Query psy9036
Match_columns 143
No_of_seqs 118 out of 387
Neff 4.0
Searched_HMMs 29240
Date Fri Aug 16 17:21:23 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9036.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9036hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3gia_A Uncharacterized protein 96.4 0.0017 5.8E-08 53.2 3.0 78 29-109 4-81 (444)
2 3l1l_A Arginine/agmatine antip 95.8 0.0033 1.1E-07 51.3 1.9 77 29-109 6-82 (445)
3 4djk_A Probable glutamate/gamm 90.9 0.038 1.3E-06 45.9 -0.3 73 28-108 8-83 (511)
4 2qn4_A RASI, alpha-amylase/sub 59.9 2.4 8.2E-05 33.4 0.6 21 91-111 30-51 (200)
5 3s8k_A Latex serine proteinase 36.3 9.3 0.00032 29.6 0.5 25 91-115 9-34 (184)
6 3tc2_A Kunitz-type proteinase 35.3 10 0.00035 29.3 0.6 21 91-111 11-32 (187)
7 3bx1_D BASI, alpha-amylase/sub 32.8 14 0.00049 28.3 1.1 21 91-111 9-30 (181)
8 1tie_A Erythrina trypsin inhib 31.8 15 0.00051 28.0 1.0 21 91-111 5-26 (172)
9 1eyl_A RWCI-3, chymotrypsin in 31.0 15 0.00051 28.5 0.9 21 91-111 10-31 (186)
10 3iir_A Trypsin inhibitor; beta 30.1 9.7 0.00033 29.6 -0.3 22 91-112 6-28 (190)
11 1r8o_A STI, kunitz trypsin inh 30.0 13 0.00043 26.1 0.3 21 91-111 5-27 (96)
12 1r8n_A STI, kunitz trypsin inh 27.0 17 0.00058 28.1 0.6 21 91-111 9-30 (185)
13 2dre_A Water-soluble chlorophy 26.9 15 0.00051 28.3 0.3 21 91-111 10-31 (180)
14 4an6_A Trypsin inhibitor; kuni 22.9 18 0.00061 27.7 0.0 20 91-110 7-28 (185)
15 1wba_A Winged bean albumin 1; 22.7 23 0.00079 27.2 0.6 19 91-111 8-27 (175)
No 1
>3gia_A Uncharacterized protein MJ0609; membrane protein, transporter, cell membrane, membrane, transmembrane, transport protein; HET: D10 BCN; 2.32A {Methanocaldococcus jannaschii} PDB: 3gi9_C* 3gi8_C
Probab=96.40 E-value=0.0017 Score=53.15 Aligned_cols=78 Identities=13% Similarity=0.073 Sum_probs=65.1
Q ss_pred CcceeeeEEeeehhhhHHHHHHHHHHHHHHHhhhccchhhHHHHHHHHHHHHHHHHHHHHhHhcCcccCCccceechhhh
Q psy9036 29 HGVKLGWIVGVLIPCLLNIWGVMLFLRMAWVVGEAGIGHSLVIIGISYVVCIITTLSLSAITTNGEVKGGECMSYSQKSQ 108 (143)
Q Consensus 29 ~~~k~Gtf~GVfiP~~lnI~GVilFLRlgwiVG~aGl~~~l~ii~ls~~it~lT~lSlsAIaTNg~v~~GG~Yyli~~sw 108 (143)
+++|+|+++.+++ .+-+++|.-+|...+...+++|- .+.+..+++.++.++++++.+.+++.-. ++||.|...++..
