Query psy9025
Match_columns 361
No_of_seqs 418 out of 3167
Neff 9.2
Searched_HMMs 29240
Date Fri Aug 16 17:06:40 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9025.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9025hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ukn_A Novel protein similar t 100.0 2.3E-31 7.9E-36 232.4 14.3 193 30-243 1-201 (212)
2 3bpz_A Potassium/sodium hyperp 100.0 1.7E-30 5.8E-35 225.2 18.6 175 61-246 25-199 (202)
3 2ptm_A Hyperpolarization-activ 100.0 2.2E-30 7.5E-35 223.8 18.8 172 61-243 24-196 (198)
4 4f8a_A Potassium voltage-gated 99.9 2E-23 6.7E-28 173.3 17.1 140 95-237 6-147 (160)
5 3ocp_A PRKG1 protein; serine/t 99.9 1E-21 3.5E-26 159.2 13.4 131 100-233 7-137 (139)
6 3gyd_A CNMP-BD protein, cyclic 99.9 6.7E-21 2.3E-25 162.7 16.4 152 94-248 13-177 (187)
7 3mdp_A Cyclic nucleotide-bindi 99.9 9.9E-21 3.4E-25 153.5 15.8 126 115-243 5-138 (142)
8 2pqq_A Putative transcriptiona 99.8 2E-20 6.9E-25 152.9 15.4 131 115-248 4-139 (149)
9 1vp6_A CNBD, cyclic-nucleotide 99.8 2.5E-20 8.4E-25 150.6 15.2 128 113-245 8-135 (138)
10 2z69_A DNR protein; beta barre 99.8 7.9E-20 2.7E-24 150.3 16.0 128 114-244 10-143 (154)
11 4ev0_A Transcription regulator 99.8 2.7E-19 9.1E-24 155.7 17.5 127 118-247 1-132 (216)
12 3dn7_A Cyclic nucleotide bindi 99.8 1.3E-19 4.3E-24 155.3 14.9 132 114-248 5-142 (194)
13 3pna_A CAMP-dependent protein 99.8 1.2E-19 4E-24 149.8 13.8 120 111-233 33-152 (154)
14 3idb_B CAMP-dependent protein 99.8 1E-19 3.5E-24 151.2 13.1 124 106-232 28-155 (161)
15 3fx3_A Cyclic nucleotide-bindi 99.8 2.8E-19 9.7E-24 158.0 16.8 134 112-248 7-145 (237)
16 3e97_A Transcriptional regulat 99.8 3.3E-19 1.1E-23 157.0 16.3 131 115-248 5-140 (231)
17 3d0s_A Transcriptional regulat 99.8 2.7E-19 9.2E-24 157.1 14.0 131 115-248 5-140 (227)
18 3dv8_A Transcriptional regulat 99.8 1E-18 3.5E-23 152.5 17.2 129 116-247 3-138 (220)
19 1zyb_A Transcription regulator 99.8 9.6E-19 3.3E-23 154.3 17.0 133 113-248 15-155 (232)
20 3shr_A CGMP-dependent protein 99.8 6.6E-19 2.3E-23 161.3 15.6 134 96-232 19-152 (299)
21 3iwz_A CAP-like, catabolite ac 99.8 2.7E-18 9.3E-23 150.8 17.0 131 115-248 10-151 (230)
22 2gau_A Transcriptional regulat 99.8 2.4E-18 8.1E-23 151.5 16.3 126 120-248 14-144 (232)
23 3dkw_A DNR protein; CRP-FNR, H 99.8 4.6E-19 1.6E-23 155.5 11.2 129 115-246 8-142 (227)
24 4ava_A Lysine acetyltransferas 99.8 4.2E-18 1.4E-22 158.3 16.6 127 115-245 12-142 (333)
25 3shr_A CGMP-dependent protein 99.8 1.8E-18 6.1E-23 158.4 13.9 135 111-248 152-292 (299)
26 2d93_A RAP guanine nucleotide 99.8 2.9E-19 9.9E-24 143.8 6.1 125 102-229 2-128 (134)
27 1wgp_A Probable cyclic nucleot 99.8 6.3E-19 2.2E-23 142.1 6.8 113 116-231 6-133 (137)
28 3ryp_A Catabolite gene activat 99.8 1.7E-17 5.9E-22 143.5 16.1 123 122-247 2-130 (210)
29 3of1_A CAMP-dependent protein 99.8 5.2E-18 1.8E-22 150.3 12.6 118 114-234 5-122 (246)
30 2qcs_B CAMP-dependent protein 99.8 1.3E-17 4.5E-22 151.8 15.4 128 106-236 29-156 (291)
31 3beh_A MLL3241 protein; transm 99.7 3.3E-20 1.1E-24 174.4 -3.0 127 115-246 227-353 (355)
32 2oz6_A Virulence factor regula 99.7 4E-17 1.4E-21 140.9 16.7 118 127-247 1-127 (207)
33 3of1_A CAMP-dependent protein 99.7 2.1E-17 7.3E-22 146.4 13.9 117 112-231 121-238 (246)
34 4din_B CAMP-dependent protein 99.7 1.7E-17 5.9E-22 157.2 14.0 127 106-235 120-246 (381)
35 1o5l_A Transcriptional regulat 99.7 3.3E-17 1.1E-21 142.5 12.9 126 120-248 3-134 (213)
36 3kcc_A Catabolite gene activat 99.7 9.4E-17 3.2E-21 144.1 15.8 121 125-248 55-181 (260)
37 2qcs_B CAMP-dependent protein 99.7 7.5E-17 2.6E-21 146.8 15.4 122 111-235 152-279 (291)
38 3tnp_B CAMP-dependent protein 99.7 5.4E-17 1.8E-21 155.5 14.5 123 106-231 135-261 (416)
39 2fmy_A COOA, carbon monoxide o 99.7 4E-17 1.4E-21 142.5 11.9 122 116-247 4-129 (220)
40 4din_B CAMP-dependent protein 99.7 3.8E-17 1.3E-21 154.8 11.5 127 111-240 243-375 (381)
41 3e6c_C CPRK, cyclic nucleotide 99.7 9.7E-17 3.3E-21 143.0 12.6 128 115-248 8-140 (250)
42 1o7f_A CAMP-dependent RAP1 gua 99.7 1.1E-16 3.6E-21 155.8 13.6 129 108-239 329-460 (469)
43 3tnp_B CAMP-dependent protein 99.7 7.3E-17 2.5E-21 154.5 12.2 128 115-245 266-404 (416)
44 1o7f_A CAMP-dependent RAP1 gua 99.7 9.8E-17 3.3E-21 156.0 12.5 130 100-233 26-162 (469)
45 1ft9_A Carbon monoxide oxidati 99.7 6.7E-17 2.3E-21 141.4 9.7 122 117-248 1-126 (222)
46 4f7z_A RAP guanine nucleotide 99.6 1.1E-15 3.7E-20 161.7 14.6 132 96-232 23-161 (999)
47 3la7_A Global nitrogen regulat 99.6 4E-15 1.4E-19 132.0 15.9 116 129-247 30-155 (243)
48 2bgc_A PRFA; bacterial infecti 99.6 4.8E-15 1.6E-19 131.0 15.5 119 125-247 2-130 (238)
49 3cf6_E RAP guanine nucleotide 99.6 5.9E-15 2E-19 149.3 13.7 132 96-231 13-147 (694)
50 4f7z_A RAP guanine nucleotide 99.6 1.3E-14 4.6E-19 153.5 14.6 114 111-227 332-448 (999)
51 3b02_A Transcriptional regulat 99.5 6.4E-14 2.2E-18 119.8 11.6 97 142-248 2-103 (195)
52 2zcw_A TTHA1359, transcription 99.4 4.6E-13 1.6E-17 115.0 9.5 101 135-246 1-108 (202)
53 4aw0_A HPDK1, 3-phosphoinositi 96.7 3E-05 1E-09 70.6 -6.0 79 277-359 59-154 (311)
54 3hyh_A Carbon catabolite-derep 95.5 0.00027 9.2E-09 63.2 -6.3 77 279-359 42-134 (275)
55 3ubd_A Ribosomal protein S6 ki 95.3 0.00058 2E-08 61.9 -4.6 59 299-359 74-148 (304)
56 4fih_A Serine/threonine-protei 94.7 0.0014 4.7E-08 60.5 -4.1 59 299-359 119-192 (346)
57 3v5w_A G-protein coupled recep 94.7 0.00088 3E-08 67.1 -5.8 96 260-359 188-314 (689)
58 4fie_A Serine/threonine-protei 94.2 0.002 7E-08 61.0 -4.2 59 299-359 196-269 (423)
59 4g3f_A NF-kappa-beta-inducing 93.7 0.0039 1.3E-07 57.2 -3.3 59 299-359 98-172 (336)
60 3v8s_A RHO-associated protein 93.3 0.0018 6.1E-08 61.3 -6.4 78 278-359 97-190 (410)
61 4b9d_A Serine/threonine-protei 92.8 0.0017 5.8E-08 60.0 -7.1 61 299-359 71-147 (350)
62 2r5t_A Serine/threonine-protei 91.4 0.013 4.6E-07 54.4 -3.0 77 279-359 67-161 (373)
63 4h33_A LMO2059 protein; bilaye 91.3 0.0064 2.2E-07 48.1 -4.5 38 3-40 63-103 (137)
64 4b99_A Mitogen-activated prote 90.9 0.0071 2.4E-07 56.9 -5.4 59 299-359 101-180 (398)
65 2vd5_A DMPK protein; serine/th 90.5 0.0041 1.4E-07 58.8 -7.5 80 278-359 89-184 (412)
66 1o6l_A RAC-beta serine/threoni 90.4 0.0068 2.3E-07 55.6 -5.9 79 277-359 32-127 (337)
67 1fot_A TPK1 delta, CAMP-depend 90.1 0.0071 2.4E-07 54.9 -6.0 80 277-359 33-128 (318)
68 1rdq_E PKA C-alpha, CAMP-depen 90.1 0.0074 2.5E-07 55.6 -6.0 77 279-359 70-163 (350)
69 3uto_A Twitchin; kinase, muscl 88.6 0.019 6.4E-07 56.7 -4.7 61 299-359 202-277 (573)
70 2acx_A G protein-coupled recep 88.5 0.012 4.1E-07 58.1 -6.1 81 277-359 211-308 (576)
71 4dc2_A Protein kinase C IOTA t 88.2 0.013 4.4E-07 55.1 -6.0 77 279-359 81-175 (396)
72 4aw2_A Serine/threonine-protei 88.2 0.011 3.9E-07 56.2 -6.4 68 290-359 115-197 (437)
73 2i0e_A Protein kinase C-beta I 87.4 0.016 5.6E-07 53.4 -5.6 65 291-359 62-143 (353)
74 4fr4_A YANK1, serine/threonine 87.3 0.016 5.4E-07 54.2 -5.9 66 291-359 57-137 (384)
75 3fjs_A Uncharacterized protein 87.3 5.4 0.00018 29.6 9.6 67 139-214 38-104 (114)
76 3a8x_A Protein kinase C IOTA t 86.9 0.012 4.1E-07 54.1 -6.9 59 299-359 57-132 (345)
77 2ozj_A Cupin 2, conserved barr 86.5 4.1 0.00014 30.0 8.5 66 141-215 42-107 (114)
78 3txo_A PKC-L, NPKC-ETA, protei 86.4 0.013 4.4E-07 54.0 -7.0 59 299-359 71-146 (353)
79 3rns_A Cupin 2 conserved barre 86.3 4.2 0.00014 34.4 9.5 68 139-215 39-106 (227)
80 3pjs_K KCSA, voltage-gated pot 86.3 0.17 5.9E-06 41.1 0.6 40 3-42 87-129 (166)
81 1xjd_A Protein kinase C, theta 85.7 0.013 4.5E-07 53.8 -7.2 59 299-359 65-140 (345)
82 4asz_A BDNF/NT-3 growth factor 84.9 0.067 2.3E-06 48.1 -2.8 61 299-359 63-150 (299)
83 4g31_A Eukaryotic translation 84.7 0.075 2.6E-06 47.7 -2.6 60 299-359 51-140 (299)
84 3fpq_A Serine/threonine-protei 83.7 0.05 1.7E-06 48.7 -4.2 59 299-359 73-153 (290)
85 4f9c_A Cell division cycle 7-r 83.6 0.04 1.4E-06 51.0 -5.1 57 299-359 67-139 (361)
86 3ibm_A Cupin 2, conserved barr 82.7 11 0.00037 30.2 10.0 89 139-234 58-157 (167)
87 4aoj_A High affinity nerve gro 81.6 0.12 4.2E-06 47.0 -2.5 61 299-359 91-180 (329)
88 3c4z_A Rhodopsin kinase; Ser/T 81.4 0.041 1.4E-06 53.9 -6.2 81 277-359 212-311 (543)
89 1yhf_A Hypothetical protein SP 81.4 13 0.00045 27.0 9.7 68 139-215 42-109 (115)
90 2fqp_A Hypothetical protein BP 81.2 3.9 0.00013 29.2 6.2 49 140-188 21-71 (97)
91 3omv_A RAF proto-oncogene seri 80.9 0.16 5.6E-06 45.7 -1.9 60 299-359 80-154 (307)
92 3pfq_A PKC-B, PKC-beta, protei 80.7 0.059 2E-06 54.2 -5.4 96 260-359 340-464 (674)
93 3lwc_A Uncharacterized protein 80.5 15 0.0005 27.5 9.4 48 140-189 43-90 (119)
94 3eff_K Voltage-gated potassium 78.7 0.4 1.4E-05 37.6 -0.1 37 3-39 60-99 (139)
95 3nyv_A Calmodulin-domain prote 78.4 0.094 3.2E-06 50.3 -4.7 59 299-359 74-148 (484)
96 3jzv_A Uncharacterized protein 78.2 9.8 0.00033 30.5 8.2 88 141-235 57-154 (166)
97 4azs_A Methyltransferase WBDD; 78.2 0.15 5.2E-06 50.1 -3.3 59 299-359 289-361 (569)
98 3niz_A Rhodanese family protei 77.7 0.056 1.9E-06 48.5 -6.1 61 299-359 67-141 (311)
99 4ejn_A RAC-alpha serine/threon 77.5 0.15 5.2E-06 48.3 -3.4 59 299-359 196-271 (446)
100 1ob3_A PFPK5, cell division co 77.5 0.11 3.7E-06 45.9 -4.2 61 299-359 48-122 (288)
101 3es1_A Cupin 2, conserved barr 76.9 3.3 0.00011 33.6 5.0 48 139-186 81-128 (172)
102 2pfw_A Cupin 2, conserved barr 76.3 19 0.00067 26.1 9.6 68 139-215 36-103 (116)
103 3h8u_A Uncharacterized conserv 76.2 7.2 0.00025 29.1 6.6 47 139-186 41-89 (125)
104 3vou_A ION transport 2 domain 75.3 0.35 1.2E-05 38.4 -1.3 32 3-34 72-106 (148)
105 3o0g_A Cell division protein k 74.2 0.077 2.6E-06 46.9 -6.1 61 299-359 49-123 (292)
106 4e2g_A Cupin 2 conserved barre 74.2 23 0.00078 26.2 9.1 78 139-225 43-124 (126)
107 2gu9_A Tetracenomycin polyketi 73.7 17 0.0006 26.0 8.1 48 139-187 23-73 (113)
108 1v70_A Probable antibiotics sy 73.4 20 0.00068 25.1 8.2 47 139-186 30-77 (105)
109 3kgz_A Cupin 2 conserved barre 73.3 14 0.00046 29.3 7.7 87 141-234 48-144 (156)
110 1o5u_A Novel thermotoga mariti 73.1 8.3 0.00028 28.0 5.9 48 139-188 33-80 (101)
111 2yab_A Death-associated protei 72.7 0.23 7.8E-06 45.7 -3.5 59 299-359 63-137 (361)
112 2f4p_A Hypothetical protein TM 71.1 12 0.00041 29.1 6.9 70 140-215 51-120 (147)
113 4gt4_A Tyrosine-protein kinase 71.1 0.27 9.2E-06 44.3 -3.3 61 299-359 77-167 (308)
114 3a62_A Ribosomal protein S6 ki 71.0 0.22 7.6E-06 44.9 -3.9 59 299-359 69-143 (327)
115 2y4i_B KSR2, HKSR2, kinase sup 71.0 0.98 3.3E-05 40.0 0.4 61 299-359 77-152 (319)
116 2y94_A 5'-AMP-activated protei 70.7 0.13 4.6E-06 49.3 -5.7 59 299-359 64-138 (476)
117 3gbz_A Kinase, CMGC CDK; ssgci 70.7 0.12 4.1E-06 46.7 -5.8 59 299-359 81-154 (329)
118 3h4j_B AMPK kdaid, SNF1-like p 70.1 0.15 5E-06 46.6 -5.4 59 299-359 57-130 (336)
119 3rns_A Cupin 2 conserved barre 70.0 25 0.00087 29.5 9.2 68 139-215 155-223 (227)
120 2bdw_A Hypothetical protein K1 69.3 0.29 1E-05 44.9 -3.6 59 299-359 76-150 (362)
121 3lij_A Calcium/calmodulin depe 68.1 0.15 5.1E-06 49.0 -6.1 59 299-359 84-158 (494)
122 2pyt_A Ethanolamine utilizatio 68.1 23 0.00077 27.1 7.7 46 141-189 61-106 (133)
123 3cok_A Serine/threonine-protei 68.0 0.16 5.4E-06 44.4 -5.5 61 299-359 59-134 (278)
124 3mwu_A Calmodulin-domain prote 68.0 0.13 4.5E-06 49.3 -6.5 59 299-359 69-143 (486)
125 2eue_A Carbon catabolite derep 67.4 0.13 4.5E-06 44.9 -6.2 59 299-359 61-134 (275)
126 3gni_B Strad alpha; kinase fol 67.3 0.11 3.8E-06 48.1 -7.0 61 299-359 74-150 (389)
127 2bnm_A Epoxidase; oxidoreducta 67.2 13 0.00044 30.3 6.6 67 141-215 121-196 (198)
128 2b8m_A Hypothetical protein MJ 66.7 9.8 0.00034 28.0 5.3 46 141-186 31-76 (117)
129 2qr7_A Ribosomal protein S6 ki 66.4 0.31 1.1E-05 44.3 -4.0 46 312-359 81-138 (342)
130 3rp9_A Mitogen-activated prote 65.7 0.16 5.5E-06 48.2 -6.3 60 299-359 100-178 (458)
131 1sfn_A Conserved hypothetical 65.6 28 0.00097 29.6 8.7 69 138-213 166-235 (246)
132 3kul_A Ephrin type-A receptor 65.5 0.51 1.8E-05 42.4 -2.7 61 299-359 98-173 (325)
133 1kob_A Twitchin; kinase, intra 65.5 0.47 1.6E-05 44.1 -3.0 60 300-359 97-171 (387)
134 2vpv_A Protein MIF2, MIF2P; nu 65.5 15 0.00052 29.5 6.4 67 142-215 93-161 (166)
135 3h7j_A Bacilysin biosynthesis 65.2 23 0.00078 30.1 8.0 48 141-189 149-197 (243)
136 4hcu_A Tyrosine-protein kinase 65.0 0.54 1.8E-05 40.7 -2.6 61 299-359 53-128 (269)
137 3soa_A Calcium/calmodulin-depe 64.0 0.43 1.5E-05 45.2 -3.6 59 299-359 58-132 (444)
138 2k1e_A Water soluble analogue 63.7 0.77 2.6E-05 33.9 -1.5 38 3-40 60-100 (103)
139 1tki_A Titin; serine kinase, m 63.7 0.38 1.3E-05 43.3 -4.0 61 299-359 49-124 (321)
140 2qol_A Ephrin receptor; recept 63.3 0.75 2.6E-05 42.3 -2.1 61 299-359 94-169 (373)
141 2qjv_A Uncharacterized IOLB-li 63.2 33 0.0011 29.8 8.5 78 137-217 29-110 (270)
142 3q5i_A Protein kinase; CDPK, m 63.2 0.41 1.4E-05 46.0 -4.0 46 312-359 111-168 (504)
143 3fe3_A MAP/microtubule affinit 62.9 0.41 1.4E-05 43.3 -3.9 58 300-359 63-136 (328)
144 3bcw_A Uncharacterized protein 62.8 6.8 0.00023 29.7 3.7 47 142-189 54-100 (123)
145 4b29_A Dimethylsulfoniopropion 62.7 11 0.00036 31.8 5.1 43 144-186 139-181 (217)
146 3mtl_A Cell division protein k 62.3 0.66 2.3E-05 41.6 -2.6 60 300-359 49-122 (324)
147 4fvq_A Tyrosine-protein kinase 61.9 0.45 1.5E-05 41.6 -3.8 60 300-359 61-135 (289)
148 3p23_A Serine/threonine-protei 61.8 0.77 2.6E-05 43.2 -2.3 60 300-359 66-140 (432)
149 3i7d_A Sugar phosphate isomera 60.9 23 0.00078 28.0 6.8 49 139-188 45-95 (163)
150 3zgw_A Maternal embryonic leuc 60.9 0.51 1.8E-05 43.1 -3.6 59 299-359 56-130 (347)
151 3fxz_A Serine/threonine-protei 60.8 0.35 1.2E-05 42.9 -4.7 59 299-359 65-138 (297)
152 1dgw_A Canavalin; duplicated s 60.7 11 0.00039 30.4 5.0 50 139-188 43-95 (178)
153 3es4_A Uncharacterized protein 60.5 5.5 0.00019 30.0 2.7 48 142-190 47-94 (116)
154 1ua2_A CAK, cell division prot 60.3 1 3.4E-05 40.8 -1.8 59 301-359 62-134 (346)
155 3l2h_A Putative sugar phosphat 60.3 22 0.00074 27.9 6.5 46 140-186 49-96 (162)
156 3s95_A LIMK-1, LIM domain kina 60.2 0.54 1.8E-05 41.7 -3.6 60 300-359 56-130 (310)
157 3fdn_A Serine/threonine-protei 59.9 0.22 7.4E-06 43.6 -6.2 59 299-359 57-131 (279)
158 2pmi_A Negative RE, cyclin-dep 59.3 0.75 2.6E-05 41.1 -2.8 61 299-359 51-130 (317)
159 2izr_A Casein kinase I isoform 59.1 0.29 1E-05 44.0 -5.6 61 299-359 52-127 (330)
160 2y0a_A Death-associated protei 59.0 0.46 1.6E-05 42.8 -4.3 60 299-359 62-136 (326)
161 1o4t_A Putative oxalate decarb 58.7 38 0.0013 25.5 7.5 46 140-186 60-106 (133)
162 3f3z_A Calcium/calmodulin-depe 58.3 0.51 1.8E-05 41.0 -4.0 58 300-359 55-128 (277)
163 2zv2_A Calcium/calmodulin-depe 58.2 0.49 1.7E-05 41.7 -4.2 17 343-359 143-159 (298)
164 1y9q_A Transcriptional regulat 58.1 45 0.0015 26.8 8.3 45 141-186 108-154 (192)
165 4eqm_A Protein kinase; transfe 58.1 0.7 2.4E-05 40.7 -3.2 57 301-359 61-133 (294)
166 3uqc_A Probable conserved tran 58.1 0.51 1.8E-05 41.6 -4.1 56 302-359 82-151 (286)
167 2q30_A Uncharacterized protein 57.9 43 0.0015 23.7 7.5 68 139-214 35-104 (110)
168 1vj2_A Novel manganese-contain 57.7 22 0.00076 26.5 5.9 45 141-186 52-96 (126)
169 2w4o_A Calcium/calmodulin-depe 56.4 0.69 2.4E-05 42.0 -3.6 59 299-359 96-170 (349)
170 2ih3_C Voltage-gated potassium 56.4 0.79 2.7E-05 35.0 -2.7 37 3-39 81-120 (122)
171 3cbl_A C-FES, proto-oncogene t 55.9 0.53 1.8E-05 43.3 -4.5 61 299-359 160-235 (377)
172 3d0j_A Uncharacterized protein 55.9 43 0.0015 25.9 7.1 59 152-218 45-110 (140)
173 3gen_A Tyrosine-protein kinase 55.7 0.73 2.5E-05 40.1 -3.5 61 299-359 67-142 (283)
174 2r3i_A Cell division protein k 55.2 0.49 1.7E-05 41.6 -4.7 60 300-359 51-125 (299)
175 3c0i_A Peripheral plasma membr 55.1 0.6 2.1E-05 42.5 -4.2 61 299-359 74-152 (351)
176 3kn6_A Ribosomal protein S6 ki 54.9 0.48 1.6E-05 42.6 -4.9 58 300-359 54-128 (325)
177 2i45_A Hypothetical protein; n 54.6 20 0.00067 25.7 5.0 67 145-219 36-102 (107)
178 1luf_A Muscle-specific tyrosin 54.6 0.94 3.2E-05 40.6 -3.0 17 343-359 180-196 (343)
179 2o1q_A Putative acetyl/propion 54.6 11 0.00038 29.4 3.7 70 139-215 46-116 (145)
180 2vgo_A Serine/threonine-protei 54.5 0.25 8.7E-06 43.2 -6.7 59 299-359 62-136 (284)
181 3t9t_A Tyrosine-protein kinase 54.0 1 3.5E-05 38.6 -2.7 60 300-359 52-126 (267)
182 3tki_A Serine/threonine-protei 53.0 0.6 2E-05 41.9 -4.6 58 301-359 55-127 (323)
183 1mqb_A Ephrin type-A receptor 52.8 1.1 3.7E-05 40.3 -2.9 60 300-359 95-169 (333)
184 3is5_A Calcium-dependent prote 52.5 0.99 3.4E-05 39.5 -3.1 59 299-359 68-146 (285)
185 1sfn_A Conserved hypothetical 52.4 63 0.0022 27.3 8.6 65 140-215 53-117 (246)
186 4i4a_A Similar to unknown prot 52.1 67 0.0023 23.5 9.4 79 140-225 37-117 (128)
187 2wei_A Calmodulin-domain prote 52.1 0.48 1.7E-05 41.5 -5.3 59 299-359 69-143 (287)
188 3uc3_A Serine/threonine-protei 52.0 0.77 2.6E-05 42.0 -4.1 58 300-359 65-138 (361)
189 2c30_A Serine/threonine-protei 51.5 0.99 3.4E-05 40.4 -3.4 59 299-359 90-163 (321)
190 3dls_A PAS domain-containing s 51.5 1.1 3.6E-05 40.5 -3.2 60 299-359 77-152 (335)
191 3cew_A Uncharacterized cupin p 50.6 57 0.0019 23.9 7.2 47 139-186 28-76 (125)
192 1lr5_A Auxin binding protein 1 50.2 35 0.0012 26.6 6.2 49 139-187 43-99 (163)
193 2h6d_A 5'-AMP-activated protei 50.2 0.41 1.4E-05 41.6 -6.0 58 300-359 60-133 (276)
194 4agu_A Cyclin-dependent kinase 50.2 0.72 2.5E-05 40.8 -4.5 58 301-359 52-124 (311)
195 3h7j_A Bacilysin biosynthesis 49.8 67 0.0023 27.0 8.4 47 139-186 36-82 (243)
196 3kfa_A Tyrosine-protein kinase 49.6 1.2 4E-05 38.8 -3.1 60 300-359 58-133 (288)
197 3c1x_A Hepatocyte growth facto 49.1 2.6 8.9E-05 38.7 -1.0 61 299-359 138-214 (373)
198 4axo_A EUTQ, ethanolamine util 48.7 55 0.0019 25.6 6.9 31 156-187 83-113 (151)
199 2q1z_B Anti-sigma factor CHRR, 48.6 34 0.0012 28.0 6.0 65 138-215 126-192 (195)
200 3dtc_A Mitogen-activated prote 48.6 1.2 4E-05 38.4 -3.3 43 313-357 72-125 (271)
201 3eb0_A Putative uncharacterize 48.5 1.3 4.6E-05 40.6 -3.0 43 317-359 108-163 (383)
202 2owb_A Serine/threonine-protei 48.5 0.97 3.3E-05 40.7 -3.9 57 301-359 91-163 (335)
203 1opk_A P150, C-ABL, proto-onco 48.4 1.3 4.3E-05 42.5 -3.3 61 299-359 264-340 (495)
204 3kk8_A Calcium/calmodulin depe 48.2 0.8 2.7E-05 39.8 -4.5 58 300-359 54-127 (284)
205 3kmu_A ILK, integrin-linked ki 48.2 2.8 9.5E-05 35.8 -0.9 61 299-359 55-135 (271)
206 2opk_A Hypothetical protein; p 48.2 39 0.0013 24.6 5.8 35 155-189 51-86 (112)
207 3sxs_A Cytoplasmic tyrosine-pr 48.1 0.55 1.9E-05 40.5 -5.5 60 300-359 52-126 (268)
208 3pg1_A Mitogen-activated prote 47.8 1.4 4.8E-05 39.9 -3.0 61 299-359 77-156 (362)
209 2x4f_A Myosin light chain kina 47.8 0.91 3.1E-05 41.8 -4.3 61 299-359 134-209 (373)
210 4e7w_A Glycogen synthase kinas 47.7 1.2 3.9E-05 41.3 -3.7 43 317-359 108-163 (394)
211 4aaa_A Cyclin-dependent kinase 47.4 1 3.4E-05 40.4 -4.0 60 300-359 73-146 (331)
212 1zvf_A 3-hydroxyanthranilate 3 47.3 46 0.0016 26.8 6.2 54 156-217 53-113 (176)
213 3a7i_A MST3 kinase, serine/thr 47.0 0.92 3.1E-05 40.0 -4.3 57 301-359 70-141 (303)
214 2ozo_A Tyrosine-protein kinase 47.0 1.9 6.4E-05 42.6 -2.4 60 299-359 384-458 (613)
215 2a2a_A Death-associated protei 47.0 0.77 2.6E-05 41.0 -4.9 59 300-359 64-137 (321)
216 3ebr_A Uncharacterized RMLC-li 46.9 25 0.00086 27.9 4.7 67 138-215 43-113 (159)
217 3f66_A Hepatocyte growth facto 46.8 2.1 7.1E-05 37.5 -2.0 60 300-359 75-150 (298)
218 2rku_A Serine/threonine-protei 46.5 1 3.5E-05 39.4 -4.0 57 301-359 65-137 (294)
219 3d82_A Cupin 2, conserved barr 46.1 58 0.002 22.5 6.4 50 158-216 51-100 (102)
220 2oa2_A BH2720 protein; 1017534 45.8 56 0.0019 25.0 6.7 47 140-186 46-98 (148)
221 1fi2_A Oxalate oxidase, germin 45.0 1.2E+02 0.0042 24.5 9.0 50 139-188 74-131 (201)
222 2vwi_A Serine/threonine-protei 44.9 3 0.0001 36.3 -1.2 61 299-359 61-143 (303)
223 3n9x_A Phosphotransferase; mal 44.9 1.5 5.1E-05 41.1 -3.4 39 320-359 103-151 (432)
224 4fl3_A Tyrosine-protein kinase 44.8 0.8 2.7E-05 45.6 -5.5 59 299-359 418-491 (635)
225 2jam_A Calcium/calmodulin-depe 44.6 1.2 4.1E-05 39.3 -3.9 43 315-359 74-128 (304)
226 1rc6_A Hypothetical protein YL 44.3 38 0.0013 29.0 6.0 69 141-216 63-133 (261)
227 3ork_A Serine/threonine protei 44.3 1.9 6.6E-05 38.1 -2.6 17 343-359 122-138 (311)
228 3og7_A AKAP9-BRAF fusion prote 43.9 2.3 7.8E-05 37.1 -2.2 17 343-359 126-142 (289)
229 1yfu_A 3-hydroxyanthranilate-3 43.7 32 0.0011 27.7 4.8 54 156-217 54-111 (174)
230 2xp1_A SPT6; transcription, IW 43.6 40 0.0014 27.3 5.5 37 120-162 13-49 (178)
231 3mi9_A Cell division protein k 43.6 0.64 2.2E-05 42.1 -6.0 60 300-359 65-146 (351)
232 2qkw_B Protein kinase; three-h 43.2 3.9 0.00013 36.2 -0.7 61 299-359 83-161 (321)
233 3l9p_A Anaplastic lymphoma kin 42.9 2.6 9E-05 38.4 -2.0 60 300-359 123-203 (367)
234 2vqa_A SLL1358 protein, MNCA; 42.9 73 0.0025 28.5 7.9 50 139-188 236-290 (361)
235 1j58_A YVRK protein; cupin, de 42.6 89 0.003 28.3 8.5 71 139-215 259-334 (385)
236 2vec_A YHAK, pirin-like protei 42.5 1.6E+02 0.0055 25.2 9.5 67 142-216 187-253 (256)
237 2h34_A Serine/threonine-protei 42.4 1.6 5.5E-05 38.6 -3.4 58 300-359 83-156 (309)
238 2j7t_A Serine/threonine-protei 42.1 1.2 4E-05 39.2 -4.4 59 301-359 66-139 (302)
239 3pls_A Macrophage-stimulating 42.1 2.3 8E-05 37.0 -2.4 17 343-359 130-146 (298)
240 2qnk_A 3-hydroxyanthranilate 3 42.0 53 0.0018 28.7 6.2 56 154-217 48-106 (286)
241 1vzo_A Ribosomal protein S6 ki 41.8 1.4 4.8E-05 40.0 -4.0 59 299-359 106-181 (355)
242 3bhy_A Death-associated protei 41.7 1.1 3.9E-05 38.8 -4.5 57 301-359 58-130 (283)
243 3bu7_A Gentisate 1,2-dioxygena 41.6 71 0.0024 29.4 7.5 79 140-225 297-376 (394)
244 2yex_A Serine/threonine-protei 41.4 1.2 4.1E-05 38.4 -4.4 58 301-359 55-127 (276)
245 4e2q_A Ureidoglycine aminohydr 41.4 38 0.0013 29.4 5.4 70 139-217 72-142 (266)
246 1k9a_A Carboxyl-terminal SRC k 41.1 1.6 5.4E-05 41.2 -3.9 61 299-359 234-311 (450)
247 3llt_A Serine/threonine kinase 40.6 1.5 5.1E-05 39.7 -4.1 17 343-359 143-159 (360)
248 1p4o_A Insulin-like growth fac 40.5 2.5 8.4E-05 37.4 -2.6 17 343-359 144-160 (322)
249 3ht1_A REMF protein; cupin fol 40.3 38 0.0013 25.5 4.9 44 143-187 45-90 (145)
250 1u5q_A Serine/threonine protei 40.3 1.2 4.1E-05 40.5 -4.7 58 300-359 103-176 (348)
251 3lb7_A RAF proto-oncogene seri 40.2 3.1 0.00011 36.7 -1.9 17 343-359 138-154 (307)
252 4e5w_A Tyrosine-protein kinase 39.2 1.4 4.7E-05 38.7 -4.4 17 343-359 132-148 (302)
253 1nxk_A MAP kinase-activated pr 39.2 2.6 8.7E-05 39.1 -2.7 17 343-359 167-183 (400)
254 1sef_A Conserved hypothetical 39.1 1.4E+02 0.0047 25.6 8.8 48 139-187 184-232 (274)
255 3oz6_A Mitogen-activated prote 38.9 3.2 0.00011 38.1 -2.1 17 343-359 115-131 (388)
256 1fvr_A Tyrosine-protein kinase 38.4 2.2 7.6E-05 38.0 -3.2 17 343-359 148-164 (327)
257 2rio_A Serine/threonine-protei 38.2 2 6.8E-05 40.3 -3.7 60 300-359 57-137 (434)
258 2wtk_C Serine/threonine-protei 37.9 2.4 8.3E-05 37.1 -3.0 61 299-359 54-131 (305)
259 3ouf_A Potassium channel prote 37.6 1.9 6.6E-05 31.3 -3.1 35 3-37 52-89 (97)
260 1sq4_A GLXB, glyoxylate-induce 37.4 42 0.0014 29.2 5.1 69 141-216 72-142 (278)
261 3bu7_A Gentisate 1,2-dioxygena 36.7 24 0.00082 32.6 3.5 48 140-187 126-173 (394)
262 2d40_A Z3393, putative gentisa 36.1 55 0.0019 29.6 5.8 75 139-220 102-177 (354)
263 2cav_A Protein (canavalin); vi 35.8 40 0.0014 31.7 4.9 50 139-188 88-140 (445)
264 3eqc_A Dual specificity mitoge 35.7 3 0.0001 37.7 -2.8 59 299-359 79-154 (360)
265 1uij_A Beta subunit of beta co 35.7 38 0.0013 31.5 4.7 49 139-187 51-102 (416)
266 3dbq_A Dual specificity protei 35.6 4 0.00014 36.6 -2.0 17 343-359 114-130 (343)
267 2vuw_A Serine/threonine-protei 35.6 5 0.00017 35.7 -1.3 17 343-359 167-184 (336)
268 3lxp_A Non-receptor tyrosine-p 35.3 2 6.7E-05 38.2 -4.1 17 343-359 140-156 (318)
269 2clq_A Mitogen-activated prote 35.3 2.9 9.8E-05 36.4 -2.9 60 300-359 68-144 (295)
270 3com_A Serine/threonine-protei 35.1 1.6 5.5E-05 38.5 -4.7 59 299-359 72-147 (314)
271 2vqa_A SLL1358 protein, MNCA; 35.0 1.2E+02 0.0042 27.0 8.1 49 139-187 54-107 (361)
272 1y3t_A Hypothetical protein YX 34.9 77 0.0026 27.9 6.6 47 140-187 49-96 (337)
273 2ea7_A 7S globulin-1; beta bar 34.9 40 0.0014 31.5 4.8 50 138-187 62-114 (434)
274 3myx_A Uncharacterized protein 34.8 38 0.0013 28.9 4.2 33 157-189 186-218 (238)
275 1cm8_A Phosphorylated MAP kina 34.7 2.4 8.1E-05 38.7 -3.7 17 343-359 134-150 (367)
276 2o8q_A Hypothetical protein; c 34.6 45 0.0015 24.9 4.3 30 158-187 65-94 (134)
277 3i6u_A CDS1, serine/threonine- 34.5 2.5 8.7E-05 39.4 -3.6 58 299-359 188-261 (419)
278 2i6l_A Mitogen-activated prote 34.3 5.5 0.00019 34.9 -1.3 17 343-359 126-142 (320)
279 1sq4_A GLXB, glyoxylate-induce 34.1 70 0.0024 27.7 6.0 48 138-186 192-240 (278)
280 1sef_A Conserved hypothetical 33.8 52 0.0018 28.4 5.1 68 141-215 66-135 (274)
281 2ac3_A MAP kinase-interacting 33.4 3.5 0.00012 36.3 -2.7 44 314-359 78-133 (316)
282 3ldc_A Calcium-gated potassium 32.5 2.3 7.9E-05 29.8 -3.3 31 3-33 48-81 (82)
283 3op5_A Serine/threonine-protei 32.3 4 0.00014 37.0 -2.6 17 343-359 158-174 (364)
284 2nru_A Interleukin-1 receptor- 31.9 3.2 0.00011 36.4 -3.3 17 343-359 139-155 (307)
285 3p86_A Serine/threonine-protei 31.8 2.2 7.6E-05 37.8 -4.3 60 300-359 83-161 (309)
286 1phk_A Phosphorylase kinase; g 31.7 1.8 6.2E-05 37.8 -4.9 44 314-359 91-146 (298)
287 1j58_A YVRK protein; cupin, de 31.3 73 0.0025 28.9 5.9 49 139-187 81-133 (385)
288 2d5f_A Glycinin A3B4 subunit; 30.9 86 0.0029 29.8 6.4 57 132-188 362-424 (493)
289 3m2w_A MAP kinase-activated pr 30.9 4.6 0.00016 35.3 -2.4 17 343-359 123-139 (299)
290 3lm5_A Serine/threonine-protei 30.3 4.8 0.00016 35.8 -2.4 17 343-359 137-153 (327)
291 1fxz_A Glycinin G1; proglycini 30.2 82 0.0028 29.8 6.1 50 138-187 339-394 (476)
292 3lag_A Uncharacterized protein 30.0 14 0.00049 26.5 0.6 48 139-186 19-69 (98)
293 4e2q_A Ureidoglycine aminohydr 28.9 97 0.0033 26.8 5.9 49 138-187 187-236 (266)
294 3or8_A Transcription elongatio 28.9 86 0.003 25.8 5.3 38 120-162 7-45 (197)
295 3c3v_A Arachin ARAH3 isoform; 28.8 81 0.0028 30.1 5.8 56 132-187 367-428 (510)
296 2pml_X PFPK7, Ser/Thr protein 28.1 4.2 0.00014 36.3 -3.2 17 343-359 157-174 (348)
297 3s7i_A Allergen ARA H 1, clone 28.0 62 0.0021 30.1 4.8 49 139-187 46-97 (418)
298 2q67_A Potassium channel prote 28.0 3.2 0.00011 31.2 -3.4 35 3-37 69-106 (114)
299 3nw4_A Gentisate 1,2-dioxygena 27.8 2.1E+02 0.0073 25.9 8.2 75 142-225 284-358 (368)
300 3fme_A Dual specificity mitoge 27.5 6.9 0.00023 33.7 -1.8 17 343-359 115-132 (290)
301 2d40_A Z3393, putative gentisa 27.4 2.2E+02 0.0076 25.5 8.4 75 141-224 272-346 (354)
302 3qa8_A MGC80376 protein; kinas 26.6 9.7 0.00033 38.0 -1.1 61 299-359 60-143 (676)
303 2b9h_A MAP kinase FUS3, mitoge 26.3 7.5 0.00026 34.7 -1.9 17 343-359 118-134 (353)
304 3fz3_A Prunin; TREE NUT allerg 26.2 1.2E+02 0.0041 29.1 6.4 58 132-189 389-452 (531)
305 3kvw_A DYRK2, dual specificity 26.2 6.1 0.00021 36.9 -2.6 17 343-359 206-222 (429)
306 1wak_A Serine/threonine-protei 25.9 7.3 0.00025 35.3 -2.0 17 343-359 152-169 (397)
307 2y7j_A Phosphorylase B kinase 25.5 2.9 9.9E-05 38.1 -4.9 17 343-359 206-222 (365)
308 2pzi_A Probable serine/threoni 25.5 5.5 0.00019 39.7 -3.1 17 343-359 188-204 (681)
309 3cjx_A Protein of unknown func 25.4 69 0.0024 25.4 4.0 48 139-188 45-92 (165)
310 1rc6_A Hypothetical protein YL 25.1 1.3E+02 0.0046 25.4 6.2 47 139-186 181-228 (261)
311 3uim_A Brassinosteroid insensi 25.0 13 0.00044 32.7 -0.5 61 299-359 75-156 (326)
312 4ase_A Vascular endothelial gr 24.2 16 0.00053 33.3 -0.1 17 343-359 191-207 (353)
313 3myx_A Uncharacterized protein 24.0 73 0.0025 27.0 4.1 53 155-216 63-115 (238)
314 3o14_A Anti-ecfsigma factor, C 24.0 93 0.0032 26.0 4.8 64 140-216 46-109 (223)
315 1juh_A Quercetin 2,3-dioxygena 23.9 61 0.0021 29.2 3.9 69 147-223 262-333 (350)
316 1x82_A Glucose-6-phosphate iso 23.1 2.1E+02 0.0071 22.9 6.7 29 158-186 97-129 (190)
317 2e9q_A 11S globulin subunit be 22.4 1.6E+02 0.0053 27.7 6.4 58 132-189 317-380 (459)
318 2oyz_A UPF0345 protein VPA0057 22.2 2.2E+02 0.0074 20.3 5.6 61 142-212 28-89 (94)
319 3e7e_A HBUB1, BUB1A, mitotic c 21.5 16 0.00056 32.7 -0.5 17 343-359 178-194 (365)
320 3q60_A ROP5B; pseudokinase, tr 21.0 17 0.00058 32.8 -0.6 17 343-359 200-216 (371)
321 3nw4_A Gentisate 1,2-dioxygena 20.9 2.2E+02 0.0074 25.9 6.8 49 139-188 105-154 (368)
322 2phl_A Phaseolin; plant SEED s 20.7 90 0.0031 28.8 4.3 47 139-185 54-103 (397)
323 3gxj_A TGF-beta receptor type- 20.5 8.6 0.0003 33.3 -2.6 37 321-359 75-130 (303)
324 3hmm_A TGF-beta receptor type- 20.4 8.4 0.00029 34.1 -2.7 34 321-356 75-119 (303)
325 3g33_A Cell division protein k 20.3 21 0.00071 31.0 -0.1 17 343-359 126-142 (308)
No 1
>3ukn_A Novel protein similar to vertebrate potassium VOL channel, subfamily H (EAG-related)...; KCNH, ELK, ERG, CNBD, CNBHD, C-linker, ION channel; 2.20A {Danio rerio} PDB: 3ukt_B 3ukv_B
Probab=99.97 E-value=2.3e-31 Score=232.41 Aligned_cols=193 Identities=21% Similarity=0.399 Sum_probs=165.0
Q ss_pred HHHHhhhhhhcccchHHHHHHHHHHHHHHHH------HHhhHHHHHHHHHHHhCCCCCCCCCcCCCCcccHHHHHhhCCH
Q psy9025 30 ESGVDEDEEYHDSDSEKERRERFIQERIRHL------AHVFTERAQKIKRILDFPPTPSSSTTLSSSSEDENKILNNLPL 103 (361)
Q Consensus 30 ~s~~~~~~~~~~~~~~~~~~~~~~q~~~~~~------~~~~~~l~~~i~~y~~~~~~~~~~~~~~~~~~~e~~ll~~lp~ 103 (361)
|+++.++++.... +++++..+ +++|.+++.+|++||+|.|. .+++.+++++++.||+
T Consensus 1 g~ii~~~~~~~~~----------~~~~~~~i~~ym~~~~i~~~l~~rv~~y~~~~~~-------~~~~~~~~~il~~Lp~ 63 (212)
T 3ukn_A 1 GAMDQRMYSRRSL----------YHTRTKDLKDFIRVHRLPKALAQRMLECFQTTWS-------VNNGIDVSELLKDFPD 63 (212)
T ss_dssp -----------CH----------HHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCC-------TGGGCCCCCTTTTSCH
T ss_pred ChHHHHHHHHHHH----------HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHH-------hcCCCCHHHHHHHcCH
Confidence 4567777777777 44444444 34788999999999999998 6677888999999999
Q ss_pred hHHHHHHHHHHHHHhccCcccccCCHHHHHHHHHhcceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEEeCcEEEEEeCCC
Q psy9025 104 KLKTDVAINVHIQTLSKVQLFQDCDEALLRELVLKLRPVLYLPGDYICRKGEVGKEMYIVKTGQVQVVSGETVLATLTEG 183 (361)
Q Consensus 104 ~Lr~~i~~~~~~~~l~~~~~f~~l~~~~l~~l~~~l~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~~~~~~~~l~~G 183 (361)
.||.++..+++..++ ++|+|++++++++..++..++...|.||++|+++|++++.+|||.+|.|+++.++.++..+++|
T Consensus 64 ~L~~~i~~~~~~~l~-~~~~f~~l~~~~l~~l~~~~~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~~~~~~~~l~~G 142 (212)
T 3ukn_A 64 ELRADIAMHLNKELL-QLPLFESASRGCLRSLSLIIKTSFCAPGEFLIRQGDALQAIYFVCSGSMEVLKDNTVLAILGKG 142 (212)
T ss_dssp HHHHHHHTTCCCGGG-GSGGGTTCCHHHHHHHHHHCEEEEECTTCEEECTTSBCCEEEEEEECCEEEESSSCEEEEECTT
T ss_pred HHHHHHHHHHHHHHH-hcHHhhcCCHHHHHHHHHHhheEEeCCCCEEEECCCcccEEEEEEecEEEEEECCeEEEEecCC
Confidence 999999999887776 8999999999999999999999999999999999999999999999999999777889999999
Q ss_pred CeechhhhhcccCCC--ceeeEEEecceEEEEEEeHHHHHHHHHHCHHHHHHHHHHHHHHHH
Q psy9025 184 SVFGEISLLALAGTN--RRTADVRSHGFSNLFVLNKDDLNEAIEYYPNAQEVLKKKARQLIK 243 (361)
Q Consensus 184 d~fGe~~ll~~~~~~--~~~~~v~A~~~~~~~~l~~~~f~~ll~~~p~~~~~~~~~~~~~l~ 243 (361)
++||+.+++. +. ++.++++|.++|+++.|++++|..++..+|++...+.+.+.+++.
T Consensus 143 ~~fGe~~~~~---~~~~~~~~~v~a~~~~~l~~i~~~~f~~ll~~~p~~~~~~~~~l~~~l~ 201 (212)
T 3ukn_A 143 DLIGSDSLTK---EQVIKTNANVKALTYCDLQYISLKGLREVLRLYPEYAQKFVSEIQHDLT 201 (212)
T ss_dssp CEEECSCCSS---SSCCBBCSEEEESSCEEEEEEEHHHHHHHHHHCHHHHHHHHHHHHHHEE
T ss_pred CCcCcHHhcc---CCCCCcceEEEEcccEEEEEEeHHHHHHHHHHChHHHHHHHHHHHHhhc
Confidence 9999999998 66 999999999999999999999999999999999888877776643
No 2
>3bpz_A Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2; CNBD, C-linker, pacemaker, HCN, HCN2, CAP, PKA, CAMP, ION channel; HET: CMP; 1.65A {Mus musculus} PDB: 3ffq_A 1q3e_A* 1q43_A* 1q5o_A* 3u10_A* 2q0a_A* 3etq_A* 3u11_A* 3otf_A* 3u0z_A*
Probab=99.97 E-value=1.7e-30 Score=225.23 Aligned_cols=175 Identities=30% Similarity=0.497 Sum_probs=161.1
Q ss_pred HHhhHHHHHHHHHHHhCCCCCCCCCcCCCCcccHHHHHhhCCHhHHHHHHHHHHHHHhccCcccccCCHHHHHHHHHhcc
Q psy9025 61 AHVFTERAQKIKRILDFPPTPSSSTTLSSSSEDENKILNNLPLKLKTDVAINVHIQTLSKVQLFQDCDEALLRELVLKLR 140 (361)
Q Consensus 61 ~~~~~~l~~~i~~y~~~~~~~~~~~~~~~~~~~e~~ll~~lp~~Lr~~i~~~~~~~~l~~~~~f~~l~~~~l~~l~~~l~ 140 (361)
+++|.+++.+|++|++|.|. ++.++++++++.||+.||.++..+.+.++|+++|+|.+++++++..|+..++
T Consensus 25 ~~i~~~l~~rv~~y~~~~~~--------~~~~~e~~il~~l~~~L~~~i~~~~~~~~l~~~~~f~~l~~~~l~~l~~~~~ 96 (202)
T 3bpz_A 25 HKLPADFRQKIHDYYEHRYQ--------GKMFDEDSILGELNGPLREKIVNFNCRKLVASMPLFANADPNFVTAMLTKLK 96 (202)
T ss_dssp TTCCHHHHHHHHHHHHHHHT--------TCCCCHHHHHHHSCHHHHHHHHHHHTHHHHHTCHHHHTSCHHHHHHHHHHCE
T ss_pred cCCCHHHHHHHHHHHHHHHh--------ccCCCHHHHHHHcCHHHHHHHHHHHHHHHHhcCCchhcCCHHHHHHHHHhCC
Confidence 35788999999999999995 3578999999999999999999999999999999999999999999999999
Q ss_pred eEEeCCCCEEEeCCCCCCeEEEEEeeEEEEEeCcEEEEEeCCCCeechhhhhcccCCCceeeEEEecceEEEEEEeHHHH
Q psy9025 141 PVLYLPGDYICRKGEVGKEMYIVKTGQVQVVSGETVLATLTEGSVFGEISLLALAGTNRRTADVRSHGFSNLFVLNKDDL 220 (361)
Q Consensus 141 ~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~~~~~~~~l~~Gd~fGe~~ll~~~~~~~~~~~v~A~~~~~~~~l~~~~f 220 (361)
...|.||++|+++|++++.+|||.+|.|+++..+.....+++|++||+.+++. +.++.++++|.++|+++.|++++|
T Consensus 97 ~~~~~~ge~I~~~g~~~~~ly~I~~G~v~v~~~~g~~~~l~~G~~fGe~~~~~---~~~~~~~v~a~~~~~l~~i~~~~f 173 (202)
T 3bpz_A 97 FEVFQPGDYIIREGTIGKKMYFIQHGVVSVLTKGNKEMKLSDGSYFGEICLLT---RGRRTASVRADTYCRLYSLSVDNF 173 (202)
T ss_dssp EEEECTTCEEECTTSBCCEEEEEEECEEEEECTTSCCEEEETTCEECHHHHHH---CSBCSSEEEESSCEEEEEEEHHHH
T ss_pred ceEECCCCEEEECCCcCCeEEEEeccEEEEEECCCeEEEEcCCCEeccHHHhc---CCCcccEEEEeeEEEEEEEEHHHH
Confidence 99999999999999999999999999999984332334689999999999998 889999999999999999999999
Q ss_pred HHHHHHCHHHHHHHHHHHHHHHHHHH
Q psy9025 221 NEAIEYYPNAQEVLKKKARQLIKENA 246 (361)
Q Consensus 221 ~~ll~~~p~~~~~~~~~~~~~l~~~~ 246 (361)
..++..+|.+...+...+..+++...
T Consensus 174 ~~ll~~~p~~~~~~~~~~~~rl~~~~ 199 (202)
T 3bpz_A 174 NEVLEEYPMMRRAFETVAIDRLDRIG 199 (202)
T ss_dssp HHHHHHSGGGHHHHHHHHHHHHHHC-
T ss_pred HHHHHHCHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999998888887544
No 3
>2ptm_A Hyperpolarization-activated (IH) channel; ION channel, cyclic nucleotide binding domain, C-linker, CAM SPHCN1, HCN; HET: CMP; 1.93A {Strongylocentrotus purpuratus}
Probab=99.97 E-value=2.2e-30 Score=223.76 Aligned_cols=172 Identities=23% Similarity=0.461 Sum_probs=159.8
Q ss_pred HHhhHHHHHHHHHHHhCCCCCCCCCcCCCCcccHHHHHhhCCHhHHHHHHHHHHHHHhccCcccccCCHHHHHHHHHhcc
Q psy9025 61 AHVFTERAQKIKRILDFPPTPSSSTTLSSSSEDENKILNNLPLKLKTDVAINVHIQTLSKVQLFQDCDEALLRELVLKLR 140 (361)
Q Consensus 61 ~~~~~~l~~~i~~y~~~~~~~~~~~~~~~~~~~e~~ll~~lp~~Lr~~i~~~~~~~~l~~~~~f~~l~~~~l~~l~~~l~ 140 (361)
+++|.+++.+|++|++|.|. .+.++++++++.||+.||.++..+.+.++++++|+|.+++++++..++..++
T Consensus 24 ~~i~~~l~~rv~~y~~~~~~--------~~~~~e~~il~~l~~~Lr~~i~~~~~~~~l~~~~~f~~l~~~~l~~l~~~~~ 95 (198)
T 2ptm_A 24 RKLPSHLRNKILDYYEYRYR--------GKMFDERHIFREVSESIRQDVANYNCRDLVASVPFFVGADSNFVTRVVTLLE 95 (198)
T ss_dssp TTCCHHHHHHHHHHHHHHHT--------TCCCCSHHHHHHSCHHHHHHHHHHHTHHHHHHCGGGTTCCHHHHHHHHHHCE
T ss_pred cCCCHHHHHHHHHHHHHHHc--------ccCCCHHHHHHHcCHHHHHHHHHHHHHHHHhcCcchhcCCHHHHHHHHHhcc
Confidence 35889999999999999995 3568899999999999999999999999999999999999999999999999
Q ss_pred eEEeCCCCEEEeCCCCCCeEEEEEeeEEEEEe-CcEEEEEeCCCCeechhhhhcccCCCceeeEEEecceEEEEEEeHHH
Q psy9025 141 PVLYLPGDYICRKGEVGKEMYIVKTGQVQVVS-GETVLATLTEGSVFGEISLLALAGTNRRTADVRSHGFSNLFVLNKDD 219 (361)
Q Consensus 141 ~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~-~~~~~~~l~~Gd~fGe~~ll~~~~~~~~~~~v~A~~~~~~~~l~~~~ 219 (361)
...|.||++|+++|++++.+|||.+|.|+++. ++..+..+++|++||+.+++. +.++.++++|.++|+++.|++++
T Consensus 96 ~~~~~~ge~I~~~G~~~~~ly~I~~G~v~~~~~~g~~~~~l~~G~~fGe~~~~~---~~~~~~~~~a~~~~~l~~i~~~~ 172 (198)
T 2ptm_A 96 FEVFQPADYVIQEGTFGDRMFFIQQGIVDIIMSDGVIATSLSDGSYFGEICLLT---RERRVASVKCETYCTLFSLSVQH 172 (198)
T ss_dssp EEEECTTCEEECTTSCCSEEEEEEECCEEEECTTSCEEEEECTTCEESCHHHHH---SSCCSSEEEESSCEEEEEEEHHH
T ss_pred ceeeCCCCEEEECCCcCcEEEEEEeCEEEEEecCCeEEEEecCCCEechHHHcC---CCccceEEEEeeEEEEEEEeHHH
Confidence 99999999999999999999999999999983 334889999999999999998 88999999999999999999999
Q ss_pred HHHHHHHCHHHHHHHHHHHHHHHH
Q psy9025 220 LNEAIEYYPNAQEVLKKKARQLIK 243 (361)
Q Consensus 220 f~~ll~~~p~~~~~~~~~~~~~l~ 243 (361)
|..++.++|++...+...+.+|++
T Consensus 173 f~~ll~~~p~~~~~~~~~~~~rl~ 196 (198)
T 2ptm_A 173 FNQVLDEFPAMRKTMEEIAVRRLT 196 (198)
T ss_dssp HHHHHHHCHHHHHHHHHHHHTCC-
T ss_pred HHHHHHHChHHHHHHHHHHHHHHh
Confidence 999999999999888877776654
No 4
>4f8a_A Potassium voltage-gated channel subfamily H membe; probable regulatory domain of potassium channel, membrane PR transport protein; 2.20A {Mus musculus}
Probab=99.91 E-value=2e-23 Score=173.25 Aligned_cols=140 Identities=24% Similarity=0.519 Sum_probs=125.7
Q ss_pred HHHHhhCCHhHHHHHHHHHHHHHhccCcccccCCHHHHHHHHHhcceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEEeCc
Q psy9025 95 NKILNNLPLKLKTDVAINVHIQTLSKVQLFQDCDEALLRELVLKLRPVLYLPGDYICRKGEVGKEMYIVKTGQVQVVSGE 174 (361)
Q Consensus 95 ~~ll~~lp~~Lr~~i~~~~~~~~l~~~~~f~~l~~~~l~~l~~~l~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~~~ 174 (361)
+++++.+|+.+|.++..+++.++|+++|+|.+++++.+..++..++...|++|++|+++|++++.+|||.+|.|+++.++
T Consensus 6 ~~il~~lp~~l~~~i~~~~~~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~ 85 (160)
T 4f8a_A 6 EKVLQICPKDMRADICVHLNRKVFKEHPAFRLASDGCLRALAMEFQTVHCAPGDLIYHAGESVDSLCFVVSGSLEVIQDD 85 (160)
T ss_dssp ---------CCHHHHHHHHTHHHHTTCGGGTTCCHHHHHHHHTTCEEEEECTTCEEECTTSBCCEEEEEEESEEEEEETT
T ss_pred HHHHHHCCHHHHHHHHHHHHHHHHHhCHhhhhCCHHHHHHHHHhceeeeeCCCCEEEeCCCCccEEEEEEeeEEEEEECC
Confidence 45899999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred EEEEEeCCCCeechhhhhcccCC--CceeeEEEecceEEEEEEeHHHHHHHHHHCHHHHHHHHHH
Q psy9025 175 TVLATLTEGSVFGEISLLALAGT--NRRTADVRSHGFSNLFVLNKDDLNEAIEYYPNAQEVLKKK 237 (361)
Q Consensus 175 ~~~~~l~~Gd~fGe~~ll~~~~~--~~~~~~v~A~~~~~~~~l~~~~f~~ll~~~p~~~~~~~~~ 237 (361)
..+..+++|++||+.+++. + .++.++++|.++|+++.|++++|.+++.++|.+...+.+.
T Consensus 86 ~~~~~~~~G~~fG~~~~~~---~~~~~~~~~~~a~~~~~v~~i~~~~~~~l~~~~p~~~~~~~~~ 147 (160)
T 4f8a_A 86 EVVAILGKGDVFGDVFWKE---ATLAQSCANVRALTYCDLHVIKRDALQKVLEFYTAFSHSFSRN 147 (160)
T ss_dssp EEEEEEETTCEEECCTTTC---SSCCBCSSEEEESSCEEEEEEEHHHHHHHHHHCHHHHHHHHHH
T ss_pred EEEEEecCCCEeCcHHHhc---CcccceEEEEEECCceEEEEEcHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999997 5 6999999999999999999999999999999998776543
No 5
>3ocp_A PRKG1 protein; serine/threonine kinase, TF2I and IRAG, transferase; HET: CMP; 2.49A {Homo sapiens} PDB: 3od0_A* 3ogj_A*
Probab=99.87 E-value=1e-21 Score=159.24 Aligned_cols=131 Identities=22% Similarity=0.381 Sum_probs=119.6
Q ss_pred hCCHhHHHHHHHHHHHHHhccCcccccCCHHHHHHHHHhcceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEEeCcEEEEE
Q psy9025 100 NLPLKLKTDVAINVHIQTLSKVQLFQDCDEALLRELVLKLRPVLYLPGDYICRKGEVGKEMYIVKTGQVQVVSGETVLAT 179 (361)
Q Consensus 100 ~lp~~Lr~~i~~~~~~~~l~~~~~f~~l~~~~l~~l~~~l~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~~~~~~~~ 179 (361)
.+|..+|.+........+|+++++|..++++.+..++..++.+.|.+|++|+++|+.++.+|||.+|.|++..++..+..
T Consensus 7 ~~p~~~k~~~~~~~~~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~g~~~~~ 86 (139)
T 3ocp_A 7 TLPFYPKSPQSKDLIKEAILDNDFMKNLELSQIQEIVDCMYPVEYGKDSCIIKEGDVGSLVYVMEDGKVEVTKEGVKLCT 86 (139)
T ss_dssp CCCCCCCCHHHHHHHHHHHHHCTTTTTSCHHHHHHHHHHCEEEEECSSCEEECTTSCCCEEEEEEECCEEEEETTEEEEE
T ss_pred cCCCCCCCHHHHHHHHHHHhcCHhhhcCCHHHHHHHHHhcEEEecCCCCEEEeCCCcCCEEEEEEeCEEEEEECCEEEEE
Confidence 57888888888899999999999999999999999999999999999999999999999999999999999987789999
Q ss_pred eCCCCeechhhhhcccCCCceeeEEEecceEEEEEEeHHHHHHHHHHCHHHHHH
Q psy9025 180 LTEGSVFGEISLLALAGTNRRTADVRSHGFSNLFVLNKDDLNEAIEYYPNAQEV 233 (361)
Q Consensus 180 l~~Gd~fGe~~ll~~~~~~~~~~~v~A~~~~~~~~l~~~~f~~ll~~~p~~~~~ 233 (361)
+++|++||+.+++. +.++.++++|.++|+++.|++++|.+++.++|.+.+.
