Query psy9027
Match_columns 448
No_of_seqs 166 out of 503
Neff 4.6
Searched_HMMs 29240
Date Fri Aug 16 17:08:48 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9027.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9027hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vko_A Inositol-3-phosphate sy 100.0 5E-145 2E-149 1132.2 29.5 404 1-448 80-494 (537)
2 1p1j_A Inositol-3-phosphate sy 100.0 2E-144 6E-149 1127.1 32.4 406 1-448 69-499 (533)
3 3qvs_A MIPS, MYO-inositol-1-ph 100.0 4E-119 1E-123 916.0 29.9 353 1-446 4-375 (392)
4 3cin_A MYO-inositol-1-phosphat 100.0 4.6E-93 1.6E-97 728.4 19.5 340 1-448 17-374 (394)
5 1gr0_A Inositol-3-phosphate sy 100.0 1.7E-93 5.7E-98 722.8 12.5 319 2-445 20-353 (367)
6 1vjp_A MYO-inositol-1-phosphat 100.0 1.8E-85 6.2E-90 666.8 26.2 334 1-446 17-373 (394)
7 1vjp_A MYO-inositol-1-phosphat 98.6 1.6E-10 5.6E-15 118.1 -10.8 140 135-299 50-216 (394)
8 1gr0_A Inositol-3-phosphate sy 98.0 3.1E-08 1.1E-12 100.9 -10.6 135 135-301 54-195 (367)
9 3cin_A MYO-inositol-1-phosphat 96.1 3.5E-05 1.2E-09 79.4 -10.6 145 138-300 53-217 (394)
10 2kxe_A DNA polymerase II small 32.9 31 0.0011 27.4 3.0 62 229-300 7-69 (75)
11 3fgn_A Dethiobiotin synthetase 31.9 36 0.0012 32.3 4.0 45 268-312 27-71 (251)
12 3of5_A Dethiobiotin synthetase 29.6 30 0.001 31.9 3.0 42 268-309 5-46 (228)
13 3qxc_A Dethiobiotin synthetase 25.5 38 0.0013 31.9 2.8 43 268-310 22-64 (242)
14 1eye_A DHPS 1, dihydropteroate 21.7 67 0.0023 31.2 3.8 60 244-303 90-175 (280)
No 1
>1vko_A Inositol-3-phosphate synthase; CE21227, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD; 2.30A {Caenorhabditis elegans} SCOP: c.2.1.3 d.81.1.3
Probab=100.00 E-value=4.5e-145 Score=1132.19 Aligned_cols=404 Identities=60% Similarity=0.999 Sum_probs=394.2
Q ss_pred CcccCCCchHHHHHHHHHHHhcCCCccccCCCCCCCCcccccccceeeecccCC-CccccccCcCCCCCCCCCCeeEeee
Q psy9027 1 MLIGWGGNNGSTVTGAILANKHNLCWQSKDGLKKPNWYGSITQSSTVRLGMDSS-GKDVYVPMNSLLPMVDPDDIVLDGW 79 (448)
Q Consensus 1 ~lvG~gg~~~tt~~ag~~a~k~~l~~~~~~g~~~~~~~Gs~tq~~~~~~g~~~~-~~~~~~p~~~~~p~~~~~d~v~ggw 79 (448)
||||||||||||++||++|||+||+|+||+|+++||||||+||+||||||++++ |+++|+||+++|||++|+|||||||
T Consensus 80 mlVG~gGn~~TT~~aG~~A~r~gl~~~tk~g~~~~ny~GSltq~stirlG~~~~tg~~~~~p~~~~lpl~~p~dlVfGGw 159 (537)
T 1vko_A 80 LLVGLGGNNGSTAVGSIFANQYAMTWRTKEGHSQANYFGSVTQTATVHLGYDSATQNQIFVPFKDIVPILSPNDLIISGW 159 (537)
T ss_dssp EEETTTSHHHHHHHHHHHHHHTTCEEEETTEEEECCCTTCHHHHCEEEEEEETTTTEEEEEEGGGTSCCCCGGGEEEEEE
T ss_pred EEEecCccHHHHHHHHHHHHHcCCCcccccCccCCccccceeeeeeEeeccccCCCcccccchhccCCCCChhhEEEecc
Confidence 799999999999999999999999999999999999999999999999999997 8899999999999999999999999
Q ss_pred eCCCCCHHHHHHHCCCCChhHHhhhhhhhhcccccCccCChHHHhhhhccCCCCCCCCCh-HHHHHHHHHHHHhhhhcCC
Q psy9027 80 DISSVNLADAMERSKVLDFNLQIQLRPYMEHMKPRPSIYFPEFIAANQAGRADNVLSGTK-QEVLDQVRRDIRDFKQKNS 158 (448)
Q Consensus 80 Di~~~~l~~a~~~a~vl~~~l~~~~~~~l~~~~p~~~i~~~~~~~~~~~~r~~~~~~G~~-~~~ie~v~aDI~~fK~~~~ 158 (448)
||+++||+|||.||+|||++||+||+|+|++|+|+|+||+|+||++||.+|++|+++|++ ++++|+||+|||+||..++
T Consensus 160 DI~~~nl~~a~~rA~VLd~~l~~~v~~~l~~i~p~p~i~~~~fia~nq~~ra~nv~~g~~~~e~ve~ir~DIr~Fk~~~~ 239 (537)
T 1vko_A 160 DISDSNLYEAMGRAKVFEPELQEKLRPFMEPIVPLPSIYYPDFIASNQGDRANNVIPGDNKLEHLEHIRADIRKFKQEHE 239 (537)
T ss_dssp CSSCCCTTHHHHHHTCSCHHHHHHHHHHHTTCCCBCBCCCGGGSCGGGGGGCCSBCCSSCHHHHHHHHHHHHHHHHHHHT
T ss_pred cCCCCCHHHHHHHCCCCCHHHHHHHHHHHHhCCcCCcccCHHHHhhhcccccccccCCCCHHHHHHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999999999999999999999999986 8999999999999999999
Q ss_pred CCceEEEecCccccccccccCCCccccccccccccccccccccchhhhhhhccccccchhhhhhhhhHHHHHHHhhcCCC
Q psy9027 159 LDQVIVLWTANTERFSDIVQGLNDTAENLLEGVAVNNICRGFYDQVIVLWTANTERFSDIVQGLNDTAENLLESIQKNAA 238 (448)
Q Consensus 159 L~~aIv~~~n~Te~~~~~vp~~~v~~~~~ldgv~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~l~~t~~~ll~~L~~g~~ 238 (448)
||++||+|++|||||++ +.+++|+|.++|+++|..+++
T Consensus 240 ldrvVVlwtAsTE~~~~------------------------------------------~~~g~~~t~~~L~~ai~~~~~ 277 (537)
T 1vko_A 240 LECVIVLWTANTERYTD------------------------------------------VRQGLNATADEIMESIRVNED 277 (537)
T ss_dssp CSEEEEEECSCCCCCCC------------------------------------------CCTTTTSSHHHHHHHHHTTCS
T ss_pred CCeEEEEeCCCCcCCCC------------------------------------------CccccccCHHHHHHHHhcCCc
Confidence 99999999999999998 457789999999999999999
Q ss_pred ccChhHHHHHHHHHcCCCCCcc---------hHHHHHHcCCceecCCCCCCcchhhHHHHHHHHHcCCceeEEEeeeecC
Q psy9027 239 EVSPSTIFAVASILEGNTFVPG---------AIDLAEKKKVFIAGDDFKSGQTKVKSVLVDFLVTAGIKPVSIVSYNHLG 309 (448)
Q Consensus 239 ei~aS~~YA~AAl~aG~afVna---------~~elae~~gvpi~GDD~KSGqT~lksvLa~~l~~RGlkv~~~~q~NilG 309 (448)
+||||++||+|||+|||+|||| |+|+|+++|+||+|||||||||++||+|++||++||++|++||||||||
T Consensus 278 eisaS~~YA~AAl~aG~~FIN~sP~~~~~P~~~elae~~gvpI~GDD~KSGqT~lksvLa~~l~~RGlkv~~~~s~NilG 357 (537)
T 1vko_A 278 EVSPSNIFAVASILEGAHYINGSPQNTLVPGLIELAERHKVFVGGDDFKSGQTKFKSAFVDFLVSSGMKPESIVSYNHLG 357 (537)
T ss_dssp SCCHHHHHHHHHHHTTCEEEECSSSCCCCHHHHHHHHHHTCCEECSCBCCSHHHHHHHHHHHHHHTTCEEEEEEEEEEEC
T ss_pred cCChHHHHHHHHHhcCCceeecCCcccCCHHHHHHHHHhCCceeccccccCCchhHHHHHHHHHHcCCceeEEEEEEecc
Confidence 9999999999999999877765 9999999999999999999999999999999999999999999999999
Q ss_pred CcccccCCccchhhhhhhhhhhhHHHhhhcccccCCCCCCCCceeeecccCCCCCceEEEEEEEeeecCCCeeEEEEEee
Q psy9027 310 NNDGYNLSAPQQFRSKEISKSNVVDDMVASNSILYRPGEKPDHTVVIKYVPYVGDSKRALDEYTSEILLGGHNTISMHNT 389 (448)
Q Consensus 310 N~Df~NL~~p~r~~SK~iSKs~vv~~il~~~~~Ly~~g~~~~h~v~idYvP~lGD~K~A~d~ie~~~FlG~~~~i~~~l~ 389 (448)
||||+||++|+||+|||+||+++|++|++++++||++|++++|+++|||||||||+|+|||+|++++|||+||+|+++|+
T Consensus 358 N~Dg~NL~~p~~~~SKeiSKs~vV~dil~~~~~lY~~G~~~dh~V~IdYVP~lGD~K~A~d~~~~~~FlG~~~~I~i~~~ 437 (537)
