Query psy903
Match_columns 739
No_of_seqs 378 out of 3926
Neff 11.8
Searched_HMMs 29240
Date Fri Aug 16 17:12:45 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy903.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/903hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1n11_A Ankyrin; clathrin, BAND 100.0 1.2E-60 4.1E-65 494.0 48.4 395 20-585 3-400 (437)
2 1n11_A Ankyrin; clathrin, BAND 100.0 3.5E-60 1.2E-64 490.4 48.4 391 145-647 3-401 (437)
3 4g8k_A 2-5A-dependent ribonucl 100.0 8.5E-45 2.9E-49 360.8 34.4 285 1-350 28-328 (337)
4 4g8k_A 2-5A-dependent ribonucl 100.0 7.5E-43 2.6E-47 346.8 35.5 92 528-619 238-330 (337)
5 1wdy_A 2-5A-dependent ribonucl 100.0 2.4E-42 8.3E-47 336.0 33.1 260 1-320 8-283 (285)
6 3utm_A Tankyrase-1; tankyrase, 100.0 1.3E-40 4.5E-45 334.5 35.1 320 192-663 26-351 (351)
7 1wdy_A 2-5A-dependent ribonucl 100.0 6.7E-41 2.3E-45 325.8 31.2 262 29-350 3-280 (285)
8 3utm_A Tankyrase-1; tankyrase, 100.0 1.2E-40 4.1E-45 334.7 33.7 324 123-601 24-350 (351)
9 3d9h_A CDNA FLJ77766, highly s 100.0 5.5E-40 1.9E-44 316.0 24.7 252 1-317 18-281 (285)
10 2fo1_E LIN-12 protein; beta-ba 100.0 2.4E-40 8.2E-45 331.9 22.1 308 1-348 40-371 (373)
11 1yyh_A HN1;, notch 1, ankyrin 100.0 2E-39 6.9E-44 307.1 23.1 231 22-312 1-245 (253)
12 2xai_A ASB-9, ankyrin repeat a 100.0 3.1E-39 1.1E-43 307.1 23.2 250 30-344 2-259 (261)
13 3d9h_A CDNA FLJ77766, highly s 100.0 6.5E-39 2.2E-43 308.6 25.6 267 28-348 12-279 (285)
14 2xai_A ASB-9, ankyrin repeat a 100.0 3.6E-39 1.2E-43 306.7 21.5 247 1-311 6-259 (261)
15 3ljn_A Hypothetical protein; a 100.0 2E-39 6.7E-44 326.0 15.5 262 24-314 13-313 (364)
16 3ljn_A Hypothetical protein; a 100.0 4.5E-39 1.5E-43 323.4 18.0 230 55-314 11-268 (364)
17 3kea_A K1L; tropism, ANK repea 100.0 1E-38 3.5E-43 306.9 19.1 248 4-322 5-253 (285)
18 2fo1_E LIN-12 protein; beta-ba 100.0 9.3E-39 3.2E-43 320.4 19.6 311 32-432 38-371 (373)
19 3b7b_A Euchromatic histone-lys 100.0 3E-37 1E-41 290.1 27.3 229 22-311 2-231 (237)
20 1k1a_A B-cell lymphoma 3-encod 100.0 3.5E-38 1.2E-42 297.6 19.8 229 25-314 3-240 (241)
21 3aji_A 26S proteasome non-ATPa 100.0 8.5E-38 2.9E-42 292.5 21.7 220 1-280 9-229 (231)
22 1yyh_A HN1;, notch 1, ankyrin 100.0 1.9E-37 6.3E-42 293.6 24.1 197 148-345 2-212 (253)
23 4b93_B Ankyrin repeat domain-c 100.0 2E-38 6.7E-43 300.5 14.5 222 1-282 14-245 (269)
24 1k1a_A B-cell lymphoma 3-encod 100.0 2.4E-37 8.1E-42 292.0 21.5 221 1-280 12-240 (241)
25 3b7b_A Euchromatic histone-lys 100.0 6.7E-37 2.3E-41 287.7 24.4 217 1-277 14-231 (237)
26 1oy3_D Transcription factor in 100.0 2.8E-37 9.7E-42 299.3 21.9 251 24-334 2-269 (282)
27 1oy3_D Transcription factor in 100.0 1.9E-37 6.3E-42 300.6 17.8 254 1-267 12-269 (282)
28 4b93_B Ankyrin repeat domain-c 100.0 1.4E-37 4.9E-42 294.5 15.2 237 26-315 6-244 (269)
29 3aji_A 26S proteasome non-ATPa 100.0 4.4E-36 1.5E-40 280.9 24.6 226 29-315 4-230 (231)
30 2f8y_A Notch homolog 1, transl 100.0 1.9E-36 6.6E-41 281.6 22.0 215 9-283 2-218 (223)
31 3eu9_A Huntingtin-interacting 100.0 7.7E-36 2.6E-40 281.7 25.7 222 1-281 12-235 (240)
32 3eu9_A Huntingtin-interacting 100.0 2.9E-35 9.8E-40 277.8 27.8 231 119-349 5-236 (240)
33 2dzn_A Probable 26S proteasome 100.0 1.2E-35 4.2E-40 277.4 21.3 214 1-277 5-226 (228)
34 3kea_A K1L; tropism, ANK repea 100.0 3.9E-36 1.3E-40 289.0 17.0 214 131-350 7-222 (285)
35 1s70_B 130 kDa myosin-binding 100.0 4E-35 1.4E-39 286.4 19.1 242 1-312 43-286 (299)
36 2dzn_A Probable 26S proteasome 100.0 2.6E-34 8.8E-39 268.4 23.5 218 123-344 2-226 (228)
37 2f8y_A Notch homolog 1, transl 100.0 2.5E-34 8.4E-39 267.3 22.9 215 134-350 2-218 (223)
38 1sw6_A Regulatory protein SWI6 100.0 1.1E-36 3.8E-41 298.9 7.3 272 6-334 27-327 (327)
39 1s70_B 130 kDa myosin-binding 100.0 1.6E-34 5.3E-39 282.3 17.5 274 3-345 3-286 (299)
40 2rfa_A Transient receptor pote 100.0 2.1E-33 7.1E-38 262.7 20.8 149 135-283 49-224 (232)
41 1ikn_D Protein (I-kappa-B-alph 100.0 1.1E-34 3.9E-39 271.8 9.6 212 26-296 3-225 (236)
42 2rfa_A Transient receptor pote 100.0 1.9E-32 6.4E-37 256.3 22.4 198 122-319 2-226 (232)
43 4gpm_A Engineered protein OR26 100.0 2.6E-32 9E-37 236.9 21.1 159 125-284 6-164 (169)
44 4gpm_A Engineered protein OR26 100.0 1.7E-32 5.7E-37 238.1 18.6 155 2-216 8-162 (169)
45 3hra_A Ankyrin repeat family p 100.0 7.2E-32 2.5E-36 246.1 23.1 191 29-279 3-201 (201)
46 1ikn_D Protein (I-kappa-B-alph 100.0 1.1E-33 3.6E-38 265.2 11.2 205 1-264 11-227 (236)
47 1sw6_A Regulatory protein SWI6 100.0 2.7E-34 9.3E-39 281.9 6.1 259 127-451 23-326 (327)
48 2etb_A Transient receptor pote 100.0 1.3E-32 4.3E-37 261.5 14.8 197 30-282 1-247 (256)
49 2pnn_A Transient receptor pote 100.0 2.2E-32 7.5E-37 262.4 13.8 206 20-281 2-258 (273)
50 3hra_A Ankyrin repeat family p 100.0 1.3E-30 4.6E-35 237.6 24.6 191 121-313 3-201 (201)
51 2etb_A Transient receptor pote 100.0 1.9E-31 6.5E-36 253.3 16.2 192 123-314 2-245 (256)
52 2pnn_A Transient receptor pote 100.0 2.2E-31 7.4E-36 255.5 14.7 210 117-326 7-270 (273)
53 3jxi_A Vanilloid receptor-rela 100.0 1.1E-30 3.6E-35 249.0 15.6 202 28-284 2-253 (260)
54 4hbd_A KN motif and ankyrin re 100.0 2.6E-30 8.8E-35 246.8 13.7 143 135-278 123-272 (276)
55 3jxi_A Vanilloid receptor-rela 100.0 6.8E-30 2.3E-34 243.4 14.3 196 121-316 3-251 (260)
56 2y1l_E Darpin-8.4; hydrolase-i 100.0 2.4E-28 8.2E-33 214.9 20.3 161 118-279 9-169 (169)
57 2rfm_A Putative ankyrin repeat 100.0 8.5E-29 2.9E-33 223.3 17.5 174 10-245 16-189 (192)
58 4hbd_A KN motif and ankyrin re 100.0 4.4E-29 1.5E-33 238.3 15.8 176 136-313 89-273 (276)
59 3v31_A Ankyrin repeat family A 100.0 3E-28 1E-32 214.2 17.4 160 122-282 2-161 (167)
60 1ihb_A P18-INK4C(INK6), cyclin 100.0 3.9E-28 1.3E-32 212.5 17.7 158 122-281 4-162 (162)
61 2vge_A RELA-associated inhibit 100.0 1.7E-31 5.8E-36 246.3 -4.1 207 14-282 1-215 (229)
62 2rfm_A Putative ankyrin repeat 100.0 7E-28 2.4E-32 217.3 18.7 162 117-279 29-190 (192)
63 3v30_A DNA-binding protein rfx 100.0 4.9E-28 1.7E-32 214.0 16.4 160 124-284 3-163 (172)
64 2aja_A Ankyrin repeat family p 100.0 1.1E-31 3.6E-36 264.2 -8.2 257 125-428 94-370 (376)
65 3v30_A DNA-binding protein rfx 100.0 7.9E-28 2.7E-32 212.7 17.3 170 156-326 2-171 (172)
66 1ihb_A P18-INK4C(INK6), cyclin 100.0 1.4E-27 4.9E-32 208.9 17.5 159 155-315 4-162 (162)
67 1awc_B Protein (GA binding pro 100.0 3.4E-27 1.2E-31 203.7 19.3 150 124-275 3-152 (153)
68 2aja_A Ankyrin repeat family p 100.0 4.5E-31 1.6E-35 259.7 -5.9 204 124-343 129-369 (376)
69 2y1l_E Darpin-8.4; hydrolase-i 100.0 4.6E-27 1.6E-31 206.7 19.8 153 192-345 16-168 (169)
70 3f6q_A Integrin-linked protein 99.9 4.3E-27 1.5E-31 209.2 16.5 164 121-285 3-167 (179)
71 3v31_A Ankyrin repeat family A 99.9 1.1E-26 3.6E-31 204.3 18.7 155 156-312 3-157 (167)
72 1awc_B Protein (GA binding pro 99.9 1.5E-26 5.1E-31 199.7 18.1 150 157-309 3-152 (153)
73 3twr_A Tankyrase-2; ankyrin re 99.9 5.5E-27 1.9E-31 205.6 15.2 159 120-280 5-164 (165)
74 1bd8_A P19INK4D CDK4/6 inhibit 99.9 2.2E-26 7.4E-31 199.8 18.2 153 123-278 2-155 (156)
75 3f6q_A Integrin-linked protein 99.9 1.2E-26 4.3E-31 206.2 16.9 167 155-322 4-170 (179)
76 3twr_A Tankyrase-2; ankyrin re 99.9 1.1E-26 3.7E-31 203.8 14.9 161 152-314 4-164 (165)
77 2vge_A RELA-associated inhibit 99.9 1E-29 3.5E-34 234.4 -5.5 156 173-328 2-161 (229)
78 1bd8_A P19INK4D CDK4/6 inhibit 99.9 9.1E-26 3.1E-30 195.8 17.5 153 31-245 2-155 (156)
79 1ycs_B 53BP2, P53BP2; ankyrin 99.9 6.5E-27 2.2E-31 218.5 7.2 163 155-319 4-168 (239)
80 1ycs_B 53BP2, P53BP2; ankyrin 99.9 1.5E-26 5.2E-31 216.0 7.4 181 120-302 2-193 (239)
81 1d9s_A Cyclin-dependent kinase 99.9 3.5E-25 1.2E-29 186.4 13.0 134 146-281 2-136 (136)
82 1d9s_A Cyclin-dependent kinase 99.9 1.3E-24 4.3E-29 183.0 14.4 134 21-215 2-136 (136)
83 3t8k_A Uncharacterized protein 99.9 2.2E-25 7.5E-30 197.0 9.1 154 124-280 7-178 (186)
84 3t8k_A Uncharacterized protein 99.9 2.6E-25 9E-30 196.5 9.0 162 1-246 9-177 (186)
85 1bi7_B P16INK4A, MTS1, multipl 99.9 1.5E-24 5.3E-29 187.4 12.5 144 24-228 5-149 (156)
86 1bi7_B P16INK4A, MTS1, multipl 99.9 1.9E-24 6.5E-29 186.9 11.3 141 120-262 9-150 (156)
87 2jab_A H10-2-G3; HER2, darpin, 99.9 3.2E-23 1.1E-27 174.4 14.5 121 123-244 14-134 (136)
88 1n0r_A 4ANK, 4 ankyrin repeats 99.9 7.1E-23 2.4E-27 170.5 16.2 124 156-280 2-125 (126)
89 2jab_A H10-2-G3; HER2, darpin, 99.9 4.6E-23 1.6E-27 173.4 15.1 127 152-279 10-136 (136)
90 1n0r_A 4ANK, 4 ankyrin repeats 99.9 2.7E-22 9.3E-27 167.0 15.8 125 123-248 2-126 (126)
91 3c5r_A BARD-1, BRCA1-associate 99.9 2.6E-23 9E-28 175.4 8.5 133 146-280 1-133 (137)
92 3deo_A Signal recognition part 99.9 1.1E-23 3.9E-28 187.5 3.8 140 153-312 41-181 (183)
93 3deo_A Signal recognition part 99.9 4.9E-22 1.7E-26 176.8 13.1 139 122-278 43-181 (183)
94 3ui2_A Signal recognition part 99.9 7.2E-22 2.5E-26 184.4 13.1 138 123-278 45-182 (244)
95 2b0o_E UPLC1; arfgap, structur 99.9 3E-21 1E-25 185.3 16.9 137 124-267 152-297 (301)
96 3c5r_A BARD-1, BRCA1-associate 99.9 8.3E-22 2.8E-26 166.1 9.5 122 189-311 9-130 (137)
97 3ui2_A Signal recognition part 99.9 1.5E-21 5.1E-26 182.3 12.1 142 153-314 42-184 (244)
98 3aaa_C Myotrophin, protein V-1 99.9 1.5E-21 5.2E-26 160.9 10.3 108 155-263 6-113 (123)
99 2b0o_E UPLC1; arfgap, structur 99.9 1.9E-21 6.5E-26 186.7 11.6 138 158-302 153-298 (301)
100 3aaa_C Myotrophin, protein V-1 99.8 6.8E-21 2.3E-25 156.9 11.8 118 120-238 4-121 (123)
101 3lvq_E ARF-GAP with SH3 domain 99.8 3.1E-20 1.1E-24 192.8 14.9 143 27-232 128-276 (497)
102 3ehr_A Osteoclast-stimulating 99.8 7.7E-21 2.6E-25 175.5 9.1 129 153-282 70-199 (222)
103 3ehr_A Osteoclast-stimulating 99.8 1.2E-20 4.1E-25 174.2 10.2 134 122-256 72-206 (222)
104 1dcq_A PYK2-associated protein 99.8 2.4E-19 8.2E-24 170.0 19.3 92 190-281 169-263 (278)
105 1n0q_A 3ANK, 3 ankyrin repeats 99.8 7.7E-20 2.6E-24 141.7 12.6 91 190-280 2-92 (93)
106 3jue_A Arfgap with coiled-coil 99.8 9.5E-20 3.2E-24 178.4 14.0 126 155-280 198-325 (368)
107 1dcq_A PYK2-associated protein 99.8 5E-19 1.7E-23 167.9 16.5 192 119-315 62-263 (278)
108 3jue_A Arfgap with coiled-coil 99.8 2.4E-19 8.3E-24 175.5 14.4 142 123-265 199-346 (368)
109 3lvq_E ARF-GAP with SH3 domain 99.8 4.4E-19 1.5E-23 184.1 17.2 124 159-282 135-266 (497)
110 1n0q_A 3ANK, 3 ankyrin repeats 99.8 5E-19 1.7E-23 137.1 12.4 93 155-248 1-93 (93)
111 2l6b_A NR1C; ankyrin, consensu 99.8 5.2E-19 1.8E-23 143.6 9.1 109 151-260 4-112 (115)
112 2l6b_A NR1C; ankyrin, consensu 99.7 2.9E-18 9.8E-23 139.2 8.6 100 188-287 7-106 (115)
113 2zgd_A 3 repeat synthetic anky 99.7 1.4E-16 4.8E-21 127.5 10.4 86 190-275 24-109 (110)
114 2zgd_A 3 repeat synthetic anky 99.6 6.2E-16 2.1E-20 123.7 10.2 92 150-242 18-109 (110)
115 4g26_A Pentatricopeptide repea 55.0 19 0.00065 36.6 6.5 26 127-152 33-62 (501)
116 3zrh_A Ubiquitin thioesterase 45.4 36 0.0012 32.4 5.9 52 3-54 27-92 (454)
117 3mkq_B Coatomer subunit alpha; 39.2 1E+02 0.0034 25.8 7.2 130 124-277 9-139 (177)
118 4g26_A Pentatricopeptide repea 36.9 87 0.003 31.7 8.0 14 137-150 91-104 (501)
119 1gp8_A Protein (scaffolding pr 35.8 26 0.00088 20.1 2.1 16 3-18 18-33 (40)
No 1
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=1.2e-60 Score=493.96 Aligned_cols=395 Identities=28% Similarity=0.335 Sum_probs=340.0
Q ss_pred cCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHHccccccccCCCCCcchhHHHhhccccccccCCCCCCCHHHHHhhhhh
Q psy903 20 EGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSS 99 (739)
Q Consensus 20 ~g~~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (739)
.|++++..+..|+||||+|+..|+.++|++|+++|++++..+..+. ||||+|+..
T Consensus 3 ~g~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~~~-t~L~~A~~~------------------------ 57 (437)
T 1n11_A 3 PGISGGGGGESGLTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVE-TPLHMAARA------------------------ 57 (437)
T ss_dssp ------------CCHHHHHHHHTCHHHHHHHHHTTCCSCCSSSCCC-CHHHHHHHH------------------------
T ss_pred CCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCC-CHHHHHHHc------------------------
Confidence 5889999999999999999999999999999999999988776664 666666654
Q ss_pred hhchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCC
Q psy903 100 VSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMH 179 (739)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~ 179 (739)
|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|+++|
T Consensus 58 ----------------------------------g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g 103 (437)
T 1n11_A 58 ----------------------------------GHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENN 103 (437)
T ss_dssp ----------------------------------TCHHHHHHHHHHTCCSSCCCTTSCCHHHHHHHHTCHHHHHHHHHHT
T ss_pred ----------------------------------CCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhCC
Confidence 5799999999999999999999999999999999999999999999
Q ss_pred CCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcH
Q psy903 180 ANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTP 259 (739)
Q Consensus 180 ~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~ 259 (739)
++++..+.. |.||||+|+..|+.+++++|++++++++..+..|.||||+|+..|+.+++++|+++|++++..+..|.||
T Consensus 104 a~~~~~~~~-g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~ 182 (437)
T 1n11_A 104 ANPNLATTA-GHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTP 182 (437)
T ss_dssp CCTTCCCTT-CCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSCCCH
T ss_pred CCCCCCCCC-CCcHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCH
Confidence 998877655 5699999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCChHHHHHHHHcCCCCcccCcCccCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCcCCcHHHHHHhCCchHHH
Q psy903 260 LMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVA 339 (739)
Q Consensus 260 L~~A~~~~~~~ii~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~ 339 (739)
||+|+..|+.+++++|+++|.++... +..+.|||++|+..++.+++++|++.|++++..+..|.|||++|+..++.+++
T Consensus 183 L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v 261 (437)
T 1n11_A 183 LHVAVHHNNLDIVKLLLPRGGSPHSP-AWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMV 261 (437)
T ss_dssp HHHHHHTTCHHHHHHHGGGTCCSCCC-CTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHH
T ss_pred HHHHHHcCCHHHHHHHHhCCCCCCCc-CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHCCCHHHH
Confidence 99999999999999999999988764 44589999999999999999999999999999999999999999998888888
Q ss_pred HHHHHcCCCchhhhcccCCCCCCCCCCCCCcccccchHHHHHHhcCCHHHHHHHHHCCCCCccCCCCCCCHHHHHHHcCc
Q psy903 340 KLLLDSGAQSVSAYARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGY 419 (739)
Q Consensus 340 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~ 419 (739)
++|++++++ ++..+..|.||||.|+..++
T Consensus 262 ~~Ll~~~~~---------------------------------------------------~~~~~~~g~t~L~~A~~~~~ 290 (437)
T 1n11_A 262 ALLLSKQAN---------------------------------------------------GNLGNKSGLTPLHLVAQEGH 290 (437)
T ss_dssp HHHHTTTCC---------------------------------------------------TTCCCTTCCCHHHHHHHHTC
T ss_pred HHHHhcCCC---------------------------------------------------CCCCCCCCCCHHHHHHHcCC
Confidence 887765543 55677889999999999999
Q ss_pred HHHHHHHHHcCCCcccccCCCCCcHHHHHHHcCCccchhhHHHhhhccCCCCCCcccccchhhhhhccCccccccCcCCC
Q psy903 420 YELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIPGAKINAHTEETQ 499 (739)
Q Consensus 420 ~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 499 (739)
.+++++|++++.+++..+.. +
T Consensus 291 ~~~~~~Ll~~g~~~~~~~~~-----------------------------------------------------------g 311 (437)
T 1n11_A 291 VPVADVLIKHGVMVDATTRM-----------------------------------------------------------G 311 (437)
T ss_dssp HHHHHHHHHHTCCTTCCCSS-----------------------------------------------------------C
T ss_pred HHHHHHHHhCCccCCCCCCC-----------------------------------------------------------C
Confidence 99999999988877655432 4
Q ss_pred CCHHHHHHhcCCHHHHHHHHHcCCCCCC---CCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCcHH
Q psy903 500 ETALTLACCGGFLDVADFLLKNGANIEL---GASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTD 576 (739)
Q Consensus 500 ~~~l~~a~~~~~~~~v~~Ll~~~~~~~~---~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~l~~A~~~~~~~ 576 (739)
.||||+|+..|+.+++++|+++|++++. .|.||||+|+..|+.+++++|+++|++++.+|.+|.||+++|.+.|+.+
T Consensus 312 ~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~A~~~g~~~ 391 (437)
T 1n11_A 312 YTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYIS 391 (437)
T ss_dssp CCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCSSSCCHHHHHHHTTCHH
T ss_pred CCHHHHHHHcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHCChHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCcHH
Confidence 5777777777888888888888887743 5788999999999999999999999999888888999999998888888
Q ss_pred HHHHHHhCC
Q psy903 577 VADLLLSYG 585 (739)
Q Consensus 577 iv~~Ll~~~ 585 (739)
++++|....
T Consensus 392 ~~~~l~~~~ 400 (437)
T 1n11_A 392 VTDVLKVVT 400 (437)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHhcc
Confidence 888876543
No 2
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=3.5e-60 Score=490.45 Aligned_cols=391 Identities=30% Similarity=0.365 Sum_probs=311.1
Q ss_pred cCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCC
Q psy903 145 EGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGN 224 (739)
Q Consensus 145 ~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~ 224 (739)
.|++++..+..|.||||+|+..|+.++|++|++.|++++..+.. +.||||+|+..|+.+++++|+++|++++.++..|.
T Consensus 3 ~g~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~-~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~ 81 (437)
T 1n11_A 3 PGISGGGGGESGLTPLHVASFMGHLPIVKNLLQRGASPNVSNVK-VETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQ 81 (437)
T ss_dssp ------------CCHHHHHHHHTCHHHHHHHHHTTCCSCCSSSC-CCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTSC
T ss_pred CCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCC-CCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCC
Confidence 57788888999999999999999999999999999988776654 46999999999999999999999999999999999
Q ss_pred cHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCCCCcccCcCccCCHHHHHHHcCCHH
Q psy903 225 TPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLD 304 (739)
Q Consensus 225 t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~ 304 (739)
||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|++++.+.... +..+.||||+|+..|+.+
T Consensus 82 t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~-~~~g~t~L~~A~~~g~~~ 160 (437)
T 1n11_A 82 TPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACM-TKKGFTPLHVAAKYGKVR 160 (437)
T ss_dssp CHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCC-CTTSCCHHHHHHHTTCHH
T ss_pred CHHHHHHHCCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcCC-CCCCCCHHHHHHHcCCHH
Confidence 9999999999999999999999999999999999999999999999999999998887654 445889999999999999
Q ss_pred HHHHHHHcCCCCCCCCCcCCcHHHHHHhCCchHHHHHHHHcCCCchhhhcccCCCCCCCCCCCCCcccccchHHHHHHhc
Q psy903 305 MVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCERPSSISYTYSRSLVQACSD 384 (739)
Q Consensus 305 ~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~ 384 (739)
++++|+++|++++..+..|.|||++|+..++.+++++|++++.+
T Consensus 161 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------------------------------------ 204 (437)
T 1n11_A 161 VAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGS------------------------------------ 204 (437)
T ss_dssp HHHHHHHTTCCTTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCC------------------------------------
T ss_pred HHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCC------------------------------------
Confidence 99999999999999999999999999988888888888776554
Q ss_pred CCHHHHHHHHHCCCCCccCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcCCccchhhHHHhh
Q psy903 385 GDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQCNLNESVSAY 464 (739)
Q Consensus 385 ~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~ 464 (739)
++..+..|.|||++|+..++.+++++|++.+.+++..+.
T Consensus 205 ---------------~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~-------------------------- 243 (437)
T 1n11_A 205 ---------------PHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESV-------------------------- 243 (437)
T ss_dssp ---------------SCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT--------------------------
T ss_pred ---------------CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCC--------------------------
Confidence 344566678888888888888888888887776554332
Q ss_pred hccCCCCCCcccccchhhhhhccCccccccCcCCCCCHHHHHHhcCCHHHHHHHHHcCCCCC---CCCCcHHHHHHHcCc
Q psy903 465 ARHDFFPNDKSVNGLQASVILIPGAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIE---LGASTPLMEAAQEGH 541 (739)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ll~~~~~~~---~~~~t~L~~A~~~~~ 541 (739)
.+.|||+.|+..|+.+++++|++++++++ ..|.||||+|+..|+
T Consensus 244 ---------------------------------~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~ 290 (437)
T 1n11_A 244 ---------------------------------QGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGH 290 (437)
T ss_dssp ---------------------------------TCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred ---------------------------------CCCCHHHHHHHCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCC
Confidence 23466666666677777777777766653 356788888888888
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCC-----CCcHHHHHHHcCCHHHHHHHhhCCCCC
Q psy903 542 LELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANLD-----NSTMLIEAAKGGHANVVQLLLDFPRSV 616 (739)
Q Consensus 542 ~~~v~~Ll~~g~~~~~~d~~g~t~l~~A~~~~~~~iv~~Ll~~~~~~~-----~~~~l~~A~~~~~~~~v~~L~~~~~~~ 616 (739)
.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++ |.||||.|+..|+.++|++|+++|+++
T Consensus 291 ~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~ 370 (437)
T 1n11_A 291 VPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASP 370 (437)
T ss_dssp HHHHHHHHHHTCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCS
T ss_pred HHHHHHHHhCCccCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHCChHHHHHHHHHCcCCC
Confidence 888888888888888888888888888888888888877777776653 667777777777777777888778888
Q ss_pred CcCCCCCCcHHHHHHHcCCHHHHHHHHHcCC
Q psy903 617 HAKTQTGDTALTYACENGHTDVADLLLSYGA 647 (739)
Q Consensus 617 ~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~ 647 (739)
+.+|..|.|||++|++.|+.+++++|.....
T Consensus 371 ~~~~~~g~t~l~~A~~~g~~~~~~~l~~~~~ 401 (437)
T 1n11_A 371 NEVSSDGTTPLAIAKRLGYISVTDVLKVVTD 401 (437)
T ss_dssp CCCCSSSCCHHHHHHHTTCHHHHHHHHHHCC
T ss_pred CCCCCCCCCHHHHHHHcCcHHHHHHHHhccc
Confidence 8888888888888888888888777766543
No 3
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=8.5e-45 Score=360.85 Aligned_cols=285 Identities=32% Similarity=0.410 Sum_probs=248.5
Q ss_pred ChhhhhhcCCHHHHHHHHHcCCCCcccCCC-CCcHHHHHHhcCcHHHHHHHHHccccccccCCCCCcchhHHHhhccccc
Q psy903 1 SLVQACSDGDVKTVKKLLTEGRSVHETTDE-GESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGK 79 (739)
Q Consensus 1 ~L~~A~~~g~~~~v~~ll~~g~~~~~~~~~-g~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~~~ 79 (739)
+|+.||+.|++++|++||++|+++|.++.. |+||||+|+..|+.++|++|+++|++++..+..+. ++++.++..
T Consensus 28 ~L~~Av~~g~~~~V~~LL~~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~-~~~~~~~~~---- 102 (337)
T 4g8k_A 28 LLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGA-TPFILAAIA---- 102 (337)
T ss_dssp HHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCC-CHHHHHHHH----
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCC-chhHHHHhc----
Confidence 589999999999999999999999988754 99999999999999999999999999988877665 766666654
Q ss_pred cccCCCCCCCHHHHHhhhhhhhchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcH
Q psy903 80 LATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESL 159 (739)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~ 159 (739)
+....+..+++.+.+++..+..|.||
T Consensus 103 ------------------------------------------------------~~~~~~~~~~~~~~~~~~~d~~g~t~ 128 (337)
T 4g8k_A 103 ------------------------------------------------------GSVKLLKLFLSKGADVNECDFYGFTA 128 (337)
T ss_dssp ------------------------------------------------------TCHHHHHHHHTTTCCTTCBCTTCCBH
T ss_pred ------------------------------------------------------ccchhhHHhhhccchhhhhccCCCCH
Confidence 46778888889999999999999999
Q ss_pred HHHHHHcCcHHHHHHHHhCCCCccccC---------CCCCCcHHHHHHHcCcHHHHHHHHH-CCCCCCCCCCCCCcHHHH
Q psy903 160 LSLACSAGYYELAQVLLAMHANVEDRG---------IKGECTPLMEAASSGFIEIVRLLIN-HGADVNGQSSSGNTPLMY 229 (739)
Q Consensus 160 L~~A~~~~~~~~v~~Ll~~~~~~~~~~---------~~~~~t~L~~A~~~~~~~~~~~Ll~-~g~~~~~~~~~~~t~L~~ 229 (739)
||+|+..|+.+++++|++.|++++... ...|.||||+|+..|+.+++++|++ .|++++.++..|.|+++.
T Consensus 129 l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~ 208 (337)
T 4g8k_A 129 FMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIH 208 (337)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTTCCCTTSCCHHHH
T ss_pred HHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcCccCCCCCcHHHH
Confidence 999999999999999999998876432 2346799999999999999999995 599999999999999998
Q ss_pred HHhcCc----HHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHc-CCCCcccCcCccCCHHHHHHHcCCHH
Q psy903 230 ACAGGH----EAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEY-GAGINTHSNEFKESALTLACYKGHLD 304 (739)
Q Consensus 230 A~~~~~----~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~-~~~~~~~~~~~~~~~l~~A~~~~~~~ 304 (739)
++..+. ..++++|+++|++++.+|..|.||||+|+..|+.+++++|++. |.+++.. +..|.||||+|+..|+.+
T Consensus 209 ~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~-d~~G~TpL~~A~~~g~~~ 287 (337)
T 4g8k_A 209 ALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDT-DSDGKTALLLAVELKLKK 287 (337)
T ss_dssp HHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCB-CTTSCBHHHHHHHTTCHH
T ss_pred HHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcccCc-CCCCCCHHHHHHHcCCHH
Confidence 876543 4688999999999999999999999999999999999999985 6777764 456999999999999999
Q ss_pred HHHHHHHcCCCCCCCCCcCCcHHHHHHhCCchHHHHHHHHcCCCch
Q psy903 305 MVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSV 350 (739)
Q Consensus 305 ~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~L~~~~~~~~ 350 (739)
+|++|+++|++++.. +||++|+..++.+++++|+++|+++.
T Consensus 288 iv~~Ll~~GAd~n~~-----~~L~~A~~~~~~~iv~~Ll~~GA~~d 328 (337)
T 4g8k_A 288 IAELLCKRGASTDCG-----DLVMTARRNYDHSLVKVLLSHGAKED 328 (337)
T ss_dssp HHHHHHTTSCSSTTC-----CHHHHHHHTTCHHHHHHHHHTTCCC-
T ss_pred HHHHHHHCCCCCCCC-----CHHHHHHHcCCHHHHHHHHHCcCCCC
Confidence 999999999988754 59999999999999999999999865
No 4
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=7.5e-43 Score=346.83 Aligned_cols=92 Identities=28% Similarity=0.396 Sum_probs=76.7
Q ss_pred CCCcHHHHHHHcCcHHHHHHHHHC-CCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCcHHHHHHHcCCHHHH
Q psy903 528 GASTPLMEAAQEGHLELVRYLLDS-GAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDNSTMLIEAAKGGHANVV 606 (739)
Q Consensus 528 ~~~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~d~~g~t~l~~A~~~~~~~iv~~Ll~~~~~~~~~~~l~~A~~~~~~~~v 606 (739)
.|.||||+|+..++.+++++|++. |++++.+|..|+||||+|++.|+.++|++|+++|++++..+||+.|+..|+.++|
T Consensus 238 ~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n~~~~L~~A~~~~~~~iv 317 (337)
T 4g8k_A 238 RGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGDLVMTARRNYDHSLV 317 (337)
T ss_dssp GGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCSSTTCCHHHHHHHTTCHHHH
T ss_pred CCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCHHHHHHHcCCHHHH
Confidence 356888888888888888888875 7888999999999999999999999999999988888888888888888888888
Q ss_pred HHHhhCCCCCCcC
Q psy903 607 QLLLDFPRSVHAK 619 (739)
Q Consensus 607 ~~L~~~~~~~~~~ 619 (739)
++|+++|++++..
T Consensus 318 ~~Ll~~GA~~d~~ 330 (337)
T 4g8k_A 318 KVLLSHGAKEDFH 330 (337)
T ss_dssp HHHHHTTCCC---
T ss_pred HHHHHCcCCCCCC
Confidence 8888888877654
No 5
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=2.4e-42 Score=335.99 Aligned_cols=260 Identities=32% Similarity=0.413 Sum_probs=231.1
Q ss_pred ChhhhhhcCCHHHHHHHHHcCCCCccc-CCCCCcHHHHHHhcCcHHHHHHHHHccccccccCCCCCcchhHHHhhccccc
Q psy903 1 SLVQACSDGDVKTVKKLLTEGRSVHET-TDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGK 79 (739)
Q Consensus 1 ~L~~A~~~g~~~~v~~ll~~g~~~~~~-~~~g~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~~~ 79 (739)
||+.|+..|++++|++|++.|++++.. +..|+||||+|+..|+.+++++|+++|++++..+..+. ||||+|+..
T Consensus 8 ~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~-t~L~~A~~~---- 82 (285)
T 1wdy_A 8 LLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGA-TPFLLAAIA---- 82 (285)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCC-CHHHHHHHH----
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCC-CHHHHHHHc----
Confidence 588999999999999999999999887 77899999999999999999999999999887776654 666666654
Q ss_pred cccCCCCCCCHHHHHhhhhhhhchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcH
Q psy903 80 LATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESL 159 (739)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~ 159 (739)
|+.+++++|++.|++++..+..|.||
T Consensus 83 ------------------------------------------------------~~~~~v~~Ll~~g~~~~~~~~~g~t~ 108 (285)
T 1wdy_A 83 ------------------------------------------------------GSVKLLKLFLSKGADVNECDFYGFTA 108 (285)
T ss_dssp ------------------------------------------------------TCHHHHHHHHHTTCCTTCBCTTCCBH
T ss_pred ------------------------------------------------------CCHHHHHHHHHcCCCCCccCcccCCH
Confidence 47889999999999999999999999
Q ss_pred HHHHHHcCcHHHHHHHHhCCCCccccC---------CCCCCcHHHHHHHcCcHHHHHHHHHC-CCCCCCCCCCCCcHHHH
Q psy903 160 LSLACSAGYYELAQVLLAMHANVEDRG---------IKGECTPLMEAASSGFIEIVRLLINH-GADVNGQSSSGNTPLMY 229 (739)
Q Consensus 160 L~~A~~~~~~~~v~~Ll~~~~~~~~~~---------~~~~~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~~~t~L~~ 229 (739)
||+|+..|+.+++++|++.|++++... ...|.||||+|+..|+.+++++|+++ |++++.++..|.||||+
T Consensus 109 L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~ 188 (285)
T 1wdy_A 109 FMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIH 188 (285)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHH
T ss_pred HHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHH
Confidence 999999999999999999998887653 34567999999999999999999987 99999999999999999
Q ss_pred HHhcCc----HHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHH-cCCCCcccCcCccCCHHHHHHHcCCHH
Q psy903 230 ACAGGH----EAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLE-YGAGINTHSNEFKESALTLACYKGHLD 304 (739)
Q Consensus 230 A~~~~~----~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~-~~~~~~~~~~~~~~~~l~~A~~~~~~~ 304 (739)
|+..++ .+++++|+++|++++.++..|.||||+|+..|+.+++++|++ .|.+++.. +..|.|||++|+..++.+
T Consensus 189 a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~-~~~g~t~l~~A~~~~~~~ 267 (285)
T 1wdy_A 189 ALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDT-DSDGKTALLLAVELKLKK 267 (285)
T ss_dssp HHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCC-CTTSCCHHHHHHHTTCHH
T ss_pred HHHccccchHHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhccCCCcccc-CCCCCcHHHHHHHcCcHH
Confidence 999998 899999999999999999999999999999999999999998 78887764 456899999999999999
Q ss_pred HHHHHHHcCCCCCCCC
Q psy903 305 MVRFLLSAGADQEHKT 320 (739)
Q Consensus 305 ~v~~Ll~~~~~~~~~~ 320 (739)
++++|+++|++++.+|
T Consensus 268 i~~~Ll~~Ga~~~~~d 283 (285)
T 1wdy_A 268 IAELLCKRGASTDCGD 283 (285)
T ss_dssp HHHHHHHHSSCSCCSS
T ss_pred HHHHHHHcCCCCCccc
Confidence 9999999999988776
No 6
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=1.3e-40 Score=334.47 Aligned_cols=320 Identities=29% Similarity=0.351 Sum_probs=182.9
Q ss_pred cHHHHHHHcCcHHHHHHHHHC-CCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChH
Q psy903 192 TPLMEAASSGFIEIVRLLINH-GADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVG 270 (739)
Q Consensus 192 t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ 270 (739)
++|+.|+..|+.+.++.|+.. +.+++.+|..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+
T Consensus 26 ~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~ 105 (351)
T 3utm_A 26 DELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYE 105 (351)
T ss_dssp HHHHHHHHHTCHHHHHHHCCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHH
T ss_pred hhHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHCCCHH
Confidence 556666666665555555543 5555555666666666666666666666666666666666666666666666666666
Q ss_pred HHHHHHHcCCCCcccCcCccCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCcCCcHHHHHHhCCchHHHHHHHHcCCCch
Q psy903 271 VAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSV 350 (739)
Q Consensus 271 ii~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~L~~~~~~~~ 350 (739)
++++|+++|++++.. +..+.||||+|+..|+.+++++|+++|++++..+..+.++++.++..+..+.+.+....
