Query psy9026
Match_columns 81
No_of_seqs 102 out of 163
Neff 3.0
Searched_HMMs 29240
Date Fri Aug 16 17:07:44 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9026.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9026hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vko_A Inositol-3-phosphate sy 100.0 1.2E-33 4E-38 231.4 -0.5 69 13-81 56-124 (537)
2 1p1j_A Inositol-3-phosphate sy 100.0 2.8E-32 9.7E-37 223.1 0.1 68 14-81 45-113 (533)
3 3qvs_A MIPS, MYO-inositol-1-ph 99.2 4.1E-13 1.4E-17 106.7 -1.7 36 34-71 1-36 (392)
4 1gr0_A Inositol-3-phosphate sy 98.4 1.1E-08 3.7E-13 80.8 -1.8 42 28-72 12-53 (367)
5 3cin_A MYO-inositol-1-phosphat 96.2 0.00057 2E-08 54.0 -1.0 28 32-60 12-39 (394)
6 4gbm_A CURM sulfotransferase; 34.3 9 0.00031 26.5 0.1 32 28-61 28-59 (323)
7 1jb0_D Photosystem 1 reaction 22.3 23 0.00079 24.9 0.5 26 41-66 10-35 (138)
8 1xs1_A DCTP deaminase, deoxycy 19.1 57 0.002 22.4 2.0 24 54-78 113-136 (193)
9 1euw_A Dutpase, deoxyuridine 5 18.8 38 0.0013 22.7 1.0 64 4-78 28-98 (152)
10 2ccv_A Helix pomatia agglutini 17.6 1.1E+02 0.0037 19.2 2.9 34 3-36 58-93 (101)
No 1
>1vko_A Inositol-3-phosphate synthase; CE21227, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD; 2.30A {Caenorhabditis elegans} SCOP: c.2.1.3 d.81.1.3
Probab=99.97 E-value=1.2e-33 Score=231.39 Aligned_cols=69 Identities=33% Similarity=0.582 Sum_probs=67.8
Q ss_pred cceeeeeeeEEEEEecceecceEEEEEEeecCcccceeeeehhccccceeecCCCccCCCccEEEEeeC
Q psy9026 13 SPNCKPTSSVLNIRTQRKVSKVGVMLIGWGGNNGSTVTGAILANKHNLCWQSKDGLKKPNCPVTYIKTS 81 (81)
Q Consensus 13 ~~~v~P~~~~y~fkt~rkvpKlGvMLVG~GGNNGsTltA~ilANk~~lsW~TK~G~q~aNY~GSltqsS 81 (81)
++.|+|.+++|+|||+|||||+||||||||||||||++||++|||++|+|+||+|+++|||||||||+|
T Consensus 56 ~~~~~p~~~~~~f~~~~~~~k~GvmlVG~gGn~~TT~~aG~~A~r~gl~~~tk~g~~~~ny~GSltq~s 124 (537)
T 1vko_A 56 GLHVTPKEHDYSFKTVLKPRKTGLLLVGLGGNNGSTAVGSIFANQYAMTWRTKEGHSQANYFGSVTQTA 124 (537)
T ss_dssp EEEEEEEEEEEEEEEECSCCCEEEEEETTTSHHHHHHHHHHHHHHTTCEEEETTEEEECCCTTCHHHHC
T ss_pred ceEEEEEEEEEEEEeecccCceEEEEEecCccHHHHHHHHHHHHHcCCCcccccCccCCccccceeeee
Confidence 678999999999999999999999999999999999999999999999999999999999999999987
No 2