T 1vko_A 358 NNDGKNLSEARQFRSKEISKSSVVDDMVKSNQILFPDAKNPDYCVVIKYVPYVADSKRAMDEYICSIFMGGKQTFVVHNT 437 (537)
T ss_dssp SHHHHHTTSHHHHHHHHHHHHTTTHHHHHHCTTTCTTCCCCEEEECCEECGGGTTEEEEEEEEEEECGGGCEEEEEEEEE
T ss_pred CcchhhhCCHhhhhhhhhHHHHHHHHHhccCcccccCCCCCCCceEEeecCCCCCcEEEEEEEEEeeecCCcEEEEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCcccchhHHHHHHHHHHHhhhhcccCCCccccccccchhHHHhhhhcCCCCCCCCCC
Q psy9027 390 CEDSLLASPLILDLIILAELSSRIQFTSPTVAEYTYFHPVLSILSYLCKAPLVPPETSI 448 (448)
Q Consensus 390 ~~DS~lAAplvIDliRl~~lA~r~~~~g~~~~~~~~~g~v~~~lsy~~K~P~~~~~~~~ 448 (448)
|+|||||||||||||||+|||+|+|++|. .+|+.+++|+++||||||+||+|+|+++
T Consensus 438 ~~DS~lAApliIDLvrlaklA~r~g~~g~--~~~~~~~~v~s~lSy~fKsP~~~~g~~~ 494 (537)
T 1vko_A 438 CEDSLLASPLIYDLAILTELASRVSYKVD--DEYKPFHSVLSILSLLLKAPVVPPGTPI 494 (537)
T ss_dssp EEHHHHHHHHHHHHHHHHHHHTTEEEESS--SSEECCCSBCGGGGGGBSSCCCSTTSCC
T ss_pred EecchhhHHHHHHHHHHHHHHHhcccCCc--cccccccchhhHHHHHccCCCCCCCCCC
Confidence 99999999999999999999999999875 7899999999999999999999998764
No 2
>1p1j_A Inositol-3-phosphate synthase; 1L-MYO-inositol 1-phosphate, NADH, isomerase, rossmann fold; HET: NAI; 1.70A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.3 PDB: 1jkf_A* 1la2_A* 1p1f_A 1jki_A* 1p1i_A* 1p1h_A* 1p1k_A* 1rm0_A*
Probab=100.00 E-value=1.7e-144 Score=1127.06 Aligned_cols=406 Identities=60% Similarity=1.000 Sum_probs=394.9
Q ss_pred CcccCCCchHHHHHHHHHHHhcCCCccccCCCCCCCCcccccccceeeecccCCCccccccCcCCCCCCCCCCeeEeeee
Q psy9027 1 MLIGWGGNNGSTVTGAILANKHNLCWQSKDGLKKPNWYGSITQSSTVRLGMDSSGKDVYVPMNSLLPMVDPDDIVLDGWD 80 (448)
Q Consensus 1 ~lvG~gg~~~tt~~ag~~a~k~~l~~~~~~g~~~~~~~Gs~tq~~~~~~g~~~~~~~~~~p~~~~~p~~~~~d~v~ggwD 80 (448)
||||||||||||++||++|||+||+|+||+|+++||||||+||+||||||.+++|+++|+||+++|||++|+||||||||
T Consensus 69 mlVG~gGn~~TT~~aG~~A~r~gl~~~tk~g~~~pny~GS~tq~stirlG~~~~~~~~~~p~~~~lpl~~p~dlVfGGWD 148 (533)
T 1p1j_A 69 MLIGLGGNNGSTLVASVLANKHNVEFQTKEGVKQPNYFGSMTQCSTLKLGIDAEGNDVYAPFNSLLPMVSPNDFVVSGWD 148 (533)
T ss_dssp EEETTTSHHHHHHHHHHHHHHTTCCEEETTEEECCCCTTCHHHHCEEEEEECTTSCEEEEEGGGSSCCCCGGGEEEEEEC
T ss_pred EEEecCccHHHHHHHHHHHHHcCCCcccCCccccCccccceeeeeeeeecccCCCCcccCchhhcCCCCChhheEEeccc
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHCCCCChhHHhhhhhhhhcccccCccCChHHHhhhhccCCCCCC--------CCCh-HHHHHHHHHHHH
Q psy9027 81 ISSVNLADAMERSKVLDFNLQIQLRPYMEHMKPRPSIYFPEFIAANQAGRADNVL--------SGTK-QEVLDQVRRDIR 151 (448)
Q Consensus 81 i~~~~l~~a~~~a~vl~~~l~~~~~~~l~~~~p~~~i~~~~~~~~~~~~r~~~~~--------~G~~-~~~ie~v~aDI~ 151 (448)
|+++||+|||.||+|||++||+||+|+|++|+|+|+||||+||++||.+|++|++ .|++ ++++|+||+||+
T Consensus 149 I~~~nl~~a~~rA~VL~~~l~~~v~~~l~~i~p~p~i~~~~fia~nq~~ra~nv~~~~~g~~~~g~~~~e~ve~ir~DIr 228 (533)
T 1p1j_A 149 INNADLYEAMQRSQVLEYDLQQRLKAKMSLVKPLPSIYYPDFIAANQDERANNCINLDEKGNVTTRGKWTHLQRIRRDIQ 228 (533)
T ss_dssp SSCCCHHHHHHHHTCSCHHHHHHHHHHHTTCCCBCBCCCGGGSCGGGGGGCCCBSCBCTTSCBCSCCHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHcCCCCHHHHHHHHHHHHhCCcCccccChhHHhhhccccCCceeecccccCCCCCcHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999 6776 899999999999
Q ss_pred hhhhcCCCCceEEEecCccccccccccCCCccccccccccccccccccccchhhhhhhccccccchhhhhhhhhHHHHHH
Q psy9027 152 DFKQKNSLDQVIVLWTANTERFSDIVQGLNDTAENLLEGVAVNNICRGFYDQVIVLWTANTERFSDIVQGLNDTAENLLE 231 (448)
Q Consensus 152 ~fK~~~~L~~aIv~~~n~Te~~~~~vp~~~v~~~~~ldgv~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~l~~t~~~ll~ 231 (448)
+||.+++||++||+|++|||||++ +.+++|+|.++|++
T Consensus 229 ~Fk~~~~ldrvVVlwtAsTE~~~~------------------------------------------~~~g~~~t~~~l~~ 266 (533)
T 1p1j_A 229 NFKEENALDKVIVLWTANTERYVE------------------------------------------VSPGVNDTMENLLQ 266 (533)
T ss_dssp HHHHHTTCSCEEEEECSCCCCCCC------------------------------------------CCTTTTSSHHHHHH
T ss_pred HHHHHcCCCeEEEEeCcCccCCCC------------------------------------------CccccccCHHHHHH
Confidence 999999999999999999999998 45778999999999
Q ss_pred HhhcCCCccChhHHHHHHHHHcCCCCCcc---------hHHHHHHcCCceecCCCCCCcchhhHHHHHHHHHcCCceeEE
Q psy9027 232 SIQKNAAEVSPSTIFAVASILEGNTFVPG---------AIDLAEKKKVFIAGDDFKSGQTKVKSVLVDFLVTAGIKPVSI 302 (448)
Q Consensus 232 ~L~~g~~ei~aS~~YA~AAl~aG~afVna---------~~elae~~gvpi~GDD~KSGqT~lksvLa~~l~~RGlkv~~~ 302 (448)
+|..++++||||++||+|||+|||+|||| |+|+|+++|+||+|||||||||++||+|++||++||++|++|
T Consensus 267 ai~~~~~eispS~~YA~AAl~aG~~fIN~sP~~t~~P~~~elae~~gvpI~GDD~KSGqT~lksvLa~~l~~RGlkv~~~ 346 (533)
T 1p1j_A 267 SIKNDHEEIAPSTIFAAASILEGVPYINGSPQNTFVPGLVQLAEHEGTFIAGDDLKSGQTKLKSVLAQFLVDAGIKPVSI 346 (533)
T ss_dssp HHHTTCTTCCHHHHHHHHHHHTTCCEEECSCSCCCCHHHHHHHHHHTCCEEESSBCCSHHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHhcCCccCChHHHHHHHHHhcCCceeecCCcccCCHHHHHHHHHhCCceeccccccCCchhHHHHHHHHHHcCCceeEE
Confidence 99999999999999999999999887775 999999999999999999999999999999999999999999
Q ss_pred EeeeecCCcccccCCccchhhhhhhhhhhhHHHhhhcccccCCC--CCCCCceeeecccCCCCCceEEEEEEEeeecCCC
Q psy9027 303 VSYNHLGNNDGYNLSAPQQFRSKEISKSNVVDDMVASNSILYRP--GEKPDHTVVIKYVPYVGDSKRALDEYTSEILLGG 380 (448)
Q Consensus 303 ~q~NilGN~Df~NL~~p~r~~SK~iSKs~vv~~il~~~~~Ly~~--g~~~~h~v~idYvP~lGD~K~A~d~ie~~~FlG~ 380 (448)
|||||||||||+||++|+||+|||+||+++|++|++++++||++ |++++|+++||||||+||+|+|||+|++++|||+
T Consensus 347 ~s~N~lGN~Dg~NL~~p~~f~SKeiSKs~vV~dil~~~~~ly~~~~G~~~dh~V~IdYVP~lGD~K~A~d~~~~~~F~G~ 426 (533)
T 1p1j_A 347 ASYNHLGNNDGYNLSAPKQFRSKEISKSSVIDDIIASNDILYNDKLGKKVDHCIVIKYMKPVGDSKVAMDEYYSELMLGG 426 (533)
T ss_dssp EEEEEECSHHHHHHTSHHHHHHHHHHHHHTTHHHHHTCTTTSBTTTBCCCEEEEEEEECGGGTTEEEEEEEEEEECGGGC
T ss_pred EEEEeccCcchhhhCCHhhhhhhhhHHHHHHHHHHhccccccccccCCCCCCceEEeecCCCCCcEEEEEEEEEeeecCC
Confidence 99999999999999999999999999999999999999999987 7789999999999999999999999999999999