T Consensus 106 iv~~Ll~~g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~----- 179 (351)
T 3utm_A 106 VTELLLKHGACVNAM-DLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKG----- 179 (351)
T ss_dssp HHHHHHHTTCCTTCC-CTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHH-----
T ss_pred HHHHHHHCCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcc-----
Confidence 666666666555543 23355666666666666666666666666666666666777666655555555544431
Q ss_pred hhhcccCCCCCCCCCCCCCcccccchHHHHHHhcCCHHHHHHHHHCCCCCccCCCCCCCHHHHHHHc---CcHHHHHHHH
Q psy903 351 SAYARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSA---GYYELAQVLL 427 (739)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~---~~~~~v~~Ll 427 (739)
.++..++..++.+.++.++..+......+..|.||||.|+.. +..+++++|+
T Consensus 180 -------------------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll 234 (351)
T 3utm_A 180 -------------------------HSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLL 234 (351)
T ss_dssp -------------------------HHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHH
T ss_pred -------------------------cHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHH
Confidence 134455555555555555555443334445555555555555 3344555554
Q ss_pred HcCCCcccccCCCCCcHHHHHHHcCCccchhhHHHhhhccCCCCCCcccccchhhhhhccCccccccCcCCCCCHHHHHH
Q psy903 428 AMHANVEDRGIKGECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIPGAKINAHTEETQETALTLAC 507 (739)
Q Consensus 428 ~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~a~ 507 (739)
+.+++++..
T Consensus 235 ~~g~~~~~~----------------------------------------------------------------------- 243 (351)
T 3utm_A 235 RKGANVNEK----------------------------------------------------------------------- 243 (351)
T ss_dssp HTTCCTTCC-----------------------------------------------------------------------
T ss_pred HcCCCcCCc-----------------------------------------------------------------------
Confidence 444433222
Q ss_pred hcCCHHHHHHHHHcCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCC
Q psy903 508 CGGFLDVADFLLKNGANIELGASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGAN 587 (739)
Q Consensus 508 ~~~~~~~v~~Ll~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~l~~A~~~~~~~iv~~Ll~~~~~ 587 (739)
+..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|
T Consensus 244 ------------------~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~~-------------- 291 (351)
T 3utm_A 244 ------------------NKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALAG-------------- 291 (351)
T ss_dssp ------------------CTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT--------------
T ss_pred ------------------CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcC--------------
Confidence 123456666666666666777777777777666666666666666554
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHhhCCCCCCcCCCCCCcHHHHHHHcCCHHHHHHHHHcCCC--CCCchHHHHHHhCCC
Q psy903 588 LDNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGAN--LDNSTMLIEAAKGGH 663 (739)
Q Consensus 588 ~~~~~~l~~A~~~~~~~~v~~L~~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~--~~~~~~L~~A~~~g~ 663 (739)
+.++|++|+++|++++.+|..|.||+++| +.+++++|.+.+.. ..+.+++..|++.|.
T Consensus 292 --------------~~~~v~~Ll~~gad~~~~~~~g~tal~~a----~~~~~~~l~~~~~~~~~~~~~~l~~A~~~gd 351 (351)
T 3utm_A 292 --------------HLQTCRLLLSYGSDPSIISLQGFTAAQMG----NEAVQQILSESTPMRTSDVDYRLLEASKAGD 351 (351)
T ss_dssp --------------CHHHHHHHHHTTCCTTCCCTTSCCHHHHS----CHHHHHHHHHC--------------------
T ss_pred --------------cHHHHHHHHHcCCCCCCcCCCCCChhhhh----hHHHHHHHHhccccccCcceeehhhhhccCC
Confidence 55556666666777788888899988887 67888888888765 346678888888763
No 7
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=6.7e-41 Score=325.79 Aligned_cols=262 Identities=31% Similarity=0.377 Sum_probs=241.6
Q ss_pred CCCCcHHHHHHhcCcHHHHHHHHHccccccccCCCCCcchhHHHhhccccccccCCCCCCCHHHHHhhhhhhhchHHHHH
Q psy903 29 DEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVSCALDEAA 108 (739)
Q Consensus 29 ~~g~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (739)
.+|+||||.|+..|+.+++++|+++|++++..+...|.||||+|+.
T Consensus 3 ~~g~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~---------------------------------- 48 (285)
T 1wdy_A 3 VEDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQ---------------------------------- 48 (285)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHH----------------------------------
T ss_pred cccchHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCcHHHHHHH----------------------------------
Confidence 4688999999999999999999999999987744444466666554
Q ss_pred HHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCC
Q psy903 109 AALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIK 188 (739)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~ 188 (739)
.|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|+++|++++..+..
T Consensus 49 ------------------------~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~ 104 (285)
T 1wdy_A 49 ------------------------MSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFY 104 (285)
T ss_dssp ------------------------TTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTT
T ss_pred ------------------------cCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCcc
Confidence 45789999999999999999999999999999999999999999999999877655
Q ss_pred CCCcHHHHHHHcCcHHHHHHHHHCCCCCCCC----------CCCCCcHHHHHHhcCcHHHHHHHHHC-CCCCCCCCCCCC
Q psy903 189 GECTPLMEAASSGFIEIVRLLINHGADVNGQ----------SSSGNTPLMYACAGGHEAVVRVLLEC-GANVEDHNENGH 257 (739)
Q Consensus 189 ~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~----------~~~~~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~~~~ 257 (739)
|.||||+|+..|+.+++++|+++|++++.. +..|.||||+|+..|+.+++++|++. |++++..+..|.
T Consensus 105 -g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~ 183 (285)
T 1wdy_A 105 -GFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGR 183 (285)
T ss_dssp -CCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSC
T ss_pred -cCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCC
Confidence 569999999999999999999999999887 78899999999999999999999997 999999999999
Q ss_pred cHHHHHHhcCC----hHHHHHHHHcCCCCcccCcCccCCHHHHHHHcCCHHHHHHHHH-cCCCCCCCCCcCCcHHHHHHh
Q psy903 258 TPLMEAASAGH----VGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLS-AGADQEHKTDEMHTALMEASM 332 (739)
Q Consensus 258 t~L~~A~~~~~----~~ii~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~-~~~~~~~~~~~~~~~l~~a~~ 332 (739)
||||+|+..++ .+++++|+++|.+++.. +..|.||||+|+..|+.+++++|++ .|++++..+..|.|||++|+.
T Consensus 184 t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~ 262 (285)
T 1wdy_A 184 NALIHALLSSDDSDVEAITHLLLDHGADVNVR-GERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVE 262 (285)
T ss_dssp CHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCC-CTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHH
T ss_pred CHHHHHHHccccchHHHHHHHHHHcCCCCCCc-CCCCCcHHHHHHHcCCHHHHHHHHhccCCCccccCCCCCcHHHHHHH
Confidence 99999999999 99999999999998875 4559999999999999999999999 899999999999999999999
Q ss_pred CCchHHHHHHHHcCCCch
Q psy903 333 DGHVEVAKLLLDSGAQSV 350 (739)
Q Consensus 333 ~~~~~~~~~L~~~~~~~~ 350 (739)
.++.+++++|+++|+++.
T Consensus 263 ~~~~~i~~~Ll~~Ga~~~ 280 (285)
T 1wdy_A 263 LKLKKIAELLCKRGASTD 280 (285)
T ss_dssp TTCHHHHHHHHHHSSCSC
T ss_pred cCcHHHHHHHHHcCCCCC
Confidence 999999999999998864
No 8
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=1.2e-40 Score=334.71 Aligned_cols=324 Identities=25% Similarity=0.259 Sum_probs=267.8
Q ss_pred CchHHHHHHHcCCHHHHHHHHhc-CCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcC
Q psy903 123 NERSLVQACSDGDVKTVKKLLTE-GRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSG 201 (739)
Q Consensus 123 ~~~~l~~A~~~~~~~~~~~ll~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~ 201 (739)
+.++|+.|+..|+.+.++.|+.. +.+++..+..|.||||+|+..|+.+++++|++.|++++..+.. |.||||+|+..|
T Consensus 24 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~-g~t~L~~A~~~g 102 (351)
T 3utm_A 24 KKDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKG-GLVPLHNACSYG 102 (351)
T ss_dssp HHHHHHHHHHHTCHHHHHHHCCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT-CCCHHHHHHHTT
T ss_pred cchhHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCC-CCcHHHHHHHCC
Confidence 46889999999999999999976 8899999999999999999999999999999999998877654 579999999999
Q ss_pred cHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCCC
Q psy903 202 FIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAG 281 (739)
Q Consensus 202 ~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~~ 281 (739)
+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++..+..|.+|++.|+..+..+.+.+....
T Consensus 103 ~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~--- 179 (351)
T 3utm_A 103 HYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKG--- 179 (351)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHH---
T ss_pred CHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcc---
Confidence 99999999999999999999999999999999999999999999999999999999999999988888888877643
Q ss_pred CcccCcCccCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCcCCcHHHHHHhCCchHHHHHHHHcCCCchhhhcccCCCCC
Q psy903 282 INTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPN 361 (739)
Q Consensus 282 ~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~ 361 (739)
.++..++..++.+.++.++..+......+..+.+||++|+..++.
T Consensus 180 ----------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~------------------------- 224 (351)
T 3utm_A 180 ----------HSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHP------------------------- 224 (351)
T ss_dssp ----------HHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCST-------------------------
T ss_pred ----------cHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCc-------------------------
Confidence 578888899999999999888776666777888999998887432
Q ss_pred CCCCCCCCcccccchHHHHHHhcCCHHHHHHHHHCCCCCccCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCcccccCCCC
Q psy903 362 DKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGE 441 (739)
Q Consensus 362 ~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~ 441 (739)
+..+++++|++.|.+++..+..|.||||+|+..++.+++++|+++|++++..+
T Consensus 225 -----------------------~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d---- 277 (351)
T 3utm_A 225 -----------------------KRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALD---- 277 (351)
T ss_dssp -----------------------THHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC----
T ss_pred -----------------------cHHHHHHHHHHcCCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcC----
Confidence 11244455555666677888999999999999999999999999887765443
Q ss_pred CcHHHHHHHcCCccchhhHHHhhhccCCCCCCcccccchhhhhhccCccccccCcCCCCCHHHHHHhcCCHHHHHHHHHc
Q psy903 442 CTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIPGAKINAHTEETQETALTLACCGGFLDVADFLLKN 521 (739)
Q Consensus 442 ~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ll~~ 521 (739)
T Consensus 278 -------------------------------------------------------------------------------- 277 (351)
T 3utm_A 278 -------------------------------------------------------------------------------- 277 (351)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCC--CCCcHHHHHHH
Q psy903 522 GANIELGASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANL--DNSTMLIEAAK 599 (739)
Q Consensus 522 ~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~l~~A~~~~~~~iv~~Ll~~~~~~--~~~~~l~~A~~ 599 (739)
..|.||||+|+..|+.+++++|+++|++++.+|..|.||+++| ..+++++|.+.+... +..+++..|++
T Consensus 278 -----~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~tal~~a----~~~~~~~l~~~~~~~~~~~~~~l~~A~~ 348 (351)
T 3utm_A 278 -----SLGQTALHRAALAGHLQTCRLLLSYGSDPSIISLQGFTAAQMG----NEAVQQILSESTPMRTSDVDYRLLEASK 348 (351)
T ss_dssp -----TTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHS----CHHHHHHHHHC-----------------
T ss_pred -----CCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCChhhhh----hHHHHHHHHhccccccCcceeehhhhhc
Confidence 2367899999999999999999999999999999999999997 567888888776543 34556666665
Q ss_pred cC
Q psy903 600 GG 601 (739)
Q Consensus 600 ~~ 601 (739)
.|
T Consensus 349 ~g 350 (351)
T 3utm_A 349 AG 350 (351)
T ss_dssp --
T ss_pred cC
Confidence 54
No 9
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=5.5e-40 Score=316.04 Aligned_cols=252 Identities=25% Similarity=0.326 Sum_probs=199.1
Q ss_pred ChhhhhhcCCHHHHHHHHHcC-----------CCCcccCCCCCcHHHHHHhcCcHHHHHHHHHccccccccCCCCCcchh
Q psy903 1 SLVQACSDGDVKTVKKLLTEG-----------RSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPL 69 (739)
Q Consensus 1 ~L~~A~~~g~~~~v~~ll~~g-----------~~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l 69 (739)
+||.|+..|+.+.+..++..+ ..++..|..|+||||+|+..|+.+++++|++.|++++..+..|. |||
T Consensus 18 ~lH~Aa~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~-t~L 96 (285)
T 3d9h_A 18 GSHMASMDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHV-SPL 96 (285)
T ss_dssp ------------------------CCSEECCCCTTCSSSCCSCCHHHHHHHTTCHHHHHHHHHTTCCSCEECTTCC-CHH
T ss_pred HHHHHhhcCCCCCcccCCCCccccccchhhhhCcccCCCccCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCC-CHH
Confidence 589999999988888876643 23567889999999999999999999999999999988877665 776
Q ss_pred HHHhhccccccccCCCCCCCHHHHHhhhhhhhchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCC
Q psy903 70 MEAASSGFGKLATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSV 149 (739)
Q Consensus 70 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~ 149 (739)
|+|+.. |+.+++++|++.|+++
T Consensus 97 ~~A~~~----------------------------------------------------------g~~~~v~~Ll~~ga~~ 118 (285)
T 3d9h_A 97 HEACLG----------------------------------------------------------GHLSCVKILLKHGAQV 118 (285)
T ss_dssp HHHHHT----------------------------------------------------------TCHHHHHHHHHTTCCS
T ss_pred HHHHHC----------------------------------------------------------CcHHHHHHHHHCCCCC
Confidence 666654 4789999999999999
Q ss_pred CcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHH
Q psy903 150 HETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMY 229 (739)
Q Consensus 150 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~ 229 (739)
+..+..|.||||+|+..|+.+++++|++.|++++.... |.||||+|+..|+.+++++|+++|++++.+|..|.||||+
T Consensus 119 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~--g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~ 196 (285)
T 3d9h_A 119 NGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPESD--LASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYL 196 (285)
T ss_dssp SCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCSCT--TSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHH
T ss_pred CCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCCCCC--CCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHH
Confidence 99999999999999999999999999999998875433 6799999999999999999999999999999999999999
Q ss_pred HHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCCCCcccCcCccCCHHHHHHHcCCHHHHHHH
Q psy903 230 ACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFL 309 (739)
Q Consensus 230 A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~L 309 (739)
|+..|+.+++++|+++|++++. +..|.||||+|+..++.+++++|+++|++++.. +..|.|||++|+ ++.+++++|
T Consensus 197 A~~~~~~~~v~~Ll~~ga~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~-d~~g~t~l~~A~--~~~~~~~~L 272 (285)
T 3d9h_A 197 ACENQQRACVKKLLESGADVNQ-GKGQDSPLHAVVRTASEELACLLMDFGADTQAK-NAEGKRPVELVP--PESPLAQLF 272 (285)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTC-CBTTBCHHHHHHHTTCHHHHHHHHHTTCCTTCC-CTTSCCGGGGSC--TTSHHHHHH
T ss_pred HHHcCcHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCc-CCCCCCHHHHhc--CccHHHHHH
Confidence 9999999999999999999884 888999999999999999999999999888764 445889999988 456889999
Q ss_pred HHc-CCCCC
Q psy903 310 LSA-GADQE 317 (739)
Q Consensus 310 l~~-~~~~~ 317 (739)
+++ |+++.
T Consensus 273 l~~~~a~l~ 281 (285)
T 3d9h_A 273 LEREGASLP 281 (285)
T ss_dssp HHHC-----
T ss_pred HHhhccCCC
Confidence 887 65554
No 10
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=2.4e-40 Score=331.89 Aligned_cols=308 Identities=19% Similarity=0.229 Sum_probs=217.1
Q ss_pred ChhhhhhcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHHccccccccCCCCCcchhHHHhhcccccc
Q psy903 1 SLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKL 80 (739)
Q Consensus 1 ~L~~A~~~g~~~~v~~ll~~g~~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~~~~ 80 (739)
||+.|+..|+.+.++.+++....+. .-++++.-+...|+++++++++....+ ..+ .||||.|+..+. ++
T Consensus 40 ~l~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~-----~~g-~t~L~~Aa~~~~-~~ 108 (373)
T 2fo1_E 40 SLLEASYDGYIKRQRNELQHYSLYP----NPQGYGNGNDFLGDFNHTNLQIPTEPE-----PES-PIKLHTEAAGSY-AI 108 (373)
T ss_dssp ---------------------------------------------------------------C-CCHHHHHHHSSS-CC
T ss_pred ccccccCCccccchhhhhhhhcccc----CccccCCCCCccccccccccccccCCC-----CCC-ccHHHHHhcCCc-hH
Confidence 5778888889898888887655443 223456667777888888777665432 233 488888877553 33
Q ss_pred ccCCCCCCCHHHHHhhhhhhhchHHHHHHHHHhhhcCCCC-CCCchHHHHHHHcCCHHHHHHHH--------hcCCCCCc
Q psy903 81 ATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPR-PQNERSLVQACSDGDVKTVKKLL--------TEGRSVHE 151 (739)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~A~~~~~~~~~~~ll--------~~~~~~~~ 151 (739)
+..+.. . .....+ ..+.|+||.|+..|+.+++++|+ +.|++++.
T Consensus 109 ~~~L~~------------~---------------~~n~~d~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~ 161 (373)
T 2fo1_E 109 TEPITR------------E---------------SVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNA 161 (373)
T ss_dssp CSCCST------------T---------------TTTTCCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTC
T ss_pred HHHhcc------------c---------------cccccCCcCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcC
Confidence 221111 0 001122 45678888888888877666665 89999999
Q ss_pred CCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCC---CCCCCCCCCCCcHHH
Q psy903 152 TTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHG---ADVNGQSSSGNTPLM 228 (739)
Q Consensus 152 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g---~~~~~~~~~~~t~L~ 228 (739)
.|..|.||||+|+..|+.++|++|+++|++++..+.. |.||||+|+..|+.+++++|++++ ++++..+..|.||||
T Consensus 162 ~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~-g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~ 240 (373)
T 2fo1_E 162 MDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKS-ERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALM 240 (373)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTT-CCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHH
T ss_pred CCCCCCCHHHHHHHcChHHHHHHHHHCCCCCcccCCC-CCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHH
Confidence 9999999999999999999999999999999877654 569999999999999999999988 899999999999999
Q ss_pred HHHhcC---cHHHHHHHHHCCCCCCC--------CCCCCCcHHHHHHhcCChHHHHHHHHcC-CCCcccCcCccCCHHHH
Q psy903 229 YACAGG---HEAVVRVLLECGANVED--------HNENGHTPLMEAASAGHVGVAKILLEYG-AGINTHSNEFKESALTL 296 (739)
Q Consensus 229 ~A~~~~---~~~~v~~Ll~~~~~~~~--------~~~~~~t~L~~A~~~~~~~ii~~Ll~~~-~~~~~~~~~~~~~~l~~ 296 (739)
+|+..+ +.+++++|+++|++++. .+..|.||||+|+..|+.+++++|++++ .+++.. +..|.||||+
T Consensus 241 ~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~-d~~g~TpL~~ 319 (373)
T 2fo1_E 241 IVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQ-DEDGKTPIML 319 (373)
T ss_dssp HHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCC-CTTCCCHHHH
T ss_pred HHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCc-CCCCCCHHHH
Confidence 999998 89999999999999876 5778999999999999999999999886 777664 5569999999
Q ss_pred HHHcCCHHHHHHHHHcCCCCCCCCCcCCcHHHHHHhCCchHHHHHHHHcCCC
Q psy903 297 ACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQ 348 (739)
Q Consensus 297 A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~L~~~~~~ 348 (739)
|+..|+.+++++|+++|++++..+..|.|||++|+..|+.+++++|++++++
T Consensus 320 A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~l~~A~~~g~~~iv~~Ll~~~a~ 371 (373)
T 2fo1_E 320 AAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFDRCRPE 371 (373)
T ss_dssp HHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHHHHTTCHHHHHHHHTTC--
T ss_pred HHHcCCHHHHHHHHHcCCCccCCCCCCCCHHHHHHHcCCHHHHHHHHhcCcc
Confidence 9999999999999999999999999999999999999999999999998764
No 11
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=2e-39 Score=307.07 Aligned_cols=231 Identities=27% Similarity=0.296 Sum_probs=145.3
Q ss_pred CCCcccCCCCCcHHHHHHhcC-------------cHHHHHHHHHccccccccCCCCCcchhHHHhhccccccccCCCCCC
Q psy903 22 RSVHETTDEGESLLSLACSAG-------------YYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKLATGDGKLA 88 (739)
Q Consensus 22 ~~~~~~~~~g~t~L~~A~~~~-------------~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~ 88 (739)
.++|.+|.+|+||||+|+..| +.+++++|+++|++++...+..|.||||+|+.
T Consensus 1 ~dvn~~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~-------------- 66 (253)
T 1yyh_A 1 MDVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAAR-------------- 66 (253)
T ss_dssp ---------------------------------------------------CCCTTSCCHHHHHHH--------------
T ss_pred CCCCCCCCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcccccCCCCCcHHHHHHH--------------
Confidence 367889999999999999988 78888888888887765433333355555544
Q ss_pred CHHHHHhhhhhhhchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCc
Q psy903 89 DPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGY 168 (739)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~ 168 (739)
.|+.+++++|++.|++++..+..|.||||+|+..|+
T Consensus 67 --------------------------------------------~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 102 (253)
T 1yyh_A 67 --------------------------------------------YSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADA 102 (253)
T ss_dssp --------------------------------------------TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred --------------------------------------------cCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCC
Confidence 446778888888888888888888888888888888
Q ss_pred HHHHHHHHhCCC-CccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCC
Q psy903 169 YELAQVLLAMHA-NVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGA 247 (739)
Q Consensus 169 ~~~v~~Ll~~~~-~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~ 247 (739)
.+++++|++.++ +++.. +..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|+
T Consensus 103 ~~~v~~Ll~~~~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga 181 (253)
T 1yyh_A 103 QGVFQILIRNRATDLDAR-MHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGA 181 (253)
T ss_dssp HHHHHHHHHSTTSCTTCC-CTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTC
T ss_pred HHHHHHHHHcCCCCcccc-CCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 888888888876 44433 3445688888888888888888888888888888888888888888888888888888888
Q ss_pred CCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCCCCcccCcCccCCHHHHHHHcCCHHHHHHHHHc
Q psy903 248 NVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSA 312 (739)
Q Consensus 248 ~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~ 312 (739)
+++.+|..|.||||+|+..|+.+++++|+++|++++.. +..|.||+++|+..|+.+++++|...
T Consensus 182 ~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~-d~~g~tpl~~A~~~g~~~i~~~l~~~ 245 (253)
T 1yyh_A 182 NKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDIT-DHMDRLPRDIAQERMHHDIVRLLDLE 245 (253)
T ss_dssp CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCC-CTTCCCHHHHHHHTTCHHHHHHHHC-
T ss_pred CCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccc-ccCCCCHHHHHHHcCCHHHHHHHHHH
Confidence 88888888888888888888888888888888777654 44577888888888888888877754
No 12
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=3.1e-39 Score=307.14 Aligned_cols=250 Identities=25% Similarity=0.289 Sum_probs=168.1
Q ss_pred CCCcHHHHHHhcCcHHHHHHHHHccccccccCCCCCcchhHHHhhccccccccCCCCCCCHHHHHhhhhhhhchHHHHHH
Q psy903 30 EGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVSCALDEAAA 109 (739)
Q Consensus 30 ~g~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (739)
+|+||||+|+..|+.+++++|+++|++++..+..+. ||||+|+..
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~-t~L~~A~~~---------------------------------- 46 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHV-SPLHEACLG---------------------------------- 46 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCC-CHHHHHHHH----------------------------------
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCC-CHHHHHHHc----------------------------------
Confidence 466777777777777777777777777666655443 555554443
Q ss_pred HHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCC
Q psy903 110 ALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKG 189 (739)
Q Consensus 110 ~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~ 189 (739)
|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|++.|++++... .
T Consensus 47 ------------------------g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~--~ 100 (261)
T 2xai_A 47 ------------------------GHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPES--D 100 (261)
T ss_dssp ------------------------TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCSC--T
T ss_pred ------------------------CCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCC--C
Confidence 35667777777777777777777777777777777777777777776665432 2
Q ss_pred CCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCCh
Q psy903 190 ECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHV 269 (739)
Q Consensus 190 ~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~ 269 (739)
|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++. +..|.||||+|+..++.
T Consensus 101 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~g~t~Lh~A~~~~~~ 179 (261)
T 2xai_A 101 LASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-GKGQDSPLHAVARTASE 179 (261)
T ss_dssp TCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCCTTC-CBTTBCHHHHHHHHTCH
T ss_pred CCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCC-CCCCCChHHHHHHcCCH
Confidence 45777777777777777777777777777777777777777777777777777777777664 66677777777777777
Q ss_pred HHHHHHHHcCCCCcccCcCccCCHHHHHHHcCCHHHHHHHHHcCCCC--------CCCCCcCCcHHHHHHhCCchHHHHH
Q psy903 270 GVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQ--------EHKTDEMHTALMEASMDGHVEVAKL 341 (739)
Q Consensus 270 ~ii~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~--------~~~~~~~~~~l~~a~~~~~~~~~~~ 341 (739)
+++++|+++|++++.. +..|.||+++|+..+ +++++|++++... ..++..|.++++.+.....++.++.
T Consensus 180 ~~v~~Ll~~gad~~~~-d~~g~tpl~~A~~~~--~~~~~ll~~~~~~~l~~~~~~~~r~~~g~t~l~~~~~~~~p~~l~~ 256 (261)
T 2xai_A 180 ELACLLMDFGADTQAK-NAEGKRPVELVPPES--PLAQLFLEREGPPSLMQLCRLRIRKCFGIQQHHKITKLVLPEDLKQ 256 (261)
T ss_dssp HHHHHHHHTTCCTTCC-CTTSCCGGGGSCTTC--THHHHHHHC-CCCCHHHHHHHHHHTTSCTTCGGGGGGSSSCHHHHH
T ss_pred HHHHHHHHcCCCCCCc-CCCCCChhhhccccc--cHHHHHHhccCCccHHHHHHHHHHHHhchhccccCcccCCcHHHHH
Confidence 7777777777776653 344777777776443 4667777665432 3556778888888888777777666
Q ss_pred HHH
Q psy903 342 LLD 344 (739)
Q Consensus 342 L~~ 344 (739)
++.
T Consensus 257 ~l~ 259 (261)
T 2xai_A 257 FLL 259 (261)
T ss_dssp HHT
T ss_pred HHh
Confidence 553
No 13
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=6.5e-39 Score=308.58 Aligned_cols=267 Identities=24% Similarity=0.268 Sum_probs=207.9
Q ss_pred CCCCCcHHHHHHhcCcHHHHHHHHHccccccccCCCCCcchhHHHhhccccccccCCCCCCCHHHHHhhhhhhhchHHHH
Q psy903 28 TDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVSCALDEA 107 (739)
Q Consensus 28 ~~~g~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (739)
...|+|+||+|+..|+.+.+..++..+.+-... ..+ ...
T Consensus 12 ~~~~~~~lH~Aa~~g~~~~~~~~~~~~~~~~~~------~~l---~~~-------------------------------- 50 (285)
T 3d9h_A 12 SGLVPRGSHMASMDGKQGGMDGSKPAGPRDFPG------IRL---LSN-------------------------------- 50 (285)
T ss_dssp ------------------------------CCS------EEC---CCC--------------------------------
T ss_pred chHHHHHHHHHhhcCCCCCcccCCCCccccccc------hhh---hhC--------------------------------
Confidence 457999999999999988888887765431100 000 000
Q ss_pred HHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCC
Q psy903 108 AAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGI 187 (739)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~ 187 (739)
........+.|+|+.|+..|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|++.|++++..+.
T Consensus 51 -------~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~ 123 (285)
T 3d9h_A 51 -------PLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTA 123 (285)
T ss_dssp -------TTCSSSCCSCCHHHHHHHTTCHHHHHHHHHTTCCSCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCT
T ss_pred -------cccCCCccCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCC
Confidence 0012345567888888889999999999999999999999999999999999999999999999999987765
Q ss_pred CCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcC
Q psy903 188 KGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAG 267 (739)
Q Consensus 188 ~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~ 267 (739)
. |.||||+|+..|+.+++++|+++|++++..+ .|.||||+|+..|+.+++++|+++|++++..|..|.||||+|+..|
T Consensus 124 ~-g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~ 201 (285)
T 3d9h_A 124 D-WHTPLFNACVSGSWDCVNLLLQHGASVQPES-DLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQ 201 (285)
T ss_dssp T-CCCHHHHHHHHTCHHHHHHHHHTTCCSSCSC-TTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTT
T ss_pred C-CCCHHHHHHHcCHHHHHHHHHHCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcC
Confidence 5 4699999999999999999999999998654 5999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHcCCCCcccCcCccCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCcCCcHHHHHHhCCchHHHHHHHHc-C
Q psy903 268 HVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDS-G 346 (739)
Q Consensus 268 ~~~ii~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~L~~~-~ 346 (739)
+.+++++|+++|++++. +..|.||||+|+..++.+++++|++.|++++.++..|.|||++|+ ++.+++++|+++ +
T Consensus 202 ~~~~v~~Ll~~ga~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~--~~~~~~~~Ll~~~~ 277 (285)
T 3d9h_A 202 QRACVKKLLESGADVNQ--GKGQDSPLHAVVRTASEELACLLMDFGADTQAKNAEGKRPVELVP--PESPLAQLFLEREG 277 (285)
T ss_dssp CHHHHHHHHHTTCCTTC--CBTTBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSC--TTSHHHHHHHHHC-
T ss_pred cHHHHHHHHHCCCCCCC--CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHhc--CccHHHHHHHHhhc
Confidence 99999999999999884 566999999999999999999999999999999999999999998 567999999998 4
Q ss_pred CC
Q psy903 347 AQ 348 (739)
Q Consensus 347 ~~ 348 (739)
++
T Consensus 278 a~ 279 (285)
T 3d9h_A 278 AS 279 (285)
T ss_dssp --
T ss_pred cC
Confidence 44
No 14
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=3.6e-39 Score=306.70 Aligned_cols=247 Identities=24% Similarity=0.290 Sum_probs=212.0
Q ss_pred ChhhhhhcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHHccccccccCCCCCcchhHHHhhcccccc
Q psy903 1 SLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKL 80 (739)
Q Consensus 1 ~L~~A~~~g~~~~v~~ll~~g~~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~~~~ 80 (739)
|||.|+..|+.++|++|++.|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..+. ||||+|+..|
T Consensus 6 ~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~-t~L~~A~~~~---- 80 (261)
T 2xai_A 6 PMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWH-TPLFNACVSG---- 80 (261)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSC-CHHHHHHHHT----
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCC-CHHHHHHHcC----
Confidence 69999999999999999999999999999999999999999999999999999999998887665 7777766554
Q ss_pred ccCCCCCCCHHHHHhhhhhhhchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHH
Q psy903 81 ATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLL 160 (739)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L 160 (739)
+.+++++|++.|++++. +..|.|||
T Consensus 81 ------------------------------------------------------~~~~v~~Ll~~g~~~~~-~~~g~t~L 105 (261)
T 2xai_A 81 ------------------------------------------------------SWDCVNLLLQHGASVQP-ESDLASPI 105 (261)
T ss_dssp ------------------------------------------------------CHHHHHHHHHTTCCSSC-SCTTCCHH
T ss_pred ------------------------------------------------------CHHHHHHHHHCCCCCCC-CCCCCCHH
Confidence 78889999999988875 44588999
Q ss_pred HHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHH
Q psy903 161 SLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVR 240 (739)
Q Consensus 161 ~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~ 240 (739)
|+|+..|+.+++++|++.|++++..+..+ .||||+|+..|+.+++++|+++|++++. +..|.||||+|+..|+.++++
T Consensus 106 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g-~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~g~t~Lh~A~~~~~~~~v~ 183 (261)
T 2xai_A 106 HEAARRGHVECVNSLIAYGGNIDHKISHL-GTPLYLACENQQRACVKKLLESGADVNQ-GKGQDSPLHAVARTASEELAC 183 (261)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCBTTT-BCHHHHHHHTTCHHHHHHHHHHTCCTTC-CBTTBCHHHHHHHHTCHHHHH
T ss_pred HHHHHcCcHHHHHHHHHcCCCCCcCCCCC-CCHHHHHHHhCCHHHHHHHHHcCCCCCC-CCCCCChHHHHHHcCCHHHHH
Confidence 99999999999999999999888776554 5999999999999999999999999985 788899999999999999999
Q ss_pred HHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCCCCcc-------cCcCccCCHHHHHHHcCCHHHHHHHHH
Q psy903 241 VLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINT-------HSNEFKESALTLACYKGHLDMVRFLLS 311 (739)
Q Consensus 241 ~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~~~~~-------~~~~~~~~~l~~A~~~~~~~~v~~Ll~ 311 (739)
+|+++|++++.+|..|.|||++|+..+ +++++|++++..... ..+..|.|++|.+.+....+.++.++.
T Consensus 184 ~Ll~~gad~~~~d~~g~tpl~~A~~~~--~~~~~ll~~~~~~~l~~~~~~~~r~~~g~t~l~~~~~~~~p~~l~~~l~ 259 (261)
T 2xai_A 184 LLMDFGADTQAKNAEGKRPVELVPPES--PLAQLFLEREGPPSLMQLCRLRIRKCFGIQQHHKITKLVLPEDLKQFLL 259 (261)
T ss_dssp HHHHTTCCTTCCCTTSCCGGGGSCTTC--THHHHHHHC-CCCCHHHHHHHHHHTTSCTTCGGGGGGSSSCHHHHHHHT
T ss_pred HHHHcCCCCCCcCCCCCChhhhccccc--cHHHHHHhccCCccHHHHHHHHHHHHhchhccccCcccCCcHHHHHHHh
Confidence 999999999999999999999998554 588899888765421 124568899999988887777776653
No 15
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=2e-39 Score=326.05 Aligned_cols=262 Identities=19% Similarity=0.185 Sum_probs=197.2
Q ss_pred CcccCCCCCcHHHHHHhcCcHHHHHHHHHccccccccCCCCCcchhHHHhhccccccccCCCCCCCHHHHHhhhhhhhch
Q psy903 24 VHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVSCA 103 (739)
Q Consensus 24 ~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (739)
.+..|.+|+||||+|+..|+.++|++|+++|++++..+..+. ||||+|+..| +.++++.|.....
