Query psy9039
Match_columns 251
No_of_seqs 184 out of 1161
Neff 7.0
Searched_HMMs 29240
Date Fri Aug 16 17:24:26 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9039.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9039hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3tha_A Tryptophan synthase alp 100.0 4.8E-39 1.6E-43 282.8 3.8 198 13-245 15-232 (252)
2 3nav_A Tryptophan synthase alp 100.0 7E-38 2.4E-42 278.5 5.5 197 13-245 21-242 (271)
3 3vnd_A TSA, tryptophan synthas 100.0 1.7E-36 5.7E-41 269.2 7.3 197 13-245 19-240 (267)
4 1ujp_A Tryptophan synthase alp 100.0 2.3E-34 7.9E-39 256.1 5.6 196 13-246 17-235 (271)
5 2ekc_A AQ_1548, tryptophan syn 100.0 1.1E-32 3.8E-37 244.1 6.1 198 13-246 18-240 (262)
6 1qop_A Tryptophan synthase alp 100.0 4.6E-30 1.6E-34 227.8 6.6 198 13-246 18-240 (268)
7 1rd5_A Tryptophan synthase alp 99.9 3.1E-25 1E-29 195.5 6.7 192 13-246 19-236 (262)
8 1geq_A Tryptophan synthase alp 99.8 8.8E-22 3E-26 171.4 5.5 196 13-246 6-226 (248)
9 2f6u_A GGGPS, (S)-3-O-geranylg 99.8 6.2E-19 2.1E-23 153.3 9.1 180 14-246 8-224 (234)
10 1viz_A PCRB protein homolog; s 99.8 2E-18 6.7E-23 150.8 10.7 182 13-247 7-217 (240)
11 3w01_A Heptaprenylglyceryl pho 99.6 4.8E-15 1.6E-19 128.6 11.2 179 16-246 13-220 (235)
12 3vzx_A Heptaprenylglyceryl pho 99.6 5.6E-15 1.9E-19 127.8 9.5 182 16-246 8-214 (228)
13 1tqj_A Ribulose-phosphate 3-ep 99.4 3.3E-14 1.1E-18 123.1 3.8 190 12-246 5-207 (230)
14 1rpx_A Protein (ribulose-phosp 99.4 1.5E-13 5.2E-18 118.1 4.9 191 11-246 10-213 (230)
15 1h1y_A D-ribulose-5-phosphate 99.4 1.5E-12 5.2E-17 112.1 9.7 189 14-246 9-207 (228)
16 1h5y_A HISF; histidine biosynt 99.3 1.5E-12 5E-17 112.0 7.8 181 43-247 40-234 (253)
17 1ka9_F Imidazole glycerol phos 99.3 1.7E-12 6E-17 112.5 6.0 181 43-247 38-232 (252)
18 3f4w_A Putative hexulose 6 pho 99.3 2.4E-12 8.1E-17 108.9 6.4 177 25-247 10-194 (211)
19 3q58_A N-acetylmannosamine-6-p 99.3 1.8E-11 6E-16 106.0 10.5 172 19-245 25-215 (229)
20 3igs_A N-acetylmannosamine-6-p 99.3 1.8E-11 6.3E-16 106.1 10.6 172 19-245 25-215 (232)
21 1xm3_A Thiazole biosynthesis p 99.3 4.5E-12 1.5E-16 111.8 6.4 66 179-245 140-212 (264)
22 2tps_A Protein (thiamin phosph 99.2 3.8E-11 1.3E-15 102.3 9.7 159 43-246 38-206 (227)
23 1thf_D HISF protein; thermophI 99.2 2.2E-11 7.5E-16 105.6 8.1 181 43-247 37-231 (253)
24 2w6r_A Imidazole glycerol phos 99.2 3.7E-11 1.3E-15 104.9 9.6 182 43-247 37-236 (266)
25 3qja_A IGPS, indole-3-glycerol 99.2 3.7E-11 1.3E-15 106.6 7.3 165 43-247 79-249 (272)
26 2z6i_A Trans-2-enoyl-ACP reduc 99.1 1.1E-10 3.7E-15 105.9 9.8 141 77-248 50-199 (332)
27 2gjl_A Hypothetical protein PA 99.1 2.3E-10 8E-15 103.4 12.0 140 76-246 53-207 (328)
28 3tdn_A FLR symmetric alpha-bet 99.1 2.7E-11 9.4E-16 105.1 4.5 183 43-249 42-238 (247)
29 2fli_A Ribulose-phosphate 3-ep 99.1 6.4E-11 2.2E-15 100.5 4.9 188 12-246 4-204 (220)
30 3bw2_A 2-nitropropane dioxygen 99.0 6.2E-10 2.1E-14 102.2 9.9 71 178-248 157-245 (369)
31 1qo2_A Molecule: N-((5-phospho 99.0 1.6E-10 5.5E-15 99.7 5.3 177 43-246 37-229 (241)
32 3bo9_A Putative nitroalkan dio 99.0 1.3E-09 4.6E-14 98.6 11.3 140 76-246 63-211 (326)
33 1vzw_A Phosphoribosyl isomeras 99.0 5.6E-10 1.9E-14 96.3 6.7 177 43-246 39-228 (244)
34 1xi3_A Thiamine phosphate pyro 99.0 5.8E-09 2E-13 87.7 11.7 67 180-246 122-196 (215)
35 3vk5_A MOEO5; TIM barrel, tran 98.9 7.3E-09 2.5E-13 91.7 12.3 69 177-247 190-263 (286)
36 3jr2_A Hexulose-6-phosphate sy 98.9 1E-09 3.5E-14 93.7 6.5 161 47-245 29-199 (218)
37 2yw3_A 4-hydroxy-2-oxoglutarat 98.9 3.1E-09 1.1E-13 90.4 9.1 151 43-248 32-186 (207)
38 3ajx_A 3-hexulose-6-phosphate 98.9 1.4E-09 4.8E-14 91.5 6.3 175 25-246 10-192 (207)
39 2v82_A 2-dehydro-3-deoxy-6-pho 98.9 3.3E-09 1.1E-13 89.6 8.6 151 43-246 26-182 (212)
40 2y88_A Phosphoribosyl isomeras 98.9 2.5E-09 8.6E-14 92.0 7.6 178 43-247 38-232 (244)
41 1yxy_A Putative N-acetylmannos 98.9 9.9E-09 3.4E-13 88.0 11.1 176 20-245 24-220 (234)
42 4e38_A Keto-hydroxyglutarate-a 98.9 4.4E-09 1.5E-13 91.1 8.3 156 43-249 53-216 (232)
43 1wa3_A 2-keto-3-deoxy-6-phosph 98.8 2.6E-09 8.7E-14 89.8 4.9 155 42-248 28-185 (205)
44 3o63_A Probable thiamine-phosp 98.8 7.9E-09 2.7E-13 90.1 8.1 68 179-246 148-225 (243)
45 3tsm_A IGPS, indole-3-glycerol 98.8 8.7E-09 3E-13 91.3 8.3 166 43-248 86-257 (272)
46 3zen_D Fatty acid synthase; tr 98.8 3.5E-09 1.2E-13 118.0 4.9 153 74-245 464-651 (3089)
47 3khj_A Inosine-5-monophosphate 98.8 2.7E-08 9.2E-13 91.4 9.8 143 78-246 83-242 (361)
48 1y0e_A Putative N-acetylmannos 98.7 1.9E-08 6.3E-13 85.5 7.9 173 20-245 13-209 (223)
49 1vhc_A Putative KHG/KDPG aldol 98.7 4.3E-08 1.5E-12 84.4 9.6 150 43-245 36-190 (224)
50 2nv1_A Pyridoxal biosynthesis 98.7 3.4E-08 1.2E-12 88.4 9.3 171 43-248 35-246 (305)
51 1mxs_A KDPG aldolase; 2-keto-3 98.7 1.4E-08 4.8E-13 87.5 6.3 150 43-245 45-199 (225)
52 1wbh_A KHG/KDPG aldolase; lyas 98.7 7.2E-08 2.5E-12 82.4 10.2 150 43-245 35-189 (214)
53 1ep3_A Dihydroorotate dehydrog 98.7 4.8E-08 1.7E-12 86.8 9.2 73 174-246 177-276 (311)
54 4adt_A Pyridoxine biosynthetic 98.7 4.2E-08 1.4E-12 87.9 8.2 171 43-248 35-246 (297)
55 3lab_A Putative KDPG (2-keto-3 98.7 2.8E-08 9.5E-13 85.1 6.5 155 43-245 32-192 (217)
56 3ovp_A Ribulose-phosphate 3-ep 98.7 3E-08 1E-12 85.6 6.7 169 43-245 24-202 (228)
57 2uva_G Fatty acid synthase bet 98.7 6.3E-08 2.2E-12 105.2 10.5 149 74-245 619-800 (2060)
58 2zbt_A Pyridoxal biosynthesis 98.7 9.4E-09 3.2E-13 91.5 3.3 172 43-247 35-245 (297)
59 2uv8_G Fatty acid synthase sub 98.6 4.7E-08 1.6E-12 105.8 9.1 149 74-245 626-807 (2051)
60 3inp_A D-ribulose-phosphate 3- 98.6 5.4E-08 1.8E-12 85.0 7.1 169 43-245 47-228 (246)
61 1yad_A Regulatory protein TENI 98.6 4.8E-08 1.6E-12 83.1 6.3 155 43-246 36-198 (221)
62 3ctl_A D-allulose-6-phosphate 98.6 3E-08 1E-12 85.8 5.0 169 43-246 20-202 (231)
63 1vc4_A Indole-3-glycerol phosp 98.6 8.2E-08 2.8E-12 84.1 7.2 165 43-248 72-244 (254)
64 1jvn_A Glutamine, bifunctional 98.6 6.5E-08 2.2E-12 93.5 6.4 192 43-246 287-532 (555)
65 1wv2_A Thiazole moeity, thiazo 98.5 1.5E-07 5E-12 82.4 7.9 116 114-246 101-222 (265)
66 3ceu_A Thiamine phosphate pyro 98.5 2.9E-07 1E-11 77.9 7.7 66 179-245 101-177 (210)
67 4fo4_A Inosine 5'-monophosphat 98.5 5.5E-07 1.9E-11 82.8 9.9 143 78-245 84-245 (366)
68 1jub_A Dihydroorotate dehydrog 98.4 6.3E-07 2.1E-11 80.0 9.0 72 174-245 173-276 (311)
69 3gr7_A NADPH dehydrogenase; fl 98.4 1.3E-06 4.6E-11 79.4 11.1 155 30-248 138-315 (340)
70 3cu2_A Ribulose-5-phosphate 3- 98.4 2.6E-07 9E-12 80.2 5.1 184 14-246 16-223 (237)
71 1z41_A YQJM, probable NADH-dep 98.4 3E-06 1E-10 76.8 12.2 154 30-247 138-314 (338)
72 1tqx_A D-ribulose-5-phosphate 98.4 9.6E-07 3.3E-11 76.1 8.2 168 43-245 25-206 (227)
73 3o07_A Pyridoxine biosynthesis 98.4 9.1E-08 3.1E-12 84.4 1.6 172 43-248 25-237 (291)
74 2e6f_A Dihydroorotate dehydrog 98.3 3.5E-07 1.2E-11 81.7 5.3 72 174-245 175-278 (314)
75 3zwt_A Dihydroorotate dehydrog 98.3 1.9E-06 6.4E-11 79.3 10.2 76 172-247 233-334 (367)
76 3hgj_A Chromate reductase; TIM 98.3 3.2E-06 1.1E-10 77.1 10.5 158 30-249 146-327 (349)
77 3i65_A Dihydroorotate dehydrog 98.3 1.9E-06 6.6E-11 80.3 9.0 77 172-248 282-382 (415)
78 4gj1_A 1-(5-phosphoribosyl)-5- 98.3 1E-06 3.4E-11 76.6 6.2 183 43-250 38-233 (243)
79 1nsj_A PRAI, phosphoribosyl an 98.2 5.5E-07 1.9E-11 76.5 3.2 164 43-248 16-189 (205)
80 1v5x_A PRA isomerase, phosphor 98.2 1E-06 3.5E-11 74.7 3.9 163 43-248 15-183 (203)
81 2htm_A Thiazole biosynthesis p 98.2 1.8E-06 6.1E-11 75.7 5.4 116 114-246 90-213 (268)
82 2h6r_A Triosephosphate isomera 98.1 1.3E-06 4.3E-11 74.8 3.9 60 187-247 140-206 (219)
83 1tv5_A Dhodehase, dihydroorota 98.1 8.7E-06 3E-10 76.6 9.9 74 174-247 312-409 (443)
84 3kru_A NADH:flavin oxidoreduct 98.1 7.7E-06 2.6E-10 74.5 8.0 157 30-249 137-316 (343)
85 1f76_A Dihydroorotate dehydrog 98.1 1.1E-05 3.7E-10 72.8 8.8 72 174-245 226-323 (336)
86 3l5l_A Xenobiotic reductase A; 98.0 8.1E-06 2.8E-10 74.8 7.6 158 30-248 152-333 (363)
87 3nl6_A Thiamine biosynthetic b 98.0 2.5E-05 8.5E-10 75.2 11.0 156 43-245 32-214 (540)
88 3ffs_A Inosine-5-monophosphate 98.0 8.1E-06 2.8E-10 75.9 7.0 71 174-245 193-280 (400)
89 3b0p_A TRNA-dihydrouridine syn 98.0 7.1E-06 2.4E-10 74.8 6.4 73 175-247 146-232 (350)
90 3l5a_A NADH/flavin oxidoreduct 98.0 2.1E-05 7.2E-10 73.5 9.6 70 179-248 270-354 (419)
91 3tdn_A FLR symmetric alpha-bet 98.0 6.2E-06 2.1E-10 71.1 5.6 75 173-247 35-115 (247)
92 1vyr_A Pentaerythritol tetrani 98.0 9.3E-05 3.2E-09 67.8 13.0 71 177-247 255-330 (364)
93 1i4n_A Indole-3-glycerol phosp 98.0 2.1E-05 7.1E-10 68.7 8.1 141 80-247 91-237 (251)
94 2r14_A Morphinone reductase; H 97.9 1.8E-05 6.2E-10 72.9 7.8 158 30-247 160-335 (377)
95 4ab4_A Xenobiotic reductase B; 97.9 1.6E-05 5.5E-10 72.9 7.4 69 176-248 245-316 (362)
96 3gka_A N-ethylmaleimide reduct 97.9 1.5E-05 5.1E-10 73.1 6.9 155 30-248 155-324 (361)
97 3sgz_A Hydroxyacid oxidase 2; 97.9 7.1E-05 2.4E-09 68.3 11.1 70 176-245 228-306 (352)
98 4ef8_A Dihydroorotate dehydrog 97.9 1.5E-05 5E-10 73.0 6.1 46 203-248 265-314 (354)
99 3iwp_A Copper homeostasis prot 97.9 4.4E-05 1.5E-09 67.7 8.5 161 43-233 53-228 (287)
100 1ps9_A 2,4-dienoyl-COA reducta 97.8 8.6E-05 3E-09 72.7 11.2 157 30-248 135-318 (671)
101 4a29_A Engineered retro-aldol 97.8 0.00015 5.2E-09 63.3 11.5 163 45-247 72-240 (258)
102 4aaj_A N-(5'-phosphoribosyl)an 97.8 4.8E-05 1.6E-09 65.5 8.0 132 94-248 72-210 (228)
103 2agk_A 1-(5-phosphoribosyl)-5- 97.8 1.3E-05 4.6E-10 70.2 4.4 177 43-248 45-245 (260)
104 2hsa_B 12-oxophytodienoate red 97.8 7.4E-05 2.5E-09 69.4 9.5 158 30-247 165-355 (402)
105 1gte_A Dihydropyrimidine dehyd 97.8 7.7E-05 2.6E-09 76.7 10.1 157 78-246 621-822 (1025)
106 2w6r_A Imidazole glycerol phos 97.8 5.1E-05 1.7E-09 65.7 7.2 71 174-244 31-107 (266)
107 3oix_A Putative dihydroorotate 97.8 0.00011 3.9E-09 66.9 9.8 44 203-246 262-310 (345)
108 1p0k_A Isopentenyl-diphosphate 97.7 2.7E-05 9.2E-10 70.6 5.6 71 176-246 192-286 (349)
109 1nvm_A HOA, 4-hydroxy-2-oxoval 97.7 1.5E-05 5E-10 72.5 3.7 157 43-219 37-199 (345)
110 1pii_A N-(5'phosphoribosyl)ant 97.7 4.2E-05 1.4E-09 72.1 6.7 165 43-248 75-244 (452)
111 1eep_A Inosine 5'-monophosphat 97.7 6.4E-05 2.2E-09 69.5 7.8 69 176-245 205-290 (404)
112 1icp_A OPR1, 12-oxophytodienoa 97.7 0.0001 3.5E-09 67.8 8.3 158 30-247 161-337 (376)
113 2qr6_A IMP dehydrogenase/GMP r 97.7 0.00031 1.1E-08 64.6 11.5 68 177-245 223-311 (393)
114 4fxs_A Inosine-5'-monophosphat 97.7 4.4E-05 1.5E-09 72.7 5.8 71 175-245 282-368 (496)
115 4avf_A Inosine-5'-monophosphat 97.6 4.2E-05 1.5E-09 72.7 5.3 70 176-245 281-366 (490)
116 3kts_A Glycerol uptake operon 97.6 0.0001 3.4E-09 61.8 6.9 137 78-247 43-186 (192)
117 1ypf_A GMP reductase; GUAC, pu 97.6 7.8E-05 2.7E-09 67.4 6.5 69 176-244 160-243 (336)
118 2nli_A Lactate oxidase; flavoe 97.6 5.8E-05 2E-09 69.3 5.7 70 176-245 240-318 (368)
119 1ka9_F Imidazole glycerol phos 97.6 7.6E-05 2.6E-09 64.0 5.9 73 174-246 32-110 (252)
120 1gox_A (S)-2-hydroxy-acid oxid 97.6 8.6E-05 2.9E-09 68.1 6.5 90 156-245 216-314 (370)
121 3aty_A Tcoye, prostaglandin F2 97.6 0.00047 1.6E-08 63.5 11.4 71 176-247 269-343 (379)
122 1p4c_A L(+)-mandelate dehydrog 97.6 3.6E-05 1.2E-09 70.9 3.8 72 174-245 234-312 (380)
123 3usb_A Inosine-5'-monophosphat 97.5 5E-05 1.7E-09 72.6 4.4 68 176-244 308-392 (511)
124 3cwo_X Beta/alpha-barrel prote 97.5 0.00019 6.7E-09 59.6 7.2 73 174-246 131-209 (237)
125 2yzr_A Pyridoxal biosynthesis 97.5 0.00036 1.2E-08 62.9 9.2 44 204-247 230-278 (330)
126 1o94_A Tmadh, trimethylamine d 97.5 0.00038 1.3E-08 68.9 10.3 46 202-247 279-328 (729)
127 1vcf_A Isopentenyl-diphosphate 97.5 0.00016 5.4E-09 65.2 6.9 69 177-245 196-290 (332)
128 1vhn_A Putative flavin oxidore 97.5 8.4E-05 2.9E-09 66.6 4.5 69 176-246 143-219 (318)
129 1jcn_A Inosine monophosphate d 97.4 6.2E-05 2.1E-09 71.7 3.4 70 176-246 307-393 (514)
130 1thf_D HISF protein; thermophI 97.4 8.2E-05 2.8E-09 63.8 3.8 73 174-246 31-109 (253)
131 1qo2_A Molecule: N-((5-phospho 97.4 9.1E-05 3.1E-09 63.4 3.5 72 174-246 31-108 (241)
132 3r2g_A Inosine 5'-monophosphat 97.4 0.00017 5.7E-09 66.1 5.4 68 176-245 152-233 (361)
133 2nzl_A Hydroxyacid oxidase 1; 97.4 0.00013 4.3E-09 67.6 4.4 70 176-245 263-341 (392)
134 2c6q_A GMP reductase 2; TIM ba 97.3 0.00017 5.9E-09 65.7 5.2 69 176-244 172-256 (351)
135 2qjg_A Putative aldolase MJ040 97.3 0.00016 5.6E-09 62.8 4.4 142 93-247 80-244 (273)
136 1kbi_A Cytochrome B2, L-LCR; f 97.3 0.00024 8.1E-09 67.9 5.3 69 176-245 354-437 (511)
137 2gou_A Oxidoreductase, FMN-bin 97.2 0.00032 1.1E-08 64.2 5.5 72 176-247 253-329 (365)
138 3k30_A Histamine dehydrogenase 97.2 0.0013 4.3E-08 64.7 10.0 196 46-247 54-331 (690)
139 2bdq_A Copper homeostasis prot 97.2 0.0068 2.3E-07 51.8 12.8 64 180-244 140-210 (224)
140 2y88_A Phosphoribosyl isomeras 97.1 0.00031 1.1E-08 59.8 4.4 70 175-245 33-108 (244)
141 2czd_A Orotidine 5'-phosphate 97.1 0.0021 7.1E-08 53.8 9.3 65 175-245 121-190 (208)
142 2agk_A 1-(5-phosphoribosyl)-5- 97.0 0.00056 1.9E-08 59.7 5.1 68 176-249 41-113 (260)
143 1h5y_A HISF; histidine biosynt 97.0 0.00032 1.1E-08 59.4 3.4 73 174-246 34-112 (253)
144 1vzw_A Phosphoribosyl isomeras 97.0 0.00038 1.3E-08 59.4 3.8 71 174-245 33-109 (244)
145 1q6o_A Humps, 3-keto-L-gulonat 97.0 0.0032 1.1E-07 53.0 9.4 44 202-245 149-196 (216)
146 1vrd_A Inosine-5'-monophosphat 97.0 0.00085 2.9E-08 63.4 5.9 68 176-244 289-373 (494)
147 3vkj_A Isopentenyl-diphosphate 96.9 0.00085 2.9E-08 61.6 5.1 69 176-245 201-301 (368)
148 4gj1_A 1-(5-phosphoribosyl)-5- 96.9 0.00046 1.6E-08 59.6 2.9 64 185-248 43-112 (243)
149 3sr7_A Isopentenyl-diphosphate 96.8 0.0012 4E-08 60.6 5.0 70 176-245 220-312 (365)
150 1twd_A Copper homeostasis prot 96.7 0.0092 3.1E-07 52.0 10.1 59 180-238 135-196 (256)
151 1w8s_A FBP aldolase, fructose- 96.7 0.0014 4.7E-08 57.3 5.0 63 179-246 165-237 (263)
152 1vc4_A Indole-3-glycerol phosp 96.6 0.0061 2.1E-07 52.9 8.3 71 173-244 65-139 (254)
153 1vkf_A Glycerol uptake operon 96.6 0.0034 1.1E-07 52.3 6.1 127 78-241 45-178 (188)
154 1me8_A Inosine-5'-monophosphat 96.5 0.0023 7.7E-08 60.9 5.4 70 174-244 293-385 (503)
155 3exr_A RMPD (hexulose-6-phosph 96.5 0.0033 1.1E-07 53.5 5.8 48 198-245 150-201 (221)
156 1zfj_A Inosine monophosphate d 96.5 0.0031 1.1E-07 59.4 6.0 67 177-244 286-369 (491)
157 4a3u_A NCR, NADH\:flavin oxido 96.5 0.01 3.6E-07 53.9 9.1 64 185-248 253-323 (358)
158 1jvn_A Glutamine, bifunctional 96.2 0.0064 2.2E-07 58.5 6.6 70 176-245 283-372 (555)
159 3qja_A IGPS, indole-3-glycerol 96.1 0.0047 1.6E-07 54.2 4.5 74 172-245 71-147 (272)
160 3tsm_A IGPS, indole-3-glycerol 96.0 0.019 6.3E-07 50.5 8.0 89 154-245 59-154 (272)
161 1to3_A Putative aldolase YIHT; 95.9 0.01 3.4E-07 52.9 5.8 71 175-246 179-260 (304)
162 2p10_A MLL9387 protein; putati 95.9 0.012 4E-07 52.0 6.1 70 176-245 173-264 (286)
163 1ea0_A Glutamate synthase [NAD 95.9 0.0072 2.5E-07 63.8 5.5 72 174-245 1005-1098(1479)
164 3glc_A Aldolase LSRF; TIM barr 95.8 0.0076 2.6E-07 53.6 4.7 64 175-245 191-262 (295)
165 2cu0_A Inosine-5'-monophosphat 95.8 0.0029 9.9E-08 59.8 2.0 59 186-245 287-362 (486)
166 1mzh_A Deoxyribose-phosphate a 95.8 0.021 7E-07 48.5 7.2 62 174-236 133-200 (225)
167 1ofd_A Ferredoxin-dependent gl 95.8 0.0078 2.7E-07 63.7 5.3 72 174-245 1040-1133(1520)
168 4af0_A Inosine-5'-monophosphat 95.7 0.045 1.6E-06 52.4 9.8 39 206-244 376-417 (556)
169 2qr6_A IMP dehydrogenase/GMP r 95.7 0.022 7.6E-07 52.1 7.4 67 175-241 167-240 (393)
170 1aj0_A DHPS, dihydropteroate s 95.5 0.064 2.2E-06 47.3 9.3 98 36-152 38-135 (282)
171 1o4u_A Type II quinolic acid p 95.4 0.018 6.2E-07 50.9 5.5 62 177-244 204-272 (285)
172 1x1o_A Nicotinate-nucleotide p 95.0 0.034 1.2E-06 49.1 6.1 60 178-243 208-271 (286)
173 3tr9_A Dihydropteroate synthas 94.9 0.083 2.8E-06 47.3 8.2 96 37-151 50-149 (314)
174 2b7n_A Probable nicotinate-nuc 94.8 0.019 6.5E-07 50.4 3.6 60 179-244 195-261 (273)
175 2yxb_A Coenzyme B12-dependent 94.6 0.06 2E-06 43.3 6.1 69 171-239 54-127 (161)
176 2jbm_A Nicotinate-nucleotide p 94.5 0.025 8.4E-07 50.3 3.8 64 174-244 206-276 (299)
177 1qap_A Quinolinic acid phospho 94.4 0.075 2.6E-06 47.1 6.8 63 174-243 217-283 (296)
178 1zfj_A Inosine monophosphate d 94.3 0.067 2.3E-06 50.2 6.5 66 175-241 234-303 (491)
179 3c2e_A Nicotinate-nucleotide p 94.1 0.025 8.7E-07 50.1 2.9 60 179-244 212-281 (294)
180 3tjl_A NADPH dehydrogenase; OL 94.0 0.034 1.2E-06 51.5 3.8 43 205-247 304-353 (407)
181 1vrd_A Inosine-5'-monophosphat 94.0 0.079 2.7E-06 49.8 6.2 65 176-241 239-307 (494)
182 2jgq_A Triosephosphate isomera 93.9 0.029 9.9E-07 48.2 2.9 41 205-245 177-222 (233)
183 3tqv_A Nicotinate-nucleotide p 93.5 0.092 3.1E-06 46.4 5.4 63 174-243 207-273 (287)
184 2dqw_A Dihydropteroate synthas 93.5 0.08 2.7E-06 47.0 5.1 96 36-151 52-147 (294)
185 3tjx_A Dihydroorotate dehydrog 93.5 0.027 9.2E-07 50.9 2.0 44 204-247 266-313 (354)
186 3noy_A 4-hydroxy-3-methylbut-2 93.5 0.12 4E-06 47.0 6.1 150 43-222 53-212 (366)
187 2y5s_A DHPS, dihydropteroate s 93.4 0.13 4.5E-06 45.5 6.3 96 36-151 46-141 (294)
188 1pii_A N-(5'phosphoribosyl)ant 93.3 0.049 1.7E-06 51.1 3.4 161 41-248 267-436 (452)
189 1xg4_A Probable methylisocitra 93.2 0.25 8.5E-06 43.7 7.8 178 45-243 33-238 (295)
190 3m47_A Orotidine 5'-phosphate 93.0 0.37 1.3E-05 40.8 8.3 161 49-245 37-207 (228)
191 1yya_A Triosephosphate isomera 92.9 0.051 1.7E-06 47.1 2.8 32 214-245 204-238 (250)
192 2btm_A TIM, protein (triosepho 92.9 0.051 1.8E-06 47.2 2.8 32 214-245 204-238 (252)
193 3paj_A Nicotinate-nucleotide p 92.9 0.14 4.8E-06 45.9 5.7 62 174-242 240-305 (320)
194 3m9y_A Triosephosphate isomera 92.9 0.1 3.5E-06 45.3 4.6 31 214-244 208-241 (254)
195 4fxs_A Inosine-5'-monophosphat 92.8 0.13 4.5E-06 48.6 5.8 63 177-240 234-300 (496)
196 4avf_A Inosine-5'-monophosphat 92.8 0.14 4.9E-06 48.3 5.9 64 176-240 231-298 (490)
197 3igs_A N-acetylmannosamine-6-p 92.7 0.24 8.1E-06 42.2 6.6 66 171-244 34-112 (232)
198 1tx2_A DHPS, dihydropteroate s 92.6 0.69 2.4E-05 40.9 9.8 163 36-222 63-238 (297)
199 1w5q_A Delta-aminolevulinic ac 92.5 1 3.5E-05 40.3 10.6 31 185-219 252-282 (337)
200 1hg3_A Triosephosphate isomera 92.5 0.044 1.5E-06 46.8 1.8 41 208-248 169-213 (225)
201 1eye_A DHPS 1, dihydropteroate 92.4 0.39 1.3E-05 42.1 7.9 100 30-152 27-126 (280)
202 4fo4_A Inosine 5'-monophosphat 92.4 0.16 5.4E-06 46.4 5.5 63 177-240 111-177 (366)
203 2vp8_A Dihydropteroate synthas 92.4 0.32 1.1E-05 43.5 7.4 98 35-151 64-161 (318)
204 1mo0_A TIM, triosephosphate is 92.4 0.11 3.7E-06 45.7 4.2 32 214-245 222-256 (275)
205 1r2r_A TIM, triosephosphate is 92.3 0.1 3.6E-06 45.1 4.0 32 214-245 203-237 (248)
206 4djd_D C/Fe-SP, corrinoid/iron 92.3 0.62 2.1E-05 41.8 9.1 65 27-102 75-139 (323)
207 2i9e_A Triosephosphate isomera 92.3 0.093 3.2E-06 45.7 3.6 32 214-245 202-236 (259)
208 2i2x_B MTAC, methyltransferase 92.3 0.15 5.2E-06 43.9 5.0 83 155-237 141-227 (258)
209 2vxn_A Triosephosphate isomera 92.2 0.07 2.4E-06 46.3 2.8 32 214-245 206-240 (251)
210 1qpo_A Quinolinate acid phosph 92.2 0.19 6.7E-06 44.2 5.7 65 177-244 205-273 (284)
211 2yc6_A Triosephosphate isomera 92.2 0.071 2.4E-06 46.4 2.8 31 214-244 208-241 (257)
212 2j27_A Triosephosphate isomera 92.2 0.08 2.7E-06 45.9 3.1 32 214-245 205-239 (250)
213 3r2g_A Inosine 5'-monophosphat 92.2 0.16 5.3E-06 46.4 5.1 65 175-240 101-169 (361)
214 2v5b_A Triosephosphate isomera 92.1 0.058 2E-06 46.6 2.1 30 214-243 199-231 (244)
215 1y80_A Predicted cobalamin bin 92.1 0.27 9.4E-06 40.7 6.2 82 155-237 106-194 (210)
216 1m6j_A TIM, TPI, triosephospha 92.1 0.12 4E-06 45.1 4.0 32 214-245 212-246 (261)
217 3mcm_A 2-amino-4-hydroxy-6-hyd 92.0 0.22 7.6E-06 46.5 6.1 99 36-151 212-316 (442)
218 1o5x_A TIM, triosephosphate is 91.9 0.034 1.1E-06 48.2 0.4 32 214-245 203-237 (248)
219 1b9b_A TIM, protein (triosepho 91.9 0.052 1.8E-06 47.2 1.5 32 214-245 206-240 (255)
220 1aw2_A Triosephosphate isomera 91.8 0.11 3.9E-06 45.1 3.7 32 214-245 206-240 (256)
221 3ezx_A MMCP 1, monomethylamine 91.8 0.14 4.9E-06 43.0 4.1 81 155-236 110-199 (215)
222 1ney_A TIM, triosephosphate is 91.7 0.033 1.1E-06 48.2 0.1 32 214-245 202-236 (247)
223 2c6q_A GMP reductase 2; TIM ba 91.5 0.15 5E-06 46.2 4.2 54 186-240 132-189 (351)
224 1tre_A Triosephosphate isomera 91.5 0.059 2E-06 46.9 1.4 32 214-245 204-238 (255)
225 3th6_A Triosephosphate isomera 91.5 0.13 4.5E-06 44.5 3.6 31 214-244 203-236 (249)
226 3khj_A Inosine-5-monophosphate 91.5 0.23 7.9E-06 45.1 5.4 63 177-240 108-173 (361)
227 1p0k_A Isopentenyl-diphosphate 91.4 0.4 1.4E-05 42.9 6.9 65 176-240 130-209 (349)
228 1w1z_A Delta-aminolevulinic ac 91.4 0.89 3E-05 40.5 8.9 31 185-219 245-275 (328)
229 3sgz_A Hydroxyacid oxidase 2; 91.3 0.34 1.2E-05 44.0 6.4 41 201-241 204-246 (352)
230 1pv8_A Delta-aminolevulinic ac 91.2 1 3.4E-05 40.2 9.0 31 185-219 244-275 (330)
231 3ve9_A Orotidine-5'-phosphate 91.1 0.24 8.1E-06 41.8 4.8 66 174-245 116-185 (215)
232 3vkj_A Isopentenyl-diphosphate 91.1 0.19 6.5E-06 45.8 4.5 39 203-241 176-219 (368)
233 4af0_A Inosine-5'-monophosphat 91.0 0.29 9.8E-06 46.9 5.7 57 184-241 291-351 (556)
234 1eep_A Inosine 5'-monophosphat 91.0 0.36 1.2E-05 44.2 6.3 64 176-240 155-222 (404)
235 3krs_A Triosephosphate isomera 90.6 0.082 2.8E-06 46.4 1.5 32 214-245 226-260 (271)
236 3qst_A Triosephosphate isomera 90.5 0.075 2.6E-06 46.2 1.2 32 214-245 207-241 (255)
237 1w0m_A TIM, triosephosphate is 90.4 0.12 4.3E-06 44.0 2.4 41 208-248 166-210 (226)
238 2yci_X 5-methyltetrahydrofolat 90.2 0.63 2.2E-05 40.6 6.8 93 36-151 34-126 (271)
239 3ffs_A Inosine-5-monophosphate 90.0 0.36 1.2E-05 44.5 5.3 63 177-240 147-212 (400)
240 1vqt_A Orotidine 5'-phosphate 89.9 0.33 1.1E-05 40.7 4.7 58 175-245 128-197 (213)
241 3gnn_A Nicotinate-nucleotide p 89.9 0.31 1.1E-05 43.2 4.7 63 174-243 218-284 (298)
242 3q58_A N-acetylmannosamine-6-p 89.9 0.85 2.9E-05 38.6 7.3 66 171-244 34-112 (229)
243 1h7n_A 5-aminolaevulinic acid 89.8 1.6 5.3E-05 39.2 9.0 40 176-219 243-286 (342)
244 4g1k_A Triosephosphate isomera 89.2 0.18 6.1E-06 44.2 2.5 29 214-242 226-257 (272)
245 2qiw_A PEP phosphonomutase; st 89.1 2.5 8.5E-05 36.4 9.7 176 46-241 37-237 (255)
246 1f6y_A 5-methyltetrahydrofolat 89.0 1 3.5E-05 39.0 7.2 158 36-220 25-196 (262)
247 1jcn_A Inosine monophosphate d 89.0 0.6 2E-05 44.0 6.2 65 175-240 256-324 (514)
248 3sr7_A Isopentenyl-diphosphate 88.5 0.63 2.1E-05 42.4 5.7 67 175-241 157-238 (365)
249 1ydn_A Hydroxymethylglutaryl-C 88.4 1.1 3.9E-05 38.9 7.2 176 43-238 33-229 (295)
250 1zco_A 2-dehydro-3-deoxyphosph 88.4 3.6 0.00012 35.5 10.3 186 16-243 24-230 (262)
251 1eix_A Orotidine 5'-monophosph 88.2 0.39 1.3E-05 41.0 4.0 52 185-245 161-226 (245)
252 1ypf_A GMP reductase; GUAC, pu 87.9 0.61 2.1E-05 41.6 5.3 61 180-241 112-178 (336)
253 3ru6_A Orotidine 5'-phosphate 87.9 0.65 2.2E-05 41.2 5.3 59 178-245 163-235 (303)
254 2yyu_A Orotidine 5'-phosphate 87.8 0.42 1.4E-05 40.8 3.9 52 185-245 155-220 (246)
255 1l6s_A Porphobilinogen synthas 87.7 1.9 6.5E-05 38.3 8.1 40 176-219 226-268 (323)
256 3oa3_A Aldolase; structural ge 87.6 1.8 6.2E-05 38.1 7.9 56 180-235 195-258 (288)
257 2fli_A Ribulose-phosphate 3-ep 87.5 2 6.8E-05 35.2 7.9 69 173-241 16-92 (220)
258 3usb_A Inosine-5'-monophosphat 87.2 0.89 3.1E-05 43.1 6.2 64 177-240 259-325 (511)
259 4dbe_A Orotidine 5'-phosphate 87.1 0.67 2.3E-05 39.1 4.7 64 176-245 125-192 (222)
260 2v82_A 2-dehydro-3-deoxy-6-pho 87.0 0.68 2.3E-05 38.0 4.7 65 174-241 20-88 (212)
261 3l0g_A Nicotinate-nucleotide p 86.9 0.84 2.9E-05 40.5 5.4 63 174-243 216-282 (300)
262 3ta6_A Triosephosphate isomera 86.8 0.69 2.4E-05 40.3 4.7 29 214-242 210-241 (267)
263 1dbt_A Orotidine 5'-phosphate 86.8 0.5 1.7E-05 40.1 3.8 53 184-245 153-219 (239)
264 3k13_A 5-methyltetrahydrofolat 86.7 0.51 1.7E-05 41.9 3.9 95 36-151 37-134 (300)
265 4adt_A Pyridoxine biosynthetic 86.6 1.2 4E-05 39.4 6.2 63 175-237 30-104 (297)
266 1gox_A (S)-2-hydroxy-acid oxid 86.2 2.6 9E-05 38.0 8.5 40 202-241 213-254 (370)
267 3ih1_A Methylisocitrate lyase; 86.1 2.9 9.8E-05 37.1 8.5 176 46-243 46-246 (305)
268 3bul_A Methionine synthase; tr 86.0 0.77 2.6E-05 44.3 5.0 76 154-229 115-195 (579)
269 3flu_A DHDPS, dihydrodipicolin 85.9 11 0.00038 32.7 12.3 171 43-242 35-213 (297)
270 2nzl_A Hydroxyacid oxidase 1; 85.5 1.7 6E-05 39.7 7.0 40 202-241 240-281 (392)
271 1o66_A 3-methyl-2-oxobutanoate 84.7 5.7 0.00019 34.7 9.5 149 45-219 33-201 (275)
272 3kxq_A Triosephosphate isomera 84.7 0.42 1.4E-05 41.9 2.3 29 214-242 227-258 (275)
273 3dxi_A Putative aldolase; TIM 84.3 2 6.9E-05 38.2 6.7 168 43-237 31-215 (320)
274 1ccw_A Protein (glutamate muta 84.3 0.54 1.8E-05 36.5 2.6 53 171-223 39-94 (137)
275 1req_A Methylmalonyl-COA mutas 84.1 0.92 3.1E-05 44.9 4.7 70 170-239 631-705 (727)
276 3fkr_A L-2-keto-3-deoxyarabona 84.1 1.5 5.1E-05 38.7 5.7 58 184-242 40-112 (309)
277 1vli_A Spore coat polysacchari 83.7 4.5 0.00015 37.0 8.8 115 108-232 50-177 (385)
278 3obk_A Delta-aminolevulinic ac 83.7 5.6 0.00019 35.7 9.2 31 185-219 259-289 (356)
279 2ftp_A Hydroxymethylglutaryl-C 83.6 4.6 0.00016 35.3 8.6 172 43-237 37-232 (302)
280 1geq_A Tryptophan synthase alp 83.5 0.9 3.1E-05 38.2 3.9 39 203-241 69-116 (248)
281 1xrs_B D-lysine 5,6-aminomutas 83.3 1.7 5.8E-05 37.7 5.5 68 170-238 164-239 (262)
282 3ndo_A Deoxyribose-phosphate a 83.1 2.4 8.2E-05 36.1 6.4 55 180-235 153-214 (231)
283 2xij_A Methylmalonyl-COA mutas 82.8 1.5 5E-05 43.7 5.5 69 171-239 640-713 (762)
284 2nli_A Lactate oxidase; flavoe 82.6 3 0.0001 37.8 7.2 40 202-241 217-258 (368)
285 3kp1_A D-ornithine aminomutase 82.5 1.6 5.6E-05 42.7 5.5 70 169-238 640-716 (763)
286 2pgw_A Muconate cycloisomerase 81.9 3.4 0.00012 37.2 7.3 60 177-240 208-271 (384)
287 3ngj_A Deoxyribose-phosphate a 81.6 3.2 0.00011 35.5 6.6 89 139-235 130-224 (239)
288 1ub3_A Aldolase protein; schif 81.2 4.3 0.00015 34.1 7.2 124 108-241 77-208 (220)
289 3qze_A DHDPS, dihydrodipicolin 80.9 8 0.00027 34.0 9.2 170 43-242 51-229 (314)
290 1me8_A Inosine-5'-monophosphat 80.9 1.9 6.4E-05 40.6 5.3 62 179-241 247-313 (503)
291 1kbi_A Cytochrome B2, L-LCR; f 80.8 3.8 0.00013 38.8 7.5 39 203-241 332-372 (511)
292 1mdl_A Mandelate racemase; iso 80.7 2.3 7.8E-05 37.9 5.6 91 139-240 176-270 (359)
293 3cpr_A Dihydrodipicolinate syn 80.6 4.7 0.00016 35.3 7.6 58 184-242 48-120 (304)
294 1xky_A Dihydrodipicolinate syn 80.5 4 0.00014 35.8 7.1 58 184-242 44-116 (301)
295 2ovl_A Putative racemase; stru 80.2 2.6 8.8E-05 37.8 5.8 91 139-240 178-272 (371)
296 2nql_A AGR_PAT_674P, isomerase 80.1 2.8 9.5E-05 37.9 6.1 88 142-240 198-289 (388)
297 3l21_A DHDPS, dihydrodipicolin 80.1 3.8 0.00013 36.0 6.8 57 184-241 47-118 (304)
298 2vef_A Dihydropteroate synthas 80.0 1.7 5.8E-05 38.6 4.5 99 35-151 32-130 (314)
299 3flu_A DHDPS, dihydrodipicolin 80.0 4.3 0.00015 35.4 7.1 57 184-241 39-110 (297)
300 2r8w_A AGR_C_1641P; APC7498, d 79.8 12 0.0004 33.2 10.0 171 43-242 62-244 (332)
301 3s5o_A 4-hydroxy-2-oxoglutarat 79.6 3.8 0.00013 36.0 6.7 57 184-241 46-117 (307)
302 3daq_A DHDPS, dihydrodipicolin 79.5 3.5 0.00012 35.9 6.4 57 184-241 34-105 (292)
303 1m3u_A 3-methyl-2-oxobutanoate 79.5 17 0.00058 31.4 10.6 148 45-219 33-201 (264)
304 1q7z_A 5-methyltetrahydrofolat 79.5 5.5 0.00019 38.2 8.2 93 36-151 340-432 (566)
305 1y0e_A Putative N-acetylmannos 79.3 5.5 0.00019 32.5 7.2 64 173-244 23-99 (223)
306 1rvk_A Isomerase/lactonizing e 79.3 4.5 0.00015 36.3 7.2 89 140-240 188-282 (382)
307 2ojp_A DHDPS, dihydrodipicolin 79.2 4.3 0.00015 35.3 6.9 58 184-242 33-105 (292)
308 2wkj_A N-acetylneuraminate lya 79.2 4.1 0.00014 35.7 6.7 58 184-242 43-115 (303)
309 3si9_A DHDPS, dihydrodipicolin 79.2 3.8 0.00013 36.2 6.5 57 184-241 54-125 (315)
310 3b4u_A Dihydrodipicolinate syn 79.0 4.5 0.00016 35.2 6.9 58 184-242 35-107 (294)
311 3l21_A DHDPS, dihydrodipicolin 79.0 14 0.00047 32.3 10.1 170 43-242 43-219 (304)
312 3na8_A Putative dihydrodipicol 78.9 7.8 0.00027 34.1 8.5 171 43-242 52-231 (315)
313 2ehh_A DHDPS, dihydrodipicolin 78.9 4.5 0.00015 35.2 6.8 58 184-242 32-104 (294)
314 3tak_A DHDPS, dihydrodipicolin 78.8 4.7 0.00016 35.0 7.0 58 184-242 33-105 (291)
315 1vcf_A Isopentenyl-diphosphate 78.7 2.6 8.8E-05 37.3 5.3 74 42-122 198-285 (332)
316 1oy0_A Ketopantoate hydroxymet 78.4 7.4 0.00025 34.0 8.0 150 45-219 50-219 (281)
317 2rdx_A Mandelate racemase/muco 78.3 4 0.00014 36.6 6.5 86 141-240 178-267 (379)
318 2yxg_A DHDPS, dihydrodipicolin 78.3 4.6 0.00016 35.1 6.7 58 184-242 32-104 (289)
319 3m5v_A DHDPS, dihydrodipicolin 78.0 18 0.00062 31.4 10.5 198 3-242 8-214 (301)
320 3r12_A Deoxyribose-phosphate a 78.0 5 0.00017 34.7 6.7 56 179-235 179-240 (260)
321 3tfx_A Orotidine 5'-phosphate 77.8 1.8 6.1E-05 37.5 3.8 60 177-245 148-221 (259)
322 2r8w_A AGR_C_1641P; APC7498, d 77.7 4.3 0.00015 36.2 6.4 57 185-242 67-138 (332)
323 3qfe_A Putative dihydrodipicol 77.6 4.3 0.00015 35.9 6.4 58 184-242 43-115 (318)
324 3qze_A DHDPS, dihydrodipicolin 77.6 4.2 0.00015 35.9 6.3 57 184-241 55-126 (314)
325 2ojp_A DHDPS, dihydrodipicolin 77.5 17 0.00058 31.4 10.2 170 43-242 29-207 (292)
326 3iv3_A Tagatose 1,6-diphosphat 77.5 5 0.00017 36.0 6.7 41 205-245 236-285 (332)
327 3s6d_A Putative triosephosphat 77.4 0.54 1.9E-05 41.8 0.4 31 214-244 260-293 (310)
328 3si9_A DHDPS, dihydrodipicolin 77.4 10 0.00035 33.4 8.8 171 43-242 50-229 (315)
329 3ble_A Citramalate synthase fr 77.4 14 0.00049 32.7 9.8 165 35-237 40-242 (337)
330 2nv1_A Pyridoxal biosynthesis 77.3 6.8 0.00023 34.1 7.6 66 176-242 31-108 (305)
331 2v9d_A YAGE; dihydrodipicolini 77.3 4.9 0.00017 35.9 6.7 58 184-242 63-135 (343)
332 1o5k_A DHDPS, dihydrodipicolin 77.2 4.6 0.00016 35.4 6.4 58 184-242 44-116 (306)
333 2qgy_A Enolase from the enviro 77.0 3.7 0.00013 37.1 5.9 89 140-239 182-274 (391)
334 1f6k_A N-acetylneuraminate lya 77.0 4.2 0.00014 35.4 6.1 68 174-242 25-108 (293)
335 3h5d_A DHDPS, dihydrodipicolin 76.8 7.2 0.00025 34.3 7.6 67 174-241 29-111 (311)
336 2zbt_A Pyridoxal biosynthesis 76.8 5.2 0.00018 34.5 6.6 62 176-237 31-104 (297)
337 3a5f_A Dihydrodipicolinate syn 76.6 4.8 0.00016 35.0 6.3 58 184-242 33-105 (291)
338 1xky_A Dihydrodipicolinate syn 76.6 20 0.00067 31.2 10.4 170 43-242 40-218 (301)
339 3o1n_A 3-dehydroquinate dehydr 76.5 3.3 0.00011 36.0 5.2 56 30-99 50-105 (276)
340 2cu0_A Inosine-5'-monophosphat 76.5 2.5 8.4E-05 39.5 4.7 60 179-240 233-294 (486)
341 1n7k_A Deoxyribose-phosphate a 76.3 5.9 0.0002 33.6 6.6 64 175-238 150-221 (234)
342 2og9_A Mandelate racemase/muco 76.2 4.1 0.00014 36.9 6.0 90 139-239 194-287 (393)
343 3dz1_A Dihydrodipicolinate syn 76.2 4.9 0.00017 35.4 6.3 57 184-241 40-110 (313)
344 1p4c_A L(+)-mandelate dehydrog 75.9 2.8 9.6E-05 38.0 4.8 39 202-241 213-254 (380)
345 3i65_A Dihydroorotate dehydrog 75.9 0.71 2.4E-05 42.8 0.8 78 43-122 290-374 (415)
346 2h9a_B CO dehydrogenase/acetyl 75.8 4.4 0.00015 35.9 5.9 150 36-220 74-245 (310)
347 4dpp_A DHDPS 2, dihydrodipicol 75.7 5.6 0.00019 36.0 6.7 57 184-241 91-162 (360)
348 2wqp_A Polysialic acid capsule 75.7 5.3 0.00018 36.0 6.5 79 149-232 88-167 (349)
349 1yxy_A Putative N-acetylmannos 75.6 11 0.00039 30.9 8.2 63 174-244 37-112 (234)
350 3na8_A Putative dihydrodipicol 75.6 4.1 0.00014 36.0 5.6 58 184-242 56-128 (315)
351 3e96_A Dihydrodipicolinate syn 75.5 3.6 0.00012 36.3 5.2 58 184-242 44-115 (316)
352 1tv5_A Dhodehase, dihydroorota 75.4 1.9 6.6E-05 40.1 3.6 78 43-122 318-402 (443)
353 3eb2_A Putative dihydrodipicol 75.1 4.2 0.00014 35.6 5.6 39 202-242 169-210 (300)
354 2rfg_A Dihydrodipicolinate syn 74.8 4.4 0.00015 35.4 5.6 57 184-241 32-103 (297)
355 3m5v_A DHDPS, dihydrodipicolin 74.6 6 0.0002 34.6 6.4 66 175-241 30-111 (301)
356 3stp_A Galactonate dehydratase 74.5 4.4 0.00015 37.2 5.7 89 139-239 217-310 (412)
357 3tak_A DHDPS, dihydrodipicolin 74.4 14 0.00048 31.9 8.8 170 43-242 29-207 (291)
358 2vc6_A MOSA, dihydrodipicolina 73.9 4.6 0.00016 35.1 5.5 66 176-242 24-104 (292)
359 3h5d_A DHDPS, dihydrodipicolin 73.9 6.5 0.00022 34.6 6.5 188 15-242 17-213 (311)
360 3zwt_A Dihydroorotate dehydrog 73.9 2 6.7E-05 39.0 3.2 78 43-122 241-327 (367)
361 3s5o_A 4-hydroxy-2-oxoglutarat 73.8 38 0.0013 29.4 11.5 60 43-110 42-101 (307)
362 2rfg_A Dihydrodipicolinate syn 73.8 6.7 0.00023 34.2 6.5 167 43-242 28-206 (297)
363 3vav_A 3-methyl-2-oxobutanoate 73.5 21 0.00072 31.0 9.6 149 45-218 45-212 (275)
364 1gvf_A Tagatose-bisphosphate a 73.5 9.2 0.00031 33.5 7.3 51 183-233 165-223 (286)
365 2dgd_A 223AA long hypothetical 73.5 23 0.00078 28.9 9.5 46 173-221 156-203 (223)
366 2qde_A Mandelate racemase/muco 73.4 8.2 0.00028 34.8 7.3 90 139-239 176-269 (397)
367 3tml_A 2-dehydro-3-deoxyphosph 72.9 21 0.00071 31.2 9.4 165 25-219 24-201 (288)
368 1vhc_A Putative KHG/KDPG aldol 72.9 6.9 0.00023 32.8 6.1 65 173-241 29-97 (224)
369 3jva_A Dipeptide epimerase; en 72.8 6 0.0002 35.2 6.1 91 138-240 169-264 (354)
370 2gl5_A Putative dehydratase pr 72.3 5.9 0.0002 35.9 6.0 89 140-239 206-298 (410)
371 2poz_A Putative dehydratase; o 72.1 5.5 0.00019 35.9 5.8 89 140-239 187-279 (392)
372 3go2_A Putative L-alanine-DL-g 72.1 8.4 0.00029 35.1 7.0 89 140-241 201-293 (409)
373 2hzg_A Mandelate racemase/muco 71.8 6.4 0.00022 35.6 6.1 93 139-240 180-277 (401)
374 2p8b_A Mandelate racemase/muco 71.8 8.4 0.00029 34.3 6.8 90 139-240 172-267 (369)
375 3cpr_A Dihydrodipicolinate syn 71.7 28 0.00095 30.3 10.1 170 43-242 44-220 (304)
376 3i4k_A Muconate lactonizing en 71.0 5.6 0.00019 35.9 5.5 91 138-240 180-275 (383)
377 3rcy_A Mandelate racemase/muco 71.0 5.9 0.0002 36.5 5.7 89 139-239 190-283 (433)
378 1f76_A Dihydroorotate dehydrog 70.9 4.7 0.00016 35.5 4.9 77 43-121 232-317 (336)
379 2ox4_A Putative mandelate race 70.5 5.5 0.00019 36.0 5.4 88 140-239 197-289 (403)
380 3ozy_A Putative mandelate race 70.4 4.2 0.00014 36.9 4.5 91 138-240 181-277 (389)
381 1i4n_A Indole-3-glycerol phosp 70.3 17 0.0006 31.0 8.2 67 172-240 60-130 (251)
382 3mwc_A Mandelate racemase/muco 70.0 11 0.00039 34.1 7.4 90 138-240 191-285 (400)
383 3dz1_A Dihydrodipicolinate syn 69.9 6.2 0.00021 34.7 5.4 69 43-120 36-107 (313)
384 1xg4_A Probable methylisocitra 69.5 1.6 5.3E-05 38.6 1.4 47 35-101 166-212 (295)
385 3mqt_A Mandelate racemase/muco 69.5 4.6 0.00016 36.6 4.6 91 138-239 186-281 (394)
386 3eb2_A Putative dihydrodipicol 69.4 3.6 0.00012 36.0 3.7 58 184-242 36-108 (300)
387 2o56_A Putative mandelate race 69.1 5.8 0.0002 35.9 5.2 88 140-239 203-295 (407)
388 3d0c_A Dihydrodipicolinate syn 69.1 5.8 0.0002 34.9 5.1 58 184-242 44-115 (314)
389 1sjd_A N-acylamino acid racema 69.1 14 0.00047 32.8 7.6 89 138-239 169-262 (368)
390 2ehh_A DHDPS, dihydrodipicolin 68.9 27 0.00091 30.2 9.3 170 43-242 28-207 (294)
391 1tkk_A Similar to chloromucona 68.5 12 0.0004 33.2 7.1 90 139-240 172-268 (366)
392 1wbh_A KHG/KDPG aldolase; lyas 68.4 9.6 0.00033 31.6 6.0 65 173-241 28-96 (214)
393 3vzx_A Heptaprenylglyceryl pho 68.4 5 0.00017 34.0 4.3 56 183-244 28-86 (228)
394 1nu5_A Chloromuconate cycloiso 68.4 8.6 0.00029 34.2 6.1 89 140-240 176-269 (370)
395 3ixl_A Amdase, arylmalonate de 68.3 7.9 0.00027 32.6 5.6 46 172-220 164-211 (240)
396 3nvt_A 3-deoxy-D-arabino-heptu 68.2 38 0.0013 30.7 10.5 167 43-244 163-350 (385)
397 3q94_A Fructose-bisphosphate a 67.6 12 0.00042 32.7 6.7 52 182-233 168-227 (288)
398 1chr_A Chloromuconate cycloiso 67.2 11 0.00037 33.7 6.6 91 138-240 174-269 (370)
399 2pp0_A L-talarate/galactarate 67.2 8.5 0.00029 34.8 5.9 89 139-239 207-300 (398)
400 4hb7_A Dihydropteroate synthas 67.0 7.7 0.00026 33.7 5.3 88 26-121 20-107 (270)
401 3b4u_A Dihydrodipicolinate syn 67.0 29 0.00098 30.0 9.1 172 43-242 31-214 (294)
402 2wkj_A N-acetylneuraminate lya 66.8 34 0.0012 29.7 9.6 170 43-242 39-217 (303)
403 3mkc_A Racemase; metabolic pro 66.7 5.5 0.00019 36.1 4.5 91 138-239 191-286 (394)
404 1twd_A Copper homeostasis prot 66.5 18 0.00063 31.1 7.5 70 179-249 14-101 (256)
405 3eeg_A 2-isopropylmalate synth 66.3 26 0.0009 30.9 8.8 77 139-223 124-205 (325)
406 3vcn_A Mannonate dehydratase; 66.2 5.6 0.00019 36.5 4.5 89 139-239 214-307 (425)
407 3sbf_A Mandelate racemase / mu 65.9 7.2 0.00025 35.4 5.1 89 140-240 189-282 (401)
408 3dg3_A Muconate cycloisomerase 65.8 9.4 0.00032 34.1 5.8 91 138-240 171-266 (367)
409 1f6k_A N-acetylneuraminate lya 65.5 34 0.0012 29.5 9.3 39 202-242 169-209 (293)
410 4h3d_A 3-dehydroquinate dehydr 65.4 10 0.00034 32.5 5.7 59 28-101 28-86 (258)
411 3daq_A DHDPS, dihydrodipicolin 65.3 40 0.0014 29.0 9.7 172 43-242 30-209 (292)
412 3rr1_A GALD, putative D-galact 65.3 4.9 0.00017 36.7 3.9 89 139-239 165-258 (405)
413 3eez_A Putative mandelate race 65.2 6.6 0.00023 35.3 4.7 39 202-240 225-267 (378)
414 3my9_A Muconate cycloisomerase 65.2 8.7 0.0003 34.5 5.5 90 138-239 177-271 (377)
415 3dip_A Enolase; structural gen 65.1 16 0.00053 33.3 7.3 91 139-240 200-295 (410)
416 3v3w_A Starvation sensing prot 65.0 6.6 0.00023 36.0 4.7 88 140-239 214-306 (424)
417 3sjn_A Mandelate racemase/muco 64.8 6.7 0.00023 35.2 4.7 91 138-239 179-274 (374)
418 3vnd_A TSA, tryptophan synthas 64.7 5.3 0.00018 34.6 3.8 20 43-66 117-136 (267)
419 2vc6_A MOSA, dihydrodipicolina 64.3 12 0.0004 32.5 6.0 60 174-233 83-152 (292)
420 2qq6_A Mandelate racemase/muco 64.1 15 0.00051 33.2 6.9 89 140-239 198-290 (410)
421 2gdq_A YITF; mandelate racemas 64.0 8.5 0.00029 34.6 5.2 90 139-239 171-265 (382)
422 1w8s_A FBP aldolase, fructose- 63.9 25 0.00084 30.0 7.9 68 45-122 101-179 (263)
423 3ugv_A Enolase; enzyme functio 63.7 9.2 0.00031 34.6 5.4 90 138-239 205-299 (390)
424 2yxg_A DHDPS, dihydrodipicolin 63.5 30 0.001 29.8 8.5 171 43-242 28-205 (289)
425 4e5t_A Mandelate racemase / mu 63.4 5.2 0.00018 36.4 3.7 89 139-239 195-288 (404)
426 2f6u_A GGGPS, (S)-3-O-geranylg 63.2 6 0.0002 33.6 3.8 63 176-244 23-88 (234)
427 2xed_A Putative maleate isomer 63.2 8.7 0.0003 33.0 4.9 45 173-220 194-239 (273)
428 3r4e_A Mandelate racemase/muco 62.5 6.3 0.00021 36.1 4.1 88 140-239 208-300 (418)
429 3i6e_A Muconate cycloisomerase 62.3 18 0.00061 32.5 7.0 90 138-240 179-273 (385)
430 1zlp_A PSR132, petal death pro 62.3 3.8 0.00013 36.5 2.4 47 34-100 187-233 (318)
431 3tj4_A Mandelate racemase; eno 62.3 10 0.00036 33.9 5.5 90 138-239 183-277 (372)
432 4e4u_A Mandalate racemase/muco 62.2 9 0.00031 35.0 5.0 90 138-239 187-281 (412)
433 4a29_A Engineered retro-aldol 62.0 33 0.0011 29.5 8.3 64 175-240 66-133 (258)
434 3ddm_A Putative mandelate race 62.0 8.2 0.00028 35.0 4.7 90 139-239 186-280 (392)
435 3w01_A Heptaprenylglyceryl pho 61.9 7.9 0.00027 32.9 4.3 58 182-245 32-92 (235)
436 1rpx_A Protein (ribulose-phosp 61.8 28 0.00094 28.5 7.7 69 173-241 23-99 (230)
437 1wa3_A 2-keto-3-deoxy-6-phosph 61.2 12 0.0004 30.1 5.2 66 174-243 23-92 (205)
438 3ewb_X 2-isopropylmalate synth 61.2 32 0.0011 29.8 8.2 150 31-219 30-202 (293)
439 3iwp_A Copper homeostasis prot 60.9 20 0.00067 31.4 6.7 63 179-241 52-132 (287)
440 3toy_A Mandelate racemase/muco 60.8 9.2 0.00032 34.5 4.8 90 138-239 199-293 (383)
441 1viz_A PCRB protein homolog; s 60.8 11 0.00037 32.1 5.0 64 176-245 23-89 (240)
442 3fs2_A 2-dehydro-3-deoxyphosph 60.3 78 0.0027 27.7 10.5 165 25-219 48-219 (298)
443 4e4f_A Mannonate dehydratase; 60.1 8.1 0.00028 35.5 4.4 87 141-239 217-308 (426)
444 3q45_A Mandelate racemase/muco 59.9 8 0.00027 34.6 4.2 92 137-240 169-265 (368)
445 1ep3_A Dihydroorotate dehydrog 59.6 9.7 0.00033 32.7 4.6 76 43-122 183-270 (311)
446 1o5k_A DHDPS, dihydrodipicolin 59.6 26 0.0009 30.5 7.5 170 43-242 40-222 (306)
447 3a5f_A Dihydrodipicolinate syn 59.3 38 0.0013 29.1 8.4 170 43-242 29-207 (291)
448 2pcq_A Putative dihydrodipicol 59.2 19 0.00064 31.0 6.4 66 175-242 21-97 (283)
449 1jub_A Dihydroorotate dehydrog 59.0 12 0.00043 32.2 5.2 77 43-121 179-270 (311)
450 3lab_A Putative KDPG (2-keto-3 58.8 30 0.001 29.0 7.3 63 173-238 25-90 (217)
451 2hmc_A AGR_L_411P, dihydrodipi 58.7 16 0.00054 32.6 5.9 58 184-242 58-127 (344)
452 1r0m_A N-acylamino acid racema 58.7 20 0.00068 31.9 6.6 87 139-239 177-268 (375)
453 1mxs_A KDPG aldolase; 2-keto-3 58.6 10 0.00035 31.7 4.4 65 173-241 38-106 (225)
454 3tji_A Mandelate racemase/muco 58.5 7.1 0.00024 35.8 3.7 88 140-239 210-302 (422)
455 3bjs_A Mandelate racemase/muco 58.1 12 0.0004 34.3 5.1 89 139-239 216-310 (428)
456 2ze3_A DFA0005; organic waste 57.9 6.3 0.00021 34.3 3.0 45 34-98 166-210 (275)
457 3eoo_A Methylisocitrate lyase; 57.4 14 0.00047 32.5 5.2 178 46-243 39-242 (298)
458 3tr2_A Orotidine 5'-phosphate 57.1 19 0.00063 30.5 5.8 60 177-245 148-221 (239)
459 3ist_A Glutamate racemase; str 56.9 11 0.00037 32.5 4.4 67 1-96 28-95 (269)
460 2ztj_A Homocitrate synthase; ( 56.7 95 0.0033 27.8 10.9 168 43-238 32-219 (382)
461 3tcs_A Racemase, putative; PSI 56.7 18 0.00061 32.7 6.0 86 142-239 189-279 (388)
462 4e38_A Keto-hydroxyglutarate-a 56.5 33 0.0011 28.9 7.3 64 173-240 46-113 (232)
463 3uhf_A Glutamate racemase; str 56.3 12 0.00042 32.3 4.6 27 29-56 66-92 (274)
464 2ps2_A Putative mandelate race 56.2 13 0.00046 33.0 5.1 39 202-240 227-269 (371)
465 4dxk_A Mandelate racemase / mu 56.0 14 0.00049 33.4 5.3 90 139-239 197-290 (400)
466 3lye_A Oxaloacetate acetyl hyd 56.0 3.8 0.00013 36.3 1.3 49 35-102 177-225 (307)
467 1vr6_A Phospho-2-dehydro-3-deo 55.7 1.1E+02 0.0039 27.2 11.6 188 16-245 107-315 (350)
468 2v9d_A YAGE; dihydrodipicolini 55.7 23 0.00079 31.5 6.5 170 43-242 59-241 (343)
469 4dwd_A Mandelate racemase/muco 55.5 13 0.00043 33.7 4.8 90 138-239 177-270 (393)
470 3t6c_A RSPA, putative MAND fam 55.5 11 0.00038 34.7 4.5 87 141-239 229-320 (440)
471 2bdq_A Copper homeostasis prot 55.5 18 0.0006 30.6 5.3 69 180-249 15-104 (224)
472 3ldv_A Orotidine 5'-phosphate 55.3 9 0.00031 32.9 3.6 61 176-245 165-239 (255)
473 2zc8_A N-acylamino acid racema 55.2 32 0.0011 30.4 7.4 87 139-239 170-261 (369)
474 2nx9_A Oxaloacetate decarboxyl 55.1 18 0.0006 33.8 5.8 66 43-121 165-232 (464)
475 3vk5_A MOEO5; TIM barrel, tran 54.9 13 0.00045 32.5 4.6 57 179-243 59-126 (286)
476 3eoo_A Methylisocitrate lyase; 54.4 4.7 0.00016 35.5 1.6 49 33-101 168-216 (298)
477 2nx9_A Oxaloacetate decarboxyl 54.0 59 0.002 30.2 9.2 167 43-237 37-230 (464)
478 4gbu_A NADPH dehydrogenase 1; 53.8 3.4 0.00012 37.7 0.7 42 207-248 311-356 (400)
479 1vcv_A Probable deoxyribose-ph 53.1 26 0.00088 29.5 6.0 87 139-233 101-204 (226)
480 1sfl_A 3-dehydroquinate dehydr 52.9 14 0.00047 31.2 4.3 43 45-98 26-68 (238)
481 2r91_A 2-keto-3-deoxy-(6-phosp 52.8 38 0.0013 29.1 7.2 57 184-242 30-99 (286)
482 3b8i_A PA4872 oxaloacetate dec 52.8 7 0.00024 34.2 2.5 41 36-96 168-208 (287)
483 1w3i_A EDA, 2-keto-3-deoxy glu 52.6 43 0.0015 28.8 7.6 57 184-242 31-100 (293)
484 3r0u_A Enzyme of enolase super 52.5 28 0.00095 31.3 6.6 91 138-240 172-269 (379)
485 1p1x_A Deoxyribose-phosphate a 52.1 29 0.001 29.7 6.3 58 175-233 152-218 (260)
486 3d0c_A Dihydrodipicolinate syn 52.1 24 0.00083 30.8 6.0 57 176-233 96-159 (314)
487 2oz8_A MLL7089 protein; struct 52.0 14 0.00047 33.3 4.4 90 139-240 177-273 (389)
488 2yw3_A 4-hydroxy-2-oxoglutarat 51.9 35 0.0012 27.8 6.6 64 173-241 25-91 (207)
489 3fcp_A L-Ala-D/L-Glu epimerase 51.6 23 0.00077 31.8 5.8 90 138-239 179-273 (381)
490 3dgb_A Muconate cycloisomerase 51.3 17 0.00058 32.6 4.9 91 138-240 180-275 (382)
491 3gr7_A NADPH dehydrogenase; fl 51.3 37 0.0013 30.0 7.1 90 43-151 236-326 (340)
492 2qdd_A Mandelate racemase/muco 51.2 19 0.00063 32.2 5.1 39 202-240 225-267 (378)
493 3ih1_A Methylisocitrate lyase; 51.1 4 0.00014 36.1 0.7 46 35-100 174-219 (305)
494 3g8r_A Probable spore coat pol 50.9 41 0.0014 30.2 7.3 79 149-232 75-154 (350)
495 3fa4_A 2,3-dimethylmalate lyas 50.6 4.6 0.00016 35.7 1.0 21 35-56 169-189 (302)
496 2e6f_A Dihydroorotate dehydrog 50.5 14 0.00049 31.9 4.2 76 42-121 180-272 (314)
497 4dpp_A DHDPS 2, dihydrodipicol 50.3 49 0.0017 29.7 7.8 60 43-110 87-146 (360)
498 3ivs_A Homocitrate synthase, m 50.1 57 0.0019 30.0 8.3 146 43-217 68-226 (423)
499 2jfz_A Glutamate racemase; cel 50.0 12 0.00041 31.6 3.5 27 29-56 42-68 (255)
500 2yr1_A 3-dehydroquinate dehydr 49.7 21 0.00072 30.4 5.0 57 29-99 29-85 (257)
No 1
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=100.00 E-value=4.8e-39 Score=282.78 Aligned_cols=198 Identities=15% Similarity=0.238 Sum_probs=167.2
Q ss_pred ecccccccCCCCCCCcchHHHHHHHHHhhCCCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHH----------
Q psy9039 13 HDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLC---------- 82 (251)
Q Consensus 13 ~~~p~~~~~pG~P~~~~~~~~i~~~a~~~a~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i---------- 82 (251)
-++||+|+ |||+.+.|.+.+ ++|+++|+ |.|| +|+|||||++|||+||+|..|.+
T Consensus 15 ali~yita--G~P~~~~t~~~~--------~~l~~~Ga-D~iE----lGiPfSDP~aDGpvIq~a~~rAL~~g~~~~~~~ 79 (252)
T 3tha_A 15 ANVAYTVL--GYPNLQTSEAFL--------QRLDQSPI-DILE----LGVAYSDPIADGEIIADAAKIALDQGVDIHSVF 79 (252)
T ss_dssp EEEEEEET--TSSCHHHHHHHH--------HTGGGSSC-SEEE----EECCCSCCCSCCCHHHHHHHHHHHTTCCHHHHH
T ss_pred CeEEEEeC--CCCCHHHHHHHH--------HHHHHcCC-CEEE----ECCCCCCCCCCcHHHHHHHHHHHHCCCCHHHHH
Confidence 58999999 999999999999 99999999 9997 59999999999999999999743
Q ss_pred HHHHHhCCCCccEEEEEeeCChHHHHHHHHHcCccceecccccccccCCCceeecC-----cchhHHHHHhcCCCcchhh
Q psy9039 83 AEIRKVLPPSVPVGVQILSGCNKAALATAQAAGLDFIRAESFVFGHMADEGLMNAQ-----AGPLLRYRKQIGADNVLVF 157 (251)
Q Consensus 83 ~~vr~~~~~~~P~Gvn~~~N~~~~~~~ia~a~g~~Fir~~~~~~~~~~~~Gli~~d-----a~e~~~~r~~l~~~~i~i~ 157 (251)
+.+++.... +|+.+|.|+|+ +.++|+ .+|++.+ ..+|.+|+|+|| ..++.+..+++|.+.|.++
T Consensus 80 ~~~~~~r~~-~Pivlm~Y~N~-i~~~G~-----e~F~~~~----~~aGvdG~IipDLP~eE~~~~~~~~~~~Gl~~I~lv 148 (252)
T 3tha_A 80 ELLARIKTK-KALVFMVYYNL-IFSYGL-----EKFVKKA----KSLGICALIVPELSFEESDDLIKECERYNIALITLV 148 (252)
T ss_dssp HHHHHCCCS-SEEEEECCHHH-HHHHCH-----HHHHHHH----HHTTEEEEECTTCCGGGCHHHHHHHHHTTCEECEEE
T ss_pred HHHHHHhcC-CCEEEEeccCH-HHHhhH-----HHHHHHH----HHcCCCEEEeCCCCHHHHHHHHHHHHHcCCeEEEEe
Confidence 334433222 59999999997 999999 5899975 667799999999 5566667777787766665
Q ss_pred hhhHhhccCCCCCCcccHHHHHHHhh-h-ccccEEEecCCCCCCCCCH-HHHHHHHhcCCCCEEEecCC-ChHhHHHhhc
Q psy9039 158 TDIKKKHSSHAITADVDITETAKAAS-F-FLSDGLIITGNATGDPADV-SQLMSVKNAVDLPILIGSGV-TSDNVEHYMT 233 (251)
Q Consensus 158 a~v~~k~~~~~~~~~~~i~~~a~~a~-~-~~~D~v~VTG~~~g~~~~~-~~l~~vr~~~~~PV~vG~GI-~~~~v~~~~~ 233 (251)
+ | +++++|++++++.+. | |+++..+|||.++....+. +.++++|+.+++||++|||| ++++++++.+
T Consensus 149 a--------P-~t~~eRi~~ia~~a~gFiY~Vs~~GvTG~~~~~~~~~~~~v~~vr~~~~~Pv~vGfGIst~e~a~~~~~ 219 (252)
T 3tha_A 149 S--------V-TTPKERVKKLVKHAKGFIYLLASIGITGTKSVEEAILQDKVKEIRSFTNLPIFVGFGIQNNQDVKRMRK 219 (252)
T ss_dssp E--------T-TSCHHHHHHHHTTCCSCEEEECCSCSSSCSHHHHHHHHHHHHHHHTTCCSCEEEESSCCSHHHHHHHTT
T ss_pred C--------C-CCcHHHHHHHHHhCCCeEEEEecCCCCCcccCCCHHHHHHHHHHHHhcCCcEEEEcCcCCHHHHHHHHh
Confidence 2 3 256789999998886 7 8899889999986554443 77999999999999999999 7999999998
Q ss_pred -CCEEEEeceEee
Q psy9039 234 -ADALIIGSHFKQ 245 (251)
Q Consensus 234 -ADGvIVGS~~~~ 245 (251)
||||||||+|++
T Consensus 220 ~ADGVIVGSAiVk 232 (252)
T 3tha_A 220 VADGVIVGTSIVK 232 (252)
T ss_dssp TSSEEEECHHHHH
T ss_pred cCCEEEECHHHHH
Confidence 999999999986
No 2
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=100.00 E-value=7e-38 Score=278.55 Aligned_cols=197 Identities=20% Similarity=0.311 Sum_probs=161.5
Q ss_pred ecccccccCCCCCCCcchHHHHHHHHHhhCCCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHH------------
Q psy9039 13 HDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTR------------ 80 (251)
Q Consensus 13 ~~~p~~~~~pG~P~~~~~~~~i~~~a~~~a~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~------------ 80 (251)
-++||+++ |||+++.+.+.+ ++|+++|+ |.|+ +|+|||||++|||+||+|+.|
T Consensus 21 ali~yi~a--GdP~~~~~~~~~--------~~l~~~Ga-D~iE----lGiPfSDP~aDGpvIq~a~~rAL~~G~~~~~~~ 85 (271)
T 3nav_A 21 AFVPFVTI--GDPNPEQSLAIM--------QTLIDAGA-DALE----LGMPFSDPLADGPTIQGANLRALAAKTTPDICF 85 (271)
T ss_dssp EEEEEEET--TSSCHHHHHHHH--------HHHHHTTC-SSEE----EECCCCCGGGCCSHHHHHHHHHHHTTCCHHHHH
T ss_pred eEEEEEeC--CCCCHHHHHHHH--------HHHHHcCC-CEEE----ECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHH
Confidence 48999999 999999999999 99999999 9997 599999999999999999885
Q ss_pred -HHHHHHHh-CCCCccEEEEEeeCChHHHHHHHHHcCccceecccccccccCCCceeecC-----cchhHHHHHhcCCCc
Q psy9039 81 -LCAEIRKV-LPPSVPVGVQILSGCNKAALATAQAAGLDFIRAESFVFGHMADEGLMNAQ-----AGPLLRYRKQIGADN 153 (251)
Q Consensus 81 -~i~~vr~~-~~~~~P~Gvn~~~N~~~~~~~ia~a~g~~Fir~~~~~~~~~~~~Gli~~d-----a~e~~~~r~~l~~~~ 153 (251)
+++++|+. .+ +|+++|.|+|+ ++++++ .+|++.+ ..+|.+|+|.|| ..++.++.++.|.+.
T Consensus 86 ~~v~~~r~~~~~--~Pivlm~Y~n~-v~~~g~-----~~f~~~~----~~aGvdGvIipDlp~ee~~~~~~~~~~~gl~~ 153 (271)
T 3nav_A 86 ELIAQIRARNPE--TPIGLLMYANL-VYARGI-----DDFYQRC----QKAGVDSVLIADVPTNESQPFVAAAEKFGIQP 153 (271)
T ss_dssp HHHHHHHHHCTT--SCEEEEECHHH-HHHTCH-----HHHHHHH----HHHTCCEEEETTSCGGGCHHHHHHHHHTTCEE
T ss_pred HHHHHHHhcCCC--CCEEEEecCcH-HHHHhH-----HHHHHHH----HHCCCCEEEECCCCHHHHHHHHHHHHHcCCeE
Confidence 66889887 56 79999999998 899998 4899975 567799999999 455667777777766
Q ss_pred chhhhhhHhhccCCCCCCcccHHHHHHHhh-h-ccccEEEecCCCCCCCCCH-HHHHHHHhcCCCCEEEecCC-ChHhHH
Q psy9039 154 VLVFTDIKKKHSSHAITADVDITETAKAAS-F-FLSDGLIITGNATGDPADV-SQLMSVKNAVDLPILIGSGV-TSDNVE 229 (251)
Q Consensus 154 i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~-~-~~~D~v~VTG~~~g~~~~~-~~l~~vr~~~~~PV~vG~GI-~~~~v~ 229 (251)
+.+++ | +++++|++++++.+. | |+++..++||.++..+.+. ++++++|+.+++||++|||| |+++++
T Consensus 154 I~lva--------p-~t~~eri~~i~~~~~gfiY~vs~~GvTG~~~~~~~~~~~~v~~vr~~~~~Pv~vGfGIst~e~~~ 224 (271)
T 3nav_A 154 IFIAP--------P-TASDETLRAVAQLGKGYTYLLSRAGVTGAETKANMPVHALLERLQQFDAPPALLGFGISEPAQVK 224 (271)
T ss_dssp EEEEC--------T-TCCHHHHHHHHHHCCSCEEECCCC--------CCHHHHHHHHHHHHTTCCCEEECSSCCSHHHHH
T ss_pred EEEEC--------C-CCCHHHHHHHHHHCCCeEEEEeccCCCCcccCCchhHHHHHHHHHHhcCCCEEEECCCCCHHHHH
Confidence 66652 3 256689999999886 7 8889999999987766554 77999999999999999999 699999
Q ss_pred H-hhc-CCEEEEeceEee
Q psy9039 230 H-YMT-ADALIIGSHFKQ 245 (251)
Q Consensus 230 ~-~~~-ADGvIVGS~~~~ 245 (251)
+ +.. ||||||||+|++
T Consensus 225 ~~~~~gADgvIVGSAiv~ 242 (271)
T 3nav_A 225 QAIEAGAAGAISGSAVVK 242 (271)
T ss_dssp HHHHTTCSEEEESHHHHH
T ss_pred HHHHcCCCEEEECHHHHH
Confidence 4 545 999999999975
No 3
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=100.00 E-value=1.7e-36 Score=269.22 Aligned_cols=197 Identities=16% Similarity=0.254 Sum_probs=162.3
Q ss_pred ecccccccCCCCCCCcchHHHHHHHHHhhCCCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHH-------------
Q psy9039 13 HDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMT------------- 79 (251)
Q Consensus 13 ~~~p~~~~~pG~P~~~~~~~~i~~~a~~~a~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~------------- 79 (251)
-++||+++ |||+++.+.+.+ ++|+++|+ |.|+ +|+|||||++|||+||++..
T Consensus 19 ali~yi~a--GdP~~~~~~~~~--------~~l~~~Ga-D~iE----lgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~~~ 83 (267)
T 3vnd_A 19 AFVPFVTI--GDPSPELSLKII--------QTLVDNGA-DALE----LGFPFSDPLADGPVIQGANLRSLAAGTTSSDCF 83 (267)
T ss_dssp EEEEEEET--TSSCHHHHHHHH--------HHHHHTTC-SSEE----EECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHH
T ss_pred eEEEEEeC--CCCCHHHHHHHH--------HHHHHcCC-CEEE----ECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHH
Confidence 47999999 999999999999 99999999 9997 59999999999999999885
Q ss_pred HHHHHHHHh-CCCCccEEEEEeeCChHHHHHHHHHcCccceecccccccccCCCceeecC-----cchhHHHHHhcCCCc
Q psy9039 80 RLCAEIRKV-LPPSVPVGVQILSGCNKAALATAQAAGLDFIRAESFVFGHMADEGLMNAQ-----AGPLLRYRKQIGADN 153 (251)
Q Consensus 80 ~~i~~vr~~-~~~~~P~Gvn~~~N~~~~~~~ia~a~g~~Fir~~~~~~~~~~~~Gli~~d-----a~e~~~~r~~l~~~~ 153 (251)
++++++|+. ++ +|+++|.|+|+ ++++++ .+|++.+ ..+|.+|++.+| ..++.++.++.|.+.
T Consensus 84 ~~v~~ir~~~~~--~Pivlm~Y~np-v~~~g~-----e~f~~~~----~~aGvdgvii~Dlp~ee~~~~~~~~~~~gl~~ 151 (267)
T 3vnd_A 84 DIITKVRAQHPD--MPIGLLLYANL-VFANGI-----DEFYTKA----QAAGVDSVLIADVPVEESAPFSKAAKAHGIAP 151 (267)
T ss_dssp HHHHHHHHHCTT--CCEEEEECHHH-HHHHCH-----HHHHHHH----HHHTCCEEEETTSCGGGCHHHHHHHHHTTCEE
T ss_pred HHHHHHHhcCCC--CCEEEEecCcH-HHHhhH-----HHHHHHH----HHcCCCEEEeCCCCHhhHHHHHHHHHHcCCeE
Confidence 467889987 66 79999999998 899998 4899975 567799999998 456666777777766
Q ss_pred chhhhhhHhhccCCCCCCcccHHHHHHHhh-h-ccccEEEecCCCCCCCCCH-HHHHHHHhcCCCCEEEecCC-ChHhHH
Q psy9039 154 VLVFTDIKKKHSSHAITADVDITETAKAAS-F-FLSDGLIITGNATGDPADV-SQLMSVKNAVDLPILIGSGV-TSDNVE 229 (251)
Q Consensus 154 i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~-~-~~~D~v~VTG~~~g~~~~~-~~l~~vr~~~~~PV~vG~GI-~~~~v~ 229 (251)
+.+++ | +++.+|++.+++.+. | |.++..++||.+++.+++. ++++++|+.+++||++|||| |+++++
T Consensus 152 i~lia--------P-~t~~eri~~i~~~~~gfvY~vS~~GvTG~~~~~~~~~~~~v~~vr~~~~~pv~vGfGI~~~e~~~ 222 (267)
T 3vnd_A 152 IFIAP--------P-NADADTLKMVSEQGEGYTYLLSRAGVTGTESKAGEPIENILTQLAEFNAPPPLLGFGIAEPEQVR 222 (267)
T ss_dssp ECEEC--------T-TCCHHHHHHHHHHCCSCEEESCCCCCC--------CHHHHHHHHHTTTCCCEEECSSCCSHHHHH
T ss_pred EEEEC--------C-CCCHHHHHHHHHhCCCcEEEEecCCCCCCccCCcHHHHHHHHHHHHhcCCCEEEECCcCCHHHHH
Confidence 66652 3 256689999999987 7 8889999999998776665 78999999999999999999 699999
Q ss_pred -Hhhc-CCEEEEeceEee
Q psy9039 230 -HYMT-ADALIIGSHFKQ 245 (251)
Q Consensus 230 -~~~~-ADGvIVGS~~~~ 245 (251)
.+.. |||+||||+|++
T Consensus 223 ~~~~~gADgvVVGSaiv~ 240 (267)
T 3vnd_A 223 AAIKAGAAGAISGSAVVK 240 (267)
T ss_dssp HHHHTTCSEEEECHHHHH
T ss_pred HHHHcCCCEEEECHHHHH
Confidence 4556 999999999975
No 4
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=100.00 E-value=2.3e-34 Score=256.13 Aligned_cols=196 Identities=19% Similarity=0.301 Sum_probs=146.9
Q ss_pred ecccccccCCCCCCCcchHHHHHHHHHhhCCCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHH-----------
Q psy9039 13 HDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRL----------- 81 (251)
Q Consensus 13 ~~~p~~~~~pG~P~~~~~~~~i~~~a~~~a~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~----------- 81 (251)
-++||+++ |||+++.+.+.+ ++|+++ + |+||| |+|||||++|||+||+++.+.
T Consensus 17 ~li~~i~~--GdP~~~~~~~~~--------~~l~~~-a-D~IEl----G~PfsdP~adGp~Iq~a~~~Al~~G~~~~~~~ 80 (271)
T 1ujp_A 17 ALIPYLTA--GFPSREGFLQAV--------EEVLPY-A-DLLEI----GLPYSDPLGDGPVIQRASELALRKGMSVQGAL 80 (271)
T ss_dssp EEEEEEET--TSSCHHHHHHHH--------HHHGGG-C-SSEEE----ECCCCC----CHHHHHHHHHHHHTTCCHHHHH
T ss_pred eEEEEecC--CCCChHHHHHHH--------HHHHhc-C-CEEEE----CCCCCCcccccHHHHHHHHHHHHcCCCHHHHH
Confidence 57999988 999999988888 889999 9 99975 999999999999999999986
Q ss_pred --HHHHHHhCCCCccEEEEEeeCChHHHHHHHHHcCccceecccccccccCCCceeecCc-----chhHHHHHhcCCCcc
Q psy9039 82 --CAEIRKVLPPSVPVGVQILSGCNKAALATAQAAGLDFIRAESFVFGHMADEGLMNAQA-----GPLLRYRKQIGADNV 154 (251)
Q Consensus 82 --i~~vr~~~~~~~P~Gvn~~~N~~~~~~~ia~a~g~~Fir~~~~~~~~~~~~Gli~~da-----~e~~~~r~~l~~~~i 154 (251)
++++|+..+ +|+++|.|+|+ +++++. .+|++.+ ...|.+|++.+|. .++.+..++.+.+.+
T Consensus 81 ~~v~~ir~~~~--~Pii~m~y~n~-v~~~g~-----~~f~~~~----~~aG~dGviv~Dl~~ee~~~~~~~~~~~gl~~i 148 (271)
T 1ujp_A 81 ELVREVRALTE--KPLFLMTYLNP-VLAWGP-----ERFFGLF----KQAGATGVILPDLPPDEDPGLVRLAQEIGLETV 148 (271)
T ss_dssp HHHHHHHHHCC--SCEEEECCHHH-HHHHCH-----HHHHHHH----HHHTCCEEECTTCCGGGCHHHHHHHHHHTCEEE
T ss_pred HHHHHHHhcCC--CCEEEEecCcH-HHHhhH-----HHHHHHH----HHcCCCEEEecCCCHHHHHHHHHHHHHcCCceE
Confidence 789998876 79999999995 888888 4898875 4556899999993 333334444444444
Q ss_pred hhhhhhHhhccCCCCCCcccHHHHHHHhh-h-ccccEEEecCCCCCCCCC-HHHHHHHHhcCCCCEEEecCC-ChHhHHH
Q psy9039 155 LVFTDIKKKHSSHAITADVDITETAKAAS-F-FLSDGLIITGNATGDPAD-VSQLMSVKNAVDLPILIGSGV-TSDNVEH 230 (251)
Q Consensus 155 ~i~a~v~~k~~~~~~~~~~~i~~~a~~a~-~-~~~D~v~VTG~~~g~~~~-~~~l~~vr~~~~~PV~vG~GI-~~~~v~~ 230 (251)
.+++ | +++.+|++++++.+. | |.++..++||.+++...+ .++++++|+.+++||++|||| |++++++
T Consensus 149 ~lia--------p-~s~~eri~~ia~~~~gfiy~vs~~G~TG~~~~~~~~~~~~v~~vr~~~~~Pv~vGfGI~t~e~a~~ 219 (271)
T 1ujp_A 149 FLLA--------P-TSTDARIATVVRHATGFVYAVSVTGVTGMRERLPEEVKDLVRRIKARTALPVAVGFGVSGKATAAQ 219 (271)
T ss_dssp CEEC--------T-TCCHHHHHHHHTTCCSCEEEECC------------CCHHHHHHHHTTCCSCEEEESCCCSHHHHHH
T ss_pred EEeC--------C-CCCHHHHHHHHHhCCCCEEEEecCcccCCCCCCCccHHHHHHHHHhhcCCCEEEEcCCCCHHHHHH
Confidence 4431 2 245678888888876 6 677888899998876655 478999999999999999999 5999999
Q ss_pred hhc-CCEEEEeceEeec
Q psy9039 231 YMT-ADALIIGSHFKQG 246 (251)
Q Consensus 231 ~~~-ADGvIVGS~~~~~ 246 (251)
+ . ||||||||+|++.
T Consensus 220 ~-~~ADgVIVGSAi~~~ 235 (271)
T 1ujp_A 220 A-AVADGVVVGSALVRA 235 (271)
T ss_dssp H-TTSSEEEECHHHHHH
T ss_pred h-cCCCEEEEChHHhcc
Confidence 9 9 9999999999875
No 5
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=99.97 E-value=1.1e-32 Score=244.05 Aligned_cols=198 Identities=16% Similarity=0.230 Sum_probs=152.3
Q ss_pred ecccccccCCCCCCCcchHHHHHHHHHhhCCCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHH-----------
Q psy9039 13 HDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRL----------- 81 (251)
Q Consensus 13 ~~~p~~~~~pG~P~~~~~~~~i~~~a~~~a~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~----------- 81 (251)
-++||+++ |||+++.+.+.+ ++|+++|+ |+|+| |+|||||++|||++|+++.+.
T Consensus 18 ~~i~~i~~--g~p~~~~~~~~~--------~~l~~~G~-D~IEl----G~P~sdP~adgp~i~~a~~~al~~G~~~~~~~ 82 (262)
T 2ekc_A 18 ALVSYLMV--GYPDYETSLKAF--------KEVLKNGT-DILEI----GFPFSDPVADGPTIQVAHEVALKNGIRFEDVL 82 (262)
T ss_dssp EEEEEEET--TSSCHHHHHHHH--------HHHHHTTC-SEEEE----ECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHH
T ss_pred eEEEEecC--CCCChHHHHHHH--------HHHHHcCC-CEEEE----CCCCCCcccccHHHHHHHHHHHHcCCCHHHHH
Confidence 47999988 999999888888 88999999 99975 999999999999999997775
Q ss_pred --HHHHHHhC-CCCccEEEEEeeCChHHHHHHHHHcCccceecccccccccCCCceeecCc-----chhHHHHHhcCCCc
Q psy9039 82 --CAEIRKVL-PPSVPVGVQILSGCNKAALATAQAAGLDFIRAESFVFGHMADEGLMNAQA-----GPLLRYRKQIGADN 153 (251)
Q Consensus 82 --i~~vr~~~-~~~~P~Gvn~~~N~~~~~~~ia~a~g~~Fir~~~~~~~~~~~~Gli~~da-----~e~~~~r~~l~~~~ 153 (251)
++++|+.+ + +|+++|.|+|+ ++++++ .+|++.+ ...|.+|++.+|. .++.+..++.+.+.