>1p1j_A Inositol-3-phosphate synthase; 1L-MYO-inositol 1-phosphate, NADH, isomerase, rossmann fold; HET: NAI; 1.70A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.3 PDB: 1jkf_A* 1la2_A* 1p1f_A 1jki_A* 1p1i_A* 1p1h_A* 1p1k_A* 1rm0_A*
Probab=99.97 E-value=2.8e-32 Score=223.09 Aligned_cols=68 Identities=43% Similarity=0.656 Sum_probs=66.9
Q ss_pred ceeeeeeeEEEEEecceec-ceEEEEEEeecCcccceeeeehhccccceeecCCCccCCCccEEEEeeC
Q psy9026 14 PNCKPTSSVLNIRTQRKVS-KVGVMLIGWGGNNGSTVTGAILANKHNLCWQSKDGLKKPNCPVTYIKTS 81 (81)
Q Consensus 14 ~~v~P~~~~y~fkt~rkvp-KlGvMLVG~GGNNGsTltA~ilANk~~lsW~TK~G~q~aNY~GSltqsS 81 (81)
+.|+|.+++|+|||+|||| |+||||||||||||||++||++|||++|+|+||+|+++|||||||||+|
T Consensus 45 ~~~~p~~~~~~f~~~~~~p~k~GvmlVG~gGn~~TT~~aG~~A~r~gl~~~tk~g~~~pny~GS~tq~s 113 (533)
T 1p1j_A 45 FDVTPTVQDYVFKLDLKKPEKLGIMLIGLGGNNGSTLVASVLANKHNVEFQTKEGVKQPNYFGSMTQCS 113 (533)
T ss_dssp EEEEEEEEEEEEEEECCCCSSEEEEEETTTSHHHHHHHHHHHHHHTTCCEEETTEEECCCCTTCHHHHC
T ss_pred EEEEEeeeeEEEEecccCCcceEEEEEecCccHHHHHHHHHHHHHcCCCcccCCccccCccccceeeee
Confidence 6899999999999999999 9999999999999999999999999999999999999999999999986
No 3
>3qvs_A MIPS, MYO-inositol-1-phosphate synthase (INO1); NAD binding rossmann fold, L-MYO-inositol 1-phosphate syntha isomerase; HET: NAD PG4; 1.70A {Archaeoglobus fulgidus} PDB: 1u1i_A* 3qvt_A* 3qvw_A* 3qvx_A* 3qw2_A*
Probab=99.23 E-value=4.1e-13 Score=106.69 Aligned_cols=36 Identities=22% Similarity=0.159 Sum_probs=33.8
Q ss_pred eEEEEEEeecCcccceeeeehhccccceeecCCCccCC
Q psy9026 34 VGVMLIGWGGNNGSTVTGAILANKHNLCWQSKDGLKKP 71 (81)
Q Consensus 34 lGvMLVG~GGNNGsTltA~ilANk~~lsW~TK~G~q~a 71 (81)
+||||||||||||||++||++|||++|+|.| |.+.+
T Consensus 1 ~Gv~lvG~gG~vaTT~~aG~~A~k~gl~~~~--G~~~~ 36 (392)
T 3qvs_A 1 MKVWLVGAYGIVSTTAMVGARAIERGIAPKI--GLVSE 36 (392)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHHTTCSCCT--TCGGG
T ss_pred CceEEecCCccHHHHHHHHHHHHHcCCCCcc--ccccc
Confidence 5999999999999999999999999999988 88775
No 4
>1gr0_A Inositol-3-phosphate synthase; isomerase, oxidoreductase, PSI, protein structure initiative, TB structural genomics consortium, TB; HET: NAD; 1.95A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3
Probab=98.44 E-value=1.1e-08 Score=80.83 Aligned_cols=42 Identities=17% Similarity=0.162 Sum_probs=37.1
Q ss_pred cceecceEEEEEEeecCcccceeeeehhccccceeecCCCccCCC
Q psy9026 28 QRKVSKVGVMLIGWGGNNGSTVTGAILANKHNLCWQSKDGLKKPN 72 (81)