T Consensus 13 ~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~-t~L~~A~~~g------------~~~~v~~Ll~~g~-- 77 (364)
T 3ljn_A 13 RIKSDDENMEKIHVAARKGQTDEVRRLIETGVSPTIQNRFGC-TALHLACKFG------------CVDTAKYLASVGE-- 77 (364)
T ss_dssp ---CCHHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCC-CHHHHHHHHC------------CHHHHHHHHHHCC--
T ss_pred ccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCC-cHHHHHHHcC------------CHHHHHHHHHCCC--
Confidence 344455555555555555555555555555555555554443 5555555555 4444444443322
Q ss_pred HHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhc----CCCCCc-----------------CCCCCCcHHHH
Q psy903 104 LDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTE----GRSVHE-----------------TTDEGESLLSL 162 (739)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~----~~~~~~-----------------~~~~g~t~L~~ 162 (739)
......+.|+|+.|+..|+.+++++|++. |.+++. .+..|.||||+
T Consensus 78 -------------~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~ 144 (364)
T 3ljn_A 78 -------------VHSLWHGQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHW 144 (364)
T ss_dssp -------------CCCCBTTBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHH
T ss_pred -------------CccccCCCCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHH
Confidence 11112456677777777788888888887 777666 88899999999
Q ss_pred HHHcC--cHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCC-----CCCCCCCCCcHHHHHHhcCc
Q psy903 163 ACSAG--YYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGAD-----VNGQSSSGNTPLMYACAGGH 235 (739)
Q Consensus 163 A~~~~--~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~-----~~~~~~~~~t~L~~A~~~~~ 235 (739)
|+..| +.+++++|++.|++++..+.. |.||||+|+..|+.+++++|+++|++ ++.++..|.||||+|+..|+
T Consensus 145 A~~~g~~~~~~v~~Ll~~ga~~~~~d~~-g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~ 223 (364)
T 3ljn_A 145 CVGLGPEYLEMIKILVQLGASPTAKDKA-DETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINW 223 (364)
T ss_dssp HHHSCGGGHHHHHHHHHHTCCTTCCCTT-SCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTC
T ss_pred HHHcCCchHHHHHHHHHcCCCCcccCCC-CCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCC
Confidence 99999 999999999999999877654 56999999999999999999999998 99999999999999999999
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCCCCccc-----------CcCccCCHHHHHHHcCCHH
Q psy903 236 EAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTH-----------SNEFKESALTLACYKGHLD 304 (739)
Q Consensus 236 ~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~~~~~~-----------~~~~~~~~l~~A~~~~~~~ 304 (739)
.+++++|+++|++++..|..|.|||++|+..|+.+++++|+++|++.... .+..+.++++.|+..++.+
T Consensus 224 ~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aa~~~~~~ 303 (364)
T 3ljn_A 224 EDVAMRFVEMGIDVNMEDNEHTVPLYLSVRAAMVLLTKELLQKTDVFLIQACPYHNGTTVLPDRVVWLDFVPAAADPSKQ 303 (364)
T ss_dssp HHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTCCHHHHHHHHHHSCHHHHHTCTTBSSSSBCGGGCCCCTTSCSSCCHHHH
T ss_pred HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHHcCCchhhhcCcccCcccccccccccccchhhhhccCHH
Confidence 99999999999999999999999999999999999999999987654221 2334567777777777666
Q ss_pred HHHHHHHcCC
Q psy903 305 MVRFLLSAGA 314 (739)
Q Consensus 305 ~v~~Ll~~~~ 314 (739)
.+..|+..+.
T Consensus 304 ~v~~ll~~~~ 313 (364)
T 3ljn_A 304 EVLQLLQEKL 313 (364)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 6666665543
No 16
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=4.5e-39 Score=323.40 Aligned_cols=230 Identities=21% Similarity=0.223 Sum_probs=115.6
Q ss_pred ccccccCCCCCcchhHHHhhccccccccCCCCCCCHHHHHhhhhhhhchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcC
Q psy903 55 ANVEDRGIKGECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDG 134 (739)
Q Consensus 55 a~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~ 134 (739)
.+.+..|..+. ||||+|+..| +.++++.+.+.... .......+.|+|+.|+..|
T Consensus 11 ~~~~~~d~~g~-t~L~~Aa~~g------------~~~~v~~Ll~~g~~-------------~~~~d~~g~t~L~~A~~~g 64 (364)
T 3ljn_A 11 LNRIKSDDENM-EKIHVAARKG------------QTDEVRRLIETGVS-------------PTIQNRFGCTALHLACKFG 64 (364)
T ss_dssp -----CCHHHH-HHHHHHHHHT------------CHHHHHHHHHTTCC-------------TTCCCTTCCCHHHHHHHHC
T ss_pred CCccccCCCCC-CHHHHHHHcC------------CHHHHHHHHHcCCC-------------ccccCCCCCcHHHHHHHcC
Confidence 34555666665 9999999888 44444444433211 1122334455555555555
Q ss_pred CHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhC----CCCccc-----------------cCCCCCCcH
Q psy903 135 DVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAM----HANVED-----------------RGIKGECTP 193 (739)
Q Consensus 135 ~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~----~~~~~~-----------------~~~~~~~t~ 193 (739)
+.+++++|++.|++++. ..|.||||+|+..|+.+++++|++. +.+++. .+ ..|.||
T Consensus 65 ~~~~v~~Ll~~g~~~~~--~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~t~ 141 (364)
T 3ljn_A 65 CVDTAKYLASVGEVHSL--WHGQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKH-CKGQTA 141 (364)
T ss_dssp CHHHHHHHHHHCCCCCC--BTTBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEE-ESCCCH
T ss_pred CHHHHHHHHHCCCCccc--cCCCCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCC-CCCCCH
Confidence 55555555555543322 2445555555555555555555554 443332 11 223355
Q ss_pred HHHHHHcC--cHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCC-----CCCCCCCCCcHHHHHHhc
Q psy903 194 LMEAASSG--FIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGAN-----VEDHNENGHTPLMEAASA 266 (739)
Q Consensus 194 L~~A~~~~--~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~-----~~~~~~~~~t~L~~A~~~ 266 (739)
||+|+..| +.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++ ++..|..|.||||+|+..
T Consensus 142 L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~ 221 (364)
T 3ljn_A 142 LHWCVGLGPEYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILI 221 (364)
T ss_dssp HHHHHHSCGGGHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTT
T ss_pred HHHHHHcCCchHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHc
Confidence 55555555 55555555555555555555555555555555555555555555544 555555555555555555
Q ss_pred CChHHHHHHHHcCCCCcccCcCccCCHHHHHHHcCCHHHHHHHHHcCC
Q psy903 267 GHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGA 314 (739)
Q Consensus 267 ~~~~ii~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~ 314 (739)
|+.+++++|+++|++++.. +..|.|||++|+..|+.+++++|+++|+
T Consensus 222 g~~~~v~~Ll~~gad~~~~-d~~g~tpL~~A~~~g~~~~v~~Ll~~~~ 268 (364)
T 3ljn_A 222 NWEDVAMRFVEMGIDVNME-DNEHTVPLYLSVRAAMVLLTKELLQKTD 268 (364)
T ss_dssp TCHHHHHHHHTTTCCTTCC-CTTSCCHHHHHHHTCCHHHHHHHHHHSC
T ss_pred CCHHHHHHHHHcCCCCCCC-CCCCCCHHHHHHHhChHHHHHHHHHcCC
Confidence 5555555555555554432 2335555555555555555555555543
No 17
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=1e-38 Score=306.95 Aligned_cols=248 Identities=17% Similarity=0.169 Sum_probs=221.5
Q ss_pred hhhhcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHHccccccccCCCCCcchhHHHhhccccccccC
Q psy903 4 QACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKLATG 83 (739)
Q Consensus 4 ~A~~~g~~~~v~~ll~~g~~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~~~~~~~ 83 (739)
.++...+.+.|..||..+ +++.+|..|+||||+|+..|+.++|++|+++|++++..+ |.||||+|+..|
T Consensus 5 s~i~~~~~~~v~~lL~~~-~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~---g~t~L~~A~~~g------- 73 (285)
T 3kea_A 5 SRINTWKSKQLKSFLSSK-DTFKADVHGHSASYYAIADNNVRLVCTLLNAGALKNLLE---NEFPLHQAATLE------- 73 (285)
T ss_dssp TTGGGCCHHHHHHHHHST-TTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGGSCCT---TCCHHHHHTTSS-------
T ss_pred HHHHhcCHHHHHHHHHhC-CCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCC---CCCHHHHHHHcC-------
Confidence 457788888888888875 789999999999999999999999999999999998774 347777777655
Q ss_pred CCCCCCHHHHHhhhhhhhchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHH
Q psy903 84 DGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLA 163 (739)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A 163 (739)
+.+++++|++.|++++..+..|.||||+|
T Consensus 74 ---------------------------------------------------~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A 102 (285)
T 3kea_A 74 ---------------------------------------------------DTKIVKILLFSGLDDSQFDDKGNTALYYA 102 (285)
T ss_dssp ---------------------------------------------------SCHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred ---------------------------------------------------CHHHHHHHHHCCCCCCCcCCCCCcHHHHH
Confidence 68899999999999999999999999999
Q ss_pred HHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHH
Q psy903 164 CSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLL 243 (739)
Q Consensus 164 ~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll 243 (739)
+..|+.+++++|+++|++++..+..++.||||+|+..|+.+++++|+++|++.... ..|.||||+|+..|+.+++++|+
T Consensus 103 ~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll 181 (285)
T 3kea_A 103 VDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDL-AILLSCIHITIKNGHVDMMILLL 181 (285)
T ss_dssp HHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCC-STHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccc-cCCccHHHHHHHcChHHHHHHHH
Confidence 99999999999999999998877666469999999999999999999999877322 28899999999999999999999
Q ss_pred HCCCCCCCCCCCCCcH-HHHHHhcCChHHHHHHHHcCCCCcccCcCccCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCc
Q psy903 244 ECGANVEDHNENGHTP-LMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDE 322 (739)
Q Consensus 244 ~~~~~~~~~~~~~~t~-L~~A~~~~~~~ii~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~ 322 (739)
++|++++.++..|.|| ||+|+..|+.+++++|+++|++++... +.|+..|+.+++++|+++|+++......
T Consensus 182 ~~gad~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad~~~~~--------~~a~~~~~~~iv~~Ll~~g~~~~~~~~~ 253 (285)
T 3kea_A 182 DYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDINIYSAN--------LENVLLDDAEIAKMIIEKHVEYKSDSYT 253 (285)
T ss_dssp HHHHHTCTTCCCBCCTTHHHHHHHTCHHHHHHHTTSCBCSTTTT--------GGGGTTTCHHHHHHHHHHHHHHTTCTTT
T ss_pred HcCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCC--------hhhhhcCCHHHHHHHHHcCCCCCCcccc
Confidence 9999999999999998 999999999999999999999987754 2567899999999999999887655443
No 18
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=9.3e-39 Score=320.36 Aligned_cols=311 Identities=21% Similarity=0.231 Sum_probs=200.3
Q ss_pred CcHHHHHHhcCcHHHHHHHHHccccccccCCCCCcchhHHHhhccccccccCCCCCCCHHHHHhhhhhhhchHHHHHHHH
Q psy903 32 ESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVSCALDEAAAAL 111 (739)
Q Consensus 32 ~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (739)
..+|.-|+..|+.+.+..++++...+... .+++.-+...|.. +....+
T Consensus 38 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~g~~------------~~~~~~--------------- 85 (373)
T 2fo1_E 38 QHSLLEASYDGYIKRQRNELQHYSLYPNP-----QGYGNGNDFLGDF------------NHTNLQ--------------- 85 (373)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccCCccccchhhhhhhhccccCc-----cccCCCCCccccc------------cccccc---------------
Confidence 34677788888999999888877665311 1444444444421 111111
Q ss_pred HhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCC-CCCCcHHHHHHHcCcHHHHHHHH--------hCCCCc
Q psy903 112 TRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETT-DEGESLLSLACSAGYYELAQVLL--------AMHANV 182 (739)
Q Consensus 112 ~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll--------~~~~~~ 182 (739)
....+...+.|+||.|+..+. +++++|+. .+++..+ ..|.||||+|+..|+.+++++|+ +.|+++
T Consensus 86 ---~~~~~~~~g~t~L~~Aa~~~~-~~~~~L~~--~~~n~~d~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~v 159 (373)
T 2fo1_E 86 ---IPTEPEPESPIKLHTEAAGSY-AITEPITR--ESVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADV 159 (373)
T ss_dssp -----------CCCHHHHHHHSSS-CCCSCCST--TTTTTCCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCT
T ss_pred ---cccCCCCCCccHHHHHhcCCc-hHHHHhcc--ccccccCCcCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCC
Confidence 122345667888888888554 67776654 4666677 67888888888888877776665 678887
Q ss_pred cccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCC---CCCCCCCCCCCcH
Q psy903 183 EDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECG---ANVEDHNENGHTP 259 (739)
Q Consensus 183 ~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~---~~~~~~~~~~~t~ 259 (739)
+..+.. |.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|++++ ++++..+..|.||
T Consensus 160 n~~d~~-g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~ 238 (373)
T 2fo1_E 160 NAMDCD-ENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTA 238 (373)
T ss_dssp TCCCTT-SCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCH
T ss_pred cCCCCC-CCCHHHHHHHcChHHHHHHHHHCCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCH
Confidence 766544 458888888888888888888888888888888888888888888888888888877 6788888888888
Q ss_pred HHHHHhcC---ChHHHHHHHHcCCCCccc-------CcCccCCHHHHHHHcCCHHHHHHHHHcC-CCCCCCCCcCCcHHH
Q psy903 260 LMEAASAG---HVGVAKILLEYGAGINTH-------SNEFKESALTLACYKGHLDMVRFLLSAG-ADQEHKTDEMHTALM 328 (739)
Q Consensus 260 L~~A~~~~---~~~ii~~Ll~~~~~~~~~-------~~~~~~~~l~~A~~~~~~~~v~~Ll~~~-~~~~~~~~~~~~~l~ 328 (739)
||+|+..+ +.+++++|+++|++++.. .+..|.||||+|+..|+.+++++|++.+ ++++..+..|.|||+
T Consensus 239 L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~ 318 (373)
T 2fo1_E 239 LMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIM 318 (373)
T ss_dssp HHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHH
T ss_pred HHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHH
Confidence 88888877 788888888888777642 2345778888888888888888888765 788888888888888
Q ss_pred HHHhCCchHHHHHHHHcCCCchhhhcccCCCCCCCCCCCCCcccccchHHHHHHhcCCHHHHHHHHHCCCCCccCCCCCC
Q psy903 329 EASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGE 408 (739)
Q Consensus 329 ~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~ 408 (739)
+|+..|+.+++++|+++ |++++..+..|.
T Consensus 319 ~A~~~g~~~iv~~Ll~~---------------------------------------------------gad~~~~d~~g~ 347 (373)
T 2fo1_E 319 LAAQEGRIEVVMYLIQQ---------------------------------------------------GASVEAVDATDH 347 (373)
T ss_dssp HHHHHTCHHHHHHHHHT---------------------------------------------------TCCSSCCCSSSC
T ss_pred HHHHcCCHHHHHHHHHc---------------------------------------------------CCCccCCCCCCC
Confidence 88777777766666654 445677889999
Q ss_pred CHHHHHHHcCcHHHHHHHHHcCCC
Q psy903 409 SLLSLACSAGYYELAQVLLAMHAN 432 (739)
Q Consensus 409 t~l~~a~~~~~~~~v~~Ll~~~~~ 432 (739)
|||++|+..++.+++++|++++++
T Consensus 348 t~l~~A~~~g~~~iv~~Ll~~~a~ 371 (373)
T 2fo1_E 348 TARQLAQANNHHNIVDIFDRCRPE 371 (373)
T ss_dssp CHHHHHHHTTCHHHHHHHHTTC--
T ss_pred CHHHHHHHcCCHHHHHHHHhcCcc
Confidence 999999999999999999998765
No 19
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=3e-37 Score=290.06 Aligned_cols=229 Identities=26% Similarity=0.375 Sum_probs=197.7
Q ss_pred CCCcccCCCCCcHHHHHHhcCcHHHHHHHHHccccccccCCCCCcchhHHHhhccccccccCCCCCCCHHHHHhhhhhhh
Q psy903 22 RSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVS 101 (739)
Q Consensus 22 ~~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (739)
.+++..|..|+||||+|+..|+.+++++|+++|++++..+..+. ||||+|+.
T Consensus 2 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~-t~L~~A~~--------------------------- 53 (237)
T 3b7b_A 2 MNFKMEHQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQR-TPLMEAAE--------------------------- 53 (237)
T ss_dssp CCCCCSSCCSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCC-CHHHHHHH---------------------------
T ss_pred CCcccccCCCCCHHHHHHHcCcHHHHHHHHHcCCCcCccCCCCC-CHHHHHHH---------------------------
Confidence 56788999999999999999999999999999999987776554 66666554
Q ss_pred chHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCC-C
Q psy903 102 CALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMH-A 180 (739)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~-~ 180 (739)
.|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|++.+ .
T Consensus 54 -------------------------------~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~ 102 (237)
T 3b7b_A 54 -------------------------------NNHLEAVKYLIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQM 102 (237)
T ss_dssp -------------------------------TTCHHHHHHHHTTTCCCCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCC
T ss_pred -------------------------------hCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCC
Confidence 45789999999999999999999999999999999999999999998 5
Q ss_pred CccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHH
Q psy903 181 NVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPL 260 (739)
Q Consensus 181 ~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L 260 (739)
+++..+ ..|.||||+|+..++.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++..|..|.|||
T Consensus 103 ~~~~~~-~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L 181 (237)
T 3b7b_A 103 DVNCQD-DGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPL 181 (237)
T ss_dssp CTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHHHHHTTTCCTTCCCTTCCCHH
T ss_pred CcccCC-CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCCHH
Confidence 555444 4567999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCChHHHHHHHHcCCCCcccCcCccCCHHHHHHHcCCHHHHHHHHH
Q psy903 261 MEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLS 311 (739)
Q Consensus 261 ~~A~~~~~~~ii~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~ 311 (739)
|+|+..++.+++++|+++|++++.. +..|.|||++|+..++...+..+++
T Consensus 182 ~~A~~~~~~~~v~~Ll~~gad~~~~-d~~g~t~l~~A~~~~~~~~~~~l~~ 231 (237)
T 3b7b_A 182 HIAARENRYDCVVLFLSRDSDVTLK-NKEGETPLQCASLNSQVWSALQMSK 231 (237)
T ss_dssp HHHHHTTCHHHHHHHHTTTCCTTCC-CTTSCCHHHHSCTTCHHHHHHHHHH
T ss_pred HHHHHhCCHhHHHHHHHcCCCCCcc-CCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999988888764 4558888888888888765555543
No 20
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=3.5e-38 Score=297.61 Aligned_cols=229 Identities=25% Similarity=0.334 Sum_probs=172.1
Q ss_pred cccCCCCCcHHHHHHhcCcHHHHHHHHH----ccccccccCCCCCcchhHHHhhccccccccCCCCCCCHHHHHhhhhhh
Q psy903 25 HETTDEGESLLSLACSAGYYELAQVLLA----MHANVEDRGIKGECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSV 100 (739)
Q Consensus 25 ~~~~~~g~t~L~~A~~~~~~~iv~~Ll~----~ga~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (739)
+.+|.+|+||||+|+..|+.+++++|++ .|++++..+..+. ||||+|+..|
T Consensus 3 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~-t~L~~A~~~~------------------------ 57 (241)
T 1k1a_A 3 TRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQ-TPLHLAVITT------------------------ 57 (241)
T ss_dssp ----CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSC-CHHHHHHHTT------------------------
T ss_pred cccCCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCC-CHHHHHHHcC------------------------
Confidence 4577788888888888888888888886 6788887776665 8888877655
Q ss_pred hchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCC
Q psy903 101 SCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHA 180 (739)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~ 180 (739)
+.+++++|++.|++++..+..|.||||+|+..|+.+++++|++.++
T Consensus 58 ----------------------------------~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~ 103 (241)
T 1k1a_A 58 ----------------------------------LPSVVRLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAA 103 (241)
T ss_dssp ----------------------------------CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSC
T ss_pred ----------------------------------CHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 5677888888888888888888888888888888888888888776
Q ss_pred ----CccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCC-CCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCC
Q psy903 181 ----NVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQS-SSGNTPLMYACAGGHEAVVRVLLECGANVEDHNEN 255 (739)
Q Consensus 181 ----~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~-~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~ 255 (739)
+++..+ ..|.||||+|+..|+.+++++|+++|++++..+ ..|.||||+|+..|+.+++++|+++|++++..|..
T Consensus 104 ~~~~~~~~~~-~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~ 182 (241)
T 1k1a_A 104 PGTLDLEARN-YDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYS 182 (241)
T ss_dssp TTSCCTTCCC-TTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTT
T ss_pred CccccccccC-cCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCC
Confidence 444433 344688888888888888888888888887777 67888888888888888888888888888888888
Q ss_pred CCcHHHHHHhcCChHHHHHHHHcCCCCcccCcCccCCHHHHHHHcCCHHHHHHHHHcCC
Q psy903 256 GHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGA 314 (739)
Q Consensus 256 ~~t~L~~A~~~~~~~ii~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~ 314 (739)
|.||||+|+..|+.+++++|+++|++++.. +..|.||+++|+..++.++++.|.++++
T Consensus 183 g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~-~~~g~tpl~~A~~~~~~~i~~~l~~~~a 240 (241)
T 1k1a_A 183 GSSALHSASGRGLLPLVRTLVRSGADSSLK-NCHNDTPLMVARSRRVIDILRGKATRPA 240 (241)
T ss_dssp SCBHHHHHHHHTCHHHHHHHHHTTCCTTCC-CTTSCCTTTTCSSHHHHHHHTC------
T ss_pred CCCHHHHHHHcCCHHHHHHHHhcCCCCCCc-CCCCCCHHHHHHhcCcHHHHhhhccCCC
Confidence 888888888888888888888888877664 4457788888888888888887776653
No 21
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=8.5e-38 Score=292.53 Aligned_cols=220 Identities=28% Similarity=0.371 Sum_probs=138.7
Q ss_pred ChhhhhhcCCHHHHHHHHHcCC-CCcccCCCCCcHHHHHHhcCcHHHHHHHHHccccccccCCCCCcchhHHHhhccccc
Q psy903 1 SLVQACSDGDVKTVKKLLTEGR-SVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGK 79 (739)
Q Consensus 1 ~L~~A~~~g~~~~v~~ll~~g~-~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~~~ 79 (739)
||+.|+..|+++.|++|++.+. .++..|..|+||||+|+..|+.+++++|+++|++++..+..+. ||||+|+..
T Consensus 9 ~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~-t~L~~A~~~---- 83 (231)
T 3aji_A 9 MICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGW-SPLHIAASA---- 83 (231)
T ss_dssp HHHHHHHHTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSC-CHHHHHHHH----
T ss_pred hHHHHHHhCCHHHHHHHHHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcCCCCC-CHHHHHHHc----
Confidence 3566666666666666666443 2455566666666666666666666666666666655554443 444444433
Q ss_pred cccCCCCCCCHHHHHhhhhhhhchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcH
Q psy903 80 LATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESL 159 (739)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~ 159 (739)
|+.+++++|++.|++++..+..|.||
T Consensus 84 ------------------------------------------------------~~~~~v~~Ll~~g~~~~~~~~~g~t~ 109 (231)
T 3aji_A 84 ------------------------------------------------------GXDEIVKALLVKGAHVNAVNQNGCTP 109 (231)
T ss_dssp ------------------------------------------------------TCHHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred ------------------------------------------------------CHHHHHHHHHHcCCCCCCCCCCCCCH
Confidence 35566666666666666666666666
Q ss_pred HHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHH
Q psy903 160 LSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVV 239 (739)
Q Consensus 160 L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v 239 (739)
||+|+..|+.+++++|++.|++++..+.. |.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++
T Consensus 110 L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~-g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v 188 (231)
T 3aji_A 110 LHYAASKNRHEIAVMLLEGGANPDAKDHY-DATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEA 188 (231)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCTT-SCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCcCCC-CCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCHHHHHHHCCCHHHH
Confidence 66666666666666666666666554433 34666666666666666666666666666666666666666666666666
Q ss_pred HHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCC
Q psy903 240 RVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGA 280 (739)
Q Consensus 240 ~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~ 280 (739)
++|+++|++++.+|..|.|||++|+..++.+++++|.++|+
T Consensus 189 ~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~lL~~~~a 229 (231)
T 3aji_A 189 KFLVTQGASIYIENKEEKTPLQVAKGGLGLILKRLAEGEEA 229 (231)
T ss_dssp HHHHHTTCCSCCCCTTSCCHHHHSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCCCCCCCCCCCCHHHHHHhhHHHHHHHHHccccc
Confidence 66666666666666666666666666666666666666544
No 22
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=1.9e-37 Score=293.60 Aligned_cols=197 Identities=26% Similarity=0.340 Sum_probs=95.0
Q ss_pred CCCcCCCCCCcHHHHHHHcC-------------cHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCC
Q psy903 148 SVHETTDEGESLLSLACSAG-------------YYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGA 214 (739)
Q Consensus 148 ~~~~~~~~g~t~L~~A~~~~-------------~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~ 214 (739)
|+|.+|..|.||||+|+..| +.+++++|++.|++++...+..|+||||+|+..|+.+++++|+++|+
T Consensus 2 dvn~~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~ 81 (253)
T 1yyh_A 2 DVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASA 81 (253)
T ss_dssp --------------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred CCCCCCCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCC
Confidence 44555556666666666544 56666666666665555444445566666666666666666666666
Q ss_pred CCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCC-CCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCCCCcccCcCccCCH
Q psy903 215 DVNGQSSSGNTPLMYACAGGHEAVVRVLLECGA-NVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESA 293 (739)
Q Consensus 215 ~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~-~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~~~~~~~~~~~~~~ 293 (739)
+++.++..|.||||+|+..|+.+++++|+++++ +++..+..|.||||+|+..|+.+++++|+++|++++... ..|.||
T Consensus 82 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d-~~g~t~ 160 (253)
T 1yyh_A 82 DANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVD-DLGKSA 160 (253)
T ss_dssp CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBC-TTSCBH
T ss_pred CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcC-CCCCCH
Confidence 666666666666666666666666666666554 555556666666666666666666666666666555432 335566
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCCCCcCCcHHHHHHhCCchHHHHHHHHc
Q psy903 294 LTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDS 345 (739)
Q Consensus 294 l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~L~~~ 345 (739)
||+|+..|+.+++++|++.|++++..+..|.|||++|+..++.+++++|+++
T Consensus 161 L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ 212 (253)
T 1yyh_A 161 LHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDH 212 (253)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHc
Confidence 6666666666666666666666666666666666665555555555544443
No 23
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=2e-38 Score=300.48 Aligned_cols=222 Identities=27% Similarity=0.350 Sum_probs=158.7
Q ss_pred ChhhhhhcCCHHHHHHHHHcCCC--------CcccCCCCCcHHHHHHhcCcHH-HHHHHHHccccccccCCCCCcchhHH
Q psy903 1 SLVQACSDGDVKTVKKLLTEGRS--------VHETTDEGESLLSLACSAGYYE-LAQVLLAMHANVEDRGIKGECTPLME 71 (739)
Q Consensus 1 ~L~~A~~~g~~~~v~~ll~~g~~--------~~~~~~~g~t~L~~A~~~~~~~-iv~~Ll~~ga~~~~~~~~~~~t~l~~ 71 (739)
||+.||..|++++|++||+.|++ ++..+..|.||||.|+..+..+ ++++|+++|++++..+..|. ||||+
T Consensus 14 ~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d~~G~-TpLh~ 92 (269)
T 4b93_B 14 KLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNVTSQDGS-SPLHV 92 (269)
T ss_dssp HHHHHHHTTCHHHHHHHHTCC----------------------------------------CCCCTTCCCTTSC-CHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcCCCCC-CHHHH
Confidence 58999999999999999988775 4556778899999999887654 78999999999988877665 77777
Q ss_pred HhhccccccccCCCCCCCHHHHHhhhhhhhchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCc
Q psy903 72 AASSGFGKLATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHE 151 (739)
Q Consensus 72 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~ 151 (739)
|+..| +.+++++|++.|++++.
T Consensus 93 A~~~g----------------------------------------------------------~~~~v~~Ll~~~a~~~~ 114 (269)
T 4b93_B 93 AALHG----------------------------------------------------------RADLIPLLLKHGANAGA 114 (269)
T ss_dssp HHHTT----------------------------------------------------------CTTHHHHHHHTTCCTTC
T ss_pred HHHcC----------------------------------------------------------cHHHHHHHHhcCCCcCc
Confidence 66554 67888999999999999
Q ss_pred CCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHH
Q psy903 152 TTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYAC 231 (739)
Q Consensus 152 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~ 231 (739)
.+..|.||+++|+..++.+++++|++.|++++..+.. |+||||+|+..|+.+++++|+++|++++.++..|.||||+|+
T Consensus 115 ~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~-g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~ 193 (269)
T 4b93_B 115 RNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLS-GNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAV 193 (269)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTT-CCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHH
T ss_pred cCCCCCCccccccccChHHHHHHHHHCCCCCCCCCCC-CCCHHHHHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHH
Confidence 9999999999999999999999999999988877644 569999999999999999999999999999999999999999
Q ss_pred hcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCC-hHHHHHHHHcCCCC
Q psy903 232 AGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGH-VGVAKILLEYGAGI 282 (739)
Q Consensus 232 ~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~-~~ii~~Ll~~~~~~ 282 (739)
..|+.++|++|+++|++++.+|.+|.||||+|+++++ .++++++...+...
T Consensus 194 ~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~~~i~~lL~~l~~~~~~~ 245 (269)
T 4b93_B 194 IEKHVFVVELLLLHGASVQVLNKRQRTAVDCAEQNSKIMELLQVVPSCVASL 245 (269)
T ss_dssp HTTCHHHHHHHHHTTCCSCCCCTTSCCSGGGSCTTCHHHHHTTC--------
T ss_pred HcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHhCCcHHHHHHHHHHhchhh
Confidence 9999999999999999999999999999999987775 35555555554443
No 24
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=2.4e-37 Score=291.96 Aligned_cols=221 Identities=26% Similarity=0.338 Sum_probs=194.1
Q ss_pred ChhhhhhcCCHHHHHHHHH----cCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHHccccccccCCCCCcchhHHHhhcc
Q psy903 1 SLVQACSDGDVKTVKKLLT----EGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSG 76 (739)
Q Consensus 1 ~L~~A~~~g~~~~v~~ll~----~g~~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~ 76 (739)
|||.|+..|+.++|++|++ .|++++..|..|+||||+|+..|+.+++++|+++|++++..+..+. ||||+|+.
T Consensus 12 ~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~-t~l~~A~~-- 88 (241)
T 1k1a_A 12 PLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQ-TAAHLACE-- 88 (241)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSC-CHHHHHHH--
T ss_pred HHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCC-CHHHHHHH--
Confidence 6899999999999999997 7899999999999999999999999999999999999887776554 66666554
Q ss_pred ccccccCCCCCCCHHHHHhhhhhhhchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCC----CCCcC
Q psy903 77 FGKLATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGR----SVHET 152 (739)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~----~~~~~ 152 (739)
.|+.+++++|++.+. +++..
T Consensus 89 --------------------------------------------------------~~~~~~~~~Ll~~~~~~~~~~~~~ 112 (241)
T 1k1a_A 89 --------------------------------------------------------HRSPTCLRALLDSAAPGTLDLEAR 112 (241)
T ss_dssp --------------------------------------------------------TTCHHHHHHHHHHSCTTSCCTTCC
T ss_pred --------------------------------------------------------cCCHHHHHHHHHcCCCcccccccc
Confidence 457889999999887 88888
Q ss_pred CCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHh
Q psy903 153 TDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACA 232 (739)
Q Consensus 153 ~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~ 232 (739)
+..|.||||+|+..|+.+++++|++.|++++..+...|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+.
T Consensus 113 ~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 192 (241)
T 1k1a_A 113 NYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASG 192 (241)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHH
T ss_pred CcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHH
Confidence 99999999999999999999999999999988876667899999999999999999999999999999999999999999
Q ss_pred cCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCC
Q psy903 233 GGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGA 280 (739)
Q Consensus 233 ~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~ 280 (739)
.|+.+++++|+++|++++.+|..|.|||++|+..|+.++++.|.++++
T Consensus 193 ~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~i~~~l~~~~a 240 (241)
T 1k1a_A 193 RGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILRGKATRPA 240 (241)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCTTSCCTTTTCSSHHHHHHHTC------
T ss_pred cCCHHHHHHHHhcCCCCCCcCCCCCCHHHHHHhcCcHHHHhhhccCCC
Confidence 999999999999999999999999999999999999999999988754
No 25
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=6.7e-37 Score=287.71 Aligned_cols=217 Identities=25% Similarity=0.308 Sum_probs=200.7
Q ss_pred ChhhhhhcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHHccccccccCCCCCcchhHHHhhcccccc
Q psy903 1 SLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKL 80 (739)
Q Consensus 1 ~L~~A~~~g~~~~v~~ll~~g~~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~~~~ 80 (739)
||+.|+..|+.++|++|++.|++++..+..|+||||+|+..|+.+++++|+++|++++..+..+. ||||+|+.
T Consensus 14 ~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~-t~L~~A~~------ 86 (237)
T 3b7b_A 14 PLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGS-TCLHLAAK------ 86 (237)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSC-CHHHHHHH------
T ss_pred HHHHHHHcCcHHHHHHHHHcCCCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCC-cHHHHHHH------
Confidence 68999999999999999999999999999999999999999999999999999999987776554 66666554
Q ss_pred ccCCCCCCCHHHHHhhhhhhhchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcC-CCCCcCCCCCCcH
Q psy903 81 ATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEG-RSVHETTDEGESL 159 (739)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~-~~~~~~~~~g~t~ 159 (739)
.|+.+++++|++.| .+++..+..|.||
T Consensus 87 ----------------------------------------------------~~~~~~~~~Ll~~~~~~~~~~~~~g~t~ 114 (237)
T 3b7b_A 87 ----------------------------------------------------KGHYEVVQYLLSNGQMDVNCQDDGGWTP 114 (237)
T ss_dssp ----------------------------------------------------TTCHHHHHHHHTTTCCCTTCCCTTSCCH
T ss_pred ----------------------------------------------------cCCHHHHHHHHhCCCCCcccCCCCCCCH
Confidence 45789999999998 8999999999999
Q ss_pred HHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHH
Q psy903 160 LSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVV 239 (739)
Q Consensus 160 L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v 239 (739)
||+|+..|+.+++++|++.|++++..+.. |.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..++.+++
T Consensus 115 L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~-g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v 193 (237)
T 3b7b_A 115 MIWATEYKHVDLVKLLLSKGSDINIRDNE-ENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCV 193 (237)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCTT-SCCHHHHHHHHCCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHH
T ss_pred HHHHHHcCCHHHHHHHHHCCCCCCccCCC-CCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHhHH
Confidence 99999999999999999999998877655 56999999999999999999999999999999999999999999999999
Q ss_pred HHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHH
Q psy903 240 RVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLE 277 (739)
Q Consensus 240 ~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~ 277 (739)
++|+++|++++.+|..|.|||++|+..++.+.+..+++
T Consensus 194 ~~Ll~~gad~~~~d~~g~t~l~~A~~~~~~~~~~~l~~ 231 (237)
T 3b7b_A 194 VLFLSRDSDVTLKNKEGETPLQCASLNSQVWSALQMSK 231 (237)
T ss_dssp HHHHTTTCCTTCCCTTSCCHHHHSCTTCHHHHHHHHHH
T ss_pred HHHHHcCCCCCccCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999876666654
No 26
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=2.8e-37 Score=299.29 Aligned_cols=251 Identities=24% Similarity=0.254 Sum_probs=192.5
Q ss_pred CcccCCCCCcHHHHHHhcCcHHHHHHHHHcccc---ccccCCCCCcchhHHHhhccccccccCCCCCCCHHHHHhhhhhh
Q psy903 24 VHETTDEGESLLSLACSAGYYELAQVLLAMHAN---VEDRGIKGECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSV 100 (739)
Q Consensus 24 ~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~ga~---~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (739)
++.+|..|+||||+|+..|+.++|++|+++|++ ++..+..|. ||||+|+.
T Consensus 2 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~-t~L~~A~~-------------------------- 54 (282)
T 1oy3_D 2 FGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQ-TALHLAAI-------------------------- 54 (282)
T ss_dssp CCCCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSC-CHHHHHHH--------------------------
T ss_pred CCccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCC-CHHHHHHH--------------------------
Confidence 467899999999999999999999999999998 555555443 66655554
Q ss_pred hchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCC
Q psy903 101 SCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHA 180 (739)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~ 180 (739)
.|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|++.++
T Consensus 55 --------------------------------~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~ 102 (282)
T 1oy3_D 55 --------------------------------LGEASTVEKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRP 102 (282)
T ss_dssp --------------------------------HTCHHHHHHHHHTTCCSSCCCTTSCCHHHHHTTTTCHHHHHHHSSSCC
T ss_pred --------------------------------cCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCcchhHhhhccCC
Confidence 457999999999999999999999999999999999999999999987
Q ss_pred CccccC------------CCCCCcHHHHHHHcCcH-HHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCC
Q psy903 181 NVEDRG------------IKGECTPLMEAASSGFI-EIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGA 247 (739)
Q Consensus 181 ~~~~~~------------~~~~~t~L~~A~~~~~~-~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~ 247 (739)
+..... ...+.++++.++..+.. .....+...+.+++.++..|.||||+|+..|+.+++++|+++|+
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~ 182 (282)
T 1oy3_D 103 SHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGA 182 (282)
T ss_dssp SSCCCC-----------------------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTC
T ss_pred CCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCC
Confidence 643221 12234666666655543 34445556688899999999999999999999999999999999
Q ss_pred CCCCCCCC-CCcHHHHHHhcCChHHHHHHHHcCCCCcccCcCccCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCcCCcH
Q psy903 248 NVEDHNEN-GHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTA 326 (739)
Q Consensus 248 ~~~~~~~~-~~t~L~~A~~~~~~~ii~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~ 326 (739)
+++..+.. |.||||+|+..|+.+++++|+++|++++.. +..|.||||+|+..++.+++++|+++|++++.++..|.||
T Consensus 183 ~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~-d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tp 261 (282)
T 1oy3_D 183 DLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTAR-MYGGRTPLGSALLRPNPILARLLRAHGAPEPEDGGDKLSP 261 (282)
T ss_dssp CTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCC-CTTSCCHHHHHHTSSCHHHHHHHHHTTCCCCCCC------
T ss_pred CCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCccc-ccCCCCHHHHHHHcCCcHHHHHHHHcCCCcCcCCCccccc
Confidence 99998854 999999999999999999999999999875 4569999999999999999999999999999999999999
Q ss_pred HHHHHhCC
Q psy903 327 LMEASMDG 334 (739)
Q Consensus 327 l~~a~~~~ 334 (739)
+++|....