Q ss_pred eeEEEEEeeecCcccchhHHHHHHHHHHHhhhhcccCC-----CccccccccchhHHHhhhhcCCCCCCCCCC
Q psy9027 381 HNTISMHNTCEDSLLASPLILDLIILAELSSRIQFTSP-----TVAEYTYFHPVLSILSYLCKAPLVPPETSI 448 (448)
Q Consensus 381 ~~~i~~~l~~~DS~lAAplvIDliRl~~lA~r~~~~g~-----~~~~~~~~g~v~~~lsy~~K~P~~~~~~~~ 448 (448)
||+|+++|+|+||+||||||||||||+|||+|+|++|. +..+|+++++|+++||||||+||+|+++++
T Consensus 427 ~~~I~i~~~c~DS~lAApliIDLvrla~la~r~g~~g~~~~~~~~~~~~~~~~v~s~lSy~fKsP~~~~g~~~ 499 (533)
T 1p1j_A 427 HNRISIHNVCEDSLLATPLIIDLLVMTEFCTRVSYKKVDPVKEDAGKFENFYPVLTFLSYWLKAPLTRPGFHP 499 (533)
T ss_dssp EEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHTEEEEECBTTBTTCSCCBCCCSBCGGGGGGBSSCCCCTTCCC
T ss_pred cEEEEEEEEEecchhhHHHHHHHHHHHHHHHhcCcCCcccccccccccccccchHHHHHHHccCCCCCCCCcc
Confidence 99999999999999999999999999999999999874 567999999999999999999999998864
No 3
>3qvs_A MIPS, MYO-inositol-1-phosphate synthase (INO1); NAD binding rossmann fold, L-MYO-inositol 1-phosphate syntha isomerase; HET: NAD PG4; 1.70A {Archaeoglobus fulgidus} PDB: 1u1i_A* 3qvt_A* 3qvw_A* 3qvx_A* 3qw2_A*
Probab=100.00 E-value=4e-119 Score=916.01 Aligned_cols=353 Identities=24% Similarity=0.300 Sum_probs=332.0
Q ss_pred CcccCCCchHHHHHHHHHHHhcCCCccccCCCCCCCCcccccccceeeecccCCCccccccCcCCCCCCCCCCeeEeeee
Q psy9027 1 MLIGWGGNNGSTVTGAILANKHNLCWQSKDGLKKPNWYGSITQSSTVRLGMDSSGKDVYVPMNSLLPMVDPDDIVLDGWD 80 (448)
Q Consensus 1 ~lvG~gg~~~tt~~ag~~a~k~~l~~~~~~g~~~~~~~Gs~tq~~~~~~g~~~~~~~~~~p~~~~~p~~~~~d~v~ggwD 80 (448)
||||||||||||++||++|||+|++|+| |++||. |..++|||++|+||||||||
T Consensus 4 ~lvG~gG~vaTT~~aG~~A~k~gl~~~~----------G~~~~~----------------~~~~~lpl~~~~Dlv~GGwD 57 (392)
T 3qvs_A 4 WLVGAYGIVSTTAMVGARAIERGIAPKI----------GLVSEL----------------PHFEGIEKYAPFSFEFGGHE 57 (392)
T ss_dssp EEETTTSHHHHHHHHHHHHHHTTCSCCT----------TCGGGS----------------GGGTTGGGTSCSCCEEEEEE
T ss_pred EEecCCccHHHHHHHHHHHHHcCCCCcc----------cccccC----------------cccccCCCCChhhEEEeeee
Confidence 7999999999999999999999999966 888884 44459999999999999999
Q ss_pred CCC-CCHHHHHH----HCCCCChhHHhhhhhhhhcccccCccCChHHHhhhhccCCCCCC---CCChHHHHHHHHHHHHh
Q psy9027 81 ISS-VNLADAME----RSKVLDFNLQIQLRPYMEHMKPRPSIYFPEFIAANQAGRADNVL---SGTKQEVLDQVRRDIRD 152 (448)
Q Consensus 81 i~~-~~l~~a~~----~a~vl~~~l~~~~~~~l~~~~p~~~i~~~~~~~~~~~~r~~~~~---~G~~~~~ie~v~aDI~~ 152 (448)
|++ +||||||+ ||+|||++||+||+|+|++++|+|++|+|.|++. |..|++|++ ++++++++|++|+||++
T Consensus 58 I~~~~~l~~aa~~~~~~a~Vl~~~l~~~v~~~L~~i~p~~~~~~~~~~~~-~~~~~~~~l~~~~~t~~e~ve~ir~DIr~ 136 (392)
T 3qvs_A 58 IRLLSNAYEAAKEHWELNRHFDREILEAVKSDLEGIVARKGTALNCGSGI-KELGDIKTLEGEGLSLAEMVSRIEEDIKS 136 (392)
T ss_dssp SSCCSCHHHHHHHHHHHHCCSCHHHHHHTHHHHHTCCCEECCCTTCCGGG-GGGCSCCCSGGGTCCHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHhCCccccccccchhhh-hcccccccccCCCCCHHHHHHHHHHHHHH
Confidence 999 89999998 8999999999999999999999999999988776 889999996 35899999999999999
Q ss_pred hhhcCCCCceEEEecCccccccccccCCCccccccccccccccccccccchhhhhhhccccccchhhhhhhhhHHHHHHH
Q psy9027 153 FKQKNSLDQVIVLWTANTERFSDIVQGLNDTAENLLEGVAVNNICRGFYDQVIVLWTANTERFSDIVQGLNDTAENLLES 232 (448)
Q Consensus 153 fK~~~~L~~aIv~~~n~Te~~~~~vp~~~v~~~~~ldgv~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~l~~t~~~ll~~ 232 (448)
||. +++||+|++|||+|++ +.+++|+|.++|+++
T Consensus 137 Fk~----d~vVVlw~asTE~~~~------------------------------------------~~~~~~~t~~~l~~a 170 (392)
T 3qvs_A 137 FAD----DETVVINVASTEPLPN------------------------------------------YSEEYHGSLEGFERM 170 (392)
T ss_dssp HCC----TTEEEEECSCCCCCCC------------------------------------------CCHHHHSSHHHHHHH
T ss_pred hhc----CCEEEEECCCCCCCCC------------------------------------------CCcccccCHHHHHHH
Confidence 999 9999999999999998 457889999999999
Q ss_pred hhcCCCcc-ChhHHHHHHHHHcCCCCCcc----------hHHHHHHcCCceecCCCCCCcchhhHHHHHHHHHcCCceeE
Q psy9027 233 IQKNAAEV-SPSTIFAVASILEGNTFVPG----------AIDLAEKKKVFIAGDDFKSGQTKVKSVLVDFLVTAGIKPVS 301 (448)
Q Consensus 233 L~~g~~ei-~aS~~YA~AAl~aG~afVna----------~~elae~~gvpi~GDD~KSGqT~lksvLa~~l~~RGlkv~~ 301 (448)
|..|+++| |||++||+|||+|||+|||| |+++|+++|+||+|||||||||++||+|++||++||++|++
T Consensus 171 i~~~~~ei~spS~~YA~AAl~ag~~fvN~~P~~~a~~P~~~ela~~~g~pi~GdD~KsGqT~~ks~La~~l~~Rglkv~~ 250 (392)
T 3qvs_A 171 IDEDRKEYASASMLYAYAALKLGLPYANFTPSPGSAIPALKELAEKKGVPHAGNDGKTGETLVKTTLAPMFAYRNMEVVG 250 (392)
T ss_dssp HHTTCGGGCCHHHHHHHHHHHTTCCEEECSSSCTTCSHHHHHHHHHHTCEEECSSBCCSHHHHHHHHHHHHHHTTCEEEE
T ss_pred HhcCCccccChHHHHHHHHHHcCCCeeecCCccccCCHHHHHHHHHcCCCEecCcccCCCchHHHHHHHHHHHcCCceeE
Confidence 99999999 99999999999999888776 99999999999999999999999999999999999999999
Q ss_pred EEeeeecCCcccccCCccchhhhhhhhhhhhHHHhhhcccccCCCCCCCCceeeecccCCCCCceEEEEEEEeeecCCCe
Q psy9027 302 IVSYNHLGNNDGYNLSAPQQFRSKEISKSNVVDDMVASNSILYRPGEKPDHTVVIKYVPYVGDSKRALDEYTSEILLGGH 381 (448)
Q Consensus 302 ~~q~NilGN~Df~NL~~p~r~~SK~iSKs~vv~~il~~~~~Ly~~g~~~~h~v~idYvP~lGD~K~A~d~ie~~~FlG~~ 381 (448)
||||||||||||+||++|+||+|||+||+++|++|++ ++++|+++|+||||+||+|+|||+|++++|||+|
T Consensus 251 ~~q~N~lGN~Dg~nL~~~~~~~SK~iSKs~vv~~~lg---------~~~~~~v~I~Yvp~lGD~K~a~d~i~~~~F~G~~ 321 (392)
T 3qvs_A 251 WMSYNILGDYDGKVLSARDNKESKVLSKDKVLEKMLG---------YSPYSITEIQYFPSLVDNKTAFDFVHFKGFLGKL 321 (392)
T ss_dssp EEEEEEECHHHHHHTTSHHHHHHHHHHHHTHHHHHHS---------SCCEEEEEEEECGGGTTCCEEEEEEEEECGGGCE
T ss_pred EEEEeccccchhhhhCCHhHhhhhhhHHHHHHHHHhC---------CCCCCceEEeecCCCCCceEEEEEEEeeeeCCCc
Confidence 9999999999999999999999999999999999995 4578999999999999999999999999999999
Q ss_pred eEEEEEeeecCcccchhHHHHHHHHHHHhhhhcccCCCccccccccchhHHHhhhhcCCCCCCCC
Q psy9027 382 NTISMHNTCEDSLLASPLILDLIILAELSSRIQFTSPTVAEYTYFHPVLSILSYLCKAPLVPPET 446 (448)
Q Consensus 382 ~~i~~~l~~~DS~lAAplvIDliRl~~lA~r~~~~g~~~~~~~~~g~v~~~lsy~~K~P~~~~~~ 446 (448)
|+|+++|+|+||+||||||||||||+|+|+|+|+ +++++.+|||||+||+|+..