T Consensus 83 ~~v~~ir~~~~~--~Pi~~m~y~n~-v~~~g~-----~~f~~~~----~~aG~dgvii~dl~~ee~~~~~~~~~~~gl~~ 150 (262)
T 2ekc_A 83 ELSETLRKEFPD--IPFLLMTYYNP-IFRIGL-----EKFCRLS----REKGIDGFIVPDLPPEEAEELKAVMKKYVLSF 150 (262)
T ss_dssp HHHHHHHHHCTT--SCEEEECCHHH-HHHHCH-----HHHHHHH----HHTTCCEEECTTCCHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHhhcCC--CCEEEEecCcH-HHHhhH-----HHHHHHH----HHcCCCEEEECCCCHHHHHHHHHHHHHcCCcE
Confidence 88999988 5 69999999996 888888 4888875 4566899999983 23333444444433
Q ss_pred chhhhhhHhhccCCCCCCcccHHHHHHHhh-h-ccccEEEecCCCCCCC-CCH-HHHHHHHhcCCCCEEEecCC-ChHhH
Q psy9039 154 VLVFTDIKKKHSSHAITADVDITETAKAAS-F-FLSDGLIITGNATGDP-ADV-SQLMSVKNAVDLPILIGSGV-TSDNV 228 (251)
Q Consensus 154 i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~-~-~~~D~v~VTG~~~g~~-~~~-~~l~~vr~~~~~PV~vG~GI-~~~~v 228 (251)
+.++ .| .++++++.++++.+. | |.++..++||.+++.+ .+. +.++++|+.+++||++|||| |++++
T Consensus 151 i~l~--------~p-~t~~~rl~~ia~~a~gfiy~vs~~g~TG~~~~~~~~~~~~~v~~vr~~~~~pv~vG~GI~t~e~~ 221 (262)
T 2ekc_A 151 VPLG--------AP-TSTRKRIKLICEAADEMTYFVSVTGTTGAREKLPYERIKKKVEEYRELCDKPVVVGFGVSKKEHA 221 (262)
T ss_dssp CCEE--------CT-TCCHHHHHHHHHHCSSCEEEESSCC---------CHHHHHHHHHHHHHCCSCEEEESSCCSHHHH
T ss_pred EEEe--------CC-CCCHHHHHHHHHhCCCCEEEEecCCccCCCCCcCcccHHHHHHHHHhhcCCCEEEeCCCCCHHHH
Confidence 3332 12 245578889988887 5 5667778999987765 444 78999999999999999999 59999
Q ss_pred HHhhc-CCEEEEeceEeec
Q psy9039 229 EHYMT-ADALIIGSHFKQG 246 (251)
Q Consensus 229 ~~~~~-ADGvIVGS~~~~~ 246 (251)
+++.. |||+||||+|++.
T Consensus 222 ~~~~~gADgvIVGSai~~~ 240 (262)
T 2ekc_A 222 REIGSFADGVVVGSALVKL 240 (262)
T ss_dssp HHHHTTSSEEEECHHHHHH
T ss_pred HHHHcCCCEEEECHHHHhh
Confidence 99777 9999999999875
No 6
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=99.96 E-value=4.6e-30 Score=227.76 Aligned_cols=198 Identities=18% Similarity=0.245 Sum_probs=154.3
Q ss_pred ecccccccCCCCCCCcchHHHHHHHHHhhCCCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHH-----------
Q psy9039 13 HDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRL----------- 81 (251)
Q Consensus 13 ~~~p~~~~~pG~P~~~~~~~~i~~~a~~~a~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~----------- 81 (251)
-++||+++ |||+++.+.+.+ +.|+++|+ |+|++ |+||+||.+|||.+|+++.+.
T Consensus 18 ~~i~~i~~--gdp~~~~~~~~~--------~~l~~~Ga-D~iei----g~P~sdp~~DG~~i~~a~~~al~~G~~~~~~~ 82 (268)
T 1qop_A 18 AFVPFVTL--GDPGIEQSLKII--------DTLIDAGA-DALEL----GVPFSDPLADGPTIQNANLRAFAAGVTPAQCF 82 (268)
T ss_dssp EEEEEEET--TSSCHHHHHHHH--------HHHHHTTC-SSEEE----ECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHH
T ss_pred eEEEEeeC--CCCCHHHHHHHH--------HHHHHCCC-CEEEE----CCCCCCccCCCHHHHHHHHHHHHcCCCHHHHH
Confidence 47899988 999998887777 88999999 99975 999999999999999988765
Q ss_pred --HHHHHHh-CCCCccEEEEEeeCChHHHHHHHHHcCccceecccccccccCCCceeecCc-----chhHHHHHhcCCCc
Q psy9039 82 --CAEIRKV-LPPSVPVGVQILSGCNKAALATAQAAGLDFIRAESFVFGHMADEGLMNAQA-----GPLLRYRKQIGADN 153 (251)
Q Consensus 82 --i~~vr~~-~~~~~P~Gvn~~~N~~~~~~~ia~a~g~~Fir~~~~~~~~~~~~Gli~~da-----~e~~~~r~~l~~~~ 153 (251)
++++|+. ++ +|+++|.|+|+ +++++. .+|++.+ ..+|.+|++.+|. .++.+..++.+.+.
T Consensus 83 ~~v~~ir~~~~~--~Pv~lm~y~n~-v~~~g~-----~~~~~~~----~~aGadgii~~d~~~e~~~~~~~~~~~~g~~~ 150 (268)
T 1qop_A 83 EMLAIIREKHPT--IPIGLLMYANL-VFNNGI-----DAFYARC----EQVGVDSVLVADVPVEESAPFRQAALRHNIAP 150 (268)
T ss_dssp HHHHHHHHHCSS--SCEEEEECHHH-HHTTCH-----HHHHHHH----HHHTCCEEEETTCCGGGCHHHHHHHHHTTCEE
T ss_pred HHHHHHHhcCCC--CCEEEEEcccH-HHHhhH-----HHHHHHH----HHcCCCEEEEcCCCHHHHHHHHHHHHHcCCcE
Confidence 7899998 67 79999999996 777776 4787764 4456789999982 23344444444433
Q ss_pred chhhhhhHhhccCCCCCCcccHHHHHHHhh-h-ccccEEEecCCCCCCCCC-HHHHHHHHhcCCCCEEEecCCC-hHhHH
Q psy9039 154 VLVFTDIKKKHSSHAITADVDITETAKAAS-F-FLSDGLIITGNATGDPAD-VSQLMSVKNAVDLPILIGSGVT-SDNVE 229 (251)
Q Consensus 154 i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~-~-~~~D~v~VTG~~~g~~~~-~~~l~~vr~~~~~PV~vG~GI~-~~~v~ 229 (251)
+.++ .| .++.++++++++.+. | |.++..++||.++...++ .++++++|+.+++||++||||+ +++++
T Consensus 151 i~l~--------~p-~t~~~~i~~i~~~~~g~v~~~s~~G~tG~~~~~~~~~~~~i~~lr~~~~~pi~vggGI~t~e~~~ 221 (268)
T 1qop_A 151 IFIC--------PP-NADDDLLRQVASYGRGYTYLLSRSGVTGAENRGALPLHHLIEKLKEYHAAPALQGFGISSPEQVS 221 (268)
T ss_dssp ECEE--------CT-TCCHHHHHHHHHHCCSCEEEESSSSCCCSSSCC--CCHHHHHHHHHTTCCCEEEESSCCSHHHHH
T ss_pred EEEE--------CC-CCCHHHHHHHHhhCCCcEEEEecCCcCCCccCCCchHHHHHHHHHhccCCcEEEECCCCCHHHHH
Confidence 3332 12 245578888888877 5 555555789998776554 5899999999999999999995 99999
Q ss_pred H-hhc-CCEEEEeceEeec
Q psy9039 230 H-YMT-ADALIIGSHFKQG 246 (251)
Q Consensus 230 ~-~~~-ADGvIVGS~~~~~ 246 (251)
+ +.. |||+||||+|++.
T Consensus 222 ~~~~agAD~vVVGSai~~~ 240 (268)
T 1qop_A 222 AAVRAGAAGAISGSAIVKI 240 (268)
T ss_dssp HHHHTTCSEEEECHHHHHH
T ss_pred HHHHcCCCEEEEChHHhhh
Confidence 9 456 9999999999764
No 7
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=99.91 E-value=3.1e-25 Score=195.52 Aligned_cols=192 Identities=23% Similarity=0.292 Sum_probs=139.2
Q ss_pred ecccccccCCCCCCCcchHHHHHHHHHhhCCCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHH-----------
Q psy9039 13 HDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRL----------- 81 (251)
Q Consensus 13 ~~~p~~~~~pG~P~~~~~~~~i~~~a~~~a~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~----------- 81 (251)
-++||+++ |+|+.+.+.+.+ +.|+++|+ |.|++ |+||++|++|||.+|+++.+.
T Consensus 19 ~~~~~i~~--g~~~~~~~~~~~--------~~l~~~Ga-d~iel----g~p~~dp~~dg~~i~~a~~~al~~g~~~~~~~ 83 (262)
T 1rd5_A 19 AFIPYITA--GDPDLATTAEAL--------RLLDGCGA-DVIEL----GVPCSDPYIDGPIIQASVARALASGTTMDAVL 83 (262)
T ss_dssp EEEEEEET--TSSCHHHHHHHH--------HHHHHTTC-SSEEE----ECCCSCCTTSCHHHHHHHHHHHTTTCCHHHHH
T ss_pred eEEEEeeC--CCCCHHHHHHHH--------HHHHHcCC-CEEEE----CCCCCCcccCCHHHHHHHHHHHHcCCCHHHHH
Confidence 47899988 999886666666 88899999 99975 999999999999999888864
Q ss_pred --HHHHHHhCCCCccEEEEEeeCChHHHHHH--HHHcCccceecccccccccCCCceeecC-----cchhHHHHHhcCCC
Q psy9039 82 --CAEIRKVLPPSVPVGVQILSGCNKAALAT--AQAAGLDFIRAESFVFGHMADEGLMNAQ-----AGPLLRYRKQIGAD 152 (251)
Q Consensus 82 --i~~vr~~~~~~~P~Gvn~~~N~~~~~~~i--a~a~g~~Fir~~~~~~~~~~~~Gli~~d-----a~e~~~~r~~l~~~ 152 (251)
++++|+.++ +|+.+|.|+|+ ...+++ +.+ +|.+|++.+| ..++.+..++.|.+
T Consensus 84 ~~i~~ir~~~~--~Pv~~m~~~~~-~~~~~~~~a~~---------------aGadgv~v~d~~~~~~~~~~~~~~~~g~~ 145 (262)
T 1rd5_A 84 EMLREVTPELS--CPVVLLSYYKP-IMFRSLAKMKE---------------AGVHGLIVPDLPYVAAHSLWSEAKNNNLE 145 (262)
T ss_dssp HHHHHHGGGCS--SCEEEECCSHH-HHSCCTHHHHH---------------TTCCEEECTTCBTTTHHHHHHHHHHTTCE
T ss_pred HHHHHHHhcCC--CCEEEEecCcH-HHHHHHHHHHH---------------cCCCEEEEcCCChhhHHHHHHHHHHcCCc
Confidence 688888877 79999998885 443333 223 3445666665 23444555555554
Q ss_pred cchhhhhhHhhccCCCCCCcccHHHHHHHhh-h-ccccEEEecCCCCCCCCC-HHHHHHHHhcCCCCEEEecCCC-hHhH
Q psy9039 153 NVLVFTDIKKKHSSHAITADVDITETAKAAS-F-FLSDGLIITGNATGDPAD-VSQLMSVKNAVDLPILIGSGVT-SDNV 228 (251)
Q Consensus 153 ~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~-~-~~~D~v~VTG~~~g~~~~-~~~l~~vr~~~~~PV~vG~GI~-~~~v 228 (251)
.+.+++ | .++.++++.++..+. | |..+..++||.+++..+. .++++++|+.+++||++||||+ ++|+
T Consensus 146 ~i~~~a--------~-~t~~e~~~~~~~~~~g~v~~~s~~G~tG~~~~~~~~~~~~i~~v~~~~~~pI~vgGGI~~~e~~ 216 (262)
T 1rd5_A 146 LVLLTT--------P-AIPEDRMKEITKASEGFVYLVSVNGVTGPRANVNPRVESLIQEVKKVTNKPVAVGFGISKPEHV 216 (262)
T ss_dssp ECEEEC--------T-TSCHHHHHHHHHHCCSCEEEECSSCCBCTTSCBCTHHHHHHHHHHHHCSSCEEEESCCCSHHHH
T ss_pred eEEEEC--------C-CCCHHHHHHHHhcCCCeEEEecCCCCCCCCcCCCchHHHHHHHHHhhcCCeEEEECCcCCHHHH
Confidence 333331 2 134456666655554 4 233334568877665443 4689999999999999999996 9999
Q ss_pred HHhhc--CCEEEEeceEeec
Q psy9039 229 EHYMT--ADALIIGSHFKQG 246 (251)
Q Consensus 229 ~~~~~--ADGvIVGS~~~~~ 246 (251)
.+++. |||++|||+|++.
T Consensus 217 ~~~~~~GAdgvvVGSai~~~ 236 (262)
T 1rd5_A 217 KQIAQWGADGVIIGSAMVRQ 236 (262)
T ss_dssp HHHHHTTCSEEEECHHHHHH
T ss_pred HHHHHcCCCEEEEChHHHhH
Confidence 99986 9999999998763
No 8
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=99.84 E-value=8.8e-22 Score=171.40 Aligned_cols=196 Identities=19% Similarity=0.245 Sum_probs=132.0
Q ss_pred ecccccccCCCCCCCcchHHHHHHHHHhhCCCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHH-------------
Q psy9039 13 HDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMT------------- 79 (251)
Q Consensus 13 ~~~p~~~~~pG~P~~~~~~~~i~~~a~~~a~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~------------- 79 (251)
.++||+++ |||+.+.+.+.+ +.++++ + |.|+ +++|||+|..||+.+++++.
T Consensus 6 ~~~~~i~~--~~~~~~~~~~~a--------~~~~~~-a-d~ie----l~~p~sdp~~DG~~~~~~~~~al~~g~~~~~~~ 69 (248)
T 1geq_A 6 SLIPYLTA--GDPDKQSTLNFL--------LALDEY-A-GAIE----LGIPFSDPIADGKTIQESHYRALKNGFKLREAF 69 (248)
T ss_dssp EEEEEEET--TSSCHHHHHHHH--------HHHGGG-B-SCEE----EECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHH
T ss_pred cEEEEEeC--CCCCHHHHHHHH--------HHHHHc-C-CEEE----ECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHH
Confidence 36899999 999887666766 778888 9 9997 59999999999999997764
Q ss_pred HHHHHHHHhCCCCccEEEEEeeCChH------HHHHHHHHcCccceecccccccccCCCceeecCcchhHHHHHhcCCCc
Q psy9039 80 RLCAEIRKVLPPSVPVGVQILSGCNK------AALATAQAAGLDFIRAESFVFGHMADEGLMNAQAGPLLRYRKQIGADN 153 (251)
Q Consensus 80 ~~i~~vr~~~~~~~P~Gvn~~~N~~~------~~~~ia~a~g~~Fir~~~~~~~~~~~~Gli~~da~e~~~~r~~l~~~~ 153 (251)
.+++++|+.++ +|+.++.|.|+ + .....+...|++++.... +-..+..++.++.++++...
T Consensus 70 ~~i~~i~~~~~--~pv~~~~~~~~-~~~~~~~~~~~~~~~~Gad~v~~~~----------~~~~~~~~~~~~~~~~g~~~ 136 (248)
T 1geq_A 70 WIVKEFRRHSS--TPIVLMTYYNP-IYRAGVRNFLAEAKASGVDGILVVD----------LPVFHAKEFTEIAREEGIKT 136 (248)
T ss_dssp HHHHHHHTTCC--CCEEEEECHHH-HHHHCHHHHHHHHHHHTCCEEEETT----------CCGGGHHHHHHHHHHHTCEE
T ss_pred HHHHHHHhhCC--CCEEEEeccch-hhhcCHHHHHHHHHHCCCCEEEECC----------CChhhHHHHHHHHHHhCCCe
Confidence 47899998887 79999998775 3 334455556666666421 01123456777777777533
Q ss_pred chhhhhhHhhccCCCCCCcccHHHHHHHhh-h-ccccEEEecCCCCCCCC-CHHHHHHHHhcCCCCEEEecCCCh-HhHH
Q psy9039 154 VLVFTDIKKKHSSHAITADVDITETAKAAS-F-FLSDGLIITGNATGDPA-DVSQLMSVKNAVDLPILIGSGVTS-DNVE 229 (251)
Q Consensus 154 i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~-~-~~~D~v~VTG~~~g~~~-~~~~l~~vr~~~~~PV~vG~GI~~-~~v~ 229 (251)
+..+ . + .++.+.++.+...+. + +..+.-+.||.+++..+ ..+.++++|+.+++||++||||+. +|+.
T Consensus 137 ~~~i---~-----~-~t~~e~~~~~~~~~d~~i~~~~~~G~~g~~~~~~~~~~~~i~~l~~~~~~pi~~~GGI~~~e~i~ 207 (248)
T 1geq_A 137 VFLA---A-----P-NTPDERLKVIDDMTTGFVYLVSLYGTTGAREEIPKTAYDLLRRAKRICRNKVAVGFGVSKREHVV 207 (248)
T ss_dssp EEEE---C-----T-TCCHHHHHHHHHHCSSEEEEECCC-------CCCHHHHHHHHHHHHHCSSCEEEESCCCSHHHHH
T ss_pred EEEE---C-----C-CCHHHHHHHHHhcCCCeEEEEECCccCCCCCCCChhHHHHHHHHHhhcCCCEEEEeecCCHHHHH
Confidence 3322 1 1 133344444433332 2 22222334555544333 257899999988999999999964 9999
Q ss_pred Hhhc--CCEEEEeceEeec
Q psy9039 230 HYMT--ADALIIGSHFKQG 246 (251)
Q Consensus 230 ~~~~--ADGvIVGS~~~~~ 246 (251)
+++. |||++|||+|.+.
T Consensus 208 ~~~~~Gad~vivGsai~~~ 226 (248)
T 1geq_A 208 SLLKEGANGVVVGSALVKI 226 (248)
T ss_dssp HHHHTTCSEEEECHHHHHH
T ss_pred HHHHcCCCEEEEcHHHHhh
Confidence 9975 9999999998753
No 9
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=99.77 E-value=6.2e-19 Score=153.34 Aligned_cols=180 Identities=12% Similarity=0.166 Sum_probs=128.5
Q ss_pred cccccccCCCCCCCcchHHHHHHHHHhhCCCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCc
Q psy9039 14 DVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSV 93 (251)
Q Consensus 14 ~~p~~~~~pG~P~~~~~~~~i~~~a~~~a~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~ 93 (251)
.--|+++ |||+.+.|.+.+ ++|+++|+ |+|+| |. |. .++...+-.+++++|+ ++ +
T Consensus 8 ~~~~it~--gDP~~~~t~~~~--------~~l~~~Ga-D~Iel----G~--S~-----g~t~~~~~~~v~~ir~-~~--~ 62 (234)
T 2f6u_A 8 KWRHITK--LDPDRTNTDEII--------KAVADSGT-DAVMI----SG--TQ-----NVTYEKARTLIEKVSQ-YG--L 62 (234)
T ss_dssp GCCEEEE--ECTTSCCCHHHH--------HHHHTTTC-SEEEE----CC--CT-----TCCHHHHHHHHHHHTT-SC--C
T ss_pred cceEEEe--eCCCccccHHHH--------HHHHHcCC-CEEEE----CC--CC-----CCCHHHHHHHHHHhcC-CC--C
Confidence 3457888 999999999988 88899999 99986 55 43 2456667788899998 66 7
Q ss_pred cEEEEEeeCChHHHHHHHHHcCccceecccccccccCCCceeecC-----cchhH-----HHH-------HhcC-----C
Q psy9039 94 PVGVQILSGCNKAALATAQAAGLDFIRAESFVFGHMADEGLMNAQ-----AGPLL-----RYR-------KQIG-----A 151 (251)
Q Consensus 94 P~Gvn~~~N~~~~~~~ia~a~g~~Fir~~~~~~~~~~~~Gli~~d-----a~e~~-----~~r-------~~l~-----~ 151 (251)
|+.+|.|+|.++ ..+.+|++.|| ..++. +.. ++.+ .
T Consensus 63 Pivl~~y~~n~i----------------------~~gvDg~iipdLp~ee~~~~~~g~~~~~~~~~~~~~~~~g~~~~~l 120 (234)
T 2f6u_A 63 PIVVEPSDPSNV----------------------VYDVDYLFVPTVLNSADGDWITGKHAQWVRMHYENLQKFTEIIESE 120 (234)
T ss_dssp CEEECCSSCCCC----------------------CCCSSEEEEEEETTBSBGGGTTHHHHHHHHTTGGGHHHHHHHHHST
T ss_pred CEEEecCCcchh----------------------hcCCCEEEEcccCCCCCHHHHhhhHHHHHHhhhhhHHHcCCcccce
Confidence 999999995312 24688999998 44444 333 4455 4
Q ss_pred Ccch----hhh----hhHhhccCCCCCCcccHHHHHHHhh-hc---cccEEEecCCCCCCCCCHHHHHHHHhcC-CCCEE
Q psy9039 152 DNVL----VFT----DIKKKHSSHAITADVDITETAKAAS-FF---LSDGLIITGNATGDPADVSQLMSVKNAV-DLPIL 218 (251)
Q Consensus 152 ~~i~----i~a----~v~~k~~~~~~~~~~~i~~~a~~a~-~~---~~D~v~VTG~~~g~~~~~~~l~~vr~~~-~~PV~ 218 (251)
+.|. +++ .++...+-+. ++++++..+++.+. +. .++... +| .....+.++++|+.+ ++|++
T Consensus 121 ~~I~~gYil~~P~~~~~rl~~g~~~-~~~e~~~~~a~~g~~~l~~~~Vyl~~-~G----~~~~~~~i~~i~~~~~~~Pv~ 194 (234)
T 2f6u_A 121 FIQIEGYIVLNPDSAVARVTKALCN-IDKELAASYALVGEKLFNLPIIYIEY-SG----TYGNPELVAEVKKVLDKARLF 194 (234)
T ss_dssp TEEEEEEEECCTTSHHHHHTTBCCC-CCHHHHHHHHHHHHHTTCCSEEEEEC-TT----SCCCHHHHHHHHHHCSSSEEE
T ss_pred eeeecceEEECCCCceEEeecCCCC-CCHHHHHHHHHhhhhhcCCCEEEEeC-CC----CcchHHHHHHHHHhCCCCCEE
Confidence 5555 221 0111112222 34466777777775 33 255444 54 355689999999999 99999
Q ss_pred EecCC-ChHhHHHhhc-CCEEEEeceEeec
Q psy9039 219 IGSGV-TSDNVEHYMT-ADALIIGSHFKQG 246 (251)
Q Consensus 219 vG~GI-~~~~v~~~~~-ADGvIVGS~~~~~ 246 (251)
+|||| |+++++++++ ||+|||||+++++
T Consensus 195 vGgGI~s~e~a~~~~~gAd~VIVGSa~v~~ 224 (234)
T 2f6u_A 195 YGGGIDSREKAREMLRYADTIIVGNVIYEK 224 (234)
T ss_dssp EESCCCSHHHHHHHHHHSSEEEECHHHHHH
T ss_pred EEecCCCHHHHHHHHhCCCEEEEChHHHhC
Confidence 99999 6999999998 9999999999875
No 10
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=99.76 E-value=2e-18 Score=150.76 Aligned_cols=182 Identities=15% Similarity=0.182 Sum_probs=126.1
Q ss_pred ecccccccCCCCCCCcchHHHHHHHHHhhCCCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCC
Q psy9039 13 HDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPS 92 (251)
Q Consensus 13 ~~~p~~~~~pG~P~~~~~~~~i~~~a~~~a~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~ 92 (251)
..--|+++ |||+.+.|.+.+ ++|+++|+ |+|++ |. |. | ++...+-..++++|+ ++
T Consensus 7 ~~~~~i~~--gDP~~~~t~~~~--------~~l~~~Ga-D~iel----G~--S~----G-vt~~~~~~~v~~ir~-~~-- 61 (240)
T 1viz_A 7 TEWKHVFK--LDPNKDLPDEQL--------EILCESGT-DAVII----GG--SD----G-VTEDNVLRMMSKVRR-FL-- 61 (240)
T ss_dssp GGCCEEEE--ECTTSCCCHHHH--------HHHHTSCC-SEEEE----CC-----------CHHHHHHHHHHHTT-SS--
T ss_pred CcceEEEe--eCCCccccHHHH--------HHHHHcCC-CEEEE----CC--CC----C-CCHHHHHHHHHHhhC-cC--
Confidence 34458888 999999999988 88999999 99986 55 32 3 445557778899998 66
Q ss_pred ccEEEEEeeCChHHHHHHHHHcCccceecccccccccCCCceeecC-----cchh-----HHHHHhcC-----CCcch--
Q psy9039 93 VPVGVQILSGCNKAALATAQAAGLDFIRAESFVFGHMADEGLMNAQ-----AGPL-----LRYRKQIG-----ADNVL-- 155 (251)
Q Consensus 93 ~P~Gvn~~~N~~~~~~~ia~a~g~~Fir~~~~~~~~~~~~Gli~~d-----a~e~-----~~~r~~l~-----~~~i~-- 155 (251)
+|+.+|.|+|.+ | ..+.+|+|+|| ..++ ....++++ .+.+.
T Consensus 62 ~Pivlm~y~~n~-------------i---------~~G~dg~iiPdLp~ee~~~~~~g~~~~a~~~~g~~~~~l~~i~~g 119 (240)
T 1viz_A 62 VPCVLEVSAIEA-------------I---------VPGFDLYFIPSVLNSKNADWIVGMHQKAMKEYGELMSMEEIVAEG 119 (240)
T ss_dssp SCEEEECSCGGG-------------C---------CSCCSEEEEEEETTBSSGGGTTHHHHHHHHHCHHHHHHSCEEEEE
T ss_pred CCEEEecCcccc-------------c---------cCCCCEEEEcccCcccChhhhcchhHHHHHHcCCCCcceeeeecc
Confidence 799999999531 2 24688999998 3444 46667766 55555
Q ss_pred --hhhh---h-HhhccCCCCCCcccHHHHHHHhhh---ccccEEEecCCCCCCCCCHHHHHHHHhcC-CCCEEEecCC-C
Q psy9039 156 --VFTD---I-KKKHSSHAITADVDITETAKAASF---FLSDGLIITGNATGDPADVSQLMSVKNAV-DLPILIGSGV-T 224 (251)
Q Consensus 156 --i~a~---v-~~k~~~~~~~~~~~i~~~a~~a~~---~~~D~v~VTG~~~g~~~~~~~l~~vr~~~-~~PV~vG~GI-~ 224 (251)
+++- + ....+-. .++++++...++.+++ ..++... +|. ....++++++|+.+ ++|+++|||| |
T Consensus 120 y~l~~P~~~~~rl~~~d~-~~~~~~~~~~a~~g~~~~~~~VYl~s-~G~----~~~~~~i~~i~~~~~~~Pv~vGgGI~t 193 (240)
T 1viz_A 120 YCIANPDCKAAALTEADA-DLNMDDIVAYARVSELLQLPIFYLEY-SGV----LGDIEAVKKTKAVLETSTLFYGGGIKD 193 (240)
T ss_dssp EEECCTTSHHHHHTTBCC-CCCHHHHHHHHHHHHHTTCSEEEEEC-TTS----CCCHHHHHHHHHTCSSSEEEEESSCCS
T ss_pred cEEECCCCceEEeeccCC-CCCHHHHHHHHHhCcccCCCEEEEeC-CCc----cChHHHHHHHHHhcCCCCEEEEeccCC
Confidence 3310 0 0000000 0123456666655531 2344443 443 55789999999999 9999999999 6
Q ss_pred hHhHHHhhc-CCEEEEeceEeecC
Q psy9039 225 SDNVEHYMT-ADALIIGSHFKQGG 247 (251)
Q Consensus 225 ~~~v~~~~~-ADGvIVGS~~~~~g 247 (251)
+++++++++ ||+|||||+++++-
T Consensus 194 ~e~a~~~~~gAd~VIVGSa~v~~~ 217 (240)
T 1viz_A 194 AETAKQYAEHADVIVVGNAVYEDF 217 (240)
T ss_dssp HHHHHHHHTTCSEEEECTHHHHCH
T ss_pred HHHHHHHHhCCCEEEEChHHHhCH
Confidence 999999998 99999999998763
No 11
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=99.59 E-value=4.8e-15 Score=128.64 Aligned_cols=179 Identities=16% Similarity=0.261 Sum_probs=117.2
Q ss_pred cccccCCCCCCCcchHHHHHHHHHhhCCCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccE
Q psy9039 16 PYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPV 95 (251)
Q Consensus 16 p~~~~~pG~P~~~~~~~~i~~~a~~~a~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~ 95 (251)
-|++. +||+...+.+.+ +++.++|. |+|+| + . |+. ++.+.+.++++++|+ ++ +|+
T Consensus 13 ~h~~~--~DPdk~~~~~~l--------~~~~~~Gt-DaI~v---G-g--s~g-----vt~~~~~~~v~~ik~-~~--~Pi 67 (235)
T 3w01_A 13 RHIFK--LDPAKHISDDDL--------DAICMSQT-DAIMI---G-G--TDD-----VTEDNVIHLMSKIRR-YP--LPL 67 (235)
T ss_dssp CEEEE--ECTTSCCCHHHH--------HHHHTSSC-SEEEE---C-C--SSC-----CCHHHHHHHHHHHTT-SC--SCE
T ss_pred eEEEe--ECCCCcCCHHHH--------HHHHHcCC-CEEEE---C-C--cCC-----cCHHHHHHHHHHhcC-cC--CCE
Confidence 45666 899998888777 34679999 99987 3 3 322 366778899999998 77 799
Q ss_pred EEEEeeCChHHHHHHHHHcCccceecccccccccCCCceeecC-----cchh-----HHHHHhcCC-----Ccch----h
Q psy9039 96 GVQILSGCNKAALATAQAAGLDFIRAESFVFGHMADEGLMNAQ-----AGPL-----LRYRKQIGA-----DNVL----V 156 (251)
Q Consensus 96 Gvn~~~N~~~~~~~ia~a~g~~Fir~~~~~~~~~~~~Gli~~d-----a~e~-----~~~r~~l~~-----~~i~----i 156 (251)
.++.| |+ ..|.+ +.+|++.|+ ..++ .+..+++|. +.+. +
T Consensus 68 il~p~-~~------------~~~~~---------gaD~il~pslln~~~~~~i~g~~~~a~~~~gl~~~~~e~i~~gYiv 125 (235)
T 3w01_A 68 VLEIS-NI------------ESVMP---------GFDFYFVPTVLNSTDVAFHNGTLLEALKTYGHSIDFEEVIFEGYVV 125 (235)
T ss_dssp EEECC-CS------------TTCCT---------TCSEEEEEEETTBSSGGGTTHHHHHHHHHHGGGCCGGGEEEEEEEE
T ss_pred EEecC-CH------------HHhhc---------CCCEEEEccccCCCCcchhhhHHHHHHHHcCCCCcccceeeeeEEE
Confidence 99988 54 23422 366777665 3333 234556665 4444 2
Q ss_pred hh---hhHhhccCCCCCCcccHHHHHHHh---h-hccccEEEecCCCCCCCCCHHHHHHHHhcC-CCCEEEecCC-ChHh
Q psy9039 157 FT---DIKKKHSSHAITADVDITETAKAA---S-FFLSDGLIITGNATGDPADVSQLMSVKNAV-DLPILIGSGV-TSDN 227 (251)
Q Consensus 157 ~a---~v~~k~~~~~~~~~~~i~~~a~~a---~-~~~~D~v~VTG~~~g~~~~~~~l~~vr~~~-~~PV~vG~GI-~~~~ 227 (251)
+. .+..-.+.. ...++++++..| . +++-..+-+-. +|...+.+.++++|+.+ ++|+++|||| ++++
T Consensus 126 v~p~s~v~~v~~a~---~~~~~e~iaa~A~~a~~~~g~~~vY~e~--sG~~g~~~~v~~ir~~~~~~pv~vGfGI~~~e~ 200 (235)
T 3w01_A 126 CNADSKVAKHTKAN---TDLTTEDLEAYAQMVNHMYRLPVMYIEY--SGIYGDVSKVQAVSEHLTETQLFYGGGISSEQQ 200 (235)
T ss_dssp CCSSSHHHHHTTBC---CCCCHHHHHHHHHHHHHTTCCSEEEEEC--TTSCCCHHHHHHHHTTCSSSEEEEESCCCSHHH
T ss_pred ECCCCChhhcccCC---cCCCHHHHHHHHHHHHHHcCCCEEEEec--CCCcCCHHHHHHHHHhcCCCCEEEECCcCCHHH
Confidence 21 000000111 112466666553 2 33333332211 12233689999999999 9999999999 7999
Q ss_pred HHHhhc-CCEEEEeceEeec
Q psy9039 228 VEHYMT-ADALIIGSHFKQG 246 (251)
Q Consensus 228 v~~~~~-ADGvIVGS~~~~~ 246 (251)
++++.. |||+||||+|.+|
T Consensus 201 a~~~~~gAD~VVVGSai~~~ 220 (235)
T 3w01_A 201 ATEMAAIADTIIVGDIIYKD 220 (235)
T ss_dssp HHHHHTTSSEEEECTHHHHC
T ss_pred HHHHHcCCCEEEECCceecC
Confidence 999998 9999999999886
No 12
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=99.57 E-value=5.6e-15 Score=127.83 Aligned_cols=182 Identities=15% Similarity=0.218 Sum_probs=115.9
Q ss_pred cccccCCCCCCCcchHHHHHHHHHhhCCCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccE
Q psy9039 16 PYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPV 95 (251)
Q Consensus 16 p~~~~~pG~P~~~~~~~~i~~~a~~~a~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~ 95 (251)
-|++. +||+...+.+.+ +++.++|. |+|+| +| |+. ++...+.++++++|+ ++ +|+
T Consensus 8 ~h~~~--iDPdk~~~~~~~--------~~~~~~Gt-D~i~v---GG---s~g-----vt~~~~~~~v~~ik~-~~--~Pv 62 (228)
T 3vzx_A 8 KHVFK--LDPNKDLPDEQL--------EILCESGT-DAVII---GG---SDG-----VTEDNVLRMMSKVRR-FL--VPC 62 (228)
T ss_dssp CEEEE--ECTTSCCCTTHH--------HHHHTSSC-SEEEE---CC---CSC-----CCHHHHHHHHHHHTT-SS--SCE
T ss_pred eEEEe--ECCCCCCCHHHH--------HHHHHcCC-CEEEE---CC---cCC-----CCHHHHHHHHHHhhc-cC--CCE
Confidence 45667 899998765555 33579999 99997 33 332 245678889999998 77 799
Q ss_pred EEEEeeCChHHHHHHHHHcCccceecccccccccCCCceeecC-----cchhH-----HHHHhcCC-----Ccch----h
Q psy9039 96 GVQILSGCNKAALATAQAAGLDFIRAESFVFGHMADEGLMNAQ-----AGPLL-----RYRKQIGA-----DNVL----V 156 (251)
Q Consensus 96 Gvn~~~N~~~~~~~ia~a~g~~Fir~~~~~~~~~~~~Gli~~d-----a~e~~-----~~r~~l~~-----~~i~----i 156 (251)
.++.+.+. .|. .+.+|++.|+ ..+++ +..+++|. +-+. +
T Consensus 63 vlfp~~~~-------------~v~---------~gaD~~l~pslln~~~~~~i~g~~~~a~~~~g~~~~~~e~i~~gYiv 120 (228)
T 3vzx_A 63 VLEVSAIE-------------AIV---------PGFDLYFIPSVLNSKNADWIVGMHQKAMKEYGELMSMEEIVAEGYCI 120 (228)
T ss_dssp EEECSCGG-------------GCC---------SCCSEEEEEEETTBSSGGGTTHHHHHHHHHHHHHHHHSCEEEEEEEE
T ss_pred EEeCCCHH-------------Hcc---------ccCCEEEEeeecCCCCcchhhhHHHHHHHHcCCCCcccceeeeEEEE
Confidence 99987642 232 1355555554 33443 44455553 3333 1
Q ss_pred hh---hhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCCCCCCCCHHHHHHHHhcC-CCCEEEecCC-ChHhHHHh
Q psy9039 157 FT---DIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNATGDPADVSQLMSVKNAV-DLPILIGSGV-TSDNVEHY 231 (251)
Q Consensus 157 ~a---~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~g~~~~~~~l~~vr~~~-~~PV~vG~GI-~~~~v~~~ 231 (251)
+. .+..-.+.....+.+++...|..+++++...+-+-+ +|...+.+.++++|+.+ ++||++|||| |+++++++
T Consensus 121 v~p~s~~~~~~~a~~~~~~e~~~~~a~~a~~~g~~~VYld~--sG~~~~~~~i~~i~~~~~~~Pv~vGGGI~t~e~a~~~ 198 (228)
T 3vzx_A 121 ANPDCKAAALTEADADLNMDDIVAYARVSELLQLPIFYLEY--SGVLGDIEAVKKTKAVLETSTLFYGGGIKDAETAKQY 198 (228)
T ss_dssp CCSSSHHHHHTTBCCCCCHHHHHHHHHHHHHTTCSEEEEEC--TTSCCCHHHHHHHHHHCSSSEEEEESSCCSHHHHHHH
T ss_pred ECCCCcceeeecccCCCCHHHHHHHHHHHHHcCCCEEEecC--CCCcCCHHHHHHHHHhcCCCCEEEeCCCCCHHHHHHH
Confidence 21 011000111111234555555666644444443333 12233689999999999 8999999999 79999999
Q ss_pred hc-CCEEEEeceEeec
Q psy9039 232 MT-ADALIIGSHFKQG 246 (251)
Q Consensus 232 ~~-ADGvIVGS~~~~~ 246 (251)
+. ||++||||++.++
T Consensus 199 ~~gAD~VVVGSa~v~~ 214 (228)
T 3vzx_A 199 AEHADVIVVGNAVYED 214 (228)
T ss_dssp HTTCSEEEECTHHHHC
T ss_pred HhCCCEEEEChHHhcC
Confidence 98 9999999999876
No 13
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=99.44 E-value=3.3e-14 Score=123.08 Aligned_cols=190 Identities=16% Similarity=0.174 Sum_probs=118.2
Q ss_pred eecccccccCCCCCCCcchHHHHHHHHHhhCCCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCC
Q psy9039 12 MHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPP 91 (251)
Q Consensus 12 ~~~~p~~~~~pG~P~~~~~~~~i~~~a~~~a~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~ 91 (251)
|...||+.+ +| +....+.+ +.+.++|+ |.+.+--+ |-+|......|+ .+++++|+.++
T Consensus 5 ~~i~psila--~D--~~~l~~~i--------~~~~~~Ga-d~ihldi~-DG~fvp~~~~g~-------~~v~~lr~~~~- 62 (230)
T 1tqj_A 5 IVVAPSILS--AD--FSRLGEEI--------KAVDEAGA-DWIHVDVM-DGRFVPNITIGP-------LIVDAIRPLTK- 62 (230)
T ss_dssp CEEEEBGGG--SC--GGGHHHHH--------HHHHHTTC-SEEEEEEE-BSSSSSCBCBCH-------HHHHHHGGGCC-
T ss_pred cEEEEEeee--cC--HhHHHHHH--------HHHHHcCC-CEEEEEEE-ecCCCcchhhhH-------HHHHHHHhhcC-
Confidence 457899999 86 44445555 66678999 99876543 445654444554 56788888876
Q ss_pred CccEEEEEeeCChHHHHHHHHHcCccceecccccccccCCCceeecCcchhHHHHHhcCCCcchhhhhhHhhccCCCCCC
Q psy9039 92 SVPVGVQILSGCNKAALATAQAAGLDFIRAESFVFGHMADEGLMNAQAGPLLRYRKQIGADNVLVFTDIKKKHSSHAITA 171 (251)
Q Consensus 92 ~~P~Gvn~~~N~~~~~~~ia~a~g~~Fir~~~~~~~~~~~~Gli~~da~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~ 171 (251)
.|+.+-++.|++..-...+...|++.+....... .. ....+..+..++.|. ++.-.+++. |+
T Consensus 63 -~~~~vhlmv~dp~~~i~~~~~aGadgv~vh~e~~--~~------~~~~~~~~~i~~~g~---~~gv~~~p~------t~ 124 (230)
T 1tqj_A 63 -KTLDVHLMIVEPEKYVEDFAKAGADIISVHVEHN--AS------PHLHRTLCQIRELGK---KAGAVLNPS------TP 124 (230)
T ss_dssp -SEEEEEEESSSGGGTHHHHHHHTCSEEEEECSTT--TC------TTHHHHHHHHHHTTC---EEEEEECTT------CC
T ss_pred -CcEEEEEEccCHHHHHHHHHHcCCCEEEECcccc--cc------hhHHHHHHHHHHcCC---cEEEEEeCC------Cc
Confidence 6999777777754445666677777776431100 00 123344555555554 222112211 33
Q ss_pred cccHHHHHHHhhhccccEEEe------cCCCCCCCCCHHHHHHHHhcC-----CCCEEEecCCChHhHHHhhc--CCEEE
Q psy9039 172 DVDITETAKAASFFLSDGLII------TGNATGDPADVSQLMSVKNAV-----DLPILIGSGVTSDNVEHYMT--ADALI 238 (251)
Q Consensus 172 ~~~i~~~a~~a~~~~~D~v~V------TG~~~g~~~~~~~l~~vr~~~-----~~PV~vG~GI~~~~v~~~~~--ADGvI 238 (251)
.++++.+. .++|.+.+ +|...-.+...++++++|+.. ++||.++|||+.+|+.++.+ ||+++
T Consensus 125 ~e~~~~~~-----~~~D~v~~msv~pg~ggq~~~~~~~~~i~~lr~~~~~~~~~~~I~v~GGI~~~~~~~~~~aGad~vv 199 (230)
T 1tqj_A 125 LDFLEYVL-----PVCDLILIMSVNPGFGGQSFIPEVLPKIRALRQMCDERGLDPWIEVDGGLKPNNTWQVLEAGANAIV 199 (230)
T ss_dssp GGGGTTTG-----GGCSEEEEESSCC----CCCCGGGHHHHHHHHHHHHHHTCCCEEEEESSCCTTTTHHHHHHTCCEEE
T ss_pred HHHHHHHH-----hcCCEEEEEEeccccCCccCcHHHHHHHHHHHHHHHhcCCCCcEEEECCcCHHHHHHHHHcCCCEEE
Confidence 33433322 25666533 222111223468899999887 89999999999999999986 99999
Q ss_pred EeceEeec
Q psy9039 239 IGSHFKQG 246 (251)
Q Consensus 239 VGS~~~~~ 246 (251)
|||++.+.
T Consensus 200 vGSai~~a 207 (230)
T 1tqj_A 200 AGSAVFNA 207 (230)
T ss_dssp ESHHHHTS
T ss_pred ECHHHHCC
Confidence 99998764
No 14
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=99.39 E-value=1.5e-13 Score=118.08 Aligned_cols=191 Identities=16% Similarity=0.169 Sum_probs=117.3
Q ss_pred eeecccccccCCCCCCCcchHHHHHHHHHhhCCCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCC
Q psy9039 11 NMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLP 90 (251)
Q Consensus 11 ~~~~~p~~~~~pG~P~~~~~~~~i~~~a~~~a~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~ 90 (251)
.|.+.||+++ +||. ...+.+ +.+.++|+ |.+.+-- .|-||......++ ..++++|+.++
T Consensus 10 ~~~i~p~i~a--~d~~--~~~~~i--------~~~~~~G~-d~i~l~~-~dg~f~~~~~~~~-------~~i~~l~~~~~ 68 (230)
T 1rpx_A 10 DIIVSPSILS--ANFS--KLGEQV--------KAIEQAGC-DWIHVDV-MDGRFVPNITIGP-------LVVDSLRPITD 68 (230)
T ss_dssp SCEEEEBGGG--SCGG--GHHHHH--------HHHHHTTC-CCEEEEE-EBSSSSSCBCCCH-------HHHHHHGGGCC
T ss_pred ceEEEEEeec--CCHH--HHHHHH--------HHHHHCCC-CEEEEee-ccCCcccccccCH-------HHHHHHHhccC
Confidence 4568999999 8763 334555 56678999 9998632 2335543333443 55677888776
Q ss_pred CCccEEEEEeeCChHHHHHHHHHcCccceecccccccccCCCceeecCcchhHHHHHhcCCCcchhhhhhHhhccCCCCC
Q psy9039 91 PSVPVGVQILSGCNKAALATAQAAGLDFIRAESFVFGHMADEGLMNAQAGPLLRYRKQIGADNVLVFTDIKKKHSSHAIT 170 (251)
Q Consensus 91 ~~~P~Gvn~~~N~~~~~~~ia~a~g~~Fir~~~~~~~~~~~~Gli~~da~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~ 170 (251)
.|+.+.+++|++......+...|++++...... . .+ +...+..+..++.+. ++...+. | .+
T Consensus 69 --~~~~v~l~vnd~~~~v~~~~~~Gad~v~vh~~~----~-~~---~~~~~~~~~~~~~g~---~ig~~~~-----p-~t 129 (230)
T 1rpx_A 69 --LPLDVHLMIVEPDQRVPDFIKAGADIVSVHCEQ----S-ST---IHLHRTINQIKSLGA---KAGVVLN-----P-GT 129 (230)
T ss_dssp --SCEEEEEESSSHHHHHHHHHHTTCSEEEEECST----T-TC---SCHHHHHHHHHHTTS---EEEEEEC-----T-TC
T ss_pred --CcEEEEEEecCHHHHHHHHHHcCCCEEEEEecC----c-cc---hhHHHHHHHHHHcCC---cEEEEeC-----C-CC
Confidence 699999999985556677777888988754110 0 00 122344555555443 2221121 1 12
Q ss_pred CcccHHHHHHHhhhccccEE---EecCCCCCC--CC-CHHHHHHHHhcC-----CCCEEEecCCChHhHHHhhc--CCEE
Q psy9039 171 ADVDITETAKAASFFLSDGL---IITGNATGD--PA-DVSQLMSVKNAV-----DLPILIGSGVTSDNVEHYMT--ADAL 237 (251)
Q Consensus 171 ~~~~i~~~a~~a~~~~~D~v---~VTG~~~g~--~~-~~~~l~~vr~~~-----~~PV~vG~GI~~~~v~~~~~--ADGv 237 (251)
+.+++..+ ..++|.+ .+...-+|. .. ..+.++++|+.+ ++|++++|||+++|+.++++ |||+
T Consensus 130 ~~e~~~~~-----~~~~d~vl~~~~~pg~~g~~~~~~~~~~i~~l~~~~~~~~~~~pi~v~GGI~~~n~~~~~~aGad~v 204 (230)
T 1rpx_A 130 PLTAIEYV-----LDAVDLVLIMSVNPGFGGQSFIESQVKKISDLRKICAERGLNPWIEVDGGVGPKNAYKVIEAGANAL 204 (230)
T ss_dssp CGGGGTTT-----TTTCSEEEEESSCTTCSSCCCCTTHHHHHHHHHHHHHHHTCCCEEEEESSCCTTTHHHHHHHTCCEE
T ss_pred CHHHHHHH-----HhhCCEEEEEEEcCCCCCccccHHHHHHHHHHHHHHHhcCCCceEEEECCCCHHHHHHHHHcCCCEE
Confidence 22332221 1357776 332111122 12 246678888776 79999999999999999876 9999
Q ss_pred EEeceEeec
Q psy9039 238 IIGSHFKQG 246 (251)
Q Consensus 238 IVGS~~~~~ 246 (251)
+|||+|.+.
T Consensus 205 vvgSaI~~a 213 (230)
T 1rpx_A 205 VAGSAVFGA 213 (230)
T ss_dssp EESHHHHTS
T ss_pred EEChhhhCC
Confidence 999998764
No 15
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=99.37 E-value=1.5e-12 Score=112.10 Aligned_cols=189 Identities=13% Similarity=0.114 Sum_probs=115.2
Q ss_pred cccccccCCCCCCCcchHHHHHHHHHhhCCCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCc
Q psy9039 14 DVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSV 93 (251)
Q Consensus 14 ~~p~~~~~pG~P~~~~~~~~i~~~a~~~a~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~ 93 (251)
+.||+.+ +| +....+.+ +.+.++|+ |.+.+--+ |-||......|+ ..++++|+.++ .
T Consensus 9 i~psi~a--~d--~~~l~~~i--------~~~~~~Ga-d~i~l~i~-Dg~fv~~~~~~~-------~~~~~lr~~~~--~ 65 (228)
T 1h1y_A 9 IAPSMLS--SD--FANLAAEA--------DRMVRLGA-DWLHMDIM-DGHFVPNLTIGA-------PVIQSLRKHTK--A 65 (228)
T ss_dssp EEEBGGG--SC--GGGHHHHH--------HHHHHTTC-SEEEEEEE-BSSSSSCBCBCH-------HHHHHHHTTCC--S
T ss_pred EEEEeee--CC--HHHHHHHH--------HHHHHcCC-CEEEEEEe-cCCcCcchhhCH-------HHHHHHHhhcC--C
Confidence 5799999 87 44444555 55678999 99866432 234544434454 55677888776 6
Q ss_pred cEEEEEeeCChHHHHHHHHHcCccceecccccccccCCCceeecCc-chhHHHHHhcCCCcchhhhhhHhhccCCCCCCc
Q psy9039 94 PVGVQILSGCNKAALATAQAAGLDFIRAESFVFGHMADEGLMNAQA-GPLLRYRKQIGADNVLVFTDIKKKHSSHAITAD 172 (251)
Q Consensus 94 P~Gvn~~~N~~~~~~~ia~a~g~~Fir~~~~~~~~~~~~Gli~~da-~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~ 172 (251)
|+.+-++.|++......+...|++.+..... -.+.. .+..+..++.+. ++.-.+++. ++.
T Consensus 66 ~~~v~lmv~d~~~~i~~~~~agad~v~vH~~----------~~~~~~~~~~~~i~~~g~---~igv~~~p~------t~~ 126 (228)
T 1h1y_A 66 YLDCHLMVTNPSDYVEPLAKAGASGFTFHIE----------VSRDNWQELIQSIKAKGM---RPGVSLRPG------TPV 126 (228)
T ss_dssp EEEEEEESSCGGGGHHHHHHHTCSEEEEEGG----------GCTTTHHHHHHHHHHTTC---EEEEEECTT------SCG
T ss_pred cEEEEEEecCHHHHHHHHHHcCCCEEEECCC----------CcccHHHHHHHHHHHcCC---CEEEEEeCC------CCH
Confidence 8887777787644466666677787754310 01122 334455455443 232112211 333
Q ss_pred ccHHHHHHHhhhccccEEEe-----cCCCCCCC-CCHHHHHHHHhcC-CCCEEEecCCChHhHHHhhc--CCEEEEeceE
Q psy9039 173 VDITETAKAASFFLSDGLII-----TGNATGDP-ADVSQLMSVKNAV-DLPILIGSGVTSDNVEHYMT--ADALIIGSHF 243 (251)
Q Consensus 173 ~~i~~~a~~a~~~~~D~v~V-----TG~~~g~~-~~~~~l~~vr~~~-~~PV~vG~GI~~~~v~~~~~--ADGvIVGS~~ 243 (251)
++++.+... ..++|.+.+ ++...... ..++.++++|+.. ++|++++|||+++|+.++.. ||+++|||++
T Consensus 127 e~~~~~~~~--~~~~d~vl~~sv~pg~~g~~~~~~~l~~i~~~~~~~~~~pi~v~GGI~~~ni~~~~~aGaD~vvvGsai 204 (228)
T 1h1y_A 127 EEVFPLVEA--ENPVELVLVMTVEPGFGGQKFMPEMMEKVRALRKKYPSLDIEVDGGLGPSTIDVAASAGANCIVAGSSI 204 (228)
T ss_dssp GGGHHHHHS--SSCCSEEEEESSCTTCSSCCCCGGGHHHHHHHHHHCTTSEEEEESSCSTTTHHHHHHHTCCEEEESHHH
T ss_pred HHHHHHHhc--CCCCCEEEEEeecCCCCcccCCHHHHHHHHHHHHhcCCCCEEEECCcCHHHHHHHHHcCCCEEEECHHH
Confidence 444443320 004566644 22111222 2357889999988 89999999999999999886 9999999998
Q ss_pred eec
Q psy9039 244 KQG 246 (251)
Q Consensus 244 ~~~ 246 (251)
.+.
T Consensus 205 ~~~ 207 (228)
T 1h1y_A 205 FGA 207 (228)
T ss_dssp HTS
T ss_pred HCC
Confidence 763
No 16
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=99.34 E-value=1.5e-12 Score=111.96 Aligned_cols=181 Identities=17% Similarity=0.199 Sum_probs=120.7
Q ss_pred CCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeCChHHHHHHHHHcCccceecc
Q psy9039 43 PPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQILSGCNKAALATAQAAGLDFIRAE 122 (251)
Q Consensus 43 ~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~~~~~~ia~a~g~~Fir~~ 122 (251)
+.+.++|+ |.|.+.+.....+ + .......++++++.++ +|+.++...++ ...+..+...|++++..+
T Consensus 40 ~~~~~~G~-d~i~v~~~~~~~~------~---~~~~~~~i~~i~~~~~--ipvi~~g~i~~-~~~~~~~~~~Gad~V~i~ 106 (253)
T 1h5y_A 40 VRYEEEGA-DEIAILDITAAPE------G---RATFIDSVKRVAEAVS--IPVLVGGGVRS-LEDATTLFRAGADKVSVN 106 (253)
T ss_dssp HHHHHTTC-SCEEEEECCCCTT------T---HHHHHHHHHHHHHHCS--SCEEEESSCCS-HHHHHHHHHHTCSEEEES
T ss_pred HHHHHcCC-CEEEEEeCCcccc------C---CcccHHHHHHHHHhcC--CCEEEECCCCC-HHHHHHHHHcCCCEEEEC
Confidence 66788999 9999876543211 1 1124567888998888 89999998887 555666677888988864
Q ss_pred cccccccCCCceeecCcchhHHHHHhcCCCcchhhhhhH-------hh-ccCCCCCCcccHHHHHHHhhhccccEEEecC
Q psy9039 123 SFVFGHMADEGLMNAQAGPLLRYRKQIGADNVLVFTDIK-------KK-HSSHAITADVDITETAKAASFFLSDGLIITG 194 (251)
Q Consensus 123 ~~~~~~~~~~Gli~~da~e~~~~r~~l~~~~i~i~a~v~-------~k-~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG 194 (251)
.. ...+...+.+.++.++.+.+.+-.++. .+ ++.. .....+..+.++.+...|+|.+.+++
T Consensus 107 ~~----------~~~~~~~~~~~~~~~g~~~i~~~~~~~~~~g~~~v~~~~~~-~~~~~~~~e~~~~~~~~G~d~i~~~~ 175 (253)
T 1h5y_A 107 TA----------AVRNPQLVALLAREFGSQSTVVAIDAKWNGEYYEVYVKGGR-EATGLDAVKWAKEVEELGAGEILLTS 175 (253)
T ss_dssp HH----------HHHCTHHHHHHHHHHCGGGEEEEEEEEECSSSEEEEETTTT-EEEEEEHHHHHHHHHHHTCSEEEEEE
T ss_pred hH----------HhhCcHHHHHHHHHcCCCcEEEEEEeecCCCcEEEEEeCCe-ecCCCCHHHHHHHHHhCCCCEEEEec
Confidence 11 112344556667777643333221221 00 0100 00112445556666667999999876
Q ss_pred CCC---CCCCCHHHHHHHHhcCCCCEEEecCCC-hHhHHHhhc--CCEEEEeceEeecC
Q psy9039 195 NAT---GDPADVSQLMSVKNAVDLPILIGSGVT-SDNVEHYMT--ADALIIGSHFKQGG 247 (251)
Q Consensus 195 ~~~---g~~~~~~~l~~vr~~~~~PV~vG~GI~-~~~v~~~~~--ADGvIVGS~~~~~g 247 (251)
... +...+.+.++++++.+++||+++|||+ ++++.+++. |||++|||+|.+++
T Consensus 176 ~~~~g~~~~~~~~~i~~l~~~~~~pvia~GGi~~~~~~~~~~~~Ga~~v~vgsal~~~~ 234 (253)
T 1h5y_A 176 IDRDGTGLGYDVELIRRVADSVRIPVIASGGAGRVEHFYEAAAAGADAVLAASLFHFRV 234 (253)
T ss_dssp TTTTTTCSCCCHHHHHHHHHHCSSCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHTTS
T ss_pred ccCCCCcCcCCHHHHHHHHHhcCCCEEEeCCCCCHHHHHHHHHcCCcHHHHHHHHHcCC
Confidence 543 223467889999998899999999995 799999886 99999999998764
No 17
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=99.30 E-value=1.7e-12 Score=112.47 Aligned_cols=181 Identities=15% Similarity=0.178 Sum_probs=118.2
Q ss_pred CCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeCChHHHHHHHHHcCccceecc
Q psy9039 43 PPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQILSGCNKAALATAQAAGLDFIRAE 122 (251)
Q Consensus 43 ~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~~~~~~ia~a~g~~Fir~~ 122 (251)
+.+.++|+ |.|.+ +++.+++.. .......++++++.++ +|+.++.+.|+ ......+.+.|++.+...
T Consensus 38 ~~~~~~Ga-d~i~v--------~d~~~~~~~-~~~~~~~i~~i~~~~~--iPvi~~Ggi~~-~~~~~~~~~~Gad~V~lg 104 (252)
T 1ka9_F 38 RAYDEAGA-DELVF--------LDISATHEE-RAILLDVVARVAERVF--IPLTVGGGVRS-LEDARKLLLSGADKVSVN 104 (252)
T ss_dssp HHHHHHTC-SCEEE--------EECCSSTTC-HHHHHHHHHHHHTTCC--SCEEEESSCCS-HHHHHHHHHHTCSEEEEC
T ss_pred HHHHHcCC-CEEEE--------EcCCccccC-ccccHHHHHHHHHhCC--CCEEEECCcCC-HHHHHHHHHcCCCEEEEC
Confidence 56788999 99854 344322211 1224567788998887 89999999998 566666667777776652
Q ss_pred cccccccCCCceeecCcchhHHHHHhcCCCcchhhhhhH-------hh-ccCCCCCCcccHHHHHHHhhhccccEEEecC
Q psy9039 123 SFVFGHMADEGLMNAQAGPLLRYRKQIGADNVLVFTDIK-------KK-HSSHAITADVDITETAKAASFFLSDGLIITG 194 (251)
Q Consensus 123 ~~~~~~~~~~Gli~~da~e~~~~r~~l~~~~i~i~a~v~-------~k-~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG 194 (251)
. . ...+...+.+.++.++.+.+.+-.++. ++ |+..- .+..+..+.++.+...|++.+++|+
T Consensus 105 ~---------~-~l~~p~~~~~~~~~~~~~~i~~~~~~~~~~g~~~v~~~g~~~-~~~~~~~e~~~~~~~~G~~~i~~~~ 173 (252)
T 1ka9_F 105 S---------A-AVRRPELIRELADHFGAQAVVLAIDARWRGDFPEVHVAGGRV-PTGLHAVEWAVKGVELGAGEILLTS 173 (252)
T ss_dssp H---------H-HHHCTHHHHHHHHHHCGGGEEEEEEEEEETTEEEEEETTTTE-EEEEEHHHHHHHHHHHTCCEEEEEE
T ss_pred h---------H-HHhCcHHHHHHHHHcCCCcEEEEEEEecCCCCEEEEECCCcc-ccCCcHHHHHHHHHHcCCCEEEEec
Confidence 1 0 112233455666666543332322221 00 11110 0113455666777667999999986
Q ss_pred CC-CCC--CCCHHHHHHHHhcCCCCEEEecCCC-hHhHHHhhc--CCEEEEeceEeecC
Q psy9039 195 NA-TGD--PADVSQLMSVKNAVDLPILIGSGVT-SDNVEHYMT--ADALIIGSHFKQGG 247 (251)
Q Consensus 195 ~~-~g~--~~~~~~l~~vr~~~~~PV~vG~GI~-~~~v~~~~~--ADGvIVGS~~~~~g 247 (251)
.. ++. ..+++.++++++.+++||+++|||+ ++++.++++ |||++|||+|.++.
T Consensus 174 ~~~~g~~~g~~~~~i~~l~~~~~ipvia~GGI~~~~d~~~~~~~Gadgv~vgsal~~~~ 232 (252)
T 1ka9_F 174 MDRDGTKEGYDLRLTRMVAEAVGVPVIASGGAGRMEHFLEAFQAGAEAALAASVFHFGE 232 (252)
T ss_dssp TTTTTTCSCCCHHHHHHHHHHCSSCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHTTS
T ss_pred ccCCCCcCCCCHHHHHHHHHHcCCCEEEeCCCCCHHHHHHHHHCCCHHHHHHHHHHcCC
Confidence 43 232 2358999999999999999999995 899999886 99999999997654
No 18
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=99.30 E-value=2.4e-12 Score=108.89 Aligned_cols=177 Identities=18% Similarity=0.227 Sum_probs=112.9
Q ss_pred CCCcchHHHHHHHHHhhCCCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeCCh
Q psy9039 25 PEITANMTRLCAEIRKVLPPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQILSGCN 104 (251)
Q Consensus 25 P~~~~~~~~i~~~a~~~a~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~ 104 (251)
|+.+.+++.+ +.+. .|+ |.+++ |+||+.. .|+ ..++++|+..++ .|+.+++...++
T Consensus 10 ~~~~~~~~~~--------~~~~-~~~-diie~----G~p~~~~--~g~-------~~i~~ir~~~~~-~~i~~~~~~~~~ 65 (211)
T 3f4w_A 10 LTLPEAMVFM--------DKVV-DDV-DIIEV----GTPFLIR--EGV-------NAIKAIKEKYPH-KEVLADAKIMDG 65 (211)
T ss_dssp CCHHHHHHHH--------HHHG-GGC-SEEEE----CHHHHHH--HTT-------HHHHHHHHHCTT-SEEEEEEEECSC
T ss_pred CCHHHHHHHH--------HHhh-cCc-cEEEe----CcHHHHh--ccH-------HHHHHHHHhCCC-CEEEEEEEeccc
Confidence 5555556655 4454 599 99975 7788532 343 467888887433 699998887764
Q ss_pred HHH-HHHHHHcCccceecccccccccCCCceeecCcchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhh
Q psy9039 105 KAA-LATAQAAGLDFIRAESFVFGHMADEGLMNAQAGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAAS 183 (251)
Q Consensus 105 ~~~-~~ia~a~g~~Fir~~~~~~~~~~~~Gli~~da~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~ 183 (251)
... ...+...|++++-..... ...+..++.++.++++. +++-++. .+ .+..+.++.+.
T Consensus 66 ~~~~~~~~~~~Gad~v~v~~~~---------~~~~~~~~~~~~~~~g~---~~~v~~~----~~-----~t~~~~~~~~~ 124 (211)
T 3f4w_A 66 GHFESQLLFDAGADYVTVLGVT---------DVLTIQSCIRAAKEAGK---QVVVDMI----CV-----DDLPARVRLLE 124 (211)
T ss_dssp HHHHHHHHHHTTCSEEEEETTS---------CHHHHHHHHHHHHHHTC---EEEEECT----TC-----SSHHHHHHHHH
T ss_pred hHHHHHHHHhcCCCEEEEeCCC---------ChhHHHHHHHHHHHcCC---eEEEEec----CC-----CCHHHHHHHHH
Confidence 443 555666777776643110 01123456666677664 2221100 01 12334445555
Q ss_pred hccccEEEec----CCCCCCCCCHHHHHHHHhcC-CCCEEEecCCChHhHHHhhc--CCEEEEeceEeecC
Q psy9039 184 FFLSDGLIIT----GNATGDPADVSQLMSVKNAV-DLPILIGSGVTSDNVEHYMT--ADALIIGSHFKQGG 247 (251)
Q Consensus 184 ~~~~D~v~VT----G~~~g~~~~~~~l~~vr~~~-~~PV~vG~GI~~~~v~~~~~--ADGvIVGS~~~~~g 247 (251)
..|+|.+.+. |.+.+ ....+.++++|+.. ++|++++|||+++|+.++++ ||+++|||+|.+..
T Consensus 125 ~~g~d~i~v~~g~~g~~~~-~~~~~~i~~l~~~~~~~~i~~~gGI~~~~~~~~~~~Gad~vvvGsai~~~~ 194 (211)
T 3f4w_A 125 EAGADMLAVHTGTDQQAAG-RKPIDDLITMLKVRRKARIAVAGGISSQTVKDYALLGPDVVIVGSAITHAA 194 (211)
T ss_dssp HHTCCEEEEECCHHHHHTT-CCSHHHHHHHHHHCSSCEEEEESSCCTTTHHHHHTTCCSEEEECHHHHTCS
T ss_pred HcCCCEEEEcCCCcccccC-CCCHHHHHHHHHHcCCCcEEEECCCCHHHHHHHHHcCCCEEEECHHHcCCC
Confidence 5688887763 22221 23578899999886 89999999999999999996 99999999987643
No 19
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=99.27 E-value=1.8e-11 Score=106.02 Aligned_cols=172 Identities=16% Similarity=0.157 Sum_probs=115.4
Q ss_pred ccCCCCCCCcc-hHHHHHHHHHhhCCCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCcc-EE
Q psy9039 19 LEAESGPEITA-NMTRLCAEIRKVLPPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVP-VG 96 (251)
Q Consensus 19 ~~~pG~P~~~~-~~~~i~~~a~~~a~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P-~G 96 (251)
.++||.|-++. .+..+ |++++++|+ .+|.+.+ ...++++|+.++ +| +|
T Consensus 25 q~~~~~pl~~~~~~~~~-------A~a~~~~Ga-~~i~~~~--------------------~~~i~~ir~~v~--~Pvig 74 (229)
T 3q58_A 25 QPVPGSPMDKPEIVAAM-------AQAAASAGA-VAVRIEG--------------------IENLRTVRPHLS--VPIIG 74 (229)
T ss_dssp CCCTTSTTCSHHHHHHH-------HHHHHHTTC-SEEEEES--------------------HHHHHHHGGGCC--SCEEE
T ss_pred eCCCCCCCCCcchHHHH-------HHHHHHCCC-cEEEECC--------------------HHHHHHHHHhcC--CCEEE
Confidence 56789999985 44444 367789999 9997521 245789999998 79 56
Q ss_pred EEE--------eeCChHHHHHHHHHcCccceecccccccccCCCceeec-CcchhHHHHHhcCCCcchhhhhhHhhccCC
Q psy9039 97 VQI--------LSGCNKAALATAQAAGLDFIRAESFVFGHMADEGLMNA-QAGPLLRYRKQIGADNVLVFTDIKKKHSSH 167 (251)
Q Consensus 97 vn~--------~~N~~~~~~~ia~a~g~~Fir~~~~~~~~~~~~Gli~~-da~e~~~~r~~l~~~~i~i~a~v~~k~~~~ 167 (251)
++- |..+.......+...|++++-... .. ...| ...++.++.++.+. .++.+
T Consensus 75 ~~k~~~~~~~~~I~~~~~~i~~~~~aGad~I~l~~----~~----~~~p~~l~~~i~~~~~~g~---~v~~~-------- 135 (229)
T 3q58_A 75 IIKRDLTGSPVRITPYLQDVDALAQAGADIIAFDA----SF----RSRPVDIDSLLTRIRLHGL---LAMAD-------- 135 (229)
T ss_dssp ECBCCCSSCCCCBSCSHHHHHHHHHHTCSEEEEEC----CS----SCCSSCHHHHHHHHHHTTC---EEEEE--------
T ss_pred EEeecCCCCceEeCccHHHHHHHHHcCCCEEEECc----cc----cCChHHHHHHHHHHHHCCC---EEEEe--------
Confidence 652 333323455667788999886531 11 0112 23455555555543 33321
Q ss_pred CCCCcccHHHHHHHhhhccccEEEec--CCCC---CCCCCHHHHHHHHhcCCCCEEEecCC-ChHhHHHhhc--CCEEEE
Q psy9039 168 AITADVDITETAKAASFFLSDGLIIT--GNAT---GDPADVSQLMSVKNAVDLPILIGSGV-TSDNVEHYMT--ADALII 239 (251)
Q Consensus 168 ~~~~~~~i~~~a~~a~~~~~D~v~VT--G~~~---g~~~~~~~l~~vr~~~~~PV~vG~GI-~~~~v~~~~~--ADGvIV 239 (251)
....+.++.+...|+|.+++| |..+ ...++++.++++++. ++||++.||| |++++.+++. ||||+|
T Consensus 136 -----v~t~eea~~a~~~Gad~Ig~~~~g~t~~~~~~~~~~~li~~l~~~-~ipvIA~GGI~t~~d~~~~~~~GadgV~V 209 (229)
T 3q58_A 136 -----CSTVNEGISCHQKGIEFIGTTLSGYTGPITPVEPDLAMVTQLSHA-GCRVIAEGRYNTPALAANAIEHGAWAVTV 209 (229)
T ss_dssp -----CSSHHHHHHHHHTTCSEEECTTTTSSSSCCCSSCCHHHHHHHHTT-TCCEEEESSCCSHHHHHHHHHTTCSEEEE
T ss_pred -----cCCHHHHHHHHhCCCCEEEecCccCCCCCcCCCCCHHHHHHHHHc-CCCEEEECCCCCHHHHHHHHHcCCCEEEE
Confidence 122345666777799999764 3211 134578999999988 9999999999 7999999996 999999
Q ss_pred eceEee
Q psy9039 240 GSHFKQ 245 (251)
Q Consensus 240 GS~~~~ 245 (251)
||+|.+
T Consensus 210 Gsai~~ 215 (229)
T 3q58_A 210 GSAITR 215 (229)
T ss_dssp CHHHHC
T ss_pred chHhcC
Confidence 999875
No 20
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=99.27 E-value=1.8e-11 Score=106.07 Aligned_cols=172 Identities=15% Similarity=0.157 Sum_probs=114.3
Q ss_pred ccCCCCCCCcc-hHHHHHHHHHhhCCCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCcc-EE
Q psy9039 19 LEAESGPEITA-NMTRLCAEIRKVLPPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVP-VG 96 (251)
Q Consensus 19 ~~~pG~P~~~~-~~~~i~~~a~~~a~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P-~G 96 (251)
.++||.|-+.. .+..+ +++++++|+ .+|.+.+ ...++++|+.++ +| +|
T Consensus 25 q~~~~~pl~~~~~~~~~-------A~a~~~~Ga-~~i~~~~--------------------~~~i~~ir~~v~--~Pvig 74 (232)
T 3igs_A 25 QPVPGSPLDKPEIVAAM-------ALAAEQAGA-VAVRIEG--------------------IDNLRMTRSLVS--VPIIG 74 (232)
T ss_dssp CCCTTCTTCSHHHHHHH-------HHHHHHTTC-SEEEEES--------------------HHHHHHHHTTCC--SCEEE
T ss_pred eCCCCCCCCCcchHHHH-------HHHHHHCCC-eEEEECC--------------------HHHHHHHHHhcC--CCEEE
Confidence 56789999984 44444 367789999 9997511 245789999988 79 55
Q ss_pred EE--------EeeCChHHHHHHHHHcCccceecccccccccCCCceeec-CcchhHHHHHhcCCCcchhhhhhHhhccCC
Q psy9039 97 VQ--------ILSGCNKAALATAQAAGLDFIRAESFVFGHMADEGLMNA-QAGPLLRYRKQIGADNVLVFTDIKKKHSSH 167 (251)
Q Consensus 97 vn--------~~~N~~~~~~~ia~a~g~~Fir~~~~~~~~~~~~Gli~~-da~e~~~~r~~l~~~~i~i~a~v~~k~~~~ 167 (251)
++ +|..+.......+...|++++-... .. ...| ...++.++.++.+. .++.+
T Consensus 75 ~~k~d~~~~~~~I~~~~~~i~~~~~~Gad~V~l~~----~~----~~~p~~l~~~i~~~~~~g~---~v~~~-------- 135 (232)
T 3igs_A 75 IIKRDLDESPVRITPFLDDVDALAQAGAAIIAVDG----TA----RQRPVAVEALLARIHHHHL---LTMAD-------- 135 (232)
T ss_dssp ECBCCCSSCCCCBSCSHHHHHHHHHHTCSEEEEEC----CS----SCCSSCHHHHHHHHHHTTC---EEEEE--------
T ss_pred EEeecCCCcceEeCccHHHHHHHHHcCCCEEEECc----cc----cCCHHHHHHHHHHHHHCCC---EEEEe--------
Confidence 44 2333323455667788999886531 11 0112 23445555555543 33321
Q ss_pred CCCCcccHHHHHHHhhhccccEEEec--CCCC---CCCCCHHHHHHHHhcCCCCEEEecCC-ChHhHHHhhc--CCEEEE
Q psy9039 168 AITADVDITETAKAASFFLSDGLIIT--GNAT---GDPADVSQLMSVKNAVDLPILIGSGV-TSDNVEHYMT--ADALII 239 (251)
Q Consensus 168 ~~~~~~~i~~~a~~a~~~~~D~v~VT--G~~~---g~~~~~~~l~~vr~~~~~PV~vG~GI-~~~~v~~~~~--ADGvIV 239 (251)
....+.++.+...|+|.++++ |..+ ...++++.++++++. ++||++.||| |++++.+++. |||++|
T Consensus 136 -----v~t~eea~~a~~~Gad~Ig~~~~g~t~~~~~~~~~~~~i~~l~~~-~ipvIA~GGI~t~~d~~~~~~~GadgV~V 209 (232)
T 3igs_A 136 -----CSSVDDGLACQRLGADIIGTTMSGYTTPDTPEEPDLPLVKALHDA-GCRVIAEGRYNSPALAAEAIRYGAWAVTV 209 (232)
T ss_dssp -----CCSHHHHHHHHHTTCSEEECTTTTSSSSSCCSSCCHHHHHHHHHT-TCCEEEESCCCSHHHHHHHHHTTCSEEEE
T ss_pred -----CCCHHHHHHHHhCCCCEEEEcCccCCCCCCCCCCCHHHHHHHHhc-CCcEEEECCCCCHHHHHHHHHcCCCEEEE
Confidence 122345666777799999764 3211 234578999999988 9999999999 7999999996 999999
Q ss_pred eceEee
Q psy9039 240 GSHFKQ 245 (251)
Q Consensus 240 GS~~~~ 245 (251)
||+|.+
T Consensus 210 Gsal~~ 215 (232)
T 3igs_A 210 GSAITR 215 (232)
T ss_dssp CHHHHC
T ss_pred ehHhcC
Confidence 999874
No 21
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=99.26 E-value=4.5e-12 Score=111.81 Aligned_cols=66 Identities=14% Similarity=0.301 Sum_probs=50.5
Q ss_pred HHHhhhccccEEEe----cCCCCCCCCCHHHHHHHHhcCCCCEEEecCC-ChHhHHHhhc--CCEEEEeceEee
Q psy9039 179 AKAASFFLSDGLII----TGNATGDPADVSQLMSVKNAVDLPILIGSGV-TSDNVEHYMT--ADALIIGSHFKQ 245 (251)
Q Consensus 179 a~~a~~~~~D~v~V----TG~~~g~~~~~~~l~~vr~~~~~PV~vG~GI-~~~~v~~~~~--ADGvIVGS~~~~ 245 (251)
++.+...++|.+.. ||++.+. .+.+.++++|+.+++||+++||| +++++++++. ||||+|||+|.+
T Consensus 140 a~~~~~~gad~v~~~~~~~Gt~~~~-~~~~~l~~i~~~~~iPviv~gGI~t~eda~~~~~~GAdgViVGSAi~~ 212 (264)
T 1xm3_A 140 ARKLEELGVHAIMPGASPIGSGQGI-LNPLNLSFIIEQAKVPVIVDAGIGSPKDAAYAMELGADGVLLNTAVSG 212 (264)
T ss_dssp HHHHHHHTCSCBEECSSSTTCCCCC-SCHHHHHHHHHHCSSCBEEESCCCSHHHHHHHHHTTCSEEEESHHHHT
T ss_pred HHHHHHhCCCEEEECCcccCCCCCC-CCHHHHHHHHhcCCCCEEEEeCCCCHHHHHHHHHcCCCEEEEcHHHhC
Confidence 44444456777644 4444332 24678999999889999999999 5999999885 999999999875
No 22
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=99.22 E-value=3.8e-11 Score=102.32 Aligned_cols=159 Identities=19% Similarity=0.140 Sum_probs=100.5
Q ss_pred CCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeCChHHHHHHHHHcCccceecc
Q psy9039 43 PPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQILSGCNKAALATAQAAGLDFIRAE 122 (251)
Q Consensus 43 ~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~~~~~~ia~a~g~~Fir~~ 122 (251)
+.+.++|+ |.|.+ ..+..++...++ ...+.+.++++.+..+ +|+-+| .. ...+...|+++++..
T Consensus 38 ~~~~~~G~-~~i~l----~~~~~~~~~~~~--~~~~~~~l~~~~~~~~--v~v~v~----~~---~~~a~~~gad~v~l~ 101 (227)
T 2tps_A 38 QKALKGGA-TLYQF----REKGGDALTGEA--RIKFAEKAQAACREAG--VPFIVN----DD---VELALNLKADGIHIG 101 (227)
T ss_dssp HHHHHHTC-SEEEE----CCCSTTCCCHHH--HHHHHHHHHHHHHHHT--CCEEEE----SC---HHHHHHHTCSEEEEC
T ss_pred HHHHHCCC-CEEEE----ecCCCCHhHHHH--HHHHHHHHHHHHHHcC--CeEEEc----CH---HHHHHHcCCCEEEEC
Confidence 66778999 99986 444444433333 2334444444444444 565554 32 456677788888742
Q ss_pred cccccccCCCceeecCcchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEe-----cCCCC
Q psy9039 123 SFVFGHMADEGLMNAQAGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLII-----TGNAT 197 (251)
Q Consensus 123 ~~~~~~~~~~Gli~~da~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~V-----TG~~~ 197 (251)
.. ..++.+.++.++. .++. + +.+ +..+ +..+...|+|++.+ |+.+.
T Consensus 102 --------~~------~~~~~~~~~~~g~---~~~~-~----s~~------t~~e-~~~a~~~g~d~v~~~~v~~t~~~~ 152 (227)
T 2tps_A 102 --------QE------DANAKEVRAAIGD---MILG-V----SAH------TMSE-VKQAEEDGADYVGLGPIYPTETKK 152 (227)
T ss_dssp --------TT------SSCHHHHHHHHTT---SEEE-E----EEC------SHHH-HHHHHHHTCSEEEECCSSCCCSSS
T ss_pred --------CC------ccCHHHHHHhcCC---cEEE-E----ecC------CHHH-HHHHHhCCCCEEEECCCcCCCCCC
Confidence 10 1135566666653 1110 1 111 2333 34444568999985 66655
Q ss_pred C--CCCCHHHHHHHHhcCC-CCEEEecCCChHhHHHhhc--CCEEEEeceEeec
Q psy9039 198 G--DPADVSQLMSVKNAVD-LPILIGSGVTSDNVEHYMT--ADALIIGSHFKQG 246 (251)
Q Consensus 198 g--~~~~~~~l~~vr~~~~-~PV~vG~GI~~~~v~~~~~--ADGvIVGS~~~~~ 246 (251)
+ ....++.++++++..+ +|++++|||+++|+.+++. |||++|||+|.+.
T Consensus 153 ~~~~~~~~~~l~~~~~~~~~~pvia~GGI~~~nv~~~~~~Ga~gv~vgs~i~~~ 206 (227)
T 2tps_A 153 DTRAVQGVSLIEAVRRQGISIPIVGIGGITIDNAAPVIQAGADGVSMISAISQA 206 (227)
T ss_dssp SCCCCCTTHHHHHHHHTTCCCCEEEESSCCTTTSHHHHHTTCSEEEESHHHHTS
T ss_pred CCCCccCHHHHHHHHHhCCCCCEEEEcCCCHHHHHHHHHcCCCEEEEhHHhhcC
Confidence 4 3346788999998887 9999999999999999885 9999999998753
No 23
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=99.21 E-value=2.2e-11 Score=105.58 Aligned_cols=181 Identities=14% Similarity=0.138 Sum_probs=117.7
Q ss_pred CCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeCChHHHHHHHHHcCccceecc
Q psy9039 43 PPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQILSGCNKAALATAQAAGLDFIRAE 122 (251)
Q Consensus 43 ~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~~~~~~ia~a~g~~Fir~~ 122 (251)
+.++++|+ |.|.+-+..+ .+. -.......++++++.++ +|+-++...++ ......+...|++.+...
T Consensus 37 ~~~~~~Ga-d~i~v~d~~~--------~~~-~~~~~~~~i~~i~~~~~--ipvi~~ggI~~-~~~~~~~~~~Gad~V~lg 103 (253)
T 1thf_D 37 KFYSEIGI-DELVFLDITA--------SVE-KRKTMLELVEKVAEQID--IPFTVGGGIHD-FETASELILRGADKVSIN 103 (253)
T ss_dssp HHHHHTTC-CEEEEEESSC--------SSS-HHHHHHHHHHHHHTTCC--SCEEEESSCCS-HHHHHHHHHTTCSEEEES
T ss_pred HHHHHcCC-CEEEEECCch--------hhc-CCcccHHHHHHHHHhCC--CCEEEeCCCCC-HHHHHHHHHcCCCEEEEC
Confidence 56788999 9997654332 111 12234567888998888 89999999987 455666666777776642
Q ss_pred cccccccCCCceeecCcchhHHHHHhcCCCcchhhhhhH-------hh-ccCCCCCCcccHHHHHHHhhhccccEEEecC
Q psy9039 123 SFVFGHMADEGLMNAQAGPLLRYRKQIGADNVLVFTDIK-------KK-HSSHAITADVDITETAKAASFFLSDGLIITG 194 (251)
Q Consensus 123 ~~~~~~~~~~Gli~~da~e~~~~r~~l~~~~i~i~a~v~-------~k-~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG 194 (251)
. . ...+...+.+.++.++.+.+.+--++. ++ |+..- .+..+..+.++.+...|++.+++|+
T Consensus 104 ~----~------~l~~p~~~~~~~~~~g~~~i~~~~~~~~~~g~~~v~~~g~~~-~~~~~~~e~~~~~~~~G~~~i~~~~ 172 (253)
T 1thf_D 104 T----A------AVENPSLITQIAQTFGSQAVVVAIDAKRVDGEFMVFTYSGKK-NTGILLRDWVVEVEKRGAGEILLTS 172 (253)
T ss_dssp H----H------HHHCTHHHHHHHHHHCGGGEEEEEEEEEETTEEEEEETTTTE-EEEEEHHHHHHHHHHTTCSEEEEEE
T ss_pred h----H------HHhChHHHHHHHHHcCCCcEEEEEEEEccCCcEEEEECCCcc-ccCCCHHHHHHHHHHCCCCEEEEEe
Confidence 1 0 112334466666666643222211111 00 11110 0112455666777667999999987
Q ss_pred CCCCC---CCCHHHHHHHHhcCCCCEEEecCCC-hHhHHHhhc--CCEEEEeceEeecC
Q psy9039 195 NATGD---PADVSQLMSVKNAVDLPILIGSGVT-SDNVEHYMT--ADALIIGSHFKQGG 247 (251)
Q Consensus 195 ~~~g~---~~~~~~l~~vr~~~~~PV~vG~GI~-~~~v~~~~~--ADGvIVGS~~~~~g 247 (251)
...+. ..+++.++++++.+++||+++|||+ ++++.+++. |||++|||+|..+.
T Consensus 173 ~~~~g~~~g~~~~~~~~l~~~~~ipvia~GGI~~~~d~~~~~~~Gadgv~vGsal~~~~ 231 (253)
T 1thf_D 173 IDRDGTKSGYDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLAGADAALAASVFHFRE 231 (253)
T ss_dssp TTTTTSCSCCCHHHHHHHGGGCCSCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHTTC
T ss_pred ccCCCCCCCCCHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCChHHHHHHHHHcCC
Confidence 53322 2468899999998999999999995 799999886 99999999997653
No 24
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=99.21 E-value=3.7e-11 Score=104.95 Aligned_cols=182 Identities=19% Similarity=0.174 Sum_probs=111.1
Q ss_pred CCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeCChHHHHHHHHHcCccceecc
Q psy9039 43 PPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQILSGCNKAALATAQAAGLDFIRAE 122 (251)
Q Consensus 43 ~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~~~~~~ia~a~g~~Fir~~ 122 (251)
+.+.++|+ |.|.+.+... .+.. .++ ....++++++.++ +|+.++.+.|+ ...+..+...|++.+-..
T Consensus 37 ~~~~~~Ga-~~i~v~d~~~-~~~~---~g~-----~~~~i~~i~~~~~--iPvi~~ggi~~-~~~i~~~~~~Gad~v~lg 103 (266)
T 2w6r_A 37 VEVEKRGA-GEILLTSIDR-DGTK---SGY-----DTEMIRFVRPLTT--LPIIASGGAGK-MEHFLEAFLAGADKALAA 103 (266)
T ss_dssp HHHHHHTC-SEEEEEETTT-SSCS---SCC-----CHHHHHHHGGGCC--SCEEEESCCCS-THHHHHHHHHTCSEEECC
T ss_pred HHHHHCCC-CEEEEEecCc-ccCC---Ccc-----cHHHHHHHHHhcC--CCEEEECCCCC-HHHHHHHHHcCCcHhhhh
Confidence 66778999 9999854321 1111 122 3467788888888 89999999987 566666666777766542
Q ss_pred cccccccCCCceeec--CcchhHHHHHhcC--CCcchhhhhhH-------hh-ccCCCCCCcccHHHHHHHhhhccccEE
Q psy9039 123 SFVFGHMADEGLMNA--QAGPLLRYRKQIG--ADNVLVFTDIK-------KK-HSSHAITADVDITETAKAASFFLSDGL 190 (251)
Q Consensus 123 ~~~~~~~~~~Gli~~--da~e~~~~r~~l~--~~~i~i~a~v~-------~k-~~~~~~~~~~~i~~~a~~a~~~~~D~v 190 (251)
...+.. +...+.++.+.++ .+.+.+-.++. ++ |+..- .++.+..+.++.+...|++.+
T Consensus 104 ---------~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~d~~~~~g~~~v~~~g~~~-~~~~~~~e~~~~~~~~G~~~i 173 (266)
T 2w6r_A 104 ---------SVFHFREIDMRELKEYLKKHGGSGQAVVVAIDAKRVDGEFMVFTHSGKK-NTGILLRDWVVEVEKRGAGEI 173 (266)
T ss_dssp ---------CCC------CHHHHHHCC----CCCEEEEEEEEEEETTEEEEEETTTTE-EEEEEHHHHHHHHHHTTCSEE
T ss_pred ---------HHHHhCCCCHHHHHHHHHHcCCCCCEEEEEEEEEecCCCEEEEECCCce-ecchhHHHHHHHHHHcCCCEE
Confidence 111212 3334444444444 22221111110 00 11100 011245566677777799999
Q ss_pred EecCCC-CCC--CCCHHHHHHHHhcCCCCEEEecCC-ChHhHHHhhc--CCEEEEeceEeecC
Q psy9039 191 IITGNA-TGD--PADVSQLMSVKNAVDLPILIGSGV-TSDNVEHYMT--ADALIIGSHFKQGG 247 (251)
Q Consensus 191 ~VTG~~-~g~--~~~~~~l~~vr~~~~~PV~vG~GI-~~~~v~~~~~--ADGvIVGS~~~~~g 247 (251)
++|+.. .|. ..+++.++++++.+++||+++||| +++++.+++. |||++|||+|.++.
T Consensus 174 ~~t~~~~~g~~~g~~~~~i~~l~~~~~ipvia~GGI~~~ed~~~~~~~Gadgv~vgsal~~~~ 236 (266)
T 2w6r_A 174 LLTSIDRDGTKSGYDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLAGADAALAASVFHFRE 236 (266)
T ss_dssp EEEETTTTTTCSCCCHHHHHHHGGGCCSCEEEESCCCSHHHHHHHHHHTCSEEEESTTTC---
T ss_pred EEEeecCCCCcCCCCHHHHHHHHHHcCCCEEEeCCCCCHHHHHHHHHcCCHHHHccHHHHcCC
Confidence 998743 232 246889999999999999999999 5899999886 99999999998764
No 25
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=99.17 E-value=3.7e-11 Score=106.57 Aligned_cols=165 Identities=16% Similarity=0.161 Sum_probs=110.3
Q ss_pred CCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeCChHHHHHHHHHcCccceecc
Q psy9039 43 PPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQILSGCNKAALATAQAAGLDFIRAE 122 (251)
Q Consensus 43 ~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~~~~~~ia~a~g~~Fir~~ 122 (251)
+.++++|+ ++|-+-.+- .|.. | ....++++|+.++ +|+-..-+.-+ .+++..|.+.|++.+...
T Consensus 79 ~~y~~~GA-~~isvltd~--~~f~----G------s~~~l~~ir~~v~--lPvl~kdfiid-~~qv~~A~~~GAD~VlLi 142 (272)
T 3qja_A 79 QAYQDGGA-RIVSVVTEQ--RRFQ----G------SLDDLDAVRASVS--IPVLRKDFVVQ-PYQIHEARAHGADMLLLI 142 (272)
T ss_dssp HHHHHTTC-SEEEEECCG--GGHH----H------HHHHHHHHHHHCS--SCEEEESCCCS-HHHHHHHHHTTCSEEEEE
T ss_pred HHHHHcCC-CEEEEecCh--hhcC----C------CHHHHHHHHHhCC--CCEEECccccC-HHHHHHHHHcCCCEEEEe
Confidence 66889999 999873322 2222 1 2346778888888 79877655444 566788888888887752
Q ss_pred cccccccCCCceeecCcchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCCC-CCCC
Q psy9039 123 SFVFGHMADEGLMNAQAGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNAT-GDPA 201 (251)
Q Consensus 123 ~~~~~~~~~~Gli~~da~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~-g~~~ 201 (251)
. ..+ -..+..++.++.+++|.+ ++.++ + +.++ ++.+...|+|.++||+... ....
T Consensus 143 ~---a~l-----~~~~l~~l~~~a~~lGl~---~lvev------~------t~ee-~~~A~~~Gad~IGv~~r~l~~~~~ 198 (272)
T 3qja_A 143 V---AAL-----EQSVLVSMLDRTESLGMT---ALVEV------H------TEQE-ADRALKAGAKVIGVNARDLMTLDV 198 (272)
T ss_dssp G---GGS-----CHHHHHHHHHHHHHTTCE---EEEEE------S------SHHH-HHHHHHHTCSEEEEESBCTTTCCB
T ss_pred c---ccC-----CHHHHHHHHHHHHHCCCc---EEEEc------C------CHHH-HHHHHHCCCCEEEECCCccccccc
Confidence 1 000 011245566777777752 22111 1 2233 3444456999999998642 2345
Q ss_pred CHHHHHHHHhcC--CCCEEEecCC-ChHhHHHhhc--CCEEEEeceEeecC
Q psy9039 202 DVSQLMSVKNAV--DLPILIGSGV-TSDNVEHYMT--ADALIIGSHFKQGG 247 (251)
Q Consensus 202 ~~~~l~~vr~~~--~~PV~vG~GI-~~~~v~~~~~--ADGvIVGS~~~~~g 247 (251)
+++.+.++++.+ ++|++++||| |++++.++.. |||++|||+|++..