T Consensus 262 l~~a~~~~ 269 (282)
T 1oy3_D 262 CSSSGSDS 269 (282)
T ss_dssp --------
T ss_pred ccccCCcc
Confidence 99988654
No 27
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=1.9e-37 Score=300.61 Aligned_cols=254 Identities=18% Similarity=0.133 Sum_probs=186.0
Q ss_pred ChhhhhhcCCHHHHHHHHHcCCC---CcccCCCCCcHHHHHHhcCcHHHHHHHHHccccccccCCCCCcchhHHHhhccc
Q psy903 1 SLVQACSDGDVKTVKKLLTEGRS---VHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGF 77 (739)
Q Consensus 1 ~L~~A~~~g~~~~v~~ll~~g~~---~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~ 77 (739)
|||.|+..|+.++|++|++.|++ ++.++..|+||||+|+..|+.++|++|+++|++++..+..+. ||||+|+..|
T Consensus 12 ~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~-tpL~~A~~~~- 89 (282)
T 1oy3_D 12 ALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGH-TALHLACRVR- 89 (282)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSC-CHHHHHTTTT-
T ss_pred HHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCC-CHHHHHHHcC-
Confidence 69999999999999999999988 888999999999999999999999999999999999887776 9999999999
Q ss_pred cccccCCCCCCCHHHHHhhhhhhhchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCH-HHHHHHHhcCCCCCcCCCCC
Q psy903 78 GKLATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDV-KTVKKLLTEGRSVHETTDEG 156 (739)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~-~~~~~ll~~~~~~~~~~~~g 156 (739)
..++++.+............................++++.++..+.. .....+...+.+++..+..|
T Consensus 90 -----------~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 158 (282)
T 1oy3_D 90 -----------AHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDG 158 (282)
T ss_dssp -----------CHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTS
T ss_pred -----------CcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCC
Confidence 677777776644321110000000011111122334455555544433 33444445678889999999
Q ss_pred CcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcH
Q psy903 157 ESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHE 236 (739)
Q Consensus 157 ~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~ 236 (739)
.||||+|+..|+.+++++|+++|++++..+...|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.
T Consensus 159 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~ 238 (282)
T 1oy3_D 159 HTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNP 238 (282)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTSSCH
T ss_pred cCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCHHHHHHHcCCc
Confidence 99999999999999999999999999988877678999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHCCCCCCCCCCCCCcHHHHHHhcC
Q psy903 237 AVVRVLLECGANVEDHNENGHTPLMEAASAG 267 (739)
Q Consensus 237 ~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~ 267 (739)
+++++|+++|++++.++..|.|||++|....
T Consensus 239 ~~v~~Ll~~ga~~~~~~~~g~tpl~~a~~~~ 269 (282)
T 1oy3_D 239 ILARLLRAHGAPEPEDGGDKLSPCSSSGSDS 269 (282)
T ss_dssp HHHHHHHHTTCCCCCCC--------------
T ss_pred HHHHHHHHcCCCcCcCCCcccccccccCCcc
Confidence 9999999999999999999999999997654
No 28
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.4e-37 Score=294.52 Aligned_cols=237 Identities=29% Similarity=0.401 Sum_probs=176.2
Q ss_pred ccCCCCCcHHHHHHhcCcHHHHHHHHHccccccccCCCCCcchhHHHhhccccccccCCCCCCCHHHHHhhhhhhhchHH
Q psy903 26 ETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVSCALD 105 (739)
Q Consensus 26 ~~~~~g~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (739)
.+|..+.|||+.||..|+.++|++|++.|++........
T Consensus 6 kkd~~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~----------------------------------------- 44 (269)
T 4b93_B 6 KKDYREVEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDT----------------------------------------- 44 (269)
T ss_dssp -CCCHHHHHHHHHHHTTCHHHHHHHHTCC---------------------------------------------------
T ss_pred ccCccchhHHHHHHHcCCHHHHHHHHHCCCccccccccc-----------------------------------------
Confidence 467788999999999999999999999998642211000
Q ss_pred HHHHHHHhhhcCCCCCCCchHHHHHHHcCCH-HHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccc
Q psy903 106 EAAAALTRMRNENPRPQNERSLVQACSDGDV-KTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVED 184 (739)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~-~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~ 184 (739)
.......+.++|+.|+..++. .++++|++.|+++|..|.+|.||||+|+..|+.++|++|++.|++++.
T Consensus 45 ----------~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~ 114 (269)
T 4b93_B 45 ----------VSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGA 114 (269)
T ss_dssp ----------------------------------------CCCCTTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTC
T ss_pred ----------ccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCc
Confidence 001112234555555554444 478899999999999999999999999999999999999999999887
Q ss_pred cCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHH
Q psy903 185 RGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAA 264 (739)
Q Consensus 185 ~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~ 264 (739)
.+.. |.||++.|+..++.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+
T Consensus 115 ~~~~-g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~ 193 (269)
T 4b93_B 115 RNAD-QAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAV 193 (269)
T ss_dssp CCTT-CCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHH
T ss_pred cCCC-CCCccccccccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHH
Confidence 7655 469999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCChHHHHHHHHcCCCCcccCcCccCCHHHHHHHcCC-HHHHHHHHHcCCC
Q psy903 265 SAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGH-LDMVRFLLSAGAD 315 (739)
Q Consensus 265 ~~~~~~ii~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~-~~~v~~Ll~~~~~ 315 (739)
..|+.+++++|+++|++++.. +..|+|||++|+++++ .++++++.+.+..
T Consensus 194 ~~g~~~~v~~Ll~~Gad~~~~-d~~G~TpL~~A~~~~~i~~lL~~l~~~~~~ 244 (269)
T 4b93_B 194 IEKHVFVVELLLLHGASVQVL-NKRQRTAVDCAEQNSKIMELLQVVPSCVAS 244 (269)
T ss_dssp HTTCHHHHHHHHHTTCCSCCC-CTTSCCSGGGSCTTCHHHHHTTC-------
T ss_pred HcCCHHHHHHHHHCCCCCCCc-CCCCCCHHHHHHhCCcHHHHHHHHHHhchh
Confidence 999999999999999999875 4569999999988775 3455555554443
No 29
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=4.4e-36 Score=280.88 Aligned_cols=226 Identities=27% Similarity=0.295 Sum_probs=196.0
Q ss_pred CCCCcHHHHHHhcCcHHHHHHHHHccccc-cccCCCCCcchhHHHhhccccccccCCCCCCCHHHHHhhhhhhhchHHHH
Q psy903 29 DEGESLLSLACSAGYYELAQVLLAMHANV-EDRGIKGECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVSCALDEA 107 (739)
Q Consensus 29 ~~g~t~L~~A~~~~~~~iv~~Ll~~ga~~-~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (739)
..+.||||.|+..|+.++++.|++.+... +..+..+ .||||+|+
T Consensus 4 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g-~t~L~~A~---------------------------------- 48 (231)
T 3aji_A 4 CVSNIMICNLAYSGKLDELKERILADKSLATRTDQDS-RTALHWAC---------------------------------- 48 (231)
T ss_dssp CCSSSHHHHHHHHTCHHHHHHHHHHCGGGGGCCCTTS-CCHHHHHH----------------------------------
T ss_pred ccccchHHHHHHhCCHHHHHHHHHhchhhhhcCCCCC-CCHHHHHH----------------------------------
Confidence 45789999999999999999999987653 3333333 25555544
Q ss_pred HHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCC
Q psy903 108 AAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGI 187 (739)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~ 187 (739)
..|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|+++|++++..+.
T Consensus 49 ------------------------~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 104 (231)
T 3aji_A 49 ------------------------SAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQ 104 (231)
T ss_dssp ------------------------HHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT
T ss_pred ------------------------HcCcHHHHHHHHHhCCCCCCcCCCCCCHHHHHHHcCHHHHHHHHHHcCCCCCCCCC
Confidence 55588999999999999999999999999999999999999999999999887665
Q ss_pred CCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcC
Q psy903 188 KGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAG 267 (739)
Q Consensus 188 ~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~ 267 (739)
. |.||||+|+..++.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|
T Consensus 105 ~-g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 183 (231)
T 3aji_A 105 N-GCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEE 183 (231)
T ss_dssp T-SCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTT
T ss_pred C-CCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCHHHHHHHCC
Confidence 4 469999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHcCCCCcccCcCccCCHHHHHHHcCCHHHHHHHHHcCCC
Q psy903 268 HVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGAD 315 (739)
Q Consensus 268 ~~~ii~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~ 315 (739)
+.+++++|+++|++++.. +..|.||+++|+..++.+++++|.++|++
T Consensus 184 ~~~~v~~Ll~~ga~~~~~-~~~g~t~l~~A~~~~~~~i~~lL~~~~a~ 230 (231)
T 3aji_A 184 RVEEAKFLVTQGASIYIE-NKEEKTPLQVAKGGLGLILKRLAEGEEAS 230 (231)
T ss_dssp CHHHHHHHHHTTCCSCCC-CTTSCCHHHHSCHHHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHCCCCCCCC-CCCCCCHHHHHHhhHHHHHHHHHcccccc
Confidence 999999999999988764 55688999999998899999999887654
No 30
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=1.9e-36 Score=281.59 Aligned_cols=215 Identities=23% Similarity=0.275 Sum_probs=192.2
Q ss_pred CCHHHHHHHHHcCCCCccc-CCCCCcHHHHHHhcCcHHHHHHHHHccccccccCCCCCcchhHHHhhccccccccCCCCC
Q psy903 9 GDVKTVKKLLTEGRSVHET-TDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKLATGDGKL 87 (739)
Q Consensus 9 g~~~~v~~ll~~g~~~~~~-~~~g~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~ 87 (739)
|+.++|++|++.|++++.. |..|+||||+|+..|+.+++++|+++|++++..+..+. ||||+|+.
T Consensus 2 g~~~~i~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~-t~L~~A~~------------- 67 (223)
T 2f8y_A 2 DAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGR-TPLHAAVS------------- 67 (223)
T ss_dssp ---CCEETTEETTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSC-CHHHHHHH-------------
T ss_pred CcHHHHHHHHHcCCCcccccCCCCCchHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCC-CHHHHHHH-------------
Confidence 6788999999999999776 88999999999999999999999999999988776654 66666655
Q ss_pred CCHHHHHhhhhhhhchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCC-CCCcCCCCCCcHHHHHHHc
Q psy903 88 ADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGR-SVHETTDEGESLLSLACSA 166 (739)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~-~~~~~~~~g~t~L~~A~~~ 166 (739)
.|+.+++++|++.+. +++..+..|.||||+|+..
T Consensus 68 ---------------------------------------------~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~ 102 (223)
T 2f8y_A 68 ---------------------------------------------ADAQGVFQILIRNRATDLDARMHDGTTPLILAARL 102 (223)
T ss_dssp ---------------------------------------------TTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHHH
T ss_pred ---------------------------------------------cCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHHHh
Confidence 457899999999887 8888999999999999999
Q ss_pred CcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCC
Q psy903 167 GYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECG 246 (739)
Q Consensus 167 ~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~ 246 (739)
|+.+++++|++.|++++..+.. |.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|
T Consensus 103 ~~~~~~~~Ll~~g~~~~~~~~~-g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 181 (223)
T 2f8y_A 103 AVEGMLEDLINSHADVNAVDDL-GKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHF 181 (223)
T ss_dssp TCHHHHHHHHHTTCCTTCBCTT-SCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTT
T ss_pred CcHHHHHHHHHcCCCCcCcCCC-CCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcC
Confidence 9999999999999998877654 569999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCCCCc
Q psy903 247 ANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGIN 283 (739)
Q Consensus 247 ~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~~~~ 283 (739)
++++.++..|.|||++|+..++.+++++|+++|....
T Consensus 182 a~~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~g~~~~ 218 (223)
T 2f8y_A 182 ANRDITDHMDRLPRDIAQERMHHDIVRLLDEYNLVRS 218 (223)
T ss_dssp CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCSSC
T ss_pred CCCccccccCCCHHHHHHHhcchHHHHHHHHcCCCcc
Confidence 9999999999999999999999999999999987643
No 31
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=7.7e-36 Score=281.73 Aligned_cols=222 Identities=28% Similarity=0.334 Sum_probs=139.4
Q ss_pred ChhhhhhcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHHccccccccCCCCCcchhHHHhhcccccc
Q psy903 1 SLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKL 80 (739)
Q Consensus 1 ~L~~A~~~g~~~~v~~ll~~g~~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~~~~ 80 (739)
||+.|+..|+.++|++|++.|++++.++..|.||||+|+..|+.+++++|+++|++++......+.||||+|+
T Consensus 12 ~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~------- 84 (240)
T 3eu9_A 12 DIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWAT------- 84 (240)
T ss_dssp CHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHH-------
T ss_pred HHHHHHHcCChHHHHHHHHcCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHH-------
Confidence 4666666666666666666666666666666666666666666666666666666655444332324443333
Q ss_pred ccCCCCCCCHHHHHhhhhhhhchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHH
Q psy903 81 ATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLL 160 (739)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L 160 (739)
..|+.+++++|++.|++++..+..|.|||
T Consensus 85 ---------------------------------------------------~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l 113 (240)
T 3eu9_A 85 ---------------------------------------------------RQGHLSMVVQLMKYGADPSLIDGEGCSCI 113 (240)
T ss_dssp ---------------------------------------------------HHTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred ---------------------------------------------------HcCCHHHHHHHHHcCCCCcccCCCCCCHH
Confidence 33456666666666666666666666666
Q ss_pred HHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCc-HHHHHHHHHCCCCCCCCCC-CCCcHHHHHHhcCcHHH
Q psy903 161 SLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGF-IEIVRLLINHGADVNGQSS-SGNTPLMYACAGGHEAV 238 (739)
Q Consensus 161 ~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~-~~~~~~Ll~~g~~~~~~~~-~~~t~L~~A~~~~~~~~ 238 (739)
|+|+..|+.+++++|++.|++++..+.. |.||||+|+..++ .+++++|++.|++++..+. .|.||||+|+..|+.++
T Consensus 114 ~~A~~~~~~~~~~~Ll~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~ 192 (240)
T 3eu9_A 114 HLAAQFGHTSIVAYLIAKGQDVDMMDQN-GMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTV 192 (240)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCTT-SCCHHHHHHHHCCSSTTHHHHHHTTCCTTCCCTTTCCCHHHHHHHHTCHHH
T ss_pred HHHHHcCHHHHHHHHHhcCCCccccCCC-CCcHHHHHHHhCChHHHHHHHHhcCCCcchhhccCCCcHHHHHHHcCCHHH
Confidence 6666666666666666666666554433 3466666664444 5666666666666666665 66666666666666666
Q ss_pred HHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCCC
Q psy903 239 VRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAG 281 (739)
Q Consensus 239 v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~~ 281 (739)
+++|+++|++++..+..|.|||++|+..|+.+++++|++.+..
T Consensus 193 v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~ 235 (240)
T 3eu9_A 193 ISLLLEAGANVDAQNIKGESALDLAKQRKNVWMINHLQEARQA 235 (240)
T ss_dssp HHHHHHHTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHC--
T ss_pred HHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHhhhc
Confidence 6666666666666666666666666666666666666666544
No 32
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=2.9e-35 Score=277.80 Aligned_cols=231 Identities=26% Similarity=0.330 Sum_probs=217.9
Q ss_pred CCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHH
Q psy903 119 PRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAA 198 (739)
Q Consensus 119 ~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~ 198 (739)
.+..+.++|+.|+..|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|++.|++++......+.||||+|+
T Consensus 5 ~d~~~~~~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~ 84 (240)
T 3eu9_A 5 IDDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWAT 84 (240)
T ss_dssp CSCGGGCCHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHH
T ss_pred cccccchHHHHHHHcCChHHHHHHHHcCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHH
Confidence 34567889999999999999999999999999999999999999999999999999999999998888777889999999
Q ss_pred HcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCC-hHHHHHHHH
Q psy903 199 SSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGH-VGVAKILLE 277 (739)
Q Consensus 199 ~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~-~~ii~~Ll~ 277 (739)
..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++..+..|.|||++|+..++ .+++++|++
T Consensus 85 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~ 164 (240)
T 3eu9_A 85 RQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLT 164 (240)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTHHHHHH
T ss_pred HcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999999999999999999997665 899999999
Q ss_pred cCCCCcccCcCccCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCcCCcHHHHHHhCCchHHHHHHHHcCCCc
Q psy903 278 YGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQS 349 (739)
Q Consensus 278 ~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~L~~~~~~~ 349 (739)
.|.+++......+.||||+|+..++.+++++|+++|++++..+..|.||+++|+..++.+++++|++.+...
T Consensus 165 ~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~~ 236 (240)
T 3eu9_A 165 FNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQRKNVWMINHLQEARQAK 236 (240)
T ss_dssp TTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHC---
T ss_pred cCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHhhhcc
Confidence 999999877667999999999999999999999999999999999999999999999999999999987653
No 33
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=1.2e-35 Score=277.39 Aligned_cols=214 Identities=29% Similarity=0.388 Sum_probs=138.8
Q ss_pred ChhhhhhcCCHHHHHHHHHcCCCCcc-cCCCCCcHHHHHHhcCcHHHHHHHHHcccc--ccc-cCCCCCcchhHHHhhcc
Q psy903 1 SLVQACSDGDVKTVKKLLTEGRSVHE-TTDEGESLLSLACSAGYYELAQVLLAMHAN--VED-RGIKGECTPLMEAASSG 76 (739)
Q Consensus 1 ~L~~A~~~g~~~~v~~ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~iv~~Ll~~ga~--~~~-~~~~~~~t~l~~a~~~~ 76 (739)
||+.|+..|+.++|++|++.|.+... .|..|+||||+|+..|+.+++++|+++|++ ++. .+..+
T Consensus 5 ~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g------------ 72 (228)
T 2dzn_A 5 PLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSG------------ 72 (228)
T ss_dssp HHHHHHHTTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTS------------
T ss_pred HHHHHHHhCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCC------------
Confidence 46677777777777777776655543 666677777777777777777777777633 322 22222
Q ss_pred ccccccCCCCCCCHHHHHhhhhhhhchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcC--CCCCcCCC
Q psy903 77 FGKLATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEG--RSVHETTD 154 (739)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~--~~~~~~~~ 154 (739)
.|+|+.|+..|+.+++++|++.| ++++..+.
T Consensus 73 -----------------------------------------------~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~ 105 (228)
T 2dzn_A 73 -----------------------------------------------WTPFHIACSVGNLEVVKSLYDRPLKPDLNKITN 105 (228)
T ss_dssp -----------------------------------------------CCHHHHHHHHCCHHHHHHHHSSSSCCCTTCCCT
T ss_pred -----------------------------------------------CCHHHHHHHcCCHHHHHHHHhCCCCcccccCCc
Confidence 23333333444666777777766 66666666
Q ss_pred CCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCC-CCCCCCCCCCCcHHHHHHhc
Q psy903 155 EGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHG-ADVNGQSSSGNTPLMYACAG 233 (739)
Q Consensus 155 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~~~t~L~~A~~~ 233 (739)
.|.||||+|+..|+.+++++|+++|++++..+.. |.||||+|+..|+.+++++|+++| ++++.+|..|.||||+|+..
T Consensus 106 ~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~-g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~ 184 (228)
T 2dzn_A 106 QGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKF-NQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAE 184 (228)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTT-SCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHT
T ss_pred CCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCC-CCCHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCCHHHHHHHc
Confidence 7777777777777777777777777766655543 347777777777777777777776 66777777777777777777
Q ss_pred CcHHHHHHHH-HCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHH
Q psy903 234 GHEAVVRVLL-ECGANVEDHNENGHTPLMEAASAGHVGVAKILLE 277 (739)
Q Consensus 234 ~~~~~v~~Ll-~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~ 277 (739)
|+.+++++|+ ++|++++.+|..|.||+++|+.. ++.++|++
T Consensus 185 ~~~~~v~~Ll~~~ga~~~~~~~~g~t~l~~A~~~---~~~~~l~~ 226 (228)
T 2dzn_A 185 GHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALNE---QVKKFFLN 226 (228)
T ss_dssp TCHHHHHHHHHHHCCCSCCBCTTSCBGGGGCSST---THHHHHHT
T ss_pred CCHHHHHHHHHhcCCCCCccCCCCCcHHHHHHHH---HHHHHHHh
Confidence 7777777777 66777777777777777776443 45555543
No 34
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=3.9e-36 Score=288.95 Aligned_cols=214 Identities=20% Similarity=0.206 Sum_probs=195.1
Q ss_pred HHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHH
Q psy903 131 CSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLI 210 (739)
Q Consensus 131 ~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll 210 (739)
+...+.+.+..++..+ +++..|..|.||||+|+..|+.+++++|++.|++++..+ |+||||+|+..|+.+++++|+
T Consensus 7 i~~~~~~~v~~lL~~~-~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~---g~t~L~~A~~~g~~~~v~~Ll 82 (285)
T 3kea_A 7 INTWKSKQLKSFLSSK-DTFKADVHGHSASYYAIADNNVRLVCTLLNAGALKNLLE---NEFPLHQAATLEDTKIVKILL 82 (285)
T ss_dssp GGGCCHHHHHHHHHST-TTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGGSCCT---TCCHHHHHTTSSSCHHHHHHH
T ss_pred HHhcCHHHHHHHHHhC-CCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCC---CCCHHHHHHHcCCHHHHHHHH
Confidence 3445556666666554 688999999999999999999999999999999988773 679999999999999999999
Q ss_pred HCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCC-CcHHHHHHhcCChHHHHHHHHcCCCCcccCcCc
Q psy903 211 NHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENG-HTPLMEAASAGHVGVAKILLEYGAGINTHSNEF 289 (739)
Q Consensus 211 ~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~-~t~L~~A~~~~~~~ii~~Ll~~~~~~~~~~~~~ 289 (739)
++|++++.++..|.||||+|+..|+.+++++|+++|++++..+..| .||||+|+..|+.+++++|+++|++.... ..
T Consensus 83 ~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~--~~ 160 (285)
T 3kea_A 83 FSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDL--AI 160 (285)
T ss_dssp HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCC--ST
T ss_pred HCCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccc--cC
Confidence 9999999999999999999999999999999999999999999999 89999999999999999999999876332 26
Q ss_pred cCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCcCCcH-HHHHHhCCchHHHHHHHHcCCCch
Q psy903 290 KESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTA-LMEASMDGHVEVAKLLLDSGAQSV 350 (739)
Q Consensus 290 ~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~-l~~a~~~~~~~~~~~L~~~~~~~~ 350 (739)
|.||||+|+..|+.+++++|+++|++++..+..|.|| |++|+..++.+++++|+++|+++.
T Consensus 161 g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad~~ 222 (285)
T 3kea_A 161 LLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDINIY 222 (285)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTCTTCCCBCCTTHHHHHHHTCHHHHHHHTTSCBCST
T ss_pred CccHHHHHHHcChHHHHHHHHHcCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 8899999999999999999999999999999999997 999999999999999999888754
No 35
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=4e-35 Score=286.42 Aligned_cols=242 Identities=25% Similarity=0.342 Sum_probs=177.0
Q ss_pred ChhhhhhcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHHccccccccCCCCCcchhHHHhhcccccc
Q psy903 1 SLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKL 80 (739)
Q Consensus 1 ~L~~A~~~g~~~~v~~ll~~g~~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~~~~ 80 (739)
||+.|+..|++++|++|++.|++++..|..|+||||+|+..|+.++|++|+++|++++..+..+. ||||+|+..
T Consensus 43 ~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~-tpL~~A~~~----- 116 (299)
T 1s70_B 43 VFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGW-IPLHAAASC----- 116 (299)
T ss_dssp HHHHHHHHTCHHHHHHHHHHCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSC-CHHHHHHHH-----
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCC-cHHHHHHHc-----
Confidence 47889999999999999999999999999999999999999999999999999999887776654 666666654
Q ss_pred ccCCCCCCCHHHHHhhhhhhhchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHH
Q psy903 81 ATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLL 160 (739)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L 160 (739)
|+.+++++|++.|++++..+..|.|||
T Consensus 117 -----------------------------------------------------g~~~~v~~Ll~~g~~~~~~~~~g~t~l 143 (299)
T 1s70_B 117 -----------------------------------------------------GYLDIAEYLISQGAHVGAVNSEGDTPL 143 (299)
T ss_dssp -----------------------------------------------------TCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred -----------------------------------------------------CCHHHHHHHHhCCCCCCCcCCCCCCHH
Confidence 478899999999999999999999999
Q ss_pred HHHHHcCcHHHHHHHHhC-CCCccccCCCCCCcHHHHHHHcCcHHHHHHHHH-CCCCCCCCCCCCCcHHHHHHhcCcHHH
Q psy903 161 SLACSAGYYELAQVLLAM-HANVEDRGIKGECTPLMEAASSGFIEIVRLLIN-HGADVNGQSSSGNTPLMYACAGGHEAV 238 (739)
Q Consensus 161 ~~A~~~~~~~~v~~Ll~~-~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~-~g~~~~~~~~~~~t~L~~A~~~~~~~~ 238 (739)
|+|+..++.+++++++.. +.+++...... .+++ ...++.++. ........+..|.||||+|+..|+.++
T Consensus 144 ~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~-~~~~--------~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~ 214 (299)
T 1s70_B 144 DIAEEEAMEELLQNEVNRQGVDIEAARKEE-ERIM--------LRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEV 214 (299)
T ss_dssp HHCCSHHHHHHHHHHHHHHTCCHHHHHHHH-HHHH--------HHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHH
T ss_pred HHHHhcchHHHHHHHHhhcCCCchhhhhhh-hhHH--------HHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHH
Confidence 999999999999887764 33332211100 0111 122233333 333344456677777777777777777
Q ss_pred HHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCCCCcccCcCccCCHHHHHHHcCCHHHHHHHHHc
Q psy903 239 VRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSA 312 (739)
Q Consensus 239 v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~ 312 (739)
+++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++.. +..|.||+++|+.. ..+.++.+++.
T Consensus 215 v~~Ll~~g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~-d~~g~t~l~~A~~~-~~~~l~~l~~~ 286 (299)
T 1s70_B 215 LKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAV-NKVGQTAFDVADED-ILGYLEELQKK 286 (299)
T ss_dssp HHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCC-CTTSCCTTTSCCSG-GGHHHHHHHHH
T ss_pred HHHHHHcCCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCc-CCCCCCHHHHHHHH-HHHHHHHHHHH
Confidence 77777777777777777777777777777777777777777777654 44577777777553 34455555443
No 36
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=2.6e-34 Score=268.40 Aligned_cols=218 Identities=27% Similarity=0.314 Sum_probs=199.5
Q ss_pred CchHHHHHHHcCCHHHHHHHHhcCCCCCc-CCCCCCcHHHHHHHcCcHHHHHHHHhCC--CCccccCCCCCCcHHHHHHH
Q psy903 123 NERSLVQACSDGDVKTVKKLLTEGRSVHE-TTDEGESLLSLACSAGYYELAQVLLAMH--ANVEDRGIKGECTPLMEAAS 199 (739)
Q Consensus 123 ~~~~l~~A~~~~~~~~~~~ll~~~~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~~--~~~~~~~~~~~~t~L~~A~~ 199 (739)
+.|||+.|+..|+.+++++|++.+.+... .+..|.||||+|+..|+.+++++|++.| .+++...+..|.||||+|+.
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~ 81 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACS 81 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHH
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHH
Confidence 57899999999999999999999987654 8899999999999999999999999999 55555345667899999999
Q ss_pred cCcHHHHHHHHHCC--CCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHH
Q psy903 200 SGFIEIVRLLINHG--ADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLE 277 (739)
Q Consensus 200 ~~~~~~~~~Ll~~g--~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~ 277 (739)
.|+.+++++|+++| ++++..+..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|++
T Consensus 82 ~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 161 (228)
T 2dzn_A 82 VGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCG 161 (228)
T ss_dssp HCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHT
T ss_pred cCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHh
Confidence 99999999999998 8999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cC-CCCcccCcCccCCHHHHHHHcCCHHHHHHHH-HcCCCCCCCCCcCCcHHHHHHhCCchHHHHHHHH
Q psy903 278 YG-AGINTHSNEFKESALTLACYKGHLDMVRFLL-SAGADQEHKTDEMHTALMEASMDGHVEVAKLLLD 344 (739)
Q Consensus 278 ~~-~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll-~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~L~~ 344 (739)
+| .+++. .+..|.||||+|+..++.+++++|+ +.|++++..+..|.||+++|... ++.++|++
T Consensus 162 ~g~~~~~~-~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~~~g~t~l~~A~~~---~~~~~l~~ 226 (228)
T 2dzn_A 162 LGKSAVNW-QDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALNE---QVKKFFLN 226 (228)
T ss_dssp TTCCCSCC-CCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBCTTSCBGGGGCSST---THHHHHHT
T ss_pred cCcccccC-cCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCcHHHHHHHH---HHHHHHHh
Confidence 99 77665 4566999999999999999999999 89999999999999999999754 56666665
No 37
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=2.5e-34 Score=267.34 Aligned_cols=215 Identities=25% Similarity=0.313 Sum_probs=197.9
Q ss_pred CCHHHHHHHHhcCCCCCcC-CCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHC
Q psy903 134 GDVKTVKKLLTEGRSVHET-TDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINH 212 (739)
Q Consensus 134 ~~~~~~~~ll~~~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~ 212 (739)
|+.+++++|+++|++++.. +..|.||||+|+..|+.+++++|++.|++++..+.. |.||||+|+..|+.+++++|+++
T Consensus 2 g~~~~i~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~-g~t~L~~A~~~~~~~~v~~Ll~~ 80 (223)
T 2f8y_A 2 DAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNM-GRTPLHAAVSADAQGVFQILIRN 80 (223)
T ss_dssp ---CCEETTEETTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT-SCCHHHHHHHTTCHHHHHHHHHB
T ss_pred CcHHHHHHHHHcCCCcccccCCCCCchHHHHHHcCCHHHHHHHHHcCCCCCCcCCC-CCCHHHHHHHcCCHHHHHHHHHc
Confidence 6788899999999998876 789999999999999999999999999998877654 56999999999999999999999
Q ss_pred CC-CCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCCCCcccCcCccC
Q psy903 213 GA-DVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKE 291 (739)
Q Consensus 213 g~-~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~~~~~~~~~~~~ 291 (739)
+. +++..+..|.||||+|+..++.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++.. +..|.
T Consensus 81 ~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~~g~ 159 (223)
T 2f8y_A 81 RATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQ-NNREE 159 (223)
T ss_dssp TTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCC-CTTCC
T ss_pred CCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCc-CCCCc
Confidence 87 88999999999999999999999999999999999999999999999999999999999999999998875 45699
Q ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCCCCCCcCCcHHHHHHhCCchHHHHHHHHcCCCch
Q psy903 292 SALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSV 350 (739)
Q Consensus 292 ~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~L~~~~~~~~ 350 (739)
|||++|+..++.+++++|+++|++++..+..|.||+++|+..++.+++++|+++|....
T Consensus 160 t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~g~~~~ 218 (223)
T 2f8y_A 160 TPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDEYNLVRS 218 (223)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCSSC
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCccccccCCCHHHHHHHhcchHHHHHHHHcCCCcc
Confidence 99999999999999999999999999999999999999999999999999999988643
No 38
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=100.00 E-value=1.1e-36 Score=298.94 Aligned_cols=272 Identities=14% Similarity=0.044 Sum_probs=207.0
Q ss_pred hhcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHHccccccccCCCCCcchhHHHhhccccccccCCC
Q psy903 6 CSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKLATGDG 85 (739)
Q Consensus 6 ~~~g~~~~v~~ll~~g~~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~ 85 (739)
+.....++|++|+++|++++..+..|.|+++ |+.++|++|+++|++++. ++++.|+.....
T Consensus 27 ~~~~~~dlv~~ll~~ga~i~~~~~~g~~~~~-----g~~~~v~~Ll~~g~~~~~-------~~~~~a~~~~~~------- 87 (327)
T 1sw6_A 27 IITFTHDLTSDFLSSPLKIMKALPSPVVNDN-----EQKMKLEAFLQRLLFPEI-------QEMPTSLNNDSS------- 87 (327)
T ss_dssp EEECCTTCCCSTTTSSCCCEECBCCCCCCCH-----HHHHHHHHHHHHHHC-----------------------------
T ss_pred hhhhcCchHHHHhhCCcccccCCCCCCcccC-----chhHHHHHHHHhccCCcc-------ccchHhhhcccc-------
Confidence 3445567899999999999999999999987 999999999999998643 677777653100
Q ss_pred CCCCHHHHHhhhhhhhchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCc-CCCCCCcHHHHHH
Q psy903 86 KLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHE-TTDEGESLLSLAC 164 (739)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~-~~~~g~t~L~~A~ 164 (739)
...........+..+.|+..+..++++.|++.|++++. .+..|.||||+|+
T Consensus 88 ----------------------------~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~g~dvn~~~d~~g~TpLh~Aa 139 (327)
T 1sw6_A 88 ----------------------------NRNSEGGSSNQQQQHVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLT 139 (327)
T ss_dssp --------------------------------------------CHHHHHHHHHHHCTTSCCCSCSCCSTTCCCHHHHHH
T ss_pred ----------------------------cccccccCCccchhHHHHHhhHHHHHHHHHhcCCCcccccCCCCCcHHHHHH
Confidence 00011122233456778888888999999999999999 8999999999999
Q ss_pred HcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCc---HHHHHHHHHCC-CCCCCCCCCCCcHHHHHHh----cCcH
Q psy903 165 SAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGF---IEIVRLLINHG-ADVNGQSSSGNTPLMYACA----GGHE 236 (739)
Q Consensus 165 ~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~---~~~~~~Ll~~g-~~~~~~~~~~~t~L~~A~~----~~~~ 236 (739)
..|+.++|++|+++|++++..+.. |+||||+|+..|+ .++++.|++.+ ++++.+|..|.||||+|+. .|+.
T Consensus 140 ~~g~~~~v~~Ll~~Gad~n~~d~~-g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~ 218 (327)
T 1sw6_A 140 SIANLELVKHLVKHGSNRLYGDNM-GESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCS 218 (327)
T ss_dssp HTTCHHHHHHHHHTTCCTTBCCTT-CCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCH
T ss_pred HcCCHHHHHHHHHcCCCCCCcCCC-CCCHHHHHHHhcccccHHHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccH
Confidence 999999999999999999877654 5799999999998 68888888876 7799999999999999999 8999
Q ss_pred HHHHHHHHC--------------------CCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCCCCcccCcCccCCHHHH
Q psy903 237 AVVRVLLEC--------------------GANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTL 296 (739)
Q Consensus 237 ~~v~~Ll~~--------------------~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~~~~~~~~~~~~~~l~~ 296 (739)
+++++|++. |++++..+..|.||||.|+. +++|++++ ++. .+..|.||||+
T Consensus 219 ~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~------~~~Ll~~~--~n~-~d~~G~TpLh~ 289 (327)
T 1sw6_A 219 AAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLD------LKWIIANM--LNA-QDSNGDTCLNI 289 (327)
T ss_dssp HHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCS------HHHHHHHT--TTC-CCTTSCCHHHH
T ss_pred HHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHH------HHHHHHhC--CCC-CCCCCCCHHHH
Confidence 999999987 89999999999999999985 89999984 444 35569999999
Q ss_pred HHHcCCHHHHHHHHHcCCCCCCCCCcCCcHHHHHHhCC
Q psy903 297 ACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDG 334 (739)
Q Consensus 297 A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~ 334 (739)
|+..|+.+++++|+++|++++.++..|.|||++|+..|
T Consensus 290 A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g 327 (327)
T 1sw6_A 290 AARLGNISIVDALLDYGADPFIANKSGLRPVDFGAGLE 327 (327)
T ss_dssp HHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGGGTCC--
T ss_pred HHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcC
Confidence 99999999999999999999999999999999998654
No 39
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=1.6e-34 Score=282.26 Aligned_cols=274 Identities=22% Similarity=0.251 Sum_probs=225.1
Q ss_pred hhhhhcCCHHHHHHHHHcCCCCcc---------cCCCCCcHHHHHHhcCcHHHHHHHHHccccccccCCCCCcchhHHHh
Q psy903 3 VQACSDGDVKTVKKLLTEGRSVHE---------TTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAA 73 (739)
Q Consensus 3 ~~A~~~g~~~~v~~ll~~g~~~~~---------~~~~g~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~ 73 (739)
+.++..|..+.++.++..+.++.. .+..|.||||.||..|+.++|++|+++|++++..+..|. ||||+|+
T Consensus 3 ~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~-t~L~~A~ 81 (299)
T 1s70_B 3 MADAKQKRNEQLKRWIGSETDLEPPVVKRKKTKVKFDDGAVFLAACSSGDTEEVLRLLERGADINYANVDGL-TALHQAC 81 (299)
T ss_dssp SHHHHHHHHHHHHHHHHTTTSSCCSCCCCSCCCCEECHHHHHHHHHHHTCHHHHHHHHHHCCCTTCBCTTCC-BHHHHHH
T ss_pred hhHHHHHHHHHHHHHHccccccccccccCcccccccCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCC-CHHHHHH
Confidence 457888899999999987655432 245678999999999999999999999999988876664 7766666
Q ss_pred hccccccccCCCCCCCHHHHHhhhhhhhchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCC
Q psy903 74 SSGFGKLATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETT 153 (739)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~ 153 (739)
.. |+.+++++|++.|++++..+
T Consensus 82 ~~----------------------------------------------------------g~~~~v~~Ll~~ga~~~~~~ 103 (299)
T 1s70_B 82 ID----------------------------------------------------------DNVDMVKFLVENGANINQPD 103 (299)
T ss_dssp HT----------------------------------------------------------TCHHHHHHHHHTTCCTTCCC
T ss_pred Hc----------------------------------------------------------CCHHHHHHHHHCCCCCCCCC
Confidence 54 57899999999999999999
Q ss_pred CCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHH-CCCCCCCCCCCCCcHHHHHHh
Q psy903 154 DEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLIN-HGADVNGQSSSGNTPLMYACA 232 (739)
Q Consensus 154 ~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~-~g~~~~~~~~~~~t~L~~A~~ 232 (739)
..|.||||+|+..|+.+++++|+++|++++..+.. |.||||+|+..++.+++++++. .|.+++..+..+.++++.