Q Consensus 28 ~rkvpKlGvMLVG~GGNNGsTltA~ilANk~~lsW~TK~G~q~aN 72 (81)
+++.+|+|+ ||| ||+||||++||+|||++++|++++|+...+
T Consensus 12 ~~~~~rVaI--VGv-GN~GsaLv~Gi~~yk~~~~~~~~~Gl~~~~ 53 (367)
T 1gr0_A 12 ASTEVRVAI--VGV-GNCASSLVQGVEYYYNADDTSTVPGLMHVR 53 (367)
T ss_dssp --CCEEEEE--ECC-SHHHHHHHHHHHHTTTCCTTSCCTTCSCSE
T ss_pred hccCCCEEE--ECc-ChHHHHHHHHHHHHhccCcccccCCccccc
Confidence 467778877 999 999999999999999999999999988775
No 5
>3cin_A MYO-inositol-1-phosphate synthase-related protein; structura genomics, joint center for structural genomics, JCSG; HET: NAD; 1.70A {Thermotoga maritima MSB8}
Probab=96.16 E-value=0.00057 Score=53.97 Aligned_cols=28 Identities=21% Similarity=0.278 Sum_probs=25.5
Q ss_pred cceEEEEEEeecCcccceeeeehhccccc
Q psy9026 32 SKVGVMLIGWGGNNGSTVTGAILANKHNL 60 (81)
Q Consensus 32 pKlGvMLVG~GGNNGsTltA~ilANk~~l 60 (81)
.-++|||||. ||++||+.+|+.|+|.++
T Consensus 12 ~mIrVaIvGv-GnvASTlvqGv~~~r~g~ 39 (394)
T 3cin_A 12 HMVKVLILGQ-GYVASTFVAGLEKLRKGE 39 (394)
T ss_dssp CCEEEEEECC-SHHHHHHHHHHHHHHTTS
T ss_pred ceeEEEEecC-CHHHHHHHHHHHHHHcCC
Confidence 3589999997 999999999999999885
No 6
>4gbm_A CURM sulfotransferase; polyketide synthase, curacin, PAP, PAPS; HET: A3P P6G; 1.62A {Moorea producta}
Probab=34.26 E-value=9 Score=26.46 Aligned_cols=32 Identities=19% Similarity=0.403 Sum_probs=23.5
Q ss_pred cceecceEEEEEEeecCcccceeeeehhccccce
Q psy9026 28 QRKVSKVGVMLIGWGGNNGSTVTGAILANKHNLC 61 (81)
Q Consensus 28 ~rkvpKlGvMLVG~GGNNGsTltA~ilANk~~ls 61 (81)
.++.|.+ |.+||.. -.|||++..+|+..-.|.
T Consensus 28 ~~~~P~~-IFIvG~p-RSGTTlL~~iL~~Hp~v~ 59 (323)
T 4gbm_A 28 SSRLPGI-IFILSSP-RSGSTLLRVMLAGHSSLF 59 (323)
T ss_dssp -CCEECC-EEEEECT-TSSHHHHHHHHHTCTTEE
T ss_pred cCCCCCc-EEEECCC-CCHHHHHHHHHHcCCCcc
Confidence 4456666 7788875 899999999998754443
No 7
>1jb0_D Photosystem 1 reaction centre subunit II; membrane protein, multiprotein-pigment complex, photosynthes; HET: CL1 PQN BCR LHG LMG; 2.50A {Synechococcus elongatus} SCOP: d.187.1.1 PDB: 3pcq_D*
Probab=22.27 E-value=23 Score=24.89 Aligned_cols=26 Identities=27% Similarity=0.587 Sum_probs=23.6
Q ss_pred eecCcccceeeeehhccccceeecCC
Q psy9026 41 WGGNNGSTVTGAILANKHNLCWQSKD 66 (81)
Q Consensus 41 ~GGNNGsTltA~ilANk~~lsW~TK~ 66 (81)
+||+.|-=|.+|-...|+-|+|.++.