T Consensus 199 dl~~~~~l~~~v~~~~pvVaegGI~t~edv~~l~~~GadgvlVGsal~~a~ 249 (272)
T 3qja_A 199 DRDCFARIAPGLPSSVIRIAESGVRGTADLLAYAGAGADAVLVGEGLVTSG 249 (272)
T ss_dssp CTTHHHHHGGGSCTTSEEEEESCCCSHHHHHHHHHTTCSEEEECHHHHTCS
T ss_pred CHHHHHHHHHhCcccCEEEEECCCCCHHHHHHHHHcCCCEEEEcHHHhCCC
Confidence 677788888876 7999999999 5999999986 99999999997654
No 26
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=99.15 E-value=1.1e-10 Score=105.90 Aligned_cols=141 Identities=16% Similarity=0.306 Sum_probs=99.1
Q ss_pred HHHHHHHHHHHhCCCCccEEEEEee-CCh-HHHHHHHHHcCccceecccccccccCCCceeecCcchhHHHHHhcCCCcc
Q psy9039 77 NMTRLCAEIRKVLPPSVPVGVQILS-GCN-KAALATAQAAGLDFIRAESFVFGHMADEGLMNAQAGPLLRYRKQIGADNV 154 (251)
Q Consensus 77 a~~~~i~~vr~~~~~~~P~Gvn~~~-N~~-~~~~~ia~a~g~~Fir~~~~~~~~~~~~Gli~~da~e~~~~r~~l~~~~i 154 (251)
.+.+.++++|+.++ .|+++|++. |+. ......+...|.+++..+. | ...++.+..++.+ +
T Consensus 50 ~~~~~i~~i~~~~~--~p~gvnl~~~~~~~~~~~~~a~~~g~d~V~~~~---------g----~p~~~i~~l~~~g---~ 111 (332)
T 2z6i_A 50 VVKANIDKIKSLTD--KPFGVNIMLLSPFVEDIVDLVIEEGVKVVTTGA---------G----NPSKYMERFHEAG---I 111 (332)
T ss_dssp HHHHHHHHHHHHCC--SCEEEEECTTSTTHHHHHHHHHHTTCSEEEECS---------S----CGGGTHHHHHHTT---C
T ss_pred HHHHHHHHHHHhcC--CCEEEEecCCCCCHHHHHHHHHHCCCCEEEECC---------C----ChHHHHHHHHHcC---C
Confidence 45677888888877 699999998 442 2446677778888888641 1 1234444444433 3
Q ss_pred hhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCCCCC----CCCHHHHHHHHhcCCCCEEEecCC-ChHhHH
Q psy9039 155 LVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNATGD----PADVSQLMSVKNAVDLPILIGSGV-TSDNVE 229 (251)
Q Consensus 155 ~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~g~----~~~~~~l~~vr~~~~~PV~vG~GI-~~~~v~ 229 (251)
+++..+ ...+.++.+...|+|+++++|..+|. ..++++++++++.+++||++.||| +++++.
T Consensus 112 ~v~~~v-------------~~~~~a~~~~~~GaD~i~v~g~~~GG~~g~~~~~~ll~~i~~~~~iPViaaGGI~~~~~~~ 178 (332)
T 2z6i_A 112 IVIPVV-------------PSVALAKRMEKIGADAVIAEGMEAGGHIGKLTTMTLVRQVATAISIPVIAAGGIADGEGAA 178 (332)
T ss_dssp EEEEEE-------------SSHHHHHHHHHTTCSCEEEECTTSSEECCSSCHHHHHHHHHHHCSSCEEEESSCCSHHHHH
T ss_pred eEEEEe-------------CCHHHHHHHHHcCCCEEEEECCCCCCCCCCccHHHHHHHHHHhcCCCEEEECCCCCHHHHH
Confidence 443211 11234555666799999998764432 344688999999999999999999 599999
Q ss_pred Hhhc--CCEEEEeceEeecCe
Q psy9039 230 HYMT--ADALIIGSHFKQGGR 248 (251)
Q Consensus 230 ~~~~--ADGvIVGS~~~~~g~ 248 (251)
+++. ||||.+||+|..+-.
T Consensus 179 ~al~~GAdgV~vGs~~l~~~e 199 (332)
T 2z6i_A 179 AGFMLGAEAVQVGTRFVVAKE 199 (332)
T ss_dssp HHHHTTCSEEEECHHHHTBTT
T ss_pred HHHHcCCCEEEecHHHhcCcc
Confidence 9886 999999999987643
No 27
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=99.15 E-value=2.3e-10 Score=103.38 Aligned_cols=140 Identities=19% Similarity=0.255 Sum_probs=98.3
Q ss_pred HHHHHHHHHHHHhCCCCccEEEEEeeC-----Ch-HHHHHHHHHcCccceecccccccccCCCceeecCcchhHHHHHhc
Q psy9039 76 ANMTRLCAEIRKVLPPSVPVGVQILSG-----CN-KAALATAQAAGLDFIRAESFVFGHMADEGLMNAQAGPLLRYRKQI 149 (251)
Q Consensus 76 aa~~~~i~~vr~~~~~~~P~Gvn~~~N-----~~-~~~~~ia~a~g~~Fir~~~~~~~~~~~~Gli~~da~e~~~~r~~l 149 (251)
+.+.+.++++|+.++ .|+++|++.| +. ......+...|++++..+. | +..++.+..++.
T Consensus 53 ~~l~~~i~~i~~~~~--~p~~v~l~v~~~~~~~~~~~~~~~~~~~g~d~V~~~~---------g----~p~~~~~~l~~~ 117 (328)
T 2gjl_A 53 EALAAEIARCRELTD--RPFGVNLTLLPTQKPVPYAEYRAAIIEAGIRVVETAG---------N----DPGEHIAEFRRH 117 (328)
T ss_dssp HHHHHHHHHHHHHCS--SCCEEEEEECCCSSCCCHHHHHHHHHHTTCCEEEEEE---------S----CCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhcC--CCeEEEEeccccccCccHHHHHHHHHhcCCCEEEEcC---------C----CcHHHHHHHHHc
Confidence 346677888998877 7999999998 22 2456777778888887531 1 123455544444
Q ss_pred CCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCCCC----C--CCCHHHHHHHHhcCCCCEEEecCC
Q psy9039 150 GADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNATG----D--PADVSQLMSVKNAVDLPILIGSGV 223 (251)
Q Consensus 150 ~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~g----~--~~~~~~l~~vr~~~~~PV~vG~GI 223 (251)
+ ++++..+ +..+.++.+...|+|+++++|...| . ..++++++++++.+++||+++|||
T Consensus 118 g---i~vi~~v-------------~t~~~a~~~~~~GaD~i~v~g~~~GG~~G~~~~~~~~~l~~v~~~~~iPviaaGGI 181 (328)
T 2gjl_A 118 G---VKVIHKC-------------TAVRHALKAERLGVDAVSIDGFECAGHPGEDDIPGLVLLPAAANRLRVPIIASGGF 181 (328)
T ss_dssp T---CEEEEEE-------------SSHHHHHHHHHTTCSEEEEECTTCSBCCCSSCCCHHHHHHHHHTTCCSCEEEESSC
T ss_pred C---CCEEeeC-------------CCHHHHHHHHHcCCCEEEEECCCCCcCCCCccccHHHHHHHHHHhcCCCEEEECCC
Confidence 3 3444211 1123345555679999999875433 2 134688999999899999999999
Q ss_pred -ChHhHHHhhc--CCEEEEeceEeec
Q psy9039 224 -TSDNVEHYMT--ADALIIGSHFKQG 246 (251)
Q Consensus 224 -~~~~v~~~~~--ADGvIVGS~~~~~ 246 (251)
+++++.+++. ||||+|||+|..+
T Consensus 182 ~~~~~v~~al~~GAdgV~vGs~~~~~ 207 (328)
T 2gjl_A 182 ADGRGLVAALALGADAINMGTRFLAT 207 (328)
T ss_dssp CSHHHHHHHHHHTCSEEEESHHHHTS
T ss_pred CCHHHHHHHHHcCCCEEEECHHHHcC
Confidence 6999999886 9999999999765
No 28
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=99.12 E-value=2.7e-11 Score=105.09 Aligned_cols=183 Identities=14% Similarity=0.137 Sum_probs=53.6
Q ss_pred CCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeCChHHHHHHHHHcCccceecc
Q psy9039 43 PPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQILSGCNKAALATAQAAGLDFIRAE 122 (251)
Q Consensus 43 ~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~~~~~~ia~a~g~~Fir~~ 122 (251)
+.+.+.|+ |.|.+.+....... .++ ....++++++.++ +|+.++...++ ......+...|++++...
T Consensus 42 ~~~~~~G~-~~i~v~d~~~~~~~----~~~-----~~~~i~~i~~~~~--ipvi~~Ggi~~-~~~~~~~l~~Gad~V~ig 108 (247)
T 3tdn_A 42 VEVEKRGA-GEILLTSIDRDGTK----SGY-----DTEMIRFVRPLTT--LPIIASGGAGK-MEHFLEAFLRGADKVSIN 108 (247)
T ss_dssp HHHHHTTC-SEEEEEETTTTTCS----SCC-----CHHHHHHHGGGCC--SCEEEESCCCS-HHHHHHHHHTTCSEECCS
T ss_pred HHHHHcCC-CEEEEEecCcccCC----Ccc-----cHHHHHHHHHhCC--CCEEEeCCCCC-HHHHHHHHHcCCCeeehh
Confidence 66778999 99987654321111 111 2467788998888 89999988877 455555667777777652
Q ss_pred cccccccCCCceeecCcchhHHHHHhcCCCcchhhhhhHh-------h-ccCCCCCCcccHHHHHHHhhhccccEEEecC
Q psy9039 123 SFVFGHMADEGLMNAQAGPLLRYRKQIGADNVLVFTDIKK-------K-HSSHAITADVDITETAKAASFFLSDGLIITG 194 (251)
Q Consensus 123 ~~~~~~~~~~Gli~~da~e~~~~r~~l~~~~i~i~a~v~~-------k-~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG 194 (251)
. . ...+...+.+.++.++.+.+.+--|+.. + ++..- .+..+..+.++.+...|+|.+++|+
T Consensus 109 ~----~------~l~dp~~~~~~~~~~g~~~iv~~ld~~~~~~~~~v~~~g~~~-~~~~~~~~~a~~~~~~G~~~i~~t~ 177 (247)
T 3tdn_A 109 T----A------AVENPSLITQIAQTFGSQAVVVAIDAKRVDGEFMVFTYSGKK-NTGILLRDWVVEVEKRGAGEILLTS 177 (247)
T ss_dssp H----H------HHHCTHHHHHHHHHHC----------------------------------------------------
T ss_pred h----H------HhhChHHHHHHHHHhCCCcEEEEEEeccCCCCEEEEECCCcc-cCCCCHHHHHHHHHhcCCCEEEEec
Confidence 1 0 1123344566777776433322112210 0 11100 1123444556666667999999998
Q ss_pred CCCCC---CCCHHHHHHHHhcCCCCEEEecCC-ChHhHHHhhc--CCEEEEeceEeecCee
Q psy9039 195 NATGD---PADVSQLMSVKNAVDLPILIGSGV-TSDNVEHYMT--ADALIIGSHFKQGGRT 249 (251)
Q Consensus 195 ~~~g~---~~~~~~l~~vr~~~~~PV~vG~GI-~~~~v~~~~~--ADGvIVGS~~~~~g~~ 249 (251)
..... ..+++.++++++.+++||++.||| +++++.+++. |||++|||+|..+-.+
T Consensus 178 ~~~~g~~~g~~~~~~~~i~~~~~iPvia~GGI~~~~d~~~~~~~Gad~v~vg~al~~~p~~ 238 (247)
T 3tdn_A 178 IDRDGTKSGYDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLRGADKVSINTAAVENPSL 238 (247)
T ss_dssp -------------------------------------------------------------
T ss_pred ccCCCCcCCCCHHHHHHHHHhCCCCEEEECCCCCHHHHHHHHHcCCcHhhccHHHHcCcHH
Confidence 53322 235678899999999999999999 5999999996 9999999999876543
No 29
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=99.08 E-value=6.4e-11 Score=100.54 Aligned_cols=188 Identities=15% Similarity=0.173 Sum_probs=110.3
Q ss_pred eecccccccCCCCCCCcchHHHHHHHHHhhCCCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCC
Q psy9039 12 MHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPP 91 (251)
Q Consensus 12 ~~~~p~~~~~pG~P~~~~~~~~i~~~a~~~a~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~ 91 (251)
+.+.|++.+ +|+ ....+.+ +.+.++|+ |.+.+--+- -+|..-...|+ ..++++|+.++
T Consensus 4 ~~~~~~i~a--~D~--~~~~~~~--------~~~~~~G~-~~i~~~~~d-g~~~~~~~~g~-------~~i~~i~~~~~- 61 (220)
T 2fli_A 4 LKIAPSILA--ADY--ANFASEL--------ARIEETDA-EYVHIDIMD-GQFVPNISFGA-------DVVASMRKHSK- 61 (220)
T ss_dssp CEEEEBGGG--SCG--GGHHHHH--------HHHHHTTC-CEEEEEEEB-SSSSSCBCBCH-------HHHHHHHTTCC-
T ss_pred cEEEEEEEe--CCH--HHHHHHH--------HHHHHcCC-CEEEEEeec-CCCCCccccCH-------HHHHHHHHhCC-
Confidence 346799999 887 2223344 44567899 987653222 23332222343 45667787776
Q ss_pred CccEEEEEeeCChHHHHHHHHHcCccceecccccccccCCCceeecCcchhHHHHHhcCCCcchhhhhhHhhccCCCCCC
Q psy9039 92 SVPVGVQILSGCNKAALATAQAAGLDFIRAESFVFGHMADEGLMNAQAGPLLRYRKQIGADNVLVFTDIKKKHSSHAITA 171 (251)
Q Consensus 92 ~~P~Gvn~~~N~~~~~~~ia~a~g~~Fir~~~~~~~~~~~~Gli~~da~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~ 171 (251)
.|+.+.++.|++......+...|++++...... .....+..+..++.+. ++.-.+.+. ++
T Consensus 62 -~~~~v~l~v~d~~~~i~~~~~~gad~v~vh~~~----------~~~~~~~~~~~~~~g~---~i~~~~~~~------t~ 121 (220)
T 2fli_A 62 -LVFDCHLMVVDPERYVEAFAQAGADIMTIHTES----------TRHIHGALQKIKAAGM---KAGVVINPG------TP 121 (220)
T ss_dssp -SEEEEEEESSSGGGGHHHHHHHTCSEEEEEGGG----------CSCHHHHHHHHHHTTS---EEEEEECTT------SC
T ss_pred -CCEEEEEeecCHHHHHHHHHHcCCCEEEEccCc----------cccHHHHHHHHHHcCC---cEEEEEcCC------CC
Confidence 699999998875445677778888888753100 0122334454444443 232112111 22
Q ss_pred cccHHHHHHHhhhccccEEEe--cC-CCCCCC--C-CHHHHHHHHhcC-----CCCEEEecCCChHhHHHhhc--CCEEE
Q psy9039 172 DVDITETAKAASFFLSDGLII--TG-NATGDP--A-DVSQLMSVKNAV-----DLPILIGSGVTSDNVEHYMT--ADALI 238 (251)
Q Consensus 172 ~~~i~~~a~~a~~~~~D~v~V--TG-~~~g~~--~-~~~~l~~vr~~~-----~~PV~vG~GI~~~~v~~~~~--ADGvI 238 (251)
.+.+... ..++|.+.+ ++ ...|.. + ..+.++++|+.. ++|+++.|||+++|+.++.+ |||++
T Consensus 122 ~e~~~~~-----~~~~d~vl~~~~~~g~~g~~~~~~~~~~i~~~~~~~~~~~~~~~i~v~GGI~~~~~~~~~~~Gad~vv 196 (220)
T 2fli_A 122 ATALEPL-----LDLVDQVLIMTVNPGFGGQAFIPECLEKVATVAKWRDEKGLSFDIEVDGGVDNKTIRACYEAGANVFV 196 (220)
T ss_dssp GGGGGGG-----TTTCSEEEEESSCTTCSSCCCCGGGHHHHHHHHHHHHHTTCCCEEEEESSCCTTTHHHHHHHTCCEEE
T ss_pred HHHHHHH-----HhhCCEEEEEEECCCCcccccCHHHHHHHHHHHHHHHhcCCCceEEEECcCCHHHHHHHHHcCCCEEE
Confidence 2222111 134777633 21 112221 1 236677777655 79999999999999999886 99999
Q ss_pred EeceEeec
Q psy9039 239 IGSHFKQG 246 (251)
Q Consensus 239 VGS~~~~~ 246 (251)
|||++.+.
T Consensus 197 vGsai~~~ 204 (220)
T 2fli_A 197 AGSYLFKA 204 (220)
T ss_dssp ESHHHHTS
T ss_pred EChHHhCC
Confidence 99998764
No 30
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=99.04 E-value=6.2e-10 Score=102.24 Aligned_cols=71 Identities=27% Similarity=0.445 Sum_probs=56.4
Q ss_pred HHHHhhhccccEEEecCCCC----CCC----------CC-HHHHHHHHhcCCCCEEEecCC-ChHhHHHhhc--CCEEEE
Q psy9039 178 TAKAASFFLSDGLIITGNAT----GDP----------AD-VSQLMSVKNAVDLPILIGSGV-TSDNVEHYMT--ADALII 239 (251)
Q Consensus 178 ~a~~a~~~~~D~v~VTG~~~----g~~----------~~-~~~l~~vr~~~~~PV~vG~GI-~~~~v~~~~~--ADGvIV 239 (251)
.++.+...|+|+++++|... +.. .. +++++++++.+++||++.||| +++++.+++. ||||.+
T Consensus 157 ~a~~a~~~GaD~i~v~g~~~GGh~g~~~~~~~~~~~~~~~~~~l~~i~~~~~iPViaaGGI~~~~~~~~~l~~GAd~V~v 236 (369)
T 3bw2_A 157 EARAVEAAGADAVIAQGVEAGGHQGTHRDSSEDDGAGIGLLSLLAQVREAVDIPVVAAGGIMRGGQIAAVLAAGADAAQL 236 (369)
T ss_dssp HHHHHHHTTCSEEEEECTTCSEECCCSSCCGGGTTCCCCHHHHHHHHHHHCSSCEEEESSCCSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHcCCCEEEEeCCCcCCcCCCcccccccccccccHHHHHHHHHHhcCceEEEECCCCCHHHHHHHHHcCCCEEEE
Confidence 35666667999999976432 211 23 678899998889999999999 8999999986 999999
Q ss_pred eceEeecCe
Q psy9039 240 GSHFKQGGR 248 (251)
Q Consensus 240 GS~~~~~g~ 248 (251)
||+|..+-+
T Consensus 237 Gs~~~~~~e 245 (369)
T 3bw2_A 237 GTAFLATDE 245 (369)
T ss_dssp SHHHHTSTT
T ss_pred ChHHhCCcc
Confidence 999986543
No 31
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=99.03 E-value=1.6e-10 Score=99.74 Aligned_cols=177 Identities=12% Similarity=0.142 Sum_probs=112.6
Q ss_pred CCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeCChHHHHHHHHHcCccceecc
Q psy9039 43 PPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQILSGCNKAALATAQAAGLDFIRAE 122 (251)
Q Consensus 43 ~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~~~~~~ia~a~g~~Fir~~ 122 (251)
+.+.++|+ |.|.+.+... ..+ ..+ .....+++++ .++ +|+.++...++ ......+...|++.+...
T Consensus 37 ~~~~~~Ga-d~i~v~d~~~---~~~-~~~-----~~~~~i~~i~-~~~--ipvi~~Ggi~~-~~~~~~~~~~Gad~V~lg 102 (241)
T 1qo2_A 37 EKLIEEGF-TLIHVVDLSN---AIE-NSG-----ENLPVLEKLS-EFA--EHIQIGGGIRS-LDYAEKLRKLGYRRQIVS 102 (241)
T ss_dssp HHHHHTTC-CCEEEEEHHH---HHH-CCC-----TTHHHHHHGG-GGG--GGEEEESSCCS-HHHHHHHHHTTCCEEEEC
T ss_pred HHHHHcCC-CEEEEecccc---ccc-CCc-----hhHHHHHHHH-hcC--CcEEEECCCCC-HHHHHHHHHCCCCEEEEC
Confidence 66778999 9998643210 000 001 1245667777 667 89999999988 555555666777666542
Q ss_pred cccccccCCCceeecCcchhHHHHHhcCCCcchhhhhhH---h-hccCCCCCCcccHHHHHHHhhhccccEEEecCCCC-
Q psy9039 123 SFVFGHMADEGLMNAQAGPLLRYRKQIGADNVLVFTDIK---K-KHSSHAITADVDITETAKAASFFLSDGLIITGNAT- 197 (251)
Q Consensus 123 ~~~~~~~~~~Gli~~da~e~~~~r~~l~~~~i~i~a~v~---~-k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~- 197 (251)
. . ...+...+.+. ++++ +.+.+-.++. + .||..- .++.+..+.++.+...|++.+++|+...
T Consensus 103 ----~-----~-~l~~p~~~~~~-~~~g-~~i~~~~d~~~~~v~~~g~~~-~~~~~~~e~~~~~~~~G~~~i~~t~~~~~ 169 (241)
T 1qo2_A 103 ----S-----K-VLEDPSFLKSL-REID-VEPVFSLDTRGGRVAFKGWLA-EEEIDPVSLLKRLKEYGLEEIVHTEIEKD 169 (241)
T ss_dssp ----H-----H-HHHCTTHHHHH-HTTT-CEEEEEEEEETTEECCTTCSS-CSCCCHHHHHHHHHTTTCCEEEEEETTHH
T ss_pred ----c-----h-HhhChHHHHHH-HHcC-CcEEEEEEecCCEEEECCcee-cCCCCHHHHHHHHHhCCCCEEEEEeeccc
Confidence 0 0 11223345555 6666 3433322221 0 122111 1223556667777778999999988532
Q ss_pred C--CCCCHHHHHHHHhcCCCCEEEecCC-ChHhHHHhh-------c-CCEEEEeceEeec
Q psy9039 198 G--DPADVSQLMSVKNAVDLPILIGSGV-TSDNVEHYM-------T-ADALIIGSHFKQG 246 (251)
Q Consensus 198 g--~~~~~~~l~~vr~~~~~PV~vG~GI-~~~~v~~~~-------~-ADGvIVGS~~~~~ 246 (251)
+ ...+++.++++++.+++||+++||| +++++.+++ . |||++|||+|.+.
T Consensus 170 g~~~g~~~~~i~~l~~~~~iPvia~GGI~~~~d~~~~~~~~~~~~G~adgv~vgsal~~~ 229 (241)
T 1qo2_A 170 GTLQEHDFSLTKKIAIEAEVKVLAAGGISSENSLKTAQKVHTETNGLLKGVIVGRAFLEG 229 (241)
T ss_dssp HHTCCCCHHHHHHHHHHHTCEEEEESSCCSHHHHHHHHHHHHHTTTSEEEEEECHHHHTT
T ss_pred ccCCcCCHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHhcccccCCeEeEEEeeHHHHcC
Confidence 2 2347899999999999999999999 589999886 3 7999999999764
No 32
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=99.03 E-value=1.3e-09 Score=98.61 Aligned_cols=140 Identities=18% Similarity=0.296 Sum_probs=98.9
Q ss_pred HHHHHHHHHHHHhCCCCccEEEEEee-CCh-HHHHHHHHHcCccceecccccccccCCCceeecCcchhHHHHHhcCCCc
Q psy9039 76 ANMTRLCAEIRKVLPPSVPVGVQILS-GCN-KAALATAQAAGLDFIRAESFVFGHMADEGLMNAQAGPLLRYRKQIGADN 153 (251)
Q Consensus 76 aa~~~~i~~vr~~~~~~~P~Gvn~~~-N~~-~~~~~ia~a~g~~Fir~~~~~~~~~~~~Gli~~da~e~~~~r~~l~~~~ 153 (251)
+.+.+.++++|+.++ .|+++|++. |+. ...+.++...|++++..+. | +..++.+..++.+
T Consensus 63 ~~l~~~i~~i~~~~~--~p~gVnl~~~~~~~~~~~~~~~~~g~d~V~l~~---------g----~p~~~~~~l~~~g--- 124 (326)
T 3bo9_A 63 DDLRKAISELRQKTD--KPFGVNIILVSPWADDLVKVCIEEKVPVVTFGA---------G----NPTKYIRELKENG--- 124 (326)
T ss_dssp HHHHHHHHHHHTTCS--SCEEEEEETTSTTHHHHHHHHHHTTCSEEEEES---------S----CCHHHHHHHHHTT---
T ss_pred HHHHHHHHHHHHhcC--CCEEEEEeccCCCHHHHHHHHHHCCCCEEEECC---------C----CcHHHHHHHHHcC---
Confidence 447778889998876 699999998 332 3456777778888888531 1 1234444444443
Q ss_pred chhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCCCCC----CCCHHHHHHHHhcCCCCEEEecCC-ChHhH
Q psy9039 154 VLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNATGD----PADVSQLMSVKNAVDLPILIGSGV-TSDNV 228 (251)
Q Consensus 154 i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~g~----~~~~~~l~~vr~~~~~PV~vG~GI-~~~~v 228 (251)
++++.. .+..+.++.+...|+|+++++|...|. ..+++.+.++++.+++||++.||| +++++
T Consensus 125 ~~v~~~-------------v~s~~~a~~a~~~GaD~i~v~g~~~GG~~G~~~~~~ll~~i~~~~~iPviaaGGI~~~~dv 191 (326)
T 3bo9_A 125 TKVIPV-------------VASDSLARMVERAGADAVIAEGMESGGHIGEVTTFVLVNKVSRSVNIPVIAAGGIADGRGM 191 (326)
T ss_dssp CEEEEE-------------ESSHHHHHHHHHTTCSCEEEECTTSSEECCSSCHHHHHHHHHHHCSSCEEEESSCCSHHHH
T ss_pred CcEEEE-------------cCCHHHHHHHHHcCCCEEEEECCCCCccCCCccHHHHHHHHHHHcCCCEEEECCCCCHHHH
Confidence 344421 112334555666799999998754332 345688999998889999999999 59999
Q ss_pred HHhhc--CCEEEEeceEeec
Q psy9039 229 EHYMT--ADALIIGSHFKQG 246 (251)
Q Consensus 229 ~~~~~--ADGvIVGS~~~~~ 246 (251)
.+++. ||||.|||+|...
T Consensus 192 ~~al~~GA~gV~vGs~~~~~ 211 (326)
T 3bo9_A 192 AAAFALGAEAVQMGTRFVAS 211 (326)
T ss_dssp HHHHHHTCSEEEESHHHHTB
T ss_pred HHHHHhCCCEEEechHHHcC
Confidence 99986 9999999998754
No 33
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=98.98 E-value=5.6e-10 Score=96.31 Aligned_cols=177 Identities=17% Similarity=0.172 Sum_probs=114.8
Q ss_pred CCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeCChHHHHHHHHHcCccceecc
Q psy9039 43 PPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQILSGCNKAALATAQAAGLDFIRAE 122 (251)
Q Consensus 43 ~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~~~~~~ia~a~g~~Fir~~ 122 (251)
+.+.++|+ |.|.+-++.+. |.... .. ..++++++.++ +|+-++...++ ......+...|++.+...
T Consensus 39 ~~~~~~Ga-d~i~v~~~d~~-~~~~~--------~~-~~i~~i~~~~~--ipv~v~ggI~~-~~~~~~~l~~Gad~V~lg 104 (244)
T 1vzw_A 39 LAWQRSGA-EWLHLVDLDAA-FGTGD--------NR-ALIAEVAQAMD--IKVELSGGIRD-DDTLAAALATGCTRVNLG 104 (244)
T ss_dssp HHHHHTTC-SEEEEEEHHHH-HTSCC--------CH-HHHHHHHHHCS--SEEEEESSCCS-HHHHHHHHHTTCSEEEEC
T ss_pred HHHHHcCC-CEEEEecCchh-hcCCC--------hH-HHHHHHHHhcC--CcEEEECCcCC-HHHHHHHHHcCCCEEEEC
Confidence 56678999 99988654321 21100 14 67788888888 89999988887 455666677788877653
Q ss_pred cccccccCCCceeecCcchhHHHHHhcCCCcchhhhhhH----hhccCCCCCCcccHHHHHHHhhhccccEEEecCCCCC
Q psy9039 123 SFVFGHMADEGLMNAQAGPLLRYRKQIGADNVLVFTDIK----KKHSSHAITADVDITETAKAASFFLSDGLIITGNATG 198 (251)
Q Consensus 123 ~~~~~~~~~~Gli~~da~e~~~~r~~l~~~~i~i~a~v~----~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~g 198 (251)
. . ..++...+.+.++.+| ..+.+--++. ..|+..- .+. +..+.++.+...|+|.+++|+...+
T Consensus 105 ~----~------~l~~p~~~~~~~~~~g-~~~~~~l~~~~g~v~~~g~~~-~~~-~~~e~~~~~~~~G~~~i~~~~~~~~ 171 (244)
T 1vzw_A 105 T----A------ALETPEWVAKVIAEHG-DKIAVGLDVRGTTLRGRGWTR-DGG-DLYETLDRLNKEGCARYVVTDIAKD 171 (244)
T ss_dssp H----H------HHHCHHHHHHHHHHHG-GGEEEEEEEETTEECCSSSCC-CCC-BHHHHHHHHHHTTCCCEEEEEC---
T ss_pred c----h------HhhCHHHHHHHHHHcC-CcEEEEEEccCCEEEEcCccc-CCC-CHHHHHHHHHhCCCCEEEEeccCcc
Confidence 1 1 1123344566666665 2222211111 0122211 111 5566667776679999999885443
Q ss_pred C---CCCHHHHHHHHhcCCCCEEEecCCC-hHhHHHhhc-----CCEEEEeceEeec
Q psy9039 199 D---PADVSQLMSVKNAVDLPILIGSGVT-SDNVEHYMT-----ADALIIGSHFKQG 246 (251)
Q Consensus 199 ~---~~~~~~l~~vr~~~~~PV~vG~GI~-~~~v~~~~~-----ADGvIVGS~~~~~ 246 (251)
. ..+++.++++++.+++||++.|||+ ++++.++++ |||++|||+|..+
T Consensus 172 ~~~~g~~~~~~~~i~~~~~ipvia~GGI~~~~d~~~~~~~~~~Gadgv~vG~al~~~ 228 (244)
T 1vzw_A 172 GTLQGPNLELLKNVCAATDRPVVASGGVSSLDDLRAIAGLVPAGVEGAIVGKALYAK 228 (244)
T ss_dssp ----CCCHHHHHHHHHTCSSCEEEESCCCSHHHHHHHHTTGGGTEEEEEECHHHHTT
T ss_pred cccCCCCHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHhhccCCCceeeeeHHHHcC
Confidence 2 3468899999999999999999995 799998873 6999999998764
No 34
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=98.95 E-value=5.8e-09 Score=87.73 Aligned_cols=67 Identities=16% Similarity=0.175 Sum_probs=51.3
Q ss_pred HHhhhccccEEEecC-----CCCCC-CCCHHHHHHHHhcCCCCEEEecCCChHhHHHhhc--CCEEEEeceEeec
Q psy9039 180 KAASFFLSDGLIITG-----NATGD-PADVSQLMSVKNAVDLPILIGSGVTSDNVEHYMT--ADALIIGSHFKQG 246 (251)
Q Consensus 180 ~~a~~~~~D~v~VTG-----~~~g~-~~~~~~l~~vr~~~~~PV~vG~GI~~~~v~~~~~--ADGvIVGS~~~~~ 246 (251)
..+...|+|++.+++ .+.+. ...++.++++++..++|++++|||+++|+.+++. +||++|||+|.+.
T Consensus 122 ~~~~~~g~d~i~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~pvia~GGI~~~nv~~~~~~Ga~gv~vgs~i~~~ 196 (215)
T 1xi3_A 122 LEAEKKGADYLGAGSVFPTKTKEDARVIGLEGLRKIVESVKIPVVAIGGINKDNAREVLKTGVDGIAVISAVMGA 196 (215)
T ss_dssp HHHHHHTCSEEEEECSSCC----CCCCCHHHHHHHHHHHCSSCEEEESSCCTTTHHHHHTTTCSEEEESHHHHTS
T ss_pred HHHHhcCCCEEEEcCCccCCCCCCCCCcCHHHHHHHHHhCCCCEEEECCcCHHHHHHHHHcCCCEEEEhHHHhCC
Confidence 344446899998743 33332 2346888999888899999999999999999886 9999999998754
No 35
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=98.94 E-value=7.3e-09 Score=91.75 Aligned_cols=69 Identities=13% Similarity=0.189 Sum_probs=55.2
Q ss_pred HHHHHhhhccccEEEecCCCCCCCCCHHHHHHHHhcC--CCCEEEecCC-ChHhHHHhhc--CCEEEEeceEeecC
Q psy9039 177 ETAKAASFFLSDGLIITGNATGDPADVSQLMSVKNAV--DLPILIGSGV-TSDNVEHYMT--ADALIIGSHFKQGG 247 (251)
Q Consensus 177 ~~a~~a~~~~~D~v~VTG~~~g~~~~~~~l~~vr~~~--~~PV~vG~GI-~~~~v~~~~~--ADGvIVGS~~~~~g 247 (251)
..++.+..+|...+-.-++. .....+.++++++.+ ++||++|||| |++++++++. ||+|+|||++++++
T Consensus 190 aYa~~gad~G~~lV~LD~~~--~~v~~e~V~~I~~~~~~~iPV~vGGGIrs~Eda~~ll~aGAD~VVVGSAav~d~ 263 (286)
T 3vk5_A 190 RYLHVARAFGFHMVYLYSRN--EHVPPEVVRHFRKGLGPDQVLFVSGNVRSGRQVTEYLDSGADYVGFAGALEQPD 263 (286)
T ss_dssp HHHHHHHHTTCSEEEEECSS--SCCCHHHHHHHHHHSCTTCEEEEESSCCSHHHHHHHHHTTCSEEEESGGGSSTT
T ss_pred HHHHHHHHcCCCEEEEcCCC--CcCCHHHHHHHHHhcCCCCCEEEEeCCCCHHHHHHHHHcCCCEEEECchhhcCC
Confidence 44445545566666665443 455679999999999 8999999999 7999999995 99999999999885
No 36
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=98.93 E-value=1e-09 Score=93.67 Aligned_cols=161 Identities=13% Similarity=0.150 Sum_probs=93.7
Q ss_pred CCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeCCh-HHHHHHHHHcCccceeccccc
Q psy9039 47 PVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQILSGCN-KAALATAQAAGLDFIRAESFV 125 (251)
Q Consensus 47 ~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~-~~~~~ia~a~g~~Fir~~~~~ 125 (251)
++|+ |.+++ |+||... .|+ .+++++|+.+++ .|+.+.+..++. ......+...|++|+-.....
T Consensus 29 ~~~v-d~ie~----g~~~~~~--~G~-------~~i~~lr~~~~~-~~i~ld~~l~d~p~~~~~~~~~aGad~i~vh~~~ 93 (218)
T 3jr2_A 29 ASYV-DVIEV----GTILAFA--EGM-------KAVSTLRHNHPN-HILVCDMKTTDGGAILSRMAFEAGADWITVSAAA 93 (218)
T ss_dssp GGGC-SEEEE----CHHHHHH--HTT-------HHHHHHHHHCTT-SEEEEEEEECSCHHHHHHHHHHHTCSEEEEETTS
T ss_pred cCCc-eEEEe----CcHHHHh--cCH-------HHHHHHHHhCCC-CcEEEEEeecccHHHHHHHHHhcCCCEEEEecCC
Confidence 4589 99974 7777543 343 467888887543 488877776652 222344445666666543111
Q ss_pred ccccCCCceeecCcchhHHHHHhcCCCcch-hhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEe-cCCCC---CCC
Q psy9039 126 FGHMADEGLMNAQAGPLLRYRKQIGADNVL-VFTDIKKKHSSHAITADVDITETAKAASFFLSDGLII-TGNAT---GDP 200 (251)
Q Consensus 126 ~~~~~~~Gli~~da~e~~~~r~~l~~~~i~-i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~V-TG~~~---g~~ 200 (251)
+ .....++.+..++.|..... ++. +. +.. .++.+...|+|.+++ +|... |..
T Consensus 94 ~---------~~~~~~~~~~~~~~g~~~~~d~l~--------~~-----T~~-~~~~~~~~g~d~v~~~~~~~~~~~g~~ 150 (218)
T 3jr2_A 94 H---------IATIAACKKVADELNGEIQIEIYG--------NW-----TMQ-DAKAWVDLGITQAIYHRSRDAELAGIG 150 (218)
T ss_dssp C---------HHHHHHHHHHHHHHTCEEEEECCS--------SC-----CHH-HHHHHHHTTCCEEEEECCHHHHHHTCC
T ss_pred C---------HHHHHHHHHHHHHhCCccceeeee--------cC-----CHH-HHHHHHHcCccceeeeeccccccCCCc
Confidence 0 00123344445555542111 221 11 222 233333348887654 44321 232
Q ss_pred CCHHHHHHHHhc--CCCCEEEecCCChHhHHHhhc--CCEEEEeceEee
Q psy9039 201 ADVSQLMSVKNA--VDLPILIGSGVTSDNVEHYMT--ADALIIGSHFKQ 245 (251)
Q Consensus 201 ~~~~~l~~vr~~--~~~PV~vG~GI~~~~v~~~~~--ADGvIVGS~~~~ 245 (251)
-..+.++++|+. .++|++++|||+++|+.++++ ||+++|||++.+
T Consensus 151 ~~~~~l~~i~~~~~~~~pi~v~GGI~~~~~~~~~~aGAd~vvvGsaI~~ 199 (218)
T 3jr2_A 151 WTTDDLDKMRQLSALGIELSITGGIVPEDIYLFEGIKTKTFIAGRALAG 199 (218)
T ss_dssp SCHHHHHHHHHHHHTTCEEEEESSCCGGGGGGGTTSCEEEEEESGGGSH
T ss_pred CCHHHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHcCCCEEEEchhhcC
Confidence 234555666655 389999999999999999996 999999999864
No 37
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=98.93 E-value=3.1e-09 Score=90.41 Aligned_cols=151 Identities=18% Similarity=0.194 Sum_probs=105.0
Q ss_pred CCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeCChHHHHHHHHHcCccceecc
Q psy9039 43 PPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQILSGCNKAALATAQAAGLDFIRAE 122 (251)
Q Consensus 43 ~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~~~~~~ia~a~g~~Fir~~ 122 (251)
+++.++|+ +.|++ .+..+ . ..+.++++|+ .+ ..+|..+..+ ......|.+.|++|+...
T Consensus 32 ~~l~~gGv-~~iel------~~k~~-----~----~~~~i~~~~~-~~--~~~gag~vl~--~d~~~~A~~~GAd~v~~~ 90 (207)
T 2yw3_A 32 RVLEEEGV-GALEI------TLRTE-----K----GLEALKALRK-SG--LLLGAGTVRS--PKEAEAALEAGAAFLVSP 90 (207)
T ss_dssp HHHHHTTC-CEEEE------ECSST-----H----HHHHHHHHTT-SS--CEEEEESCCS--HHHHHHHHHHTCSEEEES
T ss_pred HHHHHcCC-CEEEE------eCCCh-----H----HHHHHHHHhC-CC--CEEEeCeEee--HHHHHHHHHcCCCEEEcC
Confidence 66788999 99986 34433 1 2345566666 33 5788887664 467888999999998742
Q ss_pred cccccccCCCceeecCcchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCCCCCCC-
Q psy9039 123 SFVFGHMADEGLMNAQAGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNATGDPA- 201 (251)
Q Consensus 123 ~~~~~~~~~~Gli~~da~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~g~~~- 201 (251)
+ ...++.+.+++++.+ ++- |.+ +..+ +..|...|+|++.+-. ....
T Consensus 91 ----------~----~d~~v~~~~~~~g~~---~i~------G~~------t~~e-~~~A~~~Gad~v~~fp---a~~~g 137 (207)
T 2yw3_A 91 ----------G----LLEEVAALAQARGVP---YLP------GVL------TPTE-VERALALGLSALKFFP---AEPFQ 137 (207)
T ss_dssp ----------S----CCHHHHHHHHHHTCC---EEE------EEC------SHHH-HHHHHHTTCCEEEETT---TTTTT
T ss_pred ----------C----CCHHHHHHHHHhCCC---EEe------cCC------CHHH-HHHHHHCCCCEEEEec---Ccccc
Confidence 0 124566777777752 210 111 2333 4555557999998832 1222
Q ss_pred CHHHHHHHHhcC-CCCEEEecCCChHhHHHhhc--CCEEEEeceEeecCe
Q psy9039 202 DVSQLMSVKNAV-DLPILIGSGVTSDNVEHYMT--ADALIIGSHFKQGGR 248 (251)
Q Consensus 202 ~~~~l~~vr~~~-~~PV~vG~GI~~~~v~~~~~--ADGvIVGS~~~~~g~ 248 (251)
..+.++++++.. ++|++.-|||+++|+.+++. ||++.|||+|.. ++
T Consensus 138 G~~~lk~l~~~~~~ipvvaiGGI~~~n~~~~l~aGa~~vavgSai~~-~d 186 (207)
T 2yw3_A 138 GVRVLRAYAEVFPEVRFLPTGGIKEEHLPHYAALPNLLAVGGSWLLQ-GN 186 (207)
T ss_dssp HHHHHHHHHHHCTTCEEEEBSSCCGGGHHHHHTCSSBSCEEESGGGS-SC
T ss_pred CHHHHHHHHhhCCCCcEEEeCCCCHHHHHHHHhCCCcEEEEehhhhC-CC
Confidence 357889999887 89999999999999999997 999999999876 44
No 38
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=98.91 E-value=1.4e-09 Score=91.46 Aligned_cols=175 Identities=14% Similarity=0.131 Sum_probs=98.6
Q ss_pred CCCcchHHHHHHHHHhhCCCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEE--EEeeC
Q psy9039 25 PEITANMTRLCAEIRKVLPPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGV--QILSG 102 (251)
Q Consensus 25 P~~~~~~~~i~~~a~~~a~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gv--n~~~N 102 (251)
|+.+...+.+ +.+.+ |+ |.++| +.||+.+ .||. .++++|+.+++ .|+-+ +++ |
T Consensus 10 ~~~~~~~~~~--------~~~~~-~v-~~iev----~~~~~~~--~g~~-------~i~~l~~~~~~-~~i~~~l~~~-d 64 (207)
T 3ajx_A 10 LSTEAALELA--------GKVAE-YV-DIIEL----GTPLIKA--EGLS-------VITAVKKAHPD-KIVFADMKTM-D 64 (207)
T ss_dssp SCHHHHHHHH--------HHHGG-GC-SEEEE----CHHHHHH--HCTH-------HHHHHHHHSTT-SEEEEEEEEC-S
T ss_pred CCHHHHHHHH--------HHhhc-cC-CEEEE----CcHHHHh--hCHH-------HHHHHHHhCCC-CeEEEEEEec-C
Confidence 5555555555 66777 89 99976 6776532 5655 46777777632 57665 543 4
Q ss_pred ChHHHHHHHHHcCccceecccccccccCCCceeecCcchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHh
Q psy9039 103 CNKAALATAQAAGLDFIRAESFVFGHMADEGLMNAQAGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAA 182 (251)
Q Consensus 103 ~~~~~~~ia~a~g~~Fir~~~~~~~~~~~~Gli~~da~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a 182 (251)
.+......+...|++++......+ + ....++.++.++.+.. +-+ .+ ++ . .+..+.++.+
T Consensus 65 i~~~~~~~a~~~Gad~v~vh~~~~----~-----~~~~~~~~~~~~~g~~-~gv--~~---~s-----~-~~p~~~~~~~ 123 (207)
T 3ajx_A 65 AGELEADIAFKAGADLVTVLGSAD----D-----STIAGAVKAAQAHNKG-VVV--DL---IG-----I-EDKATRAQEV 123 (207)
T ss_dssp CHHHHHHHHHHTTCSEEEEETTSC----H-----HHHHHHHHHHHHHTCE-EEE--EC---TT-----C-SSHHHHHHHH
T ss_pred ccHHHHHHHHhCCCCEEEEeccCC----h-----HHHHHHHHHHHHcCCc-eEE--EE---ec-----C-CChHHHHHHH
Confidence 233335667778888876431111 0 0122344444444542 111 01 01 1 0122223333
Q ss_pred hhccccEE-Ee---cCCCCCCCCCHHHHHHHHhcCCCCEEEecCCChHhHHHhhc--CCEEEEeceEeec
Q psy9039 183 SFFLSDGL-II---TGNATGDPADVSQLMSVKNAVDLPILIGSGVTSDNVEHYMT--ADALIIGSHFKQG 246 (251)
Q Consensus 183 ~~~~~D~v-~V---TG~~~g~~~~~~~l~~vr~~~~~PV~vG~GI~~~~v~~~~~--ADGvIVGS~~~~~ 246 (251)
...++|.+ .. ++...|.....+.++++++. ++|+++.|||+++|+.++++ ||+++|||++.+.
T Consensus 124 ~~~g~d~v~~~~~~~~~~~g~~~~~~~i~~~~~~-~~pi~v~GGI~~~~~~~~~~aGad~vvvGsaI~~~ 192 (207)
T 3ajx_A 124 RALGAKFVEMHAGLDEQAKPGFDLNGLLAAGEKA-RVPFSVAGGVKVATIPAVQKAGAEVAVAGGAIYGA 192 (207)
T ss_dssp HHTTCSEEEEECCHHHHTSTTCCTHHHHHHHHHH-TSCEEEESSCCGGGHHHHHHTTCSEEEESHHHHTS
T ss_pred HHhCCCEEEEEecccccccCCCchHHHHHHhhCC-CCCEEEECCcCHHHHHHHHHcCCCEEEEeeeccCC
Confidence 33478888 33 32223332211445544443 79999999999999999886 9999999998653
No 39
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=98.91 E-value=3.3e-09 Score=89.63 Aligned_cols=151 Identities=14% Similarity=0.133 Sum_probs=99.4
Q ss_pred CCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEE--EEeeCChHHHHHHHHHcCcccee
Q psy9039 43 PPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGV--QILSGCNKAALATAQAAGLDFIR 120 (251)
Q Consensus 43 ~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gv--n~~~N~~~~~~~ia~a~g~~Fir 120 (251)
+.+.++|+ |.|++.+. ++ . ..+.++++++.++ .|+-+ ....+ ......+...|++|+.
T Consensus 26 ~~~~~~G~-~~i~l~~~------~~-----~----~~~~i~~i~~~~~--~~l~vg~g~~~~--~~~i~~a~~~Gad~V~ 85 (212)
T 2v82_A 26 GAVIDAGF-DAVEIPLN------SP-----Q----WEQSIPAIVDAYG--DKALIGAGTVLK--PEQVDALARMGCQLIV 85 (212)
T ss_dssp HHHHHHTC-CEEEEETT------ST-----T----HHHHHHHHHHHHT--TTSEEEEECCCS--HHHHHHHHHTTCCEEE
T ss_pred HHHHHCCC-CEEEEeCC------Ch-----h----HHHHHHHHHHhCC--CCeEEEeccccC--HHHHHHHHHcCCCEEE
Confidence 56778999 99987322 11 1 1245566666555 45433 44443 3467888889999987
Q ss_pred cccccccccCCCceeecCcchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCCCCCC
Q psy9039 121 AESFVFGHMADEGLMNAQAGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNATGDP 200 (251)
Q Consensus 121 ~~~~~~~~~~~~Gli~~da~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~g~~ 200 (251)
.. . ...++.+.+++++. +++. +.+ +..+ +..+...|+|++.+-- + ..
T Consensus 86 ~~----~----------~~~~~~~~~~~~g~---~~~~------g~~------t~~e-~~~a~~~G~d~v~v~~--t-~~ 132 (212)
T 2v82_A 86 TP----N----------IHSEVIRRAVGYGM---TVCP------GCA------TATE-AFTALEAGAQALKIFP--S-SA 132 (212)
T ss_dssp CS----S----------CCHHHHHHHHHTTC---EEEC------EEC------SHHH-HHHHHHTTCSEEEETT--H-HH
T ss_pred eC----C----------CCHHHHHHHHHcCC---CEEe------ecC------CHHH-HHHHHHCCCCEEEEec--C-CC
Confidence 32 1 12346677888775 2221 111 2233 3445557899998721 1 12
Q ss_pred CCHHHHHHHHhcCC--CCEEEecCCChHhHHHhhc--CCEEEEeceEeec
Q psy9039 201 ADVSQLMSVKNAVD--LPILIGSGVTSDNVEHYMT--ADALIIGSHFKQG 246 (251)
Q Consensus 201 ~~~~~l~~vr~~~~--~PV~vG~GI~~~~v~~~~~--ADGvIVGS~~~~~ 246 (251)
..++.++++++..+ +||++.|||+++|+.+++. |||++|||+|.+.
T Consensus 133 ~g~~~~~~l~~~~~~~ipvia~GGI~~~~i~~~~~~Ga~gv~vGsai~~~ 182 (212)
T 2v82_A 133 FGPQYIKALKAVLPSDIAVFAVGGVTPENLAQWIDAGCAGAGLGSDLYRA 182 (212)
T ss_dssp HCHHHHHHHHTTSCTTCEEEEESSCCTTTHHHHHHHTCSEEEECTTTCCT
T ss_pred CCHHHHHHHHHhccCCCeEEEeCCCCHHHHHHHHHcCCCEEEEChHHhCC
Confidence 24688899988875 9999999999999999986 9999999999874
No 40
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=98.90 E-value=2.5e-09 Score=92.02 Aligned_cols=178 Identities=18% Similarity=0.169 Sum_probs=116.0
Q ss_pred CCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeCChHHHHHHHHHcCccceecc
Q psy9039 43 PPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQILSGCNKAALATAQAAGLDFIRAE 122 (251)
Q Consensus 43 ~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~~~~~~ia~a~g~~Fir~~ 122 (251)
+.+.++|+ |.|.+-.+.+. |.. .+ .. ..++++++.++ +|+-++...++ ......+...|++.+...
T Consensus 38 ~~~~~~Ga-d~i~v~~~d~~-~~~----~~----~~-~~i~~i~~~~~--ipv~v~ggi~~-~~~~~~~l~~Gad~V~lg 103 (244)
T 2y88_A 38 LGWQRDGA-EWIHLVDLDAA-FGR----GS----NH-ELLAEVVGKLD--VQVELSGGIRD-DESLAAALATGCARVNVG 103 (244)
T ss_dssp HHHHHTTC-SEEEEEEHHHH-TTS----CC----CH-HHHHHHHHHCS--SEEEEESSCCS-HHHHHHHHHTTCSEEEEC
T ss_pred HHHHHcCC-CEEEEEcCccc-ccC----CC----hH-HHHHHHHHhcC--CcEEEECCCCC-HHHHHHHHHcCCCEEEEC
Confidence 46788999 99998654321 211 11 13 67788888888 89999988877 455666677888887753
Q ss_pred cccccccCCCceeecCcchhHHHHHhcCCCcchhhhhhH-------hh-ccCCCCCCcccHHHHHHHhhhccccEEEecC
Q psy9039 123 SFVFGHMADEGLMNAQAGPLLRYRKQIGADNVLVFTDIK-------KK-HSSHAITADVDITETAKAASFFLSDGLIITG 194 (251)
Q Consensus 123 ~~~~~~~~~~Gli~~da~e~~~~r~~l~~~~i~i~a~v~-------~k-~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG 194 (251)
. . ...+...+.+.++.++. .+.+--++. ++ |+.. ....+..+.++.+...|+|.+++|+
T Consensus 104 ~----~------~l~~p~~~~~~~~~~g~-~~~~~ld~~~~~~~~~v~~~g~~--~~~~~~~e~~~~~~~~G~~~i~~~~ 170 (244)
T 2y88_A 104 T----A------ALENPQWCARVIGEHGD-QVAVGLDVQIIDGEHRLRGRGWE--TDGGDLWDVLERLDSEGCSRFVVTD 170 (244)
T ss_dssp H----H------HHHCHHHHHHHHHHHGG-GEEEEEEEEEETTEEEEEEGGGT--EEEEEHHHHHHHHHHTTCCCEEEEE
T ss_pred c----h------HhhChHHHHHHHHHcCC-CEEEEEeccccCCCCEEEECCcc--CCCCCHHHHHHHHHhCCCCEEEEEe
Confidence 1 1 11233445566666652 221111111 00 1111 0011456666777767999999988
Q ss_pred CCCC---CCCCHHHHHHHHhcCCCCEEEecCCC-hHhHHHhhc-----CCEEEEeceEeecC
Q psy9039 195 NATG---DPADVSQLMSVKNAVDLPILIGSGVT-SDNVEHYMT-----ADALIIGSHFKQGG 247 (251)
Q Consensus 195 ~~~g---~~~~~~~l~~vr~~~~~PV~vG~GI~-~~~v~~~~~-----ADGvIVGS~~~~~g 247 (251)
...+ ...+++.++++++.+++||++.|||+ ++++.+++. |||++|||+|..+.
T Consensus 171 ~~~~~~~~g~~~~~~~~l~~~~~ipvia~GGI~~~~d~~~~~~~~~~Gad~v~vG~al~~~~ 232 (244)
T 2y88_A 171 ITKDGTLGGPNLDLLAGVADRTDAPVIASGGVSSLDDLRAIATLTHRGVEGAIVGKALYARR 232 (244)
T ss_dssp TTTTTTTSCCCHHHHHHHHTTCSSCEEEESCCCSHHHHHHHHTTGGGTEEEEEECHHHHTTS
T ss_pred cCCccccCCCCHHHHHHHHHhCCCCEEEECCCCCHHHHHHHHhhccCCCCEEEEcHHHHCCC
Confidence 5432 23478899999998999999999995 799998873 69999999987653
No 41
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=98.89 E-value=9.9e-09 Score=87.98 Aligned_cols=176 Identities=14% Similarity=0.219 Sum_probs=106.8
Q ss_pred cCCCCCCCc-c--hHHHHHHHHHhhCCCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccE-
Q psy9039 20 EAESGPEIT-A--NMTRLCAEIRKVLPPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPV- 95 (251)
Q Consensus 20 ~~pG~P~~~-~--~~~~i~~~a~~~a~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~- 95 (251)
+.++.|.+. . ++..+. +++.++|+ +++.+- +| ..++++|+.++ +|+
T Consensus 24 ~~~~~p~~~~~~~~~~~~a-------~~~~~~G~-~~i~~~-------------~~-------~~i~~i~~~~~--~p~i 73 (234)
T 1yxy_A 24 ALPGEPLYSETGGIMPLMA-------KAAQEAGA-VGIRAN-------------SV-------RDIKEIQAITD--LPII 73 (234)
T ss_dssp CCTTSTTCCTTCCSHHHHH-------HHHHHHTC-SEEEEE-------------SH-------HHHHHHHTTCC--SCEE
T ss_pred CCCCCCCcCCccchHHHHH-------HHHHHCCC-cEeecC-------------CH-------HHHHHHHHhCC--CCEE
Confidence 445677775 2 444443 55667899 999751 22 34778888887 798
Q ss_pred EEE--------EeeCChHHHHHHHHHcCccceecccccccccCCCceeecCcchhHHHHHhcCCCcchhhhhhHhhccCC
Q psy9039 96 GVQ--------ILSGCNKAALATAQAAGLDFIRAESFVFGHMADEGLMNAQAGPLLRYRKQIGADNVLVFTDIKKKHSSH 167 (251)
Q Consensus 96 Gvn--------~~~N~~~~~~~ia~a~g~~Fir~~~~~~~~~~~~Gli~~da~e~~~~r~~l~~~~i~i~a~v~~k~~~~ 167 (251)
+++ ++.+.+......+...|++++........ ..+|. ...++.+..++.. .+..++.+ .
T Consensus 74 ~~~~~~~~~~~~~i~~~~~~i~~~~~~Gad~V~l~~~~~~--~~~~~---~~~~~i~~i~~~~-~~~~v~~~------~- 140 (234)
T 1yxy_A 74 GIIKKDYPPQEPFITATMTEVDQLAALNIAVIAMDCTKRD--RHDGL---DIASFIRQVKEKY-PNQLLMAD------I- 140 (234)
T ss_dssp EECBCCCTTSCCCBSCSHHHHHHHHTTTCSEEEEECCSSC--CTTCC---CHHHHHHHHHHHC-TTCEEEEE------C-
T ss_pred eeEcCCCCccccccCChHHHHHHHHHcCCCEEEEcccccC--CCCCc---cHHHHHHHHHHhC-CCCeEEEe------C-
Confidence 332 23333355667777888888875321100 00000 1133444444332 13333321 1
Q ss_pred CCCCcccHHHHHHHhhhccccEE--EecCCCCC----CCCCHHHHHHHHhcCCCCEEEecCCC-hHhHHHhhc--CCEEE
Q psy9039 168 AITADVDITETAKAASFFLSDGL--IITGNATG----DPADVSQLMSVKNAVDLPILIGSGVT-SDNVEHYMT--ADALI 238 (251)
Q Consensus 168 ~~~~~~~i~~~a~~a~~~~~D~v--~VTG~~~g----~~~~~~~l~~vr~~~~~PV~vG~GI~-~~~v~~~~~--ADGvI 238 (251)
.+.+ .++.+...|+|.+ .++|...+ ...+++.++++++. ++||++.|||+ ++++.+++. ||+++
T Consensus 141 -----~t~~-ea~~a~~~Gad~i~~~v~g~~~~~~~~~~~~~~~i~~~~~~-~ipvia~GGI~s~~~~~~~~~~Gad~v~ 213 (234)
T 1yxy_A 141 -----STFD-EGLVAHQAGIDFVGTTLSGYTPYSRQEAGPDVALIEALCKA-GIAVIAEGKIHSPEEAKKINDLGVAGIV 213 (234)
T ss_dssp -----SSHH-HHHHHHHTTCSEEECTTTTSSTTSCCSSSCCHHHHHHHHHT-TCCEEEESCCCSHHHHHHHHTTCCSEEE
T ss_pred -----CCHH-HHHHHHHcCCCEEeeeccccCCCCcCCCCCCHHHHHHHHhC-CCCEEEECCCCCHHHHHHHHHCCCCEEE
Confidence 1222 3555556799999 45554322 23457889999888 99999999995 999999996 99999
Q ss_pred EeceEee
Q psy9039 239 IGSHFKQ 245 (251)
Q Consensus 239 VGS~~~~ 245 (251)
+||+|.+
T Consensus 214 vGsal~~ 220 (234)
T 1yxy_A 214 VGGAITR 220 (234)
T ss_dssp ECHHHHC
T ss_pred EchHHhC
Confidence 9998754
No 42
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=98.87 E-value=4.4e-09 Score=91.09 Aligned_cols=156 Identities=17% Similarity=0.232 Sum_probs=111.6
Q ss_pred CCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeCChHHHHHHHHHcCccceecc
Q psy9039 43 PPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQILSGCNKAALATAQAAGLDFIRAE 122 (251)
Q Consensus 43 ~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~~~~~~ia~a~g~~Fir~~ 122 (251)
++|.++|+ +.|+| +|+.|. -.+.++++|+.+++ .-+|.-...+ ..+...|...|++|+-..
T Consensus 53 ~al~~gGi-~~iEv------t~~t~~---------a~e~I~~l~~~~~~-~~iGaGTVlt--~~~a~~Ai~AGA~fIvsP 113 (232)
T 4e38_A 53 KVLAENGL-PAAEI------TFRSDA---------AVEAIRLLRQAQPE-MLIGAGTILN--GEQALAAKEAGATFVVSP 113 (232)
T ss_dssp HHHHHTTC-CEEEE------ETTSTT---------HHHHHHHHHHHCTT-CEEEEECCCS--HHHHHHHHHHTCSEEECS
T ss_pred HHHHHCCC-CEEEE------eCCCCC---------HHHHHHHHHHhCCC-CEEeECCcCC--HHHHHHHHHcCCCEEEeC
Confidence 77899999 99986 777662 23567778887764 3678777664 567888889999998742
Q ss_pred cccccccCCCceeecCcchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCCCCCCCC
Q psy9039 123 SFVFGHMADEGLMNAQAGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNATGDPAD 202 (251)
Q Consensus 123 ~~~~~~~~~~Gli~~da~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~g~~~~ 202 (251)
+ ...++.+++++.+. .++. +......+..|...|+|.+-+.=... ...
T Consensus 114 ----------~----~~~~vi~~~~~~gi---~~ip-------------Gv~TptEi~~A~~~Gad~vK~FPa~~--~gG 161 (232)
T 4e38_A 114 ----------G----FNPNTVRACQEIGI---DIVP-------------GVNNPSTVEAALEMGLTTLKFFPAEA--SGG 161 (232)
T ss_dssp ----------S----CCHHHHHHHHHHTC---EEEC-------------EECSHHHHHHHHHTTCCEEEECSTTT--TTH
T ss_pred ----------C----CCHHHHHHHHHcCC---CEEc-------------CCCCHHHHHHHHHcCCCEEEECcCcc--ccC
Confidence 1 13457777777654 3321 12223345666667999998753321 123
Q ss_pred HHHHHHHHhcC-CCCEEEecCCChHhHHHhhc--CCEEEEeceEee-----cCee
Q psy9039 203 VSQLMSVKNAV-DLPILIGSGVTSDNVEHYMT--ADALIIGSHFKQ-----GGRT 249 (251)
Q Consensus 203 ~~~l~~vr~~~-~~PV~vG~GI~~~~v~~~~~--ADGvIVGS~~~~-----~g~~ 249 (251)
.+.|+.++.-. ++|++.-|||+++|+.++++ ++++++||++.. +|+|
T Consensus 162 ~~~lkal~~p~p~ip~~ptGGI~~~n~~~~l~aGa~~~vgGs~l~~~~~i~~~~~ 216 (232)
T 4e38_A 162 ISMVKSLVGPYGDIRLMPTGGITPSNIDNYLAIPQVLACGGTWMVDKKLVTNGEW 216 (232)
T ss_dssp HHHHHHHHTTCTTCEEEEBSSCCTTTHHHHHTSTTBCCEEECGGGCHHHHHTTCH
T ss_pred HHHHHHHHHHhcCCCeeeEcCCCHHHHHHHHHCCCeEEEECchhcChHHhhcCCH
Confidence 68899999875 79999999999999999997 899999999863 4665
No 43
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=98.82 E-value=2.6e-09 Score=89.79 Aligned_cols=155 Identities=17% Similarity=0.192 Sum_probs=102.4
Q ss_pred CCCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeCChHHHHHHHHHcCccceec
Q psy9039 42 LPPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQILSGCNKAALATAQAAGLDFIRA 121 (251)
Q Consensus 42 a~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~~~~~~ia~a~g~~Fir~ 121 (251)
++.+.++|+ |.|++-.. .|+ ..+.++++|+.++...++|+....| ......|...|++|+ .
T Consensus 28 ~~~~~~~G~-~~iev~~~--~~~-------------~~~~i~~ir~~~~~~~~ig~~~v~~--~~~~~~a~~~Gad~i-v 88 (205)
T 1wa3_A 28 ALAVFEGGV-HLIEITFT--VPD-------------ADTVIKELSFLKEKGAIIGAGTVTS--VEQCRKAVESGAEFI-V 88 (205)
T ss_dssp HHHHHHTTC-CEEEEETT--STT-------------HHHHHHHTHHHHHTTCEEEEESCCS--HHHHHHHHHHTCSEE-E
T ss_pred HHHHHHCCC-CEEEEeCC--Chh-------------HHHHHHHHHHHCCCCcEEEecccCC--HHHHHHHHHcCCCEE-E
Confidence 466788999 99986321 221 1345677777653115888865444 345566677899998 4
Q ss_pred ccccccccCCCceeecCcchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCCCCCCC
Q psy9039 122 ESFVFGHMADEGLMNAQAGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNATGDPA 201 (251)
Q Consensus 122 ~~~~~~~~~~~Gli~~da~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~g~~~ 201 (251)
.. + + ..++.++.++.+. .++. +.+ +.. .++.+...|+|.+.+..... .
T Consensus 89 ~~---------~-~---~~~~~~~~~~~g~---~vi~------g~~------t~~-e~~~a~~~Gad~vk~~~~~~---~ 136 (205)
T 1wa3_A 89 SP---------H-L---DEEISQFCKEKGV---FYMP------GVM------TPT-ELVKAMKLGHTILKLFPGEV---V 136 (205)
T ss_dssp CS---------S-C---CHHHHHHHHHHTC---EEEC------EEC------SHH-HHHHHHHTTCCEEEETTHHH---H
T ss_pred cC---------C-C---CHHHHHHHHHcCC---cEEC------CcC------CHH-HHHHHHHcCCCEEEEcCccc---c
Confidence 21 1 1 1356677777654 3332 111 222 24555567999987754211 1
Q ss_pred CHHHHHHHHhcC-CCCEEEecCCChHhHHHhhc--CCEEEEeceEeecCe
Q psy9039 202 DVSQLMSVKNAV-DLPILIGSGVTSDNVEHYMT--ADALIIGSHFKQGGR 248 (251)
Q Consensus 202 ~~~~l~~vr~~~-~~PV~vG~GI~~~~v~~~~~--ADGvIVGS~~~~~g~ 248 (251)
..+.++++++.. ++|+++.|||+++|+.+++. ||+++|||+|.+ ++
T Consensus 137 g~~~~~~l~~~~~~~pvia~GGI~~~~~~~~~~~Ga~~v~vGs~i~~-~d 185 (205)
T 1wa3_A 137 GPQFVKAMKGPFPNVKFVPTGGVNLDNVCEWFKAGVLAVGVGSALVK-GT 185 (205)
T ss_dssp HHHHHHHHHTTCTTCEEEEBSSCCTTTHHHHHHHTCSCEEECHHHHC-SC
T ss_pred CHHHHHHHHHhCCCCcEEEcCCCCHHHHHHHHHCCCCEEEECccccC-CC
Confidence 357788888887 89999999999999999996 999999999987 44
No 44
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=98.82 E-value=7.9e-09 Score=90.09 Aligned_cols=68 Identities=12% Similarity=0.143 Sum_probs=52.1
Q ss_pred HHHhhhccccEEEec-----CCCCCC-CCCHHHHHHHHhc--CCCCEEEecCCChHhHHHhhc--CCEEEEeceEeec
Q psy9039 179 AKAASFFLSDGLIIT-----GNATGD-PADVSQLMSVKNA--VDLPILIGSGVTSDNVEHYMT--ADALIIGSHFKQG 246 (251)
Q Consensus 179 a~~a~~~~~D~v~VT-----G~~~g~-~~~~~~l~~vr~~--~~~PV~vG~GI~~~~v~~~~~--ADGvIVGS~~~~~ 246 (251)
++.|...|+|++++. .++.+. +..++.++++++. .++||++-||||++|+.+++. |||+.|||+|.+.
T Consensus 148 a~~A~~~GaDyI~vgpvf~T~tK~~~~~~gl~~l~~~~~~~~~~iPvvAiGGI~~~ni~~~~~aGa~gvav~sai~~a 225 (243)
T 3o63_A 148 VAAAAAGDADYFCVGPCWPTPTKPGRAAPGLGLVRVAAELGGDDKPWFAIGGINAQRLPAVLDAGARRIVVVRAITSA 225 (243)
T ss_dssp HHHHHHSSCSEEEECCSSCCCC-----CCCHHHHHHHHTC---CCCEEEESSCCTTTHHHHHHTTCCCEEESHHHHTC
T ss_pred HHHHhhCCCCEEEEcCccCCCCCCCcchhhHHHHHHHHHhccCCCCEEEecCCCHHHHHHHHHcCCCEEEEeHHHhCC
Confidence 455555799999983 333332 2357889998887 589999999999999999996 9999999998753
No 45
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=98.81 E-value=8.7e-09 Score=91.25 Aligned_cols=166 Identities=14% Similarity=0.079 Sum_probs=112.6
Q ss_pred CCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeCChHHHHHHHHHcCccceecc
Q psy9039 43 PPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQILSGCNKAALATAQAAGLDFIRAE 122 (251)
Q Consensus 43 ~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~~~~~~ia~a~g~~Fir~~ 122 (251)
+.++++|+ ++|-+-..- +|... ...-++++|+.++ +|+-..-|..+ .++...+.+.|++-+-..
T Consensus 86 ~~y~~~GA-~~IsVltd~--~~f~G----------s~~~L~~ir~~v~--lPVl~Kdfi~d-~~qi~ea~~~GAD~VlLi 149 (272)
T 3tsm_A 86 KAYEEGGA-ACLSVLTDT--PSFQG----------APEFLTAARQACS--LPALRKDFLFD-PYQVYEARSWGADCILII 149 (272)
T ss_dssp HHHHHTTC-SEEEEECCS--TTTCC----------CHHHHHHHHHTSS--SCEEEESCCCS-THHHHHHHHTTCSEEEEE
T ss_pred HHHHHCCC-CEEEEeccc--cccCC----------CHHHHHHHHHhcC--CCEEECCccCC-HHHHHHHHHcCCCEEEEc
Confidence 66889999 999875433 33322 2234577888888 89987777777 567777788888887653
Q ss_pred cccccccCCCceeecCcchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCCC-CCCC
Q psy9039 123 SFVFGHMADEGLMNAQAGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNAT-GDPA 201 (251)
Q Consensus 123 ~~~~~~~~~~Gli~~da~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~-g~~~ 201 (251)
. ..+ -..+..++.++.+.+|. .++.++ | + .+.++.|...++|.++++...- ....
T Consensus 150 ~---a~L-----~~~~l~~l~~~a~~lGl---~~lvev------h------~-~eEl~~A~~~ga~iIGinnr~l~t~~~ 205 (272)
T 3tsm_A 150 M---ASV-----DDDLAKELEDTAFALGM---DALIEV------H------D-EAEMERALKLSSRLLGVNNRNLRSFEV 205 (272)
T ss_dssp T---TTS-----CHHHHHHHHHHHHHTTC---EEEEEE------C------S-HHHHHHHTTSCCSEEEEECBCTTTCCB
T ss_pred c---ccc-----CHHHHHHHHHHHHHcCC---eEEEEe------C------C-HHHHHHHHhcCCCEEEECCCCCccCCC
Confidence 1 001 01235567777778775 222211 1 2 2334556667999999997532 2344
Q ss_pred CHHHHHHHHhcC--CCCEEEecCC-ChHhHHHhhc--CCEEEEeceEeecCe
Q psy9039 202 DVSQLMSVKNAV--DLPILIGSGV-TSDNVEHYMT--ADALIIGSHFKQGGR 248 (251)
Q Consensus 202 ~~~~l~~vr~~~--~~PV~vG~GI-~~~~v~~~~~--ADGvIVGS~~~~~g~ 248 (251)
+++...++.+.. ++|++..||| |++++.++.. |||+.|||+|++..+
T Consensus 206 dl~~~~~L~~~ip~~~~vIaesGI~t~edv~~l~~~Ga~gvLVG~almr~~d 257 (272)
T 3tsm_A 206 NLAVSERLAKMAPSDRLLVGESGIFTHEDCLRLEKSGIGTFLIGESLMRQHD 257 (272)
T ss_dssp CTHHHHHHHHHSCTTSEEEEESSCCSHHHHHHHHTTTCCEEEECHHHHTSSC
T ss_pred ChHHHHHHHHhCCCCCcEEEECCCCCHHHHHHHHHcCCCEEEEcHHHcCCcC
Confidence 667666776665 6999999999 7999999996 999999999987543
No 46
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=98.76 E-value=3.5e-09 Score=117.99 Aligned_cols=153 Identities=12% Similarity=0.179 Sum_probs=93.5
Q ss_pred HHHHHHHHHHHHHHhCCCCccEEEEEeeCChHH---HHHHHHHcCccceecccccccccCCCceeec----CcchhHHHH
Q psy9039 74 ITANMTRLCAEIRKVLPPSVPVGVQILSGCNKA---ALATAQAAGLDFIRAESFVFGHMADEGLMNA----QAGPLLRYR 146 (251)
Q Consensus 74 i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~~~---~~~ia~a~g~~Fir~~~~~~~~~~~~Gli~~----da~e~~~~r 146 (251)
+.+.+.+.++++|+.++...|+++|+++..+.. .++. .+|++.+...+ +..+|++.+ +.++...+.
T Consensus 464 ~~~~l~~~i~~~r~~~~~~~p~~vNl~~~~p~~~~~~~g~-----~~~~~~~~~~g--~~vdgv~~~aG~P~~ee~~~~i 536 (3089)
T 3zen_D 464 TEQIFNDRIAELETLLEPGRAIQFNTLFLDPYLWKLQVGG-----KRLVQRARQSG--APIDGLVVSAGIPDLEEAVDII 536 (3089)
T ss_dssp SHHHHHHHHHHHHHHSCTTCCCEEEEECSCHHHHHHHHHH-----HHHHHHHHHTT--CSCCEEEEESSCCCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhcCCCCceeechhhcChhhhhhccCH-----HHHHHHHHHcC--CCceEEEEeCCCCchhHhHHHH
Confidence 456688899999998832269999998754333 3333 24555431111 225676665 223334444
Q ss_pred HhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhcc------ccEEEecCCCCCCCC---C-HHHH----HHHHhc
Q psy9039 147 KQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFL------SDGLIITGNATGDPA---D-VSQL----MSVKNA 212 (251)
Q Consensus 147 ~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~------~D~v~VTG~~~g~~~---~-~~~l----~~vr~~ 212 (251)
+.+...+++++. +..++ .. .++.+...+ .++++++|.+.|... + ..++ .++|+.
T Consensus 537 ~~l~~~Gi~~i~---------~~~~t--~~-~a~~~~~i~~d~~~~~y~vv~~G~eaGGH~g~~~~~~ll~~~~~~ir~~ 604 (3089)
T 3zen_D 537 DELNEVGISHVV---------FKPGT--VE-QIRSVIRIAAEVPTKPVIVHIEGGRAGGHHSWEDLDDLLLATYSELRSR 604 (3089)
T ss_dssp TSTTHHHHCSEE---------ECCCS--HH-HHHHHHHHHTTSTTSCEEEEECCSSSSEECCSCCHHHHHHHHHHHHTTC
T ss_pred HHHHHcCCEEEE---------EeCCC--HH-HHHHHHHhhhhcCCCcEEEEEeCCCcCCCCCcccHHHHHHHHHHHHhhc
Confidence 444333444431 00111 11 122222223 448999998766432 3 3566 788999
Q ss_pred CCCCEEEecCC-ChHhHHHhh-----------c--CCEEEEeceEee
Q psy9039 213 VDLPILIGSGV-TSDNVEHYM-----------T--ADALIIGSHFKQ 245 (251)
Q Consensus 213 ~~~PV~vG~GI-~~~~v~~~~-----------~--ADGvIVGS~~~~ 245 (251)
+++||++|||| ++++++.++ . ||||+|||+|+.
T Consensus 605 ~~iPViaaGGI~d~~~vaaal~g~ws~~~~~p~lGAdGV~vGTrfl~ 651 (3089)
T 3zen_D 605 SNITICVGGGIGTPERSAEYLSGRWAEVHGYPLMPIDGILVGTAAMA 651 (3089)
T ss_dssp TTEEEEEESSCCCTTTTHHHHHTGGGGTTTCCCCCCSEEECSSTTTT
T ss_pred CCCeEEEEeCCCCHHHHHHHhccccccccCccCCCCCEEEecHHHHh
Confidence 99999999999 799999888 6 999999999974
No 47
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=98.75 E-value=2.7e-08 Score=91.40 Aligned_cols=143 Identities=17% Similarity=0.216 Sum_probs=91.1
Q ss_pred HHHHHHHHHHhCCCCccEEEEEeeCChHHHHHHHHHcCccceecccccccccCCCceeecCcchhHHHHHhcCCCcchhh
Q psy9039 78 MTRLCAEIRKVLPPSVPVGVQILSGCNKAALATAQAAGLDFIRAESFVFGHMADEGLMNAQAGPLLRYRKQIGADNVLVF 157 (251)
Q Consensus 78 ~~~~i~~vr~~~~~~~P~Gvn~~~N~~~~~~~ia~a~g~~Fir~~~~~~~~~~~~Gli~~da~e~~~~r~~l~~~~i~i~ 157 (251)
..+.++++|+... .|+++|+..|+ ......+...|++++..+... |......+.+.+.++.++ ++++
T Consensus 83 ~~~~I~~vk~~~~--~pvga~ig~~~-~e~a~~l~eaGad~I~ld~a~-------G~~~~~~~~i~~i~~~~~---~~Vi 149 (361)
T 3khj_A 83 QVNEVLKVKNSGG--LRVGAAIGVNE-IERAKLLVEAGVDVIVLDSAH-------GHSLNIIRTLKEIKSKMN---IDVI 149 (361)
T ss_dssp HHHHHHHHHHTTC--CCCEEEECTTC-HHHHHHHHHTTCSEEEECCSC-------CSBHHHHHHHHHHHHHCC---CEEE
T ss_pred HHHHHHHHHhccC--ceEEEEeCCCH-HHHHHHHHHcCcCeEEEeCCC-------CCcHHHHHHHHHHHHhcC---CcEE
Confidence 4456778887766 69999999887 566777778889988754211 100000122333444443 3443
Q ss_pred hhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCCCCC-----------CCCHHHHHHHHh---cCCCCEEEecCC
Q psy9039 158 TDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNATGD-----------PADVSQLMSVKN---AVDLPILIGSGV 223 (251)
Q Consensus 158 a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~g~-----------~~~~~~l~~vr~---~~~~PV~vG~GI 223 (251)
. ......+.++.+...|+|++.|++ ..|. .+..+.+.++++ .+++||++.|||
T Consensus 150 v------------g~v~t~e~A~~l~~aGaD~I~VG~-~~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~~iPVIA~GGI 216 (361)
T 3khj_A 150 V------------GNVVTEEATKELIENGADGIKVGI-GPGSICTTRIVAGVGVPQITAIEKCSSVASKFGIPIIADGGI 216 (361)
T ss_dssp E------------EEECSHHHHHHHHHTTCSEEEECS-SCCTTCCHHHHTCBCCCHHHHHHHHHHHHHHHTCCEEEESCC
T ss_pred E------------ccCCCHHHHHHHHHcCcCEEEEec-CCCcCCCcccccCCCCCcHHHHHHHHHHHhhcCCeEEEECCC
Confidence 1 011223456666667999999842 1111 234455665543 358999999999
Q ss_pred -ChHhHHHhhc--CCEEEEeceEeec
Q psy9039 224 -TSDNVEHYMT--ADALIIGSHFKQG 246 (251)
Q Consensus 224 -~~~~v~~~~~--ADGvIVGS~~~~~ 246 (251)
+++++.+++. ||+|.+||+|...
T Consensus 217 ~~~~di~kala~GAd~V~vGs~~~~t 242 (361)
T 3khj_A 217 RYSGDIGKALAVGASSVMIGSILAGT 242 (361)
T ss_dssp CSHHHHHHHHHHTCSEEEESTTTTTB
T ss_pred CCHHHHHHHHHcCCCEEEEChhhhcC
Confidence 7999999886 9999999998653
No 48
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=98.75 E-value=1.9e-08 Score=85.47 Aligned_cols=173 Identities=18% Similarity=0.236 Sum_probs=104.8
Q ss_pred cCCCCCCCcc-hHHHHHHHHHhhCCCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEE
Q psy9039 20 EAESGPEITA-NMTRLCAEIRKVLPPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQ 98 (251)
Q Consensus 20 ~~pG~P~~~~-~~~~i~~~a~~~a~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn 98 (251)
+.+|.|..+. +...+. +++.++|+ +++.+. +| ..++++|+.++ .|+ ++
T Consensus 13 ~~~~~p~~~~~~~~~~a-------~~~~~~Ga-~~i~~~-------------~~-------~~i~~i~~~~~--~pv-~~ 61 (223)
T 1y0e_A 13 ALPDEPLHSSFIMSKMA-------LAAYEGGA-VGIRAN-------------TK-------EDILAIKETVD--LPV-IG 61 (223)
T ss_dssp CCTTSTTCCHHHHHHHH-------HHHHHHTC-SEEEEE-------------SH-------HHHHHHHHHCC--SCE-EE
T ss_pred CCCCCCCCCCccHHHHH-------HHHHHCCC-eeeccC-------------CH-------HHHHHHHHhcC--CCE-Ee
Confidence 3457787773 444442 55678999 999641 22 44778888887 798 32
Q ss_pred Ee----------eCChHHHHHHHHHcCccceecccccccccCCCceeec--CcchhHHHHHhcCCCcchhhhhhHhhccC
Q psy9039 99 IL----------SGCNKAALATAQAAGLDFIRAESFVFGHMADEGLMNA--QAGPLLRYRKQIGADNVLVFTDIKKKHSS 166 (251)
Q Consensus 99 ~~----------~N~~~~~~~ia~a~g~~Fir~~~~~~~~~~~~Gli~~--da~e~~~~r~~l~~~~i~i~a~v~~k~~~ 166 (251)
.. ...+......+...|++++.... .. ...| ...++.+..++.- ++..++. +.
T Consensus 62 ~~~~~~~~~~~~i~~~~~~i~~~~~~Gad~v~l~~----~~----~~~p~~~~~~~i~~~~~~~-~~~~v~~------~~ 126 (223)
T 1y0e_A 62 IVKRDYDHSDVFITATSKEVDELIESQCEVIALDA----TL----QQRPKETLDELVSYIRTHA-PNVEIMA------DI 126 (223)
T ss_dssp ECBCCCTTCCCCBSCSHHHHHHHHHHTCSEEEEEC----SC----SCCSSSCHHHHHHHHHHHC-TTSEEEE------EC
T ss_pred eeccCCCccccccCCcHHHHHHHHhCCCCEEEEee----ec----ccCcccCHHHHHHHHHHhC-CCceEEe------cC
Confidence 22 11224556667778888877531 11 0112 1234444444331 1233321 11
Q ss_pred CCCCCcccHHHHHHHhhhccccEEEecCC-CC----CC---CCCHHHHHHHHhcCCCCEEEecCC-ChHhHHHhhc--CC
Q psy9039 167 HAITADVDITETAKAASFFLSDGLIITGN-AT----GD---PADVSQLMSVKNAVDLPILIGSGV-TSDNVEHYMT--AD 235 (251)
Q Consensus 167 ~~~~~~~~i~~~a~~a~~~~~D~v~VTG~-~~----g~---~~~~~~l~~vr~~~~~PV~vG~GI-~~~~v~~~~~--AD 235 (251)
+ +.++ ++.+...|+|.+.++-. .+ +. .+.++.++++++.+++||++.||| |++++.+++. ||
T Consensus 127 ~------t~~e-~~~~~~~G~d~i~~~~~g~t~~~~~~~~~~~~~~~~~~~~~~~~ipvia~GGI~~~~~~~~~~~~Gad 199 (223)
T 1y0e_A 127 A------TVEE-AKNAARLGFDYIGTTLHGYTSYTQGQLLYQNDFQFLKDVLQSVDAKVIAEGNVITPDMYKRVMDLGVH 199 (223)
T ss_dssp S------SHHH-HHHHHHTTCSEEECTTTTSSTTSTTCCTTHHHHHHHHHHHHHCCSEEEEESSCCSHHHHHHHHHTTCS
T ss_pred C------CHHH-HHHHHHcCCCEEEeCCCcCcCCCCCCCCCcccHHHHHHHHhhCCCCEEEecCCCCHHHHHHHHHcCCC
Confidence 1 2233 45555678999876421 11 11 123467888888889999999999 8999999996 99
Q ss_pred EEEEeceEee
Q psy9039 236 ALIIGSHFKQ 245 (251)
Q Consensus 236 GvIVGS~~~~ 245 (251)
++++||+|.+
T Consensus 200 ~v~vG~al~~ 209 (223)
T 1y0e_A 200 CSVVGGAITR 209 (223)
T ss_dssp EEEECHHHHC
T ss_pred EEEEChHHcC
Confidence 9999999754
No 49
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=98.73 E-value=4.3e-08 Score=84.39 Aligned_cols=150 Identities=13% Similarity=0.176 Sum_probs=102.4
Q ss_pred CCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeCChHHHHHHHHHcCccceecc
Q psy9039 43 PPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQILSGCNKAALATAQAAGLDFIRAE 122 (251)
Q Consensus 43 ~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~~~~~~ia~a~g~~Fir~~ 122 (251)
+++.++|+ +.+++ .+..+ . ..+.++++++.+++ .-+|..+.. . ......|.+.|++|+...
T Consensus 36 ~al~~gGv-~~iel------~~k~~--~-------~~~~i~~l~~~~~~-l~vgaGtvl-~-~d~~~~A~~aGAd~v~~p 96 (224)
T 1vhc_A 36 DTLAKNGL-SVAEI------TFRSE--A-------AADAIRLLRANRPD-FLIAAGTVL-T-AEQVVLAKSSGADFVVTP 96 (224)
T ss_dssp HHHHHTTC-CEEEE------ETTST--T-------HHHHHHHHHHHCTT-CEEEEESCC-S-HHHHHHHHHHTCSEEECS
T ss_pred HHHHHcCC-CEEEE------eccCc--h-------HHHHHHHHHHhCcC-cEEeeCcEe-e-HHHHHHHHHCCCCEEEEC
Confidence 67889999 99986 23333 1 22466777777764 367776654 3 367888899999998632
Q ss_pred cccccccCCCceeecCcchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCCCCCCC-
Q psy9039 123 SFVFGHMADEGLMNAQAGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNATGDPA- 201 (251)
Q Consensus 123 ~~~~~~~~~~Gli~~da~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~g~~~- 201 (251)
+ ...++.+.+++++...+ . |.. +.. .+..|...|+|++.+ -.....
T Consensus 97 ----------~----~d~~v~~~ar~~g~~~i--~-------Gv~------t~~-e~~~A~~~Gad~vk~---Fpa~~~g 143 (224)
T 1vhc_A 97 ----------G----LNPKIVKLCQDLNFPIT--P-------GVN------NPM-AIEIALEMGISAVKF---FPAEASG 143 (224)
T ss_dssp ----------S----CCHHHHHHHHHTTCCEE--C-------EEC------SHH-HHHHHHHTTCCEEEE---TTTTTTT
T ss_pred ----------C----CCHHHHHHHHHhCCCEE--e-------ccC------CHH-HHHHHHHCCCCEEEE---eeCcccc
Confidence 0 12345566666765211 1 111 223 345666679999988 222222
Q ss_pred CHHHHHHHHhcC-CCCEEEecCCChHhHHHhhc---CCEEEEeceEee
Q psy9039 202 DVSQLMSVKNAV-DLPILIGSGVTSDNVEHYMT---ADALIIGSHFKQ 245 (251)
Q Consensus 202 ~~~~l~~vr~~~-~~PV~vG~GI~~~~v~~~~~---ADGvIVGS~~~~ 245 (251)
..+.++++++.. ++|+++-|||+++|+.++++ ++++. ||+|..
T Consensus 144 G~~~lk~l~~~~~~ipvvaiGGI~~~N~~~~l~agga~~v~-gS~i~~ 190 (224)
T 1vhc_A 144 GVKMIKALLGPYAQLQIMPTGGIGLHNIRDYLAIPNIVACG-GSWFVE 190 (224)
T ss_dssp HHHHHHHHHTTTTTCEEEEBSSCCTTTHHHHHTSTTBCCEE-ECGGGC
T ss_pred CHHHHHHHHhhCCCCeEEEECCcCHHHHHHHHhcCCCEEEE-EchhcC
Confidence 368899999988 79999999999999999995 88888 999875
No 50
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=98.72 E-value=3.4e-08 Score=88.39 Aligned_cols=171 Identities=19% Similarity=0.256 Sum_probs=98.4
Q ss_pred CCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeCChHHHHHHHHHcCccceecc
Q psy9039 43 PPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQILSGCNKAALATAQAAGLDFIRAE 122 (251)
Q Consensus 43 ~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~~~~~~ia~a~g~~Fir~~ 122 (251)
+.++++|+ |+|.+-|. +|.......|-. .......++++++.++ +|+.++..... .....++.+.|++++-.
T Consensus 35 ~~~~~~Ga-~~I~~l~p--~~~~~~~~~G~~-~~~~~~~i~~I~~~~~--iPv~~k~r~g~-~~~~~~~~a~GAd~V~~- 106 (305)
T 2nv1_A 35 KIAEEAGA-VAVMALER--VPADIRAAGGVA-RMADPTIVEEVMNAVS--IPVMAKARIGH-IVEARVLEAMGVDYIDE- 106 (305)
T ss_dssp HHHHHTTC-SEEEECCC---------CCCCC-CCCCHHHHHHHHHHCS--SCEEEEECTTC-HHHHHHHHHHTCSEEEE-
T ss_pred HHHHHcCC-CEEEEcCC--CcchhhhccCcc-cCCCHHHHHHHHHhCC--CCEEecccccc-hHHHHHHHHCCCCEEEE-
Confidence 55778999 99954230 111111001100 0001245667777777 79877665432 34456667788888741
Q ss_pred cccccccCCCceeec-CcchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCCCC---
Q psy9039 123 SFVFGHMADEGLMNA-QAGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNATG--- 198 (251)
Q Consensus 123 ~~~~~~~~~~Gli~~-da~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~g--- 198 (251)
... +.+ +..+..+ .++++. .++. +-.+..+. ..+...|+|.+.++|.. |
T Consensus 107 ----~~~-----l~~~~~~~~i~-~~~~g~---~v~~------------~~~~~~e~-~~a~~~Gad~V~~~G~~-g~g~ 159 (305)
T 2nv1_A 107 ----SEV-----LTPADEEFHLN-KNEYTV---PFVC------------GCRDLGEA-TRRIAEGASMLRTKGEP-GTGN 159 (305)
T ss_dssp ----CTT-----SCCSCSSCCCC-GGGCSS---CEEE------------EESSHHHH-HHHHHTTCSEEEECCCT-TSCC
T ss_pred ----ecc-----CCHHHHHHHHH-HhccCC---cEEE------------EeCCHHHH-HHHHHCCCCEEEecccc-Cccc
Confidence 100 111 1112211 122332 2221 11133333 33335689999997732 2
Q ss_pred --------------------------------CCCCHHHHHHHHhcCCCCEE--EecCC-ChHhHHHhhc--CCEEEEec
Q psy9039 199 --------------------------------DPADVSQLMSVKNAVDLPIL--IGSGV-TSDNVEHYMT--ADALIIGS 241 (251)
Q Consensus 199 --------------------------------~~~~~~~l~~vr~~~~~PV~--vG~GI-~~~~v~~~~~--ADGvIVGS 241 (251)
....++.++++++.+++||+ +.||| |++++.+++. |||++|||
T Consensus 160 ~~~~~~h~rt~~~~i~~l~gi~~~~~~~~~~~~~~~~~~i~~i~~~~~iPvi~~a~GGI~~~~d~~~~~~~GadgV~vGs 239 (305)
T 2nv1_A 160 IVEAVRHMRKVNAQVRKVVAMSEDELMTEAKNLGAPYELLLQIKKDGKLPVVNFAAGGVATPADAALMMQLGADGVFVGS 239 (305)
T ss_dssp THHHHHHHHHHHHHHHHHHHSCGGGHHHHHHHHTCCHHHHHHHHHHTSCSSCEEBCSCCCSHHHHHHHHHTTCSCEEECG
T ss_pred hHHHHhhhhhhhccchhhccccchhhhcccccccccHHHHHHHHHhcCCCEEEEeccCCCCHHHHHHHHHcCCCEEEEcH
Confidence 12356788899888899999 99999 8999999986 99999999
Q ss_pred eEeecCe
Q psy9039 242 HFKQGGR 248 (251)
Q Consensus 242 ~~~~~g~ 248 (251)
+|.+.++
T Consensus 240 ai~~~~~ 246 (305)
T 2nv1_A 240 GIFKSDN 246 (305)
T ss_dssp GGGGSSC
T ss_pred HHHcCCC
Confidence 9987654
No 51
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=98.72 E-value=1.4e-08 Score=87.53 Aligned_cols=150 Identities=14% Similarity=0.153 Sum_probs=104.0
Q ss_pred CCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeCChHHHHHHHHHcCccceecc
Q psy9039 43 PPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQILSGCNKAALATAQAAGLDFIRAE 122 (251)
Q Consensus 43 ~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~~~~~~ia~a~g~~Fir~~ 122 (251)
+++.++|+ +.+++ .+..+ . ..+.++++++.+++ .-+|..+..+ ......|.+.|++|+...
