~l~~~~--------~~~~~~~~~~~~- 341 (361)
..+.|.+ ++.+........+ ..|-.||.++. ++ ++..|.+..++|+.||-| +... ++.|.
T Consensus 62 ~~A~K~i~k~~~~~~~~~~~v--~~Ev~il~~l~~hpniv~l~~~~e~~~~~~lvmEL~~GGeLfd~i~~~---~~sE~d 136 (382)
T KOG0032|consen 62 EVACKVIPKRKLRGKEDREDV--RREVAILQQLSGHPNIVQLKDAFEDPDSVYLVMELCEGGELFDRIVKK---HYSERD 136 (382)
T ss_pred eeEEEEeehhhccccccHHHH--HHHHHHHHhccCCCCEEEEEEEEEcCCeEEEEEEecCCchHHHHHHHc---cCCHHH
Confidence 4455555 3333332223344 78888898876 66 677999999999999988 2331 13333
Q ss_pred ---ccceeehhhhhhhhcccc
Q psy9025 342 ---FECQVTVHREDIHESHIT 359 (361)
Q Consensus 342 ---~~a~v~~a~~~lH~~~i~ 359 (361)
...+++.|+.|||+.||+
T Consensus 137 a~~~~~~il~av~~lH~~gvv 157 (382)
T KOG0032|consen 137 AAGIIRQILEAVKYLHSLGVV 157 (382)
T ss_pred HHHHHHHHHHHHHHHHhCCce
Confidence 188999999999999997
No 76
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=69.95 E-value=0.25 Score=46.09 Aligned_cols=61 Identities=10% Similarity=0.134 Sum_probs=39.8
Q ss_pred ccCcccccCcccc----cccccccccccCchhhhh-------hhccCCCCCCCC----ccceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQTPTGHNNS----FECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~~~~~~~~~----~~a~v~~a~~~lH~~~i~ 359 (361)
..|..++....++ +...+.+..++|+.++.| ++++....+++. +++.++.|++|||++||+
T Consensus 49 ~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~ii 124 (331)
T cd05624 49 REERNVLVNGDCQWITTLHYAFQDENYLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYV 124 (331)
T ss_pred HHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 4455565555555 344667778888888866 233111124444 278899999999999997
No 77
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=69.87 E-value=0.32 Score=44.98 Aligned_cols=46 Identities=4% Similarity=-0.049 Sum_probs=32.4
Q ss_pred cccccccccccCchhhhh-------hh-ccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 312 VNRSASADTYFHPKQQRR-------LL-HQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 312 ~~~t~~d~~~~~~l~~~~-------~~-~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
++..+.+..++|+.++.| .+ .+.. +++.. ++.++.|++|||++||+
T Consensus 61 ~~~~~~~~~~~~lv~E~~~~g~L~~~i~~~~~--~~~~~~~~~~~qi~~~l~~lH~~~iv 118 (316)
T cd05620 61 LYCTFQTKEHLFFVMEFLNGGDLMFHIQDKGR--FDLYRATFYAAEIVCGLQFLHSKGII 118 (316)
T ss_pred eeEEEEeCCEEEEEECCCCCCcHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCeE
Confidence 344677788888888876 12 2122 44442 78999999999999986
No 78
>COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain [Function unknown]
Probab=69.05 E-value=11 Score=29.74 Aligned_cols=51 Identities=22% Similarity=0.168 Sum_probs=41.0
Q ss_pred cceEEeCCCCEEEeCCCC-CCeEEEEEeeEEEEEeCcEEEEEeCCCCeechhh
Q psy9025 139 LRPVLYLPGDYICRKGEV-GKEMYIVKTGQVQVVSGETVLATLTEGSVFGEIS 190 (361)
Q Consensus 139 l~~~~~~~ge~I~~~G~~-~~~ly~I~~G~v~v~~~~~~~~~l~~Gd~fGe~~ 190 (361)
+....|.||..+-.--.+ .+...+|++|.+.+.-+ .....+.+||++-...
T Consensus 45 ~~~v~~~~G~~~~~H~hp~~~~~~~Vl~G~~~~~~~-g~~~~l~~Gd~i~ip~ 96 (131)
T COG1917 45 VVLVTFEPGAVIPWHTHPLGEQTIYVLEGEGTVQLE-GEKKELKAGDVIIIPP 96 (131)
T ss_pred EEEEEECCCcccccccCCCcceEEEEEecEEEEEec-CCceEecCCCEEEECC
Confidence 457788999998877776 77899999999999855 5567889999886544
No 79
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=68.74 E-value=0.35 Score=44.88 Aligned_cols=58 Identities=7% Similarity=0.037 Sum_probs=36.3
Q ss_pred cCcccccCcccc-----cccccccccccCchhhhh-------hh-ccCCCCCCCC----ccceeehhhhhhhhcccc
Q psy9025 300 GSKSLNKRPHRR-----VNRSASADTYFHPKQQRR-------LL-HQTPTGHNNS----FECQVTVHREDIHESHIT 359 (361)
Q Consensus 300 ~ek~i~~~~~~~-----~~~t~~d~~~~~~l~~~~-------~~-~~~~~~~~~~----~~a~v~~a~~~lH~~~i~ 359 (361)
.|..++..+.++ ++..+.+..++|+.++.| .+ .... +.+. ++..++.|++|||++||+
T Consensus 49 ~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~~~~~--~~~~~~~~~~~qi~~al~~lH~~~iv 123 (324)
T cd05587 49 VEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGK--FKEPHAVFYAAEIAIGLFFLHSKGII 123 (324)
T ss_pred HHHHHHHhcCCCCceeeeEEEEEcCCEEEEEEcCCCCCcHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCeE
Confidence 344555444332 334566667788888766 12 2122 4444 278899999999999986
No 80
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=68.64 E-value=0.41 Score=43.15 Aligned_cols=60 Identities=8% Similarity=-0.016 Sum_probs=37.6
Q ss_pred cCcccccCcccc----cccccccccccCchhhhh------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 300 GSKSLNKRPHRR----VNRSASADTYFHPKQQRR------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 300 ~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
.|-.++..++++ +...+.+..+.++.++.| .+......+++.. +.+++.|+.|||++||+
T Consensus 48 ~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~ 121 (284)
T cd07839 48 REICLLKELKHKNIVRLYDVLHSDKKLTLVFEYCDQDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVL 121 (284)
T ss_pred HHHHHHHhcCCCCeeeHHHHhccCCceEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEe
Confidence 344455555555 334666777777777666 1221111145543 78899999999999986
No 81
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=67.69 E-value=0.34 Score=45.12 Aligned_cols=59 Identities=8% Similarity=0.078 Sum_probs=38.5
Q ss_pred ccCcccccCc-ccc----cccccccccccCchhhhh-------hh-ccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRP-HRR----VNRSASADTYFHPKQQRR-------LL-HQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~-~~~----~~~t~~d~~~~~~l~~~~-------~~-~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
..|..++..+ +++ +...+.+...+|+.++.| .+ .+.. +++.. +..++.|++|||++||+
T Consensus 43 ~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~--l~~~~~~~~~~qi~~~l~~lH~~~iv 118 (329)
T cd05588 43 QTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSGGDLMFHMQRQRK--LPEEHARFYSAEISLALNFLHERGII 118 (329)
T ss_pred HHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCCCCHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCeE
Confidence 4455665553 344 344666777778887766 12 2122 55552 78899999999999986
No 82
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=67.63 E-value=0.3 Score=45.44 Aligned_cols=59 Identities=8% Similarity=0.105 Sum_probs=38.6
Q ss_pred ccCcccccCc-ccc----cccccccccccCchhhhh--------hhccCCCCCCCC----ccceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRP-HRR----VNRSASADTYFHPKQQRR--------LLHQTPTGHNNS----FECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~-~~~----~~~t~~d~~~~~~l~~~~--------~~~~~~~~~~~~----~~a~v~~a~~~lH~~~i~ 359 (361)
..|..++..+ +++ ++..+.+...+|+.++.| +..... +++. ++..++.|+.|||++||+
T Consensus 43 ~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~--l~~~~~~~~~~qi~~al~~lH~~~iv 118 (327)
T cd05617 43 QTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNGGDLMFHMQRQRK--LPEEHARFYAAEICIALNFLHERGII 118 (327)
T ss_pred HHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 3455555553 344 344667777788887766 112122 5555 288999999999999986
No 83
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=66.79 E-value=0.37 Score=44.71 Aligned_cols=61 Identities=15% Similarity=0.000 Sum_probs=38.6
Q ss_pred ccCcccccCcccc----cccccccccccCchhhhh-------hhc-cCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLH-QTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~-~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
..|..+++.++++ +...+.+..+.++.++.| ++. ....++++.. +..++.|+.|||++||+
T Consensus 47 ~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ii 123 (327)
T cd08227 47 QGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYV 123 (327)
T ss_pred HHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEe
Confidence 4566676666666 334666666777776655 221 1122244442 77899999999999986
No 84
>KOG0696|consensus
Probab=65.61 E-value=1.6 Score=41.57 Aligned_cols=80 Identities=11% Similarity=0.137 Sum_probs=48.4
Q ss_pred CcchhHHH-hhccc-CcccchhhhccCcccccCcccc-----cccccccccccCchhhhh-----hhccCCCC-CCCC--
Q psy9025 277 PKLLPIVM-QVVPQ-NSMASKLLRCGSKSLNKRPHRR-----VNRSASADTYFHPKQQRR-----LLHQTPTG-HNNS-- 341 (361)
Q Consensus 277 ~~~l~~~~-~~i~~-~~~~~~vl~~~ek~i~~~~~~~-----~~~t~~d~~~~~~l~~~~-----~~~~~~~~-~~~~-- 341 (361)
..+++.++ ..|.+ -.++.. ..||+++.-...| +...|+--.-+|+.|+.| .++-...| +.|+
T Consensus 376 LyAiKiLkKDViiQdDDvect---m~EKrvLAL~~kppFL~qlHScFQTmDRLyFVMEyvnGGDLMyhiQQ~GkFKEp~A 452 (683)
T KOG0696|consen 376 LYAIKILKKDVIIQDDDVECT---MVEKRVLALPGKPPFLVQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGKFKEPVA 452 (683)
T ss_pred hhhhhhhccceeeecCcccce---ehhhhheecCCCCchHHHHHHHhhhhhheeeEEEEecCchhhhHHHHhcccCCchh
Confidence 44566663 33333 334433 3678887764444 344555555577777777 11100122 5555
Q ss_pred --ccceeehhhhhhhhcccc
Q psy9025 342 --FECQVTVHREDIHESHIT 359 (361)
Q Consensus 342 --~~a~v~~a~~~lH~~~i~ 359 (361)
|||-+..++=+||++|||
T Consensus 453 vFYAaEiaigLFFLh~kgIi 472 (683)
T KOG0696|consen 453 VFYAAEIAIGLFFLHSKGII 472 (683)
T ss_pred hhhhHHHHHHhhhhhcCCee
Confidence 499999999999999998
No 85
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=65.52 E-value=0.81 Score=42.24 Aligned_cols=59 Identities=5% Similarity=0.042 Sum_probs=37.2
Q ss_pred cCcccccCcccc----cccccccccccCchhhhh-------hhccCCCCCCCC----ccceeehhhhhhhhcccc
Q psy9025 300 GSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQTPTGHNNS----FECQVTVHREDIHESHIT 359 (361)
Q Consensus 300 ~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~~~~~~~~~----~~a~v~~a~~~lH~~~i~ 359 (361)
.|..++..+.++ +...+.+...+|+.++.| .+.+. ..+++. ++..++.|+.|||+.||+
T Consensus 47 ~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~i~ 120 (318)
T cd05582 47 MERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKE-VMFTEEDVKFYLAELALALDHLHSLGII 120 (318)
T ss_pred HHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCEe
Confidence 344555555555 334566667777777766 12211 114444 278899999999999986
No 86
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=65.44 E-value=0.84 Score=42.33 Aligned_cols=59 Identities=7% Similarity=0.057 Sum_probs=38.5
Q ss_pred ccCcccccCcccc----cccccccccccCchhhhh-------hh-ccCCCCCCCC----ccceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LL-HQTPTGHNNS----FECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~-~~~~~~~~~~----~~a~v~~a~~~lH~~~i~ 359 (361)
..|..++..++++ +...+.++..+|+.++.| .+ +... +.+. +.+.++.|++|||++||+
T Consensus 48 ~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~qi~~~l~~lH~~~iv 122 (323)
T cd05584 48 KAERNILEAVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMHLEREGI--FMEDTACFYLSEISLALEHLHQQGII 122 (323)
T ss_pred HHHHHHHHhCCCCchhceeeEEecCCeEEEEEeCCCCchHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 4556666666666 344666777777777765 12 2122 3433 267899999999999986
No 87
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=64.85 E-value=0.47 Score=43.03 Aligned_cols=61 Identities=8% Similarity=0.105 Sum_probs=37.3
Q ss_pred ccCcccccCcccc----cccccccccccCchhhhh-------hh-ccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LL-HQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~-~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
..|..++..++++ +...+.+..++++.++.+ .+ ......+++.. +..++.|++|||++||+
T Consensus 48 ~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ii 124 (285)
T cd05632 48 LNEKQILEKVNSQFVVNLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTV 124 (285)
T ss_pred HHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 3466666666655 233556666666666544 11 11111245543 78899999999999986
No 88
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=64.81 E-value=0.89 Score=41.57 Aligned_cols=60 Identities=15% Similarity=0.063 Sum_probs=36.6
Q ss_pred cCcccccCcccc----cccccccccccCchhhhh------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 300 GSKSLNKRPHRR----VNRSASADTYFHPKQQRR------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 300 ~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
.|..++..+.++ ++..+.+..+.++.++.| .+.....++++.. ...++.|+.|||++||+
T Consensus 52 ~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~iv 125 (303)
T cd07869 52 REASLLKGLKHANIVLLHDIIHTKETLTLVFEYVHTDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYIL 125 (303)
T ss_pred HHHHHHhhCCCCCcCeEEEEEecCCeEEEEEECCCcCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 344445555544 334566666777777665 2222222244442 77899999999999986
No 89
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=64.53 E-value=0.43 Score=43.83 Aligned_cols=61 Identities=15% Similarity=0.023 Sum_probs=36.8
Q ss_pred cCcccccCcccc----cccccccccccCchhhhh-------hhcc-CCCCCCCCc----cceeehhhhhhhhccccC
Q psy9025 300 GSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQ-TPTGHNNSF----ECQVTVHREDIHESHITS 360 (361)
Q Consensus 300 ~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~-~~~~~~~~~----~a~v~~a~~~lH~~~i~~ 360 (361)
.|-.++..++++ +...+.+...+++.++.| ++++ .+.++++.. +..++.|+.|||++||+-
T Consensus 48 ~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH 124 (314)
T cd08216 48 QEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIH 124 (314)
T ss_pred HHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 344444444444 334556666677776655 2221 122355553 778999999999999863
No 90
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=64.48 E-value=0.59 Score=42.25 Aligned_cols=61 Identities=16% Similarity=0.226 Sum_probs=37.6
Q ss_pred ccCcccccCcccc----cccccccccccCchhhhh----h---h-c--cCCCCCCCC----ccceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRPHRR----VNRSASADTYFHPKQQRR----L---L-H--QTPTGHNNS----FECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~----~---~-~--~~~~~~~~~----~~a~v~~a~~~lH~~~i~ 359 (361)
..|..++..++++ +...+.+...+|+.++.| + + . .....+++. ++..++.|+.|||++||+
T Consensus 41 ~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~ 119 (280)
T cd05608 41 MVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRII 119 (280)
T ss_pred HHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 3466667777666 333455666667776655 1 1 1 011124444 278899999999999986
No 91
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=64.29 E-value=0.5 Score=42.70 Aligned_cols=60 Identities=12% Similarity=0.047 Sum_probs=37.5
Q ss_pred cCcccccCcccc----cccccccccccCchhhhh------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 300 GSKSLNKRPHRR----VNRSASADTYFHPKQQRR------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 300 ~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
.|-.++..++++ +...+.+..++|+.++.| .+...+.++++.. ...++.|+.|||+.||+
T Consensus 49 ~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~ 122 (287)
T cd07848 49 RELKMLRTLKQENIVELKEAFRRRGKLYLVFEYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIV 122 (287)
T ss_pred HHHHHHHhCCCccccchhhhEecCCEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 344445555544 334666677777787766 1221222355542 77899999999999986
No 92
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=64.17 E-value=0.43 Score=44.26 Aligned_cols=52 Identities=10% Similarity=0.020 Sum_probs=33.9
Q ss_pred cCcccc----cccccccccccCchhhhh-------hh-ccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 306 KRPHRR----VNRSASADTYFHPKQQRR-------LL-HQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 306 ~~~~~~----~~~t~~d~~~~~~l~~~~-------~~-~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
+.++++ +...+.+...+|++++.| .+ ++.+ +++.. +..++.|++|||++||+
T Consensus 51 ~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~--~~~~~~~~~~~qi~~~l~~lH~~giv 118 (323)
T cd05575 51 KNVKHPFLVGLHYSFQTADKLYFVLDYVNGGELFFHLQRERS--FPEPRARFYAAEIASALGYLHSLNII 118 (323)
T ss_pred hhCCCCCCCCeeEEEEeCCEEEEEEcCCCCCCHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCeE
Confidence 345555 334566667777777766 12 2222 44442 77899999999999986
No 93
>KOG0579|consensus
Probab=64.14 E-value=1.3 Score=44.58 Aligned_cols=60 Identities=8% Similarity=-0.108 Sum_probs=44.5
Q ss_pred cCcccccCcccc----cccccccccccCchhhhh--------hhccCCCCCCCCc----cceeehhhhhhhhccccC
Q psy9025 300 GSKSLNKRPHRR----VNRSASADTYFHPKQQRR--------LLHQTPTGHNNSF----ECQVTVHREDIHESHITS 360 (361)
Q Consensus 300 ~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~--------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~~ 360 (361)
-|-+|+..|++| ++.+|--..-+.||++.| ++. -.+++.|+- .-.|+.|+.|||+++||-
T Consensus 78 VEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~GGAVDaimlE-L~r~LtE~QIqvvc~q~ldALn~LHs~~iIH 153 (1187)
T KOG0579|consen 78 VEIEILAECDHPVIVKLLSAYYFENKLWILIEFCGGGAVDAIMLE-LGRVLTEDQIQVVCYQVLDALNWLHSQNIIH 153 (1187)
T ss_pred hhhhhhhcCCChHHHHHHHHHhccCceEEEEeecCCchHhHHHHH-hccccchHHHHHHHHHHHHHHHHHhhcchhh
Confidence 367899999999 556665556678899998 222 224488884 556899999999999983
No 94
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=63.51 E-value=0.52 Score=43.69 Aligned_cols=47 Identities=6% Similarity=0.016 Sum_probs=31.7
Q ss_pred cccccccccccCchhhhh-------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 312 VNRSASADTYFHPKQQRR-------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 312 ~~~t~~d~~~~~~l~~~~-------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
++..+.+...+|+.++.| .+.+. ..+++.. ++.++.|++|||++||+
T Consensus 61 ~~~~~~~~~~~~iv~Ey~~~g~L~~~i~~~-~~l~~~~~~~~~~ql~~~L~~lH~~~iv 118 (320)
T cd05590 61 LYCCFQTPDRLFFVMEFVNGGDLMFHIQKS-RRFDEARARFYAAEITSALMFLHDKGII 118 (320)
T ss_pred eeeEEEcCCEEEEEEcCCCCchHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeE
Confidence 344666777777777765 12211 1255552 78899999999999986
No 95
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=62.99 E-value=0.49 Score=44.11 Aligned_cols=59 Identities=8% Similarity=0.107 Sum_probs=36.6
Q ss_pred ccCcccccC-cccc----cccccccccccCchhhhh--------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKR-PHRR----VNRSASADTYFHPKQQRR--------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~-~~~~----~~~t~~d~~~~~~l~~~~--------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
..|..++.. .+++ +...+.+...+|+.++.| +..... +++.. ++.++.|++|||++||+
T Consensus 43 ~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~~~L~~~~~~~~~--l~~~~~~~i~~qi~~~l~~lH~~~iv 118 (329)
T cd05618 43 QTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRK--LPEEHARFYSAEISLALNYLHERGII 118 (329)
T ss_pred HHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCCCCHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 344444444 2344 334566667777777765 112122 55542 78999999999999986
No 96
>KOG0198|consensus
Probab=62.89 E-value=1.7 Score=40.23 Aligned_cols=60 Identities=10% Similarity=0.034 Sum_probs=38.0
Q ss_pred ccCcccccCcccc--ccc----ccccccccCchhhhh--------hhccCCCCCCCC----ccceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRPHRR--VNR----SASADTYFHPKQQRR--------LLHQTPTGHNNS----FECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~~~--~~~----t~~d~~~~~~l~~~~--------~~~~~~~~~~~~----~~a~v~~a~~~lH~~~i~ 359 (361)
..|-.|+.++.++ |.. +...+...+++|+.| +.+.+. .++|+ |+.|+++++.|||++||+
T Consensus 62 ~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mEy~~~GsL~~~~~~~g~-~l~E~~v~~ytr~iL~GL~ylHs~g~v 139 (313)
T KOG0198|consen 62 EREIRILSRLNHPNIVQYYGSSSSRENDEYNIFMEYAPGGSLSDLIKRYGG-KLPEPLVRRYTRQILEGLAYLHSKGIV 139 (313)
T ss_pred HHHHHHHHhCCCCCEEeeCCccccccCeeeEeeeeccCCCcHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHhCCEe
Confidence 4556666666655 211 122223567777776 222121 37787 499999999999999997
No 97
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=62.68 E-value=0.51 Score=43.79 Aligned_cols=44 Identities=7% Similarity=-0.055 Sum_probs=30.4
Q ss_pred cccccccccCchhhhh-------hh-ccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 314 RSASADTYFHPKQQRR-------LL-HQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 314 ~t~~d~~~~~~l~~~~-------~~-~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
..+.+...+|+.++.| .+ .... +++.. +..++.|+.|||++||+
T Consensus 68 ~~~~~~~~~~lv~Ey~~~g~L~~~i~~~~~--l~~~~~~~i~~qi~~al~~lH~~~iv 123 (323)
T cd05615 68 SCFQTVDRLYFVMEYVNGGDLMYHIQQVGK--FKEPQAVFYAAEISVGLFFLHRRGII 123 (323)
T ss_pred eEEecCCEEEEEEcCCCCCcHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 3566667778887766 11 2122 44542 78899999999999986
No 98
>smart00835 Cupin_1 Cupin. This family represents the conserved barrel domain of the 'cupin' superfamily ('cupa' is the Latin term for a small barrel). This family contains 11S and 7S plant seed storage proteins, and germins. Plant seed storage proteins provide the major nitrogen source for the developing plant.
