RPS-BLAST 2.2.26 [Sep-21-2011]
Database: CDD.v3.10
44,354 sequences; 10,937,602 total letters
Searching..................................................done
Query= psy9026
(81 letters)
>gnl|CDD|178057 PLN02438, PLN02438, inositol-3-phosphate synthase.
Length = 510
Score = 88.2 bits (219), Expect = 2e-22
Identities = 29/56 (51%), Positives = 41/56 (73%)
Query: 17 KPTSSVLNIRTQRKVSKVGVMLIGWGGNNGSTVTGAILANKHNLCWQSKDGLKKPN 72
KP + +T R+V K+GVML+GWGGNNGST+T ++ANK + W +KDG++K N
Sbjct: 45 KPKTVKYEFKTDRRVPKLGVMLVGWGGNNGSTLTAGVIANKEGISWATKDGVQKAN 100
>gnl|CDD|219688 pfam07994, NAD_binding_5, Myo-inositol-1-phosphate synthase.
This is a family of myo-inositol-1-phosphate synthases.
Inositol-1-phosphate catalyzes the conversion of
glucose-6- phosphate to inositol-1-phosphate, which is
then dephosphorylated to inositol. Inositol phosphates
play an important role in signal transduction.
Length = 389
Score = 56.9 bits (138), Expect = 3e-11
Identities = 17/29 (58%), Positives = 19/29 (65%)
Query: 34 VGVMLIGWGGNNGSTVTGAILANKHNLCW 62
VGV L+G GGNN ST+ I ANK L W
Sbjct: 1 VGVALVGVGGNNASTLVAGIEANKKGLSW 29
>gnl|CDD|237163 PRK12663, PRK12663, putative monovalent cation/H+ antiporter
subunit D; Reviewed.
Length = 497
Score = 27.6 bits (62), Expect = 0.53
Identities = 7/23 (30%), Positives = 13/23 (56%)
Query: 31 VSKVGVMLIGWGGNNGSTVTGAI 53
+S +G +L+G + + GAI
Sbjct: 305 ISSIGFILLGLALGTPAGINGAI 327
>gnl|CDD|237377 PRK13405, bchH, magnesium chelatase subunit H; Provisional.
Length = 1209
Score = 27.7 bits (62), Expect = 0.62
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 26 RTQRKVSKVGVMLIGWGGNNGSTVTGAILA 55
R++R KV V+L + N G+T T A L+
Sbjct: 433 RSERAERKVAVVLFNFPPNAGATGTAAYLS 462
>gnl|CDD|215624 PLN03191, PLN03191, Type I inositol-1,4,5-trisphosphate
5-phosphatase 2; Provisional.
Length = 621
Score = 27.6 bits (61), Expect = 0.66
Identities = 12/18 (66%), Positives = 14/18 (77%)
Query: 30 KVSKVGVMLIGWGGNNGS 47
KVS VGV L+G+ GN GS
Sbjct: 393 KVSPVGVGLMGYMGNKGS 410
>gnl|CDD|181085 PRK07691, PRK07691, putative monovalent cation/H+ antiporter
subunit D; Reviewed.
Length = 496
Score = 27.2 bits (61), Expect = 0.85
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 31 VSKVGVMLIGWGGNNGSTVTGAI 53
+ VGV+L+G S + GAI
Sbjct: 308 MIAVGVILVGVAMMTESGMIGAI 330
>gnl|CDD|236251 PRK08375, PRK08375, putative monovalent cation/H+ antiporter
subunit D; Reviewed.
Length = 487
Score = 26.0 bits (58), Expect = 2.0
Identities = 6/24 (25%), Positives = 12/24 (50%)
Query: 31 VSKVGVMLIGWGGNNGSTVTGAIL 54
VS++G +L+G + +L
Sbjct: 304 VSQMGYILLGLALLTPLALAAGLL 327
>gnl|CDD|224180 COG1260, INO1, Myo-inositol-1-phosphate synthase [Lipid
metabolism].