T Consensus 104 ~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~-g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~--- 179 (299)
T 1s70_B 104 NEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSE-GDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLR--- 179 (299)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT-SCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHH---
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCcCCC-CCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHH---
Confidence 99999999999999999999999999998877654 5699999999999999998886 466554333322333322
Q ss_pred cCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCCCCcccCcCccCCHHHHHHHcCCHHHHHHHHHc
Q psy903 233 GGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSA 312 (739)
Q Consensus 233 ~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~ 312 (739)
.+..++..........+..|.||||+|+..|+.+++++|+++|++++.. +..|.||||+|+..|+.+++++|+++
T Consensus 180 ----~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~-d~~g~tpL~~A~~~~~~~~v~~Ll~~ 254 (299)
T 1s70_B 180 ----DARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIK-DYDGWTPLHAAAHWGKEEACRILVEN 254 (299)
T ss_dssp ----HHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCC-CTTCCCHHHHHHHTTCHHHHHHHHHT
T ss_pred ----HHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCc-CCCCCcHHHHHHhcCCHHHHHHHHHc
Confidence 2233444444555567788999999999999999999999999998875 45699999999999999999999999
Q ss_pred CCCCCCCCCcCCcHHHHHHhCCchHHHHHHHHc
Q psy903 313 GADQEHKTDEMHTALMEASMDGHVEVAKLLLDS 345 (739)
Q Consensus 313 ~~~~~~~~~~~~~~l~~a~~~~~~~~~~~L~~~ 345 (739)
|++++..+..|.||+++|.. +..+.++.+.+.
T Consensus 255 gad~~~~d~~g~t~l~~A~~-~~~~~l~~l~~~ 286 (299)
T 1s70_B 255 LCDMEAVNKVGQTAFDVADE-DILGYLEELQKK 286 (299)
T ss_dssp TCCTTCCCTTSCCTTTSCCS-GGGHHHHHHHHH
T ss_pred CCCCCCcCCCCCCHHHHHHH-HHHHHHHHHHHH
Confidence 99999999999999999965 455666666554
No 40
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=2.1e-33 Score=262.74 Aligned_cols=149 Identities=30% Similarity=0.334 Sum_probs=109.3
Q ss_pred CHHHHHHHHhcCCCC-----CcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCC------------CCCCcHHHHH
Q psy903 135 DVKTVKKLLTEGRSV-----HETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGI------------KGECTPLMEA 197 (739)
Q Consensus 135 ~~~~~~~ll~~~~~~-----~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~------------~~~~t~L~~A 197 (739)
+.+++++|++.|+++ +..+..|.||||+|+..|+.+++++|+++|++++..+. ..|.||||+|
T Consensus 49 ~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A 128 (232)
T 2rfa_A 49 NLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFA 128 (232)
T ss_dssp CHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHH
T ss_pred CHHHHHHHHHcCchhccccccccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHH
Confidence 455556666555544 44555677777777777777777777777776665443 2456888888
Q ss_pred HHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHH----HHHHHCCCCC------CCCCCCCCcHHHHHHhcC
Q psy903 198 ASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVV----RVLLECGANV------EDHNENGHTPLMEAASAG 267 (739)
Q Consensus 198 ~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v----~~Ll~~~~~~------~~~~~~~~t~L~~A~~~~ 267 (739)
+..|+.+++++|+++|++++.+|..|.||||+|+..++.+++ ++|+++|++. +.+|..|.|||++|+..|
T Consensus 129 ~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g 208 (232)
T 2rfa_A 129 ACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEG 208 (232)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHT
T ss_pred HHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcC
Confidence 888888888888888888888888888888888888888777 8888888776 467778888888888888
Q ss_pred ChHHHHHHHHcCCCCc
Q psy903 268 HVGVAKILLEYGAGIN 283 (739)
Q Consensus 268 ~~~ii~~Ll~~~~~~~ 283 (739)
+.+++++|+++|....
T Consensus 209 ~~~~v~~Ll~~g~~~~ 224 (232)
T 2rfa_A 209 NIVMFQHLMQKRKHIA 224 (232)
T ss_dssp CHHHHHHHHHHHHHC-
T ss_pred CHHHHHHHHhcCccch
Confidence 8888888888765543
No 41
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=1.1e-34 Score=271.77 Aligned_cols=212 Identities=24% Similarity=0.255 Sum_probs=174.3
Q ss_pred ccCCCCCcHHHHHHhcCcHHHHHHHHHccc----cccccCCCCCcchhHHHhhccccccccCCCCCCCHHHHHhhhhhhh
Q psy903 26 ETTDEGESLLSLACSAGYYELAQVLLAMHA----NVEDRGIKGECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVS 101 (739)
Q Consensus 26 ~~~~~g~t~L~~A~~~~~~~iv~~Ll~~ga----~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (739)
.+|.+|+||||+|+..|+.+++++|++.++ +++..+..+. ||||+|+
T Consensus 3 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~-t~L~~A~---------------------------- 53 (236)
T 1ikn_D 3 QLTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQ-TPLHLAV---------------------------- 53 (236)
T ss_dssp ----CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCC-CHHHHHH----------------------------
T ss_pred cCCCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCC-CHHHHHH----------------------------
Confidence 578899999999999999999999998876 5666655543 5555555
Q ss_pred chHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCC
Q psy903 102 CALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHAN 181 (739)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~ 181 (739)
..|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|++.+++
T Consensus 54 ------------------------------~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~ 103 (236)
T 1ikn_D 54 ------------------------------ITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTT 103 (236)
T ss_dssp ------------------------------HTTCHHHHHCCCSCCCCSCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTT
T ss_pred ------------------------------HcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccc
Confidence 45578999999999999999999999999999999999999999999875
Q ss_pred c-----cccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCC-CCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCC
Q psy903 182 V-----EDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSS-SGNTPLMYACAGGHEAVVRVLLECGANVEDHNEN 255 (739)
Q Consensus 182 ~-----~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~-~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~ 255 (739)
+ .......|.||||+|+..|+.+++++|+++|++++.++. .|.||||+|+..|+.+++++|+++|++++.+|..
T Consensus 104 ~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~ 183 (236)
T 1ikn_D 104 PHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQ 183 (236)
T ss_dssp TSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTT
T ss_pred hhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccCC
Confidence 3 233445567999999999999999999999999999987 9999999999999999999999999999999999
Q ss_pred CCcHHHHHHhcCChHHHHHHHHcCCCCcc-cCcCccCCHHHH
Q psy903 256 GHTPLMEAASAGHVGVAKILLEYGAGINT-HSNEFKESALTL 296 (739)
Q Consensus 256 ~~t~L~~A~~~~~~~ii~~Ll~~~~~~~~-~~~~~~~~~l~~ 296 (739)
|.|||++|+..|+.+++++|+++|++... ..+..+.++...
T Consensus 184 g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~~~~~~ 225 (236)
T 1ikn_D 184 GYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPESEDEESYDT 225 (236)
T ss_dssp CCCGGGGCTTSSCHHHHHHHHTTSCGGGSSCCCCCTTTCCCC
T ss_pred CCCHHHHHHccCchHHHHHHHHcchhhhhcCCccchHHHHhh
Confidence 99999999999999999999999986552 223334454443
No 42
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=1.9e-32 Score=256.27 Aligned_cols=198 Identities=27% Similarity=0.362 Sum_probs=175.3
Q ss_pred CCchHHHHHHHcCCHHHHHHHHhc-CCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccc----cCCCCCCcHHHH
Q psy903 122 QNERSLVQACSDGDVKTVKKLLTE-GRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVED----RGIKGECTPLME 196 (739)
Q Consensus 122 ~~~~~l~~A~~~~~~~~~~~ll~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~----~~~~~~~t~L~~ 196 (739)
.+.|+|+.|+..|+.+++++|++. |++++..+..|.||||+|+..|+.+++++|++.|+++.. ..+..|.||||+
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~ 81 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHI 81 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHH
Confidence 467999999999999999999998 999999999999999999999999999999999988632 223456799999
Q ss_pred HHHcCcHHHHHHHHHCCCCCCCCCC-------------CCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHH
Q psy903 197 AASSGFIEIVRLLINHGADVNGQSS-------------SGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEA 263 (739)
Q Consensus 197 A~~~~~~~~~~~Ll~~g~~~~~~~~-------------~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A 263 (739)
|+..|+.+++++|+++|++++.++. .|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|
T Consensus 82 A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A 161 (232)
T 2rfa_A 82 AVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHIL 161 (232)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred HHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHH
Confidence 9999999999999999999988765 799999999999999999999999999999999999999999
Q ss_pred HhcCChHHH----HHHHHcCCCCc-----ccCcCccCCHHHHHHHcCCHHHHHHHHHcCCCCCCC
Q psy903 264 ASAGHVGVA----KILLEYGAGIN-----THSNEFKESALTLACYKGHLDMVRFLLSAGADQEHK 319 (739)
Q Consensus 264 ~~~~~~~ii----~~Ll~~~~~~~-----~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~ 319 (739)
+..++.+++ ++|+++|++.. ...+..|.|||++|+..|+.+++++|+++|......
T Consensus 162 ~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~g~~~~~~ 226 (232)
T 2rfa_A 162 ILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQKRKHIAAA 226 (232)
T ss_dssp HTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHC---
T ss_pred HHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHhcCccchhh
Confidence 999999988 99999998764 345667889999999999999999999987665443
No 43
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=2.6e-32 Score=236.91 Aligned_cols=159 Identities=35% Similarity=0.573 Sum_probs=146.3
Q ss_pred hHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHH
Q psy903 125 RSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIE 204 (739)
Q Consensus 125 ~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~ 204 (739)
++|+.|++.|+.++|+.|++.|++++.+|..|.||||+|+..++.+++++|++.|++++..+.. |+||||+|+..|+.+
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~-g~TpLh~A~~~g~~~ 84 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSD-GRTPLHHAAENGHKE 84 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT-SCCHHHHHHHTTCHH
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccC-CCCHHHHHHHcCCHH
Confidence 5699999999999999999999999999999999999999999999999999999999887655 569999999999999
Q ss_pred HHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCCCCcc
Q psy903 205 IVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINT 284 (739)
Q Consensus 205 ~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~~~~~ 284 (739)
++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|.+|.|||++|+..|+.+++++|+++|++++-
T Consensus 85 ~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~ie~ 164 (169)
T 4gpm_A 85 VVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLEH 164 (169)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC------
T ss_pred HHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998754
No 44
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=1.7e-32 Score=238.14 Aligned_cols=155 Identities=30% Similarity=0.467 Sum_probs=85.7
Q ss_pred hhhhhhcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHHccccccccCCCCCcchhHHHhhccccccc
Q psy903 2 LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKLA 81 (739)
Q Consensus 2 L~~A~~~g~~~~v~~ll~~g~~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~~~~~ 81 (739)
|+.||+.|++++|+.||+.|+++|.+|..|+||||+|+..++.+++++|+++|++++..+..|. ||||+|+..
T Consensus 8 L~~Aa~~G~~~~v~~Ll~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~-TpLh~A~~~------ 80 (169)
T 4gpm_A 8 LIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGR-TPLHHAAEN------ 80 (169)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSC-CHHHHHHHT------
T ss_pred HHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCC-CHHHHHHHc------
Confidence 6667777777777777777777776666677777777777777777766666666665554443 444443332
Q ss_pred cCCCCCCCHHHHHhhhhhhhchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHH
Q psy903 82 TGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLS 161 (739)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~ 161 (739)
|+.+++++|++.|++++.+|..|.||||
T Consensus 81 ----------------------------------------------------g~~~~v~~Ll~~gadvn~~d~~G~TpLh 108 (169)
T 4gpm_A 81 ----------------------------------------------------GHKEVVKLLISKGADVNAKDSDGRTPLH 108 (169)
T ss_dssp ----------------------------------------------------TCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred ----------------------------------------------------CCHHHHHHHHHCcCCCCCCCCCCCCHHH
Confidence 2455555555555555555555555555
Q ss_pred HHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCC
Q psy903 162 LACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADV 216 (739)
Q Consensus 162 ~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~ 216 (739)
+|+..|+.++|++|++.|++++..+.. |+|||++|+..|+.+++++|+++|+++
T Consensus 109 ~A~~~g~~~~v~~Ll~~gad~~~~d~~-G~TpL~~A~~~g~~~iv~~Ll~~GA~i 162 (169)
T 4gpm_A 109 HAAENGHKEVVKLLISKGADVNTSDSD-GRTPLDLAREHGNEEVVKLLEKQGGWL 162 (169)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTT-SCCHHHHHHHTTCHHHHHHHHTC----
T ss_pred HHHHcCCHHHHHHHHHcCCCccccCCC-CCCHHHHHHHcCCHHHHHHHHHCCCCc
Confidence 555555555555555555444443322 234444444444444444444444444
No 45
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=7.2e-32 Score=246.11 Aligned_cols=191 Identities=24% Similarity=0.342 Sum_probs=151.0
Q ss_pred CCCCcHHHHHHhcCcHHHHHHHHHccc-cccccCCCCCcchhHHHhhccccccccCCCCCCCHHHHHhhhhhhhchHHHH
Q psy903 29 DEGESLLSLACSAGYYELAQVLLAMHA-NVEDRGIKGECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVSCALDEA 107 (739)
Q Consensus 29 ~~g~t~L~~A~~~~~~~iv~~Ll~~ga-~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (739)
..+.||||.|+..|+.++++.|++.+. +++..+..+. ||||+|+..
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~-t~L~~A~~~-------------------------------- 49 (201)
T 3hra_A 3 TYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGN-TPLNIAVHN-------------------------------- 49 (201)
T ss_dssp CCCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSC-CHHHHHHHH--------------------------------
T ss_pred cccccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCC-CHHHHHHHc--------------------------------
Confidence 356788888888888888888887766 7766665543 555555544
Q ss_pred HHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHh-CCCCccccC
Q psy903 108 AAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLA-MHANVEDRG 186 (739)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~~~~~~~~~ 186 (739)
|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|++ .+.+++..+
T Consensus 50 --------------------------~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~ 103 (201)
T 3hra_A 50 --------------------------NDIEIAKALIDRGADINLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHN 103 (201)
T ss_dssp --------------------------TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCC
T ss_pred --------------------------CCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccCccccccc
Confidence 46788888888888888888888888888888888888888884 444555444
Q ss_pred CCCCCcHHHHHHHcCcHHHHHHHHHCC-CCCCCCCCCCCcHHHHHHhcCc-----HHHHHHHHHCCCCCCCCCCCCCcHH
Q psy903 187 IKGECTPLMEAASSGFIEIVRLLINHG-ADVNGQSSSGNTPLMYACAGGH-----EAVVRVLLECGANVEDHNENGHTPL 260 (739)
Q Consensus 187 ~~~~~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~~~t~L~~A~~~~~-----~~~v~~Ll~~~~~~~~~~~~~~t~L 260 (739)
..|.||||+|+..|+.+++++|+++| ++++.++..|.||||+|+..++ .+++++|+++|++++.+|..|.|||
T Consensus 104 -~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l 182 (201)
T 3hra_A 104 -RYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDNSGRTAM 182 (201)
T ss_dssp -TTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred -CCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCCCccCCCCCCHH
Confidence 34568888888888888888888887 8888888888888888888877 8888888888888888888888888
Q ss_pred HHHHhcCChHHHHHHHHcC
Q psy903 261 MEAASAGHVGVAKILLEYG 279 (739)
Q Consensus 261 ~~A~~~~~~~ii~~Ll~~~ 279 (739)
++|+..|+.+++++|+++|
T Consensus 183 ~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 183 DYANQKGYTEISKILAQYN 201 (201)
T ss_dssp HHHHHHTCHHHHHHHHTCC
T ss_pred HHHHHcCCHhHHHHHHhcC
Confidence 8888888888888888765
No 46
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=1.1e-33 Score=265.18 Aligned_cols=205 Identities=21% Similarity=0.230 Sum_probs=182.5
Q ss_pred ChhhhhhcCCHHHHHHHHHcCC----CCcccCCCCCcHHHHHHhcCcHHHHHHHHHccccccccCCCCCcchhHHHhhcc
Q psy903 1 SLVQACSDGDVKTVKKLLTEGR----SVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSG 76 (739)
Q Consensus 1 ~L~~A~~~g~~~~v~~ll~~g~----~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~ 76 (739)
|||.|+..|+.++|++|++.+. +++.++..|+||||+|+..|+.+++++|+++|++++..+..+. ||||+|+..|
T Consensus 11 ~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~-t~L~~A~~~~ 89 (236)
T 1ikn_D 11 FLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGN-TPLHLACEQG 89 (236)
T ss_dssp TTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCC-CHHHHHHHHT
T ss_pred hhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCC-CHHHHHHHcC
Confidence 7999999999999999998665 7899999999999999999999999999999999998877665 7777766554
Q ss_pred ccccccCCCCCCCHHHHHhhhhhhhchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCC------CC
Q psy903 77 FGKLATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRS------VH 150 (739)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~------~~ 150 (739)
+.+++++|++.|.+ ++
T Consensus 90 ----------------------------------------------------------~~~~v~~Ll~~~~~~~~~~~~~ 111 (236)
T 1ikn_D 90 ----------------------------------------------------------CLASVGVLTQSCTTPHLHSILK 111 (236)
T ss_dssp ----------------------------------------------------------CHHHHHHHHHSTTTTSSSCGGG
T ss_pred ----------------------------------------------------------CHHHHHHHHhcccchhHHHHhh
Confidence 78899999998875 46
Q ss_pred cCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHH
Q psy903 151 ETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYA 230 (739)
Q Consensus 151 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A 230 (739)
..+..|.||||+|+..|+.+++++|++.|++++..+...|.||||+|+..|+.+++++|+++|++++.++..|.||||+|
T Consensus 112 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A 191 (236)
T 1ikn_D 112 ATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLT 191 (236)
T ss_dssp CCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGC
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCCCHHHHH
Confidence 67888999999999999999999999999999988875678999999999999999999999999999999999999999
Q ss_pred HhcCcHHHHHHHHHCCCCCC--CCCCCCCcHHHHHH
Q psy903 231 CAGGHEAVVRVLLECGANVE--DHNENGHTPLMEAA 264 (739)
Q Consensus 231 ~~~~~~~~v~~Ll~~~~~~~--~~~~~~~t~L~~A~ 264 (739)
+..|+.+++++|+++|++.. ..+..+.||...+.
T Consensus 192 ~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~~~~~~~~ 227 (236)
T 1ikn_D 192 WGRPSTRIQQQLGQLTLENLQMLPESEDEESYDTES 227 (236)
T ss_dssp TTSSCHHHHHHHHTTSCGGGSSCCCCCTTTCCCCC-
T ss_pred HccCchHHHHHHHHcchhhhhcCCccchHHHHhhhc
Confidence 99999999999999999765 67777887766543
No 47
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=100.00 E-value=2.7e-34 Score=281.90 Aligned_cols=259 Identities=15% Similarity=0.139 Sum_probs=200.5
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccC----------------CCCC
Q psy903 127 LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRG----------------IKGE 190 (739)
Q Consensus 127 l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~----------------~~~~ 190 (739)
...++.....+++++|+++|++++..+..|.++++ |+.+++++|+++|++++... ....
T Consensus 23 ~~~~~~~~~~dlv~~ll~~ga~i~~~~~~g~~~~~-----g~~~~v~~Ll~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~ 97 (327)
T 1sw6_A 23 TAGPIITFTHDLTSDFLSSPLKIMKALPSPVVNDN-----EQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSN 97 (327)
T ss_dssp --CCEEECCTTCCCSTTTSSCCCEECBCCCCCCCH-----HHHHHHHHHHHHHHC-------------------------
T ss_pred cccchhhhcCchHHHHhhCCcccccCCCCCCcccC-----chhHHHHHHHHhccCCccccchHhhhcccccccccccCCc
Confidence 33344456678899999999999999999999987 99999999999997765411 0111
Q ss_pred CcHHHHHHHcCcHHHHHHHHHCCCCCCC-CCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCC-
Q psy903 191 CTPLMEAASSGFIEIVRLLINHGADVNG-QSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGH- 268 (739)
Q Consensus 191 ~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~- 268 (739)
.+.+|.|+..+..+++++|++.|++++. +|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+
T Consensus 98 ~~~~~~a~~~~~~~~~~~l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~ 177 (327)
T 1sw6_A 98 QQQQHVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNN 177 (327)
T ss_dssp ------CHHHHHHHHHHHCTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHH
T ss_pred cchhHHHHHhhHHHHHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhccc
Confidence 2345778888888999999999999999 89999999999999999999999999999999999999999999999998
Q ss_pred --hHHHHHHHHcC-CCCcccCcCccCCHHHHHHH----cCCHHHHHHHHHc--------------------CCCCCCCCC
Q psy903 269 --VGVAKILLEYG-AGINTHSNEFKESALTLACY----KGHLDMVRFLLSA--------------------GADQEHKTD 321 (739)
Q Consensus 269 --~~ii~~Ll~~~-~~~~~~~~~~~~~~l~~A~~----~~~~~~v~~Ll~~--------------------~~~~~~~~~ 321 (739)
.++++.|++++ .+++. .+..|.||||+|+. .|+.+++++|++. |++++..+.
T Consensus 178 ~~~~~~~~ll~~~~~~~~~-~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~ 256 (327)
T 1sw6_A 178 YDSGTFEALLDYLYPCLIL-EDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNG 256 (327)
T ss_dssp HHTTCHHHHHHHHGGGGGE-ECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC-------------
T ss_pred ccHHHHHHHHHhhhccccC-CCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccc
Confidence 78888888876 44554 45569999999999 8999999999987 788888888
Q ss_pred cCCcHHHHHHhCCchHHHHHHHHcCCCchhhhcccCCCCCCCCCCCCCcccccchHHHHHHhcCCHHHHHHHHHCCCCCc
Q psy903 322 EMHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRSVH 401 (739)
Q Consensus 322 ~~~~~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~ 401 (739)
.|.|||+.|+. +++|++. +++
T Consensus 257 ~g~t~L~~a~~------~~~Ll~~-----------------------------------------------------~~n 277 (327)
T 1sw6_A 257 ERKDSILENLD------LKWIIAN-----------------------------------------------------MLN 277 (327)
T ss_dssp ---CHHHHHCS------HHHHHHH-----------------------------------------------------TTT
T ss_pred cCCChhHHHHH------HHHHHHh-----------------------------------------------------CCC
Confidence 88899888764 5555553 255
Q ss_pred cCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCcccccCCCCCcHHHHHHHc
Q psy903 402 ETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASS 451 (739)
Q Consensus 402 ~~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~ 451 (739)
.++..|.||||+|+..++.+++++|+++|++++..+..+ .||||+|+..
T Consensus 278 ~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G-~TpL~~A~~~ 326 (327)
T 1sw6_A 278 AQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSG-LRPVDFGAGL 326 (327)
T ss_dssp CCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTS-CCGGGGTCC-
T ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCC-CCHHHHHHhc
Confidence 678889999999999999999999999999988887776 8999988754
No 48
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=100.00 E-value=1.3e-32 Score=261.49 Aligned_cols=197 Identities=26% Similarity=0.250 Sum_probs=165.4
Q ss_pred CCCcHHHHHHhcCcHH----HHHHHHHccccccc----cCCCCCcchhHHHhhccccccccCCCCCCCHHHHHhhhhhhh
Q psy903 30 EGESLLSLACSAGYYE----LAQVLLAMHANVED----RGIKGECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVS 101 (739)
Q Consensus 30 ~g~t~L~~A~~~~~~~----iv~~Ll~~ga~~~~----~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (739)
.|+||||.|+..|+.+ ++++|+++|++++. .+..|. ||||+|+...
T Consensus 1 ~G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~-t~L~~A~~~~------------------------- 54 (256)
T 2etb_A 1 FDRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGK-TCLMKAVLNL------------------------- 54 (256)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTB-CHHHHHHHTC-------------------------
T ss_pred CCccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCC-CHHHHHHHcc-------------------------
Confidence 4899999999999997 66788889999987 565554 7777777650
Q ss_pred chHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCc-----------CCCCCCcHHHHHHHcCcHH
Q psy903 102 CALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHE-----------TTDEGESLLSLACSAGYYE 170 (739)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~-----------~~~~g~t~L~~A~~~~~~~ 170 (739)
..|+.+++++|++.|++++. .+..|.||||+|+..|+.+
T Consensus 55 ------------------------------~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~ 104 (256)
T 2etb_A 55 ------------------------------QDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQ 104 (256)
T ss_dssp ------------------------------BTTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHH
T ss_pred ------------------------------ccchHHHHHHHHhcCCcccchhhhcccccccccccCCCHHHHHHHcCCHH
Confidence 01466788888888776653 3367999999999999999
Q ss_pred HHHHHHhCCCCccccCCCC------------CCcHHHHHHHcCcHHHHHHHHH---CCCCCCCCCCCCCcHHHHHHh--c
Q psy903 171 LAQVLLAMHANVEDRGIKG------------ECTPLMEAASSGFIEIVRLLIN---HGADVNGQSSSGNTPLMYACA--G 233 (739)
Q Consensus 171 ~v~~Ll~~~~~~~~~~~~~------------~~t~L~~A~~~~~~~~~~~Ll~---~g~~~~~~~~~~~t~L~~A~~--~ 233 (739)
++++|+++|++++..+... |.||||+|+..|+.+++++|++ +|++++.+|..|+||||+|+. .
T Consensus 105 ~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~ 184 (256)
T 2etb_A 105 CVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIAD 184 (256)
T ss_dssp HHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCC
T ss_pred HHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCccCCCCCCHHHHHHHccc
Confidence 9999999999988777652 6799999999999999999999 899999999999999999998 7
Q ss_pred CcHH-------HHHHHHHCCCCC-------CCCCCCCCcHHHHHHhcCChHHHHHHHHcCCCC
Q psy903 234 GHEA-------VVRVLLECGANV-------EDHNENGHTPLMEAASAGHVGVAKILLEYGAGI 282 (739)
Q Consensus 234 ~~~~-------~v~~Ll~~~~~~-------~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~~~ 282 (739)
++.+ ++++|+++|+++ +.+|..|.||||+|+..|+.+++++|+++|...
T Consensus 185 ~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~ 247 (256)
T 2etb_A 185 NSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQREFSG 247 (256)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCC
Confidence 7888 999999999888 888999999999999999999999999887653
No 49
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.98 E-value=2.2e-32 Score=262.43 Aligned_cols=206 Identities=24% Similarity=0.256 Sum_probs=148.8
Q ss_pred cCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHHcc----ccccc----cCCCCCcchhHHHhhccccccccCCCCCCCHH
Q psy903 20 EGRSVHETTDEGESLLSLACSAGYYELAQVLLAMH----ANVED----RGIKGECTPLMEAASSGFGKLATGDGKLADPE 91 (739)
Q Consensus 20 ~g~~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~g----a~~~~----~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~~~ 91 (739)
.|+..+..|..|+||||+|+..|+.++|+.|++.+ ++++. .+..+ .||||+|+...
T Consensus 2 ~~a~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g-~tpL~~A~~~~--------------- 65 (273)
T 2pnn_A 2 VSAGEKPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETG-KTCLLKAMLNL--------------- 65 (273)
T ss_dssp ---------CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTC-CCHHHHHHHSC---------------
T ss_pred CcccCCCCCcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCC-CCHHHHHHHHH---------------
Confidence 35566778999999999999999999999999854 44432 13333 36666666531
Q ss_pred HHHhhhhhhhchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCC-----------CcCCCCCCcHH
Q psy903 92 VLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSV-----------HETTDEGESLL 160 (739)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~-----------~~~~~~g~t~L 160 (739)
..|+.+++++|++.|++. ...+..|.|||
T Consensus 66 ----------------------------------------~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL 105 (273)
T 2pnn_A 66 ----------------------------------------HNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTAL 105 (273)
T ss_dssp ----------------------------------------BTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHH
T ss_pred ----------------------------------------hcCChHHHHHHHHhhccccchhHHhhcccccccCCCCCHH
Confidence 125667777777766432 22556788899
Q ss_pred HHHHHcCcHHHHHHHHhCCCCccccCCC-------------CCCcHHHHHHHcCcHHHHHHHHH---CCCCCCCCCCCCC
Q psy903 161 SLACSAGYYELAQVLLAMHANVEDRGIK-------------GECTPLMEAASSGFIEIVRLLIN---HGADVNGQSSSGN 224 (739)
Q Consensus 161 ~~A~~~~~~~~v~~Ll~~~~~~~~~~~~-------------~~~t~L~~A~~~~~~~~~~~Ll~---~g~~~~~~~~~~~ 224 (739)
|+|+..|+.+++++|+++|++++..+.. .|.||||+|+..|+.+++++|++ +|++++.+|..|.
T Consensus 106 ~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~ 185 (273)
T 2pnn_A 106 HIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGN 185 (273)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSC
T ss_pred HHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCCCC
Confidence 9999889999999999888888777652 46688888888888888888888 7888888888888
Q ss_pred cHHHHHHhcCc---------HHHHHHHHHCCCCCC-------CCCCCCCcHHHHHHhcCChHHHHHHHHcCCC
Q psy903 225 TPLMYACAGGH---------EAVVRVLLECGANVE-------DHNENGHTPLMEAASAGHVGVAKILLEYGAG 281 (739)
Q Consensus 225 t~L~~A~~~~~---------~~~v~~Ll~~~~~~~-------~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~~ 281 (739)
||||+|+..|+ .+++++|+++|++++ .+|..|.||||+|+..|+.+++++|+++|+.
T Consensus 186 tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~ 258 (273)
T 2pnn_A 186 TVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQREIH 258 (273)
T ss_dssp CHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTC
T ss_pred cHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHhChHHHHHHHHHCCCC
Confidence 88888888776 678888888877775 3777788888888888888888888887773
No 50
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.98 E-value=1.3e-30 Score=237.64 Aligned_cols=191 Identities=26% Similarity=0.394 Sum_probs=146.2
Q ss_pred CCCchHHHHHHHcCCHHHHHHHHhcCC-CCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHH
Q psy903 121 PQNERSLVQACSDGDVKTVKKLLTEGR-SVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAAS 199 (739)
Q Consensus 121 ~~~~~~l~~A~~~~~~~~~~~ll~~~~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~ 199 (739)
..+.++|+.|+..|+.+.++.|++.+. +++..+..|.||||+|+..|+.+++++|++.|++++..+.. |.||||+|+.
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~-g~t~l~~A~~ 81 (201)
T 3hra_A 3 TYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSI-SDSPYLYAGA 81 (201)
T ss_dssp CCCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT-SCCHHHHHHH
T ss_pred cccccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCC-CCCHHHHHHH
Confidence 346678888888888888888887765 77778888888888888888888888888888877766544 4588888888
Q ss_pred cCcHHHHHHHH-HCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCC-CCCCCCCCCCCcHHHHHHhcCC-----hHHH
Q psy903 200 SGFIEIVRLLI-NHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECG-ANVEDHNENGHTPLMEAASAGH-----VGVA 272 (739)
Q Consensus 200 ~~~~~~~~~Ll-~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~-~~~~~~~~~~~t~L~~A~~~~~-----~~ii 272 (739)
.|+.+++++|+ ..+++++..+..|.||||+|+..|+.+++++|+++| ++++.++..|.||||+|+..++ .+++
T Consensus 82 ~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v 161 (201)
T 3hra_A 82 QGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIV 161 (201)
T ss_dssp TTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHH
T ss_pred cCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHH
Confidence 88888888888 556677778888888888888888888888888877 7777788888888888887776 7777
Q ss_pred HHHHHcCCCCcccCcCccCCHHHHHHHcCCHHHHHHHHHcC
Q psy903 273 KILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAG 313 (739)
Q Consensus 273 ~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~ 313 (739)
++|+++|++++.. +..|.|||++|+..|+.+++++|+++|
T Consensus 162 ~~Ll~~ga~~~~~-~~~g~t~l~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 162 KLLMENGADQSIK-DNSGRTAMDYANQKGYTEISKILAQYN 201 (201)
T ss_dssp HHHHHTTCCTTCC-CTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred HHHHHCCCCCCcc-CCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence 7777777776654 344777777777777777777777654
No 51
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.97 E-value=1.9e-31 Score=253.35 Aligned_cols=192 Identities=23% Similarity=0.272 Sum_probs=153.7
Q ss_pred CchHHHHHHHcCCHH----HHHHHHhcCCCCCc----CCCCCCcHHHHHHHc---CcHHHHHHHHhCCCCccccC-----
Q psy903 123 NERSLVQACSDGDVK----TVKKLLTEGRSVHE----TTDEGESLLSLACSA---GYYELAQVLLAMHANVEDRG----- 186 (739)
Q Consensus 123 ~~~~l~~A~~~~~~~----~~~~ll~~~~~~~~----~~~~g~t~L~~A~~~---~~~~~v~~Ll~~~~~~~~~~----- 186 (739)
+.|+|+.|+..|+.+ ++++|++.|++++. .+..|.||||+|+.. |+.+++++|++.|++++...
T Consensus 2 G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~ 81 (256)
T 2etb_A 2 DRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNA 81 (256)
T ss_dssp CHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGC
T ss_pred CccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhccc
Confidence 678999999999997 66777788999998 899999999999999 99999999999987765332
Q ss_pred -----CCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCC-------------CCcHHHHHHhcCcHHHHHHHHH---C
Q psy903 187 -----IKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSS-------------GNTPLMYACAGGHEAVVRVLLE---C 245 (739)
Q Consensus 187 -----~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~-------------~~t~L~~A~~~~~~~~v~~Ll~---~ 245 (739)
+..|.||||+|+..|+.+++++|+++|++++.++.. |.||||+|+..|+.+++++|++ +
T Consensus 82 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ 161 (256)
T 2etb_A 82 QCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQ 161 (256)
T ss_dssp CCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSC
T ss_pred ccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccc
Confidence 244679999999999999999999999999888876 8899999999999999999998 8
Q ss_pred CCCCCCCCCCCCcHHHHHHh--cCChH-------HHHHHHHcCCCCc------ccCcCccCCHHHHHHHcCCHHHHHHHH
Q psy903 246 GANVEDHNENGHTPLMEAAS--AGHVG-------VAKILLEYGAGIN------THSNEFKESALTLACYKGHLDMVRFLL 310 (739)
Q Consensus 246 ~~~~~~~~~~~~t~L~~A~~--~~~~~-------ii~~Ll~~~~~~~------~~~~~~~~~~l~~A~~~~~~~~v~~Ll 310 (739)
|++++.+|..|.||||+|+. .++.+ ++++|+++|++++ ...+..|.||||+|+..|+.+++++|+
T Consensus 162 ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll 241 (256)
T 2etb_A 162 PASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHIL 241 (256)
T ss_dssp CCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred CCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHHHhCCHHHHHHHH
Confidence 88888888888899998888 67777 6677766666552 123344566666666666666666666
Q ss_pred HcCC
Q psy903 311 SAGA 314 (739)
Q Consensus 311 ~~~~ 314 (739)
++|.
T Consensus 242 ~~g~ 245 (256)
T 2etb_A 242 QREF 245 (256)
T ss_dssp HHHH
T ss_pred hCCC
Confidence 5543
No 52
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.97 E-value=2.2e-31 Score=255.52 Aligned_cols=210 Identities=22% Similarity=0.342 Sum_probs=164.9
Q ss_pred CCCCCCCchHHHHHHHcCCHHHHHHHHh----cCCCCC----cCCCCCCcHHHHHHHc---CcHHHHHHHHhCCCCcc--
Q psy903 117 ENPRPQNERSLVQACSDGDVKTVKKLLT----EGRSVH----ETTDEGESLLSLACSA---GYYELAQVLLAMHANVE-- 183 (739)
Q Consensus 117 ~~~~~~~~~~l~~A~~~~~~~~~~~ll~----~~~~~~----~~~~~g~t~L~~A~~~---~~~~~v~~Ll~~~~~~~-- 183 (739)
...+..+.|+|+.|+..|+.++++.|++ .+.+++ ..+..|.||||+|+.. |+.+++++|++.|+++.
T Consensus 7 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~ 86 (273)
T 2pnn_A 7 KPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSL 86 (273)
T ss_dssp ----CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCH
T ss_pred CCCCcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccch
Confidence 3456678999999999999998888886 566665 3577899999999986 99999999999886532
Q ss_pred -----c--c-CCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCC--------------CCCcHHHHHHhcCcHHHHHH
Q psy903 184 -----D--R-GIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSS--------------SGNTPLMYACAGGHEAVVRV 241 (739)
Q Consensus 184 -----~--~-~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~--------------~~~t~L~~A~~~~~~~~v~~ 241 (739)
. . .+..|.||||+|+..|+.+++++|+++|++++.++. .|.||||+|+..|+.+++++
T Consensus 87 ~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~ 166 (273)
T 2pnn_A 87 KQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKF 166 (273)
T ss_dssp HHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHH
T ss_pred hHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHH
Confidence 1 1 224567999999999999999999999999998886 79999999999999999999
Q ss_pred HHH---CCCCCCCCCCCCCcHHHHHHhcCC---------hHHHHHHHHcCCCCcc------cCcCccCCHHHHHHHcCCH
Q psy903 242 LLE---CGANVEDHNENGHTPLMEAASAGH---------VGVAKILLEYGAGINT------HSNEFKESALTLACYKGHL 303 (739)
Q Consensus 242 Ll~---~~~~~~~~~~~~~t~L~~A~~~~~---------~~ii~~Ll~~~~~~~~------~~~~~~~~~l~~A~~~~~~ 303 (739)
|++ +|++++.+|..|.||||+|+..|+ .+++++|+++|++++. ..+..|.||||+|+..|+.