T Consensus 87 ~~~G~~fGe~~~l~---~~~~~~~~~a~~~~~v~~i~~~~~~~l~~~~p~~~r~ 137 (139)
T 3ocp_A 87 MGPGKVFGELAILY---NCTRTATVKTLVNVKLWAIDRQCFQTIMMRTGLIKHT 137 (139)
T ss_dssp ECTTCEESCHHHHH---CCCCSSEEEESSCEEEEEEEHHHHHHHHTC-------
T ss_pred eCCCCEeccHHHHC---CCCcceEEEECcceEEEEEcHHHHHHHHhhChHhhhh
Confidence 99999999999998 8999999999999999999999999999999998643
No 6
>3gyd_A CNMP-BD protein, cyclic nucleotide-binding domain; nucleotide binding protein, structural genomics; HET: MSE CMP; 1.79A {Methylobacillus flagellatus KT}
Probab=99.86 E-value=6.7e-21 Score=162.73 Aligned_cols=152 Identities=20% Similarity=0.310 Sum_probs=131.8
Q ss_pred HHHHHhhCCHhH----HHHHHHHHHHHHhccCcccccCCHHHHHHHHHhcceEEeCCCCEEEeCCCCCCeEEEEEeeEEE
Q psy9025 94 ENKILNNLPLKL----KTDVAINVHIQTLSKVQLFQDCDEALLRELVLKLRPVLYLPGDYICRKGEVGKEMYIVKTGQVQ 169 (361)
Q Consensus 94 e~~ll~~lp~~L----r~~i~~~~~~~~l~~~~~f~~l~~~~l~~l~~~l~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~ 169 (361)
+..+.+.+++.+ +.+........+|+++|+|..++++.+..++..++.+.|++|++|+++|++++.+|||.+|.|+
T Consensus 13 ~~~~~~~~~~dli~~~~~~~~~~~~~~~L~~~~~f~~l~~~~l~~l~~~~~~~~~~~ge~i~~~G~~~~~ly~I~~G~v~ 92 (187)
T 3gyd_A 13 ENLYFQGMYPDLVHLGGADKYFEEILEIVNKIKLFGDFSNEEVRYLCSYMQCYAAPRDCQLLTEGDPGDYLLLILTGEVN 92 (187)
T ss_dssp HHHHTSTTGGGCEEEEEGGGGHHHHHHHHTTCCSSCCCCHHHHHHHHTTCEEEEECTTCEEECTTSCCCEEEEEEEEEEE
T ss_pred cceeecCCchHHhccCccHHHHHHHHHHHhcCHhhhcCCHHHHHHHHHhcEEEEeCCCCEEEcCCCCCCeEEEEEeCEEE
Confidence 445556666665 4555566778999999999999999999999999999999999999999999999999999999
Q ss_pred EE-----eCcEEEEEeCCCCeechhhhhcccCCCceeeEEEecceEEEEEEeHHHHHHHHHHCHHHHHHHH----HHHHH
Q psy9025 170 VV-----SGETVLATLTEGSVFGEISLLALAGTNRRTADVRSHGFSNLFVLNKDDLNEAIEYYPNAQEVLK----KKARQ 240 (361)
Q Consensus 170 v~-----~~~~~~~~l~~Gd~fGe~~ll~~~~~~~~~~~v~A~~~~~~~~l~~~~f~~ll~~~p~~~~~~~----~~~~~ 240 (361)
++ |++.++..+++|++||+.+++. +.++.++++|.++|+++.|++++|..++.++|.+...+. +.+.+
T Consensus 93 v~~~~~~g~~~~~~~~~~G~~fGe~~~l~---~~~~~~~v~A~~~~~v~~i~~~~~~~l~~~~p~~~~~l~~~l~~~l~~ 169 (187)
T 3gyd_A 93 VIKDIPNKGIQTIAKVGAGAIIGEMSMID---GMPRSASCVASLPTDFAVLSRDALYQLLANMPKLGNKVLIRLLQLLTA 169 (187)
T ss_dssp EEEEETTTEEEEEEEEETTCEESHHHHHH---CCCCSSEEEEEEEEEEEEEEHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred EEEECCCCCeEEEEEccCCCeeeeHHHhC---CCCeeEEEEECCCeEEEEEcHHHHHHHHHHChHHHHHHHHHHHHHHHH
Confidence 98 2347899999999999999998 889999999999999999999999999999999987766 55566
Q ss_pred HHHHHHhh
Q psy9025 241 LIKENAAR 248 (361)
Q Consensus 241 ~l~~~~~~ 248 (361)
+++....+
T Consensus 170 rl~~~~~~ 177 (187)
T 3gyd_A 170 RFRESYDR 177 (187)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66555433
No 7
>3mdp_A Cyclic nucleotide-binding domain (CNMP-BD) protei; structural genomics, joint center for structural genomics; HET: MSE; 1.90A {Geobacter metallireducens}
Probab=99.86 E-value=9.9e-21 Score=153.53 Aligned_cols=126 Identities=17% Similarity=0.301 Sum_probs=113.8
Q ss_pred HHHhccCcccccCCHHHHHHHHHhcceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEE-----eCcEE---EEEeCCCCee
Q psy9025 115 IQTLSKVQLFQDCDEALLRELVLKLRPVLYLPGDYICRKGEVGKEMYIVKTGQVQVV-----SGETV---LATLTEGSVF 186 (361)
Q Consensus 115 ~~~l~~~~~f~~l~~~~l~~l~~~l~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~-----~~~~~---~~~l~~Gd~f 186 (361)
.++|+++|+|++++++.+..++..++.+.|++|++|+++|++++.+|||.+|.|+++ +++.. +..+++|++|
T Consensus 5 ~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~~~~G~~f 84 (142)
T 3mdp_A 5 PERLRVYRFFASLTDEQLKDIALISEEKSFPTGSVIFKENSKADNLMLLLEGGVELFYSNGGAGSAANSTVCSVVPGAIF 84 (142)
T ss_dssp TTGGGGSHHHHTSCHHHHHHHHHTEEEEEECTTCEEECTTSBCCEEEEEEESCEEEECC---------CEEEEECTTCEE
T ss_pred HHHHhhCchhccCCHHHHHHHHHhhcEEecCCCCEEEeCCCCCCcEEEEEeCEEEEEEECCCCCceEeeeEEEecCCCEe
Confidence 357899999999999999999999999999999999999999999999999999998 34566 8999999999
Q ss_pred chhhhhcccCCCceeeEEEecceEEEEEEeHHHHHHHHHHCHHHHHHHHHHHHHHHH
Q psy9025 187 GEISLLALAGTNRRTADVRSHGFSNLFVLNKDDLNEAIEYYPNAQEVLKKKARQLIK 243 (361)
Q Consensus 187 Ge~~ll~~~~~~~~~~~v~A~~~~~~~~l~~~~f~~ll~~~p~~~~~~~~~~~~~l~ 243 (361)
|+.+++. +.++.++++|.++|+++.|++++|..++.++|.+...+.+.+.+++.
T Consensus 85 G~~~~~~---~~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~p~~~~~l~~~l~~~l~ 138 (142)
T 3mdp_A 85 GVSSLIK---PYHYTSSARATKPVRVVDINGARLREMSENNQALGQVLMNNVAAAVL 138 (142)
T ss_dssp CGGGSST---TCBCSSEEEESSCEEEEEEEHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred chHHHcC---CCCceEEEEECCcEEEEEEeHHHHHHHHHHChHHHHHHHHHHHHHHH
Confidence 9999998 89999999999999999999999999999999999877777766654
No 8
>2pqq_A Putative transcriptional regulator; APC7345, streptomyces coelicolor structural genomics, PSI-2, protein structure initiative; 2.00A {Streptomyces coelicolor A3}
Probab=99.85 E-value=2e-20 Score=152.86 Aligned_cols=131 Identities=24% Similarity=0.379 Sum_probs=122.2
Q ss_pred HHHhccCcccccCCHHHHHHHHHhcceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEE-----eCcEEEEEeCCCCeechh
Q psy9025 115 IQTLSKVQLFQDCDEALLRELVLKLRPVLYLPGDYICRKGEVGKEMYIVKTGQVQVV-----SGETVLATLTEGSVFGEI 189 (361)
Q Consensus 115 ~~~l~~~~~f~~l~~~~l~~l~~~l~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~-----~~~~~~~~l~~Gd~fGe~ 189 (361)
.++++++|+|..++++.+..++..++.+.|++|++|+++|++++.+|||.+|.|+++ |++..+..+++|++||+.
T Consensus 4 ~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G~~ 83 (149)
T 2pqq_A 4 DDVLRRNPLFAALDDEQSAELRASMSEVTLARGDTLFHEGDPGDRLYVVTEGKVKLHRTSPDGRENMLAVVGPSELIGEL 83 (149)
T ss_dssp GGGGTSSTTTTTCCHHHHHHHHHHCEEEEECTTCEEECTTSEECEEEEEEESCEEEEEECTTSSEEEEEEECTTCEESGG
T ss_pred HHHhhhChhhhcCCHHHHHHHHHhceEEEeCCCCEEECCCCCCCeEEEEEecEEEEEEECCCCcEEEEEEcCCcCEechH
Confidence 357899999999999999999999999999999999999999999999999999998 455789999999999999
Q ss_pred hhhcccCCCceeeEEEecceEEEEEEeHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHhh
Q psy9025 190 SLLALAGTNRRTADVRSHGFSNLFVLNKDDLNEAIEYYPNAQEVLKKKARQLIKENAAR 248 (361)
Q Consensus 190 ~ll~~~~~~~~~~~v~A~~~~~~~~l~~~~f~~ll~~~p~~~~~~~~~~~~~l~~~~~~ 248 (361)
+++. +.++.++++|.++|+++.|++++|..++.++|.+...+...+.+++.....+
T Consensus 84 ~~~~---~~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~p~~~~~~~~~~~~~l~~~~~~ 139 (149)
T 2pqq_A 84 SLFD---PGPRTATGTALTEVKLLALGHGDLQPWLNVRPEVATALLRAVARRLRKTNDA 139 (149)
T ss_dssp GGTS---CEECSSEEEESSCEEEEEEEGGGHHHHHHHCTHHHHHHHHHHHHHHHHHHTT
T ss_pred HhcC---CCCcceEEEEccceEEEEEeHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHH
Confidence 9998 7899999999999999999999999999999999999998888888776644
No 9
>1vp6_A CNBD, cyclic-nucleotide binding domain of mesorhizobium LOTI CNG potassium channel; dimer helical bundle beta barrel core with cyclic AMP bound; HET: CMP; 1.70A {Mesorhizobium loti} SCOP: b.82.3.2 PDB: 3cl1_A* 2k0g_A* 2kxl_A 3clp_A* 1u12_A 3co2_A
Probab=99.85 E-value=2.5e-20 Score=150.62 Aligned_cols=128 Identities=30% Similarity=0.445 Sum_probs=117.2
Q ss_pred HHHHHhccCcccccCCHHHHHHHHHhcceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEEeCcEEEEEeCCCCeechhhhh
Q psy9025 113 VHIQTLSKVQLFQDCDEALLRELVLKLRPVLYLPGDYICRKGEVGKEMYIVKTGQVQVVSGETVLATLTEGSVFGEISLL 192 (361)
Q Consensus 113 ~~~~~l~~~~~f~~l~~~~l~~l~~~l~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~~~~~~~~l~~Gd~fGe~~ll 192 (361)
...++|+++|+|..++++.+..++..++.+.|++|++|+++|++++.+|||.+|.|+++... ...+++|++||+.+++
T Consensus 8 ~~~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~--~~~~~~G~~~G~~~~~ 85 (138)
T 1vp6_A 8 RNWQLVAAVPLFQKLGPAVLVEIVRALRARTVPAGAVICRIGEPGDRMFFVVEGSVSVATPN--PVELGPGAFFGEMALI 85 (138)
T ss_dssp HHHHHHTTCGGGGGCCHHHHHHHHHHCEEEEECTTCEEECTTSCCCEEEEEEESCEEECSSS--CEEECTTCEECHHHHH
T ss_pred HHHHHHHhChhhhcCCHHHHHHHHHhhcEEEeCCCCEEEeCCCCcceEEEEEeeEEEEEeCC--cceECCCCEeeehHhc
Confidence 35678999999999999999999999999999999999999999999999999999998544 3589999999999999
Q ss_pred cccCCCceeeEEEecceEEEEEEeHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
Q psy9025 193 ALAGTNRRTADVRSHGFSNLFVLNKDDLNEAIEYYPNAQEVLKKKARQLIKEN 245 (361)
Q Consensus 193 ~~~~~~~~~~~v~A~~~~~~~~l~~~~f~~ll~~~p~~~~~~~~~~~~~l~~~ 245 (361)
. +.++.++++|.++|+++.|++++|..++.++|.+...+.+.+.+|++..
T Consensus 86 ~---~~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~p~~~~~~~~~~~~r~~~~ 135 (138)
T 1vp6_A 86 S---GEPRSATVSAATTVSLLSLHSADFQMLCSSSPEIAEIFRKTALERRGAA 135 (138)
T ss_dssp H---CCCCSSCEEESSSEEEEEEEHHHHHHHHHHCHHHHHHHHHHHHHHCC--
T ss_pred c---CCCceeEEEECCCEEEEEECHHHHHHHHHHCHHHHHHHHHHHHHhhccc
Confidence 8 7899999999999999999999999999999999999888888776543
No 10
>2z69_A DNR protein; beta barrel, dimerization helix, transcription regulator; 2.10A {Pseudomonas aeruginosa}
Probab=99.84 E-value=7.9e-20 Score=150.29 Aligned_cols=128 Identities=22% Similarity=0.289 Sum_probs=116.4
Q ss_pred HHHHhccCcccccCCHHHHHHHHHhcceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEE-----eCcEEEEEeCCCCeech
Q psy9025 114 HIQTLSKVQLFQDCDEALLRELVLKLRPVLYLPGDYICRKGEVGKEMYIVKTGQVQVV-----SGETVLATLTEGSVFGE 188 (361)
Q Consensus 114 ~~~~l~~~~~f~~l~~~~l~~l~~~l~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~-----~~~~~~~~l~~Gd~fGe 188 (361)
..++++++++|..++++.+..++..++.+.|++|++|+++|++++.+|||.+|.|+++ |++.++..+++|++||+
T Consensus 10 ~~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~G~ 89 (154)
T 2z69_A 10 HQQLLQSHHLFEPLSPVQLQELLASSDLVNLDKGAYVFRQGEPAHAFYYLISGCVKIYRLTPEGQEKILEVTNERNTFAE 89 (154)
T ss_dssp HHHHHTTSTTTTTSCHHHHHHHHHTCEEEEECTTCEEECTTSBCCEEEEEEESCEEEECCCC-----CCEEECTTEEESG
T ss_pred HHHHhhcChhhcCCCHHHHHHHHhhCcEEEecCCCEEecCCCccceEEEEEeCEEEEEEECCCCCEEEEEEccCCCeecc
Confidence 3578999999999999999999999999999999999999999999999999999998 45577899999999999
Q ss_pred hhhhcccCCCc-eeeEEEecceEEEEEEeHHHHHHHHHHCHHHHHHHHHHHHHHHHH
Q psy9025 189 ISLLALAGTNR-RTADVRSHGFSNLFVLNKDDLNEAIEYYPNAQEVLKKKARQLIKE 244 (361)
Q Consensus 189 ~~ll~~~~~~~-~~~~v~A~~~~~~~~l~~~~f~~ll~~~p~~~~~~~~~~~~~l~~ 244 (361)
.+++. +.+ +.++++|.++|+++.|++++|..++.++|.+...+.+.+..+++.
T Consensus 90 ~~~~~---~~~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~p~~~~~l~~~~~~rl~~ 143 (154)
T 2z69_A 90 AMMFM---DTPNYVATAQAVVPSQLFRFSNKAYLRQLQDNTPLALALLAKLSTRLHQ 143 (154)
T ss_dssp GGGGS---SCSBCSSEEEESSSEEEEEEEHHHHHHHHTTCHHHHHHHHHHHHHHHTC
T ss_pred Hhhcc---CCCCCceEEEEccceEEEEECHHHHHHHHHHChHHHHHHHHHHHHHHHH
Confidence 99998 677 999999999999999999999999999999998888877776653
No 11
>4ev0_A Transcription regulator, CRP family; CAMP binding, winged helix-turn-helix motif, DNA binding, transcription activator; HET: CMP; 2.40A {Thermus thermophilus}
Probab=99.82 E-value=2.7e-19 Score=155.75 Aligned_cols=127 Identities=25% Similarity=0.391 Sum_probs=115.9
Q ss_pred hccCcccccCCHHHHHHHHHhcceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEE-----eCcEEEEEeCCCCeechhhhh
Q psy9025 118 LSKVQLFQDCDEALLRELVLKLRPVLYLPGDYICRKGEVGKEMYIVKTGQVQVV-----SGETVLATLTEGSVFGEISLL 192 (361)
Q Consensus 118 l~~~~~f~~l~~~~l~~l~~~l~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~-----~~~~~~~~l~~Gd~fGe~~ll 192 (361)
|+++|+|.+++++++..++..++...|++|++|+++|++++.+|||.+|.|+++ |++.++..+++|++||+.+++
T Consensus 1 L~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G~~~~~ 80 (216)
T 4ev0_A 1 MKGSPLFHGLAPEEVDLALSYFQRRLYPQGKPIFYQGDLGQALYLVASGKVRLFRTHLGGQERTLALLGPGELFGEMSLL 80 (216)
T ss_dssp ---CGGGTTCCHHHHHHHHTTCEEEEECTTCEEECTTCBCCEEEEEEESCEEEEEECSSSCEEEEEEECTTCEECHHHHH
T ss_pred CCCChhhcCCCHHHHHHHHHhheEEEeCCCCEEEeCCCCCCEEEEEEeCEEEEEEECCCCCEEEEEEecCCCEEeehhhc
Confidence 568999999999999999999999999999999999999999999999999998 455789999999999999999
Q ss_pred cccCCCceeeEEEecceEEEEEEeHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHh
Q psy9025 193 ALAGTNRRTADVRSHGFSNLFVLNKDDLNEAIEYYPNAQEVLKKKARQLIKENAA 247 (361)
Q Consensus 193 ~~~~~~~~~~~v~A~~~~~~~~l~~~~f~~ll~~~p~~~~~~~~~~~~~l~~~~~ 247 (361)
. +.++.++++|.++|+++.|++++|..++.++|.+...+...+..++.....
T Consensus 81 ~---~~~~~~~~~a~~~~~v~~i~~~~~~~l~~~~p~~~~~~~~~l~~~~~~~~~ 132 (216)
T 4ev0_A 81 D---EGERSASAVAVEDTELLALFREDYLALIRRLPLVAHNLAALLARRLREADL 132 (216)
T ss_dssp H---CCBCSSEEEESSSEEEEEEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
T ss_pred C---CCCcceEEEEcCCEEEEEEcHHHHHHHHHHCcHHHHHHHHHHHHHHHHHHH
Confidence 8 889999999999999999999999999999999998888888877765543
No 12
>3dn7_A Cyclic nucleotide binding regulatory protein; structural genomics, APC88869, cyclic nucleotide binding REG protein, PSI-2; 1.80A {Cytophaga hutchinsonii}
Probab=99.82 E-value=1.3e-19 Score=155.31 Aligned_cols=132 Identities=11% Similarity=0.116 Sum_probs=120.7
Q ss_pred HHHHhccCcccccCCHHHHHHHHHhcceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEE-----eCcEEEEEeCCCCeech
Q psy9025 114 HIQTLSKVQLFQDCDEALLRELVLKLRPVLYLPGDYICRKGEVGKEMYIVKTGQVQVV-----SGETVLATLTEGSVFGE 188 (361)
Q Consensus 114 ~~~~l~~~~~f~~l~~~~l~~l~~~l~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~-----~~~~~~~~l~~Gd~fGe 188 (361)
...+++.+++|.+|+++++..+...++.+.|++|++|+++|++++.+|||.+|.|+++ |++.++..+++|++||+
T Consensus 5 ~~~l~~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~l~~~G~~~~~~y~i~~G~v~~~~~~~~G~e~~~~~~~~g~~~ge 84 (194)
T 3dn7_A 5 HTALINHIRKFIFLTDEDAGTLSAFFQLKKVRKKETLLKTGEICRINYFVVKGCLRLFFIDEKGIEQTTQFAIENWWLSD 84 (194)
T ss_dssp CHHHHHHHHTTSCCCHHHHHHHHTTCEEEEECTTCEEECTTSBCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEECC
T ss_pred HHHHHHHHHHhCCCCHHHHHHHHHhCEEEEEcCCCEEECCCCeeeEEEEeecCeEEEEEECCCCCEEEEEEccCCcEEee
Confidence 3567788999999999999999999999999999999999999999999999999998 45688999999999998
Q ss_pred h-hhhcccCCCceeeEEEecceEEEEEEeHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHhh
Q psy9025 189 I-SLLALAGTNRRTADVRSHGFSNLFVLNKDDLNEAIEYYPNAQEVLKKKARQLIKENAAR 248 (361)
Q Consensus 189 ~-~ll~~~~~~~~~~~v~A~~~~~~~~l~~~~f~~ll~~~p~~~~~~~~~~~~~l~~~~~~ 248 (361)
. +++. +.++.++++|.++|+++.|++++|.+++.++|.+...+...+.+++.....+
T Consensus 85 ~~~~~~---~~~~~~~~~a~~~~~v~~i~~~~~~~l~~~~p~~~~~~~~~~~~~l~~~~~~ 142 (194)
T 3dn7_A 85 YMAFQK---QQPADFYIQSVENCELLSITYTEQENLFERIPALERYFRLVYQKSFAAAQLR 142 (194)
T ss_dssp HHHHHH---TCBCSSEEEESSCEEEEEEEHHHHHHHHHHCTTHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHhc---CCCCceEEEEECCEEEEEEeHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH
Confidence 7 6677 7899999999999999999999999999999999998888888887665544
No 13
>3pna_A CAMP-dependent protein kinase type I-alpha regula subunit; beta-barrel, CAMP-binding, catalytic subunit, transferase; HET: CMP; 1.50A {Bos taurus} PDB: 3fhi_B* 3iia_A 3plq_A* 1u7e_B* 3pvb_B*
Probab=99.82 E-value=1.2e-19 Score=149.80 Aligned_cols=120 Identities=19% Similarity=0.401 Sum_probs=112.1
Q ss_pred HHHHHHHhccCcccccCCHHHHHHHHHhcceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEEeCcEEEEEeCCCCeechhh
Q psy9025 111 INVHIQTLSKVQLFQDCDEALLRELVLKLRPVLYLPGDYICRKGEVGKEMYIVKTGQVQVVSGETVLATLTEGSVFGEIS 190 (361)
Q Consensus 111 ~~~~~~~l~~~~~f~~l~~~~l~~l~~~l~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~~~~~~~~l~~Gd~fGe~~ 190 (361)
......+|+++++|..|+++.+..++..++...|.+|++|+++|++++.+|||.+|.|+++.++..+..+++|++||+.+
T Consensus 33 ~~~~~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~~~~~~~G~~fGe~~ 112 (154)
T 3pna_A 33 MAALAKAIEKNVLFSHLDDNERSDIFDAMFPVSFIAGETVIQQGDEGDNFYVIDQGEMDVYVNNEWATSVGEGGSFGELA 112 (154)
T ss_dssp HHHHHHHHHHCGGGTTCCHHHHHHHHHHCEEEEECTTCEEECTTSCCCEEEEEEESCEEEEETTEEEEEECTTCEECCHH
T ss_pred HHHHHHHHHhChhhhhCCHHHHHHHHHhceEEEECCCCEEEeCCCCCCeEEEEEecEEEEEECCEEEEEecCCCEeeehH
Confidence 44567899999999999999999999999999999999999999999999999999999998888899999999999999
Q ss_pred hhcccCCCceeeEEEecceEEEEEEeHHHHHHHHHHCHHHHHH
Q psy9025 191 LLALAGTNRRTADVRSHGFSNLFVLNKDDLNEAIEYYPNAQEV 233 (361)
Q Consensus 191 ll~~~~~~~~~~~v~A~~~~~~~~l~~~~f~~ll~~~p~~~~~ 233 (361)
++. +.++.++++|.++|+++.|++++|..++.++|.+...
T Consensus 113 ~~~---~~~~~~~v~A~~~~~~~~i~~~~~~~ll~~~~~~~~~ 152 (154)
T 3pna_A 113 LIY---GTPRAATVKAKTNVKLWGIDRDSYRRILMGSTLRKRK 152 (154)
T ss_dssp HHH---CCCCSSEEEESSCEEEEEEEHHHHHHHTHHHHHHC--
T ss_pred hhc---CCCcceEEEECcceEEEEEeHHHHHHHHHhChHHHhh
Confidence 998 8899999999999999999999999999999987543
No 14
>3idb_B CAMP-dependent protein kinase type II-beta regulatory subunit, CAMP-dependent protein kinase catalytic subunit alpha; PKA, SPR, affinity; HET: TPO SEP ANP; 1.62A {Rattus norvegicus} PDB: 3idc_B*
Probab=99.82 E-value=1e-19 Score=151.20 Aligned_cols=124 Identities=18% Similarity=0.314 Sum_probs=114.5
Q ss_pred HHHHHHHHHHHHhccCcccccCCHHHHHHHHHhcceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEE----eCcEEEEEeC
Q psy9025 106 KTDVAINVHIQTLSKVQLFQDCDEALLRELVLKLRPVLYLPGDYICRKGEVGKEMYIVKTGQVQVV----SGETVLATLT 181 (361)
Q Consensus 106 r~~i~~~~~~~~l~~~~~f~~l~~~~l~~l~~~l~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~----~~~~~~~~l~ 181 (361)
+.+.......++|+++++|..|+++.+..++..++...|.+|++|+++|++++.+|||.+|.|+++ |++..+..++
T Consensus 28 ~~~~~~~~~~~~l~~~~~f~~l~~~~l~~l~~~~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~g~~~~~~~~~ 107 (161)
T 3idb_B 28 KTDDQRNRLQEACKDILLFKNLDPEQMSQVLDAMFEKLVKEGEHVIDQGDDGDNFYVIDRGTFDIYVKCDGVGRCVGNYD 107 (161)
T ss_dssp CCHHHHHHHHHHHTTCHHHHTSCHHHHHHHHHHCEEEEECTTCEEECTTSCCCEEEEEEESEEEEEEEETTEEEEEEEEE
T ss_pred CCHHHHHHHHHHHhCCHhhhcCCHHHHHHHHHhcceeEeCCCCEEEeCCCCCcEEEEEEeCEEEEEEcCCCCeEEEEEcC
Confidence 444556667899999999999999999999999999999999999999999999999999999998 3357889999
Q ss_pred CCCeechhhhhcccCCCceeeEEEecceEEEEEEeHHHHHHHHHHCHHHHH
Q psy9025 182 EGSVFGEISLLALAGTNRRTADVRSHGFSNLFVLNKDDLNEAIEYYPNAQE 232 (361)
Q Consensus 182 ~Gd~fGe~~ll~~~~~~~~~~~v~A~~~~~~~~l~~~~f~~ll~~~p~~~~ 232 (361)
+|++||+.+++. +.++.++++|.++|+++.|++++|..++.++|.+..
T Consensus 108 ~G~~fGe~~~~~---~~~~~~~v~A~~~~~~~~i~~~~~~~l~~~~p~~~~ 155 (161)
T 3idb_B 108 NRGSFGELALMY---NTPRAATITATSPGALWGLDRVTFRRIIVKNNAKKR 155 (161)
T ss_dssp SCCEECGGGGTC---CCCCSSEEEESSSEEEEEEEHHHHHHHHHHHHHTSC
T ss_pred CCCEechHHHHc---CCCcccEEEECCCeEEEEEeHHHHHHHHHHCHHHHH
Confidence 999999999998 889999999999999999999999999999998754
No 15
>3fx3_A Cyclic nucleotide-binding protein; helix_TURN_helix, CAMP regulatory protein, structural genomi 2, protein structure initiative; 2.20A {Ruegeria pomeroyi} PDB: 3h3z_A*
Probab=99.82 E-value=2.8e-19 Score=157.99 Aligned_cols=134 Identities=14% Similarity=0.149 Sum_probs=123.9
Q ss_pred HHHHHHhccCcccccCCHHHHHHHHHhcceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEE-----eCcEEEEEeCCCCee
Q psy9025 112 NVHIQTLSKVQLFQDCDEALLRELVLKLRPVLYLPGDYICRKGEVGKEMYIVKTGQVQVV-----SGETVLATLTEGSVF 186 (361)
Q Consensus 112 ~~~~~~l~~~~~f~~l~~~~l~~l~~~l~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~-----~~~~~~~~l~~Gd~f 186 (361)
....++|+++|+|..++++.+..++..++.+.|++|++|+++|++++.+|||.+|.|+++ |++.++..+++|++|
T Consensus 7 ~~~~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~ 86 (237)
T 3fx3_A 7 EAQKAIARNSLLIRSLPEQHVDALLSQAVWRSYDRGETLFLQEEKAQAIHVVIDGWVKLFRMTPTGSEAVVSVFTRGESF 86 (237)
T ss_dssp HHHHHHHTTSHHHHTSCHHHHHHHHTTCEEEEECTTCEEECTTSCCCEEEEEEESEEEEEEECTTSCEEEEEEEETTEEE
T ss_pred HHHHHHHhCCHhhccCCHHHHHHHHhhCEEEEECCCCEEEcCCCccceEEEEEeeEEEEEEECCCCCEEEEEEeCCCCEe
Confidence 345688999999999999999999999999999999999999999999999999999998 455889999999999
Q ss_pred chhhhhcccCCCceeeEEEecceEEEEEEeHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHhh
Q psy9025 187 GEISLLALAGTNRRTADVRSHGFSNLFVLNKDDLNEAIEYYPNAQEVLKKKARQLIKENAAR 248 (361)
Q Consensus 187 Ge~~ll~~~~~~~~~~~v~A~~~~~~~~l~~~~f~~ll~~~p~~~~~~~~~~~~~l~~~~~~ 248 (361)
|+.+++. +.++.++++|.++|+++.|++++|..++.++|.+...+...+.+++.....+
T Consensus 87 G~~~~~~---~~~~~~~~~a~~~~~v~~i~~~~~~~l~~~~p~~~~~~~~~l~~~l~~~~~~ 145 (237)
T 3fx3_A 87 GEAVALR---NTPYPVSAEAVTPCEVMHIPSPVFVSLMRRDPEICISILATTFGHLHSLVAQ 145 (237)
T ss_dssp CHHHHHH---TCCCSSEEEESSSEEEEEEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHhc---CCCCCceEEECCceEEEEEcHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999998 8899999999999999999999999999999999998888888887765544
No 16
>3e97_A Transcriptional regulator, CRP/FNR family; YP_604437.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.86A {Deinococcus geothermalis dsm 11300}
Probab=99.81 E-value=3.3e-19 Score=156.99 Aligned_cols=131 Identities=22% Similarity=0.333 Sum_probs=120.9
Q ss_pred HHHhccCcccccCCHHHHHHHHHhcceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEE-----eCcEEEEEeCCCCeechh
Q psy9025 115 IQTLSKVQLFQDCDEALLRELVLKLRPVLYLPGDYICRKGEVGKEMYIVKTGQVQVV-----SGETVLATLTEGSVFGEI 189 (361)
Q Consensus 115 ~~~l~~~~~f~~l~~~~l~~l~~~l~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~-----~~~~~~~~l~~Gd~fGe~ 189 (361)
.++|+++|+|..++++.+..++..++.+.|++|++|+++|++++.+|||.+|.|+++ |++.++..+++|++||+.
T Consensus 5 ~~~L~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G~~ 84 (231)
T 3e97_A 5 LDDLKRSPLFQNVPEDAMREALKVVTERNFQPDELVVEQDAEGEALHLVTTGVVRVSRVSLGGRERVLGDIYAPGVVGET 84 (231)
T ss_dssp HHHHHTSGGGTTCCHHHHHHHHHTEEEEEECTTCBCCCTTCTTTCEEEECSSEEEEEEECC--CEEEEEEEESSEEESTT
T ss_pred HHHHhcChhhccCCHHHHHHHHHhcEEEEECCCCEEEeCCCCCCeEEEEEecEEEEEEECCCCceEEEEecCCCCEEeeH
Confidence 468899999999999999999999999999999999999999999999999999998 455889999999999999
Q ss_pred hhhcccCCCceeeEEEecceEEEEEEeHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHhh
Q psy9025 190 SLLALAGTNRRTADVRSHGFSNLFVLNKDDLNEAIEYYPNAQEVLKKKARQLIKENAAR 248 (361)
Q Consensus 190 ~ll~~~~~~~~~~~v~A~~~~~~~~l~~~~f~~ll~~~p~~~~~~~~~~~~~l~~~~~~ 248 (361)
+++. +.++.++++|.++|+++.|++++|..++.++|.+...+.+.+.+++.....+
T Consensus 85 ~~~~---~~~~~~~~~a~~~~~v~~i~~~~~~~l~~~~p~~~~~~~~~l~~~l~~~~~~ 140 (231)
T 3e97_A 85 AVLA---HQERSASVRALTPVRTLMLHREHFELILRRHPRVLWNLAEMLARRVTFLNDE 140 (231)
T ss_dssp TTTC---CCCCCEEEEESSCEEEEEECHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhC---CCCceEEEEECCcEEEEEEeHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
Confidence 9998 8899999999999999999999999999999999988888887777655443
No 17
>3d0s_A Transcriptional regulatory protein; CAMP receptor protein (CRP), dimer, inactive(APO, unliganded allostery, DNA binding, cyclic AMP; 2.00A {Mycobacterium tuberculosis} PDB: 3i54_A* 3i59_A* 3mzh_A* 3h3u_A* 3r6s_A*
Probab=99.81 E-value=2.7e-19 Score=157.10 Aligned_cols=131 Identities=22% Similarity=0.411 Sum_probs=121.2
Q ss_pred HHHhccCcccccCCHHHHHHHHHhcceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEE-----eCcEEEEEeCCCCeechh
Q psy9025 115 IQTLSKVQLFQDCDEALLRELVLKLRPVLYLPGDYICRKGEVGKEMYIVKTGQVQVV-----SGETVLATLTEGSVFGEI 189 (361)
Q Consensus 115 ~~~l~~~~~f~~l~~~~l~~l~~~l~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~-----~~~~~~~~l~~Gd~fGe~ 189 (361)
.++|+++|+|..++++.+..++..++...|++|++|+++|++++.+|||.+|.|+++ |++.++..+++|++||+.
T Consensus 5 ~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~G~~ 84 (227)
T 3d0s_A 5 DEILARAGIFQGVEPSAIAALTKQLQPVDFPRGHTVFAEGEPGDRLYIIISGKVKIGRRAPDGRENLLTIMGPSDMFGEL 84 (227)
T ss_dssp HHHHTTSSTTSSCCSSTTHHHHTTSCEEEECTTCEEECTTCCCCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEESCH
T ss_pred HHHHhcChhhcCCCHHHHHHHHhhCeEEEeCCCCEEEcCCCcCCEEEEEEeeEEEEEEECCCCcEEEEEEecCCCEEeeH
Confidence 467899999999999999999999999999999999999999999999999999998 455789999999999999
Q ss_pred hhhcccCCCceeeEEEecceEEEEEEeHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHhh
Q psy9025 190 SLLALAGTNRRTADVRSHGFSNLFVLNKDDLNEAIEYYPNAQEVLKKKARQLIKENAAR 248 (361)
Q Consensus 190 ~ll~~~~~~~~~~~v~A~~~~~~~~l~~~~f~~ll~~~p~~~~~~~~~~~~~l~~~~~~ 248 (361)
+++. +.++.++++|.++|+++.|++++|..++.++|.+...+...+.+++.....+
T Consensus 85 ~~~~---~~~~~~~~~A~~~~~v~~i~~~~~~~l~~~~p~~~~~~~~~l~~~l~~~~~~ 140 (227)
T 3d0s_A 85 SIFD---PGPRTSSATTITEVRAVSMDRDALRSWIADRPEISEQLLRVLARRLRRTNNN 140 (227)
T ss_dssp HHHS---CSCCSSEEEESSCEEEEEEEHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHcC---CCCceeEEEEcccEEEEEEeHHHHHHHHHHChHHHHHHHHHHHHHHHHHHHH
Confidence 9998 7899999999999999999999999999999999988888888877665433
No 18
>3dv8_A Transcriptional regulator, CRP/FNR family; cyclic nucleotide-binding domain, structural genomics, joint for structural genomics; 2.55A {Eubacterium rectale atcc 33656}
Probab=99.80 E-value=1e-18 Score=152.47 Aligned_cols=129 Identities=11% Similarity=0.102 Sum_probs=118.3
Q ss_pred HHhccCcccccCCHHHHHHHHHhcceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEE-----eCcEEEEEeCCCCe--ech
Q psy9025 116 QTLSKVQLFQDCDEALLRELVLKLRPVLYLPGDYICRKGEVGKEMYIVKTGQVQVV-----SGETVLATLTEGSV--FGE 188 (361)
Q Consensus 116 ~~l~~~~~f~~l~~~~l~~l~~~l~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~-----~~~~~~~~l~~Gd~--fGe 188 (361)
++|+++|+|..|+++.++.+...++.+.|++|++|+++|++++.+|||.+|.|+++ |++.++..+++|++ ||+
T Consensus 3 ~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~~~g~ 82 (220)
T 3dv8_A 3 SFENYFPLWNDLNTAQKKLISDNLITQHVKKGTIIHNGNMDCTGLLLVKSGQLRTYILSDEGREITLYRLFDMDMCLLSA 82 (220)
T ss_dssp --CCSCGGGGTSCHHHHHHHHTTCEEEEECTTCEEEEGGGCCCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEESGGG
T ss_pred chHHhChhhhcCCHHHHHHHHhhCceEEeCCCCEEECCCCCcceEEEEEeceEEEEEECCCCCEEEEEecCCCCeeehhH
Confidence 67899999999999999999999999999999999999999999999999999998 45688999999999 799
Q ss_pred hhhhcccCCCceeeEEEecceEEEEEEeHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHh
Q psy9025 189 ISLLALAGTNRRTADVRSHGFSNLFVLNKDDLNEAIEYYPNAQEVLKKKARQLIKENAA 247 (361)
Q Consensus 189 ~~ll~~~~~~~~~~~v~A~~~~~~~~l~~~~f~~ll~~~p~~~~~~~~~~~~~l~~~~~ 247 (361)
.+++. +.++.++++|.++|+++.|++++|.+++.++|.+...+...+.+++.....
T Consensus 83 ~~~~~---~~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~p~~~~~~~~~l~~~l~~~~~ 138 (220)
T 3dv8_A 83 SCIMR---SIQFEVTIEAEKDTDLWIIPAEIYKGIMKDSAPVANYTNELMATRFSDVMW 138 (220)
T ss_dssp GGGCT---TCCCCCEEEESSCEEEEEEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhC---CCCCceEEEEeeeeEEEEEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
Confidence 99998 889999999999999999999999999999999998888888777765443
No 19
>1zyb_A Transcription regulator, CRP family; NP_813211.1, structural genomics, joint center for structura genomics, JCSG; 2.15A {Bacteroides thetaiotaomicron} SCOP: a.4.5.4 b.82.3.2
Probab=99.80 E-value=9.6e-19 Score=154.32 Aligned_cols=133 Identities=16% Similarity=0.159 Sum_probs=122.7
Q ss_pred HHHHHhccCcccccCCHHHHHHHHHh--cceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEE-----eCcEEEEEeCCCCe
Q psy9025 113 VHIQTLSKVQLFQDCDEALLRELVLK--LRPVLYLPGDYICRKGEVGKEMYIVKTGQVQVV-----SGETVLATLTEGSV 185 (361)
Q Consensus 113 ~~~~~l~~~~~f~~l~~~~l~~l~~~--l~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~-----~~~~~~~~l~~Gd~ 185 (361)
....+++++|+|..++++++..++.. ++...|++|++|+++|++++.+|||.+|.|+++ |++.++..+++|++
T Consensus 15 ~~~~~l~~~~lf~~l~~~~~~~l~~~~~~~~~~~~~ge~i~~~G~~~~~~y~i~~G~v~~~~~~~~G~~~~l~~~~~G~~ 94 (232)
T 1zyb_A 15 TMFDTLLQLPLFQGLCHEDFTSILDKVKLHFIKHKAGETIIKSGNPCTQLCFLLKGEISIVTNAKENIYTVIEQIEAPYL 94 (232)
T ss_dssp HHHTTGGGSGGGTTCCHHHHHHHHHTSCCEEEEECTTCEEECTTSBCCEEEEEEESEEEEEEECGGGSCEEEEEEESSEE
T ss_pred HHHHHHhcCccccCCCHHHHHHHHhhCCcEEEEECCCCEEECCCCcccEEEEEEeeEEEEEEECCCCCEEEEEEccCCCe
Confidence 34578899999999999999999998 999999999999999999999999999999997 45689999999999
Q ss_pred echhhhhcccCCCc-eeeEEEecceEEEEEEeHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHhh
Q psy9025 186 FGEISLLALAGTNR-RTADVRSHGFSNLFVLNKDDLNEAIEYYPNAQEVLKKKARQLIKENAAR 248 (361)
Q Consensus 186 fGe~~ll~~~~~~~-~~~~v~A~~~~~~~~l~~~~f~~ll~~~p~~~~~~~~~~~~~l~~~~~~ 248 (361)
||+.+++. +.+ +.++++|.++|+++.|++++|..++.++|.+...+.+.+.+++.....+
T Consensus 95 fG~~~~~~---~~~~~~~~~~A~~~~~v~~i~~~~~~~l~~~~p~~~~~l~~~l~~~l~~~~~~ 155 (232)
T 1zyb_A 95 IEPQSLFG---MNTNYASSYVAHTEVHTVCISKAFVLSDLFRYDIFRLNYMNIVSNRAQNLYSR 155 (232)
T ss_dssp ECGGGGSS---SCCBCSSEEEESSCEEEEEEEHHHHHHTGGGSHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeehHHhC---CCCCCceEEEEccceEEEEEEHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999997 666 9999999999999999999999999999999999988888888766544
No 20
>3shr_A CGMP-dependent protein kinase 1; cyclic nucleotide binding domains, cyclic nucleotide protein transferase, PKG; HET: CMP; 2.50A {Bos taurus}
Probab=99.80 E-value=6.6e-19 Score=161.26 Aligned_cols=134 Identities=20% Similarity=0.342 Sum_probs=125.8
Q ss_pred HHHhhCCHhHHHHHHHHHHHHHhccCcccccCCHHHHHHHHHhcceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEEeCcE
Q psy9025 96 KILNNLPLKLKTDVAINVHIQTLSKVQLFQDCDEALLRELVLKLRPVLYLPGDYICRKGEVGKEMYIVKTGQVQVVSGET 175 (361)
Q Consensus 96 ~ll~~lp~~Lr~~i~~~~~~~~l~~~~~f~~l~~~~l~~l~~~l~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~~~~ 175 (361)
.-..++|...|.+.......++++++++|+.|+++++..|+..++...|++|++|+++|+.++.+|||.+|.|++..++.
T Consensus 19 ~~~~~~p~~~rs~~~~~~i~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~G~~~~~~yiI~~G~v~v~~~g~ 98 (299)
T 3shr_A 19 GSMQAFRKFTKSERSKDLIKEAILDNDFMKNLELSQIQEIVDCMYPVEYGKDSCIIKEGDVGSLVYVMEDGKVEVTKEGV 98 (299)
T ss_dssp ---CCCCCCCCCHHHHHHHHHHHHTCTTTTTSCHHHHHHHHHHCEEEEECTTCEEECTTCBCCCEEEEEESCEEEEETTE
T ss_pred cccCCCCCcCCCHHHHHHHHHHHhhCHHHHcCCHHHHHHHHHhcCeEEECCCCEEEcCCCcCceEEEEEEEEEEEEECCE
Confidence 34568999999999999999999999999999999999999999999999999999999999999999999999998888
Q ss_pred EEEEeCCCCeechhhhhcccCCCceeeEEEecceEEEEEEeHHHHHHHHHHCHHHHH
Q psy9025 176 VLATLTEGSVFGEISLLALAGTNRRTADVRSHGFSNLFVLNKDDLNEAIEYYPNAQE 232 (361)
Q Consensus 176 ~~~~l~~Gd~fGe~~ll~~~~~~~~~~~v~A~~~~~~~~l~~~~f~~ll~~~p~~~~ 232 (361)
.+..+.+|++||+.+++. +.++.++++|.++|+++.|++++|..++..+|....
T Consensus 99 ~~~~~~~G~~fGe~~ll~---~~~~~~tv~a~~~~~l~~i~~~~~~~i~~~~~~~~~ 152 (299)
T 3shr_A 99 KLCTMGPGKVFGELAILY---NCTRTATVKTLVNVKLWAIDRQCFQTIMMRTGLIKH 152 (299)
T ss_dssp EEEEECTTCEESCSGGGT---TTBCCSEEEESSCEEEEEECHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCeeeHhHHhc---CCCCCcEEEEcCCeEEEEEcHHHHHHHhhHhHHHHH
Confidence 999999999999999998 899999999999999999999999999999997644
No 21
>3iwz_A CAP-like, catabolite activation-like protein; XCC, pathogenicity, CRP, CLP, C-DI-GMP receptor, quorum SENS binding, transcription; 2.30A {Xanthomonas campestris PV}
Probab=99.79 E-value=2.7e-18 Score=150.80 Aligned_cols=131 Identities=16% Similarity=0.267 Sum_probs=109.7
Q ss_pred HHHhccCcccccCCHHHHHHHHHhcceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEE-----eCcEEEEEeCCCCeechh
Q psy9025 115 IQTLSKVQLFQDCDEALLRELVLKLRPVLYLPGDYICRKGEVGKEMYIVKTGQVQVV-----SGETVLATLTEGSVFGEI 189 (361)
Q Consensus 115 ~~~l~~~~~f~~l~~~~l~~l~~~l~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~-----~~~~~~~~l~~Gd~fGe~ 189 (361)
...+++.++|..|++++++.++..++.+.|++|++|+++|++++.+|||.+|.|+++ |++.++..+++|++||+.
T Consensus 10 ~~~lr~~~lf~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G~~ 89 (230)
T 3iwz_A 10 TTTVRNATPSLTLDAGTIERFLAHSHRRRYPTRTDVFRPGDPAGTLYYVISGSVSIIAEEDDDRELVLGYFGSGEFVGEM 89 (230)
T ss_dssp ------------CCHHHHHHHHTTSEEEEECTTCEEECTTSBCCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEESCG
T ss_pred hhhhhhcchhccCCHHHHHHHHHhCeEEEeCCCCEEECCCCCCCeEEEEEeeEEEEEEECCCCCEEEEEEecCCCEEEeh
Confidence 467889999999999999999999999999999999999999999999999999998 456889999999999999
Q ss_pred hhhcccCC-CceeeEEEecceEEEEEEeHHHHHHHHHHC-----HHHHHHHHHHHHHHHHHHHhh
Q psy9025 190 SLLALAGT-NRRTADVRSHGFSNLFVLNKDDLNEAIEYY-----PNAQEVLKKKARQLIKENAAR 248 (361)
Q Consensus 190 ~ll~~~~~-~~~~~~v~A~~~~~~~~l~~~~f~~ll~~~-----p~~~~~~~~~~~~~l~~~~~~ 248 (361)
+++. + .++.++++|.++|+++.|++++|.+++.++ |.+...+...+.+++.....+
T Consensus 90 ~~~~---~~~~~~~~~~a~~~~~v~~i~~~~~~~l~~~~~~~~~p~~~~~~~~~l~~~l~~~~~~ 151 (230)
T 3iwz_A 90 GLFI---ESDTREVILRTRTQCELAEISYERLQQLFQTSLSPDAPRILYAIGVQLSKRLLDTTRK 151 (230)
T ss_dssp GGTS---CCSBCCSEEEESSCEEEEEEEHHHHHHHHHTTTGGGHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhc---CCCCceeEEEEcCcEEEEEEeHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHHHH
Confidence 9997 4 579999999999999999999999999999 999988888888777665433
No 22
>2gau_A Transcriptional regulator, CRP/FNR family; structural genomics, porphyromona gingivalis, PSI, protein structure initiative; 1.90A {Porphyromonas gingivalis} SCOP: a.4.5.4 b.82.3.2
Probab=99.79 E-value=2.4e-18 Score=151.53 Aligned_cols=126 Identities=10% Similarity=0.164 Sum_probs=116.9
Q ss_pred cCcccccCCHHHHHHHHHhcceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEE-----eCcEEEEEeCCCCeechhhhhcc
Q psy9025 120 KVQLFQDCDEALLRELVLKLRPVLYLPGDYICRKGEVGKEMYIVKTGQVQVV-----SGETVLATLTEGSVFGEISLLAL 194 (361)
Q Consensus 120 ~~~~f~~l~~~~l~~l~~~l~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~-----~~~~~~~~l~~Gd~fGe~~ll~~ 194 (361)
.+|+|..++++.+..++..++...|++|++|+++|++++.+|||.+|.|+++ |++.++..+++|++||+.+++.
T Consensus 14 ~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~G~~~~~~- 92 (232)
T 2gau_A 14 LRDVWSLLNEEERELLDKEIQPFPCKKASTVFSEGDIPNNLFYLYEGKIKILREGVYGRFHISRIVKPGQFFGMRPYFA- 92 (232)
T ss_dssp SHHHHTTCCHHHHHHHHHHCEEEEECTTCEEECTTCCCCEEEEEEESCEEEEC-----CCCEEEEECTTCEESHHHHHH-
T ss_pred ccHhhhcCCHHHHHHHHhhCeEEEECCCCEEEeCCCCCCeEEEEEeCEEEEEEECCCCCEEEEEEeCCCCEeeeehhhC-
Confidence 6789999999999999999999999999999999999999999999999998 5668899999999999999998
Q ss_pred cCCCceeeEEEecceEEEEEEeHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHhh
Q psy9025 195 AGTNRRTADVRSHGFSNLFVLNKDDLNEAIEYYPNAQEVLKKKARQLIKENAAR 248 (361)
Q Consensus 195 ~~~~~~~~~v~A~~~~~~~~l~~~~f~~ll~~~p~~~~~~~~~~~~~l~~~~~~ 248 (361)
+.++.++++|.++|+++.|++++|..++.++|.+...+...+.+++.....+
T Consensus 93 --~~~~~~~~~A~~~~~v~~i~~~~~~~l~~~~p~~~~~~~~~l~~~l~~~~~~ 144 (232)
T 2gau_A 93 --EETCSSTAIAVENSKVLAIPVEAIEALLKGNTSFCRYFLKALAKELGYAERR 144 (232)
T ss_dssp --TSCCSSEEEESSCEEEEEEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
T ss_pred --CCCcceEEEEecceEEEEEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
Confidence 7899999999999999999999999999999999998888888877665543
No 23
>3dkw_A DNR protein; CRP-FNR, HTH, beta barrel, dimerization helix, homodimer, transcription regulator; 3.60A {Pseudomonas aeruginosa}
Probab=99.78 E-value=4.6e-19 Score=155.46 Aligned_cols=129 Identities=21% Similarity=0.270 Sum_probs=119.2
Q ss_pred HHHhccCcccccCCHHHHHHHHHhcceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEE-----eCcEEEEEeCCCCeechh
Q psy9025 115 IQTLSKVQLFQDCDEALLRELVLKLRPVLYLPGDYICRKGEVGKEMYIVKTGQVQVV-----SGETVLATLTEGSVFGEI 189 (361)
Q Consensus 115 ~~~l~~~~~f~~l~~~~l~~l~~~l~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~-----~~~~~~~~l~~Gd~fGe~ 189 (361)
.++|+++|+|..++++.+..++..++.+.|++|++|+++|++++.+|||.+|.|+++ |++.++..+++|++||+.
T Consensus 8 ~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G~~ 87 (227)
T 3dkw_A 8 QQLLQSHHLFEPLSPVQLQELLASSDLVNLDKGAYVFRQGEPAHAFYYLISGCVKIYRLTPEGQEKILEVTNERNTFAEA 87 (227)
T ss_dssp HHHHTTSTTTSSSCHHHHHHHHTSCEEEECCTTEEEECTTSBCCEEEEEEESCEECCBCCGGGCCBCCCEECTTEEESCT
T ss_pred HHHHhcChhhcCCCHHHHHHHHhhCEEEEECCCCEEEcCCCccceEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEeeeH
Confidence 478999999999999999999999999999999999999999999999999999998 456789999999999999
Q ss_pred hhhcccCCCc-eeeEEEecceEEEEEEeHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
Q psy9025 190 SLLALAGTNR-RTADVRSHGFSNLFVLNKDDLNEAIEYYPNAQEVLKKKARQLIKENA 246 (361)
Q Consensus 190 ~ll~~~~~~~-~~~~v~A~~~~~~~~l~~~~f~~ll~~~p~~~~~~~~~~~~~l~~~~ 246 (361)
+++. +.+ +.++++|.++|+++.|++++|..++..+|.+...+...+..++....
T Consensus 88 ~~~~---~~~~~~~~~~a~~~~~v~~i~~~~~~~l~~~~p~~~~~~~~~l~~~l~~~~ 142 (227)
T 3dkw_A 88 MMFM---DTPNYVATAQAVVPSQLFRFSNKAYLRQLQDNTPLALALLAKLSTRLHQRI 142 (227)
T ss_dssp TTTT---TCSBCSSCEEESSCCEEEEEESHHHHHHHSSCTHHHHHHHHHHHHHHHHHH
T ss_pred HhcC---CCCCCceEEEEcCcEEEEEEeHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
Confidence 9997 777 99999999999999999999999999999999888887777766543
No 24
>4ava_A Lysine acetyltransferase; allosteric regulation, domain coupling; HET: ACO; 1.70A {Mycobacterium tuberculosis} PDB: 4avb_A* 4avc_A*
Probab=99.78 E-value=4.2e-18 Score=158.34 Aligned_cols=127 Identities=24% Similarity=0.393 Sum_probs=117.7
Q ss_pred HHHhccCcccccCCHHHHHHHHHhcceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEE----eCcEEEEEeCCCCeechhh
Q psy9025 115 IQTLSKVQLFQDCDEALLRELVLKLRPVLYLPGDYICRKGEVGKEMYIVKTGQVQVV----SGETVLATLTEGSVFGEIS 190 (361)
Q Consensus 115 ~~~l~~~~~f~~l~~~~l~~l~~~l~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~----~~~~~~~~l~~Gd~fGe~~ 190 (361)
.++|+++|+|+.|+++++..++..++.+.|++|++|+++|++++.+|||.+|.|+++ ++..++..+++|++||+.+
T Consensus 12 ~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~G~~fGe~~ 91 (333)
T 4ava_A 12 VEDLAGMDVFQGCPAEGLVSLAASVQPLRAAAGQVLLRQGEPAVSFLLISSGSAEVSHVGDDGVAIIARALPGMIVGEIA 91 (333)
T ss_dssp HHHHTTSGGGTTCCHHHHHHHHHHCEEEEECTTCEEECTTSBCCCEEEEEECCEEEEEECTTCCEEEEEECTTCEESHHH
T ss_pred HHHHhCCHhHhcCCHHHHHHHHhhCeEEEECCCCEEEeCCCcCCEEEEEEeeEEEEEEECCCCcEEEEEecCCCEeeHHH
Confidence 478899999999999999999999999999999999999999999999999999998 2335889999999999999
Q ss_pred hhcccCCCceeeEEEecceEEEEEEeHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
Q psy9025 191 LLALAGTNRRTADVRSHGFSNLFVLNKDDLNEAIEYYPNAQEVLKKKARQLIKEN 245 (361)
Q Consensus 191 ll~~~~~~~~~~~v~A~~~~~~~~l~~~~f~~ll~~~p~~~~~~~~~~~~~l~~~ 245 (361)
++. +.++.++++|.++|+++.|++++|..++ ++|.+...+.+.+.+++...
T Consensus 92 l~~---~~~~~~~v~A~~~~~~~~i~~~~~~~l~-~~p~~~~~~~~~~~~~~~~~ 142 (333)
T 4ava_A 92 LLR---DSPRSATVTTIEPLTGWTGGRGAFATMV-HIPGVGERLLRTARQRLAAF 142 (333)
T ss_dssp HHH---TCBCSSEEEESSCEEEEEECHHHHHHHH-HSTTHHHHHHHHHHHHHHHH
T ss_pred hcC---CCCceEEEEEecCEEEEEEcHHHHHHHH-hChHHHHHHHHHHHHHHHhh
Confidence 998 8999999999999999999999999999 99999988888877776643
No 25
>3shr_A CGMP-dependent protein kinase 1; cyclic nucleotide binding domains, cyclic nucleotide protein transferase, PKG; HET: CMP; 2.50A {Bos taurus}
Probab=99.78 E-value=1.8e-18 Score=158.37 Aligned_cols=135 Identities=27% Similarity=0.388 Sum_probs=124.9
Q ss_pred HHHHHHHhccCcccccCCHHHHHHHHHhcceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEEe------CcEEEEEeCCCC
Q psy9025 111 INVHIQTLSKVQLFQDCDEALLRELVLKLRPVLYLPGDYICRKGEVGKEMYIVKTGQVQVVS------GETVLATLTEGS 184 (361)
Q Consensus 111 ~~~~~~~l~~~~~f~~l~~~~l~~l~~~l~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~------~~~~~~~l~~Gd 184 (361)
......+++++++|..++++.+..++..++...|.+|++|+++|++++.+|||.+|.|+++. ++..+..+++|+
T Consensus 152 ~~~~~~~l~~~~~f~~l~~~~l~~l~~~~~~~~~~~g~~I~~~G~~~~~~yiI~~G~v~~~~~~~~~g~~~~~~~l~~G~ 231 (299)
T 3shr_A 152 HTEYMEFLKSVPTFQSLPEEILSKLADVLEETHYENGEYIIRQGARGDTFFIISKGKVNVTREDSPNEDPVFLRTLGKGD 231 (299)
T ss_dssp HHHHHHHHTTSHHHHHSCHHHHHHHTTTCEEEEECTTCEEECTTCEECEEEEEEESEEEEEECCSSSCCCEEEEEEETTC
T ss_pred HHHHHHHHhhCHHhhhCCHHHHHHHHHhccEEEECCCCEEEeCCCCCCEEEEEEeeEEEEEEecCCCCcceEEEEcCCCC
Confidence 34567889999999999999999999999999999999999999999999999999999983 347899999999
Q ss_pred eechhhhhcccCCCceeeEEEecceEEEEEEeHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHhh
Q psy9025 185 VFGEISLLALAGTNRRTADVRSHGFSNLFVLNKDDLNEAIEYYPNAQEVLKKKARQLIKENAAR 248 (361)
Q Consensus 185 ~fGe~~ll~~~~~~~~~~~v~A~~~~~~~~l~~~~f~~ll~~~p~~~~~~~~~~~~~l~~~~~~ 248 (361)
+||+.+++. +.++.++++|.++|+++.|++++|.+++..+|.+...+.+.+.+|++....+
T Consensus 232 ~fGe~~ll~---~~~~~~tv~a~~~~~l~~i~~~~f~~ll~~~p~~~~~~~~~l~~r~~~~~~~ 292 (299)
T 3shr_A 232 WFGEKALQG---EDVRTANVIAAEAVTCLVIDRDSFKHLIGGLDDVSNKAYEDAEAKAKYEAEA 292 (299)
T ss_dssp EECGGGGSS---SEECSSEEEESSSEEEEEEEHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHH
T ss_pred EeChHHHhC---CCCcceEEEECCCEEEEEEeHHHHHHHHccHHHHHHHHHHHHhhhhhcchhh
Confidence 999999998 8899999999999999999999999999999999988888888888876654
No 26
>2d93_A RAP guanine nucleotide exchange factor 6; CNMP_binding domain, PDZ domain containing guanine nucleotide exchange factor 2, PDZ-GEF2, RA-GEF-2; NMR {Homo sapiens}
Probab=99.77 E-value=2.9e-19 Score=143.81 Aligned_cols=125 Identities=15% Similarity=0.185 Sum_probs=108.8
Q ss_pred CHhHHHHHHHHHHHHHhccCcccccCCHHHHHHHHHhcceEEeC-CCCEEEeCCCCCCeEEEEEeeEEEEEeCcEEEEEe
Q psy9025 102 PLKLKTDVAINVHIQTLSKVQLFQDCDEALLRELVLKLRPVLYL-PGDYICRKGEVGKEMYIVKTGQVQVVSGETVLATL 180 (361)
Q Consensus 102 p~~Lr~~i~~~~~~~~l~~~~~f~~l~~~~l~~l~~~l~~~~~~-~ge~I~~~G~~~~~ly~I~~G~v~v~~~~~~~~~l 180 (361)
|+..|.+........+|+++++|..++++.+..++..++.+.|. +|++|+++|+.++.+|||.+|.|+++..+.....+
T Consensus 2 ~p~~r~~~~~~~~~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~g~~~~l 81 (134)
T 2d93_A 2 SSGSSGDDDIEQLLEFMHQLPAFANMTMSVRRELCSVMIFEVVEQAGAIILEDGQELDSWYVILNGTVEISHPDGKVENL 81 (134)
T ss_dssp CCSCCSTTHHHHHHHHHHHSSTTTSSCHHHHHHHTTTEEEEEECSSSCEEECTTCEECEEEECCBSCEEEECSSSCEEEE
T ss_pred ChhhcCHHHHHHHHHHHhCCcchhhCCHHHHHHHHHhheEEEecCCCCEEEeCCCCCCeEEEEEeCEEEEEcCCCcEEEe
Confidence 34444444455667889999999999999999999999999999 99999999999999999999999998432222779
Q ss_pred CCCCeechhhhhcccCCCceeeEE-EecceEEEEEEeHHHHHHHHHHCHH
Q psy9025 181 TEGSVFGEISLLALAGTNRRTADV-RSHGFSNLFVLNKDDLNEAIEYYPN 229 (361)
Q Consensus 181 ~~Gd~fGe~~ll~~~~~~~~~~~v-~A~~~~~~~~l~~~~f~~ll~~~p~ 229 (361)
++|++||+.+++. +.++.+++ +|.++|+++.|++++|..++.+++.
T Consensus 82 ~~G~~fG~~~~~~---~~~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~~~ 128 (134)
T 2d93_A 82 FMGNSFGITPTLD---KQYMHGIVRTKVDDCQFVCIAQQDYWRILNHVEK 128 (134)
T ss_dssp CTTCEESCCSSSC---CEECCSEEEESSSSEEEEEEEHHHHHHHSSCCSS
T ss_pred cCCCccChhHhcC---CCcceeEEEEEecceEEEEEeHHHHHHHHHHHHh
Confidence 9999999999998 78888888 9999999999999999999887764
No 27
>1wgp_A Probable cyclic nucleotide-gated ION channel 6; cyclic nucleotide monophosphate, CNMP, CNMP-binding, structural genomics; NMR {Arabidopsis thaliana} SCOP: b.82.3.2
Probab=99.76 E-value=6.3e-19 Score=142.15 Aligned_cols=113 Identities=26% Similarity=0.438 Sum_probs=101.7
Q ss_pred HHhccCcccccCCHHHHHHHHHhcceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEE----eCcEEEE--EeCCCCeechh
Q psy9025 116 QTLSKVQLFQDCDEALLRELVLKLRPVLYLPGDYICRKGEVGKEMYIVKTGQVQVV----SGETVLA--TLTEGSVFGEI 189 (361)
Q Consensus 116 ~~l~~~~~f~~l~~~~l~~l~~~l~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~----~~~~~~~--~l~~Gd~fGe~ 189 (361)
++|+++|+|..++++.+..++..++.+.|++|++|+++|+.++.+|||.+|.|++. +++.++. .+++|++||+.
T Consensus 6 ~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~g~~~~~~~~~l~~G~~fGe~ 85 (137)
T 1wgp_A 6 SGVRRVPLFENMDERLLDAICERLKPCLFTEKSYLVREGDPVNEMLFIIRGRLESVTTDGGRSGFYNRSLLKEGDFCGDE 85 (137)
T ss_dssp CSCSSCSGGGSCCHHHHHHHHHHCBCCCBCTTEEEECTTSBCSEEEEEEECCCEEECCSSCSSSSSCEEECCTTCBSSTH
T ss_pred HHHHcCcchhhCCHHHHHHHHHHheEEEeCCCCEEEeCCCCCCeEEEEEeeEEEEEEcCCCcceeeeeeeecCCCEecHH
Confidence 46889999999999999999999999999999999999999999999999999976 3334444 99999999999
Q ss_pred hh---hcccCCC------ceeeEEEecceEEEEEEeHHHHHHHHHHCHHHH
Q psy9025 190 SL---LALAGTN------RRTADVRSHGFSNLFVLNKDDLNEAIEYYPNAQ 231 (361)
Q Consensus 190 ~l---l~~~~~~------~~~~~v~A~~~~~~~~l~~~~f~~ll~~~p~~~ 231 (361)
++ +. +. ++.++++|.++|+++.|++++|.+++.++|.+.
T Consensus 86 ~l~~~~~---~~~~~~~~~~~~~~~A~~~~~~~~i~~~~~~~l~~~~p~l~ 133 (137)
T 1wgp_A 86 LLTWALD---PKSGSNLPSSTRTVKALTEVEAFALIADELKFVASQFRRSG 133 (137)
T ss_dssp HHHHHHC---SSCCSSSCBCSSEEEESSCBEEEEEEHHHHHHHHHHHCCCT
T ss_pred HHHHHhc---cccccccccceeEEEEeEEEEEEEECHHHHHHHHHHCHhhH
Confidence 96 65 44 468999999999999999999999999999764
No 28
>3ryp_A Catabolite gene activator; CAMP receptor protein (CRP), allostery, DNA binding cyclic A transcription regulator; HET: CMP; 1.60A {Escherichia coli} PDB: 2cgp_A* 3hif_A 1g6n_A* 3ryr_A* 1i5z_A* 1j59_A* 1lb2_A* 1run_A* 1zrc_A* 1zrd_A* 1zre_A* 1zrf_A* 2gzw_A* 2wc2_A 3iyd_G* 3n4m_A* 3qop_A* 3rdi_A* 3rou_A* 3rpq_A* ...