T Consensus 322 ~~i~~~~~~~DS~laAplviDlvrl~~la~~~g~-----------~G~l~~ls~~~K~P~~~~~~ 375 (392)
T 3qvs_A 322 MKFYFIWDAIDAIVAAPLILDIARFLLFAKKKGV-----------KGVVKEMAFFFKSPMDTNVI 375 (392)
T ss_dssp EEEEEEEECCHHHHHHHHHHHHHHHHHHHHHTTC-----------CEECGGGGGGBSSCTTCCCC
T ss_pred EEEEEEEEEecchhhHHHHHHHHHHHHHHHhcCC-----------CCchHHHHHHhcCCCCCCCC
Confidence 9999999999999999999999999999999665 34666668999999998753
No 4
>3cin_A MYO-inositol-1-phosphate synthase-related protein; structura genomics, joint center for structural genomics, JCSG; HET: NAD; 1.70A {Thermotoga maritima MSB8}
Probab=100.00 E-value=4.6e-93 Score=728.36 Aligned_cols=340 Identities=22% Similarity=0.330 Sum_probs=285.1
Q ss_pred CcccCCCchHHHHHHHHHHHhcCCCccccCCCCCCCCcccccccceeeecccCCCccccccCcCCCCCCCCCCeeEeeee
Q psy9027 1 MLIGWGGNNGSTVTGAILANKHNLCWQSKDGLKKPNWYGSITQSSTVRLGMDSSGKDVYVPMNSLLPMVDPDDIVLDGWD 80 (448)
Q Consensus 1 ~lvG~gg~~~tt~~ag~~a~k~~l~~~~~~g~~~~~~~Gs~tq~~~~~~g~~~~~~~~~~p~~~~~p~~~~~d~v~ggwD 80 (448)
||||+ ||||||+++|++++|+|+. + ++| +|+.+.+|+..+|++||||||
T Consensus 17 aIvGv-GnvASTlvqGv~~~r~g~~--------~--~~G--------------------~p~~~~~p~~~~Di~vvgg~D 65 (394)
T 3cin_A 17 LILGQ-GYVASTFVAGLEKLRKGEI--------E--PYG--------------------VPLARELPIGFEDIKIVGSYD 65 (394)
T ss_dssp EEECC-SHHHHHHHHHHHHHHTTSS--------C--CTT--------------------CTTTTCSSSCGGGEEEEEEEE
T ss_pred EEecC-CHHHHHHHHHHHHHHcCCC--------C--Ccc--------------------ccccccCCCCCCCcEEEEEec
Confidence 58998 6999999999999999982 2 234 688889999989999999999
Q ss_pred CCCCCHHHHHHHCCCCChhHHhhhhhhhhcccccCccCChHHHhhhhccCCCCCC-CCChHHHHHHHHHHHHhh-hhcCC
Q psy9027 81 ISSVNLADAMERSKVLDFNLQIQLRPYMEHMKPRPSIYFPEFIAANQAGRADNVL-SGTKQEVLDQVRRDIRDF-KQKNS 158 (448)
Q Consensus 81 i~~~~l~~a~~~a~vl~~~l~~~~~~~l~~~~p~~~i~~~~~~~~~~~~r~~~~~-~G~~~~~ie~v~aDI~~f-K~~~~ 158 (448)
|+..++++.+.+| +.+-...++.+.+. |++....+..+..+.. .+...++.+.++++|++| |+.++
T Consensus 66 Id~~kvgk~l~eA-------i~~~~n~~~~~~~~-----p~~~~~v~~~~~~~~~~~~~~~~~~~~~~e~i~~~~k~~~~ 133 (394)
T 3cin_A 66 VDRAKIGKKLSEV-------VKQYWNDVDSLTSD-----PEIRKGVHLGSVRNLPIEAEGLEDSMTLKEAVDTLVKEWTE 133 (394)
T ss_dssp CBTTTTTSBHHHH-------HHHHCTTCCCCSSC-----CBCEECCCTTTTTTSSCCBCCGGGSSCHHHHHHHHHHHHHH
T ss_pred CCcchhHHHHHHH-------HhhchhccccccCc-----cccccCcccccccCcCccccchhhhhhHHHhHHHHHHHhhh
Confidence 9998876555443 11122223333332 3333444545554443 233444555566666665 55577
Q ss_pred CCceEEEecCccccccccccCCCccccccccccccccccccccchhhhhhhccccccchhhhhhhhhHHHHHHHhhcCCC
Q psy9027 159 LDQVIVLWTANTERFSDIVQGLNDTAENLLEGVAVNNICRGFYDQVIVLWTANTERFSDIVQGLNDTAENLLESIQKNAA 238 (448)
Q Consensus 159 L~~aIv~~~n~Te~~~~~vp~~~v~~~~~ldgv~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~l~~t~~~ll~~L~~g~~ 238 (448)
++++|++|+++||+|.+. .|.+++++++..++.
T Consensus 134 ~~~~Vvvn~asTE~ylpv-----------------------------------------------gs~~~~~~a~~~~~~ 166 (394)
T 3cin_A 134 LDPDVIVNTCTTEAFVPF-----------------------------------------------GNKEDLLKAIENNDK 166 (394)
T ss_dssp HCCSEEEECCCCCCCCCC-----------------------------------------------SSHHHHHHHHHTTCT
T ss_pred ccceeEeeecccccCCCC-----------------------------------------------CCHHHHHHHhhcccc
Confidence 889999999999999871 466788888887765
Q ss_pred c-cChhHHHHHHHH-----HcCCCCCcc----------hHHHHHHcCCceecCCCCCCcchhhHHHHHHHHHcCCceeEE
Q psy9027 239 E-VSPSTIFAVASI-----LEGNTFVPG----------AIDLAEKKKVFIAGDDFKSGQTKVKSVLVDFLVTAGIKPVSI 302 (448)
Q Consensus 239 e-i~aS~~YA~AAl-----~aG~afVna----------~~elae~~gvpi~GDD~KSGqT~lksvLa~~l~~RGlkv~~~ 302 (448)
+ |+||++||+||+ ++||+|||| |.|+|+++|+||+|||+|||||++||+|++||++||++|++|
T Consensus 167 ~~i~as~~YA~AAl~~aa~~aG~~fvN~~P~~ia~~P~~~ela~~~gvpi~GdD~ktG~T~~k~~L~~~l~~rgl~v~~~ 246 (394)
T 3cin_A 167 ERLTATQVYAYAAALYANKRGGAAFVNVIPTFIANDPAFVELAKENNLVVFGDDGATGATPFTADVLSHLAQRNRYVKDV 246 (394)
T ss_dssp TTCCHHHHHHHHHHHHHHHHTCEEEEECSSSCSTTCHHHHHHHHHTTEEEECSSBSCSHHHHHHHHHHHHHHTTCEEEEE
T ss_pred ccCChhHHHHHHHHHhhhhhcCCceecCCCccccCcHHHHHHHHHcCCcEecccccccchhHHHHHHHHHHHCCCeEeEE
Confidence 5 999999999999 799988876 999999999999999999999999999999999999999999
Q ss_pred EeeeecCCcccccCCccchhhhhhhhhhhhHHHhhhcccccCCCCCCCCceeeecccCCCCCceEEEEEEEeeecCCCee
Q psy9027 303 VSYNHLGNNDGYNLSAPQQFRSKEISKSNVVDDMVASNSILYRPGEKPDHTVVIKYVPYVGDSKRALDEYTSEILLGGHN 382 (448)
Q Consensus 303 ~q~NilGN~Df~NL~~p~r~~SK~iSKs~vv~~il~~~~~Ly~~g~~~~h~v~idYvP~lGD~K~A~d~ie~~~FlG~~~ 382 (448)
||+||||||||+||++|+||+|||+||+++|++|+++ +.++|++||+|||||||+|+|||+||+++|||+||
T Consensus 247 ~q~N~lGN~Dg~nl~~~~~~~sK~~SK~~vv~~~l~~--------~~~~h~~~~~Yvp~lgD~K~a~~~ie~~~f~g~~~ 318 (394)
T 3cin_A 247 AQFNIGGNMDFLALTDDGKNKSKEFTKSSIVKDILGY--------DAPHYIKPTGYLEPLGDKKFIAIHIEYVSFNGATD 318 (394)
T ss_dssp EEEEEECCGGGGSSCHHHHHHHHHHHSCCHHHHHHSS--------CCCEECCCCEECGGGTTEEEEEEEEEEECGGGCEE
T ss_pred EEEeecccchhhHhCCHhhhhhHHHHHHHHHHHHhhc--------cccccccccCCCCcCCCCeEEEEEEEEEEecCcce
Confidence 9999999999999999999999999999999999974 25889999999999999999999999999999999
Q ss_pred EEEEEeeecCcccchhHHHHHHHHHHHhhhhcccCCCccccccccchhHHHhhhhcCCCCCCCCCC
Q psy9027 383 TISMHNTCEDSLLASPLILDLIILAELSSRIQFTSPTVAEYTYFHPVLSILSYLCKAPLVPPETSI 448 (448)
Q Consensus 383 ~i~~~l~~~DS~lAAplvIDliRl~~lA~r~~~~g~~~~~~~~~g~v~~~lsy~~K~P~~~~~~~~ 448 (448)
+|+++|+|+|||||||||||||||+|+|+| +|+ +|+++++||||||+|+++.+.++