Probab=62.32 E-value=50 Score=26.58 Aligned_cols=75 Identities=20% Similarity=0.165 Sum_probs=46.0
Q ss_pred cceEEeCCCCEEEeCCCC-CCeEEEEEeeEEEEE--e---CcEEEEEeCCCCeechhhhhcccCCCceeeEEEecceEEE
Q psy9025 139 LRPVLYLPGDYICRKGEV-GKEMYIVKTGQVQVV--S---GETVLATLTEGSVFGEISLLALAGTNRRTADVRSHGFSNL 212 (361)
Q Consensus 139 l~~~~~~~ge~I~~~G~~-~~~ly~I~~G~v~v~--~---~~~~~~~l~~Gd~fGe~~ll~~~~~~~~~~~v~A~~~~~~ 212 (361)
+....+.+|...-..-.+ .+.+++|++|...+. + ++.....+.+||.|=..+ +..........+++.+
T Consensus 32 ~~~~~i~pg~~~~~h~H~~~~e~~~Vl~G~~~~~~~~~~~~~~~~~~l~~GD~~~ip~------g~~H~~~n~~~~~~~~ 105 (146)
T smart00835 32 AARVNLEPGGMLPPHYHPRATELLYVVRGEGRVGVVDPNGNKVYDARLREGDVFVVPQ------GHPHFQVNSGDENLEF 105 (146)
T ss_pred EEEEEecCCcCcCCeeCCCCCEEEEEEeCeEEEEEEeCCCCeEEEEEecCCCEEEECC------CCEEEEEcCCCCCEEE
Confidence 456677888876544333 578999999999886 2 234578899999774432 2222222223345666
Q ss_pred EEEeHHH
Q psy9025 213 FVLNKDD 219 (361)
Q Consensus 213 ~~l~~~~ 219 (361)
+.++..+
T Consensus 106 l~~~~~~ 112 (146)
T smart00835 106 VAFNTND 112 (146)
T ss_pred EEEecCC
Confidence 6664443
No 99
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=62.26 E-value=0.46 Score=44.30 Aligned_cols=61 Identities=7% Similarity=0.090 Sum_probs=39.4
Q ss_pred ccCcccccCcccc----cccccccccccCchhhhh-------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
..|..++...+++ +...+.+...+|+.++.| ++++....+++.. .+.++.|++|||++||+
T Consensus 49 ~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ii 124 (332)
T cd05623 49 REERDVLVNGDNQWITTLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYV 124 (332)
T ss_pred HHHHHHHhhCCCCCEeeEEEEEecCCEEEEEEeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeE
Confidence 4556666665555 344666777777787765 3332111245542 77899999999999986
No 100
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=62.25 E-value=0.57 Score=43.38 Aligned_cols=47 Identities=6% Similarity=0.038 Sum_probs=31.6
Q ss_pred cccccccccccCchhhhh-------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 312 VNRSASADTYFHPKQQRR-------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 312 ~~~t~~d~~~~~~l~~~~-------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
++..+.+...+|+.++.| .+.+ ...+++.. +..++.|+.|||++||+
T Consensus 61 ~~~~~~~~~~~~lv~E~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~iv 118 (321)
T cd05591 61 LHCCFQTKDRLFFVMEYVNGGDLMFQIQR-SRKFDEPRSRFYAAEVTLALMFLHRHGVI 118 (321)
T ss_pred eeeEEEcCCeEEEEEeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 344666777777887766 1221 11255542 78899999999999986
No 101
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=61.24 E-value=0.57 Score=42.52 Aligned_cols=60 Identities=15% Similarity=0.108 Sum_probs=39.0
Q ss_pred ccCcccccCcccc----cccccccccccCchhhhh-------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
..|-.++++++++ +...+.++.+.|+.++.| .+... ..+++.. +..++.|+.|||+.||+
T Consensus 49 ~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~-~~l~~~~~~~~~~qil~~l~~lH~~~i~ 123 (290)
T cd05580 49 LNEKRILQSIRHPFLVNLYGSFQDDSNLYLVMEYVPGGELFSHLRKS-GRFPEPVARFYAAQVVLALEYLHSLDIV 123 (290)
T ss_pred HHHHHHHHhCCCCCccceeeEEEcCCeEEEEEecCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCEe
Confidence 3455566666555 445677777777777766 22211 1244442 77899999999999986
No 102
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=61.06 E-value=1.3 Score=39.84 Aligned_cols=59 Identities=8% Similarity=0.000 Sum_probs=35.3
Q ss_pred CcccccCcccc----cccccccccccCchhhhh-------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 301 SKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 301 ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
|..++..+.++ ++..+.+..+.+++++.| ++++....+++.. +..++.|++|||++||+
T Consensus 66 ~~~~~~~l~h~niv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ii 139 (274)
T cd05076 66 TASLMSQVSHIHLAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLV 139 (274)
T ss_pred HHHHHhcCCCCCeeeEEEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCcc
Confidence 34455555555 333455556666676655 2221111245443 77899999999999986
No 103
>PHA03207 serine/threonine kinase US3; Provisional
Probab=60.52 E-value=1.5 Score=42.01 Aligned_cols=58 Identities=9% Similarity=0.004 Sum_probs=36.4
Q ss_pred cCcccccCcccc----cccccccccccCchhhhh------hh-ccCCCCCCCC----ccceeehhhhhhhhcccc
Q psy9025 300 GSKSLNKRPHRR----VNRSASADTYFHPKQQRR------LL-HQTPTGHNNS----FECQVTVHREDIHESHIT 359 (361)
Q Consensus 300 ~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~------~~-~~~~~~~~~~----~~a~v~~a~~~lH~~~i~ 359 (361)
.|..+++.++++ +...+.+....++.++.+ .+ ...+ +.+. ++.+++.|+.|||++||+
T Consensus 135 ~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~--l~~~~~~~i~~ql~~aL~~LH~~giv 207 (392)
T PHA03207 135 REIDILKTISHRAIINLIHAYRWKSTVCMVMPKYKCDLFTYVDRSGP--LPLEQAITIQRRLLEALAYLHGRGII 207 (392)
T ss_pred HHHHHHHhcCCCCccceeeeEeeCCEEEEEehhcCCCHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 355566666665 334556666666666554 12 1122 4433 288999999999999997
No 104
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=59.57 E-value=0.6 Score=43.39 Aligned_cols=45 Identities=13% Similarity=0.098 Sum_probs=30.4
Q ss_pred ccccccccccCchhhhh-------hh-ccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 313 NRSASADTYFHPKQQRR-------LL-HQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 313 ~~t~~d~~~~~~l~~~~-------~~-~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
...+.+....|+.++.| .+ ++.. +++.- +++++.|+.|||++||+
T Consensus 62 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~--~~~~~~~~~~~qil~al~~LH~~~iv 118 (330)
T cd05586 62 KFSFQTDSDLYLVTDYMSGGELFWHLQKEGR--FSEDRAKFYIAELVLALEHLHKYDIV 118 (330)
T ss_pred EEEEecCCeEEEEEcCCCCChHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCeE
Confidence 34566667777777765 12 2122 45442 78899999999999986
No 105
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=59.18 E-value=0.59 Score=43.38 Aligned_cols=58 Identities=5% Similarity=0.059 Sum_probs=37.4
Q ss_pred cCcccccCcccc----cccccccccccCchhhhh-------hh-ccCCCCCCCCc----cceeehhhhhhhh-cccc
Q psy9025 300 GSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LL-HQTPTGHNNSF----ECQVTVHREDIHE-SHIT 359 (361)
Q Consensus 300 ~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~-~~~~~~~~~~~----~a~v~~a~~~lH~-~~i~ 359 (361)
.|..++..++++ +...+.+..++|+.++.| .+ ++.. +++.- +..++.|+.|||+ +||+
T Consensus 44 ~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~--l~~~~~~~~~~qi~~aL~~lH~~~~iv 118 (325)
T cd05594 44 TENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERV--FSEDRARFYGAEIVSALDYLHSEKNVV 118 (325)
T ss_pred HHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCCcHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHhcCCEE
Confidence 445555555555 334667777788887766 12 2122 44442 7789999999997 7886
No 106
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=59.16 E-value=1.3 Score=40.07 Aligned_cols=60 Identities=13% Similarity=0.016 Sum_probs=35.5
Q ss_pred cCcccccCcccc----cccccccccccCchhhhh------hhccCCCCCCCC----ccceeehhhhhhhhcccc
Q psy9025 300 GSKSLNKRPHRR----VNRSASADTYFHPKQQRR------LLHQTPTGHNNS----FECQVTVHREDIHESHIT 359 (361)
Q Consensus 300 ~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~------~~~~~~~~~~~~----~~a~v~~a~~~lH~~~i~ 359 (361)
.|..++..++++ +...+.+..+.|+.++.| .+......+++. ++..++.|+.|||++||+
T Consensus 52 ~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~iv 125 (288)
T cd07871 52 REVSLLKNLKHANIVTLHDIIHTERCLTLVFEYLDSDLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKIL 125 (288)
T ss_pred HHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeCCCcCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 455555555555 333555666666776655 122111113332 277899999999999996
No 107
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=59.02 E-value=2.2 Score=39.53 Aligned_cols=44 Identities=11% Similarity=0.145 Sum_probs=29.3
Q ss_pred cccccccccCchhhhh-------hhccCCCCCCCC----ccceeehhhhhhhhcccc
Q psy9025 314 RSASADTYFHPKQQRR-------LLHQTPTGHNNS----FECQVTVHREDIHESHIT 359 (361)
Q Consensus 314 ~t~~d~~~~~~l~~~~-------~~~~~~~~~~~~----~~a~v~~a~~~lH~~~i~ 359 (361)
..+.+..++|+.++.| .+++.. +++. ++.+++.|+.|||+.||+
T Consensus 69 ~~~~~~~~~~lv~E~~~~~~L~~~~~~~~--l~~~~~~~~~~qi~~al~~lH~~~iv 123 (324)
T cd05589 69 ACFQTEDHVCFVMEYAAGGDLMMHIHTDV--FSEPRAVFYAACVVLGLQYLHENKIV 123 (324)
T ss_pred eEEEcCCEEEEEEcCCCCCcHHHHhhcCC--CCHHHHHHHHHHHHHHHHHHHhCCeE
Confidence 3455556667777655 122222 4444 288899999999999986
No 108
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=58.75 E-value=1.1 Score=40.21 Aligned_cols=60 Identities=12% Similarity=0.036 Sum_probs=36.5
Q ss_pred cCcccccCcccc----cccccccccccCchhhhh------hhccCC-CCCCCCc----cceeehhhhhhhhcccc
Q psy9025 300 GSKSLNKRPHRR----VNRSASADTYFHPKQQRR------LLHQTP-TGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 300 ~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~------~~~~~~-~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
.|-.++.+++++ +...+.+..+.++.++.+ .++..+ ..+++.. ++.++.|+.|||+.||+
T Consensus 48 ~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~ 122 (284)
T cd07860 48 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVL 122 (284)
T ss_pred HHHHHHHhcCCCCCcchhhhcccCCcEEEEeeccccCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 344555555555 334556666777776655 122111 1144442 77899999999999986
No 109
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=58.63 E-value=1.1 Score=41.69 Aligned_cols=59 Identities=14% Similarity=0.057 Sum_probs=35.5
Q ss_pred ccCcccccCcccc----cccccc-cccccCchhhhh------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRPHRR----VNRSAS-ADTYFHPKQQRR------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~~~----~~~t~~-d~~~~~~l~~~~------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
..|..++..++++ +...+. ++.++|+.++.+ +++..+ +++.. ++.++.|+.|||+.||+
T Consensus 57 ~~E~~~l~~l~hpniv~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~--~~~~~~~~~~~ql~~aL~~LH~~~ii 130 (328)
T cd07856 57 YRELKLLKHLRHENIISLSDIFISPLEDIYFVTELLGTDLHRLLTSRP--LEKQFIQYFLYQILRGLKYVHSAGVV 130 (328)
T ss_pred HHHHHHHHhcCCCCeeeEeeeEecCCCcEEEEeehhccCHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 3455566666555 223332 244555666554 233233 44442 78899999999999986
No 110
>PHA03209 serine/threonine kinase US3; Provisional
Probab=58.16 E-value=1.4 Score=41.56 Aligned_cols=59 Identities=10% Similarity=-0.006 Sum_probs=34.7
Q ss_pred CcccccCcccc----cccccccccccCchhhhh------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 301 SKSLNKRPHRR----VNRSASADTYFHPKQQRR------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 301 ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
|..++..++++ +...+.+..+.++.++.+ .+.+....+++.. +..++.|+.|||++||+
T Consensus 107 E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~iv 179 (357)
T PHA03209 107 EAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHYSSDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRII 179 (357)
T ss_pred HHHHHHhCCCCCCcChhheEEeCCeeEEEEEccCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 44555555555 333555566555555544 1221111244432 78899999999999986
No 111
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=57.42 E-value=1.5 Score=39.56 Aligned_cols=60 Identities=10% Similarity=-0.018 Sum_probs=36.0
Q ss_pred cCcccccCcccc----cccccccccccCchhhhh------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 300 GSKSLNKRPHRR----VNRSASADTYFHPKQQRR------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 300 ~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
.|..+++.++++ +...+.+..+.|+.++.+ .+.+.+..+++.. ...++.|+.|||++||+
T Consensus 52 ~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~ 125 (291)
T cd07844 52 REASLLKDLKHANIVTLHDIIHTKKTLTLVFEYLDTDLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVL 125 (291)
T ss_pred HHHHHHhhCCCcceeeEEEEEecCCeEEEEEecCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 455555555555 333455566666666655 1222222244442 67899999999999986
No 112
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=57.25 E-value=0.94 Score=42.92 Aligned_cols=17 Identities=18% Similarity=0.108 Sum_probs=15.8
Q ss_pred cceeehhhhhhhhcccc
Q psy9025 343 ECQVTVHREDIHESHIT 359 (361)
Q Consensus 343 ~a~v~~a~~~lH~~~i~ 359 (361)
+..++.|+.|||++||+
T Consensus 109 ~~qi~~aL~~LH~~~iv 125 (372)
T cd07853 109 LYQILRGLKYLHSAGIL 125 (372)
T ss_pred HHHHHHHHHHHHhCCee
Confidence 78899999999999986
No 113
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=56.97 E-value=2 Score=39.84 Aligned_cols=45 Identities=9% Similarity=0.005 Sum_probs=28.9
Q ss_pred cccccccccCchhhhh-------hhccCCCCCCCC----ccceeehhhhhhhhcccc
Q psy9025 314 RSASADTYFHPKQQRR-------LLHQTPTGHNNS----FECQVTVHREDIHESHIT 359 (361)
Q Consensus 314 ~t~~d~~~~~~l~~~~-------~~~~~~~~~~~~----~~a~v~~a~~~lH~~~i~ 359 (361)
..+.+...+|+.++.| .+.+ ...+.+. ++.+++.|++|||+.||+
T Consensus 63 ~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~gii 118 (325)
T cd05602 63 FSFQTADKLYFVLDYINGGELFYHLQR-ERCFLEPRARFYAAEIASALGYLHSLNIV 118 (325)
T ss_pred EEEEcCCeEEEEEeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeE
Confidence 3555566667777655 1221 1114443 278999999999999986
No 114
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=56.79 E-value=0.85 Score=42.17 Aligned_cols=45 Identities=4% Similarity=0.036 Sum_probs=31.0
Q ss_pred ccccccccccCchhhhh-------hh-ccCCCCCCCC----ccceeehhhhhhhhcccc
Q psy9025 313 NRSASADTYFHPKQQRR-------LL-HQTPTGHNNS----FECQVTVHREDIHESHIT 359 (361)
Q Consensus 313 ~~t~~d~~~~~~l~~~~-------~~-~~~~~~~~~~----~~a~v~~a~~~lH~~~i~ 359 (361)
...+.+..++|+.++.| .+ .... +++. ++.+++.|+.|||++||+
T Consensus 62 ~~~~~~~~~~~lv~e~~~gg~L~~~~~~~~~--~~~~~~~~~~~qi~~al~~LH~~~iv 118 (316)
T cd05592 62 FCTFQTKEHLFFVMEYLNGGDLMFHIQSSGR--FDEARARFYAAEIICGLQFLHKKGII 118 (316)
T ss_pred eeEEEcCCEEEEEEcCCCCCcHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCEE
Confidence 34666777788887766 12 2122 5554 278899999999999986
No 115
>COG3718 IolB Uncharacterized enzyme involved in inositol metabolism [Carbohydrate transport and metabolism]
Probab=55.79 E-value=34 Score=30.03 Aligned_cols=78 Identities=14% Similarity=0.138 Sum_probs=50.4
Q ss_pred cceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEEeCcEEEEEeC-CCCeech---hhhhcccCCCceeeEEEecceEEEEE
Q psy9025 139 LRPVLYLPGDYICRKGEVGKEMYIVKTGQVQVVSGETVLATLT-EGSVFGE---ISLLALAGTNRRTADVRSHGFSNLFV 214 (361)
Q Consensus 139 l~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~~~~~~~~l~-~Gd~fGe---~~ll~~~~~~~~~~~v~A~~~~~~~~ 214 (361)
+....+.+|+..-..-..-+...+++.|++.+...+.....++ .-++|-. .++.- ..-+.+++.|.+++++.+
T Consensus 31 F~~~~L~~Ges~~~~~~~~E~clV~v~Gk~~vs~~g~~f~~iG~R~SvFe~~p~~~vYv---p~g~~~~vtA~t~~~vAv 107 (270)
T COG3718 31 FRLLRLAAGESATEETGDRERCLVLVTGKATVSAHGSTFGEIGTRMSVFERKPPDSVYV---PAGSAFSVTATTDLEVAV 107 (270)
T ss_pred EEEEEccCCCcccccCCCceEEEEEEeeeEEEeeccchHhhcccccccccCCCCCeEEe---cCCceEEEEeecceEEEE
Confidence 5566788999886666666778888999999986554444444 2233322 12222 345688999999987776
Q ss_pred EeHHH
Q psy9025 215 LNKDD 219 (361)
Q Consensus 215 l~~~~ 219 (361)
-+...
T Consensus 108 C~AP~ 112 (270)
T COG3718 108 CSAPG 112 (270)
T ss_pred EeCCC
Confidence 65443
No 116
>PRK13264 3-hydroxyanthranilate 3,4-dioxygenase; Provisional
Probab=55.01 E-value=38 Score=28.54 Aligned_cols=56 Identities=14% Similarity=0.153 Sum_probs=37.0
Q ss_pred CCCCeEEEEEeeEEEEEe--Cc-EEEEEeCCCCeechhhhhcccCCCceeeEEEecceEEEEEEeHH
Q psy9025 155 EVGKEMYIVKTGQVQVVS--GE-TVLATLTEGSVFGEISLLALAGTNRRTADVRSHGFSNLFVLNKD 218 (361)
Q Consensus 155 ~~~~~ly~I~~G~v~v~~--~~-~~~~~l~~Gd~fGe~~ll~~~~~~~~~~~v~A~~~~~~~~l~~~ 218 (361)
++.+.+|++++|.+.+.- ++ .....+.+||+|=-.+ +.+ .+-++.++|.++++.+.