T Consensus 10 fgGSTGGlL~~A~~EEkYaITWtS~k 35 (138)
T 1jb0_D 10 YGGSTGGLLSAADTEEKYAITWTSPK 35 (138)
T ss_dssp CCCBTTSBCTHHHHTCEEEEEEEESS
T ss_pred cccccccccccccceeeEEEEecCCh
Confidence 58999999999999999999999875
No 8
>1xs1_A DCTP deaminase, deoxycytidine triphosphate deaminase; nucleotide metabolism, trimer, hydrolase; HET: DUT; 1.80A {Escherichia coli} SCOP: b.85.4.1 PDB: 2v9x_A* 1xs6_A* 1xs4_A* 2j4q_A* 2j4h_A*
Probab=19.14 E-value=57 Score=22.45 Aligned_cols=24 Identities=17% Similarity=0.126 Sum_probs=20.7
Q ss_pred hhccccceeecCCCccCCCccEEEE
Q psy9026 54 LANKHNLCWQSKDGLKKPNCPVTYI 78 (81)
Q Consensus 54 lANk~~lsW~TK~G~q~aNY~GSlt 78 (81)
|| |++|.=++--|+-+|.|-|.++
T Consensus 113 la-r~Gl~v~~t~G~ID~gy~G~i~ 136 (193)
T 1xs1_A 113 LA-RLGLMVHVTAHRIDPGWSGCIV 136 (193)
T ss_dssp HH-TTTEESCSSCCEECTTCEEEEE
T ss_pred cc-cCCEEEeCCCCeECCCCCcEEE
Confidence 67 8898888777999999999876
No 9
>1euw_A Dutpase, deoxyuridine 5'-triphosphate nucleotidohydrolase; jelly roll, mercury derivative; 1.05A {Escherichia coli} SCOP: b.85.4.1 PDB: 1dud_A 1dup_A 1eu5_A 1rn8_A* 1seh_A* 2hr6_A* 2hrm_A* 1rnj_A* 1syl_A*
Probab=18.76 E-value=38 Score=22.75 Aligned_cols=64 Identities=17% Similarity=0.268 Sum_probs=37.9
Q ss_pred ccceEEEEe---cceeeeeeeEEEEEeccee--cc--eEEEEEEeecCcccceeeeehhccccceeecCCCccCCCccEE
Q psy9026 4 SQNLNVLVE---SPNCKPTSSVLNIRTQRKV--SK--VGVMLIGWGGNNGSTVTGAILANKHNLCWQSKDGLKKPNCPVT 76 (81)
Q Consensus 4 ~~~~~~~~~---~~~v~P~~~~y~fkt~rkv--pK--lGvMLVG~GGNNGsTltA~ilANk~~lsW~TK~G~q~aNY~GS 76 (81)
|-|+.+..- .+.+.|-+ .+.+.|..++ |. .-.++.+= .| ||-|++|.=.+--|+-+|.|-|.
T Consensus 28 ~aG~DL~a~~~~~~~l~Pg~-~~lv~Tg~~i~iP~~g~~~~i~pR---Ss-------la~k~Gi~v~n~~GvID~dYrGe 96 (152)
T 1euw_A 28 SAGLDLRACLNDAVELAPGD-TTLVPTGLAIHIADPSLAAMMLPR---SG-------LGHKHGIVLGNLVGLIDSDYQGQ 96 (152)
T ss_dssp CCCEEEECCCSSCEEECTTC-EEEEEEEEEEECCCTTEEEEEEEC---HH-------HHHHHCEEETTSSEEECTTCCSE
T ss_pred CceEEEEEcCCCCEEECCCC-EEEEEcceEEECCCCCEEEEEEec---CC-------ccccCCEEEeCCceEECCCCCCc
Confidence 344554432 14555544 4566666543 33 33333332 22 56688888777789999999998
Q ss_pred EE
Q psy9026 77 YI 78 (81)
Q Consensus 77 lt 78 (81)
|.
T Consensus 97 i~ 98 (152)
T 1euw_A 97 LM 98 (152)
T ss_dssp EE
T ss_pred EE
Confidence 74
No 10
>2ccv_A Helix pomatia agglutinin; lectin, snail; HET: A2G NAG; 1.30A {Helix pomatia} SCOP: b.154.1.1 PDB: 2cgy_A* 2cgz_A* 2ce6_A
Probab=17.62 E-value=1.1e+02 Score=19.22 Aligned_cols=34 Identities=26% Similarity=0.304 Sum_probs=26.0
Q ss_pred cccceEEEEecceeeeeeeEEEEEe--cceecceEE
Q psy9026 3 NSQNLNVLVESPNCKPTSSVLNIRT--QRKVSKVGV 36 (81)
Q Consensus 3 ~~~~~~~~~~~~~v~P~~~~y~fkt--~rkvpKlGv 36 (81)
+++++.+.++-..|++..=+..|+| +.++.++.+
T Consensus 58 ~~~n~R~~v~a~~VT~tGF~i~f~TW~dt~v~~~~v 93 (101)
T 2ccv_A 58 QSQNLRVIARLYSVSPSGFKASCYTWHNTKVYSMSI 93 (101)
T ss_dssp TTSCCCCEEEEEEEETTEEEEEEEECTTCCEEEEEE
T ss_pred CCccEEEEEEEEEecCCCeEEEEEEccCCEEEEEEE
Confidence 3466777777888999888888998 567777654
Done!