T Consensus 319 ~i~~~~~~~DS~laAplviDlir~~~la~~---~g~-------~g~v~~~~s~~~K~P~~~~~~~~ 374 (394)
T 3cin_A 319 ELMINGRINDSPALGGLLVDLVRLGKIALD---RKE-------FGTVYPVNAFYMKNPGPAEEKNI 374 (394)
T ss_dssp EEEEEEEEEHHHHHHHHHHHHHHHHHHHHH---TTC-------CEECHHHHHHHBSSCSSTTCCCC
T ss_pred EEEEEeEEechhhhHHHHHHHHHHHHHHHH---hcC-------CCcchhHHHHHcCCCCCCCCCcH
Confidence 999999999999999999999999999999 444 78999999999999998877653
No 5
>1gr0_A Inositol-3-phosphate synthase; isomerase, oxidoreductase, PSI, protein structure initiative, TB structural genomics consortium, TB; HET: NAD; 1.95A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3
Probab=100.00 E-value=1.7e-93 Score=722.84 Aligned_cols=319 Identities=19% Similarity=0.193 Sum_probs=265.6
Q ss_pred cccCCCchHHHHHHHHHHHhcCCCccccCCCCCCCCcccccccceeeecccCCCccccccCcCCCCCCCCCCe-eEeeee
Q psy9027 2 LIGWGGNNGSTVTGAILANKHNLCWQSKDGLKKPNWYGSITQSSTVRLGMDSSGKDVYVPMNSLLPMVDPDDI-VLDGWD 80 (448)
Q Consensus 2 lvG~gg~~~tt~~ag~~a~k~~l~~~~~~g~~~~~~~Gs~tq~~~~~~g~~~~~~~~~~p~~~~~p~~~~~d~-v~ggwD 80 (448)
|||| ||+|||+++|++|+|+|++|+++.|+... ++. +++|+|+ +++|||
T Consensus 20 IVGv-GN~GsaLv~Gi~~yk~~~~~~~~~Gl~~~----------------------------~~g-~~~~~Di~iVaafD 69 (367)
T 1gr0_A 20 IVGV-GNCASSLVQGVEYYYNADDTSTVPGLMHV----------------------------RFG-PYHVRDVKFVAAFD 69 (367)
T ss_dssp EECC-SHHHHHHHHHHHHTTTCCTTSCCTTCSCS----------------------------EET-TEEGGGEEEEEEEE
T ss_pred EECc-ChHHHHHHHHHHHHhccCcccccCCcccc----------------------------ccC-CccCCCeEEEEEEc
Confidence 6999 69999999999999999999998876652 222 4588999 499999
Q ss_pred CCCCCHHHHHHHCCCCChhHHhhhhhhhh--cccccCccCChHHHhhhhccCCCCCCCCChHHHHHHHHHHHHhhhhcCC
Q psy9027 81 ISSVNLADAMERSKVLDFNLQIQLRPYME--HMKPRPSIYFPEFIAANQAGRADNVLSGTKQEVLDQVRRDIRDFKQKNS 158 (448)
Q Consensus 81 i~~~~l~~a~~~a~vl~~~l~~~~~~~l~--~~~p~~~i~~~~~~~~~~~~r~~~~~~G~~~~~ie~v~aDI~~fK~~~~ 158 (448)
|++.++.++|.+|.|++++++.+++ +|. .++|+||+| ++|++.+|. |++.++. .+++||++||..++
T Consensus 70 Id~~KVG~~l~~A~~~~~n~~~~~~-~v~~~~v~v~~g~~-ldgia~~~~----~~i~~s~-----~~~~Di~~~~~~~~ 138 (367)
T 1gr0_A 70 VDAKKVGFDLSDAIFASENNTIKIA-DVAPTNVIVQRGPT-LDGIGKYYA----DTIELSD-----AEPVDVVQALKEAK 138 (367)
T ss_dssp CBTTTTTSBHHHHTTSTTCCCCCCS-CCCCCCCBCEECCC-TTSCCHHHH----TTSCBCS-----SCCCCHHHHHHHTT
T ss_pred CChHHHHHHhhCCEecCCCchhhhh-cccccCceEccCCC-CCchhhhhh----hcccccc-----chhhHHHHHHHHhC
Confidence 9999999999999999999999999 998 899999999 999999994 4665543 25669999999999
Q ss_pred CCceEEEecCccccccccccCCCccccccccccccccccccccchhhhhhhccccccchhhhhhhhhHHHHHHHhhcCCC
Q psy9027 159 LDQVIVLWTANTERFSDIVQGLNDTAENLLEGVAVNNICRGFYDQVIVLWTANTERFSDIVQGLNDTAENLLESIQKNAA 238 (448)
Q Consensus 159 L~~aIv~~~n~Te~~~~~vp~~~v~~~~~ldgv~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~l~~t~~~ll~~L~~g~~ 238 (448)
+| +|+.| . |+|+.
T Consensus 139 ~d-VvV~~-------l-----------------------------------------------------------p~gs~ 151 (367)
T 1gr0_A 139 VD-VLVSY-------L-----------------------------------------------------------PVGSE 151 (367)
T ss_dssp CS-EEEEC-------C-----------------------------------------------------------CTTCH
T ss_pred Cc-EEEEe-------e-----------------------------------------------------------eCCCc
Confidence 99 66654 1 23444
Q ss_pred ccChhHHHHHHHHHcCCCCCcc----------hHHHHHHcCCceecCCCC--CCcchhhHHHHHHHHHcCCceeEEEeee
Q psy9027 239 EVSPSTIFAVASILEGNTFVPG----------AIDLAEKKKVFIAGDDFK--SGQTKVKSVLVDFLVTAGIKPVSIVSYN 306 (448)
Q Consensus 239 ei~aS~~YA~AAl~aG~afVna----------~~elae~~gvpi~GDD~K--SGqT~lksvLa~~l~~RGlkv~~~~q~N 306 (448)
+ ||++||+|||++||+|||| |.|+|+++|+||+||||| ||||++||+|++||++||++|++|||+|
T Consensus 152 ~--aS~~YA~Aal~ag~~fvN~~P~~~~~~P~~~el~~~~g~pi~GdD~Ksq~G~T~~k~~La~~l~~rg~kv~~~~q~N 229 (367)
T 1gr0_A 152 E--ADKFYAQCAIDAGVAFVNALPVFIASDPVWAKKFTDARVPIVGDDIKSQVGATITHRVLAKLFEDRGVQLDRTMQLN 229 (367)
T ss_dssp H--HHHHHHHHHHHHTCEEEECSSCCSTTSHHHHHHHHHHTCEEEESSBCCSSCHHHHHHHHHHHHHHTTCEEEEEEEEE
T ss_pred C--HHHHHHHHHHHcCCceEecCCccccCCHHHHHHHHHcCCCEeccccccccCCChHHHHHHHHHHHcCCceeEEEEEe
Confidence 4 9999999999999988886 999999999999999999 7999999999999999999999999999
Q ss_pred ecCCcccccCCccchhhhhhhhhhhhHHHhhhcccccCCCCCCCCceeeecccCCCCCceEEEEEEEeeecCCCeeEEEE
Q psy9027 307 HLGNNDGYNLSAPQQFRSKEISKSNVVDDMVASNSILYRPGEKPDHTVVIKYVPYVGDSKRALDEYTSEILLGGHNTISM 386 (448)
Q Consensus 307 ilGN~Df~NL~~p~r~~SK~iSKs~vv~~il~~~~~Ly~~g~~~~h~v~idYvP~lGD~K~A~d~ie~~~FlG~~~~i~~ 386 (448)
|||||||+||++|+||+|||+||+++|++|+++.+ .++..|++|++|||||||+|+|||+||+++|||+||+|++
T Consensus 230 ~lGN~D~~nL~~~~~~~sK~iSKs~vv~~~l~~~~-----~d~~v~Igps~Yvp~lgD~K~a~d~i~~~~F~G~~~~i~~ 304 (367)
T 1gr0_A 230 VGGNMDFLNMLERERLESKKISKTQAVTSNLKREF-----KTKDVHIGPSDHVGWLDDRKWAYVRLEGRAFGDVPLNLEY 304 (367)
T ss_dssp EECSHHHHHHHC-------------------------------CEECSEEEECGGGTTEEEEEEEEEEEEGGGEEEEEEE
T ss_pred ccCchhhhhhCChhhhhhhhhHHHHHHHHHhccCC-----CCCcEEECccccCCcCCCceEEEEEEEeeecCCCcEEEEE
Confidence 99999999999999999999999999999997521 1345667777999999999999999999999999999999
Q ss_pred EeeecCcccchhHHHHHHHHHHHhhhhcccCCCccccccccchhHHHhhhhcCCCCCCC
Q psy9027 387 HNTCEDSLLASPLILDLIILAELSSRIQFTSPTVAEYTYFHPVLSILSYLCKAPLVPPE 445 (448)
Q Consensus 387 ~l~~~DS~lAAplvIDliRl~~lA~r~~~~g~~~~~~~~~g~v~~~lsy~~K~P~~~~~ 445 (448)
+|+|+||||||||+||||||+|+|+|+|+ +|++.++||||||+||+|++