T Consensus 52 ~~tdE~FyqleG~~~l~v~d~g~~~~v~L~eGd~fllP~------gvp--HsP~r~~~tv~LviE~~ 110 (177)
T PRK13264 52 DPGEEFFYQLEGDMYLKVQEDGKRRDVPIREGEMFLLPP------HVP--HSPQREAGSIGLVIERK 110 (177)
T ss_pred CCCceEEEEECCeEEEEEEcCCceeeEEECCCCEEEeCC------CCC--cCCccCCCeEEEEEEeC
Confidence 567899999999988762 32 3567899999884333 222 22334567777777654
No 117
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=54.91 E-value=0.86 Score=42.15 Aligned_cols=46 Identities=7% Similarity=0.064 Sum_probs=31.5
Q ss_pred cccccccccccCchhhhh--------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 312 VNRSASADTYFHPKQQRR--------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 312 ~~~t~~d~~~~~~l~~~~--------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
++..+.+...+|++++.| +.+... +++.. +..++.|+.|||++||+
T Consensus 61 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~--l~~~~~~~~~~qi~~~l~~LH~~~iv 118 (318)
T cd05570 61 LHSCFQTKDRLFFVMEYVNGGDLMFHIQRSGR--FDEPRARFYAAEIVLGLQFLHERGII 118 (318)
T ss_pred eeeEEEcCCEEEEEEcCCCCCCHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHhCCeE
Confidence 344566677788888766 122112 55542 77899999999999986
No 118
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=54.65 E-value=2.4 Score=39.16 Aligned_cols=44 Identities=11% Similarity=0.008 Sum_probs=28.8
Q ss_pred cccccccccCchhhhh--------hhccCCCCCCCC----ccceeehhhhhhhhcccc
Q psy9025 314 RSASADTYFHPKQQRR--------LLHQTPTGHNNS----FECQVTVHREDIHESHIT 359 (361)
Q Consensus 314 ~t~~d~~~~~~l~~~~--------~~~~~~~~~~~~----~~a~v~~a~~~lH~~~i~ 359 (361)
..+.+...+|+.++.| +.++.. +.+. ++..++.|+.|||+.||+
T Consensus 63 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~qi~~~L~~lH~~~iv 118 (321)
T cd05603 63 YSFQTAEKLYFVLDYVNGGELFFHLQRERC--FLEPRARFYAAEVASAIGYLHSLNII 118 (321)
T ss_pred eEEEcCCEEEEEEcCCCCCCHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCeE
Confidence 3455566677777665 112112 4443 278999999999999986
No 119
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=54.57 E-value=1 Score=39.99 Aligned_cols=60 Identities=13% Similarity=0.090 Sum_probs=35.7
Q ss_pred ccCcccccCcccc----cccccccccccCchhhhh-------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
..|..++..++++ +...+.+..++|++++.+ .+.+.. .+++.. ...++.|+.|||++||+
T Consensus 41 ~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~~i~~~l~~lH~~~~~ 115 (262)
T cd05572 41 FSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGELWTILRDRG-LFDEYTARFYIACVVLAFEYLHNRGII 115 (262)
T ss_pred HHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHhhCCcc
Confidence 4444455555555 334556666777776644 222111 134432 66799999999999986
No 120
>PHA03210 serine/threonine kinase US3; Provisional
Probab=53.85 E-value=2.5 Score=42.06 Aligned_cols=61 Identities=10% Similarity=0.038 Sum_probs=35.4
Q ss_pred ccCcccccCcccc----cccccccccccCchhhhh-------hhccCCCCCCC-------Cccceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQTPTGHNN-------SFECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~~~~~~~~-------~~~a~v~~a~~~lH~~~i~ 359 (361)
..|-.++..++++ +...+.+..+.|+.++.+ +..+....... .+..+++.|++|||++||+
T Consensus 211 ~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIi 289 (501)
T PHA03210 211 ENEILALGRLNHENILKIEEILRSEANTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLI 289 (501)
T ss_pred HHHHHHHHhCCCCCcCcEeEEEEECCeeEEEEeccccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCee
Confidence 4566677777766 333555556666654433 11111100000 1377899999999999997
No 121
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=53.77 E-value=0.96 Score=41.03 Aligned_cols=61 Identities=13% Similarity=0.234 Sum_probs=37.0
Q ss_pred ccCcccccCcccc----cccccccccccCchhhhh-------hh-ccCCCCCCCC----ccceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LL-HQTPTGHNNS----FECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~-~~~~~~~~~~----~~a~v~~a~~~lH~~~i~ 359 (361)
..|..++..++++ +...+.+..++++.++.+ .+ +....++++. ++..++.|+.|||+.||+
T Consensus 48 ~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ii 124 (285)
T cd05630 48 LNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIV 124 (285)
T ss_pred HHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEE
Confidence 3455666666555 333566666666666543 12 1122224444 277899999999999986
No 122
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=53.48 E-value=1.3 Score=40.99 Aligned_cols=17 Identities=18% Similarity=0.128 Sum_probs=15.7
Q ss_pred cceeehhhhhhhhcccc
Q psy9025 343 ECQVTVHREDIHESHIT 359 (361)
Q Consensus 343 ~a~v~~a~~~lH~~~i~ 359 (361)
+..++.|+.|||++||+
T Consensus 109 ~~qi~~aL~~LH~~~iv 125 (338)
T cd07859 109 LYQLLRALKYIHTANVF 125 (338)
T ss_pred HHHHHHHHHHHHHCCee
Confidence 77899999999999986
No 123
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=53.22 E-value=0.92 Score=42.01 Aligned_cols=44 Identities=5% Similarity=-0.006 Sum_probs=30.1
Q ss_pred cccccccccCchhhhh--------hhccCCCCCCCC----ccceeehhhhhhhhcccc
Q psy9025 314 RSASADTYFHPKQQRR--------LLHQTPTGHNNS----FECQVTVHREDIHESHIT 359 (361)
Q Consensus 314 ~t~~d~~~~~~l~~~~--------~~~~~~~~~~~~----~~a~v~~a~~~lH~~~i~ 359 (361)
..+.+...+|+.++.| +..... +++. ++..++.|++|||++||+
T Consensus 68 ~~~~~~~~~~lv~E~~~~g~L~~~~~~~~~--~~~~~~~~~~~qi~~aL~~LH~~~iv 123 (323)
T cd05616 68 SCFQTMDRLYFVMEYVNGGDLMYQIQQVGR--FKEPHAVFYAAEIAIGLFFLHSKGII 123 (323)
T ss_pred EEEecCCEEEEEEcCCCCCCHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCEE
Confidence 3556666777777765 122122 4554 288899999999999986
No 124
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=52.90 E-value=1.8 Score=39.27 Aligned_cols=60 Identities=10% Similarity=0.021 Sum_probs=35.9
Q ss_pred cCcccccCcccc----cccccccccccCchhhhh------hh-ccCCCCCCCC----ccceeehhhhhhhhcccc
Q psy9025 300 GSKSLNKRPHRR----VNRSASADTYFHPKQQRR------LL-HQTPTGHNNS----FECQVTVHREDIHESHIT 359 (361)
Q Consensus 300 ~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~------~~-~~~~~~~~~~----~~a~v~~a~~~lH~~~i~ 359 (361)
.|-.+++.++++ +...+.++.+.|+.++.+ .+ .......++. ++..++.|++|||++||+
T Consensus 50 ~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~ 124 (294)
T PLN00009 50 REISLLKEMQHGNIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVL 124 (294)
T ss_pred HHHHHHHhccCCCEeeEEEEEecCCeEEEEEecccccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 455566666655 344666666666666655 11 2111112332 267899999999999986
No 125
>KOG1345|consensus
Probab=52.81 E-value=3.4 Score=37.32 Aligned_cols=46 Identities=11% Similarity=0.026 Sum_probs=31.5
Q ss_pred ccccccccCchhhhhh-----hccCCCCCCCCc----cceeehhhhhhhhccccC
Q psy9025 315 SASADTYFHPKQQRRL-----LHQTPTGHNNSF----ECQVTVHREDIHESHITS 360 (361)
Q Consensus 315 t~~d~~~~~~l~~~~~-----~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~~ 360 (361)
.|+.+.+-.+.+|.|. .+-++.|+-|.+ +|++..|++|||+++|+-
T Consensus 90 aFqt~d~YvF~qE~aP~gdL~snv~~~GigE~~~K~v~~ql~SAi~fMHsknlVH 144 (378)
T KOG1345|consen 90 AFQTSDAYVFVQEFAPRGDLRSNVEAAGIGEANTKKVFAQLLSAIEFMHSKNLVH 144 (378)
T ss_pred HhhcCceEEEeeccCccchhhhhcCcccccHHHHHHHHHHHHHHHHHhhccchhh
Confidence 3444444446667662 222346677776 899999999999999873
No 126
>PHA03212 serine/threonine kinase US3; Provisional
Probab=52.34 E-value=2 Score=41.24 Aligned_cols=17 Identities=29% Similarity=0.290 Sum_probs=15.7
Q ss_pred cceeehhhhhhhhcccc
Q psy9025 343 ECQVTVHREDIHESHIT 359 (361)
Q Consensus 343 ~a~v~~a~~~lH~~~i~ 359 (361)
...++.|+.|||++||+
T Consensus 188 ~~qi~~aL~ylH~~~Iv 204 (391)
T PHA03212 188 ERSVLRAIQYLHENRII 204 (391)
T ss_pred HHHHHHHHHHHHhCCcc
Confidence 77899999999999997
No 127
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=51.99 E-value=2.2 Score=38.03 Aligned_cols=45 Identities=4% Similarity=-0.122 Sum_probs=28.7
Q ss_pred ccccccccCchhhhh-------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 315 SASADTYFHPKQQRR-------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 315 t~~d~~~~~~l~~~~-------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
.+.++..+++.++.+ ++......+.+.. +.+++.|++|||++||+
T Consensus 74 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~ii 129 (266)
T cd05064 74 VITRGNTMMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYV 129 (266)
T ss_pred EEecCCCcEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEe
Confidence 445556677777655 2321111144442 78899999999999986
No 128
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=51.38 E-value=2 Score=38.61 Aligned_cols=60 Identities=10% Similarity=-0.002 Sum_probs=35.5
Q ss_pred ccCcccccCcccc----cccccccccccCchhhhh-------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
..|..++..+.++ +...+.+....++.++.| +.+ .+.++++.. ...++.|+.|||+.||+
T Consensus 48 ~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~-~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~ 122 (288)
T cd07833 48 LREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEYVERTLLELLEA-SPGGLPPDAVRSYIWQLLQAIAYCHSHNII 122 (288)
T ss_pred HHHHHHHHhcCCCCeeehhheEEECCEEEEEEecCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 4455555555444 233445556666666555 122 222244442 77899999999999986
No 129
>PF12973 Cupin_7: ChrR Cupin-like domain; PDB: 3O14_B 2Z2S_F 2Q1Z_B 3EBR_A.
Probab=50.82 E-value=95 Score=22.63 Aligned_cols=63 Identities=17% Similarity=0.167 Sum_probs=41.8
Q ss_pred cceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEEeCcEEEEEeCCCCeechhhhhcccCCCceeeEEEecceEEEEE
Q psy9025 139 LRPVLYLPGDYICRKGEVGKEMYIVKTGQVQVVSGETVLATLTEGSVFGEISLLALAGTNRRTADVRSHGFSNLFV 214 (361)
Q Consensus 139 l~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~~~~~~~~l~~Gd~fGe~~ll~~~~~~~~~~~v~A~~~~~~~~ 214 (361)
.....+.||..+-.-.-.+....||++|.+..-. ..+.+||++=. ..-...+..+.+.|.||+
T Consensus 26 ~~L~r~~pG~~~p~H~H~g~ee~~VLeG~~~d~~-----~~~~~G~~~~~--------p~g~~h~~~s~~gc~~~v 88 (91)
T PF12973_consen 26 VSLLRLEPGASLPRHRHPGGEEILVLEGELSDGD-----GRYGAGDWLRL--------PPGSSHTPRSDEGCLILV 88 (91)
T ss_dssp EEEEEE-TTEEEEEEEESS-EEEEEEECEEEETT-----CEEETTEEEEE---------TTEEEEEEESSCEEEEE
T ss_pred EEEEEECCCCCcCccCCCCcEEEEEEEEEEEECC-----ccCCCCeEEEe--------CCCCccccCcCCCEEEEE
Confidence 4567788998887766777888899999987522 13467766522 233455667888898886
No 130
>COG0662 {ManC} Mannose-6-phosphate isomerase [Carbohydrate transport and metabolism]
Probab=50.58 E-value=59 Score=25.57 Aligned_cols=47 Identities=21% Similarity=0.313 Sum_probs=32.2
Q ss_pred cceEEeCCCCEE-EeCCCCCCeEEEEEeeEEEEEeCcEEEEEeCCCCee
Q psy9025 139 LRPVLYLPGDYI-CRKGEVGKEMYIVKTGQVQVVSGETVLATLTEGSVF 186 (361)
Q Consensus 139 l~~~~~~~ge~I-~~~G~~~~~ly~I~~G~v~v~~~~~~~~~l~~Gd~f 186 (361)
.....+.+|+-+ ..--...+.+|+|++|...+.-++. ...+++||.+
T Consensus 38 ~~~~~v~pg~~~~~~~H~~~dE~~~Vl~G~g~v~~~~~-~~~v~~gd~~ 85 (127)
T COG0662 38 IARILVKPGEEISLHHHHHRDEHWYVLEGTGKVTIGGE-EVEVKAGDSV 85 (127)
T ss_pred EEEEEECCCcccCcccccCcceEEEEEeeEEEEEECCE-EEEecCCCEE
Confidence 556667777775 3433446899999999999984432 3456777755
No 131
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=50.47 E-value=2.3 Score=39.46 Aligned_cols=44 Identities=11% Similarity=0.138 Sum_probs=29.2
Q ss_pred cccccccccCchhhhh--------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 314 RSASADTYFHPKQQRR--------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 314 ~t~~d~~~~~~l~~~~--------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
..+.+..++++.++.| +..+.. +++.. ...++.|+.|||++||+
T Consensus 72 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~--~~~~~~~~~~~qi~~~l~~lH~~~iv 127 (332)
T cd05614 72 YAFQTEAKLHLILDYVSGGEMFTHLYQRDN--FSEDEVRFYSGEIILALEHLHKLGIV 127 (332)
T ss_pred EEEecCCEEEEEEeCCCCCcHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCcE
Confidence 3555666677777666 122122 45442 67899999999999986
No 132
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=50.00 E-value=2.7 Score=36.96 Aligned_cols=59 Identities=7% Similarity=-0.041 Sum_probs=34.4
Q ss_pred CcccccCcccc----cccccccccccCchhhhh-------hhccCCCCCCCC----ccceeehhhhhhhhcccc
Q psy9025 301 SKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQTPTGHNNS----FECQVTVHREDIHESHIT 359 (361)
Q Consensus 301 ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~~~~~~~~~----~~a~v~~a~~~lH~~~i~ 359 (361)
|..++..++++ +...+.+..+.++.++.+ .++.....+++. ....++.|+.|||++||+
T Consensus 43 e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~ 116 (252)
T cd05084 43 EARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCI 116 (252)
T ss_pred HHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 44444444444 223455566667776655 232111114443 278899999999999986
No 133
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=49.92 E-value=1.1 Score=39.30 Aligned_cols=60 Identities=8% Similarity=0.072 Sum_probs=38.2
Q ss_pred ccCcccccCcccc----cccccccccccCchhhhh-------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
..|..++..++++ +...+.+..+.|+.++.+ .+... ..+++.. ..+++.|+.|||++||+
T Consensus 41 ~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lh~~~~~ 115 (250)
T cd05123 41 LTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGELFSHLSKE-GRFSEERARFYAAEIVLALEYLHSLGII 115 (250)
T ss_pred HHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCce
Confidence 4455566665555 344666777777777655 22211 1144442 77899999999999986
No 134
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=49.80 E-value=2.6 Score=38.98 Aligned_cols=48 Identities=10% Similarity=0.071 Sum_probs=29.7
Q ss_pred cccccccccccCchhhhh-------hhc-cCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 312 VNRSASADTYFHPKQQRR-------LLH-QTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 312 ~~~t~~d~~~~~~l~~~~-------~~~-~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
++..+.++.+.+++++.+ ++. ....++++.. +.+++.|++|||++||+
T Consensus 64 ~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~iv 123 (328)
T cd08226 64 SWTVFTTGSWLWVISPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYI 123 (328)
T ss_pred EeeeEecCCceEEEEecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 344566666666665543 222 1122244442 77889999999999986
No 135
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=49.80 E-value=2.6 Score=37.39 Aligned_cols=60 Identities=12% Similarity=-0.007 Sum_probs=35.3
Q ss_pred CcccccCcccc----cccccccccccCchhhhh-------hhccCCCCCCCCc----cceeehhhhhhhhccccC
Q psy9025 301 SKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQTPTGHNNSF----ECQVTVHREDIHESHITS 360 (361)
Q Consensus 301 ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~~ 360 (361)
|-.+++.+.++ ++..+.+....++.++.| +++.....+++.. +.+++.|+.|||++||+-
T Consensus 49 e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH 123 (258)
T cd05078 49 AASMMSQLSHKHLVLNYGVCVCGDESIMVQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTH 123 (258)
T ss_pred HHHHHHhCCCCChhheeeEEEeCCCcEEEEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 44445555444 333455555666677655 2321111244443 678899999999999973
No 136
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=49.78 E-value=3.4 Score=36.78 Aligned_cols=17 Identities=6% Similarity=0.098 Sum_probs=15.9
Q ss_pred cceeehhhhhhhhcccc
Q psy9025 343 ECQVTVHREDIHESHIT 359 (361)
Q Consensus 343 ~a~v~~a~~~lH~~~i~ 359 (361)
+..++.|+.|||++||+
T Consensus 111 ~~qi~~~l~~lH~~~iv 127 (262)
T cd05077 111 AKQLASALSYLEDKDLV 127 (262)
T ss_pred HHHHHHHHHHhhhCCeE
Confidence 88999999999999986
No 137
>PRK11171 hypothetical protein; Provisional
Probab=48.96 E-value=1e+02 Score=27.82 Aligned_cols=71 Identities=13% Similarity=0.023 Sum_probs=44.2
Q ss_pred cceEEeCCCCEEEeCCC--CCCeEEEEEeeEEEEEeCcEEEEEeCCCCeechhhhhcccCCCceeeEEEecceEEEEEEe
Q psy9025 139 LRPVLYLPGDYICRKGE--VGKEMYIVKTGQVQVVSGETVLATLTEGSVFGEISLLALAGTNRRTADVRSHGFSNLFVLN 216 (361)
Q Consensus 139 l~~~~~~~ge~I~~~G~--~~~~ly~I~~G~v~v~~~~~~~~~l~~Gd~fGe~~ll~~~~~~~~~~~v~A~~~~~~~~l~ 216 (361)
+....+.||...-.... ..+.+++|++|.+.+.-++. ...|.+||++=..+ +.+........+++.++.+.
T Consensus 63 ~~~~~l~PG~~~~~~~h~~~~eE~~~VlsG~l~v~~~g~-~~~L~~GDsi~~p~------~~~H~~~N~g~~~a~~l~v~ 135 (266)
T PRK11171 63 QYLVEVEPGGGSDQPEPDEGAETFLFVVEGEITLTLEGK-THALSEGGYAYLPP------GSDWTLRNAGAEDARFHWIR 135 (266)
T ss_pred EEEEEECCCCcCCCCCCCCCceEEEEEEeCEEEEEECCE-EEEECCCCEEEECC------CCCEEEEECCCCCEEEEEEE
Confidence 34566778775433322 23689999999999985443 47899999773322 34444433344567766653
No 138
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=48.84 E-value=2.6 Score=39.61 Aligned_cols=59 Identities=10% Similarity=0.003 Sum_probs=36.1
Q ss_pred cCcccccCcccc----cccccccccccCchhhhhh---hccCCCCCCCC----ccceeehhhhhhhhcccc
Q psy9025 300 GSKSLNKRPHRR----VNRSASADTYFHPKQQRRL---LHQTPTGHNNS----FECQVTVHREDIHESHIT 359 (361)
Q Consensus 300 ~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~~---~~~~~~~~~~~----~~a~v~~a~~~lH~~~i~ 359 (361)
.|-.++..++++ +...+.+...+|++++.|- +.... ...+. ++..++.|++|||+.||+
T Consensus 121 ~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~iv 190 (353)
T PLN00034 121 REIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFMDGGSLEGTH-IADEQFLADVARQILSGIAYLHRRHIV 190 (353)
T ss_pred HHHHHHHhCCCCCcceeeeEeccCCeEEEEEecCCCCcccccc-cCCHHHHHHHHHHHHHHHHHHHHCCEe
Confidence 344455555554 3345666777777877662 22111 12332 277899999999999986
No 139
>TIGR03214 ura-cupin putative allantoin catabolism protein. This model represents a protein containing a tandem arrangement of cupin domains (N-terminal part of pfam07883 and C-terminal more distantly related to pfam00190). This protein is found in the vicinity of genes involved in the catabolism of allantoin, a breakdown product of urate and sometimes of urate iteslf. The distribution of pathway components in the genomes in which this family is observed suggests that the function is linked to the allantoate catabolism to glyoxylate pathway (GenProp0686) since it is sometimes found in genomes lacking any elements of the xanthine-to-allantoin pathways (e.g. in Enterococcus faecalis).
Probab=48.27 E-value=1.1e+02 Score=27.52 Aligned_cols=70 Identities=20% Similarity=0.174 Sum_probs=42.1
Q ss_pred ceEEeCCCCEEEe-CCCCC-CeEEEEEeeEEEEEeCcEEEEEeCCCCeechhhhhcccCCCceeeEEEecceEEEEEEe
Q psy9025 140 RPVLYLPGDYICR-KGEVG-KEMYIVKTGQVQVVSGETVLATLTEGSVFGEISLLALAGTNRRTADVRSHGFSNLFVLN 216 (361)
Q Consensus 140 ~~~~~~~ge~I~~-~G~~~-~~ly~I~~G~v~v~~~~~~~~~l~~Gd~fGe~~ll~~~~~~~~~~~v~A~~~~~~~~l~ 216 (361)
....+.||.-.-. ....+ +.+.+|++|.+.+.-++.. ..|.+||++=..+ +.+....-...+++.++.+.