Probab=99.76 E-value=1.7e-17 Score=143.55 Aligned_cols=123 Identities=19% Similarity=0.291 Sum_probs=109.3
Q ss_pred cccccCCHHHHHHHHHhcceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEE-----eCcEEEEEeCCCCeechhhhhcccC
Q psy9025 122 QLFQDCDEALLRELVLKLRPVLYLPGDYICRKGEVGKEMYIVKTGQVQVV-----SGETVLATLTEGSVFGEISLLALAG 196 (361)
Q Consensus 122 ~~f~~l~~~~l~~l~~~l~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~-----~~~~~~~~l~~Gd~fGe~~ll~~~~ 196 (361)
++++.++++.+..++..++...|++|++|+++|++++.+|||.+|.|+++ |++.++..+++|++||+.+++.
T Consensus 2 ~l~~~l~~~~l~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G~~~~~~--- 78 (210)
T 3ryp_A 2 VLGKPQTDPTLEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFE--- 78 (210)
T ss_dssp -----CCCHHHHHHHTTSEEEEECTTCEEECTTSBCCEEEEEEESEEEEEEECTTCCEEEEEEEETTCEESCTTTTS---
T ss_pred cCCCcCCHHHHHHHHHhcEEEEeCCCCEEECCCCCCCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEeeeHHHhc---
Confidence 46777999999999999999999999999999999999999999999998 4557899999999999999998
Q ss_pred CC-ceeeEEEecceEEEEEEeHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHh
Q psy9025 197 TN-RRTADVRSHGFSNLFVLNKDDLNEAIEYYPNAQEVLKKKARQLIKENAA 247 (361)
Q Consensus 197 ~~-~~~~~v~A~~~~~~~~l~~~~f~~ll~~~p~~~~~~~~~~~~~l~~~~~ 247 (361)
+. ++.++++|.++|+++.|++++|..++.++|.+...+.+.+..++.....
T Consensus 79 ~~~~~~~~~~a~~~~~v~~i~~~~~~~l~~~~p~~~~~~~~~l~~~l~~~~~ 130 (210)
T 3ryp_A 79 EGQERSAWVRAKTACEVAEISYKKFRQLIQVNPDILMRLSAQMARRLQVTSE 130 (210)
T ss_dssp TTCBCSSEEEESSCEEEEEEEHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCceEEEEECCcEEEEEEcHHHHHHHHHHChHHHHHHHHHHHHHHHHHHH
Confidence 55 8999999999999999999999999999999998888888877765543
No 29
>3of1_A CAMP-dependent protein kinase regulatory subunit; cyclic nucleotide binding domain, evolution, PKA signaling, transfer; HET: CMP; 2.21A {Saccharomyces cerevisiae}
Probab=99.75 E-value=5.2e-18 Score=150.35 Aligned_cols=118 Identities=20% Similarity=0.301 Sum_probs=110.8
Q ss_pred HHHHhccCcccccCCHHHHHHHHHhcceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEEeCcEEEEEeCCCCeechhhhhc
Q psy9025 114 HIQTLSKVQLFQDCDEALLRELVLKLRPVLYLPGDYICRKGEVGKEMYIVKTGQVQVVSGETVLATLTEGSVFGEISLLA 193 (361)
Q Consensus 114 ~~~~l~~~~~f~~l~~~~l~~l~~~l~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~~~~~~~~l~~Gd~fGe~~ll~ 193 (361)
..++|+++++|..++++.+..++..++.+.|++|++|+++|++++.+|||.+|.|+++.++..+..+++|++||+.+++.
T Consensus 5 i~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~v~~~~~~~~~~~~g~~fGe~~l~~ 84 (246)
T 3of1_A 5 LEKSIRNNFLFNKLDSDSKRLVINCLEEKSVPKGATIIKQGDQGDYFYVVEKGTVDFYVNDNKVNSSGPGSSFGELALMY 84 (246)
T ss_dssp HHHHHHTCTTTTTSCHHHHHHHHTTCEEEEECTTCEEECTTCCCCEEEEEEECCEEEESTTSCCEEECTTCEECHHHHHH
T ss_pred HHHHHhcCHhhHhCCHHHHHHHHHhhceEEECCCCEEEecCCCCCEEEEEEeeEEEEEECCEEEEecCCCCeeehhHHhc
Confidence 46789999999999999999999999999999999999999999999999999999997666679999999999999998
Q ss_pred ccCCCceeeEEEecceEEEEEEeHHHHHHHHHHCHHHHHHH
Q psy9025 194 LAGTNRRTADVRSHGFSNLFVLNKDDLNEAIEYYPNAQEVL 234 (361)
Q Consensus 194 ~~~~~~~~~~v~A~~~~~~~~l~~~~f~~ll~~~p~~~~~~ 234 (361)
+.++.++++|.++|.++.|++++|..++..+|.....+
T Consensus 85 ---~~~~~~tv~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 122 (246)
T 3of1_A 85 ---NSPRAATVVATSDCLLWALDRLTFRKILLGSSFKKRLM 122 (246)
T ss_dssp ---TCCCSSEEEESSCEEEEEEEHHHHHHTTTTTTSHHHHH
T ss_pred ---CCCCCcEEEECCCeEEEEEEhHHHHHHHHHhHHHHHHH
Confidence 89999999999999999999999999999999765543
No 30
>2qcs_B CAMP-dependent protein kinase type I-alpha regula subunit, CAMP-dependent protein kinase, alpha-catalytic SU; cyclic adenosine monophosphate; HET: SEP TPO ANP TAM; 2.20A {Bos taurus} PDB: 1rl3_A* 1rgs_A* 1ne6_A* 1ne4_A*
Probab=99.75 E-value=1.3e-17 Score=151.85 Aligned_cols=128 Identities=19% Similarity=0.379 Sum_probs=117.5
Q ss_pred HHHHHHHHHHHHhccCcccccCCHHHHHHHHHhcceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEEeCcEEEEEeCCCCe
Q psy9025 106 KTDVAINVHIQTLSKVQLFQDCDEALLRELVLKLRPVLYLPGDYICRKGEVGKEMYIVKTGQVQVVSGETVLATLTEGSV 185 (361)
Q Consensus 106 r~~i~~~~~~~~l~~~~~f~~l~~~~l~~l~~~l~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~~~~~~~~l~~Gd~ 185 (361)
|..-......++|+++++|..|+++.+..++..++...|++|++|+++|+.++.+|||.+|.|+++.++..+..+++|++
T Consensus 29 ks~~~~~~i~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~g~~~~~l~~G~~ 108 (291)
T 2qcs_B 29 KDYKTMAALAKAIEKNVLFSHLDDNERSDIFDAMFPVSFIAGETVIQQGDEGDNFYVIDQGEMDVYVNNEWATSVGEGGS 108 (291)
T ss_dssp CCHHHHHHHHHHTTTCHHHHTSCHHHHHHHHHHCEEEEECTTCEEECTTSBCCEEEEEEECCEEEEETTEEEEEECTTCE
T ss_pred CCHHHHHHHHHHHhcChhhhhCCHHHHHHHHHhccEEEECCCCEEEeCCCCCceEEEEeeeEEEEEECCeEEEEcCCCCc
Confidence 33444556788999999999999999999999999999999999999999999999999999999977788999999999
Q ss_pred echhhhhcccCCCceeeEEEecceEEEEEEeHHHHHHHHHHCHHHHHHHHH
Q psy9025 186 FGEISLLALAGTNRRTADVRSHGFSNLFVLNKDDLNEAIEYYPNAQEVLKK 236 (361)
Q Consensus 186 fGe~~ll~~~~~~~~~~~v~A~~~~~~~~l~~~~f~~ll~~~p~~~~~~~~ 236 (361)
||+.+++. +.++.++++|.++|+++.|++++|..++..+|.+...+..
T Consensus 109 fGe~~l~~---~~~~~~tv~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 156 (291)
T 2qcs_B 109 FGELALIY---GTPRAATVKAKTNVKLWGIDRDSYRRILMGSTLRKRKMYE 156 (291)
T ss_dssp ECGGGGTC---CCBCSSEEEESSCEEEEEEEHHHHHHHHHHHHHHHHHHHH
T ss_pred cchHHHhc---CCCCceEEEECCCEEEEEEEhHHHHHHHhhhHHHHHHHHH
Confidence 99999998 8899999999999999999999999999999998665443
No 31
>3beh_A MLL3241 protein; transmembrane protein, membrane protein; HET: LDA; 3.10A {Mesorhizobium loti} PDB: 2zd9_A*
Probab=99.75 E-value=3.3e-20 Score=174.35 Aligned_cols=127 Identities=31% Similarity=0.457 Sum_probs=0.9
Q ss_pred HHHhccCcccccCCHHHHHHHHHhcceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEEeCcEEEEEeCCCCeechhhhhcc
Q psy9025 115 IQTLSKVQLFQDCDEALLRELVLKLRPVLYLPGDYICRKGEVGKEMYIVKTGQVQVVSGETVLATLTEGSVFGEISLLAL 194 (361)
Q Consensus 115 ~~~l~~~~~f~~l~~~~l~~l~~~l~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~~~~~~~~l~~Gd~fGe~~ll~~ 194 (361)
.+.++++|+|+++++++++.++..++.+.|+||+.|+++||+++.+|||.+|.|+++..+ ...+++|++|||.+++.
T Consensus 227 ~~~l~~~~lf~~ls~~~l~~l~~~~~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~~~--~~~l~~G~~fGe~~~l~- 303 (355)
T 3beh_A 227 WQLVAAVPLFQKLGPAVLVEIVRALRARTVPAGAVICRIGEPGDRMFFVVEGSVSVATPN--PVELGPGAFFGEMALIS- 303 (355)
T ss_dssp HC------------------------------------------------------------------------------
T ss_pred chhhhcccccccCCHHHHHHHHHhceEEEECCCCEEEeCCCcCceEEEEEeeEEEEEECC--eeEECCCCEEeehHHhC-
Confidence 356788999999999999999999999999999999999999999999999999998544 46899999999999998
Q ss_pred cCCCceeeEEEecceEEEEEEeHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
Q psy9025 195 AGTNRRTADVRSHGFSNLFVLNKDDLNEAIEYYPNAQEVLKKKARQLIKENA 246 (361)
Q Consensus 195 ~~~~~~~~~v~A~~~~~~~~l~~~~f~~ll~~~p~~~~~~~~~~~~~l~~~~ 246 (361)
+.++.++++|.++|+++.+++++|.++++++|++...+.+.+.+|+++..
T Consensus 304 --~~~~~~~~~A~~~~~l~~i~~~~f~~ll~~~p~~~~~l~~~l~~rl~~~~ 353 (355)
T 3beh_A 304 --GEPRSATVSAATTVSLLSLHSADFQMLCSSSPEIAEIFRKTALERRGAAA 353 (355)
T ss_dssp ----------------------------------------------------
T ss_pred --CCCcceEEEECccEEEEEEeHHHHHHHHHHCHHHHHHHHHHHHHHHHhhc
Confidence 88999999999999999999999999999999999998888888876543
No 32
>2oz6_A Virulence factor regulator; winged helix, helix-turn-helix, transcription factor, CAMP-B proteins, CAMP receptor protein; HET: CMP; 2.80A {Pseudomonas aeruginosa} SCOP: a.4.5.4 b.82.3.2
Probab=99.75 E-value=4e-17 Score=140.92 Aligned_cols=118 Identities=17% Similarity=0.266 Sum_probs=107.0
Q ss_pred CCHHHHHHHHHhcceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEE-----eCcEEEEEeCCCCeechhhhhcccCCC---
Q psy9025 127 CDEALLRELVLKLRPVLYLPGDYICRKGEVGKEMYIVKTGQVQVV-----SGETVLATLTEGSVFGEISLLALAGTN--- 198 (361)
Q Consensus 127 l~~~~l~~l~~~l~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~-----~~~~~~~~l~~Gd~fGe~~ll~~~~~~--- 198 (361)
|+++++..++..++...|++|++|+++|++++.+|||.+|.|+++ |++.++..+++|++||+.+++. +.
T Consensus 1 l~~~~l~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G~~~~~~---~~~~~ 77 (207)
T 2oz6_A 1 MKLKHLDKLLAHCHRRRYTAKSTIIYAGDRCETLFFIIKGSVTILIEDDDGREMIIGYLNSGDFFGELGLFE---KEGSE 77 (207)
T ss_dssp CCHHHHHHHHHSSEEEEECTTCEEECTTSBCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEESCTTTCC--------
T ss_pred CCHHHHHHHHhhcceEEECCCCEEEcCCCCCCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCCcccHHHhc---CCCCC
Confidence 688999999999999999999999999999999999999999998 4567899999999999999997 56
Q ss_pred -ceeeEEEecceEEEEEEeHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHh
Q psy9025 199 -RRTADVRSHGFSNLFVLNKDDLNEAIEYYPNAQEVLKKKARQLIKENAA 247 (361)
Q Consensus 199 -~~~~~v~A~~~~~~~~l~~~~f~~ll~~~p~~~~~~~~~~~~~l~~~~~ 247 (361)
++.++++|.++|+++.|++++|..++.++|.+...+.+.+.+++.....
T Consensus 78 ~~~~~~~~A~~~~~v~~i~~~~~~~l~~~~p~~~~~~~~~l~~~~~~~~~ 127 (207)
T 2oz6_A 78 QERSAWVRAKVECEVAEISYAKFRELSQQDSEILYTLGSQMADRLRKTTR 127 (207)
T ss_dssp CBCCSEEEESSCEEEEEEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcceEEEECCcEEEEEECHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999999998888877777665543
No 33
>3of1_A CAMP-dependent protein kinase regulatory subunit; cyclic nucleotide binding domain, evolution, PKA signaling, transfer; HET: CMP; 2.21A {Saccharomyces cerevisiae}
Probab=99.74 E-value=2.1e-17 Score=146.37 Aligned_cols=117 Identities=22% Similarity=0.344 Sum_probs=109.1
Q ss_pred HHHHHHhccCcccccCCHHHHHHHHHhcceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEEeCc-EEEEEeCCCCeechhh
Q psy9025 112 NVHIQTLSKVQLFQDCDEALLRELVLKLRPVLYLPGDYICRKGEVGKEMYIVKTGQVQVVSGE-TVLATLTEGSVFGEIS 190 (361)
Q Consensus 112 ~~~~~~l~~~~~f~~l~~~~l~~l~~~l~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~~~-~~~~~l~~Gd~fGe~~ 190 (361)
.+...+++++++|..+++..+..++..++...|.+|++|+++|++++.+|||.+|.|+++... ..+..+++|++||+.+
T Consensus 121 ~~~~~~l~~~~~f~~l~~~~l~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~I~~G~v~v~~~~~~~~~~l~~g~~fGe~~ 200 (246)
T 3of1_A 121 LMYDDLLKSMPVLKSLTTYDRAKLADALDTKIYQPGETIIREGDQGENFYLIEYGAVDVSKKGQGVINKLKDHDYFGEVA 200 (246)
T ss_dssp HHSHHHHHHCGGGTTCCHHHHHHHHHTCEEEEECTTCEEECTTSBCCEEEEEEECEEEEEETTTEEEEEEETTCEECHHH
T ss_pred HHHHHHHhhChhhhcCCHHHHHHHHHhhheEEeCCCCEEEeCCCcCCEEEEEEecEEEEEEcCCceEEEcCCCCcccHHH
Confidence 345678899999999999999999999999999999999999999999999999999999543 3889999999999999
Q ss_pred hhcccCCCceeeEEEecceEEEEEEeHHHHHHHHHHCHHHH
Q psy9025 191 LLALAGTNRRTADVRSHGFSNLFVLNKDDLNEAIEYYPNAQ 231 (361)
Q Consensus 191 ll~~~~~~~~~~~v~A~~~~~~~~l~~~~f~~ll~~~p~~~ 231 (361)
++. +.++.++++|.++|+++.|++++|.+++..+|++.
T Consensus 201 ~~~---~~~~~~~v~a~~~~~~~~i~~~~f~~ll~~~~~~~ 238 (246)
T 3of1_A 201 LLN---DLPRQATVTATKRTKVATLGKSGFQRLLGPAVDVL 238 (246)
T ss_dssp HHH---TCBCSSEEEESSCEEEEEEEHHHHHHHCTTHHHHH
T ss_pred HhC---CCCcccEEEECCCEEEEEEeHHHHHHHhccHHHHH
Confidence 998 89999999999999999999999999999999864
No 34
>4din_B CAMP-dependent protein kinase type I-beta regulat subunit, CAMP-dependent protein kinase catalytic subunit A; isoform diversity; HET: TPO SEP ATP; 3.70A {Homo sapiens}
Probab=99.74 E-value=1.7e-17 Score=157.21 Aligned_cols=127 Identities=21% Similarity=0.373 Sum_probs=117.5
Q ss_pred HHHHHHHHHHHHhccCcccccCCHHHHHHHHHhcceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEEeCcEEEEEeCCCCe
Q psy9025 106 KTDVAINVHIQTLSKVQLFQDCDEALLRELVLKLRPVLYLPGDYICRKGEVGKEMYIVKTGQVQVVSGETVLATLTEGSV 185 (361)
Q Consensus 106 r~~i~~~~~~~~l~~~~~f~~l~~~~l~~l~~~l~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~~~~~~~~l~~Gd~ 185 (361)
|.+-.......+|+++++|++|+++.+..++..+..+.|.+|++|+++|+.++.+|||.+|.|+++.++..+..+++|++
T Consensus 120 ks~~~~~~i~~~l~~~~lF~~L~~~~l~~l~~~~~~~~~~~ge~I~~~Gd~~~~~yiI~~G~v~v~~~~~~v~~l~~G~~ 199 (381)
T 4din_B 120 KDYKTMTALAKAISKNVLFAHLDDNERSDIFDAMFPVTHIAGETVIQQGNEGDNFYVVDQGEVDVYVNGEWVTNISEGGS 199 (381)
T ss_dssp CCHHHHHHHHHHHTTCTTSSSCCHHHHHHHHHHCEEEECCTTCBSSCTTSBCCEEEECSSSEEEEEETTEEEEEEESSCC
T ss_pred CCHHHHHHHHHHHhCChhhhcCCHHHHHHHHHhceEEEECCCCEEEeCCCCCCeEEEEEeeEEEEEECCeEeeeCCCCCE
Confidence 44444566788999999999999999999999999999999999999999999999999999999988888999999999
Q ss_pred echhhhhcccCCCceeeEEEecceEEEEEEeHHHHHHHHHHCHHHHHHHH
Q psy9025 186 FGEISLLALAGTNRRTADVRSHGFSNLFVLNKDDLNEAIEYYPNAQEVLK 235 (361)
Q Consensus 186 fGe~~ll~~~~~~~~~~~v~A~~~~~~~~l~~~~f~~ll~~~p~~~~~~~ 235 (361)
||+.+++. +.++.++++|.++|++|.|++++|..++..+|.+...+.
T Consensus 200 fGe~all~---~~~r~atv~A~~~~~l~~i~~~~f~~ll~~~~~~~~~~~ 246 (381)
T 4din_B 200 FGELALIY---GTPRAATVKAKTDLKLWGIDRDSYRRILMGSTLRKRKMY 246 (381)
T ss_dssp BCGGGGTS---CCBCSSEEEESSSCEEEEEEHHHHHHHHHHHHHHHHHHH
T ss_pred EEchHHhc---CCCcceEEEECCCEEEEEEchHHHHHhhhhhhHHHHHHH
Confidence 99999998 899999999999999999999999999999998865443
No 35
>1o5l_A Transcriptional regulator, CRP family; TM1171, structural GE JCSG, PSI, protein structure initiative, joint center for S genomics; 2.30A {Thermotoga maritima} SCOP: b.82.3.2
Probab=99.72 E-value=3.3e-17 Score=142.47 Aligned_cols=126 Identities=8% Similarity=0.131 Sum_probs=106.0
Q ss_pred cCcccccCCHHHHHHHHHhcceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEE-----eCcEEEEEeCCCCeechhhhhcc
Q psy9025 120 KVQLFQDCDEALLRELVLKLRPVLYLPGDYICRKGEVGKEMYIVKTGQVQVV-----SGETVLATLTEGSVFGEISLLAL 194 (361)
Q Consensus 120 ~~~~f~~l~~~~l~~l~~~l~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~-----~~~~~~~~l~~Gd~fGe~~ll~~ 194 (361)
+-|+|+..++..+..+...++.+.|++|++|+++|++++.+|||.+|.|+++ |++.++..+++|++||+.+++.
T Consensus 3 ~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~i~~~G~~~~~~y~v~~G~v~~~~~~~~G~~~~~~~~~~G~~~G~~~~~~- 81 (213)
T 1o5l_A 3 SDKIHHHHHHMDLKKLLPCGKVIVFRKGEIVKHQDDPIEDVLILLEGTLKTEHVSENGKTLEIDEIKPVQIIASGFIFS- 81 (213)
T ss_dssp ----------CCGGGGGGGSEEEEECTTCEEECTTCBCCEEEEEEESCEEEEEECTTSCEEEEEEECSSEESSGGGTTS-
T ss_pred ccccchhhccCCHHHHhcccEEEEECCCCEEEcCCCccceEEEEEeeEEEEEEECCCCCEEEEEEecCCCEeeeHHHhc-
Confidence 4589999999999999999999999999999999999999999999999998 4558899999999999999987
Q ss_pred cCCC-ceeeEEEecceEEEEEEeHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHhh
Q psy9025 195 AGTN-RRTADVRSHGFSNLFVLNKDDLNEAIEYYPNAQEVLKKKARQLIKENAAR 248 (361)
Q Consensus 195 ~~~~-~~~~~v~A~~~~~~~~l~~~~f~~ll~~~p~~~~~~~~~~~~~l~~~~~~ 248 (361)
+. ++.++++|.++|+++.|++++|.+++.++|.+...+.+.+.+++.....+
T Consensus 82 --~~~~~~~~~~A~~~~~v~~i~~~~~~~l~~~~p~~~~~l~~~l~~~~~~~~~~ 134 (213)
T 1o5l_A 82 --SEPRFPVNVVAGENSKILSIPKEVFLDLLMKDRELLLFFLKDVSEHFRVVSEK 134 (213)
T ss_dssp --SSCBCSSEEEESSSEEEEEEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
T ss_pred --CCCCceEEEEEccceEEEEEeHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
Confidence 55 89999999999999999999999999999999888888777777655433
No 36
>3kcc_A Catabolite gene activator; helix-turn-helix, CAMP, CAMP-binding, DNA-binding nucleotide-binding, transcription, transcription regulation; HET: CMP; 1.66A {Escherichia coli}
Probab=99.72 E-value=9.4e-17 Score=144.07 Aligned_cols=121 Identities=18% Similarity=0.311 Sum_probs=108.0
Q ss_pred ccCCHHHHHHHHHhcceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEE-----eCcEEEEEeCCCCeechhhhhcccCCC-
Q psy9025 125 QDCDEALLRELVLKLRPVLYLPGDYICRKGEVGKEMYIVKTGQVQVV-----SGETVLATLTEGSVFGEISLLALAGTN- 198 (361)
Q Consensus 125 ~~l~~~~l~~l~~~l~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~-----~~~~~~~~l~~Gd~fGe~~ll~~~~~~- 198 (361)
..++++.++.++..++.+.|++|++|+++|++++.+|||.+|.|+++ |++.++..+++|++||+.+++. +.
T Consensus 55 ~~l~~~~l~~l~~~~~~~~~~~ge~i~~~G~~~~~~y~I~~G~v~~~~~~~~G~e~~~~~~~~G~~~Ge~~~~~---~~~ 131 (260)
T 3kcc_A 55 KPQTDPTLEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFE---EGQ 131 (260)
T ss_dssp ----CHHHHHHHTTSEEEEECTTCEEECTTCBCCEEEEEEECEEEEEEECTTCCEEEEEEEETTCEESCTTTTS---TTC
T ss_pred CCCCHHHHHHHHhhCEEEEECCCCEEECCCCcCCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEEeehHHhC---CCC
Confidence 55999999999999999999999999999999999999999999998 4557899999999999999998 56
Q ss_pred ceeeEEEecceEEEEEEeHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHhh
Q psy9025 199 RRTADVRSHGFSNLFVLNKDDLNEAIEYYPNAQEVLKKKARQLIKENAAR 248 (361)
Q Consensus 199 ~~~~~v~A~~~~~~~~l~~~~f~~ll~~~p~~~~~~~~~~~~~l~~~~~~ 248 (361)
++.++++|.++|+++.|++++|..++.++|.+...+.+.+..++.....+
T Consensus 132 ~~~~~~~A~~~~~l~~i~~~~~~~l~~~~p~l~~~l~~~l~~~l~~~~~~ 181 (260)
T 3kcc_A 132 ERSAWVRAKTACEVAEISYKKFRQLIQVNPDILMRLSAQMARRLQVTSEK 181 (260)
T ss_dssp BCCSEEEESSCEEEEEEEHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHH
T ss_pred CCceEEEECCCeEEEEEcHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999988888888777665433
No 37
>2qcs_B CAMP-dependent protein kinase type I-alpha regula subunit, CAMP-dependent protein kinase, alpha-catalytic SU; cyclic adenosine monophosphate; HET: SEP TPO ANP TAM; 2.20A {Bos taurus} PDB: 1rl3_A* 1rgs_A* 1ne6_A* 1ne4_A*
Probab=99.72 E-value=7.5e-17 Score=146.81 Aligned_cols=122 Identities=23% Similarity=0.305 Sum_probs=111.8
Q ss_pred HHHHHHHhccCcccccCCHHHHHHHHHhcceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEEe------CcEEEEEeCCCC
Q psy9025 111 INVHIQTLSKVQLFQDCDEALLRELVLKLRPVLYLPGDYICRKGEVGKEMYIVKTGQVQVVS------GETVLATLTEGS 184 (361)
Q Consensus 111 ~~~~~~~l~~~~~f~~l~~~~l~~l~~~l~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~------~~~~~~~l~~Gd 184 (361)
......+++++++|..++...+..++..++...|.+|++|+++|++++.+|||.+|.|+++. +...+..+++|+
T Consensus 152 ~~~~~~~l~~~~lf~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~~~~~~~~~~l~~G~ 231 (291)
T 2qcs_B 152 RKMYEEFLSKVSILESLDKWERLTVADALEPVQFEDGQKIVVQGEPGDEFFIILEGSAAVLQRRSENEEFVEVGRLGPSD 231 (291)
T ss_dssp HHHHHHHHHTCGGGTTCCHHHHHHHHHHCEEEEECTTCEEECTTSCCCEEEEEEEEEEEEEEECSTTSCEEEEEEECTTC
T ss_pred HHHHHHHHhhchHhhhCCHHHHHHHHhhcEEEEECCCCEEEeCCccCCEEEEEEeCEEEEEEecCCCCccEEEEEeCCCC
Confidence 34556788999999999999999999999999999999999999999999999999999982 237899999999
Q ss_pred eechhhhhcccCCCceeeEEEecceEEEEEEeHHHHHHHHHHCHHHHHHHH
Q psy9025 185 VFGEISLLALAGTNRRTADVRSHGFSNLFVLNKDDLNEAIEYYPNAQEVLK 235 (361)
Q Consensus 185 ~fGe~~ll~~~~~~~~~~~v~A~~~~~~~~l~~~~f~~ll~~~p~~~~~~~ 235 (361)
+|||.+++. +.++.++++|.++|+++.|++++|..++..+|++...+.
T Consensus 232 ~fGe~~ll~---~~~~~~tv~a~~~~~~~~i~~~~f~~~l~~~p~~~~~~~ 279 (291)
T 2qcs_B 232 YFGEIALLM---NRPKAATVVARGPLKCVKLDRPRFERVLGPCSDILKRNI 279 (291)
T ss_dssp EECSGGGTC---CCCCSSEEEEEEEEEEEEEEHHHHHHHHCCHHHHHTTSH
T ss_pred EecHHHHcC---CCCcceEEEECCcEEEEEEcHHHHHHHhccHHHHHHHHH
Confidence 999999998 889999999999999999999999999999999765443
No 38
>3tnp_B CAMP-dependent protein kinase type II-beta regula subunit; PKA RIIB tetrameric holoenzyme, transferase; HET: SEP TPO; 2.30A {Mus musculus} PDB: 3tnq_A* 1cx4_A* 2qvs_B*
Probab=99.72 E-value=5.4e-17 Score=155.48 Aligned_cols=123 Identities=17% Similarity=0.310 Sum_probs=114.2
Q ss_pred HHHHHHHHHHHHhccCcccccCCHHHHHHHHHhcceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEE----eCcEEEEEeC
Q psy9025 106 KTDVAINVHIQTLSKVQLFQDCDEALLRELVLKLRPVLYLPGDYICRKGEVGKEMYIVKTGQVQVV----SGETVLATLT 181 (361)
Q Consensus 106 r~~i~~~~~~~~l~~~~~f~~l~~~~l~~l~~~l~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~----~~~~~~~~l~ 181 (361)
|.+-.......+|+++++|++|+++.+..|+..+..+.|.+|++|+++|+.++.+|||.+|.|+++ |.+..+..+.
T Consensus 135 ks~~~~~~i~~~L~~~~lF~~L~~~~l~~l~~~~~~~~~~~Ge~I~~qGd~~d~~YiI~sG~v~v~~~~~G~~~~v~~l~ 214 (416)
T 3tnp_B 135 KTDDQRNRLQEACKDILLFKNLDPEQMSQVLDAMFEKLVKEGEHVIDQGDDGDNFYVIDRGTFDIYVKCDGVGRCVGNYD 214 (416)
T ss_dssp CCHHHHHHHHHHHTTSHHHHTCCHHHHHHHHHHCEEEEECTTCEEECTTSCCCEEEEEEECEEEEEEECSSCEEEEEEEE
T ss_pred CCHHHHHHHHHHHhCCHhHhcCCHHHHHHHHHhcEEEEeCCCCEEEeCCCCCceEEEEEeeEEEEEEecCCCEEEEEEec
Confidence 444556677899999999999999999999999999999999999999999999999999999998 3468899999
Q ss_pred CCCeechhhhhcccCCCceeeEEEecceEEEEEEeHHHHHHHHHHCHHHH
Q psy9025 182 EGSVFGEISLLALAGTNRRTADVRSHGFSNLFVLNKDDLNEAIEYYPNAQ 231 (361)
Q Consensus 182 ~Gd~fGe~~ll~~~~~~~~~~~v~A~~~~~~~~l~~~~f~~ll~~~p~~~ 231 (361)
+|++||+.+++. +.++.++++|.++|.+|.|++++|..++..+|.+.
T Consensus 215 ~G~~fGe~all~---~~pr~atv~A~~d~~l~~i~r~~f~~ll~~~~~~~ 261 (416)
T 3tnp_B 215 NRGSFGELALMY---NTPKAATITATSPGALWGLDRVTFRRIIVKNNAKK 261 (416)
T ss_dssp SCCEECGGGGTS---CCCCSSEEEESSSEEEEEEEHHHHHHHHHHHHHHH
T ss_pred CCCEEeeHHHhc---CCCcccEEEEccCeEEEEEeehhhhhhhhcchhHH
Confidence 999999999998 89999999999999999999999999999988864
No 39
>2fmy_A COOA, carbon monoxide oxidation system transcription RE COOA-1; DNA transcription regulator, DNA binding protein; HET: HEM; 2.20A {Carboxydothermus hydrogenoformans} PDB: 2hkx_A*
Probab=99.71 E-value=4e-17 Score=142.52 Aligned_cols=122 Identities=16% Similarity=0.258 Sum_probs=111.6
Q ss_pred HHhccCcccccCCHHHHHHHHHhcceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEE----eCcEEEEEeCCCCeechhhh
Q psy9025 116 QTLSKVQLFQDCDEALLRELVLKLRPVLYLPGDYICRKGEVGKEMYIVKTGQVQVV----SGETVLATLTEGSVFGEISL 191 (361)
Q Consensus 116 ~~l~~~~~f~~l~~~~l~~l~~~l~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~----~~~~~~~~l~~Gd~fGe~~l 191 (361)
.+|+++|+|..++++.+..++..++...|++|++|+++|++++.+|||.+|.|+++ |++.++..+++|++||+
T Consensus 4 ~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~G~~~~~~~~~~G~~~G~--- 80 (220)
T 2fmy_A 4 MRLTDTNLLEVLNSEEYSGVLKEFREQRYSKKAILYTPNTERNLVFLVKSGRVRVYLAYEDKEFTLAILEAGDIFCT--- 80 (220)
T ss_dssp TCSCSSCHHHHTTSGGGTTTGGGSEEEEECTTCEEECTTCSSCEEEEEEESEEEEEEECSSCEEEEEEEETTCEEES---
T ss_pred hhhhcChhhhcCCHHHHHHHHHhhheeEeCCCCEEECCCCCCCeEEEEEecEEEEEECCCCCEEEEEEcCCCCEeCC---
Confidence 46889999999999999999999999999999999999999999999999999996 45688999999999998
Q ss_pred hcccCCCceeeEEEecceEEEEEEeHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHh
Q psy9025 192 LALAGTNRRTADVRSHGFSNLFVLNKDDLNEAIEYYPNAQEVLKKKARQLIKENAA 247 (361)
Q Consensus 192 l~~~~~~~~~~~v~A~~~~~~~~l~~~~f~~ll~~~p~~~~~~~~~~~~~l~~~~~ 247 (361)
++.++++|.++|+++.||+++|..++.++|.+...+...+.+++.....
T Consensus 81 -------~~~~~~~A~~~~~v~~i~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~ 129 (220)
T 2fmy_A 81 -------HTRAFIQAMEDTTILYTDIRNFQNIVVEFPAFSLNMVKVLGDLLKNSLT 129 (220)
T ss_dssp -------CSSSEEEESSSEEEEEEEHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHH
T ss_pred -------ccceEEEEcCcEEEEEEeHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
Confidence 4578999999999999999999999999999998888888877765543
No 40
>4din_B CAMP-dependent protein kinase type I-beta regulat subunit, CAMP-dependent protein kinase catalytic subunit A; isoform diversity; HET: TPO SEP ATP; 3.70A {Homo sapiens}
Probab=99.70 E-value=3.8e-17 Score=154.81 Aligned_cols=127 Identities=22% Similarity=0.314 Sum_probs=114.6
Q ss_pred HHHHHHHhccCcccccCCHHHHHHHHHhcceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEEe-----C-cEEEEEeCCCC
Q psy9025 111 INVHIQTLSKVQLFQDCDEALLRELVLKLRPVLYLPGDYICRKGEVGKEMYIVKTGQVQVVS-----G-ETVLATLTEGS 184 (361)
Q Consensus 111 ~~~~~~~l~~~~~f~~l~~~~l~~l~~~l~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~-----~-~~~~~~l~~Gd 184 (361)
..++..+++++++|..+++..+..++..++...|.+|++|+++|+.++.+|||.+|.|+++. + ...+..+++|+
T Consensus 243 ~~~~~~~L~~v~~f~~Ls~~el~~l~~~~~~~~~~~ge~I~~eGd~~~~~yiI~~G~v~v~~~~~~~~~~~~v~~l~~Gd 322 (381)
T 4din_B 243 RKMYEEFLSKVSILESLEKWERLTVADALEPVQFEDGEKIVVQGEPGDDFYIITEGTASVLQRRSPNEEYVEVGRLGPSD 322 (381)
T ss_dssp HHHHHHHHHHCSTTTTCCTTHHHHHHTTCBCCCBCSSCBSSCTTSBCCEEEEEEESCEEEECCSSSSSCCCEEEEECTTC
T ss_pred HHHHHHHhhhhHHHHhccHHHHHHHHHhhhhccCCCCCEEEeCCCcCCEEEEEEeCEEEEEEecCCCCceEEEEEeCCCC
Confidence 34566899999999999999999999999999999999999999999999999999999982 2 45789999999
Q ss_pred eechhhhhcccCCCceeeEEEecceEEEEEEeHHHHHHHHHHCHHHHHHHHHHHHH
Q psy9025 185 VFGEISLLALAGTNRRTADVRSHGFSNLFVLNKDDLNEAIEYYPNAQEVLKKKARQ 240 (361)
Q Consensus 185 ~fGe~~ll~~~~~~~~~~~v~A~~~~~~~~l~~~~f~~ll~~~p~~~~~~~~~~~~ 240 (361)
+||+.+++. +.++.++++|.++|.|+.|++++|..++..+|++.+........
T Consensus 323 ~fGe~all~---~~~r~~tv~A~~~~~ll~i~~~~f~~ll~~~~~i~~~~~~~~~~ 375 (381)
T 4din_B 323 YFGEIALLL---NRPRAATVVARGPLKCVKLDRPRFERVLGPCSEILKRNIQRYNS 375 (381)
T ss_dssp EECTTGGGS---CCBCSSEEEESSCBEEEEEEHHHHHHHHCCHHHHHHTTHHHHHH
T ss_pred EechHHHhC---CCCceeEEEEcCCEEEEEEeHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 999999998 88999999999999999999999999999999986654444433
No 41
>3e6c_C CPRK, cyclic nucleotide-binding protein; CPRK, halorespiration; HET: DNA 3C4; 1.80A {Desulfitobacterium hafniense} SCOP: a.4.5.4 b.82.3.2 PDB: 3e6b_A* 3e5u_C* 3e6d_A 3e5x_A* 3e5q_A 2h6b_A* 2h6c_A
Probab=99.70 E-value=9.7e-17 Score=142.99 Aligned_cols=128 Identities=13% Similarity=0.029 Sum_probs=114.6
Q ss_pred HHHhccCcccccCCHHHHHHHHHhcceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEE-----eCcEEEEEeCCCCeechh
Q psy9025 115 IQTLSKVQLFQDCDEALLRELVLKLRPVLYLPGDYICRKGEVGKEMYIVKTGQVQVV-----SGETVLATLTEGSVFGEI 189 (361)
Q Consensus 115 ~~~l~~~~~f~~l~~~~l~~l~~~l~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~-----~~~~~~~~l~~Gd~fGe~ 189 (361)
..++....++..|+++++..++..++.+.|++|++|+++|++++.+|||.+|.|+++ |++.++..+++|++||+
T Consensus 8 ~~~~~~~~p~~~l~~~~l~~l~~~~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~G~- 86 (250)
T 3e6c_C 8 KDFCGAIIPDNFFPIEKLRNYTQMGLIRDFAKGSAVIMPGEEITSMIFLVEGKIKLDIIFEDGSEKLLYYAGGNSLIGK- 86 (250)
T ss_dssp -CCCCCSSSBSCSCCGGGGGGGGGSEEEEECTTCEEECTTCCCCSEEEEEESCEEEEEECTTSCEEEEEEECTTCEECC-
T ss_pred hhhhhhccchhhCCHHHHHHHHhhCeEEEECCCCEEECCCCCCCeEEEEEeeEEEEEEECCCCCEEEEEEecCCCEEee-
Confidence 345566667799999999999999999999999999999999999999999999998 45688999999999999
Q ss_pred hhhcccCCCceeeEEEecceEEEEEEeHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHhh
Q psy9025 190 SLLALAGTNRRTADVRSHGFSNLFVLNKDDLNEAIEYYPNAQEVLKKKARQLIKENAAR 248 (361)
Q Consensus 190 ~ll~~~~~~~~~~~v~A~~~~~~~~l~~~~f~~ll~~~p~~~~~~~~~~~~~l~~~~~~ 248 (361)
++. +. +.++++|.++|+++.|++++|..++.++|.+...+...+.+++.....+
T Consensus 87 -~l~---~~-~~~~~~A~~~~~v~~i~~~~~~~l~~~~p~~~~~l~~~l~~~l~~~~~~ 140 (250)
T 3e6c_C 87 -LYP---TG-NNIYATAMEPTRTCWFSEKSLRTVFRTDEDMIFEIFKNYLTKVAYYARQ 140 (250)
T ss_dssp -CSC---CS-CCEEEEESSSEEEEEECHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHH
T ss_pred -ecC---CC-CceEEEEcccEEEEEEcHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
Confidence 666 66 9999999999999999999999999999999998888888887765544
No 42
>1o7f_A CAMP-dependent RAP1 guanine-nucleotide exchange factor; EPAC2, CAMP-GEF2, campb binding doamin, regulation; 2.5A {Mus musculus} SCOP: a.4.5.31 b.82.3.2 b.82.3.2
Probab=99.70 E-value=1.1e-16 Score=155.81 Aligned_cols=129 Identities=23% Similarity=0.323 Sum_probs=110.2
Q ss_pred HHHHHHHHHHhccCcccccCCHHHHHHHHHhcce-EEeCCCCEEEeCCCCCCeEEEEEeeEEEEEeC-cEEEEEeCCCCe
Q psy9025 108 DVAINVHIQTLSKVQLFQDCDEALLRELVLKLRP-VLYLPGDYICRKGEVGKEMYIVKTGQVQVVSG-ETVLATLTEGSV 185 (361)
Q Consensus 108 ~i~~~~~~~~l~~~~~f~~l~~~~l~~l~~~l~~-~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~~-~~~~~~l~~Gd~ 185 (361)
.-......++++++++|..++++.+..++..+.. ..|++|++|+++|+.++.+|||.+|.|+++.. ...+..+++|++
T Consensus 329 ~~~~~~~~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~~g~~i~~~G~~~~~~yiI~~G~v~v~~~~~~~~~~l~~G~~ 408 (469)
T 1o7f_A 329 VDDLEIIYDELLHIKALSHLSTTVKRELAGVLIFESHAKGGTVLFNQGEEGTSWYIILKGSVNVVIYGKGVVCTLHEGDD 408 (469)
T ss_dssp HHHHHHHHHHHTTCGGGTTSCHHHHHHHHHHCEEEEECSTTCEEECTTSCCCEEEEEEESEEEEEETTTEEEEEEETTCE
T ss_pred HHHHHHHHHHHhcCHhhhhCCHHHHHHHHHHhheeeEecCCCEEEeCCCcCCeEEEEEEeEEEEEEcCCeeEEEecCCCE
Confidence 3345556789999999999999999999999985 49999999999999999999999999999843 358999999999
Q ss_pred echhhhhcccCCCceeeEEEecc-eEEEEEEeHHHHHHHHHHCHHHHHHHHHHHH
Q psy9025 186 FGEISLLALAGTNRRTADVRSHG-FSNLFVLNKDDLNEAIEYYPNAQEVLKKKAR 239 (361)
Q Consensus 186 fGe~~ll~~~~~~~~~~~v~A~~-~~~~~~l~~~~f~~ll~~~p~~~~~~~~~~~ 239 (361)
||+.+++. +.++.++++|.+ +|+++.|++++|..++..+|.+...+.....
T Consensus 409 fGe~~ll~---~~~~~~tv~a~~~~~~~~~i~~~~f~~ll~~~p~~~~~l~e~~~ 460 (469)
T 1o7f_A 409 FGKLALVN---DAPRAASIVLREDNCHFLRVDKEDFNRILRDVEANTVRLKEHDQ 460 (469)
T ss_dssp ECGGGGTC---CSCCSSEEEESSSSEEEEEEEHHHHHHHHHHTTCC---------
T ss_pred EEEehhhc---CCCceEEEEEecCCEEEEEEcHHHHHHHHHHChHHHHHHHhcCc
Confidence 99999998 889999999998 6999999999999999999998776655443
No 43
>3tnp_B CAMP-dependent protein kinase type II-beta regula subunit; PKA RIIB tetrameric holoenzyme, transferase; HET: SEP TPO; 2.30A {Mus musculus} PDB: 3tnq_A* 1cx4_A* 2qvs_B*
Probab=99.69 E-value=7.3e-17 Score=154.54 Aligned_cols=128 Identities=15% Similarity=0.276 Sum_probs=108.9
Q ss_pred HHHhccCcccccCCHHHHHHHHHhcceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEEe-----------CcEEEEEeCCC
Q psy9025 115 IQTLSKVQLFQDCDEALLRELVLKLRPVLYLPGDYICRKGEVGKEMYIVKTGQVQVVS-----------GETVLATLTEG 183 (361)
Q Consensus 115 ~~~l~~~~~f~~l~~~~l~~l~~~l~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~-----------~~~~~~~l~~G 183 (361)
..+++++++|..+++..+..++..+....|.+|++|+++|+.++.+|||.+|.|+++. ++..+..+++|
T Consensus 266 ~~~L~~v~lf~~Ls~~el~~L~~~l~~~~~~~Ge~I~~eGd~~~~~yiI~sG~v~v~~~~~~~~~~~~g~~~~l~~l~~G 345 (416)
T 3tnp_B 266 ESFIESLPFLKSLEVSERLKVVDVIGTKVYNDGEQIIAQGDLADSFFIVESGEVKITMKRKGKSEVEENGAVEIARCFRG 345 (416)
T ss_dssp SSSGGGCGGGTTCCHHHHHHHHHHCEEEEECTTCEEECTTSCCCEEEEEEEEEEEEECC------------CEEEEECTT
T ss_pred HHHHhhchHhhcCCHHHHHHHHhhceEEEECCCCEEEeCCCcCCEEEEEEeCEEEEEEecCCcccccCCceeEEEEeCCC
Confidence 3578899999999999999999999999999999999999999999999999999982 23678999999
Q ss_pred CeechhhhhcccCCCceeeEEEecceEEEEEEeHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
Q psy9025 184 SVFGEISLLALAGTNRRTADVRSHGFSNLFVLNKDDLNEAIEYYPNAQEVLKKKARQLIKEN 245 (361)
Q Consensus 184 d~fGe~~ll~~~~~~~~~~~v~A~~~~~~~~l~~~~f~~ll~~~p~~~~~~~~~~~~~l~~~ 245 (361)
++||+.+++. +.++.++++|.++|.|+.|++++|..++..+|++...+.....+++...
T Consensus 346 ~~fGE~all~---~~~r~~tv~A~~~~~ll~I~~~~f~~ll~~~p~i~~~~~~~~~~~L~~~ 404 (416)
T 3tnp_B 346 QYFGELALVT---NKPRAASAHAIGTVKCLAMDVQAFERLLGPCMEIMKRNIATYEEQLVAL 404 (416)
T ss_dssp CEESGGGGTC---CSCCSSEEEEEEEEEEEEEEHHHHHHHHCCHHHHHTCC-----------
T ss_pred CEecHHHHhC---CCCceeEEEEcCCeEEEEEEHHHHHHHhcchHHHHHHHHHHHHHHHHHH
Confidence 9999999998 8999999999999999999999999999999998776666666665543
No 44
>1o7f_A CAMP-dependent RAP1 guanine-nucleotide exchange factor; EPAC2, CAMP-GEF2, campb binding doamin, regulation; 2.5A {Mus musculus} SCOP: a.4.5.31 b.82.3.2 b.82.3.2
Probab=99.69 E-value=9.8e-17 Score=156.04 Aligned_cols=130 Identities=22% Similarity=0.317 Sum_probs=120.2
Q ss_pred hCCHhHHHHHHHHHHHHHhccCcccccCCHHHHHHHHHhcceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEEe-----C-
Q psy9025 100 NLPLKLKTDVAINVHIQTLSKVQLFQDCDEALLRELVLKLRPVLYLPGDYICRKGEVGKEMYIVKTGQVQVVS-----G- 173 (361)
Q Consensus 100 ~lp~~Lr~~i~~~~~~~~l~~~~~f~~l~~~~l~~l~~~l~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~-----~- 173 (361)
..|+..|.+........+|+++++|..|+++++..++..+....|++|++|+++|++++.+|||.+|.|+++. +
T Consensus 26 ~~~~~~rt~~~~~~i~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~Gd~~~~~y~i~~G~v~v~~~~~~g~~ 105 (469)
T 1o7f_A 26 DKRPLERSSEDVDIIFTRLKGVKAFEKFHPNLLRQICLCGYYENLEKGITLFRQGDIGTNWYAVLAGSLDVKVSETSSHQ 105 (469)
T ss_dssp TSCSTTCCHHHHHHHHHHHTTCTTTTTCCHHHHHHHHHHCEEEEECTTCEEECTTSBCCEEEEEEESCEEEEECSSSCGG
T ss_pred cCChhhCCHHHHHHHHHHHhCCHhhhcCCHHHHHHHHHhceEEEECCCCEEEeCCCCCCcEEEEEeeEEEEEEecCCCCC
Confidence 4677888888888889999999999999999999999999999999999999999999999999999999982 1
Q ss_pred -cEEEEEeCCCCeechhhhhcccCCCceeeEEEecceEEEEEEeHHHHHHHHHHCHHHHHH
Q psy9025 174 -ETVLATLTEGSVFGEISLLALAGTNRRTADVRSHGFSNLFVLNKDDLNEAIEYYPNAQEV 233 (361)
Q Consensus 174 -~~~~~~l~~Gd~fGe~~ll~~~~~~~~~~~v~A~~~~~~~~l~~~~f~~ll~~~p~~~~~ 233 (361)
+..+..+++|++||+.+ +. +.++.++++|.++|+++.|++++|..++.++|.+...
T Consensus 106 ~~~~~~~~~~G~~fGe~~-l~---~~~~~~tv~A~~~~~l~~i~~~~~~~l~~~~p~~~~~ 162 (469)
T 1o7f_A 106 DAVTICTLGIGTAFGESI-LD---NTPRHATIVTRESSELLRIEQEDFKALWEKYRQYMAG 162 (469)
T ss_dssp GCEEEEEECTTCEECGGG-GG---TCBCSSEEEESSSEEEEEEEHHHHHHHHHHHGGGTTT
T ss_pred cceEEEEccCCCCcchhh-hC---CCCccceEEEccceeEEEEcHHHHHHHHHhCHHHHHH
Confidence 37899999999999999 87 8999999999999999999999999999999986543
No 45
>1ft9_A Carbon monoxide oxidation system transcription regulator; heme sensor, catabolite gene activator protein; HET: HEM; 2.60A {Rhodospirillum rubrum} SCOP: a.4.5.4 b.82.3.1
Probab=99.69 E-value=6.7e-17 Score=141.37 Aligned_cols=122 Identities=12% Similarity=0.134 Sum_probs=109.9
Q ss_pred HhccCcccccCCHHHHHHHHHhcceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEE----eCcEEEEEeCCCCeechhhhh
Q psy9025 117 TLSKVQLFQDCDEALLRELVLKLRPVLYLPGDYICRKGEVGKEMYIVKTGQVQVV----SGETVLATLTEGSVFGEISLL 192 (361)
Q Consensus 117 ~l~~~~~f~~l~~~~l~~l~~~l~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~----~~~~~~~~l~~Gd~fGe~~ll 192 (361)
+|+++|+|..++++.+..++..++.+.|++|++|+++|++++.+|||.+|.|+++ |++.++..+++|++||
T Consensus 1 ~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~G~~~~~~~~~~G~~fG----- 75 (222)
T 1ft9_A 1 MPPRFNIANVLLSPDGETFFRGFRSKIHAKGSLVCTGEGDENGVFVVVDGRLRVYLVGEEREISLFYLTSGDMFC----- 75 (222)
T ss_dssp -CCCCCTHHHHTSTTTTTTTTTCEEEEECTTCEEECTTCCCCCEEEEEESEEEEEEEETTEEEEEEEEETTCEEE-----
T ss_pred CcccchhhhcCCHHHHHHHHhhCcEEEECCCCEEECCCCCCCeEEEEEecEEEEEECCCCCEEEEEEcCCCCEec-----
Confidence 4788999999999999999999999999999999999999999999999999996 3457889999999999
Q ss_pred cccCCCceeeEEEecceEEEEEEeHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHhh
Q psy9025 193 ALAGTNRRTADVRSHGFSNLFVLNKDDLNEAIEYYPNAQEVLKKKARQLIKENAAR 248 (361)
Q Consensus 193 ~~~~~~~~~~~v~A~~~~~~~~l~~~~f~~ll~~~p~~~~~~~~~~~~~l~~~~~~ 248 (361)
.++.++++|.++|+++.|++++|..++.++|.+...+...+.+++.....+
T Consensus 76 -----~~~~~~~~A~~~~~v~~i~~~~~~~l~~~~p~~~~~~~~~l~~~l~~~~~~ 126 (222)
T 1ft9_A 76 -----MHSGCLVEATERTEVRFADIRTFEQKLQTCPSMAWGLIAILGRALTSCMRT 126 (222)
T ss_dssp -----SCSSCEEEESSCEEEEEECHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHH
T ss_pred -----CCCCEEEEEccceEEEEEeHHHHHHHHHHChHHHHHHHHHHHHHHHHHHHH
Confidence 256789999999999999999999999999999988888888777665433
No 46
>4f7z_A RAP guanine nucleotide exchange factor 4; cyclic nucleotide, regulation, auto-IN CDC25 homology domain, exocytosis; 2.60A {Mus musculus} PDB: 2byv_E
Probab=99.64 E-value=1.1e-15 Score=161.74 Aligned_cols=132 Identities=24% Similarity=0.381 Sum_probs=116.3
Q ss_pred HHHhhCCHhHHHHHHHHHHHHHhccCcccccCCHHHHHHHHHhcceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEEe---
Q psy9025 96 KILNNLPLKLKTDVAINVHIQTLSKVQLFQDCDEALLRELVLKLRPVLYLPGDYICRKGEVGKEMYIVKTGQVQVVS--- 172 (361)
Q Consensus 96 ~ll~~lp~~Lr~~i~~~~~~~~l~~~~~f~~l~~~~l~~l~~~l~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~--- 172 (361)
..|..-| .-|.+-..+.....|+++++|++|++..+..|+.++..+.|++|++||++||.++.+|+|.+|.|.|+.
T Consensus 23 ~~L~K~p-~~Rt~edl~~I~~~Lk~~~~f~~l~~~~l~~l~~~m~ye~~~~Ge~IfrqGd~gd~fYIIlsGsV~V~i~~~ 101 (999)
T 4f7z_A 23 ACLDKRP-LERSSEDVDIIFTRLKGVKAFEKFHPNLLRQICLCGYYENLEKGITLFRQGDIGTNWYAVLAGSLDVKVSET 101 (999)
T ss_dssp HHHHSCS-SSCCHHHHHHHHHHHTTCTTTTTCCHHHHHHHHHHCEEEEECTTCEEECTTSCCCEEEEEEESEEEEEECSS
T ss_pred HHhcCCc-ccCCHHHHHHHHHHHhCCHhhhcCCHHHHHHHHhheEEEEECCCCEEEcCCCcCCEEEEEEeeEEEEEEecC
Confidence 3444444 456555566667889999999999999999999999999999999999999999999999999999982
Q ss_pred ----CcEEEEEeCCCCeechhhhhcccCCCceeeEEEecceEEEEEEeHHHHHHHHHHCHHHHH
Q psy9025 173 ----GETVLATLTEGSVFGEISLLALAGTNRRTADVRSHGFSNLFVLNKDDLNEAIEYYPNAQE 232 (361)
Q Consensus 173 ----~~~~~~~l~~Gd~fGe~~ll~~~~~~~~~~~v~A~~~~~~~~l~~~~f~~ll~~~p~~~~ 232 (361)
.+..+..+++|+.||| +++. +.+|+++++|.++|++|+|++++|..++..+|+...
T Consensus 102 ~~~~~~~~v~~l~~G~sFGE-all~---n~pRtaTv~a~~~s~l~~l~r~~F~~i~~~~~e~~~ 161 (999)
T 4f7z_A 102 SSHQDAVTICTLGIGTAFGE-SILD---NTPRHATIVTRESSELLRIEQEDFKALWEKYRQYMA 161 (999)
T ss_dssp SCTTSCEEEEEEETTCEECG-GGGG---TCCCSSEEEESSSEEEEEEEHHHHHHHHHHHHHHHT
T ss_pred CCCCCceeEEEecCCcchhh-hhcc---CCCcceEEEeccceEEEEEEHHHHHHHHHhChHHHH
Confidence 3578899999999999 7887 899999999999999999999999999999887543
No 47
>3la7_A Global nitrogen regulator; activator, DNA-binding, transcription, transcription regulation; HET: BOG; 1.90A {Anabaena} PDB: 3la2_A* 3la3_A* 2xko_A* 2xgx_A* 2xhk_A* 2xkp_A*
Probab=99.64 E-value=4e-15 Score=131.96 Aligned_cols=116 Identities=20% Similarity=0.283 Sum_probs=104.0
Q ss_pred HHHHHHHHHhcc---eEEeCCCCEEEeCCCCCCeEEEEEeeEEEEE-----eCcEEEEEeCCCCeechhhhhcccCCCc-
Q psy9025 129 EALLRELVLKLR---PVLYLPGDYICRKGEVGKEMYIVKTGQVQVV-----SGETVLATLTEGSVFGEISLLALAGTNR- 199 (361)
Q Consensus 129 ~~~l~~l~~~l~---~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~-----~~~~~~~~l~~Gd~fGe~~ll~~~~~~~- 199 (361)
++.++.|+.... .+.|++|++|+.+|++++.+|||.+|.|+++ |++.++..+++|++||+.+++. +.+
T Consensus 30 ~~~l~~L~~~~~~~~~~~~~~ge~i~~~G~~~~~ly~v~~G~v~~~~~~~~G~~~~l~~~~~g~~~G~~~~~~---~~~~ 106 (243)
T 3la7_A 30 ANVFRQMATGAFPPVVETFERNKTIFFPGDPAERVYFLLKGAVKLSRVYEAGEEITVALLRENSVFGVLSLLT---GNKS 106 (243)
T ss_dssp HHHHHHHCCSSCCCEEEEECTTCEEECTTSBCCEEEEEEESCEEEEEECTTCCEEEEEEECTTCEESCHHHHS---SCCS
T ss_pred HHHHHHHhhccchheeEEECCCCEEEcCCCCCceEEEEEeCEEEEEEECCCCCEEEEEEecCCCEEcchHHhC---CCCC
Confidence 677888888888 9999999999999999999999999999998 4568899999999999999997 554
Q ss_pred -eeeEEEecceEEEEEEeHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHh
Q psy9025 200 -RTADVRSHGFSNLFVLNKDDLNEAIEYYPNAQEVLKKKARQLIKENAA 247 (361)
Q Consensus 200 -~~~~v~A~~~~~~~~l~~~~f~~ll~~~p~~~~~~~~~~~~~l~~~~~ 247 (361)
+.++++|.++|+++.|++++|.+++.++|.+...+.+.+.+++.....
T Consensus 107 ~~~~~~~A~~~~~v~~i~~~~~~~l~~~~p~~~~~l~~~l~~~l~~~~~ 155 (243)
T 3la7_A 107 DRFYHAVAFTPVELLSAPIEQVEQALKENPELSMLMLRGLSSRILQTEM 155 (243)
T ss_dssp BCCEEEEESSSEEEEEEEHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred cceEEEEEccceEEEEEcHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
Confidence 568999999999999999999999999999998888888777765543
No 48
>2bgc_A PRFA; bacterial infection, human pathogen, transcriptional regulat transcription; HET: PR3; 2.3A {Listeria monocytogenes} SCOP: a.4.5.4 b.82.3.3 PDB: 2beo_A* 1omi_A
Probab=99.63 E-value=4.8e-15 Score=130.99 Aligned_cols=119 Identities=8% Similarity=0.109 Sum_probs=102.1
Q ss_pred ccCCHHHHHHHHH--hcceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEE-----eCcEEEEEeCCCCeechhhhhcccCC
Q psy9025 125 QDCDEALLRELVL--KLRPVLYLPGDYICRKGEVGKEMYIVKTGQVQVV-----SGETVLATLTEGSVFGEISLLALAGT 197 (361)
Q Consensus 125 ~~l~~~~l~~l~~--~l~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~-----~~~~~~~~l~~Gd~fGe~~ll~~~~~ 197 (361)
++++++++..+.. .++.+.|++|++|+++|++++.+|||.+|.|+++ |++.++..+ +|++||+.+++. +
T Consensus 2 ~~l~~~~l~~ll~~~~~~~~~~~~ge~i~~~G~~~~~~y~I~~G~v~~~~~~~~G~e~~~~~~-~G~~~Ge~~~~~---~ 77 (238)
T 2bgc_A 2 SNAQAEEFKKYLETNGIKPKQFHKKELIFNQWDPQEYCIFLYDGITKLTSISENGTIMNLQYY-KGAFVIMSGFID---T 77 (238)
T ss_dssp --CHHHHHHHHHHHTTCCCEEEETTCEEECTTCCCCEEEEEEESEEEEEEECTTSCEEEEEEE-ESSEEEESBCTT---T
T ss_pred CCCCHHHHHHHHHhCCceEEEECCCCEEEeCCCCCceEEEEEecEEEEEEECCCCCEEEEEEc-CCCEecchhhhc---C
Confidence 4688999999885 5999999999999999999999999999999998 455788888 999999999997 5
Q ss_pred Cce--eeEEEec-ceEEEEEEeHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHh
Q psy9025 198 NRR--TADVRSH-GFSNLFVLNKDDLNEAIEYYPNAQEVLKKKARQLIKENAA 247 (361)
Q Consensus 198 ~~~--~~~v~A~-~~~~~~~l~~~~f~~ll~~~p~~~~~~~~~~~~~l~~~~~ 247 (361)
.++ ..++.|. ++|+++.|++++|..++.++|.+...+.+.+..++.....
T Consensus 78 ~~~~~~~~~~a~~~~~~v~~i~~~~~~~l~~~~p~~~~~~~~~l~~~l~~~~~ 130 (238)
T 2bgc_A 78 ETSVGYYNLEVISEQATAYVIKINELKELLSKNLTHFFYVFQTLQKQVSYSLA 130 (238)
T ss_dssp CCBSCCCEEEECSSEEEEEEEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcCcceeEEEEEcceEEEEEeHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
Confidence 543 5667777 5999999999999999999999998888888777765543
No 49
>3cf6_E RAP guanine nucleotide exchange factor (GEF) 4; EPAC, rapgef4, CAMP, SP-camps, GEF, gunanine nucleotide exchange factor, G-protein, GTP-binding, nucleotide-binding; HET: SP1; 2.20A {Mus musculus}
Probab=99.59 E-value=5.9e-15 Score=149.32 Aligned_cols=132 Identities=24% Similarity=0.340 Sum_probs=117.5
Q ss_pred HHHhhCCHhHHHHHHHHHHHHHhccCcccccCCHHHHHHHHHhcc-eEEeCCCCEEEeCCCCCCeEEEEEeeEEEEEeC-
Q psy9025 96 KILNNLPLKLKTDVAINVHIQTLSKVQLFQDCDEALLRELVLKLR-PVLYLPGDYICRKGEVGKEMYIVKTGQVQVVSG- 173 (361)
Q Consensus 96 ~ll~~lp~~Lr~~i~~~~~~~~l~~~~~f~~l~~~~l~~l~~~l~-~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~~- 173 (361)
.++ ..|+..|.+...+...++++++++|.+++++.+..++..+. .+.|++|++|+++|+.++.+|||.+|.|+++..
T Consensus 13 ~iL-~k~p~~r~~~d~~~l~~~L~~~~lF~~Ls~~~l~~L~~~~~~~~~~~kGe~I~~eGd~~~~lyiIlsG~V~v~~~g 91 (694)
T 3cf6_E 13 MIL-RKPPGQRTVDDLEIIYDELLHIKALSHLSTTVKRELAGVLIFESHAKGGTVLFNQGEEGTSWYIILKGSVNVVIYG 91 (694)
T ss_dssp HHH-HSCGGGCCHHHHHHHHHHHTTCGGGTTSCHHHHHHHHTTCEEEEECSTTCEEECTTSBCCEEEEEEESEEEEEETT
T ss_pred HHH-cCChhhCCHHHHHHHHHHHHcChhhccCCHHHHHHHHHhcceEEEECCCCEEECCCCcCCeEEEEEEEEEEEEEeC
Confidence 344 34555666666667788999999999999999999999998 789999999999999999999999999999843
Q ss_pred cEEEEEeCCCCeechhhhhcccCCCceeeEEEecc-eEEEEEEeHHHHHHHHHHCHHHH
Q psy9025 174 ETVLATLTEGSVFGEISLLALAGTNRRTADVRSHG-FSNLFVLNKDDLNEAIEYYPNAQ 231 (361)
Q Consensus 174 ~~~~~~l~~Gd~fGe~~ll~~~~~~~~~~~v~A~~-~~~~~~l~~~~f~~ll~~~p~~~ 231 (361)
..++..+++|++||+.+++. +.++.++++|.+ +|+++.|++++|.+++.++|.+.