T Consensus 305 ~~~~~DS~laAplviDlvrl~~la~~~g~----------~G~v~~~ssy~~K~P~~~~~ 353 (367)
T 1gr0_A 305 KLEVWDSPNSAGVIIDAVRAAKIAKDRGI----------GGPVIPASAYLMKSPPEQLP 353 (367)
T ss_dssp EEEEETTHHHHHHHHHHHHHHHHHHHTTC----------CEECHHHHHHHBSSCSSCCC
T ss_pred EEEEecchhhHHHHHHHHHHHHHHHhcCC----------CcchhHHHHHHccCCCCCCC
Confidence 99999999999999999999999999766 56899999999999999986
No 6
>1vjp_A MYO-inositol-1-phosphate synthase-related protein; TM1419, structural genomics, JCSG, PSI, protein structure initiative; HET: NAD; 1.70A {Thermotoga maritima} PDB: 3cin_A*
Probab=100.00 E-value=1.8e-85 Score=666.84 Aligned_cols=334 Identities=21% Similarity=0.340 Sum_probs=286.1
Q ss_pred CcccCCCchHHHHHHHHHHHhcCCCccccCCCCCCCCcccccccceeeecccCCCccccccCcCCCCCCCCCCee-Eeee
Q psy9027 1 MLIGWGGNNGSTVTGAILANKHNLCWQSKDGLKKPNWYGSITQSSTVRLGMDSSGKDVYVPMNSLLPMVDPDDIV-LDGW 79 (448)
Q Consensus 1 ~lvG~gg~~~tt~~ag~~a~k~~l~~~~~~g~~~~~~~Gs~tq~~~~~~g~~~~~~~~~~p~~~~~p~~~~~d~v-~ggw 79 (448)
+++|.| |+||+++.|++..|+|.. + ++| +|..++.|. .|.||. +++|
T Consensus 17 ~~~GvG-n~ASslvqGie~yk~~~~--------~--~~G--------------------l~~~~~~~y-~~~Dievvaaf 64 (394)
T 1vjp_A 17 LILGQG-YVASTFVAGLEKLRKGEI--------E--PYG--------------------VPLARELPI-GFEDIKIVGSY 64 (394)
T ss_dssp EEECCS-HHHHHHHHHHHHHHTTSS--------C--CTT--------------------CTTTTCSSS-CGGGEEEEEEE
T ss_pred EEEEeh-HHHHHHHHHHHHHHcCCC--------C--Ccc--------------------ccchhccCC-CcCceEEEEEE
Confidence 468886 999999999999999941 1 235 334455666 788998 9999
Q ss_pred eCCCC----CHHHHHHHCCCCChhHHhhhhhhhhcccccCccCChHHHhhhhccCCCCCCCC-ChHHHHHHHHHHHHhhh
Q psy9027 80 DISSV----NLADAMERSKVLDFNLQIQLRPYMEHMKPRPSIYFPEFIAANQAGRADNVLSG-TKQEVLDQVRRDIRDFK 154 (448)
Q Consensus 80 Di~~~----~l~~a~~~a~vl~~~l~~~~~~~l~~~~p~~~i~~~~~~~~~~~~r~~~~~~G-~~~~~ie~v~aDI~~fK 154 (448)
||++. +|+||..+. ++. +++.|..++.++|....-.-... ....+.+.. +..+.++.|+++++++|
T Consensus 65 DVd~~KVGkdl~eai~~~----pn~---Vp~~l~~V~V~~G~~ldg~~~~~--~~~~~~~e~~s~~e~v~~vv~~lk~~~ 135 (394)
T 1vjp_A 65 DVDRAKIGKKLSEVVKQY----WND---VDSLTSDPEIRKGVHLGSVRNLP--IEAEGLEDSMTLKEAVDTLVKEWTELD 135 (394)
T ss_dssp ECBTTTTTSBHHHHHHHH----CTT---CCCCSSCCBCEECCCTTTTTTSS--CCBCCGGGSSCHHHHHHHHHHHHHHHC
T ss_pred eccccccCCcHHHHHhhC----cCC---CCcccCCCEEEeccccCcccccc--hhhhccccccchhhHHHHHHHHHHHcC
Confidence 99998 689998773 111 77888999999998654211000 001111222 24778888889998888
Q ss_pred hcCCCCceEEEecCccccccccccCCCccccccccccccccccccccchhhhhhhccccccchhhhhhhhhHHHHHHHhh
Q psy9027 155 QKNSLDQVIVLWTANTERFSDIVQGLNDTAENLLEGVAVNNICRGFYDQVIVLWTANTERFSDIVQGLNDTAENLLESIQ 234 (448)
Q Consensus 155 ~~~~L~~aIv~~~n~Te~~~~~vp~~~v~~~~~ldgv~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~l~~t~~~ll~~L~ 234 (448)
. .|++|..|||+|++. .|.++|++++.
T Consensus 136 ~------DVvIn~~STE~~~p~-----------------------------------------------gs~~~l~~ai~ 162 (394)
T 1vjp_A 136 P------DVIVNTCTTEAFVPF-----------------------------------------------GNKEDLLKAIE 162 (394)
T ss_dssp C------SEEEECCCCCCCCCC-----------------------------------------------SSHHHHHHHHH
T ss_pred C------CEEEEecCccCCCCC-----------------------------------------------CCHHHHHHHHh
Confidence 7 389999999999981 58999999999
Q ss_pred cCC-CccChhHHHHHHHHH-----cCCCCCcc----------hHHHHHHcCCceecCCCCCCcchhhHHHHHHHHHcCCc
Q psy9027 235 KNA-AEVSPSTIFAVASIL-----EGNTFVPG----------AIDLAEKKKVFIAGDDFKSGQTKVKSVLVDFLVTAGIK 298 (448)
Q Consensus 235 ~g~-~ei~aS~~YA~AAl~-----aG~afVna----------~~elae~~gvpi~GDD~KSGqT~lksvLa~~l~~RGlk 298 (448)
.++ ++||||++||+||++ +||+|||| |+++|+++|+||+|||+|||||++||+|++||++||++
T Consensus 163 ~~~~~~i~aS~~YA~AAl~~~~~~aG~~fVN~~P~~ia~~P~~~ela~~~gvpi~GDD~ktGqT~lks~La~~l~~Rglk 242 (394)
T 1vjp_A 163 NNDKERLTATQVYAYAAALYANKRGGAAFVNVIPTFIANDPAFVELAKENNLVVFGDDGATGATPFTADVLSHLAQRNRY 242 (394)
T ss_dssp TTCTTTCCHHHHHHHHHHHHHHHHTCEEEEECSSSCSTTCHHHHHHHHHTTEEEECSSBSCSHHHHHHHHHHHHHHTTCE
T ss_pred cCCCCccChHHHHHHHHHhhccccCCcceEecCCccccCCHHHHHHHHHcCCCEEccccCCCCCchHHHHHHHHHHcCCc
Confidence 998 579999999999999 99877765 99999999999999999999999999999999999999
Q ss_pred eeEEEeeeecCCcccccCCccchhhhhhhhhhhhHHHhhhcccccCCCCCCCCceeeecccCCCCCceEEEEEEEeeecC
Q psy9027 299 PVSIVSYNHLGNNDGYNLSAPQQFRSKEISKSNVVDDMVASNSILYRPGEKPDHTVVIKYVPYVGDSKRALDEYTSEILL 378 (448)
Q Consensus 299 v~~~~q~NilGN~Df~NL~~p~r~~SK~iSKs~vv~~il~~~~~Ly~~g~~~~h~v~idYvP~lGD~K~A~d~ie~~~Fl 378 (448)
|++|||+||||||||+||++|+||+|||+||+++|++|++++ .++|++||+|||||||+|+|||+|++++||
T Consensus 243 v~~~~q~NilGN~Dg~nL~~p~~~~SKeiSKs~vv~d~l~~~--------~~~hi~~i~Yvp~lGD~K~A~d~ie~~~Fl 314 (394)
T 1vjp_A 243 VKDVAQFNIGGNMDFLALTDDGKNKSKEFTKSSIVKDILGYD--------APHYIKPTGYLEPLGDKKFIAIHIEYVSFN 314 (394)
T ss_dssp EEEEEEEEEECCGGGGSSCHHHHHHHHHHHSCCHHHHHHSSC--------CCEECCCCEECGGGTTEEEEEEEEEEECGG
T ss_pred eeEEEEEeccccchhhhhCCHhHhhhhhhHHHHHHHHHhcCC--------CCccccccccCCcCCCceEEEEEEEeeecC
Confidence 999999999999999999999999999999999999999854 478999999999999999999999999999
Q ss_pred CCeeEEEEEeeecCcccchhHHHHHHHHHHHhhhhcccCCCccccccccchhHHHhhhhcCC-CCCCCC
Q psy9027 379 GGHNTISMHNTCEDSLLASPLILDLIILAELSSRIQFTSPTVAEYTYFHPVLSILSYLCKAP-LVPPET 446 (448)
Q Consensus 379 G~~~~i~~~l~~~DS~lAAplvIDliRl~~lA~r~~~~g~~~~~~~~~g~v~~~lsy~~K~P-~~~~~~ 446 (448)
|+||+|+++|+|+||||||||||||+||+|+|+|+|. +|++.++||||||+| |++...