T Consensus 45 ~al~~gGv-~~iel------~~k~~-----~----~~~~i~~l~~~~~~-~~igagtvl~--~d~~~~A~~aGAd~v~~p 105 (225)
T 1mxs_A 45 DALAAGGI-RTLEV------TLRSQ-----H----GLKAIQVLREQRPE-LCVGAGTVLD--RSMFAAVEAAGAQFVVTP 105 (225)
T ss_dssp HHHHHTTC-CEEEE------ESSST-----H----HHHHHHHHHHHCTT-SEEEEECCCS--HHHHHHHHHHTCSSEECS
T ss_pred HHHHHCCC-CEEEE------ecCCc-----c----HHHHHHHHHHhCcc-cEEeeCeEee--HHHHHHHHHCCCCEEEeC
Confidence 77889999 99986 23332 1 23356777777764 3677766543 367888899999998742
Q ss_pred cccccccCCCceeecCcchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCCCCCCC-
Q psy9039 123 SFVFGHMADEGLMNAQAGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNATGDPA- 201 (251)
Q Consensus 123 ~~~~~~~~~~Gli~~da~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~g~~~- 201 (251)
+ ...++.+++++++.+.+ . |.+ +.. .+..|...|+|++.+ ......
T Consensus 106 ----------~----~d~~v~~~~~~~g~~~i--~-------G~~------t~~-e~~~A~~~Gad~vk~---FPa~~~~ 152 (225)
T 1mxs_A 106 ----------G----ITEDILEAGVDSEIPLL--P-------GIS------TPS-EIMMGYALGYRRFKL---FPAEISG 152 (225)
T ss_dssp ----------S----CCHHHHHHHHHCSSCEE--C-------EEC------SHH-HHHHHHTTTCCEEEE---TTHHHHT
T ss_pred ----------C----CCHHHHHHHHHhCCCEE--E-------eeC------CHH-HHHHHHHCCCCEEEE---ccCcccc
Confidence 1 23457788888875221 1 111 233 346666689999988 111111
Q ss_pred CHHHHHHHHhcC-CCCEEEecCCChHhHHHhhc---CCEEEEeceEee
Q psy9039 202 DVSQLMSVKNAV-DLPILIGSGVTSDNVEHYMT---ADALIIGSHFKQ 245 (251)
Q Consensus 202 ~~~~l~~vr~~~-~~PV~vG~GI~~~~v~~~~~---ADGvIVGS~~~~ 245 (251)
..+.++++++.. ++|+++-|||+++|+.++++ +|++. ||++..
T Consensus 153 G~~~lk~i~~~~~~ipvvaiGGI~~~N~~~~l~~~Ga~~v~-gSai~~ 199 (225)
T 1mxs_A 153 GVAAIKAFGGPFGDIRFCPTGGVNPANVRNYMALPNVMCVG-TTWMLD 199 (225)
T ss_dssp HHHHHHHHHTTTTTCEEEEBSSCCTTTHHHHHHSTTBCCEE-ECTTSC
T ss_pred CHHHHHHHHhhCCCCeEEEECCCCHHHHHHHHhccCCEEEE-EchhcC
Confidence 257788999888 89999999999999999985 89999 999876
No 52
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=98.70 E-value=7.2e-08 Score=82.39 Aligned_cols=150 Identities=17% Similarity=0.194 Sum_probs=103.8
Q ss_pred CCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeCChHHHHHHHHHcCccceecc
Q psy9039 43 PPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQILSGCNKAALATAQAAGLDFIRAE 122 (251)
Q Consensus 43 ~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~~~~~~ia~a~g~~Fir~~ 122 (251)
+++.++|+ +.+++- +..+ . ..+.++++++.+++. -+|..++.+ ......|.+.|++|+...
T Consensus 35 ~al~~gGv-~~iel~------~k~~--~-------~~~~i~~l~~~~~~~-~vgagtvi~--~d~~~~A~~aGAd~v~~p 95 (214)
T 1wbh_A 35 KALVAGGV-RVLNVT------LRTE--C-------AVDAIRAIAKEVPEA-IVGAGTVLN--PQQLAEVTEAGAQFAISP 95 (214)
T ss_dssp HHHHHTTC-CEEEEE------SCST--T-------HHHHHHHHHHHCTTS-EEEEESCCS--HHHHHHHHHHTCSCEEES
T ss_pred HHHHHcCC-CEEEEe------CCCh--h-------HHHHHHHHHHHCcCC-EEeeCEEEE--HHHHHHHHHcCCCEEEcC
Confidence 67889999 999862 3333 1 123667777777643 566666443 367888899999998742
Q ss_pred cccccccCCCceeecCcchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCCCCCCC-
Q psy9039 123 SFVFGHMADEGLMNAQAGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNATGDPA- 201 (251)
Q Consensus 123 ~~~~~~~~~~Gli~~da~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~g~~~- 201 (251)
+ ...++.+.+++++.+.+ . |.+ +.. .+..|...|+|++.+ ......
T Consensus 96 ----------~----~d~~v~~~~~~~g~~~i--~-------G~~------t~~-e~~~A~~~Gad~v~~---Fpa~~~g 142 (214)
T 1wbh_A 96 ----------G----LTEPLLKAATEGTIPLI--P-------GIS------TVS-ELMLGMDYGLKEFKF---FPAEANG 142 (214)
T ss_dssp ----------S----CCHHHHHHHHHSSSCEE--E-------EES------SHH-HHHHHHHTTCCEEEE---TTTTTTT
T ss_pred ----------C----CCHHHHHHHHHhCCCEE--E-------ecC------CHH-HHHHHHHCCCCEEEE---ecCcccc
Confidence 0 23457788888775221 1 111 223 345666679999988 222222
Q ss_pred CHHHHHHHHhcC-CCCEEEecCCChHhHHHhhc---CCEEEEeceEee
Q psy9039 202 DVSQLMSVKNAV-DLPILIGSGVTSDNVEHYMT---ADALIIGSHFKQ 245 (251)
Q Consensus 202 ~~~~l~~vr~~~-~~PV~vG~GI~~~~v~~~~~---ADGvIVGS~~~~ 245 (251)
..+.++++++.. ++|++.-||||++|+.++++ ++++. ||++..
T Consensus 143 G~~~lk~i~~~~~~ipvvaiGGI~~~n~~~~l~agg~~~v~-gS~i~~ 189 (214)
T 1wbh_A 143 GVKALQAIAGPFSQVRFCPTGGISPANYRDYLALKSVLCIG-GSWLVP 189 (214)
T ss_dssp HHHHHHHHHTTCTTCEEEEBSSCCTTTHHHHHTSTTBSCEE-EGGGSC
T ss_pred CHHHHHHHhhhCCCCeEEEECCCCHHHHHHHHhcCCCeEEE-eccccC
Confidence 368899999888 89999999999999999995 88888 999875
No 53
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=98.69 E-value=4.8e-08 Score=86.84 Aligned_cols=73 Identities=30% Similarity=0.364 Sum_probs=56.8
Q ss_pred cHHHHHHHhhhccccEEEecCCC--------CC----------C--CC----CHHHHHHHHhcCCCCEEEecCC-ChHhH
Q psy9039 174 DITETAKAASFFLSDGLIITGNA--------TG----------D--PA----DVSQLMSVKNAVDLPILIGSGV-TSDNV 228 (251)
Q Consensus 174 ~i~~~a~~a~~~~~D~v~VTG~~--------~g----------~--~~----~~~~l~~vr~~~~~PV~vG~GI-~~~~v 228 (251)
.+.++++.+...|+|++.++|.. +. . +. .++.++++++.+++||++.||| +++++
T Consensus 177 ~~~~~a~~l~~~G~d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g~~~~~~~~~~i~~i~~~~~ipvia~GGI~~~~d~ 256 (311)
T 1ep3_A 177 DIVPIAKAVEAAGADGLTMINTLMGVRFDLKTRQPILANITGGLSGPAIKPVALKLIHQVAQDVDIPIIGMGGVANAQDV 256 (311)
T ss_dssp CSHHHHHHHHHTTCSEEEECCCEEECCBCTTTCSBSSTTSCEEEESGGGHHHHHHHHHHHHTTCSSCEEECSSCCSHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCcccccCcccCCccccCCCCcccCccchHHHHHHHHHHHHhcCCCEEEECCcCCHHHH
Confidence 34566777777899999998731 11 0 01 1367889999999999999999 79999
Q ss_pred HHhhc--CCEEEEeceEeec
Q psy9039 229 EHYMT--ADALIIGSHFKQG 246 (251)
Q Consensus 229 ~~~~~--ADGvIVGS~~~~~ 246 (251)
.+++. ||+|++||+|..+
T Consensus 257 ~~~l~~GAd~V~vg~~~l~~ 276 (311)
T 1ep3_A 257 LEMYMAGASAVAVGTANFAD 276 (311)
T ss_dssp HHHHHHTCSEEEECTHHHHC
T ss_pred HHHHHcCCCEEEECHHHHcC
Confidence 99885 9999999999764
No 54
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=98.67 E-value=4.2e-08 Score=87.88 Aligned_cols=171 Identities=16% Similarity=0.184 Sum_probs=102.3
Q ss_pred CCCcCCCCccEEEEe-ecC-CCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeCChHHHHHHHHHcCcccee
Q psy9039 43 PPSVPVGVQHGVIVE-NMH-DVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQILSGCNKAALATAQAAGLDFIR 120 (251)
Q Consensus 43 ~~l~~~Gv~D~i~ie-N~~-~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~~~~~~ia~a~g~~Fir 120 (251)
+.++++|+ |.|.+- |.- |..|+..+.-+ .....++++|+.++ +|+..-.-... +..+-+..+.|++.+
T Consensus 35 ~~ye~~GA-~~lsvLe~~~~Di~~~~g~~R~-----~~~~~i~~i~~~v~--iPvl~k~~i~~-ide~qil~aaGAD~I- 104 (297)
T 4adt_A 35 KIAEKAGA-IGVMILENIPSELRNTDGVARS-----VDPLKIEEIRKCIS--INVLAKVRIGH-FVEAQILEELKVDML- 104 (297)
T ss_dssp HHHHHHTC-SEEEECCCCC-----CCCCCCC-----CCHHHHHHHHTTCC--SEEEEEEETTC-HHHHHHHHHTTCSEE-
T ss_pred HHHHHcCC-CEEEEecCCCCcchhcCCcccC-----CCHHHHHHHHHhcC--CCEEEeccCCc-HHHHHHHHHcCCCEE-
Confidence 66788999 998762 111 44455421100 13456788999888 89876543333 455666667888887
Q ss_pred cccccccccCCCceeecCcchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCC-CCCC
Q psy9039 121 AESFVFGHMADEGLMNAQAGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGN-ATGD 199 (251)
Q Consensus 121 ~~~~~~~~~~~~Gli~~da~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~-~~g~ 199 (251)
... +++-. .++.+..++... ...+++++ .+.. .+..+...|+|.++++|. .||.
T Consensus 105 d~s--------~~~~~---~~li~~i~~~~~-g~~vvv~v------------~~~~-Ea~~a~~~Gad~I~v~g~~gTG~ 159 (297)
T 4adt_A 105 DES--------EVLTM---ADEYNHINKHKF-KTPFVCGC------------TNLG-EALRRISEGASMIRTKGEAGTGN 159 (297)
T ss_dssp EEE--------TTSCC---SCSSCCCCGGGC-SSCEEEEE------------SSHH-HHHHHHHHTCSEEEECCCTTSCC
T ss_pred EcC--------CCCCH---HHHHHHHHhcCC-CCeEEEEe------------CCHH-HHHHHHhCCCCEEEECCCcCCCc
Confidence 210 11011 112211111111 22333221 1223 344444568999999975 2231
Q ss_pred ---------------------------------CCCHHHHHHHHhcCCCCEE--EecCC-ChHhHHHhhc--CCEEEEec
Q psy9039 200 ---------------------------------PADVSQLMSVKNAVDLPIL--IGSGV-TSDNVEHYMT--ADALIIGS 241 (251)
Q Consensus 200 ---------------------------------~~~~~~l~~vr~~~~~PV~--vG~GI-~~~~v~~~~~--ADGvIVGS 241 (251)
..++++++++++.+++||+ +.||| |++++.+++. |||++|||
T Consensus 160 ~~~~v~h~~~~~~eir~l~~~~~d~L~t~~~~~~~~~~ll~~i~~~~~iPVivvA~GGI~t~~dv~~~~~~GAdgVlVGs 239 (297)
T 4adt_A 160 IIEAIKHIRTVNNEIKYLCSLDESEVYNFAKKLRAPIDLILLTRKLKRLPVVNFAAGGIATPADAAMCMQLGMDGVFVGS 239 (297)
T ss_dssp CHHHHHHHHHHHHHHHHHHHSCTTTHHHHHHHHTCCHHHHHHHHHHTSCSSEEEEESCCCSHHHHHHHHHTTCSCEEESH
T ss_pred hHHHHHHHHHhhhhhhhhccccccccccccccCCCCHHHHHHHHHhcCCCeEEEecCCCCCHHHHHHHHHcCCCEEEEhH
Confidence 3457888999998889997 89999 8999999986 99999999
Q ss_pred eEeecCe
Q psy9039 242 HFKQGGR 248 (251)
Q Consensus 242 ~~~~~g~ 248 (251)
+|.+..+
T Consensus 240 ai~~a~d 246 (297)
T 4adt_A 240 GIFESEN 246 (297)
T ss_dssp HHHTSSC
T ss_pred HHHcCCC
Confidence 9987543
No 55
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=98.66 E-value=2.8e-08 Score=85.13 Aligned_cols=155 Identities=21% Similarity=0.190 Sum_probs=108.1
Q ss_pred CCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeCChHHHHHHHHHcCccceecc
Q psy9039 43 PPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQILSGCNKAALATAQAAGLDFIRAE 122 (251)
Q Consensus 43 ~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~~~~~~ia~a~g~~Fir~~ 122 (251)
++|+++|+ +.|+| +|+.|. -...|+++|+.+++ .-+|.-+..+ ..+...+...|++|+-..
T Consensus 32 ~al~~gGi-~~iEv------t~~t~~---------a~~~I~~l~~~~p~-~~IGAGTVlt--~~~a~~ai~AGA~fivsP 92 (217)
T 3lab_A 32 KALVAGGV-HLLEV------TLRTEA---------GLAAISAIKKAVPE-AIVGAGTVCT--ADDFQKAIDAGAQFIVSP 92 (217)
T ss_dssp HHHHHTTC-CEEEE------ETTSTT---------HHHHHHHHHHHCTT-SEEEEECCCS--HHHHHHHHHHTCSEEEES
T ss_pred HHHHHcCC-CEEEE------eCCCcc---------HHHHHHHHHHHCCC-CeEeeccccC--HHHHHHHHHcCCCEEEeC
Confidence 78999999 99987 777662 33566778888775 3789888875 567777888999998631
Q ss_pred cccccccCCCceeecCcchhHHHHHhcCC---CcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCCCCC
Q psy9039 123 SFVFGHMADEGLMNAQAGPLLRYRKQIGA---DNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNATGD 199 (251)
Q Consensus 123 ~~~~~~~~~~Gli~~da~e~~~~r~~l~~---~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~g~ 199 (251)
+ ...++.+++++++. ..-.++ ++......+..|..+|+|.+-+.=.. .
T Consensus 93 ----------~----~~~evi~~~~~~~v~~~~~~~~~-------------PG~~TptE~~~A~~~Gad~vK~FPa~--~ 143 (217)
T 3lab_A 93 ----------G----LTPELIEKAKQVKLDGQWQGVFL-------------PGVATASEVMIAAQAGITQLKCFPAS--A 143 (217)
T ss_dssp ----------S----CCHHHHHHHHHHHHHCSCCCEEE-------------EEECSHHHHHHHHHTTCCEEEETTTT--T
T ss_pred ----------C----CcHHHHHHHHHcCCCccCCCeEe-------------CCCCCHHHHHHHHHcCCCEEEECccc--c
Confidence 1 13456677766532 000222 22222334566666799999765221 1
Q ss_pred CCCHHHHHHHHhcC-CCCEEEecCCChHhHHHhhc--CCEEEEeceEee
Q psy9039 200 PADVSQLMSVKNAV-DLPILIGSGVTSDNVEHYMT--ADALIIGSHFKQ 245 (251)
Q Consensus 200 ~~~~~~l~~vr~~~-~~PV~vG~GI~~~~v~~~~~--ADGvIVGS~~~~ 245 (251)
....+.++.++.-. ++|++.-|||+++|+.++++ +..++.||++..
T Consensus 144 ~gG~~~lkal~~p~p~i~~~ptGGI~~~N~~~~l~aGa~~~vgGs~l~~ 192 (217)
T 3lab_A 144 IGGAKLLKAWSGPFPDIQFCPTGGISKDNYKEYLGLPNVICAGGSWLTE 192 (217)
T ss_dssp TTHHHHHHHHHTTCTTCEEEEBSSCCTTTHHHHHHSTTBCCEEESGGGC
T ss_pred ccCHHHHHHHHhhhcCceEEEeCCCCHHHHHHHHHCCCEEEEEChhhcC
Confidence 11368899999876 79999999999999999997 888888998863
No 56
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=98.66 E-value=3e-08 Score=85.57 Aligned_cols=169 Identities=17% Similarity=0.179 Sum_probs=105.0
Q ss_pred CCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhC-CCCccEEEEEeeCChHHHHHHHHHcCccceec
Q psy9039 43 PPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVL-PPSVPVGVQILSGCNKAALATAQAAGLDFIRA 121 (251)
Q Consensus 43 ~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~-~~~~P~Gvn~~~N~~~~~~~ia~a~g~~Fir~ 121 (251)
+.+.++|+ |.+.+==+ |-.|...+.-||.+ ++++|+.+ ++ .|+.+-++.|.+......+...|++++..
T Consensus 24 ~~l~~~g~-d~~h~DVm-Dg~Fvpn~~~G~~~-------v~~ir~~~~~~-~~~dvhLmv~~p~~~i~~~~~aGad~itv 93 (228)
T 3ovp_A 24 LRMLDSGA-DYLHLDVM-DGHFVPNITFGHPV-------VESLRKQLGQD-PFFDMHMMVSKPEQWVKPMAVAGANQYTF 93 (228)
T ss_dssp HHHHHTTC-SCEEEEEE-BSSSSSCBCBCHHH-------HHHHHHHHCSS-SCEEEEEECSCGGGGHHHHHHHTCSEEEE
T ss_pred HHHHHcCC-CEEEEEec-CCCcCcccccCHHH-------HHHHHHhhCCC-CcEEEEEEeCCHHHHHHHHHHcCCCEEEE
Confidence 55667889 88865222 33565555567654 55667663 22 69999888887655566666688888886
Q ss_pred ccccccccCCCceeecCcchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCCCCC--
Q psy9039 122 ESFVFGHMADEGLMNAQAGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNATGD-- 199 (251)
Q Consensus 122 ~~~~~~~~~~~Gli~~da~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~g~-- 199 (251)
.... . ....+..+..++.|. .+-+. +++. |+.++++++. ..+|.+.+-....|.
T Consensus 94 H~Ea----~------~~~~~~i~~i~~~G~-k~gva--l~p~------t~~e~l~~~l-----~~~D~Vl~msv~pGf~G 149 (228)
T 3ovp_A 94 HLEA----T------ENPGALIKDIRENGM-KVGLA--IKPG------TSVEYLAPWA-----NQIDMALVMTVEPGFGG 149 (228)
T ss_dssp EGGG----C------SCHHHHHHHHHHTTC-EEEEE--ECTT------SCGGGTGGGG-----GGCSEEEEESSCTTTCS
T ss_pred ccCC----c------hhHHHHHHHHHHcCC-CEEEE--EcCC------CCHHHHHHHh-----ccCCeEEEeeecCCCCC
Confidence 4211 1 123455566666665 11111 2211 3333333221 236776542222221
Q ss_pred ----CCCHHHHHHHHhcC-CCCEEEecCCChHhHHHhhc--CCEEEEeceEee
Q psy9039 200 ----PADVSQLMSVKNAV-DLPILIGSGVTSDNVEHYMT--ADALIIGSHFKQ 245 (251)
Q Consensus 200 ----~~~~~~l~~vr~~~-~~PV~vG~GI~~~~v~~~~~--ADGvIVGS~~~~ 245 (251)
+..+++++++|+.. +.|+.+.|||+++|+.++.+ ||++++||++.+
T Consensus 150 q~f~~~~l~ki~~lr~~~~~~~I~VdGGI~~~t~~~~~~aGAd~~VvGsaIf~ 202 (228)
T 3ovp_A 150 QKFMEDMMPKVHWLRTQFPSLDIEVDGGVGPDTVHKCAEAGANMIVSGSAIMR 202 (228)
T ss_dssp CCCCGGGHHHHHHHHHHCTTCEEEEESSCSTTTHHHHHHHTCCEEEESHHHHT
T ss_pred cccCHHHHHHHHHHHHhcCCCCEEEeCCcCHHHHHHHHHcCCCEEEEeHHHhC
Confidence 22467899999876 69999999999999999986 999999999765
No 57
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G*
Probab=98.66 E-value=6.3e-08 Score=105.19 Aligned_cols=149 Identities=17% Similarity=0.271 Sum_probs=97.9
Q ss_pred HHHHHHHHHHHHHHhCCCCccEEEEEeeCChH------HHHHHHHHcCccc--eecccccccccCCCceeecCcchhHHH
Q psy9039 74 ITANMTRLCAEIRKVLPPSVPVGVQILSGCNK------AALATAQAAGLDF--IRAESFVFGHMADEGLMNAQAGPLLRY 145 (251)
Q Consensus 74 i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~~------~~~~ia~a~g~~F--ir~~~~~~~~~~~~Gli~~da~e~~~~ 145 (251)
+.+.+...++++|+.++...|+|+|++.-.+. ..+..+...|.++ +.. ..| .|..+++.++
T Consensus 619 ~~e~l~~~i~~vk~~~~~~~p~gvN~~~~~p~~~~~~~~~~~~~~~~gv~i~gv~~---------~~G--~p~~e~~~~~ 687 (2060)
T 2uva_G 619 NAQKMSDAISKIEKAIPPGRGITVNLIYVNPRAMGWQIPLLGRLRADGVPIEGLTI---------GAG--VPSIEVANEY 687 (2060)
T ss_dssp SHHHHHHHHHHHGGGSCTTCCEEEEEETTCTTHHHHHHHHHHHHHTTTCCEEEEEE---------ESS--CCCHHHHHHH
T ss_pred CHHHHHHHHHHHHhhcccCCCeEecccccCcccchhHHHHHHHHHHcCCCcceEee---------cCC--CCCHHHHHHH
Confidence 35567788899998872115999999984322 2345555555555 332 112 2333456777
Q ss_pred HHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEE---ecCCCCCCCCC--------HHHHHHHHhcCC
Q psy9039 146 RKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLI---ITGNATGDPAD--------VSQLMSVKNAVD 214 (251)
Q Consensus 146 r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~---VTG~~~g~~~~--------~~~l~~vr~~~~ 214 (251)
-+.++...+.++ + +.....+.+......|+|+++ ++|.++|.... +.++.++|+..+
T Consensus 688 l~~~gi~~i~~v---------~---~~~~a~~~v~~l~~aG~D~iV~~q~~G~eaGGH~g~~d~~~~~l~lv~~i~~~~~ 755 (2060)
T 2uva_G 688 IQTLGIRHISFK---------P---GSVDAIQQVINIAKANPTFPIILQWTGGRGGGHHSFEDFHQPILLMYSRIRKCSN 755 (2060)
T ss_dssp HHHSCCSEEEEC---------C---CSHHHHHHHHHHHHHCTTSCEEEEECCTTSSSSCCSCCSHHHHHHHHHHHHTSTT
T ss_pred HHHcCCeEEEec---------C---CHHHHHHHHHHHHHcCCCEEEEeeeEcccCCCCCCcccccchHHHHHHHHHHHcC
Confidence 777765443332 1 111111111222346999999 99977665432 467889999999
Q ss_pred CCEEEecCC-ChHhHHHhh-----------c--CCEEEEeceEee
Q psy9039 215 LPILIGSGV-TSDNVEHYM-----------T--ADALIIGSHFKQ 245 (251)
Q Consensus 215 ~PV~vG~GI-~~~~v~~~~-----------~--ADGvIVGS~~~~ 245 (251)
+||+++||| +++.+.+++ . ||||.+||.|+-
T Consensus 756 ipviaaGGI~~g~~i~aaltg~ws~~~g~palGAdgV~~GT~f~~ 800 (2060)
T 2uva_G 756 IVLVAGSGFGGSEDTYPYLTGSWSTKFGYPPMPFDGCMFGSRMMT 800 (2060)
T ss_dssp EEEEEESSCCSHHHHHHHHHTCGGGTTTSCCCCCSCEEESGGGGG
T ss_pred CCEEEeCCCCCHHHHHHHhcCcchhhcCCCCCCCCEEEEchhhhc
Confidence 999999999 899999999 5 999999999864
No 58
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=98.65 E-value=9.4e-09 Score=91.48 Aligned_cols=172 Identities=20% Similarity=0.201 Sum_probs=100.4
Q ss_pred CCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeCChHHHHHHHHHcCccceecc
Q psy9039 43 PPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQILSGCNKAALATAQAAGLDFIRAE 122 (251)
Q Consensus 43 ~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~~~~~~ia~a~g~~Fir~~ 122 (251)
+++.++|+ ++|.+ |+ ++|+......|... ......++++++.++ +|+.++.-... ...+..+...|++++. .
T Consensus 35 ~~~~~~Ga-~~i~~-~e-~v~~~~~~~~G~~~-~~~~~~i~~i~~~~~--~Pvi~~~~~~~-~~~~~~~~~aGad~v~-~ 106 (297)
T 2zbt_A 35 VIAEEAGA-VAVMA-LE-RVPADIRAQGGVAR-MSDPKIIKEIMAAVS--IPVMAKVRIGH-FVEAMILEAIGVDFID-E 106 (297)
T ss_dssp HHHHHHTC-SEEEE-CS-SCHHHHHHTTCCCC-CCCHHHHHHHHTTCS--SCEEEEEETTC-HHHHHHHHHTTCSEEE-E
T ss_pred HHHHHCCC-cEEEe-cc-ccchHHHhhcCCcc-CCCHHHHHHHHHhcC--CCeEEEeccCC-HHHHHHHHHCCCCEEe-e
Confidence 56778999 99986 22 34432100000000 001246778888887 79877654443 5667777788888882 1
Q ss_pred cccccccCCCceeecCcchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCCC-----
Q psy9039 123 SFVFGHMADEGLMNAQAGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNAT----- 197 (251)
Q Consensus 123 ~~~~~~~~~~Gli~~da~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~----- 197 (251)
.+. +...++.+..++... .+.+..++ .+.++ +..+...|+|.+.++|...
T Consensus 107 ~~~-----------~~~~~~~~~~~~~~~-~i~l~~~v------------~~~~~-~~~a~~~Gad~I~v~G~~~~g~~~ 161 (297)
T 2zbt_A 107 SEV-----------LTPADEEHHIDKWKF-KVPFVCGA------------RNLGE-ALRRIAEGAAMIRTKGEAGTGNVV 161 (297)
T ss_dssp ETT-----------SCCSCSSCCCCGGGC-SSCEEEEE------------SSHHH-HHHHHHTTCSEEEECCCSSSCCTH
T ss_pred eCC-----------CChHHHHHHHHHhCC-CceEEeec------------CCHHH-HHHHHHcCCCEEEEcccccCcchH
Confidence 110 010111111111111 22222111 12222 3334457899998886310
Q ss_pred --------------------C---------CCCCHHHHHHHHhcCCCCEE--EecCC-ChHhHHHhhc--CCEEEEeceE
Q psy9039 198 --------------------G---------DPADVSQLMSVKNAVDLPIL--IGSGV-TSDNVEHYMT--ADALIIGSHF 243 (251)
Q Consensus 198 --------------------g---------~~~~~~~l~~vr~~~~~PV~--vG~GI-~~~~v~~~~~--ADGvIVGS~~ 243 (251)
+ ....++.++++++.+++|++ +.||| |++++.+++. |||++|||+|
T Consensus 162 e~~~~~~~~~~~i~~~~g~t~~~~~~~~~~~~~~~~~i~~l~~~~~~pvi~~a~GGI~~~e~i~~~~~aGadgvvvGsai 241 (297)
T 2zbt_A 162 EAVRHARTMWKEIRYVQSLREDELMAYAKEIGAPFELVKWVHDHGRLPVVNFAAGGIATPADAALMMHLGMDGVFVGSGI 241 (297)
T ss_dssp HHHHHHHHHHHHHHHHHHSCGGGHHHHHHHHTCCHHHHHHHHHHSSCSSCEEBCSSCCSHHHHHHHHHTTCSEEEECGGG
T ss_pred HHHhhHHHHHHHHHHcCCcCCCCchhhhhcchhhHHHHHHHHHhcCCCcEEEeeCCCCCHHHHHHHHHcCCCEEEEchHH
Confidence 0 12346788899988899998 99999 8999999886 9999999999
Q ss_pred eecC
Q psy9039 244 KQGG 247 (251)
Q Consensus 244 ~~~g 247 (251)
.+.+
T Consensus 242 ~~~~ 245 (297)
T 2zbt_A 242 FKSG 245 (297)
T ss_dssp GGSS
T ss_pred hCCC
Confidence 8543
No 59
>2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G*
Probab=98.65 E-value=4.7e-08 Score=105.83 Aligned_cols=149 Identities=15% Similarity=0.225 Sum_probs=96.6
Q ss_pred HHHHHHHHHHHHHHhCCCCccEEEEEeeCChH------HHHHHHHHcCccc--eecccccccccCCCceeecCcchhHHH
Q psy9039 74 ITANMTRLCAEIRKVLPPSVPVGVQILSGCNK------AALATAQAAGLDF--IRAESFVFGHMADEGLMNAQAGPLLRY 145 (251)
Q Consensus 74 i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~~------~~~~ia~a~g~~F--ir~~~~~~~~~~~~Gli~~da~e~~~~ 145 (251)
+.+.+...|+++|+.++...|+|+|+++..+. .-+.++...|.++ +-.. . | +|..++..++
T Consensus 626 ~~e~l~~~I~~~~~~t~~~~~~gvN~~~~~~~~~~~~~~~~~~~~~~gv~i~~v~~~------a---g--~p~~~~~~~~ 694 (2051)
T 2uv8_G 626 SAAGMTAAIDSVVSQIEKGSTFGINLIYVNPFMLQWGIPLIKELRSKGYPIQFLTIG------A---G--VPSLEVASEY 694 (2051)
T ss_dssp SHHHHHHHHHHHHHHSCTTCCEEEEEETTCTTHHHHHHHHHHHHHHTTCSEEEEEEE------S---S--CCCHHHHHHH
T ss_pred CHHHHHHHHHHHHHhcCCCCceEEEEeecChhhhhhhHHHHHHHHHcCCCcceEEec------C---C--CCchhhHHHH
Confidence 34568889999999875325999998764321 2234444555554 2211 0 1 2333445567
Q ss_pred HHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccE---EEecCCCCCCCCC--------HHHHHHHHhcCC
Q psy9039 146 RKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDG---LIITGNATGDPAD--------VSQLMSVKNAVD 214 (251)
Q Consensus 146 r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~---v~VTG~~~g~~~~--------~~~l~~vr~~~~ 214 (251)
-+++|. +++. .+ + +.....+.+..+...|+|+ +.++|.+.|+... +.++.++++.++
T Consensus 695 i~~lG~---~vi~---~~---~---~~~~a~~~~~~~~~~g~d~~ii~~~~G~eaGGH~g~~d~~~~~l~l~~~v~~~~~ 762 (2051)
T 2uv8_G 695 IETLGL---KYLG---LK---P---GSIDAISQVINIAKAHPNFPIALQWTGGRGGGHHSFEDAHTPMLQMYSKIRRHPN 762 (2051)
T ss_dssp HHHSCC---SCEE---EC---C---CSHHHHHHHHHHHHHSTTSCEEEEECCSSCSEECCSCCSSHHHHHHHHHHTTCTT
T ss_pred HHHcCC---EEEE---ec---C---chHHHHHHHHHHHHhCCCceeEEEEEccCcCCCCCcccccccHHHHHHHHHhcCC
Confidence 777754 4431 11 1 1222333344445569999 4788987775321 245789999999
Q ss_pred CCEEEecCC-ChHhHHHhh-----------c--CCEEEEeceEee
Q psy9039 215 LPILIGSGV-TSDNVEHYM-----------T--ADALIIGSHFKQ 245 (251)
Q Consensus 215 ~PV~vG~GI-~~~~v~~~~-----------~--ADGvIVGS~~~~ 245 (251)
+||++|||| +.+.+..++ . ||||.+||+|+-
T Consensus 763 ipviaaGGi~dg~~~~aaL~g~w~~~~g~~~lgadGv~~GTrf~~ 807 (2051)
T 2uv8_G 763 IMLIFGSGFGSADDTYPYLTGEWSTKFDYPPMPFDGFLFGSRVMI 807 (2051)
T ss_dssp BCCEEESSCCSHHHHTHHHHTCGGGTTTCCCCCCSCEECSGGGTT
T ss_pred ceEEEeCCCCCHHHHHHHHccccccccCccCCCCceeeechHHHh
Confidence 999999999 899988887 5 999999999964
No 60
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=98.62 E-value=5.4e-08 Score=84.98 Aligned_cols=169 Identities=18% Similarity=0.203 Sum_probs=107.1
Q ss_pred CCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeCChHHHHHHHHHcCccceecc
Q psy9039 43 PPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQILSGCNKAALATAQAAGLDFIRAE 122 (251)
Q Consensus 43 ~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~~~~~~ia~a~g~~Fir~~ 122 (251)
+.+.++|+ |.+.+==+ |-.|...+.-||. +++++|+.+++ .|+-+-+..+++......+...|++++-..
T Consensus 47 ~~l~~~G~-d~lHvDVm-Dg~FVpnit~G~~-------~v~~lr~~~p~-~~ldvHLmv~~p~~~i~~~~~aGAd~itvH 116 (246)
T 3inp_A 47 KAVLAAGA-DNIHFDVM-DNHYVPNLTFGPM-------VLKALRDYGIT-AGMDVHLMVKPVDALIESFAKAGATSIVFH 116 (246)
T ss_dssp HHHHHTTC-CCEEEEEE-BSSSSSCBCCCHH-------HHHHHHHHTCC-SCEEEEEECSSCHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHcCC-CEEEEEec-CCCcCcchhcCHH-------HHHHHHHhCCC-CeEEEEEeeCCHHHHHHHHHHcCCCEEEEc
Confidence 55677899 98865322 3457666667764 45667777733 699998888876555666667888888864
Q ss_pred cccccccCCCceeecCcchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCCCCC---
Q psy9039 123 SFVFGHMADEGLMNAQAGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNATGD--- 199 (251)
Q Consensus 123 ~~~~~~~~~~Gli~~da~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~g~--- 199 (251)
... . ....+.++..++.|. .+-+ .+++. |+.++++.+. ..+|.+.+-....|.
T Consensus 117 ~Ea----~------~~~~~~i~~ir~~G~-k~Gv--alnp~------Tp~e~l~~~l-----~~vD~VlvMsV~PGfgGQ 172 (246)
T 3inp_A 117 PEA----S------EHIDRSLQLIKSFGI-QAGL--ALNPA------TGIDCLKYVE-----SNIDRVLIMSVNPGFGGQ 172 (246)
T ss_dssp GGG----C------SCHHHHHHHHHTTTS-EEEE--EECTT------CCSGGGTTTG-----GGCSEEEEECSCTTC--C
T ss_pred ccc----c------hhHHHHHHHHHHcCC-eEEE--EecCC------CCHHHHHHHH-----hcCCEEEEeeecCCCCCc
Confidence 211 1 134455666666665 2222 12222 3333333221 257877653322221
Q ss_pred ---CCCHHHHHHHHhcC-----CCCEEEecCCChHhHHHhhc--CCEEEEeceEee
Q psy9039 200 ---PADVSQLMSVKNAV-----DLPILIGSGVTSDNVEHYMT--ADALIIGSHFKQ 245 (251)
Q Consensus 200 ---~~~~~~l~~vr~~~-----~~PV~vG~GI~~~~v~~~~~--ADGvIVGS~~~~ 245 (251)
+..+++++++|+.. ++|+.+.|||+++|+.++.+ ||.+++||++.+
T Consensus 173 ~fi~~~l~KI~~lr~~~~~~~~~~~I~VDGGI~~~ti~~~~~aGAD~~V~GSaIf~ 228 (246)
T 3inp_A 173 KFIPAMLDKAKEISKWISSTDRDILLEIDGGVNPYNIAEIAVCGVNAFVAGSAIFN 228 (246)
T ss_dssp CCCTTHHHHHHHHHHHHHHHTSCCEEEEESSCCTTTHHHHHTTTCCEEEESHHHHT
T ss_pred ccchHHHHHHHHHHHHHHhcCCCeeEEEECCcCHHHHHHHHHcCCCEEEEehHHhC
Confidence 23357888888653 58999999999999999996 999999999764
No 61
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=98.60 E-value=4.8e-08 Score=83.05 Aligned_cols=155 Identities=16% Similarity=0.127 Sum_probs=90.4
Q ss_pred CCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeCChHHHHHHHHHcCccceecc
Q psy9039 43 PPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQILSGCNKAALATAQAAGLDFIRAE 122 (251)
Q Consensus 43 ~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~~~~~~ia~a~g~~Fir~~ 122 (251)
..+.++|+ |.+.+ +.+. .. ......+++++++... +++ .++.|+. ..++...|++.+...
T Consensus 36 ~~~~~~G~-~~v~l----r~~~-----~~---~~~~~~~~~~l~~~~~---~~~-~l~v~~~---~~~a~~~gad~v~l~ 95 (221)
T 1yad_A 36 IITIQNEV-DFIHI----RERS-----KS---AADILKLLDLIFEGGI---DKR-KLVMNGR---VDIALFSTIHRVQLP 95 (221)
T ss_dssp HHHHGGGC-SEEEE----CCTT-----SC---HHHHHHHHHHHHHTTC---CGG-GEEEESC---HHHHHTTTCCEEEEC
T ss_pred HHHHHCCC-CEEEE----ccCC-----CC---HHHHHHHHHHHHHhcC---cCC-eEEEeCh---HHHHHHcCCCEEEeC
Confidence 34567899 98864 3221 11 2234566777776532 333 4445552 466677777877642
Q ss_pred cccccccCCCceeecCcchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecC-----CCC
Q psy9039 123 SFVFGHMADEGLMNAQAGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITG-----NAT 197 (251)
Q Consensus 123 ~~~~~~~~~~Gli~~da~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG-----~~~ 197 (251)
. +.......++..+ +..+.. +.+ +.++ ++.+...++|++++.. ...
T Consensus 96 ~--------------~~~~~~~~~~~~~--~~~ig~------sv~------t~~~-~~~a~~~gaD~i~~~~~f~~~~~~ 146 (221)
T 1yad_A 96 S--------------GSFSPKQIRARFP--HLHIGR------SVH------SLEE-AVQAEKEDADYVLFGHVFETDCKK 146 (221)
T ss_dssp T--------------TSCCHHHHHHHCT--TCEEEE------EEC------SHHH-HHHHHHTTCSEEEEECCC------
T ss_pred C--------------CccCHHHHHHHCC--CCEEEE------EcC------CHHH-HHHHHhCCCCEEEECCccccCCCC
Confidence 1 0011222233322 222211 111 2233 4555557899998732 222
Q ss_pred CCC-CCHHHHHHHHhcCCCCEEEecCCChHhHHHhhc--CCEEEEeceEeec
Q psy9039 198 GDP-ADVSQLMSVKNAVDLPILIGSGVTSDNVEHYMT--ADALIIGSHFKQG 246 (251)
Q Consensus 198 g~~-~~~~~l~~vr~~~~~PV~vG~GI~~~~v~~~~~--ADGvIVGS~~~~~ 246 (251)
|.. ..++.++++++..++||++.||||++|+.+++. |||+.|||+|...
T Consensus 147 g~~~~~~~~l~~~~~~~~~pvia~GGI~~~nv~~~~~~Ga~gv~vgs~i~~~ 198 (221)
T 1yad_A 147 GLEGRGVSLLSDIKQRISIPVIAIGGMTPDRLRDVKQAGADGIAVMSGIFSS 198 (221)
T ss_dssp ----CHHHHHHHHHHHCCSCEEEESSCCGGGHHHHHHTTCSEEEESHHHHTS
T ss_pred CCCCCCHHHHHHHHHhCCCCEEEECCCCHHHHHHHHHcCCCEEEEhHHhhCC
Confidence 212 246788888887899999999999999999996 9999999998753
No 62
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=98.60 E-value=3e-08 Score=85.81 Aligned_cols=169 Identities=18% Similarity=0.212 Sum_probs=107.1
Q ss_pred CCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeCChHHHHHHHHHcCccceecc
Q psy9039 43 PPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQILSGCNKAALATAQAAGLDFIRAE 122 (251)
Q Consensus 43 ~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~~~~~~ia~a~g~~Fir~~ 122 (251)
+.+ ++|+ |.+.+-=+ |-.|...+.-||. +++++|+.++ .|+-+-++.+++..-...+...|++++-..
T Consensus 20 ~~~-~~ga-d~lHvDvm-DG~fvpn~t~G~~-------~v~~lr~~~~--~~~dvhLmv~dp~~~i~~~~~aGAd~itvh 87 (231)
T 3ctl_A 20 EFI-DSHA-DYFHIDIM-DGHFVPNLTLSPF-------FVSQVKKLAT--KPLDCHLMVTRPQDYIAQLARAGADFITLH 87 (231)
T ss_dssp HHH-HTTC-SCEEEEEE-CSSSSSCCCBCHH-------HHHHHHTTCC--SCEEEEEESSCGGGTHHHHHHHTCSEEEEC
T ss_pred HHH-HcCC-CEEEEEEE-eCccCccchhcHH-------HHHHHHhccC--CcEEEEEEecCHHHHHHHHHHcCCCEEEEC
Confidence 556 7888 88765433 4456555556764 5677787776 688888888875444566667888888754
Q ss_pred cccccccCCCceeecCcchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCCCC----
Q psy9039 123 SFVFGHMADEGLMNAQAGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNATG---- 198 (251)
Q Consensus 123 ~~~~~~~~~~Gli~~da~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~g---- 198 (251)
... +.+...+..+..++.|. .+-+ .+++. |+.++++.+. .++|.+.+-....|
T Consensus 88 ~Ea---------~~~~~~~~i~~i~~~G~-k~gv--~lnp~------tp~~~~~~~l-----~~~D~VlvmsV~pGfggQ 144 (231)
T 3ctl_A 88 PET---------INGQAFRLIDEIRRHDM-KVGL--ILNPE------TPVEAMKYYI-----HKADKITVMTVDPGFAGQ 144 (231)
T ss_dssp GGG---------CTTTHHHHHHHHHHTTC-EEEE--EECTT------CCGGGGTTTG-----GGCSEEEEESSCTTCSSC
T ss_pred ccc---------CCccHHHHHHHHHHcCC-eEEE--EEECC------CcHHHHHHHH-----hcCCEEEEeeeccCcCCc
Confidence 211 01134456667777765 2222 12222 2323332221 36888765333222
Q ss_pred --CCCCHHHHHHHHhcC-----CCCEEEecCCChHhHHHhhc--CCEEEEe-ceEeec
Q psy9039 199 --DPADVSQLMSVKNAV-----DLPILIGSGVTSDNVEHYMT--ADALIIG-SHFKQG 246 (251)
Q Consensus 199 --~~~~~~~l~~vr~~~-----~~PV~vG~GI~~~~v~~~~~--ADGvIVG-S~~~~~ 246 (251)
.+..+++++++|+.. ++||.+.|||+++|+.++.+ ||++|+| |++.+.
T Consensus 145 ~f~~~~l~kI~~lr~~~~~~~~~~~I~VdGGI~~~~~~~~~~aGAd~~V~G~saif~~ 202 (231)
T 3ctl_A 145 PFIPEMLDKLAELKAWREREGLEYEIEVDGSCNQATYEKLMAAGADVFIVGTSGLFNH 202 (231)
T ss_dssp CCCTTHHHHHHHHHHHHHHHTCCCEEEEESCCSTTTHHHHHHHTCCEEEECTTTTGGG
T ss_pred cccHHHHHHHHHHHHHHhccCCCceEEEECCcCHHHHHHHHHcCCCEEEEccHHHhCC
Confidence 122357788888765 68999999999999999986 9999999 998753
No 63
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=98.58 E-value=8.2e-08 Score=84.08 Aligned_cols=165 Identities=15% Similarity=0.078 Sum_probs=109.0
Q ss_pred CCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeCChHHHHHHHHHcCccceecc
Q psy9039 43 PPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQILSGCNKAALATAQAAGLDFIRAE 122 (251)
Q Consensus 43 ~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~~~~~~ia~a~g~~Fir~~ 122 (251)
+.++++|+ ++|-+-..- .|... ...-++++|+.++ +|+-.--|..+ .++...|.+.|++.+...
T Consensus 72 ~~~~~~GA-~~isvlt~~--~~f~G----------~~~~l~~i~~~v~--lPvl~kdfI~d-~~qi~~a~~~GAD~VlL~ 135 (254)
T 1vc4_A 72 LAYARGGA-RAVSVLTEP--HRFGG----------SLLDLKRVREAVD--LPLLRKDFVVD-PFMLEEARAFGASAALLI 135 (254)
T ss_dssp HHHHHTTC-SEEEEECCC--SSSCC----------CHHHHHHHHHHCC--SCEEEESCCCS-HHHHHHHHHTTCSEEEEE
T ss_pred HHHHHcCC-CEEEEecch--hhhcc----------CHHHHHHHHHhcC--CCEEECCcCCC-HHHHHHHHHcCCCEEEEC
Confidence 66889999 999874332 22221 2235677888888 89887777766 567777888999988863
Q ss_pred cccccccCCCceeecCcchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCCC-CCCC
Q psy9039 123 SFVFGHMADEGLMNAQAGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNAT-GDPA 201 (251)
Q Consensus 123 ~~~~~~~~~~Gli~~da~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~-g~~~ 201 (251)
.. - +.....++..+.+.+|.+ +.+ + ++ +.++ ++.+...++|.++++.... ....
T Consensus 136 ~~--------~-l~~~l~~l~~~a~~lGl~-~lv--e------v~------~~~E-~~~a~~~gad~IGvn~~~l~~~~~ 190 (254)
T 1vc4_A 136 VA--------L-LGELTGAYLEEARRLGLE-ALV--E------VH------TERE-LEIALEAGAEVLGINNRDLATLHI 190 (254)
T ss_dssp HH--------H-HGGGHHHHHHHHHHHTCE-EEE--E------EC------SHHH-HHHHHHHTCSEEEEESBCTTTCCB
T ss_pred cc--------c-hHHHHHHHHHHHHHCCCe-EEE--E------EC------CHHH-HHHHHHcCCCEEEEccccCcCCCC
Confidence 11 0 112455566666677752 211 0 11 1223 3445456789998866422 2344
Q ss_pred CHHHHHHHHhcC-----CCCEEEecCC-ChHhHHHhhc-CCEEEEeceEeecCe
Q psy9039 202 DVSQLMSVKNAV-----DLPILIGSGV-TSDNVEHYMT-ADALIIGSHFKQGGR 248 (251)
Q Consensus 202 ~~~~l~~vr~~~-----~~PV~vG~GI-~~~~v~~~~~-ADGvIVGS~~~~~g~ 248 (251)
+++.+.++++.. ++|++..||| |++++.++.. +||++|||+|.+..+
T Consensus 191 dl~~~~~L~~~i~~~~~~~~vIAegGI~s~~dv~~l~~Ga~gvlVGsAl~~~~d 244 (254)
T 1vc4_A 191 NLETAPRLGRLARKRGFGGVLVAESGYSRKEELKALEGLFDAVLIGTSLMRAPD 244 (254)
T ss_dssp CTTHHHHHHHHHHHTTCCSEEEEESCCCSHHHHHTTTTTCSEEEECHHHHTSSC
T ss_pred CHHHHHHHHHhCccccCCCeEEEEcCCCCHHHHHHHHcCCCEEEEeHHHcCCCC
Confidence 555556665554 7899999999 5999999998 999999999988654
No 64
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=98.55 E-value=6.5e-08 Score=93.49 Aligned_cols=192 Identities=19% Similarity=0.196 Sum_probs=119.2
Q ss_pred CCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeCCh----------HHHHHHHH
Q psy9039 43 PPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQILSGCN----------KAALATAQ 112 (251)
Q Consensus 43 ~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~----------~~~~~ia~ 112 (251)
+.+.+.|+ |.|.+-|..+. . .+|.....+.++++++++.++ +|+-+..=..+. .+......
T Consensus 287 ~~~~~~Ga-~~l~~~dl~~~--~----~~~~~~~~~~~~i~~i~~~~~--ipi~vgGGIr~~~d~~~~~~~~~~~a~~~l 357 (555)
T 1jvn_A 287 QKYYQQGA-DEVTFLNITSF--R----DCPLKDTPMLEVLKQAAKTVF--VPLTVGGGIKDIVDVDGTKIPALEVASLYF 357 (555)
T ss_dssp HHHHHTTC-SEEEEEEEC---------CCCGGGCHHHHHHHHHTTTCC--SCEEEESSCSCEECTTCCEECHHHHHHHHH
T ss_pred HHHHHcCC-CEEEEEeCCcc--c----cccCCCchHHHHHHHHHhhCC--CcEEEeCccccchhcccccchHHHHHHHHH
Confidence 56778899 99999887753 1 223233336677888888777 787766543331 12233344
Q ss_pred HcCccceecccccccc-----cCCCceeecCcchhHHHHHhcCCCcchhhhhhHhh------------------------
Q psy9039 113 AAGLDFIRAESFVFGH-----MADEGLMNAQAGPLLRYRKQIGADNVLVFTDIKKK------------------------ 163 (251)
Q Consensus 113 a~g~~Fir~~~~~~~~-----~~~~Gli~~da~e~~~~r~~l~~~~i~i~a~v~~k------------------------ 163 (251)
..|++-+-++..+-.. ....|.. +...+.+..+++|...+-+-.|+...
T Consensus 358 ~aGad~V~igt~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~g~~~ivv~iD~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 435 (555)
T 1jvn_A 358 RSGADKVSIGTDAVYAAEKYYELGNRGD--GTSPIETISKAYGAQAVVISVDPKRVYVNSQADTKNKVFETEYPGPNGEK 435 (555)
T ss_dssp HHTCSEEEECHHHHHHHHHHHHTTSCCC--SCSHHHHHHHHHCGGGEEEEECEEEEEESSGGGCSSCCEECSSCCTTCCC
T ss_pred HcCCCEEEECCHHhhCchhhcccccccc--CHHHHHHHHHHhCCCcEEEEEEccccccccccccccccccccccCCCCCc
Confidence 5677877765322110 0122222 33455567777764333222233210
Q ss_pred --------ccCCCCCCcccHHHHHHHhhhccccEEEecCCCC-CC--CCCHHHHHHHHhcCCCCEEEecCC-ChHhHHHh
Q psy9039 164 --------HSSHAITADVDITETAKAASFFLSDGLIITGNAT-GD--PADVSQLMSVKNAVDLPILIGSGV-TSDNVEHY 231 (251)
Q Consensus 164 --------~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~-g~--~~~~~~l~~vr~~~~~PV~vG~GI-~~~~v~~~ 231 (251)
+|.. ..++.+..+.++.++..|+|.+++|+... |. ..++++++++++.+++||++.||| +++++.++
T Consensus 436 ~~~~~v~~~Gw~-~~~~~~~~e~a~~~~~~Ga~~il~t~~~~dG~~~G~d~~li~~l~~~~~iPVIasGGi~s~~d~~~~ 514 (555)
T 1jvn_A 436 YCWYQCTIKGGR-ESRDLGVWELTRACEALGAGEILLNCIDKDGSNSGYDLELIEHVKDAVKIPVIASSGAGVPEHFEEA 514 (555)
T ss_dssp EEEEEEEETTTT-EEEEEEHHHHHHHHHHTTCCEEEECCGGGTTTCSCCCHHHHHHHHHHCSSCEEECSCCCSHHHHHHH
T ss_pred ceeEEEEEecCc-cCCCCCHHHHHHHHHHcCCCEEEEeCCCCCCCCCCCCHHHHHHHHHhCCccEEEECCCCCHHHHHHH
Confidence 0000 00123456778888878999999998533 22 247899999999999999999999 79999998
Q ss_pred hc---CCEEEEeceEeec
Q psy9039 232 MT---ADALIIGSHFKQG 246 (251)
Q Consensus 232 ~~---ADGvIVGS~~~~~ 246 (251)
++ |||+++||+|..+
T Consensus 515 ~~~~G~~gvivg~a~~~~ 532 (555)
T 1jvn_A 515 FLKTRADACLGAGMFHRG 532 (555)
T ss_dssp HHHSCCSEEEESHHHHTT
T ss_pred HHhcCChHHHHHHHHHcC
Confidence 73 9999999998543
No 65
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=98.55 E-value=1.5e-07 Score=82.37 Aligned_cols=116 Identities=16% Similarity=0.241 Sum_probs=85.3
Q ss_pred cCccceecccccccccCCCceeecCcchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEec
Q psy9039 114 AGLDFIRAESFVFGHMADEGLMNAQAGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIIT 193 (251)
Q Consensus 114 ~g~~Fir~~~~~~~~~~~~Gli~~da~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VT 193 (251)
.+.+|++.. -.+++-...||..+.++..+++-.++++++ |.++++ ...++..+..|++++..-
T Consensus 101 ~~~~~iKlE-----v~~d~~~llpD~~~tv~aa~~L~~~Gf~Vl---------py~~dd---~~~akrl~~~G~~aVmPl 163 (265)
T 1wv2_A 101 DGHNLVKLE-----VLADQKTLFPNVVETLKAAEQLVKDGFDVM---------VYTSDD---PIIARQLAEIGCIAVMPL 163 (265)
T ss_dssp TSCCEEEEC-----CBSCTTTCCBCHHHHHHHHHHHHTTTCEEE---------EEECSC---HHHHHHHHHSCCSEEEEC
T ss_pred CCCCeEEEE-----eecCccccCcCHHHHHHHHHHHHHCCCEEE---------EEeCCC---HHHHHHHHHhCCCEEEeC
Confidence 345788864 244566778898899988888855556654 221222 334556566799999885
Q ss_pred CCC--CCCC-CCHHHHHHHHhcCCCCEEEecCC-ChHhHHHhhc--CCEEEEeceEeec
Q psy9039 194 GNA--TGDP-ADVSQLMSVKNAVDLPILIGSGV-TSDNVEHYMT--ADALIIGSHFKQG 246 (251)
Q Consensus 194 G~~--~g~~-~~~~~l~~vr~~~~~PV~vG~GI-~~~~v~~~~~--ADGvIVGS~~~~~ 246 (251)
|.- +|.. .+.++|+++++..++||++++|| ||++++++++ ||||.|||+|.+.
T Consensus 164 g~pIGsG~Gi~~~~lI~~I~e~~~vPVI~eGGI~TPsDAa~AmeLGAdgVlVgSAI~~a 222 (265)
T 1wv2_A 164 AGLIGSGLGICNPYNLRIILEEAKVPVLVDAGVGTASDAAIAMELGCEAVLMNTAIAHA 222 (265)
T ss_dssp SSSTTCCCCCSCHHHHHHHHHHCSSCBEEESCCCSHHHHHHHHHHTCSEEEESHHHHTS
T ss_pred CccCCCCCCcCCHHHHHHHHhcCCCCEEEeCCCCCHHHHHHHHHcCCCEEEEChHHhCC
Confidence 642 2322 36889999999889999999999 7999999997 9999999998653
No 66
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.48 E-value=2.9e-07 Score=77.92 Aligned_cols=66 Identities=12% Similarity=0.164 Sum_probs=50.4
Q ss_pred HHHhhhccccEEEe-----cCCCCCC--CCCHHHHHHHHhc--CCCCEEEecCCChHhHHHhhc--CCEEEEeceEee
Q psy9039 179 AKAASFFLSDGLII-----TGNATGD--PADVSQLMSVKNA--VDLPILIGSGVTSDNVEHYMT--ADALIIGSHFKQ 245 (251)
Q Consensus 179 a~~a~~~~~D~v~V-----TG~~~g~--~~~~~~l~~vr~~--~~~PV~vG~GI~~~~v~~~~~--ADGvIVGS~~~~ 245 (251)
+..|. .|+|++.+ |+++.+. ...++.++++++. .++||++-|||+++|+.++++ |+|+.|||+|..
T Consensus 101 ~~~A~-~GaDyv~~g~vf~t~sk~~~~~~~g~~~l~~~~~~~~~~iPviaiGGI~~~nv~~~~~~Ga~gVav~s~i~~ 177 (210)
T 3ceu_A 101 VKNRK-HFYDYVFMSPIYDSISKVNYYSTYTAEELREAQKAKIIDSKVMALGGINEDNLLEIKDFGFGGAVVLGDLWN 177 (210)
T ss_dssp HHTTG-GGSSEEEECCCC---------CCCCHHHHHHHHHTTCSSTTEEEESSCCTTTHHHHHHTTCSEEEESHHHHT
T ss_pred HHHHh-hCCCEEEECCcCCCCCCCCCCCCCCHHHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHhCCCEEEEhHHhHc
Confidence 56666 89999985 4444442 2357888988887 689999999999999999996 999999999865
No 67
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=98.47 E-value=5.5e-07 Score=82.82 Aligned_cols=143 Identities=15% Similarity=0.223 Sum_probs=86.7
Q ss_pred HHHHHHHHHHhCCCCccEEEEEeeCC-hHHHHHHHHHcCccceecccccccccCCCceeecCcch-hHHHHHhcCCCcch
Q psy9039 78 MTRLCAEIRKVLPPSVPVGVQILSGC-NKAALATAQAAGLDFIRAESFVFGHMADEGLMNAQAGP-LLRYRKQIGADNVL 155 (251)
Q Consensus 78 ~~~~i~~vr~~~~~~~P~Gvn~~~N~-~~~~~~ia~a~g~~Fir~~~~~~~~~~~~Gli~~da~e-~~~~r~~l~~~~i~ 155 (251)
....++++|+..+ .++++++..++ .......+...|++++..+...+ .. ....+ +.+.++.++ ++.
T Consensus 84 ~~~~i~~vk~~~~--l~vga~vg~~~~~~~~~~~lieaGvd~I~idta~G----~~----~~~~~~I~~ik~~~p--~v~ 151 (366)
T 4fo4_A 84 QAAQVHQVKISGG--LRVGAAVGAAPGNEERVKALVEAGVDVLLIDSSHG----HS----EGVLQRIRETRAAYP--HLE 151 (366)
T ss_dssp HHHHHHHHHTTTS--CCCEEECCSCTTCHHHHHHHHHTTCSEEEEECSCT----TS----HHHHHHHHHHHHHCT--TCE
T ss_pred HHHHHHHHHhcCc--eeEEEEeccChhHHHHHHHHHhCCCCEEEEeCCCC----CC----HHHHHHHHHHHHhcC--CCc
Confidence 3456677776544 57777765553 14556667778888877532111 00 01111 223444442 344
Q ss_pred hhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCCCCC-----------CCCHHHHHHHHh---cCCCCEEEec
Q psy9039 156 VFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNATGD-----------PADVSQLMSVKN---AVDLPILIGS 221 (251)
Q Consensus 156 i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~g~-----------~~~~~~l~~vr~---~~~~PV~vG~ 221 (251)
++. .+....+.++.+...|+|++.+ |...|. .+..+.+.++++ ..++||++.|
T Consensus 152 Vi~------------G~v~t~e~A~~a~~aGAD~I~v-G~gpGs~~~tr~~~g~g~p~~~~l~~v~~~~~~~~iPVIA~G 218 (366)
T 4fo4_A 152 IIG------------GNVATAEGARALIEAGVSAVKV-GIGPGSICTTRIVTGVGVPQITAIADAAGVANEYGIPVIADG 218 (366)
T ss_dssp EEE------------EEECSHHHHHHHHHHTCSEEEE-CSSCSTTBCHHHHHCCCCCHHHHHHHHHHHHGGGTCCEEEES
T ss_pred eEe------------eeeCCHHHHHHHHHcCCCEEEE-ecCCCCCCCcccccCcccchHHHHHHHHHHHhhcCCeEEEeC
Confidence 432 1112244566666679999999 322221 233455666654 4689999999
Q ss_pred CC-ChHhHHHhhc--CCEEEEeceEee
Q psy9039 222 GV-TSDNVEHYMT--ADALIIGSHFKQ 245 (251)
Q Consensus 222 GI-~~~~v~~~~~--ADGvIVGS~~~~ 245 (251)
|| +++++.+++. ||+|.+||+|..
T Consensus 219 GI~~~~di~kala~GAd~V~vGs~f~~ 245 (366)
T 4fo4_A 219 GIRFSGDISKAIAAGASCVMVGSMFAG 245 (366)
T ss_dssp CCCSHHHHHHHHHTTCSEEEESTTTTT
T ss_pred CCCCHHHHHHHHHcCCCEEEEChHhhc
Confidence 99 7999999886 999999999864
No 68
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=98.43 E-value=6.3e-07 Score=79.98 Aligned_cols=72 Identities=13% Similarity=0.160 Sum_probs=56.1
Q ss_pred cHHHHHHHhhhccccEEEecCCC---------CC--------------CCC----CHHHHHHHHhcC--CCCEEEecCC-
Q psy9039 174 DITETAKAASFFLSDGLIITGNA---------TG--------------DPA----DVSQLMSVKNAV--DLPILIGSGV- 223 (251)
Q Consensus 174 ~i~~~a~~a~~~~~D~v~VTG~~---------~g--------------~~~----~~~~l~~vr~~~--~~PV~vG~GI- 223 (251)
.+.++++.++..|+|++.+++.- +. ... .++.++++++.+ ++||+..|||
T Consensus 173 ~~~~~a~~~~~~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~~~~i~~v~~~~~~~ipvi~~GGI~ 252 (311)
T 1jub_A 173 HFDIMAEILNQFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALANVRAFYTRLKPEIQIIGTGGIE 252 (311)
T ss_dssp HHHHHHHHHTTSCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHHHHHHHHHHTTSCTTSEEEEESSCC
T ss_pred HHHHHHHHHHHcCCcEEEecCCCCcCceeccCCCCcccccCCCCCccccccccHHHHHHHHHHHHhcCCCCCEEEECCCC
Confidence 34555666666899999998752 00 011 246788999998 8999999999
Q ss_pred ChHhHHHhhc--CCEEEEeceEee
Q psy9039 224 TSDNVEHYMT--ADALIIGSHFKQ 245 (251)
Q Consensus 224 ~~~~v~~~~~--ADGvIVGS~~~~ 245 (251)
|++++.+++. ||+|.+||+|..
T Consensus 253 ~~~da~~~l~~GAd~V~vg~~~l~ 276 (311)
T 1jub_A 253 TGQDAFEHLLCGATMLQIGTALHK 276 (311)
T ss_dssp SHHHHHHHHHHTCSEEEECHHHHH
T ss_pred CHHHHHHHHHcCCCEEEEchHHHh
Confidence 7999999885 999999999985
No 69
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=98.42 E-value=1.3e-06 Score=79.40 Aligned_cols=155 Identities=16% Similarity=0.175 Sum_probs=101.1
Q ss_pred hHHHHHHHHHhhCCCCcCCCCccEEEEeecCC-------CCccccCCC---ch-H-HHHHHHHHHHHHHHhCCCCccEEE
Q psy9039 30 NMTRLCAEIRKVLPPSVPVGVQHGVIVENMHD-------VPYVLEAES---GP-E-ITANMTRLCAEIRKVLPPSVPVGV 97 (251)
Q Consensus 30 ~~~~i~~~a~~~a~~l~~~Gv~D~i~ieN~~~-------~Pf~~p~~~---gp-~-i~aa~~~~i~~vr~~~~~~~P~Gv 97 (251)
.++.+++.-.+.|+.+.++|+ |+|+|-=-.| -|.+..-.| |. + ...-..++++++|+.++ .|+++
T Consensus 138 eI~~ii~~f~~aA~~a~~aGf-DgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr~~v~--~pv~v 214 (340)
T 3gr7_A 138 DIEETVQAFQNGARRAKEAGF-DVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREVWD--GPLFV 214 (340)
T ss_dssp HHHHHHHHHHHHHHHHHHHTC-SEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCC--SCEEE
T ss_pred HHHHHHHHHHHHHHHHHHcCC-CEEEEccccchHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHHHhcC--CceEE
Confidence 467777777788888889999 9999831111 366543223 22 1 12234568899999886 68888
Q ss_pred EEeeCChHHHHHHHHHcCccceecccccccccCCCceeecCcchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHH
Q psy9039 98 QILSGCNKAALATAQAAGLDFIRAESFVFGHMADEGLMNAQAGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITE 177 (251)
Q Consensus 98 n~~~N~~~~~~~ia~a~g~~Fir~~~~~~~~~~~~Gli~~da~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~ 177 (251)
=+-.+ +|.. .|. +.....+
T Consensus 215 Rls~~--------------~~~~-----------~g~------------------------------------~~~~~~~ 233 (340)
T 3gr7_A 215 RISAS--------------DYHP-----------DGL------------------------------------TAKDYVP 233 (340)
T ss_dssp EEESC--------------CCST-----------TSC------------------------------------CGGGHHH
T ss_pred Eeccc--------------cccC-----------CCC------------------------------------CHHHHHH
Confidence 65322 2311 010 0012234
Q ss_pred HHHHhhhccccEEEecCCCC-------CCCCCHHHHHHHHhcCCCCEEEecCC-ChHhHHHhhc---CCEEEEeceEeec
Q psy9039 178 TAKAASFFLSDGLIITGNAT-------GDPADVSQLMSVKNAVDLPILIGSGV-TSDNVEHYMT---ADALIIGSHFKQG 246 (251)
Q Consensus 178 ~a~~a~~~~~D~v~VTG~~~-------g~~~~~~~l~~vr~~~~~PV~vG~GI-~~~~v~~~~~---ADGvIVGS~~~~~ 246 (251)
+++..+..|+|++-++.... +.....+.++++|+.+++||+++||| +++++.+++. ||+|.+|+.|+.|
T Consensus 234 la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ik~~~~iPVi~~GgI~s~e~a~~~L~~G~aD~V~iGR~~lan 313 (340)
T 3gr7_A 234 YAKRMKEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELIRREADIPTGAVGLITSGWQAEEILQNGRADLVFLGRELLRN 313 (340)
T ss_dssp HHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHTTCCEEEESSCCCHHHHHHHHHTTSCSEEEECHHHHHC
T ss_pred HHHHHHHcCCCEEEEecCCccCCCCCCCccccHHHHHHHHHHcCCcEEeeCCCCCHHHHHHHHHCCCeeEEEecHHHHhC
Confidence 44554556888888763221 11124678889999999999999999 6999999884 9999999999876
Q ss_pred Ce
Q psy9039 247 GR 248 (251)
Q Consensus 247 g~ 248 (251)
-.
T Consensus 314 Pd 315 (340)
T 3gr7_A 314 PY 315 (340)
T ss_dssp TT
T ss_pred ch
Confidence 43
No 70
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=98.38 E-value=2.6e-07 Score=80.16 Aligned_cols=184 Identities=10% Similarity=0.013 Sum_probs=106.6
Q ss_pred cccccccCCCCCCCcchHHHHHHHHHhhCCCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCc
Q psy9039 14 DVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSV 93 (251)
Q Consensus 14 ~~p~~~~~pG~P~~~~~~~~i~~~a~~~a~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~ 93 (251)
..|++.+ .|+. .-.+++ +.+.++|+ |.+.+-=+ |-.|.....-|| .+++++|+.++ .
T Consensus 16 i~psila--~D~~--~l~~~i--------~~~~~~ga-d~lhvDvm-DG~fvpn~t~G~-------~~v~~lr~~~~--~ 72 (237)
T 3cu2_A 16 LSVGILS--ANWL--QLNEEV--------TTLLENQI-NVLHFDIA-DGQFSSLFTVGA-------IGIKYFPTHCF--K 72 (237)
T ss_dssp EEEEGGG--SCGG--GHHHHH--------HHHHHTTC-CEEEEEEE-BSSSSSCBCBCT-------HHHHTSCTTSE--E
T ss_pred EEEeeee--CCcc--cHHHHH--------HHHHHcCC-CEEEEEEe-cCccccchhhhH-------HHHHHHhhhCC--C
Confidence 5688877 6553 112334 45567899 98765433 334555556676 34566776654 3
Q ss_pred cEEEEEeeCChHHHHHHHHHcCccceecccccccccCCCceeecCcchhHHHHHhc---------CCCcchhhhhhHhhc
Q psy9039 94 PVGVQILSGCNKAALATAQAAGLDFIRAESFVFGHMADEGLMNAQAGPLLRYRKQI---------GADNVLVFTDIKKKH 164 (251)
Q Consensus 94 P~Gvn~~~N~~~~~~~ia~a~g~~Fir~~~~~~~~~~~~Gli~~da~e~~~~r~~l---------~~~~i~i~a~v~~k~ 164 (251)
-+-++.+.+..-...+...|++++-... ++ .....+..+..++. |. ++--.+++.
T Consensus 73 --DvhLMv~~p~~~i~~~~~aGAd~itvH~--ea--------~~~~~~~i~~i~~~~~~~~~~~~g~---~~gv~l~p~- 136 (237)
T 3cu2_A 73 --DVHLMVRNQLEVAKAVVANGANLVTLQL--EQ--------YHDFALTIEWLAKQKTTYANQVYPV---LIGACLCPE- 136 (237)
T ss_dssp --EEEEECSCHHHHHHHHHHTTCSEEEEET--TC--------TTSHHHHHHHHTTCEEEETTEEEEC---EEEEEECTT-
T ss_pred --CeEEEEECHHHHHHHHHHcCCCEEEEec--CC--------cccHHHHHHHHHhcccccccccCCc---eEEEEEeCC-
Confidence 5666656655556777778888855431 10 11223344444443 32 222112211
Q ss_pred cCCCCCCcccHHHHHHHhhhccccEEEecCCCCCCC------CCHHHHHHHHhcC-----CCCEEEecCCChHhHHHhhc
Q psy9039 165 SSHAITADVDITETAKAASFFLSDGLIITGNATGDP------ADVSQLMSVKNAV-----DLPILIGSGVTSDNVEHYMT 233 (251)
Q Consensus 165 ~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~g~~------~~~~~l~~vr~~~-----~~PV~vG~GI~~~~v~~~~~ 233 (251)
|+.+.++.+ ..++|.+.+-+...|.. ..+++++++|+.. ++||.+.|||+++|+.++.+
T Consensus 137 -----Tp~~~l~~~-----l~~~D~vlvMsv~pgfggq~f~~~~l~ki~~lr~~~~~~~~~~~I~vdGGI~~~~~~~~~~ 206 (237)
T 3cu2_A 137 -----TPISELEPY-----LDQIDVIQLLTLDPRNGTKYPSELILDRVIQVEKRLGNRRVEKLINIDGSMTLELAKYFKQ 206 (237)
T ss_dssp -----SCGGGGTTT-----TTTCSEEEEESEETTTTEECCHHHHHHHHHHHHHHHGGGGGGCEEEEESSCCHHHHHHHHH
T ss_pred -----ChHHHHHHH-----hhcCceeeeeeeccCcCCeecChhHHHHHHHHHHHHHhcCCCceEEEECCcCHHHHHHHHH
Confidence 222232221 13688886633333221 1246778888775 58999999999999987763
Q ss_pred ----CCEEEEeceEeec
Q psy9039 234 ----ADALIIGSHFKQG 246 (251)
Q Consensus 234 ----ADGvIVGS~~~~~ 246 (251)
||++++||++.+.
T Consensus 207 ~~aGad~~VvGSaIf~~ 223 (237)
T 3cu2_A 207 GTHQIDWLVSGSALFSG 223 (237)
T ss_dssp SSSCCCCEEECGGGGSS
T ss_pred hCCCCcEEEEeeHHhCC
Confidence 9999999998764
No 71
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=98.37 E-value=3e-06 Score=76.84 Aligned_cols=154 Identities=16% Similarity=0.161 Sum_probs=99.8
Q ss_pred hHHHHHHHHHhhCCCCcCCCCccEEEEeecCC-------CCccccCCC---ch--HHHHHHHHHHHHHHHhCCCCccEEE
Q psy9039 30 NMTRLCAEIRKVLPPSVPVGVQHGVIVENMHD-------VPYVLEAES---GP--EITANMTRLCAEIRKVLPPSVPVGV 97 (251)
Q Consensus 30 ~~~~i~~~a~~~a~~l~~~Gv~D~i~ieN~~~-------~Pf~~p~~~---gp--~i~aa~~~~i~~vr~~~~~~~P~Gv 97 (251)
.++.+++.-.+.|+.+.++|+ |+|+|---.| -|.+....| |. -...-+.++++++|+.++ .|+++
T Consensus 138 eI~~~i~~~~~aA~~a~~aGf-DgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~v~--~pv~v 214 (338)
T 1z41_A 138 KVKETVQEFKQAAARAKEAGF-DVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVWD--GPLFV 214 (338)
T ss_dssp HHHHHHHHHHHHHHHHHHTTC-SEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCC--SCEEE
T ss_pred HHHHHHHHHHHHHHHHHHcCC-CEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHHcC--CcEEE
Confidence 456677777777888889999 9999832222 265432222 22 122334568888998886 68887
Q ss_pred EEeeCChHHHHHHHHHcCccceecccccccccCCCceeecCcchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHH
Q psy9039 98 QILSGCNKAALATAQAAGLDFIRAESFVFGHMADEGLMNAQAGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITE 177 (251)
Q Consensus 98 n~~~N~~~~~~~ia~a~g~~Fir~~~~~~~~~~~~Gli~~da~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~ 177 (251)
=+-.+ +|... | . +.....+
T Consensus 215 ris~~--------------~~~~~-----------g-----------------~-------------------~~~~~~~ 233 (338)
T 1z41_A 215 RVSAS--------------DYTDK-----------G-----------------L-------------------DIADHIG 233 (338)
T ss_dssp EEECC--------------CCSTT-----------S-----------------C-------------------CHHHHHH
T ss_pred EecCc--------------ccCCC-----------C-----------------C-------------------CHHHHHH
Confidence 65332 22110 1 0 0011233
Q ss_pred HHHHhhhccccEEEecCCC---C--CCC--CCHHHHHHHHhcCCCCEEEecCC-ChHhHHHhhc---CCEEEEeceEeec
Q psy9039 178 TAKAASFFLSDGLIITGNA---T--GDP--ADVSQLMSVKNAVDLPILIGSGV-TSDNVEHYMT---ADALIIGSHFKQG 246 (251)
Q Consensus 178 ~a~~a~~~~~D~v~VTG~~---~--g~~--~~~~~l~~vr~~~~~PV~vG~GI-~~~~v~~~~~---ADGvIVGS~~~~~ 246 (251)
+++..+..|+|++-+++.. + ... ...+.++++|+.+++||+++||| +++++.+++. ||+|.+|+.|..|
T Consensus 234 ~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~Ggi~s~~~a~~~l~~G~aD~V~iGR~~i~n 313 (338)
T 1z41_A 234 FAKWMKEQGVDLIDCSSGALVHADINVFPGYQVSFAEKIREQADMATGAVGMITDGSMAEEILQNGRADLIFIGRELLRD 313 (338)
T ss_dssp HHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHCCEEEECSSCCSHHHHHHHHHTTSCSEEEECHHHHHC
T ss_pred HHHHHHHcCCCEEEEecCccccCCCCCCccchHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHcCCceEEeecHHHHhC
Confidence 4444445688888877642 1 111 24577889999999999999999 7999999984 9999999999876
Q ss_pred C
Q psy9039 247 G 247 (251)
Q Consensus 247 g 247 (251)
-
T Consensus 314 P 314 (338)
T 1z41_A 314 P 314 (338)
T ss_dssp T
T ss_pred c
Confidence 4
No 72
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=98.36 E-value=9.6e-07 Score=76.10 Aligned_cols=168 Identities=12% Similarity=0.142 Sum_probs=98.7
Q ss_pred CCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeCChHHHHHHHHHcCccceecc
Q psy9039 43 PPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQILSGCNKAALATAQAAGLDFIRAE 122 (251)
Q Consensus 43 ~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~~~~~~ia~a~g~~Fir~~ 122 (251)
+.+.++|+ |.+.+-=+ |--|.....-|| .+++++|+.+++ .|+.+-++.+++. .+--..+. ++.+-..
T Consensus 25 ~~~~~~g~-d~iHvDvm-Dg~fvpn~t~G~-------~~v~~lr~~~p~-~~~dvhLmv~dp~-~~i~~~~~-Ad~itvH 92 (227)
T 1tqx_A 25 QRMESLGA-EWIHLDVM-DMHFVPNLSFGP-------PVINNLKKYTKS-IFFDVHLMVEYPE-KYVPLLKT-SNQLTFH 92 (227)
T ss_dssp HHHHHTTC-SEEEEEEE-BSSSSSCBCCCH-------HHHHHHGGGCSS-CEEEEEEESSCGG-GGGGGCTT-SSEEEEE
T ss_pred HHHHHcCC-CEEEEEEE-eCCcCcchhcCH-------HHHHHHHHhCCC-CcEEEEEEEcCHH-HHHHHHHh-CCEEEEe
Confidence 55567899 88765333 334554555665 456778888843 5999999999853 22110001 2333221
Q ss_pred cccccccCCCceeec-CcchhHH---HHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhc-cccEEEecCCCC
Q psy9039 123 SFVFGHMADEGLMNA-QAGPLLR---YRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFF-LSDGLIITGNAT 197 (251)
Q Consensus 123 ~~~~~~~~~~Gli~~-da~e~~~---~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~-~~D~v~VTG~~~ 197 (251)
. + -.. ...+..+ ..++.|. +.--.+++. |+-+.++.+. .. .+|.+.+-....
T Consensus 93 ~--e--------a~~~~~~~~i~~~~~i~~~G~---k~gvalnp~------tp~~~~~~~l----~~g~~D~VlvmsV~p 149 (227)
T 1tqx_A 93 F--E--------ALNEDTERCIQLAKEIRDNNL---WCGISIKPK------TDVQKLVPIL----DTNLINTVLVMTVEP 149 (227)
T ss_dssp G--G--------GGTTCHHHHHHHHHHHHTTTC---EEEEEECTT------SCGGGGHHHH----TTTCCSEEEEESSCT
T ss_pred e--c--------CCccCHHHHHHHHHHHHHcCC---eEEEEeCCC------CcHHHHHHHh----hcCCcCEEEEeeecc
Confidence 0 0 011 2334455 4455554 221112211 2323333321 12 488885544333
Q ss_pred CC------CCCHHHHHHHHhcC-CCCEEEecCCChHhHHHhhc--CCEEEEeceEee
Q psy9039 198 GD------PADVSQLMSVKNAV-DLPILIGSGVTSDNVEHYMT--ADALIIGSHFKQ 245 (251)
Q Consensus 198 g~------~~~~~~l~~vr~~~-~~PV~vG~GI~~~~v~~~~~--ADGvIVGS~~~~ 245 (251)
|. +..+++++++|+.. ++++.+-|||+++|+.++.+ ||.+++||++-+
T Consensus 150 Gf~gq~f~~~~l~ki~~lr~~~~~~~I~VdGGI~~~ti~~~~~aGAd~~V~GsaIf~ 206 (227)
T 1tqx_A 150 GFGGQSFMHDMMGKVSFLRKKYKNLNIQVDGGLNIETTEISASHGANIIVAGTSIFN 206 (227)
T ss_dssp TCSSCCCCGGGHHHHHHHHHHCTTCEEEEESSCCHHHHHHHHHHTCCEEEESHHHHT
T ss_pred CCCCcccchHHHHHHHHHHHhccCCeEEEECCCCHHHHHHHHHcCCCEEEEeHHHhC
Confidence 22 23468888888877 79999999999999999986 999999999865
No 73
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=98.36 E-value=9.1e-08 Score=84.38 Aligned_cols=172 Identities=20% Similarity=0.241 Sum_probs=101.0
Q ss_pred CCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeCChHHHHHHHHHcCccceecc
Q psy9039 43 PPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQILSGCNKAALATAQAAGLDFIRAE 122 (251)
Q Consensus 43 ~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~~~~~~ia~a~g~~Fir~~ 122 (251)
+..+++|+ .+|++ .-+.|-...- .|-+..-+--..|+++|+.++ +|+---.-... ....-+..+.|++++ ++
T Consensus 25 ~iae~aGa-~av~~--l~~~p~d~r~-~gGv~Rm~dp~~I~~I~~aVs--IPVm~k~righ-~~EAqilea~GaD~I-De 96 (291)
T 3o07_A 25 KIAEKSGA-CAVMA--LESIPADMRK-SGKVCRMSDPKMIKDIMNSVS--IPVMAKVRIGH-FVEAQIIEALEVDYI-DE 96 (291)
T ss_dssp HHHHHHTC-SEEEE--CSSCHHHHHT-TTCCCCCCCHHHHHHHHTTCS--SCEEEEEETTC-HHHHHHHHHTTCSEE-EE
T ss_pred HHHHHhCc-hhhhh--ccCCCchhhh-cCCccccCCHHHHHHHHHhCC--CCeEEEEecCc-HHHHHHHHHcCCCEE-ec
Confidence 55788899 99986 3344443221 121111111346788999988 89655554433 333444456888988 33
Q ss_pred cccccccCCCceeecCcchhHHHHHhcCCCcchhhhhhHh-hccCCCCCCcccHHHHHHHhhhccccEEEecCC------
Q psy9039 123 SFVFGHMADEGLMNAQAGPLLRYRKQIGADNVLVFTDIKK-KHSSHAITADVDITETAKAASFFLSDGLIITGN------ 195 (251)
Q Consensus 123 ~~~~~~~~~~Gli~~da~e~~~~r~~l~~~~i~i~a~v~~-k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~------ 195 (251)
+.+ ++. .| .+.-+ .. +.+.|+.-.-.++.+ |..+...|+|.+.+||.
T Consensus 97 sev---ltp-----ad--------------~~~~I---~k~~f~vpfv~~~~~l~E-Alrri~eGA~mIrTtge~gtg~v 150 (291)
T 3o07_A 97 SEV---LTP-----AD--------------WTHHI---EKDKFKVPFVCGAKDLGE-ALRRINEGAAMIRTKGEAGTGDV 150 (291)
T ss_dssp ETT---SCC-----SC--------------SSCCC---CGGGCSSCEEEEESSHHH-HHHHHHHTCSEEEECCCTTSCCT
T ss_pred ccC---CCH-----HH--------------HHHHh---hhhcCCCcEEeeCCCHHH-HHHHHHCCCCEEEecCcCCCccH
Confidence 211 011 11 11111 10 112232111123444 34444469999999976
Q ss_pred -------------------C-C---------CCCCCHHHHHHHHhcCCCCEE--EecCC-ChHhHHHhhc--CCEEEEec
Q psy9039 196 -------------------A-T---------GDPADVSQLMSVKNAVDLPIL--IGSGV-TSDNVEHYMT--ADALIIGS 241 (251)
Q Consensus 196 -------------------~-~---------g~~~~~~~l~~vr~~~~~PV~--vG~GI-~~~~v~~~~~--ADGvIVGS 241 (251)
- + ...+++++++++++..++||+ ..||| |++++.+++. ||||.|||
T Consensus 151 ~~av~h~r~~~~~i~~l~g~~t~~el~~~a~~~~ad~elI~~Ike~~~IPVV~IAnGGI~TpedA~~~le~GaDGVmVGr 230 (291)
T 3o07_A 151 SEAVKHIRRITEEIKACQQLKSEDDIAKVAEEMRVPVSLLKDVLEKGKLPVVNFAAGGVATPADAALLMQLGCDGVFVGS 230 (291)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHTSCHHHHHHHHHHTSCSSCEEBCSSCCSHHHHHHHHHTTCSCEEECG
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHhhhcccccCCCHHHHHHHHHccCCCEEEecCCCCCCHHHHHHHHHhCCCEEEEch
Confidence 1 1 113567899999999999995 48999 8999999996 99999999
Q ss_pred eEeecCe
Q psy9039 242 HFKQGGR 248 (251)
Q Consensus 242 ~~~~~g~ 248 (251)
++.+.++
T Consensus 231 AI~~s~D 237 (291)
T 3o07_A 231 GIFKSSN 237 (291)
T ss_dssp GGGGSSC
T ss_pred HHhCCCC
Confidence 9877543
No 74
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=98.35 E-value=3.5e-07 Score=81.74 Aligned_cols=72 Identities=11% Similarity=0.180 Sum_probs=55.8
Q ss_pred cHHHHHHHhhhcc-ccEEEecCCC---------CC---------------C---CCCHHHHHHHHhcC-CCCEEEecCC-
Q psy9039 174 DITETAKAASFFL-SDGLIITGNA---------TG---------------D---PADVSQLMSVKNAV-DLPILIGSGV- 223 (251)
Q Consensus 174 ~i~~~a~~a~~~~-~D~v~VTG~~---------~g---------------~---~~~~~~l~~vr~~~-~~PV~vG~GI- 223 (251)
.+.++++.+...| +|++.+++.. ++ . +..++.++++|+.+ ++||+..|||
T Consensus 175 ~~~~~a~~~~~aG~~d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~sg~~~~p~~~~~i~~v~~~~~~ipvi~~GGI~ 254 (314)
T 2e6f_A 175 HFDTAAAVLNEFPLVKFVTCVNSVGNGLVIDAESESVVIKPKQGFGGLGGKYILPTALANVNAFYRRCPDKLVFGCGGVY 254 (314)
T ss_dssp HHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCCGGGGEEEEESGGGHHHHHHHHHHHHHHCTTSEEEEESSCC
T ss_pred HHHHHHHHHHhcCCceEEEEeCCCCccccccCCCCCcccccCcCCCccCcccccHHHHHHHHHHHHhcCCCCEEEECCCC
Confidence 4455566666679 9999988742 01 0 01247788999998 9999999999
Q ss_pred ChHhHHHhhc--CCEEEEeceEee
Q psy9039 224 TSDNVEHYMT--ADALIIGSHFKQ 245 (251)
Q Consensus 224 ~~~~v~~~~~--ADGvIVGS~~~~ 245 (251)
|++++.+++. ||+|.+||+|..
T Consensus 255 ~~~da~~~l~~GAd~V~ig~~~l~ 278 (314)
T 2e6f_A 255 SGEDAFLHILAGASMVQVGTALQE 278 (314)
T ss_dssp SHHHHHHHHHHTCSSEEECHHHHH
T ss_pred CHHHHHHHHHcCCCEEEEchhhHh
Confidence 6999999885 999999999985
No 75
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=98.34 E-value=1.9e-06 Score=79.28 Aligned_cols=76 Identities=17% Similarity=0.217 Sum_probs=59.4
Q ss_pred cccHHHHHHHhhhccccEEEecCCCCCC-----------------CC----CHHHHHHHHhcC--CCCEEEecCC-ChHh
Q psy9039 172 DVDITETAKAASFFLSDGLIITGNATGD-----------------PA----DVSQLMSVKNAV--DLPILIGSGV-TSDN 227 (251)
Q Consensus 172 ~~~i~~~a~~a~~~~~D~v~VTG~~~g~-----------------~~----~~~~l~~vr~~~--~~PV~vG~GI-~~~~ 227 (251)
++.+.++++.++..|+|++++|+...+. ++ .++.+.++++.+ ++||+..||| |+++
T Consensus 233 ~~~~~~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v~~~ipvI~~GGI~s~~d 312 (367)
T 3zwt_A 233 SQDKEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVSSGQD 312 (367)
T ss_dssp HHHHHHHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEEESSCCSHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHHcCCCceEEEECCCCCHHH
Confidence 3456677777777899999998753221 01 136788999998 8999999999 7999
Q ss_pred HHHhhc--CCEEEEeceEeecC
Q psy9039 228 VEHYMT--ADALIIGSHFKQGG 247 (251)
Q Consensus 228 v~~~~~--ADGvIVGS~~~~~g 247 (251)
+.+++. ||+|.|||++..+|
T Consensus 313 a~~~l~~GAd~V~vgra~l~~g 334 (367)
T 3zwt_A 313 ALEKIRAGASLVQLYTALTFWG 334 (367)
T ss_dssp HHHHHHHTCSEEEESHHHHHHC
T ss_pred HHHHHHcCCCEEEECHHHHhcC
Confidence 999886 99999999986544
No 76
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=98.29 E-value=3.2e-06 Score=77.05 Aligned_cols=158 Identities=17% Similarity=0.169 Sum_probs=99.6
Q ss_pred hHHHHHHHHHhhCCCCcCCCCccEEEEeecCC-------CCccccCCC---chH--HHHHHHHHHHHHHHhCCCCccEEE
Q psy9039 30 NMTRLCAEIRKVLPPSVPVGVQHGVIVENMHD-------VPYVLEAES---GPE--ITANMTRLCAEIRKVLPPSVPVGV 97 (251)
Q Consensus 30 ~~~~i~~~a~~~a~~l~~~Gv~D~i~ieN~~~-------~Pf~~p~~~---gp~--i~aa~~~~i~~vr~~~~~~~P~Gv 97 (251)
.++.+++.-.+.|+.+.++|+ |+|+|-=-.| -|.+....| |.. ...-..++++++|+.+++..|+++
T Consensus 146 eI~~ii~~f~~aA~~a~~aGf-DgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~avG~d~pV~v 224 (349)
T 3hgj_A 146 GMERILQAFVEGARRALRAGF-QVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVPRELPLFV 224 (349)
T ss_dssp HHHHHHHHHHHHHHHHHHTTC-CEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHSCTTSCEEE
T ss_pred HHHHHHHHHHHHHHHHHHcCC-CEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHhcCCceEEE
Confidence 467777887888888889999 9999832111 155433222 211 122234678888888753357777
Q ss_pred EEeeCChHHHHHHHHHcCccceecccccccccCCCceeecCcchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHH
Q psy9039 98 QILSGCNKAALATAQAAGLDFIRAESFVFGHMADEGLMNAQAGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITE 177 (251)
Q Consensus 98 n~~~N~~~~~~~ia~a~g~~Fir~~~~~~~~~~~~Gli~~da~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~ 177 (251)
=+-.+ +|.. .| + +.....+
T Consensus 225 Rls~~--------------~~~~-----------~g-~-----------------------------------~~~~~~~ 243 (349)
T 3hgj_A 225 RVSAT--------------DWGE-----------GG-W-----------------------------------SLEDTLA 243 (349)
T ss_dssp EEESC--------------CCST-----------TS-C-----------------------------------CHHHHHH
T ss_pred Eeccc--------------cccC-----------CC-C-----------------------------------CHHHHHH
Confidence 54221 2211 01 0 0011223
Q ss_pred HHHHhhhccccEEEec-CCCCC-------CCCCHHHHHHHHhcCCCCEEEecCC-ChHhHHHhhc---CCEEEEeceEee
Q psy9039 178 TAKAASFFLSDGLIIT-GNATG-------DPADVSQLMSVKNAVDLPILIGSGV-TSDNVEHYMT---ADALIIGSHFKQ 245 (251)
Q Consensus 178 ~a~~a~~~~~D~v~VT-G~~~g-------~~~~~~~l~~vr~~~~~PV~vG~GI-~~~~v~~~~~---ADGvIVGS~~~~ 245 (251)
+++..+..|+|++-++ |.... .....+.++++|+.+++||+++||| +++++.+++. ||.|.+|+.|+.
T Consensus 244 la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~Ggi~t~e~a~~~l~~G~aD~V~iGR~~la 323 (349)
T 3hgj_A 244 FARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRVGLRTGAVGLITTPEQAETLLQAGSADLVLLGRVLLR 323 (349)
T ss_dssp HHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHHHCCEEEECSSCCCHHHHHHHHHTTSCSEEEESTHHHH
T ss_pred HHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHHHcCceEEEECCCCCHHHHHHHHHCCCceEEEecHHHHh
Confidence 3444444688888887 32111 1124677889999999999999999 7999999884 999999999987
Q ss_pred cCee
Q psy9039 246 GGRT 249 (251)
Q Consensus 246 ~g~~ 249 (251)
|-+|
T Consensus 324 nPdl 327 (349)
T 3hgj_A 324 DPYF 327 (349)
T ss_dssp CTTH
T ss_pred CchH
Confidence 7543
No 77
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=98.29 E-value=1.9e-06 Score=80.33 Aligned_cols=77 Identities=19% Similarity=0.233 Sum_probs=60.9
Q ss_pred cccHHHHHHHhhhccccEEEecCCCC------------CC---CC----CHHHHHHHHhcC--CCCEEEecCC-ChHhHH
Q psy9039 172 DVDITETAKAASFFLSDGLIITGNAT------------GD---PA----DVSQLMSVKNAV--DLPILIGSGV-TSDNVE 229 (251)
Q Consensus 172 ~~~i~~~a~~a~~~~~D~v~VTG~~~------------g~---~~----~~~~l~~vr~~~--~~PV~vG~GI-~~~~v~ 229 (251)
+..+.++|+.++..|+|++++|+... |. ++ .++.+.++++.+ ++||+..||| |++++.