Length = 362
Score = 26.1 bits (58), Expect = 2.0
Identities = 10/28 (35%), Positives = 12/28 (42%), Gaps = 1/28 (3%)
Query: 30 KVSKVGVMLIGWGGNNGSTVTGAILANK 57
+ V V +IG G S V G I K
Sbjct: 2 TTTMVRVAIIGVGNCASSLVQG-IEYYK 28
>gnl|CDD|177665 PLN00028, PLN00028, nitrate transmembrane transporter; Provisional.
Length = 476
Score = 25.3 bits (56), Expect = 3.9
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 38 LIGWGGNNGSTVTGAIL 54
L G GGN G+ +T +
Sbjct: 387 LTGAGGNVGAVLTQLLF 403
>gnl|CDD|239778 cd04245, AAK_AKiii-YclM-BS, AAK_AKiii-YclM-BS: Amino Acid Kinase
Superfamily (AAK), AKiii-YclM-BS; this CD includes the
N-terminal catalytic aspartokinase (AK) domain of the
lysine plus threonine-sensitive aspartokinase isoenzyme
AKIII, a monofunctional class enzyme found in Bacilli
(Bacillus subtilis YclM) and Clostridia species.
Aspartokinase is the first enzyme in the aspartate
metabolic pathway and catalyzes the conversion of
aspartate and ATP to aspartylphosphate and ADP. In
Bacillus subtilis (BS), YclM is reported to be a single
polypeptide of 50 kD. The Bacillus subtilis 168 AKIII is
induced by lysine and repressed by threonine, and it is
synergistically inhibited by lysine and threonine.
Length = 288
Score = 25.3 bits (56), Expect = 4.2
Identities = 8/11 (72%), Positives = 9/11 (81%)
Query: 46 GSTVTGAILAN 56
GS +TGAILA
Sbjct: 198 GSDITGAILAR 208
>gnl|CDD|214459 MTH00211, ND5, NADH dehydrogenase subunit 5; Provisional.
Length = 597
Score = 24.9 bits (55), Expect = 4.8
Identities = 9/25 (36%), Positives = 11/25 (44%), Gaps = 3/25 (12%)
Query: 34 VGVM---LIGWGGNNGSTVTGAILA 55
VG+M LI W T A+ A
Sbjct: 142 VGIMSFLLISWWYGRSDANTAALQA 166
>gnl|CDD|236364 PRK09034, PRK09034, aspartate kinase; Reviewed.
Length = 454
Score = 24.8 bits (55), Expect = 5.1
Identities = 8/11 (72%), Positives = 9/11 (81%)
Query: 46 GSTVTGAILAN 56
GS +TGAILA
Sbjct: 198 GSDITGAILAR 208
>gnl|CDD|222930 PHA02786, PHA02786, uncharacterized protein; Provisional.
Length = 192
Score = 25.0 bits (54), Expect = 5.2
Identities = 11/30 (36%), Positives = 20/30 (66%)
Query: 5 QNLNVLVESPNCKPTSSVLNIRTQRKVSKV 34
+N+++L S CK S++L T RK+++V
Sbjct: 109 KNMSILGVSIECKKPSTLLTFLTVRKMTRV 138
Database: CDD.v3.10
Posted date: Mar 20, 2013 7:55 AM
Number of letters in database: 10,937,602
Number of sequences in database: 44,354
Lambda K H
0.313 0.128 0.391
Gapped
Lambda K H
0.267 0.0745 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 44354
Number of Hits to DB: 3,549,267
Number of extensions: 250534
Number of successful extensions: 166
Number of sequences better than 10.0: 1
Number of HSP's gapped: 166
Number of HSP's successfully gapped: 13
Length of query: 81
Length of database: 10,937,602
Length adjustment: 50
Effective length of query: 31
Effective length of database: 8,719,902
Effective search space: 270316962
Effective search space used: 270316962
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 53 (24.2 bits)