T Consensus 61 ~~v~l~pgg~~~~~~~~~g~ee~iyVl~G~l~v~~~g~~-~~L~~Gd~~y~pa------~~~H~~~N~~~~~a~~l~v~ 132 (260)
T TIGR03214 61 YIVEVHPGGGNTTGFGGEGIETFLFVISGEVNVTAEGET-HELREGGYAYLPP------GSKWTLANAQAEDARFFLYK 132 (260)
T ss_pred EEEEECCCCcCCCCCCCCceEEEEEEEeCEEEEEECCEE-EEECCCCEEEECC------CCCEEEEECCCCCEEEEEEE
Confidence 3555667653311 12333 6899999999999854443 5899999874332 33433333344567766654
No 140
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=48.04 E-value=3 Score=38.68 Aligned_cols=57 Identities=5% Similarity=-0.034 Sum_probs=34.0
Q ss_pred CcccccCcccc----cccccccccccCchhhhh------hhc-cCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 301 SKSLNKRPHRR----VNRSASADTYFHPKQQRR------LLH-QTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 301 ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~------~~~-~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
|-.++..++++ +...+.+..+.++.++.+ .+. ... +++.. +..++.|++|||+.||+
T Consensus 70 E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~--~~~~~~~~~~~ql~~aL~~LH~~~i~ 141 (335)
T PTZ00024 70 ELKIMNEIKHENIMGLVDVYVEGDFINLVMDIMASDLKKVVDRKIR--LTESQVKCILLQILNGLNVLHKWYFM 141 (335)
T ss_pred HHHHHHhCCCcceeeeeEEEecCCcEEEEEeccccCHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 33444444444 233455556666666655 122 112 44442 88899999999999986
No 141
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=47.71 E-value=2.8 Score=37.64 Aligned_cols=59 Identities=5% Similarity=-0.046 Sum_probs=35.6
Q ss_pred CcccccCcccc----cccccccccccCchhhhh-------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 301 SKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 301 ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
|-.++..++++ +...+.+..++|+.++.| ++++....+++.- +..++.|+.|||++||+
T Consensus 52 e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~ 125 (280)
T cd06611 52 EIDILSECKHPNIVGLYEAYFYENKLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVI 125 (280)
T ss_pred HHHHHHhCCCCceeEEEEEEecCCeEEEEeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 33444445544 233455566667676655 2222222255553 88899999999999986
No 142
>KOG0984|consensus
Probab=47.59 E-value=4 Score=35.45 Aligned_cols=75 Identities=9% Similarity=-0.058 Sum_probs=41.8
Q ss_pred CcchhHHHhhcccCcccchhhhccCcccccC-cccc----cccccccccccCchhhhh-----------hhccCCCCCCC
Q psy9025 277 PKLLPIVMQVVPQNSMASKLLRCGSKSLNKR-PHRR----VNRSASADTYFHPKQQRR-----------LLHQTPTGHNN 340 (361)
Q Consensus 277 ~~~l~~~~~~i~~~~~~~~vl~~~ek~i~~~-~~~~----~~~t~~d~~~~~~l~~~~-----------~~~~~~~~~~~ 340 (361)
..+.|++...+.++.| ... ..|-|+-++ ..+| .+..+.+.-.+.+-||.. +.++.- .+|
T Consensus 73 imAvKri~~tvn~q~q-~r~--L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~M~tSldkfy~~v~~~g~~--ipE 147 (282)
T KOG0984|consen 73 IMAVKRIRATVNSQEQ-KRL--LMDLDIIMRTVDCPFTVHFYGALFREGDVWICMELMDTSLDKFYRKVLKKGGT--IPE 147 (282)
T ss_pred EEEEeeehhhcChHHH-HHH--HHhhhhhccCCCCCeEEEeehhhhccccEEEeHHHhhhhHHHHHHHHHhcCCc--Cch
Confidence 4445555555554332 233 356666666 3445 233334443344444322 233222 788
Q ss_pred Cc----cceeehhhhhhhhc
Q psy9025 341 SF----ECQVTVHREDIHES 356 (361)
Q Consensus 341 ~~----~a~v~~a~~~lH~~ 356 (361)
+. |.+|+.|++|||++
T Consensus 148 ~vlGkIa~Svv~al~~L~~k 167 (282)
T KOG0984|consen 148 DVLGKIAVSVVHALEFLHSK 167 (282)
T ss_pred HHhhHhHHHHHHHHHHHHHH
Confidence 86 89999999999986
No 143
>KOG0597|consensus
Probab=46.49 E-value=2.8 Score=41.64 Aligned_cols=59 Identities=7% Similarity=-0.042 Sum_probs=40.6
Q ss_pred ccCcccccCcccc----cccccccccccCchhhhh-------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
+.|-+|+.++.++ ....|-.+..+....+.| +-. +..++|.- ++.+|.|+.|||+.+|+
T Consensus 49 ~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte~a~g~L~~il~~--d~~lpEe~v~~~a~~LVsaL~yLhs~ril 122 (808)
T KOG0597|consen 49 RQEVRILRSLKHPNIVEMLESFETSAHLWVVTEYAVGDLFTILEQ--DGKLPEEQVRAIAYDLVSALYYLHSNRIL 122 (808)
T ss_pred HHHHHHHHhcCCcchhhHHHhhcccceEEEEehhhhhhHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 4556666667776 344555566565555555 333 33388874 99999999999999997
No 144
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=46.03 E-value=2.1 Score=39.11 Aligned_cols=60 Identities=7% Similarity=-0.019 Sum_probs=35.1
Q ss_pred cCcccccCcccc----cccccccc--cccCchhhhh------hhc--cCC-C-CCCCC----ccceeehhhhhhhhcccc
Q psy9025 300 GSKSLNKRPHRR----VNRSASAD--TYFHPKQQRR------LLH--QTP-T-GHNNS----FECQVTVHREDIHESHIT 359 (361)
Q Consensus 300 ~ek~i~~~~~~~----~~~t~~d~--~~~~~l~~~~------~~~--~~~-~-~~~~~----~~a~v~~a~~~lH~~~i~ 359 (361)
.|..++..++++ +...+.+. .++++.++.| .+. ... . .+.+. ++++++.|+.|||++||+
T Consensus 51 ~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~ 130 (316)
T cd07842 51 REIALLRELKHENVVSLVEVFLEHADKSVYLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVL 130 (316)
T ss_pred HHHHHHHhcCCCCccceEEEEeCCCCceEEEEEeCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEe
Confidence 344455555555 33455555 6677776655 111 011 0 13333 278999999999999986
No 145
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=45.94 E-value=2.7 Score=38.44 Aligned_cols=17 Identities=12% Similarity=0.008 Sum_probs=15.5
Q ss_pred cceeehhhhhhhhcccc
Q psy9025 343 ECQVTVHREDIHESHIT 359 (361)
Q Consensus 343 ~a~v~~a~~~lH~~~i~ 359 (361)
+..++.|+.|||++||+
T Consensus 110 ~~qi~~aL~~lH~~~iv 126 (309)
T cd07872 110 LYQILRGLAYCHRRKVL 126 (309)
T ss_pred HHHHHHHHHHHHHCCee
Confidence 66899999999999986
No 146
>PRK09943 DNA-binding transcriptional repressor PuuR; Provisional
Probab=45.87 E-value=87 Score=26.35 Aligned_cols=66 Identities=17% Similarity=0.202 Sum_probs=39.9
Q ss_pred EeCCCCEEEe-CCCCCCeEEEEEeeEEEEEeCcEEEEEeCCCCeechhhhhcccCCCceeeEEEecceEEEEEE
Q psy9025 143 LYLPGDYICR-KGEVGKEMYIVKTGQVQVVSGETVLATLTEGSVFGEISLLALAGTNRRTADVRSHGFSNLFVL 215 (361)
Q Consensus 143 ~~~~ge~I~~-~G~~~~~ly~I~~G~v~v~~~~~~~~~l~~Gd~fGe~~ll~~~~~~~~~~~v~A~~~~~~~~l 215 (361)
.+.||...-. --.++..+++|++|.+.+.-++. ...+.+||.+=..+ +.+........+++.++.+
T Consensus 113 ~~~pg~~~~~~~~h~~~E~~~Vl~G~~~~~~~~~-~~~l~~Gd~~~~~~------~~~H~~~n~~~~~~~~l~~ 179 (185)
T PRK09943 113 TYQPGTTTGERIKHQGEEIGTVLEGEIVLTINGQ-DYHLVAGQSYAINT------GIPHSFSNTSAGICRIISA 179 (185)
T ss_pred EccCCCCcccccccCCcEEEEEEEeEEEEEECCE-EEEecCCCEEEEcC------CCCeeeeCCCCCCeEEEEE
Confidence 4566663221 11345789999999999985443 35799999774332 3444444444455666655
No 147
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=45.57 E-value=1.6 Score=39.54 Aligned_cols=40 Identities=13% Similarity=0.001 Sum_probs=26.0
Q ss_pred cccCchhhhh------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 320 TYFHPKQQRR------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 320 ~~~~~l~~~~------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
.+.|+.++.| ++......+++.. +..++.|+.|||+.||+
T Consensus 79 ~~~~lv~e~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~ 128 (293)
T cd07843 79 DKIYMVMEYVEHDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWIL 128 (293)
T ss_pred CcEEEEehhcCcCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 5666676655 2221122244442 78899999999999986
No 148
>KOG0581|consensus
Probab=45.03 E-value=1.8 Score=40.32 Aligned_cols=65 Identities=6% Similarity=-0.067 Sum_probs=47.0
Q ss_pred cchhhhccCcccccCcccc----cccccccccc-cCchhhhh------hhccCCCCCCCCc----cceeehhhhhhhh-c
Q psy9025 293 ASKLLRCGSKSLNKRPHRR----VNRSASADTY-FHPKQQRR------LLHQTPTGHNNSF----ECQVTVHREDIHE-S 356 (361)
Q Consensus 293 ~~~vl~~~ek~i~~~~~~~----~~~t~~d~~~-~~~l~~~~------~~~~~~~~~~~~~----~a~v~~a~~~lH~-~ 356 (361)
..++ ..|-.|+.+|+++ .|..|-+..- +++.||.+ .+.+....++|.. +=.|+.++.|||+ +
T Consensus 121 ~~Qi--~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEYMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~ 198 (364)
T KOG0581|consen 121 QKQI--LRELEILRSCQSPYIVGFYGAFYSNGEEISICMEYMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEER 198 (364)
T ss_pred HHHH--HHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhhcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcc
Confidence 4445 5677888888888 4668877774 88898877 1221222278886 7889999999995 9
Q ss_pred ccc
Q psy9025 357 HIT 359 (361)
Q Consensus 357 ~i~ 359 (361)
+||
T Consensus 199 ~II 201 (364)
T KOG0581|consen 199 KII 201 (364)
T ss_pred Cee
Confidence 987
No 149
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=44.91 E-value=2.3 Score=38.18 Aligned_cols=60 Identities=15% Similarity=0.014 Sum_probs=36.9
Q ss_pred ccCcccccCcccc----cccccccccccCchhhhh-------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
..|-.++..++++ +...+.+..+.|++++.+ +.+ ...++++.- +..++.|+.|||+.||+
T Consensus 48 ~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~-~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~ 122 (286)
T cd07846 48 MREIRMLKQLRHENLVNLIEVFRRKKRLYLVFEFVDHTVLDDLEK-YPNGLDESRVRKYLFQILRGIEFCHSHNII 122 (286)
T ss_pred HHHHHHHHhcCCcchhhHHHhcccCCeEEEEEecCCccHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 3455555555555 344666677777777655 111 111233332 67899999999999986
No 150
>KOG0600|consensus
Probab=44.67 E-value=5.5 Score=38.95 Aligned_cols=45 Identities=11% Similarity=0.007 Sum_probs=28.3
Q ss_pred ccccccccCchhhhh------hhccCCCCCCCC----ccceeehhhhhhhhcccc
Q psy9025 315 SASADTYFHPKQQRR------LLHQTPTGHNNS----FECQVTVHREDIHESHIT 359 (361)
Q Consensus 315 t~~d~~~~~~l~~~~------~~~~~~~~~~~~----~~a~v~~a~~~lH~~~i~ 359 (361)
|-+++..+||..+-. ++....-.|.|+ |--+++.+++|+|++||+
T Consensus 186 t~~~~~siYlVFeYMdhDL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvl 240 (560)
T KOG0600|consen 186 TSKLSGSIYLVFEYMDHDLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRGVL 240 (560)
T ss_pred EecCCceEEEEEecccchhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcCee
Confidence 444566677765433 344222124444 256789999999999997
No 151
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=44.51 E-value=3.7 Score=36.33 Aligned_cols=59 Identities=5% Similarity=-0.067 Sum_probs=34.4
Q ss_pred CcccccCcccc----cccccccccccCchhhhh-------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 301 SKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 301 ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
|-.++..++++ ++..+.+..+++++++.| .++.....+++.. +..++.|+.|||++||+
T Consensus 49 e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~ 122 (256)
T cd05113 49 EAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFI 122 (256)
T ss_pred HHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 43444444444 233445555666666654 2221111244442 88899999999999986
No 152
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=44.40 E-value=1.4 Score=45.50 Aligned_cols=60 Identities=12% Similarity=0.038 Sum_probs=37.4
Q ss_pred ccCcccccCcccc----cccccccccccCchhhhh-------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
..|..++..++++ ++..+.+..++|+.++.| +++. ...+++.. +..++.|++|||++||+
T Consensus 52 ~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVmEy~~g~~L~~li~~-~~~l~~~~~~~i~~qil~aL~yLH~~gIi 126 (669)
T cd05610 52 QAERDALALSKSPFIVHLYYSLQSANNVYLVMEYLIGGDVKSLLHI-YGYFDEEMAVKYISEVALALDYLHRHGII 126 (669)
T ss_pred HHHHHHHHhcCCCCcCeEEEEEEECCEEEEEEeCCCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCEE
Confidence 4455555555555 334556666777777755 2221 11144442 77899999999999987
No 153
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=43.73 E-value=2.9 Score=38.56 Aligned_cols=45 Identities=4% Similarity=0.019 Sum_probs=29.1
Q ss_pred cccccccccCchhhhh-------hhccCCCCCCCC----ccceeehhhhhhhhcccc
Q psy9025 314 RSASADTYFHPKQQRR-------LLHQTPTGHNNS----FECQVTVHREDIHESHIT 359 (361)
Q Consensus 314 ~t~~d~~~~~~l~~~~-------~~~~~~~~~~~~----~~a~v~~a~~~lH~~~i~ 359 (361)
..+.+..++|+.++.| .+.. ...+++. ++..++.|++|||++||+
T Consensus 63 ~~~~~~~~~~lv~ey~~~g~L~~~l~~-~~~~~~~~~~~~~~qi~~al~~LH~~~iv 118 (316)
T cd05619 63 CTFQTKENLFFVMEYLNGGDLMFHIQS-CHKFDLPRATFYAAEIICGLQFLHSKGIV 118 (316)
T ss_pred EEEEeCCEEEEEEeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhCCeE
Confidence 3555666677777655 1221 1114443 288899999999999986
No 154
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=43.28 E-value=3.3 Score=37.68 Aligned_cols=59 Identities=12% Similarity=-0.015 Sum_probs=33.8
Q ss_pred CcccccCcccc----cccccccccccCchhhhh------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 301 SKSLNKRPHRR----VNRSASADTYFHPKQQRR------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 301 ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
|..++..++++ +...+.+..++|+.++.| .+.+....+++.. +..++.|++|||+.||+
T Consensus 54 E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~ 126 (301)
T cd07873 54 EVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVL 126 (301)
T ss_pred HHHHHHhcCCCCcceEEEEEecCCeEEEEEeccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 44444444444 333455555666666654 1221111244432 67899999999999986
No 155
>KOG4236|consensus
Probab=42.55 E-value=4.1 Score=40.16 Aligned_cols=68 Identities=15% Similarity=0.103 Sum_probs=43.2
Q ss_pred CcccchhhhccCcccccCcccc--cc--cccccccccCchhhhh-------hhccCCCCCCCCc----cceeehhhhhhh
Q psy9025 290 NSMASKLLRCGSKSLNKRPHRR--VN--RSASADTYFHPKQQRR-------LLHQTPTGHNNSF----ECQVTVHREDIH 354 (361)
Q Consensus 290 ~~~~~~vl~~~ek~i~~~~~~~--~~--~t~~d~~~~~~l~~~~-------~~~~~~~~~~~~~----~a~v~~a~~~lH 354 (361)
..+++++ ++|-.|+..+++| |+ .+|---.-+...||.- +|..+...++|-. .++++.|+.|||
T Consensus 604 ~kqesql--R~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH 681 (888)
T KOG4236|consen 604 TKQESQL--RNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHGDMLEMILSSEKGRLPERITKFLVTQILVALRYLH 681 (888)
T ss_pred CchHHHH--HHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhh
Confidence 4556777 8999999998888 33 2222222222333332 4442222277663 999999999999
Q ss_pred hcccc
Q psy9025 355 ESHIT 359 (361)
Q Consensus 355 ~~~i~ 359 (361)
-+||+
T Consensus 682 ~knIv 686 (888)
T KOG4236|consen 682 FKNIV 686 (888)
T ss_pred hccee
Confidence 99997
No 156
>KOG0583|consensus
Probab=42.26 E-value=3.9 Score=38.96 Aligned_cols=58 Identities=10% Similarity=0.021 Sum_probs=38.4
Q ss_pred CcccccCcc-cc----cccccccccccCchhhhh--------hhccCCCCCCCC----ccceeehhhhhhhhccccC
Q psy9025 301 SKSLNKRPH-RR----VNRSASADTYFHPKQQRR--------LLHQTPTGHNNS----FECQVTVHREDIHESHITS 360 (361)
Q Consensus 301 ek~i~~~~~-~~----~~~t~~d~~~~~~l~~~~--------~~~~~~~~~~~~----~~a~v~~a~~~lH~~~i~~ 360 (361)
|-.++..++ +| ++.-+...+.+|+.||.| +.+..+ +.|. +--+++.|.+|+|++||+-
T Consensus 69 Ei~~~~~~~~HpnI~~l~ev~~t~~~~~ivmEy~~gGdL~~~i~~~g~--l~E~~ar~~F~Qlisav~y~H~~gi~H 143 (370)
T KOG0583|consen 69 EISILRRLRSHPNIIRLLEVFATPTKIYIVMEYCSGGDLFDYIVNKGR--LKEDEARKYFRQLISAVAYCHSRGIVH 143 (370)
T ss_pred HHHHHHHhccCCCEeEEEEEEecCCeEEEEEEecCCccHHHHHHHcCC--CChHHHHHHHHHHHHHHHHHHhCCEee
Confidence 335555555 54 444455555688888888 233234 6664 2678999999999999973
No 157
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=41.96 E-value=2.6 Score=37.87 Aligned_cols=60 Identities=12% Similarity=-0.008 Sum_probs=35.5
Q ss_pred cCcccccCcccc----cccccccccccCchhhhh------hhccCCC--CCCCCc----cceeehhhhhhhhcccc
Q psy9025 300 GSKSLNKRPHRR----VNRSASADTYFHPKQQRR------LLHQTPT--GHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 300 ~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~------~~~~~~~--~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
.|-.++..++++ +...+.++.+.|+.++.| .+...+. .+++.. ...++.|+.|||+.||+
T Consensus 48 ~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~ 123 (285)
T cd07861 48 REISLLKELQHPNIVCLQDVLMQESRLYLIFEFLSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVL 123 (285)
T ss_pred HHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEecCCCCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 344455555555 334555666677776655 1221111 134432 78899999999999986
No 158
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=41.82 E-value=3.8 Score=36.17 Aligned_cols=59 Identities=7% Similarity=-0.032 Sum_probs=33.6
Q ss_pred CcccccCcccc----cccccccccccCchhhhh-------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 301 SKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 301 ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
|-.++..++++ ++..+.+....++.++.| .++.....+++.. ...++.|++|||++||+
T Consensus 49 e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~ 122 (256)
T cd05114 49 EAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFI 122 (256)
T ss_pred HHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 44455555554 223444555566666544 2221111144442 77899999999999986
No 159
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=41.45 E-value=4 Score=36.41 Aligned_cols=59 Identities=5% Similarity=0.019 Sum_probs=35.0
Q ss_pred CcccccCcccc----cccccccccccCchhhhh-------hhccCC--------CCCCCCc----cceeehhhhhhhhcc
Q psy9025 301 SKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQTP--------TGHNNSF----ECQVTVHREDIHESH 357 (361)
Q Consensus 301 ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~~~--------~~~~~~~----~a~v~~a~~~lH~~~ 357 (361)
|-.++..+.++ +...+.+..+.++.++.| +++... ..+.+.. ...++.|+.|||+.|
T Consensus 58 E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~ 137 (275)
T cd05046 58 ELDMFRKLSHKNVVRLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNAR 137 (275)
T ss_pred HHHHHHhcCCcceeeeEEEECCCCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcC
Confidence 44444444444 344566667777777665 222111 0133332 788999999999999
Q ss_pred cc
Q psy9025 358 IT 359 (361)
Q Consensus 358 i~ 359 (361)
|+
T Consensus 138 i~ 139 (275)
T cd05046 138 FV 139 (275)
T ss_pred cc
Confidence 86
No 160
>KOG0603|consensus
Probab=41.42 E-value=7 Score=39.17 Aligned_cols=48 Identities=10% Similarity=0.117 Sum_probs=32.5
Q ss_pred cccccccccccCchhhhh----hhccC---CCCCCCC--ccceeehhhhhhhhcccc
Q psy9025 312 VNRSASADTYFHPKQQRR----LLHQT---PTGHNNS--FECQVTVHREDIHESHIT 359 (361)
Q Consensus 312 ~~~t~~d~~~~~~l~~~~----~~~~~---~~~~~~~--~~a~v~~a~~~lH~~~i~ 359 (361)
+...+-|.+.+|..++.+ +++.. +.+..|- ++|.+|.|++|||++||+
T Consensus 381 ~~~v~~~~~~~~~v~e~l~g~ell~ri~~~~~~~~e~~~w~~~lv~Av~~LH~~gvv 437 (612)
T KOG0603|consen 381 SHDVYEDGKEIYLVMELLDGGELLRRIRSKPEFCSEASQWAAELVSAVDYLHEQGVV 437 (612)
T ss_pred ecceecCCceeeeeehhccccHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhcCee
Confidence 445777888888888766 22211 1111122 489999999999999997
No 161
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=40.75 E-value=2.1 Score=39.09 Aligned_cols=58 Identities=10% Similarity=-0.012 Sum_probs=35.1
Q ss_pred cCcccccCcccc----cccccccccccCchhhhh-------hh-ccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 300 GSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LL-HQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 300 ~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~-~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
.|..++..++++ ++..+..+.++++.++.+ .+ +..+ +++.. ...++.|+.|||++||+
T Consensus 50 ~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~--~~~~~~~~~~~~i~~~l~~lH~~~i~ 123 (305)
T cd05609 50 VERDILTFAENPFVVSMFCSFETKRHLCMVMEYVEGGDCATLLKNIGA--LPVDMARMYFAETVLALEYLHNYGIV 123 (305)
T ss_pred HHHHHHHhCCCCCeeeeEEEEecCCEEEEEEecCCCCcHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 455555555555 333555566666666544 22 2222 44442 67788999999999986
No 162
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=40.23 E-value=1.7 Score=39.85 Aligned_cols=60 Identities=17% Similarity=0.174 Sum_probs=36.6
Q ss_pred cCcccccCcccc----cccccccccccCchhhhh-------hhccCC-CCCCCCc----cceeehhhhhhhhcccc
Q psy9025 300 GSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQTP-TGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 300 ~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~~~-~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
.|..++..++++ +...+.++.++|+.++.| ++...+ ..+++.. +..++.|+.|||+.||+
T Consensus 50 ~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~ 125 (316)
T cd05574 50 TEQEILATLDHPFLPTLYASFQTETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIV 125 (316)
T ss_pred HHHHHHHhCCCCCchhheeeeecCCEEEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 344444444444 334566677777777765 233222 1255553 67899999999999985
No 163
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=39.94 E-value=2.3 Score=38.20 Aligned_cols=58 Identities=12% Similarity=0.027 Sum_probs=34.7
Q ss_pred CcccccCcccc----cccccccccccCchhhhh-------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 301 SKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 301 ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
|-.++..++++ +...+.+..++++.++.+ +.. ....+++.. +..++.++.|||+.||+
T Consensus 50 e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~-~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~ 122 (286)
T cd07847 50 EIRMLKQLKHPNLVNLIEVFRRKRKLHLVFEYCDHTVLNELEK-NPRGVPEHLIKKIIWQTLQAVNFCHKHNCI 122 (286)
T ss_pred HHHHHHhCCCCCEeeeeeEEeeCCEEEEEEeccCccHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Confidence 44444444444 333556666666666655 122 111244442 78899999999999986
No 164
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=39.87 E-value=3.5 Score=40.69 Aligned_cols=17 Identities=12% Similarity=0.339 Sum_probs=15.6
Q ss_pred cceeehhhhhhhhcccc
Q psy9025 343 ECQVTVHREDIHESHIT 359 (361)
Q Consensus 343 ~a~v~~a~~~lH~~~i~ 359 (361)
++.++.|++|||++||+
T Consensus 175 ~~qi~~aL~~lH~~~iv 191 (478)
T PTZ00267 175 FYQIVLALDEVHSRKMM 191 (478)
T ss_pred HHHHHHHHHHHHhCCEE
Confidence 77899999999999986
No 165
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=39.08 E-value=1.8 Score=38.10 Aligned_cols=59 Identities=10% Similarity=0.108 Sum_probs=34.1
Q ss_pred cCcccccCcccc----cccccccccccCchhhhh-------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 300 GSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 300 ~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
.|.+++.+++++ +...+.+....|+.++.+ ++.+.. .+++.. +.+++.|+.|||++||+
T Consensus 42 ~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~L~~lH~~~i~ 115 (265)
T cd05579 42 TERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDLASLLENVG-SLDEDVARIYIAEIVLALEYLHSNGII 115 (265)
T ss_pred HHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCee
Confidence 344455555444 233445556666666554 222111 144442 77899999999999986
No 166
>PRK04190 glucose-6-phosphate isomerase; Provisional
Probab=38.86 E-value=1.5e+02 Score=25.31 Aligned_cols=49 Identities=18% Similarity=0.231 Sum_probs=32.9
Q ss_pred cceEEeCCCCEE---------EeCCCCCCeEEEEEeeEEEEE-e---CcEEEEEeCCCCeec
Q psy9025 139 LRPVLYLPGDYI---------CRKGEVGKEMYIVKTGQVQVV-S---GETVLATLTEGSVFG 187 (361)
Q Consensus 139 l~~~~~~~ge~I---------~~~G~~~~~ly~I~~G~v~v~-~---~~~~~~~l~~Gd~fG 187 (361)
+-...+.||.+. +........+|+|++|...+. + ++.....+.+||++=
T Consensus 70 ~g~t~l~PG~~g~e~~mt~gH~H~~~~~~EiyyvlsG~g~~~l~~~~G~~~~~~v~pGd~v~ 131 (191)
T PRK04190 70 FGTTRLYPGKVGDEYFMTKGHFHAKADRAEIYYGLKGKGLMLLQDPEGEARWIEMEPGTVVY 131 (191)
T ss_pred EEEEEECCCcEecccccCCCeEcCCCCCCEEEEEEeCEEEEEEecCCCcEEEEEECCCCEEE
Confidence 345566777753 333333459999999998886 2 134567899999763
No 167
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=38.55 E-value=5.2 Score=35.77 Aligned_cols=43 Identities=14% Similarity=0.101 Sum_probs=28.2
Q ss_pred ccccccccCchhhhh-------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 315 SASADTYFHPKQQRR-------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 315 t~~d~~~~~~l~~~~-------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
.+.++...|..++.| .+...+ +.+.. +..++.|+.|||++||+
T Consensus 70 ~~~~~~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~i~~~l~~lH~~~iv 123 (277)
T cd06642 70 SYLKGTKLWIIMEYLGGGSALDLLKPGP--LEETYIATILREILKGLDYLHSERKI 123 (277)
T ss_pred ccccCCceEEEEEccCCCcHHHHhhcCC--CCHHHHHHHHHHHHHHHHHHhcCCee
Confidence 445555666666655 233222 44443 78899999999999986
No 168
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=38.18 E-value=2.1 Score=38.30 Aligned_cols=46 Identities=13% Similarity=-0.033 Sum_probs=28.6
Q ss_pred cccccccccCchhhhh------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 314 RSASADTYFHPKQQRR------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 314 ~t~~d~~~~~~l~~~~------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
..+.++..++++++.+ .+......+++.. +..++.|+.|||+.||+
T Consensus 65 ~~~~~~~~~~~v~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~ 120 (283)
T cd05118 65 DVFRHKGDLYLVFEFMDTDLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGIL 120 (283)
T ss_pred HhhccCCCEEEEEeccCCCHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 3455666666666655 2221111144442 78899999999999986
No 169
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=37.87 E-value=2.9 Score=37.45 Aligned_cols=60 Identities=12% Similarity=0.159 Sum_probs=35.4
Q ss_pred cCcccccCcccc----cccccccccccCchhhhh-------hhc-cCCCCCCCC----ccceeehhhhhhhhcccc
Q psy9025 300 GSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLH-QTPTGHNNS----FECQVTVHREDIHESHIT 359 (361)
Q Consensus 300 ~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~-~~~~~~~~~----~~a~v~~a~~~lH~~~i~ 359 (361)
.|..++..++++ +...+.+....|+.++.+ .+. .....+.+. ++..++.|+.|||++||+
T Consensus 42 ~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~ 117 (277)
T cd05577 42 NEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIV 117 (277)
T ss_pred HHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 355555555555 333555556666666544 122 111124443 267899999999999986
No 170
>PF11699 CENP-C_C: Mif2/CENP-C like; PDB: 2VPV_B.