T Consensus 282 ~~~i~~iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~v~~~iPIIg~GGI~s~eDa~ 361 (415)
T 3i65_A 282 QEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIASGGIFSGLDAL 361 (415)
T ss_dssp HHHHHHHHHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEECSSCCSHHHHH
T ss_pred HHHHHHHHHHHHHcCCcEEEEeCCCcccccccccccccCCcCCccchHHHHHHHHHHHHHhCCCCCEEEECCCCCHHHHH
Confidence 34577788888888999999998532 11 11 136788999988 7999999999 799999
Q ss_pred Hhhc--CCEEEEeceEeecCe
Q psy9039 230 HYMT--ADALIIGSHFKQGGR 248 (251)
Q Consensus 230 ~~~~--ADGvIVGS~~~~~g~ 248 (251)
+++. ||+|.|||+|..+|-
T Consensus 362 e~l~aGAd~VqIgra~l~~GP 382 (415)
T 3i65_A 362 EKIEAGASVCQLYSCLVFNGM 382 (415)
T ss_dssp HHHHHTEEEEEESHHHHHHGG
T ss_pred HHHHcCCCEEEEcHHHHhcCH
Confidence 9886 999999999987653
No 78
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=98.27 E-value=1e-06 Score=76.56 Aligned_cols=183 Identities=14% Similarity=0.128 Sum_probs=111.1
Q ss_pred CCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeCChHHHHHHHHHcCccceecc
Q psy9039 43 PPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQILSGCNKAALATAQAAGLDFIRAE 122 (251)
Q Consensus 43 ~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~~~~~~ia~a~g~~Fir~~ 122 (251)
+.+.+.|+ |-+.+-+..+.-...+ ....+++++.+... .|+-+-.=... .+...-....|++-+-.+
T Consensus 38 ~~~~~~ga-d~lhvvDld~a~~~~~---------~~~~~i~~i~~~~~--~pl~vGGGIrs-~e~~~~~l~~GadkVii~ 104 (243)
T 4gj1_A 38 KEYEKAGA-KELHLVDLTGAKDPSK---------RQFALIEKLAKEVS--VNLQVGGGIRS-KEEVKALLDCGVKRVVIG 104 (243)
T ss_dssp HHHHHHTC-CEEEEEEHHHHHCGGG---------CCHHHHHHHHHHCC--SEEEEESSCCC-HHHHHHHHHTTCSEEEEC
T ss_pred HHHHHCCC-CEEEEEecCcccccch---------hHHHHHHHHHHhcC--CCeEecccccc-HHHHHHHHHcCCCEEEEc
Confidence 45788899 9988754432211111 13457778888777 78777654444 444554455666665543
Q ss_pred cccccccCCCceeecCcchhHHHHHhcCCCcchhhhhhHh-------hccCCCCCCcccHHHHHHHhhhccccEEEecCC
Q psy9039 123 SFVFGHMADEGLMNAQAGPLLRYRKQIGADNVLVFTDIKK-------KHSSHAITADVDITETAKAASFFLSDGLIITGN 195 (251)
Q Consensus 123 ~~~~~~~~~~Gli~~da~e~~~~r~~l~~~~i~i~a~v~~-------k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~ 195 (251)
.. ...+...+.+..+++|...+-+--|+.. .++.. ..++.++.+.++.....|+.-+++|--
T Consensus 105 t~----------a~~~p~li~e~~~~~g~q~iv~~iD~~~~~~~~v~~~gw~-~~~~~~~~~~~~~~~~~g~~eil~t~I 173 (243)
T 4gj1_A 105 SM----------AIKDATLCLEILKEFGSEAIVLALDTILKEDYVVAVNAWQ-EASDKKLMEVLDFYSNKGLKHILCTDI 173 (243)
T ss_dssp TT----------TTTCHHHHHHHHHHHCTTTEEEEEEEEESSSEEEC---------CCBHHHHHHHHHTTTCCEEEEEET
T ss_pred cc----------cccCCchHHHHHhcccCceEEEEEEEEeCCCCEEEecCce-ecccchHHHHHHHHhhcCCcEEEeeee
Confidence 11 1123334456667777543322212210 11111 123455666666666678999999864
Q ss_pred CC-C--CCCCHHHHHHHHhcC-CCCEEEecCC-ChHhHHHhhc-CCEEEEeceEeecCeec
Q psy9039 196 AT-G--DPADVSQLMSVKNAV-DLPILIGSGV-TSDNVEHYMT-ADALIIGSHFKQGGRTF 250 (251)
Q Consensus 196 ~~-g--~~~~~~~l~~vr~~~-~~PV~vG~GI-~~~~v~~~~~-ADGvIVGS~~~~~g~~~ 250 (251)
.. | ...+.++++++++.+ ++||+++||+ +.+++.++.. ++|+++||+| ++|++.
T Consensus 174 d~DGt~~G~d~~l~~~l~~~~~~ipviasGGv~~~~Dl~~l~~~~~gvivg~Al-~~g~i~ 233 (243)
T 4gj1_A 174 SKDGTMQGVNVRLYKLIHEIFPNICIQASGGVASLKDLENLKGICSGVIVGKAL-LDGVFS 233 (243)
T ss_dssp TC-----CCCHHHHHHHHHHCTTSEEEEESCCCSHHHHHHTTTTCSEEEECHHH-HTTSSC
T ss_pred cccccccCCCHHHHHHHHHhcCCCCEEEEcCCCCHHHHHHHHccCchhehHHHH-HCCCCC
Confidence 32 2 245789999999876 7999999999 6899999877 9999999998 556553
No 79
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=98.21 E-value=5.5e-07 Score=76.49 Aligned_cols=164 Identities=16% Similarity=0.181 Sum_probs=92.2
Q ss_pred CCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeCCh-HHHHHHHHHcCccceec
Q psy9039 43 PPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQILSGCN-KAALATAQAAGLDFIRA 121 (251)
Q Consensus 43 ~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~-~~~~~ia~a~g~~Fir~ 121 (251)
+...++|+ |.+-+. ++ |=|.. ...|...+. +.++++.. . .++|| +.|.. ..-..++...+.++++.
T Consensus 16 ~~a~~~Ga-D~iGfi-f~--~~SpR-~V~~~~a~~---i~~~~~~~-~--~~VgV--fvn~~~~~i~~~~~~~~ld~vQL 82 (205)
T 1nsj_A 16 LFSVESGA-DAVGFV-FY--PKSKR-YISPEDARR---ISVELPPF-V--FRVGV--FVNEEPEKILDVASYVQLNAVQL 82 (205)
T ss_dssp HHHHHHTC-SEEEEE-CC--TTCTT-BCCHHHHHH---HHHHSCSS-S--EEEEE--ESSCCHHHHHHHHHHHTCSEEEE
T ss_pred HHHHHcCC-CEEEEE-ec--CCCCC-cCCHHHHHH---HHHhCCCC-C--CEEEE--EeCCCHHHHHHHHHhhCCCEEEE
Confidence 66778999 999664 21 32322 244544333 33333211 1 24555 66754 34467777788899997
Q ss_pred ccccccccCCCceeecCcchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCC-----C
Q psy9039 122 ESFVFGHMADEGLMNAQAGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGN-----A 196 (251)
Q Consensus 122 ~~~~~~~~~~~Gli~~da~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~-----~ 196 (251)
+ | + - +.+.+.++|. + ++++..+..+ .. ..+ ..+..|.+|++.+-.. .
T Consensus 83 H---G----~---e--~~~~~~~l~~--~---~~vika~~v~-------~~---~~l-~~~~~~~~d~~LlD~~~~~~GG 134 (205)
T 1nsj_A 83 H---G----E---E--PIELCRKIAE--R---ILVIKAVGVS-------NE---RDM-ERALNYREFPILLDTKTPEYGG 134 (205)
T ss_dssp C---S----C---C--CHHHHHHHHT--T---SEEEEEEEES-------SH---HHH-HHHGGGTTSCEEEEESCSSSSS
T ss_pred C---C----C---C--CHHHHHHHhc--C---CCEEEEEEcC-------CH---HHH-HHHHHcCCCEEEECCCCCCCCC
Confidence 4 2 1 1 1122222221 2 3343222211 11 112 2222233777766332 3
Q ss_pred CCCCCCHHHHHHHHhcCCCCEEEecCCChHhHHHhhc---CCEEEEeceEee-cCe
Q psy9039 197 TGDPADVSQLMSVKNAVDLPILIGSGVTSDNVEHYMT---ADALIIGSHFKQ-GGR 248 (251)
Q Consensus 197 ~g~~~~~~~l~~vr~~~~~PV~vG~GI~~~~v~~~~~---ADGvIVGS~~~~-~g~ 248 (251)
+|..-+++.++.++ ..+.|++++||+||+|+++++. ++|+-|.|.+.. +|.
T Consensus 135 tG~~fdw~~l~~~~-~~~~p~~LAGGL~peNV~~ai~~~~p~gVDvsSGvE~~pG~ 189 (205)
T 1nsj_A 135 SGKTFDWSLILPYR-DRFRYLVLSGGLNPENVRSAIDVVRPFAVDVSSGVEAFPGK 189 (205)
T ss_dssp CCSCCCGGGTGGGG-GGSSCEEEESSCCTTTHHHHHHHHCCSEEEESGGGEEETTE
T ss_pred CCCccCHHHHHhhh-cCCCcEEEECCCCHHHHHHHHHhcCCCEEEECCceecCCCC
Confidence 45555777765542 3478999999999999988763 999999999986 675
No 80
>1v5x_A PRA isomerase, phosphoribosylanthranilate isomerase; alpha-beta barrel, TRPF, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.1.2.4
Probab=98.17 E-value=1e-06 Score=74.69 Aligned_cols=163 Identities=15% Similarity=0.200 Sum_probs=93.9
Q ss_pred CCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeCCh-HHHHHHHHHcCccceec
Q psy9039 43 PPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQILSGCN-KAALATAQAAGLDFIRA 121 (251)
Q Consensus 43 ~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~-~~~~~ia~a~g~~Fir~ 121 (251)
++..++|+ |.+-+. ++ |=|.. ...|...+. +.++++.. ..++|| +.|.. ..-..++...+.++++.
T Consensus 15 ~~a~~~Ga-D~iGfi-f~--~~SpR-~V~~~~a~~---i~~~~~~~---~~~VgV--fvn~~~~~i~~~~~~~~ld~vQL 81 (203)
T 1v5x_A 15 LLAEALGA-FALGFV-LA--PGSRR-RIAPEAARA---IGEALGPF---VVRVGV--FRDQPPEEVLRLMEEARLQVAQL 81 (203)
T ss_dssp HHHHHHTC-SEEEEE-CC--TTCTT-BCCHHHHHH---HHHHSCSS---SEEEEE--ESSCCHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHcCC-CEEEEE-ec--CCCCC-cCCHHHHHH---HHHhCCCC---CCEEEE--EeCCCHHHHHHHHHhhCCCEEEE
Confidence 66778999 999664 21 32322 244544333 33333211 125555 66754 34477777888999997
Q ss_pred ccccccccCCCceeecCcchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecC--CCCCC
Q psy9039 122 ESFVFGHMADEGLMNAQAGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITG--NATGD 199 (251)
Q Consensus 122 ~~~~~~~~~~~Gli~~da~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG--~~~g~ 199 (251)
+ | + |-..+.+.+.. .++++..+..++ ...+ .+..|.+|++.+-. ..+|.
T Consensus 82 H---G----~---------e~~~~~~~l~~-~~~vika~~v~~-------~~~l-----~~~~~~~d~~LlD~~~gGtG~ 132 (203)
T 1v5x_A 82 H---G----E---------EPPEWAEAVGR-FYPVIKAFPLEG-------PARP-----EWADYPAQALLLDGKRPGSGE 132 (203)
T ss_dssp C---S----C---------CCHHHHHHHTT-TSCEEEEEECSS-------SCCG-----GGGGSSCSEEEEECSSTTSCC
T ss_pred C---C----C---------CCHHHHHHhcc-CCCEEEEEEcCC-------hHhh-----hhhhcCCCEEEEcCCCCCCCC
Confidence 4 2 1 11122233321 244543333221 1122 12223378887743 24566
Q ss_pred CCCHHHHHHHHhcCCCCEEEecCCChHhHHHhhc--CCEEEEeceEee-cCe
Q psy9039 200 PADVSQLMSVKNAVDLPILIGSGVTSDNVEHYMT--ADALIIGSHFKQ-GGR 248 (251)
Q Consensus 200 ~~~~~~l~~vr~~~~~PV~vG~GI~~~~v~~~~~--ADGvIVGS~~~~-~g~ 248 (251)
.-+++.++.+. ..+.|++++||+||+|+++++. ++|+-|.|.+.. +|.
T Consensus 133 ~fdW~~l~~~~-~~~~p~~LAGGL~peNV~~ai~~~p~gVDvsSGvE~~pG~ 183 (203)
T 1v5x_A 133 AYPRAWAKPLL-ATGRRVILAGGIAPENLEEVLALRPYALDLASGVEEAPGV 183 (203)
T ss_dssp CCCGGGGHHHH-HTTSCEEECSSCCSTTHHHHHHHCCSEEEESGGGEEETTE
T ss_pred ccCHHHHHhhh-ccCCcEEEECCCCHHHHHHHHhcCCCEEEeCCceecCCCC
Confidence 66777776622 2468999999999999977655 999999999986 675
No 81
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=98.16 E-value=1.8e-06 Score=75.67 Aligned_cols=116 Identities=14% Similarity=0.235 Sum_probs=78.5
Q ss_pred cCccceecccccccccCCCceeecCcchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEec
Q psy9039 114 AGLDFIRAESFVFGHMADEGLMNAQAGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIIT 193 (251)
Q Consensus 114 ~g~~Fir~~~~~~~~~~~~Gli~~da~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VT 193 (251)
.|-+|++... .+++-...+|..+.++..+.+-.++..++ |.++++. ..++..+..|++++..-
T Consensus 90 ~gt~~iKlEv-----i~d~~~l~pD~~~tv~aa~~L~k~Gf~Vl---------py~~~D~---~~ak~l~~~G~~aVmPl 152 (268)
T 2htm_A 90 TGERWVKLEV-----IPDPTYLLPDPLETLKAAERLIEEDFLVL---------PYMGPDL---VLAKRLAALGTATVMPL 152 (268)
T ss_dssp HCCSEEBCCC-----CSCTTTTCCCHHHHHHHHHHHHHTTCEEC---------CEECSCH---HHHHHHHHHTCSCBEEB
T ss_pred cCcceeeeee-----ccCccccCcCHHHHHHHHHHHHHCCCEEe---------eccCCCH---HHHHHHHhcCCCEEEec
Confidence 4456766532 33445567888888888888733333443 2112222 44555555688988774
Q ss_pred CCC--CCCC-CCHHHHHHHHh-cCC-CCEEEecCC-ChHhHHHhhc--CCEEEEeceEeec
Q psy9039 194 GNA--TGDP-ADVSQLMSVKN-AVD-LPILIGSGV-TSDNVEHYMT--ADALIIGSHFKQG 246 (251)
Q Consensus 194 G~~--~g~~-~~~~~l~~vr~-~~~-~PV~vG~GI-~~~~v~~~~~--ADGvIVGS~~~~~ 246 (251)
|+- +|.. .+.+.++++++ ..+ +||++++|| ||++++.+++ ||||.|||+|.+.
T Consensus 153 g~pIGsG~Gi~~~~~L~~i~~~~~~~vPVI~~GGI~tpsDAa~AmeLGAdgVlVgSAI~~a 213 (268)
T 2htm_A 153 AAPIGSGWGVRTRALLELFAREKASLPPVVVDAGLGLPSHAAEVMELGLDAVLVNTAIAEA 213 (268)
T ss_dssp SSSTTTCCCSTTHHHHHHHHHTTTTSSCBEEESCCCSHHHHHHHHHTTCCEEEESHHHHTS
T ss_pred CccCcCCcccCCHHHHHHHHHhcCCCCeEEEeCCCCCHHHHHHHHHcCCCEEEEChHHhCC
Confidence 432 2222 24778999998 678 999999999 7999999997 9999999998753
No 82
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=98.14 E-value=1.3e-06 Score=74.75 Aligned_cols=60 Identities=22% Similarity=0.421 Sum_probs=36.0
Q ss_pred ccEEEecCC--CCCCCCCH-HHHHHHHhcC-CCCEEEecCCC-hHhHHHhhc--CCEEEEeceEeecC
Q psy9039 187 SDGLIITGN--ATGDPADV-SQLMSVKNAV-DLPILIGSGVT-SDNVEHYMT--ADALIIGSHFKQGG 247 (251)
Q Consensus 187 ~D~v~VTG~--~~g~~~~~-~~l~~vr~~~-~~PV~vG~GI~-~~~v~~~~~--ADGvIVGS~~~~~g 247 (251)
.++++ ||. ++-.+... ..++.+|+.. ++||++||||+ +++++.+.. +||++|||++.+-.
T Consensus 140 ~~~iG-tG~~~~t~~~~~~~~~~~~ir~~~~~~~ii~ggGI~~~~~~~~~~~~gaDgvlVGsAi~~~~ 206 (219)
T 2h6r_A 140 PELIG-TGIPVSKANPEVVEGTVRAVKEINKDVKVLCGAGISKGEDVKAALDLGAEGVLLASGVVKAK 206 (219)
T ss_dssp CC---------------CSHHHHHHHHHHCTTCEEEECSSCCSHHHHHHHHTTTCCCEEESHHHHTCS
T ss_pred ccccc-cCCCCccCCHHHHHHHHHHHHhccCCCeEEEEeCcCcHHHHHHHhhCCCCEEEEcHHHhCcc
Confidence 34545 663 22222223 4455566665 79999999996 677777765 99999999998754
No 83
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=98.13 E-value=8.7e-06 Score=76.59 Aligned_cols=74 Identities=19% Similarity=0.195 Sum_probs=58.2
Q ss_pred cHHHHHHHhhhccccEEEecCCCCCCC-------------------CCHHHHHHHHhcC--CCCEEEecCC-ChHhHHHh
Q psy9039 174 DITETAKAASFFLSDGLIITGNATGDP-------------------ADVSQLMSVKNAV--DLPILIGSGV-TSDNVEHY 231 (251)
Q Consensus 174 ~i~~~a~~a~~~~~D~v~VTG~~~g~~-------------------~~~~~l~~vr~~~--~~PV~vG~GI-~~~~v~~~ 231 (251)
.+.++|+.++..|+|++++|+...... ..++.++++++.+ ++||+..||| |++++.+.
T Consensus 312 d~~~iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~~~iPVIg~GGI~s~~DA~e~ 391 (443)
T 1tv5_A 312 QKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIASGGIFSGLDALEK 391 (443)
T ss_dssp HHHHHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTTTCSCEEEESSCCSHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHHcCCCCcEEEECCCCCHHHHHHH
Confidence 466677777778999999998632110 0246788999988 8999999999 79999998
Q ss_pred hc--CCEEEEeceEeecC
Q psy9039 232 MT--ADALIIGSHFKQGG 247 (251)
Q Consensus 232 ~~--ADGvIVGS~~~~~g 247 (251)
+. ||+|.+||+|..+|
T Consensus 392 l~aGAd~Vqigrall~~g 409 (443)
T 1tv5_A 392 IEAGASVCQLYSCLVFNG 409 (443)
T ss_dssp HHTTEEEEEESHHHHHHG
T ss_pred HHcCCCEEEEcHHHHhcC
Confidence 85 99999999987533
No 84
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=98.07 E-value=7.7e-06 Score=74.50 Aligned_cols=157 Identities=14% Similarity=0.155 Sum_probs=98.8
Q ss_pred hHHHHHHHHHhhCCCCcCCCCccEEEEe-------ecCCCCccccCCCch----H-HHHHHHHHHHHHHHhCCCCccEEE
Q psy9039 30 NMTRLCAEIRKVLPPSVPVGVQHGVIVE-------NMHDVPYVLEAESGP----E-ITANMTRLCAEIRKVLPPSVPVGV 97 (251)
Q Consensus 30 ~~~~i~~~a~~~a~~l~~~Gv~D~i~ie-------N~~~~Pf~~p~~~gp----~-i~aa~~~~i~~vr~~~~~~~P~Gv 97 (251)
.++.+++.-.+.|+.+.++|+ |+|+|- |.|.-|.+..-.|.+ + ...-..++++++|+.++...|+++
T Consensus 137 eI~~ii~~f~~AA~~a~~aGf-DgVEih~ahGYLl~qFlsp~~N~R~D~yGGslenR~rf~~eiv~aVr~avg~d~pv~v 215 (343)
T 3kru_A 137 EIKSIVKAFGEAAKRANLAGY-DVVEIHAAHGYLIHEFLSPLSNKRKDEYGNSIENRARFLIEVIDEVRKNWPENKPIFV 215 (343)
T ss_dssp HHHHHHHHHHHHHHHHHHHTC-SEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHTSCTTSCEEE
T ss_pred HHHHHHHHHHHHHhhccccCC-ceEEEecccchhHHHhhcccccccchhhccchHhHHHHHHHHHHHHHhcCCccCCeEE
Confidence 467777777777888889999 999984 224466654333321 1 122335688889988753357777
Q ss_pred EEeeCChHHHHHHHHHcCccceecccccccccCCCceeecCcchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHH
Q psy9039 98 QILSGCNKAALATAQAAGLDFIRAESFVFGHMADEGLMNAQAGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITE 177 (251)
Q Consensus 98 n~~~N~~~~~~~ia~a~g~~Fir~~~~~~~~~~~~Gli~~da~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~ 177 (251)
=+-.+ +|.. .|. + .....+
T Consensus 216 Rls~~--------------~~~~-----------~g~---~---------------------------------~~~~~~ 234 (343)
T 3kru_A 216 RVSAD--------------DYME-----------GGI---N---------------------------------IDMMVE 234 (343)
T ss_dssp EEECC--------------CSST-----------TSC---C---------------------------------HHHHHH
T ss_pred Eeech--------------hhhc-----------cCc---c---------------------------------HHHHHH
Confidence 54321 2311 010 0 011223
Q ss_pred HHHHhhhccccEEEec-CCCCC------CCCCHHHHHHHHhcCCCCEEEecCC-ChHhHHHhhc---CCEEEEeceEeec
Q psy9039 178 TAKAASFFLSDGLIIT-GNATG------DPADVSQLMSVKNAVDLPILIGSGV-TSDNVEHYMT---ADALIIGSHFKQG 246 (251)
Q Consensus 178 ~a~~a~~~~~D~v~VT-G~~~g------~~~~~~~l~~vr~~~~~PV~vG~GI-~~~~v~~~~~---ADGvIVGS~~~~~ 246 (251)
+++..+.. +|++-++ |.... .....+.++++|+.+++||++.||| +++++.+++. ||+|.+|..|..|
T Consensus 235 ~a~~l~~~-vd~i~vs~g~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~Ggi~t~e~Ae~~l~~G~aD~V~iGR~~lan 313 (343)
T 3kru_A 235 YINMIKDK-VDLIDVSSGGLLNVDINLYPGYQVKYAETIKKRCNIKTSAVGLITTQELAEEILSNERADLVALGRELLRN 313 (343)
T ss_dssp HHHHHTTT-CSEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHTCEEEEESSCCCHHHHHHHHHTTSCSEEEESHHHHHC
T ss_pred HHHHhhcc-ccEEeccCCceEeeeecccCceeehHHHHHHHhcCcccceeeeeeHHHHHHHHHhchhhHHHHHHHHHhcC
Confidence 34444444 7777764 32111 1124677889999999999999999 6999999884 9999999998876
Q ss_pred Cee
Q psy9039 247 GRT 249 (251)
Q Consensus 247 g~~ 249 (251)
-.|
T Consensus 314 Pdl 316 (343)
T 3kru_A 314 PYW 316 (343)
T ss_dssp TTH
T ss_pred CeE
Confidence 443
No 85
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=98.07 E-value=1.1e-05 Score=72.81 Aligned_cols=72 Identities=18% Similarity=0.200 Sum_probs=55.8
Q ss_pred cHHHHHHHhhhccccEEEecCCCCCC---------------C------CCHHHHHHHHhcC--CCCEEEecCC-ChHhHH
Q psy9039 174 DITETAKAASFFLSDGLIITGNATGD---------------P------ADVSQLMSVKNAV--DLPILIGSGV-TSDNVE 229 (251)
Q Consensus 174 ~i~~~a~~a~~~~~D~v~VTG~~~g~---------------~------~~~~~l~~vr~~~--~~PV~vG~GI-~~~~v~ 229 (251)
.+.++++.+...|+|++.||+...+. . ..++.++++|+.+ ++||+..||| |++++.
T Consensus 226 ~~~~~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~~~~~~ipVi~~GGI~~~~da~ 305 (336)
T 1f76_A 226 ELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLELNGRLPIIGVGGIDSVIAAR 305 (336)
T ss_dssp HHHHHHHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHHHHHHTTSSCEEEESSCCSHHHHH
T ss_pred HHHHHHHHHHHcCCcEEEEeCCcccccccccccccccCCCcCCchhHHHHHHHHHHHHHHhCCCCCEEEECCCCCHHHHH
Confidence 34556677767899999998752110 0 0136688899888 8999999999 799999
Q ss_pred Hhhc--CCEEEEeceEee
Q psy9039 230 HYMT--ADALIIGSHFKQ 245 (251)
Q Consensus 230 ~~~~--ADGvIVGS~~~~ 245 (251)
+++. ||+|.+||+|+.
T Consensus 306 ~~l~~GAd~V~igr~~l~ 323 (336)
T 1f76_A 306 EKIAAGASLVQIYSGFIF 323 (336)
T ss_dssp HHHHHTCSEEEESHHHHH
T ss_pred HHHHCCCCEEEeeHHHHh
Confidence 9996 999999999875
No 86
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=98.04 E-value=8.1e-06 Score=74.76 Aligned_cols=158 Identities=15% Similarity=0.098 Sum_probs=98.8
Q ss_pred hHHHHHHHHHhhCCCCcCCCCccEEEEeecCC-------CCccccCCC---chH--HHHHHHHHHHHHHHhCCCCccEEE
Q psy9039 30 NMTRLCAEIRKVLPPSVPVGVQHGVIVENMHD-------VPYVLEAES---GPE--ITANMTRLCAEIRKVLPPSVPVGV 97 (251)
Q Consensus 30 ~~~~i~~~a~~~a~~l~~~Gv~D~i~ieN~~~-------~Pf~~p~~~---gp~--i~aa~~~~i~~vr~~~~~~~P~Gv 97 (251)
.++.+++.-.+.|+...++|+ |+|+|-=-.| -|.+..-.| |.. ...-..++++++|+.++...|+++
T Consensus 152 eI~~ii~~f~~aA~~a~~aGf-DgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~d~pV~v 230 (363)
T 3l5l_A 152 DIARVKQDFVDAARRARDAGF-EWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVREVWPENLPLTA 230 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHHTC-SEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHTTSCTTSCEEE
T ss_pred HHHHHHHHHHHHHHHHHHcCC-CEEEEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHHHHHcCCCceEEE
Confidence 467777888888888889999 9999842111 355432222 211 112244577888887753357776
Q ss_pred EEeeCChHHHHHHHHHcCccceecccccccccCCCceeecCcchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHH
Q psy9039 98 QILSGCNKAALATAQAAGLDFIRAESFVFGHMADEGLMNAQAGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITE 177 (251)
Q Consensus 98 n~~~N~~~~~~~ia~a~g~~Fir~~~~~~~~~~~~Gli~~da~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~ 177 (251)
=+-.+ +|.. .|-+ . .....+
T Consensus 231 Ris~~--------------~~~~-----------~G~~-------------------~----------------~~~~~~ 250 (363)
T 3l5l_A 231 RFGVL--------------EYDG-----------RDEQ-------------------T----------------LEESIE 250 (363)
T ss_dssp EEEEE--------------CSSS-----------CHHH-------------------H----------------HHHHHH
T ss_pred Eecch--------------hcCC-----------CCCC-------------------C----------------HHHHHH
Confidence 54321 2211 0000 0 011223
Q ss_pred HHHHhhhccccEEEecCCCC--------CCCCCHHHHHHHHhcCCCCEEEecCC-ChHhHHHhhc---CCEEEEeceEee
Q psy9039 178 TAKAASFFLSDGLIITGNAT--------GDPADVSQLMSVKNAVDLPILIGSGV-TSDNVEHYMT---ADALIIGSHFKQ 245 (251)
Q Consensus 178 ~a~~a~~~~~D~v~VTG~~~--------g~~~~~~~l~~vr~~~~~PV~vG~GI-~~~~v~~~~~---ADGvIVGS~~~~ 245 (251)
+++..+..|+|++-+++... +.....+.++++|+.+++||+++||| +++++.+++. ||.|.+|+.|+.
T Consensus 251 la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~GgI~s~e~a~~~l~~G~aD~V~iGR~~la 330 (363)
T 3l5l_A 251 LARRFKAGGLDLLSVSVGFTIPDTNIPWGPAFMGPIAERVRREAKLPVTSAWGFGTPQLAEAALQANQLDLVSVGRAHLA 330 (363)
T ss_dssp HHHHHHHTTCCEEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHTCCEEECSSTTSHHHHHHHHHTTSCSEEECCHHHHH
T ss_pred HHHHHHHcCCCEEEEecCccccccccCCCcchhHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHCCCccEEEecHHHHh
Confidence 34444446888888875321 11124577889999999999999999 6999999884 999999999887
Q ss_pred cCe
Q psy9039 246 GGR 248 (251)
Q Consensus 246 ~g~ 248 (251)
|-.
T Consensus 331 nPd 333 (363)
T 3l5l_A 331 DPH 333 (363)
T ss_dssp CTT
T ss_pred Cch
Confidence 643
No 87
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=98.03 E-value=2.5e-05 Score=75.21 Aligned_cols=156 Identities=19% Similarity=0.126 Sum_probs=89.7
Q ss_pred CCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeCChHHHHHHHHHcCccceecc
Q psy9039 43 PPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQILSGCNKAALATAQAAGLDFIRAE 122 (251)
Q Consensus 43 ~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~~~~~~ia~a~g~~Fir~~ 122 (251)
+.+.++|+ +.|.+ ..+-. +.... ....+.++++-+... +|+.+ |+. ..+|.+.|++.++..
T Consensus 32 e~al~~Gv-~~vQl----R~K~~----~~~~~-~~~a~~l~~l~~~~~--v~liI----ND~---~dlA~~~gAdGVHLg 92 (540)
T 3nl6_A 32 EAGLQNGV-TLVQI----REKDA----DTKFF-IEEALQIKELCHAHN--VPLII----NDR---IDVAMAIGADGIHVG 92 (540)
T ss_dssp HHHHHTTC-SEEEE----CCSSS----CTTHH-HHHHHHHHHHHHHTT--CCEEE----CSC---SHHHHHTTCSEEEEC
T ss_pred HHHHHCCC-CEEEE----ecCCC----CHHHH-HHHHHHHHHHHHhcC--CEEEE----eCc---HHHHHHcCCCEEEEC
Confidence 33457899 99974 22211 11111 223333344444455 56555 452 567777888877742
Q ss_pred cccccccCCCceeecCcchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhcc---ccEEEe-----cC
Q psy9039 123 SFVFGHMADEGLMNAQAGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFL---SDGLII-----TG 194 (251)
Q Consensus 123 ~~~~~~~~~~Gli~~da~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~---~D~v~V-----TG 194 (251)
.+. ......|+.++... ++. .|.+ +.++ ++.|...| +|++++ |.
T Consensus 93 --------q~d------l~~~~ar~~lg~~~--iiG-----~S~h------t~ee-a~~A~~~G~~~aDYv~~Gpvf~T~ 144 (540)
T 3nl6_A 93 --------QDD------MPIPMIRKLVGPDM--VIG-----WSVG------FPEE-VDELSKMGPDMVDYIGVGTLFPTL 144 (540)
T ss_dssp --------TTS------SCHHHHHHHHCTTS--EEE-----EEEC------SHHH-HHHHHHTCC--CCEEEESCCSCCC
T ss_pred --------hhh------cCHHHHHHHhCCCC--EEE-----EECC------CHHH-HHHHHHcCCCCCCEEEEcCCCCCC
Confidence 221 12344566665422 111 0112 3333 45565557 999988 32
Q ss_pred CCCCCC---CCHHHHHHHHhc------CCCCEEEecCCChHhHHHhh---------c-CCEEEEeceEee
Q psy9039 195 NATGDP---ADVSQLMSVKNA------VDLPILIGSGVTSDNVEHYM---------T-ADALIIGSHFKQ 245 (251)
Q Consensus 195 ~~~g~~---~~~~~l~~vr~~------~~~PV~vG~GI~~~~v~~~~---------~-ADGvIVGS~~~~ 245 (251)
++.+.. ..++.++++++. .++|+++-|||+++|+.+++ . |||+.|+|+|..
T Consensus 145 tK~~~~~~~~G~~~l~~i~~~~~~~~~~~iPvvAIGGI~~~ni~~v~~~~~~~g~~~GadgvAVvsaI~~ 214 (540)
T 3nl6_A 145 TKKNPKKAPMGTAGAIRVLDALERNNAHWCRTVGIGGLHPDNIERVLYQCVSSNGKRSLDGICVVSDIIA 214 (540)
T ss_dssp CCC----CCCHHHHHHHHHHHHHHTTCTTCEEEEESSCCTTTHHHHHHHCBCTTSSCBCSCEEESHHHHT
T ss_pred CCCCcCCCCCCHHHHHHHHHHHHhhccCCCCEEEEcCCCHHHHHHHHHhhcccccccCceEEEEeHHHhc
Confidence 333321 125667766654 48999999999999999887 4 999999999875
No 88
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=98.01 E-value=8.1e-06 Score=75.86 Aligned_cols=71 Identities=20% Similarity=0.345 Sum_probs=52.3
Q ss_pred cHHHHHHHhhhccccEEEecCCCCC----------C-CCCHHHHHHHHhc---CCCCEEEecCC-ChHhHHHhhc--CCE
Q psy9039 174 DITETAKAASFFLSDGLIITGNATG----------D-PADVSQLMSVKNA---VDLPILIGSGV-TSDNVEHYMT--ADA 236 (251)
Q Consensus 174 ~i~~~a~~a~~~~~D~v~VTG~~~g----------~-~~~~~~l~~vr~~---~~~PV~vG~GI-~~~~v~~~~~--ADG 236 (251)
...+.++.+...|+|++++ |...| . .+....+.++++. .++||++.||| +++++.+++. ||+
T Consensus 193 ~t~e~A~~a~~aGAD~I~v-G~g~Gs~~~tr~~~g~g~p~~~al~~v~~~~~~~~IPVIA~GGI~~~~di~kalalGAd~ 271 (400)
T 3ffs_A 193 VTEEATKELIENGADGIKV-GIGPGSICTTRIVAGVGVPQITAIEKCSSVASKFGIPIIADGGIRYSGDIGKALAVGASS 271 (400)
T ss_dssp CSHHHHHHHHHTTCSEEEE-CC---------CCSCBCCCHHHHHHHHHHHHTTTTCCEEEESCCCSHHHHHHHHTTTCSE
T ss_pred CCHHHHHHHHHcCCCEEEE-eCCCCcCcccccccccchhHHHHHHHHHHHHHhcCCCEEecCCCCCHHHHHHHHHcCCCE
Confidence 3355667777789999999 42111 1 2345667776654 57999999999 7999999996 999
Q ss_pred EEEeceEee
Q psy9039 237 LIIGSHFKQ 245 (251)
Q Consensus 237 vIVGS~~~~ 245 (251)
|.+||+|..
T Consensus 272 V~vGt~f~~ 280 (400)
T 3ffs_A 272 VMIGSILAG 280 (400)
T ss_dssp EEECGGGTT
T ss_pred EEEChHHhc
Confidence 999999865
No 89
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=98.00 E-value=7.1e-06 Score=74.81 Aligned_cols=73 Identities=10% Similarity=0.207 Sum_probs=59.1
Q ss_pred HHHHHHHhhhccccEEEecCCCCC-----C------CCCHHHHHHHHhcC-CCCEEEecCC-ChHhHHHhhc-CCEEEEe
Q psy9039 175 ITETAKAASFFLSDGLIITGNATG-----D------PADVSQLMSVKNAV-DLPILIGSGV-TSDNVEHYMT-ADALIIG 240 (251)
Q Consensus 175 i~~~a~~a~~~~~D~v~VTG~~~g-----~------~~~~~~l~~vr~~~-~~PV~vG~GI-~~~~v~~~~~-ADGvIVG 240 (251)
..++++.++..|+|++.|+|.... . +.+.+.++++|+.+ ++||+++||| |++++.+++. ||+|.+|
T Consensus 146 ~~~~a~~l~~aG~d~I~V~~r~~~~g~~g~~~~~~~~~~~~~i~~ik~~~~~iPVianGgI~s~eda~~~l~GaD~V~iG 225 (350)
T 3b0p_A 146 LAQSVEAMAEAGVKVFVVHARSALLALSTKANREIPPLRHDWVHRLKGDFPQLTFVTNGGIRSLEEALFHLKRVDGVMLG 225 (350)
T ss_dssp HHHHHHHHHHTTCCEEEEECSCBC----------CCCCCHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHTTSSEEEEC
T ss_pred HHHHHHHHHHcCCCEEEEecCchhcccCcccccCCCcccHHHHHHHHHhCCCCeEEEECCcCCHHHHHHHHhCCCEEEEC
Confidence 455566666689999999985421 1 12578899999998 9999999999 7999999998 9999999
Q ss_pred ceEeecC
Q psy9039 241 SHFKQGG 247 (251)
Q Consensus 241 S~~~~~g 247 (251)
+++..|-
T Consensus 226 Ra~l~~P 232 (350)
T 3b0p_A 226 RAVYEDP 232 (350)
T ss_dssp HHHHHCG
T ss_pred HHHHhCc
Confidence 9987664
No 90
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=98.00 E-value=2.1e-05 Score=73.48 Aligned_cols=70 Identities=16% Similarity=0.127 Sum_probs=51.1
Q ss_pred HHHhhh-ccccEEEecCCCC----------CCCCCHHHHHHHHhcC--CCCEEEecCC-ChHhHHHhhc-CCEEEEeceE
Q psy9039 179 AKAASF-FLSDGLIITGNAT----------GDPADVSQLMSVKNAV--DLPILIGSGV-TSDNVEHYMT-ADALIIGSHF 243 (251)
Q Consensus 179 a~~a~~-~~~D~v~VTG~~~----------g~~~~~~~l~~vr~~~--~~PV~vG~GI-~~~~v~~~~~-ADGvIVGS~~ 243 (251)
++..+. .|+|++-|++... +.......++++|+.+ ++||++.||| +++++.++++ ||.|.+|..|
T Consensus 270 a~~L~~~~Gvd~I~vs~g~~~~~~~~~~~~g~~~~~~~a~~Ik~~v~~~iPVI~~GgI~t~e~Ae~~L~~aDlVaiGR~~ 349 (419)
T 3l5a_A 270 IDWVMDVSNIQYLAIASWGRHIYQNTSRTPGDHFGRPVNQIVYEHLAGRIPLIASGGINSPESALDALQHADMVGMSSPF 349 (419)
T ss_dssp HHHHHHHSCCCCEEECCTTCCGGGCBCCCSSTTTTSBHHHHHHHHHTTSSCEEECSSCCSHHHHHHHGGGCSEEEESTHH
T ss_pred HHHHHhhcCCcEEEEeeCCccccccccCCCCccccHHHHHHHHHHcCCCCeEEEECCCCCHHHHHHHHHhCCcHHHHHHH
Confidence 343344 5777777776431 1111235677888887 6999999999 7999999998 9999999999
Q ss_pred eecCe
Q psy9039 244 KQGGR 248 (251)
Q Consensus 244 ~~~g~ 248 (251)
+.|-.
T Consensus 350 IanPd 354 (419)
T 3l5a_A 350 VTEPD 354 (419)
T ss_dssp HHCTT
T ss_pred HHCcH
Confidence 87643
No 91
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=98.00 E-value=6.2e-06 Score=71.06 Aligned_cols=75 Identities=13% Similarity=0.139 Sum_probs=60.5
Q ss_pred ccHHHHHHHhhhccccEEEecCCCC---CCCCCHHHHHHHHhcCCCCEEEecCC-ChHhHHHhhc--CCEEEEeceEeec
Q psy9039 173 VDITETAKAASFFLSDGLIITGNAT---GDPADVSQLMSVKNAVDLPILIGSGV-TSDNVEHYMT--ADALIIGSHFKQG 246 (251)
Q Consensus 173 ~~i~~~a~~a~~~~~D~v~VTG~~~---g~~~~~~~l~~vr~~~~~PV~vG~GI-~~~~v~~~~~--ADGvIVGS~~~~~ 246 (251)
....+.++.....|+|.+.++.... +...+.+.++++++.+++||+++||| +++++.+++. ||++++||.+..+
T Consensus 35 ~~~~~~a~~~~~~G~~~i~v~d~~~~~~~~~~~~~~i~~i~~~~~ipvi~~Ggi~~~~~~~~~l~~Gad~V~ig~~~l~d 114 (247)
T 3tdn_A 35 ILLRDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLRGADKVSINTAAVEN 114 (247)
T ss_dssp EEHHHHHHHHHHTTCSEEEEEETTTTTCSSCCCHHHHHHHGGGCCSCEEEESCCCSHHHHHHHHHTTCSEECCSHHHHHC
T ss_pred CCHHHHHHHHHHcCCCEEEEEecCcccCCCcccHHHHHHHHHhCCCCEEEeCCCCCHHHHHHHHHcCCCeeehhhHHhhC
Confidence 4566777777778999998876432 23446789999999999999999999 6899999986 9999999987765
Q ss_pred C
Q psy9039 247 G 247 (251)
Q Consensus 247 g 247 (251)
-
T Consensus 115 p 115 (247)
T 3tdn_A 115 P 115 (247)
T ss_dssp T
T ss_pred h
Confidence 3
No 92
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=97.96 E-value=9.3e-05 Score=67.78 Aligned_cols=71 Identities=14% Similarity=0.108 Sum_probs=54.9
Q ss_pred HHHHHhhhccccEEEecCCC--CCCCCCHHHHHHHHhcCCCCEEEecCCChHhHHHhhc---CCEEEEeceEeecC
Q psy9039 177 ETAKAASFFLSDGLIITGNA--TGDPADVSQLMSVKNAVDLPILIGSGVTSDNVEHYMT---ADALIIGSHFKQGG 247 (251)
Q Consensus 177 ~~a~~a~~~~~D~v~VTG~~--~g~~~~~~~l~~vr~~~~~PV~vG~GI~~~~v~~~~~---ADGvIVGS~~~~~g 247 (251)
++++..+.+|+|++-+++.. .......+.++++|+.+++||+++|||+++++.+++. ||+|.+|+.|..|-
T Consensus 255 ~~a~~l~~~G~d~i~v~~~~~~~~~~~~~~~~~~v~~~~~iPvi~~Ggit~~~a~~~l~~g~aD~V~~gR~~l~~P 330 (364)
T 1vyr_A 255 YLIEELAKRGIAYLHMSETDLAGGKPYSEAFRQKVRERFHGVIIGAGAYTAEKAEDLIGKGLIDAVAFGRDYIANP 330 (364)
T ss_dssp HHHHHHHHTTCSEEEEECCBTTBCCCCCHHHHHHHHHHCCSEEEEESSCCHHHHHHHHHTTSCSEEEESHHHHHCT
T ss_pred HHHHHHHHhCCCEEEEecCcccCCCcccHHHHHHHHHHCCCCEEEECCcCHHHHHHHHHCCCccEEEECHHHHhCh
Confidence 34555555689999887631 1112246778899999999999999999999999984 99999999987763
No 93
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=97.95 E-value=2.1e-05 Score=68.71 Aligned_cols=141 Identities=12% Similarity=0.125 Sum_probs=95.1
Q ss_pred HHHHHHHHhCCCCccEEEEEeeCChHHHHHHHHHcCccceecccccccccCCCceeecCcchhHHHHHhcCCCcchhhhh
Q psy9039 80 RLCAEIRKVLPPSVPVGVQILSGCNKAALATAQAAGLDFIRAESFVFGHMADEGLMNAQAGPLLRYRKQIGADNVLVFTD 159 (251)
Q Consensus 80 ~~i~~vr~~~~~~~P~Gvn~~~N~~~~~~~ia~a~g~~Fir~~~~~~~~~~~~Gli~~da~e~~~~r~~l~~~~i~i~a~ 159 (251)
.-++++|+.++ +|+---=|.-+ .++...+.+.|++.+-... +.+.. .+..++.++.+++|. ..+.+
T Consensus 91 ~dL~~ir~~v~--lPvLrKDfi~~-~~qi~ea~~~GAD~ilLi~---a~l~~-----~~l~~l~~~a~~lGl---~~lvE 156 (251)
T 1i4n_A 91 AFVRAARNLTC--RPILAKDFYID-TVQVKLASSVGADAILIIA---RILTA-----EQIKEIYEAAEELGM---DSLVE 156 (251)
T ss_dssp HHHHHHHTTCC--SCEEEECCCCS-THHHHHHHHTTCSEEEEEG---GGSCH-----HHHHHHHHHHHTTTC---EEEEE
T ss_pred HHHHHHHHhCC--CCEEEeeCCCC-HHHHHHHHHcCCCEEEEec---ccCCH-----HHHHHHHHHHHHcCC---eEEEE
Confidence 34577888888 79776555545 4566668889998877631 11111 235666777777765 23222
Q ss_pred hHhhccCCCCCCcccHHHHHHHhhhc-cccEEEecCCCC-CCCCCHHHHHHHHhcC--CCCEEEecCC-ChHhHHHhhc-
Q psy9039 160 IKKKHSSHAITADVDITETAKAASFF-LSDGLIITGNAT-GDPADVSQLMSVKNAV--DLPILIGSGV-TSDNVEHYMT- 233 (251)
Q Consensus 160 v~~k~~~~~~~~~~~i~~~a~~a~~~-~~D~v~VTG~~~-g~~~~~~~l~~vr~~~--~~PV~vG~GI-~~~~v~~~~~- 233 (251)
++ + .+.++.|... |+|.++++-..- +...+++...++.+.. +.+++..||| |++++..+..
T Consensus 157 v~------------~-~eE~~~A~~l~g~~iIGinnr~l~t~~~d~~~~~~l~~~ip~~~~vIaEsGI~t~edv~~~~~~ 223 (251)
T 1i4n_A 157 VH------------S-REDLEKVFSVIRPKIIGINTRDLDTFEIKKNVLWELLPLVPDDTVVVAESGIKDPRELKDLRGK 223 (251)
T ss_dssp EC------------S-HHHHHHHHTTCCCSEEEEECBCTTTCCBCTTHHHHHGGGSCTTSEEEEESCCCCGGGHHHHTTT
T ss_pred eC------------C-HHHHHHHHhcCCCCEEEEeCcccccCCCCHHHHHHHHHhCCCCCEEEEeCCCCCHHHHHHHHHh
Confidence 21 2 3335666666 999999987532 2344566666666665 5899999999 6999999998
Q ss_pred CCEEEEeceEeecC
Q psy9039 234 ADALIIGSHFKQGG 247 (251)
Q Consensus 234 ADGvIVGS~~~~~g 247 (251)
+||+.|||+|++..
T Consensus 224 a~avLVG~aimr~~ 237 (251)
T 1i4n_A 224 VNAVLVGTSIMKAE 237 (251)
T ss_dssp CSEEEECHHHHHCS
T ss_pred CCEEEEcHHHcCCc
Confidence 99999999998754
No 94
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=97.93 E-value=1.8e-05 Score=72.90 Aligned_cols=158 Identities=11% Similarity=0.039 Sum_probs=96.4
Q ss_pred hHHHHHHHHHhhCCCCcCCCCccEEEEeecCC-------CCccccCCC---ch--HHHHHHHHHHHHHHHhCCCCccEEE
Q psy9039 30 NMTRLCAEIRKVLPPSVPVGVQHGVIVENMHD-------VPYVLEAES---GP--EITANMTRLCAEIRKVLPPSVPVGV 97 (251)
Q Consensus 30 ~~~~i~~~a~~~a~~l~~~Gv~D~i~ieN~~~-------~Pf~~p~~~---gp--~i~aa~~~~i~~vr~~~~~~~P~Gv 97 (251)
.++.+++.-.+.|+.+.++|+ |+|+|-=-.| -|.+....| |. -...-..++++++|+.++.. |+++
T Consensus 160 eI~~~i~~f~~aA~~a~~aGf-DgVEIh~a~GYLl~QFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~-~v~v 237 (377)
T 2r14_A 160 EIPGIVEDYRQAAQRAKRAGF-DMVEVHAANACLPNQFLATGTNRRTDQYGGSIENRARFPLEVVDAVAEVFGPE-RVGI 237 (377)
T ss_dssp GHHHHHHHHHHHHHHHHHHTC-SEEEEEECTTCHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGG-GEEE
T ss_pred HHHHHHHHHHHHHHHHHHcCC-CEEEEcCcccchHHhccCCccccCCCccCcchhhchHHHHHHHHHHHHHcCCC-cEEE
Confidence 577777777788877788999 9999721111 255433222 21 11222345778888877633 6666
Q ss_pred EEeeCChHHHHHHHHHcCccceecccccccccCCCceeecCcchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHH
Q psy9039 98 QILSGCNKAALATAQAAGLDFIRAESFVFGHMADEGLMNAQAGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITE 177 (251)
Q Consensus 98 n~~~N~~~~~~~ia~a~g~~Fir~~~~~~~~~~~~Gli~~da~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~ 177 (251)
=+-.+ ++.. +. .+| .+.....+
T Consensus 238 rls~~--------------~~~~-----~~---~~~------------------------------------~~~~~~~~ 259 (377)
T 2r14_A 238 RLTPF--------------LELF-----GL---TDD------------------------------------EPEAMAFY 259 (377)
T ss_dssp EECTT--------------CCCT-----TC---CCS------------------------------------CHHHHHHH
T ss_pred Eeccc--------------cccC-----CC---CCC------------------------------------CCHHHHHH
Confidence 54211 1110 00 000 00011233
Q ss_pred HHHHhhhccccEEEecCCCC-CCC--CCHHHHHHHHhcCCCCEEEecCCChHhHHHhhc---CCEEEEeceEeecC
Q psy9039 178 TAKAASFFLSDGLIITGNAT-GDP--ADVSQLMSVKNAVDLPILIGSGVTSDNVEHYMT---ADALIIGSHFKQGG 247 (251)
Q Consensus 178 ~a~~a~~~~~D~v~VTG~~~-g~~--~~~~~l~~vr~~~~~PV~vG~GI~~~~v~~~~~---ADGvIVGS~~~~~g 247 (251)
+++..+..|+|++-+++... ... ...+.++++|+.+++||++.|||+++++.+++. ||+|.+|+.|..|-
T Consensus 260 la~~le~~Gvd~i~v~~~~~~~~~~~~~~~~~~~ik~~~~iPvi~~Ggi~~~~a~~~l~~g~aD~V~igR~~l~~P 335 (377)
T 2r14_A 260 LAGELDRRGLAYLHFNEPDWIGGDITYPEGFREQMRQRFKGGLIYCGNYDAGRAQARLDDNTADAVAFGRPFIANP 335 (377)
T ss_dssp HHHHHHHTTCSEEEEECCC------CCCTTHHHHHHHHCCSEEEEESSCCHHHHHHHHHTTSCSEEEESHHHHHCT
T ss_pred HHHHHHHcCCCEEEEeCCcccCCCCcchHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCceEEeecHHHHhCc
Confidence 44444556888888876321 111 145678899999999999999999999999984 99999999987764
No 95
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=97.93 E-value=1.6e-05 Score=72.90 Aligned_cols=69 Identities=17% Similarity=0.104 Sum_probs=53.7
Q ss_pred HHHHHHhhhccccEEEecCCCCCCCCCHHHHHHHHhcCCCCEEEecCCChHhHHHhhc---CCEEEEeceEeecCe
Q psy9039 176 TETAKAASFFLSDGLIITGNATGDPADVSQLMSVKNAVDLPILIGSGVTSDNVEHYMT---ADALIIGSHFKQGGR 248 (251)
Q Consensus 176 ~~~a~~a~~~~~D~v~VTG~~~g~~~~~~~l~~vr~~~~~PV~vG~GI~~~~v~~~~~---ADGvIVGS~~~~~g~ 248 (251)
.++++..+..|+|++-+++...+. +.++++|+.+++||++.||++++++.+++. ||+|.+|..|+.|-.
T Consensus 245 ~~la~~l~~~Gvd~i~v~~~~~~~----~~~~~ik~~~~iPvi~~Ggit~e~a~~~l~~g~aD~V~iGR~~lanPd 316 (362)
T 4ab4_A 245 TYVARELGKRGIAFICSREREADD----SIGPLIKEAFGGPYIVNERFDKASANAALASGKADAVAFGVPFIANPD 316 (362)
T ss_dssp HHHHHHHHHTTCSEEEEECCCCTT----CCHHHHHHHHCSCEEEESSCCHHHHHHHHHTTSCSEEEESHHHHHCTT
T ss_pred HHHHHHHHHhCCCEEEECCCCCCH----HHHHHHHHHCCCCEEEeCCCCHHHHHHHHHcCCccEEEECHHhHhCcH
Confidence 334455555689999888765322 357788888899999999999999999884 999999999877643
No 96
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=97.92 E-value=1.5e-05 Score=73.09 Aligned_cols=155 Identities=16% Similarity=0.157 Sum_probs=96.7
Q ss_pred hHHHHHHHHHhhCCCCcCCCCccEEEEeecCC-------CCccccCCCch----H-HHHHHHHHHHHHHHhCCCCccEEE
Q psy9039 30 NMTRLCAEIRKVLPPSVPVGVQHGVIVENMHD-------VPYVLEAESGP----E-ITANMTRLCAEIRKVLPPSVPVGV 97 (251)
Q Consensus 30 ~~~~i~~~a~~~a~~l~~~Gv~D~i~ieN~~~-------~Pf~~p~~~gp----~-i~aa~~~~i~~vr~~~~~~~P~Gv 97 (251)
.++.+++.-.+.|+...++|+ |+|+|-=-.| -|.+....|.+ + ...-+.++++++|+.++.. |+++
T Consensus 155 eI~~ii~~f~~AA~~A~~aGf-DgVEih~a~GYLl~QFLsp~~N~RtD~yGGslenR~rf~~evv~aVr~~vg~~-~v~v 232 (361)
T 3gka_A 155 EIPGVVAAFRRGAENARAAGF-DGVEVHGANGYLLDQFLQDSANRRTDAYGGSIENRARLLLEVVDAAIDVWSAA-RVGV 232 (361)
T ss_dssp GHHHHHHHHHHHHHHHHHTTC-SEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHSHHHHHHHHHHHHHHCGG-GEEE
T ss_pred HHHHHHHHHHHHHHHHHHcCC-CEEEECCcCccHHHhccCcccccccCCCCCChhhcHHHHHHHHHHHHHHcCCC-eEEE
Confidence 578888888888888899999 9999821111 25544322311 1 1122335677777776533 6665
Q ss_pred EEeeCChHHHHHHHHHcCccceecccccccccCCCceeecCcchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHH
Q psy9039 98 QILSGCNKAALATAQAAGLDFIRAESFVFGHMADEGLMNAQAGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITE 177 (251)
Q Consensus 98 n~~~N~~~~~~~ia~a~g~~Fir~~~~~~~~~~~~Gli~~da~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~ 177 (251)
=+-.+ ++.. |.-..+ +.....+
T Consensus 233 Rls~~--------------~~~~------------g~~~~~--------------------------------~~~~~~~ 254 (361)
T 3gka_A 233 HLAPR--------------GDAH------------TMGDSD--------------------------------PAATFGH 254 (361)
T ss_dssp EECTT--------------CCSS------------SCCCSC--------------------------------HHHHHHH
T ss_pred ecccc--------------cccC------------CCCCCC--------------------------------cHHHHHH
Confidence 43111 1100 000000 0012233
Q ss_pred HHHHhhhccccEEEecCCCCCCCCCHHHHHHHHhcCCCCEEEecCCChHhHHHhhc---CCEEEEeceEeecCe
Q psy9039 178 TAKAASFFLSDGLIITGNATGDPADVSQLMSVKNAVDLPILIGSGVTSDNVEHYMT---ADALIIGSHFKQGGR 248 (251)
Q Consensus 178 ~a~~a~~~~~D~v~VTG~~~g~~~~~~~l~~vr~~~~~PV~vG~GI~~~~v~~~~~---ADGvIVGS~~~~~g~ 248 (251)
+++..+..|+|++-+++...+. +.++++|+.+++||++.||++++++.+++. ||+|.+|..|..|-.
T Consensus 255 la~~l~~~Gvd~i~v~~~~~~~----~~~~~ik~~~~iPvi~~Ggit~e~a~~~l~~G~aD~V~iGR~~ladPd 324 (361)
T 3gka_A 255 VARELGRRRIAFLFARESFGGD----AIGQQLKAAFGGPFIVNENFTLDSAQAALDAGQADAVAWGKLFIANPD 324 (361)
T ss_dssp HHHHHHHTTCSEEEEECCCSTT----CCHHHHHHHHCSCEEEESSCCHHHHHHHHHTTSCSEEEESHHHHHCTT
T ss_pred HHHHHHHcCCCEEEECCCCCCH----HHHHHHHHHcCCCEEEeCCCCHHHHHHHHHcCCccEEEECHHhHhCcH
Confidence 4455555689999888765322 357788888899999999999999999884 999999999877643
No 97
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=97.90 E-value=7.1e-05 Score=68.35 Aligned_cols=70 Identities=21% Similarity=0.333 Sum_probs=55.5
Q ss_pred HHHHHHhhhccccEEEecCCC----CCCCCCHHHHHHHHhcC--CCCEEEecCC-ChHhHHHhhc--CCEEEEeceEee
Q psy9039 176 TETAKAASFFLSDGLIITGNA----TGDPADVSQLMSVKNAV--DLPILIGSGV-TSDNVEHYMT--ADALIIGSHFKQ 245 (251)
Q Consensus 176 ~~~a~~a~~~~~D~v~VTG~~----~g~~~~~~~l~~vr~~~--~~PV~vG~GI-~~~~v~~~~~--ADGvIVGS~~~~ 245 (251)
.+.|+.+...|+|+++|+|.. .+.++..+.+.++++.+ ++||++-||| +++++.+++. ||+|.+|+.|..
T Consensus 228 ~e~A~~a~~~GaD~I~vsn~GG~~~d~~~~~~~~L~~i~~av~~~ipVia~GGI~~g~Dv~kaLalGA~aV~iGr~~l~ 306 (352)
T 3sgz_A 228 KEDAELAMKHNVQGIVVSNHGGRQLDEVSASIDALREVVAAVKGKIEVYMDGGVRTGTDVLKALALGARCIFLGRPILW 306 (352)
T ss_dssp HHHHHHHHHTTCSEEEECCGGGTSSCSSCCHHHHHHHHHHHHTTSSEEEEESSCCSHHHHHHHHHTTCSEEEESHHHHH
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCccCCCccHHHHHHHHHHHhCCCCeEEEECCCCCHHHHHHHHHcCCCEEEECHHHHH
Confidence 455677777899999997741 12234568888888776 7999999999 7899888886 999999998863
No 98
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=97.88 E-value=1.5e-05 Score=72.97 Aligned_cols=46 Identities=15% Similarity=0.229 Sum_probs=40.4
Q ss_pred HHHHHHHHhcC-CCCEEEecCC-ChHhHHHhhc--CCEEEEeceEeecCe
Q psy9039 203 VSQLMSVKNAV-DLPILIGSGV-TSDNVEHYMT--ADALIIGSHFKQGGR 248 (251)
Q Consensus 203 ~~~l~~vr~~~-~~PV~vG~GI-~~~~v~~~~~--ADGvIVGS~~~~~g~ 248 (251)
++.+.++++.. ++||+..||| |++++.+++. ||+|.|||++..+|-
T Consensus 265 ~~~i~~v~~~~~~ipII~~GGI~s~~da~~~l~aGAd~V~vgra~l~~GP 314 (354)
T 4ef8_A 265 LANINAFYRRCPGKLIFGCGGVYTGEDAFLHVLAGASMVQVGTALQEEGP 314 (354)
T ss_dssp HHHHHHHHHHCTTSEEEEESCCCSHHHHHHHHHHTEEEEEECHHHHHHCT
T ss_pred HHHHHHHHHhCCCCCEEEECCcCCHHHHHHHHHcCCCEEEEhHHHHHhCH
Confidence 56788999886 7999999999 7999998886 999999999988764
No 99
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=97.85 E-value=4.4e-05 Score=67.71 Aligned_cols=161 Identities=12% Similarity=0.170 Sum_probs=88.6
Q ss_pred CCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEe-------eCCh-----HHHHHH
Q psy9039 43 PPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQIL-------SGCN-----KAALAT 110 (251)
Q Consensus 43 ~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~-------~N~~-----~~~~~i 110 (251)
.+.+++|+ |-|++..-+..+=..| + .-.++++|+..+ +|+-+|+= ||+. ......
T Consensus 53 ~~A~~gGA-dRIELc~~l~~GGlTP---S-------~g~i~~a~~~~~--ipV~vMIRPRgGdF~Ys~~E~~~M~~dI~~ 119 (287)
T 3iwp_A 53 VNAERGGA-DRIELCSGLSEGGTTP---S-------MGVLQVVKQSVQ--IPVFVMIRPRGGDFLYSDREIEVMKADIRL 119 (287)
T ss_dssp HHHHHHTC-SEEEECBCGGGTCBCC---C-------HHHHHHHHTTCC--SCEEEECCSSSSCSCCCHHHHHHHHHHHHH
T ss_pred HHHHHhCC-CEEEECCCCCCCCCCC---C-------HHHHHHHHHhcC--CCeEEEEecCCCCcccCHHHHHHHHHHHHH
Confidence 55688999 9999874433322333 2 234556677666 78777752 1110 012444
Q ss_pred HHHcCccceecccccccccCCCceeecC-cchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccE
Q psy9039 111 AQAAGLDFIRAESFVFGHMADEGLMNAQ-AGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDG 189 (251)
Q Consensus 111 a~a~g~~Fir~~~~~~~~~~~~Gli~~d-a~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~ 189 (251)
+...|++.+-. ..+..+|-+..+ ..++++....++. - | +.. ... .. ...+..+....+|+|.
T Consensus 120 ~~~~GAdGvVf-----G~L~~dg~iD~~~~~~Li~~a~~l~v---T-F---HRA--FD~-~~--d~~~Ale~Li~lGvdr 182 (287)
T 3iwp_A 120 AKLYGADGLVF-----GALTEDGHIDKELCMSLMAICRPLPV---T-F---HRA--FDM-VH--DPMAALETLLTLGFER 182 (287)
T ss_dssp HHHTTCSEEEE-----CCBCTTSCBCHHHHHHHHHHHTTSCE---E-E---CGG--GGG-CS--CHHHHHHHHHHHTCSE
T ss_pred HHHcCCCEEEE-----eeeCCCCCcCHHHHHHHHHHcCCCcE---E-E---ECc--hhc-cC--CHHHHHHHHHHcCCCE
Confidence 55555554442 223344433221 2223332222211 0 0 100 010 11 1222223334469999
Q ss_pred EEecCCCCCCCCCHHHHHHHHhcC--CCCEEEecCCChHhHHHhhc
Q psy9039 190 LIITGNATGDPADVSQLMSVKNAV--DLPILIGSGVTSDNVEHYMT 233 (251)
Q Consensus 190 v~VTG~~~g~~~~~~~l~~vr~~~--~~PV~vG~GI~~~~v~~~~~ 233 (251)
+..||........++.|+++.+.. +++|++||||+++|+.++++
T Consensus 183 ILTSG~~~~a~~Gl~~Lk~Lv~~a~~rI~ImaGGGV~~~Ni~~l~~ 228 (287)
T 3iwp_A 183 VLTSGCDSSALEGLPLIKRLIEQAKGRIVVMPGGGITDRNLQRILE 228 (287)
T ss_dssp EEECTTSSSTTTTHHHHHHHHHHHTTSSEEEECTTCCTTTHHHHHH
T ss_pred EECCCCCCChHHhHHHHHHHHHHhCCCCEEEECCCcCHHHHHHHHH
Confidence 999998766656678888877654 59999999999999998874
No 100
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.84 E-value=8.6e-05 Score=72.69 Aligned_cols=157 Identities=13% Similarity=0.103 Sum_probs=95.4
Q ss_pred hHHHHHHHHHhhCCCCcCCCCccEEEEeecCCC-------CccccCCC---ch--HHHHHHHHHHHHHHHhCCCCccEEE
Q psy9039 30 NMTRLCAEIRKVLPPSVPVGVQHGVIVENMHDV-------PYVLEAES---GP--EITANMTRLCAEIRKVLPPSVPVGV 97 (251)
Q Consensus 30 ~~~~i~~~a~~~a~~l~~~Gv~D~i~ieN~~~~-------Pf~~p~~~---gp--~i~aa~~~~i~~vr~~~~~~~P~Gv 97 (251)
.++.+++.-.+.|+...++|+ |+|+|---.|. |++....| |. -...-+.++++++|+.+++.+|+++
T Consensus 135 ei~~~i~~~~~aA~~a~~aGf-d~veih~~~gyl~~qFlsp~~n~r~d~yGgs~~~r~r~~~eiv~avr~~vG~~~~v~v 213 (671)
T 1ps9_A 135 EILQLIDNFARCAQLAREAGY-DGVEVMGSEGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERVGNDFIIIY 213 (671)
T ss_dssp HHHHHHHHHHHHHHHHHHTTC-SEEEEEECBTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCSSSEEEE
T ss_pred HHHHHHHHHHHHHHHHHHcCC-CEEEEccccchHHHHhCCCccCCCcCcCCCcHHHHHHHHHHHHHHHHHHcCCCceEEE
Confidence 466777777788888889999 99997322222 55433222 11 1223345677888887643356665
Q ss_pred EEeeCChHHHHHHHHHcCccceecccccccccCCCceeecCcchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHH
Q psy9039 98 QILSGCNKAALATAQAAGLDFIRAESFVFGHMADEGLMNAQAGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITE 177 (251)
Q Consensus 98 n~~~N~~~~~~~ia~a~g~~Fir~~~~~~~~~~~~Gli~~da~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~ 177 (251)
=+-.+ +|.. .| . +.....+
T Consensus 214 rls~~--------------~~~~-----------~g-----------------~-------------------~~~~~~~ 232 (671)
T 1ps9_A 214 RLSML--------------DLVE-----------DG-----------------G-------------------TFAETVE 232 (671)
T ss_dssp EEEEE--------------CCST-----------TC-----------------C-------------------CHHHHHH
T ss_pred EECcc--------------ccCC-----------CC-----------------C-------------------CHHHHHH
Confidence 44221 1111 00 0 0011223
Q ss_pred HHHHhhhccccEEEecCCCC-----------CCCCCHHHHHHHHhcCCCCEEEecCC-ChHhHHHhhc---CCEEEEece
Q psy9039 178 TAKAASFFLSDGLIITGNAT-----------GDPADVSQLMSVKNAVDLPILIGSGV-TSDNVEHYMT---ADALIIGSH 242 (251)
Q Consensus 178 ~a~~a~~~~~D~v~VTG~~~-----------g~~~~~~~l~~vr~~~~~PV~vG~GI-~~~~v~~~~~---ADGvIVGS~ 242 (251)
+++..+.+|+|++.+++... +.....+.++++|+.+++||++.||| +++++.+++. ||+|.+|+.
T Consensus 233 ~a~~l~~~g~d~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~iPvi~~Ggi~~~~~a~~~l~~g~aD~V~~gR~ 312 (671)
T 1ps9_A 233 LAQAIEAAGATIINTGIGWHEARIPTIATPVPRGAFSWVTRKLKGHVSLPLVTTNRINDPQVADDILSRGDADMVSMARP 312 (671)
T ss_dssp HHHHHHHHTCSEEEEEECBTTCSSCSSSTTSCTTTTHHHHHHHTTSCSSCEEECSSCCSHHHHHHHHHTTSCSEEEESTH
T ss_pred HHHHHHhcCCCEEEcCCCccccccccccccCCcchHHHHHHHHHHhcCceEEEeCCCCCHHHHHHHHHcCCCCEEEeCHH
Confidence 33444445777776653110 00112577889999999999999999 7999999984 999999999
Q ss_pred EeecCe
Q psy9039 243 FKQGGR 248 (251)
Q Consensus 243 ~~~~g~ 248 (251)
|..|-.
T Consensus 313 ~l~~P~ 318 (671)
T 1ps9_A 313 FLADAE 318 (671)
T ss_dssp HHHCTT
T ss_pred HHhCcH
Confidence 987643
No 101
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=97.83 E-value=0.00015 Score=63.27 Aligned_cols=163 Identities=12% Similarity=0.136 Sum_probs=107.4
Q ss_pred CcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeCChHHHHHHHHHcCccceecccc
Q psy9039 45 SVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQILSGCNKAALATAQAAGLDFIRAESF 124 (251)
Q Consensus 45 l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~~~~~~ia~a~g~~Fir~~~~ 124 (251)
+.++|+ ++|-|-++- +|-.. ...-++++|+.++ +|+---=|.-+ .+++.-|.+.|++-+=.-+
T Consensus 72 ~~~~GA-~aiSVLTd~--~~F~G----------s~~~L~~vr~~v~--lPvLrKDFiid-~yQI~eAr~~GADaILLI~- 134 (258)
T 4a29_A 72 FMERYA-VGLSITTEE--KYFNG----------SYETLRKIASSVS--IPILMSDFIVK-ESQIDDAYNLGADTVLLIV- 134 (258)
T ss_dssp HHTTTC-SEEEEECCS--TTTCC----------CHHHHHHHHTTCS--SCEEEESCCCS-HHHHHHHHHHTCSEEEEEG-
T ss_pred HHhCCC-eEEEEeCCC--CCCCC----------CHHHHHHHHHhcC--CCEeecccccc-HHHHHHHHHcCCCeeehHH-
Confidence 456899 998874433 44443 2344678888888 79644333334 5778888888888765310
Q ss_pred cccccCCCceeecCcchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCCCC-CCCCH
Q psy9039 125 VFGHMADEGLMNAQAGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNATG-DPADV 203 (251)
Q Consensus 125 ~~~~~~~~Gli~~da~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~g-~~~~~ 203 (251)
+.++ .....++..+.+.+|.+-+-. | | .++..+.|...+++.++|....-. ...++
T Consensus 135 --a~L~-----~~~l~~l~~~A~~lGl~~LvE---V------h-------~~~El~rAl~~~a~iIGINNRnL~tf~vdl 191 (258)
T 4a29_A 135 --KILT-----ERELESLLEYARSYGMEPLIL---I------N-------DENDLDIALRIGARFIGIMSRDFETGEINK 191 (258)
T ss_dssp --GGSC-----HHHHHHHHHHHHHTTCCCEEE---E------S-------SHHHHHHHHHTTCSEEEECSBCTTTCCBCH
T ss_pred --hhcC-----HHHHHHHHHHHHHHhHHHHHh---c------c-------hHHHHHHHhcCCCcEEEEeCCCccccccCH
Confidence 1111 112567888888888732221 1 1 133345555568999999765322 34567
Q ss_pred HHHHHHHhcC--CCCEEEecCC-ChHhHHHhhc--CCEEEEeceEeecC
Q psy9039 204 SQLMSVKNAV--DLPILIGSGV-TSDNVEHYMT--ADALIIGSHFKQGG 247 (251)
Q Consensus 204 ~~l~~vr~~~--~~PV~vG~GI-~~~~v~~~~~--ADGvIVGS~~~~~g 247 (251)
+...++.+.. +..++.-+|| |++++..+.. +||+.||++|++..
T Consensus 192 ~~t~~L~~~ip~~~~~VsESGI~t~~dv~~l~~~G~~a~LVGealmr~~ 240 (258)
T 4a29_A 192 ENQRKLISMIPSNVVKVAKLGISERNEIEELRKLGVNAFLISSSLMRNP 240 (258)
T ss_dssp HHHHHHHTTSCTTSEEEEEESSCCHHHHHHHHHTTCCEEEECHHHHHCT
T ss_pred HHHHHHHhhCCCCCEEEEcCCCCCHHHHHHHHHCCCCEEEECHHHhCCC
Confidence 7777777765 6888999999 7999999986 99999999999854
No 102
>4aaj_A N-(5'-phosphoribosyl)anthranilate isomerase; alpha/beta-barrel, hyperthermophilic, phosphoribo isomerase; 1.75A {Pyrococcus furiosus}
Probab=97.82 E-value=4.8e-05 Score=65.49 Aligned_cols=132 Identities=17% Similarity=0.281 Sum_probs=77.0
Q ss_pred cEEEEEeeCChHHHHHHHHHcCccceecccccccccCCCceeecCcchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcc
Q psy9039 94 PVGVQILSGCNKAALATAQAAGLDFIRAESFVFGHMADEGLMNAQAGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADV 173 (251)
Q Consensus 94 P~Gvn~~~N~~~~~~~ia~a~g~~Fir~~~~~~~~~~~~Gli~~da~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~ 173 (251)
++.+-++.|. .+........+.++++.. | + .+.+.+..++++++..-++.+ . ++. ..+.
T Consensus 72 ~~~v~v~v~~-~ei~~~i~~~~ld~vQLH---G----~-----E~~~~~~~l~~~~~~~viKa~---~----v~~-~~~~ 130 (228)
T 4aaj_A 72 VFLVSTMVGF-SEWAMAIERTGAQYIQVH---S----N-----ALPQTIDTLKKEFGVFVMKAF---R----VPT-ISKN 130 (228)
T ss_dssp EEEEECCCCH-HHHHHHHHHHTCSEEEEC---S----C-----CCHHHHHHHHHHHCCEEEEEE---E----CCS-SCSC
T ss_pred CEEEeccCch-HHHHHHHHhccchheecc---c----c-----cCHHHHHHHhhccCceEEEEE---E----ecc-cccc
Confidence 5667777774 344445556677888864 2 1 123445566777765444443 1 111 1111
Q ss_pred ---cHHHHHHHhhhccccEEEe-cCCCCCCCCCHHHHHHHHhcCCCCEEEecCCChHhHHHhhc---CCEEEEeceEeec
Q psy9039 174 ---DITETAKAASFFLSDGLII-TGNATGDPADVSQLMSVKNAVDLPILIGSGVTSDNVEHYMT---ADALIIGSHFKQG 246 (251)
Q Consensus 174 ---~i~~~a~~a~~~~~D~v~V-TG~~~g~~~~~~~l~~vr~~~~~PV~vG~GI~~~~v~~~~~---ADGvIVGS~~~~~ 246 (251)
...........+.+|++.. |+..+|..-+++.++.+.. +.|++++||+||+|++++++ ..|+=|-|.+..+
T Consensus 131 ~~~~~~~~~~~~~~~~~d~~LlDs~GGtG~~fDW~~~~~~~~--~~p~iLAGGL~peNV~~Ai~~~~P~gVDVsSGVEs~ 208 (228)
T 4aaj_A 131 PEEDANRLLSEISRYNADMVLLDTGAGSGKLHDLRVSSLVAR--KIPVIVAGGLNAENVEEVIKVVKPYGVDVSSGVEKY 208 (228)
T ss_dssp HHHHHHHHHHHHHHSCCSEEEEEC-------CCCHHHHHHHH--HSCEEEESSCCTTTHHHHHHHHCCSEEEESGGGEET
T ss_pred hhhhHHHHHHHHhccCCCEEccCCCCCCcCcCChHHHHHhhh--cCCeEEECCCCHHHHHHHHHHhCCCEEEeCCCCCCC
Confidence 1111222222356787655 4445565567787776654 47999999999999999874 8999999999877
Q ss_pred Ce
Q psy9039 247 GR 248 (251)
Q Consensus 247 g~ 248 (251)
|+
T Consensus 209 G~ 210 (228)
T 4aaj_A 209 GI 210 (228)
T ss_dssp TE
T ss_pred CC
Confidence 75
No 103
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=97.80 E-value=1.3e-05 Score=70.16 Aligned_cols=177 Identities=16% Similarity=0.140 Sum_probs=104.7
Q ss_pred CCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeCChHHHHHHHHHcCccceecc
Q psy9039 43 PPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQILSGCNKAALATAQAAGLDFIRAE 122 (251)
Q Consensus 43 ~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~~~~~~ia~a~g~~Fir~~ 122 (251)
+.+.+.|+ |.+.+.+..+ .....++++.+.++ .|+-+-.=... . ...-.. .|++-+-.
T Consensus 45 ~~~~~~Ga-~~l~vvDL~~---------------~n~~~i~~i~~~~~--~pv~vgGGir~-~-~~~~~l-~Ga~~Vii- 102 (260)
T 2agk_A 45 KLYKDRDV-QGCHVIKLGP---------------NNDDAAREALQESP--QFLQVGGGIND-T-NCLEWL-KWASKVIV- 102 (260)
T ss_dssp HHHHHTTC-TTCEEEEESS---------------SCHHHHHHHHHHST--TTSEEESSCCT-T-THHHHT-TTCSCEEE-
T ss_pred HHHHHcCC-CEEEEEeCCC---------------CCHHHHHHHHhcCC--ceEEEeCCCCH-H-HHHHHh-cCCCEEEE-
Confidence 55678899 9888755553 14456777777777 67665432222 2 222222 55554443
Q ss_pred cccccccCCC-ceeecCcchhHHHHHhcCCCcchhhhhhH---h-----h-ccCCCCCCcccHH-HHHHHhhhccccEEE
Q psy9039 123 SFVFGHMADE-GLMNAQAGPLLRYRKQIGADNVLVFTDIK---K-----K-HSSHAITADVDIT-ETAKAASFFLSDGLI 191 (251)
Q Consensus 123 ~~~~~~~~~~-Gli~~da~e~~~~r~~l~~~~i~i~a~v~---~-----k-~~~~~~~~~~~i~-~~a~~a~~~~~D~v~ 191 (251)
|..+-.+ |-+. .+.+.+..++++...+-+--|+. . + +|..- .+..... +.++..+.+ ++.++
T Consensus 103 ---gs~a~~~~g~~~--p~~~~~~~~~~g~~~ivv~iD~k~~~~~g~~V~~~gw~~-~t~~~~~~e~a~~~~~~-a~~il 175 (260)
T 2agk_A 103 ---TSWLFTKEGHFQ--LKRLERLTELCGKDRIVVDLSCRKTQDGRWIVAMNKWQT-LTDLELNADTFRELRKY-TNEFL 175 (260)
T ss_dssp ---CGGGBCTTCCBC--HHHHHHHHHHHCGGGEEEEEEEEEEETTEEEEEETTTTE-EEEEEESHHHHHHHTTT-CSEEE
T ss_pred ---CcHHHhhcCCCC--HHHHHHHHHHhCcCcEEEEEEeeecCCCceEEEEcCCcc-ccCccHHHHHHHHHHHh-cCEEE
Confidence 2222122 3332 34455666666633322211221 0 0 11110 0111223 677777767 99999
Q ss_pred ecCCCC-C--CCCCHHHHHHHHhcC----CCCEEEecCC-ChHhHHHhhc----CCEEEEeceE-eecCe
Q psy9039 192 ITGNAT-G--DPADVSQLMSVKNAV----DLPILIGSGV-TSDNVEHYMT----ADALIIGSHF-KQGGR 248 (251)
Q Consensus 192 VTG~~~-g--~~~~~~~l~~vr~~~----~~PV~vG~GI-~~~~v~~~~~----ADGvIVGS~~-~~~g~ 248 (251)
+|+... | ..+++++++++++.+ ++||+++||| +++++.++++ +||+++||+| ..+|.
T Consensus 176 ~t~i~~dG~~~G~d~eli~~l~~~~~~~~~iPVIasGGi~s~ed~~~l~~~~~G~~gvivg~al~l~~g~ 245 (260)
T 2agk_A 176 IHAADVEGLCGGIDELLVSKLFEWTKDYDDLKIVYAGGAKSVDDLKLVDELSHGKVDLTFGSSLDIFGGN 245 (260)
T ss_dssp EEC-------CCCCHHHHHHHHHHHTTCSSCEEEEESCCCCTHHHHHHHHHHTTCEEEECCTTBGGGTCS
T ss_pred EEeeccccCcCCCCHHHHHHHHHhhcccCCceEEEeCCCCCHHHHHHHHHhcCCCCEEEeeCCHHHcCCC
Confidence 998543 2 235789999999999 9999999999 7899998873 7999999998 66666
No 104
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=97.80 E-value=7.4e-05 Score=69.39 Aligned_cols=158 Identities=13% Similarity=0.135 Sum_probs=96.4
Q ss_pred hHHHHHHHHHhhCCCCcCCCCccEEEEeecCC-------CCccccCCC---ch--HHHHHHHHHHHHHHHhCCCCccEEE
Q psy9039 30 NMTRLCAEIRKVLPPSVPVGVQHGVIVENMHD-------VPYVLEAES---GP--EITANMTRLCAEIRKVLPPSVPVGV 97 (251)
Q Consensus 30 ~~~~i~~~a~~~a~~l~~~Gv~D~i~ieN~~~-------~Pf~~p~~~---gp--~i~aa~~~~i~~vr~~~~~~~P~Gv 97 (251)
.++.+++.-.+.|+.+.++|+ |+|+|-=-.| -|++....| |. -...-+.++++++|+.+++. |+++
T Consensus 165 eI~~ii~~f~~AA~~a~~AGf-DgVEIh~ahGYLl~QFLsp~~N~RtD~yGGslenR~rf~~Eiv~aVr~avg~~-~V~v 242 (402)
T 2hsa_B 165 EISQVVEDYRRSALNAIEAGF-DGIEIHGAHGYLIDQFLKDGINDRTDEYGGSLANRCKFITQVVQAVVSAIGAD-RVGV 242 (402)
T ss_dssp GHHHHHHHHHHHHHHHHHTTC-SEEEEECCTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGG-GEEE
T ss_pred HHHHHHHHHHHHHHHHHHcCC-CEEEECCccchHHHhccCCccCccCCccCcChhhhhHHHHHHHHHHHHHhCCC-cEEE
Confidence 578888888888888889999 9999721111 276443222 22 12233446788888877533 6666
Q ss_pred EEeeCChHHHHHHHHHcCccceecccccccccCCCceeecCcchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHH
Q psy9039 98 QILSGCNKAALATAQAAGLDFIRAESFVFGHMADEGLMNAQAGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITE 177 (251)
Q Consensus 98 n~~~N~~~~~~~ia~a~g~~Fir~~~~~~~~~~~~Gli~~da~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~ 177 (251)
=+-.+ ++.. |+-..+ +.....+
T Consensus 243 Rls~~--------------~~~~------------g~~~~~--------------------------------~~~~~~~ 264 (402)
T 2hsa_B 243 RVSPA--------------IDHL------------DAMDSN--------------------------------PLSLGLA 264 (402)
T ss_dssp EECSS--------------CCST------------TCCCSC--------------------------------HHHHHHH
T ss_pred Eeccc--------------cccC------------CCCCCC--------------------------------CHHHHHH
Confidence 43211 1100 000000 0011223
Q ss_pred HHHHhhhcc------ccEEEecCCCCCC---CC---------CHHHHHHHHhcCCCCEEEecCCChHhHHHhhc---CCE
Q psy9039 178 TAKAASFFL------SDGLIITGNATGD---PA---------DVSQLMSVKNAVDLPILIGSGVTSDNVEHYMT---ADA 236 (251)
Q Consensus 178 ~a~~a~~~~------~D~v~VTG~~~g~---~~---------~~~~l~~vr~~~~~PV~vG~GI~~~~v~~~~~---ADG 236 (251)
+++..+..| +|++-+++..... .+ ..+.++++|+.+++||++.|||+++.+.+++. ||+
T Consensus 265 la~~le~~G~~gg~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vk~~~~iPvi~~G~i~~~~a~~~l~~g~aD~ 344 (402)
T 2hsa_B 265 VVERLNKIQLHSGSKLAYLHVTQPRYVAYGQTEAGRLGSEEEEARLMRTLRNAYQGTFICSGGYTRELGIEAVAQGDADL 344 (402)
T ss_dssp HHHHHHHHHHHHTSCCSEEEEECCCCCTTTTSSSTTTTHHHHHHHHHHHHHHHCSSCEEEESSCCHHHHHHHHHTTSCSE
T ss_pred HHHHHHhcCCccCCceEEEEEecCccccccCCccccccCCcchHHHHHHHHHHCCCCEEEeCCCCHHHHHHHHHCCCCce
Confidence 334444346 8888887643211 11 23567789999999999999999999999884 999
Q ss_pred EEEeceEeecC
Q psy9039 237 LIIGSHFKQGG 247 (251)
Q Consensus 237 vIVGS~~~~~g 247 (251)
|.+|..|..|-
T Consensus 345 V~igR~~l~dP 355 (402)
T 2hsa_B 345 VSYGRLFISNP 355 (402)
T ss_dssp EEESHHHHHCT
T ss_pred eeecHHHHhCc
Confidence 99999987764
No 105
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.77 E-value=7.7e-05 Score=76.67 Aligned_cols=157 Identities=20% Similarity=0.276 Sum_probs=91.2
Q ss_pred HHHHHHHHHHhCCCCccEEEEEeeC-Ch---HHHHHHHHHcCccceecccccccccCCC--c-eeecCc---chhHH-HH
Q psy9039 78 MTRLCAEIRKVLPPSVPVGVQILSG-CN---KAALATAQAAGLDFIRAESFVFGHMADE--G-LMNAQA---GPLLR-YR 146 (251)
Q Consensus 78 ~~~~i~~vr~~~~~~~P~Gvn~~~N-~~---~~~~~ia~a~g~~Fir~~~~~~~~~~~~--G-li~~da---~e~~~-~r 146 (251)
+.+-++++++..++ .|+++|++.. +. ......+...|++++..+.-+-...... | .+..+. .++++ .+
T Consensus 621 ~~~~i~~~~~~~~~-~~~i~~i~~g~~~~~~~~~a~~~~~~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~ 699 (1025)
T 1gte_A 621 WCQSVTELKADFPD-NIVIASIMCSYNKNDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVR 699 (1025)
T ss_dssp HHHHHHHHHHHCTT-SEEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCC-CCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEEECCCCCCCCCCCcccccccCHHHHHHHHHHHH
Confidence 34445677776644 4999998643 21 1223333446788888864332211111 1 111121 12222 22
Q ss_pred HhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCC-----------------------CCCC---C
Q psy9039 147 KQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGN-----------------------ATGD---P 200 (251)
Q Consensus 147 ~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~-----------------------~~g~---~ 200 (251)
+.. .+.++. |.. + .-..+.++++.+...|+|++.+|++ ..+. +
T Consensus 700 ~~~---~~Pv~v----K~~-~---~~~~~~~~a~~~~~~G~d~i~v~Nt~~~~~~~~~~~~~~~~~~~~gr~~~gg~sg~ 768 (1025)
T 1gte_A 700 QAV---QIPFFA----KLT-P---NVTDIVSIARAAKEGGADGVTATNTVSGLMGLKADGTPWPAVGAGKRTTYGGVSGT 768 (1025)
T ss_dssp HHC---SSCEEE----EEC-S---CSSCHHHHHHHHHHHTCSEEEECCCEEECCCBCTTSCBSSCBTTTTBBCCEEEESG
T ss_pred Hhh---CCceEE----EeC-C---ChHHHHHHHHHHHHcCCCEEEEeccccccccccccccccccccccccccCCCCCcc
Confidence 222 122221 211 1 1124677788887789999999531 1111 1
Q ss_pred CC----HHHHHHHHhcC-CCCEEEecCC-ChHhHHHhhc--CCEEEEeceEeec
Q psy9039 201 AD----VSQLMSVKNAV-DLPILIGSGV-TSDNVEHYMT--ADALIIGSHFKQG 246 (251)
Q Consensus 201 ~~----~~~l~~vr~~~-~~PV~vG~GI-~~~~v~~~~~--ADGvIVGS~~~~~ 246 (251)
.. ++.+.++++.+ ++||+..||| |++++.+++. ||+|.||++|...
T Consensus 769 ~~~~~~~~~v~~v~~~~~~ipvi~~GGI~s~~da~~~l~~Ga~~v~vg~~~l~~ 822 (1025)
T 1gte_A 769 AIRPIALRAVTTIARALPGFPILATGGIDSAESGLQFLHSGASVLQVCSAVQNQ 822 (1025)
T ss_dssp GGHHHHHHHHHHHHHHSTTCCEEEESSCCSHHHHHHHHHTTCSEEEESHHHHTS
T ss_pred cchhHHHHHHHHHHHHcCCCCEEEecCcCCHHHHHHHHHcCCCEEEEeeccccC
Confidence 11 35788899888 8999999999 7999999885 9999999998863
No 106
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=97.75 E-value=5.1e-05 Score=65.73 Aligned_cols=71 Identities=15% Similarity=0.167 Sum_probs=57.3
Q ss_pred cHHHHHHHhhhccccEEEecCCCC---CCCCCHHHHHHHHhcCCCCEEEecCC-ChHhHHHhhc--CCEEEEeceEe
Q psy9039 174 DITETAKAASFFLSDGLIITGNAT---GDPADVSQLMSVKNAVDLPILIGSGV-TSDNVEHYMT--ADALIIGSHFK 244 (251)
Q Consensus 174 ~i~~~a~~a~~~~~D~v~VTG~~~---g~~~~~~~l~~vr~~~~~PV~vG~GI-~~~~v~~~~~--ADGvIVGS~~~ 244 (251)
+..+.++.....|+|.+.+|.... +.....+.++++++.+++|+++++|| +.+++.+++. ||++++||.+.
T Consensus 31 ~~~~~a~~~~~~Ga~~i~v~d~~~~~~~~g~~~~~i~~i~~~~~iPvi~~ggi~~~~~i~~~~~~Gad~v~lg~~~~ 107 (266)
T 2w6r_A 31 LLRDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLAGADKALAASVFH 107 (266)
T ss_dssp EHHHHHHHHHHHTCSEEEEEETTTSSCSSCCCHHHHHHHGGGCCSCEEEESCCCSTHHHHHHHHHTCSEEECCCCC-
T ss_pred CHHHHHHHHHHCCCCEEEEEecCcccCCCcccHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCCcHhhhhHHHH
Confidence 456667776668999999987432 23345789999999999999999999 5799998886 99999999987
No 107
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=97.75 E-value=0.00011 Score=66.85 Aligned_cols=44 Identities=18% Similarity=0.291 Sum_probs=38.2
Q ss_pred HHHHHHHHhcC--CCCEEEecCC-ChHhHHHhhc--CCEEEEeceEeec
Q psy9039 203 VSQLMSVKNAV--DLPILIGSGV-TSDNVEHYMT--ADALIIGSHFKQG 246 (251)
Q Consensus 203 ~~~l~~vr~~~--~~PV~vG~GI-~~~~v~~~~~--ADGvIVGS~~~~~ 246 (251)
++.+.++++.+ ++||+..||| |++++.+++. ||+|.|||+|...