T Consensus 92 ~~il~~l~~Gd~fGe~al~~---~~~~~~tv~A~edd~~ll~I~~~~f~~ll~~~p~l~ 147 (694)
T 3cf6_E 92 KGVVCTLHEGDDFGKLALVN---DAPRAASIVLREDNCHFLRVDKEDFNRILRDVEANT 147 (694)
T ss_dssp TEEEEEEETTCEECHHHHHH---TCBCSSEEEECSSSEEEEEEEHHHHHHHTTTTCCCC
T ss_pred CEEEEEeCCCCEeehHHHhC---CCCceEEEEEeeCceEEEEEeHHHHHHHHHHCHHHH
Confidence 36899999999999999998 889999999999 59999999999999999999873
No 50
>4f7z_A RAP guanine nucleotide exchange factor 4; cyclic nucleotide, regulation, auto-IN CDC25 homology domain, exocytosis; 2.60A {Mus musculus} PDB: 2byv_E
Probab=99.57 E-value=1.3e-14 Score=153.46 Aligned_cols=114 Identities=25% Similarity=0.373 Sum_probs=104.3
Q ss_pred HHHHHHHhccCcccccCCHHHHHHHHHhcceEE-eCCCCEEEeCCCCCCeEEEEEeeEEEEEe-CcEEEEEeCCCCeech
Q psy9025 111 INVHIQTLSKVQLFQDCDEALLRELVLKLRPVL-YLPGDYICRKGEVGKEMYIVKTGQVQVVS-GETVLATLTEGSVFGE 188 (361)
Q Consensus 111 ~~~~~~~l~~~~~f~~l~~~~l~~l~~~l~~~~-~~~ge~I~~~G~~~~~ly~I~~G~v~v~~-~~~~~~~l~~Gd~fGe 188 (361)
.+...+++.++|.|.+|+...++.|+..+.... +.+|++|++|||.++.+|||.+|.|.|+. ++..+..+++||+|||
T Consensus 332 ~e~l~e~L~~i~~f~~Ls~~v~r~L~~~l~~~~~~kaGtvI~rQGE~gds~YIIlsG~V~V~~~~~~~v~~L~~Gd~FGE 411 (999)
T 4f7z_A 332 LEIIYDELLHIKALSHLSTTVKRELAGVLIFESHAKGGTVLFNQGEEGTSWYIILKGSVNVVIYGKGVVCTLHEGDDFGK 411 (999)
T ss_dssp HHHHHHHHTTCGGGTTSCHHHHHHHTTTCEEEEESSTTCEEECTTSBCCEEEEEEESEEEEEETTTEEEEEEETTCEECG
T ss_pred HHHHHHHHHhhHHHhcCCHHHHHHHHHhhhhheeccCCCEEEeCCCcCCeEEEEEeeEEEEEEcCCcceEEecCCCcccc
Confidence 456678999999999999999999999998655 57899999999999999999999999984 5578899999999999
Q ss_pred hhhhcccCCCceeeEEEecce-EEEEEEeHHHHHHHHHHC
Q psy9025 189 ISLLALAGTNRRTADVRSHGF-SNLFVLNKDDLNEAIEYY 227 (361)
Q Consensus 189 ~~ll~~~~~~~~~~~v~A~~~-~~~~~l~~~~f~~ll~~~ 227 (361)
.++++ +.||.++++|.++ |++++|++++|.+++++-
T Consensus 412 lALL~---~~PR~aTV~a~~d~c~fl~i~k~df~~il~~~ 448 (999)
T 4f7z_A 412 LALVN---DAPRAASIVLREDNCHFLRVDKEDGNRILRDV 448 (999)
T ss_dssp GGGTC---SCBCSSEEEESSSSEEEEEEEHHHHHHHHHHH
T ss_pred hhhcc---CCCeeEEEEEecCceEEEEeeHHHHHHHHhHH
Confidence 99999 9999999999985 999999999999999863
No 51
>3b02_A Transcriptional regulator, CRP family; structural genomics, riken structural genomics/proteomics in RSGI; 1.92A {Thermus thermophilus} PDB: 2zdb_A
Probab=99.52 E-value=6.4e-14 Score=119.80 Aligned_cols=97 Identities=18% Similarity=0.231 Sum_probs=87.3
Q ss_pred EEeCCCCEEEeCCCCCCeEEEEEeeEEEEE-----eCcEEEEEeCCCCeechhhhhcccCCCceeeEEEecceEEEEEEe
Q psy9025 142 VLYLPGDYICRKGEVGKEMYIVKTGQVQVV-----SGETVLATLTEGSVFGEISLLALAGTNRRTADVRSHGFSNLFVLN 216 (361)
Q Consensus 142 ~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~-----~~~~~~~~l~~Gd~fGe~~ll~~~~~~~~~~~v~A~~~~~~~~l~ 216 (361)
+.|++|++|+++|++++.+|||.+|.|+++ |++.++..+++|++||+ +++. +.++.++++|.++|+++.||
T Consensus 2 ~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~Ge-~~~~---~~~~~~~~~A~~~~~v~~i~ 77 (195)
T 3b02_A 2 KRFARKETIYLRGEEARTLYRLEEGLVRVVELLPDGRLITLRHVLPGDYFGE-EALE---GKAYRYTAEAMTEAVVQGLE 77 (195)
T ss_dssp EEECTTCEEECTTSBCCCEEEEEESCEEEEEECTTSCEEEEEEECTTCEECG-GGGT---CSBCSSEEEESSSEEEEEEC
T ss_pred eEcCCCCEEECCCCCCCeEEEEEeCEEEEEEECCCCCEEEEEEecCCCEech-hhhC---CCCceeEEEECCcEEEEEEc
Confidence 679999999999999999999999999997 35588999999999999 9998 78999999999999999999
Q ss_pred HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHhh
Q psy9025 217 KDDLNEAIEYYPNAQEVLKKKARQLIKENAAR 248 (361)
Q Consensus 217 ~~~f~~ll~~~p~~~~~~~~~~~~~l~~~~~~ 248 (361)
+++|. |.+...+...+..++.....+
T Consensus 78 ~~~~~------p~~~~~~~~~l~~~l~~~~~~ 103 (195)
T 3b02_A 78 PRAMD------HEALHRVARNLARQMRRVQAY 103 (195)
T ss_dssp GGGCC------HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHcC------HHHHHHHHHHHHHHHHHHHHH
Confidence 99998 999888888877777665544
No 52
>2zcw_A TTHA1359, transcriptional regulator, FNR/CRP family; stationary phase, DNA-binding, transcription regulation; 1.50A {Thermus thermophilus}
Probab=99.42 E-value=4.6e-13 Score=115.02 Aligned_cols=101 Identities=23% Similarity=0.249 Sum_probs=85.3
Q ss_pred HHHhcceEEeCCCCEEEeCCCCC--CeEEEEEeeEEEEE-----eCcEEEEEeCCCCeechhhhhcccCCCceeeEEEec
Q psy9025 135 LVLKLRPVLYLPGDYICRKGEVG--KEMYIVKTGQVQVV-----SGETVLATLTEGSVFGEISLLALAGTNRRTADVRSH 207 (361)
Q Consensus 135 l~~~l~~~~~~~ge~I~~~G~~~--~~ly~I~~G~v~v~-----~~~~~~~~l~~Gd~fGe~~ll~~~~~~~~~~~v~A~ 207 (361)
|...++.+.|++|++|+++|+++ +.+|||.+|.|+++ |++.++..+++|++||+ +++. +.++.++++|.
T Consensus 1 l~~~~~~~~~~~g~~i~~~g~~~~~~~~y~v~~G~v~~~~~~~~G~~~~~~~~~~g~~~G~-~~l~---~~~~~~~~~A~ 76 (202)
T 2zcw_A 1 MTQVRETVSFKAGDVILYPGVPGPRDRAYRVLEGLVRLEAVDEEGNALTLRLVRPGGFFGE-EALF---GQERIYFAEAA 76 (202)
T ss_dssp -----CCEEECTTCEEECSBSCCTTCCCEEEEESCEEEEEECTTSCEEEEEEECTTCEECT-HHHH---TCCBCSEEEES
T ss_pred CCccceEEEECCCCEEECCCCCCCCCeEEEEEeCEEEEEEECCCCcEEEEEEecCCCEeee-hhcC---CCCcceEEEEc
Confidence 34678899999999999999999 99999999999997 45688999999999999 8887 78899999999
Q ss_pred ceEEEEEEeHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
Q psy9025 208 GFSNLFVLNKDDLNEAIEYYPNAQEVLKKKARQLIKENA 246 (361)
Q Consensus 208 ~~~~~~~l~~~~f~~ll~~~p~~~~~~~~~~~~~l~~~~ 246 (361)
++|+++.| +++|. |.+...+...+..++....
T Consensus 77 ~~~~v~~i-~~~~~------p~~~~~~~~~l~~~l~~~~ 108 (202)
T 2zcw_A 77 TDVRLEPL-PENPD------PELLKDLAQHLSQGLAEAY 108 (202)
T ss_dssp SCEEEEEC-CSSCC------HHHHHHHHHHHHHHHHHHH
T ss_pred ccEEEEEE-hHhcC------HHHHHHHHHHHHHHHHHHH
Confidence 99999999 98886 8888777777766665544
No 53
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=96.72 E-value=3e-05 Score=70.62 Aligned_cols=79 Identities=8% Similarity=0.092 Sum_probs=60.4
Q ss_pred CcchhHH-HhhcccCcccchhhhccCcccccCcccc----cccccccccccCchhhhh-------hh-ccCCCCCCCC--
Q psy9025 277 PKLLPIV-MQVVPQNSMASKLLRCGSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LL-HQTPTGHNNS-- 341 (361)
Q Consensus 277 ~~~l~~~-~~~i~~~~~~~~vl~~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~-~~~~~~~~~~-- 341 (361)
..++|.+ ++.+.+......+ ..|.+++..+++| ++..+.+..++|+.||.| .+ +... ++|.
T Consensus 59 ~~AiK~i~k~~~~~~~~~~~~--~~E~~il~~l~HpnIv~l~~~~~~~~~~yivmEy~~gG~L~~~i~~~~~--l~e~~~ 134 (311)
T 4aw0_A 59 EYAIKILEKRHIIKENKVPYV--TRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS--FDETCT 134 (311)
T ss_dssp EEEEEEEEHHHHHHTTCHHHH--HHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHHSS--CCHHHH
T ss_pred EEEEEEEEHHHCCCHHHHHHH--HHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCCCHHHHHHHcCC--CCHHHH
Confidence 4455655 5555555555666 7899999999988 567999999999999988 23 3233 7776
Q ss_pred --ccceeehhhhhhhhcccc
Q psy9025 342 --FECQVTVHREDIHESHIT 359 (361)
Q Consensus 342 --~~a~v~~a~~~lH~~~i~ 359 (361)
+.++++.|++|||++||+
T Consensus 135 ~~~~~qi~~al~ylH~~~Ii 154 (311)
T 4aw0_A 135 RFYTAEIVSALEYLHGKGII 154 (311)
T ss_dssp HHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHHHHHHHHHCCCc
Confidence 389999999999999997
No 54
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=95.46 E-value=0.00027 Score=63.18 Aligned_cols=77 Identities=12% Similarity=0.081 Sum_probs=52.7
Q ss_pred chhHH-HhhcccCcccchhhhccCcccccCcccc----cccccccccccCchhhhh-------hhccCCCCCCCCc----
Q psy9025 279 LLPIV-MQVVPQNSMASKLLRCGSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQTPTGHNNSF---- 342 (361)
Q Consensus 279 ~l~~~-~~~i~~~~~~~~vl~~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~~~~~~~~~~---- 342 (361)
++|.+ +..+.+......+ ..|-.+++.+++| ++..+.+...+|+.||.| +..+.+ ++|.-
T Consensus 42 AiK~i~~~~~~~~~~~~~~--~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~~g~L~~~l~~~~~--l~e~~~~~~ 117 (275)
T 3hyh_A 42 ALKIINKKVLAKSDMQGRI--EREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDK--MSEQEARRF 117 (275)
T ss_dssp EEEEEECC------CHHHH--HHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCEEHHHHHHHSCS--CCHHHHHHH
T ss_pred EEEEEeHHHcCCHHHHHHH--HHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEeCCCCCHHHHHHHcCC--CCHHHHHHH
Confidence 44444 3333334444455 6788888888888 556888889999999988 334334 77763
Q ss_pred cceeehhhhhhhhcccc
Q psy9025 343 ECQVTVHREDIHESHIT 359 (361)
Q Consensus 343 ~a~v~~a~~~lH~~~i~ 359 (361)
.++++.|++|||++||+
T Consensus 118 ~~qi~~al~ylH~~~Ii 134 (275)
T 3hyh_A 118 FQQIISAVEYCHRHKIV 134 (275)
T ss_dssp HHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHCCcc
Confidence 89999999999999997
No 55
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=95.34 E-value=0.00058 Score=61.93 Aligned_cols=59 Identities=5% Similarity=0.032 Sum_probs=45.0
Q ss_pred ccCcccccCcccc----cccccccccccCchhhhh-------hh-ccCCCCCCCC----ccceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LL-HQTPTGHNNS----FECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~-~~~~~~~~~~----~~a~v~~a~~~lH~~~i~ 359 (361)
..|..+|..+++| ++..+.+...+|+.||.| .+ +..+ ++|. +.++++.|++|||++||+
T Consensus 74 ~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~~~~--l~e~~~~~~~~qi~~aL~ylH~~~Ii 148 (304)
T 3ubd_A 74 KMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVM--FTEEDVKFYLAELALALDHLHSLGII 148 (304)
T ss_dssp ----CCCCCCCCTTEECEEEEEEETTEEEEEECCCTTCEEHHHHHHHCC--CCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEEcCCCCCHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCCc
Confidence 6789999999988 566888999999999988 22 3233 6666 388999999999999997
No 56
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=94.69 E-value=0.0014 Score=60.53 Aligned_cols=59 Identities=8% Similarity=-0.017 Sum_probs=49.0
Q ss_pred ccCcccccCcccc----cccccccccccCchhhhh-------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
..|..+|+.++++ ++..+.+...+|+.||.| ++.+.. ++|.- ..+++.|++|||++|||
T Consensus 119 ~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~~~--l~e~~~~~~~~qi~~aL~ylH~~~Ii 192 (346)
T 4fih_A 119 FNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLHAQGVI 192 (346)
T ss_dssp HHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCCTTEEHHHHHHHSC--CCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCCCcHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 6788999999888 566888999999999988 445444 77763 88999999999999997
No 57
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=94.67 E-value=0.00088 Score=67.09 Aligned_cols=96 Identities=4% Similarity=-0.019 Sum_probs=64.8
Q ss_pred cccccccccCCCCCCC-----------CCcchhHH-HhhcccCcccchhhhccCccc---ccCcccc----ccccccccc
Q psy9025 260 DASSVLLDRKGEEPKQ-----------APKLLPIV-MQVVPQNSMASKLLRCGSKSL---NKRPHRR----VNRSASADT 320 (361)
Q Consensus 260 ~~~l~~~~~~~~~~~~-----------~~~~l~~~-~~~i~~~~~~~~vl~~~ek~i---~~~~~~~----~~~t~~d~~ 320 (361)
+.|+.+...+|.+..+ ...++|.+ +..+.......++ ..|+.+ +..+++| ++..|.+..
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~--~~E~~~l~ll~~~~HP~IV~l~~~f~~~~ 265 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLA--LNERIMLSLVSTGDCPFIVCMSYAFHTPD 265 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHH--HHHHHHHHHHSSSCCTTBCCEEEEEECSS
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHH--HHHHHHHHHHhhCCCCCEeEEEEEEEECC
Confidence 3455555566654433 34456666 5555555555555 556544 4456677 566999999
Q ss_pred ccCchhhhh--------hhccCCCCCCCC----ccceeehhhhhhhhcccc
Q psy9025 321 YFHPKQQRR--------LLHQTPTGHNNS----FECQVTVHREDIHESHIT 359 (361)
Q Consensus 321 ~~~~l~~~~--------~~~~~~~~~~~~----~~a~v~~a~~~lH~~~i~ 359 (361)
++|+.|+.| +-+... ++|. ++++++.|++|||++|||
T Consensus 266 ~lylVmEy~~GGdL~~~l~~~~~--l~E~~a~~y~~qIl~aL~yLH~~gIi 314 (689)
T 3v5w_A 266 KLSFILDLMNGGDLHYHLSQHGV--FSEADMRFYAAEIILGLEHMHNRFVV 314 (689)
T ss_dssp EEEEEECCCCSCBHHHHHHHHCC--CCHHHHHHHHHHHHHHHHHHHTTTEE
T ss_pred EEEEEEecCCCCcHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 999999988 223233 7776 399999999999999997
No 58
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=94.20 E-value=0.002 Score=60.99 Aligned_cols=59 Identities=8% Similarity=-0.017 Sum_probs=48.8
Q ss_pred ccCcccccCcccc----cccccccccccCchhhhh-------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
..|-.+|+.++++ ++..|.+...+|+.||.| ++.... ++|.- ..+++.|++|||++|||
T Consensus 196 ~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~~gG~L~~~i~~~~--l~e~~~~~~~~qil~aL~ylH~~~Ii 269 (423)
T 4fie_A 196 FNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLHAQGVI 269 (423)
T ss_dssp HHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHHHSC--CCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCCCCCcHHHHHhccC--CCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 6788999999888 566888999999999988 344344 77763 88999999999999997
No 59
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=93.68 E-value=0.0039 Score=57.23 Aligned_cols=59 Identities=8% Similarity=-0.072 Sum_probs=46.7
Q ss_pred ccCcccccCcccc----cccccccccccCchhhhh-------hh-ccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LL-HQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~-~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
..|..++..+++| ++..+.+..++|+.||.| ++ +..+ ++|.- .+.++.|++|||++|||
T Consensus 98 ~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~~~~--l~e~~~~~~~~qi~~aL~ylH~~~Ii 172 (336)
T 4g3f_A 98 VEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGC--LPEDRALYYLGQALEGLEYLHTRRIL 172 (336)
T ss_dssp THHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHHHSS--CCHHHHHHHHHHHHHHHHHHHTTTEE
T ss_pred HHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCCCcHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCce
Confidence 4577888888888 566888899999999988 23 3233 66663 88999999999999997
No 60
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=93.30 E-value=0.0018 Score=61.29 Aligned_cols=78 Identities=9% Similarity=0.084 Sum_probs=55.8
Q ss_pred cchhHH-HhhcccCcccchhhhccCcccccCcccc----cccccccccccCchhhhh-------hhccCCCCCCCCc---
Q psy9025 278 KLLPIV-MQVVPQNSMASKLLRCGSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQTPTGHNNSF--- 342 (361)
Q Consensus 278 ~~l~~~-~~~i~~~~~~~~vl~~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~~~~~~~~~~--- 342 (361)
.++|.+ +..+.......++ ..|..++..++++ +...+.+..++|+.++.| ++++.. ++|..
T Consensus 97 ~AiK~~~k~~~~~~~~~~~~--~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~--~~e~~~~~ 172 (410)
T 3v8s_A 97 YAMKLLSKFEMIKRSDSAFF--WEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD--VPEKWARF 172 (410)
T ss_dssp EEEEEEEHHHHHHTCCCSTH--HHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHCC--CCHHHHHH
T ss_pred EEEEEEehhhhhhhHHHHHH--HHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcHHHHHHcCC--CCHHHHHH
Confidence 344544 3344444445555 6788888888887 455888999999998877 344333 66653
Q ss_pred -cceeehhhhhhhhcccc
Q psy9025 343 -ECQVTVHREDIHESHIT 359 (361)
Q Consensus 343 -~a~v~~a~~~lH~~~i~ 359 (361)
+++++.|++|||++||+
T Consensus 173 ~~~qi~~aL~~LH~~giv 190 (410)
T 3v8s_A 173 YTAEVVLALDAIHSMGFI 190 (410)
T ss_dssp HHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHHHHHHHCCeE
Confidence 89999999999999987
No 61
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=92.84 E-value=0.0017 Score=60.02 Aligned_cols=61 Identities=7% Similarity=0.008 Sum_probs=46.9
Q ss_pred ccCcccccCcccc----cccccccccccCchhhhh-------hhccCCC-CCCCC----ccceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQTPT-GHNNS----FECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~~~~-~~~~~----~~a~v~~a~~~lH~~~i~ 359 (361)
..|-.+|..++++ ++..+.+...+|+.||.| ++..... .++|. +.++++.|++|||++|||
T Consensus 71 ~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~Ii 147 (350)
T 4b9d_A 71 RREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKIL 147 (350)
T ss_dssp HHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 5788888888888 566888999999999988 2321111 15554 388999999999999997
No 62
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=91.40 E-value=0.013 Score=54.45 Aligned_cols=77 Identities=6% Similarity=0.072 Sum_probs=43.5
Q ss_pred chhHH-HhhcccCcccchhhhccCcccc-cCcccc----cccccccccccCchhhhh-------hh-ccCCCCCCCC---
Q psy9025 279 LLPIV-MQVVPQNSMASKLLRCGSKSLN-KRPHRR----VNRSASADTYFHPKQQRR-------LL-HQTPTGHNNS--- 341 (361)
Q Consensus 279 ~l~~~-~~~i~~~~~~~~vl~~~ek~i~-~~~~~~----~~~t~~d~~~~~~l~~~~-------~~-~~~~~~~~~~--- 341 (361)
++|.+ +..+.......++ ..|+.++ +.+.++ +...+.+...+|+.++.| .+ +... +++.
T Consensus 67 AiK~~~~~~~~~~~~~~~~--~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~--~~~~~~~ 142 (373)
T 2r5t_A 67 AVKVLQKKAILKKKEEKHI--MSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERC--FLEPRAR 142 (373)
T ss_dssp EEEEEEGGGBC---------------CCBCCCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSS--CCHHHHH
T ss_pred EEEEEEHHHhhhhHHHHHH--HHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEEEeCCCCCcHHHHHHhcCC--CCHHHHH
Confidence 44444 3344444444455 5666664 447777 445888888888888877 12 2222 5554
Q ss_pred -ccceeehhhhhhhhcccc
Q psy9025 342 -FECQVTVHREDIHESHIT 359 (361)
Q Consensus 342 -~~a~v~~a~~~lH~~~i~ 359 (361)
++++++.|++|||++||+
T Consensus 143 ~~~~qi~~aL~~LH~~giv 161 (373)
T 2r5t_A 143 FYAAEIASALGYLHSLNIV 161 (373)
T ss_dssp HHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHCCce
Confidence 389999999999999997
No 63
>4h33_A LMO2059 protein; bilayers, KVLM, lipidic cubic phase (LCP), pore module, ION membrane protein; HET: OLC; 3.10A {Listeria monocytogenes} PDB: 4h37_A
Probab=91.31 E-value=0.0064 Score=48.07 Aligned_cols=38 Identities=11% Similarity=-0.056 Sum_probs=29.8
Q ss_pred eecCCCCcccc---cceeecceeeeehhhHHHHHhhhhhhc
Q psy9025 3 IYPRNNETEAN---TWLRKESVPEQVRGDIESGVDEDEEYH 40 (361)
Q Consensus 3 ~~~~~~~~~~~---~~l~g~~vfayiiG~i~s~~~~~~~~~ 40 (361)
++|.+...+.. .|++|+++|++++|.+++.+.+.....
T Consensus 63 i~P~t~~gr~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~ 103 (137)
T 4h33_A 63 IVPVTPIGRILASIMMLFGIAFIGMITSTITNFFRCKKPTN 103 (137)
T ss_dssp SCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTTTTC-
T ss_pred CCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 57888877754 488999999999999999887654433
No 64
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=90.91 E-value=0.0071 Score=56.88 Aligned_cols=59 Identities=7% Similarity=-0.040 Sum_probs=43.4
Q ss_pred ccCcccccCcccc----ccc------ccccccccCchhhhh-------hhccCCCCCCCCc----cceeehhhhhhhhcc
Q psy9025 299 CGSKSLNKRPHRR----VNR------SASADTYFHPKQQRR-------LLHQTPTGHNNSF----ECQVTVHREDIHESH 357 (361)
Q Consensus 299 ~~ek~i~~~~~~~----~~~------t~~d~~~~~~l~~~~-------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~ 357 (361)
..|-.+|+.++++ ++. .+.+...+|+.||.| +..+.+ ++|.. ..+++.|++|||++|
T Consensus 101 ~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~~ivmE~~~g~L~~~i~~~~~--l~~~~~~~~~~qil~al~ylH~~~ 178 (398)
T 4b99_A 101 LRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQP--LTLEHVRYFLYQLLRGLKYMHSAQ 178 (398)
T ss_dssp HHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCEEEEEECCSEEHHHHHTSSSC--CCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhcCCCCcceEeeeeecccccccCCEEEEEEeCCCCCHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCc
Confidence 4688888888887 222 355667889999888 223233 66663 899999999999999
Q ss_pred cc
Q psy9025 358 IT 359 (361)
Q Consensus 358 i~ 359 (361)
||
T Consensus 179 ii 180 (398)
T 4b99_A 179 VI 180 (398)
T ss_dssp CB
T ss_pred Cc
Confidence 97
No 65
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=90.49 E-value=0.0041 Score=58.84 Aligned_cols=80 Identities=10% Similarity=0.096 Sum_probs=52.6
Q ss_pred cchhHH-HhhcccCcccchhhhccCcccccCcccc----cccccccccccCchhhhh-------hhccCCCCCCCC----
Q psy9025 278 KLLPIV-MQVVPQNSMASKLLRCGSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQTPTGHNNS---- 341 (361)
Q Consensus 278 ~~l~~~-~~~i~~~~~~~~vl~~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~~~~~~~~~---- 341 (361)
.++|.+ +..+.......++ ..|++++..++++ +...+.+..++|+.++.| ++.+....+++.
T Consensus 89 vAiK~l~k~~~~~~~~~~~~--~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~ 166 (412)
T 2vd5_A 89 YAMKIMNKWDMLKRGEVSCF--REERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARF 166 (412)
T ss_dssp EEEEEEEHHHHHHHGGGCCH--HHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHH
T ss_pred EEEEEEeHHHhhhHHHHHHH--HHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHH
Confidence 344444 3333333334445 6678888777776 455888889999998876 233211125555
Q ss_pred ccceeehhhhhhhhcccc
Q psy9025 342 FECQVTVHREDIHESHIT 359 (361)
Q Consensus 342 ~~a~v~~a~~~lH~~~i~ 359 (361)
++++++.|++|||++||+
T Consensus 167 ~~~qi~~aL~~LH~~gii 184 (412)
T 2vd5_A 167 YLAEIVMAIDSVHRLGYV 184 (412)
T ss_dssp HHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHHHHHHHCCee
Confidence 289999999999999997
No 66
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=90.40 E-value=0.0068 Score=55.58 Aligned_cols=79 Identities=6% Similarity=0.088 Sum_probs=52.0
Q ss_pred CcchhHH-HhhcccCcccchhhhccCcccccCcccc----cccccccccccCchhhhh--------hhccCCCCCCCC--
Q psy9025 277 PKLLPIV-MQVVPQNSMASKLLRCGSKSLNKRPHRR----VNRSASADTYFHPKQQRR--------LLHQTPTGHNNS-- 341 (361)
Q Consensus 277 ~~~l~~~-~~~i~~~~~~~~vl~~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~--------~~~~~~~~~~~~-- 341 (361)
..++|.+ +..+.......++ ..|..++..++++ +...+.+...+|+.++.| +.+... +++.
T Consensus 32 ~vaiK~~~~~~~~~~~~~~~~--~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~--~~~~~~ 107 (337)
T 1o6l_A 32 YYAMKILRKEVIIAKDEVAHT--VTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERV--FTEERA 107 (337)
T ss_dssp EEEEEEEEHHHHHHTTCHHHH--HHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSC--CCHHHH
T ss_pred EEEEEEEeHHHhhhhhHHHHH--HHHHHHHHhCCCCcCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHhcCC--CCHHHH
Confidence 3445544 3333333344455 5678888887777 445788888888888776 122223 5555
Q ss_pred --ccceeehhhhhhhhcccc
Q psy9025 342 --FECQVTVHREDIHESHIT 359 (361)
Q Consensus 342 --~~a~v~~a~~~lH~~~i~ 359 (361)
++++++.|++|||++||+
T Consensus 108 ~~~~~qi~~aL~~LH~~~iv 127 (337)
T 1o6l_A 108 RFYGAEIVSALEYLHSRDVV 127 (337)
T ss_dssp HHHHHHHHHHHHHHHHTTCB
T ss_pred HHHHHHHHHHHHHHHHCCee
Confidence 289999999999999997
No 67
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=90.15 E-value=0.0071 Score=54.91 Aligned_cols=80 Identities=10% Similarity=0.064 Sum_probs=52.0
Q ss_pred CcchhHH-HhhcccCcccchhhhccCcccccCcccc----cccccccccccCchhhhh-------hhccCCCCCCCCc--
Q psy9025 277 PKLLPIV-MQVVPQNSMASKLLRCGSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQTPTGHNNSF-- 342 (361)
Q Consensus 277 ~~~l~~~-~~~i~~~~~~~~vl~~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~~~~~~~~~~-- 342 (361)
..++|.+ +..+.......++ ..|..++..+.++ +...+.+...+|+.++.| ++++. ..+++..
T Consensus 33 ~~aiK~~~~~~~~~~~~~~~~--~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~ 109 (318)
T 1fot_A 33 YYAMKVLKKEIVVRLKQVEHT--NDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKS-QRFPNPVAK 109 (318)
T ss_dssp EEEEEEEEHHHHHHTTCHHHH--HHHHHHHHSCCBTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHT-SSCCHHHHH
T ss_pred EEEEEEEEHHHhhhhhHHHHH--HHHHHHHhhCCCCCCceEeEEEEeCCEEEEEEeCCCCCCHHHHHHHc-CCCCHHHHH
Confidence 3344444 3333333344445 5677888887777 455788888888888876 23311 1155542
Q ss_pred --cceeehhhhhhhhcccc
Q psy9025 343 --ECQVTVHREDIHESHIT 359 (361)
Q Consensus 343 --~a~v~~a~~~lH~~~i~ 359 (361)
+++++.|++|||++||+
T Consensus 110 ~~~~qi~~aL~~LH~~~iv 128 (318)
T 1fot_A 110 FYAAEVCLALEYLHSKDII 128 (318)
T ss_dssp HHHHHHHHHHHHHHTTTEE
T ss_pred HHHHHHHHHHHHHHHCCcc
Confidence 89999999999999986
No 68
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=90.10 E-value=0.0074 Score=55.61 Aligned_cols=77 Identities=12% Similarity=0.055 Sum_probs=51.7
Q ss_pred chhHH-HhhcccCcccchhhhccCcccccCcccc----cccccccccccCchhhhh-------hhc-cCCCCCCCCc---
Q psy9025 279 LLPIV-MQVVPQNSMASKLLRCGSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLH-QTPTGHNNSF--- 342 (361)
Q Consensus 279 ~l~~~-~~~i~~~~~~~~vl~~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~-~~~~~~~~~~--- 342 (361)
++|.+ +..+.......++ ..|..++..+.++ +...+.+...+|+.++.| .+. ... +++..
T Consensus 70 aiK~~~~~~~~~~~~~~~~--~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~--~~~~~~~~ 145 (350)
T 1rdq_E 70 AMKILDKQKVVKLKQIEHT--LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FSEPHARF 145 (350)
T ss_dssp EEEEEEHHHHHHTTCHHHH--HHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHCC--CCHHHHHH
T ss_pred EEEEEEhHHhccHHHHHHH--HHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEcCCCCCcHHHHHHHcCC--CCHHHHHH
Confidence 44444 3333333444455 5688888888777 445788888888888876 222 223 55552
Q ss_pred -cceeehhhhhhhhcccc
Q psy9025 343 -ECQVTVHREDIHESHIT 359 (361)
Q Consensus 343 -~a~v~~a~~~lH~~~i~ 359 (361)
+++++.|++|||++||+
T Consensus 146 ~~~qi~~aL~~LH~~~iv 163 (350)
T 1rdq_E 146 YAAQIVLTFEYLHSLDLI 163 (350)
T ss_dssp HHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHHHHHHHCCcc
Confidence 89999999999999986
No 69
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=88.60 E-value=0.019 Score=56.70 Aligned_cols=61 Identities=8% Similarity=-0.037 Sum_probs=46.7
Q ss_pred ccCcccccCcccc----cccccccccccCchhhhh-------hhccCCCCCCCC----ccceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQTPTGHNNS----FECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~~~~~~~~~----~~a~v~~a~~~lH~~~i~ 359 (361)
..|..+|..++++ ++..|.+...+|+.|+.| .+.+....++|. +.++++.|++|||++||+
T Consensus 202 ~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~ii 277 (573)
T 3uto_A 202 RKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYV 277 (573)
T ss_dssp HHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 5678888888888 566889999999999988 232111125555 288999999999999997
No 70
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=88.53 E-value=0.012 Score=58.07 Aligned_cols=81 Identities=9% Similarity=0.057 Sum_probs=54.3
Q ss_pred CcchhHH-HhhcccCcccchhhhccCcccccCcccc----cccccccccccCchhhhh-------hhc-cCCCCCCCCc-
Q psy9025 277 PKLLPIV-MQVVPQNSMASKLLRCGSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLH-QTPTGHNNSF- 342 (361)
Q Consensus 277 ~~~l~~~-~~~i~~~~~~~~vl~~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~-~~~~~~~~~~- 342 (361)
..++|.+ +..+.......++ ..|..++..++++ +...+.+...+|+.++.| .+. ....++++..
T Consensus 211 ~vAvK~l~k~~~~~~~~~~~~--~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmEy~~gg~L~~~l~~~~~~~l~e~~~ 288 (576)
T 2acx_A 211 MYACKKLEKKRIKKRKGEAMA--LNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARA 288 (576)
T ss_dssp EEEEEEEEHHHHHHTTCHHHH--HHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHSSSSCCCCHHHH
T ss_pred EEEEEEEEhHhhhhhHHHHHH--HHHHHHHHHcCCCCEeeEEEEEeeCCEEEEEEEcCCCCcHHHHHHhcCCCCCCHHHH
Confidence 4455555 4444444444555 6788888888877 444788888888888876 222 1222355552
Q ss_pred ---cceeehhhhhhhhcccc
Q psy9025 343 ---ECQVTVHREDIHESHIT 359 (361)
Q Consensus 343 ---~a~v~~a~~~lH~~~i~ 359 (361)
+++++.|++|||++||+
T Consensus 289 ~~i~~qIl~aL~yLH~~gIv 308 (576)
T 2acx_A 289 VFYAAEICCGLEDLHRERIV 308 (576)
T ss_dssp HHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHHHHHHHHHCCEe
Confidence 89999999999999987
No 71
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=88.19 E-value=0.013 Score=55.09 Aligned_cols=77 Identities=9% Similarity=0.148 Sum_probs=48.6
Q ss_pred chhHH-HhhcccCcccchhhhccCcccccCc-ccc----cccccccccccCchhhhh--------hhccCCCCCCCC---
Q psy9025 279 LLPIV-MQVVPQNSMASKLLRCGSKSLNKRP-HRR----VNRSASADTYFHPKQQRR--------LLHQTPTGHNNS--- 341 (361)
Q Consensus 279 ~l~~~-~~~i~~~~~~~~vl~~~ek~i~~~~-~~~----~~~t~~d~~~~~~l~~~~--------~~~~~~~~~~~~--- 341 (361)
++|.+ +..+.+......+ ..|+.++..+ +++ +...+.+...+|+.++.| +.+... +++.
T Consensus 81 AvK~~~k~~~~~~~~~~~~--~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~--l~~~~~~ 156 (396)
T 4dc2_A 81 AMRVVKKELVNDDEDIDWV--QTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRK--LPEEHAR 156 (396)
T ss_dssp EEEEEEGGGTC----CCHH--HHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSS--CCHHHHH
T ss_pred EEEEEEhhhccCHHHHHHH--HHHHHHHHhcCCCCCcCeeEEEEEECCEEEEEEEcCCCCcHHHHHHHcCC--CCHHHHH
Confidence 44444 3333333334444 5677777663 565 455788888888888877 122223 5555
Q ss_pred -ccceeehhhhhhhhcccc
Q psy9025 342 -FECQVTVHREDIHESHIT 359 (361)
Q Consensus 342 -~~a~v~~a~~~lH~~~i~ 359 (361)
++++++.|++|||++||+
T Consensus 157 ~~~~qi~~aL~~LH~~giv 175 (396)
T 4dc2_A 157 FYSAEISLALNYLHERGII 175 (396)
T ss_dssp HHHHHHHHHHHHHHHTTCB
T ss_pred HHHHHHHHHHHHHHHCCEE
Confidence 289999999999999997
No 72
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=88.17 E-value=0.011 Score=56.18 Aligned_cols=68 Identities=7% Similarity=0.111 Sum_probs=48.3
Q ss_pred CcccchhhhccCcccccCcccc----cccccccccccCchhhhh-------hhccCCCCCCCC----ccceeehhhhhhh
Q psy9025 290 NSMASKLLRCGSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQTPTGHNNS----FECQVTVHREDIH 354 (361)
Q Consensus 290 ~~~~~~vl~~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~~~~~~~~~----~~a~v~~a~~~lH 354 (361)
.....++ ..|+.++..++++ +...+.+...+|+.++.| ++.+....++|. ++++++.|++|||
T Consensus 115 ~~~~~~~--~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH 192 (437)
T 4aw2_A 115 RAETACF--REERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVH 192 (437)
T ss_dssp TTTTCCH--HHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHH--HHHHHHHHhCCCCCEEEEEEEEeeCCEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 3334444 6678888777777 445788888888888876 344212226665 3899999999999
Q ss_pred hcccc
Q psy9025 355 ESHIT 359 (361)
Q Consensus 355 ~~~i~ 359 (361)
++||+
T Consensus 193 ~~gii 197 (437)
T 4aw2_A 193 QLHYV 197 (437)
T ss_dssp HTTEE
T ss_pred hCCeE
Confidence 99987
No 73
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=87.44 E-value=0.016 Score=53.37 Aligned_cols=65 Identities=5% Similarity=-0.038 Sum_probs=45.3
Q ss_pred cccchhhhccCcccccCc-ccc----cccccccccccCchhhhh-------hhc-cCCCCCCCC----ccceeehhhhhh
Q psy9025 291 SMASKLLRCGSKSLNKRP-HRR----VNRSASADTYFHPKQQRR-------LLH-QTPTGHNNS----FECQVTVHREDI 353 (361)
Q Consensus 291 ~~~~~vl~~~ek~i~~~~-~~~----~~~t~~d~~~~~~l~~~~-------~~~-~~~~~~~~~----~~a~v~~a~~~l 353 (361)
....++ ..|+.++..+ .++ +...+.+...+|+.++.| .+. ... +++. ++++++.|++||
T Consensus 62 ~~~~~~--~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~--~~~~~~~~~~~qi~~aL~~L 137 (353)
T 2i0e_A 62 DDVECT--MVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGR--FKEPHAVFYAAEIAIGLFFL 137 (353)
T ss_dssp TCHHHH--HHHHHHHTCTTCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSS--CCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHH--HHHHHHHHhcCCCCEEeeEEEEEEcCCEEEEEEeCCCCCcHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHH
Confidence 333444 5677777764 455 445788888888888877 222 123 5555 289999999999
Q ss_pred hhcccc
Q psy9025 354 HESHIT 359 (361)
Q Consensus 354 H~~~i~ 359 (361)
|++||+
T Consensus 138 H~~giv 143 (353)
T 2i0e_A 138 QSKGII 143 (353)
T ss_dssp HHTTCB
T ss_pred HHCCEE
Confidence 999997
No 74
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=87.32 E-value=0.016 Score=54.19 Aligned_cols=66 Identities=9% Similarity=0.098 Sum_probs=46.7
Q ss_pred cccchhhhccCcccccCcccc----cccccccccccCchhhhh-------hhccCCCCCCCC----ccceeehhhhhhhh
Q psy9025 291 SMASKLLRCGSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQTPTGHNNS----FECQVTVHREDIHE 355 (361)
Q Consensus 291 ~~~~~vl~~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~~~~~~~~~----~~a~v~~a~~~lH~ 355 (361)
.....+ ..|..++..++++ +...+.+...+|+.++.| .+... ..+++. +++.++.|+.|||+
T Consensus 57 ~~~~~~--~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~LH~ 133 (384)
T 4fr4_A 57 NEVRNV--FKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQN-VHFKEETVKLFICELVMALDYLQN 133 (384)
T ss_dssp TCHHHH--HHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHTT-CCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHH--HHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH
Confidence 333444 5678888888777 455788888888888776 23311 125555 28899999999999
Q ss_pred cccc
Q psy9025 356 SHIT 359 (361)
Q Consensus 356 ~~i~ 359 (361)
+||+
T Consensus 134 ~giv 137 (384)
T 4fr4_A 134 QRII 137 (384)
T ss_dssp TTEE
T ss_pred CCce
Confidence 9997
No 75
>3fjs_A Uncharacterized protein with RMLC-like cupin fold; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha JMP134}
Probab=87.29 E-value=5.4 Score=29.57 Aligned_cols=67 Identities=15% Similarity=0.173 Sum_probs=46.7
Q ss_pred cceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEEeCcEEEEEeCCCCeechhhhhcccCCCceeeEEEecceEEEEE
Q psy9025 139 LRPVLYLPGDYICRKGEVGKEMYIVKTGQVQVVSGETVLATLTEGSVFGEISLLALAGTNRRTADVRSHGFSNLFV 214 (361)
Q Consensus 139 l~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~~~~~~~~l~~Gd~fGe~~ll~~~~~~~~~~~v~A~~~~~~~~ 214 (361)
+....+.+|..+-.--.+.+.+++|++|.+.+.-++. ...+.+||.+=.. ......+.+.+++.++.
T Consensus 38 v~~~~l~~G~~~~~H~H~~~e~~~Vl~G~~~~~i~~~-~~~l~~Gd~i~ip--------~~~~H~~~~~~~~~~~~ 104 (114)
T 3fjs_A 38 VMRMVLPAGKQVGSHSVAGPSTIQCLEGEVEIGVDGA-QRRLHQGDLLYLG--------AGAAHDVNAITNTSLLV 104 (114)
T ss_dssp EEEEEECTTCEEEEECCSSCEEEEEEESCEEEEETTE-EEEECTTEEEEEC--------TTCCEEEEESSSEEEEE
T ss_pred EEEEEECCCCccCceeCCCcEEEEEEECEEEEEECCE-EEEECCCCEEEEC--------CCCcEEEEeCCCcEEEE
Confidence 4456788898877655666799999999999986554 4678999877432 22334566667765443
No 76
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=86.85 E-value=0.012 Score=54.06 Aligned_cols=59 Identities=8% Similarity=0.134 Sum_probs=42.2
Q ss_pred ccCcccccCc-ccc----cccccccccccCchhhhh-------hh-ccCCCCCCCC----ccceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRP-HRR----VNRSASADTYFHPKQQRR-------LL-HQTPTGHNNS----FECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~-~~~----~~~t~~d~~~~~~l~~~~-------~~-~~~~~~~~~~----~~a~v~~a~~~lH~~~i~ 359 (361)
..|+.++..+ .++ +...+.+...+|+.++.| .+ +... +++. ++++++.|++|||++||+
T Consensus 57 ~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~--l~~~~~~~~~~qi~~aL~~LH~~~iv 132 (345)
T 3a8x_A 57 QTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRK--LPEEHARFYSAEISLALNYLHERGII 132 (345)
T ss_dssp HHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSS--CCHHHHHHHHHHHHHHHHHHHHTTCB
T ss_pred HHHHHHHHhcCCCCccCeEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCce
Confidence 5677777664 555 445778888888888876 12 2223 5555 289999999999999997
No 77
>2ozj_A Cupin 2, conserved barrel; cupin superfamily protein, struct genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Desulfitobacterium hafniense}
Probab=86.47 E-value=4.1 Score=29.99 Aligned_cols=66 Identities=11% Similarity=0.241 Sum_probs=42.0
Q ss_pred eEEeCCCCEEEeCCCCCCeEEEEEeeEEEEEeCcEEEEEeCCCCeechhhhhcccCCCceeeEEEecceEEEEEE
Q psy9025 141 PVLYLPGDYICRKGEVGKEMYIVKTGQVQVVSGETVLATLTEGSVFGEISLLALAGTNRRTADVRSHGFSNLFVL 215 (361)
Q Consensus 141 ~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~~~~~~~~l~~Gd~fGe~~ll~~~~~~~~~~~v~A~~~~~~~~l 215 (361)
...+.+|..+-.-..+...+++|++|.+.+.-++. ...+.+||.+=..+ +.+. .+.+.+++.++.+
T Consensus 42 ~~~~~~g~~~~~H~h~~~e~~~vl~G~~~~~i~~~-~~~l~~Gd~i~i~~------~~~H--~~~~~~~~~~~~i 107 (114)
T 2ozj_A 42 LFSFADGESVSEEEYFGDTLYLILQGEAVITFDDQ-KIDLVPEDVLMVPA------HKIH--AIAGKGRFKMLQI 107 (114)
T ss_dssp EEEEETTSSCCCBCCSSCEEEEEEEEEEEEEETTE-EEEECTTCEEEECT------TCCB--EEEEEEEEEEEEE
T ss_pred EEEECCCCccccEECCCCeEEEEEeCEEEEEECCE-EEEecCCCEEEECC------CCcE--EEEeCCCcEEEEE
Confidence 34456776654444566789999999999986554 45799999773322 3333 3344466666554
No 78
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=86.39 E-value=0.013 Score=54.05 Aligned_cols=59 Identities=5% Similarity=0.015 Sum_probs=42.3
Q ss_pred ccCcccccCc-ccc----cccccccccccCchhhhh-------hh-ccCCCCCCCC----ccceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRP-HRR----VNRSASADTYFHPKQQRR-------LL-HQTPTGHNNS----FECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~-~~~----~~~t~~d~~~~~~l~~~~-------~~-~~~~~~~~~~----~~a~v~~a~~~lH~~~i~ 359 (361)
..|+.++..+ .++ +...+.+...+|+.++.| .+ .... +++. ++++++.|++|||++||+
T Consensus 71 ~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~--~~~~~~~~~~~qi~~aL~~LH~~giv 146 (353)
T 3txo_A 71 MTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRR--FDEARARFYAAEIISALMFLHDKGII 146 (353)
T ss_dssp HHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSS--CCHHHHHHHHHHHHHHHHHHHHTTCB
T ss_pred HHHHHHHHhccCCCceeeEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCCc
Confidence 5667777664 455 455788888888888877 12 2223 5555 389999999999999997
No 79
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=86.33 E-value=4.2 Score=34.44 Aligned_cols=68 Identities=12% Similarity=0.201 Sum_probs=52.7
Q ss_pred cceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEEeCcEEEEEeCCCCeechhhhhcccCCCceeeEEEecceEEEEEE
Q psy9025 139 LRPVLYLPGDYICRKGEVGKEMYIVKTGQVQVVSGETVLATLTEGSVFGEISLLALAGTNRRTADVRSHGFSNLFVL 215 (361)
Q Consensus 139 l~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~~~~~~~~l~~Gd~fGe~~ll~~~~~~~~~~~v~A~~~~~~~~l 215 (361)
+....+.+|+.+-..--+.+.+++|++|.+++.-++.. ..+.+||++=- .......+.|.+++.++.+
T Consensus 39 ~~~~~~~~G~~~~~h~h~~~~~~~Vl~G~~~~~i~~~~-~~l~~Gd~~~~--------p~~~~H~~~a~~~~~~l~i 106 (227)
T 3rns_A 39 ISLFSLAKDEEITAEAMLGNRYYYCFNGNGEIFIENNK-KTISNGDFLEI--------TANHNYSIEARDNLKLIEI 106 (227)
T ss_dssp EEEEEECTTCEEEECSCSSCEEEEEEESEEEEEESSCE-EEEETTEEEEE--------CSSCCEEEEESSSEEEEEE
T ss_pred EEEEEECCCCccCccccCCCEEEEEEeCEEEEEECCEE-EEECCCCEEEE--------CCCCCEEEEECCCcEEEEE
Confidence 45677899999988878899999999999999855433 67899987632 2333556778899998877
No 80
>3pjs_K KCSA, voltage-gated potassium channel; ION channel, conducts K+ IONS, cell membrane, transport PROT; 3.80A {Streptomyces lividans} PDB: 1f6g_A
Probab=86.27 E-value=0.17 Score=41.11 Aligned_cols=40 Identities=10% Similarity=0.032 Sum_probs=32.0
Q ss_pred eecCCCCccccc---ceeecceeeeehhhHHHHHhhhhhhccc
Q psy9025 3 IYPRNNETEANT---WLRKESVPEQVRGDIESGVDEDEEYHDS 42 (361)
Q Consensus 3 ~~~~~~~~~~~~---~l~g~~vfayiiG~i~s~~~~~~~~~~~ 42 (361)
++|.+...+..+ +++|.+++++++|.+++.+.+.......
T Consensus 87 i~P~t~~~r~~~~~~~l~G~~~~~~~~~~i~~~~~~~~~~~~~ 129 (166)
T 3pjs_K 87 LYPVTLWGRLVAVVVMVAGITSFGLVTAALATWFVGQEQQQQQ 129 (166)
T ss_dssp SCCCSSTTTTTTHHHHHHHHHHHHHHHTTSSSSSSSSHHHHHH
T ss_pred CCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 578888888664 7799999999999999998876554443
No 81
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=85.75 E-value=0.013 Score=53.83 Aligned_cols=59 Identities=7% Similarity=0.011 Sum_probs=42.5
Q ss_pred ccCcccccCc-ccc----cccccccccccCchhhhh-------hhc-cCCCCCCCC----ccceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRP-HRR----VNRSASADTYFHPKQQRR-------LLH-QTPTGHNNS----FECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~-~~~----~~~t~~d~~~~~~l~~~~-------~~~-~~~~~~~~~----~~a~v~~a~~~lH~~~i~ 359 (361)
..|+.++..+ .++ +...+.+...+|+.++.| .+. ... +++. ++++++.|++|||++||+
T Consensus 65 ~~E~~il~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~--~~~~~~~~~~~qi~~aL~~LH~~~iv 140 (345)
T 1xjd_A 65 MVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHK--FDLSRATFYAAEIILGLQFLHSKGIV 140 (345)
T ss_dssp HHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSS--CCHHHHHHHHHHHHHHHHHHHHTTCB
T ss_pred HHHHHHHHhcCCCCCCCcEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCeE
Confidence 5677777663 566 455888888888888876 222 123 5554 289999999999999997
No 82
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=84.93 E-value=0.067 Score=48.06 Aligned_cols=61 Identities=11% Similarity=0.043 Sum_probs=45.1
Q ss_pred ccCcccccCcccc----cccccccccccCchhhhh-------hhcc------------CCCCCCCC----ccceeehhhh
Q psy9025 299 CGSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQ------------TPTGHNNS----FECQVTVHRE 351 (361)
Q Consensus 299 ~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~------------~~~~~~~~----~~a~v~~a~~ 351 (361)
..|-.+|.++++| ++..+.+...+|+.||.| ++++ .+..+++. ++..++.|+.
T Consensus 63 ~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~ 142 (299)
T 4asz_A 63 HREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMV 142 (299)
T ss_dssp HHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCccEEEEEeeCCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHH
Confidence 5688888898888 455777888888888887 2321 11224544 2889999999
Q ss_pred hhhhcccc
Q psy9025 352 DIHESHIT 359 (361)
Q Consensus 352 ~lH~~~i~ 359 (361)
|||++|||
T Consensus 143 yLH~~~ii 150 (299)
T 4asz_A 143 YLASQHFV 150 (299)
T ss_dssp HHHHTTCC
T ss_pred HHHhCCcc
Confidence 99999997
No 83
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=84.71 E-value=0.075 Score=47.73 Aligned_cols=60 Identities=10% Similarity=0.007 Sum_probs=38.5
Q ss_pred ccCcccccCcccc-c---cccc------------ccccccCchhhhh-------hhccCCCCCCCC-------ccceeeh
Q psy9025 299 CGSKSLNKRPHRR-V---NRSA------------SADTYFHPKQQRR-------LLHQTPTGHNNS-------FECQVTV 348 (361)
Q Consensus 299 ~~ek~i~~~~~~~-~---~~t~------------~d~~~~~~l~~~~-------~~~~~~~~~~~~-------~~a~v~~ 348 (361)
..|-.+|..+++| + +..+ .+..++|+.||.| ++++.. .+.+. +..+++.
T Consensus 51 ~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~~~~~l~ivmE~~~gg~L~~~l~~~~-~~~~~~~~~~~~i~~qi~~ 129 (299)
T 4g31_A 51 MREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRC-TIEERERSVCLHIFLQIAE 129 (299)
T ss_dssp HHHHHHHTTCCCTTBCCEEEEEEEEC----------CEEEEEEEECCCSCCHHHHHHTCC-SGGGSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCCeEEEEEEecCccccccccCCCcEEEEEEecCCCCcHHHHHHhcC-CCChhHHHHHHHHHHHHHH
Confidence 4577778887777 2 2222 2334688899888 233211 12221 2678999
Q ss_pred hhhhhhhcccc
Q psy9025 349 HREDIHESHIT 359 (361)
Q Consensus 349 a~~~lH~~~i~ 359 (361)
|++|||++||+
T Consensus 130 al~ylH~~~Ii 140 (299)
T 4g31_A 130 AVEFLHSKGLM 140 (299)
T ss_dssp HHHHHHHTTCC
T ss_pred HHHHHHHCcCc
Confidence 99999999997
No 84
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=83.73 E-value=0.05 Score=48.71 Aligned_cols=59 Identities=10% Similarity=-0.031 Sum_probs=41.8
Q ss_pred ccCcccccCcccc-c---cccc----ccccccCchhhhh-------hh-ccCCCCCCCC----ccceeehhhhhhhhcc-
Q psy9025 299 CGSKSLNKRPHRR-V---NRSA----SADTYFHPKQQRR-------LL-HQTPTGHNNS----FECQVTVHREDIHESH- 357 (361)
Q Consensus 299 ~~ek~i~~~~~~~-~---~~t~----~d~~~~~~l~~~~-------~~-~~~~~~~~~~----~~a~v~~a~~~lH~~~- 357 (361)
..|-.+|..+++| + +..+ ....++|+.||.| ++ +..+ +++. ++..++.|++|||++|
T Consensus 73 ~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvmEy~~gg~L~~~l~~~~~--l~~~~~~~~~~qi~~aL~ylH~~~~ 150 (290)
T 3fpq_A 73 KEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKV--MKIKVLRSWCRQILKGLQFLHTRTP 150 (290)
T ss_dssp HHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEEECCCSCBHHHHHHHHSS--CCHHHHHHHHHHHHHHHHHHHTSSS
T ss_pred HHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEEeCCCCCCHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCC
Confidence 5678888888888 3 3333 3356788888877 23 2233 5555 3789999999999999
Q ss_pred -cc
Q psy9025 358 -IT 359 (361)
Q Consensus 358 -i~ 359 (361)
||
T Consensus 151 ~Ii 153 (290)
T 3fpq_A 151 PII 153 (290)
T ss_dssp CCC
T ss_pred CEE
Confidence 86
No 85
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=83.56 E-value=0.04 Score=51.00 Aligned_cols=57 Identities=9% Similarity=-0.017 Sum_probs=42.1
Q ss_pred ccCcccccCc-ccc----cccccccccccCchhhhh-------hhccCCCCCCCC----ccceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRP-HRR----VNRSASADTYFHPKQQRR-------LLHQTPTGHNNS----FECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~-~~~----~~~t~~d~~~~~~l~~~~-------~~~~~~~~~~~~----~~a~v~~a~~~lH~~~i~ 359 (361)
..|..++..+ .++ +...+.+..++|+.|+.| +++ . +++. +..+++.|++|||++||+
T Consensus 67 ~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvmE~~~g~~L~~~~~--~--l~~~~~~~~~~qll~al~ylH~~gIi 139 (361)
T 4f9c_A 67 AAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDILN--S--LSFQEVREYMLNLFKALKRIHQFGIV 139 (361)
T ss_dssp HHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEEECCCCCCHHHHHT--T--CCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHHhcCCCCCceEEEEEEECCEEEEEEeCCCcccHHHHHc--C--CCHHHHHHHHHHHHHHHHHHHHCCeE
Confidence 4566666664 455 556888889999999887 232 2 4544 388999999999999997
No 86
>3ibm_A Cupin 2, conserved barrel domain protein; cupin 2 family, metal-binding site, beta barrel, PSI-2, NYSG structural genomics; 2.00A {Halorhodospira halophila SL1}
Probab=82.68 E-value=11 Score=30.20 Aligned_cols=89 Identities=13% Similarity=0.102 Sum_probs=52.8
Q ss_pred cceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEEeCcEEEEEeCCCCeechhhhhcccCCCceeeEEEe-cceEEEEEEe-
Q psy9025 139 LRPVLYLPGDYICRKGEVGKEMYIVKTGQVQVVSGETVLATLTEGSVFGEISLLALAGTNRRTADVRS-HGFSNLFVLN- 216 (361)
Q Consensus 139 l~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~~~~~~~~l~~Gd~fGe~~ll~~~~~~~~~~~v~A-~~~~~~~~l~- 216 (361)
+....+.+|..+-..--....+++|++|.+.+.-++. ...+.+||++=..+ +.+....... .+++.++.+-
T Consensus 58 ~~~~~l~pG~~~~~H~H~~~E~~~Vl~G~~~~~i~~~-~~~l~~Gd~i~ip~------~~~H~~~n~~~~~~~~~l~i~~ 130 (167)
T 3ibm_A 58 TRYFEVEPGGYTTLERHEHTHVVMVVRGHAEVVLDDR-VEPLTPLDCVYIAP------HAWHQIHATGANEPLGFLCIVD 130 (167)
T ss_dssp EEEEEECTTCBCCCBBCSSCEEEEEEESEEEEEETTE-EEEECTTCEEEECT------TCCEEEEEESSSCCEEEEEEEE
T ss_pred EEEEEECCCCCCCCccCCCcEEEEEEeCEEEEEECCE-EEEECCCCEEEECC------CCcEEEEeCCCCCCEEEEEEEe
Confidence 3455667777654433457889999999999985554 56789999773322 3343333333 3455544442
Q ss_pred ---------HHHHHHHHHHCHHHHHHH
Q psy9025 217 ---------KDDLNEAIEYYPNAQEVL 234 (361)
Q Consensus 217 ---------~~~f~~ll~~~p~~~~~~ 234 (361)
...-..-+..+|.++.++
T Consensus 131 ~~~d~p~~p~~~~~~~l~~~~~~~~~~ 157 (167)
T 3ibm_A 131 SDRDRPQRPDADDLARMCADPAVARRI 157 (167)
T ss_dssp SSCCCCBCCCHHHHHHHTTSHHHHHHC
T ss_pred CCcCcccCCCHHHHHHHHcChHHHHhh
Confidence 233333455677776554
No 87
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=81.60 E-value=0.12 Score=47.03 Aligned_cols=61 Identities=8% Similarity=-0.075 Sum_probs=44.1
Q ss_pred ccCcccccCcccc----cccccccccccCchhhhh-------hhccCC--------------CCCCCC----ccceeehh
Q psy9025 299 CGSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQTP--------------TGHNNS----FECQVTVH 349 (361)
Q Consensus 299 ~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~~~--------------~~~~~~----~~a~v~~a 349 (361)
..|-.+|..++|+ ++..+.+...+|+.||.| ++++.. ..+++. ++..++.|
T Consensus 91 ~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~g 170 (329)
T 4aoj_A 91 QREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAG 170 (329)
T ss_dssp HHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHH
Confidence 5688889999888 455777888888898887 232110 013333 28889999
Q ss_pred hhhhhhcccc
Q psy9025 350 REDIHESHIT 359 (361)
Q Consensus 350 ~~~lH~~~i~ 359 (361)
+.|||++|||
T Consensus 171 l~yLH~~~ii 180 (329)
T 4aoj_A 171 MVYLAGLHFV 180 (329)
T ss_dssp HHHHHHTTCC
T ss_pred HHHHhcCCee
Confidence 9999999997
No 88
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=81.41 E-value=0.041 Score=53.89 Aligned_cols=81 Identities=11% Similarity=0.048 Sum_probs=52.1
Q ss_pred CcchhHH-HhhcccCcccchhhhccCcccccCcccc----cccccccccccCchhhhh-------hhccC---CCCCCCC
Q psy9025 277 PKLLPIV-MQVVPQNSMASKLLRCGSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQT---PTGHNNS 341 (361)
Q Consensus 277 ~~~l~~~-~~~i~~~~~~~~vl~~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~~---~~~~~~~ 341 (361)
..++|.+ +..+........+ ..|..++..++++ +...+.+...+|+.++.| .+... ...+++.
T Consensus 212 ~vAiK~l~k~~~~~~~~~~~~--~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~ 289 (543)
T 3c4z_A 212 LYACKKLNKKRLKKRKGYQGA--MVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEP 289 (543)
T ss_dssp EEEEEEEEHHHHHHTTCHHHH--HHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHTSSTTSCSCCHH
T ss_pred EEEEEEEEhHHhhhhHHHHHH--HHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEEEeccCCCHHHHHHHhhcccccccHH
Confidence 3444544 3333333334445 5688888888877 345778888888888776 12211 1125554
Q ss_pred c----cceeehhhhhhhhcccc
Q psy9025 342 F----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 342 ~----~a~v~~a~~~lH~~~i~ 359 (361)
. +++++.|++|||++||+
T Consensus 290 ~~~~~~~qi~~aL~~LH~~gIv 311 (543)
T 3c4z_A 290 RAIFYTAQIVSGLEHLHQRNII 311 (543)
T ss_dssp HHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHHHHHHHHHHHcCCc
Confidence 2 88999999999999987
No 89
>1yhf_A Hypothetical protein SPY1581; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; 2.00A {Streptococcus pyogenes} SCOP: b.82.1.9
Probab=81.37 E-value=13 Score=26.99 Aligned_cols=68 Identities=12% Similarity=0.140 Sum_probs=44.8
Q ss_pred cceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEEeCcEEEEEeCCCCeechhhhhcccCCCceeeEEEecceEEEEEE
Q psy9025 139 LRPVLYLPGDYICRKGEVGKEMYIVKTGQVQVVSGETVLATLTEGSVFGEISLLALAGTNRRTADVRSHGFSNLFVL 215 (361)
Q Consensus 139 l~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~~~~~~~~l~~Gd~fGe~~ll~~~~~~~~~~~v~A~~~~~~~~l 215 (361)
+....+.+|..+-.--.....+++|.+|.+.+.-++.. ..+.+||++=..+ +.+ ..+.+.+++.++.+
T Consensus 42 ~~~~~~~~g~~~~~H~H~~~e~~~vl~G~~~~~~~~~~-~~l~~Gd~~~ip~------~~~--H~~~~~~~~~~~~v 109 (115)
T 1yhf_A 42 ITVFSLDKGQEIGRHSSPGDAMVTILSGLAEITIDQET-YRVAEGQTIVMPA------GIP--HALYAVEAFQMLLV 109 (115)
T ss_dssp EEEEEECTTCEEEEECCSSEEEEEEEESEEEEEETTEE-EEEETTCEEEECT------TSC--EEEEESSCEEEEEE
T ss_pred EEEEEECCCCccCCEECCCcEEEEEEeCEEEEEECCEE-EEECCCCEEEECC------CCC--EEEEECCCceEEEE
Confidence 44556788887654444467899999999999855543 5789999873221 233 34555667766654
No 90
>2fqp_A Hypothetical protein BP2299; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: 1PE; 1.80A {Bordetella pertussis tohama I}
Probab=81.15 E-value=3.9 Score=29.23 Aligned_cols=49 Identities=18% Similarity=0.199 Sum_probs=33.7
Q ss_pred ceEEeCCCCEEEeCCCCCC-eEEEEEeeEEEEEeCcE-EEEEeCCCCeech
Q psy9025 140 RPVLYLPGDYICRKGEVGK-EMYIVKTGQVQVVSGET-VLATLTEGSVFGE 188 (361)
Q Consensus 140 ~~~~~~~ge~I~~~G~~~~-~ly~I~~G~v~v~~~~~-~~~~l~~Gd~fGe 188 (361)
....+.||...-..--+.. .+++|++|.+.+.-++. ....+.+||.+=.