Probab=37.64 E-value=75 Score=23.22 Aligned_cols=29 Identities=31% Similarity=0.501 Sum_probs=20.5
Q ss_pred CeEEEEEeeEEEEEeCcEEEEEeCCCCeec
Q psy9025 158 KEMYIVKTGQVQVVSGETVLATLTEGSVFG 187 (361)
Q Consensus 158 ~~ly~I~~G~v~v~~~~~~~~~l~~Gd~fG 187 (361)
...++|.+|.|++.-++... .+.+|++|=
T Consensus 34 ~~vF~V~~G~v~Vti~~~~f-~v~~G~~F~ 62 (85)
T PF11699_consen 34 TMVFYVIKGKVEVTIHETSF-VVTKGGSFQ 62 (85)
T ss_dssp EEEEEEEESEEEEEETTEEE-EEETT-EEE
T ss_pred EEEEEEEeCEEEEEEcCcEE-EEeCCCEEE
Confidence 45889999999999655433 377888773
No 171
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=37.53 E-value=2.6 Score=37.79 Aligned_cols=60 Identities=7% Similarity=-0.094 Sum_probs=34.6
Q ss_pred cCcccccCcccc----cccccccccccCchhhhh------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 300 GSKSLNKRPHRR----VNRSASADTYFHPKQQRR------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 300 ~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
.|..++.+++++ +...+.+..+.|+.++.+ .+......+++.- ...++.|+.|||+.||+
T Consensus 48 ~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~ 121 (286)
T cd07832 48 REIKALQACQHPYVVKLLDVFPHGSGFVLVMEYMPSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIM 121 (286)
T ss_pred HHHHHHHhCCCCCCcceeeEEecCCeeEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 344444444444 334555666666666655 1221111244442 67899999999999985
No 172
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=37.38 E-value=5.1 Score=35.48 Aligned_cols=43 Identities=12% Similarity=0.065 Sum_probs=28.0
Q ss_pred ccccccccCchhhhh-------hh-ccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 315 SASADTYFHPKQQRR-------LL-HQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 315 t~~d~~~~~~l~~~~-------~~-~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
.+.+..+.++.++.| .+ +..+ +++.. ...++.|++|||+.||+
T Consensus 70 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~qi~~~l~~lH~~~i~ 124 (265)
T cd06631 70 TCLDDNTISIFMEFVPGGSISSILNRFGP--LPEPVFCKYTKQILDGVAYLHNNCVV 124 (265)
T ss_pred EeecCCeEEEEEecCCCCcHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 455556666666655 12 2122 44442 78899999999999985
No 173
>COG3450 Predicted enzyme of the cupin superfamily [General function prediction only]
Probab=37.32 E-value=1.3e+02 Score=23.44 Aligned_cols=42 Identities=21% Similarity=0.349 Sum_probs=30.8
Q ss_pred EeCCCCEEEeCCCCCCeEEEEEeeEEEEEeCcEEEEEeCCCCee
Q psy9025 143 LYLPGDYICRKGEVGKEMYIVKTGQVQVVSGETVLATLTEGSVF 186 (361)
Q Consensus 143 ~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~~~~~~~~l~~Gd~f 186 (361)
...||..=..-++ +.+.-|++|.+.++.++.....+++||.|
T Consensus 51 e~TpG~~r~~y~~--~E~chil~G~v~~T~d~Ge~v~~~aGD~~ 92 (116)
T COG3450 51 ECTPGKFRVTYDE--DEFCHILEGRVEVTPDGGEPVEVRAGDSF 92 (116)
T ss_pred EecCccceEEccc--ceEEEEEeeEEEEECCCCeEEEEcCCCEE
Confidence 3455554333333 78889999999999766677889999977
No 174
>PF08006 DUF1700: Protein of unknown function (DUF1700); InterPro: IPR012963 This family contains many hypothetical bacterial proteins and two putative membrane proteins (Q6GFD0 from SWISSPROT and Q6G806 from SWISSPROT).
Probab=36.94 E-value=83 Score=26.44 Aligned_cols=55 Identities=15% Similarity=0.236 Sum_probs=35.0
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHHhCCCCCCCCCcCCCCcccHHHHHhhC--CHhHHHHHHHH
Q psy9025 53 IQERIRHLAHVFTERAQKIKRILDFPPTPSSSTTLSSSSEDENKILNNL--PLKLKTDVAIN 112 (361)
Q Consensus 53 ~q~~~~~~~~~~~~l~~~i~~y~~~~~~~~~~~~~~~~~~~e~~ll~~l--p~~Lr~~i~~~ 112 (361)
+++--..++++|.+-++.+.+||+-+.+.. ..++..|++++++| |..+-+++..+
T Consensus 7 L~~L~~~L~~lp~~e~~e~l~~Y~e~f~d~-----~~~G~sEeeii~~LG~P~~iA~~i~~~ 63 (181)
T PF08006_consen 7 LNELEKYLKKLPEEEREEILEYYEEYFDDA-----GEEGKSEEEIIAELGSPKEIAREILAE 63 (181)
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHh-----hhCCCCHHHHHHHcCCHHHHHHHHHHh
Confidence 334445556688877777777776555422 45567889999986 66665555433
No 175
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=36.13 E-value=4.9 Score=35.36 Aligned_cols=46 Identities=15% Similarity=0.079 Sum_probs=29.0
Q ss_pred cccccccccCchhhhh-------hhcc-CCCCCCCC----ccceeehhhhhhhhcccc
Q psy9025 314 RSASADTYFHPKQQRR-------LLHQ-TPTGHNNS----FECQVTVHREDIHESHIT 359 (361)
Q Consensus 314 ~t~~d~~~~~~l~~~~-------~~~~-~~~~~~~~----~~a~v~~a~~~lH~~~i~ 359 (361)
..+.++.++|+.++.+ .+.. ....+++. ++..++.|+.|||++||+
T Consensus 65 ~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~ 122 (255)
T cd08219 65 ESFEADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVL 122 (255)
T ss_pred EEEEECCEEEEEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcc
Confidence 3556666677776654 1211 11114444 278899999999999986
No 176
>PHA03211 serine/threonine kinase US3; Provisional
Probab=35.95 E-value=4.4 Score=39.85 Aligned_cols=60 Identities=13% Similarity=-0.026 Sum_probs=34.1
Q ss_pred cCcccccCcccc-c---ccccccccccCchhhhh------hhccCCCCCCCC----ccceeehhhhhhhhcccc
Q psy9025 300 GSKSLNKRPHRR-V---NRSASADTYFHPKQQRR------LLHQTPTGHNNS----FECQVTVHREDIHESHIT 359 (361)
Q Consensus 300 ~ek~i~~~~~~~-~---~~t~~d~~~~~~l~~~~------~~~~~~~~~~~~----~~a~v~~a~~~lH~~~i~ 359 (361)
.|..++.+++++ + ...+.++...++.++.+ .+......+++. ++.+++.|+.|||++||+
T Consensus 209 ~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIv 282 (461)
T PHA03211 209 HEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKYRSDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGII 282 (461)
T ss_pred HHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEE
Confidence 466666666666 2 22334444444444333 122111114433 288899999999999987
No 177
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=35.30 E-value=2.3 Score=37.55 Aligned_cols=59 Identities=12% Similarity=0.106 Sum_probs=36.5
Q ss_pred cCcccccCcccc----cccccccccccCchhhhh-------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 300 GSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 300 ~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
.|..++.+++++ +...+.+..+.++.++.| .+... ..+++.- ...++.|+.|||+.||+
T Consensus 49 ~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~i~~~l~~lh~~~i~ 122 (258)
T cd05578 49 NERRILQELNHPFLVNLWYSFQDEENMYLVVDLLLGGDLRYHLSQK-VKFSEEQVKFWICEIVLALEYLHSKGII 122 (258)
T ss_pred HHHHHHHhCCCCChHHHHHhhcCCCeEEEEEeCCCCCCHHHHHHhc-CCcCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 344445555555 344666777777776655 22212 1144442 77899999999999986
No 178
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=35.26 E-value=7 Score=34.46 Aligned_cols=60 Identities=13% Similarity=0.038 Sum_probs=34.8
Q ss_pred cCcccccCcccc----cccccccccccCchhhhh-------hhcc-CCCCCCCC----ccceeehhhhhhhhcccc
Q psy9025 300 GSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQ-TPTGHNNS----FECQVTVHREDIHESHIT 359 (361)
Q Consensus 300 ~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~-~~~~~~~~----~~a~v~~a~~~lH~~~i~ 359 (361)
.|..++..++++ +...+.+....++.++.| .+.+ ....+++. ....++.|+.|||++||+
T Consensus 51 ~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~ 126 (261)
T cd05148 51 KEVQALKRLRHKHLISLFAVCSVGEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSI 126 (261)
T ss_pred HHHHHHhcCCCcchhheeeeEecCCCeEEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 344455555554 223455666666776655 2221 11113333 278899999999999986
No 179
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=35.21 E-value=5.6 Score=35.21 Aligned_cols=17 Identities=24% Similarity=0.194 Sum_probs=15.8
Q ss_pred cceeehhhhhhhhcccc
Q psy9025 343 ECQVTVHREDIHESHIT 359 (361)
Q Consensus 343 ~a~v~~a~~~lH~~~i~ 359 (361)
..+++.|+.|||++||+
T Consensus 109 ~~ql~~al~~LH~~~i~ 125 (268)
T cd06630 109 TEQLLRGLSYLHENQII 125 (268)
T ss_pred HHHHHHHHHHHHhCCee
Confidence 78999999999999986
No 180
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=35.18 E-value=5.9 Score=34.93 Aligned_cols=59 Identities=5% Similarity=-0.014 Sum_probs=33.3
Q ss_pred CcccccCcccc----cccccccccccCchhhhh-------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 301 SKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 301 ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
|-.++..++++ +...+.+..+.|+.++.+ .+......+++.. +..++.|+.|||++||+
T Consensus 49 e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~ 122 (256)
T cd05059 49 EAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFI 122 (256)
T ss_pred HHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 33444444444 223445556666666544 2221111134332 78899999999999986
No 181
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=35.08 E-value=7.1 Score=35.27 Aligned_cols=47 Identities=6% Similarity=-0.109 Sum_probs=28.0
Q ss_pred ccccccccccCchhhhh------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 313 NRSASADTYFHPKQQRR------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 313 ~~t~~d~~~~~~l~~~~------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
...+.++.+.++.++.+ +++.....+++.. +..++.|+.|||++||+
T Consensus 68 ~~~~~~~~~~~lv~e~~~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~ 124 (298)
T cd07841 68 LDVFGHKSNINLVFEFMETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWIL 124 (298)
T ss_pred hheeecCCEEEEEEcccCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 33555555566665544 2221111144432 77899999999999986
No 182
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=34.94 E-value=3.6 Score=36.86 Aligned_cols=60 Identities=13% Similarity=0.081 Sum_probs=34.9
Q ss_pred cCcccccCcccc----cccccccccccCchhhhh------hhccCC-CCCCCCc----cceeehhhhhhhhcccc
Q psy9025 300 GSKSLNKRPHRR----VNRSASADTYFHPKQQRR------LLHQTP-TGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 300 ~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~------~~~~~~-~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
.|-.++..++++ +...+.+..+.|+.++.+ .+...+ ..+++.. +-+++.|+.|||++||+
T Consensus 47 ~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~ 121 (283)
T cd07835 47 REISLLKELNHPNIVRLLDVVHSENKLYLVFEFLDLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVL 121 (283)
T ss_pred HHHHHHHhcCCCCccCHhheeccCCeEEEEEeccCcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 344455554544 334556666666666544 222111 1144442 77899999999999986
No 183
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=34.39 E-value=5.4 Score=35.72 Aligned_cols=57 Identities=11% Similarity=-0.021 Sum_probs=35.0
Q ss_pred CcccccCcccc----cccccccccccCchhhhh-------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 301 SKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 301 ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
|..++..+.++ +...+.++.+.++.++.+ .++..+ +++.. +..++.|++|||++||+
T Consensus 52 e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~--l~~~~~~~~~~~l~~~l~~lh~~~iv 123 (277)
T cd06640 52 EITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYLGGGSALDLLRAGP--FDEFQIATMLKEILKGLDYLHSEKKI 123 (277)
T ss_pred HHHHHHhCCCCCEeeEEEEEEECCEEEEEEecCCCCcHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 33344444444 333556666777777655 233233 44432 67788999999999986
No 184
>PF04962 KduI: KduI/IolB family; InterPro: IPR021120 The KduI/IolB family of enzymes includes 5-keto 4-deoxyuronate isomerase (KduI) and 5-deoxy-glucuronate isomerase (IolB). KduI is involved in pectin degradation by free-living soil bacteria that use pectin as a carbon source, breaking it down to 2-keto-3-deoxygluconate, which can ultimately be converted to pyruvate. KduI catalyses the fourth step in pectin degradation, namely the interconversion of 5-keto-4-deoxyuronate and 2,5-diketo-3-dexoygluconate []. KduI has a TIM-barrel fold []. IolB is one of several bacterial proteins encoded by the inositol operon (iolABCDEFGHIJ) in Bacillus subtilis that are involved in myo-inositol catabolism. The enzyme is responsible for isomerization of 5-deoxy-D-glucuronic acid by IolB to produce 2-deoxy-5-keto-D-gluconic acid []. IolBs possess a cupin-like structure.; GO: 0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses, 0008152 metabolic process; PDB: 1YWK_B 2QJV_B 1X8M_A 1XRU_A.
Probab=34.30 E-value=1.1e+02 Score=27.59 Aligned_cols=77 Identities=12% Similarity=0.002 Sum_probs=49.6
Q ss_pred cceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEEeCc-EEEEEeCCCCeechh-hhhcccCCCceeeEEEecceEEEEEEe
Q psy9025 139 LRPVLYLPGDYICRKGEVGKEMYIVKTGQVQVVSGE-TVLATLTEGSVFGEI-SLLALAGTNRRTADVRSHGFSNLFVLN 216 (361)
Q Consensus 139 l~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~~~-~~~~~l~~Gd~fGe~-~ll~~~~~~~~~~~v~A~~~~~~~~l~ 216 (361)
+....+.+|+.+-..-+.-+...++++|.+.+..++ .....-..-++|... ..+.. ..-....+.|.++++++..+
T Consensus 29 ~~~l~L~~g~~~~~~~~~~E~~vv~l~G~~~v~~~g~~~~~l~~R~~vF~~~~d~lYv--p~g~~~~i~a~~~ae~~~~s 106 (261)
T PF04962_consen 29 FGVLRLEAGESLEFELERRELGVVNLGGKATVTVDGEEFYELGGRESVFDGPPDALYV--PRGTKVVIFASTDAEFAVCS 106 (261)
T ss_dssp CCCEEEECCHCCCCCCCSEEEEEEEESSSEEEEETTEEEEEE-TTSSGGGS--EEEEE---TT--EEEEESSTEEEEEEE
T ss_pred eEEEEecCCCEEeccCCCcEEEEEEeCCEEEEEeCCceEEEecccccccCCCCcEEEe--CCCCeEEEEEcCCCEEEEEc
Confidence 445667777777655444566777889999999765 444455556788553 22322 45556888999999999876
Q ss_pred H
Q psy9025 217 K 217 (361)
Q Consensus 217 ~ 217 (361)
.
T Consensus 107 a 107 (261)
T PF04962_consen 107 A 107 (261)
T ss_dssp E
T ss_pred c
Confidence 4
No 185
>KOG0663|consensus
Probab=34.08 E-value=8.9 Score=35.72 Aligned_cols=62 Identities=10% Similarity=-0.022 Sum_probs=38.5
Q ss_pred hhhccCcccccCcccc--c------ccccccccccCchhhhh------hhccCCCCCCCCc----cceeehhhhhhhhcc
Q psy9025 296 LLRCGSKSLNKRPHRR--V------NRSASADTYFHPKQQRR------LLHQTPTGHNNSF----ECQVTVHREDIHESH 357 (361)
Q Consensus 296 vl~~~ek~i~~~~~~~--~------~~t~~d~~~~~~l~~~~------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~ 357 (361)
+.+..|-+++.+++++ | -..--| -+||.|+.| ++++-++-|.++- .-+++.++.|||...
T Consensus 120 ItsLREIniLl~~~H~NIV~vkEVVvG~~~d--~iy~VMe~~EhDLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~w 197 (419)
T KOG0663|consen 120 ITSLREINILLKARHPNIVEVKEVVVGSNMD--KIYIVMEYVEHDLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNW 197 (419)
T ss_pred chhHHHHHHHHhcCCCCeeeeEEEEeccccc--eeeeeHHHHHhhHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhce
Confidence 3335666777777777 1 112222 288999999 4442221133321 677889999999999
Q ss_pred cc
Q psy9025 358 IT 359 (361)
Q Consensus 358 i~ 359 (361)
|+
T Consensus 198 il 199 (419)
T KOG0663|consen 198 IL 199 (419)
T ss_pred eE
Confidence 87
No 186
>PF06865 DUF1255: Protein of unknown function (DUF1255); InterPro: IPR009664 This family consists of several conserved hypothetical bacterial proteins of around 95 residues in length. The function of this family is unknown; PDB: 2OYZ_A 3HQX_A.