T Consensus 167 Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~ 246 (273)
T 2pnn_A 167 LLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKI 246 (273)
T ss_dssp HHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCH
T ss_pred HHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHhChH
Confidence 999 899999999999999999999887 7889999988887763 3566688999999999999
Q ss_pred HHHHHHHHcCC-CCCCCCCcCCcH
Q psy903 304 DMVRFLLSAGA-DQEHKTDEMHTA 326 (739)
Q Consensus 304 ~~v~~Ll~~~~-~~~~~~~~~~~~ 326 (739)
+++++|+++|+ ++......+.+|
T Consensus 247 ~iv~~Ll~~ga~dp~~~~~~~~~~ 270 (273)
T 2pnn_A 247 GVLAYILQREIHEPECRHAAAHHH 270 (273)
T ss_dssp HHHHHHHHHHTC------------
T ss_pred HHHHHHHHCCCCCchhhhhhhhhc
Confidence 99999998888 666555544433
No 53
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.97 E-value=1.1e-30 Score=248.98 Aligned_cols=202 Identities=24% Similarity=0.210 Sum_probs=162.9
Q ss_pred CCCCCcHHHHHHhcCcHHH----HHHHHHccccccccCC---CCCcchhHHHhhccccccccCCCCCCCHHHHHhhhhhh
Q psy903 28 TDEGESLLSLACSAGYYEL----AQVLLAMHANVEDRGI---KGECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSV 100 (739)
Q Consensus 28 ~~~g~t~L~~A~~~~~~~i----v~~Ll~~ga~~~~~~~---~~~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (739)
+..|+||||.|+..|+.+. +++|++.|++++..+. ..|.||||+|+...
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~------------------------ 57 (260)
T 3jxi_A 2 KVFNRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNL------------------------ 57 (260)
T ss_dssp CCCCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSC------------------------
T ss_pred ccchHHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHh------------------------
Confidence 3568999999999999995 5555559999987662 22348888777320
Q ss_pred hchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCC-----------CCCcCCCCCCcHHHHHHHcCcH
Q psy903 101 SCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGR-----------SVHETTDEGESLLSLACSAGYY 169 (739)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~-----------~~~~~~~~g~t~L~~A~~~~~~ 169 (739)
..|+.+++++|++.|+ ..+..+..|.||||+|+..|+.
T Consensus 58 -------------------------------~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~ 106 (260)
T 3jxi_A 58 -------------------------------SAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCK 106 (260)
T ss_dssp -------------------------------BTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCH
T ss_pred -------------------------------hcCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHcCCH
Confidence 2345666666766553 3445566899999999999999
Q ss_pred HHHHHHHhCCCCccccCC-------------CCCCcHHHHHHHcCcHHHHHHHHH---CCCCCCCCCCCCCcHHHHHHhc
Q psy903 170 ELAQVLLAMHANVEDRGI-------------KGECTPLMEAASSGFIEIVRLLIN---HGADVNGQSSSGNTPLMYACAG 233 (739)
Q Consensus 170 ~~v~~Ll~~~~~~~~~~~-------------~~~~t~L~~A~~~~~~~~~~~Ll~---~g~~~~~~~~~~~t~L~~A~~~ 233 (739)
++|++|++.|++++..+. ..|.||||+|+..|+.+++++|++ +|++++.+|..|+||||+|+..
T Consensus 107 ~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~ 186 (260)
T 3jxi_A 107 HYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAI 186 (260)
T ss_dssp HHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHH
T ss_pred HHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCcccCCCCCcHHHHHHHh
Confidence 999999999999887764 456799999999999999999999 8999999999999999999987
Q ss_pred Cc---------HHHHHHHHHCCCCC-------CCCCCCCCcHHHHHHhcCChHHHHHHHHcCCCCcc
Q psy903 234 GH---------EAVVRVLLECGANV-------EDHNENGHTPLMEAASAGHVGVAKILLEYGAGINT 284 (739)
Q Consensus 234 ~~---------~~~v~~Ll~~~~~~-------~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~~~~~ 284 (739)
++ .+++++|+++|+++ +..|..|.||||+|+..|+.+++++|+++|+....
T Consensus 187 ~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~ 253 (260)
T 3jxi_A 187 ADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQHIIRREIADAA 253 (260)
T ss_dssp CCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHHHHHC
T ss_pred ccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcCCHHHHHHHHHhCCCccc
Confidence 77 68999999999887 67889999999999999999999999988765443
No 54
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.97 E-value=2.6e-30 Score=246.82 Aligned_cols=143 Identities=29% Similarity=0.421 Sum_probs=79.5
Q ss_pred CHHHHHHHHhcCC-CCCcCCCCCCcHHHHHH-----HcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHH
Q psy903 135 DVKTVKKLLTEGR-SVHETTDEGESLLSLAC-----SAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRL 208 (739)
Q Consensus 135 ~~~~~~~ll~~~~-~~~~~~~~g~t~L~~A~-----~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~ 208 (739)
+.+++++|++.|+ +++..+..|.||||+|+ ..++.+++++|++.|...+..+ ..|.||||+|+..|+.+++++
T Consensus 123 ~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~-~~g~tpLh~A~~~g~~~~v~~ 201 (276)
T 4hbd_A 123 NFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKAS-QAGQTALMLAVSHGRVDVVKA 201 (276)
T ss_dssp CHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCT-TTCCCHHHHHHHTTCHHHHHH
T ss_pred CHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccC-CCCCCHHHHHHHcCCHHHHHH
Confidence 3444555555544 45555555555555555 3345555555555554443332 223455555555555555556
Q ss_pred HHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHH-CCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHc
Q psy903 209 LINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLE-CGANVEDHNENGHTPLMEAASAGHVGVAKILLEY 278 (739)
Q Consensus 209 Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~-~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~ 278 (739)
|+++|++++.+|..|.||||+|+..|+.+++++|++ .|++++.+|..|.|||++|+..|+.+++++|+++
T Consensus 202 Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ 272 (276)
T 4hbd_A 202 LLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVALDAGQSEIASMLYSR 272 (276)
T ss_dssp HHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHH
T ss_pred HHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHHHHHcCCHHHHHHHHhc
Confidence 656666666666666666666666666666666665 5666666666666666666666666666666654
No 55
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.96 E-value=6.8e-30 Score=243.39 Aligned_cols=196 Identities=23% Similarity=0.265 Sum_probs=152.4
Q ss_pred CCCchHHHHHHHcCCHHHH----HHHHhcCCCCCcCC----CCCCcHHHHHH---HcCcHHHHHHHHhCCCCccc-----
Q psy903 121 PQNERSLVQACSDGDVKTV----KKLLTEGRSVHETT----DEGESLLSLAC---SAGYYELAQVLLAMHANVED----- 184 (739)
Q Consensus 121 ~~~~~~l~~A~~~~~~~~~----~~ll~~~~~~~~~~----~~g~t~L~~A~---~~~~~~~v~~Ll~~~~~~~~----- 184 (739)
..+.++|+.|+..|+.+.+ ++|++.|.+++..+ ..|.||||+|+ ..|+.+++++|++.|+++..
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~ 82 (260)
T 3jxi_A 3 VFNRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFI 82 (260)
T ss_dssp CCCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHH
T ss_pred cchHHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhh
Confidence 4578899999999999954 44445899888766 66999999999 67999999999998754221
Q ss_pred -----cCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCC--------------CCCCcHHHHHHhcCcHHHHHHHHH-
Q psy903 185 -----RGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQS--------------SSGNTPLMYACAGGHEAVVRVLLE- 244 (739)
Q Consensus 185 -----~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~--------------~~~~t~L~~A~~~~~~~~v~~Ll~- 244 (739)
..+..|+||||+|+..|+.+++++|+++|++++.++ ..|.||||+|+..|+.+++++|++
T Consensus 83 ~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~ 162 (260)
T 3jxi_A 83 NSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTEN 162 (260)
T ss_dssp TCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHC
T ss_pred cccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhc
Confidence 112246799999999999999999999999998888 678899999999999999999998
Q ss_pred --CCCCCCCCCCCCCcHHHHHHhcCC---------hHHHHHHHHcCCCCc------ccCcCccCCHHHHHHHcCCHHHHH
Q psy903 245 --CGANVEDHNENGHTPLMEAASAGH---------VGVAKILLEYGAGIN------THSNEFKESALTLACYKGHLDMVR 307 (739)
Q Consensus 245 --~~~~~~~~~~~~~t~L~~A~~~~~---------~~ii~~Ll~~~~~~~------~~~~~~~~~~l~~A~~~~~~~~v~ 307 (739)
+|++++.+|..|.||||+|+..++ .+++++|+++|++++ ...+..|.||||+|+..|+.++++
T Consensus 163 ~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~ 242 (260)
T 3jxi_A 163 GHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQ 242 (260)
T ss_dssp SSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred cccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcCCHHHHH
Confidence 888888888888999999887776 577777777776653 123445666777777777777777
Q ss_pred HHHHcCCCC
Q psy903 308 FLLSAGADQ 316 (739)
Q Consensus 308 ~Ll~~~~~~ 316 (739)
+|+++|.+.
T Consensus 243 ~Ll~~g~~~ 251 (260)
T 3jxi_A 243 HIIRREIAD 251 (260)
T ss_dssp HHHHHHHHH
T ss_pred HHHHhCCCc
Confidence 776665443
No 56
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.96 E-value=2.4e-28 Score=214.86 Aligned_cols=161 Identities=33% Similarity=0.452 Sum_probs=146.4
Q ss_pred CCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHH
Q psy903 118 NPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEA 197 (739)
Q Consensus 118 ~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A 197 (739)
.+.....++|+.|+..|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|+++|++++..+.. |.||||+|
T Consensus 9 ~~~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~-g~t~L~~A 87 (169)
T 2y1l_E 9 HHGSDLGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHA-GMTPLRLA 87 (169)
T ss_dssp ----CHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT-SCCHHHHH
T ss_pred cCCCcccchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCC-CCCHHHHH
Confidence 44556788999999999999999999999999999999999999999999999999999999998877654 46999999
Q ss_pred HHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHH
Q psy903 198 ASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLE 277 (739)
Q Consensus 198 ~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~ 277 (739)
+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.|||++|+..|+.+++++|++
T Consensus 88 ~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~ 167 (169)
T 2y1l_E 88 ALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 167 (169)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHT
T ss_pred HHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cC
Q psy903 278 YG 279 (739)
Q Consensus 278 ~~ 279 (739)
+|
T Consensus 168 ~G 169 (169)
T 2y1l_E 168 LN 169 (169)
T ss_dssp C-
T ss_pred cC
Confidence 75
No 57
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.96 E-value=8.5e-29 Score=223.29 Aligned_cols=174 Identities=29% Similarity=0.395 Sum_probs=122.7
Q ss_pred CHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHHccccccccCCCCCcchhHHHhhccccccccCCCCCCC
Q psy903 10 DVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKLATGDGKLAD 89 (739)
Q Consensus 10 ~~~~v~~ll~~g~~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~ 89 (739)
+.+.++..++ ..+|.+|..|+||||+|+..|+.+++++|+++|++++..+..+. ||||+|+..
T Consensus 16 ~~~~i~~~~~--~~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~-t~L~~A~~~-------------- 78 (192)
T 2rfm_A 16 DEKSINQNLD--FLRNYRDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGS-TALIWAVKN-------------- 78 (192)
T ss_dssp SHHHHHHTHH--HHHTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSC-CHHHHHHHT--------------
T ss_pred hhhhhhhhhH--HHHhCcCCCCCCHHHHHHHcCCHHHHHHHHHhccccccccccCc-cHHHHHHHc--------------
Confidence 3344444443 23567888999999999999999999999999998877665554 555555543
Q ss_pred HHHHHhhhhhhhchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCcH
Q psy903 90 PEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYY 169 (739)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~ 169 (739)
|+.+++++|++.|++++..+..|.||||+|+..|+.
T Consensus 79 --------------------------------------------~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 114 (192)
T 2rfm_A 79 --------------------------------------------NRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFGYS 114 (192)
T ss_dssp --------------------------------------------TCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCH
T ss_pred --------------------------------------------CCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCH
Confidence 467777888887877777777777777777777777
Q ss_pred HHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHC
Q psy903 170 ELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLEC 245 (739)
Q Consensus 170 ~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~ 245 (739)
+++++|++.|++++..+.. |.||||+|+..|+.+++++|+++|++++.+|..|.|||++|+..|+.+++++|+++
T Consensus 115 ~~v~~Ll~~g~~~~~~~~~-g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 189 (192)
T 2rfm_A 115 EMSYFLLEHGANVNDRNLE-GETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQEVIKIFTEV 189 (192)
T ss_dssp HHHHHHHHTTCCSSCCCTT-CCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCCCCCC-CCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCcHHHHHHHHhc
Confidence 7777777777666655433 34677777766666677666666666666666666666666666666666666654
No 58
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.96 E-value=4.4e-29 Score=238.26 Aligned_cols=176 Identities=27% Similarity=0.375 Sum_probs=141.9
Q ss_pred HHHHHHHHhcCCC--CCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCC-CccccCCCCCCcHHHHHH-----HcCcHHHHH
Q psy903 136 VKTVKKLLTEGRS--VHETTDEGESLLSLACSAGYYELAQVLLAMHA-NVEDRGIKGECTPLMEAA-----SSGFIEIVR 207 (739)
Q Consensus 136 ~~~~~~ll~~~~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~-~~~~~~~~~~~t~L~~A~-----~~~~~~~~~ 207 (739)
.+.++.+++.+.+ ++..|..|.||||+|+..|+.+++++|++.|+ +++..+ ..|+||||+|+ ..++.++++
T Consensus 89 ~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~-~~g~tpL~~a~~~~~~~~~~~~~v~ 167 (276)
T 4hbd_A 89 LVTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQN-RAGYSPIMLTALATLKTQDDIETVL 167 (276)
T ss_dssp HHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCC-TTSCCHHHHGGGCCCCSHHHHHHHH
T ss_pred HHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCC-CCCCCHHHHHHHHHhhhhhhHHHHH
Confidence 3444444444333 66778888888888888888888888888887 555444 44578888888 567888888
Q ss_pred HHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHH-cCCCCcccC
Q psy903 208 LLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLE-YGAGINTHS 286 (739)
Q Consensus 208 ~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~-~~~~~~~~~ 286 (739)
+|++.|.+++..+..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|++ .|++++..
T Consensus 168 ~Ll~~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~- 246 (276)
T 4hbd_A 168 QLFRLGNINAKASQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLT- 246 (276)
T ss_dssp HHHHHSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCC-
T ss_pred HHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCc-
Confidence 8888888888888888888888888888888888888888888888888888888888888888888888 78887764
Q ss_pred cCccCCHHHHHHHcCCHHHHHHHHHcC
Q psy903 287 NEFKESALTLACYKGHLDMVRFLLSAG 313 (739)
Q Consensus 287 ~~~~~~~l~~A~~~~~~~~v~~Ll~~~ 313 (739)
+..|.|||++|+..|+.+++++|++++
T Consensus 247 d~~g~TpL~~A~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 247 DRDGSTALMVALDAGQSEIASMLYSRM 273 (276)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHHHHHHC
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 455888888888888888888888764
No 59
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.96 E-value=3e-28 Score=214.20 Aligned_cols=160 Identities=27% Similarity=0.390 Sum_probs=144.0
Q ss_pred CCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcC
Q psy903 122 QNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSG 201 (739)
Q Consensus 122 ~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~ 201 (739)
.+.|+|+.|+..|+.+++++|++.|.+++..+..|.||||+|+..|+.+++++|++.|++++..+.. |.||||+|+..|
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~-g~t~L~~A~~~~ 80 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKG-RESALSLACSKG 80 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT-CCCHHHHHHHHT
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCC-CCcHHHHHHHcC
Confidence 3578899999999999999999999999999999999999999999999999999999888777644 469999999999
Q ss_pred cHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCCC
Q psy903 202 FIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAG 281 (739)
Q Consensus 202 ~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~~ 281 (739)
+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++..+..|.|||++|+..|+.+++++|++++.+
T Consensus 81 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~ 160 (167)
T 3v31_A 81 YTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQVIESHLLK 160 (167)
T ss_dssp CHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999987654
Q ss_pred C
Q psy903 282 I 282 (739)
Q Consensus 282 ~ 282 (739)
.
T Consensus 161 ~ 161 (167)
T 3v31_A 161 L 161 (167)
T ss_dssp H
T ss_pred H
Confidence 4
No 60
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.96 E-value=3.9e-28 Score=212.51 Aligned_cols=158 Identities=29% Similarity=0.386 Sum_probs=126.7
Q ss_pred CCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcC
Q psy903 122 QNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSG 201 (739)
Q Consensus 122 ~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~ 201 (739)
...++|+.|+..|+.+++++|++.|++++..+..|.||||+|+. |+.+++++|++.|++++..+.. |.||||+|+..|
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~-g~t~L~~A~~~~ 81 (162)
T 1ihb_A 4 PWGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRT-GFAVIHDAARAG 81 (162)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTT-SCCHHHHHHHHT
T ss_pred hHhhHHHHHHHcCCHHHHHHHHhCCCCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCC-CCCHHHHHHHcC
Confidence 34678888888888888888888888888888888888888887 8888888888888877766544 458888888888
Q ss_pred cHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCC-CCCCCCCCCcHHHHHHhcCChHHHHHHHHcCC
Q psy903 202 FIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGAN-VEDHNENGHTPLMEAASAGHVGVAKILLEYGA 280 (739)
Q Consensus 202 ~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~-~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~ 280 (739)
+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++ ++..+..|.|||++|+..|+.+++++|+++|+
T Consensus 82 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~GA 161 (162)
T 1ihb_A 82 FLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGA 161 (162)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC-
T ss_pred CHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCC
Confidence 88888888888888888888888888888888888888888888877 47778888888888888888888888888775
Q ss_pred C
Q psy903 281 G 281 (739)
Q Consensus 281 ~ 281 (739)
+
T Consensus 162 d 162 (162)
T 1ihb_A 162 G 162 (162)
T ss_dssp -
T ss_pred C
Confidence 3
No 61
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.96 E-value=1.7e-31 Score=246.34 Aligned_cols=207 Identities=17% Similarity=0.121 Sum_probs=171.8
Q ss_pred HHHHHHcCCCCccc---CCCCCcHHHHHHhcCcHHHHHHHHHccccccccCCCCCcchhHHHhhccccccccCCCCCCCH
Q psy903 14 VKKLLTEGRSVHET---TDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKLATGDGKLADP 90 (739)
Q Consensus 14 v~~ll~~g~~~~~~---~~~g~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~~ 90 (739)
|+.|+++|++++.. +..|.||||+|+..|+.++|++|+++|++++..+..|. ||||+|+..
T Consensus 1 v~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~-tpLh~A~~~--------------- 64 (229)
T 2vge_A 1 MRSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGI-TALHNAICG--------------- 64 (229)
T ss_dssp ---------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSC-CHHHHHHHT---------------
T ss_pred CeehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCC-CHHHHHHHc---------------
Confidence 57889999887654 45677889999999999999999999999998877665 777666654
Q ss_pred HHHHhhhhhhhchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCcHH
Q psy903 91 EVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYE 170 (739)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~ 170 (739)
|+.+++++|++.|++++..|..|.||||+|+..|+.+
T Consensus 65 -------------------------------------------g~~~~v~~Ll~~ga~~n~~d~~g~tpLh~A~~~g~~~ 101 (229)
T 2vge_A 65 -------------------------------------------ANYSIVDFLITAGANVNSPDSHGWTPLHCAASCNDTV 101 (229)
T ss_dssp -------------------------------------------TCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHH
T ss_pred -------------------------------------------CCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHH
Confidence 4789999999999999999999999999999999999
Q ss_pred HHHHHHhCCCCccccCCCCCCcHHHHH--HHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCC
Q psy903 171 LAQVLLAMHANVEDRGIKGECTPLMEA--ASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGAN 248 (739)
Q Consensus 171 ~v~~Ll~~~~~~~~~~~~~~~t~L~~A--~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~ 248 (739)
++++|++.|++++..+...|+||||+| +..|+.+++++|+++|++++.++..|.||++.++..+. .++|++.|++
T Consensus 102 ~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~l~~~~~~~~---~~~ll~~ga~ 178 (229)
T 2vge_A 102 ICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYALWDYSAEFG---DELSFREGES 178 (229)
T ss_dssp HHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSGGGEEEESSCBCCSST---TBCCBCTTCE
T ss_pred HHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcccccCCchHHHHHHhhccc---cccCcccccc
Confidence 999999999999988776788999999 99999999999999999999999999999996655443 3677888988
Q ss_pred --CCCCCCCCCcHHHHHHhcCChHHHHHHH-HcCCCC
Q psy903 249 --VEDHNENGHTPLMEAASAGHVGVAKILL-EYGAGI 282 (739)
Q Consensus 249 --~~~~~~~~~t~L~~A~~~~~~~ii~~Ll-~~~~~~ 282 (739)
++.+|..|.||||+|+..|+.++++.++ +..+.+
T Consensus 179 ~~~~~~d~~G~TpL~~A~~~g~~~~v~~~~l~~~p~~ 215 (229)
T 2vge_A 179 VTVLRRDGPEETDWWWAALHGQEGYVPRNYFGLFPRV 215 (229)
T ss_dssp EEEEESSCTTCSSEEEEEETTEEEEEEGGGEESSCCC
T ss_pred ccccccCCCcccHHHHHHHcCCcceeehhhhhhCCCC
Confidence 6788999999999999999999987644 444443
No 62
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.96 E-value=7e-28 Score=217.26 Aligned_cols=162 Identities=30% Similarity=0.406 Sum_probs=120.7
Q ss_pred CCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHH
Q psy903 117 ENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLME 196 (739)
Q Consensus 117 ~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~ 196 (739)
...+..+.|+|+.|+..|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|++.|++++..+.. |.||||+
T Consensus 29 n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~-g~t~L~~ 107 (192)
T 2rfm_A 29 NYRDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFS-GKTPLMW 107 (192)
T ss_dssp TCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTT-SCCHHHH
T ss_pred hCcCCCCCCHHHHHHHcCCHHHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCC-CCcHHHH
Confidence 345566777777777777777777777777777777777777777777777777777777777776665543 4577777
Q ss_pred HHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHH
Q psy903 197 AASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILL 276 (739)
Q Consensus 197 A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll 276 (739)
|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++.+|..|.|||++|+..|+.+++++|+
T Consensus 108 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll 187 (192)
T 2rfm_A 108 SIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQEVIKIFT 187 (192)
T ss_dssp HHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCcHHHHHHHH
Confidence 77777777777777777777777777777777777777777777777777777777777777777777777777777777
Q ss_pred HcC
Q psy903 277 EYG 279 (739)
Q Consensus 277 ~~~ 279 (739)
+++
T Consensus 188 ~~~ 190 (192)
T 2rfm_A 188 EVR 190 (192)
T ss_dssp HHH
T ss_pred hcc
Confidence 653
No 63
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.95 E-value=4.9e-28 Score=214.02 Aligned_cols=160 Identities=27% Similarity=0.381 Sum_probs=116.0
Q ss_pred chHHHHHHHcCCHHHHHHHHhcCCC-CCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCc
Q psy903 124 ERSLVQACSDGDVKTVKKLLTEGRS-VHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGF 202 (739)
Q Consensus 124 ~~~l~~A~~~~~~~~~~~ll~~~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~ 202 (739)
.++|+.|+..|+.+++++|++.+.+ ++..+..|.||||+|+..|+.+++++|++.|++++..+.. |.||||+|+..|+
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~-g~t~L~~A~~~~~ 81 (172)
T 3v30_A 3 SLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKE-RESALSLASTGGY 81 (172)
T ss_dssp -CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTT-CCCHHHHHHHTTC
T ss_pred hhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhccc-CCCHHHHHHHCCC
Confidence 4567777777777777777777665 6666777777777777777777777777777776665544 3577777777777
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCCCC
Q psy903 203 IEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGI 282 (739)
Q Consensus 203 ~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~~~ 282 (739)
.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++.++..|.|||++|+..|+.+++++|++++++.
T Consensus 82 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~ 161 (172)
T 3v30_A 82 TDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIENHILKL 161 (172)
T ss_dssp HHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 77777777777777777777777777777777777777777777777777777777777777777777777777766554
Q ss_pred cc
Q psy903 283 NT 284 (739)
Q Consensus 283 ~~ 284 (739)
..
T Consensus 162 ~~ 163 (172)
T 3v30_A 162 FQ 163 (172)
T ss_dssp SC
T ss_pred hc
Confidence 43
No 64
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.95 E-value=1.1e-31 Score=264.19 Aligned_cols=257 Identities=16% Similarity=0.112 Sum_probs=159.9
Q ss_pred hHHHHHHHcCCHHHHHHHHhcCCCC---CcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCcc--ccCCCCCCcHHHHHHH
Q psy903 125 RSLVQACSDGDVKTVKKLLTEGRSV---HETTDEGESLLSLACSAGYYELAQVLLAMHANVE--DRGIKGECTPLMEAAS 199 (739)
Q Consensus 125 ~~l~~A~~~~~~~~~~~ll~~~~~~---~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~--~~~~~~~~t~L~~A~~ 199 (739)
|+||.|+..|+.+++++|++.|... +..+..|.||||+|+..|+.++|++|+++|+++. ...... +||||+|+.
T Consensus 94 T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~ 172 (376)
T 2aja_A 94 VICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAE 172 (376)
T ss_dssp HHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHHHH
Confidence 5566666667888888888887722 2334567789999999999999999999986521 111111 589999999
Q ss_pred cCcHHHHHHHHHCCCCCCC--CCCCCCcHHHHHH-hcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHH
Q psy903 200 SGFIEIVRLLINHGADVNG--QSSSGNTPLMYAC-AGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILL 276 (739)
Q Consensus 200 ~~~~~~~~~Ll~~g~~~~~--~~~~~~t~L~~A~-~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll 276 (739)
.|+.+++++|+++|++++. .|..|.||||+|+ ..|+.+++++|++.|+ .|.|||++|+..|+.+++++|+
T Consensus 173 ~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga-------~~~taL~~Aa~~g~~evv~lL~ 245 (376)
T 2aja_A 173 NGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPV-------MLAYAEIHEFEYGEKYVNPFIA 245 (376)
T ss_dssp TTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHH-------HHHHHHHCTTTTTTTTHHHHHH
T ss_pred CCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCC-------ccchHHHHHHHCCCHHHHHHHH
Confidence 9999999999999888776 7778889999999 9999999999988764 2678999999999999999999
Q ss_pred HcCCCCcccCcCccCCHHHHHHHcCCHHH------------HHHHHHcCCCCCCCCCcCCcHHHHHHhCCchHHHHHHHH
Q psy903 277 EYGAGINTHSNEFKESALTLACYKGHLDM------------VRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLD 344 (739)
Q Consensus 277 ~~~~~~~~~~~~~~~~~l~~A~~~~~~~~------------v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~L~~ 344 (739)
++|++++. ..++++.|+..|+.++ ++.|+.++ ..+..+.+++|++
T Consensus 246 ~~ga~~~~-----~~~~l~~A~~~g~~~vv~~~~~~~~~~~~~~li~~~------------------~~~~~~~~~~Ll~ 302 (376)
T 2aja_A 246 RHVNRLKE-----MHDAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRN------------------DEVLLDDIRFLLS 302 (376)
T ss_dssp HHHHHHHH-----HHTTTTTTSSSSCCCCSSHHHHHHHHHHHHHHHHHC------------------CGGGHHHHHHHHT
T ss_pred hcCccccc-----ccHHHHHHHHCCChhhhcHHhhhhhHHHHHHHHHcc------------------hhhHHHHHHHHHh
Confidence 88776543 2245666666666553 33444433 1123556677765
Q ss_pred cCCCchhhhcccCCCCCCCCCCCCCcccccchHHHHHHhcCCHHHHHHHHHCCCCCccCCCCCCCHHHHHHHcCcHHHHH
Q psy903 345 SGAQSVSAYARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQ 424 (739)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~ 424 (739)
.+..... ...... .....++++.|+..|+.+++++|++.| ...+..+.|++..|-..|..++++
T Consensus 303 ~~~vk~l--~~~g~~-----------~n~~~~~L~~A~~~g~~e~v~lLl~~~---~v~~~~~~~~~~~~~~~~~~~~~~ 366 (376)
T 2aja_A 303 IPGIKAL--APTATI-----------PGDANELLRLALRLGNQGACALLLSIP---SVLALTKANNYYINETGGRLDLRA 366 (376)
T ss_dssp STTTGGG--SSCCSS-----------TTCCCHHHHHHHHHTCTTHHHHHTTSH---HHHHSCC-----------------
T ss_pred Chhhhhh--hccCCC-----------CCCccHHHHHHHHcCcHHHHHHHHcCh---HHHHHHHHhccccccccccccHHH
Confidence 4321110 000000 012235688888888888888888764 446677889999999999988877
Q ss_pred HHHH
Q psy903 425 VLLA 428 (739)
Q Consensus 425 ~Ll~ 428 (739)
.-+.
T Consensus 367 ~~~~ 370 (376)
T 2aja_A 367 VALE 370 (376)
T ss_dssp ----
T ss_pred HHHH
Confidence 6554
No 65
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.95 E-value=7.9e-28 Score=212.69 Aligned_cols=170 Identities=24% Similarity=0.255 Sum_probs=145.9
Q ss_pred CCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCc
Q psy903 156 GESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGH 235 (739)
Q Consensus 156 g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~ 235 (739)
+.||||.|+..|+.+++++|++.+.......+..|+||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 81 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGY 81 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCCC
Confidence 35799999999999999999999987544545667799999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCCCCcccCcCccCCHHHHHHHcCCHHHHHHHHHcCCC
Q psy903 236 EAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGAD 315 (739)
Q Consensus 236 ~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~ 315 (739)
.+++++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++.. +..|.|||++|+..++.+++++|++++++
T Consensus 82 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~-~~~g~t~l~~A~~~~~~~~~~~L~~~~~~ 160 (172)
T 3v30_A 82 TDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTE-ADSGYTPMDLAVALGYRKVQQVIENHILK 160 (172)
T ss_dssp HHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCC-CTTSCCHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccc-CCCCCCHHHHHHHhCcHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999988774 45589999999999999999999999888
Q ss_pred CCCCCCcCCcH
Q psy903 316 QEHKTDEMHTA 326 (739)
Q Consensus 316 ~~~~~~~~~~~ 326 (739)
+...+..+.+|
T Consensus 161 ~~~~~~~~~~p 171 (172)
T 3v30_A 161 LFQSNLVPADP 171 (172)
T ss_dssp HSCC-------
T ss_pred HhcccCCCCCC
Confidence 77776666554
No 66
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.95 E-value=1.4e-27 Score=208.91 Aligned_cols=159 Identities=28% Similarity=0.297 Sum_probs=125.7
Q ss_pred CCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcC
Q psy903 155 EGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGG 234 (739)
Q Consensus 155 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~ 234 (739)
...||||.|+..|+.+++++|++.|++++..+.. |.||||+|+. |+.+++++|+++|++++.++..|.||||+|+..|
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~-g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 81 (162)
T 1ihb_A 4 PWGNELASAAARGDLEQLTSLLQNNVNVNAQNGF-GRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAG 81 (162)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTTSCCCTTCCCTT-SCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred hHhhHHHHHHHcCCHHHHHHHHhCCCCccccCcc-CccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC
Confidence 3457888888888888888888888877666544 4688888888 8888888888888888888888888888888888
Q ss_pred cHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCCCCcccCcCccCCHHHHHHHcCCHHHHHHHHHcCC
Q psy903 235 HEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGA 314 (739)
Q Consensus 235 ~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~ 314 (739)
+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++.....+..|.|||++|+..++.+++++|+++|+
T Consensus 82 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~GA 161 (162)
T 1ihb_A 82 FLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGA 161 (162)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC-
T ss_pred CHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCC
Confidence 88888888888888888888888888888888888888888888877544455567788888888888888888888776
Q ss_pred C
Q psy903 315 D 315 (739)
Q Consensus 315 ~ 315 (739)
+
T Consensus 162 d 162 (162)
T 1ihb_A 162 G 162 (162)
T ss_dssp -
T ss_pred C
Confidence 4
No 67
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.95 E-value=3.4e-27 Score=203.70 Aligned_cols=150 Identities=32% Similarity=0.441 Sum_probs=127.3
Q ss_pred chHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcH
Q psy903 124 ERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFI 203 (739)
Q Consensus 124 ~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~ 203 (739)
.++|+.|+..|+.+++++|++.|.+++ .+..|.||||+|+..|+.+++++|++.|++++..+.. |.||||+|+..|+.
T Consensus 3 ~~~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~-g~t~L~~A~~~~~~ 80 (153)
T 1awc_B 3 GKKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKV-DRTPLHMAASEGHA 80 (153)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHTCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTT-CCCHHHHHHHHTCH
T ss_pred cHHHHHHHHcCCHHHHHHHHHcCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCC-CCCHHHHHHHcChH
Confidence 467888888888888888888888776 4777888888888888888888888888887766544 46888888888888
Q ss_pred HHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHH
Q psy903 204 EIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKIL 275 (739)
Q Consensus 204 ~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~L 275 (739)
+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++.++..|.|||++|+..|+.+++++|
T Consensus 81 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 81 NIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp HHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 888888888888888888888888888888888888888888888888888888888888888888888876
No 68
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.95 E-value=4.5e-31 Score=259.68 Aligned_cols=204 Identities=12% Similarity=0.104 Sum_probs=107.3
Q ss_pred chHHHHHHHcCCHHHHHHHHhcCCCC---CcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccc--cCCCCCCcHHHHHH
Q psy903 124 ERSLVQACSDGDVKTVKKLLTEGRSV---HETTDEGESLLSLACSAGYYELAQVLLAMHANVED--RGIKGECTPLMEAA 198 (739)
Q Consensus 124 ~~~l~~A~~~~~~~~~~~ll~~~~~~---~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~--~~~~~~~t~L~~A~ 198 (739)
.+||+.|+..|+.+++++|++.|+++ +..+.+ .||||+|+..|+.++|++|+++|++++. .+. .|.||||+|+
T Consensus 129 ~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~-~g~TpL~~Aa 206 (376)
T 2aja_A 129 YQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCELAPTEATAMIQA-ENYYAFRWAA 206 (376)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHH-HHHHHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCccchhccCC-CCCCHHHHHH
Confidence 34566666666777777777777542 222222 6777777777777777777777766544 322 2357777777
Q ss_pred -HcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCC---------
Q psy903 199 -SSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGH--------- 268 (739)
Q Consensus 199 -~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~--------- 268 (739)
..|+.+++++|+++|+ .|.|||++|+..|+.+++++|+++|++++..+. +++.|+..|+
T Consensus 207 ~~~G~~eiv~~Ll~~ga-------~~~taL~~Aa~~g~~evv~lL~~~ga~~~~~~~----~l~~A~~~g~~~vv~~~~~ 275 (376)
T 2aja_A 207 VGRGHHNVINFLLDCPV-------MLAYAEIHEFEYGEKYVNPFIARHVNRLKEMHD----AFKLSNPDGVFDLVTKSEC 275 (376)
T ss_dssp STTCCHHHHHHHTTSHH-------HHHHHHHCTTTTTTTTHHHHHHHHHHHHHHHHT----TTTTTSSSSCCCCSSHHHH
T ss_pred HHCCCHHHHHHHHhCCC-------ccchHHHHHHHCCCHHHHHHHHhcCcccccccH----HHHHHHHCCChhhhcHHhh
Confidence 7777777777776553 256777777777777777777776655433221 2333333333
Q ss_pred ------------------hHHHHHHHHcCCCC----cccCcCccCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCcCCcH
Q psy903 269 ------------------VGVAKILLEYGAGI----NTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTA 326 (739)
Q Consensus 269 ------------------~~ii~~Ll~~~~~~----~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~ 326 (739)
.+.+++|++.+... .......+.++|++|+..|+.+++++|++.| ...+..+.++
T Consensus 276 ~~~~~~~~~li~~~~~~~~~~~~~Ll~~~~vk~l~~~g~~~n~~~~~L~~A~~~g~~e~v~lLl~~~---~v~~~~~~~~ 352 (376)
T 2aja_A 276 LQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACALLLSIP---SVLALTKANN 352 (376)
T ss_dssp HHHHHHHHHHHHHCCGGGHHHHHHHHTSTTTGGGSSCCSSTTCCCHHHHHHHHHTCTTHHHHHTTSH---HHHHSCC---
T ss_pred hhhHHHHHHHHHcchhhHHHHHHHHHhChhhhhhhccCCCCCCccHHHHHHHHcCcHHHHHHHHcCh---HHHHHHHHhc
Confidence 34455555422100 0011122456788888888888888887653 4445556677
Q ss_pred HHHHHhCCchHHHHHHH
Q psy903 327 LMEASMDGHVEVAKLLL 343 (739)
Q Consensus 327 l~~a~~~~~~~~~~~L~ 343 (739)
+++|-..|..++.+.-.
T Consensus 353 ~~~~~~~~~~~~~~~~~ 369 (376)
T 2aja_A 353 YYINETGGRLDLRAVAL 369 (376)
T ss_dssp -----------------
T ss_pred cccccccccccHHHHHH
Confidence 77777777777665543
No 69
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.95 E-value=4.6e-27 Score=206.68 Aligned_cols=153 Identities=38% Similarity=0.535 Sum_probs=82.0
Q ss_pred cHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHH
Q psy903 192 TPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGV 271 (739)
Q Consensus 192 t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~i 271 (739)
++|+.|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.++
T Consensus 16 ~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~ 95 (169)
T 2y1l_E 16 KKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFGHLEI 95 (169)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred chHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHH
Confidence 55555555555555555555555555555555555555555555555555555555555555555555555555555555
Q ss_pred HHHHHHcCCCCcccCcCccCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCcCCcHHHHHHhCCchHHHHHHHHc
Q psy903 272 AKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDS 345 (739)
Q Consensus 272 i~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~L~~~ 345 (739)
+++|+++|++++.. +..|.||||+|+..++.+++++|+++|++++..+..|.||+++|+..++.+++++|++.