T Consensus 21 ~~~~~~Pg~~~~~H~H~~~~e~~~Vl~G~~~~~~~~g~~~~~l~~Gd~~~~ 71 (97)
T 2fqp_A 21 TEWRFPPGGETGWHRHSMDYVVVPMTTGPLLLETPEGSVTSQLTRGVSYTR 71 (97)
T ss_dssp EEEEECTTCBCCSEECCSCEEEEESSCEEEEEEETTEEEEEEECTTCCEEE
T ss_pred EEEEECCCCCCCCEECCCCcEEEEEeecEEEEEeCCCCEEEEEcCCCEEEe
Confidence 3456778776432223344 59999999999986553 5678999998733
No 91
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=80.93 E-value=0.16 Score=45.70 Aligned_cols=60 Identities=12% Similarity=0.028 Sum_probs=40.9
Q ss_pred ccCcccccCcccc-c---ccccccccccCchhhhh-------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRPHRR-V---NRSASADTYFHPKQQRR-------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~~~-~---~~t~~d~~~~~~l~~~~-------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
..|-.+|..++++ + +.-+ ....+|+.||.| .++.....+++.- +..++.|++|||++|||
T Consensus 80 ~~E~~il~~l~HpNIV~l~g~~-~~~~~~iVmEy~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~~Ii 154 (307)
T 3omv_A 80 RNEVAVLRKTRHVNILLFMGYM-TKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNII 154 (307)
T ss_dssp HHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCB
T ss_pred HHHHHHHHhCCCCCEeeEEEEE-ECCeEEEEEEcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 5678888888888 2 2223 234467888877 3432222255542 88999999999999997
No 92
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=80.65 E-value=0.059 Score=54.22 Aligned_cols=96 Identities=9% Similarity=-0.012 Sum_probs=58.7
Q ss_pred cccccccccCCCCCCCC-----------CcchhHH-HhhcccCcccchhhhccCcccccCc-ccc----ccccccccccc
Q psy9025 260 DASSVLLDRKGEEPKQA-----------PKLLPIV-MQVVPQNSMASKLLRCGSKSLNKRP-HRR----VNRSASADTYF 322 (361)
Q Consensus 260 ~~~l~~~~~~~~~~~~~-----------~~~l~~~-~~~i~~~~~~~~vl~~~ek~i~~~~-~~~----~~~t~~d~~~~ 322 (361)
..++.+...+|.+..+. ..++|.+ +..+......... ..|+.++..+ +++ +...+.+...+
T Consensus 340 ~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~--~~E~~~l~~~~~~~~i~~l~~~~~~~~~~ 417 (674)
T 3pfq_A 340 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECT--MVEKRVLALPGKPPFLTQLHSCFQTMDRL 417 (674)
T ss_dssp CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHH--HHHHHHHTCTTCCTTBCCEEEECBCSSEE
T ss_pred ccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHH--HHHHHHHHhccCCCeEEEEEEEEEeCCEE
Confidence 34555666666655433 2344444 2223233333444 5677777764 444 44578888888
Q ss_pred Cchhhhh-------hhc-cCCCCCCCC----ccceeehhhhhhhhcccc
Q psy9025 323 HPKQQRR-------LLH-QTPTGHNNS----FECQVTVHREDIHESHIT 359 (361)
Q Consensus 323 ~~l~~~~-------~~~-~~~~~~~~~----~~a~v~~a~~~lH~~~i~ 359 (361)
|+.|+.| .+. ... +++. +++.++.|++|||++||+
T Consensus 418 ~lV~E~~~gg~L~~~l~~~~~--~~~~~~~~~~~qi~~aL~~LH~~gIi 464 (674)
T 3pfq_A 418 YFVMEYVNGGDLMYHIQQVGR--FKEPHAVFYAAEIAIGLFFLQSKGII 464 (674)
T ss_dssp EEEEECCCSCBHHHHHHHHSS--CCHHHHHHHHHHHHHHHHHHHHTSEE
T ss_pred EEEEeCcCCCcHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHhCCeE
Confidence 8888877 222 123 5555 399999999999999997
No 93
>3lwc_A Uncharacterized protein; structural genomics, unknown function, joint center for STRU genomics, JCSG, protein structure initiative; HET: MSE; 1.40A {Rhizobium leguminosarum}
Probab=80.49 E-value=15 Score=27.54 Aligned_cols=48 Identities=19% Similarity=0.215 Sum_probs=35.6
Q ss_pred ceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEEeCcEEEEEeCCCCeechh
Q psy9025 140 RPVLYLPGDYICRKGEVGKEMYIVKTGQVQVVSGETVLATLTEGSVFGEI 189 (361)
Q Consensus 140 ~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~~~~~~~~l~~Gd~fGe~ 189 (361)
....+.+|..+-.. ...+.+++|++|.+.+.-++. ...+++||++--.
T Consensus 43 ~~~~~~pG~~~~~H-~~~~E~~~Vl~G~~~~~~~g~-~~~l~~GD~v~ip 90 (119)
T 3lwc_A 43 GYGRYAPGQSLTET-MAVDDVMIVLEGRLSVSTDGE-TVTAGPGEIVYMP 90 (119)
T ss_dssp EEEEECTTCEEEEE-CSSEEEEEEEEEEEEEEETTE-EEEECTTCEEEEC
T ss_pred EEEEECCCCCcCcc-CCCCEEEEEEeCEEEEEECCE-EEEECCCCEEEEC
Confidence 34567888766543 377899999999999986544 4579999987443
No 94
>3eff_K Voltage-gated potassium channel; FULL length KCSA, bulge helix, cell membrane, ION transport, ionic channel, membrane, transmembrane; 3.80A {Streptomyces lividans}
Probab=78.68 E-value=0.4 Score=37.58 Aligned_cols=37 Identities=11% Similarity=-0.012 Sum_probs=29.3
Q ss_pred eecCCCCcccc---cceeecceeeeehhhHHHHHhhhhhh
Q psy9025 3 IYPRNNETEAN---TWLRKESVPEQVRGDIESGVDEDEEY 39 (361)
Q Consensus 3 ~~~~~~~~~~~---~~l~g~~vfayiiG~i~s~~~~~~~~ 39 (361)
++|.+...+.. .+++|.+++++++|.+++.+.+....
T Consensus 60 ~~P~t~~~r~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~ 99 (139)
T 3eff_K 60 LYPVTLWGRLVAVVVMVAGITSFGLVTAALATWFVGREQE 99 (139)
T ss_dssp SCCCSSHHHHHHHHHHHHHHHHHHHHHHHHTTTTTHHHHH
T ss_pred CcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 57888777755 47799999999999999988665543
No 95
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=78.39 E-value=0.094 Score=50.25 Aligned_cols=59 Identities=14% Similarity=0.058 Sum_probs=42.1
Q ss_pred ccCcccccCcccc----cccccccccccCchhhhh--------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRPHRR----VNRSASADTYFHPKQQRR--------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~--------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
..|-.++..++++ +...+.+..++|+.++.| +....+ +++.- ...++.|+.|||++||+
T Consensus 74 ~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~--~~~~~~~~i~~qi~~~l~~lH~~~iv 148 (484)
T 3nyv_A 74 LREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR--FSEVDAARIIRQVLSGITYMHKNKIV 148 (484)
T ss_dssp HHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHTCSC--CBHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEecCCCCCHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 5677777777777 445777788888887766 222222 44442 88899999999999997
No 96
>3jzv_A Uncharacterized protein RRU_A2000; structural genomics, cupin-2 fold, unknown function, PSI-2, structure initiative; HET: MSE; 2.30A {Rhodospirillum rubrum}
Probab=78.23 E-value=9.8 Score=30.49 Aligned_cols=88 Identities=6% Similarity=-0.008 Sum_probs=51.1
Q ss_pred eEEeCCCCEEEeCCCCCCeEEEEEeeEEEEEeCcEEEEEeCCCCeechhhhhcccCCCceeeEEEecceEEEEEE-----
Q psy9025 141 PVLYLPGDYICRKGEVGKEMYIVKTGQVQVVSGETVLATLTEGSVFGEISLLALAGTNRRTADVRSHGFSNLFVL----- 215 (361)
Q Consensus 141 ~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~~~~~~~~l~~Gd~fGe~~ll~~~~~~~~~~~v~A~~~~~~~~l----- 215 (361)
...+.||..+-.---....+++|++|.+.+.-++. ...+.+||++=..+ +.+........+++.++.+
T Consensus 57 ~~~l~pG~~~~~H~H~~~E~~~Vl~G~~~~~v~g~-~~~l~~GD~i~ip~------g~~H~~~n~~~~~~~~l~i~~~~~ 129 (166)
T 3jzv_A 57 YFEVGPGGHSTLERHQHAHGVMILKGRGHAMVGRA-VSAVAPYDLVTIPG------WSWHQFRAPADEALGFLCMVNAER 129 (166)
T ss_dssp EEEEEEEEECCCBBCSSCEEEEEEEECEEEEETTE-EEEECTTCEEEECT------TCCEEEECCTTSCEEEEEEEESSC
T ss_pred EEEECCCCccCceeCCCcEEEEEEeCEEEEEECCE-EEEeCCCCEEEECC------CCcEEeEeCCCCCEEEEEEEccCC
Confidence 34556666554333445789999999999985554 46789999773322 2333222222333333332
Q ss_pred -----eHHHHHHHHHHCHHHHHHHH
Q psy9025 216 -----NKDDLNEAIEYYPNAQEVLK 235 (361)
Q Consensus 216 -----~~~~f~~ll~~~p~~~~~~~ 235 (361)
+..+...-+..+|.++.++.
T Consensus 130 d~p~~p~~~~l~~l~~~~~~~~~~~ 154 (166)
T 3jzv_A 130 DKPQLPTEADLAMLRADDAVAAFLD 154 (166)
T ss_dssp CCCBCCCHHHHHHHHTSHHHHHHHT
T ss_pred CCCCCCCHHHHHHHHhCcchhhhhc
Confidence 34455555667887776654
No 97
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=78.22 E-value=0.15 Score=50.13 Aligned_cols=59 Identities=3% Similarity=-0.100 Sum_probs=42.8
Q ss_pred ccCcccccCcc-cc-cc---cccccccccCchhhhh--------hhccCCCCCCCC-ccceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRPH-RR-VN---RSASADTYFHPKQQRR--------LLHQTPTGHNNS-FECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~-~~-~~---~t~~d~~~~~~l~~~~--------~~~~~~~~~~~~-~~a~v~~a~~~lH~~~i~ 359 (361)
..|-.+|.++. ++ ++ ..+.|+..+|+.||.| +-++++ +++. ..+.++.|++|+|++|||
T Consensus 289 ~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVMEyv~G~~L~d~i~~~~~--l~~~~I~~QIl~AL~ylH~~GII 361 (569)
T 4azs_A 289 HNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVMEKLPGRLLSDMLAAGEE--IDREKILGSLLRSLAALEKQGFW 361 (569)
T ss_dssp HHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEEECCCSEEHHHHHHTTCC--CCHHHHHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEEecCCCCcHHHHHHhCCC--CCHHHHHHHHHHHHHHHHHCCce
Confidence 44566677753 33 44 4778888999999988 334344 5444 389999999999999997
No 98
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=77.70 E-value=0.056 Score=48.51 Aligned_cols=61 Identities=18% Similarity=0.112 Sum_probs=42.2
Q ss_pred ccCcccccCcccc----cccccccccccCchhhhh------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRPHRR----VNRSASADTYFHPKQQRR------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
..|..++..++++ +...+.+...+++.++.| .+.....++++.. ...++.|+.|||++||+
T Consensus 67 ~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~iv 141 (311)
T 3niz_A 67 IREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRIL 141 (311)
T ss_dssp HHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEECCSEEHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 4566677776666 445677778888888766 2332233355542 78999999999999986
No 99
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=77.55 E-value=0.15 Score=48.27 Aligned_cols=59 Identities=5% Similarity=0.048 Sum_probs=38.4
Q ss_pred ccCcccccCcccc----cccccccccccCchhhhh--------hhccCCCCCCCCc----cceeehhhhhhhh-cccc
Q psy9025 299 CGSKSLNKRPHRR----VNRSASADTYFHPKQQRR--------LLHQTPTGHNNSF----ECQVTVHREDIHE-SHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~--------~~~~~~~~~~~~~----~a~v~~a~~~lH~-~~i~ 359 (361)
..|..++..++++ +...+.+...+|+.++.| +.+... +++.. +..++.|++|||+ +||+
T Consensus 196 ~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~qi~~aL~~LH~~~gii 271 (446)
T 4ejn_A 196 LTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERV--FSEDRARFYGAEIVSALDYLHSEKNVV 271 (446)
T ss_dssp -----CCCCCSCTTSCCEEEEEEETTEEEEEECCCSSCBHHHHHHHHSC--CCHHHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHhCCCCeEeeEEEEEeeCCEEEEEEeeCCCCcHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHhhcCCEE
Confidence 5677888887777 344677777777787766 222222 55542 7899999999998 8987
No 100
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=77.46 E-value=0.11 Score=45.88 Aligned_cols=61 Identities=11% Similarity=-0.001 Sum_probs=40.0
Q ss_pred ccCcccccCcccc----cccccccccccCchhhhh------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRPHRR----VNRSASADTYFHPKQQRR------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
..|-.++..++++ +...+.+...+++.++.| .+.....++++.. ..+++.|+.|||++||+
T Consensus 48 ~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~ 122 (288)
T 1ob3_A 48 IREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVL 122 (288)
T ss_dssp HHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEecCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 3566666666666 344666677777777765 2332222244442 78999999999999997
No 101
>3es1_A Cupin 2, conserved barrel domain protein; YP_001165807.1; HET: MSE; 1.91A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}
Probab=76.88 E-value=3.3 Score=33.62 Aligned_cols=48 Identities=21% Similarity=0.283 Sum_probs=32.4
Q ss_pred cceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEEeCcEEEEEeCCCCee
Q psy9025 139 LRPVLYLPGDYICRKGEVGKEMYIVKTGQVQVVSGETVLATLTEGSVF 186 (361)
Q Consensus 139 l~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~~~~~~~~l~~Gd~f 186 (361)
+....+.||...-.--.....+++|++|.+.+.-++.....+++||.+
T Consensus 81 ~~~v~l~PG~~~~~H~H~~eE~~~VLeGel~l~ld~ge~~~L~~GDsi 128 (172)
T 3es1_A 81 IRVVDMLPGKESPMHRTNSIDYGIVLEGEIELELDDGAKRTVRQGGII 128 (172)
T ss_dssp EEEEEECTTCBCCCBCCSEEEEEEEEESCEEEECGGGCEEEECTTCEE
T ss_pred EEEEEECCCCCCCCeecCceEEEEEEeCEEEEEECCCeEEEECCCCEE
Confidence 445667777654322233456889999999998442234679999998
No 102
>2pfw_A Cupin 2, conserved barrel domain protein; cupin domain, struc genomics, joint center for structural genomics, JCSG; 1.90A {Shewanella frigidimarina}
Probab=76.35 E-value=19 Score=26.08 Aligned_cols=68 Identities=13% Similarity=0.022 Sum_probs=44.5
Q ss_pred cceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEEeCcEEEEEeCCCCeechhhhhcccCCCceeeEEEecceEEEEEE
Q psy9025 139 LRPVLYLPGDYICRKGEVGKEMYIVKTGQVQVVSGETVLATLTEGSVFGEISLLALAGTNRRTADVRSHGFSNLFVL 215 (361)
Q Consensus 139 l~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~~~~~~~~l~~Gd~fGe~~ll~~~~~~~~~~~v~A~~~~~~~~l 215 (361)
+....+.+|..+-.---....+++|++|.+.+.-++. ...+.+||++=..+ +. ...+.+.+++.++.+
T Consensus 36 ~~~~~~~pg~~~~~H~H~~~e~~~vl~G~~~~~~~~~-~~~l~~Gd~~~ip~------~~--~H~~~~~~~~~~l~v 103 (116)
T 2pfw_A 36 AVKIWFDKGAEGYVHAHRHSQVSYVVEGEFHVNVDGV-IKVLTAGDSFFVPP------HV--DHGAVCPTGGILIDT 103 (116)
T ss_dssp EEEEEECTTEEEEEECCSSEEEEEEEEECEEEEETTE-EEEECTTCEEEECT------TC--CEEEEESSCEEEEEE
T ss_pred EEEEEECCCCcCCcEECCcceEEEEEeeEEEEEECCE-EEEeCCCCEEEECc------CC--ceeeEeCCCcEEEEE
Confidence 4456678887754333346789999999999985544 46799999863221 22 334555667776665
No 103
>3h8u_A Uncharacterized conserved protein with double-STR beta-helix domain; YP_001338853.1; HET: 2PE; 1.80A {Klebsiella pneumoniae subsp}
Probab=76.24 E-value=7.2 Score=29.10 Aligned_cols=47 Identities=15% Similarity=0.246 Sum_probs=33.5
Q ss_pred cceEEeCCCCEEEeCCCCC-CeEEEEEeeEEEEEe-CcEEEEEeCCCCee
Q psy9025 139 LRPVLYLPGDYICRKGEVG-KEMYIVKTGQVQVVS-GETVLATLTEGSVF 186 (361)
Q Consensus 139 l~~~~~~~ge~I~~~G~~~-~~ly~I~~G~v~v~~-~~~~~~~l~~Gd~f 186 (361)
+....+.||..+-..-... ..+++|++|.+.+.- ++ ....+.+||++
T Consensus 41 ~~~~~~~pg~~~~~H~H~~~~e~~~Vl~G~~~~~~~~~-~~~~l~~Gd~~ 89 (125)
T 3h8u_A 41 VVVWHAHPGQEIASHVHPHGQDTWTVISGEAEYHQGNG-IVTHLKAGDIA 89 (125)
T ss_dssp EEEEEECTTCEECCC-CTTCEEEEEEEECEEEEECSTT-CEEEEETTEEE
T ss_pred EEEEEECCCCcCCcccCCCCeEEEEEEEeEEEEEECCC-eEEEeCCCCEE
Confidence 4456778888765444443 678999999999985 33 34678899976
No 104
>3vou_A ION transport 2 domain protein, voltage-gated SOD channel; 4-helical bundle, ION channel, membrane, transport protein; 3.20A {Bacillus weihenstephanensis}
Probab=75.32 E-value=0.35 Score=38.42 Aligned_cols=32 Identities=9% Similarity=-0.004 Sum_probs=24.2
Q ss_pred eecCCCCccccc---ceeecceeeeehhhHHHHHh
Q psy9025 3 IYPRNNETEANT---WLRKESVPEQVRGDIESGVD 34 (361)
Q Consensus 3 ~~~~~~~~~~~~---~l~g~~vfayiiG~i~s~~~ 34 (361)
++|.+...+..+ +++|.++|++++|.+++.+.
T Consensus 72 ~~p~t~~~r~~~~~~~~~g~~~~~~~~~~~~~~~~ 106 (148)
T 3vou_A 72 FSPQTDFGKVFTILYIFIGIGLVFGFIHKLAVNVQ 106 (148)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_pred CCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 567776666553 67999999999999987443
No 105
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=74.21 E-value=0.077 Score=46.90 Aligned_cols=61 Identities=8% Similarity=-0.024 Sum_probs=40.3
Q ss_pred ccCcccccCcccc----cccccccccccCchhhhh------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRPHRR----VNRSASADTYFHPKQQRR------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
..|-.++..++++ +...+.+...+++.++.| .+......+++.. +..++.|+.|||++||+
T Consensus 49 ~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~iv 123 (292)
T 3o0g_A 49 LREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVL 123 (292)
T ss_dssp HHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEecCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 3455666666666 444666777777887766 1221112255553 88999999999999986
No 106
>4e2g_A Cupin 2 conserved barrel domain protein; MCSG, PSI-biology, structural genomics, GEBA, midwest center structural genomics; HET: MSE; 1.86A {Sphaerobacter thermophilus}
Probab=74.19 E-value=23 Score=26.19 Aligned_cols=78 Identities=15% Similarity=0.171 Sum_probs=48.9
Q ss_pred cceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEEeCcEEEEEeCCCCeechhhhhcccCCCceeeEEEecce-EEEEEE--
Q psy9025 139 LRPVLYLPGDYICRKGEVGKEMYIVKTGQVQVVSGETVLATLTEGSVFGEISLLALAGTNRRTADVRSHGF-SNLFVL-- 215 (361)
Q Consensus 139 l~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~~~~~~~~l~~Gd~fGe~~ll~~~~~~~~~~~v~A~~~-~~~~~l-- 215 (361)
+....+.+|..+-.--.....+++|++|.+.+.-++.. ..+.+||++=..+ +.+ ..+.+.++ +.++.+
T Consensus 43 ~~~~~~~pg~~~~~H~H~~~e~~~vl~G~~~~~~~~~~-~~l~~Gd~~~ip~------~~~--H~~~~~~~~~~~l~v~~ 113 (126)
T 4e2g_A 43 LNWVRIEPNTEMPAHEHPHEQAGVMLEGTLELTIGEET-RVLRPGMAYTIPG------GVR--HRARTFEDGCLVLDIFS 113 (126)
T ss_dssp EEEEEECTTCEEEEECCSSEEEEEEEEECEEEEETTEE-EEECTTEEEEECT------TCC--EEEECCTTCEEEEEEEE
T ss_pred EEEEEECCCCcCCCccCCCceEEEEEEeEEEEEECCEE-EEeCCCCEEEECC------CCc--EEeEECCCCEEEEEEEC
Confidence 44567788887755444568899999999999855543 6789999763322 222 33444454 554433
Q ss_pred -eHHHHHHHHH
Q psy9025 216 -NKDDLNEAIE 225 (361)
Q Consensus 216 -~~~~f~~ll~ 225 (361)
++++|...+.
T Consensus 114 p~~~d~~~~~~ 124 (126)
T 4e2g_A 114 PPREDYARMAE 124 (126)
T ss_dssp SCCHHHHHHHH
T ss_pred CCCcchhhhhc
Confidence 3456655443
No 107
>2gu9_A Tetracenomycin polyketide synthesis protein; X-RAY diffraction, cupin, immune system; 1.40A {Xanthomonas campestris} PDB: 2ilb_A 3h50_A
Probab=73.66 E-value=17 Score=26.00 Aligned_cols=48 Identities=17% Similarity=0.231 Sum_probs=34.6
Q ss_pred cceEEeCCCCEEEeC--CCC-CCeEEEEEeeEEEEEeCcEEEEEeCCCCeec
Q psy9025 139 LRPVLYLPGDYICRK--GEV-GKEMYIVKTGQVQVVSGETVLATLTEGSVFG 187 (361)
Q Consensus 139 l~~~~~~~ge~I~~~--G~~-~~~ly~I~~G~v~v~~~~~~~~~l~~Gd~fG 187 (361)
+....+.+|..+-.. -.. ...+++|++|.+.+.-++. ...+.+||++=
T Consensus 23 ~~~~~~~pg~~~~~h~~~H~~~~e~~~vl~G~~~~~~~~~-~~~l~~Gd~~~ 73 (113)
T 2gu9_A 23 AAEMVIAPGDREGGPDNRHRGADQWLFVVDGAGEAIVDGH-TQALQAGSLIA 73 (113)
T ss_dssp EEEEEECTTCEEECCCSSSCCCEEEEEEEECCEEEEETTE-EEEECTTEEEE
T ss_pred EEEEEECCCCccCCcccccCCCcEEEEEEeCEEEEEECCE-EEEeCCCCEEE
Confidence 345567888876544 334 6789999999999985543 35789998773
No 108
>1v70_A Probable antibiotics synthesis protein; structural genomics, thermus thermophilus HB8, riken structu genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: b.82.1.9 PDB: 2dct_A
Probab=73.37 E-value=20 Score=25.10 Aligned_cols=47 Identities=26% Similarity=0.256 Sum_probs=33.2
Q ss_pred cceEEeCCCCEEEeCCCC-CCeEEEEEeeEEEEEeCcEEEEEeCCCCee
Q psy9025 139 LRPVLYLPGDYICRKGEV-GKEMYIVKTGQVQVVSGETVLATLTEGSVF 186 (361)
Q Consensus 139 l~~~~~~~ge~I~~~G~~-~~~ly~I~~G~v~v~~~~~~~~~l~~Gd~f 186 (361)
+....+.+|..+-.--.. .+.+++|.+|.+.+.-++. ...+.+||++
T Consensus 30 ~~~~~~~pg~~~~~H~H~~~~e~~~v~~G~~~~~~~~~-~~~l~~Gd~~ 77 (105)
T 1v70_A 30 YDLYALLPGQAQKVHVHEGSDKVYYALEGEVVVRVGEE-EALLAPGMAA 77 (105)
T ss_dssp EEEEEECTTCEEEEECCSSCEEEEEEEESCEEEEETTE-EEEECTTCEE
T ss_pred EEEEEECCCCcCCccCCCCCcEEEEEEeCEEEEEECCE-EEEeCCCCEE
Confidence 345567888876443333 3579999999999885543 4678999977
No 109
>3kgz_A Cupin 2 conserved barrel domain protein; metalloprotein, structural genomics, PSI-2, protein structur initiative; 1.85A {Rhodopseudomonas palustris}
Probab=73.32 E-value=14 Score=29.27 Aligned_cols=87 Identities=10% Similarity=0.103 Sum_probs=49.0
Q ss_pred eEEeCCCCEEEeCCCCCCeEEEEEeeEEEEEeCcEEEEEeCCCCeechhhhhcccCCCceeeEEEecceEEEEEE-----
Q psy9025 141 PVLYLPGDYICRKGEVGKEMYIVKTGQVQVVSGETVLATLTEGSVFGEISLLALAGTNRRTADVRSHGFSNLFVL----- 215 (361)
Q Consensus 141 ~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~~~~~~~~l~~Gd~fGe~~ll~~~~~~~~~~~v~A~~~~~~~~l----- 215 (361)
...+.||..+-..--....+++|++|.+.+.-++. ...+.+||++=..+ +.+........+++.++.+
T Consensus 48 ~~~l~pG~~~~~H~H~~~E~~~Vl~G~~~v~v~g~-~~~l~~Gd~i~ip~------~~~H~~~n~g~~~~~~l~i~~~~~ 120 (156)
T 3kgz_A 48 YFEVDEGGYSTLERHAHVHAVMIHRGHGQCLVGET-ISDVAQGDLVFIPP------MTWHQFRANRGDCLGFLCVVNAAR 120 (156)
T ss_dssp EEEEEEEEECCCBBCSSCEEEEEEEEEEEEEETTE-EEEEETTCEEEECT------TCCEEEECCSSSCEEEEEEEESSC
T ss_pred EEEECCCCccCceeCCCcEEEEEEeCEEEEEECCE-EEEeCCCCEEEECC------CCcEEeEeCCCCCEEEEEEEeCCC
Confidence 33456666544333445679999999999985544 45788998773221 3333332222334443333
Q ss_pred -----eHHHHHHHHHHCHHHHHHH
Q psy9025 216 -----NKDDLNEAIEYYPNAQEVL 234 (361)
Q Consensus 216 -----~~~~f~~ll~~~p~~~~~~ 234 (361)
+.......+..+|.++.++
T Consensus 121 d~p~~~~~~~l~~L~~~~~~~~~~ 144 (156)
T 3kgz_A 121 DRPQLPTADDLAELRKDERIADFI 144 (156)
T ss_dssp CCCBCCCHHHHHHHHTSHHHHHHC
T ss_pred CcccCCCHHHHHHHHhCcchhhhh
Confidence 2334444566777776654
No 110
>1o5u_A Novel thermotoga maritima enzyme TM1112; cupin, structural genomics center for structural genomics, JCSG, protein structure INI PSI; 1.83A {Thermotoga maritima} SCOP: b.82.1.8 PDB: 1lkn_A 2k9z_A
Probab=73.06 E-value=8.3 Score=28.05 Aligned_cols=48 Identities=10% Similarity=0.023 Sum_probs=34.8
Q ss_pred cceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEEeCcEEEEEeCCCCeech
Q psy9025 139 LRPVLYLPGDYICRKGEVGKEMYIVKTGQVQVVSGETVLATLTEGSVFGE 188 (361)
Q Consensus 139 l~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~~~~~~~~l~~Gd~fGe 188 (361)
+-...+.+|..-.. -+...+++|++|.+.+.-++.....+.+||.+=.
T Consensus 33 ~~~~~~~pg~~~~h--H~~~E~~~Vl~G~~~~~i~~g~~~~l~~GD~i~i 80 (101)
T 1o5u_A 33 WPIWEKEVSEFDWY--YDTNETCYILEGKVEVTTEDGKKYVIEKGDLVTF 80 (101)
T ss_dssp SCEEEECSEEEEEE--CSSCEEEEEEEEEEEEEETTCCEEEEETTCEEEE
T ss_pred EEEEEeCCCccccc--CCceEEEEEEeCEEEEEECCCCEEEECCCCEEEE
Confidence 34667788876544 4468999999999999855223467999998743
No 111
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=72.67 E-value=0.23 Score=45.75 Aligned_cols=59 Identities=10% Similarity=-0.036 Sum_probs=42.1
Q ss_pred ccCcccccCcccc----cccccccccccCchhhhh-------hhc-cCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLH-QTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~-~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
..|-.++..+.++ +...+.+...+|+.++.| .+. +.. +++.- ...++.|++|||++||+
T Consensus 63 ~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~--l~~~~~~~i~~qi~~aL~~LH~~giv 137 (361)
T 2yab_A 63 EREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKES--LSEEEATSFIKQILDGVNYLHTKKIA 137 (361)
T ss_dssp HHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHTTCSC--CBHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHhCCCcCCCcEEEEEEeCCEEEEEEEcCCCCcHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 5667777777776 445777788888888776 222 122 44442 88999999999999986
No 112
>2f4p_A Hypothetical protein TM1010; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: UNL; 1.90A {Thermotoga maritima} SCOP: b.82.1.9
Probab=71.11 E-value=12 Score=29.11 Aligned_cols=70 Identities=14% Similarity=0.083 Sum_probs=42.4
Q ss_pred ceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEEeCcEEEEEeCCCCeechhhhhcccCCCceeeEEEecceEEEEEE
Q psy9025 140 RPVLYLPGDYICRKGEVGKEMYIVKTGQVQVVSGETVLATLTEGSVFGEISLLALAGTNRRTADVRSHGFSNLFVL 215 (361)
Q Consensus 140 ~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~~~~~~~~l~~Gd~fGe~~ll~~~~~~~~~~~v~A~~~~~~~~l 215 (361)
....+.+|..+-.---....+++|++|.+.+.-++.....+.+||++=..+ +.+........+++.++.+
T Consensus 51 ~~~~~~pg~~~~~H~H~~~E~~~Vl~G~~~~~~~~~~~~~l~~Gd~i~ip~------~~~H~~~n~~~~~~~~l~v 120 (147)
T 2f4p_A 51 YDVVFEPGARTHWHSHPGGQILIVTRGKGFYQERGKPARILKKGDVVEIPP------NVVHWHGAAPDEELVHIGI 120 (147)
T ss_dssp EEEEECTTCEECSEECTTCEEEEEEEEEEEEEETTSCCEEEETTCEEEECT------TCCEEEEEBTTBCEEEEEE
T ss_pred EEEEECCCCccCceECCCceEEEEEeCEEEEEECCEEEEEECCCCEEEECC------CCcEEeEeCCCCCEEEEEE
Confidence 355677887664333345789999999999985444335788999773322 3444333333344555544
No 113
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=71.10 E-value=0.27 Score=44.27 Aligned_cols=61 Identities=13% Similarity=0.110 Sum_probs=42.7
Q ss_pred ccCcccccCcccc----cccccccccccCchhhhh-------hhcc-CCC--------------CCCCC----ccceeeh
Q psy9025 299 CGSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQ-TPT--------------GHNNS----FECQVTV 348 (361)
Q Consensus 299 ~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~-~~~--------------~~~~~----~~a~v~~ 348 (361)
..|-.+|.++++| ++..+.+...+++.+|.| ++.. .+. .+++. ++..++.
T Consensus 77 ~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~ 156 (308)
T 4gt4_A 77 RHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAA 156 (308)
T ss_dssp HHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCCCcceEEEECCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHH
Confidence 5677888888888 455777777788888877 2321 110 12222 2788999
Q ss_pred hhhhhhhcccc
Q psy9025 349 HREDIHESHIT 359 (361)
Q Consensus 349 a~~~lH~~~i~ 359 (361)
|++|||++|||
T Consensus 157 gl~yLH~~~ii 167 (308)
T 4gt4_A 157 GMEYLSSHHVV 167 (308)
T ss_dssp HHHHHHHTTCC
T ss_pred HHHHHHhCCCC
Confidence 99999999997
No 114
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=71.01 E-value=0.22 Score=44.90 Aligned_cols=59 Identities=5% Similarity=0.040 Sum_probs=39.4
Q ss_pred ccCcccccCcccc----cccccccccccCchhhhh-------hh-ccCCCCCCCC----ccceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LL-HQTPTGHNNS----FECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~-~~~~~~~~~~----~~a~v~~a~~~lH~~~i~ 359 (361)
..|..++..+.++ +...+.+...+|+.++.| .+ .... +++. +.+.++.|+.|||++||+
T Consensus 69 ~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~qi~~al~~lH~~~iv 143 (327)
T 3a62_A 69 KAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGI--FMEDTACFYLAEISMALGHLHQKGII 143 (327)
T ss_dssp --HHHHHHHCCCTTBCCEEEEEECSSCEEEEEECCTTEEHHHHHHHHSS--CCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHhCCCCCccceeEEEEcCCEEEEEEeCCCCCcHHHHHHhCCC--CCHHHHHHHHHHHHHHHHHHHhCCEE
Confidence 4566666666666 344677777788887766 12 2222 4444 278999999999999997
No 115
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=71.00 E-value=0.98 Score=40.03 Aligned_cols=61 Identities=3% Similarity=-0.077 Sum_probs=40.5
Q ss_pred ccCcccccCcccc----cccccccccccCchhhhh-------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
..|-.++..++++ +...+.+...+++.++.| ++......+++.. +.+++.|+.|||++||+
T Consensus 77 ~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~ 152 (319)
T 2y4i_B 77 KREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGIL 152 (319)
T ss_dssp CTTGGGGTTCCCTTBCCCCEEEECSSCEEEECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHhcCCCCCEeEEEEEEecCCceEEEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 4566777777766 334556666677777665 3332222255542 88999999999999987
No 116
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=70.71 E-value=0.13 Score=49.31 Aligned_cols=59 Identities=7% Similarity=-0.113 Sum_probs=41.8
Q ss_pred ccCcccccCcccc----cccccccccccCchhhhh-------hhc-cCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLH-QTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~-~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
..|-.+++.++++ ++..+.+...+|+.++.| .+. +.+ +++.. ..+++.|++|||++||+
T Consensus 64 ~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~--l~~~~~~~i~~qi~~aL~~LH~~giv 138 (476)
T 2y94_A 64 RREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGR--LDEKESRRLFQQILSGVDYCHRHMVV 138 (476)
T ss_dssp HHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCSSEEHHHHTTSSSS--CCHHHHHHHHHHHHHHHHHHHTTTEE
T ss_pred HHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCCCcHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 5677777777777 445666777788888776 222 122 55542 88999999999999986
No 117
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=70.68 E-value=0.12 Score=46.71 Aligned_cols=59 Identities=12% Similarity=0.013 Sum_probs=40.1
Q ss_pred ccCcccccCcccc----cccccccccccCchhhhh------hhc-cCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRPHRR----VNRSASADTYFHPKQQRR------LLH-QTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~------~~~-~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
..|..++..++++ +...+.+...+++.++.| ++. ... +++.. ..+++.|+.|||++||+
T Consensus 81 ~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~--~~~~~~~~i~~ql~~~l~~LH~~~iv 154 (329)
T 3gbz_A 81 IREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAENDLKKYMDKNPD--VSMRVIKSFLYQLINGVNFCHSRRCL 154 (329)
T ss_dssp HHHHHHGGGCCCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHCTT--CCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHcCCCCcceEEEEEecCCEEEEEEecCCCCHHHHHhhcCC--CCHHHHHHHHHHHHHHHHHHHhCCEE
Confidence 3456667776666 344666777777777766 222 222 44442 88999999999999997
No 118
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=70.08 E-value=0.15 Score=46.56 Aligned_cols=59 Identities=12% Similarity=-0.039 Sum_probs=40.3
Q ss_pred ccCcccccCcccc----cccccccccccCchhhhh-------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
..|-.+++.++++ +...+.+...+++.++.| +..+.+ +++.- ...++.|+.|||++||+
T Consensus 57 ~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~~g~l~~~l~~~~~--l~~~~~~~i~~qi~~aL~~LH~~giv 130 (336)
T 3h4j_B 57 EREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYAGGELFDYIVEKKR--MTEDEGRRFFQQIICAIEYCHRHKIV 130 (336)
T ss_dssp HHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCCEEHHHHHHHHCS--CCHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEECCCCcHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCeE
Confidence 4566677777776 444666666677777665 233233 55542 88999999999999997
No 119
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=70.02 E-value=25 Score=29.46 Aligned_cols=68 Identities=9% Similarity=0.091 Sum_probs=48.1
Q ss_pred cceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEEeCcEEEEEeCCCCeechhhhhcccCCCceeeEEEe-cceEEEEEE
Q psy9025 139 LRPVLYLPGDYICRKGEVGKEMYIVKTGQVQVVSGETVLATLTEGSVFGEISLLALAGTNRRTADVRS-HGFSNLFVL 215 (361)
Q Consensus 139 l~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~~~~~~~~l~~Gd~fGe~~ll~~~~~~~~~~~v~A-~~~~~~~~l 215 (361)
+....+.+|..+-..-.+.+.+++|++|.+.+.-++. ...+.+||++=..+ .....+.+ .+++.++.+
T Consensus 155 ~~~~~~~~G~~~~~H~H~~~e~~~Vl~G~~~~~i~g~-~~~l~~Gd~i~ip~--------~~~H~~~~~~~~~~~ll~ 223 (227)
T 3rns_A 155 MTIMSFWKGESLDPHKAPGDALVTVLDGEGKYYVDGK-PFIVKKGESAVLPA--------NIPHAVEAETENFKMLLI 223 (227)
T ss_dssp EEEEEECTTCEEEEECCSSEEEEEEEEEEEEEEETTE-EEEEETTEEEEECT--------TSCEEEECCSSCEEEEEE
T ss_pred EEEEEECCCCccCCEECCCcEEEEEEeEEEEEEECCE-EEEECCCCEEEECC--------CCcEEEEeCCCCEEEEEE
Confidence 4567789999887655567789999999999985554 46789999763322 23345666 777766543
No 120
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=69.35 E-value=0.29 Score=44.91 Aligned_cols=59 Identities=7% Similarity=0.004 Sum_probs=40.3
Q ss_pred ccCcccccCcccc----cccccccccccCchhhhh--------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRPHRR----VNRSASADTYFHPKQQRR--------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~--------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
..|..++..++++ +...+.+..+.|+.++.| +..+.. +++.- ..+++.|+.|||++||+
T Consensus 76 ~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~--~~~~~~~~~~~qi~~al~~lH~~~iv 150 (362)
T 2bdw_A 76 EREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREF--YSEADASHCIQQILESIAYCHSNGIV 150 (362)
T ss_dssp HHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHTTCSC--CCHHHHHHHHHHHHHHHHHHHHTTCB
T ss_pred HHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCCCHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCeE
Confidence 4566666666666 445677778888888776 122122 44442 78899999999999997
No 121
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=68.13 E-value=0.15 Score=49.03 Aligned_cols=59 Identities=12% Similarity=0.046 Sum_probs=42.1
Q ss_pred ccCcccccCcccc----cccccccccccCchhhhh--------hhccCCCCCCCC----ccceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRPHRR----VNRSASADTYFHPKQQRR--------LLHQTPTGHNNS----FECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~--------~~~~~~~~~~~~----~~a~v~~a~~~lH~~~i~ 359 (361)
..|-.++..++++ +...+.+...+|+.++.| +.+..+ +++. +..+++.|+.|||++||+
T Consensus 84 ~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~--~~~~~~~~i~~qi~~~l~~lH~~~iv 158 (494)
T 3lij_A 84 LEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMK--FNEVDAAVIIKQVLSGVTYLHKHNIV 158 (494)
T ss_dssp HHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSS--CCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCCcHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCce
Confidence 4567777777777 445777777888888776 223223 5544 278899999999999986
No 122
>2pyt_A Ethanolamine utilization protein EUTQ; structural genomics, joint center for structural genomics, J protein structure initiative; 1.90A {Salmonella typhimurium LT2} SCOP: b.82.1.24
Probab=68.07 E-value=23 Score=27.09 Aligned_cols=46 Identities=13% Similarity=0.011 Sum_probs=32.4
Q ss_pred eEEeCCCCEEEeCCCCCCeEEEEEeeEEEEEeCcEEEEEeCCCCeechh
Q psy9025 141 PVLYLPGDYICRKGEVGKEMYIVKTGQVQVVSGETVLATLTEGSVFGEI 189 (361)
Q Consensus 141 ~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~~~~~~~~l~~Gd~fGe~ 189 (361)
...+.||..-.. ...+.+++|++|.+.+.-++.. ..+++||.|-..
T Consensus 61 ~~~~~pG~~~~h--~~~~E~~~VLeG~~~l~~~g~~-~~l~~GD~i~~p 106 (133)
T 2pyt_A 61 FMQWDNAFFPWT--LNYDEIDMVLEGELHVRHEGET-MIAKAGDVMFIP 106 (133)
T ss_dssp EEEEEEEEEEEE--CSSEEEEEEEEEEEEEEETTEE-EEEETTCEEEEC
T ss_pred EEEECCCCcccc--CCCCEEEEEEECEEEEEECCEE-EEECCCcEEEEC
Confidence 445677743222 2467999999999999866544 379999988543
No 123
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=68.01 E-value=0.16 Score=44.38 Aligned_cols=61 Identities=8% Similarity=-0.017 Sum_probs=39.7
Q ss_pred ccCcccccCcccc----cccccccccccCchhhhh-------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
..|-.++..++++ +...+.+..+.++.++.| .+......+++.. ...++.|+.|||++||+
T Consensus 59 ~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~ 134 (278)
T 3cok_A 59 QNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGIL 134 (278)
T ss_dssp HHHHHHHTTBCCTTBCCEEEEEECSSEEEEEEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHhCCCCCeEeEEEEEccCCeEEEEEecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 4555666666666 334666777777777766 2332211244442 88999999999999986
No 124
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=67.96 E-value=0.13 Score=49.28 Aligned_cols=59 Identities=12% Similarity=0.022 Sum_probs=41.8
Q ss_pred ccCcccccCcccc----cccccccccccCchhhhh--------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRPHRR----VNRSASADTYFHPKQQRR--------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~--------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
..|-.++..++++ +...+.+...+|+.++.| +..... +++.- ...++.|+.|||++||+
T Consensus 69 ~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~--~~~~~~~~i~~qi~~al~~lH~~~iv 143 (486)
T 3mwu_A 69 LREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKR--FSEHDAARIIKQVFSGITYMHKHNIV 143 (486)
T ss_dssp HHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSS--CCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEEcCCCCcHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCeE
Confidence 4567777777777 445677777777777766 222223 55542 78899999999999997
No 125
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=67.42 E-value=0.13 Score=44.90 Aligned_cols=59 Identities=8% Similarity=-0.052 Sum_probs=37.7
Q ss_pred ccCcccccCcccc----cccccccccccCchhhhh-------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
..|-.++..++++ +...+.+....++.++.| +..... +++.. ...++.|+.|||++||+
T Consensus 61 ~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~--~~~~~~~~~~~~i~~~l~~LH~~~i~ 134 (275)
T 2eue_A 61 EREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDK--MSEQEARRFFQQIISAVEYCHRHKIV 134 (275)
T ss_dssp HHHHHHHHHCCCTTBCCEEEEEECSSCEEEEEECCCEEHHHHHHTSSS--CCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHhCCCCCeEEEEEEEecCCeEEEEehhcCCcHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCCe
Confidence 3445555555555 334566666677777665 222222 44442 88899999999999986
No 126
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=67.27 E-value=0.11 Score=48.12 Aligned_cols=61 Identities=16% Similarity=0.020 Sum_probs=41.1
Q ss_pred ccCcccccCcccc----cccccccccccCchhhhh-------hhccC-CCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQT-PTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~~-~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
..|..+++.++++ +...+.+...+|+.++.| ++... ...+++.. ...++.|+.|||++||+
T Consensus 74 ~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~iv 150 (389)
T 3gni_B 74 QGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYV 150 (389)
T ss_dssp HHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHhCCCCCCCcEeEEEEECCEEEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 4567777777776 344677777777777765 22211 12255542 77899999999999986
No 127
>2bnm_A Epoxidase; oxidoreductase, cupin, HTH, cation-dependant, zinc, fosfomycin; 1.7A {Streptomyces wedmorensis} SCOP: a.35.1.3 b.82.1.10 PDB: 1zz7_A 1zz8_A 1zz9_A 1zzb_A 1zz6_A 1zzc_A 2bnn_A 2bno_A 3scf_A 3scg_A 3sch_A
Probab=67.16 E-value=13 Score=30.28 Aligned_cols=67 Identities=19% Similarity=0.214 Sum_probs=40.8
Q ss_pred eEEeCCCCEEE---eCCCCCCeEEEEEeeEEEEEeCc---EEEEEeCCCCeechhhhhcccCCCceeeEEEec---ceEE
Q psy9025 141 PVLYLPGDYIC---RKGEVGKEMYIVKTGQVQVVSGE---TVLATLTEGSVFGEISLLALAGTNRRTADVRSH---GFSN 211 (361)
Q Consensus 141 ~~~~~~ge~I~---~~G~~~~~ly~I~~G~v~v~~~~---~~~~~l~~Gd~fGe~~ll~~~~~~~~~~~v~A~---~~~~ 211 (361)
...+.||...- .-..++..+++|++|.+.+.-++ .....+.+||++=..+ +.+. .+.+. +++.
T Consensus 121 ~~~~~pg~~~~~~~~h~h~~~E~~~Vl~G~~~~~~~~~~~~~~~~l~~GD~~~~~~------~~~H--~~~n~~~~~~~~ 192 (198)
T 2bnm_A 121 VVDVLTDNPDDAKFNSGHAGNEFLFVLEGEIHMKWGDKENPKEALLPTGASMFVEE------HVPH--AFTAAKGTGSAK 192 (198)
T ss_dssp EEEECCCCGGGCCCCCCCSSCEEEEEEESCEEEEESCTTSCEEEEECTTCEEEECT------TCCE--EEEESTTSCCEE
T ss_pred EEEEcCCCCCcccccccCCCeEEEEEEeeeEEEEECCcCCcccEEECCCCEEEeCC------CCce--EEEecCCCCCeE
Confidence 34566776543 12234478999999999998443 1456899999873322 3333 34444 5566
Q ss_pred EEEE
Q psy9025 212 LFVL 215 (361)
Q Consensus 212 ~~~l 215 (361)
++.+
T Consensus 193 ~l~v 196 (198)
T 2bnm_A 193 LIAV 196 (198)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6654
No 128
>2b8m_A Hypothetical protein MJ0764; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.70A {Methanocaldococcus jannaschii} SCOP: b.82.1.18
Probab=66.68 E-value=9.8 Score=27.96 Aligned_cols=46 Identities=11% Similarity=0.194 Sum_probs=30.5
Q ss_pred eEEeCCCCEEEeCCCCCCeEEEEEeeEEEEEeCcEEEEEeCCCCee
Q psy9025 141 PVLYLPGDYICRKGEVGKEMYIVKTGQVQVVSGETVLATLTEGSVF 186 (361)
Q Consensus 141 ~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~~~~~~~~l~~Gd~f 186 (361)
...+.+|..+-.--.....+++|++|.+.+.-++.....+.+||++
T Consensus 31 ~~~~~pg~~~~~H~H~~~e~~~Vl~G~~~~~i~~~~~~~l~~Gd~i 76 (117)
T 2b8m_A 31 HIVLPRGEQMPKHYSNSYVHLIIIKGEMTLTLEDQEPHNYKEGNIV 76 (117)
T ss_dssp EEEEETTCBCCCEECSSCEEEEEEESEEEEEETTSCCEEEETTCEE
T ss_pred EEEECCCCcCCCEeCCCcEEEEEEeCEEEEEECCEEEEEeCCCCEE
Confidence 3445666654222234567999999999998555444478899876
No 129
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=66.39 E-value=0.31 Score=44.34 Aligned_cols=46 Identities=13% Similarity=0.096 Sum_probs=33.9
Q ss_pred cccccccccccCchhhhh--------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 312 VNRSASADTYFHPKQQRR--------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 312 ~~~t~~d~~~~~~l~~~~--------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
+...+.+..++|+.++.| +.+... +++.- ..+++.|++|||++||+
T Consensus 81 ~~~~~~~~~~~~lv~E~~~gg~L~~~i~~~~~--~~~~~~~~~~~qi~~al~~lH~~giv 138 (342)
T 2qr7_A 81 LKDVYDDGKYVYVVTELMKGGELLDKILRQKF--FSEREASAVLFTITKTVEYLHAQGVV 138 (342)
T ss_dssp EEEEEECSSEEEEEECCCCSCBHHHHHHTCTT--CCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred EEEEEEcCCEEEEEEeCCCCCcHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCcE
Confidence 445778888888888877 223222 55542 88999999999999986
No 130
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=65.65 E-value=0.16 Score=48.20 Aligned_cols=60 Identities=13% Similarity=0.022 Sum_probs=38.6
Q ss_pred ccCcccccCcccc----ccccc-----ccccccCchhhhh------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRPHRR----VNRSA-----SADTYFHPKQQRR------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~~~----~~~t~-----~d~~~~~~l~~~~------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
..|..++..++++ +...+ .+...+|+.++.| ++. ....+++.. ..+++.|+.|||+.||+
T Consensus 100 ~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~-~~~~l~~~~~~~~~~qi~~aL~~LH~~~ii 178 (458)
T 3rp9_A 100 LREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFR-TPVYLTELHIKTLLYNLLVGVKYVHSAGIL 178 (458)
T ss_dssp HHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEECCCSEEHHHHHH-SSCCCCHHHHHHHHHHHHHHHHHHHHTTCB
T ss_pred HHHHHHHHhCCCCCCCceEEEEecCCcccCceEEEEEeccccchhhhcc-cCCCCCHHHHHHHHHHHHHHHHHHHhCCcC
Confidence 4566777777766 22222 3445677777655 233 122255552 88999999999999997
No 131
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=65.64 E-value=28 Score=29.61 Aligned_cols=69 Identities=10% Similarity=0.066 Sum_probs=45.3
Q ss_pred hcceEEeCCCCEEEe-CCCCCCeEEEEEeeEEEEEeCcEEEEEeCCCCeechhhhhcccCCCceeeEEEecceEEEE
Q psy9025 138 KLRPVLYLPGDYICR-KGEVGKEMYIVKTGQVQVVSGETVLATLTEGSVFGEISLLALAGTNRRTADVRSHGFSNLF 213 (361)
Q Consensus 138 ~l~~~~~~~ge~I~~-~G~~~~~ly~I~~G~v~v~~~~~~~~~l~~Gd~fGe~~ll~~~~~~~~~~~v~A~~~~~~~ 213 (361)
.+....++||..+-. .-......++|++|+..+.-++.. ..+.+||++-..+ +.+........+++..+
T Consensus 166 ~~~~~tl~PG~~~~~~~~h~~ee~~~vLeG~~~~~~~~~~-~~l~~GD~~~~~~------~~pH~~~n~g~~~~~yl 235 (246)
T 1sfn_A 166 MVSTMSFAPGASLPYAEVHYMEHGLLMLEGEGLYKLEENY-YPVTAGDIIWMGA------HCPQWYGALGRNWSKYL 235 (246)
T ss_dssp EEEEEEECTTCBCSSCBCCSSCEEEEEEECEEEEEETTEE-EEEETTCEEEECT------TCCEEEEEESSSCEEEE
T ss_pred EEEEEEECCCCccCcccCCCceEEEEEEECEEEEEECCEE-EEcCCCCEEEECC------CCCEEEEcCCCCCEEEE
Confidence 356778899987753 344567899999999999865544 4799999874332 33444344444445443
No 132
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=65.53 E-value=0.51 Score=42.39 Aligned_cols=61 Identities=5% Similarity=-0.111 Sum_probs=40.2
Q ss_pred ccCcccccCcccc----cccccccccccCchhhhh-------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
..|-.++..++++ +...+.+....|+.++.| +++.....+++.. +..++.|+.|||++||+
T Consensus 98 ~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~iv 173 (325)
T 3kul_A 98 LSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYV 173 (325)
T ss_dssp HHHHHHHTTCCCTTBCCEEEEECGGGCCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHhCCCCCCCcEEEEEEeCCccEEEeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 4466666666666 344667777777777766 2332221244442 78899999999999986
No 133
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=65.53 E-value=0.47 Score=44.06 Aligned_cols=60 Identities=10% Similarity=-0.011 Sum_probs=38.3
Q ss_pred cCcccccCcccc----cccccccccccCchhhhh-------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 300 GSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 300 ~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
.|-.++..+.++ +...+.+...+++.++.| .+......+++.. ...++.|+.|||++||+
T Consensus 97 ~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~giv 171 (387)
T 1kob_A 97 NEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIV 171 (387)
T ss_dssp HHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 455555555555 344666677777777766 2221221255442 78999999999999986
No 134
>2vpv_A Protein MIF2, MIF2P; nucleus, mitosis, centromere, cell cycle, DNA-binding, kinetochore, cell division, phosphoprotein, jelly-roll fold; 2.7A {Saccharomyces cerevisiae}
Probab=65.49 E-value=15 Score=29.45 Aligned_cols=67 Identities=15% Similarity=0.080 Sum_probs=39.6
Q ss_pred EEeCC-CCE-EEeCCCCCCeEEEEEeeEEEEEeCcEEEEEeCCCCeechhhhhcccCCCceeeEEEecceEEEEEE
Q psy9025 142 VLYLP-GDY-ICRKGEVGKEMYIVKTGQVQVVSGETVLATLTEGSVFGEISLLALAGTNRRTADVRSHGFSNLFVL 215 (361)
Q Consensus 142 ~~~~~-ge~-I~~~G~~~~~ly~I~~G~v~v~~~~~~~~~l~~Gd~fGe~~ll~~~~~~~~~~~v~A~~~~~~~~l 215 (361)
..++| |.. =-.....+..++||++|.+.+.-++.. ..+.+||+|=..+ +.++...-...++|.++.+
T Consensus 93 v~lpP~G~~~~~~~~h~gEE~~yVLeG~v~vtl~g~~-~~L~~Gds~~iP~------g~~H~~~N~~d~~Arll~V 161 (166)
T 2vpv_A 93 LKLPAISGQKKLSNSFRTYITFHVIQGIVEVTVCKNK-FLSVKGSTFQIPA------FNEYAIANRGNDEAKMFFV 161 (166)
T ss_dssp EEECSSGGGCEEEECCSEEEEEEEEESEEEEEETTEE-EEEETTCEEEECT------TCEEEEEECSSSCEEEEEE
T ss_pred EEECCCCCCCCCccCCCceEEEEEEEeEEEEEECCEE-EEEcCCCEEEECC------CCCEEEEECCCCCEEEEEE
Confidence 45667 432 111223457899999999999965543 4799999874433 3333333333444555543
No 135
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=65.21 E-value=23 Score=30.10 Aligned_cols=48 Identities=8% Similarity=-0.018 Sum_probs=35.0
Q ss_pred eEEeCC-CCEEEeCCCCCCeEEEEEeeEEEEEeCcEEEEEeCCCCeechh
Q psy9025 141 PVLYLP-GDYICRKGEVGKEMYIVKTGQVQVVSGETVLATLTEGSVFGEI 189 (361)
Q Consensus 141 ~~~~~~-ge~I~~~G~~~~~ly~I~~G~v~v~~~~~~~~~l~~Gd~fGe~ 189 (361)
...+.| |..+-.---+...+++|++|.+.+.-++.. ..+.+||.+-..
T Consensus 149 ~~~~~p~g~~~~~H~H~~~e~~~Vl~G~~~~~i~~~~-~~l~~Gd~i~ip 197 (243)
T 3h7j_A 149 LAKIPGNGGEMPFHKHRNEQIGICIGGGYDMTVEGCT-VEMKFGTAYFCE 197 (243)
T ss_dssp EEEECTTTEEEEEECCSSEEEEEECSSCEEEEETTEE-EEECTTCEEEEC
T ss_pred EEEECCCCCcCCCEeCCCcEEEEEEECEEEEEECCEE-EEECCCCEEEEC
Confidence 445888 777655444567899999999999865543 459999987543
No 136
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=64.99 E-value=0.54 Score=40.70 Aligned_cols=61 Identities=5% Similarity=-0.121 Sum_probs=38.2
Q ss_pred ccCcccccCcccc----cccccccccccCchhhhh-------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
..|-.++..++++ +...+.+...+++.++.| ++......+++.. ..+++.|+.|||++||+
T Consensus 53 ~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~ 128 (269)
T 4hcu_A 53 IEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVI 128 (269)
T ss_dssp HHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 3455566665555 334566666666676655 2332222244442 78899999999999987
No 137
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=63.99 E-value=0.43 Score=45.22 Aligned_cols=59 Identities=7% Similarity=-0.078 Sum_probs=40.9
Q ss_pred ccCcccccCcccc----cccccccccccCchhhhh--------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRPHRR----VNRSASADTYFHPKQQRR--------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~--------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
..|-.++..++++ +...+.+...+|+.++.| +..+.. ++|.- ..+++.|+.|||++||+
T Consensus 58 ~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~E~~~gg~L~~~i~~~~~--~~e~~~~~i~~qil~aL~~lH~~giv 132 (444)
T 3soa_A 58 EREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREY--YSEADASHCIQQILEAVLHCHQMGVV 132 (444)
T ss_dssp HHHHHHHHHCCBTTBCCEEEEEECSSEEEEEECCCBCCBHHHHHHHCSC--CCHHHHHHHHHHHHHHHHHHHHTTCB
T ss_pred HHHHHHHHhCCCcCCCeEEEEEEECCEEEEEEEeCCCCCHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 3455666666666 445777778888887766 233223 55542 78899999999999997
No 138
>2k1e_A Water soluble analogue of potassium channel, KCSA; homotetramer, ION transport, ionic channel, membrane, transmembrane, transport; NMR {Escherichia coli} PDB: 2kb1_A
Probab=63.75 E-value=0.77 Score=33.86 Aligned_cols=38 Identities=18% Similarity=0.121 Sum_probs=30.9
Q ss_pred eecCCCCcccc---cceeecceeeeehhhHHHHHhhhhhhc
Q psy9025 3 IYPRNNETEAN---TWLRKESVPEQVRGDIESGVDEDEEYH 40 (361)
Q Consensus 3 ~~~~~~~~~~~---~~l~g~~vfayiiG~i~s~~~~~~~~~ 40 (361)
++|.+...+.. .+++|.+++++++|.+.+.+.+...+.
T Consensus 60 i~P~t~~gr~~~~~~~l~G~~~~~~~~~~i~~~~~~~~~~~ 100 (103)
T 2k1e_A 60 RYPVTEEGRKVAEQVMKAGIEVFALVTAALATDFVRREEER 100 (103)
T ss_dssp SCCCSSSCTHHHHHHHHHHHHHHHHTHHHHHTTGGGHHHHT
T ss_pred CCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 57888887755 478999999999999999888766543
No 139
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=63.73 E-value=0.38 Score=43.29 Aligned_cols=61 Identities=13% Similarity=-0.022 Sum_probs=39.4
Q ss_pred ccCcccccCcccc----cccccccccccCchhhhh-------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
..|-.++..++++ +...+.+...+|+.++.| .+......+++.. ..+++.|+.|||++||+
T Consensus 49 ~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~giv 124 (321)
T 1tki_A 49 KKEISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIG 124 (321)
T ss_dssp HHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 3455555555555 344666777777887776 2322211255542 78999999999999986
No 140
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=63.27 E-value=0.75 Score=42.31 Aligned_cols=61 Identities=5% Similarity=-0.048 Sum_probs=40.6
Q ss_pred ccCcccccCcccc----cccccccccccCchhhhh-------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
..|-.++..++++ +...+.+...+++.++.| ++++....+++.. +..++.|+.|||++||+
T Consensus 94 ~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~iv 169 (373)
T 2qol_A 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYV 169 (373)
T ss_dssp HHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHhCCCCCCCeEEEEEeeCCceEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 4566777777766 344666677777777766 3432221244432 78899999999999987
No 141
>2qjv_A Uncharacterized IOLB-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.90A {Salmonella typhimurium LT2}
Probab=63.23 E-value=33 Score=29.82 Aligned_cols=78 Identities=15% Similarity=0.188 Sum_probs=57.9
Q ss_pred HhcceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEEeCcEEEEEe-CCCCeechh---hhhcccCCCceeeEEEecceEEE
Q psy9025 137 LKLRPVLYLPGDYICRKGEVGKEMYIVKTGQVQVVSGETVLATL-TEGSVFGEI---SLLALAGTNRRTADVRSHGFSNL 212 (361)
Q Consensus 137 ~~l~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~~~~~~~~l-~~Gd~fGe~---~ll~~~~~~~~~~~v~A~~~~~~ 212 (361)
-.+....+.+|+.+-.+-+.-+...+++.|.+.+..+......+ ..-++|... ++.- ..-..+++.|.+++++
T Consensus 29 ~~f~~~~L~~Ge~~~~~~~~~E~~iv~l~G~~~V~~~g~~~~~~g~R~svF~~~~p~~lYv---p~g~~v~i~a~~~~~~ 105 (270)
T 2qjv_A 29 VGFDVWQLXAGESITLPSDERERCLVLVAGLASVXAADSFFYRIGQRMSPFERIPAYSVYL---PHHTEAXVTAETDLEL 105 (270)
T ss_dssp CEEEEEEECTTCEEEECCSSEEEEEEEEESCEEEEETTEEEEEECCCSSGGGCSCCCEEEE---CSSCCEEEEESSSEEE
T ss_pred eEEEEEEecCCCEEEecCCCcEEEEEEecceEEEEECCEEEeccccccccccCCCCcEEEE---CCCCEEEEEecCCceE
Confidence 34667888999998877666677888899999999776665554 456888764 3333 3344889999999999
Q ss_pred EEEeH
Q psy9025 213 FVLNK 217 (361)
Q Consensus 213 ~~l~~ 217 (361)
+..+.
T Consensus 106 ~v~sA 110 (270)
T 2qjv_A 106 AVCSA 110 (270)
T ss_dssp EEEEE
T ss_pred EEEee
Confidence 88764
No 142
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=63.19 E-value=0.41 Score=46.02 Aligned_cols=46 Identities=11% Similarity=0.082 Sum_probs=32.4
Q ss_pred cccccccccccCchhhhh--------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 312 VNRSASADTYFHPKQQRR--------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 312 ~~~t~~d~~~~~~l~~~~--------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
+...+.+..++|+.++.| +..... +++.- ..+++.|+.|||++||+
T Consensus 111 ~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~--~~~~~~~~i~~qi~~~l~~lH~~~iv 168 (504)
T 3q5i_A 111 LFDVFEDKKYFYLVTEFYEGGELFEQIINRHK--FDECDAANIMKQILSGICYLHKHNIV 168 (504)
T ss_dssp EEEEEECSSEEEEEEECCTTCBHHHHHHHHSC--CCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred EEEEEEcCCEEEEEEecCCCCcHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCeE
Confidence 444667777777777766 222223 55542 88999999999999986
No 143
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=62.86 E-value=0.41 Score=43.27 Aligned_cols=58 Identities=9% Similarity=-0.015 Sum_probs=37.7
Q ss_pred cCcccccCcccc----cccccccccccCchhhhh--------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 300 GSKSLNKRPHRR----VNRSASADTYFHPKQQRR--------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 300 ~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~--------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
.|-.+++.++++ +...+.+...+|+.++.| +....+ +++.. ..+++.|+.|||++||+
T Consensus 63 ~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--l~~~~~~~~~~qi~~al~~lH~~~iv 136 (328)
T 3fe3_A 63 REVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGR--MKEKEARSKFRQIVSAVQYCHQKRIV 136 (328)
T ss_dssp HHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHHHCC--CCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHhCCCCCEeeEEEEEEECCEEEEEEECCCCCcHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCEe
Confidence 455555555555 344556666677776655 222233 55542 88999999999999997
No 144
>3bcw_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.60A {Bordetella bronchiseptica RB50}
Probab=62.81 E-value=6.8 Score=29.74 Aligned_cols=47 Identities=13% Similarity=0.129 Sum_probs=31.5
Q ss_pred EEeCCCCEEEeCCCCCCeEEEEEeeEEEEEeCcEEEEEeCCCCeechh
Q psy9025 142 VLYLPGDYICRKGEVGKEMYIVKTGQVQVVSGETVLATLTEGSVFGEI 189 (361)
Q Consensus 142 ~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~~~~~~~~l~~Gd~fGe~ 189 (361)
....+|..-.... ..+.+++|++|.+.+.-.+.....+++||.+-..