Probab=33.92 E-value=1.6e+02 Score=21.99 Aligned_cols=61 Identities=26% Similarity=0.396 Sum_probs=37.3
Q ss_pred EEeCCCCEEEeCCCCCCeEEEEEeeEEEEEe-CcEEEEEeCCCCeechhhhhcccCCCceeeEEEecceEEE
Q psy9025 142 VLYLPGDYICRKGEVGKEMYIVKTGQVQVVS-GETVLATLTEGSVFGEISLLALAGTNRRTADVRSHGFSNL 212 (361)
Q Consensus 142 ~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~-~~~~~~~l~~Gd~fGe~~ll~~~~~~~~~~~v~A~~~~~~ 212 (361)
-...||++=| |......--|.+|.+.+.- ++..+..+.+|+.|-- ....+..+++.+++.-
T Consensus 28 GVm~pGeY~F--~T~~~E~M~vvsG~l~V~lpg~~ew~~~~aGesF~V--------panssF~v~v~~~~~Y 89 (94)
T PF06865_consen 28 GVMLPGEYTF--GTSAPERMEVVSGELEVKLPGEDEWQTYSAGESFEV--------PANSSFDVKVKEPTAY 89 (94)
T ss_dssp EEE-SECEEE--EESS-EEEEEEESEEEEEETT-SS-EEEETT-EEEE---------TTEEEEEEESS-EEE
T ss_pred EEEeeeEEEE--cCCCCEEEEEEEeEEEEEcCCCcccEEeCCCCeEEE--------CCCCeEEEEECcceee
Confidence 3456777544 3556778889999999984 3445788889998855 3445667777766543
No 187
>KOG0582|consensus
Probab=33.72 E-value=6.9 Score=37.75 Aligned_cols=61 Identities=10% Similarity=-0.030 Sum_probs=39.8
Q ss_pred ccCcccccCcccc----cccccccccccCchhh--hh------hhccCCCCCCCCccce----eehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRPHRR----VNRSASADTYFHPKQQ--RR------LLHQTPTGHNNSFECQ----VTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~--~~------~~~~~~~~~~~~~~a~----v~~a~~~lH~~~i~ 359 (361)
+.|-..|..+++| .+.+|.++..++..|- .| +.+.-+.|++|...|+ |+.|++|||.+|=|
T Consensus 72 ~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~I 148 (516)
T KOG0582|consen 72 RKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHI 148 (516)
T ss_pred HHHHHHhhhcCCCCcceEEEEEEecceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCce
Confidence 4555666667888 3447777775543332 22 3333457788888665 57899999999854
No 188
>TIGR02451 anti_sig_ChrR anti-sigma factor, putative, ChrR family. The member of this family from Rhodobacter sphaeroides has been shown both to form a complex with sigma(E) and to negatively regulate tetrapyrrole biosynthesis. This protein likely contains (at least) two distinct functional domains; several smaller homologs (excluded by the model) show homology only to the C-terminal, including a motif PxHxHxGxE.
Probab=33.46 E-value=92 Score=27.13 Aligned_cols=69 Identities=14% Similarity=0.139 Sum_probs=47.0
Q ss_pred hcceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEEeCcEEEEEeCCCCeechhhhhcccCCCceeeEEEec--ceEEEEEE
Q psy9025 138 KLRPVLYLPGDYICRKGEVGKEMYIVKTGQVQVVSGETVLATLTEGSVFGEISLLALAGTNRRTADVRSH--GFSNLFVL 215 (361)
Q Consensus 138 ~l~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~~~~~~~~l~~Gd~fGe~~ll~~~~~~~~~~~v~A~--~~~~~~~l 215 (361)
......+.+|..+-.....+..+.+|++|.+. .+. ..+.+||+.=. ......+.++. ++|.|+.+
T Consensus 128 ~v~Ll~i~pG~~~p~H~H~G~E~tlVLeG~f~--de~---g~y~~Gd~i~~--------p~~~~H~p~a~~~~~Cicl~v 194 (215)
T TIGR02451 128 RVRLLYIEAGQSIPQHTHKGFELTLVLHGAFS--DET---GVYGVGDFEEA--------DGSVQHQPRTVSGGDCLCLAV 194 (215)
T ss_pred EEEEEEECCCCccCCCcCCCcEEEEEEEEEEE--cCC---CccCCCeEEEC--------CCCCCcCcccCCCCCeEEEEE
Confidence 45678899999999888888899999999964 222 34677776522 22233445555 55998887
Q ss_pred eHHH
Q psy9025 216 NKDD 219 (361)
Q Consensus 216 ~~~~ 219 (361)
.-..
T Consensus 195 ~dap 198 (215)
T TIGR02451 195 LDAP 198 (215)
T ss_pred ecCC
Confidence 6443
No 189
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=33.26 E-value=6.1 Score=34.58 Aligned_cols=60 Identities=5% Similarity=-0.045 Sum_probs=33.2
Q ss_pred cCcccccCcccc----cccccccccccCchhhhh-------hhccCCCCCCCC----ccceeehhhhhhhhcccc
Q psy9025 300 GSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQTPTGHNNS----FECQVTVHREDIHESHIT 359 (361)
Q Consensus 300 ~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~~~~~~~~~----~~a~v~~a~~~lH~~~i~ 359 (361)
.|.++++.+.++ +...+.+..+.+++++.+ .+++....+++. .+..++.|+.|||++||+
T Consensus 41 ~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~ 115 (251)
T cd05041 41 QEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCI 115 (251)
T ss_pred HHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEe
Confidence 344444444444 223555556666665544 232122113333 166788999999999986
No 190
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=32.97 E-value=5.5 Score=35.31 Aligned_cols=43 Identities=9% Similarity=-0.109 Sum_probs=28.7
Q ss_pred ccccccccCchhhhh-------hh-ccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 315 SASADTYFHPKQQRR-------LL-HQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 315 t~~d~~~~~~l~~~~-------~~-~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
.+.+..+.|+.++.| ++ ...+ +++.. ++.++.++.|||+.||+
T Consensus 74 ~~~~~~~~~lv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~i~~~l~~lH~~~i~ 128 (267)
T cd06645 74 SYLRRDKLWICMEFCGGGSLQDIYHVTGP--LSESQIAYVSRETLQGLYYLHSKGKM 128 (267)
T ss_pred EEEeCCEEEEEEeccCCCcHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 445556677777666 12 2122 55553 78899999999999986
No 191
>PRK10579 hypothetical protein; Provisional
Probab=32.75 E-value=2.1e+02 Score=21.37 Aligned_cols=60 Identities=18% Similarity=0.245 Sum_probs=40.5
Q ss_pred EEeCCCCEEEeCCCCCCeEEEEEeeEEEEE-eCcEEEEEeCCCCeechhhhhcccCCCceeeEEEecceEE
Q psy9025 142 VLYLPGDYICRKGEVGKEMYIVKTGQVQVV-SGETVLATLTEGSVFGEISLLALAGTNRRTADVRSHGFSN 211 (361)
Q Consensus 142 ~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~-~~~~~~~~l~~Gd~fGe~~ll~~~~~~~~~~~v~A~~~~~ 211 (361)
-...||++ .-|......-=|++|.+.+. .++..+..+.+|+.|--. ...+..+++.+.+.
T Consensus 28 GVm~pGey--~F~T~~~E~MeivsG~l~V~Lpg~~ew~~~~aG~sF~Vp--------anssF~l~v~~~t~ 88 (94)
T PRK10579 28 GVMAEGEY--TFSTAEPEEMTVISGALNVLLPGATDWQVYEAGEVFNVP--------GHSEFHLQVAEPTS 88 (94)
T ss_pred EEEeeeEE--EEcCCCcEEEEEEeeEEEEECCCCcccEEeCCCCEEEEC--------CCCeEEEEECccee
Confidence 34567774 44556677888999999998 455667889999998653 33345555555443
No 192
>TIGR01479 GMP_PMI mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase. This enzyme is known to be bifunctional, as both mannose-6-phosphate isomerase (EC 5.3.1.8) (PMI) and mannose-1-phosphate guanylyltransferase (EC 2.7.7.22) in Pseudomonas aeruginosa, Xanthomonas campestris, and Gluconacetobacter xylinus. The literature on the enzyme from E. coli attributes mannose-6-phosphate isomerase activity to an adjacent gene, but the present sequence has not been shown to lack the activity. The PMI domain is C-terminal.
Probab=32.57 E-value=2.2e+02 Score=28.02 Aligned_cols=69 Identities=17% Similarity=0.127 Sum_probs=39.7
Q ss_pred ceEEeCCCCEEEe-CCCCCCeEEEEEeeEEEEEeCcEEEEEeCCCCeechhhhhcccCCCceeeEEEecceEEEEEE
Q psy9025 140 RPVLYLPGDYICR-KGEVGKEMYIVKTGQVQVVSGETVLATLTEGSVFGEISLLALAGTNRRTADVRSHGFSNLFVL 215 (361)
Q Consensus 140 ~~~~~~~ge~I~~-~G~~~~~ly~I~~G~v~v~~~~~~~~~l~~Gd~fGe~~ll~~~~~~~~~~~v~A~~~~~~~~l 215 (361)
....+.||..+-. .....+..++|++|.+.+.-++.. ..+.+||.+--.+ +.++...-...++++++.+
T Consensus 379 ~~~~i~PG~~~~~h~H~~~~E~~~Vl~G~~~v~~dg~~-~~l~~GDsi~ip~------~~~H~~~N~g~~~~~~i~v 448 (468)
T TIGR01479 379 KRITVKPGEKLSLQMHHHRAEHWIVVSGTARVTIGDET-LLLTENESTYIPL------GVIHRLENPGKIPLELIEV 448 (468)
T ss_pred EEEEECCCCccCccccCCCceEEEEEeeEEEEEECCEE-EEecCCCEEEECC------CCcEEEEcCCCCCEEEEEE
Confidence 3445677764321 222345677899999999855433 5889999774322 3333333333445555554
No 193
>TIGR03404 bicupin_oxalic bicupin, oxalate decarboxylase family. Members of this protein family are defined as bicupins as they have two copies of the cupin domain (pfam00190). Two different known activities for members of this family are oxalate decarboxylase (EC 4.1.1.2) and oxalate oxidase (EC 1.2.3.4), although the latter activity has more often been found in distantly related monocupin (germin) proteins.
Probab=31.65 E-value=1.3e+02 Score=28.64 Aligned_cols=50 Identities=14% Similarity=0.101 Sum_probs=34.2
Q ss_pred cceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEEe----CcEEEEEeCCCCeech
Q psy9025 139 LRPVLYLPGDYICRKGEVGKEMYIVKTGQVQVVS----GETVLATLTEGSVFGE 188 (361)
Q Consensus 139 l~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~----~~~~~~~l~~Gd~fGe 188 (361)
+....+.+|...-.--....++.+|++|.+.+.- +......+.+||+|=.
T Consensus 69 ~~~~~l~pG~~~~~HwH~~~E~~yVl~G~~~v~~~d~~g~~~~~~L~~GD~~~f 122 (367)
T TIGR03404 69 GVNMRLEPGAIRELHWHKEAEWAYVLYGSCRITAVDENGRNYIDDVGAGDLWYF 122 (367)
T ss_pred ceEEEEcCCCCCCcccCCCceEEEEEeeEEEEEEEcCCCcEEEeEECCCCEEEE
Confidence 4456677877654322345679999999999972 3344458999998844
No 194
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=31.49 E-value=6.1 Score=36.28 Aligned_cols=59 Identities=5% Similarity=-0.096 Sum_probs=34.4
Q ss_pred CcccccCcccc----cccccccccccCchhhhh------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 301 SKSLNKRPHRR----VNRSASADTYFHPKQQRR------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 301 ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
|..++..++++ +..-+.+..+.|+.++.| .+......+++.. ...++.|+.|||++||+
T Consensus 71 E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~ 143 (313)
T cd06633 71 EVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMI 143 (313)
T ss_pred HHHHHHhCCCCCCccEEEEEEeCCEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 44444555544 233445556666777665 1211111144442 67899999999999986
No 195
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=31.34 E-value=5.2 Score=35.91 Aligned_cols=58 Identities=5% Similarity=-0.126 Sum_probs=32.9
Q ss_pred cCcccccCcccc----cccccccccccCchhhhhh---hc-cCCCCCCCC----ccceeehhhhhhhhcccc
Q psy9025 300 GSKSLNKRPHRR----VNRSASADTYFHPKQQRRL---LH-QTPTGHNNS----FECQVTVHREDIHESHIT 359 (361)
Q Consensus 300 ~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~~---~~-~~~~~~~~~----~~a~v~~a~~~lH~~~i~ 359 (361)
.|..++..++++ +...+.+..+.++.++.+- +. ... +++. ++..++.|+.|||+.||+
T Consensus 48 ~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~--~~~~~~~~~~~qi~~~l~~lH~~~i~ 117 (279)
T cd06619 48 SELEILYKCDSPYIIGFYGAFFVENRISICTEFMDGGSLDVYRK--IPEHVLGRIAVAVVKGLTYLWSLKIL 117 (279)
T ss_pred HHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecCCCCChHHhhc--CCHHHHHHHHHHHHHHHHHHHHCCEe
Confidence 344555555555 2334444555555555441 11 011 3333 278899999999999986
No 196
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=31.15 E-value=6 Score=35.28 Aligned_cols=43 Identities=16% Similarity=0.087 Sum_probs=28.4
Q ss_pred ccccccccCchhhhh-------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 315 SASADTYFHPKQQRR-------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 315 t~~d~~~~~~l~~~~-------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
.+.+..++|+.++.+ .++..+ +++.. +..++.|+.|||+.||+
T Consensus 67 ~~~~~~~~~~v~e~~~~~~L~~~~~~~~--~~~~~~~~~~~ql~~~l~~lh~~~i~ 120 (274)
T cd06609 67 SFLKGSKLWIIMEYCGGGSCLDLLKPGK--LDETYIAFILREVLLGLEYLHEEGKI 120 (274)
T ss_pred EEEECCeEEEEEEeeCCCcHHHHHhhcC--CCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 445556666666544 233223 44443 88899999999999985
No 197
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=31.11 E-value=3.4 Score=36.80 Aligned_cols=60 Identities=8% Similarity=0.038 Sum_probs=36.7
Q ss_pred ccCcccccCcc-cc----cccccccccccCchhhhh-------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRPH-RR----VNRSASADTYFHPKQQRR-------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~-~~----~~~t~~d~~~~~~l~~~~-------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
..|..++..++ ++ +...+.+....++.++.+ .+++.. .+++.. ...++.|+.+||+.||+
T Consensus 49 ~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~i~~ql~~~l~~Lh~~~~~ 124 (280)
T cd05581 49 KIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVLEYAPNGELLQYIRKYG-SLDEKCTRFYAAEILLALEYLHSKGII 124 (280)
T ss_pred HHHHHHHHhcccCCCchhHHHHhcCCceEEEEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 44555555544 44 334566666677777665 233221 144442 78899999999999985
No 198
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=30.37 E-value=8.2 Score=33.80 Aligned_cols=47 Identities=13% Similarity=-0.054 Sum_probs=29.5
Q ss_pred ccccccccccCchhhhh-------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 313 NRSASADTYFHPKQQRR-------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 313 ~~t~~d~~~~~~l~~~~-------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
...+.+..++|++++.| ++......+++.. +..++.|+.|||+.||+
T Consensus 64 ~~~~~~~~~~~l~~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~ 121 (256)
T cd06612 64 YGSYFKNTDLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKI 121 (256)
T ss_pred eeeeecCCcEEEEEecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 33555566677776655 2221111244442 77889999999999986
No 199
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=30.03 E-value=7 Score=35.47 Aligned_cols=43 Identities=12% Similarity=-0.015 Sum_probs=27.2
Q ss_pred ccccccccCchhhhh-------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 315 SASADTYFHPKQQRR-------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 315 t~~d~~~~~~l~~~~-------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
.+.+..+.++.++.+ ++.... +++.. +..++.++.|||++||+
T Consensus 87 ~~~~~~~~~lv~e~~~~~~L~~~~~~~~--l~~~~~~~~~~qi~~~l~~LH~~~iv 140 (292)
T cd06658 87 SYLVGDELWVVMEFLEGGALTDIVTHTR--MNEEQIATVCLSVLRALSYLHNQGVI 140 (292)
T ss_pred heecCCeEEEEEeCCCCCcHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCEe
Confidence 445555666666555 222122 34432 77789999999999986
No 200
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=29.88 E-value=7.8 Score=34.30 Aligned_cols=17 Identities=12% Similarity=0.202 Sum_probs=15.7
Q ss_pred cceeehhhhhhhhcccc
Q psy9025 343 ECQVTVHREDIHESHIT 359 (361)
Q Consensus 343 ~a~v~~a~~~lH~~~i~ 359 (361)
+..++.++.|||++||+
T Consensus 110 ~~ql~~~l~~lH~~~i~ 126 (263)
T cd05052 110 ATQISSAMEYLEKKNFI 126 (263)
T ss_pred HHHHHHHHHHHHhCCEe
Confidence 78899999999999986
No 201
>PF07697 7TMR-HDED: 7TM-HD extracellular; InterPro: IPR011624 This entry represents the extracellular domain of the 7TM-HD (7TM Receptors with HD hydrolase) protein family []. These proteins are known or predicted, to posses metal-dependent phospohydrolase activity.
Probab=29.86 E-value=56 Score=28.17 Aligned_cols=58 Identities=24% Similarity=0.393 Sum_probs=39.7
Q ss_pred hhCCHhHHHHHHHHHHHHHhccCcccc-cCCHHHHHHHHHhcceEE--eCCCCEEEeCCCCC
Q psy9025 99 NNLPLKLKTDVAINVHIQTLSKVQLFQ-DCDEALLRELVLKLRPVL--YLPGDYICRKGEVG 157 (361)
Q Consensus 99 ~~lp~~Lr~~i~~~~~~~~l~~~~~f~-~l~~~~l~~l~~~l~~~~--~~~ge~I~~~G~~~ 157 (361)
..+|... ..+...+...+++-.-.|. ..+....+.......+.. +.+|+.|+++|+..
T Consensus 146 ~~~~~~~-~~~~~~l~~~~i~PNl~~d~~~T~~~~~~a~~~V~pv~~~V~~Ge~IV~kGe~V 206 (222)
T PF07697_consen 146 SNLPSEL-RELLKELLSNFIRPNLIYDEEATEKAREEALASVSPVRGMVKKGEVIVRKGEIV 206 (222)
T ss_pred cCCCHHH-HHHHHHHHHhcCCchhhcCHHHHHHHHHHHHhcCCchHhhccCCCEEecCCcEe
Confidence 3555553 3344444545554444443 367777888888899888 99999999999965
No 202
>PF14377 DUF4414: Domain of unknown function (DUF4414)
Probab=29.74 E-value=1.1e+02 Score=23.36 Aligned_cols=54 Identities=15% Similarity=0.200 Sum_probs=34.9
Q ss_pred HHHHhhHHHHHHHHHHHhCCCCCC---CCCcCCCCcccHHHHHhhCCHhHHHHHHHH
Q psy9025 59 HLAHVFTERAQKIKRILDFPPTPS---SSTTLSSSSEDENKILNNLPLKLKTDVAIN 112 (361)
Q Consensus 59 ~~~~~~~~l~~~i~~y~~~~~~~~---~~~~~~~~~~~e~~ll~~lp~~Lr~~i~~~ 112 (361)
.+.-+|.+++..|..++.-..... ...+......+.-.+|..||+.||.+|...
T Consensus 49 fL~ALP~diR~EVl~qe~~~~~~~~~~~~~~~~~~~~d~asflatl~p~LR~evL~~ 105 (108)
T PF14377_consen 49 FLAALPPDIREEVLAQERRERRRQERQQNARQHPQEMDNASFLATLPPELRREVLLD 105 (108)
T ss_pred HHHhCCHHHHHHHHHHHHHHHHHhhhccccccCCCCCCHHHHHHhCCHHHHHHHhhc
Confidence 345578888888887765432110 000113455677889999999999998754
No 203
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=29.44 E-value=8.1 Score=34.82 Aligned_cols=17 Identities=29% Similarity=0.200 Sum_probs=15.5
Q ss_pred cceeehhhhhhhhcccc
Q psy9025 343 ECQVTVHREDIHESHIT 359 (361)
Q Consensus 343 ~a~v~~a~~~lH~~~i~ 359 (361)
+..++.|+.|||++||+
T Consensus 109 ~~qi~~~L~~lH~~~i~ 125 (291)
T cd07870 109 MFQLLRGLAYIHGQHIL 125 (291)
T ss_pred HHHHHHHHHHHHhCCcc
Confidence 67899999999999986
No 204
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=29.36 E-value=8.5 Score=33.94 Aligned_cols=61 Identities=10% Similarity=0.006 Sum_probs=34.0
Q ss_pred ccCcccccCcccc----cccccccccccCchhhhh-------hhccC-CCCCCCC----ccceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQT-PTGHNNS----FECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~~-~~~~~~~----~~a~v~~a~~~lH~~~i~ 359 (361)
..|..+++.++++ +...+.+..+.++.++.+ .+... ...+.+. +...++.|++|||+.||+
T Consensus 49 ~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~ 125 (261)
T cd05072 49 LEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYI 125 (261)
T ss_pred HHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 3455555555544 223455556666666544 22211 1112222 267899999999999986
No 205
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=29.26 E-value=5.3 Score=35.63 Aligned_cols=17 Identities=18% Similarity=0.012 Sum_probs=15.6
Q ss_pred cceeehhhhhhhhcccc
Q psy9025 343 ECQVTVHREDIHESHIT 359 (361)
Q Consensus 343 ~a~v~~a~~~lH~~~i~ 359 (361)
+..++.|+.+||+.||+
T Consensus 104 ~~~i~~~l~~LH~~~i~ 120 (282)
T cd07829 104 MYQLLRGLAYCHSHRIL 120 (282)
T ss_pred HHHHHHHHHHHHHCCcc
Confidence 78899999999999986
No 206
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=28.97 E-value=6.5 Score=35.18 Aligned_cols=57 Identities=12% Similarity=0.023 Sum_probs=34.2
Q ss_pred CcccccCcccc----cccccccccccCchhhhh-------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 301 SKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 301 ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
|..++..++++ +...+.++.+.+++++.| .+++.+ +++.. +.+++.|+.+||++||+
T Consensus 52 e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~i~~~~--~~~~~~~~~~~~l~~~l~~lh~~~i~ 123 (277)
T cd06641 52 EITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP--LDETQIATILREILKGLDYLHSEKKI 123 (277)
T ss_pred HHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeCCCCcHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHccCCee
Confidence 33444444444 233455666667777655 233222 33332 78899999999999986
No 207
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=28.76 E-value=7.9 Score=34.09 Aligned_cols=17 Identities=24% Similarity=0.204 Sum_probs=15.3
Q ss_pred cceeehhhhhhhhcccc
Q psy9025 343 ECQVTVHREDIHESHIT 359 (361)
Q Consensus 343 ~a~v~~a~~~lH~~~i~ 359 (361)
+..++.|+.|||+.||+
T Consensus 110 ~~~l~~~l~~lH~~~i~ 126 (263)
T cd06625 110 TRQILEGVEYLHSNMIV 126 (263)
T ss_pred HHHHHHHHHHHHhCCee
Confidence 67799999999999986
No 208
>PRK11171 hypothetical protein; Provisional
Probab=28.68 E-value=3.5e+02 Score=24.34 Aligned_cols=50 Identities=16% Similarity=0.069 Sum_probs=38.4
Q ss_pred hcceEEeCCCCEEEeC-CCCCCeEEEEEeeEEEEEeCcEEEEEeCCCCeech
Q psy9025 138 KLRPVLYLPGDYICRK-GEVGKEMYIVKTGQVQVVSGETVLATLTEGSVFGE 188 (361)
Q Consensus 138 ~l~~~~~~~ge~I~~~-G~~~~~ly~I~~G~v~v~~~~~~~~~l~~Gd~fGe 188 (361)
.+....+.||..+-.. .....+.++|++|+..+..++ ....+.+||++-.