T Consensus 4 ~~r~l~~~~~~~l-~~g~~iG~gi~~~~~~~~~~~G~-~~~~~~li~~~~~~~~~~~~~el~~~~P-~~Gg~y~~~~~~~ 80 (444)
T 3gia_A 4 KNKKLSLWEAVSM-AVGVMIGASIFSIFGVGAKIAGR-NLPETFILSGIYALLVAYSYTKLGAKIV-SNAGPIAFIHKAI 80 (444)
T ss_dssp CCCCBCHHHHHHH-HHHHHHHHHTTTSHHHHHHHHGG-GHHHHHHHHHHHHHHHHHHHHHHHTTCC-CTTTHHHHHHHHH
T ss_pred cCCcCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHhhCC-CCCcHHHhHHHHh
Confidence 4568999888877 45567898899999999999997 6777888888999999999999999844 4799999988765
Q ss_pred h
Q psy9036 109 I 109 (143)
Q Consensus 109 i 109 (143)
+
T Consensus 81 G 81 (444)
T 3gia_A 81 G 81 (444)
T ss_dssp C
T ss_pred C
Confidence 3
No 2
>3l1l_A Arginine/agmatine antiporter; TCDB 2.A.3.2.5, ADIC, Arg-bound, amino-acid transport, cell inner membrane, cell membrane, membrane; HET: ARG BNG; 3.00A {Escherichia coli} PDB: 3h5m_A* 3h6b_A 3lrb_A 3lrc_A 3ob6_A* 3hqk_A 3ncy_A
Probab=95.77 E-value=0.0033 Score=51.26 Aligned_cols=77 Identities=16% Similarity=0.135 Sum_probs=60.9
Q ss_pred CcceeeeEEeeehhhhHHHHHHHHHHHHHHHhhhccchhhHHHHHHHHHHHHHHHHHHHHhHhcCcccCCccceechhhh
Q psy9036 29 HGVKLGWIVGVLIPCLLNIWGVMLFLRMAWVVGEAGIGHSLVIIGISYVVCIITTLSLSAITTNGEVKGGECMSYSQKSQ 108 (143)
Q Consensus 29 ~~~k~Gtf~GVfiP~~lnI~GVilFLRlgwiVG~aGl~~~l~ii~ls~~it~lT~lSlsAIaTNg~v~~GG~Yyli~~sw 108 (143)
+++|+|+++.+++ .+-+++|.-+|.--+. +.++|- .++...+++.++.++++++...+++.-. +.||.|...++.+
T Consensus 6 ~~r~l~~~~~~~l-~ig~~iG~Gif~~~~~-~~~~G~-~~~~~~li~~~~~~~~a~~~~el~~~~p-~~Gg~y~~~~~~~ 81 (445)
T 3l1l_A 6 DAHKVGLIPVTLM-VSGAIMGSGVFLLPAN-LASTGG-IAIYGWLVTIIGALGLSMVYAKMSFLDP-SPGGSYAYARRCF 81 (445)
T ss_dssp -CCCBCHHHHHHH-HHHHHCSSHHHHHHHH-HHHHCT-HHHHHHHHHHHHHHHHHHHHHHHHHHCC-CTTTHHHHHHHHS
T ss_pred CCCcccHHHHHHH-HHHhHHhhhHHhhHHH-HHHhhh-HHHHHHHHHHHHHHHHHHHHHHHHccCC-CCCCchhhHHhHc
Confidence 4568999999988 6777888767776555 667886 4777788888999999999999999844 4789999988765
Q ss_pred h
Q psy9036 109 I 109 (143)
Q Consensus 109 i 109 (143)
+
T Consensus 82 G 82 (445)
T 3l1l_A 82 G 82 (445)
T ss_dssp C
T ss_pred C
Confidence 3
No 3
>4djk_A Probable glutamate/gamma-aminobutyrate antiporter; LEUT, glutamate-GABA antiporter, transport protein; 3.10A {Escherichia coli} PDB: 4dji_A
Probab=90.95 E-value=0.038 Score=45.92 Aligned_cols=73 Identities=12% Similarity=0.159 Sum_probs=39.0
Q ss_pred CCcceeeeEEeeehhhhHHHHHHHHHHHHHHHhhhccchhhHHHHHHHHHH-HHHHHHHHHHhHh--cCcccCCccceec
Q psy9036 28 THGVKLGWIVGVLIPCLLNIWGVMLFLRMAWVVGEAGIGHSLVIIGISYVV-CIITTLSLSAITT--NGEVKGGECMSYS 104 (143)
Q Consensus 28 ~~~~k~Gtf~GVfiP~~lnI~GVilFLRlgwiVG~aGl~~~l~ii~ls~~i-t~lT~lSlsAIaT--Ng~v~~GG~Yyli 104 (143)
+.++|+|+++.+.+-.- +++|+.... ..+++|....+ ..+++..+ .+.+++|++.+++ .-. +||.|+..