T Consensus 262 ~~~v~~i~~~~~~~ipIIg~GGI~s~~da~~~l~aGAd~V~igra~~~~ 310 (345)
T 3oix_A 262 LANVHAFYKRLNPSIQIIGTGGVXTGRDAFEHILCGASMVQIGTALHQE 310 (345)
T ss_dssp HHHHHHHHTTSCTTSEEEEESSCCSHHHHHHHHHHTCSEEEESHHHHHH
T ss_pred HHHHHHHHHHcCCCCcEEEECCCCChHHHHHHHHhCCCEEEEChHHHhc
Confidence 46788999998 7999999999 7999998886 9999999995443
No 108
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=97.75 E-value=2.7e-05 Score=70.63 Aligned_cols=71 Identities=13% Similarity=0.149 Sum_probs=53.8
Q ss_pred HHHHHHhhhccccEEEecCC-----------CC---------CCCCCHHHHHHHHhcC-CCCEEEecCC-ChHhHHHhhc
Q psy9039 176 TETAKAASFFLSDGLIITGN-----------AT---------GDPADVSQLMSVKNAV-DLPILIGSGV-TSDNVEHYMT 233 (251)
Q Consensus 176 ~~~a~~a~~~~~D~v~VTG~-----------~~---------g~~~~~~~l~~vr~~~-~~PV~vG~GI-~~~~v~~~~~ 233 (251)
.+.++.+...|+|++.++|. +. +..+..+.|.++++.. ++||++.||| |++++.+++.
T Consensus 192 ~~~a~~a~~~Gad~I~v~~~ggt~~~~~e~~r~~~~~~~~~~~g~~~~~~l~~v~~~~~~ipvia~GGI~~~~d~~k~l~ 271 (349)
T 1p0k_A 192 KASAGKLYEAGAAAVDIGGYGGTNFSKIENLRRQRQISFFNSWGISTAASLAEIRSEFPASTMIASGGLQDALDVAKAIA 271 (349)
T ss_dssp HHHHHHHHHHTCSEEEEEC---------------CCGGGGTTCSCCHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEcCCCCcchhhHHHhhcccchhhhhccCccHHHHHHHHHHhcCCCeEEEECCCCCHHHHHHHHH
Confidence 34566666679999999653 21 1223456788888876 8999999999 7999999875
Q ss_pred --CCEEEEeceEeec
Q psy9039 234 --ADALIIGSHFKQG 246 (251)
Q Consensus 234 --ADGvIVGS~~~~~ 246 (251)
||+|.|||+|...
T Consensus 272 ~GAd~V~iG~~~l~~ 286 (349)
T 1p0k_A 272 LGASCTGMAGHFLKA 286 (349)
T ss_dssp TTCSEEEECHHHHHH
T ss_pred cCCCEEEEcHHHHHH
Confidence 9999999998753
No 109
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=97.74 E-value=1.5e-05 Score=72.53 Aligned_cols=157 Identities=13% Similarity=0.189 Sum_probs=97.4
Q ss_pred CCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeCCh-HHHHHHHHHcCccceec
Q psy9039 43 PPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQILSGCN-KAALATAQAAGLDFIRA 121 (251)
Q Consensus 43 ~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~-~~~~~ia~a~g~~Fir~ 121 (251)
+.|.+.|+ |.||+-.-.|.||++|.+ ||.... -...++++++..++ .|+.++++.|.+ ..-+.-|...|.+.+++
T Consensus 37 ~~L~~~Gv-d~IEvG~~~g~p~ssp~~-g~~~~~-~~e~l~~i~~~~~~-~~i~~l~~p~~~~~~~i~~a~~aGvd~v~I 112 (345)
T 1nvm_A 37 RALDKAKV-DSIEVAHGDGLQGSSFNY-GFGRHT-DLEYIEAVAGEISH-AQIATLLLPGIGSVHDLKNAYQAGARVVRV 112 (345)
T ss_dssp HHHHHHTC-SEEECSCTTSTTCCBTTT-BCCSSC-HHHHHHHHHTTCSS-SEEEEEECBTTBCHHHHHHHHHHTCCEEEE
T ss_pred HHHHHcCC-CEEEEecCCCCCCCCCcc-cCCCCC-HHHHHHHHHhhCCC-CEEEEEecCCcccHHHHHHHHhCCcCEEEE
Confidence 67888999 999752222499999875 663332 23456777776554 588888655321 33455566678888776
Q ss_pred ccccccccCCCceeecCcchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCCCCCC-
Q psy9039 122 ESFVFGHMADEGLMNAQAGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNATGDP- 200 (251)
Q Consensus 122 ~~~~~~~~~~~Gli~~da~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~g~~- 200 (251)
.. .+.+ .....+..++.++.|..-...+.+ . + .++.+++.++++.+..+|++.+.+.++. |..
T Consensus 113 ~~----~~s~----~~~~~~~i~~ak~~G~~v~~~~~~-a-----~-~~~~e~~~~ia~~~~~~Ga~~i~l~DT~-G~~~ 176 (345)
T 1nvm_A 113 AT----HCTE----ADVSKQHIEYARNLGMDTVGFLMM-S-----H-MIPAEKLAEQGKLMESYGATCIYMADSG-GAMS 176 (345)
T ss_dssp EE----ETTC----GGGGHHHHHHHHHHTCEEEEEEES-T-----T-SSCHHHHHHHHHHHHHHTCSEEEEECTT-CCCC
T ss_pred EE----eccH----HHHHHHHHHHHHHCCCEEEEEEEe-C-----C-CCCHHHHHHHHHHHHHCCCCEEEECCCc-CccC
Confidence 31 1111 123567777888887633322221 1 1 1455678888887776789988876652 332
Q ss_pred C-CH-HHHHHHHhcC--CCCEEE
Q psy9039 201 A-DV-SQLMSVKNAV--DLPILI 219 (251)
Q Consensus 201 ~-~~-~~l~~vr~~~--~~PV~v 219 (251)
+ .. ++++++|+.+ ++|+.+
T Consensus 177 P~~v~~lv~~l~~~~~~~~pi~~ 199 (345)
T 1nvm_A 177 MNDIRDRMRAFKAVLKPETQVGM 199 (345)
T ss_dssp HHHHHHHHHHHHHHSCTTSEEEE
T ss_pred HHHHHHHHHHHHHhcCCCceEEE
Confidence 2 23 6788999988 788877
No 110
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=97.73 E-value=4.2e-05 Score=72.07 Aligned_cols=165 Identities=13% Similarity=0.090 Sum_probs=106.5
Q ss_pred CCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeCChHHHHHHHHHcCccceecc
Q psy9039 43 PPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQILSGCNKAALATAQAAGLDFIRAE 122 (251)
Q Consensus 43 ~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~~~~~~ia~a~g~~Fir~~ 122 (251)
++++++ + .+|-+-.+ -+|-.. ...-++++|+.++ .|+---=|.-+ .++..-+.+.|++-+-..
T Consensus 75 ~~y~~~-A-~~IsvLTd--~~~F~g----------s~~dL~~vr~~v~--lPvLrKDFI~d-~~Qi~ea~~~GAD~ILLi 137 (452)
T 1pii_A 75 AIYKHY-A-SAISVLTD--EKYFQG----------SFNFLPIVSQIAP--QPILCKDFIID-PYQIYLARYYQADACLLM 137 (452)
T ss_dssp HHHTTT-C-SEEEEECC--STTTCC----------CTTHHHHHHHHCC--SCEEEESCCCS-HHHHHHHHHTTCSEEEEE
T ss_pred HHHHhh-C-cEEEEEec--ccccCC----------CHHHHHHHHHhcC--CCeEEEeccCC-HHHHHHHHHcCCCEEEEE
Confidence 445566 7 88776332 233332 1234567888888 79854444444 456666888898887753
Q ss_pred cccccccCCCceeecCcchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCCC-CCCC
Q psy9039 123 SFVFGHMADEGLMNAQAGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNAT-GDPA 201 (251)
Q Consensus 123 ~~~~~~~~~~Gli~~da~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~-g~~~ 201 (251)
+ +.+. ..+..++.++.+.+|. ..+.++ ...+.++.|...|+|.++++-..- ....
T Consensus 138 ~---a~l~-----~~~l~~l~~~a~~lgm---~~LvEv-------------h~~eE~~~A~~lga~iIGinnr~L~t~~~ 193 (452)
T 1pii_A 138 L---SVLD-----DDQYRQLAAVAHSLEM---GVLTEV-------------SNEEEQERAIALGAKVVGINNRDLRDLSI 193 (452)
T ss_dssp T---TTCC-----HHHHHHHHHHHHHTTC---EEEEEE-------------CSHHHHHHHHHTTCSEEEEESEETTTTEE
T ss_pred c---ccCC-----HHHHHHHHHHHHHcCC---eEEEEe-------------CCHHHHHHHHHCCCCEEEEeCCCCCCCCC
Confidence 1 1111 1235667777778775 222222 223445566666999999987532 2344
Q ss_pred CHHHHHHHHhcC--CCCEEEecCC-ChHhHHHhhc-CCEEEEeceEeecCe
Q psy9039 202 DVSQLMSVKNAV--DLPILIGSGV-TSDNVEHYMT-ADALIIGSHFKQGGR 248 (251)
Q Consensus 202 ~~~~l~~vr~~~--~~PV~vG~GI-~~~~v~~~~~-ADGvIVGS~~~~~g~ 248 (251)
+++...++.+.. +++++..||| |++++..+.. |||+.|||+|++..+
T Consensus 194 dl~~~~~L~~~ip~~~~vIaEsGI~t~edv~~~~~~a~avLVGealmr~~d 244 (452)
T 1pii_A 194 DLNRTRELAPKLGHNVTVISESGINTYAQVRELSHFANGFLIGSALMAHDD 244 (452)
T ss_dssp CTHHHHHHHHHHCTTSEEEEESCCCCHHHHHHHTTTCSEEEECHHHHTCSC
T ss_pred CHHHHHHHHHhCCCCCeEEEECCCCCHHHHHHHHHhCCEEEEcHHHcCCcC
Confidence 666666666554 6899999999 7999999998 999999999988643
No 111
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=97.72 E-value=6.4e-05 Score=69.54 Aligned_cols=69 Identities=22% Similarity=0.296 Sum_probs=50.4
Q ss_pred HHHHHHhhhccccEEEecCCCCC----------C-CCCHHHHHHHHh---cCCCCEEEecCC-ChHhHHHhhc--CCEEE
Q psy9039 176 TETAKAASFFLSDGLIITGNATG----------D-PADVSQLMSVKN---AVDLPILIGSGV-TSDNVEHYMT--ADALI 238 (251)
Q Consensus 176 ~~~a~~a~~~~~D~v~VTG~~~g----------~-~~~~~~l~~vr~---~~~~PV~vG~GI-~~~~v~~~~~--ADGvI 238 (251)
.+.++.+...|+|++.|++ ..| . .+..+.+..+++ ..++||++.||| +++++.+++. ||+|.
T Consensus 205 ~~~a~~a~~~Gad~I~vg~-~~G~~~~~~~~~~~g~p~~~~l~~v~~~~~~~~ipVia~GGI~~~~d~~~ala~GAd~V~ 283 (404)
T 1eep_A 205 KEAALDLISVGADCLKVGI-GPGSICTTRIVAGVGVPQITAICDVYEACNNTNICIIADGGIRFSGDVVKAIAAGADSVM 283 (404)
T ss_dssp HHHHHHHHTTTCSEEEECS-SCSTTSHHHHHHCCCCCHHHHHHHHHHHHTTSSCEEEEESCCCSHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHhcCCCEEEECC-CCCcCcCccccCCCCcchHHHHHHHHHHHhhcCceEEEECCCCCHHHHHHHHHcCCCHHh
Confidence 4556777778999999942 111 1 223444555554 568999999999 6999999996 99999
Q ss_pred EeceEee
Q psy9039 239 IGSHFKQ 245 (251)
Q Consensus 239 VGS~~~~ 245 (251)
+||.|..
T Consensus 284 iG~~~l~ 290 (404)
T 1eep_A 284 IGNLFAG 290 (404)
T ss_dssp ECHHHHT
T ss_pred hCHHHhc
Confidence 9999853
No 112
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=97.67 E-value=0.0001 Score=67.84 Aligned_cols=158 Identities=11% Similarity=0.136 Sum_probs=96.9
Q ss_pred hHHHHHHHHHhhCCCCcCCCCccEEEEeecCCC-------CccccCCC---ch--HHHHHHHHHHHHHHHhCCCCccEEE
Q psy9039 30 NMTRLCAEIRKVLPPSVPVGVQHGVIVENMHDV-------PYVLEAES---GP--EITANMTRLCAEIRKVLPPSVPVGV 97 (251)
Q Consensus 30 ~~~~i~~~a~~~a~~l~~~Gv~D~i~ieN~~~~-------Pf~~p~~~---gp--~i~aa~~~~i~~vr~~~~~~~P~Gv 97 (251)
.++.+++.-.+.|+.+.++|+ |+|+|-=-.|. |.+....| |. -...-..++++++|+.++.. |+++
T Consensus 161 eI~~~i~~f~~AA~~a~~aGf-DgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~-~V~v 238 (376)
T 1icp_A 161 EIPQIVNEFRVAARNAIEAGF-DGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRCRFALEIVEAVANEIGSD-RVGI 238 (376)
T ss_dssp THHHHHHHHHHHHHHHHHTTC-SEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGG-GEEE
T ss_pred HHHHHHHHHHHHHHHHHHcCC-CEEEEcCccchhhhhccCCcccCCCCccCccHHHhHHHHHHHHHHHHHHhcCC-ceEE
Confidence 577777887888888889999 99997322222 66443222 21 12223445778888877633 6666
Q ss_pred EEeeCChHHHHHHHHHcCccceecccccccccCCCceeecCcchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHH
Q psy9039 98 QILSGCNKAALATAQAAGLDFIRAESFVFGHMADEGLMNAQAGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITE 177 (251)
Q Consensus 98 n~~~N~~~~~~~ia~a~g~~Fir~~~~~~~~~~~~Gli~~da~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~ 177 (251)
=+-.+ ++.. |+- +. .+.....+
T Consensus 239 rls~~--------------~~~~------------g~~--------------~~------------------~~~~~~~~ 260 (376)
T 1icp_A 239 RISPF--------------AHYN------------EAG--------------DT------------------NPTALGLY 260 (376)
T ss_dssp EECTT--------------CCTT------------TCC--------------CS------------------CHHHHHHH
T ss_pred Eeccc--------------cccC------------CCC--------------CC------------------CCHHHHHH
Confidence 54211 1100 000 00 00012234
Q ss_pred HHHHhhhccccEEEecCCCCCC--C--CCHHHHHHHHhcCCCCEEEecCCChHhHHHhhc---CCEEEEeceEeecC
Q psy9039 178 TAKAASFFLSDGLIITGNATGD--P--ADVSQLMSVKNAVDLPILIGSGVTSDNVEHYMT---ADALIIGSHFKQGG 247 (251)
Q Consensus 178 ~a~~a~~~~~D~v~VTG~~~g~--~--~~~~~l~~vr~~~~~PV~vG~GI~~~~v~~~~~---ADGvIVGS~~~~~g 247 (251)
+++..+.+|+|.+-+++..... + ...+.++++|+.+++||++++||+++.+.+++. ||+|.+|..|..|-
T Consensus 261 la~~le~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~vr~~~~iPvi~~G~i~~~~a~~~l~~g~aD~V~~gR~~l~~P 337 (376)
T 1icp_A 261 MVESLNKYDLAYCHVVEPRMKTAWEKIECTESLVPMRKAYKGTFIVAGGYDREDGNRALIEDRADLVAYGRLFISNP 337 (376)
T ss_dssp HHHHHGGGCCSEEEEECCSCCC------CCCCSHHHHHHCCSCEEEESSCCHHHHHHHHHTTSCSEEEESHHHHHCT
T ss_pred HHHHHHHcCCCEEEEcCCcccCCCCccccHHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHCCCCcEEeecHHHHhCc
Confidence 4555555688888887542110 1 123456788999999999999999999999884 99999999987764
No 113
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=97.67 E-value=0.00031 Score=64.63 Aligned_cols=68 Identities=25% Similarity=0.371 Sum_probs=50.4
Q ss_pred HHHHHhhhccccEEEecCC--CC-----C-CCCCHHHHHHHHhc-------CC---CCEEEecCC-ChHhHHHhhc--CC
Q psy9039 177 ETAKAASFFLSDGLIITGN--AT-----G-DPADVSQLMSVKNA-------VD---LPILIGSGV-TSDNVEHYMT--AD 235 (251)
Q Consensus 177 ~~a~~a~~~~~D~v~VTG~--~~-----g-~~~~~~~l~~vr~~-------~~---~PV~vG~GI-~~~~v~~~~~--AD 235 (251)
+.++.+...|+|++.| |. ++ + ..+..+.+.++++. ++ +||++.||| +++++.+++. ||
T Consensus 223 e~a~~~~~~Gad~i~v-g~Gg~~~~~~~~~g~~~~~~l~~v~~~~~~~~~~~~~~~ipvia~GGI~~~~dv~kalalGA~ 301 (393)
T 2qr6_A 223 TTALHMMRTGAVGIIV-GGGENTNSLALGMEVSMATAIADVAAARRDYLDETGGRYVHIIADGSIENSGDVVKAIACGAD 301 (393)
T ss_dssp HHHHHHHTTTCSEEEE-SCCSCCHHHHTSCCCCHHHHHHHHHHHHHHHHHHHTSCCCEEEECSSCCSHHHHHHHHHHTCS
T ss_pred HHHHHHHHcCCCEEEE-CCCcccccccCCCCCChHHHHHHHHHHHHHhHhhcCCcceEEEEECCCCCHHHHHHHHHcCCC
Confidence 3456666679999999 43 21 1 13445667666665 43 999999999 7999999886 99
Q ss_pred EEEEeceEee
Q psy9039 236 ALIIGSHFKQ 245 (251)
Q Consensus 236 GvIVGS~~~~ 245 (251)
+|.+||.|..
T Consensus 302 ~V~iG~~~l~ 311 (393)
T 2qr6_A 302 AVVLGSPLAR 311 (393)
T ss_dssp EEEECGGGGG
T ss_pred EEEECHHHHc
Confidence 9999999743
No 114
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=97.66 E-value=4.4e-05 Score=72.70 Aligned_cols=71 Identities=14% Similarity=0.246 Sum_probs=51.5
Q ss_pred HHHHHHHhhhccccEEEecCCCCCC----------CCCHHHHHHHHhc---CCCCEEEecCC-ChHhHHHhhc--CCEEE
Q psy9039 175 ITETAKAASFFLSDGLIITGNATGD----------PADVSQLMSVKNA---VDLPILIGSGV-TSDNVEHYMT--ADALI 238 (251)
Q Consensus 175 i~~~a~~a~~~~~D~v~VTG~~~g~----------~~~~~~l~~vr~~---~~~PV~vG~GI-~~~~v~~~~~--ADGvI 238 (251)
..+.++.+...|+|++.|.+...+. .+..+.+.++.+. .++||++.||| +++++.+++. ||+|+
T Consensus 282 t~e~a~~l~~aGaD~I~Vg~g~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~~iPVIa~GGI~~~~di~kala~GAd~V~ 361 (496)
T 4fxs_A 282 TAEGARALIEAGVSAVKVGIGPGSICTTRIVTGVGVPQITAIADAAGVANEYGIPVIADGGIRFSGDISKAIAAGASCVM 361 (496)
T ss_dssp SHHHHHHHHHHTCSEEEECSSCCTTBCHHHHHCCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHTTCSEEE
T ss_pred cHHHHHHHHHhCCCEEEECCCCCcCcccccccCCCccHHHHHHHHHHHhccCCCeEEEeCCCCCHHHHHHHHHcCCCeEE
Confidence 3455666666799999986321111 2345666666653 47999999999 7999998886 99999
Q ss_pred EeceEee
Q psy9039 239 IGSHFKQ 245 (251)
Q Consensus 239 VGS~~~~ 245 (251)
+||+|..
T Consensus 362 iGs~f~~ 368 (496)
T 4fxs_A 362 VGSMFAG 368 (496)
T ss_dssp ESTTTTT
T ss_pred ecHHHhc
Confidence 9998853
No 115
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=97.63 E-value=4.2e-05 Score=72.70 Aligned_cols=70 Identities=24% Similarity=0.356 Sum_probs=51.5
Q ss_pred HHHHHHhhhccccEEEecCCC---------CCC-CCCHHHHHHHHhc---CCCCEEEecCC-ChHhHHHhhc--CCEEEE
Q psy9039 176 TETAKAASFFLSDGLIITGNA---------TGD-PADVSQLMSVKNA---VDLPILIGSGV-TSDNVEHYMT--ADALII 239 (251)
Q Consensus 176 ~~~a~~a~~~~~D~v~VTG~~---------~g~-~~~~~~l~~vr~~---~~~PV~vG~GI-~~~~v~~~~~--ADGvIV 239 (251)
.+.++.+...|+|++.|.+.. ++. .+..+.+.++++. .++||++.||| +++++.+++. ||+|.+
T Consensus 281 ~e~a~~l~~aGaD~I~vg~g~Gs~~~t~~~~g~g~p~~~~l~~v~~~~~~~~iPVIa~GGI~~~~di~kal~~GAd~V~v 360 (490)
T 4avf_A 281 AEAAKALAEAGADAVKVGIGPGSICTTRIVAGVGVPQISAIANVAAALEGTGVPLIADGGIRFSGDLAKAMVAGAYCVMM 360 (490)
T ss_dssp HHHHHHHHHTTCSEEEECSSCSTTCHHHHHTCBCCCHHHHHHHHHHHHTTTTCCEEEESCCCSHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHcCCCEEEECCCCCcCCCccccCCCCccHHHHHHHHHHHhccCCCcEEEeCCCCCHHHHHHHHHcCCCeeee
Confidence 455677777899999983211 111 2345667777664 37999999999 7999999886 999999
Q ss_pred eceEee
Q psy9039 240 GSHFKQ 245 (251)
Q Consensus 240 GS~~~~ 245 (251)
||+|..
T Consensus 361 Gs~~~~ 366 (490)
T 4avf_A 361 GSMFAG 366 (490)
T ss_dssp CTTTTT
T ss_pred cHHHhc
Confidence 999754
No 116
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=97.63 E-value=0.0001 Score=61.84 Aligned_cols=137 Identities=15% Similarity=0.158 Sum_probs=86.8
Q ss_pred HHHHHHHHHHhCCCCccEEE----EEeeCChHHHHHHHHHcCccceecccccccccCCCceeecCcchhHHHHHhcCCCc
Q psy9039 78 MTRLCAEIRKVLPPSVPVGV----QILSGCNKAALATAQAAGLDFIRAESFVFGHMADEGLMNAQAGPLLRYRKQIGADN 153 (251)
Q Consensus 78 ~~~~i~~vr~~~~~~~P~Gv----n~~~N~~~~~~~ia~a~g~~Fir~~~~~~~~~~~~Gli~~da~e~~~~r~~l~~~~ 153 (251)
+..+++++|+... .++.- ..+.++ ..++ +|+.. ...++|+|... ....++.+++|...
T Consensus 43 l~~~v~~lk~~~K--~v~Vh~Dli~Gls~d---~~ai------~fL~~------~~~pdGIIsTk-~~~i~~Ak~~gL~t 104 (192)
T 3kts_A 43 LKALVKYAQAGGK--KVLLHADLVNGLKND---DYAI------DFLCT------EICPDGIISTR-GNAIMKAKQHKMLA 104 (192)
T ss_dssp HHHHHHHHHHTTC--EEEEEGGGEETCCCS---HHHH------HHHHH------TTCCSEEEESC-HHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHcCC--eEEEecCchhccCCc---HHHH------HHHHh------CCCCCEEEeCc-HHHHHHHHHCCCeE
Confidence 6778889998755 34431 111111 2333 56552 35688888776 45567777888754
Q ss_pred chhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCCCCCCCCHHHHHHHHhcCCCCEEEecCC-ChHhHHHhh
Q psy9039 154 VLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNATGDPADVSQLMSVKNAVDLPILIGSGV-TSDNVEHYM 232 (251)
Q Consensus 154 i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~g~~~~~~~l~~vr~~~~~PV~vG~GI-~~~~v~~~~ 232 (251)
|+=+. ..+...++...+..+...+|++-+- .|. -.+.++++++.+++||++||+| +.+++.+++
T Consensus 105 IqR~F----------liDS~al~~~~~~i~~~~PD~iEiL---PGi--~p~iI~~i~~~~~~PiIaGGlI~~~edv~~al 169 (192)
T 3kts_A 105 IQRLF----------MIDSSAYNKGVALIQKVQPDCIELL---PGI--IPEQVQKMTQKLHIPVIAGGLIETSEQVNQVI 169 (192)
T ss_dssp EEEEE----------CCSHHHHHHHHHHHHHHCCSEEEEE---CTT--CHHHHHHHHHHHCCCEEEESSCCSHHHHHHHH
T ss_pred EEEEE----------EEEcchHHHHHHHHhhcCCCEEEEC---Cch--hHHHHHHHHHhcCCCEEEECCcCCHHHHHHHH
Confidence 43321 1222333333344444467887443 122 2478999999999999999999 689999999
Q ss_pred c--CCEEEEeceEeecC
Q psy9039 233 T--ADALIIGSHFKQGG 247 (251)
Q Consensus 233 ~--ADGvIVGS~~~~~g 247 (251)
+ ||++..|+.-.=+|
T Consensus 170 ~aGA~aVsTs~~~LW~~ 186 (192)
T 3kts_A 170 ASGAIAVTTSNKHLWEG 186 (192)
T ss_dssp TTTEEEEEECCGGGGTT
T ss_pred HcCCeEEEeCCHHHhCc
Confidence 6 99999998765444
No 117
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=97.62 E-value=7.8e-05 Score=67.44 Aligned_cols=69 Identities=23% Similarity=0.310 Sum_probs=54.9
Q ss_pred HHHHHHhhhccccEEEecCCC---------CCC-CC--CHHHHHHHHhcCCCCEEEecCC-ChHhHHHhhc--CCEEEEe
Q psy9039 176 TETAKAASFFLSDGLIITGNA---------TGD-PA--DVSQLMSVKNAVDLPILIGSGV-TSDNVEHYMT--ADALIIG 240 (251)
Q Consensus 176 ~~~a~~a~~~~~D~v~VTG~~---------~g~-~~--~~~~l~~vr~~~~~PV~vG~GI-~~~~v~~~~~--ADGvIVG 240 (251)
.+.|+.+...|+|++++++.. .+. .+ ..+.+.++++.+++||++.||| +++++.+++. ||+|.+|
T Consensus 160 ~e~A~~a~~aGad~Ivvs~hgG~~~~~~~~~~~g~~g~~~~~l~~v~~~~~ipVIa~GGI~~g~Dv~kalalGAdaV~iG 239 (336)
T 1ypf_A 160 PEAVRELENAGADATKVGIGPGKVCITKIKTGFGTGGWQLAALRWCAKAASKPIIADGGIRTNGDVAKSIRFGATMVMIG 239 (336)
T ss_dssp HHHHHHHHHHTCSEEEECSSCSTTCHHHHHHSCSSTTCHHHHHHHHHHTCSSCEEEESCCCSTHHHHHHHHTTCSEEEES
T ss_pred HHHHHHHHHcCCCEEEEecCCCceeecccccCcCCchhHHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHcCCCEEEeC
Confidence 456777777899999995431 011 12 3677889999889999999999 7899998886 9999999
Q ss_pred ceEe
Q psy9039 241 SHFK 244 (251)
Q Consensus 241 S~~~ 244 (251)
+.|.
T Consensus 240 r~~l 243 (336)
T 1ypf_A 240 SLFA 243 (336)
T ss_dssp GGGT
T ss_pred hhhh
Confidence 9998
No 118
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=97.61 E-value=5.8e-05 Score=69.30 Aligned_cols=70 Identities=23% Similarity=0.367 Sum_probs=55.6
Q ss_pred HHHHHHhhhccccEEEecCC--CC--CCCCCHHHHHHHHhcC--CCCEEEecCC-ChHhHHHhhc--CCEEEEeceEee
Q psy9039 176 TETAKAASFFLSDGLIITGN--AT--GDPADVSQLMSVKNAV--DLPILIGSGV-TSDNVEHYMT--ADALIIGSHFKQ 245 (251)
Q Consensus 176 ~~~a~~a~~~~~D~v~VTG~--~~--g~~~~~~~l~~vr~~~--~~PV~vG~GI-~~~~v~~~~~--ADGvIVGS~~~~ 245 (251)
.+.++.+...|+|++.|+|. +. +..+.++.+.++++.+ ++||++.||| +++++.+++. ||+|.+|+.|..
T Consensus 240 ~e~a~~a~~~Gad~I~vs~~ggr~~~~g~~~~~~l~~v~~~v~~~ipVia~GGI~~g~D~~kalalGAd~V~iGr~~l~ 318 (368)
T 2nli_A 240 PEDADMAIKRGASGIWVSNHGARQLYEAPGSFDTLPAIAERVNKRVPIVFDSGVRRGEHVAKALASGADVVALGRPVLF 318 (368)
T ss_dssp HHHHHHHHHTTCSEEEECCGGGTSCSSCCCHHHHHHHHHHHHTTSSCEEECSSCCSHHHHHHHHHTTCSEEEECHHHHH
T ss_pred HHHHHHHHHcCCCEEEEcCCCcCCCCCCCChHHHHHHHHHHhCCCCeEEEECCCCCHHHHHHHHHcCCCEEEECHHHHH
Confidence 45567777789999999763 21 2234568888998877 6999999999 7999998886 999999998754
No 119
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=97.60 E-value=7.6e-05 Score=63.99 Aligned_cols=73 Identities=21% Similarity=0.263 Sum_probs=56.8
Q ss_pred cHHHHHHHhhhccccEEEecCCCCCCC---CCHHHHHHHHhcCCCCEEEecCC-ChHhHHHhhc--CCEEEEeceEeec
Q psy9039 174 DITETAKAASFFLSDGLIITGNATGDP---ADVSQLMSVKNAVDLPILIGSGV-TSDNVEHYMT--ADALIIGSHFKQG 246 (251)
Q Consensus 174 ~i~~~a~~a~~~~~D~v~VTG~~~g~~---~~~~~l~~vr~~~~~PV~vG~GI-~~~~v~~~~~--ADGvIVGS~~~~~ 246 (251)
...++++.....|+|.+.++....... ...+.++++++.+++||++++|| +++++.+++. ||++++|+.+..+
T Consensus 32 d~~~~a~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~~~~~iPvi~~Ggi~~~~~~~~~~~~Gad~V~lg~~~l~~ 110 (252)
T 1ka9_F 32 DPVEAARAYDEAGADELVFLDISATHEERAILLDVVARVAERVFIPLTVGGGVRSLEDARKLLLSGADKVSVNSAAVRR 110 (252)
T ss_dssp CHHHHHHHHHHHTCSCEEEEECCSSTTCHHHHHHHHHHHHTTCCSCEEEESSCCSHHHHHHHHHHTCSEEEECHHHHHC
T ss_pred CHHHHHHHHHHcCCCEEEEEcCCccccCccccHHHHHHHHHhCCCCEEEECCcCCHHHHHHHHHcCCCEEEEChHHHhC
Confidence 455666666667999998886543222 23467889999999999999999 5899999986 9999999987654
No 120
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=97.59 E-value=8.6e-05 Score=68.08 Aligned_cols=90 Identities=21% Similarity=0.265 Sum_probs=62.9
Q ss_pred hhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCC--C--CCCCCCHHHHHHHHhcC--CCCEEEecCC-ChHhH
Q psy9039 156 VFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGN--A--TGDPADVSQLMSVKNAV--DLPILIGSGV-TSDNV 228 (251)
Q Consensus 156 i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~--~--~g~~~~~~~l~~vr~~~--~~PV~vG~GI-~~~~v 228 (251)
.+..+....+.|+........+.++.+...|+|++.|++. + .+..+..+.+.++++.+ ++||++-||| +++++
T Consensus 216 ~i~~l~~~~~~pv~vK~~~~~e~a~~a~~~Gad~I~vs~~ggr~~~~~~~~~~~l~~v~~~~~~~ipvia~GGI~~~~D~ 295 (370)
T 1gox_A 216 DVAWLQTITSLPILVKGVITAEDARLAVQHGAAGIIVSNHGARQLDYVPATIMALEEVVKAAQGRIPVFLDGGVRRGTDV 295 (370)
T ss_dssp HHHHHHHHCCSCEEEECCCSHHHHHHHHHTTCSEEEECCGGGTSSTTCCCHHHHHHHHHHHTTTSSCEEEESSCCSHHHH
T ss_pred HHHHHHHHhCCCEEEEecCCHHHHHHHHHcCCCEEEECCCCCccCCCcccHHHHHHHHHHHhCCCCEEEEECCCCCHHHH
Confidence 3444444444554211122345567777789999999653 2 12234567888898877 7999999999 78999
Q ss_pred HHhhc--CCEEEEeceEee
Q psy9039 229 EHYMT--ADALIIGSHFKQ 245 (251)
Q Consensus 229 ~~~~~--ADGvIVGS~~~~ 245 (251)
.+++. ||+|.+|+.|..
T Consensus 296 ~k~l~~GAdaV~iGr~~l~ 314 (370)
T 1gox_A 296 FKALALGAAGVFIGRPVVF 314 (370)
T ss_dssp HHHHHHTCSEEEECHHHHH
T ss_pred HHHHHcCCCEEeecHHHHH
Confidence 99986 999999998864
No 121
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=97.58 E-value=0.00047 Score=63.46 Aligned_cols=71 Identities=10% Similarity=0.022 Sum_probs=53.6
Q ss_pred HHHHHHhhhccccEEEecCCCCCCC-CCHHHHHHHHhcCCCCEEEecCCChHhHHHhhc---CCEEEEeceEeecC
Q psy9039 176 TETAKAASFFLSDGLIITGNATGDP-ADVSQLMSVKNAVDLPILIGSGVTSDNVEHYMT---ADALIIGSHFKQGG 247 (251)
Q Consensus 176 ~~~a~~a~~~~~D~v~VTG~~~g~~-~~~~~l~~vr~~~~~PV~vG~GI~~~~v~~~~~---ADGvIVGS~~~~~g 247 (251)
.++++..+.+|+|.+-+++.....+ ...+ ++++|+.+++||++++||+++++.+++. ||+|.+|..|+.|-
T Consensus 269 ~~la~~l~~~Gvd~i~v~~~~~~~~~~~~~-~~~ir~~~~iPvi~~G~it~~~a~~~l~~g~aD~V~igR~~l~~P 343 (379)
T 3aty_A 269 KHLCKKIEPLSLAYLHYLRGDMVNQQIGDV-VAWVRGSYSGVKISNLRYDFEEADQQIREGKVDAVAFGAKFIANP 343 (379)
T ss_dssp HHHHHHHGGGCCSEEEEECSCTTSCCCCCH-HHHHHTTCCSCEEEESSCCHHHHHHHHHTTSCSEEEESHHHHHCT
T ss_pred HHHHHHHHHhCCCEEEEcCCCcCCCCccHH-HHHHHHHCCCcEEEECCCCHHHHHHHHHcCCCeEEEecHHHHhCc
Confidence 3445555556899998876421101 1126 8899999999999999999999999984 99999999988764
No 122
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=97.58 E-value=3.6e-05 Score=70.94 Aligned_cols=72 Identities=19% Similarity=0.253 Sum_probs=56.6
Q ss_pred cHHHHHHHhhhccccEEEecCC--CC--CCCCCHHHHHHHHhcCCCCEEEecCC-ChHhHHHhhc--CCEEEEeceEee
Q psy9039 174 DITETAKAASFFLSDGLIITGN--AT--GDPADVSQLMSVKNAVDLPILIGSGV-TSDNVEHYMT--ADALIIGSHFKQ 245 (251)
Q Consensus 174 ~i~~~a~~a~~~~~D~v~VTG~--~~--g~~~~~~~l~~vr~~~~~PV~vG~GI-~~~~v~~~~~--ADGvIVGS~~~~ 245 (251)
...+.++.+...|+|++.|+|. +. +..++++.+.++++.++.||++-||| +++++.+++. ||+|.+|+.|..
T Consensus 234 ~t~e~a~~a~~aGad~I~vs~~gg~~~d~~~~~~~~l~~v~~~~~~pVia~GGI~~~~dv~kal~~GAdaV~iGr~~l~ 312 (380)
T 1p4c_A 234 LSAEDADRCIAEGADGVILSNHGGRQLDCAISPMEVLAQSVAKTGKPVLIDSGFRRGSDIVKALALGAEAVLLGRATLY 312 (380)
T ss_dssp CCHHHHHHHHHTTCSEEEECCGGGTSCTTCCCGGGTHHHHHHHHCSCEEECSSCCSHHHHHHHHHTTCSCEEESHHHHH
T ss_pred CcHHHHHHHHHcCCCEEEEcCCCCCcCCCCcCHHHHHHHHHHHcCCeEEEECCCCCHHHHHHHHHhCCcHhhehHHHHH
Confidence 3355667777789999999653 21 23345678889998888899999999 7899999886 999999998753
No 123
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=97.54 E-value=5e-05 Score=72.58 Aligned_cols=68 Identities=18% Similarity=0.335 Sum_probs=49.4
Q ss_pred HHHHHHhhhccccEEEecCCCCCC-----------CCCHHHHHHHHh---cCCCCEEEecCC-ChHhHHHhhc--CCEEE
Q psy9039 176 TETAKAASFFLSDGLIITGNATGD-----------PADVSQLMSVKN---AVDLPILIGSGV-TSDNVEHYMT--ADALI 238 (251)
Q Consensus 176 ~~~a~~a~~~~~D~v~VTG~~~g~-----------~~~~~~l~~vr~---~~~~PV~vG~GI-~~~~v~~~~~--ADGvI 238 (251)
.+.++.+...|+|++.| |...|. .+....+.++++ ..++||++.||| +++++.+++. ||+|+
T Consensus 308 ~e~a~~~~~aGad~i~v-g~g~gsi~~~~~~~g~g~p~~~~l~~v~~~~~~~~iPVIa~GGI~~~~di~kala~GA~~V~ 386 (511)
T 3usb_A 308 AEATKALIEAGANVVKV-GIGPGSICTTRVVAGVGVPQLTAVYDCATEARKHGIPVIADGGIKYSGDMVKALAAGAHVVM 386 (511)
T ss_dssp HHHHHHHHHHTCSEEEE-CSSCSTTCCHHHHHCCCCCHHHHHHHHHHHHHTTTCCEEEESCCCSHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHhCCCEEEE-CCCCccccccccccCCCCCcHHHHHHHHHHHHhCCCcEEEeCCCCCHHHHHHHHHhCchhhe
Confidence 45566666679999988 332222 334555555543 347999999999 7999998886 99999
Q ss_pred EeceEe
Q psy9039 239 IGSHFK 244 (251)
Q Consensus 239 VGS~~~ 244 (251)
+||+|.
T Consensus 387 vGs~~~ 392 (511)
T 3usb_A 387 LGSMFA 392 (511)
T ss_dssp ESTTTT
T ss_pred ecHHHh
Confidence 999973
No 124
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A
Probab=97.52 E-value=0.00019 Score=59.56 Aligned_cols=73 Identities=18% Similarity=0.196 Sum_probs=54.1
Q ss_pred cHHHHHHHhhhccccEEEecCC-CCCCC--CCHHHHHHHHhcCCCCEEEecCC-ChHhHHHhhc--CCEEEEeceEeec
Q psy9039 174 DITETAKAASFFLSDGLIITGN-ATGDP--ADVSQLMSVKNAVDLPILIGSGV-TSDNVEHYMT--ADALIIGSHFKQG 246 (251)
Q Consensus 174 ~i~~~a~~a~~~~~D~v~VTG~-~~g~~--~~~~~l~~vr~~~~~PV~vG~GI-~~~~v~~~~~--ADGvIVGS~~~~~ 246 (251)
++.+..+.....++..+.+||. ++|.. ...+.++++++..++|+++.+|+ +++++.+.+. |||+++||+|..+
T Consensus 131 ~~~~~i~~~~~~~~~~vli~~~~~~g~~~g~~~~~i~~~~~~~~~Pvia~~g~~~~~~~~~~~~~G~~~~~vg~a~~~~ 209 (237)
T 3cwo_X 131 LLRDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLAGADAALAASVFHFR 209 (237)
T ss_dssp EHHHHHHHHHHHTCSEEEEEETTTTTCCSCCCHHHHHHHGGGCCSCEEEESCCCSHHHHHHHHHHTCSEEEESHHHHTT
T ss_pred CHHHHHHHHhhcCCCeEEEEecCCCCccccccHHHHHHHHHhcCCCEEecCCCCCHHHHHHHHHcCcHHHhhhHHHHcC
Confidence 4555555544456766667763 34432 23678999999999999999999 5899999886 9999999998543
No 125
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=97.50 E-value=0.00036 Score=62.89 Aligned_cols=44 Identities=27% Similarity=0.460 Sum_probs=39.0
Q ss_pred HHHHHHHhcCCCCE--EEecCC-ChHhHHHhhc--CCEEEEeceEeecC
Q psy9039 204 SQLMSVKNAVDLPI--LIGSGV-TSDNVEHYMT--ADALIIGSHFKQGG 247 (251)
Q Consensus 204 ~~l~~vr~~~~~PV--~vG~GI-~~~~v~~~~~--ADGvIVGS~~~~~g 247 (251)
++++++++..++|| +.-||| |++++.++++ |||+.|||+|.+.+
T Consensus 230 ell~~i~~~~~IPVV~VAeGGI~Tpeda~~~l~~GaDgV~VGsaI~~a~ 278 (330)
T 2yzr_A 230 EVLLEVKKLGRLPVVNFAAGGVATPADAALMMQLGSDGVFVGSGIFKSE 278 (330)
T ss_dssp HHHHHHHHHTSCSSEEEECSCCCSHHHHHHHHHTTCSCEEESHHHHTSS
T ss_pred HHHHHHHHhCCCCeEEEEECCCCCHHHHHHHHHcCcCEEeeHHHHhcCC
Confidence 78889999889999 589999 7999999996 99999999997544
No 126
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.50 E-value=0.00038 Score=68.91 Aligned_cols=46 Identities=15% Similarity=0.088 Sum_probs=40.3
Q ss_pred CHHHHHHHHhcCCCCEEEecCC-ChHhHHHhhc---CCEEEEeceEeecC
Q psy9039 202 DVSQLMSVKNAVDLPILIGSGV-TSDNVEHYMT---ADALIIGSHFKQGG 247 (251)
Q Consensus 202 ~~~~l~~vr~~~~~PV~vG~GI-~~~~v~~~~~---ADGvIVGS~~~~~g 247 (251)
..+.++++|+.+++||+..||| +++.+.+++. ||+|.+|..|+.|-
T Consensus 279 ~~~~~~~i~~~~~~pvi~~G~i~~~~~a~~~l~~g~aD~V~~gR~~l~~P 328 (729)
T 1o94_A 279 TIPWVKLVKQVSKKPVLGVGRYTDPEKMIEIVTKGYADIIGCARPSIADP 328 (729)
T ss_dssp THHHHHHHHTTCSSCEECCSCCCCHHHHHHHHHTTSCSBEEESHHHHHCT
T ss_pred cHHHHHHHHHHCCCEEEEeCCCCCHHHHHHHHHCCCCCEEEeCchhhcCc
Confidence 3577889999999999999999 6999999984 99999999887664
No 127
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=97.50 E-value=0.00016 Score=65.17 Aligned_cols=69 Identities=19% Similarity=0.279 Sum_probs=54.2
Q ss_pred HHHHHhhhccccEEEecCC-----------CC-----------CCCCCHHHHHHHHhcC-CCCEEEecCC-ChHhHHHhh
Q psy9039 177 ETAKAASFFLSDGLIITGN-----------AT-----------GDPADVSQLMSVKNAV-DLPILIGSGV-TSDNVEHYM 232 (251)
Q Consensus 177 ~~a~~a~~~~~D~v~VTG~-----------~~-----------g~~~~~~~l~~vr~~~-~~PV~vG~GI-~~~~v~~~~ 232 (251)
+.++.+...|+|++.|+|. +. +..+..+.+.++++.+ ++||++.||| +++++.+++
T Consensus 196 e~a~~~~~~G~d~I~vs~~ggt~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~v~~~~~~ipvia~GGI~~~~d~~kal 275 (332)
T 1vcf_A 196 EAALALRDLPLAAVDVAGAGGTSWARVEEWVRFGEVRHPELCEIGIPTARAILEVREVLPHLPLVASGGVYTGTDGAKAL 275 (332)
T ss_dssp HHHHHHTTSCCSEEECCCBTSCCHHHHHHTC--------CCTTCSCBHHHHHHHHHHHCSSSCEEEESSCCSHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEeCCCCCCcchhHHHhhccccchhhhHhhccccHHHHHHHHHHhcCCCeEEEECCCCCHHHHHHHH
Confidence 3466666789999999764 21 1123457788898888 8999999999 799999888
Q ss_pred c--CCEEEEeceEee
Q psy9039 233 T--ADALIIGSHFKQ 245 (251)
Q Consensus 233 ~--ADGvIVGS~~~~ 245 (251)
. ||+|.+|+.|..
T Consensus 276 ~~GAd~V~igr~~l~ 290 (332)
T 1vcf_A 276 ALGADLLAVARPLLR 290 (332)
T ss_dssp HHTCSEEEECGGGHH
T ss_pred HhCCChHhhhHHHHH
Confidence 6 999999999873
No 128
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=97.46 E-value=8.4e-05 Score=66.60 Aligned_cols=69 Identities=13% Similarity=0.189 Sum_probs=55.3
Q ss_pred HHHHHHhhhccccEEEecCCCCCC----CCCHHHHHHHHhcCCCCEEEecCC-ChHhHHHhhc---CCEEEEeceEeec
Q psy9039 176 TETAKAASFFLSDGLIITGNATGD----PADVSQLMSVKNAVDLPILIGSGV-TSDNVEHYMT---ADALIIGSHFKQG 246 (251)
Q Consensus 176 ~~~a~~a~~~~~D~v~VTG~~~g~----~~~~~~l~~vr~~~~~PV~vG~GI-~~~~v~~~~~---ADGvIVGS~~~~~ 246 (251)
.+.++.++..|+|++.|+|..... ..+.+.++++++ ++||++.||| |++++.+++. ||+|.+|+++..|
T Consensus 143 ~~~a~~l~~~G~d~i~v~g~~~~~~~~~~~~~~~i~~i~~--~ipVi~~GgI~s~~da~~~l~~~gad~V~iGR~~l~~ 219 (318)
T 1vhn_A 143 EEIYRILVEEGVDEVFIHTRTVVQSFTGRAEWKALSVLEK--RIPTFVSGDIFTPEDAKRALEESGCDGLLVARGAIGR 219 (318)
T ss_dssp HHHHHHHHHTTCCEEEEESSCTTTTTSSCCCGGGGGGSCC--SSCEEEESSCCSHHHHHHHHHHHCCSEEEESGGGTTC
T ss_pred HHHHHHHHHhCCCEEEEcCCCccccCCCCcCHHHHHHHHc--CCeEEEECCcCCHHHHHHHHHcCCCCEEEECHHHHhC
Confidence 366777777899999999864321 235677888888 8999999999 7999998884 9999999998764
No 129
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=97.43 E-value=6.2e-05 Score=71.72 Aligned_cols=70 Identities=23% Similarity=0.329 Sum_probs=53.1
Q ss_pred HHHHHHhhhccccEEEecCCCCC------------CCC--CHHHHHHHHhcCCCCEEEecCC-ChHhHHHhhc--CCEEE
Q psy9039 176 TETAKAASFFLSDGLIITGNATG------------DPA--DVSQLMSVKNAVDLPILIGSGV-TSDNVEHYMT--ADALI 238 (251)
Q Consensus 176 ~~~a~~a~~~~~D~v~VTG~~~g------------~~~--~~~~l~~vr~~~~~PV~vG~GI-~~~~v~~~~~--ADGvI 238 (251)
.+.++.+...|+|++.|+ .+.| .+. .+..+.++++..++||++.||| +++++.+++. ||+|.
T Consensus 307 ~~~a~~l~~aGad~I~vg-~~~G~~~~t~~~~~~g~~~~~~~~~~~~~~~~~~ipVia~GGI~~~~di~kala~GAd~V~ 385 (514)
T 1jcn_A 307 AAQAKNLIDAGVDGLRVG-MGCGSICITQEVMACGRPQGTAVYKVAEYARRFGVPIIADGGIQTVGHVVKALALGASTVM 385 (514)
T ss_dssp HHHHHHHHHHTCSEEEEC-SSCSCCBTTBCCCSCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHcCCCEEEEC-CCCCcccccccccCCCccchhHHHHHHHHHhhCCCCEEEECCCCCHHHHHHHHHcCCCeee
Confidence 445666767799999883 2222 111 2466788888889999999999 6899999886 99999
Q ss_pred EeceEeec
Q psy9039 239 IGSHFKQG 246 (251)
Q Consensus 239 VGS~~~~~ 246 (251)
+||.|..+
T Consensus 386 iG~~~l~~ 393 (514)
T 1jcn_A 386 MGSLLAAT 393 (514)
T ss_dssp ESTTTTTS
T ss_pred ECHHHHcC
Confidence 99988653
No 130
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=97.42 E-value=8.2e-05 Score=63.85 Aligned_cols=73 Identities=19% Similarity=0.250 Sum_probs=55.6
Q ss_pred cHHHHHHHhhhccccEEEecCCCCCC---CCCHHHHHHHHhcCCCCEEEecCC-ChHhHHHhhc--CCEEEEeceEeec
Q psy9039 174 DITETAKAASFFLSDGLIITGNATGD---PADVSQLMSVKNAVDLPILIGSGV-TSDNVEHYMT--ADALIIGSHFKQG 246 (251)
Q Consensus 174 ~i~~~a~~a~~~~~D~v~VTG~~~g~---~~~~~~l~~vr~~~~~PV~vG~GI-~~~~v~~~~~--ADGvIVGS~~~~~ 246 (251)
...++++..+..|+|.+-++...... ....+.++++++.+++|+++++|| +++++.+++. ||++++|+....+
T Consensus 31 d~~~~a~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~~~~~ipvi~~ggI~~~~~~~~~~~~Gad~V~lg~~~l~~ 109 (253)
T 1thf_D 31 DPVELGKFYSEIGIDELVFLDITASVEKRKTMLELVEKVAEQIDIPFTVGGGIHDFETASELILRGADKVSINTAAVEN 109 (253)
T ss_dssp CHHHHHHHHHHTTCCEEEEEESSCSSSHHHHHHHHHHHHHTTCCSCEEEESSCCSHHHHHHHHHTTCSEEEESHHHHHC
T ss_pred CHHHHHHHHHHcCCCEEEEECCchhhcCCcccHHHHHHHHHhCCCCEEEeCCCCCHHHHHHHHHcCCCEEEEChHHHhC
Confidence 44566666666799999887543221 123567888999899999999999 6899999886 9999999987554
No 131
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=97.38 E-value=9.1e-05 Score=63.38 Aligned_cols=72 Identities=15% Similarity=0.101 Sum_probs=56.1
Q ss_pred cHHHHHHHhhhccccEEEecCCCC---CCCCCHHHHHHHHhcCCCCEEEecCC-ChHhHHHhhc--CCEEEEeceEeec
Q psy9039 174 DITETAKAASFFLSDGLIITGNAT---GDPADVSQLMSVKNAVDLPILIGSGV-TSDNVEHYMT--ADALIIGSHFKQG 246 (251)
Q Consensus 174 ~i~~~a~~a~~~~~D~v~VTG~~~---g~~~~~~~l~~vr~~~~~PV~vG~GI-~~~~v~~~~~--ADGvIVGS~~~~~ 246 (251)
...++++.....|+|.+.+|.... +.....+.+++++ .+++||+++||| +++++.+++. ||++++|+.+..+
T Consensus 31 ~~~~~a~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~-~~~ipvi~~Ggi~~~~~~~~~~~~Gad~V~lg~~~l~~ 108 (241)
T 1qo2_A 31 DPVELVEKLIEEGFTLIHVVDLSNAIENSGENLPVLEKLS-EFAEHIQIGGGIRSLDYAEKLRKLGYRRQIVSSKVLED 108 (241)
T ss_dssp CHHHHHHHHHHTTCCCEEEEEHHHHHHCCCTTHHHHHHGG-GGGGGEEEESSCCSHHHHHHHHHTTCCEEEECHHHHHC
T ss_pred CHHHHHHHHHHcCCCEEEEecccccccCCchhHHHHHHHH-hcCCcEEEECCCCCHHHHHHHHHCCCCEEEECchHhhC
Confidence 345566666667999998886321 2344678888888 789999999999 6899999886 9999999987654
No 132
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=97.37 E-value=0.00017 Score=66.11 Aligned_cols=68 Identities=18% Similarity=0.173 Sum_probs=50.4
Q ss_pred HHHHHHhhhccccEEEecCCCCCC-----------CCCHHHHHHHHhcCCCCEEEecCC-ChHhHHHhhc--CCEEEEec
Q psy9039 176 TETAKAASFFLSDGLIITGNATGD-----------PADVSQLMSVKNAVDLPILIGSGV-TSDNVEHYMT--ADALIIGS 241 (251)
Q Consensus 176 ~~~a~~a~~~~~D~v~VTG~~~g~-----------~~~~~~l~~vr~~~~~PV~vG~GI-~~~~v~~~~~--ADGvIVGS 241 (251)
.+.++.+...|+|++.|+.. .|. .+.++.|.++++... ||++-||| ++.++.+++. ||+|.+||
T Consensus 152 ~e~A~~a~~aGaD~I~Vg~g-~G~~~~tr~~~g~g~p~l~aI~~~~~~~~-PVIAdGGI~~~~di~kALa~GAd~V~iGr 229 (361)
T 3r2g_A 152 YAGADYLASCGADIIKAGIG-GGSVCSTRIKTGFGVPMLTCIQDCSRADR-SIVADGGIKTSGDIVKALAFGADFVMIGG 229 (361)
T ss_dssp HHHHHHHHHTTCSEEEECCS-SSSCHHHHHHHCCCCCHHHHHHHHTTSSS-EEEEESCCCSHHHHHHHHHTTCSEEEESG
T ss_pred HHHHHHHHHcCCCEEEEcCC-CCcCccccccCCccHHHHHHHHHHHHhCC-CEEEECCCCCHHHHHHHHHcCCCEEEECh
Confidence 34566777789999999522 221 223466666666555 99999999 6999999886 99999999
Q ss_pred eEee
Q psy9039 242 HFKQ 245 (251)
Q Consensus 242 ~~~~ 245 (251)
.|..
T Consensus 230 ~f~~ 233 (361)
T 3r2g_A 230 MLAG 233 (361)
T ss_dssp GGTT
T ss_pred HHhC
Confidence 9864
No 133
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=97.35 E-value=0.00013 Score=67.58 Aligned_cols=70 Identities=21% Similarity=0.393 Sum_probs=54.9
Q ss_pred HHHHHHhhhccccEEEecCC--CC--CCCCCHHHHHHHHhcC--CCCEEEecCC-ChHhHHHhhc--CCEEEEeceEee
Q psy9039 176 TETAKAASFFLSDGLIITGN--AT--GDPADVSQLMSVKNAV--DLPILIGSGV-TSDNVEHYMT--ADALIIGSHFKQ 245 (251)
Q Consensus 176 ~~~a~~a~~~~~D~v~VTG~--~~--g~~~~~~~l~~vr~~~--~~PV~vG~GI-~~~~v~~~~~--ADGvIVGS~~~~ 245 (251)
.+.++.+...|+|++.|+|. +. +..+..+.+.++++.+ ++||++.||| +++++.+++. ||+|.+|+.|..
T Consensus 263 ~e~A~~a~~aGad~I~vs~~ggr~~~~g~~~~~~l~~v~~av~~~ipVia~GGI~~g~Dv~kalalGAd~V~iGr~~l~ 341 (392)
T 2nzl_A 263 GDDAREAVKHGLNGILVSNHGARQLDGVPATIDVLPEIVEAVEGKVEVFLDGGVRKGTDVLKALALGAKAVFVGRPIVW 341 (392)
T ss_dssp HHHHHHHHHTTCCEEEECCGGGTSSTTCCCHHHHHHHHHHHHTTSSEEEECSSCCSHHHHHHHHHTTCSEEEECHHHHH
T ss_pred HHHHHHHHHcCCCEEEeCCCCCCcCCCCcChHHHHHHHHHHcCCCCEEEEECCCCCHHHHHHHHHhCCCeeEECHHHHH
Confidence 45567777789999999763 11 2234567888888876 5999999999 7999998886 999999998754
No 134
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=97.35 E-value=0.00017 Score=65.69 Aligned_cols=69 Identities=14% Similarity=0.184 Sum_probs=49.8
Q ss_pred HHHHHHhhhccccEEEecCCCCC----------CCCCHHHHHHHHh---cCCCCEEEecCC-ChHhHHHhhc--CCEEEE
Q psy9039 176 TETAKAASFFLSDGLIITGNATG----------DPADVSQLMSVKN---AVDLPILIGSGV-TSDNVEHYMT--ADALII 239 (251)
Q Consensus 176 ~~~a~~a~~~~~D~v~VTG~~~g----------~~~~~~~l~~vr~---~~~~PV~vG~GI-~~~~v~~~~~--ADGvIV 239 (251)
.+.|+.+...|+|++.|+..... ..+....+.++.+ ..++||++.||| ++.++.+++. ||+|.+
T Consensus 172 ~e~A~~a~~aGaD~I~v~~g~G~~~~~r~~~g~~~p~~~~l~~v~~~~~~~~ipvIa~GGI~~g~di~kAlalGA~~V~v 251 (351)
T 2c6q_A 172 GEMVEELILSGADIIKVGIGPGSVCTTRKKTGVGYPQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGAGADFVML 251 (351)
T ss_dssp HHHHHHHHHTTCSEEEECSSCSTTBCHHHHHCBCCCHHHHHHHHHHHHHHTTCEEEEESCCCSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHhCCCEEEECCCCCcCcCccccCCCCccHHHHHHHHHHHHhhcCCcEEEeCCCCCHHHHHHHHHcCCCceec
Confidence 45567777789999988642210 1233444444443 357999999999 7999998886 999999
Q ss_pred eceEe
Q psy9039 240 GSHFK 244 (251)
Q Consensus 240 GS~~~ 244 (251)
||.|.
T Consensus 252 G~~fl 256 (351)
T 2c6q_A 252 GGMLA 256 (351)
T ss_dssp STTTT
T ss_pred cHHHh
Confidence 99996
No 135
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=97.31 E-value=0.00016 Score=62.84 Aligned_cols=142 Identities=13% Similarity=0.181 Sum_probs=81.9
Q ss_pred ccEEEEEeeCCh----------HHHHHHHHHcCccce--ecccccccccCCCceeecCcchhHHHHHhcCCCcchhhhhh
Q psy9039 93 VPVGVQILSGCN----------KAALATAQAAGLDFI--RAESFVFGHMADEGLMNAQAGPLLRYRKQIGADNVLVFTDI 160 (251)
Q Consensus 93 ~P~Gvn~~~N~~----------~~~~~ia~a~g~~Fi--r~~~~~~~~~~~~Gli~~da~e~~~~r~~l~~~~i~i~a~v 160 (251)
+|+.+.+-.... ......+...|++++ ... .+. . ...-......++.+.+++++.. ++..+
T Consensus 80 ~~~~v~~~~~~~~~~d~~~~~~~~~v~~a~~~Ga~~v~~~l~--~~~-~-~~~~~~~~~~~v~~~~~~~g~~---viv~~ 152 (273)
T 2qjg_A 80 VGLIIHLSGGTAISPNPLKKVIVTTVEEAIRMGADAVSIHVN--VGS-D-EDWEAYRDLGMIAETCEYWGMP---LIAMM 152 (273)
T ss_dssp CEEEEECEECCTTSSSTTCCEECSCHHHHHHTTCSEEEEEEE--ETS-T-THHHHHHHHHHHHHHHHHHTCC---EEEEE
T ss_pred CCEEEEEcCCCcCCCCcccchHHHHHHHHHHcCCCEEEEEEe--cCC-C-CHHHHHHHHHHHHHHHHHcCCC---EEEEe
Confidence 588777654321 234555667788887 321 110 0 0001111244556666666652 22111
Q ss_pred HhhccCCCC--CCcccHHHHHHHhhhccccEEEecCCCCCCCCCHHHHHHHHhcCCCCEEEecCCCh---Hh----HHHh
Q psy9039 161 KKKHSSHAI--TADVDITETAKAASFFLSDGLIITGNATGDPADVSQLMSVKNAVDLPILIGSGVTS---DN----VEHY 231 (251)
Q Consensus 161 ~~k~~~~~~--~~~~~i~~~a~~a~~~~~D~v~VTG~~~g~~~~~~~l~~vr~~~~~PV~vG~GI~~---~~----v~~~ 231 (251)
.. .|.++. .+...+.+.++.+...|+|.+.+.- +.+++.++++++.+++||++-|||+. ++ +.++
T Consensus 153 ~~-~G~~l~~~~~~~~~~~~a~~a~~~Gad~i~~~~-----~~~~~~l~~i~~~~~ipvva~GGi~~~~~~~~~~~~~~~ 226 (273)
T 2qjg_A 153 YP-RGKHIQNERDPELVAHAARLGAELGADIVKTSY-----TGDIDSFRDVVKGCPAPVVVAGGPKTNTDEEFLQMIKDA 226 (273)
T ss_dssp EE-CSTTCSCTTCHHHHHHHHHHHHHTTCSEEEECC-----CSSHHHHHHHHHHCSSCEEEECCSCCSSHHHHHHHHHHH
T ss_pred CC-CCcccCCCCCHhHHHHHHHHHHHcCCCEEEECC-----CCCHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHH
Confidence 11 132220 1112334444666667999888762 34688899999888999999999973 44 6666
Q ss_pred hc--CCEEEEeceEeecC
Q psy9039 232 MT--ADALIIGSHFKQGG 247 (251)
Q Consensus 232 ~~--ADGvIVGS~~~~~g 247 (251)
+. |||+.+||+|.+..
T Consensus 227 ~~~Ga~gv~vg~~i~~~~ 244 (273)
T 2qjg_A 227 MEAGAAGVAVGRNIFQHD 244 (273)
T ss_dssp HHHTCSEEECCHHHHTSS
T ss_pred HHcCCcEEEeeHHhhCCC
Confidence 65 99999999987653
No 136
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=97.26 E-value=0.00024 Score=67.94 Aligned_cols=69 Identities=20% Similarity=0.316 Sum_probs=53.5
Q ss_pred HHHHHHhhhccccEEEecCCCCCC-----CCCHHHHHHHHhcC-------CCCEEEecCC-ChHhHHHhhc--CCEEEEe
Q psy9039 176 TETAKAASFFLSDGLIITGNATGD-----PADVSQLMSVKNAV-------DLPILIGSGV-TSDNVEHYMT--ADALIIG 240 (251)
Q Consensus 176 ~~~a~~a~~~~~D~v~VTG~~~g~-----~~~~~~l~~vr~~~-------~~PV~vG~GI-~~~~v~~~~~--ADGvIVG 240 (251)
.+.|+.+...|+|++.|+|. .|. .+.++.+.++++.+ ++||++-||| +++++.+++. ||+|.+|
T Consensus 354 ~e~A~~a~~aGad~I~vs~h-gG~~~d~~~~~~~~l~~v~~~v~~~~~~~~ipVia~GGI~~g~Dv~kaLalGAdaV~iG 432 (511)
T 1kbi_A 354 TEDVIKAAEIGVSGVVLSNH-GGRQLDFSRAPIEVLAETMPILEQRNLKDKLEVFVDGGVRRGTDVLKALCLGAKGVGLG 432 (511)
T ss_dssp HHHHHHHHHTTCSEEEECCT-TTTSSTTCCCHHHHHHHHHHHHHTTTCBTTBEEEEESSCCSHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHHcCCCEEEEcCC-CCccCCCCCchHHHHHHHHHHHHhhccCCCcEEEEECCCCCHHHHHHHHHcCCCEEEEC
Confidence 45567777789999999773 221 23356777777765 7999999999 7999998886 9999999
Q ss_pred ceEee
Q psy9039 241 SHFKQ 245 (251)
Q Consensus 241 S~~~~ 245 (251)
+.|..
T Consensus 433 r~~l~ 437 (511)
T 1kbi_A 433 RPFLY 437 (511)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98753
No 137
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=97.22 E-value=0.00032 Score=64.20 Aligned_cols=72 Identities=18% Similarity=0.127 Sum_probs=56.4
Q ss_pred HHHHHHhhhccccEEEecCCCC-CCC-CCHHHHHHHHhcCCCCEEEecCCChHhHHHhhc---CCEEEEeceEeecC
Q psy9039 176 TETAKAASFFLSDGLIITGNAT-GDP-ADVSQLMSVKNAVDLPILIGSGVTSDNVEHYMT---ADALIIGSHFKQGG 247 (251)
Q Consensus 176 ~~~a~~a~~~~~D~v~VTG~~~-g~~-~~~~~l~~vr~~~~~PV~vG~GI~~~~v~~~~~---ADGvIVGS~~~~~g 247 (251)
.++++.++..|+|++.+++... +.+ ...+.++++|+.+++||++.|||+++++.+++. ||+|.+|+.|+.|-
T Consensus 253 ~~~a~~l~~~G~d~i~v~~~~~~~~~~~~~~~~~~i~~~~~iPvi~~Ggi~~~~a~~~l~~g~aD~V~igR~~i~~P 329 (365)
T 2gou_A 253 TAAAALLNKHRIVYLHIAEVDWDDAPDTPVSFKRALREAYQGVLIYAGRYNAEKAEQAINDGLADMIGFGRPFIANP 329 (365)
T ss_dssp HHHHHHHHHTTCSEEEEECCBTTBCCCCCHHHHHHHHHHCCSEEEEESSCCHHHHHHHHHTTSCSEEECCHHHHHCT
T ss_pred HHHHHHHHHcCCCEEEEeCCCcCCCCCccHHHHHHHHHHCCCcEEEeCCCCHHHHHHHHHCCCcceehhcHHHHhCc
Confidence 3445555567999999987521 111 235778899999999999999999999999984 99999999988763
No 138
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.21 E-value=0.0013 Score=64.67 Aligned_cols=196 Identities=13% Similarity=0.084 Sum_probs=111.9
Q ss_pred cCCCCccEEEEeecC------CCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeCC----------------
Q psy9039 46 VPVGVQHGVIVENMH------DVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQILSGC---------------- 103 (251)
Q Consensus 46 ~~~Gv~D~i~ieN~~------~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~---------------- 103 (251)
.++|+ ..|+.|+.. +.|+..+.-..+.....+.++++.+++. . .+++++++-..
T Consensus 54 a~gG~-gliite~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vh~~-g--~~i~~Ql~h~Gr~~~~~~~~~~~~~ps 129 (690)
T 3k30_A 54 AEGGW-SAVCTEQVEIHATSDIAPFIELRIWDDQDLPALKRIADAIHEG-G--GLAGIELAHNGMNAPNQLSRETPLGPG 129 (690)
T ss_dssp HHTTC-SEEEEEEEECSGGGCCTTSCCEECSSGGGHHHHHHHHHHHHHT-T--CEEEEEEECCGGGCCCTTTCCCCEESS
T ss_pred hccCC-EEEEecceEeccccccCCCcCCccCCHHHHHHHHHHHHHHHhc-C--CEEEEEccCCcccccccccCCCccCCC
Confidence 35888 888877432 2343321223456778899999999875 4 48899987210
Q ss_pred -------------h---------------HHHHHHHHHcCccceeccccccc------------ccCCC--ceeecC---
Q psy9039 104 -------------N---------------KAALATAQAAGLDFIRAESFVFG------------HMADE--GLMNAQ--- 138 (251)
Q Consensus 104 -------------~---------------~~~~~ia~a~g~~Fir~~~~~~~------------~~~~~--Gli~~d--- 138 (251)
+ ..+...|...|.+.+.++.-.|. .-+++ |-++.+
T Consensus 130 ~~~~~~~~~~~~~p~~~t~~ei~~~i~~f~~aA~~a~~aGfDgVeih~a~gy~L~~qFlsp~~N~R~D~yGGs~enR~r~ 209 (690)
T 3k30_A 130 HLPVAPDTIAPIQARAMTKQDIDDLRRWHRNAVRRSIEAGYDIVYVYGAHGYSGVHHFLSKRYNQRTDEYGGSLENRMRL 209 (690)
T ss_dssp SCBSCSSCCCSCBCEECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTCSHHHHHHCTTTCCCCSTTSSSHHHHTHH
T ss_pred CCcccccccCCCCCCcCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEcccccchHHHHhCCCccCCCccccCCCHHHHHHH
Confidence 0 11233344567788888644443 11111 333332
Q ss_pred cchh-HHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCC------C----CCCCCHHHHH
Q psy9039 139 AGPL-LRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNA------T----GDPADVSQLM 207 (251)
Q Consensus 139 a~e~-~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~------~----g~~~~~~~l~ 207 (251)
..|+ ...|+..|. +..+...+.+....+.-.+.....++++..+. ++|++-|++.. . ......+.++
T Consensus 210 ~~ei~~avr~~~g~-~~~v~~r~s~~~~~~~g~~~~~~~~~~~~l~~-~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (690)
T 3k30_A 210 LRELLEDTLDECAG-RAAVACRITVEEEIDGGITREDIEGVLRELGE-LPDLWDFAMGSWEGDSVTSRFAPEGRQEEFVA 287 (690)
T ss_dssp HHHHHHHHHHHHTT-SSEEEEEEECCCCSTTSCCHHHHHHHHHHHTT-SSSEEEEECSCHHHHTCCTTTCCTTTTHHHHT
T ss_pred HHHHHHHHHHHhCC-CceEEEEECccccCCCCCCHHHHHHHHHHHHh-hcCEEEEecccccccCCCCccCCccccHHHHH
Confidence 2222 235555654 32232222211100000111223344444444 79999887632 0 1111246788
Q ss_pred HHHhcCCCCEEEecCC-ChHhHHHhhc---CCEEEEeceEeecC
Q psy9039 208 SVKNAVDLPILIGSGV-TSDNVEHYMT---ADALIIGSHFKQGG 247 (251)
Q Consensus 208 ~vr~~~~~PV~vG~GI-~~~~v~~~~~---ADGvIVGS~~~~~g 247 (251)
++|+.+++||+..||| +++.+.+++. ||+|.+|..|+.|-
T Consensus 288 ~i~~~~~~pvi~~G~i~~~~~a~~~l~~g~~d~v~~gR~~~~~P 331 (690)
T 3k30_A 288 GLKKLTTKPVVGVGRFTSPDAMVRQIKAGILDLIGAARPSIADP 331 (690)
T ss_dssp TSGGGCSSCEEECSCCCCHHHHHHHHHTTSCSEEEESHHHHHCT
T ss_pred HHHHHcCCeEEEeCCCCCHHHHHHHHHCCCcceEEEcHHhHhCc
Confidence 8999999999999999 6899998884 99999999887664
No 139
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=97.16 E-value=0.0068 Score=51.80 Aligned_cols=64 Identities=14% Similarity=0.302 Sum_probs=45.7
Q ss_pred HHhhhccccEEEecCCCCC--CCCCHHHHHHHHhcC--CCCEEEecCCChHhHHHhhc---CCEEEEeceEe
Q psy9039 180 KAASFFLSDGLIITGNATG--DPADVSQLMSVKNAV--DLPILIGSGVTSDNVEHYMT---ADALIIGSHFK 244 (251)
Q Consensus 180 ~~a~~~~~D~v~VTG~~~g--~~~~~~~l~~vr~~~--~~PV~vG~GI~~~~v~~~~~---ADGvIVGS~~~ 244 (251)
+.....|+|.+-.+|.... .....+.|+++.+.. .+-|++|+||+++|+.++++ ++-+= ||.++
T Consensus 140 e~L~~lGv~rILTSG~~~~~~a~~g~~~L~~Lv~~a~~ri~Im~GgGV~~~Ni~~l~~~tGv~e~H-~s~i~ 210 (224)
T 2bdq_A 140 DQLVALGFTRILLHGSSNGEPIIENIKHIKALVEYANNRIEIMVGGGVTAENYQYICQETGVKQAH-GTRIT 210 (224)
T ss_dssp HHHHHTTCCEEEECSCSSCCCGGGGHHHHHHHHHHHTTSSEEEECSSCCTTTHHHHHHHHTCCEEE-ETTCC
T ss_pred HHHHHcCCCEEECCCCCCCCcHHHHHHHHHHHHHhhCCCeEEEeCCCCCHHHHHHHHHhhCCCEEc-ccccc
Confidence 4444569999999998776 334467777765543 57799999999999999883 65554 44443
No 140
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=97.15 E-value=0.00031 Score=59.81 Aligned_cols=70 Identities=9% Similarity=0.124 Sum_probs=52.6
Q ss_pred HHHHHHHhhhccccEEEec---CCCCCCCCCHHHHHHHHhcCCCCEEEecCC-ChHhHHHhhc--CCEEEEeceEee
Q psy9039 175 ITETAKAASFFLSDGLIIT---GNATGDPADVSQLMSVKNAVDLPILIGSGV-TSDNVEHYMT--ADALIIGSHFKQ 245 (251)
Q Consensus 175 i~~~a~~a~~~~~D~v~VT---G~~~g~~~~~~~l~~vr~~~~~PV~vG~GI-~~~~v~~~~~--ADGvIVGS~~~~ 245 (251)
..++++.....|+|.+-+. |...+.... +.++++++.+++|+++++|| +++++.+++. ||++.+|+....
T Consensus 33 ~~~~a~~~~~~Gad~i~v~~~d~~~~~~~~~-~~i~~i~~~~~ipv~v~ggi~~~~~~~~~l~~Gad~V~lg~~~l~ 108 (244)
T 2y88_A 33 AVDAALGWQRDGAEWIHLVDLDAAFGRGSNH-ELLAEVVGKLDVQVELSGGIRDDESLAAALATGCARVNVGTAALE 108 (244)
T ss_dssp HHHHHHHHHHTTCSEEEEEEHHHHTTSCCCH-HHHHHHHHHCSSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEEcCcccccCCChH-HHHHHHHHhcCCcEEEECCCCCHHHHHHHHHcCCCEEEECchHhh
Confidence 3455555555688888764 333233333 78999999999999999999 6899999986 999999997654
No 141
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=97.13 E-value=0.0021 Score=53.83 Aligned_cols=65 Identities=14% Similarity=0.243 Sum_probs=47.5
Q ss_pred HHHHHHHhhhccccEEEecCCCCCCCCCHHHHHHHHhcCC-CCEEEecCCChH--hHHHhhc--CCEEEEeceEee
Q psy9039 175 ITETAKAASFFLSDGLIITGNATGDPADVSQLMSVKNAVD-LPILIGSGVTSD--NVEHYMT--ADALIIGSHFKQ 245 (251)
Q Consensus 175 i~~~a~~a~~~~~D~v~VTG~~~g~~~~~~~l~~vr~~~~-~PV~vG~GI~~~--~v~~~~~--ADGvIVGS~~~~ 245 (251)
....++.+...|.|++.+... ..+.++++|+..+ .++++-+||+++ ++.++++ ||++++||++.+
T Consensus 121 v~~~~~~a~~~G~~G~~~~~~------~~~~i~~lr~~~~~~~~iv~gGI~~~g~~~~~~~~aGad~vvvGr~I~~ 190 (208)
T 2czd_A 121 TDRFIEVANEIEPFGVIAPGT------RPERIGYIRDRLKEGIKILAPGIGAQGGKAKDAVKAGADYIIVGRAIYN 190 (208)
T ss_dssp HHHHHHHHHHHCCSEEECCCS------STHHHHHHHHHSCTTCEEEECCCCSSTTHHHHHHHHTCSEEEECHHHHT
T ss_pred HHHHHHHHHHhCCcEEEECCC------ChHHHHHHHHhCCCCeEEEECCCCCCCCCHHHHHHcCCCEEEEChHHhc
Confidence 445555555568888755532 2466777887764 467899999876 8888886 999999998765
No 142
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=97.05 E-value=0.00056 Score=59.74 Aligned_cols=68 Identities=15% Similarity=0.118 Sum_probs=53.5
Q ss_pred HHHHHHhhhccccEEEe---cCCCCCCCCCHHHHHHHHhcCCCCEEEecCCChHhHHHhhc-CCEEEEeceEeec-Cee
Q psy9039 176 TETAKAASFFLSDGLII---TGNATGDPADVSQLMSVKNAVDLPILIGSGVTSDNVEHYMT-ADALIIGSHFKQG-GRT 249 (251)
Q Consensus 176 ~~~a~~a~~~~~D~v~V---TG~~~g~~~~~~~l~~vr~~~~~PV~vG~GI~~~~v~~~~~-ADGvIVGS~~~~~-g~~ 249 (251)
.+.|+.....|++.+.+ ++ .+.+.++++.+.+++|+.+||||+..++++++. ||-+++||+.++| |++
T Consensus 41 ~~~A~~~~~~Ga~~l~vvDL~~------~n~~~i~~i~~~~~~pv~vgGGir~~~~~~~l~Ga~~Viigs~a~~~~g~~ 113 (260)
T 2agk_A 41 SYYAKLYKDRDVQGCHVIKLGP------NNDDAAREALQESPQFLQVGGGINDTNCLEWLKWASKVIVTSWLFTKEGHF 113 (260)
T ss_dssp HHHHHHHHHTTCTTCEEEEESS------SCHHHHHHHHHHSTTTSEEESSCCTTTHHHHTTTCSCEEECGGGBCTTCCB
T ss_pred HHHHHHHHHcCCCEEEEEeCCC------CCHHHHHHHHhcCCceEEEeCCCCHHHHHHHhcCCCEEEECcHHHhhcCCC
Confidence 44555555457777766 65 467889999998999999999996458888888 9999999998888 654
No 143
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=97.04 E-value=0.00032 Score=59.40 Aligned_cols=73 Identities=21% Similarity=0.278 Sum_probs=55.5
Q ss_pred cHHHHHHHhhhccccEEEecCCCCCCC---CCHHHHHHHHhcCCCCEEEecCC-ChHhHHHhhc--CCEEEEeceEeec
Q psy9039 174 DITETAKAASFFLSDGLIITGNATGDP---ADVSQLMSVKNAVDLPILIGSGV-TSDNVEHYMT--ADALIIGSHFKQG 246 (251)
Q Consensus 174 ~i~~~a~~a~~~~~D~v~VTG~~~g~~---~~~~~l~~vr~~~~~PV~vG~GI-~~~~v~~~~~--ADGvIVGS~~~~~ 246 (251)
...+.++.....|+|++.++....... ...+.++++++.+++|+++++|+ +++++.+++. ||++.+|+.+..+
T Consensus 34 ~~~~~a~~~~~~G~d~i~v~~~~~~~~~~~~~~~~i~~i~~~~~ipvi~~g~i~~~~~~~~~~~~Gad~V~i~~~~~~~ 112 (253)
T 1h5y_A 34 DPVEMAVRYEEEGADEIAILDITAAPEGRATFIDSVKRVAEAVSIPVLVGGGVRSLEDATTLFRAGADKVSVNTAAVRN 112 (253)
T ss_dssp CHHHHHHHHHHTTCSCEEEEECCCCTTTHHHHHHHHHHHHHHCSSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHHHC
T ss_pred cHHHHHHHHHHcCCCEEEEEeCCccccCCcccHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCCCEEEEChHHhhC
Confidence 455666766667999998875432211 23467888998889999999999 6899988886 9999999876543
No 144
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=97.03 E-value=0.00038 Score=59.44 Aligned_cols=71 Identities=14% Similarity=0.154 Sum_probs=53.5
Q ss_pred cHHHHHHHhhhccccEEEecC---CCCCCCCCHHHHHHHHhcCCCCEEEecCC-ChHhHHHhhc--CCEEEEeceEee
Q psy9039 174 DITETAKAASFFLSDGLIITG---NATGDPADVSQLMSVKNAVDLPILIGSGV-TSDNVEHYMT--ADALIIGSHFKQ 245 (251)
Q Consensus 174 ~i~~~a~~a~~~~~D~v~VTG---~~~g~~~~~~~l~~vr~~~~~PV~vG~GI-~~~~v~~~~~--ADGvIVGS~~~~ 245 (251)
...+.++.....|+|.+-+.. ...+.... +.++++++.+++|+++++|| +++++.+++. ||++.+|+....
T Consensus 33 d~~~~a~~~~~~Gad~i~v~~~d~~~~~~~~~-~~i~~i~~~~~ipv~v~ggI~~~~~~~~~l~~Gad~V~lg~~~l~ 109 (244)
T 1vzw_A 33 SPLEAALAWQRSGAEWLHLVDLDAAFGTGDNR-ALIAEVAQAMDIKVELSGGIRDDDTLAAALATGCTRVNLGTAALE 109 (244)
T ss_dssp CHHHHHHHHHHTTCSEEEEEEHHHHHTSCCCH-HHHHHHHHHCSSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHH
T ss_pred CHHHHHHHHHHcCCCEEEEecCchhhcCCChH-HHHHHHHHhcCCcEEEECCcCCHHHHHHHHHcCCCEEEECchHhh
Confidence 345555665557889886643 32233444 77999999999999999999 6899998886 999999996543
No 145
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=97.02 E-value=0.0032 Score=52.96 Aligned_cols=44 Identities=9% Similarity=0.328 Sum_probs=37.9
Q ss_pred CHHHHHHHHhcC--CCCEEEecCCChHhHHHhhc--CCEEEEeceEee
Q psy9039 202 DVSQLMSVKNAV--DLPILIGSGVTSDNVEHYMT--ADALIIGSHFKQ 245 (251)
Q Consensus 202 ~~~~l~~vr~~~--~~PV~vG~GI~~~~v~~~~~--ADGvIVGS~~~~ 245 (251)
..+.++++|+.. +.|+++-+||+++++.++++ ||+++|||++.+
T Consensus 149 ~~~~i~~lr~~~~~~~~i~v~GGI~~~~~~~~~~aGad~ivvG~~I~~ 196 (216)
T 1q6o_A 149 GEADITAIKRLSDMGFKVTVTGGLALEDLPLFKGIPIHVFIAGRSIRD 196 (216)
T ss_dssp CHHHHHHHHHHHHTTCEEEEESSCCGGGGGGGTTSCCSEEEESHHHHT
T ss_pred CHHHHHHHHHhcCCCCcEEEECCcChhhHHHHHHcCCCEEEEeehhcC
Confidence 467788888776 68899999999999999986 999999998765
No 146
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=96.96 E-value=0.00085 Score=63.42 Aligned_cols=68 Identities=21% Similarity=0.377 Sum_probs=49.3
Q ss_pred HHHHHHhhhccccEEEecCCCCC-----------CCCCHHHHHHHHh---cCCCCEEEecCC-ChHhHHHhhc--CCEEE
Q psy9039 176 TETAKAASFFLSDGLIITGNATG-----------DPADVSQLMSVKN---AVDLPILIGSGV-TSDNVEHYMT--ADALI 238 (251)
Q Consensus 176 ~~~a~~a~~~~~D~v~VTG~~~g-----------~~~~~~~l~~vr~---~~~~PV~vG~GI-~~~~v~~~~~--ADGvI 238 (251)
.+.++.+...|+|++.|++. .| ..+....+..+++ ..++||++.||| +++++.+++. ||+|.
T Consensus 289 ~e~a~~l~~~G~d~I~v~~~-~G~~~~~~~~~~~g~p~~~~l~~v~~~~~~~~ipvia~GGI~~~~di~kala~GAd~V~ 367 (494)
T 1vrd_A 289 PEGTEALIKAGADAVKVGVG-PGSICTTRVVAGVGVPQLTAVMECSEVARKYDVPIIADGGIRYSGDIVKALAAGAESVM 367 (494)
T ss_dssp HHHHHHHHHTTCSEEEECSS-CSTTCHHHHHHCCCCCHHHHHHHHHHHHHTTTCCEEEESCCCSHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHcCCCEEEEcCC-CCccccccccCCCCccHHHHHHHHHHHHhhcCCCEEEECCcCCHHHHHHHHHcCCCEEE
Confidence 34456666679999999543 22 1233444454444 368999999999 7999999886 99999
Q ss_pred EeceEe
Q psy9039 239 IGSHFK 244 (251)
Q Consensus 239 VGS~~~ 244 (251)
+|++|.
T Consensus 368 iGr~~l 373 (494)
T 1vrd_A 368 VGSIFA 373 (494)
T ss_dssp ESHHHH
T ss_pred ECHHHh
Confidence 999995
No 147
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=96.90 E-value=0.00085 Score=61.55 Aligned_cols=69 Identities=19% Similarity=0.218 Sum_probs=52.7
Q ss_pred HHHHHHhhhccccEEEecCCCCC----------------------------CCCCHHHHHHHHhcC-CCCEEEecCC-Ch
Q psy9039 176 TETAKAASFFLSDGLIITGNATG----------------------------DPADVSQLMSVKNAV-DLPILIGSGV-TS 225 (251)
Q Consensus 176 ~~~a~~a~~~~~D~v~VTG~~~g----------------------------~~~~~~~l~~vr~~~-~~PV~vG~GI-~~ 225 (251)
.+.|+.+...|+|++.|+|.. | ..+....+.++++.. ++||++-||| ++
T Consensus 201 ~~~A~~l~~aGad~I~V~g~G-Gt~~~~iE~~R~~~~~~~~~~~~~~~~~~g~pt~~~l~~v~~~~~~ipvia~GGI~~~ 279 (368)
T 3vkj_A 201 METAKLLYSYGIKNFDTSGQG-GTNWIAIEMIRDIRRGNWKAESAKNFLDWGVPTAASIMEVRYSVPDSFLVGSGGIRSG 279 (368)
T ss_dssp HHHHHHHHHTTCCEEECCCBT-SBCHHHHHHHHHHHTTCTHHHHHHHTTTCSCBHHHHHHHHHHHSTTCEEEEESSCCSH
T ss_pred HHHHHHHHhCCCCEEEEeCCC-CCcccchhhhhcccccccchhhccccccccccHHHHHHHHHHHcCCCcEEEECCCCCH
Confidence 455677777899999997751 2 112234567788777 5999999999 79
Q ss_pred HhHHHhhc--CCEEEEeceEee
Q psy9039 226 DNVEHYMT--ADALIIGSHFKQ 245 (251)
Q Consensus 226 ~~v~~~~~--ADGvIVGS~~~~ 245 (251)
.++.+.+. ||+|.+|+.|..
T Consensus 280 ~d~~kal~lGA~~v~ig~~~l~ 301 (368)
T 3vkj_A 280 LDAAKAIALGADIAGMALPVLK 301 (368)
T ss_dssp HHHHHHHHHTCSEEEECHHHHH
T ss_pred HHHHHHHHcCCCEEEEcHHHHH
Confidence 99888886 999999998763
No 148
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=96.86 E-value=0.00046 Score=59.62 Aligned_cols=64 Identities=16% Similarity=0.313 Sum_probs=52.9
Q ss_pred ccccEEEe---cCCCCCCCCCHHHHHHHHhcCCCCEEEecCC-ChHhHHHhhc--CCEEEEeceEeecCe
Q psy9039 185 FLSDGLII---TGNATGDPADVSQLMSVKNAVDLPILIGSGV-TSDNVEHYMT--ADALIIGSHFKQGGR 248 (251)
Q Consensus 185 ~~~D~v~V---TG~~~g~~~~~~~l~~vr~~~~~PV~vG~GI-~~~~v~~~~~--ADGvIVGS~~~~~g~ 248 (251)
.|+|-+.+ +|+..+.....+.++++.+.+.+|+-+|||| +.++++++++ ||=+++||+..++.+
T Consensus 43 ~gad~lhvvDld~a~~~~~~~~~~i~~i~~~~~~pl~vGGGIrs~e~~~~~l~~GadkVii~t~a~~~p~ 112 (243)
T 4gj1_A 43 AGAKELHLVDLTGAKDPSKRQFALIEKLAKEVSVNLQVGGGIRSKEEVKALLDCGVKRVVIGSMAIKDAT 112 (243)
T ss_dssp HTCCEEEEEEHHHHHCGGGCCHHHHHHHHHHCCSEEEEESSCCCHHHHHHHHHTTCSEEEECTTTTTCHH
T ss_pred CCCCEEEEEecCcccccchhHHHHHHHHHHhcCCCeEeccccccHHHHHHHHHcCCCEEEEccccccCCc
Confidence 47776654 5666666677899999999999999999999 6899999996 999999998877643
No 149
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=96.78 E-value=0.0012 Score=60.59 Aligned_cols=70 Identities=16% Similarity=0.216 Sum_probs=51.2
Q ss_pred HHHHHHhhhccccEEEecCCC-CC------------------CCCCHHHHHHHHhcC-CCCEEEecCC-ChHhHHHhhc-
Q psy9039 176 TETAKAASFFLSDGLIITGNA-TG------------------DPADVSQLMSVKNAV-DLPILIGSGV-TSDNVEHYMT- 233 (251)
Q Consensus 176 ~~~a~~a~~~~~D~v~VTG~~-~g------------------~~~~~~~l~~vr~~~-~~PV~vG~GI-~~~~v~~~~~- 233 (251)
.+.|+.+...|+|++.|+|.. +. ..+....+..++... ++||++-||| ++.++.+++.
T Consensus 220 ~e~A~~l~~aGad~I~V~g~GGt~~a~ie~~r~~~~~~~~~~g~pt~~~L~~v~~~~~~ipvia~GGI~~g~Dv~KaLal 299 (365)
T 3sr7_A 220 VKTIQTAIDLGVKTVDISGRGGTSFAYIENRRGGNRSYLNQWGQTTAQVLLNAQPLMDKVEILASGGIRHPLDIIKALVL 299 (365)
T ss_dssp HHHHHHHHHHTCCEEECCCBC--------------CGGGTTCSCBHHHHHHHHGGGTTTSEEEECSSCCSHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEeCCCCcccchhhccccccccccccccccHHHHHHHHHHhcCCCeEEEeCCCCCHHHHHHHHHc
Confidence 345666667799999998751 10 112235566666544 7999999999 7999888886
Q ss_pred -CCEEEEeceEee
Q psy9039 234 -ADALIIGSHFKQ 245 (251)
Q Consensus 234 -ADGvIVGS~~~~ 245 (251)
||+|.+||.|..
T Consensus 300 GAdaV~ig~~~l~ 312 (365)
T 3sr7_A 300 GAKAVGLSRTMLE 312 (365)
T ss_dssp TCSEEEESHHHHH
T ss_pred CCCEEEECHHHHH
Confidence 999999998864
No 150
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=96.74 E-value=0.0092 Score=51.96 Aligned_cols=59 Identities=15% Similarity=0.281 Sum_probs=45.0
Q ss_pred HHhhhccccEEEecCCCCCCCCCHHHHHHHHhcC-CCCEEEecCCChHhHHHhhc--CCEEE
Q psy9039 180 KAASFFLSDGLIITGNATGDPADVSQLMSVKNAV-DLPILIGSGVTSDNVEHYMT--ADALI 238 (251)
Q Consensus 180 ~~a~~~~~D~v~VTG~~~g~~~~~~~l~~vr~~~-~~PV~vG~GI~~~~v~~~~~--ADGvI 238 (251)
+.....|+|.+-.+|....-....+.|+++.+.. .+-|++|+||+++|+.+++. ++-+=
T Consensus 135 e~L~~lG~~rILTSG~~~~a~~g~~~L~~Lv~~a~~i~Im~GgGv~~~Ni~~l~~tGv~e~H 196 (256)
T 1twd_A 135 NNLAELGIARVLTSGQKSDALQGLSKIMELIAHRDAPIIMAGAGVRAENLHHFLDAGVLEVH 196 (256)
T ss_dssp HHHHHHTCCEEEECTTSSSTTTTHHHHHHHHTSSSCCEEEEESSCCTTTHHHHHHHTCSEEE
T ss_pred HHHHHcCCCEEECCCCCCCHHHHHHHHHHHHHhhCCcEEEecCCcCHHHHHHHHHcCCCeEe
Confidence 4444469999999998776666778888876644 67799999999999998873 54443
No 151
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=96.74 E-value=0.0014 Score=57.32 Aligned_cols=63 Identities=21% Similarity=0.261 Sum_probs=47.4
Q ss_pred HHHhhhccccEEEecCCCCCCCCCHHHHHHHHhcCCC-CEEEecCCChH-------hHHHhhc--CCEEEEeceEeec
Q psy9039 179 AKAASFFLSDGLIITGNATGDPADVSQLMSVKNAVDL-PILIGSGVTSD-------NVEHYMT--ADALIIGSHFKQG 246 (251)
Q Consensus 179 a~~a~~~~~D~v~VTG~~~g~~~~~~~l~~vr~~~~~-PV~vG~GI~~~-------~v~~~~~--ADGvIVGS~~~~~ 246 (251)
++.+...|+|.+.+. . +.+.+.++++++.++. ||++.|||+.+ ++.++++ |+|+++|+++.+.