T Consensus 185 ~~~~~~l~PG~~~~~~~~~~~ee~i~Vl~G~~~~~~~~-~~~~l~~GD~i~~ 235 (266)
T PRK11171 185 HVNIVTFEPGASIPFVETHVMEHGLYVLEGKGVYRLNN-DWVEVEAGDFIWM 235 (266)
T ss_pred EEEEEEECCCCEEccCcCCCceEEEEEEeCEEEEEECC-EEEEeCCCCEEEE
Confidence 4667889999988763 556679999999999997543 3466889997633
No 209
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=28.57 E-value=16 Score=33.90 Aligned_cols=17 Identities=18% Similarity=0.165 Sum_probs=15.6
Q ss_pred cceeehhhhhhhhcccc
Q psy9025 343 ECQVTVHREDIHESHIT 359 (361)
Q Consensus 343 ~a~v~~a~~~lH~~~i~ 359 (361)
+.+++.|+.|||+.||+
T Consensus 112 ~~ql~~aL~~LH~~~iv 128 (336)
T cd07849 112 LYQILRGLKYIHSANVL 128 (336)
T ss_pred HHHHHHHHHHHHhCCee
Confidence 77899999999999986
No 210
>KOG4645|consensus
Probab=28.34 E-value=14 Score=40.57 Aligned_cols=80 Identities=9% Similarity=-0.034 Sum_probs=51.4
Q ss_pred CcchhHHHhhcccCcccchhhhccCcccccCcccc-ccc---ccccccccCchhhhh-------hhc-cCCCCCCCC---
Q psy9025 277 PKLLPIVMQVVPQNSMASKLLRCGSKSLNKRPHRR-VNR---SASADTYFHPKQQRR-------LLH-QTPTGHNNS--- 341 (361)
Q Consensus 277 ~~~l~~~~~~i~~~~~~~~vl~~~ek~i~~~~~~~-~~~---t~~d~~~~~~l~~~~-------~~~-~~~~~~~~~--- 341 (361)
..+.+.++-+...+.....+ ..|-.++..+.++ +.+ -..+..-+|+-||.| ++. ++. .+|-
T Consensus 1262 llAvKEI~iq~~~~k~~~~i--~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFMEyC~~GsLa~ll~~gri--~dE~vt~ 1337 (1509)
T KOG4645|consen 1262 LLAVKEIKIQDSDHKTFKLI--AEEMKVLEGLNHPNLVRYYGVEVHREKVYIFMEYCEGGSLASLLEHGRI--EDEMVTR 1337 (1509)
T ss_pred hhhhhhhhcCccccccCcch--HHHHHHHHhccCccccccCceeecHHHHHHHHHHhccCcHHHHHHhcch--hhhhHHH
Confidence 44556663333334444555 6677777777777 433 444455688889999 222 212 4444
Q ss_pred -ccceeehhhhhhhhccccC
Q psy9025 342 -FECQVTVHREDIHESHITS 360 (361)
Q Consensus 342 -~~a~v~~a~~~lH~~~i~~ 360 (361)
|++.+++++.|||+.|||-
T Consensus 1338 vyt~qll~gla~LH~~gIVH 1357 (1509)
T KOG4645|consen 1338 VYTKQLLEGLAYLHEHGIVH 1357 (1509)
T ss_pred HHHHHHHHHHHHHHhcCcee
Confidence 5999999999999999973
No 211
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=28.21 E-value=9.2 Score=33.39 Aligned_cols=17 Identities=12% Similarity=0.104 Sum_probs=15.9
Q ss_pred cceeehhhhhhhhcccc
Q psy9025 343 ECQVTVHREDIHESHIT 359 (361)
Q Consensus 343 ~a~v~~a~~~lH~~~i~ 359 (361)
..+++.|+.|||++||+
T Consensus 111 ~~~l~~al~~lH~~~i~ 127 (262)
T cd00192 111 AIQIAKGMEYLASKKFV 127 (262)
T ss_pred HHHHHHHHHHHHcCCcc
Confidence 88999999999999986
No 212
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=28.19 E-value=13 Score=32.62 Aligned_cols=17 Identities=29% Similarity=0.431 Sum_probs=15.7
Q ss_pred cceeehhhhhhhhcccc
Q psy9025 343 ECQVTVHREDIHESHIT 359 (361)
Q Consensus 343 ~a~v~~a~~~lH~~~i~ 359 (361)
+.+++.|+.|||+.||+
T Consensus 103 ~~qi~~aL~~lH~~~i~ 119 (260)
T cd05611 103 IAEVVLGVEDLHQRGII 119 (260)
T ss_pred HHHHHHHHHHHHHCCee
Confidence 78899999999999986
No 213
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=28.16 E-value=11 Score=32.99 Aligned_cols=17 Identities=18% Similarity=0.366 Sum_probs=15.6
Q ss_pred cceeehhhhhhhhcccc
Q psy9025 343 ECQVTVHREDIHESHIT 359 (361)
Q Consensus 343 ~a~v~~a~~~lH~~~i~ 359 (361)
+..++.|++|||++||+
T Consensus 91 ~~ql~~~l~~lH~~~i~ 107 (237)
T cd05576 91 AAEMVVALDALHREGIV 107 (237)
T ss_pred HHHHHHHHHHHHhCCee
Confidence 78899999999999986
No 214
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=27.29 E-value=11 Score=33.43 Aligned_cols=17 Identities=0% Similarity=-0.046 Sum_probs=15.4
Q ss_pred cceeehhhhhhhhcccc
Q psy9025 343 ECQVTVHREDIHESHIT 359 (361)
Q Consensus 343 ~a~v~~a~~~lH~~~i~ 359 (361)
...++.|+.|||+.||+
T Consensus 113 ~~~l~~al~~lH~~~i~ 129 (268)
T cd05063 113 LRGIAAGMKYLSDMNYV 129 (268)
T ss_pred HHHHHHHHHHHHHCCee
Confidence 77899999999999986
No 215
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=27.24 E-value=8.4 Score=35.05 Aligned_cols=58 Identities=10% Similarity=-0.013 Sum_probs=34.0
Q ss_pred cCcccccCcccc----cccccccccccCchhhhh-------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 300 GSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 300 ~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
.|..++..++++ +...+.++...|++++.+ +..... +++.. +..++.|+.|||+.||+
T Consensus 67 ~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~qi~~~L~~LH~~~iv 139 (297)
T cd06659 67 NEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQTR--LNEEQIATVCESVLQALCYLHSQGVI 139 (297)
T ss_pred HHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCCHHHHHhhcC--CCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 344444555554 333455555666666544 222122 44432 77899999999999986
No 216
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=27.06 E-value=7.5 Score=36.11 Aligned_cols=58 Identities=9% Similarity=-0.035 Sum_probs=35.9
Q ss_pred cCcccccCcccc----cccccccccccCchhhhh-------hhc-cCCCCCCCCc----cceeehhhhhhhhc-ccc
Q psy9025 300 GSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLH-QTPTGHNNSF----ECQVTVHREDIHES-HIT 359 (361)
Q Consensus 300 ~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~-~~~~~~~~~~----~a~v~~a~~~lH~~-~i~ 359 (361)
.|-.++..++++ +...+.+..++++.++.| ++. ..+ +++.. +.+++.|+.|||++ ||+
T Consensus 52 ~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~l~~~l~~lH~~~~iv 126 (333)
T cd06650 52 RELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTYLREKHKIM 126 (333)
T ss_pred HHHHHHHHCCCCcccceeEEEEECCEEEEEEecCCCCcHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHhcCCEE
Confidence 444555555555 334566677777777766 222 122 45543 77899999999985 565
No 217
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=26.70 E-value=9.1 Score=34.90 Aligned_cols=45 Identities=9% Similarity=-0.023 Sum_probs=27.5
Q ss_pred ccccccccCchhhhh-------hhcc-CCCCCCCC----ccceeehhhhhhhhcccc
Q psy9025 315 SASADTYFHPKQQRR-------LLHQ-TPTGHNNS----FECQVTVHREDIHESHIT 359 (361)
Q Consensus 315 t~~d~~~~~~l~~~~-------~~~~-~~~~~~~~----~~a~v~~a~~~lH~~~i~ 359 (361)
.+.+...+|+.++.+ +++. ....+++. ++..++.|+.|||++||+
T Consensus 107 ~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~iv 163 (302)
T cd05055 107 ACTIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCI 163 (302)
T ss_pred EEecCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 455555666666654 1221 11113333 277899999999999986
No 218
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=26.59 E-value=9.2 Score=33.81 Aligned_cols=17 Identities=18% Similarity=0.094 Sum_probs=15.6
Q ss_pred cceeehhhhhhhhcccc
Q psy9025 343 ECQVTVHREDIHESHIT 359 (361)
Q Consensus 343 ~a~v~~a~~~lH~~~i~ 359 (361)
+..++.|++|||+.||+
T Consensus 112 ~~~l~~~l~~lH~~~iv 128 (267)
T cd06628 112 VRQILKGLNYLHNRGII 128 (267)
T ss_pred HHHHHHHHHHHHhcCcc
Confidence 78899999999999986
No 219
>TIGR03404 bicupin_oxalic bicupin, oxalate decarboxylase family. Members of this protein family are defined as bicupins as they have two copies of the cupin domain (pfam00190). Two different known activities for members of this family are oxalate decarboxylase (EC 4.1.1.2) and oxalate oxidase (EC 1.2.3.4), although the latter activity has more often been found in distantly related monocupin (germin) proteins.
Probab=26.48 E-value=3.8e+02 Score=25.49 Aligned_cols=48 Identities=19% Similarity=0.097 Sum_probs=33.7
Q ss_pred cceEEeCCCCEEEeCCCC-CCeEEEEEeeEEEEEe----CcEEEEEeCCCCee
Q psy9025 139 LRPVLYLPGDYICRKGEV-GKEMYIVKTGQVQVVS----GETVLATLTEGSVF 186 (361)
Q Consensus 139 l~~~~~~~ge~I~~~G~~-~~~ly~I~~G~v~v~~----~~~~~~~l~~Gd~f 186 (361)
+....+.||...-.-=-+ .+++++|++|.+++.- +......+++||++
T Consensus 247 ~~~~~l~PG~~~~~H~H~~~~E~~yvl~G~~~~~v~d~~g~~~~~~l~~GD~~ 299 (367)
T TIGR03404 247 AAIVTVEPGAMRELHWHPNADEWQYFIQGQARMTVFAAGGNARTFDYQAGDVG 299 (367)
T ss_pred EEEEEECCCCccCCeeCcCCCeEEEEEEEEEEEEEEecCCcEEEEEECCCCEE
Confidence 556777888865432233 5789999999998872 23445679999976
No 220
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=26.41 E-value=8.3 Score=34.13 Aligned_cols=17 Identities=6% Similarity=-0.148 Sum_probs=15.4
Q ss_pred cceeehhhhhhhhcccc
Q psy9025 343 ECQVTVHREDIHESHIT 359 (361)
Q Consensus 343 ~a~v~~a~~~lH~~~i~ 359 (361)
+..++.|+.|||++||+
T Consensus 112 ~~qi~~~l~~lH~~~i~ 128 (267)
T cd06646 112 CRETLQGLAYLHSKGKM 128 (267)
T ss_pred HHHHHHHHHHHHHCCcc
Confidence 77889999999999986
No 221
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=26.19 E-value=9.8 Score=33.37 Aligned_cols=60 Identities=8% Similarity=-0.026 Sum_probs=34.7
Q ss_pred cCcccccCcccc----cccccccccccCchhhhh-------hhccC-CCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 300 GSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQT-PTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 300 ~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~~-~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
.|-.++.+++++ +...+.+..++++.++.| .+... ...+++.. ...++.++.|||+.||+
T Consensus 48 ~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~ 123 (256)
T cd08221 48 NEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGIL 123 (256)
T ss_pred HHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 344444554444 333555666677666655 22211 11134332 67789999999999985
No 222
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=25.81 E-value=10 Score=33.25 Aligned_cols=45 Identities=7% Similarity=-0.067 Sum_probs=27.0
Q ss_pred ccccccccCchhhhh-------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 315 SASADTYFHPKQQRR-------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 315 t~~d~~~~~~l~~~~-------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
.+.+..+.+++++.+ .+......+++.. +..++.|+.+||++||+
T Consensus 67 ~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~ 122 (256)
T cd05112 67 VCTERSPICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVI 122 (256)
T ss_pred EEccCCceEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 445555666666544 2221111144432 67889999999999986
No 223
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=25.77 E-value=12 Score=34.01 Aligned_cols=60 Identities=3% Similarity=-0.157 Sum_probs=34.3
Q ss_pred cCcccccCcccc----cccccccccccCchhhhh------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 300 GSKSLNKRPHRR----VNRSASADTYFHPKQQRR------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 300 ~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
.|-.++..++++ +...+.+....|++++.| ++......+++.. +.+++.|+.|||+.||+
T Consensus 64 ~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~ 137 (307)
T cd06607 64 KEVRFLQQLRHPNTIEYKGCYLREHTAWLVMEYCLGSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERI 137 (307)
T ss_pred HHHHHHHhCCCCCEEEEEEEEEeCCeEEEEHHhhCCCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCce
Confidence 344444455555 223444555666677665 1110111144442 77899999999999986
No 224
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=25.76 E-value=10 Score=33.60 Aligned_cols=17 Identities=6% Similarity=-0.029 Sum_probs=15.0
Q ss_pred cceeehhhhhhhhcccc
Q psy9025 343 ECQVTVHREDIHESHIT 359 (361)
Q Consensus 343 ~a~v~~a~~~lH~~~i~ 359 (361)
+-.++.|+.|||++||+
T Consensus 112 ~~~l~~al~~lH~~g~~ 128 (269)
T cd05065 112 LRGIAAGMKYLSEMNYV 128 (269)
T ss_pred HHHHHHHHHHHHHCCEe
Confidence 56788999999999986
No 225
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=25.35 E-value=9.2 Score=34.95 Aligned_cols=58 Identities=9% Similarity=-0.039 Sum_probs=35.7
Q ss_pred cCcccccCcccc----cccccccccccCchhhhh-------hhc-cCCCCCCCCc----cceeehhhhhhhh-cccc
Q psy9025 300 GSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLH-QTPTGHNNSF----ECQVTVHREDIHE-SHIT 359 (361)
Q Consensus 300 ~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~-~~~~~~~~~~----~a~v~~a~~~lH~-~~i~ 359 (361)
.|..++.+++++ +...+.+..+++++++.+ .++ ..+ +++.. +..++.|+.|||+ .||+
T Consensus 48 ~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey~~~~~L~~~l~~~~~--~~~~~~~~~~~~i~~~l~~lH~~~~i~ 122 (308)
T cd06615 48 RELKVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPENILGKISIAVLRGLTYLREKHKIM 122 (308)
T ss_pred HHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeeccCCCcHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHhhCCEE
Confidence 455555555555 333556666777777655 222 122 44543 7889999999998 4764
No 226
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=24.69 E-value=10 Score=33.06 Aligned_cols=17 Identities=0% Similarity=-0.050 Sum_probs=15.0
Q ss_pred cceeehhhhhhhhcccc
Q psy9025 343 ECQVTVHREDIHESHIT 359 (361)
Q Consensus 343 ~a~v~~a~~~lH~~~i~ 359 (361)
...++.|+.|||++||+
T Consensus 99 ~~~i~~~l~~lH~~~~~ 115 (250)
T cd05085 99 ALDAAAGMAYLESKNCI 115 (250)
T ss_pred HHHHHHHHHHHHhCCee
Confidence 67788999999999986
No 227
>PF00190 Cupin_1: Cupin; InterPro: IPR006045 This family represents the conserved barrel domain of the 'cupin' superfamily ('cupa' is the Latin term for a small barrel). This family contains 11S and 7S plant seed storage proteins, and germins. Plant seed storage proteins provide the major nitrogen source for the developing plant. ; GO: 0045735 nutrient reservoir activity; PDB: 2E9Q_A 2EVX_A 1OD5_A 1UCX_A 1UD1_C 1FXZ_C 3KGL_C 3KSC_D 1UIJ_F 1IPK_B ....
Probab=24.67 E-value=1.6e+02 Score=23.56 Aligned_cols=49 Identities=27% Similarity=0.266 Sum_probs=33.6
Q ss_pred ceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEE--eCc-------EEEE--EeCCCCeech
Q psy9025 140 RPVLYLPGDYICRKGEVGKEMYIVKTGQVQVV--SGE-------TVLA--TLTEGSVFGE 188 (361)
Q Consensus 140 ~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~--~~~-------~~~~--~l~~Gd~fGe 188 (361)
....+.||......-..+..+++|.+|+..+. ..+ .... .+.+||+|-.
T Consensus 37 ~~~~i~pg~~~~Ph~h~a~~i~~V~~G~~~~~~v~~~~~~~~~~~~~~~v~l~~Gdv~~v 96 (144)
T PF00190_consen 37 RRVLIEPGGLRAPHYHNADEIVYVIEGRGRVGVVGPGGPQEEFRDFSQKVRLKAGDVFVV 96 (144)
T ss_dssp EEEEEETTEEEEEEEESSEEEEEEEESEEEEEEEETTCSSSEEEEEEEEEEEETTEEEEE
T ss_pred EeeehhcCCccceeEeeeeEEeeeeccceEEEEEecCCccccceeeeceeeeecccceee
Confidence 34455787776654447889999999999864 221 2333 4999999854
No 228
>KOG0033|consensus
Probab=24.54 E-value=8.2 Score=34.43 Aligned_cols=59 Identities=7% Similarity=0.039 Sum_probs=37.0
Q ss_pred cCcccccCcccc----cccccccccccCchhhhh--------hhccCCCCCCCC----ccceeehhhhhhhhccccC
Q psy9025 300 GSKSLNKRPHRR----VNRSASADTYFHPKQQRR--------LLHQTPTGHNNS----FECQVTVHREDIHESHITS 360 (361)
Q Consensus 300 ~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~--------~~~~~~~~~~~~----~~a~v~~a~~~lH~~~i~~ 360 (361)
.|-+|-..+.+| +..|++...|.|+..+.. +..... ..|. +.-++++|+.|-|.+|||-
T Consensus 59 rEarIC~~LqHP~IvrL~~ti~~~~~~ylvFe~m~G~dl~~eIV~R~~--ySEa~aSH~~rQiLeal~yCH~n~IvH 133 (355)
T KOG0033|consen 59 REARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREF--YSEADASHCIQQILEALAYCHSNGIVH 133 (355)
T ss_pred HHHHHHHhcCCCcEeehhhhhcccceeEEEEecccchHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhcCcee
Confidence 344443445566 566888889988886533 111011 1121 2567899999999999983
No 229
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=24.12 E-value=9.3 Score=34.23 Aligned_cols=17 Identities=24% Similarity=0.122 Sum_probs=15.3
Q ss_pred cceeehhhhhhhhcccc
Q psy9025 343 ECQVTVHREDIHESHIT 359 (361)
Q Consensus 343 ~a~v~~a~~~lH~~~i~ 359 (361)
+-.++.|+.|||+.||+
T Consensus 109 ~~qi~~~L~~LH~~~i~ 125 (282)
T cd06643 109 CKQTLEALNYLHENKII 125 (282)
T ss_pred HHHHHHHHHHHHHCCee
Confidence 67789999999999986
No 230
>COG3837 Uncharacterized conserved protein, contains double-stranded beta-helix domain [Function unknown]
Probab=23.84 E-value=4.2e+02 Score=21.90 Aligned_cols=48 Identities=15% Similarity=0.135 Sum_probs=32.8
Q ss_pred EEeCCCC--EEEeCCCCCCeEEEEEeeEEEEEeCcEEEEEeCCCCeechhh
Q psy9025 142 VLYLPGD--YICRKGEVGKEMYIVKTGQVQVVSGETVLATLTEGSVFGEIS 190 (361)
Q Consensus 142 ~~~~~ge--~I~~~G~~~~~ly~I~~G~v~v~~~~~~~~~l~~Gd~fGe~~ 190 (361)
..++||- ....--...+.|++|++|...+.-+.. ...+++||+.|..+
T Consensus 47 ~~v~PG~~Ss~~H~Hs~edEfv~ILeGE~~l~~d~~-e~~lrpGD~~gFpA 96 (161)
T COG3837 47 EIVEPGGESSLRHWHSAEDEFVYILEGEGTLREDGG-ETRLRPGDSAGFPA 96 (161)
T ss_pred EEeCCCCccccccccccCceEEEEEcCceEEEECCe-eEEecCCceeeccC
Confidence 3444443 333444556889999999998873332 35689999998876
No 231
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=23.76 E-value=11 Score=34.26 Aligned_cols=58 Identities=9% Similarity=-0.041 Sum_probs=34.4
Q ss_pred cCcccccCcccc----cccccccccccCchhhhh-------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 300 GSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 300 ~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
.|-.++..++++ +...+.+...+|+.++.+ .+.+.. +++.. ...++.|++|||+.||+
T Consensus 65 ~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~--l~~~~~~~i~~~l~~al~~LH~~~i~ 137 (296)
T cd06655 65 NEILVMKELKNPNIVNFLDSFLVGDELFVVMEYLAGGSLTDVVTETC--MDEAQIAAVCRECLQALEFLHANQVI 137 (296)
T ss_pred HHHHHHHhcCCCceeeeeeeEecCceEEEEEEecCCCcHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 344444445554 334555666666666655 223222 44442 66788999999999985
No 232
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=23.61 E-value=10 Score=34.25 Aligned_cols=45 Identities=11% Similarity=-0.020 Sum_probs=27.4
Q ss_pred ccccccccCchhhhh-------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 315 SASADTYFHPKQQRR-------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 315 t~~d~~~~~~l~~~~-------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
.+.+..+.++.++.+ ++.+...++++.. ..+++.++.|||+.||+
T Consensus 77 ~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~ 132 (292)
T cd06644 77 AFYWDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKII 132 (292)
T ss_pred EEEeCCeEEEEEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCee
Confidence 444455556565544 2221222245542 78888999999999986
No 233
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=23.23 E-value=6.9 Score=34.53 Aligned_cols=17 Identities=24% Similarity=0.255 Sum_probs=15.5
Q ss_pred cceeehhhhhhhhcccc
Q psy9025 343 ECQVTVHREDIHESHIT 359 (361)
Q Consensus 343 ~a~v~~a~~~lH~~~i~ 359 (361)
+..++.|+.|||+.||+
T Consensus 112 ~~~l~~~l~~lh~~~i~ 128 (267)
T cd08224 112 FVQLCSALEHMHSKRIM 128 (267)
T ss_pred HHHHHHHHHHHHhCCEe
Confidence 77899999999999985
No 234
>KOG1758|consensus
Probab=23.14 E-value=3.1e+02 Score=22.39 Aligned_cols=31 Identities=6% Similarity=0.069 Sum_probs=20.6
Q ss_pred CceeeEEEecceEEEEEEeHHHHHHHHHHCH
Q psy9025 198 NRRTADVRSHGFSNLFVLNKDDLNEAIEYYP 228 (361)
Q Consensus 198 ~~~~~~v~A~~~~~~~~l~~~~f~~ll~~~p 228 (361)
.....++.|.+-..+=.|+...-++++..+.