T Consensus 54 w~~~pG~~~~~~~-~~~E~~~Vl~G~~~l~~~~g~~~~l~~GD~~~ip 100 (123)
T 3bcw_A 54 WESTSGSFQSNTT-GYIEYCHIIEGEARLVDPDGTVHAVKAGDAFIMP 100 (123)
T ss_dssp EEEEEEEEECCCT-TEEEEEEEEEEEEEEECTTCCEEEEETTCEEEEC
T ss_pred EEECCCceeeEcC-CCcEEEEEEEEEEEEEECCCeEEEECCCCEEEEC
Confidence 3445665544322 2379999999999998533334679999988543
No 145
>4b29_A Dimethylsulfoniopropionate lyase; hydrolase, dimethylsulfide, sulphur cycle; 1.72A {Roseovarius nubinhibens ism}
Probab=62.70 E-value=11 Score=31.79 Aligned_cols=43 Identities=19% Similarity=0.176 Sum_probs=30.1
Q ss_pred eCCCCEEEeCCCCCCeEEEEEeeEEEEEeCcEEEEEeCCCCee
Q psy9025 144 YLPGDYICRKGEVGKEMYIVKTGQVQVVSGETVLATLTEGSVF 186 (361)
Q Consensus 144 ~~~ge~I~~~G~~~~~ly~I~~G~v~v~~~~~~~~~l~~Gd~f 186 (361)
+.||...=.--.+.+.+|+|++|.++..-++.....+++||.+
T Consensus 139 l~PG~~yP~HsHp~EEiy~VLsG~~e~~v~~g~~~~l~pGd~v 181 (217)
T 4b29_A 139 WGPGLDYGWHEHLPEELYSVVSGRALFHLRNAPDLMLEPGQTR 181 (217)
T ss_dssp ECSSCEEEEEECSSEEEEEEEEECEEEEETTSCCEEECTTCEE
T ss_pred ECCCCcCCCCCCCCceEEEEEeCCEEEEECCCCEEecCCCCEE
Confidence 4444443333345789999999999987555556778999876
No 146
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=62.32 E-value=0.66 Score=41.57 Aligned_cols=60 Identities=13% Similarity=0.006 Sum_probs=38.2
Q ss_pred cCcccccCcccc----cccccccccccCchhhhh------hhccCCCCCCCC----ccceeehhhhhhhhcccc
Q psy9025 300 GSKSLNKRPHRR----VNRSASADTYFHPKQQRR------LLHQTPTGHNNS----FECQVTVHREDIHESHIT 359 (361)
Q Consensus 300 ~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~------~~~~~~~~~~~~----~~a~v~~a~~~lH~~~i~ 359 (361)
.|-.++..++++ +...+.+...+++.++.| .+......+++. +...++.|+.|||++||+
T Consensus 49 ~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~iv 122 (324)
T 3mtl_A 49 REVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVL 122 (324)
T ss_dssp CCHHHHSCCCCTTBCCEEEEEECSSCEEEEEECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 455566666655 344666677777777766 222122124443 277899999999999986
No 147
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=61.86 E-value=0.45 Score=41.64 Aligned_cols=60 Identities=10% Similarity=-0.007 Sum_probs=35.5
Q ss_pred cCcccccCcccc----cccccccccccCchhhhh-------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 300 GSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 300 ~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
.|-.++..++++ +...+.+....++.++.| ++......+++.. +..++.|+.|||++||+
T Consensus 61 ~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~iv 135 (289)
T 4fvq_A 61 EAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENTLI 135 (289)
T ss_dssp HHHHHHHTSCCTTBCCEEEEECCTTCCEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHhCCCCCEeEEEEEEEeCCCCEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhCCeE
Confidence 344445555554 333555555566666655 2332221144442 78899999999999987
No 148
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=61.84 E-value=0.77 Score=43.24 Aligned_cols=60 Identities=12% Similarity=0.021 Sum_probs=38.4
Q ss_pred cCcccccCc-ccc----cccccccccccCchhhhh------hhccCCCCCCCC----ccceeehhhhhhhhcccc
Q psy9025 300 GSKSLNKRP-HRR----VNRSASADTYFHPKQQRR------LLHQTPTGHNNS----FECQVTVHREDIHESHIT 359 (361)
Q Consensus 300 ~ek~i~~~~-~~~----~~~t~~d~~~~~~l~~~~------~~~~~~~~~~~~----~~a~v~~a~~~lH~~~i~ 359 (361)
.|..++..+ .++ +...+.+..++|+.++.| .+......+.+. +..+++.|+.|||++||+
T Consensus 66 ~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~iv 140 (432)
T 3p23_A 66 REVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIV 140 (432)
T ss_dssp HHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCCCCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHCcCE
Confidence 344455444 344 344677778888888877 233222223332 278899999999999997
No 149
>3i7d_A Sugar phosphate isomerase; YP_168127.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.30A {Ruegeria pomeroyi dss-3}
Probab=60.87 E-value=23 Score=28.02 Aligned_cols=49 Identities=16% Similarity=0.167 Sum_probs=33.4
Q ss_pred cceEEeCCCCEEE--eCCCCCCeEEEEEeeEEEEEeCcEEEEEeCCCCeech
Q psy9025 139 LRPVLYLPGDYIC--RKGEVGKEMYIVKTGQVQVVSGETVLATLTEGSVFGE 188 (361)
Q Consensus 139 l~~~~~~~ge~I~--~~G~~~~~ly~I~~G~v~v~~~~~~~~~l~~Gd~fGe 188 (361)
+....+.+|.... ..-...+.+++|++|.+.+.-++. ...+.+||++-.
T Consensus 45 ~~~~~l~pG~~~~~~H~H~~~eE~~~Vl~G~~~~~~~~~-~~~l~~GD~i~i 95 (163)
T 3i7d_A 45 VNLVRLEPGAKSSLRHYHMEQDEFVMVTEGALVLVDDQG-EHPMVPGDCAAF 95 (163)
T ss_dssp EEEEEECTTCBSSSSEEESSCCEEEEEEESCEEEEETTE-EEEECTTCEEEE
T ss_pred EEEEEECCCCcCCCCccCCCCcEEEEEEECEEEEEECCE-EEEeCCCCEEEE
Confidence 3356677777542 222223689999999999986554 467999998743
No 150
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=60.87 E-value=0.51 Score=43.07 Aligned_cols=59 Identities=7% Similarity=-0.058 Sum_probs=39.7
Q ss_pred ccCcccccCcccc----cccccccccccCchhhhh--------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRPHRR----VNRSASADTYFHPKQQRR--------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~--------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
..|-.+++.++++ +...+.+...+|+.++.| +..... +++.. ...++.|++|||++||+
T Consensus 56 ~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~--l~~~~~~~i~~qi~~aL~~LH~~giv 130 (347)
T 3zgw_A 56 KTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDR--LSEEETRVVFRQIVSAVAYVHSQGYA 130 (347)
T ss_dssp HHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSS--CCHHHHHHHHHHHHHHHHHHHHTTCB
T ss_pred HHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEEeCCCCCCHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCeE
Confidence 3455666666665 444666677777777766 222233 55542 88999999999999997
No 151
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=60.80 E-value=0.35 Score=42.89 Aligned_cols=59 Identities=7% Similarity=-0.054 Sum_probs=39.8
Q ss_pred ccCcccccCcccc----cccccccccccCchhhhh-------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
..|-.++..+.++ +...+.+...+++.++.| ++.+.. +++.. ...++.|+.|||++||+
T Consensus 65 ~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~qi~~~l~~lH~~~i~ 138 (297)
T 3fxz_A 65 INEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC--MDEGQIAAVCRECLQALEFLHSNQVI 138 (297)
T ss_dssp HHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHSC--CCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEECCCCCCHHHHHhhcC--CCHHHHHHHHHHHHHHHHHHHhCCce
Confidence 3455566666666 344666777777777766 334333 55542 78899999999999986
No 152
>1dgw_A Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_A 1cau_A 1cav_A 1caw_A 1cax_A
Probab=60.70 E-value=11 Score=30.38 Aligned_cols=50 Identities=14% Similarity=0.100 Sum_probs=36.3
Q ss_pred cceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEEe---CcEEEEEeCCCCeech
Q psy9025 139 LRPVLYLPGDYICRKGEVGKEMYIVKTGQVQVVS---GETVLATLTEGSVFGE 188 (361)
Q Consensus 139 l~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~---~~~~~~~l~~Gd~fGe 188 (361)
+....+.||......-..++.+++|++|.+.+.- +......+.+||++=-
T Consensus 43 ~~~~~l~pg~~~~pHh~~a~E~~yVl~G~~~v~v~~~~~~~~~~l~~GDv~~~ 95 (178)
T 1dgw_A 43 VLEYCSKPNTLLLPHHSDSDLLVLVLEGQAILVLVNPDGRDTYKLDQGDAIKI 95 (178)
T ss_dssp EEEEEECTTEEEEEEEESSEEEEEEEESEEEEEEEETTEEEEEEEETTEEEEE
T ss_pred EEEEEecCCcEecCcCCCCCEEEEEEeEEEEEEEEeCCCcEEEEECCCCEEEE
Confidence 5566788888765543345899999999998862 2245678999998744
No 153
>3es4_A Uncharacterized protein DUF861 with A RMLC-like C; 17741406, protein of unknown function (DUF861) with A RMLC-L fold; HET: MSE; 1.64A {Agrobacterium tumefaciens str}
Probab=60.51 E-value=5.5 Score=29.98 Aligned_cols=48 Identities=17% Similarity=0.206 Sum_probs=33.8
Q ss_pred EEeCCCCEEEeCCCCCCeEEEEEeeEEEEEeCcEEEEEeCCCCeechhh
Q psy9025 142 VLYLPGDYICRKGEVGKEMYIVKTGQVQVVSGETVLATLTEGSVFGEIS 190 (361)
Q Consensus 142 ~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~~~~~~~~l~~Gd~fGe~~ 190 (361)
....+|..-+.. +..+.++.|++|.+.+...+.....+++||.|-..+
T Consensus 47 We~tPG~~~~~~-~~~~E~~~iLeG~~~lt~ddG~~~~l~aGD~~~~P~ 94 (116)
T 3es4_A 47 WMAEPGIYNYAG-RDLEETFVVVEGEALYSQADADPVKIGPGSIVSIAK 94 (116)
T ss_dssp EEECSEEEEECC-CSEEEEEEEEECCEEEEETTCCCEEECTTEEEEECT
T ss_pred EecCCceeECee-CCCcEEEEEEEeEEEEEeCCCeEEEECCCCEEEECC
Confidence 345666554443 334589999999999996555567899999885543
No 154
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=60.35 E-value=1 Score=40.79 Aligned_cols=59 Identities=8% Similarity=-0.046 Sum_probs=36.0
Q ss_pred CcccccCcccc----cccccccccccCchhhhh------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 301 SKSLNKRPHRR----VNRSASADTYFHPKQQRR------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 301 ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
|-.++..++++ +...+.+....++.++.| .+......+++.. ..+++.|+.|||++||+
T Consensus 62 E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iv 134 (346)
T 1ua2_A 62 EIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWIL 134 (346)
T ss_dssp HHHHHHHCCCTTBCCEEEEECCTTCCEEEEECCSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHhhCCCCCCCeEEEEEeeCCceEEEEEcCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCEE
Confidence 44444444444 334556666677776655 2222222255553 78899999999999987
No 155
>3l2h_A Putative sugar phosphate isomerase; AFE_0303, structural GEN joint center for structural genomics, JCSG; HET: MSE CXS; 1.85A {Acidithiobacillus ferrooxidans}
Probab=60.28 E-value=22 Score=27.87 Aligned_cols=46 Identities=13% Similarity=0.127 Sum_probs=32.4
Q ss_pred ceEEeCCCCE-EE-eCCCCCCeEEEEEeeEEEEEeCcEEEEEeCCCCee
Q psy9025 140 RPVLYLPGDY-IC-RKGEVGKEMYIVKTGQVQVVSGETVLATLTEGSVF 186 (361)
Q Consensus 140 ~~~~~~~ge~-I~-~~G~~~~~ly~I~~G~v~v~~~~~~~~~l~~Gd~f 186 (361)
....+.||.. .- ..-.....+++|++|.+.+.-++.. ..+.+||++
T Consensus 49 ~~~~l~pg~~~~~~H~H~~~~E~~~Vl~G~~~~~~~~~~-~~l~~Gd~i 96 (162)
T 3l2h_A 49 HLIQIEPGKESTEYHLHHYEEEAVYVLSGKGTLTMENDQ-YPIAPGDFV 96 (162)
T ss_dssp EEEEECTTCBSSSSBEESSCCEEEEEEESCEEEEETTEE-EEECTTCEE
T ss_pred EEEEECCCCcCCCCccCCCCCEEEEEEEEEEEEEECCEE-EEeCCCCEE
Confidence 3466788874 21 1122467899999999999855543 679999987
No 156
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=60.20 E-value=0.54 Score=41.71 Aligned_cols=60 Identities=8% Similarity=0.004 Sum_probs=36.5
Q ss_pred cCcccccCcccc----cccccccccccCchhhhh-------hhccCCCCCCCC----ccceeehhhhhhhhcccc
Q psy9025 300 GSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQTPTGHNNS----FECQVTVHREDIHESHIT 359 (361)
Q Consensus 300 ~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~~~~~~~~~----~~a~v~~a~~~lH~~~i~ 359 (361)
.|-.++..++++ +...+.+....++.++.| ++......+++. ++.+++.|+.|||++||+
T Consensus 56 ~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~iv 130 (310)
T 3s95_A 56 KEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNII 130 (310)
T ss_dssp HHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHhCCCcCcccEEEEEecCCeeEEEEEecCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 444555555555 334555666666666655 232212124443 288999999999999986
No 157
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=59.93 E-value=0.22 Score=43.57 Aligned_cols=59 Identities=5% Similarity=-0.020 Sum_probs=38.1
Q ss_pred ccCcccccCcccc----cccccccccccCchhhhh--------hhccCCCCCCCC----ccceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRPHRR----VNRSASADTYFHPKQQRR--------LLHQTPTGHNNS----FECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~--------~~~~~~~~~~~~----~~a~v~~a~~~lH~~~i~ 359 (361)
..|..++..+.++ +...+.+....++.++.| +....+ +++. +..+++.|+.|||++||+
T Consensus 57 ~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~--~~~~~~~~~~~qi~~~l~~LH~~~i~ 131 (279)
T 3fdn_A 57 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCHSKRVI 131 (279)
T ss_dssp HHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHHSS--CCHHHHHHHHHHHHHHHHHHHTTTCE
T ss_pred HHHHHHHHcCCCCCCcchhheEecCCEEEEEEecCCCCcHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHhCCEe
Confidence 4566666666666 334566666666666655 122122 4444 278899999999999986
No 158
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=59.30 E-value=0.75 Score=41.06 Aligned_cols=61 Identities=16% Similarity=0.116 Sum_probs=38.0
Q ss_pred ccCcccccCcccc----cccccccccccCchhhhh------hhc-----cCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRPHRR----VNRSASADTYFHPKQQRR------LLH-----QTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~------~~~-----~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
..|-.++..+.++ +...+.+...+|+.++.| .+. ..+.++++.. +.+++.|+.|||++||+
T Consensus 51 ~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~iv 130 (317)
T 2pmi_A 51 IREISLMKELKHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKIL 130 (317)
T ss_dssp HHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEECCCCBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHhcCCCCcceEEEEEEECCeEEEEEEecCCCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 3455666666666 344666666677776655 111 1112244432 66899999999999986
No 159
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=59.13 E-value=0.29 Score=43.99 Aligned_cols=61 Identities=11% Similarity=0.005 Sum_probs=38.1
Q ss_pred ccCcccccCc-ccc----cccccccccccCchhhhh------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRP-HRR----VNRSASADTYFHPKQQRR------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~-~~~----~~~t~~d~~~~~~l~~~~------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
..|..++..+ .++ +...+.+..+.++.++.| ++......+++.. +.+++.|++|||++||+
T Consensus 52 ~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ii 127 (330)
T 2izr_A 52 HLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLI 127 (330)
T ss_dssp HHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 3455566555 444 334556666777777665 2221111255442 88999999999999987
No 160
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=58.95 E-value=0.46 Score=42.76 Aligned_cols=60 Identities=12% Similarity=-0.047 Sum_probs=38.6
Q ss_pred ccCcccccCcccc----cccccccccccCchhhhh-------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
..|-.++..++++ +...+.+...+++.++.| ++.. ...+++.. ..+++.|+.|||+.||+
T Consensus 62 ~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~al~~lH~~~iv 136 (326)
T 2y0a_A 62 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE-KESLTEEEATEFLKQILNGVYYLHSLQIA 136 (326)
T ss_dssp HHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHTT-SSCCBHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEEcCCCCCHHHHHHh-cCCcCHHHHHHHHHHHHHHHHHHHHCCeE
Confidence 3455566666665 344666777777777766 2221 11144442 88999999999999986
No 161
>1o4t_A Putative oxalate decarboxylase; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; 1.95A {Thermotoga maritima} SCOP: b.82.1.9
Probab=58.73 E-value=38 Score=25.49 Aligned_cols=46 Identities=15% Similarity=0.182 Sum_probs=32.5
Q ss_pred ceEEeCCCCEEEeCCCC-CCeEEEEEeeEEEEEeCcEEEEEeCCCCee
Q psy9025 140 RPVLYLPGDYICRKGEV-GKEMYIVKTGQVQVVSGETVLATLTEGSVF 186 (361)
Q Consensus 140 ~~~~~~~ge~I~~~G~~-~~~ly~I~~G~v~v~~~~~~~~~l~~Gd~f 186 (361)
....+.||..+-.---. ...+++|++|.+.+.-++. ...+.+||++
T Consensus 60 ~~~~~~pg~~~~~H~H~~~~E~~~Vl~G~~~~~i~~~-~~~l~~Gd~i 106 (133)
T 1o4t_A 60 ARMKLPPGSSVGLHKHEGEFEIYYILLGEGVFHDNGK-DVPIKAGDVC 106 (133)
T ss_dssp EEEEECTTCEEEEEECCSEEEEEEEEESEEEEEETTE-EEEEETTEEE
T ss_pred EEEEECCCCccCceECCCccEEEEEEeCEEEEEECCE-EEEeCCCcEE
Confidence 35567888766432223 3689999999999985553 4568999877
No 162
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=58.25 E-value=0.51 Score=40.99 Aligned_cols=58 Identities=10% Similarity=0.003 Sum_probs=36.7
Q ss_pred cCcccccCcccc----cccccccccccCchhhhh--------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 300 GSKSLNKRPHRR----VNRSASADTYFHPKQQRR--------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 300 ~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~--------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
.|-.++..+.++ +...+.+....++.++.| +..+.+ +++.. +.+++.|++|||++||+
T Consensus 55 ~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~--~~~~~~~~i~~~i~~~l~~lH~~~i~ 128 (277)
T 3f3z_A 55 QEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRV--FRESDAARIMKDVLSAVAYCHKLNVA 128 (277)
T ss_dssp HHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHCS--CCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHhCCCCCEeeEEEEEecCCeEEEEEeccCCCcHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 344555555555 334666666666666655 222223 44442 88999999999999986
No 163
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=58.19 E-value=0.49 Score=41.72 Aligned_cols=17 Identities=18% Similarity=0.030 Sum_probs=15.6
Q ss_pred cceeehhhhhhhhcccc
Q psy9025 343 ECQVTVHREDIHESHIT 359 (361)
Q Consensus 343 ~a~v~~a~~~lH~~~i~ 359 (361)
...++.|+.|||++||+
T Consensus 143 ~~qi~~~l~~lH~~~iv 159 (298)
T 2zv2_A 143 FQDLIKGIEYLHYQKII 159 (298)
T ss_dssp HHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHHHHHHCCee
Confidence 77899999999999986
No 164
>1y9q_A Transcriptional regulator, HTH_3 family; transcriptional regulaator, strucutral genomics, protein structure initiative, PSI; 1.90A {Vibrio cholerae} SCOP: a.35.1.8 b.82.1.15
Probab=58.13 E-value=45 Score=26.79 Aligned_cols=45 Identities=18% Similarity=0.093 Sum_probs=31.5
Q ss_pred eEEeCCCCEEEe--CCCCCCeEEEEEeeEEEEEeCcEEEEEeCCCCee
Q psy9025 141 PVLYLPGDYICR--KGEVGKEMYIVKTGQVQVVSGETVLATLTEGSVF 186 (361)
Q Consensus 141 ~~~~~~ge~I~~--~G~~~~~ly~I~~G~v~v~~~~~~~~~l~~Gd~f 186 (361)
...+.||..... -......+++|++|.+.+.-++. ...+.+||++
T Consensus 108 ~~~~~pg~~~~~~~H~h~~~E~~~Vl~G~~~~~~~~~-~~~l~~GD~i 154 (192)
T 1y9q_A 108 EITLLDHHQQMSSPHALGVIEYIHVLEGIMKVFFDEQ-WHELQQGEHI 154 (192)
T ss_dssp EEEECTTCEEEECCCSTTCEEEEEEEESCEEEEETTE-EEEECTTCEE
T ss_pred EEEECCCCCccCCCCCCCCEEEEEEEEeEEEEEECCE-EEEeCCCCEE
Confidence 345677776542 22334689999999999985543 3479999987
No 165
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=58.07 E-value=0.7 Score=40.75 Aligned_cols=57 Identities=9% Similarity=0.035 Sum_probs=35.0
Q ss_pred CcccccCcccc----cccccccccccCchhhhh--------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 301 SKSLNKRPHRR----VNRSASADTYFHPKQQRR--------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 301 ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~--------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
|-.++..++++ +...+.+....|+.++.| +....+ +++.. ...++.|+.|||++||+
T Consensus 61 e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~--~~~~~~~~~~~qi~~~l~~lH~~~i~ 133 (294)
T 4eqm_A 61 EVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGP--LSVDTAINFTNQILDGIKHAHDMRIV 133 (294)
T ss_dssp HHHHHTTCCBTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHCS--CCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHhcCCCCCCceEEEeeeeCCeEEEEEeCCCCCCHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 33444444444 333556666666676655 222223 44442 78999999999999987
No 166
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=58.06 E-value=0.51 Score=41.63 Aligned_cols=56 Identities=7% Similarity=-0.038 Sum_probs=34.7
Q ss_pred cccccCcccc----cccccccccccCchhhhh-------hhccCCCCCCCC---ccceeehhhhhhhhcccc
Q psy9025 302 KSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQTPTGHNNS---FECQVTVHREDIHESHIT 359 (361)
Q Consensus 302 k~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~~~~~~~~~---~~a~v~~a~~~lH~~~i~ 359 (361)
-.++..+.++ ++..+.+....|+.++.| ++.+.+ ..+. +...++.|++|||++||+
T Consensus 82 ~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~--~~~~~~~i~~ql~~aL~~lH~~giv 151 (286)
T 3uqc_A 82 TLRLSRIDKPGVARVLDVVHTRAGGLVVAEWIRGGSLQEVADTSP--SPVGAIRAMQSLAAAADAAHRAGVA 151 (286)
T ss_dssp HHHHHTCCCTTBCCEEEEEEETTEEEEEEECCCEEEHHHHHTTCC--CHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHhcCCCCCcceeeEEEEECCcEEEEEEecCCCCHHHHHhcCC--ChHHHHHHHHHHHHHHHHHHHCCCc
Confidence 3334444444 334555666677777766 344222 2222 278899999999999997
No 167
>2q30_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.94A {Desulfovibrio desulfuricans subsp}
Probab=57.89 E-value=43 Score=23.68 Aligned_cols=68 Identities=15% Similarity=0.168 Sum_probs=40.2
Q ss_pred cceEEeCCCCEEEeCCCCC-CeE-EEEEeeEEEEEeCcEEEEEeCCCCeechhhhhcccCCCceeeEEEecceEEEEE
Q psy9025 139 LRPVLYLPGDYICRKGEVG-KEM-YIVKTGQVQVVSGETVLATLTEGSVFGEISLLALAGTNRRTADVRSHGFSNLFV 214 (361)
Q Consensus 139 l~~~~~~~ge~I~~~G~~~-~~l-y~I~~G~v~v~~~~~~~~~l~~Gd~fGe~~ll~~~~~~~~~~~v~A~~~~~~~~ 214 (361)
+....+.+|..+-..-... ..+ ++|++|.+.+.-++.....+.+||++=..+ +.+ ..+.+.+++.++.
T Consensus 35 ~~~~~~~~g~~~~~H~H~~~~e~~~~vl~G~~~~~~~~~~~~~l~~Gd~~~ip~------~~~--H~~~~~~~~~~l~ 104 (110)
T 2q30_A 35 IVSFTFKAGQELPVHSHNIEGELNIVVLEGEGEFVGDGDAVIPAPRGAVLVAPI------STP--HGVRAVTDMKVLV 104 (110)
T ss_dssp EEEEEECTTCEEEEECCSSSCEEEEEEEESCEEEECGGGCEEEECTTEEEEEET------TSC--EEEEESSSEEEEE
T ss_pred EEEEEECCCCcCCcccCCCCccEEEEEEeCEEEEEeCCCEEEEECCCCEEEeCC------CCc--EEEEEcCCcEEEE
Confidence 3445678888765432232 456 899999999885422246799998763322 222 3445556665544
No 168
>1vj2_A Novel manganese-containing cupin TM1459; structural genomics, joint for structural genomics, JCSG; 1.65A {Thermotoga maritima} SCOP: b.82.1.10
Probab=57.68 E-value=22 Score=26.51 Aligned_cols=45 Identities=22% Similarity=0.246 Sum_probs=30.6
Q ss_pred eEEeCCCCEEEeCCCCCCeEEEEEeeEEEEEeCcEEEEEeCCCCee
Q psy9025 141 PVLYLPGDYICRKGEVGKEMYIVKTGQVQVVSGETVLATLTEGSVF 186 (361)
Q Consensus 141 ~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~~~~~~~~l~~Gd~f 186 (361)
...+.+|..+-.---....+++|++|.+.+.-++. ...+.+||++
T Consensus 52 ~~~~~pg~~~~~H~H~~~e~~~Vl~G~~~~~i~~~-~~~l~~Gd~i 96 (126)
T 1vj2_A 52 LFTVEPGGLIDRHSHPWEHEIFVLKGKLTVLKEQG-EETVEEGFYI 96 (126)
T ss_dssp EEEEEEEEEEEEECCSSCEEEEEEESEEEEECSSC-EEEEETTEEE
T ss_pred EEEECCCCcCCceeCCCcEEEEEEEeEEEEEECCE-EEEECCCCEE
Confidence 44556666554333346789999999999884433 2568898877
No 169
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=56.44 E-value=0.69 Score=42.04 Aligned_cols=59 Identities=10% Similarity=-0.072 Sum_probs=37.2
Q ss_pred ccCcccccCcccc----cccccccccccCchhhhh-------hh-ccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LL-HQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~-~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
..|-.++..+.++ +...+.+...+++.++.| .+ .+.. +++.- ..+++.|+.|||++||+
T Consensus 96 ~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~i~~qi~~~L~~LH~~~iv 170 (349)
T 2w4o_A 96 RTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGY--YSERDAADAVKQILEAVAYLHENGIV 170 (349)
T ss_dssp ---CHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHTTCSS--CCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeCCCCCHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCeE
Confidence 4566677776666 334566666667776655 12 2122 44442 78899999999999997
No 170
>2ih3_C Voltage-gated potassium channel; ION channel D-amino acid semi-synthetic, membrane protein; HET: 1EM; 1.72A {Streptomyces lividans} PDB: 2ih1_C* 1r3j_C* 1k4d_C* 1r3i_C* 1k4c_C* 1r3k_C* 1r3l_C* 2bob_C* 2boc_C* 2hvj_C* 2hvk_C* 2itc_C 2itd_C 3gb7_C* 3iga_C* 1jvm_A 1s5h_C* 3ifx_A* 1j95_A 2jk5_C* ...
Probab=56.42 E-value=0.79 Score=35.00 Aligned_cols=37 Identities=11% Similarity=-0.012 Sum_probs=29.8
Q ss_pred eecCCCCcccc---cceeecceeeeehhhHHHHHhhhhhh
Q psy9025 3 IYPRNNETEAN---TWLRKESVPEQVRGDIESGVDEDEEY 39 (361)
Q Consensus 3 ~~~~~~~~~~~---~~l~g~~vfayiiG~i~s~~~~~~~~ 39 (361)
++|.+...+.. .++.|.+++++.+|.+++.+.+..++
T Consensus 81 i~P~t~~gr~~~~~~~~~Gi~~~~~~~~~i~~~~~~~~~~ 120 (122)
T 2ih3_C 81 LYPVTLWGRLVAVVVMVAGITSFGLVTAALATWFVGREQE 120 (122)
T ss_dssp SCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 46777777754 47899999999999999999876543
No 171
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=55.87 E-value=0.53 Score=43.34 Aligned_cols=61 Identities=5% Similarity=-0.087 Sum_probs=39.9
Q ss_pred ccCcccccCcccc----cccccccccccCchhhhh-------hhccCCCCCCCC----ccceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQTPTGHNNS----FECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~~~~~~~~~----~~a~v~~a~~~lH~~~i~ 359 (361)
..|..+|..++++ +...+.+...+|+.++.| +++.....+++. ++.+++.|++|||++||+
T Consensus 160 ~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~iv 235 (377)
T 3cbl_A 160 LQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCI 235 (377)
T ss_dssp THHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcC
Confidence 4567778887777 334666667777777765 222111113333 278899999999999986
No 172
>3d0j_A Uncharacterized protein CA_C3497; beta-barrel, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.53A {Clostridium acetobutylicum atcc 824}
Probab=55.86 E-value=43 Score=25.90 Aligned_cols=59 Identities=12% Similarity=0.205 Sum_probs=39.2
Q ss_pred eCCCCCCeEEEEEeeEEEEEeCc-------EEEEEeCCCCeechhhhhcccCCCceeeEEEecceEEEEEEeHH
Q psy9025 152 RKGEVGKEMYIVKTGQVQVVSGE-------TVLATLTEGSVFGEISLLALAGTNRRTADVRSHGFSNLFVLNKD 218 (361)
Q Consensus 152 ~~G~~~~~ly~I~~G~v~v~~~~-------~~~~~l~~Gd~fGe~~ll~~~~~~~~~~~v~A~~~~~~~~l~~~ 218 (361)
..-+..|.+|+|++|.+.+.-++ .-...+.+|++|--.. --..+-.|.++|.++.+...
T Consensus 45 h~H~~tDE~Fivl~G~l~i~~rd~~~~~~~d~~V~l~~Ge~yvVPk--------GveH~p~a~~e~~vLLiEp~ 110 (140)
T 3d0j_A 45 EIHHSTDEQFILSAGKAILITAEKENDKFNIELTLMEKGKVYNVPA--------ECWFYSITQKDTKMMYVQDS 110 (140)
T ss_dssp EEESSCCEEEEEEESCEEEEEEEEETTEEEEEEEECCTTCCEEECT--------TCEEEEEECTTCEEEEEEES
T ss_pred ccCCCCCeEEEEEecEEEEEEecCcCCCCccceEEecCCCEEEeCC--------CccCcccCCCceEEEEEEeC
Confidence 34456789999999999987321 3456789999874322 12334456677888777543
No 173
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=55.70 E-value=0.73 Score=40.12 Aligned_cols=61 Identities=5% Similarity=-0.063 Sum_probs=38.5
Q ss_pred ccCcccccCcccc----cccccccccccCchhhhh-------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
..|-.++..++++ +...+.+....++.++.| .+......+++.. +..++.|+.|||++||+
T Consensus 67 ~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~ 142 (283)
T 3gen_A 67 IEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFL 142 (283)
T ss_dssp HHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 3455666666655 334666667677776655 2321111144442 78899999999999987
No 174
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=55.21 E-value=0.49 Score=41.57 Aligned_cols=60 Identities=12% Similarity=-0.014 Sum_probs=36.1
Q ss_pred cCcccccCcccc----cccccccccccCchhhhh------hhccC-CCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 300 GSKSLNKRPHRR----VNRSASADTYFHPKQQRR------LLHQT-PTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 300 ~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~------~~~~~-~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
.|-.++..+.++ +...+.+....++.++.| .+... ..++++.. ..+++.|+.|||++||+
T Consensus 51 ~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~ 125 (299)
T 2r3i_A 51 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 125 (299)
T ss_dssp HHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHcCCCCeeeEEEEEecCCceEEEEEcccCCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 445555555555 334555666666666655 22211 11244432 78899999999999997
No 175
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=55.15 E-value=0.6 Score=42.48 Aligned_cols=61 Identities=10% Similarity=-0.007 Sum_probs=39.2
Q ss_pred ccCcccccCcccc----cccccccccccCchhhhh--------hhccC--CCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRPHRR----VNRSASADTYFHPKQQRR--------LLHQT--PTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~--------~~~~~--~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
..|..++..++++ +...+.+...+|+.++.| +.... ...++|.. ..+++.|+.|||++||+
T Consensus 74 ~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~iv 152 (351)
T 3c0i_A 74 KREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNII 152 (351)
T ss_dssp HHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Confidence 4555666666665 444677777788887766 11111 11144442 77999999999999986
No 176
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=54.89 E-value=0.48 Score=42.63 Aligned_cols=58 Identities=3% Similarity=-0.065 Sum_probs=37.7
Q ss_pred cCcccccCcc-cc----cccccccccccCchhhhh--------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 300 GSKSLNKRPH-RR----VNRSASADTYFHPKQQRR--------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 300 ~ek~i~~~~~-~~----~~~t~~d~~~~~~l~~~~--------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
.|-.+++.+. ++ +...+.+....|+.++.| +..+.+ +++.- ..+++.|++|||++||+
T Consensus 54 ~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~i~~qi~~~l~~LH~~~iv 128 (325)
T 3kn6_A 54 KEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKH--FSETEASYIMRKLVSAVSHMHDVGVV 128 (325)
T ss_dssp HHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHCSC--CCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCCe
Confidence 3444444443 44 444677777777777766 222222 55542 88999999999999986
No 177
>2i45_A Hypothetical protein; neisseria meningitidis cupin domain, structural genomics, PS protein structure initiative; 2.50A {Neisseria meningitidis}
Probab=54.59 E-value=20 Score=25.75 Aligned_cols=67 Identities=19% Similarity=0.197 Sum_probs=39.2
Q ss_pred CCCCEEEeCCCCCCeEEEEEeeEEEEEeCcEEEEEeCCCCeechhhhhcccCCCceeeEEEecceEEEEEEeHHH
Q psy9025 145 LPGDYICRKGEVGKEMYIVKTGQVQVVSGETVLATLTEGSVFGEISLLALAGTNRRTADVRSHGFSNLFVLNKDD 219 (361)
Q Consensus 145 ~~ge~I~~~G~~~~~ly~I~~G~v~v~~~~~~~~~l~~Gd~fGe~~ll~~~~~~~~~~~v~A~~~~~~~~l~~~~ 219 (361)
.+|+.....-+....+++|++|.+.+.-++.....+.+||.+=..+ +.+.. ..+.+++.++.++...
T Consensus 36 ~~g~~~~H~H~~~~E~~~Vl~G~~~~~~~~~~~~~l~~Gd~~~ip~------~~~H~--~~~~~~~~~l~i~~~~ 102 (107)
T 2i45_A 36 LLGDYGWHTHGYSDKVLFAVEGDMAVDFADGGSMTIREGEMAVVPK------SVSHR--PRSENGCSLVLIELSD 102 (107)
T ss_dssp EEEECCCBCC--CCEEEEESSSCEEEEETTSCEEEECTTEEEEECT------TCCEE--EEEEEEEEEEEEECC-
T ss_pred CCCCCcceeCCCCCEEEEEEeCEEEEEECCCcEEEECCCCEEEECC------CCcEe--eEeCCCeEEEEEECCC
Confidence 4454332222223789999999999985442246799999873322 33333 3334577777776443
No 178
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=54.56 E-value=0.94 Score=40.63 Aligned_cols=17 Identities=18% Similarity=0.126 Sum_probs=15.9
Q ss_pred cceeehhhhhhhhcccc
Q psy9025 343 ECQVTVHREDIHESHIT 359 (361)
Q Consensus 343 ~a~v~~a~~~lH~~~i~ 359 (361)
+.+++.|+.|||++||+
T Consensus 180 ~~qi~~~l~~LH~~~iv 196 (343)
T 1luf_A 180 ARQVAAGMAYLSERKFV 196 (343)
T ss_dssp HHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHhCCee
Confidence 78899999999999997
No 179
>2o1q_A Putative acetyl/propionyl-COA carboxylase, alpha; putative acetylacetone dioxygenase, structural genomics; HET: MSE PG4; 1.50A {Methylibium petroleiphilum} SCOP: b.82.1.21
Probab=54.55 E-value=11 Score=29.36 Aligned_cols=70 Identities=16% Similarity=0.118 Sum_probs=43.8
Q ss_pred cceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEEeCcEE-EEEeCCCCeechhhhhcccCCCceeeEEEecceEEEEEE
Q psy9025 139 LRPVLYLPGDYICRKGEVGKEMYIVKTGQVQVVSGETV-LATLTEGSVFGEISLLALAGTNRRTADVRSHGFSNLFVL 215 (361)
Q Consensus 139 l~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~~~~~-~~~l~~Gd~fGe~~ll~~~~~~~~~~~v~A~~~~~~~~l 215 (361)
+....++||..+-.-.-+....++|++|......++.. -..+++||++=... +..... +.+.++|.++.+
T Consensus 46 ~~~~~~~pG~~~p~H~H~~~ee~~VL~G~~~~~~g~~~~~~~~~~Gd~~~~p~------g~~H~p-~~~~e~~~~l~~ 116 (145)
T 2o1q_A 46 TAIFDCPAGSSFAAHVHVGPGEYFLTKGKMDVRGGKAAGGDTAIAPGYGYESA------NARHDK-TEFPVASEFYMS 116 (145)
T ss_dssp EEEEEECTTEEECCEEESSCEEEEEEEEEEEETTCGGGTSEEEESSEEEEECT------TCEESC-CEEEEEEEEEEE
T ss_pred EEEEEECCCCCCCccCCCCCEEEEEEEeEEEEcCCCEecceEeCCCEEEEECc------CCccCC-eECCCCeEEEEE
Confidence 55678899998876666678889999999985432211 24567888764432 222221 334556666554
No 180
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=54.49 E-value=0.25 Score=43.23 Aligned_cols=59 Identities=5% Similarity=-0.071 Sum_probs=38.1
Q ss_pred ccCcccccCcccc----cccccccccccCchhhhh--------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRPHRR----VNRSASADTYFHPKQQRR--------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~--------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
..|..++..++++ +...+.+....++.++.| +..... +++.. +..++.|+.|||++||+
T Consensus 62 ~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~qi~~~l~~lH~~~i~ 136 (284)
T 2vgo_A 62 RREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR--FDEQRSATFMEELADALHYCHERKVI 136 (284)
T ss_dssp HHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHHSS--CCHHHHHHHHHHHHHHHHHHHTTTEE
T ss_pred HHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEEEeCCCCcHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCce
Confidence 4555666666666 334566666667776655 222222 44442 78899999999999986
No 181
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=54.04 E-value=1 Score=38.64 Aligned_cols=60 Identities=5% Similarity=-0.102 Sum_probs=34.8
Q ss_pred cCcccccCcccc----cccccccccccCchhhhh-------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 300 GSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 300 ~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
.|-.++..+.++ +...+.+....++.++.| ++......+++.. +..++.|+.|||++||+
T Consensus 52 ~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~ 126 (267)
T 3t9t_A 52 EEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVI 126 (267)
T ss_dssp HHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 344444454444 233455555566666554 2322211144442 78899999999999987
No 182
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=52.99 E-value=0.6 Score=41.94 Aligned_cols=58 Identities=12% Similarity=-0.046 Sum_probs=36.2
Q ss_pred CcccccCcccc----cccccccccccCchhhhh-------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 301 SKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 301 ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
|..++..++++ +...+.+....|+.++.| .+. ....+++.. +.+++.|+.|||++||+
T Consensus 55 E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~i~~qi~~aL~~LH~~giv 127 (323)
T 3tki_A 55 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE-PDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 127 (323)
T ss_dssp HHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCTTEEGGGGSB-TTTBCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHhCCCCCCCeEEEEEecCCeEEEEEEcCCCCcHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 33444444444 344666777777777766 122 111244442 88999999999999986
No 183
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=52.81 E-value=1.1 Score=40.34 Aligned_cols=60 Identities=5% Similarity=-0.056 Sum_probs=37.3
Q ss_pred cCcccccCcccc----cccccccccccCchhhhh-------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 300 GSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 300 ~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
.|..++..+.++ +...+.+....++.++.| ++......+++.. +..++.|+.|||++||+
T Consensus 95 ~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~iv 169 (333)
T 1mqb_A 95 GEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYV 169 (333)
T ss_dssp HHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHhCCCCCCCcEEEEEecCCCcEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 455555555555 333566666677777665 2332221244442 78899999999999986
No 184
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=52.54 E-value=0.99 Score=39.46 Aligned_cols=59 Identities=7% Similarity=-0.005 Sum_probs=37.0
Q ss_pred ccCcccccCcccc----cccccccccccCchhhhh--------hh----ccCCCCCCCCc----cceeehhhhhhhhccc
Q psy9025 299 CGSKSLNKRPHRR----VNRSASADTYFHPKQQRR--------LL----HQTPTGHNNSF----ECQVTVHREDIHESHI 358 (361)
Q Consensus 299 ~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~--------~~----~~~~~~~~~~~----~a~v~~a~~~lH~~~i 358 (361)
..|-.++..++++ +...+.+...+++.++.| +. .+.+ +++.. +.+++.|++|||++||
T Consensus 68 ~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~--~~~~~~~~i~~qi~~~L~~LH~~~i 145 (285)
T 3is5_A 68 EAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKA--LSEGYVAELMKQMMNALAYFHSQHV 145 (285)
T ss_dssp HHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCSCCBHHHHHHHHHHHTCC--CCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhCCCchHHhHHHheecCCeEEEEEEeCCCCcHHHHHHhhhhcccC--CCHHHHHHHHHHHHHHHHHHHhCCE
Confidence 3455555565555 334556666666666655 11 1122 55543 7889999999999998
Q ss_pred c
Q psy9025 359 T 359 (361)
Q Consensus 359 ~ 359 (361)
+
T Consensus 146 v 146 (285)
T 3is5_A 146 V 146 (285)
T ss_dssp C
T ss_pred E
Confidence 7
No 185
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=52.40 E-value=63 Score=27.35 Aligned_cols=65 Identities=15% Similarity=0.074 Sum_probs=42.4
Q ss_pred ceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEEeCcEEEEEeCCCCeechhhhhcccCCCceeeEEEecceEEEEEE
Q psy9025 140 RPVLYLPGDYICRKGEVGKEMYIVKTGQVQVVSGETVLATLTEGSVFGEISLLALAGTNRRTADVRSHGFSNLFVL 215 (361)
Q Consensus 140 ~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~~~~~~~~l~~Gd~fGe~~ll~~~~~~~~~~~v~A~~~~~~~~l 215 (361)
....+.||...-..- .+.+++|++|.+.+.-++. ...+.+||++=..+ +.+...... +++.++.+
T Consensus 53 ~~~~l~Pg~~~~~~~--~ee~~~Vl~G~~~~~~~~~-~~~l~~Gd~~~~p~------~~~H~~~n~--~~~~~l~v 117 (246)
T 1sfn_A 53 FTAEMPAGAQATESV--YQRFAFVLSGEVDVAVGGE-TRTLREYDYVYLPA------GEKHMLTAK--TDARVSVF 117 (246)
T ss_dssp EEEEECTTCEEECCS--SEEEEEEEEEEEEEECSSC-EEEECTTEEEEECT------TCCCEEEEE--EEEEEEEE
T ss_pred EEEEECCCCcCCCCc--eeEEEEEEECEEEEEECCE-EEEECCCCEEEECC------CCCEEEEeC--CCEEEEEE
Confidence 345678887655442 7789999999999984443 35799999874433 333333332 66776665
No 186
>4i4a_A Similar to unknown protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.35A {Photorhabdus luminescens subsp}
Probab=52.15 E-value=67 Score=23.53 Aligned_cols=79 Identities=11% Similarity=0.053 Sum_probs=46.1
Q ss_pred ceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEEeCcEEEEEeCCCCeechhhhhcccCCCceeeEEEecceEE--EEEEeH
Q psy9025 140 RPVLYLPGDYICRKGEVGKEMYIVKTGQVQVVSGETVLATLTEGSVFGEISLLALAGTNRRTADVRSHGFSN--LFVLNK 217 (361)
Q Consensus 140 ~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~~~~~~~~l~~Gd~fGe~~ll~~~~~~~~~~~v~A~~~~~--~~~l~~ 217 (361)
....+.+|...-.---....+++|.+|.+.+.-++. ...+.+||++=-.+ +..........+++. ++.++.
T Consensus 37 ~~~~~~pg~~~~~H~H~~~Ei~~v~~G~~~~~i~~~-~~~l~~Gd~~~i~~------~~~H~~~~~~~~~~~~~~i~f~~ 109 (128)
T 4i4a_A 37 AWCIVRPETKSFRHSHNEYELFIVIQGNAIIRINDE-DFPVTKGDLIIIPL------DSEHHVINNNQEDFHFYTIWWDK 109 (128)
T ss_dssp EEEEECTTEECCCBCCSSEEEEEEEESEEEEEETTE-EEEEETTCEEEECT------TCCEEEEECSSSCEEEEEEEECH
T ss_pred EEEEECCCCccCCEecCCeEEEEEEeCEEEEEECCE-EEEECCCcEEEECC------CCcEEeEeCCCCCEEEEEEEECH
Confidence 345566776443333356789999999999985554 45788998773322 333333332234444 455666
Q ss_pred HHHHHHHH
Q psy9025 218 DDLNEAIE 225 (361)
Q Consensus 218 ~~f~~ll~ 225 (361)
+-+..++.
T Consensus 110 ~~~~~~~~ 117 (128)
T 4i4a_A 110 ESTLNFLT 117 (128)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66655544
No 187
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=52.06 E-value=0.48 Score=41.49 Aligned_cols=59 Identities=12% Similarity=0.022 Sum_probs=36.0
Q ss_pred ccCcccccCcccc----cccccccccccCchhhhh--------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRPHRR----VNRSASADTYFHPKQQRR--------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~--------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
..|-.++..+.++ +...+.+....|+.++.| +..... +++.. ...++.|+.|||++||+
T Consensus 69 ~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~i~~qi~~~l~~LH~~~i~ 143 (287)
T 2wei_A 69 LREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKR--FSEHDAARIIKQVFSGITYMHKHNIV 143 (287)
T ss_dssp HHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSS--CCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHhccCCCccEEEEEEeCCCeEEEEEEccCCCCHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 3455555555555 333555566666665544 222223 44442 88899999999999986
No 188
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=51.98 E-value=0.77 Score=41.98 Aligned_cols=58 Identities=7% Similarity=-0.093 Sum_probs=37.5
Q ss_pred cCcccccCcccc----cccccccccccCchhhhh--------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 300 GSKSLNKRPHRR----VNRSASADTYFHPKQQRR--------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 300 ~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~--------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
.|-.++..++++ +...+.+...+|+.++.| +.+... +++.. ..+++.|+.|||++||+
T Consensus 65 ~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~i~~ql~~~L~~LH~~~iv 138 (361)
T 3uc3_A 65 REIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGR--FSEDEARFFFQQLLSGVSYCHSMQIC 138 (361)
T ss_dssp HHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSS--CCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeCCCCCHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 444455555555 344566667777777766 122222 45442 88999999999999997
No 189
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=51.52 E-value=0.99 Score=40.39 Aligned_cols=59 Identities=8% Similarity=-0.044 Sum_probs=38.2
Q ss_pred ccCcccccCcccc----cccccccccccCchhhhh-------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
..|-.++..++++ +...+.+....++.++.| ++.+.. +++.- +..++.|+.|||++||+
T Consensus 90 ~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--l~~~~~~~i~~qi~~~L~~LH~~~iv 163 (321)
T 2c30_A 90 FNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVR--LNEEQIATVCEAVLQALAYLHAQGVI 163 (321)
T ss_dssp HHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTTCC--CCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHhCCCCCcceEEEEEEECCEEEEEEecCCCCCHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 4555666666665 333555566666676655 334233 55442 88899999999999986
No 190
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=51.49 E-value=1.1 Score=40.51 Aligned_cols=60 Identities=8% Similarity=0.064 Sum_probs=39.2
Q ss_pred ccCcccccCcccc----cccccccccccCchhhhh--------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRPHRR----VNRSASADTYFHPKQQRR--------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~--------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
..|-.++..++++ +...+.+..++++.++.| .+... ..+++.. ...++.|+.|||++||+
T Consensus 77 ~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~g~~l~~~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~~iv 152 (335)
T 3dls_A 77 TLEIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRH-PRLDEPLASYIFRQLVSAVGYLRLKDII 152 (335)
T ss_dssp EHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTSCBHHHHHHTC-CCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHhCCCCCEeeEEEEEeeCCEEEEEEEeCCCCccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeE
Confidence 3466667776666 344667777777776644 22211 1244442 88999999999999986
No 191
>3cew_A Uncharacterized cupin protein; all beta-protein, jelly-roll (cupin-2), structural genomics, protein structure initiative; 2.31A {Bacteroides fragilis}
Probab=50.59 E-value=57 Score=23.95 Aligned_cols=47 Identities=13% Similarity=0.129 Sum_probs=30.2
Q ss_pred cceEEeCCCCEEE--eCCCCCCeEEEEEeeEEEEEeCcEEEEEeCCCCee
Q psy9025 139 LRPVLYLPGDYIC--RKGEVGKEMYIVKTGQVQVVSGETVLATLTEGSVF 186 (361)
Q Consensus 139 l~~~~~~~ge~I~--~~G~~~~~ly~I~~G~v~v~~~~~~~~~l~~Gd~f 186 (361)
+....+.+|..+- ..-+....+|+|++|.+.+.-++. ...+.+||++
T Consensus 28 ~~~~~~~pg~~~~~~H~H~~~e~~~~vl~G~~~~~i~~~-~~~l~~Gd~i 76 (125)
T 3cew_A 28 VSINHLPAGAGVPFVHSHKQNEEIYGILSGKGFITIDGE-KIELQAGDWL 76 (125)
T ss_dssp EEEEEECTTCBCSSEEEESSEEEEEEEEEEEEEEEETTE-EEEEETTEEE
T ss_pred EEEEEECCCCCCCCCccCCCceEEEEEEeCEEEEEECCE-EEEeCCCCEE
Confidence 3445667776542 222223457779999999885544 3568899876
No 192
>1lr5_A Auxin binding protein 1; beta jellyroll, double stranded beta helix, germin-like PROT protein binding; HET: NAG BMA MAN; 1.90A {Zea mays} SCOP: b.82.1.2 PDB: 1lrh_A*
Probab=50.24 E-value=35 Score=26.64 Aligned_cols=49 Identities=14% Similarity=0.196 Sum_probs=32.7
Q ss_pred cceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEEeCc--------EEEEEeCCCCeec
Q psy9025 139 LRPVLYLPGDYICRKGEVGKEMYIVKTGQVQVVSGE--------TVLATLTEGSVFG 187 (361)
Q Consensus 139 l~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~~~--------~~~~~l~~Gd~fG 187 (361)
+....+.+|..+-.--.....+++|++|.+.+.-++ .....+.+||++=
T Consensus 43 ~~~~~~~pg~~~~~H~H~~~E~~~Vl~G~~~~~~~~~~~~~~~~~~~~~l~~Gd~i~ 99 (163)
T 1lr5_A 43 VWLQTISPGQRTPIHRHSCEEVFTVLKGKGTLLMGSSSLKYPGQPQEIPFFQNTTFS 99 (163)
T ss_dssp EEEEEECTTCBCCEEEESSCEEEEEEECCEEEEECCSSSSSCCSCEEEEECTTEEEE
T ss_pred EEEEEECCCCcCCCeECCCCeEEEEEeCEEEEEECCccccccCccEEEEeCCCCEEE
Confidence 334557777754322224567999999999998333 1566899999863
No 193
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=50.22 E-value=0.41 Score=41.56 Aligned_cols=58 Identities=10% Similarity=-0.071 Sum_probs=35.7
Q ss_pred cCcccccCcccc----cccccccccccCchhhhh--------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 300 GSKSLNKRPHRR----VNRSASADTYFHPKQQRR--------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 300 ~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~--------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
.|-.+++.++++ +...+.+....|+.++.| +....+ +++.. ...++.|+.|||++||+
T Consensus 60 ~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~qi~~~l~~lH~~~i~ 133 (276)
T 2h6d_A 60 REIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGR--VEEMEARRLFQQILSAVDYCHRHMVV 133 (276)
T ss_dssp HHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHCS--CCHHHHHHHHHHHHHHHHHHHHHCSS
T ss_pred HHHHHHhcCCCCCEeEEEEEEecCCeEEEEEeccCCCcHHHHHhccCC--CCHHHHHHHHHHHHHHHHHHHHCCCc
Confidence 444455555555 334555566666666655 122222 44442 88899999999999986
No 194
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=50.22 E-value=0.72 Score=40.81 Aligned_cols=58 Identities=10% Similarity=-0.023 Sum_probs=36.0
Q ss_pred CcccccCcccc----cccccccccccCchhhhh-------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 301 SKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 301 ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
|-.++..++++ +...+.+....++.++.| +.+ ...++++.. +..++.|+.|||++||+
T Consensus 52 E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~-~~~~~~~~~~~~i~~~l~~~l~~lH~~~iv 124 (311)
T 4agu_A 52 EIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDR-YQRGVPEHLVKSITWQTLQAVNFCHKHNCI 124 (311)
T ss_dssp HHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHH-TSSCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHhCCCCCccchhheeecCCeEEEEEEeCCCchHHHHHh-hhcCCCHHHHHHHHHHHHHHHHHHHHCCCc
Confidence 44444444444 334566666677777665 222 122255542 77899999999999986
No 195
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=49.80 E-value=67 Score=27.04 Aligned_cols=47 Identities=11% Similarity=0.098 Sum_probs=35.5
Q ss_pred cceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEEeCcEEEEEeCCCCee
Q psy9025 139 LRPVLYLPGDYICRKGEVGKEMYIVKTGQVQVVSGETVLATLTEGSVF 186 (361)
Q Consensus 139 l~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~~~~~~~~l~~Gd~f 186 (361)
+....+.+|..+-.---+...+++|++|.+.+.-++. ...+.+||.+
T Consensus 36 ~~~~~~~pg~~~~~H~H~~~e~~~Vl~G~~~~~~~~~-~~~l~~Gd~i 82 (243)
T 3h7j_A 36 VLMSYVPPHTNVEPHQHKEVQIGMVVSGELMMTVGDV-TRKMTALESA 82 (243)
T ss_dssp EEEEEECTTEEEEEECCSSEEEEEEEESEEEEEETTE-EEEEETTTCE
T ss_pred EEEEEECCCCccCCEECCCcEEEEEEEeEEEEEECCE-EEEECCCCEE
Confidence 4555688998876555567889999999999986544 4578999844
No 196
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=49.63 E-value=1.2 Score=38.82 Aligned_cols=60 Identities=8% Similarity=0.044 Sum_probs=37.2
Q ss_pred cCcccccCcccc----cccccccccccCchhhhh-------hhccCC-CCCCCCc----cceeehhhhhhhhcccc
Q psy9025 300 GSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQTP-TGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 300 ~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~~~-~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
.|-.++..++++ +...+.+...+++.++.| ++.... ..+++.. +..++.|+.|||++||+
T Consensus 58 ~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~ 133 (288)
T 3kfa_A 58 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFI 133 (288)
T ss_dssp HHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCCcc
Confidence 445555555555 344666677677777655 232111 1144432 67999999999999987
No 197
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=49.14 E-value=2.6 Score=38.65 Aligned_cols=61 Identities=8% Similarity=-0.063 Sum_probs=36.9
Q ss_pred ccCcccccCcccc-ccc---c-cccccccCchhhhh-------hhccCCCCCCCC----ccceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRPHRR-VNR---S-ASADTYFHPKQQRR-------LLHQTPTGHNNS----FECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~~~-~~~---t-~~d~~~~~~l~~~~-------~~~~~~~~~~~~----~~a~v~~a~~~lH~~~i~ 359 (361)
..|..++..++++ +.+ . +.+....++.++.| ++++....+++. ++.+++.|+.|||++||+
T Consensus 138 ~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~iv 214 (373)
T 3c1x_A 138 LTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFV 214 (373)
T ss_dssp HHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEe
Confidence 4567777777776 322 2 23344556666655 233222113322 267899999999999997
No 198
>4axo_A EUTQ, ethanolamine utilization protein; structural protein, bacterial microcompartment, BMC; 1.00A {Clostridium difficile}
Probab=48.70 E-value=55 Score=25.64 Aligned_cols=31 Identities=13% Similarity=0.168 Sum_probs=24.8
Q ss_pred CCCeEEEEEeeEEEEEeCcEEEEEeCCCCeec
Q psy9025 156 VGKEMYIVKTGQVQVVSGETVLATLTEGSVFG 187 (361)
Q Consensus 156 ~~~~ly~I~~G~v~v~~~~~~~~~l~~Gd~fG 187 (361)
..+.+++|++|.+.+.-++. ...+++||.|=
T Consensus 83 ~~eE~~yVLeG~~~l~i~g~-~~~l~~GD~i~ 113 (151)
T 4axo_A 83 NYDEIDYVIDGTLDIIIDGR-KVSASSGELIF 113 (151)
T ss_dssp SSEEEEEEEEEEEEEEETTE-EEEEETTCEEE
T ss_pred CCcEEEEEEEeEEEEEECCE-EEEEcCCCEEE
Confidence 46789999999999986543 57799999873
No 199
>2q1z_B Anti-sigma factor CHRR, transcriptional activator; ECF sigma factor, cupin fold, zinc bindin transcription factor; 2.40A {Rhodobacter sphaeroides} PDB: 2z2s_B
Probab=48.63 E-value=34 Score=28.03 Aligned_cols=65 Identities=12% Similarity=0.058 Sum_probs=44.8
Q ss_pred hcceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEEeCcEEEEEeCCCCeechhhhhcccCCCceeeEEEe--cceEEEEEE
Q psy9025 138 KLRPVLYLPGDYICRKGEVGKEMYIVKTGQVQVVSGETVLATLTEGSVFGEISLLALAGTNRRTADVRS--HGFSNLFVL 215 (361)
Q Consensus 138 ~l~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~~~~~~~~l~~Gd~fGe~~ll~~~~~~~~~~~v~A--~~~~~~~~l 215 (361)
.+....+.+|..+-.-.-.+..+++|++|.+. ++. ..+.+||++=. ......+..+ .+.|.||..
T Consensus 126 ~v~l~~~~pG~~~p~H~H~g~E~~~VL~G~f~--de~---~~~~~Gd~~~~--------p~g~~H~p~a~~~~gc~~l~~ 192 (195)
T 2q1z_B 126 IARLLWIPGGQAVPDHGHRGLELTLVLQGAFR--DET---DRFGAGDIEIA--------DQELEHTPVAERGLDCICLAA 192 (195)
T ss_dssp EEEEEEECTTCBCCCCCCSSCEEEEEEESEEE--CSS---SEEETTCEEEE--------CSSCCCCCEECSSSCEEEEEE
T ss_pred EEEEEEECCCCCCCCcCCCCeEEEEEEEEEEE--CCc---EEECCCeEEEe--------CcCCccCCEeCCCCCEEEEEE
Confidence 45677889999998877788999999999866 222 35677776522 2222334445 678888875
No 200
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=48.58 E-value=1.2 Score=38.41 Aligned_cols=43 Identities=7% Similarity=0.025 Sum_probs=27.6
Q ss_pred ccccccccccCchhhhh-------hhccCCCCCCCCc----cceeehhhhhhhhcc
Q psy9025 313 NRSASADTYFHPKQQRR-------LLHQTPTGHNNSF----ECQVTVHREDIHESH 357 (361)
Q Consensus 313 ~~t~~d~~~~~~l~~~~-------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~ 357 (361)
...+.+....++.++.| ++++.+ +++.. +..++.|+.|||++|
T Consensus 72 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~i~~~l~~~l~~lH~~~ 125 (271)
T 3dtc_A 72 RGVCLKEPNLCLVMEFARGGPLNRVLSGKR--IPPDILVNWAVQIARGMNYLHDEA 125 (271)
T ss_dssp EEEECCC--CEEEEECCTTEEHHHHHTSSC--CCHHHHHHHHHHHHHHHHHHHHSS
T ss_pred EEEEecCCceEEEEEcCCCCCHHHHhhcCC--CCHHHHHHHHHHHHHHHHHHHhCC
Confidence 33555566666666655 344233 55543 889999999999999
No 201
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=48.54 E-value=1.3 Score=40.59 Aligned_cols=43 Identities=16% Similarity=0.104 Sum_probs=26.7
Q ss_pred ccccccCchhhhh------hhc---cCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 317 SADTYFHPKQQRR------LLH---QTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 317 ~d~~~~~~l~~~~------~~~---~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
.+..|+++.++.| .+. .....+++.. +.+++.|+.|||++||+
T Consensus 108 ~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~gi~ 163 (383)
T 3eb0_A 108 SQNKYLNVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGIC 163 (383)
T ss_dssp --CCEEEEEECCCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEE
T ss_pred CCceEEEEEEecCCccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCcCc
Confidence 4555676776655 111 1112255543 78999999999999986
No 202
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=48.52 E-value=0.97 Score=40.66 Aligned_cols=57 Identities=7% Similarity=0.073 Sum_probs=35.6
Q ss_pred CcccccCcccc----cccccccccccCchhhhh-------hh-ccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 301 SKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LL-HQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 301 ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~-~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
|-.++..++++ +...+.+..++|+.++.| ++ .... +++.. ..+++.|++|||++||+
T Consensus 91 E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~--l~~~~~~~i~~qi~~aL~~LH~~~iv 163 (335)
T 2owb_A 91 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKA--LTEPEARYYLRQIVLGCQYLHRNRVI 163 (335)
T ss_dssp HHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHHHCS--CCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHhCCCCCCCeEEEEEecCCeEEEEEecCCCCCHHHHHhccCC--CCHHHHHHHHHHHHHHHHHHHHCCCE
Confidence 44444444444 334566667777777665 11 1122 44442 88999999999999986
No 203
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=48.39 E-value=1.3 Score=42.53 Aligned_cols=61 Identities=8% Similarity=0.035 Sum_probs=40.4
Q ss_pred ccCcccccCcccc----cccccccccccCchhhhh-------hhccCC-CCCCCCc----cceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQTP-TGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~~~-~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
..|-.+|..++++ +...+.+...+|+.++.| +++... ..+++.. +..++.|++|||++||+
T Consensus 264 ~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~iv 340 (495)
T 1opk_A 264 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFI 340 (495)
T ss_dssp HHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 4567777777777 344666677777777765 233211 1133332 78999999999999986
No 204
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=48.24 E-value=0.8 Score=39.83 Aligned_cols=58 Identities=7% Similarity=0.021 Sum_probs=34.5
Q ss_pred cCcccccCcccc----cccccccccccCchhhhh--------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 300 GSKSLNKRPHRR----VNRSASADTYFHPKQQRR--------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 300 ~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~--------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
.|..++..++++ +...+.+....++.++.| +..... +++.- ...++.|+.|||++||+
T Consensus 54 ~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~--~~~~~~~~~~~~i~~~l~~lH~~~i~ 127 (284)
T 3kk8_A 54 REARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREF--YSEADASHCIQQILESIAYCHSNGIV 127 (284)
T ss_dssp HHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSS--CCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHcCCCCcCeEEEEEEcCCEEEEEEecCCCCCHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCcC
Confidence 344444444444 333555666666665544 222222 44442 78899999999999986
No 205
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=48.21 E-value=2.8 Score=35.82 Aligned_cols=61 Identities=10% Similarity=-0.062 Sum_probs=36.8
Q ss_pred ccCcccccCcccc----cccccccc--cccCchhhhh-------hhccCCC-CCCCCc----cceeehhhhhhhhcc--c
Q psy9025 299 CGSKSLNKRPHRR----VNRSASAD--TYFHPKQQRR-------LLHQTPT-GHNNSF----ECQVTVHREDIHESH--I 358 (361)
Q Consensus 299 ~~ek~i~~~~~~~----~~~t~~d~--~~~~~l~~~~-------~~~~~~~-~~~~~~----~a~v~~a~~~lH~~~--i 358 (361)
..|-.++..++++ +...+.+. ...++.++.| ++..... .+++.. +.+++.|+.|||++| |
T Consensus 55 ~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i 134 (271)
T 3kmu_A 55 NEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLI 134 (271)
T ss_dssp HHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCC
T ss_pred HHHHHHHHhcCCCchhheEEEEccCCCCCeEeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCce
Confidence 4556666666666 33344443 5566666655 2332221 144442 889999999999999 7
Q ss_pred c
Q psy9025 359 T 359 (361)
Q Consensus 359 ~ 359 (361)
+
T Consensus 135 ~ 135 (271)
T 3kmu_A 135 P 135 (271)
T ss_dssp T
T ss_pred e
Confidence 5
No 206
>2opk_A Hypothetical protein; putative mannose-6-phosphate isomerase, structural genomics, center for structural genomics, JCSG; 2.10A {Ralstonia eutropha}
Probab=48.16 E-value=39 Score=24.64 Aligned_cols=35 Identities=11% Similarity=0.102 Sum_probs=25.7
Q ss_pred CCCCeEEEEEeeEEEEEeCcEE-EEEeCCCCeechh
Q psy9025 155 EVGKEMYIVKTGQVQVVSGETV-LATLTEGSVFGEI 189 (361)
Q Consensus 155 ~~~~~ly~I~~G~v~v~~~~~~-~~~l~~Gd~fGe~ 189 (361)
...+.+++|++|.+.+.-++.. ...+.+||++--.