T Consensus 165 ~~~a~~~GAD~vkt~-~----~~~~e~~~~~~~~~~~~pV~asGGi~~~~~~~~l~~i~~~~~aGA~GvsvgraI~~~ 237 (263)
T 1w8s_A 165 ARIALELGADAMKIK-Y----TGDPKTFSWAVKVAGKVPVLMSGGPKTKTEEDFLKQVEGVLEAGALGIAVGRNVWQR 237 (263)
T ss_dssp HHHHHHHTCSEEEEE-C----CSSHHHHHHHHHHTTTSCEEEECCSCCSSHHHHHHHHHHHHHTTCCEEEESHHHHTS
T ss_pred HHHHHHcCCCEEEEc-C----CCCHHHHHHHHHhCCCCeEEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEehhhcCC
Confidence 344445799998776 2 2367889999988877 99999999633 5555555 9999999988654
No 152
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=96.63 E-value=0.0061 Score=52.93 Aligned_cols=71 Identities=25% Similarity=0.145 Sum_probs=55.2
Q ss_pred ccHHHHHHHhhhccccEEEe-cCCCCCCCCCHHHHHHHHhcCCCCEEEecCC-ChHhHHHhhc--CCEEEEeceEe
Q psy9039 173 VDITETAKAASFFLSDGLII-TGNATGDPADVSQLMSVKNAVDLPILIGSGV-TSDNVEHYMT--ADALIIGSHFK 244 (251)
Q Consensus 173 ~~i~~~a~~a~~~~~D~v~V-TG~~~g~~~~~~~l~~vr~~~~~PV~vG~GI-~~~~v~~~~~--ADGvIVGS~~~ 244 (251)
....++|+..+..|++++-| |-.. -.....+.++.+|+.+++||+.+.+| ++.++.++.. ||++.+|++..
T Consensus 65 ~~p~~~A~~~~~~GA~~isvlt~~~-~f~G~~~~l~~i~~~v~lPvl~kdfI~d~~qi~~a~~~GAD~VlL~~~~l 139 (254)
T 1vc4_A 65 VDPVEAALAYARGGARAVSVLTEPH-RFGGSLLDLKRVREAVDLPLLRKDFVVDPFMLEEARAFGASAALLIVALL 139 (254)
T ss_dssp CCHHHHHHHHHHTTCSEEEEECCCS-SSCCCHHHHHHHHHHCCSCEEEESCCCSHHHHHHHHHTTCSEEEEEHHHH
T ss_pred CCHHHHHHHHHHcCCCEEEEecchh-hhccCHHHHHHHHHhcCCCEEECCcCCCHHHHHHHHHcCCCEEEECccch
Confidence 45677777777789999865 4332 23346788999999999999999999 5778888775 99999998754
No 153
>1vkf_A Glycerol uptake operon antiterminator-related Pro; struc genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: CIT; 1.65A {Thermotoga maritima} SCOP: c.1.29.1
Probab=96.59 E-value=0.0034 Score=52.33 Aligned_cols=127 Identities=13% Similarity=0.088 Sum_probs=77.7
Q ss_pred HHHHHHHHHHhCCCCccEEEEEeeCChH--HHHHHHHHcCccceecccccccccCCCceeecCcchhHHHHHhcCCCcch
Q psy9039 78 MTRLCAEIRKVLPPSVPVGVQILSGCNK--AALATAQAAGLDFIRAESFVFGHMADEGLMNAQAGPLLRYRKQIGADNVL 155 (251)
Q Consensus 78 ~~~~i~~vr~~~~~~~P~Gvn~~~N~~~--~~~~ia~a~g~~Fir~~~~~~~~~~~~Gli~~da~e~~~~r~~l~~~~i~ 155 (251)
+..+++++|+. . .|+-|+.=.-... .+.++ .|++ ....+|++... ....+..+++|...|+
T Consensus 45 L~~iv~~ik~~-g--K~vivh~DlI~GLs~d~~ai------~fL~-------~~~pdGIIsTk-~~~i~~Akk~GL~tIq 107 (188)
T 1vkf_A 45 LKFHLKILKDR-G--KTVFVDMDFVNGLGEGEEAI------LFVK-------KAGADGIITIK-PKNYVVAKKNGIPAVL 107 (188)
T ss_dssp HHHHHHHHHHT-T--CEEEEEGGGEETCCSSHHHH------HHHH-------HHTCSEEEESC-HHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHHC-C--CeEEEecCcccccCCCHHHH------HHHH-------hcCCCEEEcCc-HHHHHHHHHcCCEEee
Confidence 77888999887 5 5766653111111 22333 5651 24577877766 4455667777876554
Q ss_pred hhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCCCCCCCC--HHHHHHHHhcCCCCEEEecCC-ChHhHHHhh
Q psy9039 156 VFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNATGDPAD--VSQLMSVKNAVDLPILIGSGV-TSDNVEHYM 232 (251)
Q Consensus 156 i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~g~~~~--~~~l~~vr~~~~~PV~vG~GI-~~~~v~~~~ 232 (251)
-+. ..+...++...+......+|++-+- +.. .+.++++ +++|+++||+| |+|++.+ +
T Consensus 108 R~F----------liDs~al~~~~~~I~~~kPD~iEiL------Pg~v~p~~I~~v---~~~PiIaGGlI~t~edv~~-l 167 (188)
T 1vkf_A 108 RFF----------ALDSKAVERGIEQIETLGVDVVEVL------PGAVAPKVARKI---PGRTVIAAGLVETEEEARE-I 167 (188)
T ss_dssp EEE----------CCSHHHHHHHHHHHHHHTCSEEEEE------SGGGHHHHHTTS---TTSEEEEESCCCSHHHHHH-H
T ss_pred EEE----------EEEeHHHhhhhhhccccCCCeEeec------CCCchHHHHHHh---cCCCEEEECCcCCHHHHHH-H
Confidence 431 1222334444444444567775443 222 3555555 78999999999 7999999 7
Q ss_pred c--CCEEEEec
Q psy9039 233 T--ADALIIGS 241 (251)
Q Consensus 233 ~--ADGvIVGS 241 (251)
+ ||++..|+
T Consensus 168 ~aGA~aIsTs~ 178 (188)
T 1vkf_A 168 LKHVSAISTSS 178 (188)
T ss_dssp TTTSSEEEECC
T ss_pred HCCCeEEEeCC
Confidence 5 99999886
No 154
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=96.54 E-value=0.0023 Score=60.87 Aligned_cols=70 Identities=17% Similarity=0.204 Sum_probs=50.0
Q ss_pred cHHHHHHHhhhccccEEEecCCCCCC-----------CCCHHHHHHHHhcC---------CCCEEEecCC-ChHhHHHhh
Q psy9039 174 DITETAKAASFFLSDGLIITGNATGD-----------PADVSQLMSVKNAV---------DLPILIGSGV-TSDNVEHYM 232 (251)
Q Consensus 174 ~i~~~a~~a~~~~~D~v~VTG~~~g~-----------~~~~~~l~~vr~~~---------~~PV~vG~GI-~~~~v~~~~ 232 (251)
...+.++.+...|+|++.| |...|. .+....+.++.+.+ ++||++.||| ++.++.+++
T Consensus 293 ~t~~~a~~l~~aGad~I~V-g~~~g~~~~~r~~~~~g~p~~~~l~~v~~~~~~~~~~~~~~ipvia~GGi~~~~di~kAl 371 (503)
T 1me8_A 293 VDGEGFRYLADAGADFIKI-GIGGGSICITREQKGIGRGQATAVIDVVAERNKYFEETGIYIPVCSDGGIVYDYHMTLAL 371 (503)
T ss_dssp CSHHHHHHHHHHTCSEEEE-CSSCSTTCCSTTTTCCCCCHHHHHHHHHHHHHHHHHHHSEECCEEEESCCCSHHHHHHHH
T ss_pred cCHHHHHHHHHhCCCeEEe-cccCCcCcccccccCCCCchHHHHHHHHHHHHHHhhhcCCCceEEEeCCCCCHHHHHHHH
Confidence 3344556666679999988 654321 13345555554432 6999999999 799988888
Q ss_pred c--CCEEEEeceEe
Q psy9039 233 T--ADALIIGSHFK 244 (251)
Q Consensus 233 ~--ADGvIVGS~~~ 244 (251)
. ||+|.+||.|.
T Consensus 372 alGA~~V~iG~~~~ 385 (503)
T 1me8_A 372 AMGADFIMLGRYFA 385 (503)
T ss_dssp HTTCSEEEESHHHH
T ss_pred HcCCCEEEECchhh
Confidence 6 99999999984
No 155
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} SCOP: c.1.2.3 PDB: 3exs_A* 3ext_A
Probab=96.53 E-value=0.0033 Score=53.46 Aligned_cols=48 Identities=17% Similarity=0.329 Sum_probs=38.3
Q ss_pred CCCCCHHHHHHHHhcC--CCCEEEecCCChHhHHHhhc--CCEEEEeceEee
Q psy9039 198 GDPADVSQLMSVKNAV--DLPILIGSGVTSDNVEHYMT--ADALIIGSHFKQ 245 (251)
Q Consensus 198 g~~~~~~~l~~vr~~~--~~PV~vG~GI~~~~v~~~~~--ADGvIVGS~~~~ 245 (251)
|.....+.++++|+.+ +.|+.+-+||++++++++.. ||.++|||++-+
T Consensus 150 Gvv~s~~e~~~ir~~~~~~~~i~v~gGI~~~~~~~~~~aGad~~VvG~~I~~ 201 (221)
T 3exr_A 150 GETWGEKDLNKVKKLIEMGFRVSVTGGLSVDTLKLFEGVDVFTFIAGRGITE 201 (221)
T ss_dssp TCCCCHHHHHHHHHHHHHTCEEEEESSCCGGGGGGGTTCCCSEEEECHHHHT
T ss_pred ccccCHHHHHHHHHhhcCCceEEEECCCCHHHHHHHHHCCCCEEEECchhhC
Confidence 3333456777777765 68899999999999998886 999999998754
No 156
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=96.49 E-value=0.0031 Score=59.35 Aligned_cols=67 Identities=19% Similarity=0.270 Sum_probs=48.3
Q ss_pred HHHHHhhhccccEEEecCCCC----------C-CCCCHHHHHHHHh---cCCCCEEEecCC-ChHhHHHhhc--CCEEEE
Q psy9039 177 ETAKAASFFLSDGLIITGNAT----------G-DPADVSQLMSVKN---AVDLPILIGSGV-TSDNVEHYMT--ADALII 239 (251)
Q Consensus 177 ~~a~~a~~~~~D~v~VTG~~~----------g-~~~~~~~l~~vr~---~~~~PV~vG~GI-~~~~v~~~~~--ADGvIV 239 (251)
+.++.+...|+|++.|+ ... + ..+..+.+.++.+ ..++||++.||| +++++.+++. ||+|++
T Consensus 286 ~~a~~~~~~Gad~I~vg-~g~g~~~~tr~~~~~~~p~~~~l~~~~~~~~~~~ipvia~GGi~~~~di~kal~~GA~~v~v 364 (491)
T 1zfj_A 286 EGARALYDAGVDVVKVG-IGPGSICTTRVVAGVGVPQVTAIYDAAAVAREYGKTIIADGGIKYSGDIVKALAAGGNAVML 364 (491)
T ss_dssp HHHHHHHHTTCSEEEEC-SSCCTTBCHHHHTCCCCCHHHHHHHHHHHHHHTTCEEEEESCCCSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHcCCCEEEEC-ccCCcceEEeeecCCCCCcHHHHHHHHHHHhhcCCCEEeeCCCCCHHHHHHHHHcCCcceee
Confidence 44555555799999773 211 1 1234455665554 358999999999 7999998886 999999
Q ss_pred eceEe
Q psy9039 240 GSHFK 244 (251)
Q Consensus 240 GS~~~ 244 (251)
||+|.
T Consensus 365 G~~~~ 369 (491)
T 1zfj_A 365 GSMFA 369 (491)
T ss_dssp STTTT
T ss_pred CHHhh
Confidence 99996
No 157
>4a3u_A NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET: FMN; 1.70A {Zymomonas mobilis}
Probab=96.47 E-value=0.01 Score=53.90 Aligned_cols=64 Identities=14% Similarity=0.164 Sum_probs=45.2
Q ss_pred ccccEEEecCCCCCC----CCCHHHHHHHHhcCCCCEEEecCCChHhHHHhhc---CCEEEEeceEeecCe
Q psy9039 185 FLSDGLIITGNATGD----PADVSQLMSVKNAVDLPILIGSGVTSDNVEHYMT---ADALIIGSHFKQGGR 248 (251)
Q Consensus 185 ~~~D~v~VTG~~~g~----~~~~~~l~~vr~~~~~PV~vG~GI~~~~v~~~~~---ADGvIVGS~~~~~g~ 248 (251)
.++|.+.+++..... .......+++|+.+..||++|++.+++.+.++++ ||.|-+|-.|+.|=+
T Consensus 253 ~~~~~i~~~~~~~~~~~~~~~~~~~a~~ik~~~~~~v~~~g~~~~~~ae~~l~~G~aD~V~~gR~~ladPd 323 (358)
T 4a3u_A 253 LDIAFLGMREGAVDGTFGKTDQPKLSPEIRKVFKPPLVLNQDYTFETAQAALDSGVADAISFGRPFIGNPD 323 (358)
T ss_dssp HTCSEEEEECCBTTCSSSBCSSCCCHHHHHHHCCSCEEEESSCCHHHHHHHHHHTSCSEEEESHHHHHCTT
T ss_pred cCccccccccccccCcccccccHHHHHHHHHhcCCcEEEeCCCCHHHHHHHHHcCCceEeHhhHHHHhChh
Confidence 467777665432211 1112345677888889999988889999999984 999999988877643
No 158
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=96.23 E-value=0.0064 Score=58.50 Aligned_cols=70 Identities=19% Similarity=0.217 Sum_probs=49.4
Q ss_pred HHHHHHhhhccccEEEe---cCCCCCC---CCCHHHHHHHHhcCCCCEEEecCC-Ch-----------HhHHHhhc--CC
Q psy9039 176 TETAKAASFFLSDGLII---TGNATGD---PADVSQLMSVKNAVDLPILIGSGV-TS-----------DNVEHYMT--AD 235 (251)
Q Consensus 176 ~~~a~~a~~~~~D~v~V---TG~~~g~---~~~~~~l~~vr~~~~~PV~vG~GI-~~-----------~~v~~~~~--AD 235 (251)
.++|+.....|+|.+.+ +|.+.+. ....+.++++++.+++||.+|||| +. +++.+++. ||
T Consensus 283 ~~~A~~~~~~Ga~~l~~~dl~~~~~~~~~~~~~~~~i~~i~~~~~ipi~vgGGIr~~~d~~~~~~~~~~~a~~~l~aGad 362 (555)
T 1jvn_A 283 VQLAQKYYQQGADEVTFLNITSFRDCPLKDTPMLEVLKQAAKTVFVPLTVGGGIKDIVDVDGTKIPALEVASLYFRSGAD 362 (555)
T ss_dssp HHHHHHHHHTTCSEEEEEEEC---CCCGGGCHHHHHHHHHTTTCCSCEEEESSCSCEECTTCCEECHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHcCCCEEEEEeCCccccccCCCchHHHHHHHHHhhCCCcEEEeCccccchhcccccchHHHHHHHHHHcCCC
Confidence 34455444458888755 4544332 223578889988899999999999 55 56999986 99
Q ss_pred EEEEeceEee
Q psy9039 236 ALIIGSHFKQ 245 (251)
Q Consensus 236 GvIVGS~~~~ 245 (251)
-+++||...+
T Consensus 363 ~V~igt~~~~ 372 (555)
T 1jvn_A 363 KVSIGTDAVY 372 (555)
T ss_dssp EEEECHHHHH
T ss_pred EEEECCHHhh
Confidence 9999998754
No 159
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=96.09 E-value=0.0047 Score=54.24 Aligned_cols=74 Identities=16% Similarity=0.083 Sum_probs=52.6
Q ss_pred cccHHHHHHHhhhccccEEEecCCCCCCCCCHHHHHHHHhcCCCCEEEecCC-ChHhHHHhhc--CCEEEEeceEee
Q psy9039 172 DVDITETAKAASFFLSDGLIITGNATGDPADVSQLMSVKNAVDLPILIGSGV-TSDNVEHYMT--ADALIIGSHFKQ 245 (251)
Q Consensus 172 ~~~i~~~a~~a~~~~~D~v~VTG~~~g~~~~~~~l~~vr~~~~~PV~vG~GI-~~~~v~~~~~--ADGvIVGS~~~~ 245 (251)
+....++|+..+..|++++-|.=...-.....+.++++|+.+++||+....| ++.++.++.. |||+++|.+...
T Consensus 71 ~~~p~~~A~~y~~~GA~~isvltd~~~f~Gs~~~l~~ir~~v~lPvl~kdfiid~~qv~~A~~~GAD~VlLi~a~l~ 147 (272)
T 3qja_A 71 IADPAKLAQAYQDGGARIVSVVTEQRRFQGSLDDLDAVRASVSIPVLRKDFVVQPYQIHEARAHGADMLLLIVAALE 147 (272)
T ss_dssp --CHHHHHHHHHHTTCSEEEEECCGGGHHHHHHHHHHHHHHCSSCEEEESCCCSHHHHHHHHHTTCSEEEEEGGGSC
T ss_pred CCCHHHHHHHHHHcCCCEEEEecChhhcCCCHHHHHHHHHhCCCCEEECccccCHHHHHHHHHcCCCEEEEecccCC
Confidence 4456777777666799998653111111123678999999999999998766 8888988885 999999876443
No 160
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=96.04 E-value=0.019 Score=50.51 Aligned_cols=89 Identities=22% Similarity=0.150 Sum_probs=63.7
Q ss_pred chhhhhhHhhccCCC---CCCcccHHHHHHHhhhccccEEEe-cCCCCCCCCCHHHHHHHHhcCCCCEEEecCC-ChHhH
Q psy9039 154 VLVFTDIKKKHSSHA---ITADVDITETAKAASFFLSDGLII-TGNATGDPADVSQLMSVKNAVDLPILIGSGV-TSDNV 228 (251)
Q Consensus 154 i~i~a~v~~k~~~~~---~~~~~~i~~~a~~a~~~~~D~v~V-TG~~~g~~~~~~~l~~vr~~~~~PV~vG~GI-~~~~v 228 (251)
..+++.+.+.. |. +..+....++|+..+..|++++-| |=.. -...+.+.++++|+.+++||+...+| ++.++
T Consensus 59 ~~vIaE~KraS--PSkG~i~~~~dp~~~A~~y~~~GA~~IsVltd~~-~f~Gs~~~L~~ir~~v~lPVl~Kdfi~d~~qi 135 (272)
T 3tsm_A 59 FALIAEIKKAS--PSKGLIRPDFDPPALAKAYEEGGAACLSVLTDTP-SFQGAPEFLTAARQACSLPALRKDFLFDPYQV 135 (272)
T ss_dssp CEEEEEECSEE--TTTEESCSSCCHHHHHHHHHHTTCSEEEEECCST-TTCCCHHHHHHHHHTSSSCEEEESCCCSTHHH
T ss_pred ceEEEEeccCC--CCCCccCCCCCHHHHHHHHHHCCCCEEEEecccc-ccCCCHHHHHHHHHhcCCCEEECCccCCHHHH
Confidence 45666554331 21 234456778888777789999844 5322 22346789999999999999999888 68899
Q ss_pred HHhhc--CCEEEEeceEee
Q psy9039 229 EHYMT--ADALIIGSHFKQ 245 (251)
Q Consensus 229 ~~~~~--ADGvIVGS~~~~ 245 (251)
.++.. ||++.++.+...
T Consensus 136 ~ea~~~GAD~VlLi~a~L~ 154 (272)
T 3tsm_A 136 YEARSWGADCILIIMASVD 154 (272)
T ss_dssp HHHHHTTCSEEEEETTTSC
T ss_pred HHHHHcCCCEEEEcccccC
Confidence 88875 999999987654
No 161
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=95.92 E-value=0.01 Score=52.95 Aligned_cols=71 Identities=21% Similarity=0.288 Sum_probs=47.6
Q ss_pred HHHHHHHhhhccccEEEecCCCCCCCCCHHHHHHHHhc----CCCC-EEEecCCCh----HhHHHhhc--CCEEEEeceE
Q psy9039 175 ITETAKAASFFLSDGLIITGNATGDPADVSQLMSVKNA----VDLP-ILIGSGVTS----DNVEHYMT--ADALIIGSHF 243 (251)
Q Consensus 175 i~~~a~~a~~~~~D~v~VTG~~~g~~~~~~~l~~vr~~----~~~P-V~vG~GI~~----~~v~~~~~--ADGvIVGS~~ 243 (251)
+.+.++.+...|+|.+.+--...+ ..+.+.+.++.+. +.+| |++.||+++ ++++.++. |+|++||+++
T Consensus 179 v~~aa~~a~~lGaD~iKv~~~~~~-~g~~~~~~~vv~~~~~~~~~P~Vv~aGG~~~~~~~~~~~~a~~aGa~Gv~vGRaI 257 (304)
T 1to3_A 179 IIDAAKELGDSGADLYKVEMPLYG-KGARSDLLTASQRLNGHINMPWVILSSGVDEKLFPRAVRVAMEAGASGFLAGRAV 257 (304)
T ss_dssp HHHHHHHHTTSSCSEEEECCGGGG-CSCHHHHHHHHHHHHHTCCSCEEECCTTSCTTTHHHHHHHHHHTTCCEEEESHHH
T ss_pred HHHHHHHHHHcCCCEEEeCCCcCC-CCCHHHHHHHHHhccccCCCCeEEEecCCCHHHHHHHHHHHHHcCCeEEEEehHH
Confidence 333344444579999866332111 1145555555555 8899 999999976 56888875 9999999987
Q ss_pred eec
Q psy9039 244 KQG 246 (251)
Q Consensus 244 ~~~ 246 (251)
-+.
T Consensus 258 ~q~ 260 (304)
T 1to3_A 258 WSS 260 (304)
T ss_dssp HGG
T ss_pred hCc
Confidence 644
No 162
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=95.91 E-value=0.012 Score=51.98 Aligned_cols=70 Identities=20% Similarity=0.235 Sum_probs=41.9
Q ss_pred HHHHHHhhhccccEEEe-----cCCCCCC--CCCH----HHHH----HHHhc-CCCCEEEec-CC-ChHhHHHhhc----
Q psy9039 176 TETAKAASFFLSDGLII-----TGNATGD--PADV----SQLM----SVKNA-VDLPILIGS-GV-TSDNVEHYMT---- 233 (251)
Q Consensus 176 ~~~a~~a~~~~~D~v~V-----TG~~~g~--~~~~----~~l~----~vr~~-~~~PV~vG~-GI-~~~~v~~~~~---- 233 (251)
.+.++.....++|.+++ ||..-|. ..+. +.++ .+|+. .++-|++++ || +++++..+++
T Consensus 173 ~eeA~amA~agpDiI~~h~glT~gglIG~~~avs~~~~~e~i~~i~~a~~~vnpdvivLc~gGpIstpeDv~~~l~~t~G 252 (286)
T 2p10_A 173 PEDAVAMAKAGADILVCHMGLTTGGAIGARSGKSMDDCVSLINECIEAARTIRDDIIILSHGGPIANPEDARFILDSCQG 252 (286)
T ss_dssp HHHHHHHHHHTCSEEEEECSCC---------CCCHHHHHHHHHHHHHHHHHHCSCCEEEEESTTCCSHHHHHHHHHHCTT
T ss_pred HHHHHHHHHcCCCEEEECCCCCCCCcccCCCcccHHHhHHHHHHHHHHHHHhCCCcEEEecCCCCCCHHHHHHHHhcCCC
Confidence 34445444569999876 2322221 1122 2333 33333 267788877 89 6999998884
Q ss_pred CCEEEEeceEee
Q psy9039 234 ADALIIGSHFKQ 245 (251)
Q Consensus 234 ADGvIVGS~~~~ 245 (251)
+||++.+|++.+
T Consensus 253 ~~G~~gASsier 264 (286)
T 2p10_A 253 CHGFYGASSMER 264 (286)
T ss_dssp CCEEEESHHHHH
T ss_pred ccEEEeehhhhc
Confidence 899999998764
No 163
>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 2vdc_A*
Probab=95.89 E-value=0.0072 Score=63.84 Aligned_cols=72 Identities=19% Similarity=0.195 Sum_probs=53.7
Q ss_pred cHHHHHHHhhhccccEEEecCCCCCC------------CCCHHHHHHHHhcC-------CCCEEEecCC-ChHhHHHhhc
Q psy9039 174 DITETAKAASFFLSDGLIITGNATGD------------PADVSQLMSVKNAV-------DLPILIGSGV-TSDNVEHYMT 233 (251)
Q Consensus 174 ~i~~~a~~a~~~~~D~v~VTG~~~g~------------~~~~~~l~~vr~~~-------~~PV~vG~GI-~~~~v~~~~~ 233 (251)
.+...|+.+...|+|++.|+|...|. .+....|.++++.. ++||++.||| |..++.+++.
T Consensus 1005 gi~~~A~~a~~AGAD~IvVsG~eGGTgasp~~~~~~~G~Pt~~aL~ev~~al~~~glr~~VpVIAdGGIrtG~DVakALa 1084 (1479)
T 1ea0_A 1005 GIGTIAAGVAKANADIILISGNSGGTGASPQTSIKFAGLPWEMGLSEVHQVLTLNRLRHRVRLRTDGGLKTGRDIVIAAM 1084 (1479)
T ss_dssp THHHHHHHHHHTTCSEEEEECTTCCCSSEETTHHHHSCCCHHHHHHHHHHHHHTTTCTTTSEEEEESSCCSHHHHHHHHH
T ss_pred ChHHHHHHHHHcCCcEEEEcCCCCCCCCCchhhhcCCchhHHHHHHHHHHHHHHcCCCCCceEEEECCCCCHHHHHHHHH
Confidence 34556666666799999999985442 12234566666542 6999999999 7899888885
Q ss_pred --CCEEEEeceEee
Q psy9039 234 --ADALIIGSHFKQ 245 (251)
Q Consensus 234 --ADGvIVGS~~~~ 245 (251)
||+|.+||+|..
T Consensus 1085 LGAdaV~iGTafL~ 1098 (1479)
T 1ea0_A 1085 LGAEEFGIGTASLI 1098 (1479)
T ss_dssp TTCSEEECCHHHHH
T ss_pred cCCCeeeEcHHHHH
Confidence 999999999854
No 164
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=95.85 E-value=0.0076 Score=53.61 Aligned_cols=64 Identities=13% Similarity=0.134 Sum_probs=46.1
Q ss_pred HHHHHHHhhhccccEEEecCCCCCCCCCHHHHHHHHhcCCCCEEEecCCC-h-----HhHHHhhc--CCEEEEeceEee
Q psy9039 175 ITETAKAASFFLSDGLIITGNATGDPADVSQLMSVKNAVDLPILIGSGVT-S-----DNVEHYMT--ADALIIGSHFKQ 245 (251)
Q Consensus 175 i~~~a~~a~~~~~D~v~VTG~~~g~~~~~~~l~~vr~~~~~PV~vG~GI~-~-----~~v~~~~~--ADGvIVGS~~~~ 245 (251)
+...++.|...|+|.+-++= ++ +.++++++.+++||++-||++ + +++++++. |+|++||+.+.+
T Consensus 191 i~~aariA~elGAD~VKt~~--t~-----e~~~~vv~~~~vPVv~~GG~~~~~~~~l~~v~~ai~aGA~Gv~vGRnI~q 262 (295)
T 3glc_A 191 FSLATRIAAEMGAQIIKTYY--VE-----KGFERIVAGCPVPIVIAGGKKLPEREALEMCWQAIDQGASGVDMGRNIFQ 262 (295)
T ss_dssp HHHHHHHHHHTTCSEEEEEC--CT-----TTHHHHHHTCSSCEEEECCSCCCHHHHHHHHHHHHHTTCSEEEESHHHHT
T ss_pred HHHHHHHHHHhCCCEEEeCC--CH-----HHHHHHHHhCCCcEEEEECCCCCHHHHHHHHHHHHHhCCeEEEeHHHHhc
Confidence 34445555567999987762 11 236778888899999999995 3 35666665 999999998754
No 165
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=95.83 E-value=0.0029 Score=59.79 Aligned_cols=59 Identities=19% Similarity=0.389 Sum_probs=42.8
Q ss_pred cccEEEecCCCCCC-----------CCC---HHHHHHHHhcCCCCEEEecCC-ChHhHHHhhc--CCEEEEeceEee
Q psy9039 186 LSDGLIITGNATGD-----------PAD---VSQLMSVKNAVDLPILIGSGV-TSDNVEHYMT--ADALIIGSHFKQ 245 (251)
Q Consensus 186 ~~D~v~VTG~~~g~-----------~~~---~~~l~~vr~~~~~PV~vG~GI-~~~~v~~~~~--ADGvIVGS~~~~ 245 (251)
|+|++.| |...+. .+. +..++++.+..++||++.||| +..++.+++. ||+|.+||.|..
T Consensus 287 G~d~v~v-g~g~g~~~~~r~~~~~g~~~~~~l~~~~~~~~~~~vpVia~GGi~~~~di~kalalGA~~v~~g~~~~~ 362 (486)
T 2cu0_A 287 FADAVKV-GIGPGSICTTRIVAGVGVPQITAVAMVADRAQEYGLYVIADGGIRYSGDIVKAIAAGADAVMLGNLLAG 362 (486)
T ss_dssp TSSEEEE-CSSCSTTBCHHHHTCCCCCHHHHHHHHHHHHHHHTCEEEEESCCCSHHHHHHHHHTTCSEEEESTTTTT
T ss_pred CCCeEEE-eeeeccceeeeEEeecCcchHHHHHHHHHHHHHcCCcEEecCCCCCHHHHHHHHHcCCCceeeChhhhc
Confidence 9999988 432211 111 234455555568999999999 7888888885 999999999873
No 166
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=95.82 E-value=0.021 Score=48.53 Aligned_cols=62 Identities=13% Similarity=0.180 Sum_probs=46.0
Q ss_pred cHHHHHHHhhhccccEEEec-CCCCCCCCCHHHHHHHHhcC--CCCEEEecCC-ChHhHHHhhc--CCE
Q psy9039 174 DITETAKAASFFLSDGLIIT-GNATGDPADVSQLMSVKNAV--DLPILIGSGV-TSDNVEHYMT--ADA 236 (251)
Q Consensus 174 ~i~~~a~~a~~~~~D~v~VT-G~~~g~~~~~~~l~~vr~~~--~~PV~vG~GI-~~~~v~~~~~--ADG 236 (251)
.+.+.++.+...|+|++-++ |..+| ..+++.++.+++.+ ++||++.||| |++++.+++. ||-
T Consensus 133 ~~~~~a~~a~eaGad~I~tstg~~~g-ga~~~~i~~v~~~v~~~ipVia~GGI~t~~da~~~l~aGA~~ 200 (225)
T 1mzh_A 133 EIKKAVEICIEAGADFIKTSTGFAPR-GTTLEEVRLIKSSAKGRIKVKASGGIRDLETAISMIEAGADR 200 (225)
T ss_dssp HHHHHHHHHHHHTCSEEECCCSCSSS-CCCHHHHHHHHHHHTTSSEEEEESSCCSHHHHHHHHHTTCSE
T ss_pred HHHHHHHHHHHhCCCEEEECCCCCCC-CCCHHHHHHHHHHhCCCCcEEEECCCCCHHHHHHHHHhCchH
Confidence 35566666666799999433 33222 24678888888876 7999999999 7899999885 994
No 167
>1ofd_A Ferredoxin-dependent glutamate synthase 2; oxidoreductase, complex enzyme, substrate channeling, amidotransferase, flavoprotein, iron-sulphur; HET: FMN AKG; 2.00A {Synechocystis SP} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 1llz_A* 1lm1_A* 1llw_A* 1ofe_A*
Probab=95.81 E-value=0.0078 Score=63.73 Aligned_cols=72 Identities=18% Similarity=0.107 Sum_probs=53.3
Q ss_pred cHHHHHHHhhhccccEEEecCCCCCC------------CCCHHHHHHHHhcC-------CCCEEEecCC-ChHhHHHhhc
Q psy9039 174 DITETAKAASFFLSDGLIITGNATGD------------PADVSQLMSVKNAV-------DLPILIGSGV-TSDNVEHYMT 233 (251)
Q Consensus 174 ~i~~~a~~a~~~~~D~v~VTG~~~g~------------~~~~~~l~~vr~~~-------~~PV~vG~GI-~~~~v~~~~~ 233 (251)
.+...|+.+...|+|++.|+|...|. .+....|.++++.. ++||++.||| |..++.+++.
T Consensus 1040 gi~~~A~~a~kAGAD~IvVsG~eGGTgasp~~~~~~~GlPt~~aL~ev~~al~~~glr~~IpVIAdGGIrtG~DVakALa 1119 (1520)
T 1ofd_A 1040 GIGTIAAGVAKANADIIQISGHDGGTGASPLSSIKHAGSPWELGVTEVHRVLMENQLRDRVLLRADGGLKTGWDVVMAAL 1119 (1520)
T ss_dssp THHHHHHHHHHTTCSEEEEECTTCCCSSEEHHHHHHBCCCHHHHHHHHHHHHHHTTCGGGCEEEEESSCCSHHHHHHHHH
T ss_pred ChHHHHHHHHHcCCCEEEEeCCCCccCCCcchhhcCCchhHHHHHHHHHHHHHhcCCCCCceEEEECCCCCHHHHHHHHH
Confidence 34556666666799999999986432 12235566665532 6999999999 7899888885
Q ss_pred --CCEEEEeceEee
Q psy9039 234 --ADALIIGSHFKQ 245 (251)
Q Consensus 234 --ADGvIVGS~~~~ 245 (251)
||+|.+||+|..
T Consensus 1120 LGAdaV~iGTafL~ 1133 (1520)
T 1ofd_A 1120 MGAEEYGFGSIAMI 1133 (1520)
T ss_dssp TTCSEEECSHHHHH
T ss_pred cCCCeeEEcHHHHH
Confidence 999999999854
No 168
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=95.73 E-value=0.045 Score=52.36 Aligned_cols=39 Identities=13% Similarity=0.400 Sum_probs=30.9
Q ss_pred HHHHHhcCCCCEEEecCC-ChHhHHHhhc--CCEEEEeceEe
Q psy9039 206 LMSVKNAVDLPILIGSGV-TSDNVEHYMT--ADALIIGSHFK 244 (251)
Q Consensus 206 l~~vr~~~~~PV~vG~GI-~~~~v~~~~~--ADGvIVGS~~~ 244 (251)
..+..+...+|||+=||| ++.++.+.+. ||.|.+||.|-
T Consensus 376 ~a~~a~~~~vpvIADGGI~~sGDi~KAlaaGAd~VMlGsllA 417 (556)
T 4af0_A 376 VAEFASRFGIPCIADGGIGNIGHIAKALALGASAVMMGGLLA 417 (556)
T ss_dssp HHHHHGGGTCCEEEESCCCSHHHHHHHHHTTCSEEEESTTTT
T ss_pred HHHHHHHcCCCEEecCCcCcchHHHHHhhcCCCEEEEchhhc
Confidence 334444457999999999 6888888885 99999999773
No 169
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=95.70 E-value=0.022 Score=52.13 Aligned_cols=67 Identities=22% Similarity=0.308 Sum_probs=46.5
Q ss_pred HHHHHHHhhhccccEEEecCCC----CCCCC-CHHHHHHHHhcCCCCEEEecCCChHhHHHhhc--CCEEEEec
Q psy9039 175 ITETAKAASFFLSDGLIITGNA----TGDPA-DVSQLMSVKNAVDLPILIGSGVTSDNVEHYMT--ADALIIGS 241 (251)
Q Consensus 175 i~~~a~~a~~~~~D~v~VTG~~----~g~~~-~~~~l~~vr~~~~~PV~vG~GI~~~~v~~~~~--ADGvIVGS 241 (251)
..+.++.....++|.+.+.+.. ...+. .+..+.++++.+++||++|+..|++.+..+.+ ||+++||+
T Consensus 167 ~~e~a~~~~~agad~i~i~~~~~~~~~~~~~~~~~~i~~l~~~~~~pvi~ggi~t~e~a~~~~~~Gad~i~vg~ 240 (393)
T 2qr6_A 167 VREIAPIVIKAGADLLVIQGTLISAEHVNTGGEALNLKEFIGSLDVPVIAGGVNDYTTALHMMRTGAVGIIVGG 240 (393)
T ss_dssp HHHHHHHHHHTTCSEEEEECSSCCSSCCCC-----CHHHHHHHCSSCEEEECCCSHHHHHHHHTTTCSEEEESC
T ss_pred HHHHHHHHHHCCCCEEEEeCCccccccCCCcccHHHHHHHHHhcCCCEEECCcCCHHHHHHHHHcCCCEEEECC
Confidence 3444444444689999887643 11121 44568889988999999976669999998886 99999976
No 170
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=95.49 E-value=0.064 Score=47.25 Aligned_cols=98 Identities=14% Similarity=0.087 Sum_probs=63.1
Q ss_pred HHHHhhCCCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeCChHHHHHHHHHcC
Q psy9039 36 AEIRKVLPPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQILSGCNKAALATAQAAG 115 (251)
Q Consensus 36 ~~a~~~a~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~~~~~~ia~a~g 115 (251)
+.+++.++.+++.|+ |.|-|-=+-.-|.+.++. ..+=.+.+..+++.+++.++ +|+.+.++.. ..+..|...|
T Consensus 38 ~~a~~~a~~~v~~GA-diIDIGgestrPga~~v~-~~eE~~rv~pvi~~l~~~~~--~piSIDT~~~---~va~aAl~aG 110 (282)
T 1aj0_A 38 IDAVKHANLMINAGA-TIIDVGGESTRPGAAEVS-VEEELQRVIPVVEAIAQRFE--VWISVDTSKP---EVIRESAKVG 110 (282)
T ss_dssp HHHHHHHHHHHHHTC-SEEEEESSCCSTTCCCCC-HHHHHHHHHHHHHHHHHHCC--CEEEEECCCH---HHHHHHHHTT
T ss_pred HHHHHHHHHHHHCCC-CEEEECCCcCCCCCCcCC-HHHHHHHHHHHHHHHHhhcC--CeEEEeCCCH---HHHHHHHHcC
Confidence 334444456778899 999874444457766642 23445556778899988877 7999999863 3345555568
Q ss_pred ccceecccccccccCCCceeecCcchhHHHHHhcCCC
Q psy9039 116 LDFIRAESFVFGHMADEGLMNAQAGPLLRYRKQIGAD 152 (251)
Q Consensus 116 ~~Fir~~~~~~~~~~~~Gli~~da~e~~~~r~~l~~~ 152 (251)
++.+-. ..|. ...+..+..+++++.
T Consensus 111 a~iINd---------vsg~---~d~~~~~~~a~~~~~ 135 (282)
T 1aj0_A 111 AHIIND---------IRSL---SEPGALEAAAETGLP 135 (282)
T ss_dssp CCEEEE---------TTTT---CSTTHHHHHHHHTCC
T ss_pred CCEEEE---------CCCC---CCHHHHHHHHHhCCe
Confidence 888774 2222 223567777788773
No 171
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=95.44 E-value=0.018 Score=50.93 Aligned_cols=62 Identities=16% Similarity=0.196 Sum_probs=44.8
Q ss_pred HHHHHhhhccccEEEecCCCCCCCCCHHHHHHHHhcC-----CCCEEEecCCChHhHHHhhc--CCEEEEeceEe
Q psy9039 177 ETAKAASFFLSDGLIITGNATGDPADVSQLMSVKNAV-----DLPILIGSGVTSDNVEHYMT--ADALIIGSHFK 244 (251)
Q Consensus 177 ~~a~~a~~~~~D~v~VTG~~~g~~~~~~~l~~vr~~~-----~~PV~vG~GI~~~~v~~~~~--ADGvIVGS~~~ 244 (251)
+.++.|...|+|.+.+-- .+.+.++++.+.. .+|+.+.||||++|++++.. +|++.|||.+.
T Consensus 204 eea~eA~~aGaD~I~LDn------~~~e~l~~av~~l~~~~~~v~ieASGGIt~eni~~~a~tGVD~IsvGslt~ 272 (285)
T 1o4u_A 204 EDALRAVEAGADIVMLDN------LSPEEVKDISRRIKDINPNVIVEVSGGITEENVSLYDFETVDVISSSRLTL 272 (285)
T ss_dssp HHHHHHHHTTCSEEEEES------CCHHHHHHHHHHHHHHCTTSEEEEEECCCTTTGGGGCCTTCCEEEEGGGTS
T ss_pred HHHHHHHHcCCCEEEECC------CCHHHHHHHHHHhhccCCCceEEEECCCCHHHHHHHHHcCCCEEEEeHHHc
Confidence 445666657899987643 2334444333322 68999999999999999997 99999999654
No 172
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=95.03 E-value=0.034 Score=49.13 Aligned_cols=60 Identities=13% Similarity=0.130 Sum_probs=43.8
Q ss_pred HHHHhhhccccEEEecCCCCCCCCCHHHHHHHHhcC--CCCEEEecCCChHhHHHhhc--CCEEEEeceE
Q psy9039 178 TAKAASFFLSDGLIITGNATGDPADVSQLMSVKNAV--DLPILIGSGVTSDNVEHYMT--ADALIIGSHF 243 (251)
Q Consensus 178 ~a~~a~~~~~D~v~VTG~~~g~~~~~~~l~~vr~~~--~~PV~vG~GI~~~~v~~~~~--ADGvIVGS~~ 243 (251)
.++.|...|+|++.+--. ..+.++++.+.. ++|+.+.||||++|++++.. +|++.|||.+
T Consensus 208 ea~eA~~aGaD~I~ld~~------~~~~~k~av~~v~~~ipi~AsGGIt~eni~~~a~tGvD~IsVgs~~ 271 (286)
T 1x1o_A 208 ELEEALEAGADLILLDNF------PLEALREAVRRVGGRVPLEASGNMTLERAKAAAEAGVDYVSVGALT 271 (286)
T ss_dssp HHHHHHHHTCSEEEEESC------CHHHHHHHHHHHTTSSCEEEESSCCHHHHHHHHHHTCSEEECTHHH
T ss_pred HHHHHHHcCCCEEEECCC------CHHHHHHHHHHhCCCCeEEEEcCCCHHHHHHHHHcCCCEEEEcHHH
Confidence 345565668999866432 234444444333 69999999999999999997 9999998854
No 173
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=94.90 E-value=0.083 Score=47.29 Aligned_cols=96 Identities=16% Similarity=0.138 Sum_probs=56.9
Q ss_pred HHHhhCCCCcCCCCccEEEEeecCCCCccc----cCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeCChHHHHHHHH
Q psy9039 37 EIRKVLPPSVPVGVQHGVIVENMHDVPYVL----EAESGPEITANMTRLCAEIRKVLPPSVPVGVQILSGCNKAALATAQ 112 (251)
Q Consensus 37 ~a~~~a~~l~~~Gv~D~i~ieN~~~~Pf~~----p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~~~~~~ia~ 112 (251)
.+++.++.+++.|+ |.|-|-=+-..|.+. ++ +..+=.+-+..+++++++.++ +|+.|..+... + +..|.
T Consensus 50 ~al~~A~~~v~~GA-dIIDIGgeSTrPga~~~~~~V-~~~eE~~Rv~pvI~~l~~~~~--vpISIDT~~~~-V--a~aAl 122 (314)
T 3tr9_A 50 SALRTAEKMVDEGA-DILDIGGEATNPFVDIKTDSP-STQIELDRLLPVIDAIKKRFP--QLISVDTSRPR-V--MREAV 122 (314)
T ss_dssp HHHHHHHHHHHTTC-SEEEEECCCSCTTC-----CH-HHHHHHHHHHHHHHHHHHHCC--SEEEEECSCHH-H--HHHHH
T ss_pred HHHHHHHHHHHCCC-CEEEECCCCCCCCcccccCCC-CHHHHHHHHHHHHHHHHhhCC--CeEEEeCCCHH-H--HHHHH
Confidence 34444566788999 999873344456554 32 111222224456788888777 89999998633 4 44444
Q ss_pred HcCccceecccccccccCCCceeecCcchhHHHHHhcCC
Q psy9039 113 AAGLDFIRAESFVFGHMADEGLMNAQAGPLLRYRKQIGA 151 (251)
Q Consensus 113 a~g~~Fir~~~~~~~~~~~~Gli~~da~e~~~~r~~l~~ 151 (251)
..|++.+-. ..|.- ..+..+..+++++
T Consensus 123 ~aGa~iIND---------Vsg~~---~~~m~~v~a~~g~ 149 (314)
T 3tr9_A 123 NTGADMIND---------QRALQ---LDDALTTVSALKT 149 (314)
T ss_dssp HHTCCEEEE---------TTTTC---STTHHHHHHHHTC
T ss_pred HcCCCEEEE---------CCCCC---chHHHHHHHHhCC
Confidence 458888764 11211 1256777777876
No 174
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=94.76 E-value=0.019 Score=50.37 Aligned_cols=60 Identities=15% Similarity=0.169 Sum_probs=43.9
Q ss_pred HHHhhhccccEEEecCCCCCCCCCHHHHHHHHhcC-----CCCEEEecCCChHhHHHhhc--CCEEEEeceEe
Q psy9039 179 AKAASFFLSDGLIITGNATGDPADVSQLMSVKNAV-----DLPILIGSGVTSDNVEHYMT--ADALIIGSHFK 244 (251)
Q Consensus 179 a~~a~~~~~D~v~VTG~~~g~~~~~~~l~~vr~~~-----~~PV~vG~GI~~~~v~~~~~--ADGvIVGS~~~ 244 (251)
++.+...|+|.+.+-- .+++.++++++.. ++|+.+.||||++|++++.. +|++.|||.+.
T Consensus 195 ~~~A~~aGaD~I~ld~------~~~~~l~~~v~~l~~~~~~~~i~AsGGI~~~ni~~~~~aGaD~i~vGs~i~ 261 (273)
T 2b7n_A 195 AKNAMNAGADIVMCDN------LSVLETKEIAAYRDAHYPFVLLEASGNISLESINAYAKSGVDAISVGALIH 261 (273)
T ss_dssp HHHHHHHTCSEEEEET------CCHHHHHHHHHHHHHHCTTCEEEEESSCCTTTHHHHHTTTCSEEECTHHHH
T ss_pred HHHHHHcCCCEEEECC------CCHHHHHHHHHHhhccCCCcEEEEECCCCHHHHHHHHHcCCcEEEEcHHhc
Confidence 4555556899987631 2344555433332 48999999999999999997 99999999764
No 175
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=94.65 E-value=0.06 Score=43.30 Aligned_cols=69 Identities=12% Similarity=0.111 Sum_probs=49.6
Q ss_pred CcccHHHHHHHhhhccccEEEecCCCCCCCCCH-HHHHHHHhcC--CCCEEEecCCChHhHHHhhc--CCEEEE
Q psy9039 171 ADVDITETAKAASFFLSDGLIITGNATGDPADV-SQLMSVKNAV--DLPILIGSGVTSDNVEHYMT--ADALII 239 (251)
Q Consensus 171 ~~~~i~~~a~~a~~~~~D~v~VTG~~~g~~~~~-~~l~~vr~~~--~~PV~vG~GI~~~~v~~~~~--ADGvIV 239 (251)
.+.+.+++++.+....+|.+++|...+...+.. +.++.+|+.. ++||++||-+..+....+.. +|+++.
T Consensus 54 ~~~p~e~lv~aa~~~~~diV~lS~~~~~~~~~~~~~i~~L~~~g~~~i~v~vGG~~~~~~~~~l~~~G~d~v~~ 127 (161)
T 2yxb_A 54 LRQTPEQVAMAAVQEDVDVIGVSILNGAHLHLMKRLMAKLRELGADDIPVVLGGTIPIPDLEPLRSLGIREIFL 127 (161)
T ss_dssp SBCCHHHHHHHHHHTTCSEEEEEESSSCHHHHHHHHHHHHHHTTCTTSCEEEEECCCHHHHHHHHHTTCCEEEC
T ss_pred CCCCHHHHHHHHHhcCCCEEEEEeechhhHHHHHHHHHHHHhcCCCCCEEEEeCCCchhcHHHHHHCCCcEEEC
Confidence 446788888888778999999998765433333 5567788763 69999998886666544333 998664
No 176
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=94.51 E-value=0.025 Score=50.34 Aligned_cols=64 Identities=17% Similarity=0.263 Sum_probs=45.2
Q ss_pred cHHHHHHHhhhccccEEEecCCCCCCCCCHHHHHHHHhcC-----CCCEEEecCCChHhHHHhhc--CCEEEEeceEe
Q psy9039 174 DITETAKAASFFLSDGLIITGNATGDPADVSQLMSVKNAV-----DLPILIGSGVTSDNVEHYMT--ADALIIGSHFK 244 (251)
Q Consensus 174 ~i~~~a~~a~~~~~D~v~VTG~~~g~~~~~~~l~~vr~~~-----~~PV~vG~GI~~~~v~~~~~--ADGvIVGS~~~ 244 (251)
++++ ++.+...|+|.+.+.- .+++.++++++.. ++|+.+.||||++|++++.. +|++.|||.+.
T Consensus 206 tlee-~~~A~~aGaD~I~ld~------~~~~~l~~~v~~l~~~~~~~~I~ASGGIt~~ni~~~~~aGaD~i~vGs~i~ 276 (299)
T 2jbm_A 206 SLQE-AVQAAEAGADLVLLDN------FKPEELHPTATVLKAQFPSVAVEASGGITLDNLPQFCGPHIDVISMGMLTQ 276 (299)
T ss_dssp SHHH-HHHHHHTTCSEEEEES------CCHHHHHHHHHHHHHHCTTSEEEEESSCCTTTHHHHCCTTCCEEECTHHHH
T ss_pred CHHH-HHHHHHcCCCEEEECC------CCHHHHHHHHHHhhccCCCeeEEEECCCCHHHHHHHHHCCCCEEEEChhhc
Confidence 4433 4555556899987732 1244454433332 48999999999999999996 99999999653
No 177
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=94.45 E-value=0.075 Score=47.14 Aligned_cols=63 Identities=14% Similarity=0.230 Sum_probs=48.1
Q ss_pred cHHHHHHHhhhccccEEEecCCCCCCCCCHHHHHHHHhcC--CCCEEEecCCChHhHHHhhc--CCEEEEeceE
Q psy9039 174 DITETAKAASFFLSDGLIITGNATGDPADVSQLMSVKNAV--DLPILIGSGVTSDNVEHYMT--ADALIIGSHF 243 (251)
Q Consensus 174 ~i~~~a~~a~~~~~D~v~VTG~~~g~~~~~~~l~~vr~~~--~~PV~vG~GI~~~~v~~~~~--ADGvIVGS~~ 243 (251)
++++ ++.+...|+|.+.+. ..+.+.++++++.. ++|+.+.||||.+|++++.. +|++.|||.+
T Consensus 217 tlee-~~eA~~aGaD~I~ld------~~~~e~l~~~v~~~~~~~~I~ASGGIt~~~i~~~a~~GvD~isvGsli 283 (296)
T 1qap_A 217 NLDE-LDDALKAGADIIMLD------NFNTDQMREAVKRVNGQARLEVSGNVTAETLREFAETGVDFISVGALT 283 (296)
T ss_dssp SHHH-HHHHHHTTCSEEEES------SCCHHHHHHHHHTTCTTCCEEECCCSCHHHHHHHHHTTCSEEECSHHH
T ss_pred CHHH-HHHHHHcCCCEEEEC------CCCHHHHHHHHHHhCCCCeEEEECCCCHHHHHHHHHcCCCEEEEeHHH
Confidence 4433 455555689998773 24567777666665 58999999999999999996 9999999954
No 178
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=94.31 E-value=0.067 Score=50.17 Aligned_cols=66 Identities=17% Similarity=0.253 Sum_probs=48.7
Q ss_pred HHHHHHHhhhccccEEEecCCCCCCCC-CHHHHHHHHhcC-CCCEEEecCCChHhHHHhhc--CCEEEEec
Q psy9039 175 ITETAKAASFFLSDGLIITGNATGDPA-DVSQLMSVKNAV-DLPILIGSGVTSDNVEHYMT--ADALIIGS 241 (251)
Q Consensus 175 i~~~a~~a~~~~~D~v~VTG~~~g~~~-~~~~l~~vr~~~-~~PV~vG~GI~~~~v~~~~~--ADGvIVGS 241 (251)
..+.++.+...|+|++++++.. +... .++.++++++.+ ++|++.|+..+.+.+..++. ||++.||.
T Consensus 234 ~~~~a~~l~~~G~d~ivi~~a~-g~~~~~~~~i~~l~~~~p~~pvi~G~v~t~~~a~~~~~~Gad~I~vg~ 303 (491)
T 1zfj_A 234 TFERAEALFEAGADAIVIDTAH-GHSAGVLRKIAEIRAHFPNRTLIAGNIATAEGARALYDAGVDVVKVGI 303 (491)
T ss_dssp HHHHHHHHHHHTCSEEEECCSC-TTCHHHHHHHHHHHHHCSSSCEEEEEECSHHHHHHHHHTTCSEEEECS
T ss_pred HHHHHHHHHHcCCCeEEEeeec-CcchhHHHHHHHHHHHCCCCcEeCCCccCHHHHHHHHHcCCCEEEECc
Confidence 3455566655799999998853 3322 247788899887 89999555558888888886 99999983
No 179
>3c2e_A Nicotinate-nucleotide pyrophosphorylase; qprtase, prtase, BNA6, mechanism, cytoplasm, glycosyltransferase, nucleus; 1.90A {Saccharomyces cerevisiae} PDB: 3c2f_A* 3c2o_A* 3c2v_A* 3c2r_A*
Probab=94.09 E-value=0.025 Score=50.12 Aligned_cols=60 Identities=18% Similarity=0.185 Sum_probs=32.2
Q ss_pred HHHhhhccccEEEecCCCCCCCCCHHHHHHHHhcC--------CCCEEEecCCChHhHHHhhc--CCEEEEeceEe
Q psy9039 179 AKAASFFLSDGLIITGNATGDPADVSQLMSVKNAV--------DLPILIGSGVTSDNVEHYMT--ADALIIGSHFK 244 (251)
Q Consensus 179 a~~a~~~~~D~v~VTG~~~g~~~~~~~l~~vr~~~--------~~PV~vG~GI~~~~v~~~~~--ADGvIVGS~~~ 244 (251)
++.+...|+|++.+.- . +++.++++++.. ++|+.+.||||++|++++.. +|++.|||.+.
T Consensus 212 ~~~A~~aGaD~I~ld~---~---~~~~l~~~v~~l~~~~~g~~~v~I~ASGGIt~~ni~~~~~~GvD~i~vGs~i~ 281 (294)
T 3c2e_A 212 ATEAIEAGADVIMLDN---F---KGDGLKMCAQSLKNKWNGKKHFLLECSGGLNLDNLEEYLCDDIDIYSTSSIHQ 281 (294)
T ss_dssp HHHHHHHTCSEEECCC---------------------------CCEEEEECCCCC------CCCSCSEEECGGGTS
T ss_pred HHHHHHcCCCEEEECC---C---CHHHHHHHHHHhcccccCCCCeEEEEECCCCHHHHHHHHHcCCCEEEEechhc
Confidence 3444446899987621 2 233344333332 38999999999999999996 99999999864
No 180
>3tjl_A NADPH dehydrogenase; OLD yellow enzyme, flavin mononucleotide, TIM barrel, NADPH oxidoreductase, enone reductase; HET: FMN; 1.50A {Scheffersomyces stipitis cbs 6054} PDB: 3upw_A* 4df2_A*
Probab=94.05 E-value=0.034 Score=51.55 Aligned_cols=43 Identities=9% Similarity=-0.006 Sum_probs=31.6
Q ss_pred HHHHHHhcCCCCEEEecCCC-hHh----HHHhh-c-CCEEEEeceEeecC
Q psy9039 205 QLMSVKNAVDLPILIGSGVT-SDN----VEHYM-T-ADALIIGSHFKQGG 247 (251)
Q Consensus 205 ~l~~vr~~~~~PV~vG~GI~-~~~----v~~~~-~-ADGvIVGS~~~~~g 247 (251)
.+..+|+..+.||++.|||+ +++ +.+.+ . ||+|.+|..|+-|-
T Consensus 304 ~~~~ir~~~~~PvI~~Ggi~~~~dA~~~i~~~~~g~aDlVa~GR~~iaNP 353 (407)
T 3tjl_A 304 DNEFVSKIWKGVILKAGNYSYDAPEFKTLKEDIADKRTLVGFSRYFTSNP 353 (407)
T ss_dssp CSHHHHHHCCSEEEEESCGGGGTTTTHHHHHHHTTSSEEEECSHHHHHCT
T ss_pred HHHHHHHHhCCCEEecCCCCCHHHHHHHHHhhccCCCeEEEeChhhhhCc
Confidence 35677778889999999996 442 33323 4 99999999887653
No 181
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=93.97 E-value=0.079 Score=49.83 Aligned_cols=65 Identities=25% Similarity=0.340 Sum_probs=49.4
Q ss_pred HHHHHHhhhccccEEEecCCCCCCCC-CHHHHHHHHhcC-CCCEEEecCCChHhHHHhhc--CCEEEEec
Q psy9039 176 TETAKAASFFLSDGLIITGNATGDPA-DVSQLMSVKNAV-DLPILIGSGVTSDNVEHYMT--ADALIIGS 241 (251)
Q Consensus 176 ~~~a~~a~~~~~D~v~VTG~~~g~~~-~~~~l~~vr~~~-~~PV~vG~GI~~~~v~~~~~--ADGvIVGS 241 (251)
.+.++.+...|+|++.+.... |... .++.++++|+.+ ++||++|++.+.+.+..+.+ +|++.||.
T Consensus 239 ~~~a~~l~~aGvd~v~i~~~~-G~~~~~~e~i~~i~~~~p~~pvi~g~~~t~e~a~~l~~~G~d~I~v~~ 307 (494)
T 1vrd_A 239 MERVEKLVKAGVDVIVIDTAH-GHSRRVIETLEMIKADYPDLPVVAGNVATPEGTEALIKAGADAVKVGV 307 (494)
T ss_dssp HHHHHHHHHTTCSEEEECCSC-CSSHHHHHHHHHHHHHCTTSCEEEEEECSHHHHHHHHHTTCSEEEECS
T ss_pred HHHHHHHHHhCCCEEEEEecC-CchHHHHHHHHHHHHHCCCceEEeCCcCCHHHHHHHHHcCCCEEEEcC
Confidence 444555555799999885543 3332 357899999988 79999998889999888875 99999954
No 182
>2jgq_A Triosephosphate isomerase; glycolysis, pentose shunt, gluconeogenesis, lipid synthesis, fatty acid biosynthesis; HET: QGA; 2.3A {Helicobacter pylori}
Probab=93.93 E-value=0.029 Score=48.20 Aligned_cols=41 Identities=27% Similarity=0.417 Sum_probs=33.6
Q ss_pred HHHHHHhcC--CCCEEEecCCChHhHHHhhc---CCEEEEeceEee
Q psy9039 205 QLMSVKNAV--DLPILIGSGVTSDNVEHYMT---ADALIIGSHFKQ 245 (251)
Q Consensus 205 ~l~~vr~~~--~~PV~vG~GI~~~~v~~~~~---ADGvIVGS~~~~ 245 (251)
..+.+|+.. +++|+-||+++++|+.+++. .||+-||++-.+
T Consensus 177 v~~~IR~~l~~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgAsl~ 222 (233)
T 2jgq_A 177 THGFLKQILNQKTPLLYGGSVNTQNAKEILGIDSVDGLLIGSASWE 222 (233)
T ss_dssp HHHHHHHHSCTTSCEEEESSCCTTTHHHHHTSTTCCEEEESGGGGS
T ss_pred HHHHHHHHHhcCCcEEEcCCcChhhHHHHhcCCCCCeeEecHHHhC
Confidence 344677665 59999999999999999984 999999987543
No 183
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=93.52 E-value=0.092 Score=46.41 Aligned_cols=63 Identities=6% Similarity=0.130 Sum_probs=46.2
Q ss_pred cHHHHHHHhhhccccEEEecCCCCCCCCCHHHHHHHHhcC--CCCEEEecCCChHhHHHhhc--CCEEEEeceE
Q psy9039 174 DITETAKAASFFLSDGLIITGNATGDPADVSQLMSVKNAV--DLPILIGSGVTSDNVEHYMT--ADALIIGSHF 243 (251)
Q Consensus 174 ~i~~~a~~a~~~~~D~v~VTG~~~g~~~~~~~l~~vr~~~--~~PV~vG~GI~~~~v~~~~~--ADGvIVGS~~ 243 (251)
++ +.++.|...|+|.+-.-- .+.+.++++.+.. ++++.+.||||++|++++.. +|.+.||+..
T Consensus 207 tl-~ea~eAl~aGaD~I~LDn------~~~~~l~~av~~~~~~v~ieaSGGIt~~~i~~~a~tGVD~IsvGalt 273 (287)
T 3tqv_A 207 NL-DELNQAIAAKADIVMLDN------FSGEDIDIAVSIARGKVALEVSGNIDRNSIVAIAKTGVDFISVGAIT 273 (287)
T ss_dssp SH-HHHHHHHHTTCSEEEEES------CCHHHHHHHHHHHTTTCEEEEESSCCTTTHHHHHTTTCSEEECSHHH
T ss_pred CH-HHHHHHHHcCCCEEEEcC------CCHHHHHHHHHhhcCCceEEEECCCCHHHHHHHHHcCCCEEEEChhh
Confidence 44 445666666899987732 2345555544433 68999999999999999997 9999999754
No 184
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=93.52 E-value=0.08 Score=46.96 Aligned_cols=96 Identities=14% Similarity=0.115 Sum_probs=53.3
Q ss_pred HHHHhhCCCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeCChHHHHHHHHHcC
Q psy9039 36 AEIRKVLPPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQILSGCNKAALATAQAAG 115 (251)
Q Consensus 36 ~~a~~~a~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~~~~~~ia~a~g 115 (251)
+.+++.++.+++.|+ |.|-|-=+-..|.+.++ +..+-.+-+..+++++++. + +|+.+.++.. ..+..|...|
T Consensus 52 ~~a~~~a~~~v~~GA-dIIDIGgeSTrPga~~v-~~~eE~~Rv~pvI~~l~~~-~--vpiSIDT~~~---~Va~aAl~aG 123 (294)
T 2dqw_A 52 ERALERAREMVAEGA-DILDLGAESTRPGAAPV-PVEEEKRRLLPVLEAVLSL-G--VPVSVDTRKP---EVAEEALKLG 123 (294)
T ss_dssp -CCHHHHHHHHHHTC-SEEEEECC------------CCHHHHHHHHHHHHHTT-C--SCEEEECSCH---HHHHHHHHHT
T ss_pred HHHHHHHHHHHHCCC-CEEEECCCcCCCCCCCC-CHHHHHHHHHHHHHHHHhC-C--CeEEEECCCH---HHHHHHHHhC
Confidence 444555566888999 99987444445665554 2233333444566777765 5 7999999863 3344445558
Q ss_pred ccceecccccccccCCCceeecCcchhHHHHHhcCC
Q psy9039 116 LDFIRAESFVFGHMADEGLMNAQAGPLLRYRKQIGA 151 (251)
Q Consensus 116 ~~Fir~~~~~~~~~~~~Gli~~da~e~~~~r~~l~~ 151 (251)
++.+-. ..|. ...+..+..+++++
T Consensus 124 a~iINd---------Vsg~---~d~~m~~v~a~~~~ 147 (294)
T 2dqw_A 124 AHLLND---------VTGL---RDERMVALAARHGV 147 (294)
T ss_dssp CSEEEC---------SSCS---CCHHHHHHHHHHTC
T ss_pred CCEEEE---------CCCC---CChHHHHHHHHhCC
Confidence 887764 2222 22356777788876
No 185
>3tjx_A Dihydroorotate dehydrogenase; PYRD, dhodh, lmdhodh, oxidored mutation H174A; HET: FMN; 1.64A {Leishmania major} PDB: 3gz3_A* 3gye_A* 3tro_A*
Probab=93.51 E-value=0.027 Score=50.87 Aligned_cols=44 Identities=16% Similarity=0.233 Sum_probs=35.6
Q ss_pred HHHHHHHhcC-CCCEEEecCC-ChHhHHHhhc--CCEEEEeceEeecC
Q psy9039 204 SQLMSVKNAV-DLPILIGSGV-TSDNVEHYMT--ADALIIGSHFKQGG 247 (251)
Q Consensus 204 ~~l~~vr~~~-~~PV~vG~GI-~~~~v~~~~~--ADGvIVGS~~~~~g 247 (251)
+.+.++++.+ ++||+.-||| |.+++.+.+. ||.|.|||+|...|
T Consensus 266 ~~v~~~~~~~~~~pIIg~GGI~s~~Da~e~i~aGAs~Vqv~Ta~~y~G 313 (354)
T 3tjx_A 266 ANINAFYRRCPGKLIFGCGGVYTGEDAFLHVLAGASMVQVGTALQEEG 313 (354)
T ss_dssp HHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHHTEEEEEECHHHHHHC
T ss_pred HHHHHHHHhcCCCcEEEeCCcCCHHHHHHHHHcCCCEEEEChhhhhcC
Confidence 4456666665 7999999999 7899888885 99999999987554
No 186
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=93.46 E-value=0.12 Score=47.02 Aligned_cols=150 Identities=19% Similarity=0.179 Sum_probs=88.8
Q ss_pred CCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeCChHHHHHHHHHcCccceecc
Q psy9039 43 PPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQILSGCNKAALATAQAAGLDFIRAE 122 (251)
Q Consensus 43 ~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~~~~~~ia~a~g~~Fir~~ 122 (251)
+.|.++|+ |.|-+ .+|-.+ ..+.++++|+.++ +|+...+-+|. ..++. |...|++-+|.|
T Consensus 53 ~~l~~aG~-diVRv----avp~~~-----------~a~al~~I~~~~~--vPlvaDiHf~~-~lal~-a~e~G~dklRIN 112 (366)
T 3noy_A 53 KRLYEAGC-EIVRV----AVPHKE-----------DVEALEEIVKKSP--MPVIADIHFAP-SYAFL-SMEKGVHGIRIN 112 (366)
T ss_dssp HHHHHTTC-CEEEE----ECCSHH-----------HHHHHHHHHHHCS--SCEEEECCSCH-HHHHH-HHHTTCSEEEEC
T ss_pred HHHHHcCC-CEEEe----CCCChH-----------HHHHHHHHHhcCC--CCEEEeCCCCH-HHHHH-HHHhCCCeEEEC
Confidence 88999999 99964 443211 2577888998888 89999998886 43333 344677779975
Q ss_pred cccccccCCCceeecCcchhHHHHHhcCCCcchh------h-hhhHhhccCCCCCCcccHHHHHHHh---hhccccEEEe
Q psy9039 123 SFVFGHMADEGLMNAQAGPLLRYRKQIGADNVLV------F-TDIKKKHSSHAITADVDITETAKAA---SFFLSDGLII 192 (251)
Q Consensus 123 ~~~~~~~~~~Gli~~da~e~~~~r~~l~~~~i~i------~-a~v~~k~~~~~~~~~~~i~~~a~~a---~~~~~D~v~V 192 (251)
. ...+. .....++.+.+++.+. .+.+ + .++..|++-+ +++...+...+.+ +..+-+-+++
T Consensus 113 P---GNig~----~~~~~~vv~~ak~~~~-piRIGvN~GSL~~~ll~~yg~~--~~eamVeSAl~~~~~~e~~gf~~ivi 182 (366)
T 3noy_A 113 P---GNIGK----EEIVREIVEEAKRRGV-AVRIGVNSGSLEKDLLEKYGYP--SAEALAESALRWSEKFEKWGFTNYKV 182 (366)
T ss_dssp H---HHHSC----HHHHHHHHHHHHHHTC-EEEEEEEGGGCCHHHHHHHSSC--CHHHHHHHHHHHHHHHHHTTCCCEEE
T ss_pred C---cccCc----hhHHHHHHHHHHHcCC-CEEEecCCcCCCHHHHHhcCCC--CHHHHHHHHHHHHHHHHhCCCCeEEE
Confidence 1 11111 1124567777777775 4444 1 2455566533 2222222222222 2245577777
Q ss_pred cCCCCCCCCCHHHHHHHHhcCCCCEEEecC
Q psy9039 193 TGNATGDPADVSQLMSVKNAVDLPILIGSG 222 (251)
Q Consensus 193 TG~~~g~~~~~~~l~~vr~~~~~PV~vG~G 222 (251)
|=..++.....+..+.+.+.++.|+-+|-+
T Consensus 183 S~K~S~v~~~i~ayr~la~~~dyPLHlGvT 212 (366)
T 3noy_A 183 SIKGSDVLQNVRANLIFAERTDVPLHIGIT 212 (366)
T ss_dssp EEECSSHHHHHHHHHHHHHHCCCCEEECCS
T ss_pred eeecCChHHHHHHHHHHHhccCCCEEEccC
Confidence 766544333345566677778999986643
No 187
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=93.37 E-value=0.13 Score=45.52 Aligned_cols=96 Identities=16% Similarity=0.137 Sum_probs=57.9
Q ss_pred HHHHhhCCCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeCChHHHHHHHHHcC
Q psy9039 36 AEIRKVLPPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQILSGCNKAALATAQAAG 115 (251)
Q Consensus 36 ~~a~~~a~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~~~~~~ia~a~g 115 (251)
+.+++.++.+++.|+ |.|-|-=+-..|.+.++ +..+-.+-+..+++.+++. + +|+.|..+... + +..|...|
T Consensus 46 ~~a~~~a~~~v~~GA-diIDIGgeSTrPga~~v-~~~eE~~Rv~pvi~~l~~~-~--vpiSIDT~~~~-V--a~aAl~aG 117 (294)
T 2y5s_A 46 DDALRRAERMIAEGA-DLLDIGGESTRPGAPPV-PLDEELARVIPLVEALRPL-N--VPLSIDTYKPA-V--MRAALAAG 117 (294)
T ss_dssp THHHHHHHHHHHTTC-SEEEEESSCCSTTCCCC-CHHHHHHHHHHHHHHHGGG-C--SCEEEECCCHH-H--HHHHHHHT
T ss_pred HHHHHHHHHHHHCCC-CEEEECCCcCCCCCCCC-CHHHHHHHHHHHHHHHhhC-C--CeEEEECCCHH-H--HHHHHHcC
Confidence 344455566888999 99987444445666654 3334434444566777655 5 79999998632 3 44445558
Q ss_pred ccceecccccccccCCCceeecCcchhHHHHHhcCC
Q psy9039 116 LDFIRAESFVFGHMADEGLMNAQAGPLLRYRKQIGA 151 (251)
Q Consensus 116 ~~Fir~~~~~~~~~~~~Gli~~da~e~~~~r~~l~~ 151 (251)
++.+-. ..|.- ..+..+..+++++
T Consensus 118 a~iINd---------Vsg~~---d~~m~~~~a~~~~ 141 (294)
T 2y5s_A 118 ADLIND---------IWGFR---QPGAIDAVRDGNS 141 (294)
T ss_dssp CSEEEE---------TTTTC---STTHHHHHSSSSC
T ss_pred CCEEEE---------CCCCC---chHHHHHHHHhCC
Confidence 888764 11211 2346667777776
No 188
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=93.26 E-value=0.049 Score=51.14 Aligned_cols=161 Identities=16% Similarity=0.154 Sum_probs=88.2
Q ss_pred hCCCCcCCCCccEEEEeecCCCCccc--cCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeCChH-HHHHHHHHcCcc
Q psy9039 41 VLPPSVPVGVQHGVIVENMHDVPYVL--EAESGPEITANMTRLCAEIRKVLPPSVPVGVQILSGCNK-AALATAQAAGLD 117 (251)
Q Consensus 41 ~a~~l~~~Gv~D~i~ieN~~~~Pf~~--p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~~-~~~~ia~a~g~~ 117 (251)
++++..+.|+ |.+ |+=|.. |-...|...+ .+++. .. ..-|-++.|... .-..++...+.+
T Consensus 267 da~~a~~~Ga-d~i------GfIf~~~SpR~V~~~~a~---~i~~~----~~---v~~VgVFvn~~~~~i~~~~~~~~ld 329 (452)
T 1pii_A 267 DAKAAYDAGA-IYG------GLIFVATSPRCVNVEQAQ---EVMAA----AP---LQYVGVFRNHDIADVVDKAKVLSLA 329 (452)
T ss_dssp HHHHHHHHTC-SEE------EEECCTTCTTBCCHHHHH---HHHHH----CC---CEEEEEESSCCHHHHHHHHHHHTCS
T ss_pred HHHHHHhcCC-CEE------EeecCCCCCCCCCHHHHH---HHHhc----CC---CCEEEEEeCCCHHHHHHHHHhcCCC
Confidence 3366678899 988 444432 1123343333 23332 22 223445567643 336666667789
Q ss_pred ceecccccccccCCCceeecCcchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhc-cccEEEe-cC-
Q psy9039 118 FIRAESFVFGHMADEGLMNAQAGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFF-LSDGLII-TG- 194 (251)
Q Consensus 118 Fir~~~~~~~~~~~~Gli~~da~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~-~~D~v~V-TG- 194 (251)
+++.+ | ..+.+.+..++.+++. .++++.-+..+. ... . ..| .+|++.. |+
T Consensus 330 ~vQLH---G---------~E~~~~~~~l~~~~p~-~~~iika~~v~~-------~~~-----~--~~~~~~d~~LlD~~~ 382 (452)
T 1pii_A 330 AVQLH---G---------NEEQLYIDTLREALPA-HVAIWKALSVGE-------TLP-----A--REFQHVDKYVLDNGQ 382 (452)
T ss_dssp EEEEC---S---------CCCHHHHHHHHHHSCT-TSEEEEEEECSS-------SCC-----C--CCCTTCCEEEEESCS
T ss_pred EEEEC---C---------CCCHHHHHHHHhhccC-CCcEEEEEecCC-------ccc-----h--hhhhcccEEEecCCC
Confidence 98864 2 1123333445555542 344442222221 100 0 112 3565544 21
Q ss_pred CCCCCCCCHHHHHHHHhcCCCCEEEecCCChHhHHHhhc--CCEEEEeceEee-cCe
Q psy9039 195 NATGDPADVSQLMSVKNAVDLPILIGSGVTSDNVEHYMT--ADALIIGSHFKQ-GGR 248 (251)
Q Consensus 195 ~~~g~~~~~~~l~~vr~~~~~PV~vG~GI~~~~v~~~~~--ADGvIVGS~~~~-~g~ 248 (251)
..+|..-+++.+. +..+.|++++||++|+|+.+++. ..|+=|-|.+.. .|+
T Consensus 383 GGtG~~fdW~~l~---~~~~~p~iLAGGL~p~NV~~ai~~~p~gvDvsSGVE~~pG~ 436 (452)
T 1pii_A 383 GGSGQRFDWSLLN---GQSLGNVLLAGGLGADNCVEAAQTGCAGLDFNSAVESQPGI 436 (452)
T ss_dssp CCSSCCCCGGGGT---TSCCTTEEEESSCCTTTHHHHHTTCCSEEEECGGGEEETTE
T ss_pred CCCCCccCHHHhh---cccCCcEEEEcCCCHHHHHHHHhcCCCEEEeCCceeCCCCC
Confidence 2345555776654 33478999999999999988776 899999998874 454
No 189
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=93.21 E-value=0.25 Score=43.74 Aligned_cols=178 Identities=12% Similarity=0.096 Sum_probs=98.0
Q ss_pred CcCCCCccEEEEee------cCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEE---ee-CChHHH---HHHH
Q psy9039 45 SVPVGVQHGVIVEN------MHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQI---LS-GCNKAA---LATA 111 (251)
Q Consensus 45 l~~~Gv~D~i~ieN------~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~---~~-N~~~~~---~~ia 111 (251)
+++.|+ |+|.+.- .+|.| | -++++...|...++++.+.++ .|+.+.+ |- |+ ... ..-.
T Consensus 33 ~~~aG~-~ai~vs~~~~a~~~~G~p--D---~~~vt~~em~~~~~~I~~~~~--~PviaD~d~Gyg~~~-~~~~~~v~~l 103 (295)
T 1xg4_A 33 AQRAGY-QAIYLSGGGVAAGSLGLP--D---LGISTLDDVLTDIRRITDVCS--LPLLVDADIGFGSSA-FNVARTVKSM 103 (295)
T ss_dssp HHHTTC-SCEEECHHHHHHTTTCCC--S---SSCSCHHHHHHHHHHHHHHCC--SCEEEECTTCSSSSH-HHHHHHHHHH
T ss_pred HHHcCC-CEEEECchHhhhhhcCCC--C---CCCCCHHHHHHHHHHHHhhCC--CCEEecCCcccCCCH-HHHHHHHHHH
Confidence 356799 9998863 33432 2 378888889999999999888 7988887 75 43 111 1111
Q ss_pred HHcCccceecccccc-cccCCCc--eeecC---cchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhh--
Q psy9039 112 QAAGLDFIRAESFVF-GHMADEG--LMNAQ---AGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAAS-- 183 (251)
Q Consensus 112 ~a~g~~Fir~~~~~~-~~~~~~G--li~~d---a~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~-- 183 (251)
...|+.-+..+--++ ..++-.| -+.|. ...+...++.-...+..+.+..... ....+++..+.+.
T Consensus 104 ~~aGa~gv~iEd~~~~k~cgH~~gk~L~p~~~~~~~I~Aa~~a~~~~~~~i~aRtda~-------~~~gl~~ai~ra~ay 176 (295)
T 1xg4_A 104 IKAGAAGLHIEDQVGAKRSGHRPNKAIVSKEEMVDRIRAAVDAKTDPDFVIMARTDAL-------AVEGLDAAIERAQAY 176 (295)
T ss_dssp HHHTCSEEEEECBCSSCCCTTSSSCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECCH-------HHHCHHHHHHHHHHH
T ss_pred HHcCCeEEEECCCCCCcccCCCCCCccCCHHHHHHHHHHHHHhccCCCcEEEEecHHh-------hhcCHHHHHHHHHHH
Confidence 234555555431111 0011000 12222 1122222222211234443311100 0012344555554
Q ss_pred -hccccEEEecCCCCCCCCCHHHHHHHHhcCCCCEEEe---cCCCh-HhHHHhhc--CCEEEEeceE
Q psy9039 184 -FFLSDGLIITGNATGDPADVSQLMSVKNAVDLPILIG---SGVTS-DNVEHYMT--ADALIIGSHF 243 (251)
Q Consensus 184 -~~~~D~v~VTG~~~g~~~~~~~l~~vr~~~~~PV~vG---~GI~~-~~v~~~~~--ADGvIVGS~~ 243 (251)
..|+|++.+-|. ++.+.++++.+.+++|+++. ||-+| -+..++.. .+.+++|.++
T Consensus 177 ~eAGAd~i~~e~~-----~~~~~~~~i~~~~~iP~~~N~~~~g~~p~~~~~eL~~~G~~~v~~~~~~ 238 (295)
T 1xg4_A 177 VEAGAEMLFPEAI-----TELAMYRQFADAVQVPILANITEFGATPLFTTDELRSAHVAMALYPLSA 238 (295)
T ss_dssp HHTTCSEEEETTC-----CSHHHHHHHHHHHCSCBEEECCSSSSSCCCCHHHHHHTTCSEEEESSHH
T ss_pred HHcCCCEEEEeCC-----CCHHHHHHHHHHcCCCEEEEecccCCCCCCCHHHHHHcCCCEEEEChHH
Confidence 369999999764 35788889998889998652 34443 34555554 9999998764
No 190
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=92.97 E-value=0.37 Score=40.83 Aligned_cols=161 Identities=19% Similarity=0.205 Sum_probs=79.1
Q ss_pred CCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeCChHH----HHHHHHHcCccceecccc
Q psy9039 49 GVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQILSGCNKA----ALATAQAAGLDFIRAESF 124 (251)
Q Consensus 49 Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~~~----~~~ia~a~g~~Fir~~~~ 124 (251)
.+ |.+.+ |+++-. .-||.+ ++++|+... .++-+.+=..+... ........|++++-++.+
T Consensus 37 ~v-~~~Kv----g~~lf~--~~G~~~-------v~~l~~~~g--~~v~lD~Kl~DipnTv~~~~~~~~~~gad~vtvh~~ 100 (228)
T 3m47_A 37 YI-DTVKI----GYPLVL--SEGMDI-------IAEFRKRFG--CRIIADFKVADIPETNEKICRATFKAGADAIIVHGF 100 (228)
T ss_dssp TC-SEEEE----EHHHHH--HHCTHH-------HHHHHHHHC--CEEEEEEEECSCHHHHHHHHHHHHHTTCSEEEEEST
T ss_pred cc-cEEEE----cHHHHH--hcCHHH-------HHHHHhcCC--CeEEEEEeecccHhHHHHHHHHHHhCCCCEEEEecc
Confidence 48 88876 444432 246654 345555223 36666665554211 223334467788776533
Q ss_pred cccccCCCceeecCcchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCCCCCCCCHH
Q psy9039 125 VFGHMADEGLMNAQAGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNATGDPADVS 204 (251)
Q Consensus 125 ~~~~~~~~Gli~~da~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~g~~~~~~ 204 (251)
.|. .. .....++.++.+. .+.+++.......... -.....+.++.+...|.|+++++.. ..+
T Consensus 101 ~G~-----~~----l~~~~~~~~~~g~-~v~vLt~~s~~~~~~~--~~~~~~~~a~~a~~~G~~GvV~~at------~~~ 162 (228)
T 3m47_A 101 PGA-----DS----VRACLNVAEEMGR-EVFLLTEMSHPGAEMF--IQGAADEIARMGVDLGVKNYVGPST------RPE 162 (228)
T ss_dssp TCH-----HH----HHHHHHHHHHHTC-EEEEECCCCSGGGGTT--HHHHHHHHHHHHHHTTCCEEECCSS------CHH
T ss_pred CCH-----HH----HHHHHHHHHhcCC-CeEEEEeCCCccHHHH--HHHHHHHHHHHHHHhCCcEEEECCC------ChH
Confidence 321 11 2223444444453 4544432221110000 0011234455555578999776542 356
Q ss_pred HHHHHHhcCC--CCEEEecCCChH--hHHHhhc--CCEEEEeceEee
Q psy9039 205 QLMSVKNAVD--LPILIGSGVTSD--NVEHYMT--ADALIIGSHFKQ 245 (251)
Q Consensus 205 ~l~~vr~~~~--~PV~vG~GI~~~--~v~~~~~--ADGvIVGS~~~~ 245 (251)
.++++|+.+. .++ +-.||.++ +. +... ||.++||+++-+
T Consensus 163 e~~~ir~~~~~~~~i-v~PGI~~~g~~p-~~~~aGad~iVvGr~I~~ 207 (228)
T 3m47_A 163 RLSRLREIIGQDSFL-ISPGVGAQGGDP-GETLRFADAIIVGRSIYL 207 (228)
T ss_dssp HHHHHHHHHCSSSEE-EECC----------CGGGTCSEEEECHHHHT
T ss_pred HHHHHHHhcCCCCEE-EecCcCcCCCCH-hHHHcCCCEEEECHHHhC
Confidence 6778887763 566 55577544 56 5554 999999998754
No 191
>1yya_A Triosephosphate isomerase; riken structural genomics/proteom initiative, RSGI, structural genomics; 1.60A {Thermus thermophilus}
Probab=92.92 E-value=0.051 Score=47.14 Aligned_cols=32 Identities=22% Similarity=0.402 Sum_probs=28.5
Q ss_pred CCCEEEecCCChHhHHHhhc---CCEEEEeceEee
Q psy9039 214 DLPILIGSGVTSDNVEHYMT---ADALIIGSHFKQ 245 (251)
Q Consensus 214 ~~PV~vG~GI~~~~v~~~~~---ADGvIVGS~~~~ 245 (251)
+++|+-||+++++|+.+++. .||+-||++-.+
T Consensus 204 ~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgAsL~ 238 (250)
T 1yya_A 204 RVRILYGGSVNPKNFADLLSMPNVDGGLVGGASLE 238 (250)
T ss_dssp TCEEEEESSCCTTTHHHHHTSTTCCEEEESGGGSS
T ss_pred ceeEEEcCCCCHHHHHHHHcCCCCCeeEeeHHHhC
Confidence 58999999999999999994 999999987543
No 192
>2btm_A TIM, protein (triosephosphate isomerase); thermophilic triose-phosphate, glycolysis; 2.40A {Geobacillus stearothermophilus} SCOP: c.1.1.1 PDB: 1btm_A
Probab=92.91 E-value=0.051 Score=47.17 Aligned_cols=32 Identities=22% Similarity=0.497 Sum_probs=28.4
Q ss_pred CCCEEEecCCChHhHHHhhc---CCEEEEeceEee
Q psy9039 214 DLPILIGSGVTSDNVEHYMT---ADALIIGSHFKQ 245 (251)
Q Consensus 214 ~~PV~vG~GI~~~~v~~~~~---ADGvIVGS~~~~ 245 (251)
+++|+-||+++++|+.+++. .||+-||++-.+
T Consensus 204 ~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgAsL~ 238 (252)
T 2btm_A 204 AIRIQYGGSVKPDNIRDFLAQQQIDGALVGGASLE 238 (252)
T ss_dssp TSEEEEESSCCTTTHHHHHTSTTCCEEEESGGGSS
T ss_pred ceeEEEcCCCCHHHHHHHHcCCCCCeeEecHHHhC
Confidence 58999999999999999993 999999987543
No 193
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=92.91 E-value=0.14 Score=45.91 Aligned_cols=62 Identities=11% Similarity=0.135 Sum_probs=45.6
Q ss_pred cHHHHHHHhhhccccEEEecCCCCCCCCCHHHHHHHHhcC--CCCEEEecCCChHhHHHhhc--CCEEEEece
Q psy9039 174 DITETAKAASFFLSDGLIITGNATGDPADVSQLMSVKNAV--DLPILIGSGVTSDNVEHYMT--ADALIIGSH 242 (251)
Q Consensus 174 ~i~~~a~~a~~~~~D~v~VTG~~~g~~~~~~~l~~vr~~~--~~PV~vG~GI~~~~v~~~~~--ADGvIVGS~ 242 (251)
+++ .++.|...|+|.+-+-- .+.+.++++++.. ++++.+.||||++|++++.. +|++.||+.
T Consensus 240 tld-ea~eAl~aGaD~I~LDn------~~~~~l~~av~~l~~~v~ieaSGGIt~~~I~~~a~tGVD~isvGal 305 (320)
T 3paj_A 240 TLA-ELEEAISAGADIIMLDN------FSLEMMREAVKINAGRAALENSGNITLDNLKECAETGVDYISVGAL 305 (320)
T ss_dssp SHH-HHHHHHHTTCSEEEEES------CCHHHHHHHHHHHTTSSEEEEESSCCHHHHHHHHTTTCSEEECTHH
T ss_pred CHH-HHHHHHHcCCCEEEECC------CCHHHHHHHHHHhCCCCeEEEECCCCHHHHHHHHHcCCCEEEECce
Confidence 443 34555556899987721 2455666555443 68999999999999999997 999999984
No 194
>3m9y_A Triosephosphate isomerase; TIM barrel, glycolysis, gluconeogenesis, pentose; HET: CIT; 1.90A {Staphylococcus aureus} SCOP: c.1.1.1 PDB: 3uwv_A* 3uwu_A* 3uww_A* 3uwy_A 3uwz_A*
Probab=92.86 E-value=0.1 Score=45.34 Aligned_cols=31 Identities=26% Similarity=0.477 Sum_probs=27.8
Q ss_pred CCCEEEecCCChHhHHHhhc---CCEEEEeceEe
Q psy9039 214 DLPILIGSGVTSDNVEHYMT---ADALIIGSHFK 244 (251)
Q Consensus 214 ~~PV~vG~GI~~~~v~~~~~---ADGvIVGS~~~ 244 (251)
+++|+-||+++++|+.+++. .||+.||++-.
T Consensus 208 ~~rIlYGGSV~~~N~~~l~~~~diDG~LVGgASL 241 (254)
T 3m9y_A 208 ATRIQYGGSVKPNNIKEYMAQTDIDGALVGGASL 241 (254)
T ss_dssp TSEEEECSCCCTTTHHHHHTSTTCCEEEESGGGS
T ss_pred CccEEEcCCcCHHHHHHHHcCCCCCeEEeeHHhh
Confidence 58999999999999999983 99999998643
No 195
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=92.83 E-value=0.13 Score=48.65 Aligned_cols=63 Identities=22% Similarity=0.280 Sum_probs=48.1
Q ss_pred HHHHHhhhccccEEEecCCCCCCCC-CHHHHHHHHhcC-CCCEEEecCCChHhHHHhhc--CCEEEEe
Q psy9039 177 ETAKAASFFLSDGLIITGNATGDPA-DVSQLMSVKNAV-DLPILIGSGVTSDNVEHYMT--ADALIIG 240 (251)
Q Consensus 177 ~~a~~a~~~~~D~v~VTG~~~g~~~-~~~~l~~vr~~~-~~PV~vG~GI~~~~v~~~~~--ADGvIVG 240 (251)
+.++.....|+|.+.+...+ +... ..+.++++|+.. ++||++|...+.+.++.+.+ ||+++||
T Consensus 234 ~~a~~l~~aG~d~I~id~a~-g~~~~~~~~i~~ir~~~p~~~Vi~g~v~t~e~a~~l~~aGaD~I~Vg 300 (496)
T 4fxs_A 234 ERVKALVEAGVDVLLIDSSH-GHSEGVLQRIRETRAAYPHLEIIGGNVATAEGARALIEAGVSAVKVG 300 (496)
T ss_dssp HHHHHHHHTTCSEEEEECSC-TTSHHHHHHHHHHHHHCTTCCEEEEEECSHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHhccCceEEecccc-ccchHHHHHHHHHHHHCCCceEEEcccCcHHHHHHHHHhCCCEEEEC
Confidence 33444444699999997665 3322 247899999987 89999987779999998886 9999997
No 196
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=92.78 E-value=0.14 Score=48.32 Aligned_cols=64 Identities=20% Similarity=0.254 Sum_probs=47.9
Q ss_pred HHHHHHhhhccccEEEecCCCCCCCC-CHHHHHHHHhcC-CCCEEEecCCChHhHHHhhc--CCEEEEe
Q psy9039 176 TETAKAASFFLSDGLIITGNATGDPA-DVSQLMSVKNAV-DLPILIGSGVTSDNVEHYMT--ADALIIG 240 (251)
Q Consensus 176 ~~~a~~a~~~~~D~v~VTG~~~g~~~-~~~~l~~vr~~~-~~PV~vG~GI~~~~v~~~~~--ADGvIVG 240 (251)
.+.++.....|+|.+.+...+ +... ..+.++++|+.. ++||++|...+.+.++.+.+ ||++.||
T Consensus 231 ~~~a~~l~~aG~d~I~id~a~-g~~~~~~~~v~~i~~~~p~~~Vi~g~v~t~e~a~~l~~aGaD~I~vg 298 (490)
T 4avf_A 231 GERVAALVAAGVDVVVVDTAH-GHSKGVIERVRWVKQTFPDVQVIGGNIATAEAAKALAEAGADAVKVG 298 (490)
T ss_dssp HHHHHHHHHTTCSEEEEECSC-CSBHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHhhcccceEEecccC-CcchhHHHHHHHHHHHCCCceEEEeeeCcHHHHHHHHHcCCCEEEEC
Confidence 344444444699999887554 3332 247899999887 88999987779999988886 9999996
No 197
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=92.65 E-value=0.24 Score=42.16 Aligned_cols=66 Identities=18% Similarity=0.205 Sum_probs=48.8
Q ss_pred CcccHHHHHHHhhhccccEEEecCCCCCCCCCHHHHHHHHhcCCCCEEE------e---cCCCh--HhHHHhhc--CCEE
Q psy9039 171 ADVDITETAKAASFFLSDGLIITGNATGDPADVSQLMSVKNAVDLPILI------G---SGVTS--DNVEHYMT--ADAL 237 (251)
Q Consensus 171 ~~~~i~~~a~~a~~~~~D~v~VTG~~~g~~~~~~~l~~vr~~~~~PV~v------G---~GI~~--~~v~~~~~--ADGv 237 (251)
+...+.++|+.++..|+.++.++ ..+.|+++|+.+++||+- | +=|++ +++.+++. ||.+
T Consensus 34 ~~~~~~~~A~a~~~~Ga~~i~~~--------~~~~i~~ir~~v~~Pvig~~k~d~~~~~~~I~~~~~~i~~~~~~Gad~V 105 (232)
T 3igs_A 34 KPEIVAAMALAAEQAGAVAVRIE--------GIDNLRMTRSLVSVPIIGIIKRDLDESPVRITPFLDDVDALAQAGAAII 105 (232)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEE--------SHHHHHHHHTTCCSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTCSEE
T ss_pred CcchHHHHHHHHHHCCCeEEEEC--------CHHHHHHHHHhcCCCEEEEEeecCCCcceEeCccHHHHHHHHHcCCCEE
Confidence 34566777777777899988762 378899999999999951 1 22454 67888876 9999
Q ss_pred EEeceEe
Q psy9039 238 IIGSHFK 244 (251)
Q Consensus 238 IVGS~~~ 244 (251)
++++...