T Consensus 99 ~ds~~~ila~EA~~ledid~~~a~q~Le~aq 129 (159)
T KOG1758|consen 99 ADSSLQILAEEAVKLEDIDPSEAQQLLEKAQ 129 (159)
T ss_pred CCCeEEEEehhccccccCCHHHHHHHHHHHH
Confidence 4455667777767777777777777766544
No 235
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=23.03 E-value=15 Score=33.23 Aligned_cols=17 Identities=12% Similarity=-0.034 Sum_probs=15.5
Q ss_pred cceeehhhhhhhhcccc
Q psy9025 343 ECQVTVHREDIHESHIT 359 (361)
Q Consensus 343 ~a~v~~a~~~lH~~~i~ 359 (361)
...++.|+.|||+.||+
T Consensus 122 ~~qi~~aL~~LH~~~i~ 138 (302)
T cd07864 122 MKQLLEGLNYCHKKNFL 138 (302)
T ss_pred HHHHHHHHHHHHhCCee
Confidence 77889999999999986
No 236
>PF07545 Vg_Tdu: Vestigial/Tondu family; InterPro: IPR011520 The mammalian TEF and the Drosophila scalloped genes belong to a conserved family of transcriptional factors that possesses a TEA/ATTS DNA-binding domain. Transcriptional activation by these proteins likely requires interactions with specific coactivators. In Drosophila, Scalloped (Sd) interacts with Vestigial (Vg) to form a complex, which binds DNA through the Sd TEA/ATTS domain. The Sd-Vg heterodimer is a key regulator of wing development, which directly controls several target genes and is able to induce wing outgrowth when ectopically expressed. This short conserved region is needed for interaction with Sd [].; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus; PDB: 4EAZ_C.
Probab=22.94 E-value=55 Score=19.10 Aligned_cols=18 Identities=44% Similarity=0.446 Sum_probs=14.0
Q ss_pred ecceeeeehhhHHHHHhh
Q psy9025 18 KESVPEQVRGDIESGVDE 35 (361)
Q Consensus 18 g~~vfayiiG~i~s~~~~ 35 (361)
.|-+|.|.-|.+++++++
T Consensus 6 ~cVvfTy~~Gd~~s~VDe 23 (33)
T PF07545_consen 6 RCVVFTYFQGDIASVVDE 23 (33)
T ss_dssp TEEEEE-SSS-HHHHHHH
T ss_pred cEEEEEEEcCchHHHHHH
Confidence 578999999999999876
No 237
>KOG0661|consensus
Probab=22.87 E-value=19 Score=35.21 Aligned_cols=80 Identities=11% Similarity=-0.014 Sum_probs=49.5
Q ss_pred CcchhHHHhhcccCcccchhhhccC-cccccCcccc----ccccccccc-ccCchhhhh------hhccCCCCCCCCc--
Q psy9025 277 PKLLPIVMQVVPQNSMASKLLRCGS-KSLNKRPHRR----VNRSASADT-YFHPKQQRR------LLHQTPTGHNNSF-- 342 (361)
Q Consensus 277 ~~~l~~~~~~i~~~~~~~~vl~~~e-k~i~~~~~~~----~~~t~~d~~-~~~~l~~~~------~~~~~~~~~~~~~-- 342 (361)
..++|++|++..+- +..+...| |.|++--.++ +-..+.|+. .+|+.+|+. ++..+.+-|.|+-
T Consensus 37 ~VAIK~MK~Kf~s~---ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fVfE~Md~NLYqLmK~R~r~fse~~ir 113 (538)
T KOG0661|consen 37 LVAIKKMKKKFYSW---EECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFVFEFMDCNLYQLMKDRNRLFSESDIR 113 (538)
T ss_pred eeeHHHHHhhhccH---HHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeeeHHhhhhhHHHHHhhcCCcCCHHHHH
Confidence 45677776666551 11222333 3333332244 556788887 888888765 4443444477773
Q ss_pred --cceeehhhhhhhhcccc
Q psy9025 343 --ECQVTVHREDIHESHIT 359 (361)
Q Consensus 343 --~a~v~~a~~~lH~~~i~ 359 (361)
--+++.++.+||++|+-
T Consensus 114 nim~QilqGL~hiHk~GfF 132 (538)
T KOG0661|consen 114 NIMYQILQGLAHIHKHGFF 132 (538)
T ss_pred HHHHHHHHHHHHHHhcCcc
Confidence 67889999999999973
No 238
>PF10047 DUF2281: Protein of unknown function (DUF2281); InterPro: IPR018739 This domain is found in putative uncharacterised proteins, though some proteins contaning this domain are described as a transcritional regulator of the Xre family.
Probab=22.60 E-value=71 Score=22.00 Aligned_cols=25 Identities=12% Similarity=0.263 Sum_probs=20.9
Q ss_pred HHHHHHhhHHHHHHHHHHHhCCCCC
Q psy9025 57 IRHLAHVFTERAQKIKRILDFPPTP 81 (361)
Q Consensus 57 ~~~~~~~~~~l~~~i~~y~~~~~~~ 81 (361)
...++++|.+++..|..|.+|.+..
T Consensus 6 ~~~i~~LP~~~~~Evldfi~fL~~k 30 (66)
T PF10047_consen 6 LEKIQQLPEELQQEVLDFIEFLLQK 30 (66)
T ss_pred HHHHHHCCHHHHHHHHHHHHHHHHh
Confidence 4566789999999999999998763
No 239
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=22.59 E-value=12 Score=33.14 Aligned_cols=17 Identities=0% Similarity=-0.119 Sum_probs=15.1
Q ss_pred cceeehhhhhhhhcccc
Q psy9025 343 ECQVTVHREDIHESHIT 359 (361)
Q Consensus 343 ~a~v~~a~~~lH~~~i~ 359 (361)
..+++.|+.|||++||+
T Consensus 112 ~~~i~~~l~~lH~~~i~ 128 (267)
T cd05066 112 LRGIASGMKYLSDMGYV 128 (267)
T ss_pred HHHHHHHHHHHHHCCEe
Confidence 56788999999999986
No 240
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=22.23 E-value=13 Score=33.84 Aligned_cols=58 Identities=5% Similarity=-0.054 Sum_probs=34.5
Q ss_pred cCcccccCcccc----cccccccccccCchhhhh-------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 300 GSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 300 ~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
.|-.++..++++ +...+.++.+.|+.++.+ ++.+.. +++.. +..++.|+.|||+.||+
T Consensus 65 ~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~l~~~L~~LH~~~i~ 137 (297)
T cd06656 65 NEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC--MDEGQIAAVCRECLQALDFLHSNQVI 137 (297)
T ss_pred HHHHHHHhCCCCCEeeEEEEEecCCEEEEeecccCCCCHHHHHHhCC--CCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 344455555555 333555666677776654 222222 33332 66788999999999986
No 241
>KOG0574|consensus
Probab=22.13 E-value=13 Score=34.13 Aligned_cols=57 Identities=7% Similarity=-0.039 Sum_probs=38.2
Q ss_pred cCcccccCcccc-c---ccccccccccCchhhhh-------hhccCCCCCCCCccc----eeehhhhhhhhc
Q psy9025 300 GSKSLNKRPHRR-V---NRSASADTYFHPKQQRR-------LLHQTPTGHNNSFEC----QVTVHREDIHES 356 (361)
Q Consensus 300 ~ek~i~~~~~~~-~---~~t~~d~~~~~~l~~~~-------~~~~~~~~~~~~~~a----~v~~a~~~lH~~ 356 (361)
.|-.||.+|.++ | |..|=-.+.+.+.|+.| +++-+.+-+.|.-.| ..+-+++|||.-
T Consensus 77 KEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~ 148 (502)
T KOG0574|consen 77 KEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDL 148 (502)
T ss_pred HHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHH
Confidence 567889999988 2 44665666788999999 333222227776433 346789999963
No 242
>KOG0611|consensus
Probab=21.93 E-value=13 Score=35.61 Aligned_cols=81 Identities=4% Similarity=-0.013 Sum_probs=55.5
Q ss_pred CCCcchhHH-HhhcccCcccchhhhccCcccccCcccc----cccccccccccCchhhhh--------hhccCCCCCCCC
Q psy9025 275 QAPKLLPIV-MQVVPQNSMASKLLRCGSKSLNKRPHRR----VNRSASADTYFHPKQQRR--------LLHQTPTGHNNS 341 (361)
Q Consensus 275 ~~~~~l~~~-~~~i~~~~~~~~vl~~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~--------~~~~~~~~~~~~ 341 (361)
+...+++.+ +.+|.+...--|+ +.|-.||..+++| +|.-|-..+-+.+.|+.. +.+.+. +.|.
T Consensus 78 gR~VAiKsIrKdkIkdeqDlvhI--RREIeIMSsLNHPhII~IyEVFENkdKIvivMEYaS~GeLYDYiSer~~--LsEr 153 (668)
T KOG0611|consen 78 GREVAIKSIRKDKIKDEQDLVHI--RREIEIMSSLNHPHIIQIYEVFENKDKIVIVMEYASGGELYDYISERGS--LSER 153 (668)
T ss_pred CcEeehhhhhhhhcccHHHHHHH--HHHHHHHhhcCCCceeehhhhhcCCceEEEEEEecCCccHHHHHHHhcc--ccHH
Confidence 345567888 8888887777777 8999999999998 666666655444554433 112111 3333
Q ss_pred ----ccceeehhhhhhhhcccc
Q psy9025 342 ----FECQVTVHREDIHESHIT 359 (361)
Q Consensus 342 ----~~a~v~~a~~~lH~~~i~ 359 (361)
|--++|.|..|-|+.+++
T Consensus 154 EaRhfFRQIvSAVhYCHknrVv 175 (668)
T KOG0611|consen 154 EARHFFRQIVSAVHYCHKNRVV 175 (668)
T ss_pred HHHHHHHHHHHHHHHHhhccce
Confidence 356788999999999886
No 243
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=21.89 E-value=11 Score=34.96 Aligned_cols=59 Identities=10% Similarity=0.010 Sum_probs=33.6
Q ss_pred cCcccccCcccc----cccccccccccCchhhhh-------hhccCCCCCCCCc----cceeehhhhhhhhcc-cc
Q psy9025 300 GSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQTPTGHNNSF----ECQVTVHREDIHESH-IT 359 (361)
Q Consensus 300 ~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~-i~ 359 (361)
.|-.++..++++ ++..+.+...+++.++.| ++.+ ...+++.. +.+++.|+.|||+++ |+
T Consensus 52 ~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~~iv 126 (331)
T cd06649 52 RELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKE-AKRIPEEILGKVSIAVLRGLAYLREKHQIM 126 (331)
T ss_pred HHHHHHHHCCCCCCCeEEEEEEECCEEEEEeecCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHhhcCCEE
Confidence 344445555544 333455555666666655 2221 11255543 678999999999874 64
No 244
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=21.81 E-value=14 Score=32.65 Aligned_cols=17 Identities=24% Similarity=0.077 Sum_probs=14.9
Q ss_pred cceeehhhhhhhhcccc
Q psy9025 343 ECQVTVHREDIHESHIT 359 (361)
Q Consensus 343 ~a~v~~a~~~lH~~~i~ 359 (361)
+..++.|+.|||+.||+
T Consensus 114 ~~qi~~~l~~lH~~~i~ 130 (272)
T cd06629 114 TEQVLEGLAYLHSKGIL 130 (272)
T ss_pred HHHHHHHHHHHhhCCee
Confidence 66789999999999975
No 245
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=21.60 E-value=11 Score=32.97 Aligned_cols=45 Identities=9% Similarity=-0.130 Sum_probs=27.1
Q ss_pred ccccccccCchhhhh-------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 315 SASADTYFHPKQQRR-------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 315 t~~d~~~~~~l~~~~-------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
.+.+..++|+.++.+ ++......+++.- ...++.|+.|||+.||+
T Consensus 68 ~~~~~~~~~l~~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~ 123 (262)
T cd06613 68 SYLRRDKLWIVMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKI 123 (262)
T ss_pred EEEeCCEEEEEEeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCce
Confidence 445555566665544 2221111244442 77789999999999986
No 246
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=21.22 E-value=12 Score=33.93 Aligned_cols=43 Identities=12% Similarity=-0.003 Sum_probs=27.3
Q ss_pred ccccccccCchhhhh-------hhccCCCCCCCC----ccceeehhhhhhhhcccc
Q psy9025 315 SASADTYFHPKQQRR-------LLHQTPTGHNNS----FECQVTVHREDIHESHIT 359 (361)
Q Consensus 315 t~~d~~~~~~l~~~~-------~~~~~~~~~~~~----~~a~v~~a~~~lH~~~i~ 359 (361)
.+.++.+.++.++.+ ++.... +++. ++..++.|+.|||+.||+
T Consensus 85 ~~~~~~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~ql~~~l~~lH~~giv 138 (292)
T cd06657 85 SYLVGDELWVVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLKALSVLHAQGVI 138 (292)
T ss_pred EEEeCCEEEEEEecCCCCcHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 445555666666544 222222 3433 278899999999999986
No 247
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=21.16 E-value=28 Score=32.19 Aligned_cols=17 Identities=18% Similarity=0.022 Sum_probs=15.6
Q ss_pred cceeehhhhhhhhcccc
Q psy9025 343 ECQVTVHREDIHESHIT 359 (361)
Q Consensus 343 ~a~v~~a~~~lH~~~i~ 359 (361)
+..++.|++|||++||+
T Consensus 180 ~~qi~~aL~~LH~~~iv 196 (338)
T cd05102 180 SFQVARGMEFLASRKCI 196 (338)
T ss_pred HHHHHHHHHHHHHCCEE
Confidence 67899999999999986
No 248
>PF06052 3-HAO: 3-hydroxyanthranilic acid dioxygenase; InterPro: IPR010329 Members of this protein family, from both bacteria and eukaryotes, are the enzyme 3-hydroxyanthranilate 3,4-dioxygenase (1.13.11.6 from EC). It is part of the kynurenine pathway for the degradation of tryptophan and the biosynthesis of nicotinic acid [].The prokaryotic homologue is involved in the 2-nitrobenzoate degradation pathway []. The enzyme acts on the tryptophan metabolite 3-hydroxyanthranilate and produces 2-amino-3-carboxymuconate semialdehyde, which can rearrange spontaneously to quinolinic acid and feed into nicotinamide biosynthesis, or undergo further enzymatic degradation.; GO: 0000334 3-hydroxyanthranilate 3,4-dioxygenase activity, 0005506 iron ion binding, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 1ZVF_A 1YFX_A 1YFW_A 1YFY_A 1YFU_A 2QNK_A 3FE5_A.
Probab=20.87 E-value=3.6e+02 Score=22.09 Aligned_cols=55 Identities=13% Similarity=0.143 Sum_probs=30.7
Q ss_pred CCCeEEEEEeeEEEEE---eCcEEEEEeCCCCeechhhhhcccCCCceeeEEEecceEEEEEEeHH
Q psy9025 156 VGKEMYIVKTGQVQVV---SGETVLATLTEGSVFGEISLLALAGTNRRTADVRSHGFSNLFVLNKD 218 (361)
Q Consensus 156 ~~~~ly~I~~G~v~v~---~~~~~~~~l~~Gd~fGe~~ll~~~~~~~~~~~v~A~~~~~~~~l~~~ 218 (361)
+++.+|+-.+|...+. .++..-..+++|++|=-.+-. +.+-+-..+|..+++.+.
T Consensus 52 e~eE~FyQ~kG~m~Lkv~e~g~~kdi~I~EGe~fLLP~~v--------pHsP~R~~~tiGLViEr~ 109 (151)
T PF06052_consen 52 ETEEFFYQLKGDMCLKVVEDGKFKDIPIREGEMFLLPANV--------PHSPQRPADTIGLVIERK 109 (151)
T ss_dssp SS-EEEEEEES-EEEEEEETTEEEEEEE-TTEEEEE-TT----------EEEEE-TT-EEEEEEE-
T ss_pred CcceEEEEEeCcEEEEEEeCCceEEEEeCCCcEEecCCCC--------CCCCcCCCCcEEEEEEec
Confidence 4558889999977765 344556778999988433322 223333468888888765
No 249
>KOG0194|consensus
Probab=20.82 E-value=16 Score=35.90 Aligned_cols=62 Identities=8% Similarity=0.018 Sum_probs=41.6
Q ss_pred ccCcccccCcccc----cccccccccccCchhhhh-------hhccCCCCCC--CC--ccceeehhhhhhhhccccC
Q psy9025 299 CGSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQTPTGHN--NS--FECQVTVHREDIHESHITS 360 (361)
Q Consensus 299 ~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~~~~~~~--~~--~~a~v~~a~~~lH~~~i~~ 360 (361)
..|-++|..++++ ++.-..++.=+|++||-| .|.+.+..++ |- |......+++|||++++|-
T Consensus 209 m~EArvMr~l~H~NVVr~yGVa~~~~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IH 285 (474)
T KOG0194|consen 209 MKEARVMRQLNHPNVVRFYGVAVLEEPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNCIH 285 (474)
T ss_pred HHHHHHHHhCCCCCEEEEEEEEcCCCccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCCcc
Confidence 6788899998888 444555555577788888 4554331111 11 3566667999999999873
No 250
>TIGR02272 gentisate_1_2 gentisate 1,2-dioxygenase. This family consists of gentisate 1,2-dioxygenases. This ring-opening enzyme acts in salicylate degradation that goes via gentisate rather than via catechol. It converts gentisate to maleylpyruvate. Some putative gentisate 1,2-dioxygenases are excluded by a relatively high trusted cutoff score because they are too closely related to known examples of 1-hydroxy-2-naphthoate dioxygenase. Therefore some homologs may be bona fide gentisate 1,2-dioxygenases even if they score below the given cutoffs.
Probab=20.72 E-value=4.2e+02 Score=24.93 Aligned_cols=75 Identities=17% Similarity=0.180 Sum_probs=49.4
Q ss_pred EEeCCCCEEEeCCCCCCeEEEEEeeEEEEEeCcEEEEEeCCCCeechhhhhcccCCCceeeEEEecceEEEEEEeHHHHH
Q psy9025 142 VLYLPGDYICRKGEVGKEMYIVKTGQVQVVSGETVLATLTEGSVFGEISLLALAGTNRRTADVRSHGFSNLFVLNKDDLN 221 (361)
Q Consensus 142 ~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~~~~~~~~l~~Gd~fGe~~ll~~~~~~~~~~~v~A~~~~~~~~l~~~~f~ 221 (361)
..+.+|..--..-..+..+|+|.+|.-...-++.. -..++||+|--.+.- ..+..+.+++.++.++-.-+.
T Consensus 255 q~L~~G~~t~~~r~T~s~Vf~VieG~G~s~ig~~~-~~W~~gD~f~vPsW~--------~~~h~a~~da~Lf~~~D~Pll 325 (335)
T TIGR02272 255 QLLPKGFRTATYRSTDATVFCVVEGRGQVRIGDAV-FRFSPKDVFVVPSWH--------PVRFEASDDAVLFSFSDRPVQ 325 (335)
T ss_pred hccCCCCCCCCccccccEEEEEEeCeEEEEECCEE-EEecCCCEEEECCCC--------cEecccCCCeEEEEecCHHHH
Confidence 44555554444445568899999999888755543 468999999765532 122334567778888777666
Q ss_pred HHHH
Q psy9025 222 EAIE 225 (361)
Q Consensus 222 ~ll~ 225 (361)
+-++
T Consensus 326 ~~LG 329 (335)
T TIGR02272 326 QKLG 329 (335)
T ss_pred HHhc
Confidence 6554
No 251
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=20.20 E-value=20 Score=31.79 Aligned_cols=17 Identities=24% Similarity=0.178 Sum_probs=15.5
Q ss_pred cceeehhhhhhhhcccc
Q psy9025 343 ECQVTVHREDIHESHIT 359 (361)
Q Consensus 343 ~a~v~~a~~~lH~~~i~ 359 (361)
+..++.++.|||+.||+
T Consensus 107 ~~~i~~~l~~lh~~~i~ 123 (277)
T cd06917 107 IREVLVALKYIHKVGVI 123 (277)
T ss_pred HHHHHHHHHHHHhCCcc
Confidence 77899999999999986
Done!