T Consensus 315 G~~~~i~~~~~~~DS~lAAplviDlvrla~la~~~g~----------~G~v~~~~sy~~K~P~P~~~~~ 373 (394)
T 1vjp_A 315 GATDELMINGRINDSPALGGLLVDLVRLGKIALDRKE----------FGTVYPVNAFYMKNPGPAEEKN 373 (394)
T ss_dssp GCEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHTTC----------CEECHHHHHHHBSSCSSTTCCC
T ss_pred CCcEEEEEEEEEecchhhHHHHHHHHHHHHHHHHhcC----------CCcchHHHHHHccCCCCCCCCC
Confidence 9999999999999999999999999999999999544 789999999999999 787653
No 7
>1vjp_A MYO-inositol-1-phosphate synthase-related protein; TM1419, structural genomics, JCSG, PSI, protein structure initiative; HET: NAD; 1.70A {Thermotoga maritima} PDB: 3cin_A*
Probab=98.60 E-value=1.6e-10 Score=118.09 Aligned_cols=140 Identities=12% Similarity=0.086 Sum_probs=103.4
Q ss_pred CCCChHHHHHHHHH-HHHhhhhcCCCCceEEEecCccccccccccC--CCcc--ccccccccc---cccccccccchhhh
Q psy9027 135 LSGTKQEVLDQVRR-DIRDFKQKNSLDQVIVLWTANTERFSDIVQG--LNDT--AENLLEGVA---VNNICRGFYDQVIV 206 (448)
Q Consensus 135 ~~G~~~~~ie~v~a-DI~~fK~~~~L~~aIv~~~n~Te~~~~~vp~--~~v~--~~~~ldgv~---~~~~~~~~~~~~~~ 206 (448)
++||++.|||+|++ |||++|+|++|++|||..||| ||+ .+|+ +|++|||++ .||. +
T Consensus 50 ~~~y~~~DievvaafDVd~~KVGkdl~eai~~~pn~-------Vp~~l~~V~V~~G~~ldg~~~~~~~~~--~------- 113 (394)
T 1vjp_A 50 ELPIGFEDIKIVGSYDVDRAKIGKKLSEVVKQYWND-------VDSLTSDPEIRKGVHLGSVRNLPIEAE--G------- 113 (394)
T ss_dssp CSSSCGGGEEEEEEEECBTTTTTSBHHHHHHHHCTT-------CCCCSSCCBCEECCCTTTTTTSSCCBC--C-------
T ss_pred ccCCCcCceEEEEEEeccccccCCcHHHHHhhCcCC-------CCcccCCCEEEeccccCcccccchhhh--c-------
Confidence 57899999999999 999999999999999999999 566 5664 489999999 8775 2
Q ss_pred hhhc--cccccchhhhhhhhhHHHHH-HHh------hcCCCccChhHHHHHHHHHcCC-CCCcc---hHHHHHH-----c
Q psy9027 207 LWTA--NTERFSDIVQGLNDTAENLL-ESI------QKNAAEVSPSTIFAVASILEGN-TFVPG---AIDLAEK-----K 268 (448)
Q Consensus 207 ~~~~--~~~~~~dv~~~l~~t~~~ll-~~L------~~g~~ei~aS~~YA~AAl~aG~-afVna---~~elae~-----~ 268 (448)
..+. .+++++||++.|++++.|++ +++ |.++.+ .+ ++|++++. .-+++ ...-|-+ +
T Consensus 114 ~~e~~s~~e~v~~vv~~lk~~~~DVvIn~~STE~~~p~gs~~----~l--~~ai~~~~~~~i~aS~~YA~AAl~~~~~~a 187 (394)
T 1vjp_A 114 LEDSMTLKEAVDTLVKEWTELDPDVIVNTCTTEAFVPFGNKE----DL--LKAIENNDKERLTATQVYAYAAALYANKRG 187 (394)
T ss_dssp GGGSSCHHHHHHHHHHHHHHHCCSEEEECCCCCCCCCCSSHH----HH--HHHHHTTCTTTCCHHHHHHHHHHHHHHHHT
T ss_pred cccccchhhHHHHHHHHHHHcCCCEEEEecCccCCCCCCCHH----HH--HHHHhcCCCCccChHHHHHHHHHhhccccC
Confidence 1222 24566689999999999976 888 765443 22 46788775 45665 4455556 8
Q ss_pred CCcee-cCCCCCCcchhhHHHHHHHHHcCCce
Q psy9027 269 KVFIA-GDDFKSGQTKVKSVLVDFLVTAGIKP 299 (448)
Q Consensus 269 gvpi~-GDD~KSGqT~lksvLa~~l~~RGlkv 299 (448)
|+|.+ |-- + -+--.-.++++|.++|+-+
T Consensus 188 G~~fVN~~P--~-~ia~~P~~~ela~~~gvpi 216 (394)
T 1vjp_A 188 GAAFVNVIP--T-FIANDPAFVELAKENNLVV 216 (394)
T ss_dssp CEEEEECSS--S-CSTTCHHHHHHHHHTTEEE
T ss_pred CcceEecCC--c-cccCCHHHHHHHHHcCCCE
Confidence 88865 222 1 0112357999999999865
No 8
>1gr0_A Inositol-3-phosphate synthase; isomerase, oxidoreductase, PSI, protein structure initiative, TB structural genomics consortium, TB; HET: NAD; 1.95A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3
Probab=97.99 E-value=3.1e-08 Score=100.89 Aligned_cols=135 Identities=17% Similarity=0.115 Sum_probs=97.5
Q ss_pred CCCChHHHHHHHHH-HHHhhhhcCCCCceEEEecCccccccccccCCCccc--cccccccccccccccccchhhhhhhcc
Q psy9027 135 LSGTKQEVLDQVRR-DIRDFKQKNSLDQVIVLWTANTERFSDIVQGLNDTA--ENLLEGVAVNNICRGFYDQVIVLWTAN 211 (448)
Q Consensus 135 ~~G~~~~~ie~v~a-DI~~fK~~~~L~~aIv~~~n~Te~~~~~vp~~~v~~--~~~ldgv~~~~~~~~~~~~~~~~~~~~ 211 (448)
++|+++.+++++++ ||+..|+++++++|||+.||||+++++ ||+++|++ |++|||++.||. + .++.+
T Consensus 54 ~g~~~~~Di~iVaafDId~~KVG~~l~~A~~~~~n~~~~~~~-v~~~~v~v~~g~~ldgia~~~~--~-------~i~~s 123 (367)
T 1gr0_A 54 FGPYHVRDVKFVAAFDVDAKKVGFDLSDAIFASENNTIKIAD-VAPTNVIVQRGPTLDGIGKYYA--D-------TIELS 123 (367)
T ss_dssp ETTEEGGGEEEEEEEECBTTTTTSBHHHHTTSTTCCCCCCSC-CCCCCCBCEECCCTTSCCHHHH--T-------TSCBC
T ss_pred cCCccCCCeEEEEEEcCChHHHHHHhhCCEecCCCchhhhhc-ccccCceEccCCCCCchhhhhh--h-------ccccc
Confidence 46789999999999 999999999999999999999999998 99887755 799999998884 1 22334
Q ss_pred ccccchhhhhhhhhHHHHHHHhhcCCCccChhHHHHHHHHHcCCCCCcc---hHHHHHHcCCceecCCCCCCcchh-hHH
Q psy9027 212 TERFSDIVQGLNDTAENLLESIQKNAAEVSPSTIFAVASILEGNTFVPG---AIDLAEKKKVFIAGDDFKSGQTKV-KSV 287 (448)
Q Consensus 212 ~~~~~dv~~~l~~t~~~ll~~L~~g~~ei~aS~~YA~AAl~aG~afVna---~~elae~~gvpi~GDD~KSGqT~l-ksv 287 (448)
++...||.+.++++..|++ .+- ++ .|. .++ ..+-|-+.|+|.+=- +=+.+. .-.
T Consensus 124 ~~~~~Di~~~~~~~~~dVv----V~~--lp-----------~gs--~~aS~~YA~Aal~ag~~fvN~---~P~~~~~~P~ 181 (367)
T 1gr0_A 124 DAEPVDVVQALKEAKVDVL----VSY--LP-----------VGS--EEADKFYAQCAIDAGVAFVNA---LPVFIASDPV 181 (367)
T ss_dssp SSCCCCHHHHHHHTTCSEE----EEC--CC-----------TTC--HHHHHHHHHHHHHHTCEEEEC---SSCCSTTSHH
T ss_pred cchhhHHHHHHHHhCCcEE----EEe--ee-----------CCC--cCHHHHHHHHHHHcCCceEec---CCccccCCHH
Confidence 4555577776666665521 221 22 111 111 556667789987632 344555 468
Q ss_pred HHHHHHHcCCceeE
Q psy9027 288 LVDFLVTAGIKPVS 301 (448)
Q Consensus 288 La~~l~~RGlkv~~ 301 (448)
++++|.++|+-+.+
T Consensus 182 ~~el~~~~g~pi~G 195 (367)
T 1gr0_A 182 WAKKFTDARVPIVG 195 (367)
T ss_dssp HHHHHHHHTCEEEE
T ss_pred HHHHHHHcCCCEec
Confidence 99999999997643
No 9
>3cin_A MYO-inositol-1-phosphate synthase-related protein; structura genomics, joint center for structural genomics, JCSG; HET: NAD; 1.70A {Thermotoga maritima MSB8}
Probab=96.10 E-value=3.5e-05 Score=79.39 Aligned_cols=145 Identities=8% Similarity=0.067 Sum_probs=88.9
Q ss_pred ChHHHHHHHHH-HHHhhhhcCCCCceEEEecCccccccccccCC--Cccccccccccccccccccccchhhhhhhccccc
Q psy9027 138 TKQEVLDQVRR-DIRDFKQKNSLDQVIVLWTANTERFSDIVQGL--NDTAENLLEGVAVNNICRGFYDQVIVLWTANTER 214 (448)
Q Consensus 138 ~~~~~ie~v~a-DI~~fK~~~~L~~aIv~~~n~Te~~~~~vp~~--~v~~~~~ldgv~~~~~~~~~~~~~~~~~~~~~~~ 214 (448)
+...+++++.+ ||++.|++++|+|||+..||||+++.+ +|.. +|.++++.+....... ..+. ....+.