T Consensus 8 ~~~r~l~~~~~~~l~~~-~~ig~~~~~----~~~~~G~~~~~-~~~i~~~~~~l~~al~~ael~s~~~~P--~GG~y~~~ 79 (511)
T 4djk_A 8 GKAKQLTLLGFFAITAS-MVMAVYEYP----TFATSGFSLVF-FLLLGGILWFIPVGLCAAEMATVDGWE--EGGVFAWV 79 (511)
T ss_dssp ----CCCHHHHHHHTGG-GGCCGGGHH----HHHTTTTHHHH-HHHHHHHHTHHHHHHHHHHHHTTSCC-----CHHHHH
T ss_pred ccCccccHHHHHHHHHH-HHHhhchhH----HHHhhHHHHHH-HHHHHHHHHHHHHHHHHHHHcccccCC--CCChhhhH
Confidence 34568998887766332 233421111 13456643322 33333333 3459999999999 544 99999998
Q ss_pred hhhh
Q psy9036 105 QKSQ 108 (143)
Q Consensus 105 ~~sw 108 (143)
++..
T Consensus 80 ~~~~ 83 (511)
T 4djk_A 80 SNTL 83 (511)
T ss_dssp HHHH
T ss_pred Hhhc
Confidence 8854
No 4
>2qn4_A RASI, alpha-amylase/subtilisin inhibitor; amylase inhibitor, alpha- amylase inhibitor, protease inhibitor, serine protease inhibitor; 1.80A {Oryza sativa subsp}
Probab=59.94 E-value=2.4 Score=33.38 Aligned_cols=21 Identities=19% Similarity=0.007 Sum_probs=17.3
Q ss_pred hcC-cccCCccceechhhhhhh
Q psy9036 91 TNG-EVKGGECMSYSQKSQIYI 111 (143)
Q Consensus 91 TNg-~v~~GG~Yyli~~swi~g 111 (143)
||| +++.|+.||++.-.|..|
T Consensus 30 ~~G~~l~~G~~YyI~p~~~g~G 51 (200)
T 2qn4_A 30 TEGHELSADGSYYVLPASPGHG 51 (200)
T ss_dssp TTSCBCBTTSCEEEEESSTTSC
T ss_pred CCCCCCcCCCcEEEEeCccCCC
Confidence 665 788899999998888764
No 5
>3s8k_A Latex serine proteinase inhibitor; kunitz-STI fold, protease inhibitor, hydrolase inhibitor; HET: NAG FUC; 1.70A {Carica papaya} PDB: 3s8j_A*
Probab=36.30 E-value=9.3 Score=29.61 Aligned_cols=25 Identities=16% Similarity=-0.164 Sum_probs=19.5
Q ss_pred hcC-cccCCccceechhhhhhhhhhh
Q psy9036 91 TNG-EVKGGECMSYSQKSQIYINRGD 115 (143)
Q Consensus 91 TNg-~v~~GG~Yyli~~swi~g~~gi 115 (143)
||| +++.|+.||++...|..+.-|+
T Consensus 9 ~~G~~l~~g~~YyI~p~~~g~gGGGl 34 (184)
T 3s8k_A 9 IDGKPVLYGVDYFVVSAIWGAGGGGL 34 (184)
T ss_dssp TTSCBCBTTSCEEEEESSCGGGCCEE
T ss_pred CCCCCCcCCCcEEEEEcccCCCCCeE
Confidence 454 7899999999999998764343
No 6
>3tc2_A Kunitz-type proteinase inhibitor P1H5; beta-trefoil fold, protease inhibitor, hydrolase inhibitor; 1.60A {Solanum tuberosum}
Probab=35.35 E-value=10 Score=29.30 Aligned_cols=21 Identities=10% Similarity=-0.066 Sum_probs=17.2
Q ss_pred hcC-cccCCccceechhhhhhh
Q psy9036 91 TNG-EVKGGECMSYSQKSQIYI 111 (143)
Q Consensus 91 TNg-~v~~GG~Yyli~~swi~g 111 (143)
||| +++.|+.||++.-.|..+
T Consensus 11 ~~G~~l~~g~~YyI~p~~~g~g 32 (187)
T 3tc2_A 11 VTGKELDPRLSYRIISTFWGAL 32 (187)