T Consensus 51 ~~~~E~~~Vl~G~~~l~~~~~~~~~~l~~Gd~i~ip 86 (112)
T 2opk_A 51 SPQDEWVMVVSGSAGIECEGDTAPRVMRPGDWLHVP 86 (112)
T ss_dssp CSSEEEEEEEESCEEEEETTCSSCEEECTTEEEEEC
T ss_pred CCccEEEEEEeCeEEEEECCEEEEEEECCCCEEEEC
Confidence 4567899999999999844432 1579999987543
No 207
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=48.13 E-value=0.55 Score=40.55 Aligned_cols=60 Identities=8% Similarity=-0.077 Sum_probs=35.2
Q ss_pred cCcccccCcccc----cccccccccccCchhhhh-------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 300 GSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 300 ~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
.|-.++..++++ +...+.+...+++.++.| .+......+++.. +..++.|+.|||++||+
T Consensus 52 ~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~ 126 (268)
T 3sxs_A 52 QEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFI 126 (268)
T ss_dssp HHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHhCCCCCEeeEEEEEccCCceEEEEEccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 344444444444 333556666666666655 1221111144442 88899999999999986
No 208
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=47.84 E-value=1.4 Score=39.92 Aligned_cols=61 Identities=10% Similarity=0.034 Sum_probs=35.9
Q ss_pred ccCcccccCcccc-c---cccc-----ccccccCchhhhh------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRPHRR-V---NRSA-----SADTYFHPKQQRR------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~~~-~---~~t~-----~d~~~~~~l~~~~------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
..|-.++..++++ + ...+ .+..++|+.++.| .+......+++.. ..+++.|+.|||++||+
T Consensus 77 ~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iv 156 (362)
T 3pg1_A 77 LREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVV 156 (362)
T ss_dssp HHHHHHHHHCCCTTBCCCSEEEEECCTTTCCEEEEEEECCSEEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHhCCCcCccceeeeEEeccCCCcceEEEEEccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCcCE
Confidence 3455556665555 2 2222 3344566666665 2221221244442 88899999999999997
No 209
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=47.78 E-value=0.91 Score=41.76 Aligned_cols=61 Identities=7% Similarity=-0.084 Sum_probs=37.4
Q ss_pred ccCcccccCcccc----cccccccccccCchhhhh-------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
..|-.++..++++ +...+.+...+++.++.| .+......+++.- ...++.|+.|||++||+
T Consensus 134 ~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iv 209 (373)
T 2x4f_A 134 KNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYIL 209 (373)
T ss_dssp HHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 3455666666665 334566666666776655 1211111144432 77999999999999986
No 210
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=47.67 E-value=1.2 Score=41.34 Aligned_cols=43 Identities=9% Similarity=-0.028 Sum_probs=27.4
Q ss_pred ccccccCchhhhh-------hh--ccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 317 SADTYFHPKQQRR-------LL--HQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 317 ~d~~~~~~l~~~~-------~~--~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
.+..|+++.++.| +. ......+++.. +.+++.|+.|||++||+
T Consensus 108 ~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~iv 163 (394)
T 4e7w_A 108 KDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGIC 163 (394)
T ss_dssp SSCEEEEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred CCceEEEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 4555677777665 11 10111244442 78999999999999986
No 211
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=47.42 E-value=1 Score=40.39 Aligned_cols=60 Identities=13% Similarity=0.008 Sum_probs=38.8
Q ss_pred cCcccccCcccc----cccccccccccCchhhhh------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 300 GSKSLNKRPHRR----VNRSASADTYFHPKQQRR------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 300 ~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
.|-.++..++++ +...+.+...+++.++.| .+.....++++.. +..++.|+.|||++||+
T Consensus 73 ~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~iv 146 (331)
T 4aaa_A 73 REIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNII 146 (331)
T ss_dssp HHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHhhCCCCCEeeEEEEeecCCEEEEEEecCCcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCEE
Confidence 455566666665 344666777777777766 1111122255542 88999999999999987
No 212
>1zvf_A 3-hydroxyanthranilate 3,4-dioxygenase; jellyroll beta-barrel, oxidoreductase; 2.41A {Saccharomyces cerevisiae} SCOP: b.82.1.20
Probab=47.26 E-value=46 Score=26.82 Aligned_cols=54 Identities=11% Similarity=0.061 Sum_probs=35.3
Q ss_pred CCCeEEEEEeeEEEEE--e-C----cEEEEEeCCCCeechhhhhcccCCCceeeEEEecceEEEEEEeH
Q psy9025 156 VGKEMYIVKTGQVQVV--S-G----ETVLATLTEGSVFGEISLLALAGTNRRTADVRSHGFSNLFVLNK 217 (361)
Q Consensus 156 ~~~~ly~I~~G~v~v~--~-~----~~~~~~l~~Gd~fGe~~ll~~~~~~~~~~~v~A~~~~~~~~l~~ 217 (361)
+.+.++++++|.+.+. + + ...-..+++||+|=-.. +.+ .+-++..++..+++.+
T Consensus 53 ~~eE~Fy~lkG~m~l~v~d~g~~~~~~~dv~i~eGdmfllP~------gvp--HsP~r~~e~v~lviEr 113 (176)
T 1zvf_A 53 PTPEWFYQKKGSMLLKVVDETDAEPKFIDIIINEGDSYLLPG------NVP--HSPVRFADTVGIVVEQ 113 (176)
T ss_dssp SSCEEEEEEESCEEEEEEECSSSSCEEEEEEECTTEEEEECT------TCC--EEEEECTTCEEEEEEE
T ss_pred CCceEEEEEeCEEEEEEEcCCCcccceeeEEECCCCEEEcCC------CCC--cCCcccCCcEEEEEEe
Confidence 4568999999998886 3 2 24567899999884322 222 2333346677777764
No 213
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=47.03 E-value=0.92 Score=39.96 Aligned_cols=57 Identities=12% Similarity=0.023 Sum_probs=34.9
Q ss_pred CcccccCcccc----cccccccccccCchhhhh-------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 301 SKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 301 ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
|-.++..+.++ +...+.+....++.++.| ++.+.+ +++.. ..+++.|+.|||++||+
T Consensus 70 e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~qi~~~l~~lH~~~i~ 141 (303)
T 3a7i_A 70 EITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP--LDETQIATILREILKGLDYLHSEKKI 141 (303)
T ss_dssp HHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHTTSC--CCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHhCCCCCEeEEEEEEecCCeEEEEEEeCCCCcHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCCc
Confidence 33444444444 233555556666666655 344333 44442 88999999999999986
No 214
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=46.98 E-value=1.9 Score=42.64 Aligned_cols=60 Identities=10% Similarity=-0.014 Sum_probs=39.1
Q ss_pred ccCcccccCcccc-c---ccccccccccCchhhhh-------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRPHRR-V---NRSASADTYFHPKQQRR-------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~~~-~---~~t~~d~~~~~~l~~~~-------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
..|..+|..++++ + ...+.+ ..+++.++.| ++.+....+++.. +.+++.|++|||++||+
T Consensus 384 ~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ii 458 (613)
T 2ozo_A 384 MREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFV 458 (613)
T ss_dssp HHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEE
Confidence 5677888888777 3 334444 3456676665 2332222244442 88999999999999997
No 215
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=46.97 E-value=0.77 Score=40.97 Aligned_cols=59 Identities=12% Similarity=-0.008 Sum_probs=35.8
Q ss_pred cCcccccCcccc----cccccccccccCchhhhh-------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 300 GSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 300 ~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
.|-.++..+.++ +...+.+....++.++.| ++.. ...+++.. +..++.|+.|||++||+
T Consensus 64 ~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~aL~~lH~~~iv 137 (321)
T 2a2a_A 64 REVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQ-KESLSEEEATSFIKQILDGVNYLHTKKIA 137 (321)
T ss_dssp HHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHT-CSCEEHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHhCCCCCcceEEEEEecCCEEEEEEEcCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 344455555554 334566666666676655 2221 11144432 88899999999999986
No 216
>3ebr_A Uncharacterized RMLC-like cupin; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.60A {Ralstonia eutropha JMP134}
Probab=46.94 E-value=25 Score=27.86 Aligned_cols=67 Identities=15% Similarity=0.052 Sum_probs=44.4
Q ss_pred hcceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEEeCcEEEEEeCCCCeechhhhhcccCCCceeeEEEec----ceEEEE
Q psy9025 138 KLRPVLYLPGDYICRKGEVGKEMYIVKTGQVQVVSGETVLATLTEGSVFGEISLLALAGTNRRTADVRSH----GFSNLF 213 (361)
Q Consensus 138 ~l~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~~~~~~~~l~~Gd~fGe~~ll~~~~~~~~~~~v~A~----~~~~~~ 213 (361)
......++||..+-.-.-++...++|++|.......+ ..+.+||++=+. .-...+..+. ++|.|+
T Consensus 43 ~v~lvr~~pG~~~p~H~H~g~ee~~VL~G~~~~~e~~---~~~~~Gd~~~~P--------~g~~H~~~~~~~~~e~~~~~ 111 (159)
T 3ebr_A 43 TITLLKAPAGMEMPRHHHTGTVIVYTVQGSWRYKEHD---WVAHAGSVVYET--------ASTRHTPQSAYAEGPDIITF 111 (159)
T ss_dssp EEEEEEECSSCBCCCEEESSCEEEEEEESCEEETTSS---CCBCTTCEEEEC--------SSEEECEEESSSSSSCEEEE
T ss_pred EEEEEEECCCCCcccccCCCCEEEEEEEeEEEEeCCC---eEECCCeEEEEC--------CCCcceeEeCCCCCCCEEEE
Confidence 3556778999888766666788899999998853221 267788876332 2234455555 678777
Q ss_pred EE
Q psy9025 214 VL 215 (361)
Q Consensus 214 ~l 215 (361)
..
T Consensus 112 ~~ 113 (159)
T 3ebr_A 112 NI 113 (159)
T ss_dssp EE
T ss_pred EE
Confidence 73
No 217
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=46.82 E-value=2.1 Score=37.46 Aligned_cols=60 Identities=7% Similarity=-0.115 Sum_probs=33.8
Q ss_pred cCcccccCcccc-c---ccc-cccccccCchhhhh-------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 300 GSKSLNKRPHRR-V---NRS-ASADTYFHPKQQRR-------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 300 ~ek~i~~~~~~~-~---~~t-~~d~~~~~~l~~~~-------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
.|..++..++++ + ... +.+....++.++.| ++.+....+++.. +.+++.|+.|||++||+
T Consensus 75 ~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~~i~ 150 (298)
T 3f66_A 75 TEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 150 (298)
T ss_dssp HHHHHHHTCCCTTBCCCCEEECCSSSCCEEEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHhCCCCCEeeeeeEEEcCCCceEEEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 444555555555 2 222 33444555565554 2332222233332 67899999999999987
No 218
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=46.50 E-value=1 Score=39.41 Aligned_cols=57 Identities=5% Similarity=0.037 Sum_probs=34.1
Q ss_pred CcccccCcccc----cccccccccccCchhhhh--------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 301 SKSLNKRPHRR----VNRSASADTYFHPKQQRR--------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 301 ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~--------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
|-.++..+.++ +...+.+...+++.++.| +..... +++.. ...++.|++|||++||+
T Consensus 65 e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~--~~~~~~~~i~~qi~~~l~~lH~~~i~ 137 (294)
T 2rku_A 65 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKA--LTEPEARYYLRQIVLGCQYLHRNRVI 137 (294)
T ss_dssp HHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHCS--CCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHhCCCCCEeeeeeeeccCCEEEEEEecCCCCCHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 33344444444 333555666666666655 112122 44442 88999999999999986
No 219
>3d82_A Cupin 2, conserved barrel domain protein; structural genomics, joint center for structural genomics; 2.05A {Shewanella frigidimarina ncimb 400}
Probab=46.10 E-value=58 Score=22.55 Aligned_cols=50 Identities=16% Similarity=0.278 Sum_probs=32.8
Q ss_pred CeEEEEEeeEEEEEeCcEEEEEeCCCCeechhhhhcccCCCceeeEEEecceEEEEEEe
Q psy9025 158 KEMYIVKTGQVQVVSGETVLATLTEGSVFGEISLLALAGTNRRTADVRSHGFSNLFVLN 216 (361)
Q Consensus 158 ~~ly~I~~G~v~v~~~~~~~~~l~~Gd~fGe~~ll~~~~~~~~~~~v~A~~~~~~~~l~ 216 (361)
..+++|.+|.+.+.-++. ...+.+||++=..+ +.+. ...+.+++.++.++
T Consensus 51 ~e~~~v~~G~~~~~~~~~-~~~l~~Gd~~~ip~------~~~H--~~~~~~~~~~l~i~ 100 (102)
T 3d82_A 51 DEVFIVMEGTLQIAFRDQ-NITLQAGEMYVIPK------GVEH--KPMAKEECKIMIIE 100 (102)
T ss_dssp CEEEEEEESEEEEECSSC-EEEEETTEEEEECT------TCCB--EEEEEEEEEEEEEE
T ss_pred cEEEEEEeCEEEEEECCE-EEEEcCCCEEEECC------CCeE--eeEcCCCCEEEEEE
Confidence 789999999999884432 35678998762221 3333 33344678887775
No 220
>2oa2_A BH2720 protein; 10175341, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative, PSI-2, unknow function; HET: MSE; 1.41A {Bacillus halodurans}
Probab=45.78 E-value=56 Score=25.00 Aligned_cols=47 Identities=11% Similarity=0.005 Sum_probs=30.6
Q ss_pred ceEEeCCCCEEEeCCC-CCCeEEEEEeeEEEEE-eCcE----EEEEeCCCCee
Q psy9025 140 RPVLYLPGDYICRKGE-VGKEMYIVKTGQVQVV-SGET----VLATLTEGSVF 186 (361)
Q Consensus 140 ~~~~~~~ge~I~~~G~-~~~~ly~I~~G~v~v~-~~~~----~~~~l~~Gd~f 186 (361)
....+.+|..+-.--- ..+.+++|++|.+.+. ++.. ....+.+||++
T Consensus 46 ~~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~~~i~~~~~~~~~~~~l~~Gd~i 98 (148)
T 2oa2_A 46 TLMSIQVGEDIGLEIHPHLDQFLRVEEGRGLVQMGHRQDNLHFQEEVFDDYAI 98 (148)
T ss_dssp EEEEECTTCBCCCBCCTTCEEEEEEEESEEEEEEESBTTBCCEEEEEETTCEE
T ss_pred EEEEECCCCccCceECCCCcEEEEEEeCEEEEEECCccccceeeEEECCCCEE
Confidence 3456677775532222 2458999999999997 3322 23678999876
No 221
>1fi2_A Oxalate oxidase, germin; beta-jellyroll, oxidoreductase; 1.60A {Hordeum vulgare} SCOP: b.82.1.2 PDB: 2et1_A 2ete_A* 2et7_A
Probab=45.01 E-value=1.2e+02 Score=24.52 Aligned_cols=50 Identities=18% Similarity=0.172 Sum_probs=35.1
Q ss_pred cceEEeCCCCEEEeCCCC-CCeEEEEEeeEEEEE-e------CcEEEEEeCCCCeech
Q psy9025 139 LRPVLYLPGDYICRKGEV-GKEMYIVKTGQVQVV-S------GETVLATLTEGSVFGE 188 (361)
Q Consensus 139 l~~~~~~~ge~I~~~G~~-~~~ly~I~~G~v~v~-~------~~~~~~~l~~Gd~fGe 188 (361)
+....+.+|...-.--.+ ...+++|++|.+.+. . ++.....+.+||+|-.
T Consensus 74 ~~~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~v~~~~~~~~~~~~~~~~l~~GD~~~i 131 (201)
T 1fi2_A 74 MNRVDFAPGGTNPPHIHPRATEIGMVMKGELLVGILGSLDSGNKLYSRVVRAGETFVI 131 (201)
T ss_dssp EEEEEECTTCEEEEEECTTCCEEEEEEESEEEEEEECCGGGTTCEEEEEEETTCEEEE
T ss_pred EEEEEECCCCCCCCeECCCCCEEEEEEeCEEEEEEEcCCCCCCeEEEEEECCCCEEEE
Confidence 445678888865433233 479999999999985 2 3334778999998843
No 222
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=44.93 E-value=3 Score=36.35 Aligned_cols=61 Identities=10% Similarity=-0.054 Sum_probs=33.4
Q ss_pred ccCcccccCcccc----cccccccccccCchhhhh-------hhcc-------CCCCCCCCc----cceeehhhhhhhhc
Q psy9025 299 CGSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQ-------TPTGHNNSF----ECQVTVHREDIHES 356 (361)
Q Consensus 299 ~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~-------~~~~~~~~~----~a~v~~a~~~lH~~ 356 (361)
..|-.++..++++ +...+.+....++.++.| ++.. ....+++.. +..++.|+.|||++
T Consensus 61 ~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~ 140 (303)
T 2vwi_A 61 LKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN 140 (303)
T ss_dssp -----CCCCCCCTTBCCEEEEEESSSCEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhhcCCCCEeeEEEEEeecCCcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 3455666666665 333555555566666554 1110 011144432 78899999999999
Q ss_pred ccc
Q psy9025 357 HIT 359 (361)
Q Consensus 357 ~i~ 359 (361)
||+
T Consensus 141 ~i~ 143 (303)
T 2vwi_A 141 GQI 143 (303)
T ss_dssp TCC
T ss_pred CCC
Confidence 986
No 223
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=44.90 E-value=1.5 Score=41.14 Aligned_cols=39 Identities=21% Similarity=0.116 Sum_probs=26.2
Q ss_pred cccCchhhhh------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 320 TYFHPKQQRR------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 320 ~~~~~l~~~~------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
..+|+.++.| .+. ....+++.. ..+++.|+.|||+.||+
T Consensus 103 ~~~~lv~e~~~~~L~~~~~-~~~~l~~~~~~~i~~qil~aL~~LH~~giv 151 (432)
T 3n9x_A 103 DELYIVLEIADSDLKKLFK-TPIFLTEEHIKTILYNLLLGENFIHESGII 151 (432)
T ss_dssp CCEEEEEECCSEEHHHHHH-SSCCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred CeEEEEEecCCcCHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 4466666655 233 122255553 88999999999999986
No 224
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=44.84 E-value=0.8 Score=45.58 Aligned_cols=59 Identities=12% Similarity=0.128 Sum_probs=37.3
Q ss_pred ccCcccccCcccc----cccccccccccCchhhhh-------hhccCCCCCCCC----ccceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQTPTGHNNS----FECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~~~~~~~~~----~~a~v~~a~~~lH~~~i~ 359 (361)
..|..+|..++++ ++..+.+.. .++.++.| ++... ..+++. ++.+++.|+.|||++||+
T Consensus 418 ~~E~~il~~l~hpnIv~l~~~~~~~~-~~lv~E~~~~g~L~~~l~~~-~~l~~~~~~~i~~qi~~~L~yLH~~~ii 491 (635)
T 4fl3_A 418 LAEANVMQQLDNPYIVRMIGICEAES-WMLVMEMAELGPLNKYLQQN-RHVKDKNIIELVHQVSMGMKYLEESNFV 491 (635)
T ss_dssp HHHHHHHHHCCCTTBCCEEEEEESSS-EEEEEECCTTEEHHHHHHHC-TTCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHhCCCCCEeeEEEEEecCC-EEEEEEccCCCCHHHHHhhC-CCCCHHHHHHHHHHHHHHHHHHHHCCEe
Confidence 5677788887777 333444433 44555555 23211 124444 288999999999999997
No 225
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=44.55 E-value=1.2 Score=39.26 Aligned_cols=43 Identities=19% Similarity=0.040 Sum_probs=27.6
Q ss_pred ccccccccCchhhhh--------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 315 SASADTYFHPKQQRR--------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 315 t~~d~~~~~~l~~~~--------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
.+.+....|+.++.| +....+ +++.- ..+++.|+.|||++||+
T Consensus 74 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~qi~~~l~~lH~~~i~ 128 (304)
T 2jam_A 74 IYESTTHYYLVMQLVSGGELFDRILERGV--YTEKDASLVIQQVLSAVKYLHENGIV 128 (304)
T ss_dssp EEECSSEEEEEECCCCSCBHHHHHHHHSC--CCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred hcccCCEEEEEEEcCCCccHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 455555555565544 222223 44442 78899999999999986
No 226
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=44.34 E-value=38 Score=28.97 Aligned_cols=69 Identities=14% Similarity=-0.008 Sum_probs=42.0
Q ss_pred eEEeCCCCEEEeCC--CCCCeEEEEEeeEEEEEeCcEEEEEeCCCCeechhhhhcccCCCceeeEEEecceEEEEEEe
Q psy9025 141 PVLYLPGDYICRKG--EVGKEMYIVKTGQVQVVSGETVLATLTEGSVFGEISLLALAGTNRRTADVRSHGFSNLFVLN 216 (361)
Q Consensus 141 ~~~~~~ge~I~~~G--~~~~~ly~I~~G~v~v~~~~~~~~~l~~Gd~fGe~~ll~~~~~~~~~~~v~A~~~~~~~~l~ 216 (361)
...+.||...-..- ...+.+++|++|.+.+.-++. ...|++||++-..+ +.+........+++.++.+.
T Consensus 63 ~~~l~pg~~~~~~~~~~~~ee~~~Vl~G~l~~~~~~~-~~~L~~Gd~~~~~~------~~~H~~~N~~~~~~~~l~v~ 133 (261)
T 1rc6_A 63 LVTLHQNGGNQQGFGGEGIETFLYVISGNITAKAEGK-TFALSEGGYLYCPP------GSLMTFVNAQAEDSQIFLYK 133 (261)
T ss_dssp EEEEEEEEEESSCSCCTTEEEEEEEEESEEEEEETTE-EEEEETTEEEEECT------TCCCEEEECSSSCEEEEEEE
T ss_pred EEEEcCCCccCCCCCCCCceEEEEEEEeEEEEEECCE-EEEECCCCEEEECC------CCCEEEEeCCCCCEEEEEEE
Confidence 45567776543221 124679999999999985554 45799999875433 33433333333556666653
No 227
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=44.27 E-value=1.9 Score=38.07 Aligned_cols=17 Identities=12% Similarity=-0.017 Sum_probs=15.9
Q ss_pred cceeehhhhhhhhcccc
Q psy9025 343 ECQVTVHREDIHESHIT 359 (361)
Q Consensus 343 ~a~v~~a~~~lH~~~i~ 359 (361)
...++.|++|||++||+
T Consensus 122 ~~qi~~~l~~lH~~~iv 138 (311)
T 3ork_A 122 IADACQALNFSHQNGII 138 (311)
T ss_dssp HHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHCCCC
Confidence 88999999999999987
No 228
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=43.91 E-value=2.3 Score=37.10 Aligned_cols=17 Identities=18% Similarity=0.159 Sum_probs=15.9
Q ss_pred cceeehhhhhhhhcccc
Q psy9025 343 ECQVTVHREDIHESHIT 359 (361)
Q Consensus 343 ~a~v~~a~~~lH~~~i~ 359 (361)
+..++.|+.|||++||+
T Consensus 126 ~~qi~~~L~~lH~~~i~ 142 (289)
T 3og7_A 126 ARQTARGMDYLHAKSII 142 (289)
T ss_dssp HHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHhCCcc
Confidence 78899999999999987
No 229
>1yfu_A 3-hydroxyanthranilate-3,4-dioxygenase; cupin, oxidoreductase; 1.90A {Cupriavidus metallidurans} SCOP: b.82.1.20 PDB: 1yfw_A* 1yfx_A* 1yfy_A*
Probab=43.70 E-value=32 Score=27.72 Aligned_cols=54 Identities=20% Similarity=0.201 Sum_probs=34.7
Q ss_pred CCCeEEEEEeeEEEEE--e-CcEEEEEeCCCCeechhhhhcccCCCceeeEEEecc-eEEEEEEeH
Q psy9025 156 VGKEMYIVKTGQVQVV--S-GETVLATLTEGSVFGEISLLALAGTNRRTADVRSHG-FSNLFVLNK 217 (361)
Q Consensus 156 ~~~~ly~I~~G~v~v~--~-~~~~~~~l~~Gd~fGe~~ll~~~~~~~~~~~v~A~~-~~~~~~l~~ 217 (361)
+.+.++++++|.+.+. + +......+++||+|=-.. +.+ .+-++.+ ++.++.+.+
T Consensus 54 ~~dE~FyvlkG~m~i~v~d~g~~~~v~l~eGE~f~lP~------gvp--H~P~r~~~e~~~lviE~ 111 (174)
T 1yfu_A 54 PLEEFFYQLRGNAYLNLWVDGRRERADLKEGDIFLLPP------HVR--HSPQRPEAGSACLVIER 111 (174)
T ss_dssp SSCEEEEEEESCEEEEEEETTEEEEEEECTTCEEEECT------TCC--EEEEBCCTTCEEEEEEE
T ss_pred CCceEEEEEeeEEEEEEEcCCceeeEEECCCCEEEeCC------CCC--cCccccCCCCEEEEEEe
Confidence 4679999999999886 3 335567899999884332 222 2333344 566666544
No 230
>2xp1_A SPT6; transcription, IWS1, histone chaperone, mRNA export; 2.20A {Antonospora locustae}
Probab=43.63 E-value=40 Score=27.29 Aligned_cols=37 Identities=19% Similarity=0.270 Sum_probs=30.6
Q ss_pred cCcccccCCHHHHHHHHHhcceEEeCCCCEEEeCCCCCCeEEE
Q psy9025 120 KVQLFQDCDEALLRELVLKLRPVLYLPGDYICRKGEVGKEMYI 162 (361)
Q Consensus 120 ~~~~f~~l~~~~l~~l~~~l~~~~~~~ge~I~~~G~~~~~ly~ 162 (361)
..|.|.+++-.+.++++.. .+|+.|+++...++.+-+
T Consensus 13 ~HP~F~n~s~~qAe~~L~~------~~G~~liRPSsk~~~lti 49 (178)
T 2xp1_A 13 KHPLFKNFNVTESENYLRS------STDDFLIRKGSRHGYCVL 49 (178)
T ss_dssp GSTTEECCCHHHHHHHHHH------SSCCEEEEECSSTTEEEE
T ss_pred cCCCcCCCCHHHHHHHHhc------CCCCEEEeecCCCCcEEE
Confidence 6899999999999888877 259999999888776443
No 231
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=43.59 E-value=0.64 Score=42.06 Aligned_cols=60 Identities=12% Similarity=-0.108 Sum_probs=34.5
Q ss_pred cCcccccCcccc-c---cccccc--------ccccCchhhhh------hhccCCCCCCCCc----cceeehhhhhhhhcc
Q psy9025 300 GSKSLNKRPHRR-V---NRSASA--------DTYFHPKQQRR------LLHQTPTGHNNSF----ECQVTVHREDIHESH 357 (361)
Q Consensus 300 ~ek~i~~~~~~~-~---~~t~~d--------~~~~~~l~~~~------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~ 357 (361)
.|-.++..++++ + ...+.+ ...+|+.++.| .+......+++.- +.+++.|+.|||++|
T Consensus 65 ~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ 144 (351)
T 3mi9_A 65 REIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNK 144 (351)
T ss_dssp HHHHHHHHCCCTTBCCEEEEEEEC--------CEEEEEEECCSEEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHhccCCCcccHhheeeccccccccCCceEEEEEeccCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 455566666555 2 222222 33456666655 2222222244442 888999999999999
Q ss_pred cc
Q psy9025 358 IT 359 (361)
Q Consensus 358 i~ 359 (361)
|+
T Consensus 145 iv 146 (351)
T 3mi9_A 145 IL 146 (351)
T ss_dssp EE
T ss_pred ee
Confidence 86
No 232
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=43.19 E-value=3.9 Score=36.18 Aligned_cols=61 Identities=5% Similarity=-0.191 Sum_probs=38.3
Q ss_pred ccCcccccCcccc----cccccccccccCchhhhh-------hhccCC---CCCCCC----ccceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQTP---TGHNNS----FECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~~~---~~~~~~----~~a~v~~a~~~lH~~~i~ 359 (361)
..|-.++..++++ +...+.+....++.++.| .+.+.. ..+++. ++..++.|+.|||++||+
T Consensus 83 ~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~iv 161 (321)
T 2qkw_B 83 ETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAII 161 (321)
T ss_dssp HHHHHGGGSCCCTTBCCEEEECCCTTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCee
Confidence 4566677777766 334666677777777765 122111 012222 177889999999999986
No 233
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=42.92 E-value=2.6 Score=38.39 Aligned_cols=60 Identities=7% Similarity=-0.010 Sum_probs=36.0
Q ss_pred cCcccccCcccc----cccccccccccCchhhhh-------hhcc-CC-----CCCCCC----ccceeehhhhhhhhccc
Q psy9025 300 GSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQ-TP-----TGHNNS----FECQVTVHREDIHESHI 358 (361)
Q Consensus 300 ~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~-~~-----~~~~~~----~~a~v~~a~~~lH~~~i 358 (361)
.|..++..++++ +...+.+....++.++.| ++.. .+ ..+++. ++.+++.|+.|||++||
T Consensus 123 ~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i 202 (367)
T 3l9p_A 123 MEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHF 202 (367)
T ss_dssp HHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHhCCCCCCCeEEEEEecCCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCe
Confidence 345555555555 334566666667777666 1221 11 112222 27889999999999999
Q ss_pred c
Q psy9025 359 T 359 (361)
Q Consensus 359 ~ 359 (361)
+
T Consensus 203 v 203 (367)
T 3l9p_A 203 I 203 (367)
T ss_dssp C
T ss_pred e
Confidence 7
No 234
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=42.86 E-value=73 Score=28.51 Aligned_cols=50 Identities=18% Similarity=0.150 Sum_probs=35.6
Q ss_pred cceEEeCCCCEEEeCCCCC-CeEEEEEeeEEEEEe----CcEEEEEeCCCCeech
Q psy9025 139 LRPVLYLPGDYICRKGEVG-KEMYIVKTGQVQVVS----GETVLATLTEGSVFGE 188 (361)
Q Consensus 139 l~~~~~~~ge~I~~~G~~~-~~ly~I~~G~v~v~~----~~~~~~~l~~Gd~fGe 188 (361)
+....+.+|..+-..-.+. ..+++|++|.+.+.- ++.....+.+||+|=.
T Consensus 236 ~~~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~~~v~~~~g~~~~~~l~~GD~~~i 290 (361)
T 2vqa_A 236 GALIHLEPGAMRQLHWHPNADEWQYVLDGEMDLTVFASEGKASVSRLQQGDVGYV 290 (361)
T ss_dssp EEEEEECTTCEEEEEECSSCCEEEEEEESCEEEEEECSTTCEEEEEECTTCEEEE
T ss_pred EEEEEECCCcccccccCCCCCEEEEEEeCEEEEEEEcCCCcEEEEEECCCCEEEE
Confidence 4466778888765433344 799999999999862 3335678999998843
No 235
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=42.59 E-value=89 Score=28.28 Aligned_cols=71 Identities=10% Similarity=-0.080 Sum_probs=43.6
Q ss_pred cceEEeCCCCEEEeCCCCC-CeEEEEEeeEEEEE-e--Cc-EEEEEeCCCCeechhhhhcccCCCceeeEEEecceEEEE
Q psy9025 139 LRPVLYLPGDYICRKGEVG-KEMYIVKTGQVQVV-S--GE-TVLATLTEGSVFGEISLLALAGTNRRTADVRSHGFSNLF 213 (361)
Q Consensus 139 l~~~~~~~ge~I~~~G~~~-~~ly~I~~G~v~v~-~--~~-~~~~~l~~Gd~fGe~~ll~~~~~~~~~~~v~A~~~~~~~ 213 (361)
+....+.+|...-..-... ..+++|++|.+.+. + +. .....+.+||+|=..+ +.+........+++.++
T Consensus 259 ~~~~~l~pG~~~~~h~H~~~~E~~~Vl~G~~~~~i~~~~g~~~~~~l~~GD~~~ip~------~~~H~~~n~~~~~~~~l 332 (385)
T 1j58_A 259 SALVTVEPGAMRELHWHPNTHEWQYYISGKARMTVFASDGHARTFNYQAGDVGYVPF------AMGHYVENIGDEPLVFL 332 (385)
T ss_dssp EEEEEECTTCEEEEEECSSSCEEEEEEESEEEEEEEEETTEEEEEEEESSCEEEECT------TCBEEEEECSSSCEEEE
T ss_pred EEEEEECCCcccCceeCCCCCEEEEEEeCeEEEEEEcCCCcEEEEEEcCCCEEEECC------CCeEEEEECCCCCEEEE
Confidence 3455678887765433344 78999999999887 2 22 3567899999874332 23333322233456666
Q ss_pred EE
Q psy9025 214 VL 215 (361)
Q Consensus 214 ~l 215 (361)
.+
T Consensus 333 ~v 334 (385)
T 1j58_A 333 EI 334 (385)
T ss_dssp EE
T ss_pred EE
Confidence 55
No 236
>2vec_A YHAK, pirin-like protein YHAK; ROS, bicupin, sulfenic acid, reactive cysteine, cytosolic protein; 1.85A {Escherichia coli}
Probab=42.49 E-value=1.6e+02 Score=25.17 Aligned_cols=67 Identities=9% Similarity=0.051 Sum_probs=42.5
Q ss_pred EEeCCCCEEEeCCCCCCeEEEEEeeEEEEEeCcEEEEEeCCCCeechhhhhcccCCCceeeEEEecceEEEEEEe
Q psy9025 142 VLYLPGDYICRKGEVGKEMYIVKTGQVQVVSGETVLATLTEGSVFGEISLLALAGTNRRTADVRSHGFSNLFVLN 216 (361)
Q Consensus 142 ~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~~~~~~~~l~~Gd~fGe~~ll~~~~~~~~~~~v~A~~~~~~~~l~ 216 (361)
..+.+|+.+--.-.....+.+|.+|.+.+-+...-...+.+||... +. .....++.|.++++++.++
T Consensus 187 ~~L~~g~~~~~~~~~~~~~l~v~~G~v~v~g~~~~~~~l~~gd~~~----l~----~~~~l~l~a~~~a~~LL~d 253 (256)
T 2vec_A 187 IVLDKGESANFQLHGPRAYLQSIHGKFHALTHHEEKAALTCGDGAF----IR----DEANITLVADSPLRALLID 253 (256)
T ss_dssp EEECTTCEEEEECSSSEEEEEEEESCEEEEETTEEEEEECTTCEEE----EE----SCSEEEEEESSSEEEEEEE
T ss_pred EEECCCCEEEEecCCCeEEEEEEECEEEECCccccceEECCCCEEE----EC----CCCeEEEEeCCCCEEEEEE
Confidence 4577888775543333355667899999875432233577887553 22 2234577788889988876
No 237
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=42.43 E-value=1.6 Score=38.62 Aligned_cols=58 Identities=14% Similarity=0.075 Sum_probs=35.8
Q ss_pred cCcccccCcccc----cccccccccccCchhhhh-------hh-ccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 300 GSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LL-HQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 300 ~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~-~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
.|..++..+.++ +...+.+...+|+.++.| ++ ...+ +++.. +..++.|+.|||++||+
T Consensus 83 ~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~i~~qi~~~l~~lH~~~i~ 156 (309)
T 2h34_A 83 REARTAGRLQEPHVVPIHDFGEIDGQLYVDMRLINGVDLAAMLRRQGP--LAPPRAVAIVRQIGSALDAAHAAGAT 156 (309)
T ss_dssp HHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCCCEEHHHHHHHHCS--CCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHhhcCCCCeeEEEEEEeeCCeEEEEEEecCCCCHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCcCC
Confidence 344555555555 333555566666666655 12 2223 44442 88899999999999986
No 238
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=42.13 E-value=1.2 Score=39.16 Aligned_cols=59 Identities=8% Similarity=-0.048 Sum_probs=33.7
Q ss_pred CcccccCcccc----cccccccccccCchhhhh-------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 301 SKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 301 ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
|-.++..+.++ +...+.+....++.++.| ++......+++.. ...++.|+.|||++||+
T Consensus 66 e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~ 139 (302)
T 2j7t_A 66 EIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRII 139 (302)
T ss_dssp HHHHHHHCCCTTBCCEEEEEECC-CEEEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcCCcc
Confidence 33444444444 233445555666666655 1221122255542 78899999999999986
No 239
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=42.06 E-value=2.3 Score=37.01 Aligned_cols=17 Identities=24% Similarity=0.149 Sum_probs=15.7
Q ss_pred cceeehhhhhhhhcccc
Q psy9025 343 ECQVTVHREDIHESHIT 359 (361)
Q Consensus 343 ~a~v~~a~~~lH~~~i~ 359 (361)
+.+++.|+.|||++||+
T Consensus 130 ~~qi~~~l~~LH~~~i~ 146 (298)
T 3pls_A 130 GLQVARGMEYLAEQKFV 146 (298)
T ss_dssp HHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHhCCcc
Confidence 77899999999999987
No 240
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=42.02 E-value=53 Score=28.66 Aligned_cols=56 Identities=16% Similarity=0.226 Sum_probs=36.9
Q ss_pred CCCCCeEEEEEeeEEEEE--e-CcEEEEEeCCCCeechhhhhcccCCCceeeEEEecceEEEEEEeH
Q psy9025 154 GEVGKEMYIVKTGQVQVV--S-GETVLATLTEGSVFGEISLLALAGTNRRTADVRSHGFSNLFVLNK 217 (361)
Q Consensus 154 G~~~~~ly~I~~G~v~v~--~-~~~~~~~l~~Gd~fGe~~ll~~~~~~~~~~~v~A~~~~~~~~l~~ 217 (361)
-+..+.+|++.+|.+.+. . +...-..+++|++|=-.. .-..+=++.++|..++|.+
T Consensus 48 ~~~~dE~FyqlkG~m~l~~~d~g~~~~V~i~eGemfllP~--------gv~HsP~r~~et~gLviE~ 106 (286)
T 2qnk_A 48 IEEGEEVFYQLEGDMVLRVLEQGKHRDVVIRQGEIFLLPA--------RVPHSPQRFANTVGLVVER 106 (286)
T ss_dssp ECSSCEEEEEEESCEEEEEEETTEEEEEEECTTEEEEECT--------TCCEEEEECTTCEEEEEEE
T ss_pred CCCCCeEEEEEeCeEEEEEEeCCceeeEEECCCeEEEeCC--------CCCcCCcccCCeEEEEEee
Confidence 345789999999998876 4 335557789999884322 2233344456777777764
No 241
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=41.84 E-value=1.4 Score=40.01 Aligned_cols=59 Identities=10% Similarity=0.086 Sum_probs=35.0
Q ss_pred ccCcccccCc-ccc----cccccccccccCchhhhh--------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRP-HRR----VNRSASADTYFHPKQQRR--------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~-~~~----~~~t~~d~~~~~~l~~~~--------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
..|..++..+ .++ +...+.+...+++.++.| +....+ +++.. ..+++.|+.|||++||+
T Consensus 106 ~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~qi~~aL~~LH~~~iv 181 (355)
T 1vzo_A 106 RTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRER--FTEHEVQIYVGEIVLALEHLHKLGII 181 (355)
T ss_dssp CCHHHHHHHHHTCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHHHHSC--CCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHccCCCceeEEEEEEeeCceEEEEeecCCCCCHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 3444444444 233 233555566666666655 222223 44442 67899999999999997
No 242
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=41.70 E-value=1.1 Score=38.81 Aligned_cols=57 Identities=9% Similarity=-0.033 Sum_probs=33.5
Q ss_pred CcccccCcccc----cccccccccccCchhhhh--------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 301 SKSLNKRPHRR----VNRSASADTYFHPKQQRR--------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 301 ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~--------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
|-.++..+.++ +...+.+....++.++.| +..+.+ +++.. +..++.|+.|||++||+
T Consensus 58 E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~i~~~l~~lH~~~i~ 130 (283)
T 3bhy_A 58 EVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES--LTEDEATQFLKQILDGVHYLHSKRIA 130 (283)
T ss_dssp HHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSS--CCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHhCCCCCeeehhheecCCCeEEEEEeecCCCcHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 44444444444 233455555555565544 222223 44442 88899999999999986
No 243
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=41.64 E-value=71 Score=29.40 Aligned_cols=79 Identities=18% Similarity=0.161 Sum_probs=49.9
Q ss_pred ceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEEeCcEEEEEeCCCCeechhhhhcccCCCceeeEEEe-cceEEEEEEeHH
Q psy9025 140 RPVLYLPGDYICRKGEVGKEMYIVKTGQVQVVSGETVLATLTEGSVFGEISLLALAGTNRRTADVRS-HGFSNLFVLNKD 218 (361)
Q Consensus 140 ~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~~~~~~~~l~~Gd~fGe~~ll~~~~~~~~~~~v~A-~~~~~~~~l~~~ 218 (361)
....+.||...-.--...+.+|+|++|...+.-++ ....+++||+|=... +......-.. .+++.++.++-.
T Consensus 297 ~~~~l~PG~~~~~HrH~~~~v~~VleG~G~~~V~g-e~~~~~~GD~~~iP~------g~~H~~~N~g~~e~~~ll~i~D~ 369 (394)
T 3bu7_A 297 SMQMLRPGEHTKAHRHTGNVIYNVAKGQGYSIVGG-KRFDWSEHDIFCVPA------WTWHEHCNTQERDDACLFSFNDF 369 (394)
T ss_dssp EEEEECTTCBCCCEEESSCEEEEEEECCEEEEETT-EEEEECTTCEEEECT------TCCEEEEECCSSCCEEEEEEESH
T ss_pred EEEEECCCCcCCCcccCCcEEEEEEeCeEEEEECC-EEEEEeCCCEEEECC------CCeEEeEeCCCCCCeEEEEeeCH
Confidence 45567777776554445678999999998766443 356789999884433 2222222222 357888888766
Q ss_pred HHHHHHH
Q psy9025 219 DLNEAIE 225 (361)
Q Consensus 219 ~f~~ll~ 225 (361)
-+...+.
T Consensus 370 Pl~~~Lg 376 (394)
T 3bu7_A 370 PVMEKLG 376 (394)
T ss_dssp HHHHHTT
T ss_pred HHHHHhh
Confidence 6655443
No 244
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=41.38 E-value=1.2 Score=38.43 Aligned_cols=58 Identities=12% Similarity=-0.048 Sum_probs=34.1
Q ss_pred CcccccCcccc----cccccccccccCchhhhh-------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 301 SKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 301 ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
|..++..+.++ +...+.++...|+.++.| .+.. ...+++.. +.+++.|++|||++||+
T Consensus 55 e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~ 127 (276)
T 2yex_A 55 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLHGIGIT 127 (276)
T ss_dssp HHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEEGGGGSBT-TTBCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHhcCCCCceeeeeEEEcCCEEEEEEEecCCCcHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 44444444444 333555666666666655 1221 11144332 88899999999999986
No 245
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=41.36 E-value=38 Score=29.36 Aligned_cols=70 Identities=11% Similarity=-0.015 Sum_probs=44.7
Q ss_pred cceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEEeC-cEEEEEeCCCCeechhhhhcccCCCceeeEEEecceEEEEEEeH
Q psy9025 139 LRPVLYLPGDYICRKGEVGKEMYIVKTGQVQVVSG-ETVLATLTEGSVFGEISLLALAGTNRRTADVRSHGFSNLFVLNK 217 (361)
Q Consensus 139 l~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~~-~~~~~~l~~Gd~fGe~~ll~~~~~~~~~~~v~A~~~~~~~~l~~ 217 (361)
+-...+.||..--.....++.+.+|++|.+.+.-+ +. ...+.+||+|=..+ +.+. ++...+++.++.+.+
T Consensus 72 ~~lv~l~PGg~s~~~~h~~EEfiyVleG~l~l~l~~g~-~~~L~~Gds~y~p~------~~~H--~~~N~~~Ar~l~V~k 142 (266)
T 4e2q_A 72 MYLAKMKEMSSSGLPPQDIERLIFVVEGAVTLTNTSSS-SKKLTVDSYAYLPP------NFHH--SLDCVESATLVVFER 142 (266)
T ss_dssp EEEEEECSSEECCCCCTTEEEEEEEEEECEEEEC--CC-CEEECTTEEEEECT------TCCC--EEEESSCEEEEEEEE
T ss_pred EEEEEECcCCcCCCCCCCCeEEEEEEEEEEEEEECCCc-EEEEcCCCEEEECC------CCCE--EEEeCCCEEEEEEEe
Confidence 34566778776322233457899999999999844 32 35799999874433 2222 333457888888854
No 246
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=41.10 E-value=1.6 Score=41.22 Aligned_cols=61 Identities=8% Similarity=0.016 Sum_probs=37.6
Q ss_pred ccCcccccCcccc-ccc---ccccc-cccCchhhhh-------hhccCC-CCCCCC----ccceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRPHRR-VNR---SASAD-TYFHPKQQRR-------LLHQTP-TGHNNS----FECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~~~-~~~---t~~d~-~~~~~l~~~~-------~~~~~~-~~~~~~----~~a~v~~a~~~lH~~~i~ 359 (361)
..|..+|..++++ +.+ .+.+. ..+|+.++.| ++++.. ..+++. ++.+++.|++|||++||+
T Consensus 234 ~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~iv 311 (450)
T 1k9a_A 234 LAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFV 311 (450)
T ss_dssp HHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 5677788887777 332 33233 3566666655 222111 113443 288999999999999986
No 247
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=40.64 E-value=1.5 Score=39.71 Aligned_cols=17 Identities=6% Similarity=0.024 Sum_probs=16.0
Q ss_pred cceeehhhhhhhhcccc
Q psy9025 343 ECQVTVHREDIHESHIT 359 (361)
Q Consensus 343 ~a~v~~a~~~lH~~~i~ 359 (361)
+.+++.|+.|||++||+
T Consensus 143 ~~qi~~aL~~LH~~~iv 159 (360)
T 3llt_A 143 CIEILKALNYLRKMSLT 159 (360)
T ss_dssp HHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHHHHHHCCee
Confidence 88999999999999986
No 248
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=40.47 E-value=2.5 Score=37.44 Aligned_cols=17 Identities=0% Similarity=0.024 Sum_probs=15.7
Q ss_pred cceeehhhhhhhhcccc
Q psy9025 343 ECQVTVHREDIHESHIT 359 (361)
Q Consensus 343 ~a~v~~a~~~lH~~~i~ 359 (361)
+.+++.|+.|||++||+
T Consensus 144 ~~qi~~~l~~lH~~~i~ 160 (322)
T 1p4o_A 144 AGEIADGMAYLNANKFV 160 (322)
T ss_dssp HHHHHHHHHHHHHTTCB
T ss_pred HHHHHHHHHHHHHCCCc
Confidence 77899999999999997
No 249
>3ht1_A REMF protein; cupin fold, Zn-binding, antibiotic biosynthesis, resistomycin, metalloprotein, cyclase, lyase; 1.20A {Streptomyces resistomycificus} PDB: 3ht2_A
Probab=40.31 E-value=38 Score=25.50 Aligned_cols=44 Identities=11% Similarity=-0.030 Sum_probs=27.7
Q ss_pred EeCCCCEEEeCCCCCCeEEEEEeeEEEEE--eCcEEEEEeCCCCeec
Q psy9025 143 LYLPGDYICRKGEVGKEMYIVKTGQVQVV--SGETVLATLTEGSVFG 187 (361)
Q Consensus 143 ~~~~ge~I~~~G~~~~~ly~I~~G~v~v~--~~~~~~~~l~~Gd~fG 187 (361)
.+.+|..+-.---....+++|++|.+.+. -++ ....+.+||++=
T Consensus 45 ~~~pg~~~~~H~H~~~e~~~vl~G~~~~~~~~~~-~~~~l~~Gd~~~ 90 (145)
T 3ht1_A 45 EVSPNGSTPPHFHEWEHEIYVLEGSMGLVLPDQG-RTEEVGPGEAIF 90 (145)
T ss_dssp EEEEEEECCCEECSSCEEEEEEEECEEEEEGGGT-EEEEECTTCEEE
T ss_pred EECCCCcCCCccCCCceEEEEEEeEEEEEEeECC-EEEEECCCCEEE
Confidence 34455443222223455677999999988 554 456799999763
No 250
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=40.27 E-value=1.2 Score=40.47 Aligned_cols=58 Identities=9% Similarity=0.004 Sum_probs=35.1
Q ss_pred cCcccccCcccc----cccccccccccCchhhhh------hh--ccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 300 GSKSLNKRPHRR----VNRSASADTYFHPKQQRR------LL--HQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 300 ~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~------~~--~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
.|-.++..++++ +...+.+....++.++.| .+ ++.+ +++.. +..++.|+.|||++||+
T Consensus 103 ~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~g~l~~~l~~~~~~--l~~~~~~~i~~qi~~aL~~LH~~~iv 176 (348)
T 1u5q_A 103 KEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKP--LQEVEIAAVTHGALQGLAYLHSHNMI 176 (348)
T ss_dssp HHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHHTSC--CCHHHHHHHHHHHHHHHHHHHHTTCB
T ss_pred HHHHHHHhCCCCCEeeEEEEEEECCeEEEEEecCCCCHHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 344445555554 233455556666666655 12 2223 55542 77899999999999987
No 251
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=40.17 E-value=3.1 Score=36.73 Aligned_cols=17 Identities=18% Similarity=0.196 Sum_probs=15.9
Q ss_pred cceeehhhhhhhhcccc
Q psy9025 343 ECQVTVHREDIHESHIT 359 (361)
Q Consensus 343 ~a~v~~a~~~lH~~~i~ 359 (361)
+..++.|+.|||++||+
T Consensus 138 ~~qi~~~L~~LH~~~iv 154 (307)
T 3lb7_A 138 ARQTAQGMDYLHAKNII 154 (307)
T ss_dssp HHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHhCCEe
Confidence 78899999999999987
No 252
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=39.21 E-value=1.4 Score=38.70 Aligned_cols=17 Identities=6% Similarity=0.048 Sum_probs=15.8
Q ss_pred cceeehhhhhhhhcccc
Q psy9025 343 ECQVTVHREDIHESHIT 359 (361)
Q Consensus 343 ~a~v~~a~~~lH~~~i~ 359 (361)
+.+++.|+.|||++||+
T Consensus 132 ~~~i~~~l~~lH~~~i~ 148 (302)
T 4e5w_A 132 AVQICKGMDYLGSRQYV 148 (302)
T ss_dssp HHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHHHhhcCCcc
Confidence 78999999999999986
No 253
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=39.20 E-value=2.6 Score=39.09 Aligned_cols=17 Identities=12% Similarity=0.085 Sum_probs=15.9
Q ss_pred cceeehhhhhhhhcccc
Q psy9025 343 ECQVTVHREDIHESHIT 359 (361)
Q Consensus 343 ~a~v~~a~~~lH~~~i~ 359 (361)
..+++.|+.|||++||+
T Consensus 167 ~~qi~~aL~~LH~~~iv 183 (400)
T 1nxk_A 167 MKSIGEAIQYLHSINIA 183 (400)
T ss_dssp HHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHHHHHHCCcc
Confidence 88899999999999987
No 254
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=39.10 E-value=1.4e+02 Score=25.57 Aligned_cols=48 Identities=13% Similarity=0.092 Sum_probs=34.6
Q ss_pred cceEEeCCCCEEEe-CCCCCCeEEEEEeeEEEEEeCcEEEEEeCCCCeec
Q psy9025 139 LRPVLYLPGDYICR-KGEVGKEMYIVKTGQVQVVSGETVLATLTEGSVFG 187 (361)
Q Consensus 139 l~~~~~~~ge~I~~-~G~~~~~ly~I~~G~v~v~~~~~~~~~l~~Gd~fG 187 (361)
+....+.+|..+-. .--....+++|++|.+.+.-++. ...+.+||++=
T Consensus 184 ~~~~~l~pg~~~~~~H~H~~~E~~yVl~G~~~~~i~~~-~~~l~~GD~i~ 232 (274)
T 1sef_A 184 MHILSFEPGASHAYIETHVQEHGAYLISGQGMYNLDNE-WYPVEKGDYIF 232 (274)
T ss_dssp EEEEEECTTCBCSSCBCCSCCEEEEEEECEEEEEETTE-EEEEETTCEEE
T ss_pred EEEEEECCCCccCcceeccCeEEEEEEeCEEEEEECCE-EEEECCCCEEE
Confidence 44556788887633 23356789999999999985553 36789999873
No 255
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=38.91 E-value=3.2 Score=38.07 Aligned_cols=17 Identities=12% Similarity=0.067 Sum_probs=15.8
Q ss_pred cceeehhhhhhhhcccc
Q psy9025 343 ECQVTVHREDIHESHIT 359 (361)
Q Consensus 343 ~a~v~~a~~~lH~~~i~ 359 (361)
..+++.|+.|||+.||+
T Consensus 115 ~~qi~~~L~~LH~~~iv 131 (388)
T 3oz6_A 115 VYQLIKVIKYLHSGGLL 131 (388)
T ss_dssp HHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHHHHHhCCEE
Confidence 77999999999999986
No 256
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=38.44 E-value=2.2 Score=37.97 Aligned_cols=17 Identities=6% Similarity=0.124 Sum_probs=15.9
Q ss_pred cceeehhhhhhhhcccc
Q psy9025 343 ECQVTVHREDIHESHIT 359 (361)
Q Consensus 343 ~a~v~~a~~~lH~~~i~ 359 (361)
+..++.|+.|||++||+
T Consensus 148 ~~qi~~aL~~LH~~~iv 164 (327)
T 1fvr_A 148 AADVARGMDYLSQKQFI 164 (327)
T ss_dssp HHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHHHHHhCCcc
Confidence 88999999999999986
No 257
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=38.19 E-value=2 Score=40.29 Aligned_cols=60 Identities=12% Similarity=0.083 Sum_probs=35.3
Q ss_pred cCcccccC-cccc----cccccccccccCchhhhh------hhccCCCC------CCCC----ccceeehhhhhhhhccc
Q psy9025 300 GSKSLNKR-PHRR----VNRSASADTYFHPKQQRR------LLHQTPTG------HNNS----FECQVTVHREDIHESHI 358 (361)
Q Consensus 300 ~ek~i~~~-~~~~----~~~t~~d~~~~~~l~~~~------~~~~~~~~------~~~~----~~a~v~~a~~~lH~~~i 358 (361)
.|..++.. .+++ ++..+.+..++|+.++.| ++...... ..+. ++.+++.|++|||++||
T Consensus 57 ~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i 136 (434)
T 2rio_A 57 MEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKI 136 (434)
T ss_dssp HHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCSEEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCCCCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCc
Confidence 34444444 2444 344667777788888776 22211100 1111 37899999999999998
Q ss_pred c
Q psy9025 359 T 359 (361)
Q Consensus 359 ~ 359 (361)
+
T Consensus 137 v 137 (434)
T 2rio_A 137 I 137 (434)
T ss_dssp E
T ss_pred c
Confidence 7
No 258
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=37.93 E-value=2.4 Score=37.09 Aligned_cols=61 Identities=15% Similarity=0.066 Sum_probs=33.0
Q ss_pred ccCcccccCcccc-c---cccc--ccccccCchhhhh------hhccC-CCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRPHRR-V---NRSA--SADTYFHPKQQRR------LLHQT-PTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~~~-~---~~t~--~d~~~~~~l~~~~------~~~~~-~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
..|-.++..++++ + ...+ .+...+++.++.| .+... ...+++.. ..+++.|+.|||++||+
T Consensus 54 ~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~ 131 (305)
T 2wtk_C 54 KKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIV 131 (305)
T ss_dssp HHHHHHHTTCCCTTBCCEEEEEECC---CEEEEEECCSEEHHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHhcCCCCeeEEEEEEEcCCCCeEEEEehhccCCHHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 3444555555554 2 2233 3444566666655 12211 11144442 77899999999999986
No 259
>3ouf_A Potassium channel protein; ION channel, membrane, membrane protein; 1.55A {Bacillus cereus} PDB: 3t4z_A 3tcu_A 3t1c_A 3tet_A 3t4d_A 3t2m_A 3e86_A 3e83_A 3e89_A 3e8b_A 3e8f_A 3e8g_A 3e8h_A 3k0d_A 3k0g_A 3k06_A 3k08_A 3k04_A 3k03_A
Probab=37.56 E-value=1.9 Score=31.31 Aligned_cols=35 Identities=9% Similarity=-0.043 Sum_probs=27.1
Q ss_pred eecCCCCccccc---ceeecceeeeehhhHHHHHhhhh
Q psy9025 3 IYPRNNETEANT---WLRKESVPEQVRGDIESGVDEDE 37 (361)
Q Consensus 3 ~~~~~~~~~~~~---~l~g~~vfayiiG~i~s~~~~~~ 37 (361)
++|.+...+..+ +++|.+++++.+|.++..+...+
T Consensus 52 i~P~t~~gr~~~~~~~~~G~~~~~~~i~~i~~~~~~~~ 89 (97)
T 3ouf_A 52 FSPQTDFGKIFTILYIFIGIGLVFGFIHKLAVNVQLPS 89 (97)
T ss_dssp SCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHH
T ss_pred CCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 467777666553 67899999999999998876543
No 260
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=37.45 E-value=42 Score=29.20 Aligned_cols=69 Identities=7% Similarity=0.032 Sum_probs=41.0
Q ss_pred eEEeCCCCEEEe--CCCCCCeEEEEEeeEEEEEeCcEEEEEeCCCCeechhhhhcccCCCceeeEEEecceEEEEEEe
Q psy9025 141 PVLYLPGDYICR--KGEVGKEMYIVKTGQVQVVSGETVLATLTEGSVFGEISLLALAGTNRRTADVRSHGFSNLFVLN 216 (361)
Q Consensus 141 ~~~~~~ge~I~~--~G~~~~~ly~I~~G~v~v~~~~~~~~~l~~Gd~fGe~~ll~~~~~~~~~~~v~A~~~~~~~~l~ 216 (361)
...+.||...-. .....+.+++|++|.+.+.-++. ...+.+||++=..+ +.+........+++.++.+-
T Consensus 72 ~~~l~PG~~~~~~~h~H~~eE~~~Vl~G~l~v~v~g~-~~~L~~GD~i~ip~------~~~H~~~N~g~~~~~~l~v~ 142 (278)
T 1sq4_A 72 IVELAPNGGSDKPEQDPNAEAVLFVVEGELSLTLQGQ-VHAMQPGGYAFIPP------GADYKVRNTTGQHTRFHWIR 142 (278)
T ss_dssp EEEEEEEEEESSCCCCTTEEEEEEEEESCEEEEESSC-EEEECTTEEEEECT------TCCEEEECCSSSCEEEEEEE
T ss_pred EEEECCCCccCCCCcCCCceEEEEEEeCEEEEEECCE-EEEECCCCEEEECC------CCcEEEEECCCCCEEEEEEE
Confidence 455667765511 12335789999999999985443 35799999873322 33333322233456666653
No 261
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=36.73 E-value=24 Score=32.59 Aligned_cols=48 Identities=6% Similarity=-0.038 Sum_probs=34.1
Q ss_pred ceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEEeCcEEEEEeCCCCeec
Q psy9025 140 RPVLYLPGDYICRKGEVGKEMYIVKTGQVQVVSGETVLATLTEGSVFG 187 (361)
Q Consensus 140 ~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~~~~~~~~l~~Gd~fG 187 (361)
....+.||+.+-.---....+|||++|.-..+.-+.....+++||+|=
T Consensus 126 ~~~~l~PG~~~~~HrH~~~ev~~IleG~G~~t~v~G~~~~~~~GD~i~ 173 (394)
T 3bu7_A 126 GIQTMKAGERAGAHRHAASALRFIMEGSGAYTIVDGHKVELGANDFVL 173 (394)
T ss_dssp EEEEECTTCBCCCEEESSCEEEEEEECSCEEEEETTEEEEECTTCEEE
T ss_pred EEEEECCCCCcCCccCCcceEEEEEEeeEEEEEECCEEEEEcCCCEEE
Confidence 677889998886554455689999999875532222246789999883
No 262
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=36.09 E-value=55 Score=29.60 Aligned_cols=75 Identities=9% Similarity=-0.019 Sum_probs=45.8
Q ss_pred cceEEeCCCCEEEeCCCCCCeEEEEEeeEEEE-EeCcEEEEEeCCCCeechhhhhcccCCCceeeEEEecceEEEEEEeH
Q psy9025 139 LRPVLYLPGDYICRKGEVGKEMYIVKTGQVQV-VSGETVLATLTEGSVFGEISLLALAGTNRRTADVRSHGFSNLFVLNK 217 (361)
Q Consensus 139 l~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v-~~~~~~~~~l~~Gd~fGe~~ll~~~~~~~~~~~v~A~~~~~~~~l~~ 217 (361)
+....+.||...-.--.....+++|++|...+ .-++ ....+++||+|=..+ +.+........+++.++.+..
T Consensus 102 ~~~~~l~PG~~~~~H~H~~~e~~yVl~G~g~~t~v~g-~~~~l~~GD~~~iP~------g~~H~~~n~~~~~~~~l~v~d 174 (354)
T 2d40_A 102 AGLQLIMPGEVAPSHRHNQSALRFIVEGKGAFTAVDG-ERTPMNEGDFILTPQ------WRWHDHGNPGDEPVIWLDGLD 174 (354)
T ss_dssp EEEEEECTTCEEEEEEESSCEEEEEEECSSCEEEETT-EEEECCTTCEEEECT------TSCEEEECCSSSCEEEEEEEC
T ss_pred EEEEEECCCCCcCCeecCcceEEEEEEEEEEEEEECC-EEEEEcCCCEEEECC------CCcEEeEeCCCCCEEEEEEEC
Confidence 44667888887644334567999999999866 3333 346799999884322 333333222334566666654
Q ss_pred HHH
Q psy9025 218 DDL 220 (361)
Q Consensus 218 ~~f 220 (361)
..+
T Consensus 175 ~p~ 177 (354)
T 2d40_A 175 LPL 177 (354)
T ss_dssp HHH
T ss_pred chh
Confidence 333
No 263
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=35.77 E-value=40 Score=31.67 Aligned_cols=50 Identities=14% Similarity=0.117 Sum_probs=37.7
Q ss_pred cceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEE---eCcEEEEEeCCCCeech
Q psy9025 139 LRPVLYLPGDYICRKGEVGKEMYIVKTGQVQVV---SGETVLATLTEGSVFGE 188 (361)
Q Consensus 139 l~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~---~~~~~~~~l~~Gd~fGe 188 (361)
+....+.||..+-..--.++.+++|++|.+.+. .+......+.+||++-.