T Consensus 53 ~~~~Di~vvgg~DId~~kvgk~l~eAi~~~~n~~~~~~~-~p~~~~~v~~~~~~~~~~~~~~----~~~~----~~~~e~ 123 (394)
T 3cin_A 53 IGFEDIKIVGSYDVDRAKIGKKLSEVVKQYWNDVDSLTS-DPEIRKGVHLGSVRNLPIEAEG----LEDS----MTLKEA 123 (394)
T ss_dssp SCGGGEEEEEEEECBTTTTTSBHHHHHHHHCTTCCCCSS-CCBCEECCCTTTTTTSSCCBCC----GGGS----SCHHHH
T ss_pred CCCCCcEEEEEecCCcchhHHHHHHHHhhchhccccccC-ccccccCcccccccCcCccccc----hhhh----hhHHHh
Confidence 44568889988 999999999999999999999999998 7877 4444555433221111 0000 011123
Q ss_pred cchhhhhhhhhHHHHH-H------HhhcCCCccChhHHHHHHHHHcCC-CCCcc--------hHHHHHHcCCceecCCCC
Q psy9027 215 FSDIVQGLNDTAENLL-E------SIQKNAAEVSPSTIFAVASILEGN-TFVPG--------AIDLAEKKKVFIAGDDFK 278 (448)
Q Consensus 215 ~~dv~~~l~~t~~~ll-~------~L~~g~~ei~aS~~YA~AAl~aG~-afVna--------~~elae~~gvpi~GDD~K 278 (448)
.+++++.+++...+++ + ++|.++++ .. .+|++++. .-+++ +.+.+.++|+|.+=-
T Consensus 124 i~~~~k~~~~~~~~Vvvn~asTE~ylpvgs~~--~~----~~a~~~~~~~~i~as~~YA~AAl~~aa~~aG~~fvN~--- 194 (394)
T 3cin_A 124 VDTLVKEWTELDPDVIVNTCTTEAFVPFGNKE--DL----LKAIENNDKERLTATQVYAYAAALYANKRGGAAFVNV--- 194 (394)
T ss_dssp HHHHHHHHHHHCCSEEEECCCCCCCCCCSSHH--HH----HHHHHTTCTTTCCHHHHHHHHHHHHHHHHTCEEEEEC---
T ss_pred HHHHHHHhhhccceeEeeecccccCCCCCCHH--HH----HHHhhccccccCChhHHHHHHHHHhhhhhcCCceecC---
Confidence 3345555565555544 4 77877655 22 46666664 23553 223334889886521
Q ss_pred CCcchhh-HHHHHHHHHcCCcee
Q psy9027 279 SGQTKVK-SVLVDFLVTAGIKPV 300 (448)
Q Consensus 279 SGqT~lk-svLa~~l~~RGlkv~ 300 (448)
+=+.+.. -.++++|.++|+-+.
T Consensus 195 ~P~~ia~~P~~~ela~~~gvpi~ 217 (394)
T 3cin_A 195 IPTFIANDPAFVELAKENNLVVF 217 (394)
T ss_dssp SSSCSTTCHHHHHHHHHTTEEEE
T ss_pred CCccccCcHHHHHHHHHcCCcEe
Confidence 1122222 469999999999764
No 10
>2kxe_A DNA polymerase II small subunit; D-family, archara, helical BU transferase; HET: DNA; NMR {Pyrococcus horikoshii}
Probab=32.87 E-value=31 Score=27.43 Aligned_cols=62 Identities=23% Similarity=0.397 Sum_probs=44.0
Q ss_pred HHHHhhcCCCccChhHHHHHHHH-HcCCCCCcchHHHHHHcCCceecCCCCCCcchhhHHHHHHHHHcCCcee
Q psy9027 229 LLESIQKNAAEVSPSTIFAVASI-LEGNTFVPGAIDLAEKKKVFIAGDDFKSGQTKVKSVLVDFLVTAGIKPV 300 (448)
Q Consensus 229 ll~~L~~g~~ei~aS~~YA~AAl-~aG~afVna~~elae~~gvpi~GDD~KSGqT~lksvLa~~l~~RGlkv~ 300 (448)
+++.|-.|.--|+||.+|-..-- +.|.--+.-+++.|+.+|.+|+-+++ --+||...|+.|.
T Consensus 7 lVk~L~~n~YLiTPsAYyLL~~~ykkg~FsL~ELiKFAksrgtFvId~~l----------A~EFL~~kG~~~~ 69 (75)
T 2kxe_A 7 FVKGLMKNGYLITPSAYYLLVGHFNEGKFSLIELIKFAKSRETFIIDDEI----------ANEFLKSIGAEVE 69 (75)
T ss_dssp HHHHHHTTTCEECHHHHHHHHHHHHTTSSCHHHHHHHHHHHTCSEECHHH----------HHHHHHHHTCCCC
T ss_pred HHHHHHHCCceeCchHHHHHHHHhhcccccHHHHHHHHHhcCcEEechHH----------HHHHHHhcCceec
Confidence 45555566667899999875443 44554455699999999999987654 3478888887663
No 11
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=31.86 E-value=36 Score=32.25 Aligned_cols=45 Identities=18% Similarity=0.136 Sum_probs=37.8
Q ss_pred cCCceecCCCCCCcchhhHHHHHHHHHcCCceeEEEeeeecCCcc
Q psy9027 268 KKVFIAGDDFKSGQTKVKSVLVDFLVTAGIKPVSIVSYNHLGNND 312 (448)
Q Consensus 268 ~gvpi~GDD~KSGqT~lksvLa~~l~~RGlkv~~~~q~NilGN~D 312 (448)
+.+.|.|-|--+|-|.+...|+..|+.||++|.-+=-.+.+-+.|
T Consensus 27 ~~i~Itgt~t~vGKT~vt~gL~~~l~~~G~~V~~fKPv~~g~~~~ 71 (251)
T 3fgn_A 27 TILVVTGTGTGVGKTVVCAALASAARQAGIDVAVCKPVQTGTARG 71 (251)
T ss_dssp EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEEEEECCGGGT
T ss_pred CEEEEEeCCCCCcHHHHHHHHHHHHHHCCCeEEEEeeeecCCCCC
Confidence 457899999989999999999999999999998876666654433
No 12
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=29.57 E-value=30 Score=31.93 Aligned_cols=42 Identities=26% Similarity=0.381 Sum_probs=35.7
Q ss_pred cCCceecCCCCCCcchhhHHHHHHHHHcCCceeEEEeeeecC
Q psy9027 268 KKVFIAGDDFKSGQTKVKSVLVDFLVTAGIKPVSIVSYNHLG 309 (448)
Q Consensus 268 ~gvpi~GDD~KSGqT~lksvLa~~l~~RGlkv~~~~q~NilG 309 (448)
+++.|.|-|--+|-|.+...|+..|+.||.+|.-+=-.+.+.
T Consensus 5 k~i~Itgt~t~vGKT~vt~~L~~~l~~~G~~V~~~KPv~~g~ 46 (228)
T 3of5_A 5 KKFFIIGTDTEVGKTYISTKLIEVCEHQNIKSLCLKPVASGQ 46 (228)
T ss_dssp EEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEECSEEESB
T ss_pred cEEEEEeCCCCCCHHHHHHHHHHHHHHCCCeeEEecceeecC
Confidence 467899999989999999999999999999998765455543
No 13
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=25.53 E-value=38 Score=31.93 Aligned_cols=43 Identities=19% Similarity=0.361 Sum_probs=37.5
Q ss_pred cCCceecCCCCCCcchhhHHHHHHHHHcCCceeEEEeeeecCC
Q psy9027 268 KKVFIAGDDFKSGQTKVKSVLVDFLVTAGIKPVSIVSYNHLGN 310 (448)
Q Consensus 268 ~gvpi~GDD~KSGqT~lksvLa~~l~~RGlkv~~~~q~NilGN 310 (448)
+.+.|.|-|--+|-|.+-..|+..|+.+|++|.-+=-.+.+.+
T Consensus 22 k~i~ItgT~t~vGKT~vs~gL~~~L~~~G~~V~~fKPv~~g~~ 64 (242)
T 3qxc_A 22 HMLFISATNTNAGKTTCARLLAQYCNACGVKTILLKPIETGVN 64 (242)
T ss_dssp EEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEECCEECSCC
T ss_pred cEEEEEeCCCCCcHHHHHHHHHHHHHhCCCceEEEeeeecCCc
Confidence 5688999999999999999999999999999988766666554
No 14
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=21.70 E-value=67 Score=31.18 Aligned_cols=60 Identities=22% Similarity=0.211 Sum_probs=38.3
Q ss_pred HHHHHHHHHcCCCCCc---------chHHHHHHcCCceecCCCCC-Ccc----------hhhH------HHHHHHHHcCC
Q psy9027 244 TIFAVASILEGNTFVP---------GAIDLAEKKKVFIAGDDFKS-GQT----------KVKS------VLVDFLVTAGI 297 (448)
Q Consensus 244 ~~YA~AAl~aG~afVn---------a~~elae~~gvpi~GDD~KS-GqT----------~lks------vLa~~l~~RGl 297 (448)
.--|+|||++|...|| .+.+++.+.|+|++--=.+. -+| ++.. -..+.+...|+
T Consensus 90 ~~va~aAl~aGa~iINdvsg~~~d~~m~~~~a~~~~~vVlmh~~G~p~tm~~~~~~y~dv~~~v~~~l~~~i~~a~~~Gi 169 (280)
T 1eye_A 90 ADVARAALQNGAQMVNDVSGGRADPAMGPLLAEADVPWVLMHWRAVSADTPHVPVRYGNVVAEVRADLLASVADAVAAGV 169 (280)
T ss_dssp HHHHHHHHHTTCCEEEETTTTSSCTTHHHHHHHHTCCEEEECCCCSCTTCTTSCCCCSSHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHcCCCEEEECCCCCCCHHHHHHHHHhCCeEEEEcCCCCCcchhhcCcchhHHHHHHHHHHHHHHHHHHHcCC
Confidence 4457899999965544 48889999999988754431 112 1222 34455678899
Q ss_pred ceeEEE
Q psy9027 298 KPVSIV 303 (448)
Q Consensus 298 kv~~~~ 303 (448)
+..+++
T Consensus 170 ~~~~Ii 175 (280)
T 1eye_A 170 DPARLV 175 (280)
T ss_dssp CGGGEE
T ss_pred ChhhEE
Confidence 865443
Done!