T ss_dssp TTSCBCCTTSCEEEECSCCGGG
T ss_pred CCCCCCcCCCCEEEEEcccCCC
Confidence 454 788999999999988764
No 7
>3bx1_D BASI, alpha-amylase/subtilisin inhibitor; complex (proteinase/inhibitor) enzyme inhibition, savinase, barley alpha-amylase/subtilisin inhibitor; 1.85A {Hordeum vulgare} SCOP: b.42.4.1 PDB: 1ava_C 2iwt_B*
Probab=32.81 E-value=14 Score=28.35 Aligned_cols=21 Identities=14% Similarity=0.123 Sum_probs=17.3
Q ss_pred hcC-cccCCccceechhhhhhh
Q psy9036 91 TNG-EVKGGECMSYSQKSQIYI 111 (143)
Q Consensus 91 TNg-~v~~GG~Yyli~~swi~g 111 (143)
||| +++.|+.||++.-.|..|
T Consensus 9 ~~G~~l~~G~~YyI~p~~~g~G 30 (181)
T 3bx1_D 9 TDGHELRADANYYVLSANRAHG 30 (181)
T ss_dssp TTSCBCBTTSCEEEEESSGGGC
T ss_pred CCCCCCcCCCCEEEEecccCCC
Confidence 454 789999999999888864
No 8
>1tie_A Erythrina trypsin inhibitor; proteinase inhibitor (trypsin); 2.50A {Erythrina caffra} SCOP: b.42.4.1
Probab=31.75 E-value=15 Score=28.03 Aligned_cols=21 Identities=19% Similarity=0.072 Sum_probs=17.1
Q ss_pred hcC-cccCCccceechhhhhhh
Q psy9036 91 TNG-EVKGGECMSYSQKSQIYI 111 (143)
Q Consensus 91 TNg-~v~~GG~Yyli~~swi~g 111 (143)
||| +++.|+.||++.-.|..|
T Consensus 5 ~~G~~l~~G~~YyI~p~~~g~G 26 (172)
T 1tie_A 5 GNGEVVQNGGTYYLLPQVWAQG 26 (172)
T ss_dssp TTSCBCCTTCEEEEEESSGGGC
T ss_pred CCCCCCcCCCCEEEeECccCCC
Confidence 454 789999999999888864
No 9
>1eyl_A RWCI-3, chymotrypsin inhibitor; beta trefoil, hydrolase inhibitor; HET: SO4; 1.90A {Psophocarpus tetragonolobus} SCOP: b.42.4.1 PDB: 1fn0_A* 2beb_A 2esu_A 1fmz_A* 2bea_A 2et2_A 4wbc_A* 1wbc_A 2wbc_A* 1xg6_A 2qyi_B 3i29_B 3i2x_A 3i2a_A 3qyd_A
Probab=30.97 E-value=15 Score=28.47 Aligned_cols=21 Identities=14% Similarity=-0.001 Sum_probs=17.2
Q ss_pred hcC-cccCCccceechhhhhhh
Q psy9036 91 TNG-EVKGGECMSYSQKSQIYI 111 (143)
Q Consensus 91 TNg-~v~~GG~Yyli~~swi~g 111 (143)
||| +++.|+.||++.-.|..|
T Consensus 10 ~~G~~l~~G~~YYI~p~~~g~G 31 (186)
T 1eyl_A 10 AEGNLVENGGTYYLLPHIWAHG 31 (186)
T ss_dssp TTSSBCBTTCEEEEEESSGGGC
T ss_pred CCCCCCcCCCCEEEeecccCCC
Confidence 454 789999999999888764
No 10
>3iir_A Trypsin inhibitor; beta-trefoil fold, hydrolase inhib; 2.90A {Murraya koenigii} SCOP: b.42.4.0
Probab=30.12 E-value=9.7 Score=29.59 Aligned_cols=22 Identities=14% Similarity=-0.112 Sum_probs=17.8
Q ss_pred hcC-cccCCccceechhhhhhhh
Q psy9036 91 TNG-EVKGGECMSYSQKSQIYIN 112 (143)
Q Consensus 91 TNg-~v~~GG~Yyli~~swi~g~ 112 (143)
||| +++.|+.||++...|..|.