T Consensus 88 ~~~~~l~Pgg~~~pHh~~a~E~~yVl~G~g~v~~v~~~~~~~~~l~~GDv~~~ 140 (445)
T 2cav_A 88 VLEYCSKPNTLLLPHHSDSDLLVLVLEGQAILVLVNPDGRDTYKLDQGDAIKI 140 (445)
T ss_dssp EEEEEECSSEEEEEEEESSEEEEEEEESEEEEEEEETTEEEEEEEETTEEEEE
T ss_pred EEEEEECCCcCccCcCCCCceEEEEEeCEEEEEEEeCCCCEEEEecCCCEEEE
Confidence 456788999877655455789999999998886 23346778999998843
No 264
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=35.71 E-value=3 Score=37.67 Aligned_cols=59 Identities=8% Similarity=-0.040 Sum_probs=38.0
Q ss_pred ccCcccccCcccc----cccccccccccCchhhhh-------hhc-cCCCCCCCCc----cceeehhhhhhhhc-ccc
Q psy9025 299 CGSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLH-QTPTGHNNSF----ECQVTVHREDIHES-HIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~-~~~~~~~~~~----~a~v~~a~~~lH~~-~i~ 359 (361)
..|-.++..++++ +...+.+....++.++.| ++. ... +++.. +..++.|+.|||++ ||+
T Consensus 79 ~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~i~~~i~~~l~~lh~~~~i~ 154 (360)
T 3eqc_A 79 IRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTYLREKHKIM 154 (360)
T ss_dssp HHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHHHSS--CCHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEECCCCCCHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHhCCEE
Confidence 4566677776666 334566666666676655 122 122 44442 78899999999997 886
No 265
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=35.67 E-value=38 Score=31.52 Aligned_cols=49 Identities=10% Similarity=0.101 Sum_probs=37.5
Q ss_pred cceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEE---eCcEEEEEeCCCCeec
Q psy9025 139 LRPVLYLPGDYICRKGEVGKEMYIVKTGQVQVV---SGETVLATLTEGSVFG 187 (361)
Q Consensus 139 l~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~---~~~~~~~~l~~Gd~fG 187 (361)
+....+.||..+..--...+.+++|++|...+. .+......+.+||++-
T Consensus 51 ~~~~~l~PGg~~~pHh~~a~E~~yVl~G~g~v~~v~~~~~~~~~l~~GDv~~ 102 (416)
T 1uij_A 51 IVQFQSKPNTILLPHHADADFLLFVLSGRAILTLVNNDDRDSYNLHPGDAQR 102 (416)
T ss_dssp EEEEEECTTEEEEEEEESEEEEEEEEESCEEEEEECSSCEEEEEECTTEEEE
T ss_pred EEEEEeccCcCcccccCCCceEEEEEeeEEEEEEEECCCCeEEEecCCCEEE
Confidence 557788999876655555689999999999886 2345567899999873
No 266
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=35.64 E-value=4 Score=36.63 Aligned_cols=17 Identities=18% Similarity=0.075 Sum_probs=15.9
Q ss_pred cceeehhhhhhhhcccc
Q psy9025 343 ECQVTVHREDIHESHIT 359 (361)
Q Consensus 343 ~a~v~~a~~~lH~~~i~ 359 (361)
...++.|+.|||++||+
T Consensus 114 ~~qi~~al~~lH~~~ii 130 (343)
T 3dbq_A 114 WKNMLEAVHTIHQHGIV 130 (343)
T ss_dssp HHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHhCCee
Confidence 78899999999999997
No 267
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=35.58 E-value=5 Score=35.74 Aligned_cols=17 Identities=12% Similarity=-0.058 Sum_probs=16.0
Q ss_pred cceeehhhhhhh-hcccc
Q psy9025 343 ECQVTVHREDIH-ESHIT 359 (361)
Q Consensus 343 ~a~v~~a~~~lH-~~~i~ 359 (361)
..+++.|+.||| ++||+
T Consensus 167 ~~qi~~aL~~lH~~~~iv 184 (336)
T 2vuw_A 167 LHQLTASLAVAEASLRFE 184 (336)
T ss_dssp HHHHHHHHHHHHHHHCCB
T ss_pred HHHHHHHHHHHHHhCCEe
Confidence 889999999999 99997
No 268
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=35.32 E-value=2 Score=38.23 Aligned_cols=17 Identities=18% Similarity=0.175 Sum_probs=15.9
Q ss_pred cceeehhhhhhhhcccc
Q psy9025 343 ECQVTVHREDIHESHIT 359 (361)
Q Consensus 343 ~a~v~~a~~~lH~~~i~ 359 (361)
+.+++.|+.|||++||+
T Consensus 140 ~~~l~~~l~~LH~~~iv 156 (318)
T 3lxp_A 140 AQQICEGMAYLHAQHYI 156 (318)
T ss_dssp HHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHHHHHhCCcc
Confidence 88999999999999986
No 269
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=35.27 E-value=2.9 Score=36.35 Aligned_cols=60 Identities=17% Similarity=0.141 Sum_probs=35.1
Q ss_pred cCcccccCcccc----cccccccccccCchhhhh-------hhccCCC--CCCCCc----cceeehhhhhhhhcccc
Q psy9025 300 GSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQTPT--GHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 300 ~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~~~~--~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
.|-.++..+.++ +...+.+....++.++.| ++..... .+++.. +.+++.|+.|||++||+
T Consensus 68 ~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~ 144 (295)
T 2clq_A 68 EEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIV 144 (295)
T ss_dssp HHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEE
Confidence 444555555555 333555666666666655 2221211 122321 67899999999999986
No 270
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=35.06 E-value=1.6 Score=38.49 Aligned_cols=59 Identities=8% Similarity=-0.107 Sum_probs=36.3
Q ss_pred ccCcccccCcccc----cccccccccccCchhhhh-------hh--ccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LL--HQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~--~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
..|-.++..+.++ +...+.+....|+.++.| ++ ++.+ +++.. ...++.|+.|||+.||+
T Consensus 72 ~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~--~~~~~~~~i~~~i~~~l~~lH~~~i~ 147 (314)
T 3com_A 72 IKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKT--LTEDEIATILQSTLKGLEYLHFMRKI 147 (314)
T ss_dssp HHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHHHHTCC--CCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeecCCCCCHHHHHHhcCCC--CCHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 3455555555555 333455556666666655 12 2223 55442 88899999999999986
No 271
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=34.96 E-value=1.2e+02 Score=26.97 Aligned_cols=49 Identities=14% Similarity=0.120 Sum_probs=34.4
Q ss_pred cceEEeCCCCEEEeCCCC-CCeEEEEEeeEEEEEe---C-cEEEEEeCCCCeec
Q psy9025 139 LRPVLYLPGDYICRKGEV-GKEMYIVKTGQVQVVS---G-ETVLATLTEGSVFG 187 (361)
Q Consensus 139 l~~~~~~~ge~I~~~G~~-~~~ly~I~~G~v~v~~---~-~~~~~~l~~Gd~fG 187 (361)
+....+.+|...-..-.. .+.+++|++|.+.+.- + ......+.+||++=
T Consensus 54 ~~~~~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~g~~~~~~l~~GD~~~ 107 (361)
T 2vqa_A 54 GVYMSLEPGAIRELHWHANAAEWAYVMEGRTRITLTSPEGKVEIADVDKGGLWY 107 (361)
T ss_dssp EEEEEECTTCEEEEEECTTCCEEEEEEESEEEEEEECTTSCEEEEEEETTEEEE
T ss_pred eEEEEEcCCCCCCceeCCCCCEEEEEEEeEEEEEEEeCCCcEEEEEEcCCCEEE
Confidence 345667788765433234 7899999999999873 2 23557899999763
No 272
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=34.90 E-value=77 Score=27.88 Aligned_cols=47 Identities=15% Similarity=0.023 Sum_probs=33.8
Q ss_pred ceEEeCCCCEEEeCCCC-CCeEEEEEeeEEEEEeCcEEEEEeCCCCeec
Q psy9025 140 RPVLYLPGDYICRKGEV-GKEMYIVKTGQVQVVSGETVLATLTEGSVFG 187 (361)
Q Consensus 140 ~~~~~~~ge~I~~~G~~-~~~ly~I~~G~v~v~~~~~~~~~l~~Gd~fG 187 (361)
....+.+|...-..-.. .+.+++|++|.+.+.-++.. ..+.+||++=
T Consensus 49 ~~~~~~pg~~~~~h~H~~~~e~~~Vl~G~~~~~~~~~~-~~l~~Gd~~~ 96 (337)
T 1y3t_A 49 VLLSGGKGDAFPLHVHKDTHEGILVLDGKLELTLDGER-YLLISGDYAN 96 (337)
T ss_dssp EEEEECTTCEEEEEECTTCCEEEEEEESCEEEEETTEE-EEECTTCEEE
T ss_pred EEEEeCCCCCCCceeCCCceEEEEEEECEEEEEECCEE-EEECCCCEEE
Confidence 34567888766433333 78999999999999855443 6799999873
No 273
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=34.86 E-value=40 Score=31.54 Aligned_cols=50 Identities=10% Similarity=0.093 Sum_probs=38.1
Q ss_pred hcceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEE---eCcEEEEEeCCCCeec
Q psy9025 138 KLRPVLYLPGDYICRKGEVGKEMYIVKTGQVQVV---SGETVLATLTEGSVFG 187 (361)
Q Consensus 138 ~l~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~---~~~~~~~~l~~Gd~fG 187 (361)
.+....+.||..+-.--...+.+++|++|...+. .+......+.+||++-
T Consensus 62 s~~~~~l~PGg~~~pHh~~a~Ei~yVl~G~g~v~~v~~~~~~~~~l~~GDv~~ 114 (434)
T 2ea7_A 62 RVVEFKSKPNTLLLPHHADADFLLVVLNGTAVLTLVNPDSRDSYILEQGHAQK 114 (434)
T ss_dssp EEEEEEECTTEEEEEEEESEEEEEEEEESEEEEEEECSSCEEEEEEETTEEEE
T ss_pred EEEEEEecCCcCccCccCCCceEEEEEecEEEEEEEeCCCCEEEEeCCCCEEE
Confidence 3567888999887766455689999999998876 2235667899999873
No 274
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=34.79 E-value=38 Score=28.88 Aligned_cols=33 Identities=15% Similarity=0.068 Sum_probs=26.1
Q ss_pred CCeEEEEEeeEEEEEeCcEEEEEeCCCCeechh
Q psy9025 157 GKEMYIVKTGQVQVVSGETVLATLTEGSVFGEI 189 (361)
Q Consensus 157 ~~~ly~I~~G~v~v~~~~~~~~~l~~Gd~fGe~ 189 (361)
.+.+..|++|.+.+...+.....+++||.|-..
T Consensus 186 ~~E~~~ILeG~v~lt~~~G~~~~~~aGD~~~~P 218 (238)
T 3myx_A 186 IHELMNLIEGRVVLSLENGSSLTVNTGDTVFVA 218 (238)
T ss_dssp SCEEEEEEECCEEEEETTSCEEEECTTCEEEEC
T ss_pred CCEEEEEEEeEEEEEeCCCCEEEECCCCEEEEC
Confidence 468899999999999655445789999988543
No 275
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=34.65 E-value=2.4 Score=38.73 Aligned_cols=17 Identities=24% Similarity=0.120 Sum_probs=15.8
Q ss_pred cceeehhhhhhhhcccc
Q psy9025 343 ECQVTVHREDIHESHIT 359 (361)
Q Consensus 343 ~a~v~~a~~~lH~~~i~ 359 (361)
..+++.|+.|||++||+
T Consensus 134 ~~qi~~~L~~LH~~~iv 150 (367)
T 1cm8_A 134 VYQMLKGLRYIHAAGII 150 (367)
T ss_dssp HHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHHHHHHCCcc
Confidence 78999999999999986
No 276
>2o8q_A Hypothetical protein; cpuin-like fold, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.55A {Burkholderia xenovorans}
Probab=34.58 E-value=45 Score=24.86 Aligned_cols=30 Identities=17% Similarity=0.121 Sum_probs=23.7
Q ss_pred CeEEEEEeeEEEEEeCcEEEEEeCCCCeec
Q psy9025 158 KEMYIVKTGQVQVVSGETVLATLTEGSVFG 187 (361)
Q Consensus 158 ~~ly~I~~G~v~v~~~~~~~~~l~~Gd~fG 187 (361)
..+++|++|.+.+.-++.....+.+||++=
T Consensus 65 ~E~~~vl~G~~~~~~~~~~~~~l~~Gd~~~ 94 (134)
T 2o8q_A 65 FQLFYVLRGWVEFEYEDIGAVMLEAGGSAF 94 (134)
T ss_dssp CEEEEEEESEEEEEETTTEEEEEETTCEEE
T ss_pred cEEEEEEeCEEEEEECCcEEEEecCCCEEE
Confidence 789999999999985542356799999773
No 277
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=34.53 E-value=2.5 Score=39.35 Aligned_cols=58 Identities=12% Similarity=0.076 Sum_probs=34.4
Q ss_pred ccCcccccCcccc-c---ccccccccccCchhhhh----h----hccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 299 CGSKSLNKRPHRR-V---NRSASADTYFHPKQQRR----L----LHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 299 ~~ek~i~~~~~~~-~---~~t~~d~~~~~~l~~~~----~----~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
..|-.++..++++ + ...+.++. .|+.++.| + ..+.+ +++.. ...++.|+.|||++||+
T Consensus 188 ~~E~~~l~~l~hpniv~l~~~~~~~~-~~lv~e~~~~g~L~~~l~~~~~--~~~~~~~~i~~qi~~~l~~LH~~~iv 261 (419)
T 3i6u_A 188 ETEIEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKR--LKEATCKLYFYQMLLAVQYLHENGII 261 (419)
T ss_dssp HHHHHHHHHCCCTTBCCCCEEEESSE-EEEEEECCTTCBGGGGTSSSCC--CCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHhCCCCCEeeEEEEEecCc-eEEEEEcCCCCcHHHHHhccCC--CCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 3455666666666 2 22333333 45666655 1 12112 44442 78899999999999997
No 278
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=34.31 E-value=5.5 Score=34.88 Aligned_cols=17 Identities=18% Similarity=0.155 Sum_probs=15.8
Q ss_pred cceeehhhhhhhhcccc
Q psy9025 343 ECQVTVHREDIHESHIT 359 (361)
Q Consensus 343 ~a~v~~a~~~lH~~~i~ 359 (361)
+.+++.|++|||++||+
T Consensus 126 ~~qi~~~l~~lH~~~i~ 142 (320)
T 2i6l_A 126 MYQLLRGLKYIHSANVL 142 (320)
T ss_dssp HHHHHHHHHHHHHTTCB
T ss_pred HHHHHHHHHHHHhCCEe
Confidence 78899999999999987
No 279
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=34.07 E-value=70 Score=27.72 Aligned_cols=48 Identities=17% Similarity=0.163 Sum_probs=36.7
Q ss_pred hcceEEeCCCCEEEe-CCCCCCeEEEEEeeEEEEEeCcEEEEEeCCCCee
Q psy9025 138 KLRPVLYLPGDYICR-KGEVGKEMYIVKTGQVQVVSGETVLATLTEGSVF 186 (361)
Q Consensus 138 ~l~~~~~~~ge~I~~-~G~~~~~ly~I~~G~v~v~~~~~~~~~l~~Gd~f 186 (361)
.+....+.||..|-. +-......++|++|+..+..++ ....+.+||++
T Consensus 192 ~~~~~~l~pG~~i~~~~~h~~e~~~~il~G~~~~~~~~-~~~~v~~GD~~ 240 (278)
T 1sq4_A 192 HVNIVNFEPGGVIPFAETHVMEHGLYVLEGKAVYRLNQ-DWVEVEAGDFM 240 (278)
T ss_dssp EEEEEEECSSSEESCCCCCSEEEEEEEEECEEEEEETT-EEEEEETTCEE
T ss_pred EEEEEEECCCCCcCCCCCCCccEEEEEEeCEEEEEECC-EEEEeCCCCEE
Confidence 366788999999874 3434457899999999988654 34778999986
No 280
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=33.81 E-value=52 Score=28.37 Aligned_cols=68 Identities=12% Similarity=0.105 Sum_probs=40.4
Q ss_pred eEEeCCCCEEEeC-C-CCCCeEEEEEeeEEEEEeCcEEEEEeCCCCeechhhhhcccCCCceeeEEEecceEEEEEE
Q psy9025 141 PVLYLPGDYICRK-G-EVGKEMYIVKTGQVQVVSGETVLATLTEGSVFGEISLLALAGTNRRTADVRSHGFSNLFVL 215 (361)
Q Consensus 141 ~~~~~~ge~I~~~-G-~~~~~ly~I~~G~v~v~~~~~~~~~l~~Gd~fGe~~ll~~~~~~~~~~~v~A~~~~~~~~l 215 (361)
...+.||...-.. . ...+.+++|++|.+.+.-++. ...|.+||++-..+ +.+........+++.++.+
T Consensus 66 ~~~l~pg~~~~~~~~~~~~ee~~~Vl~G~l~~~~~~~-~~~L~~GD~~~~~~------~~~H~~~N~~~~~~~~l~v 135 (274)
T 1sef_A 66 IATFHKNGQQTTGFGGDGIQTLVYVIDGRLRVSDGQE-THELEAGGYAYFTP------EMKMYLANAQEADTEVFLY 135 (274)
T ss_dssp EEEEEEEEEECSCSSBTTEEEEEEEEESEEEEECSSC-EEEEETTEEEEECT------TSCCEEEESSSSCEEEEEE
T ss_pred EEEECCCCcCCCCCCCCCceEEEEEEEeEEEEEECCE-EEEECCCCEEEECC------CCCEEEEeCCCCCEEEEEE
Confidence 4556777654322 1 124679999999999984433 35799999875433 3333333333345666655
No 281
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=33.42 E-value=3.5 Score=36.30 Aligned_cols=44 Identities=11% Similarity=0.043 Sum_probs=28.6
Q ss_pred cccccccccCchhhhh--------hhccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 314 RSASADTYFHPKQQRR--------LLHQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 314 ~t~~d~~~~~~l~~~~--------~~~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
..+.+...+|+.++.| +....+ +++.. +.+++.|+.|||++||+
T Consensus 78 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~i~~qi~~~l~~lH~~~iv 133 (316)
T 2ac3_A 78 EFFEEEDRFYLVFEKMRGGSILSHIHKRRH--FNELEASVVVQDVASALDFLHNKGIA 133 (316)
T ss_dssp EEEEETTEEEEEEECCTTCBHHHHHHHHSS--CCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred EEEeeCCEEEEEEEcCCCCcHHHHHhccCC--CCHHHHHHHHHHHHHHHHHHHhCCce
Confidence 3455556666666655 122122 44442 78899999999999997
No 282
>3ldc_A Calcium-gated potassium channel MTHK; transmembrane, ION channel, open conformation, IO transport; 1.45A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3lde_A 4hyo_A 4hz3_D 3r65_A 3ous_A 3ldd_A
Probab=32.46 E-value=2.3 Score=29.76 Aligned_cols=31 Identities=6% Similarity=-0.218 Sum_probs=24.7
Q ss_pred eecCCCCccccc---ceeecceeeeehhhHHHHH
Q psy9025 3 IYPRNNETEANT---WLRKESVPEQVRGDIESGV 33 (361)
Q Consensus 3 ~~~~~~~~~~~~---~l~g~~vfayiiG~i~s~~ 33 (361)
++|.+...+..+ ++.|.+++++.+|.+++.+
T Consensus 48 i~P~t~~~r~~~~~~~~~G~~~~~~~~~~i~~~l 81 (82)
T 3ldc_A 48 YSPHTPLGMYFTCTLIVLGIGTFAVAVERLLEFL 81 (82)
T ss_dssp SCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 467777777553 7799999999999998875
No 283
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=32.28 E-value=4 Score=36.97 Aligned_cols=17 Identities=24% Similarity=0.171 Sum_probs=16.0
Q ss_pred cceeehhhhhhhhcccc
Q psy9025 343 ECQVTVHREDIHESHIT 359 (361)
Q Consensus 343 ~a~v~~a~~~lH~~~i~ 359 (361)
+..++.|+.|||++||+
T Consensus 158 ~~qi~~~l~~lH~~~ii 174 (364)
T 3op5_A 158 SLRILDILEYIHEHEYV 174 (364)
T ss_dssp HHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHHHHHHCCeE
Confidence 88999999999999987
No 284
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=31.85 E-value=3.2 Score=36.41 Aligned_cols=17 Identities=18% Similarity=0.085 Sum_probs=15.6
Q ss_pred cceeehhhhhhhhcccc
Q psy9025 343 ECQVTVHREDIHESHIT 359 (361)
Q Consensus 343 ~a~v~~a~~~lH~~~i~ 359 (361)
+..++.|+.|||++||+
T Consensus 139 ~~~i~~~l~~lH~~~i~ 155 (307)
T 2nru_A 139 AQGAANGINFLHENHHI 155 (307)
T ss_dssp HHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHHHHhcCCee
Confidence 77899999999999986
No 285
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=31.80 E-value=2.2 Score=37.80 Aligned_cols=60 Identities=13% Similarity=0.129 Sum_probs=36.6
Q ss_pred cCcccccCcccc----cccccccccccCchhhhh-------hhccCCC--CCCCCc----cceeehhhhhhhhcc--cc
Q psy9025 300 GSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQTPT--GHNNSF----ECQVTVHREDIHESH--IT 359 (361)
Q Consensus 300 ~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~~~~--~~~~~~----~a~v~~a~~~lH~~~--i~ 359 (361)
.|-.++..++++ +...+.+...+++.++.| ++..... .+++.. +.+++.|+.|||++| |+
T Consensus 83 ~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~iv 161 (309)
T 3p86_A 83 REVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIV 161 (309)
T ss_dssp HHHHHHHHCCCTTBCCEEEEECSTTCCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCC
T ss_pred HHHHHHHhCCCCCEeeEEEEEEECCceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEE
Confidence 455555555555 334566666677777655 2331110 033332 779999999999999 86
No 286
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=31.68 E-value=1.8 Score=37.79 Aligned_cols=44 Identities=11% Similarity=0.067 Sum_probs=28.3
Q ss_pred cccccccccCchhhhh-------hh-ccCCCCCCCCc----cceeehhhhhhhhcccc
Q psy9025 314 RSASADTYFHPKQQRR-------LL-HQTPTGHNNSF----ECQVTVHREDIHESHIT 359 (361)
Q Consensus 314 ~t~~d~~~~~~l~~~~-------~~-~~~~~~~~~~~----~a~v~~a~~~lH~~~i~ 359 (361)
..+.+..+.++.++.| ++ .+.+ +++.. ..+++.|+.|||++||+
T Consensus 91 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~qi~~~l~~lH~~~i~ 146 (298)
T 1phk_A 91 DTYETNTFFFLVFDLMKKGELFDYLTEKVT--LSEKETRKIMRALLEVICALHKLNIV 146 (298)
T ss_dssp EEEECSSEEEEEEECCTTCBHHHHHHHHSS--CCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred eeeccCCeEEEEEeccCCCcHHHHHhccCC--CCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 3555556666666554 12 2122 44442 88999999999999986
No 287
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=31.26 E-value=73 Score=28.88 Aligned_cols=49 Identities=14% Similarity=0.099 Sum_probs=34.3
Q ss_pred cceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEEe---Cc-EEEEEeCCCCeec
Q psy9025 139 LRPVLYLPGDYICRKGEVGKEMYIVKTGQVQVVS---GE-TVLATLTEGSVFG 187 (361)
Q Consensus 139 l~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~---~~-~~~~~l~~Gd~fG 187 (361)
+....+.+|..+-.--.....+++|++|.+.+.- ++ .....+.+||++=
T Consensus 81 ~~~~~l~pg~~~~~H~H~~~E~~~Vl~G~~~~~~~~~~g~~~~~~l~~GD~~~ 133 (385)
T 1j58_A 81 SVNMRLKPGAIRELHWHKEAEWAYMIYGSARVTIVDEKGRSFIDDVGEGDLWY 133 (385)
T ss_dssp EEEEEECTTCEEEEEEESSCEEEEEEEEEEEEEEECTTSCEEEEEEETTEEEE
T ss_pred EEEEEECCCCCCCCccCChheEEEEEeeeEEEEEEeCCCcEEEEEeCCCCEEE
Confidence 4456678888654333347899999999999873 22 3345899999873
No 288
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=30.92 E-value=86 Score=29.83 Aligned_cols=57 Identities=18% Similarity=0.197 Sum_probs=38.6
Q ss_pred HHHHHHhcceEEeCCCCEEEeCCC-CCCeEEEEEeeEEEEE--eC--cEE-EEEeCCCCeech
Q psy9025 132 LRELVLKLRPVLYLPGDYICRKGE-VGKEMYIVKTGQVQVV--SG--ETV-LATLTEGSVFGE 188 (361)
Q Consensus 132 l~~l~~~l~~~~~~~ge~I~~~G~-~~~~ly~I~~G~v~v~--~~--~~~-~~~l~~Gd~fGe 188 (361)
+..+--.+....+.||..+-.--. .++.+++|++|.+.+. +. ..+ ...+.+||+|=.
T Consensus 362 L~~lgls~a~v~l~pG~~~~pH~Hp~a~Ei~yVl~G~~~v~v~~~~g~~~~~~~l~~GDv~vv 424 (493)
T 2d5f_A 362 LRQFGLSAQYVVLYRNGIYSPHWNLNANSVIYVTRGKGRVRVVNAQGNAVFDGELRRGQLLVV 424 (493)
T ss_dssp HHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEEE
T ss_pred ccccceEEEEEEccCCceeeeeECCCCCEEEEEEeceEEEEEEcCCCCEEEeEEEcCCCEEEE
Confidence 344445577778889886554322 3579999999999886 21 233 367999998843
No 289
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=30.88 E-value=4.6 Score=35.31 Aligned_cols=17 Identities=12% Similarity=0.085 Sum_probs=15.9
Q ss_pred cceeehhhhhhhhcccc
Q psy9025 343 ECQVTVHREDIHESHIT 359 (361)
Q Consensus 343 ~a~v~~a~~~lH~~~i~ 359 (361)
+.+++.|+.|||++||+
T Consensus 123 ~~qi~~~l~~lH~~~i~ 139 (299)
T 3m2w_A 123 MKSIGEAIQYLHSINIA 139 (299)
T ss_dssp HHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHHHHHhCCcc
Confidence 88999999999999986
No 290
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=30.33 E-value=4.8 Score=35.80 Aligned_cols=17 Identities=18% Similarity=0.096 Sum_probs=15.9
Q ss_pred cceeehhhhhhhhcccc
Q psy9025 343 ECQVTVHREDIHESHIT 359 (361)
Q Consensus 343 ~a~v~~a~~~lH~~~i~ 359 (361)
...++.|++|||++||+
T Consensus 137 ~~ql~~~L~~LH~~giv 153 (327)
T 3lm5_A 137 IKQILEGVYYLHQNNIV 153 (327)
T ss_dssp HHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHHHHHHCCee
Confidence 78999999999999986
No 291
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=30.15 E-value=82 Score=29.81 Aligned_cols=50 Identities=10% Similarity=0.046 Sum_probs=35.0
Q ss_pred hcceEEeCCCCEEEeCCCC-CCeEEEEEeeEEEEE--eC---cEEEEEeCCCCeec
Q psy9025 138 KLRPVLYLPGDYICRKGEV-GKEMYIVKTGQVQVV--SG---ETVLATLTEGSVFG 187 (361)
Q Consensus 138 ~l~~~~~~~ge~I~~~G~~-~~~ly~I~~G~v~v~--~~---~~~~~~l~~Gd~fG 187 (361)
.+....+.||..+-.--.+ ++.+++|++|.+.+. +. ......+.+||+|=
T Consensus 339 s~~~v~l~pGa~~~pH~Hp~a~Ei~yVl~G~~~v~v~~~~G~~~~~~~l~~GDv~v 394 (476)
T 1fxz_A 339 SAEFGSLRKNAMFVPHYNLNANSIIYALNGRALIQVVNCNGERVFDGELQEGRVLI 394 (476)
T ss_dssp CEEEEEECTTCEEEEEEETTCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEE
T ss_pred eEEEEEecCCceecceECCCCCEEEEEEeCEEEEEEEecCCCEEeeeEEcCCCEEE
Confidence 4567778888865433233 579999999999886 21 23445799999883
No 292
>3lag_A Uncharacterized protein RPA4178; functionally unknown protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris}
Probab=30.02 E-value=14 Score=26.48 Aligned_cols=48 Identities=17% Similarity=0.217 Sum_probs=32.2
Q ss_pred cceEEeCCCCEEEeCCCCC-CeEEEEEeeEEEEEeCc--EEEEEeCCCCee
Q psy9025 139 LRPVLYLPGDYICRKGEVG-KEMYIVKTGQVQVVSGE--TVLATLTEGSVF 186 (361)
Q Consensus 139 l~~~~~~~ge~I~~~G~~~-~~ly~I~~G~v~v~~~~--~~~~~l~~Gd~f 186 (361)
.....++||..+-..--+. ...|+|.+|.+.+..++ .....+.+|+.+
T Consensus 19 V~r~~i~PG~~~~~H~H~~~~e~~~v~~G~~~v~~~d~~~~~~~l~~G~~~ 69 (98)
T 3lag_A 19 VTEWRLPPGSATGHHTHGMDYVVVPMADGEMTIVAPDGTRSLAQLKTGRSY 69 (98)
T ss_dssp EEEEEECTTEECCSEECCSCEEEEESSCBC-CEECTTSCEECCCBCTTCCE
T ss_pred EEEEEECCCCccCcEECCCcEEEEEEeccEEEEEeCCCceEEEEecCCcEE
Confidence 3456788998876655554 45788889999998433 344567888765
No 293
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=28.94 E-value=97 Score=26.77 Aligned_cols=49 Identities=14% Similarity=0.306 Sum_probs=37.5
Q ss_pred hcceEEeCCCCEEE-eCCCCCCeEEEEEeeEEEEEeCcEEEEEeCCCCeec
Q psy9025 138 KLRPVLYLPGDYIC-RKGEVGKEMYIVKTGQVQVVSGETVLATLTEGSVFG 187 (361)
Q Consensus 138 ~l~~~~~~~ge~I~-~~G~~~~~ly~I~~G~v~v~~~~~~~~~l~~Gd~fG 187 (361)
.+....|.||..|= .+-....+-++|++|+..+.-++. ...+++||++=
T Consensus 187 ~~~~~t~~PG~~~p~~e~H~~eh~~~vL~G~g~y~l~~~-~~~V~~GD~i~ 236 (266)
T 4e2q_A 187 NIHTMDFQPGEFLNVKEVHYNQHGLLLLEGQGIYRLGDN-WYPVQAGDVIW 236 (266)
T ss_dssp EEEEEEECTTCBCSSCCCCSCCEEEEEEECEEEEEETTE-EEEEETTCEEE
T ss_pred EEEEEEECCCcCcCCceEcccceEEEEEeceEEEEECCE-EEEecCCCEEE
Confidence 35677799999985 355566789999999998885543 56788999863
No 294
>3or8_A Transcription elongation factor SPT6; SH2, CTD binding; HET: MES; 1.60A {Candida glabrata} PDB: 3pjp_A* 3psj_A* 3psk_A 2l3t_A 3gxw_A 3gxx_A
Probab=28.89 E-value=86 Score=25.76 Aligned_cols=38 Identities=13% Similarity=0.266 Sum_probs=30.9
Q ss_pred cCcccccCCHHHHHHHHHhcceEEeCCCCEEEeCCCCC-CeEEE
Q psy9025 120 KVQLFQDCDEALLRELVLKLRPVLYLPGDYICRKGEVG-KEMYI 162 (361)
Q Consensus 120 ~~~~f~~l~~~~l~~l~~~l~~~~~~~ge~I~~~G~~~-~~ly~ 162 (361)
..|.|.+++-.+.++.+.. -..||+|++....+ +.+-+
T Consensus 7 ~HP~F~n~~~~qAe~~L~~-----~~~Ge~iIRPSSkg~dhLtv 45 (197)
T 3or8_A 7 NHPYYFPFNGKQAEDYLRS-----KERGDFVIRQSSRGDDHLAI 45 (197)
T ss_dssp CCTTEECCCHHHHHHHHTT-----SCTTCEEEEECSSCTTEEEE
T ss_pred CCCCcCCCCHHHHHHHHhc-----CCCCCEEEeeCCCCCCcEEE
Confidence 6899999999998888765 37899999998876 55544
No 295
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=28.79 E-value=81 Score=30.13 Aligned_cols=56 Identities=18% Similarity=0.118 Sum_probs=38.1
Q ss_pred HHHHHHhcceEEeCCCCEEEeCCCC-CCeEEEEEeeEEEEE--e---CcEEEEEeCCCCeec
Q psy9025 132 LRELVLKLRPVLYLPGDYICRKGEV-GKEMYIVKTGQVQVV--S---GETVLATLTEGSVFG 187 (361)
Q Consensus 132 l~~l~~~l~~~~~~~ge~I~~~G~~-~~~ly~I~~G~v~v~--~---~~~~~~~l~~Gd~fG 187 (361)
+..+--.+....+.||..+-.--.+ ++.+++|++|.+.+. + .......+.+||+|=
T Consensus 367 L~~l~is~a~v~L~PG~~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~G~~~~~~~l~~GDv~v 428 (510)
T 3c3v_A 367 LRWLGLSAEYGNLYRNALFVPHYNTNAHSIIYALRGRAHVQVVDSNGNRVYDEELQEGHVLV 428 (510)
T ss_dssp HHHHTCEEEEEEEETTCEEEEEEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEE
T ss_pred cccceEEEEEEEecCCceecceECCCCCEEEEEEeCEEEEEEEeCCCCEEEeEEEcCCcEEE
Confidence 3444445677788898865433223 589999999999886 2 223345799999883
No 296
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=28.14 E-value=4.2 Score=36.31 Aligned_cols=17 Identities=24% Similarity=0.087 Sum_probs=15.5
Q ss_pred cceeehhhhhhhh-cccc
Q psy9025 343 ECQVTVHREDIHE-SHIT 359 (361)
Q Consensus 343 ~a~v~~a~~~lH~-~~i~ 359 (361)
+.+++.|+.|||+ +||+
T Consensus 157 ~~qi~~~l~~lH~~~~i~ 174 (348)
T 2pml_X 157 IKSVLNSFSYIHNEKNIC 174 (348)
T ss_dssp HHHHHHHHHHHHHTSCEE
T ss_pred HHHHHHHHHHHhccCCEe
Confidence 7889999999999 9986
No 297
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=28.00 E-value=62 Score=30.07 Aligned_cols=49 Identities=16% Similarity=0.274 Sum_probs=37.3
Q ss_pred cceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEE---eCcEEEEEeCCCCeec
Q psy9025 139 LRPVLYLPGDYICRKGEVGKEMYIVKTGQVQVV---SGETVLATLTEGSVFG 187 (361)
Q Consensus 139 l~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~---~~~~~~~~l~~Gd~fG 187 (361)
+....+.||..+...--.++.+++|++|...+. .+......+.+||+|-
T Consensus 46 l~~~~l~p~gl~~Phh~~A~ei~yV~~G~g~~g~V~~~~~~~~~l~~GDv~~ 97 (418)
T 3s7i_A 46 IVQIEAKPNTLVLPKHADADNILVIQQGQATVTVANGNNRKSFNLDEGHALR 97 (418)
T ss_dssp EEEEEECTTEEEEEEEESEEEEEEEEESEEEEEEECSSCEEEEEEETTEEEE
T ss_pred EEEEEecCCceeeeeeCCCCeEEEEEEeeEEEEEEecCCEEEEEecCCCEEE
Confidence 345567888888776556789999999998775 2346678899999983
No 298
>2q67_A Potassium channel protein; inverted teepee, helix bundle, tetramer, central cavity, ION metal transport, membrane protein; 2.30A {Bacillus cereus} PDB: 2q68_A 2q6a_A 2q69_A 2ahy_A 2ahz_A
Probab=27.99 E-value=3.2 Score=31.15 Aligned_cols=35 Identities=6% Similarity=-0.085 Sum_probs=26.4
Q ss_pred eecCCCCcccc---cceeecceeeeehhhHHHHHhhhh
Q psy9025 3 IYPRNNETEAN---TWLRKESVPEQVRGDIESGVDEDE 37 (361)
Q Consensus 3 ~~~~~~~~~~~---~~l~g~~vfayiiG~i~s~~~~~~ 37 (361)
++|.+...+.. .+++|.+++++.+|.+++.+...+
T Consensus 69 i~P~t~~gr~~~~~~~~~G~~~~~~~~~~l~~~~~~~~ 106 (114)
T 2q67_A 69 FSPQTDFGKIFTILYIFIGIGLVFGFIHKLAVNVQLPS 106 (114)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--
T ss_pred CccCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46777766655 477999999999999999885544
No 299
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=27.78 E-value=2.1e+02 Score=25.93 Aligned_cols=75 Identities=21% Similarity=0.256 Sum_probs=50.4
Q ss_pred EEeCCCCEEEeCCCCCCeEEEEEeeEEEEEeCcEEEEEeCCCCeechhhhhcccCCCceeeEEEecceEEEEEEeHHHHH
Q psy9025 142 VLYLPGDYICRKGEVGKEMYIVKTGQVQVVSGETVLATLTEGSVFGEISLLALAGTNRRTADVRSHGFSNLFVLNKDDLN 221 (361)
Q Consensus 142 ~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~~~~~~~~l~~Gd~fGe~~ll~~~~~~~~~~~v~A~~~~~~~~l~~~~f~ 221 (361)
..+.+|+..-.--..+..+|.|.+|.-.+.-++. ....++||.|--.+. ...+..+.+++.++.++-.-+.
T Consensus 284 ~~L~pG~~t~~hRht~s~Vy~V~eG~G~~~I~~~-~~~w~~gD~fvvP~w--------~~h~~~n~~~a~Lf~~~D~Pl~ 354 (368)
T 3nw4_A 284 HRLRAGTETATRNEVGSTVFQVFEGAGAVVMNGE-TTKLEKGDMFVVPSW--------VPWSLQAETQFDLFRFSDAPIM 354 (368)
T ss_dssp EEECTTCBCCCEEESSCEEEEEEESCEEEEETTE-EEEECTTCEEEECTT--------CCEEEEESSSEEEEEEESHHHH
T ss_pred EEECCCCccCCeeccccEEEEEEeCcEEEEECCE-EEEecCCCEEEECCC--------CcEEEEeCCCEEEEEEeCHHHH
Confidence 3345555443333456789999999988875553 356899999855442 2344566789999999877776
Q ss_pred HHHH
Q psy9025 222 EAIE 225 (361)
Q Consensus 222 ~ll~ 225 (361)
+.++
T Consensus 355 ~~LG 358 (368)
T 3nw4_A 355 EALS 358 (368)
T ss_dssp HHTT
T ss_pred HHhC
Confidence 6554
No 300
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=27.49 E-value=6.9 Score=33.74 Aligned_cols=17 Identities=12% Similarity=0.276 Sum_probs=15.8
Q ss_pred cceeehhhhhhhhc-ccc
Q psy9025 343 ECQVTVHREDIHES-HIT 359 (361)
Q Consensus 343 ~a~v~~a~~~lH~~-~i~ 359 (361)
..+++.|+.|||++ ||+
T Consensus 115 ~~qi~~~l~~lH~~~~i~ 132 (290)
T 3fme_A 115 AVSIVKALEHLHSKLSVI 132 (290)
T ss_dssp HHHHHHHHHHHHHHSCCC
T ss_pred HHHHHHHHHHHhhcCCee
Confidence 88999999999998 986
No 301
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=27.39 E-value=2.2e+02 Score=25.46 Aligned_cols=75 Identities=19% Similarity=0.174 Sum_probs=46.7
Q ss_pred eEEeCCCCEEEeCCCCCCeEEEEEeeEEEEEeCcEEEEEeCCCCeechhhhhcccCCCceeeEEEecceEEEEEEeHHHH
Q psy9025 141 PVLYLPGDYICRKGEVGKEMYIVKTGQVQVVSGETVLATLTEGSVFGEISLLALAGTNRRTADVRSHGFSNLFVLNKDDL 220 (361)
Q Consensus 141 ~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~~~~~~~~l~~Gd~fGe~~ll~~~~~~~~~~~v~A~~~~~~~~l~~~~f 220 (361)
...+++|...-.--.....+|+|.+|...+.-++ ....+.+||+|=-.+.. . ..+.+.+++.++.+.-..+
T Consensus 272 ~~~l~pG~~~~~H~h~~~ev~~v~~G~g~~~v~~-~~~~~~~GD~~~vP~~~------~--H~~~n~e~~~l~~~~d~p~ 342 (354)
T 2d40_A 272 LQLLPKGFASRVARTTDSTIYHVVEGSGQVIIGN-ETFSFSAKDIFVVPTWH------G--VSFQTTQDSVLFSFSDRPV 342 (354)
T ss_dssp EEEECTTCBCCCBEESSCEEEEEEEEEEEEEETT-EEEEEETTCEEEECTTC------C--EEEEEEEEEEEEEEESHHH
T ss_pred EEEECCCCCCCceecCCcEEEEEEeCeEEEEECC-EEEEEcCCCEEEECCCC------e--EEEEeCCCEEEEEEcCHHH
Confidence 4455666544332334568999999998887544 44678999998554422 2 2233347788888865555
Q ss_pred HHHH
Q psy9025 221 NEAI 224 (361)
Q Consensus 221 ~~ll 224 (361)
..-+
T Consensus 343 ~~~l 346 (354)
T 2d40_A 343 QEAL 346 (354)
T ss_dssp HHHT
T ss_pred HHHh
Confidence 4443
No 302
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=26.64 E-value=9.7 Score=38.02 Aligned_cols=61 Identities=15% Similarity=0.135 Sum_probs=37.5
Q ss_pred ccCcccccCcccc-cc---c------ccccccccCchhhhh-------hhccCC--CCCCCCc----cceeehhhhhhhh
Q psy9025 299 CGSKSLNKRPHRR-VN---R------SASADTYFHPKQQRR-------LLHQTP--TGHNNSF----ECQVTVHREDIHE 355 (361)
Q Consensus 299 ~~ek~i~~~~~~~-~~---~------t~~d~~~~~~l~~~~-------~~~~~~--~~~~~~~----~a~v~~a~~~lH~ 355 (361)
..|-.++..++++ +. . .+.+....++.++.| ++.... .++++.. +.+++.|+.|||+
T Consensus 60 ~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs 139 (676)
T 3qa8_A 60 CLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHE 139 (676)
T ss_dssp HHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCCceeeeecccccccCCCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 3455666666665 21 1 223356667777766 233111 1355553 8899999999999
Q ss_pred cccc
Q psy9025 356 SHIT 359 (361)
Q Consensus 356 ~~i~ 359 (361)
+||+
T Consensus 140 ~gIV 143 (676)
T 3qa8_A 140 NRII 143 (676)
T ss_dssp TTBC
T ss_pred CCCc
Confidence 9987
No 303
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=26.29 E-value=7.5 Score=34.71 Aligned_cols=17 Identities=18% Similarity=0.112 Sum_probs=15.8
Q ss_pred cceeehhhhhhhhcccc
Q psy9025 343 ECQVTVHREDIHESHIT 359 (361)
Q Consensus 343 ~a~v~~a~~~lH~~~i~ 359 (361)
+.+++.|+.|||++||+
T Consensus 118 ~~qi~~~L~~LH~~~iv 134 (353)
T 2b9h_A 118 IYQTLRAVKVLHGSNVI 134 (353)
T ss_dssp HHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHHHHHHCCee
Confidence 78999999999999986
No 304
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=26.24 E-value=1.2e+02 Score=29.09 Aligned_cols=58 Identities=16% Similarity=0.139 Sum_probs=41.0
Q ss_pred HHHHHHhcceEEeCCCCEEEeCC-CCCCeEEEEEeeEEEEE--e---CcEEEEEeCCCCeechh
Q psy9025 132 LRELVLKLRPVLYLPGDYICRKG-EVGKEMYIVKTGQVQVV--S---GETVLATLTEGSVFGEI 189 (361)
Q Consensus 132 l~~l~~~l~~~~~~~ge~I~~~G-~~~~~ly~I~~G~v~v~--~---~~~~~~~l~~Gd~fGe~ 189 (361)
+..|--.+....+.||-++-.-= -.++.+.+|++|.+.+. + .......+.+||+|=..
T Consensus 389 L~~LgiS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~G~~v~~~~L~~GDV~v~P 452 (531)
T 3fz3_A 389 LRFLRLSAERGFFYRNGIYSPHWNVNAHSVVYVIRGNARVQVVNENGDAILDQEVQQGQLFIVP 452 (531)
T ss_dssp HHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEEEC
T ss_pred cccCceeEEEEEeecCccccceEcCCCCEEEEEEeCcEEEEEEeCCCcEEEEEEecCCeEEEEC
Confidence 44444457788899998775422 23689999999999976 2 23456789999998443
No 305
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=26.24 E-value=6.1 Score=36.88 Aligned_cols=17 Identities=12% Similarity=0.257 Sum_probs=15.9
Q ss_pred cceeehhhhhhhhcccc
Q psy9025 343 ECQVTVHREDIHESHIT 359 (361)
Q Consensus 343 ~a~v~~a~~~lH~~~i~ 359 (361)
+.+++.|+.|||++||+
T Consensus 206 ~~qi~~aL~~LH~~~iv 222 (429)
T 3kvw_A 206 AHSILQCLDALHKNRII 222 (429)
T ss_dssp HHHHHHHHHHHHHHTEE
T ss_pred HHHHHHHHHHHHHCCee
Confidence 88999999999999986
No 306
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=25.92 E-value=7.3 Score=35.32 Aligned_cols=17 Identities=24% Similarity=0.145 Sum_probs=15.7
Q ss_pred cceeehhhhhhhhc-ccc
Q psy9025 343 ECQVTVHREDIHES-HIT 359 (361)
Q Consensus 343 ~a~v~~a~~~lH~~-~i~ 359 (361)
..+++.|+.|||++ ||+
T Consensus 152 ~~qi~~aL~~lH~~~giv 169 (397)
T 1wak_A 152 IQQVLQGLDYLHTKCRII 169 (397)
T ss_dssp HHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHHhCCEe
Confidence 88999999999998 886
No 307
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=25.49 E-value=2.9 Score=38.09 Aligned_cols=17 Identities=12% Similarity=0.049 Sum_probs=15.8
Q ss_pred cceeehhhhhhhhcccc
Q psy9025 343 ECQVTVHREDIHESHIT 359 (361)
Q Consensus 343 ~a~v~~a~~~lH~~~i~ 359 (361)
...++.|+.|||+.||+
T Consensus 206 ~~qi~~~L~~LH~~gi~ 222 (365)
T 2y7j_A 206 MRSLLEAVSFLHANNIV 222 (365)
T ss_dssp HHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHHHHHhCCee
Confidence 78899999999999986
No 308
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=25.48 E-value=5.5 Score=39.69 Aligned_cols=17 Identities=6% Similarity=0.010 Sum_probs=16.0
Q ss_pred cceeehhhhhhhhcccc
Q psy9025 343 ECQVTVHREDIHESHIT 359 (361)
Q Consensus 343 ~a~v~~a~~~lH~~~i~ 359 (361)
...++.|++|||++||+
T Consensus 188 ~~qi~~aL~~lH~~gii 204 (681)
T 2pzi_A 188 LLEILPALSYLHSIGLV 204 (681)
T ss_dssp HHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHHHHHHCCCe
Confidence 78999999999999987
No 309
>3cjx_A Protein of unknown function with A cupin-like FOL; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.60A {Ralstonia eutropha}
Probab=25.44 E-value=69 Score=25.42 Aligned_cols=48 Identities=15% Similarity=0.022 Sum_probs=32.9
Q ss_pred cceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEEeCcEEEEEeCCCCeech
Q psy9025 139 LRPVLYLPGDYICRKGEVGKEMYIVKTGQVQVVSGETVLATLTEGSVFGE 188 (361)
Q Consensus 139 l~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~~~~~~~~l~~Gd~fGe 188 (361)
+....|.+|..+-.-.-++....+|++|.+...+.. ...+.+||++=+
T Consensus 45 v~lvr~~pG~~~p~H~H~g~ee~~VL~G~f~~~~~~--~~~~~aGd~~~~ 92 (165)
T 3cjx_A 45 VMRASFAPGLTLPLHFHTGTVHMYTISGCWYYTEYP--GQKQTAGCYLYE 92 (165)
T ss_dssp EEEEEECTTCBCCEEEESSCEEEEEEESEEEETTCT--TSCEETTEEEEE
T ss_pred EEEEEECCCCcCCcccCCCCEEEEEEEEEEEECCCc--eEEECCCeEEEe
Confidence 557788999888776667888999999998863210 123456666533
No 310
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=25.06 E-value=1.3e+02 Score=25.39 Aligned_cols=47 Identities=13% Similarity=0.125 Sum_probs=33.3
Q ss_pred cceEEeCCCCEEEeCC-CCCCeEEEEEeeEEEEEeCcEEEEEeCCCCee
Q psy9025 139 LRPVLYLPGDYICRKG-EVGKEMYIVKTGQVQVVSGETVLATLTEGSVF 186 (361)
Q Consensus 139 l~~~~~~~ge~I~~~G-~~~~~ly~I~~G~v~v~~~~~~~~~l~~Gd~f 186 (361)
+....+.||..+-..- .....+++|++|.+.+.-++. ...+.+||++
T Consensus 181 ~~~~~~~pG~~~~~h~H~~~~E~~~Vl~G~~~~~i~~~-~~~l~~GD~i 228 (261)
T 1rc6_A 181 MHILSFAPGASHGYIETHVQEHGAYILSGQGVYNLDNN-WIPVKKGDYI 228 (261)
T ss_dssp EEEEEECTTCCBEEEEEESSCEEEEEEESEEEEESSSC-EEEEETTCEE
T ss_pred EEEEEECCCCccCcccCCCceEEEEEEEeEEEEEECCE-EEEeCCCCEE
Confidence 4567788888654322 235789999999999984432 3578999977
No 311
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=24.97 E-value=13 Score=32.73 Aligned_cols=61 Identities=10% Similarity=-0.062 Sum_probs=36.8
Q ss_pred ccCcccccCcccc----cccccccccccCchhhhh-------hhccCCC---CCCCCc----cceeehhhhhhhhc---c
Q psy9025 299 CGSKSLNKRPHRR----VNRSASADTYFHPKQQRR-------LLHQTPT---GHNNSF----ECQVTVHREDIHES---H 357 (361)
Q Consensus 299 ~~ek~i~~~~~~~----~~~t~~d~~~~~~l~~~~-------~~~~~~~---~~~~~~----~a~v~~a~~~lH~~---~ 357 (361)
..|-.++..+.++ +...+.+....++.++.| ++..... .+++.. +.+++.|+.|||++ |
T Consensus 75 ~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ 154 (326)
T 3uim_A 75 QTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPK 154 (326)
T ss_dssp HHHHHGGGTCCCTTBCCCCEEECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSC
T ss_pred HHHHHHHHhccCCCccceEEEEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 4455666666666 334556666666666655 2321111 133332 78899999999999 8
Q ss_pred cc
Q psy9025 358 IT 359 (361)
Q Consensus 358 i~ 359 (361)
|+
T Consensus 155 iv 156 (326)
T 3uim_A 155 II 156 (326)
T ss_dssp EE
T ss_pred eE
Confidence 86
No 312
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=24.24 E-value=16 Score=33.25 Aligned_cols=17 Identities=18% Similarity=0.028 Sum_probs=15.8
Q ss_pred cceeehhhhhhhhcccc
Q psy9025 343 ECQVTVHREDIHESHIT 359 (361)
Q Consensus 343 ~a~v~~a~~~lH~~~i~ 359 (361)
+..++.|++|||++|||
T Consensus 191 ~~qia~gl~yLH~~~ii 207 (353)
T 4ase_A 191 SFQVAKGMEFLASRKCI 207 (353)
T ss_dssp HHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHhHhhCCee
Confidence 77899999999999997
No 313
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=24.01 E-value=73 Score=27.05 Aligned_cols=53 Identities=19% Similarity=0.092 Sum_probs=34.8
Q ss_pred CCCCeEEEEEeeEEEEEeCcEEEEEeCCCCeechhhhhcccCCCceeeEEEecceEEEEEEe
Q psy9025 155 EVGKEMYIVKTGQVQVVSGETVLATLTEGSVFGEISLLALAGTNRRTADVRSHGFSNLFVLN 216 (361)
Q Consensus 155 ~~~~~ly~I~~G~v~v~~~~~~~~~l~~Gd~fGe~~ll~~~~~~~~~~~v~A~~~~~~~~l~ 216 (361)
-+.+++.+|++|.+.+..+. ....+++||.|-.. .-...+..+.+++..+..-
T Consensus 63 ~p~dE~~~VleG~~~lt~~g-~~~~~~~Gd~~~ip--------~G~~~~w~~~~~~~~~y~~ 115 (238)
T 3myx_A 63 YPYTEMLVMHRGSVTLTSGT-DSVTLSTGESAVIG--------RGTQVRIDAQPESLWAFCA 115 (238)
T ss_dssp CSSEEEEEEEESEEEEEETT-EEEEEETTCEEEEC--------TTCCEEEEECTTEEEEEEE
T ss_pred CCCcEEEEEEEeEEEEECCC-eEEEEcCCCEEEEC--------CCCEEEEEecCCeEEEEEe
Confidence 45689999999999998643 44558999977332 2234455566665555443
No 314
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Probab=23.99 E-value=93 Score=26.03 Aligned_cols=64 Identities=23% Similarity=0.232 Sum_probs=43.8
Q ss_pred ceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEEeCcEEEEEeCCCCeechhhhhcccCCCceeeEEEecceEEEEEEe
Q psy9025 140 RPVLYLPGDYICRKGEVGKEMYIVKTGQVQVVSGETVLATLTEGSVFGEISLLALAGTNRRTADVRSHGFSNLFVLN 216 (361)
Q Consensus 140 ~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~~~~~~~~l~~Gd~fGe~~ll~~~~~~~~~~~v~A~~~~~~~~l~ 216 (361)
....+.||..+-.-.-++....+|++|.+.- +. ..+.+||++=... + ...+..|.+.|.||..-
T Consensus 46 ~lvr~~pG~~~p~H~H~g~Ee~~VL~G~f~d--~~---~~~~~Gd~~~~P~------g--~~H~p~a~~gc~~~vk~ 109 (223)
T 3o14_A 46 SIVRYAPGSRFSAHTHDGGEEFIVLDGVFQD--EH---GDYPAGTYVRNPP------T--TSHVPGSAEGCTIFVKL 109 (223)
T ss_dssp EEEEECTTEECCCEECTTCEEEEEEEEEEEE--TT---EEEETTEEEEECT------T--CEECCEESSCEEEEEEE
T ss_pred EEEEECCCCCcccccCCCCEEEEEEEeEEEE--CC---eEECCCeEEEeCC------C--CccccEeCCCCEEEEEe
Confidence 4677899988776666678899999999763 22 4677888753221 2 23444557889988876
No 315
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=23.95 E-value=61 Score=29.20 Aligned_cols=69 Identities=19% Similarity=0.173 Sum_probs=45.5
Q ss_pred CCEEEeCCCCCCeEEEEEeeEEEEEeCcEEEEEeCCCCeechhhhhcccCCCceeeEEEecce-EEEEEEeH--HHHHHH
Q psy9025 147 GDYICRKGEVGKEMYIVKTGQVQVVSGETVLATLTEGSVFGEISLLALAGTNRRTADVRSHGF-SNLFVLNK--DDLNEA 223 (361)
Q Consensus 147 ge~I~~~G~~~~~ly~I~~G~v~v~~~~~~~~~l~~Gd~fGe~~ll~~~~~~~~~~~v~A~~~-~~~~~l~~--~~f~~l 223 (361)
|+.+-.--.+.+.+++|++|.+++.-++.....+++||+|=-.+ +.++ ++.+.++ ..++++.. +.+...
T Consensus 262 g~~~~~h~~~~~~~~~vleG~~~i~i~g~~~~~l~~Gd~~~iPa------g~~h--~~~~~~~~~~~l~~~~g~~g~~~~ 333 (350)
T 1juh_A 262 TVTVPTWSFPGACAFQVQEGRVVVQIGDYAATELGSGDVAFIPG------GVEF--KYYSEAYFSKVLFVSSGSDGLDQN 333 (350)
T ss_dssp TSCCCCBCCSSCEEEEEEESCEEEEETTSCCEEECTTCEEEECT------TCCE--EEEESSSSEEEEEEEESSSSHHHH
T ss_pred CCCCCcccCCCcEEEEEEeeEEEEEECCeEEEEeCCCCEEEECC------CCCE--EEEecCCeEEEEEEecCccchhhe
Confidence 55555555678899999999999985542246899999873322 3444 4445443 77777665 555554
No 316
>1x82_A Glucose-6-phosphate isomerase; cupin superfamily, hyperthermophIle, phosphoglucose isomerase, extremeophIle; HET: PA5; 1.50A {Pyrococcus furiosus} SCOP: b.82.1.7 PDB: 1x7n_A* 1x8e_A 1qxr_A* 1qxj_A* 1qy4_A* 2gc1_A* 2gc0_A* 2gc2_A* 2gc3_A* 3sxw_A 1j3q_A 1j3p_A 1j3r_A*
Probab=23.07 E-value=2.1e+02 Score=22.90 Aligned_cols=29 Identities=21% Similarity=0.497 Sum_probs=23.0
Q ss_pred CeEEEEEeeEEEEE-e---CcEEEEEeCCCCee
Q psy9025 158 KEMYIVKTGQVQVV-S---GETVLATLTEGSVF 186 (361)
Q Consensus 158 ~~ly~I~~G~v~v~-~---~~~~~~~l~~Gd~f 186 (361)
..+|+|++|.+.+. + ++.....+.+||++
T Consensus 97 ~E~~~Vl~G~~~~~i~~~~g~~~~~~l~~GD~v 129 (190)
T 1x82_A 97 AEVYVALKGKGGMLLQTPEGDAKWISMEPGTVV 129 (190)
T ss_dssp CEEEEEEESCEEEEEECTTCCEEEEEECTTCEE
T ss_pred CEEEEEEcCEEEEEEcCcCCcEEEEEECCCcEE
Confidence 69999999999987 2 22445789999977
No 317
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=22.37 E-value=1.6e+02 Score=27.74 Aligned_cols=58 Identities=17% Similarity=0.220 Sum_probs=39.3
Q ss_pred HHHHHHhcceEEeCCCCEEEeCC-CCCCeEEEEEeeEEEEE--e--CcEE-EEEeCCCCeechh
Q psy9025 132 LRELVLKLRPVLYLPGDYICRKG-EVGKEMYIVKTGQVQVV--S--GETV-LATLTEGSVFGEI 189 (361)
Q Consensus 132 l~~l~~~l~~~~~~~ge~I~~~G-~~~~~ly~I~~G~v~v~--~--~~~~-~~~l~~Gd~fGe~ 189 (361)
+..+--.+....+.+|.+...-= -.++.+++|++|.+.+. + +..+ -..+.+||+|=..
T Consensus 317 L~~l~iS~a~v~l~pG~~~~pH~Hp~A~Ei~yV~~G~~~v~vv~~~g~~~~~~~l~~GDv~v~P 380 (459)
T 2e9q_A 317 LRQVRLSAERGVLYSNAMVAPHYTVNSHSVMYATRGNARVQVVDNFGQSVFDGEVREGQVLMIP 380 (459)
T ss_dssp HHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEEEC
T ss_pred ccccccceEEEEeeCCcCccceECCCCCEEEEEEeeEEEEEEEeCCCCEEEeeEEeCCcEEEEC
Confidence 44444557778888888765322 23679999999998887 2 2233 3579999998443
No 318
>2oyz_A UPF0345 protein VPA0057; unknown function, structural genomi 2, protein structure initiative, midwest center for structu genomics, MCSG; 1.71A {Vibrio parahaemolyticus} SCOP: b.82.1.22
Probab=22.20 E-value=2.2e+02 Score=20.28 Aligned_cols=61 Identities=21% Similarity=0.336 Sum_probs=40.9
Q ss_pred EEeCCCCEEEeCCCCCCeEEEEEeeEEEEEe-CcEEEEEeCCCCeechhhhhcccCCCceeeEEEecceEEE
Q psy9025 142 VLYLPGDYICRKGEVGKEMYIVKTGQVQVVS-GETVLATLTEGSVFGEISLLALAGTNRRTADVRSHGFSNL 212 (361)
Q Consensus 142 ~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~-~~~~~~~l~~Gd~fGe~~ll~~~~~~~~~~~v~A~~~~~~ 212 (361)
-...||++=+. ......-=|++|.+.+.- ++..+..+.+|+.|-- ....+..+++.+.+.-
T Consensus 28 GVm~pGeytF~--T~~~E~M~vvsG~~~V~lpg~~ew~~~~aGesF~V--------pans~F~l~v~~~~~Y 89 (94)
T 2oyz_A 28 GVMLPGEYTFG--TQAPERMTVVKGALVVKRVGEADWTTYSSGESFDV--------EGNSSFELQVKDATAY 89 (94)
T ss_dssp EEECSEEEEEE--ESSCEEEEEEESEEEEEETTCSSCEEEETTCEEEE--------CSSEEEEEEESSCEEE
T ss_pred EEEeceEEEEc--CCCeEEEEEEEeEEEEEcCCCCcCEEECCCCEEEE--------CCCCEEEEEEcccEeE
Confidence 34567775444 456678889999999983 3345777889988854 3445666777666543
No 319
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=21.55 E-value=16 Score=32.74 Aligned_cols=17 Identities=18% Similarity=0.321 Sum_probs=16.0
Q ss_pred cceeehhhhhhhhcccc
Q psy9025 343 ECQVTVHREDIHESHIT 359 (361)
Q Consensus 343 ~a~v~~a~~~lH~~~i~ 359 (361)
+.+++.|++|||++||+
T Consensus 178 ~~qi~~~L~~lH~~~iv 194 (365)
T 3e7e_A 178 AMRMLYMIEQVHDCEII 194 (365)
T ss_dssp HHHHHHHHHHHHTTTEE
T ss_pred HHHHHHHHHHHhhCCee
Confidence 88999999999999987
No 320
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=20.95 E-value=17 Score=32.77 Aligned_cols=17 Identities=6% Similarity=0.153 Sum_probs=15.6
Q ss_pred cceeehhhhhhhhcccc
Q psy9025 343 ECQVTVHREDIHESHIT 359 (361)
Q Consensus 343 ~a~v~~a~~~lH~~~i~ 359 (361)
+.+++.|+.|||++||+
T Consensus 200 ~~qi~~aL~~LH~~~iv 216 (371)
T 3q60_A 200 TAQLIRLAANLQSKGLV 216 (371)
T ss_dssp HHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHHHHHHCCCc
Confidence 58999999999999986
No 321
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=20.86 E-value=2.2e+02 Score=25.86 Aligned_cols=49 Identities=10% Similarity=0.044 Sum_probs=34.5
Q ss_pred cceEEeCCCCEEEeCCCCCCeEEEEEeeEEE-EEeCcEEEEEeCCCCeech
Q psy9025 139 LRPVLYLPGDYICRKGEVGKEMYIVKTGQVQ-VVSGETVLATLTEGSVFGE 188 (361)
Q Consensus 139 l~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~-v~~~~~~~~~l~~Gd~fGe 188 (361)
+....+.||+.+-.--...+.+|||++|.-. ..-++ ....+++||+|=-
T Consensus 105 a~~~~l~PG~~~~~HrH~~~ev~~VleG~G~~~~vdG-~~~~~~~GD~v~i 154 (368)
T 3nw4_A 105 AAIQYLGPRETAPEHRHSQNAFRFVVEGEGVWTVVNG-DPVRMSRGDLLLT 154 (368)
T ss_dssp EEEEEECTTCEEEEEEESSCEEEECSSCEEEEEEETT-EEEEEETTCEEEE
T ss_pred EEEEEECCCCccCceecccceEEEEEecceEEEEECC-EEEEEeCCCEEEE
Confidence 4456788998877655566799999999975 33222 3456889998733
No 322
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=20.67 E-value=90 Score=28.76 Aligned_cols=47 Identities=11% Similarity=0.115 Sum_probs=36.6
Q ss_pred cceEEeCCCCEEEeCCCCCCeEEEEEeeEEEEE---eCcEEEEEeCCCCe
Q psy9025 139 LRPVLYLPGDYICRKGEVGKEMYIVKTGQVQVV---SGETVLATLTEGSV 185 (361)
Q Consensus 139 l~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~---~~~~~~~~l~~Gd~ 185 (361)
+....+.||..+...--.++.+++|++|...+. .+......+.+||+
T Consensus 54 ~~~~~l~pgg~~~ph~~~a~ei~yVl~G~~~v~~v~~~~~~~~~l~~GDv 103 (397)
T 2phl_A 54 LVEFRSKPETLLLPQQADAELLLVVRSGSAILVLVKPDDRREYFFLTSDN 103 (397)
T ss_dssp EEEEEECSSEEEEEEEESEEEEEEEEESEEEEEEEETTTEEEEEEEESSC
T ss_pred EEEEEECCCcCccCEecCCCeEEEEEeeeEEEEEEeCCCcEEEEECCCCc
Confidence 557788999887665557789999999998886 23345778999999
No 323
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=20.47 E-value=8.6 Score=33.27 Aligned_cols=37 Identities=8% Similarity=0.011 Sum_probs=22.0
Q ss_pred ccCchhhhh-------hhccCCCCCCCCc----cceeehhhhhhh--------hcccc
Q psy9025 321 YFHPKQQRR-------LLHQTPTGHNNSF----ECQVTVHREDIH--------ESHIT 359 (361)
Q Consensus 321 ~~~~l~~~~-------~~~~~~~~~~~~~----~a~v~~a~~~lH--------~~~i~ 359 (361)
++++.++.| ++++.+ +++.. +..++.|+.||| ++||+
T Consensus 75 ~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~iv 130 (303)
T 3gxj_A 75 QLWLVSDYHEHGSLFDYLNRYT--VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIA 130 (303)
T ss_dssp EEEEEEECCTTCCHHHHHHHCC--BCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CC
T ss_pred eeEEEEeccCCCCHHHHHhccC--cchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEe
Confidence 566666655 233333 44442 889999999999 88886
No 324
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=20.36 E-value=8.4 Score=34.08 Aligned_cols=34 Identities=6% Similarity=0.011 Sum_probs=23.1
Q ss_pred ccCchhhhh-------hhccCCCCCCCC----ccceeehhhhhhhhc
Q psy9025 321 YFHPKQQRR-------LLHQTPTGHNNS----FECQVTVHREDIHES 356 (361)
Q Consensus 321 ~~~~l~~~~-------~~~~~~~~~~~~----~~a~v~~a~~~lH~~ 356 (361)
.+|+.||.| .+++.+ +++. ++..++.|+.|||++
T Consensus 75 ~~~lV~Ey~~~gsL~~~l~~~~--l~~~~~~~i~~~ia~gl~ylH~~ 119 (303)
T 3hmm_A 75 QLWLVSDYHEHGSLFDYLNRYT--VTVEGMIKLALSTASGLAHLHME 119 (303)
T ss_dssp EEEEEEECCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHHCC
T ss_pred EEEEEecCCCCCcHHHHHHhCC--CCHHHHHHHHHHHHHHHHHHHHh
Confidence 456677766 344333 4444 277899999999987
No 325
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=20.34 E-value=21 Score=31.04 Aligned_cols=17 Identities=18% Similarity=0.047 Sum_probs=15.8
Q ss_pred cceeehhhhhhhhcccc
Q psy9025 343 ECQVTVHREDIHESHIT 359 (361)
Q Consensus 343 ~a~v~~a~~~lH~~~i~ 359 (361)
+..++.|+.|||++||+
T Consensus 126 ~~qi~~al~~lH~~~iv 142 (308)
T 3g33_A 126 MRQFLRGLDFLHANCIV 142 (308)
T ss_dssp HHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHCCcc
Confidence 78899999999999987
Done!