T Consensus 96 ~~~Ll~~g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~ 168 (169)
T 2y1l_E 96 VEVLLKNGADVNAN-DMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQKL 168 (169)
T ss_dssp HHHHHHTTCCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC
T ss_pred HHHHHHcCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHc
Confidence 55555555554432 22355555555555555555555555555555555555555555555555555555543
No 70
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.95 E-value=4.3e-27 Score=209.21 Aligned_cols=164 Identities=28% Similarity=0.404 Sum_probs=134.0
Q ss_pred CCCchHHHHHHHcCCHHHHHHHHhc-CCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHH
Q psy903 121 PQNERSLVQACSDGDVKTVKKLLTE-GRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAAS 199 (739)
Q Consensus 121 ~~~~~~l~~A~~~~~~~~~~~ll~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~ 199 (739)
+...++|+.|+..|+.+++++|++. +.+++..+..|.||||+|+..|+.+++++|++.|++++..+.. |.||||+|+.
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~-g~t~L~~A~~ 81 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRG-DDTPLHLAAS 81 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT-CCCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCC-CCCHHHHHHH
Confidence 3456778888888888888888887 5678888888888888888888888888888888888776544 4588888888
Q ss_pred cCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcC
Q psy903 200 SGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYG 279 (739)
Q Consensus 200 ~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~ 279 (739)
.|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++..|..|.|||++|+..++.+++++|+++|
T Consensus 82 ~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~L~~~g 161 (179)
T 3f6q_A 82 HGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLRERAEKMG 161 (179)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGGGSCHHHHHHHHHHHHHTT
T ss_pred cCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCCcHHHHHHHHHHHHHHHHHHhh
Confidence 88888888888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred CCCccc
Q psy903 280 AGINTH 285 (739)
Q Consensus 280 ~~~~~~ 285 (739)
.+++..
T Consensus 162 ~~~~~~ 167 (179)
T 3f6q_A 162 QNLNRI 167 (179)
T ss_dssp CCCSCB
T ss_pred cCcccC
Confidence 877654
No 71
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.95 E-value=1.1e-26 Score=204.29 Aligned_cols=155 Identities=27% Similarity=0.390 Sum_probs=78.1
Q ss_pred CCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCc
Q psy903 156 GESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGH 235 (739)
Q Consensus 156 g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~ 235 (739)
|.||||.|+..|+.+++++|++.+.+++..+.. |.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+
T Consensus 3 ~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~-g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 81 (167)
T 3v31_A 3 NSLSVHQLAAQGEMLYLATRIEQENVINHTDEE-GFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGY 81 (167)
T ss_dssp TCCCHHHHHHTTCHHHHHHHHHHSSCTTCCCTT-SCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred CcchHHHHHHCCCHHHHHHHHHcCCCcCCCCCC-CCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCC
Confidence 445555555555555555555555444433332 2355555555555555555555555555555555555555555555
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCCCCcccCcCccCCHHHHHHHcCCHHHHHHHHHc
Q psy903 236 EAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSA 312 (739)
Q Consensus 236 ~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~ 312 (739)
.+++++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++.. +..|.||+++|+..|+.+++++|+++
T Consensus 82 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~~g~t~l~~A~~~~~~~~~~~L~~~ 157 (167)
T 3v31_A 82 TDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIE-TDSGYNSMDLAVALGYRSVQQVIESH 157 (167)
T ss_dssp HHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCC-CTTSCCHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCc-CCCCCCHHHHHHHcCcHHHHHHHHHH
Confidence 55555555555555555555555555555555555555555555444432 22344555555555555555555444
No 72
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.95 E-value=1.5e-26 Score=199.67 Aligned_cols=150 Identities=28% Similarity=0.393 Sum_probs=118.4
Q ss_pred CcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcH
Q psy903 157 ESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHE 236 (739)
Q Consensus 157 ~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~ 236 (739)
.++|+.|+..|+.+++++|++.|++++ .+..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.
T Consensus 3 ~~~L~~A~~~g~~~~v~~Ll~~g~~~~--~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 80 (153)
T 1awc_B 3 GKKLLEAARAGQDDEVRILMANGAPFT--TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHA 80 (153)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHTCCCC--CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCH
T ss_pred cHHHHHHHHcCCHHHHHHHHHcCCCCC--cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcChH
Confidence 467888888888888888888887664 234456888888888888888888888888888888888888888888888
Q ss_pred HHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCCCCcccCcCccCCHHHHHHHcCCHHHHHHH
Q psy903 237 AVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFL 309 (739)
Q Consensus 237 ~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~L 309 (739)
+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++.. +..|.||+++|+..|+.+++++|
T Consensus 81 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~-~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 81 NIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQ-SKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp HHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCC-CTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccc-CCCCCCHHHHHHHcCCHHHHHHh
Confidence 8888888888888888888888888888888888888888887777654 34577888888888888777776
No 73
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.95 E-value=5.5e-27 Score=205.64 Aligned_cols=159 Identities=31% Similarity=0.424 Sum_probs=126.2
Q ss_pred CCCCchHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHH
Q psy903 120 RPQNERSLVQACSDGDVKTVKKLLT-EGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAA 198 (739)
Q Consensus 120 ~~~~~~~l~~A~~~~~~~~~~~ll~-~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~ 198 (739)
...+.++|+.|+..|+.+++++|++ .+.+++..+..|.||||+|+..|+.+++++|++.|++++..+.. |.||||+|+
T Consensus 5 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~-g~t~L~~A~ 83 (165)
T 3twr_A 5 NSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKG-GLVPLHNAC 83 (165)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT-SCCHHHHHH
T ss_pred cchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCC-CCCHHHHHH
Confidence 3455778888888888888888887 45567777777888888888888888888888888887766654 458888888
Q ss_pred HcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHc
Q psy903 199 SSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEY 278 (739)
Q Consensus 199 ~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~ 278 (739)
..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.|||++|+. ++.+++++|+++
T Consensus 84 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~-~~~~i~~~L~~~ 162 (165)
T 3twr_A 84 SYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKD-GDTDIQDLLRGD 162 (165)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTGGGSCT-TCHHHHHHHHTC
T ss_pred HcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCChhHhHhc-CChHHHHHHhhc
Confidence 8888888888888888888888888888888888888888888888888888888888888888665 778888888877
Q ss_pred CC
Q psy903 279 GA 280 (739)
Q Consensus 279 ~~ 280 (739)
|+
T Consensus 163 gA 164 (165)
T 3twr_A 163 AA 164 (165)
T ss_dssp --
T ss_pred cc
Confidence 64
No 74
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.94 E-value=2.2e-26 Score=199.78 Aligned_cols=153 Identities=29% Similarity=0.415 Sum_probs=137.8
Q ss_pred CchHHHHHHHcCCHHHHHHHHhc-CCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcC
Q psy903 123 NERSLVQACSDGDVKTVKKLLTE-GRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSG 201 (739)
Q Consensus 123 ~~~~l~~A~~~~~~~~~~~ll~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~ 201 (739)
+.++|+.|+..|+.+++++|++. +.+++..+..|.||||+ +..|+.+++++|++.|++++..+.. |.||||+|+..|
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~-g~t~L~~A~~~~ 79 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTS-GTSPVHDAARTG 79 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTT-SCCHHHHHHHTT
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCC-CCCHHHHHHHcC
Confidence 45789999999999999999988 44888899999999999 8899999999999999998877654 569999999999
Q ss_pred cHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHc
Q psy903 202 FIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEY 278 (739)
Q Consensus 202 ~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~ 278 (739)
+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++ ++++..|..|.|||++|+..|+.+++++|+++
T Consensus 80 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 80 FLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp CHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred cHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999998 89999999999999999999999999999874
No 75
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.94 E-value=1.2e-26 Score=206.23 Aligned_cols=167 Identities=25% Similarity=0.270 Sum_probs=131.7
Q ss_pred CCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcC
Q psy903 155 EGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGG 234 (739)
Q Consensus 155 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~ 234 (739)
++.++|+.|+..|+.+++++|++.+.......+..|+||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|
T Consensus 4 ~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 83 (179)
T 3f6q_A 4 EFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHG 83 (179)
T ss_dssp ---CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcC
Confidence 45678888888888888888888754433333445568888888888888888888888888888888888888888888
Q ss_pred cHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCCCCcccCcCccCCHHHHHHHcCCHHHHHHHHHcCC
Q psy903 235 HEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGA 314 (739)
Q Consensus 235 ~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~ 314 (739)
+.+++++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++.. +..|.||+++|+..++.+++++|++.|+
T Consensus 84 ~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~-~~~g~tpl~~A~~~~~~~~~~~L~~~g~ 162 (179)
T 3f6q_A 84 HRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSIC-NKYGEMPVDKAKAPLRELLRERAEKMGQ 162 (179)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBC-CTTSCCGGGGSCHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchh-ccCCCCcHHHHHHHHHHHHHHHHHHhhc
Confidence 888888888888888888888888888888888888888888888887764 4458888888888888888888888888
Q ss_pred CCCCCCCc
Q psy903 315 DQEHKTDE 322 (739)
Q Consensus 315 ~~~~~~~~ 322 (739)
+++..+..
T Consensus 163 ~~~~~~~~ 170 (179)
T 3f6q_A 163 NLNRIPYK 170 (179)
T ss_dssp CCSCBCCC
T ss_pred CcccCCcc
Confidence 87765544
No 76
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.94 E-value=1.1e-26 Score=203.77 Aligned_cols=161 Identities=31% Similarity=0.375 Sum_probs=128.9
Q ss_pred CCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHH
Q psy903 152 TTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYAC 231 (739)
Q Consensus 152 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~ 231 (739)
.+..|.|+|+.|+..|+.+++++|++.+..........|+||||+|+..|+.+++++|+++|++++.++..|.||||+|+
T Consensus 4 ~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 83 (165)
T 3twr_A 4 GNSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNAC 83 (165)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred CcchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHH
Confidence 35667788999999999999988888654333333444568888888888888888888888888888888888888888
Q ss_pred hcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCCCCcccCcCccCCHHHHHHHcCCHHHHHHHHH
Q psy903 232 AGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLS 311 (739)
Q Consensus 232 ~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~ 311 (739)
..|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++.. +..|.||+++|+. ++.+++++|++
T Consensus 84 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~-~~~g~t~l~~a~~-~~~~i~~~L~~ 161 (165)
T 3twr_A 84 SYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKK-NRDGNTPLDLVKD-GDTDIQDLLRG 161 (165)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCC-CTTSCCTGGGSCT-TCHHHHHHHHT
T ss_pred HcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccc-CCCCCChhHhHhc-CChHHHHHHhh
Confidence 888888888888888888888888888888888888888888888888887764 4458888888766 78888888887
Q ss_pred cCC
Q psy903 312 AGA 314 (739)
Q Consensus 312 ~~~ 314 (739)
+|+
T Consensus 162 ~gA 164 (165)
T 3twr_A 162 DAA 164 (165)
T ss_dssp C--
T ss_pred ccc
Confidence 764
No 77
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.94 E-value=1e-29 Score=234.36 Aligned_cols=156 Identities=23% Similarity=0.261 Sum_probs=90.3
Q ss_pred HHHHhCCCCccccC--CCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCC
Q psy903 173 QVLLAMHANVEDRG--IKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVE 250 (739)
Q Consensus 173 ~~Ll~~~~~~~~~~--~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~ 250 (739)
+.|++.|++++..+ ...+.||||.|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++
T Consensus 2 ~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n 81 (229)
T 2vge_A 2 RSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANVN 81 (229)
T ss_dssp --------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred eehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC
Confidence 34455554443322 2223455666666666666666666666666666666666666666666666666666666666
Q ss_pred CCCCCCCcHHHHHHhcCChHHHHHHHHcCCCCcccCcCccCCHHHHH--HHcCCHHHHHHHHHcCCCCCCCCCcCCcHHH
Q psy903 251 DHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLA--CYKGHLDMVRFLLSAGADQEHKTDEMHTALM 328 (739)
Q Consensus 251 ~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~~~~~~~~~~~~~~l~~A--~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~ 328 (739)
..|..|.||||+|+..|+.+++++|+++|++++...+..|.|||++| +..++.+++++|++.|++++..+..+.++++
T Consensus 82 ~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~l~ 161 (229)
T 2vge_A 82 SPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYALW 161 (229)
T ss_dssp CCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSGGGEEEESS
T ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcccccCCchHHHH
Confidence 66666666666666666666666666666666555444566666666 6666666666666666666666655555554
No 78
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.94 E-value=9.1e-26 Score=195.84 Aligned_cols=153 Identities=24% Similarity=0.274 Sum_probs=117.7
Q ss_pred CCcHHHHHHhcCcHHHHHHHHHc-cccccccCCCCCcchhHHHhhccccccccCCCCCCCHHHHHhhhhhhhchHHHHHH
Q psy903 31 GESLLSLACSAGYYELAQVLLAM-HANVEDRGIKGECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVSCALDEAAA 109 (739)
Q Consensus 31 g~t~L~~A~~~~~~~iv~~Ll~~-ga~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (739)
|.||||.|+..|+.+++++|++. +.+++..+..+. ||||+ +..
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~-t~L~~-~~~---------------------------------- 45 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGK-TALQV-MMF---------------------------------- 45 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSC-CHHHH-SCT----------------------------------
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCC-cHHHH-HHc----------------------------------
Confidence 45778888888888888888877 336666665554 66666 443
Q ss_pred HHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCC
Q psy903 110 ALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKG 189 (739)
Q Consensus 110 ~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~ 189 (739)
|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|++.|++++..+..
T Consensus 46 ------------------------~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~- 100 (156)
T 1bd8_A 46 ------------------------GSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGT- 100 (156)
T ss_dssp ------------------------TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTT-
T ss_pred ------------------------CCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCC-
Confidence 3577777888888888888888888888888888888888888888877766654
Q ss_pred CCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHC
Q psy903 190 ECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLEC 245 (739)
Q Consensus 190 ~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~ 245 (739)
|.||||+|+..|+.+++++|+++ ++++.+|..|.||||+|+..|+.+++++|+++
T Consensus 101 g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 101 GALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred CCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence 45888888888888888888888 88888888888888888888888888888764
No 79
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.93 E-value=6.5e-27 Score=218.47 Aligned_cols=163 Identities=23% Similarity=0.273 Sum_probs=87.8
Q ss_pred CCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcC
Q psy903 155 EGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGG 234 (739)
Q Consensus 155 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~ 234 (739)
.|.||||.|+..++.++++.|+++|++++.. ..+.||||.|+..|+.+++++|++.|++++.+|..|.||||+|+..|
T Consensus 4 ~g~t~L~~a~~~~~~~~~~~ll~~g~~~~~~--~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g 81 (239)
T 1ycs_B 4 TGQVSLPPGKRTNLRKTGSERIAHGMRVKFN--PLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAG 81 (239)
T ss_dssp -----------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHT
T ss_pred cccccCchhhhhhhHHHHHHHhccCCCcccC--chhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcC
Confidence 4566666666666666666666666666543 23356777777777777777777666666666666777777777777
Q ss_pred cHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCCCCcccCcCccCCHHHHH--HHcCCHHHHHHHHHc
Q psy903 235 HEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLA--CYKGHLDMVRFLLSA 312 (739)
Q Consensus 235 ~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~~~~~~~~~~~~~~l~~A--~~~~~~~~v~~Ll~~ 312 (739)
+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++......+.||+++| +..|+.+++++|++.
T Consensus 82 ~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~ 161 (239)
T 1ycs_B 82 HTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGV 161 (239)
T ss_dssp CHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHH
T ss_pred CHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCCcchHHHHHHhhhccHHHHHHHHHh
Confidence 777777777777777666666777777777777777777777777666655444344677766 566667777777776
Q ss_pred CCCCCCC
Q psy903 313 GADQEHK 319 (739)
Q Consensus 313 ~~~~~~~ 319 (739)
|++++..
T Consensus 162 ~a~~~~~ 168 (239)
T 1ycs_B 162 QEKMGIM 168 (239)
T ss_dssp HHHTTTT
T ss_pred hhccccc
Confidence 6665544
No 80
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.93 E-value=1.5e-26 Score=215.97 Aligned_cols=181 Identities=22% Similarity=0.210 Sum_probs=129.4
Q ss_pred CCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHH
Q psy903 120 RPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAAS 199 (739)
Q Consensus 120 ~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~ 199 (739)
...+.|+|+.|+..|+.+.++.|++.|++++.. ..|.||||+|+..|+.+++++|++.|++++..+.. |.||||+|+.
T Consensus 2 ~~~g~t~L~~a~~~~~~~~~~~ll~~g~~~~~~-~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~-g~t~L~~A~~ 79 (239)
T 1ycs_B 2 EITGQVSLPPGKRTNLRKTGSERIAHGMRVKFN-PLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDE-GITALHNAVC 79 (239)
T ss_dssp ------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTT-SCCHHHHHHH
T ss_pred CccccccCchhhhhhhHHHHHHHhccCCCcccC-chhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCC-CCCHHHHHHH
Confidence 345789999999999999999999999999864 67899999999999999999999999998877655 5799999999
Q ss_pred cCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCC-cHHHHH--HhcCChHHHHHHH
Q psy903 200 SGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGH-TPLMEA--ASAGHVGVAKILL 276 (739)
Q Consensus 200 ~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~-t~L~~A--~~~~~~~ii~~Ll 276 (739)
.|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++..+..|. ||||+| +..|+.+++++|+
T Consensus 80 ~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll 159 (239)
T 1ycs_B 80 AGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLY 159 (239)
T ss_dssp HTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHH
T ss_pred cCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCCcchHHHHHHhhhccHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999998887 999999 7889999999999
Q ss_pred HcCCCCcccC--------cCccCCHHHHHHHcCC
Q psy903 277 EYGAGINTHS--------NEFKESALTLACYKGH 302 (739)
Q Consensus 277 ~~~~~~~~~~--------~~~~~~~l~~A~~~~~ 302 (739)
++|++++... +..+.+++++++..|.
T Consensus 160 ~~~a~~~~~~~~~~~al~d~~~~~~~eLa~~~G~ 193 (239)
T 1ycs_B 160 GVQEKMGIMNKGVIYALWDYEPQNDDELPMKEGD 193 (239)
T ss_dssp HHHHHTTTTGGGEEEESSCBCCSSTTBCCBCSSC
T ss_pred HhhhcccccccceEEEEeccCCCCCCcccccCCC
Confidence 9988765432 2234556665555554
No 81
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.92 E-value=3.5e-25 Score=186.37 Aligned_cols=134 Identities=22% Similarity=0.268 Sum_probs=119.1
Q ss_pred CCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCC-CC
Q psy903 146 GRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSS-GN 224 (739)
Q Consensus 146 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~-~~ 224 (739)
+++++..+..|.||||+|+..|+.+++++|++.|++++..+.. |+||||+|+. ++.+++++|+++|++++.++.. |.
T Consensus 2 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~-g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~ 79 (136)
T 1d9s_A 2 SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRF-GRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLT 79 (136)
T ss_dssp CCCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT-CCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTB
T ss_pred CCCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCC-CCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCC
Confidence 4678888899999999999999999999999999888776644 5699999999 9999999999999999999988 89
Q ss_pred cHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCCC
Q psy903 225 TPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAG 281 (739)
Q Consensus 225 t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~~ 281 (739)
||||+|+..|+.+++++|+++|++++.+|..|.|||++|+..++.+++++|+++|++
T Consensus 80 t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 80 RPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 999999999999999999999999999999999999999999999999999988764
No 82
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.92 E-value=1.3e-24 Score=183.01 Aligned_cols=134 Identities=19% Similarity=0.191 Sum_probs=106.4
Q ss_pred CCCCcccCCCCCcHHHHHHhcCcHHHHHHHHHccccccccCCCCCcchhHHHhhccccccccCCCCCCCHHHHHhhhhhh
Q psy903 21 GRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSV 100 (739)
Q Consensus 21 g~~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (739)
+++++..+..|+||||+|+..|+.+++++|+++|++++..+..+. ||||+|+. |
T Consensus 2 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~-t~L~~A~~-~------------------------ 55 (136)
T 1d9s_A 2 SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGR-RPIQVMMM-G------------------------ 55 (136)
T ss_dssp CCCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCC-TTTTTSTT-S------------------------
T ss_pred CCCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCC-CHHHHHHc-C------------------------
Confidence 578889999999999999999999999999999999988876665 88888776 5
Q ss_pred hchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCC-CCcHHHHHHHcCcHHHHHHHHhCC
Q psy903 101 SCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDE-GESLLSLACSAGYYELAQVLLAMH 179 (739)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~-g~t~L~~A~~~~~~~~v~~Ll~~~ 179 (739)
+.+++++|++.|++++..+.. |.||||+|+..|+.+++++|+++|
T Consensus 56 ----------------------------------~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 101 (136)
T 1d9s_A 56 ----------------------------------SAQVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAG 101 (136)
T ss_dssp ----------------------------------CHHHHHHHHHHTCCSSCCBTTTTBCHHHHHHHHTCHHHHHHHHHTC
T ss_pred ----------------------------------CHHHHHHHHHCCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 577888888888888888887 777888777777777777777777
Q ss_pred CCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCC
Q psy903 180 ANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGAD 215 (739)
Q Consensus 180 ~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~ 215 (739)
++++..+.. |.||||+|+..++.+++++|+++|+|
T Consensus 102 a~~~~~d~~-g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 102 ARLDVCDAW-GRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp CCCCCCSSS-SSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred CCCCccCCC-CCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 776655543 45777777777777777777766653
No 83
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.92 E-value=2.2e-25 Score=197.04 Aligned_cols=154 Identities=14% Similarity=0.151 Sum_probs=133.5
Q ss_pred chHHHHHHHcCCHHHHHHHHhcCCCCCcCC-CCCCcHHHHHHHcCcH----HHHHHHHhCCCCccccCCCCCCcHHHHHH
Q psy903 124 ERSLVQACSDGDVKTVKKLLTEGRSVHETT-DEGESLLSLACSAGYY----ELAQVLLAMHANVEDRGIKGECTPLMEAA 198 (739)
Q Consensus 124 ~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~-~~g~t~L~~A~~~~~~----~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~ 198 (739)
.++|+.|++.|+.+.++.+++.+. +..+ ..|.||||+|+..|+. +++++|++.|++++..+ ..|+||||+|+
T Consensus 7 ~~~l~~Aa~~g~~~~~~~l~~~~~--~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d-~~g~TpLh~a~ 83 (186)
T 3t8k_A 7 YRTVSAAAMLGTYEDFLELFEKGY--EDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRT-KEGTTLFFPLF 83 (186)
T ss_dssp CSSHHHHHHHSCHHHHHHHHHHSS--SCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCC-TTCCCTHHHHH
T ss_pred ccHHHHHHHcCCHHHHHHHHhcCc--ccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCC-CCCCcHHHHHH
Confidence 467999999999999999998764 4455 6799999999999864 58999999999998887 44579999999
Q ss_pred HcCc------HHHHHHHHHCCCCCCCCCCCCC-cHHHHHHhcC-----cHHHHHHHHH-CCCCCCCCCCCCCcHHHHHHh
Q psy903 199 SSGF------IEIVRLLINHGADVNGQSSSGN-TPLMYACAGG-----HEAVVRVLLE-CGANVEDHNENGHTPLMEAAS 265 (739)
Q Consensus 199 ~~~~------~~~~~~Ll~~g~~~~~~~~~~~-t~L~~A~~~~-----~~~~v~~Ll~-~~~~~~~~~~~~~t~L~~A~~ 265 (739)
..++ .+++++|+++|++++.+|..|. ||||+|+..+ +.+++++|++ +|++++.+|..|.||||+|++
T Consensus 84 ~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A~~ 163 (186)
T 3t8k_A 84 QGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKR 163 (186)
T ss_dssp HHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHT
T ss_pred HcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHHHH
Confidence 9886 6789999999999999999999 9999999844 4579999999 999999999999999999999
Q ss_pred cCChHHHHHHHHcCC
Q psy903 266 AGHVGVAKILLEYGA 280 (739)
Q Consensus 266 ~~~~~ii~~Ll~~~~ 280 (739)
.|+.+++++|.++..
T Consensus 164 ~~~~~~v~~L~~~~~ 178 (186)
T 3t8k_A 164 CQKPIALKMMEDYIK 178 (186)
T ss_dssp TTCHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHH
Confidence 999999999987644
No 84
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.92 E-value=2.6e-25 Score=196.53 Aligned_cols=162 Identities=14% Similarity=0.165 Sum_probs=124.1
Q ss_pred ChhhhhhcCCHHHHHHHHHcCCCCcccC-CCCCcHHHHHHhcCcH----HHHHHHHHccccccccCCCCCcchhHHHhhc
Q psy903 1 SLVQACSDGDVKTVKKLLTEGRSVHETT-DEGESLLSLACSAGYY----ELAQVLLAMHANVEDRGIKGECTPLMEAASS 75 (739)
Q Consensus 1 ~L~~A~~~g~~~~v~~ll~~g~~~~~~~-~~g~t~L~~A~~~~~~----~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~ 75 (739)
+|+.|++.|+++.++.++..+. +..+ ..|+||||+|+..|+. +++++|+++|++++..+..|. ||||+|+..
T Consensus 9 ~l~~Aa~~g~~~~~~~l~~~~~--~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~-TpLh~a~~~ 85 (186)
T 3t8k_A 9 TVSAAAMLGTYEDFLELFEKGY--EDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGT-TLFFPLFQG 85 (186)
T ss_dssp SHHHHHHHSCHHHHHHHHHHSS--SCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCC-CTHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHhcCc--ccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCC-cHHHHHHHc
Confidence 5899999999999999999764 4455 7799999999999964 599999999999999997776 999999987
Q ss_pred cccccccCCCCCCCHHHHHhhhhhhhchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCC
Q psy903 76 GFGKLATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDE 155 (739)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~ 155 (739)
|..++ .+..+++++|++.|++++.+|..
T Consensus 86 ~~~~~----------------------------------------------------~~~~~iv~~Ll~~Gadin~~d~~ 113 (186)
T 3t8k_A 86 GGNDI----------------------------------------------------TGTTELCKIFLEKGADITALYKP 113 (186)
T ss_dssp CTTCH----------------------------------------------------HHHHHHHHHHHHTTCCSSSCBGG
T ss_pred CCcch----------------------------------------------------hhHHHHHHHHHHCCCCCCccCCC
Confidence 72111 01257899999999999999999
Q ss_pred CC-cHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHH-CCCCCCCCCCCCCcHHHHHHhc
Q psy903 156 GE-SLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLIN-HGADVNGQSSSGNTPLMYACAG 233 (739)
Q Consensus 156 g~-t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~-~g~~~~~~~~~~~t~L~~A~~~ 233 (739)
|. ||||+|+..+..+ .+..+++++|++ +|++++.+|..|.||||+|+..
T Consensus 114 g~ttpLh~A~~~~~~~-----------------------------~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A~~~ 164 (186)
T 3t8k_A 114 YKIVVFKNIFNYFVDE-----------------------------NEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRC 164 (186)
T ss_dssp GTBCTTGGGGGCCSCH-----------------------------HHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHTT
T ss_pred cCchHHHHHHHcCCCh-----------------------------hhHHHHHHHHHHhcCCCCcccCCCCCCHHHHHHHc
Confidence 99 9999988744311 123456666666 6666666666666777777666
Q ss_pred CcHHHHHHHHHCC
Q psy903 234 GHEAVVRVLLECG 246 (739)
Q Consensus 234 ~~~~~v~~Ll~~~ 246 (739)
|+.+++++|.++.
T Consensus 165 ~~~~~v~~L~~~~ 177 (186)
T 3t8k_A 165 QKPIALKMMEDYI 177 (186)
T ss_dssp TCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHH
Confidence 6666666666544
No 85
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.91 E-value=1.5e-24 Score=187.44 Aligned_cols=144 Identities=18% Similarity=0.197 Sum_probs=99.1
Q ss_pred CcccCCCCCcHHHHHHhcCcHHHHHHHHHccccccccCCCCCcchhHHHhhccccccccCCCCCCCHHHHHhhhhhhhch
Q psy903 24 VHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVSCA 103 (739)
Q Consensus 24 ~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (739)
.+..+..|.||||+|+..|+.++|++|+++|++++..+..+. ||||+|+ .|
T Consensus 5 ~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~-t~L~~A~-~~--------------------------- 55 (156)
T 1bi7_B 5 AGSSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGR-RPIQVMM-MG--------------------------- 55 (156)
T ss_dssp -----CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSC-CTTTSSC-TT---------------------------
T ss_pred ccCCCccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCC-CHHHHHH-cC---------------------------
Confidence 345677899999999999999999999999999988887665 8888874 33
Q ss_pred HHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCc-HHHHHHHcCcHHHHHHHHhCCCCc
Q psy903 104 LDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGES-LLSLACSAGYYELAQVLLAMHANV 182 (739)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~~~~~ 182 (739)
+.+++++|++.|++++..+..|.| |||+|+..|+.+++++|+++|+++
T Consensus 56 -------------------------------~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~A~~~~~~~~v~~Ll~~ga~~ 104 (156)
T 1bi7_B 56 -------------------------------SARVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARL 104 (156)
T ss_dssp -------------------------------CHHHHHHHHTTTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCS
T ss_pred -------------------------------CHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHHCCCHHHHHHHHHcCCCC
Confidence 578888899888888888888887 888887777777777777777776
Q ss_pred cccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHH
Q psy903 183 EDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLM 228 (739)
Q Consensus 183 ~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~ 228 (739)
+..+.. |.||||+|+..|+.+++++|+++|++++.++..|.||.+
T Consensus 105 ~~~d~~-g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~~~ 149 (156)
T 1bi7_B 105 DVRDAW-GRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARIDAAE 149 (156)
T ss_dssp SCCCTT-CCCHHHHHHHHTCHHHHHHHSSCC---------------
T ss_pred cccCCC-CCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCcCcccc
Confidence 655543 357777777777777777777777777777777666655
No 86
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.91 E-value=1.9e-24 Score=186.89 Aligned_cols=141 Identities=23% Similarity=0.293 Sum_probs=95.0
Q ss_pred CCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCc-HHHHHH
Q psy903 120 RPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECT-PLMEAA 198 (739)
Q Consensus 120 ~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t-~L~~A~ 198 (739)
...+.|+|+.|+..|+.+++++|++.|++++..+..|.||||+|+ .|+.+++++|++.|++++..+..+ .| |||+|+
T Consensus 9 ~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g-~ttpL~~A~ 86 (156)
T 1bi7_B 9 MEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPAT-LTRPVHDAA 86 (156)
T ss_dssp -CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTT-CCCHHHHHH
T ss_pred CccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCC-CcHHHHHHH
Confidence 345677788888888888888888777777777777778887774 777777888877777777666544 46 777777
Q ss_pred HcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHH
Q psy903 199 SSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLME 262 (739)
Q Consensus 199 ~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~ 262 (739)
..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++..+..|.||.+.
T Consensus 87 ~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~~~~ 150 (156)
T 1bi7_B 87 REGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARIDAAEG 150 (156)
T ss_dssp HHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC----------------
T ss_pred HCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCcCccccc
Confidence 7777777777777777777777777777777777777777777777777777777777777654
No 87
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.90 E-value=3.2e-23 Score=174.36 Aligned_cols=121 Identities=32% Similarity=0.456 Sum_probs=52.6
Q ss_pred CchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCc
Q psy903 123 NERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGF 202 (739)
Q Consensus 123 ~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~ 202 (739)
+.|+|+.|+..|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|+++|++++..+.. |.||||+|+..|+
T Consensus 14 ~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~-g~t~L~~A~~~~~ 92 (136)
T 2jab_A 14 LGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAI-GFTPLHLAAFIGH 92 (136)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT-CCCHHHHHHHHTC
T ss_pred ccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCC-CCCHHHHHHHcCC
Confidence 344444444444444444444444444444444444444444444444444444444444333322 2344444444444
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHH
Q psy903 203 IEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLE 244 (739)
Q Consensus 203 ~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~ 244 (739)
.+++++|+++|++++.+|..|.||||+|+..|+.+++++|++
T Consensus 93 ~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~ 134 (136)
T 2jab_A 93 LEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQK 134 (136)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHH
Confidence 444444444444444444444444444444444444444443
No 88
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.90 E-value=7.1e-23 Score=170.54 Aligned_cols=124 Identities=45% Similarity=0.691 Sum_probs=80.3
Q ss_pred CCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCc
Q psy903 156 GESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGH 235 (739)
Q Consensus 156 g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~ 235 (739)
|.||||+|+..|+.+++++|++.|++++..+.. |.||||+|+..++.+++++|+++|++++.++..|.||||+|+..++
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~-g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~ 80 (126)
T 1n0r_A 2 GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKN-GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH 80 (126)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTT-SCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCC-CCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCh
Confidence 556666666666666666666666665554433 3466666666666666666666666666666666666666666666
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCC
Q psy903 236 EAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGA 280 (739)
Q Consensus 236 ~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~ 280 (739)
.+++++|+++|++++.+|..|.|||++|+..++.+++++|+++|+
T Consensus 81 ~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Ga 125 (126)
T 1n0r_A 81 LEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 125 (126)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTC
T ss_pred HHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCC
Confidence 666666666666666666666666666666666666666666654
No 89
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.90 E-value=4.6e-23 Score=173.39 Aligned_cols=127 Identities=32% Similarity=0.424 Sum_probs=118.6
Q ss_pred CCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHH
Q psy903 152 TTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYAC 231 (739)
Q Consensus 152 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~ 231 (739)
....+.||||+|+..|+.+++++|++.|++++..+.. |.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+
T Consensus 10 ~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~-g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~ 88 (136)
T 2jab_A 10 HGSDLGKKLLEAARAGQDDEVRILMANGADVNAKDEY-GLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAA 88 (136)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT-SCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHH
T ss_pred ccccccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCC-CCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHH
Confidence 3456789999999999999999999999998877644 579999999999999999999999999999999999999999
Q ss_pred hcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcC
Q psy903 232 AGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYG 279 (739)
Q Consensus 232 ~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~ 279 (739)
..|+.+++++|+++|++++..|..|.|||++|+..|+.+++++|+++|
T Consensus 89 ~~~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 89 FIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred HcCCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 999999999999999999999999999999999999999999999876
No 90
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.89 E-value=2.7e-22 Score=166.97 Aligned_cols=125 Identities=38% Similarity=0.587 Sum_probs=119.6
Q ss_pred CchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCc
Q psy903 123 NERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGF 202 (739)
Q Consensus 123 ~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~ 202 (739)
+.|+|+.|+..|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|++.|++++..+.. |.||||+|+..++
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~-g~t~l~~A~~~~~ 80 (126)
T 1n0r_A 2 GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKN-GRTPLHLAARNGH 80 (126)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT-SCCHHHHHHHTTC
T ss_pred CccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCC-CCcHHHHHHHcCh
Confidence 679999999999999999999999999999999999999999999999999999999998877655 5699999999999
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCC
Q psy903 203 IEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGAN 248 (739)
Q Consensus 203 ~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~ 248 (739)
.+++++|+++|++++.++..|.|||++|+..|+.+++++|+++|++
T Consensus 81 ~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 81 LEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred HHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 9999999999999999999999999999999999999999999975
No 91
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.88 E-value=2.6e-23 Score=175.39 Aligned_cols=133 Identities=27% Similarity=0.344 Sum_probs=106.6
Q ss_pred CCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCc
Q psy903 146 GRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNT 225 (739)
Q Consensus 146 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t 225 (739)
|+|+ .++..|.||||+|+..|+.+++++|++.|++++..+.. |.||||+|+..|+.+++++|+++|++++.+|..|.|
T Consensus 1 G~d~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~-g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t 78 (137)
T 3c5r_A 1 GIDP-FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHA-GWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDS 78 (137)
T ss_dssp ---C-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTT-SCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCC
T ss_pred CCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCC-CCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCC
Confidence 4566 67788888888888888888888888888888766544 468888888888888888888888888888888888
Q ss_pred HHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCC
Q psy903 226 PLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGA 280 (739)
Q Consensus 226 ~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~ 280 (739)
|||+|+..|+.+++++|+++|++++.+|..|.|||++|+..+..+++++|.+.+.