T Consensus 6 ~~G~~l~~g~~YyI~p~~~g~gG 28 (190)
T 3iir_A 6 INGNVVEASRDYYLVSVIGGAGG 28 (190)
T ss_dssp TTSCBCBTTSCBEEEEEEEETTE
T ss_pred CCCCCCcCCCCEEEEECccCCCC
Confidence 454 7889999999999887653
No 11
>1r8o_A STI, kunitz trypsin inhibitor; kunitz (STI) trypsin inhibitor, beta-trefoil fold, hydrolase inhibitor; 1.83A {Copaifera langsdorffii} SCOP: b.42.4.1
Probab=30.04 E-value=13 Score=26.08 Aligned_cols=21 Identities=14% Similarity=0.047 Sum_probs=16.4
Q ss_pred hcC-cc-cCCccceechhhhhhh
Q psy9036 91 TNG-EV-KGGECMSYSQKSQIYI 111 (143)
Q Consensus 91 TNg-~v-~~GG~Yyli~~swi~g 111 (143)
+|| ++ +.|+.||++...|..|
T Consensus 5 ~~G~~l~~~G~~YyI~p~~~g~G 27 (96)
T 1r8o_A 5 TDGKPIENDGAEYYILPSVRGKG 27 (96)
T ss_dssp TTSCCCBSSSSCEEEEESSSSSC
T ss_pred cCCCEeeeCCCcEEEeeCccCCC
Confidence 454 67 8999999998878654
No 12
>1r8n_A STI, kunitz trypsin inhibitor; kunitz-type trypsin/kallikrein inhibitor, beta-trefoil fold, flamboyant, hydrolase inhibitor; 1.75A {Delonix regia} SCOP: b.42.4.1
Probab=26.95 E-value=17 Score=28.14 Aligned_cols=21 Identities=14% Similarity=-0.203 Sum_probs=17.5
Q ss_pred hcC-cccCCccceechhhhhhh
Q psy9036 91 TNG-EVKGGECMSYSQKSQIYI 111 (143)
Q Consensus 91 TNg-~v~~GG~Yyli~~swi~g 111 (143)
||| +++.|+.||++.-.|..|
T Consensus 9 ~~G~~l~~G~~YyI~p~~~g~g 30 (185)
T 1r8n_A 9 IEGYPVFLGSEYYIVSAIIGAG 30 (185)
T ss_dssp TTSCBCBTTSEEEEEECTTSSS
T ss_pred CCCCCCcCCCCEEEEECccCCC
Confidence 454 789999999999888865
No 13
>2dre_A Water-soluble chlorophyll protein; beta-trefoil, tetramer, plant, singlet oxygen, photooxidation, chlorophyll carrier; HET: CLA; 2.00A {Lepidium virginicum}
Probab=26.89 E-value=15 Score=28.34 Aligned_cols=21 Identities=24% Similarity=0.004 Sum_probs=17.2
Q ss_pred hcC-cccCCccceechhhhhhh
Q psy9036 91 TNG-EVKGGECMSYSQKSQIYI 111 (143)
Q Consensus 91 TNg-~v~~GG~Yyli~~swi~g 111 (143)
||| +++.|+.||++.-.|..|
T Consensus 10 ~~G~~l~~G~~YyI~p~~~g~g 31 (180)
T 2dre_A 10 TNGNPLKIETRYFIQPASDNNG 31 (180)
T ss_dssp TTSCBCBTTCCEEEEESSCSSS
T ss_pred CCCCCCcCCCCEEEEeCccCCC
Confidence 454 789999999999888765
No 14
>4an6_A Trypsin inhibitor; kunitz type inhibitor, factor XA inhibitor, hydrolase inhibi; 1.94A {Tamarindus indica} PDB: 4an7_B
Probab=22.91 E-value=18 Score=27.75 Aligned_cols=20 Identities=15% Similarity=0.061 Sum_probs=16.0
Q ss_pred hcCc--ccCCccceechhhhhh
Q psy9036 91 TNGE--VKGGECMSYSQKSQIY 110 (143)
Q Consensus 91 TNg~--v~~GG~Yyli~~swi~ 110 (143)
|||+ ++.||.||++.-.|..
T Consensus 7 t~G~pvl~~g~~YYIlP~~~g~ 28 (185)
T 4an6_A 7 TDGKPVLNNAGQYYILPAKQGK 28 (185)
T ss_dssp TTSCBCBSSSSEEEEEESSCCS
T ss_pred CCCCEeecCCCCEEEEECccCC
Confidence 6886 3799999999877764
No 15
>1wba_A Winged bean albumin 1; SEED storage protein; 1.80A {Psophocarpus tetragonolobus} SCOP: b.42.4.1
Probab=22.67 E-value=23 Score=27.18 Aligned_cols=19 Identities=5% Similarity=-0.115 Sum_probs=14.9
Q ss_pred hcC-cccCCccceechhhhhhh
Q psy9036 91 TNG-EVKGGECMSYSQKSQIYI 111 (143)
Q Consensus 91 TNg-~v~~GG~Yyli~~swi~g 111 (143)
||| +++.|+.||++. |..+
T Consensus 8 ~~G~~l~~g~~YyI~p--~g~g 27 (175)
T 1wba_A 8 AEGNKLVNRGKYTIVS--FSDG 27 (175)
T ss_dssp TTSCBCBTTEEEEEEE--TTTC
T ss_pred CCCCCCcCCCcEEEee--cCCC
Confidence 454 789999999988 6654
Done!