T Consensus 79 ~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~~ 133 (137)
T 3c5r_A 79 PLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNES 133 (137)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC-----
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHHhhcccccc
Confidence 8888888888888888888888888888888888888888888888877766543
No 92
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.88 E-value=1.1e-23 Score=187.45 Aligned_cols=140 Identities=26% Similarity=0.230 Sum_probs=107.3
Q ss_pred CCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCC-CCCCcHHHHHH
Q psy903 153 TDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQS-SSGNTPLMYAC 231 (739)
Q Consensus 153 ~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~-~~~~t~L~~A~ 231 (739)
+..|.||||+|+..|+.+++++|++ +++++..+. .|+||||+|+..|+.+++++|+++|++++.++ ..|.||||+|+
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~-~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~ 118 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDE-NGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAA 118 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCT-TSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHH
Confidence 4467788888888888888888888 777766554 34688888888888888888888888887777 77888888888
Q ss_pred hcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCCCCcccCcCccCCHHHHHHHcCCHHHHHHHHH
Q psy903 232 AGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLS 311 (739)
Q Consensus 232 ~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~ 311 (739)
..|+.+++++|+++|++++.+|..|.||||+|+..++. ..+.+++++|+..|..+++++|.+
T Consensus 119 ~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~------------------~~~~~~l~~a~~~~~~~i~~~L~~ 180 (183)
T 3deo_A 119 GYVRPEVVEALVELGADIEVEDERGLTALELAREILKT------------------TPKGNPMQFGRRIGLEKVINVLEG 180 (183)
T ss_dssp HTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHHHT------------------CCCCSHHHHHHHHHHHHHHHHHHT
T ss_pred hcCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhccC------------------cccccHHHHHHHcCHHHHHHHHHH
Confidence 88888888888888888888888888888888764322 125578888888888888888765
Q ss_pred c
Q psy903 312 A 312 (739)
Q Consensus 312 ~ 312 (739)
+
T Consensus 181 ~ 181 (183)
T 3deo_A 181 Q 181 (183)
T ss_dssp C
T ss_pred h
Confidence 4
No 93
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.87 E-value=4.9e-22 Score=176.81 Aligned_cols=139 Identities=23% Similarity=0.270 Sum_probs=128.8
Q ss_pred CCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcC
Q psy903 122 QNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSG 201 (739)
Q Consensus 122 ~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~ 201 (739)
.+.|+|+.|+..|+.++++.|++ |.+++..+..|.||||+|+..|+.+++++|+++|++++..+...|+||||+|+..|
T Consensus 43 ~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~~~ 121 (183)
T 3deo_A 43 EYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYV 121 (183)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHHTT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHhcC
Confidence 45799999999999999999999 99999999999999999999999999999999999999888677889999999999
Q ss_pred cHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHc
Q psy903 202 FIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEY 278 (739)
Q Consensus 202 ~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~ 278 (739)
+.+++++|+++|++++.+|..|.||||+|+..++. ..+.++|++|+..|..+++++|.++
T Consensus 122 ~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~-----------------~~~~~~l~~a~~~~~~~i~~~L~~~ 181 (183)
T 3deo_A 122 RPEVVEALVELGADIEVEDERGLTALELAREILKT-----------------TPKGNPMQFGRRIGLEKVINVLEGQ 181 (183)
T ss_dssp CHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHHHT-----------------CCCCSHHHHHHHHHHHHHHHHHHTC
T ss_pred cHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhccC-----------------cccccHHHHHHHcCHHHHHHHHHHh
Confidence 99999999999999999999999999999874322 3456899999999999999999865
No 94
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.87 E-value=7.2e-22 Score=184.42 Aligned_cols=138 Identities=23% Similarity=0.270 Sum_probs=101.7
Q ss_pred CchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCc
Q psy903 123 NERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGF 202 (739)
Q Consensus 123 ~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~ 202 (739)
+.|+||.|+..|+.+++++|++ |++++..+..|.||||+|+..|+.++|++|+++|++++..+...|+||||+|+..|+
T Consensus 45 g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~g~ 123 (244)
T 3ui2_A 45 YETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVR 123 (244)
T ss_dssp HHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHTTC
T ss_pred CCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHcCC
Confidence 4677888888888888888887 777777777788888888887888888888777777777665656677777777777
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHc
Q psy903 203 IEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEY 278 (739)
Q Consensus 203 ~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~ 278 (739)
.+++++|+++|++++.+|..|.||||+|+..++ ...+.|||++|+..|+.+++++|+++
T Consensus 124 ~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~-----------------~~~~~~~l~~a~~~g~~~iv~~L~~~ 182 (244)
T 3ui2_A 124 PEVVEALVELGADIEVEDERGLTALELAREILK-----------------TTPKGNPMQFGRRIGLEKVINVLEGQ 182 (244)
T ss_dssp HHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHHT-----------------TCCCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHh-----------------ccCCCCHHHHHHHcChHHHHHHHHHh
Confidence 777777777777777777777777777765211 13455677777777777777777664
No 95
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.86 E-value=3e-21 Score=185.30 Aligned_cols=137 Identities=20% Similarity=0.192 Sum_probs=66.4
Q ss_pred chHHHHHHHcCCHHHHHHHHhcCCCCCc------CCCCCCcHHHHHHHc---CcHHHHHHHHhCCCCccccCCCCCCcHH
Q psy903 124 ERSLVQACSDGDVKTVKKLLTEGRSVHE------TTDEGESLLSLACSA---GYYELAQVLLAMHANVEDRGIKGECTPL 194 (739)
Q Consensus 124 ~~~l~~A~~~~~~~~~~~ll~~~~~~~~------~~~~g~t~L~~A~~~---~~~~~v~~Ll~~~~~~~~~~~~~~~t~L 194 (739)
.++|+.|+..|+.+.++.|++.|++++. .+..|.||||+|+.. |+.+++++|+++|++++..+. .|.|||
T Consensus 152 ~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~-~G~TpL 230 (301)
T 2b0o_E 152 PQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAA-DGNTAL 230 (301)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCT-TCCCHH
T ss_pred HHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCC-CCCCHH
Confidence 3455555555555555555555555554 344555555555554 445555555555554444432 233555
Q ss_pred HHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcC
Q psy903 195 MEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAG 267 (739)
Q Consensus 195 ~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~ 267 (739)
|+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++ .|.||||+|+..|
T Consensus 231 h~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~------~g~tpLh~A~~~g 297 (301)
T 2b0o_E 231 HYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAG------TFAFPLHVDYSWV 297 (301)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH------TTSSCCC------
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC------CCCChhHHHHhcC
Confidence 555555555555555555555555555555555555555555555555544432 2344444444443
No 96
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.86 E-value=8.3e-22 Score=166.15 Aligned_cols=122 Identities=33% Similarity=0.410 Sum_probs=69.7
Q ss_pred CCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCC
Q psy903 189 GECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGH 268 (739)
Q Consensus 189 ~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~ 268 (739)
.|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+
T Consensus 9 ~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 88 (137)
T 3c5r_A 9 RGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAAKNGH 88 (137)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCHHHHHHHcCC
Confidence 34566666666666666666666666666666666666666666666666666666666666555555566666665555
Q ss_pred hHHHHHHHHcCCCCcccCcCccCCHHHHHHHcCCHHHHHHHHH
Q psy903 269 VGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLS 311 (739)
Q Consensus 269 ~~ii~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~ 311 (739)
.+++++|+++|++++.. +..|.||+++|+..+..+++++|.+
T Consensus 89 ~~~v~~Ll~~ga~~~~~-~~~g~tpl~~A~~~~~~~~l~~l~~ 130 (137)
T 3c5r_A 89 VDIVKLLLSYGASRNAV-NIFGLRPVDYTDDESMKSLLLLPEK 130 (137)
T ss_dssp HHHHHHHHHTTCCTTCC-CTTSCCGGGGCCCHHHHHHHSCC--
T ss_pred HHHHHHHHHcCCCCCCC-CCCCCCHHHHHhhccHHHHHhhccc
Confidence 55555555555555443 3335555555555555555544443
No 97
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.86 E-value=1.5e-21 Score=182.28 Aligned_cols=142 Identities=25% Similarity=0.215 Sum_probs=126.5
Q ss_pred CCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCC-CCCCcHHHHHH
Q psy903 153 TDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQS-SSGNTPLMYAC 231 (739)
Q Consensus 153 ~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~-~~~~t~L~~A~ 231 (739)
+..|.||||+|+..|+.+++++|++ |++++..+.. |+||||+|+..|+.+++++|+++|++++.++ ..|.||||+|+
T Consensus 42 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~-g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~ 119 (244)
T 3ui2_A 42 VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDEN-GRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAA 119 (244)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTT-SCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHH
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCC-CCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHH
Confidence 3568899999999999999999999 8888877654 5799999999999999999999999999988 88999999999
Q ss_pred hcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCCCCcccCcCccCCHHHHHHHcCCHHHHHHHHH
Q psy903 232 AGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLS 311 (739)
Q Consensus 232 ~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~ 311 (739)
..|+.+++++|+++|++++.+|..|.||||+|+..++ ...+.++|++|+..|+.+++++|.+
T Consensus 120 ~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~------------------~~~~~~~l~~a~~~g~~~iv~~L~~ 181 (244)
T 3ui2_A 120 GYVRPEVVEALVELGADIEVEDERGLTALELAREILK------------------TTPKGNPMQFGRRIGLEKVINVLEG 181 (244)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHHT------------------TCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHh------------------ccCCCCHHHHHHHcChHHHHHHHHH
Confidence 9999999999999999999999999999999986322 1236799999999999999999988
Q ss_pred cCC
Q psy903 312 AGA 314 (739)
Q Consensus 312 ~~~ 314 (739)
.+.
T Consensus 182 ~~~ 184 (244)
T 3ui2_A 182 QVF 184 (244)
T ss_dssp HHE
T ss_pred hcc
Confidence 644
No 98
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.85 E-value=1.5e-21 Score=160.86 Aligned_cols=108 Identities=27% Similarity=0.326 Sum_probs=60.8
Q ss_pred CCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcC
Q psy903 155 EGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGG 234 (739)
Q Consensus 155 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~ 234 (739)
.|.||||+|+..|+.+++++|++.|++++..+.. |+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|
T Consensus 6 ~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~-g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~ 84 (123)
T 3aaa_C 6 MCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEG-GRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEG 84 (123)
T ss_dssp -CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTT-SSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred ccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCC-CCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcC
Confidence 3445555555555555555555555555444322 345555555555555555555555555555555566666666666
Q ss_pred cHHHHHHHHHCCCCCCCCCCCCCcHHHHH
Q psy903 235 HEAVVRVLLECGANVEDHNENGHTPLMEA 263 (739)
Q Consensus 235 ~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A 263 (739)
+.+++++|+++|++++.+|..|.|||++|
T Consensus 85 ~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A 113 (123)
T 3aaa_C 85 HVSCVKLLLSKGADKTVKGPDGLTAFEAT 113 (123)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHC
T ss_pred CHHHHHHHHHcCCCCCCcCCCCCCHHHHh
Confidence 66666666666655555555566666555
No 99
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.85 E-value=1.9e-21 Score=186.72 Aligned_cols=138 Identities=22% Similarity=0.166 Sum_probs=81.2
Q ss_pred cHHHHHHHcCcHHHHHHHHhCCCCcccc-----CCCCCCcHHHHHHHc---CcHHHHHHHHHCCCCCCCCCCCCCcHHHH
Q psy903 158 SLLSLACSAGYYELAQVLLAMHANVEDR-----GIKGECTPLMEAASS---GFIEIVRLLINHGADVNGQSSSGNTPLMY 229 (739)
Q Consensus 158 t~L~~A~~~~~~~~v~~Ll~~~~~~~~~-----~~~~~~t~L~~A~~~---~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~ 229 (739)
++|+.|+..|+.+.++.|++.|++++.. .+..|.||||+|+.. ++.+++++|+++|++++.+|..|.||||+
T Consensus 153 ~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpLh~ 232 (301)
T 2b0o_E 153 QRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHY 232 (301)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHHHH
T ss_pred HHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHHHH
Confidence 4566666666666666666666665542 233445666666665 56666666666666666666666666666
Q ss_pred HHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCCCCcccCcCccCCHHHHHHHcCC
Q psy903 230 ACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGH 302 (739)
Q Consensus 230 A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~ 302 (739)
|+..|+.+++++|+++|++++.+|..|.|||++|+..|+.+++++|+++|++ .+.||||+|+..|+
T Consensus 233 A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~-------~g~tpLh~A~~~g~ 298 (301)
T 2b0o_E 233 AALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAG-------TFAFPLHVDYSWVI 298 (301)
T ss_dssp HHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH-------TTSSCCC-------
T ss_pred HHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC-------CCCChhHHHHhcCC
Confidence 6666666666666666666666666666666666666666666666665543 24466666665543
No 100
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.84 E-value=6.8e-21 Score=156.94 Aligned_cols=118 Identities=25% Similarity=0.399 Sum_probs=106.5
Q ss_pred CCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHH
Q psy903 120 RPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAAS 199 (739)
Q Consensus 120 ~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~ 199 (739)
...+.++|+.|+..|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|++.|++++..+.. |+||||+|+.
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~-g~tpL~~A~~ 82 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKH-HITPLLSAVY 82 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTT-SCCHHHHHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCC-CCCHHHHHHH
Confidence 346789999999999999999999999999999999999999999999999999999999999887755 5699999999
Q ss_pred cCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHH
Q psy903 200 SGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAV 238 (739)
Q Consensus 200 ~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~ 238 (739)
.|+.+++++|+++|++++.+|..|.||||+|...+..++
T Consensus 83 ~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~l 121 (123)
T 3aaa_C 83 EGHVSCVKLLLSKGADKTVKGPDGLTAFEATDNQAIKAL 121 (123)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCCHHHHHH
T ss_pred cCCHHHHHHHHHcCCCCCCcCCCCCCHHHHhCCHHHHHH
Confidence 999999999999999999999999999999954444443
No 101
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.83 E-value=3.1e-20 Score=192.76 Aligned_cols=143 Identities=17% Similarity=0.058 Sum_probs=109.2
Q ss_pred cCCCCCcHHHHHHhcCcHHHHHHHHHcccccccc------CCCCCcchhHHHhhccccccccCCCCCCCHHHHHhhhhhh
Q psy903 27 TTDEGESLLSLACSAGYYELAQVLLAMHANVEDR------GIKGECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSV 100 (739)
Q Consensus 27 ~~~~g~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~------~~~~~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (739)
+.....+.||.|+..|+.++|+.|+++|++++.. +..|. ||||+|+...
T Consensus 128 ~~~~~~~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~-t~Lh~A~~~a------------------------ 182 (497)
T 3lvq_E 128 RCTPEPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEE-LVLHLAVKVA------------------------ 182 (497)
T ss_dssp CCC-CHHHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCB-CHHHHHHHTC------------------------
T ss_pred cccccHHHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccc-hHHHHHHHhc------------------------
Confidence 3444457899999999999999999999998866 55554 9999997522
Q ss_pred hchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCC
Q psy903 101 SCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHA 180 (739)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~ 180 (739)
..|+.+++++|++.|++++.+|..|.||||+|+..|+.++|++|+++|+
T Consensus 183 -------------------------------~~g~~~~v~~Ll~~ga~vn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga 231 (497)
T 3lvq_E 183 -------------------------------NQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRA 231 (497)
T ss_dssp -------------------------------CTTTHHHHHHHHHHSCCTTCCCSSSCCHHHHHTTTTCHHHHHHHHHTCC
T ss_pred -------------------------------ccccHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCC
Confidence 2457889999999999999999999999999999999999999999999
Q ss_pred CccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHh
Q psy903 181 NVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACA 232 (739)
Q Consensus 181 ~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~ 232 (739)
+++..+.. |.||||+|+..|+.+++++|+++|++++. +|+|.+..
T Consensus 232 ~~~~~d~~-g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~------~~~h~~~~ 276 (497)
T 3lvq_E 232 LVGTVNEA-GETALDIARKKHHKECEELLEQAQAGTFA------FPLHVDYS 276 (497)
T ss_dssp CCSCCCTT-CCCHHHHHHHTTCHHHHHHHHHTCC------------------
T ss_pred CCCCcCCC-CCCHHHHHHHcCCHHHHHHHHHhCCCCCC------Ccceeecc
Confidence 98877654 56999999999999999999999998865 56666554
No 102
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.83 E-value=7.7e-21 Score=175.47 Aligned_cols=129 Identities=22% Similarity=0.206 Sum_probs=71.3
Q ss_pred CCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHC-CCCCCCCCCCCCcHHHHHH
Q psy903 153 TDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINH-GADVNGQSSSGNTPLMYAC 231 (739)
Q Consensus 153 ~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~~~t~L~~A~ 231 (739)
+..|.||||+|+..|+.+++++|++.|++++..+.. |+||||+|+..|+.+++++|+++ |++++.+|..|.||||+|+
T Consensus 70 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~-g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~ 148 (222)
T 3ehr_A 70 AESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKA-GSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAA 148 (222)
T ss_dssp EEEESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT-SCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHH
T ss_pred ccccccccccccccCcHHHHHHHHhCCCCccccCCC-CCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHH
Confidence 344555666666666666666666665555544432 34666666666666666666655 6666666666666666666
Q ss_pred hcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCCCC
Q psy903 232 AGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGI 282 (739)
Q Consensus 232 ~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~~~ 282 (739)
..|+.+++++|+++|++++.+|..|.|||++|+..+..++++.|++.++..
T Consensus 149 ~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~ 199 (222)
T 3ehr_A 149 WKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVR 199 (222)
T ss_dssp HHTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC---------
T ss_pred HcCCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHHHhccchhh
Confidence 666666666666666666666666666666666666666666665555443
No 103
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.83 E-value=1.2e-20 Score=174.19 Aligned_cols=134 Identities=19% Similarity=0.271 Sum_probs=112.8
Q ss_pred CCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhC-CCCccccCCCCCCcHHHHHHHc
Q psy903 122 QNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAM-HANVEDRGIKGECTPLMEAASS 200 (739)
Q Consensus 122 ~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~~~~~t~L~~A~~~ 200 (739)
.+.|+|+.|+..|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|++. |++++..+.. |.||||+|+..
T Consensus 72 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~-g~tpL~~A~~~ 150 (222)
T 3ehr_A 72 SIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKL-GDTALHAAAWK 150 (222)
T ss_dssp EESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTT-SCCHHHHHHHH
T ss_pred ccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCC-CCCHHHHHHHc
Confidence 467999999999999999999999999999999999999999999999999999999 8998877655 56999999999
Q ss_pred CcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCC
Q psy903 201 GFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENG 256 (739)
Q Consensus 201 ~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~ 256 (739)
|+.+++++|+++|++++.++..|.|||++|+..++.++++.|++.|+.....+..+
T Consensus 151 ~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~~~~~~ 206 (222)
T 3ehr_A 151 GYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLSNAED 206 (222)
T ss_dssp TCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC----------------
T ss_pred CCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHHHhccchhhhccchhh
Confidence 99999999999999999999999999999999999999999999998876655443
No 104
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.83 E-value=2.4e-19 Score=170.03 Aligned_cols=92 Identities=29% Similarity=0.433 Sum_probs=51.3
Q ss_pred CCcHHHHHHHc---CcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhc
Q psy903 190 ECTPLMEAASS---GFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASA 266 (739)
Q Consensus 190 ~~t~L~~A~~~---~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~ 266 (739)
|.||||+|+.. |+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..
T Consensus 169 g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~ 248 (278)
T 1dcq_A 169 DETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRL 248 (278)
T ss_dssp TCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred CCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHc
Confidence 34555555555 455555555555555555555555555555555555555555555555555555555555555555
Q ss_pred CChHHHHHHHHcCCC
Q psy903 267 GHVGVAKILLEYGAG 281 (739)
Q Consensus 267 ~~~~ii~~Ll~~~~~ 281 (739)
|+.+++++|+++|+.
T Consensus 249 ~~~~~v~~Ll~~ga~ 263 (278)
T 1dcq_A 249 KHEHCEELLTQALSG 263 (278)
T ss_dssp TCHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHcCCC
Confidence 555555555555443
No 105
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.82 E-value=7.7e-20 Score=141.70 Aligned_cols=91 Identities=51% Similarity=0.775 Sum_probs=72.4
Q ss_pred CCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCCh
Q psy903 190 ECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHV 269 (739)
Q Consensus 190 ~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~ 269 (739)
|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~ 81 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHL 81 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCH
Confidence 45788888888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred HHHHHHHHcCC
Q psy903 270 GVAKILLEYGA 280 (739)
Q Consensus 270 ~ii~~Ll~~~~ 280 (739)
+++++|+++|+
T Consensus 82 ~~~~~Ll~~ga 92 (93)
T 1n0q_A 82 EVVKLLLEAGA 92 (93)
T ss_dssp HHHHHHHHTTC
T ss_pred HHHHHHHHcCC
Confidence 88888887765
No 106
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.81 E-value=9.5e-20 Score=178.38 Aligned_cols=126 Identities=25% Similarity=0.312 Sum_probs=104.7
Q ss_pred CCCcHHHHHHHc-CcHHHHHHHHhCCCCccccCC-CCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHh
Q psy903 155 EGESLLSLACSA-GYYELAQVLLAMHANVEDRGI-KGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACA 232 (739)
Q Consensus 155 ~g~t~L~~A~~~-~~~~~v~~Ll~~~~~~~~~~~-~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~ 232 (739)
.+.|+||.|+.. |+.+++++|++.|++++..+. ..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+.
T Consensus 198 ~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~~ 277 (368)
T 3jue_A 198 HPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATI 277 (368)
T ss_dssp CHHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHH
Confidence 345788888888 888888888888888877652 455688888888888888888888888888888888888888888
Q ss_pred cCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCC
Q psy903 233 GGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGA 280 (739)
Q Consensus 233 ~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~ 280 (739)
.|+.+++++|+++|++++..|..|.||||+|+..++.+++++|++.+.
T Consensus 278 ~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~ 325 (368)
T 3jue_A 278 LGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLAKM 325 (368)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC
T ss_pred cCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCC
Confidence 888888888888888888888888888888888888888888887653
No 107
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.81 E-value=5e-19 Score=167.87 Aligned_cols=192 Identities=19% Similarity=0.135 Sum_probs=125.8
Q ss_pred CCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCc-CCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHH
Q psy903 119 PRPQNERSLVQACSDGDVKTVKKLLTEGRSVHE-TTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEA 197 (739)
Q Consensus 119 ~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A 197 (739)
.+..+.+.++.+...|+....+.+...-.+... ....+... .....+-..+++................++|+.|
T Consensus 62 ~d~~~~~~l~~~~~~GN~~~n~i~e~~l~~~~~~kP~~~s~~----~~~~~fI~aKYl~~~f~~~~~~~~~~~l~~l~~a 137 (278)
T 1dcq_A 62 LDVLGTSELLLAKNIGNAGFNEIMECCLPSEDPVKPNPGSDM----IARKDYITAKYMERRYARKKHADTAAKLHSLCEA 137 (278)
T ss_dssp TSCCCGGGGHHHHHSCHHHHHHHHTTTCCSSSCCSCCTTCCH----HHHHHHHHHHHTTCTTSCCCSSSHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHcCcHHHHHHHHhhCChhhcCCCCCCCCH----HHHHHHHHHHHHHhhcccccccccchhhhhhhhH
Confidence 344566677777777776665554332111111 10111111 1112222233444333322222222234778888
Q ss_pred HHcCcHHHHHHHHHCCCCC------CCCCCCCCcHHHHHHhc---CcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCC
Q psy903 198 ASSGFIEIVRLLINHGADV------NGQSSSGNTPLMYACAG---GHEAVVRVLLECGANVEDHNENGHTPLMEAASAGH 268 (739)
Q Consensus 198 ~~~~~~~~~~~Ll~~g~~~------~~~~~~~~t~L~~A~~~---~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~ 268 (739)
+..|+.+.++.+++.|+++ +..+..|.||||+|+.. |+.+++++|+++|++++.+|..|.||||+|+..|+
T Consensus 138 ~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~ 217 (278)
T 1dcq_A 138 VKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDN 217 (278)
T ss_dssp HHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHHHHHTTC
T ss_pred hhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCC
Confidence 8888888888888888874 34477788888888887 78888888888888888888888888888888888
Q ss_pred hHHHHHHHHcCCCCcccCcCccCCHHHHHHHcCCHHHHHHHHHcCCC
Q psy903 269 VGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGAD 315 (739)
Q Consensus 269 ~~ii~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~ 315 (739)
.+++++|+++|++++.. +..|.||||+|+..|+.+++++|++.|++
T Consensus 218 ~~~v~~Ll~~gad~~~~-d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~ 263 (278)
T 1dcq_A 218 AECLKLLLRGKASIEIA-NESGETPLDIAKRLKHEHCEELLTQALSG 263 (278)
T ss_dssp HHHHHHHHHTTCCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHcCCCCCCc-cCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 88888888888887764 44578888888888888888888887764
No 108
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.80 E-value=2.4e-19 Score=175.48 Aligned_cols=142 Identities=22% Similarity=0.245 Sum_probs=117.0
Q ss_pred CchHHHHHHHc-CCHHHHHHHHhcCCCCCcCC--CCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHH
Q psy903 123 NERSLVQACSD-GDVKTVKKLLTEGRSVHETT--DEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAAS 199 (739)
Q Consensus 123 ~~~~l~~A~~~-~~~~~~~~ll~~~~~~~~~~--~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~ 199 (739)
..++|+.|+.. |+.++++.|++.|++++..+ ..|.||||+|+..|+.+++++|+++|++++..+.. |.||||+|+.
T Consensus 199 ~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~-G~TpLh~A~~ 277 (368)
T 3jue_A 199 PGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSA-GRGPLHHATI 277 (368)
T ss_dssp HHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT-SCCHHHHHHH
T ss_pred CCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCC-CCCHHHHHHH
Confidence 46799999999 99999999999999999998 88999999999999999999999999999877654 5699999999
Q ss_pred cCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCC---CCCCCCCCCCcHHHHHHh
Q psy903 200 SGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGA---NVEDHNENGHTPLMEAAS 265 (739)
Q Consensus 200 ~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~---~~~~~~~~~~t~L~~A~~ 265 (739)
.|+.+++++|+++|++++.+|..|.||||+|+..++.+++++|++.+. +....+..+.|+++.+..
T Consensus 278 ~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~~ 346 (368)
T 3jue_A 278 LGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIFRD 346 (368)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC---------------------
T ss_pred cCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHHHH
Confidence 999999999999999999999999999999999999999999998753 333344556666666543
No 109
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.80 E-value=4.4e-19 Score=184.14 Aligned_cols=124 Identities=23% Similarity=0.223 Sum_probs=59.6
Q ss_pred HHHHHHHcCcHHHHHHHHhCCCCcccc-----CCCCCCcHHHHHHH---cCcHHHHHHHHHCCCCCCCCCCCCCcHHHHH
Q psy903 159 LLSLACSAGYYELAQVLLAMHANVEDR-----GIKGECTPLMEAAS---SGFIEIVRLLINHGADVNGQSSSGNTPLMYA 230 (739)
Q Consensus 159 ~L~~A~~~~~~~~v~~Ll~~~~~~~~~-----~~~~~~t~L~~A~~---~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A 230 (739)
.||.|+..|+.+.++.|++.|++++.. .+..|.||||+|+. .|+.+++++|+++|+++|.+|..|.||||+|
T Consensus 135 ~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpLh~A 214 (497)
T 3lvq_E 135 RLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYA 214 (497)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHHHHH
T ss_pred HHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHHHHH
Confidence 444444444444444444444444332 12223455555533 4445555555555555555555555555555
Q ss_pred HhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCCCC
Q psy903 231 CAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGI 282 (739)
Q Consensus 231 ~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~~~ 282 (739)
+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|+++
T Consensus 215 ~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~ 266 (497)
T 3lvq_E 215 ALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGT 266 (497)
T ss_dssp TTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC--
T ss_pred HHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCC
Confidence 5555555555555555555555555555555555555555555555554443
No 110
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.80 E-value=5e-19 Score=137.10 Aligned_cols=93 Identities=42% Similarity=0.644 Sum_probs=78.5
Q ss_pred CCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcC
Q psy903 155 EGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGG 234 (739)
Q Consensus 155 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~ 234 (739)
+|.||||+|+..|+.+++++|++.|++++..+.. |.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~-g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~ 79 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKN-GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNG 79 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT-SCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCC-CCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Confidence 3778888888888888888888888888776644 468999999888999999999999998888888999999999999
Q ss_pred cHHHHHHHHHCCCC
Q psy903 235 HEAVVRVLLECGAN 248 (739)
Q Consensus 235 ~~~~v~~Ll~~~~~ 248 (739)
+.+++++|+++|++
T Consensus 80 ~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 80 HLEVVKLLLEAGAY 93 (93)
T ss_dssp CHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHcCCC
Confidence 99999999988864
No 111
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.78 E-value=5.2e-19 Score=143.64 Aligned_cols=109 Identities=36% Similarity=0.451 Sum_probs=85.8
Q ss_pred cCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHH
Q psy903 151 ETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYA 230 (739)
Q Consensus 151 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A 230 (739)
.+|..|.||||+|+..|+.+++++|++.|++++..+.. |.||||+|+..++.+++++|+++|++++.+|..|.||||+|
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~-g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A 82 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKD-GNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLA 82 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSS-SCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCC-CCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHH
Confidence 45777888888888888888888888888877766543 45888888888888888888888888888888888888888
Q ss_pred HhcCcHHHHHHHHHCCCCCCCCCCCCCcHH
Q psy903 231 CAGGHEAVVRVLLECGANVEDHNENGHTPL 260 (739)
Q Consensus 231 ~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L 260 (739)
+..++.+++++|+++|++++..+..|.+|-
T Consensus 83 ~~~~~~~~~~~Ll~~ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 83 KKNGHHEIVKLLDAKGADVNARSWGSSHHH 112 (115)
T ss_dssp HTTTCHHHHHHHHTTSSSHHHHSCCCC---
T ss_pred HHCCCHHHHHHHHHcCCCCCcCCccccccc
Confidence 888888888888888888888877777763
No 112
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.74 E-value=2.9e-18 Score=139.25 Aligned_cols=100 Identities=42% Similarity=0.618 Sum_probs=83.5
Q ss_pred CCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcC
Q psy903 188 KGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAG 267 (739)
Q Consensus 188 ~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~ 267 (739)
..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..++.+++++|+++|++++.+|..|.|||++|+..+
T Consensus 7 ~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~~~~ 86 (115)
T 2l6b_A 7 KDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAKKNG 86 (115)
T ss_dssp CSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHHTTT
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCC
Confidence 44568888888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred ChHHHHHHHHcCCCCcccCc
Q psy903 268 HVGVAKILLEYGAGINTHSN 287 (739)
Q Consensus 268 ~~~ii~~Ll~~~~~~~~~~~ 287 (739)
+.+++++|+++|++++....
T Consensus 87 ~~~~~~~Ll~~ga~~n~~~~ 106 (115)
T 2l6b_A 87 HHEIVKLLDAKGADVNARSW 106 (115)
T ss_dssp CHHHHHHHHTTSSSHHHHSC
T ss_pred CHHHHHHHHHcCCCCCcCCc
Confidence 88888888888887776533
No 113
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.68 E-value=1.4e-16 Score=127.49 Aligned_cols=86 Identities=38% Similarity=0.575 Sum_probs=58.7
Q ss_pred CCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCCh
Q psy903 190 ECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHV 269 (739)
Q Consensus 190 ~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~ 269 (739)
|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.
T Consensus 24 g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~ 103 (110)
T 2zgd_A 24 LGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISIDNGNE 103 (110)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCH
T ss_pred cchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHHHHHcCCH
Confidence 34666666666666666666666666666666666777777766666777777666666666666666677766666666
Q ss_pred HHHHHH
Q psy903 270 GVAKIL 275 (739)
Q Consensus 270 ~ii~~L 275 (739)
+++++|
T Consensus 104 ~~~~~L 109 (110)
T 2zgd_A 104 DLAEIL 109 (110)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 666655
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.64 E-value=6.2e-16 Score=123.67 Aligned_cols=92 Identities=30% Similarity=0.416 Sum_probs=75.1
Q ss_pred CcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHH
Q psy903 150 HETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMY 229 (739)
Q Consensus 150 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~ 229 (739)
...+.+|.|+||+|+..|+.+++++|++.|++++..+. .|.||||+|+..|+.+++++|+++|++++.+|..|.||||+
T Consensus 18 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~-~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~ 96 (110)
T 2zgd_A 18 SHMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDK-NGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDI 96 (110)
T ss_dssp ----CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCT-TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred cccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHH
Confidence 34567788888888888888888888888888877664 45688888888888888888888888888888888999999
Q ss_pred HHhcCcHHHHHHH
Q psy903 230 ACAGGHEAVVRVL 242 (739)
Q Consensus 230 A~~~~~~~~v~~L 242 (739)
|+..|+.+++++|
T Consensus 97 A~~~~~~~~~~~L 109 (110)
T 2zgd_A 97 SIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHTCHHHHHHH
T ss_pred HHHcCCHHHHHHh
Confidence 9998888888876
No 115
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=55.00 E-value=19 Score=36.63 Aligned_cols=26 Identities=19% Similarity=0.216 Sum_probs=14.5
Q ss_pred HHHHHHcCCHH----HHHHHHhcCCCCCcC
Q psy903 127 LVQACSDGDVK----TVKKLLTEGRSVHET 152 (739)
Q Consensus 127 l~~A~~~~~~~----~~~~ll~~~~~~~~~ 152 (739)
|...++.|+.+ +++.+.+.|..++..
T Consensus 33 id~c~k~G~~~~A~~lf~~M~~~Gv~pd~~ 62 (501)
T 4g26_A 33 LDMCSKKGDVLEALRLYDEARRNGVQLSQY 62 (501)
T ss_dssp HHHTTTSCCHHHHHHHHHHHHHHTCCCCHH
T ss_pred HHHHHhCCCHHHHHHHHHHHHHcCCCCCHh
Confidence 45556677765 444444567665443
No 116
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=45.40 E-value=36 Score=32.43 Aligned_cols=52 Identities=19% Similarity=0.313 Sum_probs=42.6
Q ss_pred hhhhhcCCHHHHHHHHHcCCCCcc--------------cCCCCCcHHHHHHhcCcHHHHHHHHHcc
Q psy903 3 VQACSDGDVKTVKKLLTEGRSVHE--------------TTDEGESLLSLACSAGYYELAQVLLAMH 54 (739)
Q Consensus 3 ~~A~~~g~~~~v~~ll~~g~~~~~--------------~~~~g~t~L~~A~~~~~~~iv~~Ll~~g 54 (739)
+..|..||...|+..+..|-+++. .-.-|.|.+|+|+++.+-+++..|+..+
T Consensus 27 c~gv~e~~~~~ve~y~~~gg~~~r~lt~~e~~lln~~~af~~g~tlvhlair~~r~~~l~~ll~~~ 92 (454)
T 3zrh_A 27 CVGVVEGDLAAIEAYKSSGGDIARQLTADEVRLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLTEV 92 (454)
T ss_dssp HHHHHHTCHHHHHHHHTTTCCTTCCCCHHHHHHHCCTTTCCTTCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred hHHHHcCChhHHHHHHhcCCchhcccCHHHHHHhCCCcccccCchhhhhhhhhhhhhHHHHhhhcc
Confidence 456889999999999998776532 2245999999999999999999999733
No 117
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=39.16 E-value=1e+02 Score=25.76 Aligned_cols=130 Identities=14% Similarity=0.093 Sum_probs=78.0
Q ss_pred chHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcH
Q psy903 124 ERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFI 203 (739)
Q Consensus 124 ~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~ 203 (739)
.+-+..|+..|++++...+.+..-+ .......=..|...|++++++.-.++-.+.. ..+.+....|+.
T Consensus 9 ~~rF~LAL~lg~l~~A~e~a~~l~~----~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D~~--------~L~~Ly~~tg~~ 76 (177)
T 3mkq_B 9 HIRFDLALEYGNLDAALDEAKKLND----SITWERLIQEALAQGNASLAEMIYQTQHSFD--------KLSFLYLVTGDV 76 (177)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHCC----HHHHHHHHHHHHHTTCHHHHHHHHHHTTCHH--------HHHHHHHHHTCH
T ss_pred HHHHHHHHhcCCHHHHHHHHHHhCC----HHHHHHHHHHHHHcCChHHHHHHHHHhCCHH--------HHHHHHHHhCCH
Confidence 4568888899998887666653100 1122344556778888888888877654442 445555666776
Q ss_pred HHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcH-HHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHH
Q psy903 204 EIVRLLINHGADVNGQSSSGNTPLMYACAGGHE-AVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLE 277 (739)
Q Consensus 204 ~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~-~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~ 277 (739)
+-++.|.+- -....+.+.+++.+...|+. +++++|.+.|--+ -+...|-.+|..++.+-+++
T Consensus 77 e~L~kla~i----A~~~g~~n~af~~~l~lGdv~~~i~lL~~~~r~~--------eA~~~A~t~g~~~~a~~~~~ 139 (177)
T 3mkq_B 77 NKLSKMQNI----AQTREDFGSMLLNTFYNNSTKERSSIFAEGGSLP--------LAYAVAKANGDEAAASAFLE 139 (177)
T ss_dssp HHHHHHHHH----HHHTTCHHHHHHHHHHHTCHHHHHHHHHHTTCHH--------HHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHH----HHHCccHHHHHHHHHHcCCHHHHHHHHHHCCChH--------HHHHHHHHcCcHHHHHHHHH
Confidence 666665431 00122235667777666765 5777776643211 14555666777777777765
No 118
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=36.87 E-value=87 Score=31.74 Aligned_cols=14 Identities=7% Similarity=0.200 Sum_probs=6.5
Q ss_pred HHHHHHHhcCCCCC
Q psy903 137 KTVKKLLTEGRSVH 150 (739)
Q Consensus 137 ~~~~~ll~~~~~~~ 150 (739)
++++.+.+.|..+|
T Consensus 91 ~lf~~M~~~G~~Pd 104 (501)
T 4g26_A 91 DIFKQMIVDKVVPN 104 (501)
T ss_dssp HHHHHHHHTTCCCC
T ss_pred HHHHHHHHhCCCCC
Confidence 34444445554443
No 119
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=35.85 E-value=26 Score=20.08 Aligned_cols=16 Identities=50% Similarity=0.576 Sum_probs=9.9
Q ss_pred hhhhhcCCHHHHHHHH
Q psy903 3 VQACSDGDVKTVKKLL 18 (739)
Q Consensus 3 ~~A~~~g~~~~v~~ll 18 (739)
+.|+..||.+.|+.|-
T Consensus 18 yvA~seGd~etv~~Le 33 (40)
T 1gp8_A 18 DAAASKGDVETYRKLK 33 (40)
T ss_dssp HHHHTTSCHHHHHHHH
T ss_pred HHHHhcCCHHHHHHHH
Confidence 4566666666666653
Done!