T Consensus 106 ~l~~~~~ 112 (232)
T 3igs_A 106 AVDGTAR 112 (232)
T ss_dssp EEECCSS
T ss_pred EECcccc
Confidence 9998753
No 198
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=92.63 E-value=0.69 Score=40.91 Aligned_cols=163 Identities=12% Similarity=0.153 Sum_probs=82.7
Q ss_pred HHHHhhCCCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeCChHHHHHHHHHcC
Q psy9039 36 AEIRKVLPPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQILSGCNKAALATAQAAG 115 (251)
Q Consensus 36 ~~a~~~a~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~~~~~~ia~a~g 115 (251)
+.+++.++.+++.|+ |.|-|-=+-.-|...++ +..+-.+-+..+++++++.++ +|+.+..+.. ..+..|...|
T Consensus 63 ~~a~~~a~~~v~~GA-diIDIGgeStrPga~~v-~~~eE~~RvvpvI~~l~~~~~--vpiSIDT~~~---~V~~aAl~aG 135 (297)
T 1tx2_A 63 DAAVRHAKEMRDEGA-HIIDIGGESTRPGFAKV-SVEEEIKRVVPMIQAVSKEVK--LPISIDTYKA---EVAKQAIEAG 135 (297)
T ss_dssp HHHHHHHHHHHHTTC-SEEEEESCC----CCCC-CHHHHHHHHHHHHHHHHHHSC--SCEEEECSCH---HHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCC-CEEEECCCcCCCCCCCC-CHHHHHHHHHHHHHHHHhcCC--ceEEEeCCCH---HHHHHHHHcC
Confidence 555666677888999 99987333333554443 222332333345588888777 8999999853 3344444458
Q ss_pred ccceecccccccccCCCceeecCcchhHHHHHhcCCCcchhhhhhHhhccCCCCCCc------ccHHHHHHHhhhcccc-
Q psy9039 116 LDFIRAESFVFGHMADEGLMNAQAGPLLRYRKQIGADNVLVFTDIKKKHSSHAITAD------VDITETAKAASFFLSD- 188 (251)
Q Consensus 116 ~~Fir~~~~~~~~~~~~Gli~~da~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~------~~i~~~a~~a~~~~~D- 188 (251)
++.+-.- .|.- ...+..+..+++++.-|-+-. .|.|. ..+ .-+.+..+.+..+|++
T Consensus 136 a~iINdv---------sg~~--~d~~m~~~aa~~g~~vVlmh~-----~G~p~-y~d~v~ev~~~l~~~i~~a~~~GI~~ 198 (297)
T 1tx2_A 136 AHIINDI---------WGAK--AEPKIAEVAAHYDVPIILMHN-----RDNMN-YRNLMADMIADLYDSIKIAKDAGVRD 198 (297)
T ss_dssp CCEEEET---------TTTS--SCTHHHHHHHHHTCCEEEECC-----CSCCC-CSSHHHHHHHHHHHHHHHHHHTTCCG
T ss_pred CCEEEEC---------CCCC--CCHHHHHHHHHhCCcEEEEeC-----CCCCC-cchHHHHHHHHHHHHHHHHHHcCCCh
Confidence 8887641 1110 123566777777763322210 12221 011 1122222333335654
Q ss_pred --EEEecCCCCCCC--CCHHHHHHHHhc--CCCCEEEecC
Q psy9039 189 --GLIITGNATGDP--ADVSQLMSVKNA--VDLPILIGSG 222 (251)
Q Consensus 189 --~v~VTG~~~g~~--~~~~~l~~vr~~--~~~PV~vG~G 222 (251)
-++=.|...+.. .+++.++++++. ...|+++|-.
T Consensus 199 ~~IilDPg~Gfgk~~~~n~~ll~~l~~l~~lg~Pvl~G~S 238 (297)
T 1tx2_A 199 ENIILDPGIGFAKTPEQNLEAMRNLEQLNVLGYPVLLGTS 238 (297)
T ss_dssp GGEEEECCTTSSCCHHHHHHHHHTGGGGGGGCSCBEEECT
T ss_pred hcEEEeCCCCcCCCHHHHHHHHHHHHHHHhCCCCEEEEec
Confidence 333344433222 124556655543 4799999864
No 199
>1w5q_A Delta-aminolevulinic acid dehydratase; synthase, evolution, metalloenzyme, porphobilinogen synthase, protein engineering,; 1.4A {Pseudomonas aeruginosa} PDB: 1w5p_A* 1w5o_A 1w5n_A 1w56_A 1w5m_A 1w54_A 1gzg_A* 1b4k_A 2woq_A* 2c14_A* 2c16_A* 2c19_A* 2c15_A* 2c18_A* 2c13_A*
Probab=92.51 E-value=1 Score=40.31 Aligned_cols=31 Identities=16% Similarity=0.250 Sum_probs=24.0
Q ss_pred ccccEEEecCCCCCCCCCHHHHHHHHhcCCCCEEE
Q psy9039 185 FLSDGLIITGNATGDPADVSQLMSVKNAVDLPILI 219 (251)
Q Consensus 185 ~~~D~v~VTG~~~g~~~~~~~l~~vr~~~~~PV~v 219 (251)
-|+|.+.|- .+ -+-++.++++|+.+++|+.+
T Consensus 252 EGAD~vMVK---Pa-l~YLDIir~vk~~~~~Pvaa 282 (337)
T 1w5q_A 252 EGADMVMVK---PG-MPYLDIVRRVKDEFRAPTFV 282 (337)
T ss_dssp TTCSEEEEE---SC-GGGHHHHHHHHHHHCSCEEE
T ss_pred hCCCEEEEc---CC-CchHHHHHHHHHhcCCCEEE
Confidence 499999883 22 22368899999999999986
No 200
>1hg3_A Triosephosphate isomerase; thermostability, tetrameric; 2.7A {Pyrococcus woesei} SCOP: c.1.1.1
Probab=92.47 E-value=0.044 Score=46.76 Aligned_cols=41 Identities=15% Similarity=0.283 Sum_probs=31.1
Q ss_pred HHHhcC-CCCEEEecCCChHhHHHhhc---CCEEEEeceEeecCe
Q psy9039 208 SVKNAV-DLPILIGSGVTSDNVEHYMT---ADALIIGSHFKQGGR 248 (251)
Q Consensus 208 ~vr~~~-~~PV~vG~GI~~~~v~~~~~---ADGvIVGS~~~~~g~ 248 (251)
.+|+.. +++++.||||++.|..+++. +||+-||+++.+-.+
T Consensus 169 ~ir~~~~~~~ilyggsV~~~n~~~~~~~~~vDG~LVG~a~l~a~~ 213 (225)
T 1hg3_A 169 LVKKVNPEVKVLCGAGISTGEDVKKAIELGTVGVLLASGVTKAKD 213 (225)
T ss_dssp HHHHHCTTSEEEEESSCCSHHHHHHHHHTTCSEEEESHHHHTCSS
T ss_pred HHHhccCCCEEEEeCCCCcHHHHHHHHhCCCCEEEeCHHHHCCcC
Confidence 344443 68999999998777666553 999999999877543
No 201
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=92.41 E-value=0.39 Score=42.14 Aligned_cols=100 Identities=10% Similarity=0.058 Sum_probs=52.7
Q ss_pred hHHHHHHHHHhhCCCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeCChHHHHH
Q psy9039 30 NMTRLCAEIRKVLPPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQILSGCNKAALA 109 (251)
Q Consensus 30 ~~~~i~~~a~~~a~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~~~~~~ 109 (251)
+.+.+++++ +.+++.|+ |.|-|-=+-..|...++ +..+-..-+..+++++++. + +|+.+.++.. ..+.
T Consensus 27 ~~~~a~~~a----~~~v~~GA-diIDIGgestrpga~~v-~~~eE~~Rv~pvi~~l~~~-~--~piSIDT~~~---~va~ 94 (280)
T 1eye_A 27 DLDDAVKHG----LAMAAAGA-GIVDVGGESSRPGATRV-DPAVETSRVIPVVKELAAQ-G--ITVSIDTMRA---DVAR 94 (280)
T ss_dssp SHHHHHHHH----HHHHHTTC-SEEEEECC---------------HHHHHHHHHHHHHT-T--CCEEEECSCH---HHHH
T ss_pred CHHHHHHHH----HHHHHCCC-CEEEECCccCCCCCCCC-CHHHHHHHHHHHHHHhhcC-C--CEEEEeCCCH---HHHH
Confidence 455554444 55778999 99987322223444443 2233333344466777765 5 7999999853 3355
Q ss_pred HHHHcCccceecccccccccCCCceeecCcchhHHHHHhcCCC
Q psy9039 110 TAQAAGLDFIRAESFVFGHMADEGLMNAQAGPLLRYRKQIGAD 152 (251)
Q Consensus 110 ia~a~g~~Fir~~~~~~~~~~~~Gli~~da~e~~~~r~~l~~~ 152 (251)
.|...|++.+-.- .|.- ...+..+..+++++.
T Consensus 95 aAl~aGa~iINdv---------sg~~--~d~~m~~~~a~~~~~ 126 (280)
T 1eye_A 95 AALQNGAQMVNDV---------SGGR--ADPAMGPLLAEADVP 126 (280)
T ss_dssp HHHHTTCCEEEET---------TTTS--SCTTHHHHHHHHTCC
T ss_pred HHHHcCCCEEEEC---------CCCC--CCHHHHHHHHHhCCe
Confidence 5556688887641 1111 123567777888873
No 202
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=92.40 E-value=0.16 Score=46.36 Aligned_cols=63 Identities=22% Similarity=0.296 Sum_probs=46.0
Q ss_pred HHHHHhhhccccEEEecCCCCCCCCC-HHHHHHHHhcC-CCCEEEecCCChHhHHHhhc--CCEEEEe
Q psy9039 177 ETAKAASFFLSDGLIITGNATGDPAD-VSQLMSVKNAV-DLPILIGSGVTSDNVEHYMT--ADALIIG 240 (251)
Q Consensus 177 ~~a~~a~~~~~D~v~VTG~~~g~~~~-~~~l~~vr~~~-~~PV~vG~GI~~~~v~~~~~--ADGvIVG 240 (251)
+.++.+...++|.+.++-.+ +.+.. .+.++++|+.. ++||++|...|++.+.++.+ ||++.||
T Consensus 111 ~~~~~lieaGvd~I~idta~-G~~~~~~~~I~~ik~~~p~v~Vi~G~v~t~e~A~~a~~aGAD~I~vG 177 (366)
T 4fo4_A 111 ERVKALVEAGVDVLLIDSSH-GHSEGVLQRIRETRAAYPHLEIIGGNVATAEGARALIEAGVSAVKVG 177 (366)
T ss_dssp HHHHHHHHTTCSEEEEECSC-TTSHHHHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHhCCCCEEEEeCCC-CCCHHHHHHHHHHHHhcCCCceEeeeeCCHHHHHHHHHcCCCEEEEe
Confidence 33455555689999884332 22222 36688888886 89999988779999998886 9999995
No 203
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=92.37 E-value=0.32 Score=43.53 Aligned_cols=98 Identities=18% Similarity=0.167 Sum_probs=54.1
Q ss_pred HHHHHhhCCCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeCChHHHHHHHHHc
Q psy9039 35 CAEIRKVLPPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQILSGCNKAALATAQAA 114 (251)
Q Consensus 35 ~~~a~~~a~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~~~~~~ia~a~ 114 (251)
.+.+++.++.+++.|+ |.|-|-=+-.-|- .++ +..+-.+-+..+++++++.+++ +|+.|.+|.. ..+..|...
T Consensus 64 ~~~a~~~A~~~v~~GA-dIIDIGgeSTrPG-~~v-~~~eEl~Rv~pvI~~l~~~~~~-vpISIDT~~~---~VaeaAl~a 136 (318)
T 2vp8_A 64 DAAARDAVHRAVADGA-DVIDVGGVKAGPG-ERV-DVDTEITRLVPFIEWLRGAYPD-QLISVDTWRA---QVAKAACAA 136 (318)
T ss_dssp CHHHHHHHHHHHHTTC-SEEEEC------------CHHHHHHHHHHHHHHHHHHSTT-CEEEEECSCH---HHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCC-CEEEECCCcCCCC-CCC-CHHHHHHHHHHHHHHHHhhCCC-CeEEEeCCCH---HHHHHHHHh
Confidence 3455555567888999 9997611111133 222 1222222233357888888722 7999999863 334444556
Q ss_pred CccceecccccccccCCCceeecCcchhHHHHHhcCC
Q psy9039 115 GLDFIRAESFVFGHMADEGLMNAQAGPLLRYRKQIGA 151 (251)
Q Consensus 115 g~~Fir~~~~~~~~~~~~Gli~~da~e~~~~r~~l~~ 151 (251)
|++.+-. ..|.- ..+..+..+++++
T Consensus 137 Ga~iIND---------Vsg~~---d~~m~~vaa~~g~ 161 (318)
T 2vp8_A 137 GADLIND---------TWGGV---DPAMPEVAAEFGA 161 (318)
T ss_dssp TCCEEEE---------TTSSS---STTHHHHHHHHTC
T ss_pred CCCEEEE---------CCCCC---chHHHHHHHHhCC
Confidence 8888764 12221 2356777778876
No 204
>1mo0_A TIM, triosephosphate isomerase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; 1.70A {Caenorhabditis elegans} SCOP: c.1.1.1
Probab=92.37 E-value=0.11 Score=45.67 Aligned_cols=32 Identities=25% Similarity=0.404 Sum_probs=28.4
Q ss_pred CCCEEEecCCChHhHHHhhc---CCEEEEeceEee
Q psy9039 214 DLPILIGSGVTSDNVEHYMT---ADALIIGSHFKQ 245 (251)
Q Consensus 214 ~~PV~vG~GI~~~~v~~~~~---ADGvIVGS~~~~ 245 (251)
+++|+-||+|+++|+.+++. .||+-||++-.+
T Consensus 222 ~vrILYGGSV~~~N~~el~~~~diDG~LVGgASLk 256 (275)
T 1mo0_A 222 ATRIIYGGSVTADNAAELGKKPDIDGFLVGGASLK 256 (275)
T ss_dssp HSCEEEESSCCTTTHHHHTTSTTCCEEEESGGGGS
T ss_pred cccEEEcCCCCHhhHHHHhcCCCCCeeEechHHhC
Confidence 48999999999999999994 999999987543
No 205
>1r2r_A TIM, triosephosphate isomerase; closed loop conformation in the ligand-free state, conformational heterogeneity, TIM-barrel; 1.50A {Oryctolagus cuniculus} SCOP: c.1.1.1 PDB: 1r2s_A 1r2t_A 2jk2_A 1wyi_A 1hti_A 2vom_A 1tph_1* 8tim_A 1sw3_A 1spq_A 1tpb_1* 1tpw_A* 1sw7_A 1tpu_A* 1tpc_1* 1ssd_A 1ssg_A 1sw0_A 1sq7_A 1tpv_A* ...
Probab=92.31 E-value=0.1 Score=45.09 Aligned_cols=32 Identities=19% Similarity=0.384 Sum_probs=28.4
Q ss_pred CCCEEEecCCChHhHHHhhc---CCEEEEeceEee
Q psy9039 214 DLPILIGSGVTSDNVEHYMT---ADALIIGSHFKQ 245 (251)
Q Consensus 214 ~~PV~vG~GI~~~~v~~~~~---ADGvIVGS~~~~ 245 (251)
+++|+-||+++++|+.+++. .||+-||++-.+
T Consensus 203 ~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgAsL~ 237 (248)
T 1r2r_A 203 STRIIYGGSVTGATCKELASQPDVDGFLVGGASLK 237 (248)
T ss_dssp HCCEEECSCCCTTTHHHHHTSTTCCEEEESGGGGS
T ss_pred cccEEEcCCcCHhHHHHHHcCCCCCeeEechHHhC
Confidence 48999999999999999994 999999987544
No 206
>4djd_D C/Fe-SP, corrinoid/iron-sulfur protein small subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_D* 4djf_D*
Probab=92.31 E-value=0.62 Score=41.76 Aligned_cols=65 Identities=12% Similarity=0.034 Sum_probs=44.1
Q ss_pred CcchHHHHHHHHHhhCCCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeC
Q psy9039 27 ITANMTRLCAEIRKVLPPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQILSG 102 (251)
Q Consensus 27 ~~~~~~~i~~~a~~~a~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N 102 (251)
|+...+.+.++|++-. .+.|+ |.|-|-++-.-|...+ +..+-+.+.++++++.++ +|+.|..--|
T Consensus 75 ~~~~~~~~~~~A~~~v---~~~GA-diIDIg~eStrP~~~~-----vs~ee~~~~V~~v~~~~~--vPlsIDg~~~ 139 (323)
T 4djd_D 75 FTDVINEPGRWAQKCV---AEYGA-DLIYLKLDGADPEGAN-----HSVDQCVATVKEVLQAVG--VPLVVVGCGD 139 (323)
T ss_dssp GTTTTTCHHHHHHHHH---HTTCC-SEEEEECGGGCTTTTC-----CCHHHHHHHHHHHHHHCC--SCEEEECCSC
T ss_pred HHHHHHhHHHHHHHHH---HHcCC-CEEEEcCccCCCCCCC-----CCHHHHHHHHHHHHhhCC--ceEEEECCCC
Confidence 3334455666666554 38899 9999877766666544 233337778899998888 8999994333
No 207
>2i9e_A Triosephosphate isomerase; 2.00A {Tenebrio molitor}
Probab=92.31 E-value=0.093 Score=45.73 Aligned_cols=32 Identities=22% Similarity=0.413 Sum_probs=28.4
Q ss_pred CCCEEEecCCChHhHHHhhc---CCEEEEeceEee
Q psy9039 214 DLPILIGSGVTSDNVEHYMT---ADALIIGSHFKQ 245 (251)
Q Consensus 214 ~~PV~vG~GI~~~~v~~~~~---ADGvIVGS~~~~ 245 (251)
+++|+-||+++++|+.+++. .||+-||++-.+
T Consensus 202 ~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgAsL~ 236 (259)
T 2i9e_A 202 SIRIQYGGSVTAANCKELASQPDIDGFLVGGASLK 236 (259)
T ss_dssp HCEEEECSCCCTTTHHHHHTSTTCCEEEESGGGGS
T ss_pred cccEEEcCCCCHhhHHHHhcCCCCCeeeechHhhC
Confidence 48999999999999999994 999999987544
No 208
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=92.29 E-value=0.15 Score=43.93 Aligned_cols=83 Identities=13% Similarity=0.044 Sum_probs=54.2
Q ss_pred hhhhhhHhhccCCC--CCCcccHHHHHHHhhhccccEEEecCCCCCCCCCH-HHHHHHHhcC-CCCEEEecCCChHhHHH
Q psy9039 155 LVFTDIKKKHSSHA--ITADVDITETAKAASFFLSDGLIITGNATGDPADV-SQLMSVKNAV-DLPILIGSGVTSDNVEH 230 (251)
Q Consensus 155 ~i~a~v~~k~~~~~--~~~~~~i~~~a~~a~~~~~D~v~VTG~~~g~~~~~-~~l~~vr~~~-~~PV~vG~GI~~~~v~~ 230 (251)
.+++.+...+|... ...+.+.+++.+.+....+|.+++|...+...+.+ +.++++|+.. ++||++||....+...+
T Consensus 141 ~iva~~L~~~G~~Vi~LG~~vp~e~l~~~~~~~~~d~V~lS~l~~~~~~~~~~~i~~l~~~~~~~~v~vGG~~~~~~~~~ 220 (258)
T 2i2x_B 141 NIVTALLRANGYNVVDLGRDVPAEEVLAAVQKEKPIMLTGTALMTTTMYAFKEVNDMLLENGIKIPFACGGGAVNQDFVS 220 (258)
T ss_dssp HHHHHHHHHTTCEEEEEEEECCSHHHHHHHHHHCCSEEEEECCCTTTTTHHHHHHHHHHTTTCCCCEEEESTTCCHHHHH
T ss_pred HHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEEeeccCCHHHHHHHHHHHHhcCCCCcEEEECccCCHHHHH
Confidence 44555555555443 22346677887777778999999999866555444 5677888764 79999999884333433
Q ss_pred hhcCCEE
Q psy9039 231 YMTADAL 237 (251)
Q Consensus 231 ~~~ADGv 237 (251)
.+.||+.
T Consensus 221 ~igad~~ 227 (258)
T 2i2x_B 221 QFALGVY 227 (258)
T ss_dssp TSTTEEE
T ss_pred HcCCeEE
Confidence 3336554
No 209
>2vxn_A Triosephosphate isomerase; fatty acid biosynthesis, transition state analogue, glycolysis, pentose shunt, gluconeogenesis, TIM, glycosome; HET: PGH PGA; 0.82A {Leishmania mexicana} PDB: 1if2_A* 1qds_A 1n55_A* 2y61_A 2y62_A 2y63_A 1amk_A 1tpf_A 1iig_A 1ag1_O* 1iih_A 1tpd_A 1trd_A* 2v5l_A 4tim_A* 5tim_A 6tim_A*
Probab=92.23 E-value=0.07 Score=46.28 Aligned_cols=32 Identities=22% Similarity=0.414 Sum_probs=28.8
Q ss_pred CCCEEEecCCChHhHHHhhc---CCEEEEeceEee
Q psy9039 214 DLPILIGSGVTSDNVEHYMT---ADALIIGSHFKQ 245 (251)
Q Consensus 214 ~~PV~vG~GI~~~~v~~~~~---ADGvIVGS~~~~ 245 (251)
+++|+-||+++++|+.+++. .||+-||++-.+
T Consensus 206 ~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgAsL~ 240 (251)
T 2vxn_A 206 KLRILYGGSVNAANAATLYAKPDINGFLVGGASLK 240 (251)
T ss_dssp HCEEEEESSCCTTTHHHHHTSTTCCEEEESGGGGS
T ss_pred cccEEEcCCcCHhHHHHHhcCCCCCeeeecHHHHH
Confidence 48999999999999999994 999999988655
No 210
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=92.22 E-value=0.19 Score=44.20 Aligned_cols=65 Identities=12% Similarity=0.116 Sum_probs=44.6
Q ss_pred HHHHHhhhccccEEEecCCCCCCCCCH-HHHHHHHhc-CCCCEEEecCCChHhHHHhhc--CCEEEEeceEe
Q psy9039 177 ETAKAASFFLSDGLIITGNATGDPADV-SQLMSVKNA-VDLPILIGSGVTSDNVEHYMT--ADALIIGSHFK 244 (251)
Q Consensus 177 ~~a~~a~~~~~D~v~VTG~~~g~~~~~-~~l~~vr~~-~~~PV~vG~GI~~~~v~~~~~--ADGvIVGS~~~ 244 (251)
+.++.+...|+|.+..=-.. +.++ +.++.+++. ..+++.+.||||++|++++.. +|++.||+.+.
T Consensus 205 eea~eal~aGaD~I~LDn~~---~~~~~~~v~~l~~~~~~v~ieaSGGIt~~~i~~~a~tGVD~isvG~l~~ 273 (284)
T 1qpo_A 205 EQLDAVLPEKPELILLDNFA---VWQTQTAVQRRDSRAPTVMLESSGGLSLQTAATYAETGVDYLAVGALTH 273 (284)
T ss_dssp HHHHHHGGGCCSEEEEETCC---HHHHHHHHHHHHHHCTTCEEEEESSCCTTTHHHHHHTTCSEEECGGGTS
T ss_pred HHHHHHHHcCCCEEEECCCC---HHHHHHHHHHhhccCCCeEEEEECCCCHHHHHHHHhcCCCEEEECHHHc
Confidence 44566665789987664311 1122 234445542 258999999999999999996 99999999553
No 211
>2yc6_A Triosephosphate isomerase; glycolysis; HET: PGA; 1.45A {Giardia intestinalis} PDB: 2dp3_A 2yc7_A* 3pf3_A 2yc8_A
Probab=92.20 E-value=0.071 Score=46.39 Aligned_cols=31 Identities=19% Similarity=0.358 Sum_probs=28.1
Q ss_pred CCCEEEecCCChHhHHHhhc---CCEEEEeceEe
Q psy9039 214 DLPILIGSGVTSDNVEHYMT---ADALIIGSHFK 244 (251)
Q Consensus 214 ~~PV~vG~GI~~~~v~~~~~---ADGvIVGS~~~ 244 (251)
+++|+-||+++++|+.+++. .||+.||++-.
T Consensus 208 ~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgAsL 241 (257)
T 2yc6_A 208 HIRIIYGGSANGSNNEKLGQCPNIDGFLVGGASL 241 (257)
T ss_dssp TCEEEEESSCCTTTHHHHHTSTTCCEEEESGGGG
T ss_pred cceEEEcCccCHHHHHHHHcCCCCCeeeecHHHH
Confidence 68999999999999999994 99999998754
No 212
>2j27_A Triosephosphate isomerase glycosomal; TIM, 2PG, LOOP7, glycosome, TIM-barrel, gluconeogenesis, lipid synthesis, atomic resolution; 1.15A {Trypanosoma brucei brucei} PDB: 2j24_A 1kv5_A 1tpe_A 1tsi_A* 3tim_A 2v2c_A 2v0t_A 1tri_A 1tti_A 1mss_A 1ttj_A* 2wsq_A 2y70_A 2y6z_A* 1ml1_A 2wsr_A 3q37_A 2v2h_A 2v2d_A 1dkw_A ...
Probab=92.18 E-value=0.08 Score=45.89 Aligned_cols=32 Identities=22% Similarity=0.445 Sum_probs=28.8
Q ss_pred CCCEEEecCCChHhHHHhhc---CCEEEEeceEee
Q psy9039 214 DLPILIGSGVTSDNVEHYMT---ADALIIGSHFKQ 245 (251)
Q Consensus 214 ~~PV~vG~GI~~~~v~~~~~---ADGvIVGS~~~~ 245 (251)
+++|+-||+++++|+++++. .||+-||++-.+
T Consensus 205 ~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgAsL~ 239 (250)
T 2j27_A 205 ELRILYGGSVNGKNARTLYQQRDVNGFLVGGASLK 239 (250)
T ss_dssp HCCEEEESSCCTTTHHHHHTSTTCCEEEESGGGGS
T ss_pred cccEEEcCCCCHHHHHHHHcCCCCCeeeeehHHHH
Confidence 48999999999999999993 999999988655
No 213
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=92.16 E-value=0.16 Score=46.35 Aligned_cols=65 Identities=17% Similarity=0.089 Sum_probs=46.3
Q ss_pred HHHHHHHhhhccccEEEecCCCCCCCCC-HHHHHHHHhcC-CCCEEEecCCChHhHHHhhc--CCEEEEe
Q psy9039 175 ITETAKAASFFLSDGLIITGNATGDPAD-VSQLMSVKNAV-DLPILIGSGVTSDNVEHYMT--ADALIIG 240 (251)
Q Consensus 175 i~~~a~~a~~~~~D~v~VTG~~~g~~~~-~~~l~~vr~~~-~~PV~vG~GI~~~~v~~~~~--ADGvIVG 240 (251)
..+.++.+...|+|.+.+.... |.... .+.++++|+.. ++||++|.-.|++.+..+.+ ||++.||
T Consensus 101 ~~e~~~~a~~aGvdvI~id~a~-G~~~~~~e~I~~ir~~~~~~~Vi~G~V~T~e~A~~a~~aGaD~I~Vg 169 (361)
T 3r2g_A 101 ELQRAEALRDAGADFFCVDVAH-AHAKYVGKTLKSLRQLLGSRCIMAGNVATYAGADYLASCGADIIKAG 169 (361)
T ss_dssp HHHHHHHHHHTTCCEEEEECSC-CSSHHHHHHHHHHHHHHTTCEEEEEEECSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHHcCCCEEEEeCCC-CCcHhHHHHHHHHHHhcCCCeEEEcCcCCHHHHHHHHHcCCCEEEEc
Confidence 3444555555689988774332 33222 46788999886 79999875558999988886 9999996
No 214
>2v5b_A Triosephosphate isomerase; TIM, unfolding, monotctim, glycosome, gluconeogenesis, lipid synthesis, monomeric mutant, glycolysis, pentose shunt; 2.00A {Trypanosoma cruzi}
Probab=92.12 E-value=0.058 Score=46.63 Aligned_cols=30 Identities=27% Similarity=0.481 Sum_probs=27.1
Q ss_pred CCCEEEecCCChHhHHHhhc---CCEEEEeceE
Q psy9039 214 DLPILIGSGVTSDNVEHYMT---ADALIIGSHF 243 (251)
Q Consensus 214 ~~PV~vG~GI~~~~v~~~~~---ADGvIVGS~~ 243 (251)
+++|+-||+++++|+++++. .||+.||.+=
T Consensus 199 ~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgAS 231 (244)
T 2v5b_A 199 QLRILYGGSVTAKNARTLYQMRDINGFLVGGAS 231 (244)
T ss_dssp HCEEEECSCCCHHHHHHHHTSTTCCEEEESGGG
T ss_pred cccEEEcCCCCHhHHHHHhcCCCCCeeeechHH
Confidence 48999999999999999994 9999999653
No 215
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=92.11 E-value=0.27 Score=40.67 Aligned_cols=82 Identities=12% Similarity=0.138 Sum_probs=53.6
Q ss_pred hhhhhhHhhccCCC--CCCcccHHHHHHHhhhccccEEEecCCCCCCCCCH-HHHHHHHhcC---CCCEEEecCC-ChHh
Q psy9039 155 LVFTDIKKKHSSHA--ITADVDITETAKAASFFLSDGLIITGNATGDPADV-SQLMSVKNAV---DLPILIGSGV-TSDN 227 (251)
Q Consensus 155 ~i~a~v~~k~~~~~--~~~~~~i~~~a~~a~~~~~D~v~VTG~~~g~~~~~-~~l~~vr~~~---~~PV~vG~GI-~~~~ 227 (251)
.+++.....+|... ...+.+.+++.+.+....+|.+++|...+...+.+ +.++++|+.. ++||++||.. +++-
T Consensus 106 ~~va~~l~~~G~~v~~LG~~vp~~~l~~~~~~~~~d~v~lS~~~~~~~~~~~~~i~~l~~~~~~~~~~v~vGG~~~~~~~ 185 (210)
T 1y80_A 106 NLVAMMLESGGFTVYNLGVDIEPGKFVEAVKKYQPDIVGMSALLTTTMMNMKSTIDALIAAGLRDRVKVIVGGAPLSQDF 185 (210)
T ss_dssp HHHHHHHHHTTCEEEECCSSBCHHHHHHHHHHHCCSEEEEECCSGGGTHHHHHHHHHHHHTTCGGGCEEEEESTTCCHHH
T ss_pred HHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHhcCCCCCCeEEEECCCCCHHH
Confidence 44444444544332 24457788888888777999999999765443334 5577888763 4999999988 5543
Q ss_pred HHHhhcCCEE
Q psy9039 228 VEHYMTADAL 237 (251)
Q Consensus 228 v~~~~~ADGv 237 (251)
. +.+.||+.
T Consensus 186 ~-~~~gad~~ 194 (210)
T 1y80_A 186 A-DEIGADGY 194 (210)
T ss_dssp H-HHHTCSEE
T ss_pred H-HHcCCeEE
Confidence 3 33347753
No 216
>1m6j_A TIM, TPI, triosephosphate isomerase; asymmetry, monomer stability; 1.50A {Entamoeba histolytica} SCOP: c.1.1.1
Probab=92.07 E-value=0.12 Score=45.14 Aligned_cols=32 Identities=19% Similarity=0.310 Sum_probs=28.3
Q ss_pred CCCEEEecCCChHhHHHhhc---CCEEEEeceEee
Q psy9039 214 DLPILIGSGVTSDNVEHYMT---ADALIIGSHFKQ 245 (251)
Q Consensus 214 ~~PV~vG~GI~~~~v~~~~~---ADGvIVGS~~~~ 245 (251)
+++|+-||+++++|+.+++. .||+.||++-.+
T Consensus 212 ~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgAsL~ 246 (261)
T 1m6j_A 212 ATRIQYGGSVNPANCNELAKKADIDGFLVGGASLD 246 (261)
T ss_dssp HSCEEECSCCCTTTHHHHHTSTTCCEEEESGGGGS
T ss_pred cccEEEcCCcCHhhHHHHhcCCCCCeeEecHHHhC
Confidence 48999999999999999994 999999987543
No 217
>3mcm_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase/dihydropteroate...; folate, TIM barrel, synthase, HPPK, DHPS; 2.20A {Francisella tularensis subsp} PDB: 3mcn_A* 3mco_A*
Probab=92.03 E-value=0.22 Score=46.53 Aligned_cols=99 Identities=9% Similarity=-0.041 Sum_probs=56.9
Q ss_pred HHHHhhCCCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHH---h--CCCCccEEEEEeeCChHHHHHH
Q psy9039 36 AEIRKVLPPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRK---V--LPPSVPVGVQILSGCNKAALAT 110 (251)
Q Consensus 36 ~~a~~~a~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~---~--~~~~~P~Gvn~~~N~~~~~~~i 110 (251)
+.+++.++.+++.|+ |.|-|-=+-..|...++ +..+-.+-+..+++++++ . ++ +|+.|.+|... +...++
T Consensus 212 ~~al~~A~~mv~~GA-dIIDIGgeSTrPGa~~V-s~~EE~~Rv~pvI~~l~~~~~~~~~~--vpISIDT~~~~-VaeaAL 286 (442)
T 3mcm_A 212 NQRKLNLDELIQSGA-EIIDIGAESTKPDAKPI-SIEEEFNKLNEFLEYFKSQLANLIYK--PLVSIDTRKLE-VMQKIL 286 (442)
T ss_dssp CHHHHHHHHHHHHTC-SEEEEECCCCCC----C-CHHHHHHHHHHHHHHHHHHTTTCSSC--CEEEEECCCHH-HHHHHH
T ss_pred HHHHHHHHHHHHCCC-CEEEECCCCCCCCCCCC-CHHHHHHHHHHHHHHHHhhccccCCC--CeEEEeCCCHH-HHHHHH
Confidence 445555677888999 99987333334555443 122222223335788887 3 25 79999998643 555565
Q ss_pred HHHcCccc-eecccccccccCCCceeecCcchhHHHHHhcCC
Q psy9039 111 AQAAGLDF-IRAESFVFGHMADEGLMNAQAGPLLRYRKQIGA 151 (251)
Q Consensus 111 a~a~g~~F-ir~~~~~~~~~~~~Gli~~da~e~~~~r~~l~~ 151 (251)
....|++. +-. ..|. ...+..+..+++++
T Consensus 287 ~~~aGa~i~IND---------Vsg~---~d~~m~~v~a~~g~ 316 (442)
T 3mcm_A 287 AKHHDIIWMIND---------VECN---NIEQKAQLIAKYNK 316 (442)
T ss_dssp HHHGGGCCEEEE---------CCCT---THHHHHHHHHHHTC
T ss_pred hhCCCCCEEEEc---------CCCC---CChHHHHHHHHhCC
Confidence 54578888 664 2221 12356677777776
No 218
>1o5x_A TIM, triosephosphate isomerase; 2- phosphoglycerate, META-phosphate, catalytic LOOP6; HET: 2PG; 1.10A {Plasmodium falciparum} SCOP: c.1.1.1 PDB: 1lzo_A 1m7o_A* 1m7p_A* 1lyx_A* 1ydv_A 2vfi_A* 3psw_A 3psv_A 3pwa_A 2vfh_A* 2vff_A 2vfg_A* 1vga_A 1woa_A* 1wob_A 3pvf_A 3py2_A 2vfd_A 2vfe_A*
Probab=91.95 E-value=0.034 Score=48.23 Aligned_cols=32 Identities=22% Similarity=0.496 Sum_probs=28.8
Q ss_pred CCCEEEecCCChHhHHHhhc---CCEEEEeceEee
Q psy9039 214 DLPILIGSGVTSDNVEHYMT---ADALIIGSHFKQ 245 (251)
Q Consensus 214 ~~PV~vG~GI~~~~v~~~~~---ADGvIVGS~~~~ 245 (251)
+++|+-||+++++|+++++. .||+-||++-.+
T Consensus 203 ~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgAsL~ 237 (248)
T 1o5x_A 203 QIRILYGGSVNTENCSSLIQQEDIDGFLVGNASLK 237 (248)
T ss_dssp HSEEEECSCCCTTTHHHHHTSTTCCEEEECGGGGS
T ss_pred cceEEEcCCCCHHHHHHHHcCCCCCeeEeeHHHHH
Confidence 48999999999999999994 999999988655
No 219
>1b9b_A TIM, protein (triosephosphate isomerase); thermophilic; 2.85A {Thermotoga maritima} SCOP: c.1.1.1
Probab=91.86 E-value=0.052 Score=47.19 Aligned_cols=32 Identities=22% Similarity=0.379 Sum_probs=28.3
Q ss_pred CCCEEEecCCChHhHHHhhc---CCEEEEeceEee
Q psy9039 214 DLPILIGSGVTSDNVEHYMT---ADALIIGSHFKQ 245 (251)
Q Consensus 214 ~~PV~vG~GI~~~~v~~~~~---ADGvIVGS~~~~ 245 (251)
+++|+-||+++++|+.+++. .||+-||++-.+
T Consensus 206 ~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgASLk 240 (255)
T 1b9b_A 206 SIRILYGGSIKPDNFLGLIVQKDIDGGLVGGASLK 240 (255)
T ss_dssp HSEEEEESSCCHHHHTTTSSSTTCCEEEESGGGTS
T ss_pred cceEEEcCcCCHHHHHHHHcCCCCCeeEeehHhhc
Confidence 48999999999999999993 999999987543
No 220
>1aw2_A Triosephosphate isomerase; psychrophilic, vibrio marinus; 2.65A {Moritella marina} SCOP: c.1.1.1 PDB: 1aw1_A
Probab=91.85 E-value=0.11 Score=45.06 Aligned_cols=32 Identities=22% Similarity=0.447 Sum_probs=28.4
Q ss_pred CCCEEEecCCChHhHHHhhc---CCEEEEeceEee
Q psy9039 214 DLPILIGSGVTSDNVEHYMT---ADALIIGSHFKQ 245 (251)
Q Consensus 214 ~~PV~vG~GI~~~~v~~~~~---ADGvIVGS~~~~ 245 (251)
+++|+-||+++++|+.+++. .||+.||++-.+
T Consensus 206 ~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgAsL~ 240 (256)
T 1aw2_A 206 NVVIQYGGSVKPENAAAYFAQPDIDGALVGGAALD 240 (256)
T ss_dssp HCEEEECSCCCTTTHHHHTTSTTCCEEEESGGGGC
T ss_pred cccEEEcCCCCHHHHHHHHcCCCCCeeeecHHHhC
Confidence 48999999999999999994 999999987543
No 221
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=91.79 E-value=0.14 Score=43.04 Aligned_cols=81 Identities=12% Similarity=0.124 Sum_probs=51.8
Q ss_pred hhhhhhHhhccCCC--CCCcccHHHHHHHhhhccccEEEecCCCCC--CCCCH-HHHHHHHhcC---CCCEEEecCC-Ch
Q psy9039 155 LVFTDIKKKHSSHA--ITADVDITETAKAASFFLSDGLIITGNATG--DPADV-SQLMSVKNAV---DLPILIGSGV-TS 225 (251)
Q Consensus 155 ~i~a~v~~k~~~~~--~~~~~~i~~~a~~a~~~~~D~v~VTG~~~g--~~~~~-~~l~~vr~~~---~~PV~vG~GI-~~ 225 (251)
.+++.+...+|... ...+.+.+++.+.+....+|.+++||+..- ....+ +.++++|+.. ++||++||.. ++
T Consensus 110 ~iv~~~l~~~G~~Vi~LG~~vp~e~iv~~~~~~~~d~v~l~~S~l~~~~~~~~~~~i~~l~~~~~~~~v~v~vGG~~~~~ 189 (215)
T 3ezx_A 110 RLVTTMLGANGFQIVDLGVDVLNENVVEEAAKHKGEKVLLVGSALMTTSMLGQKDLMDRLNEEKLRDSVKCMFGGAPVSD 189 (215)
T ss_dssp HHHHHHHHHTSCEEEECCSSCCHHHHHHHHHHTTTSCEEEEEECSSHHHHTHHHHHHHHHHHTTCGGGSEEEEESSSCCH
T ss_pred HHHHHHHHHCCCeEEEcCCCCCHHHHHHHHHHcCCCEEEEEchhcccCcHHHHHHHHHHHHHcCCCCCCEEEEECCCCCH
Confidence 44444444444332 245678888888888889999999554332 22223 5677888774 6999999998 65
Q ss_pred HhHHHhhcCCE
Q psy9039 226 DNVEHYMTADA 236 (251)
Q Consensus 226 ~~v~~~~~ADG 236 (251)
+ .++.+.||+
T Consensus 190 ~-~a~~iGad~ 199 (215)
T 3ezx_A 190 K-WIEEIGADA 199 (215)
T ss_dssp H-HHHHHTCCB
T ss_pred H-HHHHhCCeE
Confidence 4 444444664
No 222
>1ney_A TIM, triosephosphate isomerase; yeast, DHAP, dihydroxyacetone phosphate, michaelis complex; HET: FTR 13P; 1.20A {Saccharomyces cerevisiae} SCOP: c.1.1.1 PDB: 1nf0_A* 1i45_A* 1ypi_A 2ypi_A 7tim_A* 3ypi_A*
Probab=91.69 E-value=0.033 Score=48.24 Aligned_cols=32 Identities=22% Similarity=0.453 Sum_probs=28.8
Q ss_pred CCCEEEecCCChHhHHHhhc---CCEEEEeceEee
Q psy9039 214 DLPILIGSGVTSDNVEHYMT---ADALIIGSHFKQ 245 (251)
Q Consensus 214 ~~PV~vG~GI~~~~v~~~~~---ADGvIVGS~~~~ 245 (251)
+++|+-||+++++|+.+++. .||+-||++-.+
T Consensus 202 ~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgAsL~ 236 (247)
T 1ney_A 202 ELRILYGGSANGSNAVTFKDKADVDGFLVGGASLK 236 (247)
T ss_dssp HCCEEEESSCCTTTGGGGTTCTTCCEEEESGGGGS
T ss_pred cceEEEcCCcCHhHHHHHHcCCCCCeeEeehHHHH
Confidence 48999999999999999994 999999988655
No 223
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=91.50 E-value=0.15 Score=46.19 Aligned_cols=54 Identities=22% Similarity=0.273 Sum_probs=42.3
Q ss_pred cccEEEecCCCCCCCC-CHHHHHHHHhcC-CCCEEEecCCChHhHHHhhc--CCEEEEe
Q psy9039 186 LSDGLIITGNATGDPA-DVSQLMSVKNAV-DLPILIGSGVTSDNVEHYMT--ADALIIG 240 (251)
Q Consensus 186 ~~D~v~VTG~~~g~~~-~~~~l~~vr~~~-~~PV~vG~GI~~~~v~~~~~--ADGvIVG 240 (251)
++|++.++... +... .++.++++|+.+ ++||++|+..|++++..+.+ ||+++|+
T Consensus 132 g~~~i~i~~~~-g~~~~~~~~i~~lr~~~~~~~vi~g~v~t~e~A~~a~~aGaD~I~v~ 189 (351)
T 2c6q_A 132 QVKYICLDVAN-GYSEHFVEFVKDVRKRFPQHTIMAGNVVTGEMVEELILSGADIIKVG 189 (351)
T ss_dssp TCCEEEEECSC-TTBHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHTTCSEEEEC
T ss_pred CCCEEEEEecC-CCcHHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHhCCCEEEEC
Confidence 78988776432 3222 247799999988 89999998889999988886 9999996
No 224
>1tre_A Triosephosphate isomerase; intramolecular oxidoreductase; 2.60A {Escherichia coli} SCOP: c.1.1.1 PDB: 1tmh_A
Probab=91.47 E-value=0.059 Score=46.86 Aligned_cols=32 Identities=19% Similarity=0.346 Sum_probs=28.4
Q ss_pred CCCEEEecCCChHhHHHhhc---CCEEEEeceEee
Q psy9039 214 DLPILIGSGVTSDNVEHYMT---ADALIIGSHFKQ 245 (251)
Q Consensus 214 ~~PV~vG~GI~~~~v~~~~~---ADGvIVGS~~~~ 245 (251)
+++|+-||+++++|+.+++. .||+.||++-.+
T Consensus 204 ~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgAsL~ 238 (255)
T 1tre_A 204 QVIIQYGGSVNASNAAELFAQPDIDGALVGGASLK 238 (255)
T ss_dssp HCEEEECSCCCTTTHHHHHTSTTCCEEEESGGGGC
T ss_pred cccEEEcCCCCHHHHHHHHcCCCCCeeEecHHHhC
Confidence 58999999999999999994 999999987543
No 225
>3th6_A Triosephosphate isomerase; alpha/beta barrel, embryogenesis, glycolysis; 2.40A {Rhipicephalus microplus}
Probab=91.46 E-value=0.13 Score=44.53 Aligned_cols=31 Identities=19% Similarity=0.334 Sum_probs=27.6
Q ss_pred CCCEEEecCCChHhHHHhhc---CCEEEEeceEe
Q psy9039 214 DLPILIGSGVTSDNVEHYMT---ADALIIGSHFK 244 (251)
Q Consensus 214 ~~PV~vG~GI~~~~v~~~~~---ADGvIVGS~~~ 244 (251)
+++|+-||+++++|+.+++. .||+.||++=.
T Consensus 203 ~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgASL 236 (249)
T 3th6_A 203 KVRIQYGGSVNAGNCKELGRKPDIDGFLVGGASL 236 (249)
T ss_dssp HCCEEECSCCCTTTHHHHHTSTTCCEEEECGGGG
T ss_pred cccEEEcCccCHhHHHHHhcCCCCCEEEeehHhh
Confidence 48999999999999999984 99999998743
No 226
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=91.45 E-value=0.23 Score=45.10 Aligned_cols=63 Identities=21% Similarity=0.392 Sum_probs=45.8
Q ss_pred HHHHHhhhccccEEEecCCCCCCCCC-HHHHHHHHhcCCCCEEEecCCChHhHHHhhc--CCEEEEe
Q psy9039 177 ETAKAASFFLSDGLIITGNATGDPAD-VSQLMSVKNAVDLPILIGSGVTSDNVEHYMT--ADALIIG 240 (251)
Q Consensus 177 ~~a~~a~~~~~D~v~VTG~~~g~~~~-~~~l~~vr~~~~~PV~vG~GI~~~~v~~~~~--ADGvIVG 240 (251)
+.++.+...++|.+.+.-.+ +.+.. .+.++++|+..++||++|.-.|++.+..+.+ ||++.||
T Consensus 108 e~a~~l~eaGad~I~ld~a~-G~~~~~~~~i~~i~~~~~~~Vivg~v~t~e~A~~l~~aGaD~I~VG 173 (361)
T 3khj_A 108 ERAKLLVEAGVDVIVLDSAH-GHSLNIIRTLKEIKSKMNIDVIVGNVVTEEATKELIENGADGIKVG 173 (361)
T ss_dssp HHHHHHHHTTCSEEEECCSC-CSBHHHHHHHHHHHHHCCCEEEEEEECSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHcCcCeEEEeCCC-CCcHHHHHHHHHHHHhcCCcEEEccCCCHHHHHHHHHcCcCEEEEe
Confidence 34444555689998874332 33222 3678888888899999977668999988886 9999996
No 227
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=91.42 E-value=0.4 Score=42.92 Aligned_cols=65 Identities=22% Similarity=0.404 Sum_probs=44.6
Q ss_pred HHHHHHhhhccccEEEecCCCC-------CCCC---CHHHHHHHHhcCCCCEEE---ecCCChHhHHHhhc--CCEEEEe
Q psy9039 176 TETAKAASFFLSDGLIITGNAT-------GDPA---DVSQLMSVKNAVDLPILI---GSGVTSDNVEHYMT--ADALIIG 240 (251)
Q Consensus 176 ~~~a~~a~~~~~D~v~VTG~~~-------g~~~---~~~~l~~vr~~~~~PV~v---G~GI~~~~v~~~~~--ADGvIVG 240 (251)
+...+..+..++|++.+..... +.+. ..+.++++|+.+++||++ |+|++++.+..+.+ +|+++|.
T Consensus 130 ~~~~~~~~~~gad~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~vr~~~~~Pv~vK~~~~~~~~~~a~~a~~~Gad~I~v~ 209 (349)
T 1p0k_A 130 AQAKEAVEMIGANALQIHLNVIQEIVMPEGDRSFSGALKRIEQICSRVSVPVIVKEVGFGMSKASAGKLYEAGAAAVDIG 209 (349)
T ss_dssp HHHHHHHHHTTCSEEEEEECTTTTC--------CTTHHHHHHHHHHHCSSCEEEEEESSCCCHHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHhcCCCeEEecccchhhhcCCCCCcchHHHHHHHHHHHHHcCCCEEEEecCCCCCHHHHHHHHHcCCCEEEEc
Confidence 3333333446789886654321 1111 136788999989999998 78889988888876 9999995
No 228
>1w1z_A Delta-aminolevulinic acid dehydratase; synthase, tetrapyrrole biosynthesis, ALAD, porphyrin biosynt heme biosynthesis, lyase; 2.6A {Prosthecochloris vibrioformis} SCOP: c.1.10.3 PDB: 2c1h_A*
Probab=91.36 E-value=0.89 Score=40.53 Aligned_cols=31 Identities=23% Similarity=0.314 Sum_probs=24.0
Q ss_pred ccccEEEecCCCCCCCCCHHHHHHHHhcCCCCEEE
Q psy9039 185 FLSDGLIITGNATGDPADVSQLMSVKNAVDLPILI 219 (251)
Q Consensus 185 ~~~D~v~VTG~~~g~~~~~~~l~~vr~~~~~PV~v 219 (251)
-|+|.+.|- .+ -+-++.++++|+.+++|+.+
T Consensus 245 EGAD~vMVK---Pa-l~YLDIir~vk~~~~~P~aa 275 (328)
T 1w1z_A 245 EGADIVMVK---PG-LAYLDIVWRTKERFDVPVAI 275 (328)
T ss_dssp HTCSEEEEE---SC-GGGHHHHHHHHHHHCSCEEE
T ss_pred hCCCEEEEc---CC-CchHHHHHHHHHhcCCCEEE
Confidence 499999883 22 22368899999999999986
No 229
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=91.35 E-value=0.34 Score=43.98 Aligned_cols=41 Identities=17% Similarity=0.314 Sum_probs=34.4
Q ss_pred CCHHHHHHHHhcCCCCEEEecCCChHhHHHhhc--CCEEEEec
Q psy9039 201 ADVSQLMSVKNAVDLPILIGSGVTSDNVEHYMT--ADALIIGS 241 (251)
Q Consensus 201 ~~~~~l~~vr~~~~~PV~vG~GI~~~~v~~~~~--ADGvIVGS 241 (251)
.+++.++.+|+.+++||++-+=.+.+.+..+.+ +|+++|..
T Consensus 204 ~~w~~i~~lr~~~~~PvivK~v~~~e~A~~a~~~GaD~I~vsn 246 (352)
T 3sgz_A 204 FCWNDLSLLQSITRLPIILKGILTKEDAELAMKHNVQGIVVSN 246 (352)
T ss_dssp CCHHHHHHHHHHCCSCEEEEEECSHHHHHHHHHTTCSEEEECC
T ss_pred CCHHHHHHHHHhcCCCEEEEecCcHHHHHHHHHcCCCEEEEeC
Confidence 357889999999999999986558888888775 99999954
No 230
>1pv8_A Delta-aminolevulinic acid dehydratase; porphobilinogen synthase, tetrapyrrole biosynthesis, reactio intermediate, lyase; HET: PB1; 2.20A {Homo sapiens} SCOP: c.1.10.3 PDB: 1e51_A* 2z0i_A 2z1b_A
Probab=91.17 E-value=1 Score=40.25 Aligned_cols=31 Identities=26% Similarity=0.362 Sum_probs=23.9
Q ss_pred ccccEEEecCCCCCCCCCHHHHHHHHhcC-CCCEEE
Q psy9039 185 FLSDGLIITGNATGDPADVSQLMSVKNAV-DLPILI 219 (251)
Q Consensus 185 ~~~D~v~VTG~~~g~~~~~~~l~~vr~~~-~~PV~v 219 (251)
-|+|.+.|- .+ -+-++.++++|+.+ ++|+.+
T Consensus 244 EGAD~vMVK---Pa-l~YLDIi~~vk~~~p~~P~aa 275 (330)
T 1pv8_A 244 EGADMLMVK---PG-MPYLDIVREVKDKHPDLPLAV 275 (330)
T ss_dssp TTCSBEEEE---SC-GGGHHHHHHHHHHSTTSCEEE
T ss_pred hCCceEEEe---cC-ccHHHHHHHHHHhcCCCCeEE
Confidence 599999883 22 12368899999999 999986
No 231
>3ve9_A Orotidine-5'-phosphate decarboxylase; TIM barrel fold, orotidine 5'-monopho decarboxylase, lyase; 1.45A {Metallosphaera sedula} PDB: 3ve7_A
Probab=91.11 E-value=0.24 Score=41.81 Aligned_cols=66 Identities=20% Similarity=0.180 Sum_probs=48.2
Q ss_pred cHHHHHHHhhhccccEEEecCCCCCCCCCHHHHHHHHhcCCCCEEEecCCChH--hHHHhhc--CCEEEEeceEee
Q psy9039 174 DITETAKAASFFLSDGLIITGNATGDPADVSQLMSVKNAVDLPILIGSGVTSD--NVEHYMT--ADALIIGSHFKQ 245 (251)
Q Consensus 174 ~i~~~a~~a~~~~~D~v~VTG~~~g~~~~~~~l~~vr~~~~~PV~vG~GI~~~--~v~~~~~--ADGvIVGS~~~~ 245 (251)
-..+.++.+...|+|++++++. ..+.++++|+.+.-.+++-.||+++ +..+++. +|-++||+.+-+
T Consensus 116 ~v~~~a~~a~~~G~~GvV~sat------~~~e~~~ir~~~~~f~~v~pGI~~~g~~~~~a~~~Gad~iVvGr~I~~ 185 (215)
T 3ve9_A 116 FYPYLREVARRVNPKGFVAPAT------RPSMISRVKGDFPDKLVISPGVGTQGAKPGIALCHGADYEIVGRSVYQ 185 (215)
T ss_dssp GHHHHHHHHHHHCCSEEECCTT------SHHHHHHHHHHCTTSEEEECCTTSTTCCTTHHHHTTCSEEEECHHHHT
T ss_pred HHHHHHHHHHHcCCCceeeCCC------CHHHHHHHHHhCCCcEEEcCCCCcCcCCHHHHHHcCCCEEEeCHHHcC
Confidence 3556666676678999887644 2556778888763378888999876 6666664 999999987754
No 232
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=91.05 E-value=0.19 Score=45.81 Aligned_cols=39 Identities=13% Similarity=0.436 Sum_probs=34.7
Q ss_pred HHHHHHHHhcCCCCEEE---ecCCChHhHHHhhc--CCEEEEec
Q psy9039 203 VSQLMSVKNAVDLPILI---GSGVTSDNVEHYMT--ADALIIGS 241 (251)
Q Consensus 203 ~~~l~~vr~~~~~PV~v---G~GI~~~~v~~~~~--ADGvIVGS 241 (251)
.+.|+++++.+++||++ |+|++++.++.+.+ +|+++|+-
T Consensus 176 ~~~i~~i~~~~~vPVivK~vG~g~s~~~A~~l~~aGad~I~V~g 219 (368)
T 3vkj_A 176 LEKLRDISKELSVPIIVKESGNGISMETAKLLYSYGIKNFDTSG 219 (368)
T ss_dssp HHHHHHHHTTCSSCEEEECSSSCCCHHHHHHHHHTTCCEEECCC
T ss_pred HHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHhCCCCEEEEeC
Confidence 57899999999999999 99999999988886 99999943
No 233
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=90.98 E-value=0.29 Score=46.89 Aligned_cols=57 Identities=19% Similarity=0.334 Sum_probs=45.4
Q ss_pred hccccEEEecCCCCCCCC-CHHHHHHHHhcC-CCCEEEecCCChHhHHHhhc--CCEEEEec
Q psy9039 184 FFLSDGLIITGNATGDPA-DVSQLMSVKNAV-DLPILIGSGVTSDNVEHYMT--ADALIIGS 241 (251)
Q Consensus 184 ~~~~D~v~VTG~~~g~~~-~~~~l~~vr~~~-~~PV~vG~GI~~~~v~~~~~--ADGvIVGS 241 (251)
..|+|.+++-.++ |... -.+.++.+|+.. ++||++|-=.|.+.+..++. ||++-||-
T Consensus 291 ~AGvD~iviD~ah-Ghs~~v~~~i~~ik~~~p~~~viaGNVaT~e~a~~Li~aGAD~vkVGi 351 (556)
T 4af0_A 291 EAGLDVVVLDSSQ-GNSVYQIEFIKWIKQTYPKIDVIAGNVVTREQAAQLIAAGADGLRIGM 351 (556)
T ss_dssp HTTCCEEEECCSC-CCSHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHHTCSEEEECS
T ss_pred hcCCcEEEEeccc-cccHHHHHHHHHHHhhCCcceEEeccccCHHHHHHHHHcCCCEEeecC
Confidence 4699999998775 4433 357888899876 78888777779999999986 99999983
No 234
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=90.96 E-value=0.36 Score=44.21 Aligned_cols=64 Identities=22% Similarity=0.313 Sum_probs=45.4
Q ss_pred HHHHHHhhhccccEEEecCCCCCCCC-CHHHHHHHHhcC-CCCEEEecCCChHhHHHhhc--CCEEEEe
Q psy9039 176 TETAKAASFFLSDGLIITGNATGDPA-DVSQLMSVKNAV-DLPILIGSGVTSDNVEHYMT--ADALIIG 240 (251)
Q Consensus 176 ~~~a~~a~~~~~D~v~VTG~~~g~~~-~~~~l~~vr~~~-~~PV~vG~GI~~~~v~~~~~--ADGvIVG 240 (251)
.+.++.+...|+|++.+-.. .+.+. ..+.++++|+.+ ++||+++++.+.+.+..+.+ +|+++||
T Consensus 155 ~~~a~~~~~~G~d~i~i~~~-~g~~~~~~e~i~~ir~~~~~~pviv~~v~~~~~a~~a~~~Gad~I~vg 222 (404)
T 1eep_A 155 IERVEELVKAHVDILVIDSA-HGHSTRIIELIKKIKTKYPNLDLIAGNIVTKEAALDLISVGADCLKVG 222 (404)
T ss_dssp HHHHHHHHHTTCSEEEECCS-CCSSHHHHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHTTTCSEEEEC
T ss_pred HHHHHHHHHCCCCEEEEeCC-CCChHHHHHHHHHHHHHCCCCeEEEcCCCcHHHHHHHHhcCCCEEEEC
Confidence 33444444568999887211 13222 247788999988 89999977778888888876 9999994
No 235
>3krs_A Triosephosphate isomerase; ssgcid, SBRI, emerald biostructures, university of washingto niaid, I structural genomics; 1.55A {Cryptosporidium parvum iowa II}
Probab=90.56 E-value=0.082 Score=46.36 Aligned_cols=32 Identities=28% Similarity=0.549 Sum_probs=28.5
Q ss_pred CCCEEEecCCChHhHHHhhc---CCEEEEeceEee
Q psy9039 214 DLPILIGSGVTSDNVEHYMT---ADALIIGSHFKQ 245 (251)
Q Consensus 214 ~~PV~vG~GI~~~~v~~~~~---ADGvIVGS~~~~ 245 (251)
+++|+-||+++++|+.+++. .||+.||++-.+
T Consensus 226 ~vrILYGGSV~~~N~~el~~~~diDG~LVGgASL~ 260 (271)
T 3krs_A 226 NLRIIYGGSVTPDNCNELIKCADIDGFLVGGASLK 260 (271)
T ss_dssp HCCEEECSCCCTTTHHHHHHSTTCCEEEESGGGGS
T ss_pred CccEEEcCCcCHHHHHHHhcCCCCCEEEeeHHhhh
Confidence 48999999999999999983 999999987555
No 236
>3qst_A Triosephosphate isomerase, putative; TIM barrel; 1.75A {Trichomonas vaginalis} PDB: 3qsr_A
Probab=90.55 E-value=0.075 Score=46.19 Aligned_cols=32 Identities=22% Similarity=0.453 Sum_probs=28.3
Q ss_pred CCCEEEecCCChHhHHHhhc---CCEEEEeceEee
Q psy9039 214 DLPILIGSGVTSDNVEHYMT---ADALIIGSHFKQ 245 (251)
Q Consensus 214 ~~PV~vG~GI~~~~v~~~~~---ADGvIVGS~~~~ 245 (251)
+++|+-||+++++|+.+++. .||+.||++=.+
T Consensus 207 ~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgASL~ 241 (255)
T 3qst_A 207 KVRILYGGSVKPNNCNELAACPDVDGFLVGGASLE 241 (255)
T ss_dssp HCEEEECSCCCTTTHHHHHHSTTCCEEEECGGGGS
T ss_pred cccEEEcCCcCHhHHHHHhcCCCCCEEEeeHHHhh
Confidence 48999999999999999983 999999987544
No 237
>1w0m_A TIM, triosephosphate isomerase; glycolysis, gluconeogenesis; 2.5A {Thermoproteus tenax} SCOP: c.1.1.1
Probab=90.36 E-value=0.12 Score=43.97 Aligned_cols=41 Identities=12% Similarity=0.245 Sum_probs=30.9
Q ss_pred HHHhcC-CCCEEEecCCChHhHHHhhc---CCEEEEeceEeecCe
Q psy9039 208 SVKNAV-DLPILIGSGVTSDNVEHYMT---ADALIIGSHFKQGGR 248 (251)
Q Consensus 208 ~vr~~~-~~PV~vG~GI~~~~v~~~~~---ADGvIVGS~~~~~g~ 248 (251)
.+|+.. +++++.||||++.|..+++. +||+-||+++++-.+
T Consensus 166 ~ir~~~~~~~ilyggsV~~~n~~~~~~~~giDG~LVG~a~l~a~~ 210 (226)
T 1w0m_A 166 LVSRHFPEVSVITGAGIESGDDVAAALRLGTRGVLLASAAVKAKD 210 (226)
T ss_dssp HHHHHCTTSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHTCSS
T ss_pred HHHhccCCCEEEEeCCCCcHHHHHHHHhCCCCEEEECHHHHCCcC
Confidence 344443 68999999998777666553 999999999877543
No 238
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=90.16 E-value=0.63 Score=40.56 Aligned_cols=93 Identities=15% Similarity=0.132 Sum_probs=54.8
Q ss_pred HHHHhhCCCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeCChHHHHHHHHHcC
Q psy9039 36 AEIRKVLPPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQILSGCNKAALATAQAAG 115 (251)
Q Consensus 36 ~~a~~~a~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~~~~~~ia~a~g 115 (251)
+.+++.++.+++.|+ |.|-| ++-+ + ...-.+.+..+++.+++.++ +|+.+..+... +...++..+.|
T Consensus 34 ~~a~~~a~~~v~~GA-diIDI---g~~s-~-----~~eE~~rv~~vi~~l~~~~~--~pisIDT~~~~-v~~aal~a~~G 100 (271)
T 2yci_X 34 RPIQEWARRQAEKGA-HYLDV---NTGP-T-----ADDPVRVMEWLVKTIQEVVD--LPCCLDSTNPD-AIEAGLKVHRG 100 (271)
T ss_dssp HHHHHHHHHHHHTTC-SEEEE---ECCS-C-----SSCHHHHHHHHHHHHHHHCC--CCEEEECSCHH-HHHHHHHHCCS
T ss_pred HHHHHHHHHHHHCCC-CEEEE---cCCc-C-----chhHHHHHHHHHHHHHHhCC--CeEEEeCCCHH-HHHHHHHhCCC
Confidence 444555566778999 99976 2222 1 11234557788899998887 89999998532 43344332237
Q ss_pred ccceecccccccccCCCceeecCcchhHHHHHhcCC
Q psy9039 116 LDFIRAESFVFGHMADEGLMNAQAGPLLRYRKQIGA 151 (251)
Q Consensus 116 ~~Fir~~~~~~~~~~~~Gli~~da~e~~~~r~~l~~ 151 (251)
++.+-. ..|. ..+..+..+..+++++
T Consensus 101 a~iINd---------vs~~-~d~~~~~~~~~a~~~~ 126 (271)
T 2yci_X 101 HAMINS---------TSAD-QWKMDIFFPMAKKYEA 126 (271)
T ss_dssp CCEEEE---------ECSC-HHHHHHHHHHHHHHTC
T ss_pred CCEEEE---------CCCC-ccccHHHHHHHHHcCC
Confidence 777663 1111 1011456667777776
No 239
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=90.00 E-value=0.36 Score=44.54 Aligned_cols=63 Identities=21% Similarity=0.395 Sum_probs=45.1
Q ss_pred HHHHHhhhccccEEEecCCCCCCCCC-HHHHHHHHhcCCCCEEEecCCChHhHHHhhc--CCEEEEe
Q psy9039 177 ETAKAASFFLSDGLIITGNATGDPAD-VSQLMSVKNAVDLPILIGSGVTSDNVEHYMT--ADALIIG 240 (251)
Q Consensus 177 ~~a~~a~~~~~D~v~VTG~~~g~~~~-~~~l~~vr~~~~~PV~vG~GI~~~~v~~~~~--ADGvIVG 240 (251)
+.++.+...|+|.+++.-. .+.+.. .+.++++|+..++||++|.-.|.+.+..+.+ ||+++||
T Consensus 147 e~~~~lveaGvdvIvldta-~G~~~~~~e~I~~ik~~~~i~Vi~g~V~t~e~A~~a~~aGAD~I~vG 212 (400)
T 3ffs_A 147 ERAKLLVEAGVDVIVLDSA-HGHSLNIIRTLKEIKSKMNIDVIVGNVVTEEATKELIENGADGIKVG 212 (400)
T ss_dssp HHHHHHHHHTCSEEEECCS-CCSBHHHHHHHHHHHTTCCCEEEEEEECSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHcCCCEEEEeCC-CCCcccHHHHHHHHHhcCCCeEEEeecCCHHHHHHHHHcCCCEEEEe
Confidence 3344444569999987422 233332 4778899988889999865448899888886 9999996
No 240
>1vqt_A Orotidine 5'-phosphate decarboxylase; TM0332, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.00A {Thermotoga maritima} SCOP: c.1.2.3
Probab=89.95 E-value=0.33 Score=40.69 Aligned_cols=58 Identities=14% Similarity=0.296 Sum_probs=38.2
Q ss_pred HHHHHHHhhhccccEEEecCCCCCCCCCHHHHHHHHhcCCCCEEEecCCChHh----------HHHhhc--CCEEEEece
Q psy9039 175 ITETAKAASFFLSDGLIITGNATGDPADVSQLMSVKNAVDLPILIGSGVTSDN----------VEHYMT--ADALIIGSH 242 (251)
Q Consensus 175 i~~~a~~a~~~~~D~v~VTG~~~g~~~~~~~l~~vr~~~~~PV~vG~GI~~~~----------v~~~~~--ADGvIVGS~ 242 (251)
..+.++. ...|+| ++.+. +.++++|+.++.| ++-.||++++ ..+ ++ ||+++||+.
T Consensus 128 v~~~a~~-~e~G~d-vV~~~---------~~~~~ir~~~~~~-~v~pGI~~~~~~~dq~rv~t~~~-i~aGad~iVvGR~ 194 (213)
T 1vqt_A 128 MDRIEKL-NKLGCD-FVLPG---------PWAKALREKIKGK-ILVPGIRMEVKADDQKDVVTLEE-MKGIANFAVLGRE 194 (213)
T ss_dssp HHHHHHH-HHHTCE-EECCH---------HHHHHHTTTCCSC-EEECCBC---------CCBCHHH-HTTTCSEEEESHH
T ss_pred HHHHHHH-hcCCCE-EEEcH---------HHHHHHHHHCCCC-EEECCCCCCCCccchhhcCCHHH-HHCCCCEEEEChh
Confidence 3444555 446888 43332 5678889888778 6667997665 466 64 999999998
Q ss_pred Eee
Q psy9039 243 FKQ 245 (251)
Q Consensus 243 ~~~ 245 (251)
+-+
T Consensus 195 I~~ 197 (213)
T 1vqt_A 195 IYL 197 (213)
T ss_dssp HHT
T ss_pred hcC
Confidence 754
No 241
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=89.90 E-value=0.31 Score=43.22 Aligned_cols=63 Identities=13% Similarity=0.177 Sum_probs=44.8
Q ss_pred cHHHHHHHhhhccccEEEecCCCCCCCCCHHHHHHHHhc--CCCCEEEecCCChHhHHHhhc--CCEEEEeceE
Q psy9039 174 DITETAKAASFFLSDGLIITGNATGDPADVSQLMSVKNA--VDLPILIGSGVTSDNVEHYMT--ADALIIGSHF 243 (251)
Q Consensus 174 ~i~~~a~~a~~~~~D~v~VTG~~~g~~~~~~~l~~vr~~--~~~PV~vG~GI~~~~v~~~~~--ADGvIVGS~~ 243 (251)
++++ ++.|...|+|.+-.=- .+.+.++++.+. .++++.+.||||++|++++.. +|++.|||..
T Consensus 218 tlde-~~eAl~aGaD~I~LDn------~~~~~l~~av~~i~~~v~ieaSGGI~~~~i~~~a~tGVD~isvG~lt 284 (298)
T 3gnn_A 218 TLDQ-LRTALAHGARSVLLDN------FTLDMMRDAVRVTEGRAVLEVSGGVNFDTVRAIAETGVDRISIGALT 284 (298)
T ss_dssp SHHH-HHHHHHTTCEEEEEES------CCHHHHHHHHHHHTTSEEEEEESSCSTTTHHHHHHTTCSEEECGGGG
T ss_pred CHHH-HHHHHHcCCCEEEECC------CCHHHHHHHHHHhCCCCeEEEEcCCCHHHHHHHHHcCCCEEEECCee
Confidence 4443 4555556899886621 234555543332 368899999999999999996 9999999854
No 242
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=89.90 E-value=0.85 Score=38.59 Aligned_cols=66 Identities=20% Similarity=0.276 Sum_probs=49.0
Q ss_pred CcccHHHHHHHhhhccccEEEecCCCCCCCCCHHHHHHHHhcCCCCEE----E-e----cCCCh--HhHHHhhc--CCEE
Q psy9039 171 ADVDITETAKAASFFLSDGLIITGNATGDPADVSQLMSVKNAVDLPIL----I-G----SGVTS--DNVEHYMT--ADAL 237 (251)
Q Consensus 171 ~~~~i~~~a~~a~~~~~D~v~VTG~~~g~~~~~~~l~~vr~~~~~PV~----v-G----~GI~~--~~v~~~~~--ADGv 237 (251)
+...+.++|+.++..|+.++-+. ..+.|+++|+.+++||+ - . +=|++ +++.++.. ||.+
T Consensus 34 ~~~~~~~~A~a~~~~Ga~~i~~~--------~~~~i~~ir~~v~~Pvig~~k~~~~~~~~~I~~~~~~i~~~~~aGad~I 105 (229)
T 3q58_A 34 KPEIVAAMAQAAASAGAVAVRIE--------GIENLRTVRPHLSVPIIGIIKRDLTGSPVRITPYLQDVDALAQAGADII 105 (229)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEE--------SHHHHHHHGGGCCSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTCSEE
T ss_pred CcchHHHHHHHHHHCCCcEEEEC--------CHHHHHHHHHhcCCCEEEEEeecCCCCceEeCccHHHHHHHHHcCCCEE
Confidence 34566777777777899998763 37889999999999987 1 1 22454 67888876 9999
Q ss_pred EEeceEe
Q psy9039 238 IIGSHFK 244 (251)
Q Consensus 238 IVGS~~~ 244 (251)
++++...
T Consensus 106 ~l~~~~~ 112 (229)
T 3q58_A 106 AFDASFR 112 (229)
T ss_dssp EEECCSS
T ss_pred EECcccc
Confidence 9988753
No 243
>1h7n_A 5-aminolaevulinic acid dehydratase; lyase, aldolase, TIM barrel, tetrapyrrole synthesis; HET: SHF; 1.6A {Saccharomyces cerevisiae} SCOP: c.1.10.3 PDB: 1h7p_A* 1h7r_A* 1ohl_A* 1qml_A 1qnv_A 1w31_A* 1h7o_A* 1eb3_A* 1gjp_A* 1ylv_A* 1aw5_A
Probab=89.78 E-value=1.6 Score=39.20 Aligned_cols=40 Identities=20% Similarity=0.215 Sum_probs=27.7
Q ss_pred HHHHHHhh-h--ccccEEEecCCCCCCCCCHHHHHHHHhcC-CCCEEE
Q psy9039 176 TETAKAAS-F--FLSDGLIITGNATGDPADVSQLMSVKNAV-DLPILI 219 (251)
Q Consensus 176 ~~~a~~a~-~--~~~D~v~VTG~~~g~~~~~~~l~~vr~~~-~~PV~v 219 (251)
.+..+.+. . -|+|.+.|- .+ -+-++.++++|+.+ ++|+.+
T Consensus 243 ~EAlre~~~Di~EGAD~vMVK---Pa-l~YLDIi~~vk~~~p~~P~aa 286 (342)
T 1h7n_A 243 GLARRALERDMSEGADGIIVK---PS-TFYLDIMRDASEICKDLPICA 286 (342)
T ss_dssp HHHHHHHHHHHHTTCSEEEEE---SS-GGGHHHHHHHHHHTTTSCEEE
T ss_pred HHHHHHHHhhHHhCCCeEEEe---cC-ccHHHHHHHHHHhccCCCeEE
Confidence 34445543 2 599999883 22 12368899999999 999986
No 244
>4g1k_A Triosephosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel, TPIA; 2.35A {Burkholderia thailandensis}
Probab=89.15 E-value=0.18 Score=44.20 Aligned_cols=29 Identities=28% Similarity=0.497 Sum_probs=26.8
Q ss_pred CCCEEEecCCChHhHHHhhc---CCEEEEece
Q psy9039 214 DLPILIGSGVTSDNVEHYMT---ADALIIGSH 242 (251)
Q Consensus 214 ~~PV~vG~GI~~~~v~~~~~---ADGvIVGS~ 242 (251)
++||+-||.++++|+.+++. .||+.||.+
T Consensus 226 ~~rIlYGGSV~~~N~~el~~~~dIDG~LVGgA 257 (272)
T 4g1k_A 226 HVSLLYGGSVKADNAAELFGQPDIDGGLIGGA 257 (272)
T ss_dssp TSCEEECSCCCTTTHHHHHTSTTCCEEEECGG
T ss_pred CceEEEcCCcCHhHHHHHhcCCCCCEEEechH
Confidence 58999999999999999994 999999965
No 245
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=89.06 E-value=2.5 Score=36.43 Aligned_cols=176 Identities=14% Similarity=0.122 Sum_probs=87.5
Q ss_pred cCCCCccEEEEee-----cCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEE---eeCChHHHHHHHHHcCcc
Q psy9039 46 VPVGVQHGVIVEN-----MHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQI---LSGCNKAALATAQAAGLD 117 (251)
Q Consensus 46 ~~~Gv~D~i~ieN-----~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~---~~N~~~~~~~ia~a~g~~ 117 (251)
++.|+ |+|.+.- .+|. .| -++++..-|...++.+.+.++ .|+.+.+ |-+.+.....-....|+.
T Consensus 37 ~~aG~-dai~vg~~s~a~~~G~--pD---~~~vt~~em~~~~~~I~r~~~--~pviaD~~~Gyg~~~~~~~~~l~~aGa~ 108 (255)
T 2qiw_A 37 EEAGF-SGLTIGSHPVADATGS--SD---GENMNFADYMAVVKKITSAVS--IPVSVDVESGYGLSPADLIAQILEAGAV 108 (255)
T ss_dssp HHTTC-SCEEECHHHHHHHTTC--CT---TTCSCHHHHHHHHHHHHHHCS--SCEEEECTTCTTCCHHHHHHHHHHTTCC
T ss_pred HHcCC-CEEEEChHHHHHhCCC--CC---CCCcCHHHHHHHHHHHHhcCC--CCEEeccCCCcCcHHHHHHHHHHHcCCc
Confidence 45799 9998862 2333 22 368888889999999998888 6877754 222211111111113333
Q ss_pred ceecccccccccCCCceeecC---cchhH---HHHHhcCCCcchhhhhhHhh-ccCCCCCCcccHHHHHHHhh-h--ccc
Q psy9039 118 FIRAESFVFGHMADEGLMNAQ---AGPLL---RYRKQIGADNVLVFTDIKKK-HSSHAITADVDITETAKAAS-F--FLS 187 (251)
Q Consensus 118 Fir~~~~~~~~~~~~Gli~~d---a~e~~---~~r~~l~~~~i~i~a~v~~k-~~~~~~~~~~~i~~~a~~a~-~--~~~ 187 (251)
-+... +..-....-+.+- .+.+. +.++..|. +.++.+..... .+.. .....+++..+.+. + .|+
T Consensus 109 gv~iE---d~~~~~~k~l~~~~e~~~~I~a~~~a~~~~g~-~~~v~aRtd~~~~g~~--~~~~~~~~ai~ra~a~~eAGA 182 (255)
T 2qiw_A 109 GINVE---DVVHSEGKRVREAQEHADYIAAARQAADVAGV-DVVINGRTDAVKLGAD--VFEDPMVEAIKRIKLMEQAGA 182 (255)
T ss_dssp EEEEC---SEEGGGTTEECCHHHHHHHHHHHHHHHHHHTC-CCEEEEEECHHHHCTT--TSSSHHHHHHHHHHHHHHHTC
T ss_pred EEEEC---CCCCCCCCcccCHHHHHHHHHHHHHHHHhcCC-CeEEEEEechhhccCC--cchHHHHHHHHHHHHHHHcCC
Confidence 33321 0000000001110 11111 12222233 33444422110 1110 00123566666665 3 699
Q ss_pred cEEEecCCCCCCCCCHHHHHHHHhcCCCCEEEe---cC----CChHhHHHhhcCCEEEEec
Q psy9039 188 DGLIITGNATGDPADVSQLMSVKNAVDLPILIG---SG----VTSDNVEHYMTADALIIGS 241 (251)
Q Consensus 188 D~v~VTG~~~g~~~~~~~l~~vr~~~~~PV~vG---~G----I~~~~v~~~~~ADGvIVGS 241 (251)
|++.+-|. ++.+.++++.+.+++|+.+- ++ .+.++++++- ..-++.|+
T Consensus 183 d~i~~e~~-----~~~~~~~~i~~~~~~P~n~~~~~~~~~p~~~~~eL~~lG-v~~v~~~~ 237 (255)
T 2qiw_A 183 RSVYPVGL-----STAEQVERLVDAVSVPVNITAHPVDGHGAGDLATLAGLG-VRRVTFGP 237 (255)
T ss_dssp SEEEECCC-----CSHHHHHHHHTTCSSCBEEECBTTTBBTTBCHHHHHHTT-CCEEECTT
T ss_pred cEEEEcCC-----CCHHHHHHHHHhCCCCEEEEecCCCCCCCCCHHHHHHcC-CCEEEEHH
Confidence 99999764 34678889988888887763 33 3444444431 66666554
No 246
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=89.00 E-value=1 Score=38.97 Aligned_cols=158 Identities=13% Similarity=0.068 Sum_probs=81.4
Q ss_pred HHHHhhCCCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeCChHHHHHHHHHcC
Q psy9039 36 AEIRKVLPPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQILSGCNKAALATAQAAG 115 (251)
Q Consensus 36 ~~a~~~a~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~~~~~~ia~a~g 115 (251)
+.+++.++.+++.|+ |.|-| ++- + ......+.+.|++..++..++ +|+.+..+... +...++..+.|
T Consensus 25 ~~a~~~a~~~v~~GA-diIDI---g~g--~----~~v~~~ee~~rvv~~i~~~~~--~pisIDT~~~~-v~~aAl~a~~G 91 (262)
T 1f6y_A 25 APVQEWARRQEEGGA-RALDL---NVG--P----AVQDKVSAMEWLVEVTQEVSN--LTLCLDSTNIK-AIEAGLKKCKN 91 (262)
T ss_dssp HHHHHHHHHHHHHTC-SEEEE---BCC----------CHHHHHHHHHHHHHTTCC--SEEEEECSCHH-HHHHHHHHCSS
T ss_pred HHHHHHHHHHHHCCC-cEEEE---CCC--C----CCCChHHHHHHHHHHHHHhCC--CeEEEeCCCHH-HHHHHHhhCCC
Confidence 445555566778999 99976 221 1 112245668889999988766 79999998532 44444433337
Q ss_pred ccceecccccccccCCCceeecCcchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccH---HHHHHHhhhcccc---E
Q psy9039 116 LDFIRAESFVFGHMADEGLMNAQAGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDI---TETAKAASFFLSD---G 189 (251)
Q Consensus 116 ~~Fir~~~~~~~~~~~~Gli~~da~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i---~~~a~~a~~~~~D---~ 189 (251)
++.+-. ..|. .....+..+..+++++ .+-++. ....|.|. +.+.++ .+..+.+..+|++ -
T Consensus 92 a~iINd---------vs~~-~d~~~~~~~~~a~~~~-~vvlmh--~~~~G~p~-t~~~~~~~~~~~~~~a~~~Gi~~~~I 157 (262)
T 1f6y_A 92 RAMINS---------TNAE-REKVEKLFPLAVEHGA-ALIGLT--MNKTGIPK-DSDTRLAFAMELVAAADEFGLPMEDL 157 (262)
T ss_dssp CEEEEE---------ECSC-HHHHHHHHHHHHHTTC-EEEEES--CCSSCSCS-SHHHHHHHHHHHHHHHHHHTCCGGGE
T ss_pred CCEEEE---------CCCC-cccHHHHHHHHHHhCC-cEEEEc--CCCCCCCC-CHHHHHHHHHHHHHHHHHCCCCcccE
Confidence 777663 1121 1111256677777776 222221 01123332 111121 2222333335653 3
Q ss_pred EEecCC---CCCCCCC---HHHHHHHHhcC--CCCEEEe
Q psy9039 190 LIITGN---ATGDPAD---VSQLMSVKNAV--DLPILIG 220 (251)
Q Consensus 190 v~VTG~---~~g~~~~---~~~l~~vr~~~--~~PV~vG 220 (251)
++=.|. ..+.... ++.+.++|+.. ..|+++|
T Consensus 158 ilDPg~g~~g~~~~~~~~~l~~l~~l~~~~~pg~pvl~G 196 (262)
T 1f6y_A 158 YIDPLILPANVAQDHAPEVLKTLQQIKMLADPAPKTVLG 196 (262)
T ss_dssp EEECCCCCTTTCTTHHHHHHHHHHHHHTCCSSCCEEEEE
T ss_pred EEeCCCCcCCCChHHHHHHHHHHHHHHHHhCCCCCEEEe
Confidence 322332 2222222 34566777754 8999998
No 247
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=88.95 E-value=0.6 Score=44.05 Aligned_cols=65 Identities=15% Similarity=0.253 Sum_probs=46.6
Q ss_pred HHHHHHHhhhccccEEEecCCCCCCCC-CHHHHHHHHhcC-CCCEEEecCCChHhHHHhhc--CCEEEEe
Q psy9039 175 ITETAKAASFFLSDGLIITGNATGDPA-DVSQLMSVKNAV-DLPILIGSGVTSDNVEHYMT--ADALIIG 240 (251)
Q Consensus 175 i~~~a~~a~~~~~D~v~VTG~~~g~~~-~~~~l~~vr~~~-~~PV~vG~GI~~~~v~~~~~--ADGvIVG 240 (251)
..+.++.+...|+|++.+-... |.+. ..+.++++|+.+ ++||++|.=.+.+.+..+.+ ||+++||
T Consensus 256 ~~~~a~~~~~aG~d~v~i~~~~-G~~~~~~~~i~~i~~~~~~~pvi~~~v~t~~~a~~l~~aGad~I~vg 324 (514)
T 1jcn_A 256 DKYRLDLLTQAGVDVIVLDSSQ-GNSVYQIAMVHYIKQKYPHLQVIGGNVVTAAQAKNLIDAGVDGLRVG 324 (514)
T ss_dssp HHHHHHHHHHTTCSEEEECCSC-CCSHHHHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHHHTCSEEEEC
T ss_pred hHHHHHHHHHcCCCEEEeeccC-CcchhHHHHHHHHHHhCCCCceEecccchHHHHHHHHHcCCCEEEEC
Confidence 4455555555799999984433 3332 247799999998 89998754347888888876 9999994
No 248
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=88.46 E-value=0.63 Score=42.35 Aligned_cols=67 Identities=12% Similarity=0.134 Sum_probs=45.9
Q ss_pred HHHHHHHhhhccccEEEecCCC------CCCCCC---H-HHHHHHHhcCCCCEEEe---cCCChHhHHHhhc--CCEEEE
Q psy9039 175 ITETAKAASFFLSDGLIITGNA------TGDPAD---V-SQLMSVKNAVDLPILIG---SGVTSDNVEHYMT--ADALII 239 (251)
Q Consensus 175 i~~~a~~a~~~~~D~v~VTG~~------~g~~~~---~-~~l~~vr~~~~~PV~vG---~GI~~~~v~~~~~--ADGvIV 239 (251)
.++..+..+..++|++.+.-.. .....+ + +.|+++|+.+++||++- +|.+++.+..+.+ +|+++|
T Consensus 157 ~e~~~~~ve~~~adal~ihln~~qe~~~p~Gd~~~~~~~~~I~~l~~~~~~PVivK~vg~g~s~e~A~~l~~aGad~I~V 236 (365)
T 3sr7_A 157 YQAGLQAVRDLQPLFLQVHINLMQELLMPEGEREFRSWKKHLSDYAKKLQLPFILKEVGFGMDVKTIQTAIDLGVKTVDI 236 (365)
T ss_dssp HHHHHHHHHHHCCSCEEEEECHHHHHTSSSSCCCCHHHHHHHHHHHHHCCSCEEEEECSSCCCHHHHHHHHHHTCCEEEC
T ss_pred HHHHHHHHHhcCCCEEEEeccccccccCCCCCCcHHHHHHHHHHHHHhhCCCEEEEECCCCCCHHHHHHHHHcCCCEEEE
Confidence 3444444445689998775321 111222 2 67899999999999986 4467888888886 999999
Q ss_pred ec
Q psy9039 240 GS 241 (251)
Q Consensus 240 GS 241 (251)
+-
T Consensus 237 ~g 238 (365)
T 3sr7_A 237 SG 238 (365)
T ss_dssp CC
T ss_pred eC
Confidence 53
No 249
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=88.40 E-value=1.1 Score=38.94 Aligned_cols=176 Identities=11% Similarity=0.060 Sum_probs=88.8
Q ss_pred CCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeCChHHHHHHHHHcCccceecc
Q psy9039 43 PPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQILSGCNKAALATAQAAGLDFIRAE 122 (251)
Q Consensus 43 ~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~~~~~~ia~a~g~~Fir~~ 122 (251)
+.|.+.|+ +.|++--+....|..-++ .....++++++..+ +|+.+.+ .| ...+.-|...|.+.++..
T Consensus 33 ~~L~~~Gv-~~IE~g~~~~~~~~p~~~-------~~~e~~~~i~~~~~--~~v~~l~-~n--~~~i~~a~~~G~~~V~i~ 99 (295)
T 1ydn_A 33 NRLSDCGY-ARIEATSFVSPKWVPQLA-------DSREVMAGIRRADG--VRYSVLV-PN--MKGYEAAAAAHADEIAVF 99 (295)
T ss_dssp HHHTTTTC-SEEEEEECSCTTTCGGGT-------THHHHHHHSCCCSS--SEEEEEC-SS--HHHHHHHHHTTCSEEEEE
T ss_pred HHHHHcCc-CEEEEccCcCcccccccc-------CHHHHHHHHHhCCC--CEEEEEe-CC--HHHHHHHHHCCCCEEEEE
Confidence 66788999 999873322211111011 12234455554433 5876665 44 455666667777776652
Q ss_pred ccccc---------ccCCCceeecCcchhHHHHHhcCCCcch-hhhh-hHhhccCCCCCCcccHHHHHHHhhhccccEEE
Q psy9039 123 SFVFG---------HMADEGLMNAQAGPLLRYRKQIGADNVL-VFTD-IKKKHSSHAITADVDITETAKAASFFLSDGLI 191 (251)
Q Consensus 123 ~~~~~---------~~~~~Gli~~da~e~~~~r~~l~~~~i~-i~a~-v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~ 191 (251)
... ..+.+. ......+..++.++.|. .+. .++- +-..++.. ++...+.+.++.+...|+|.+.
T Consensus 100 --~~~S~~h~~~~~~~~~~e-~~~~~~~~v~~a~~~G~-~V~~~l~~~~~~e~~~~--~~~~~~~~~~~~~~~~G~d~i~ 173 (295)
T 1ydn_A 100 --ISASEGFSKANINCTIAE-SIERLSPVIGAAINDGL-AIRGYVSCVVECPYDGP--VTPQAVASVTEQLFSLGCHEVS 173 (295)
T ss_dssp --EESCHHHHHHHTSSCHHH-HHHHHHHHHHHHHHTTC-EEEEEEECSSEETTTEE--CCHHHHHHHHHHHHHHTCSEEE
T ss_pred --EecCHHHHHHHcCCCHHH-HHHHHHHHHHHHHHcCC-eEEEEEEEEecCCcCCC--CCHHHHHHHHHHHHhcCCCEEE
Confidence 110 000000 01124455677777765 222 0100 00011111 2334455555555567999987
Q ss_pred ecCCCCCCC-C-C-HHHHHHHHhcCC-CCEEE----ecCCChHhHHHhhc--CCEEE
Q psy9039 192 ITGNATGDP-A-D-VSQLMSVKNAVD-LPILI----GSGVTSDNVEHYMT--ADALI 238 (251)
Q Consensus 192 VTG~~~g~~-~-~-~~~l~~vr~~~~-~PV~v----G~GI~~~~v~~~~~--ADGvI 238 (251)
+.=+ .|.. | . .++++++++.++ +|+-+ .+|+...|....+. ++-+-
T Consensus 174 l~Dt-~G~~~P~~~~~lv~~l~~~~~~~~l~~H~Hn~~Gla~an~l~Ai~aG~~~vd 229 (295)
T 1ydn_A 174 LGDT-IGRGTPDTVAAMLDAVLAIAPAHSLAGHYHDTGGRALDNIRVSLEKGLRVFD 229 (295)
T ss_dssp EEET-TSCCCHHHHHHHHHHHHTTSCGGGEEEEEBCTTSCHHHHHHHHHHHTCCEEE
T ss_pred ecCC-CCCcCHHHHHHHHHHHHHhCCCCeEEEEECCCcchHHHHHHHHHHhCCCEEE
Confidence 7522 2322 2 2 366888888876 78766 46776666655553 66544
No 250
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=88.40 E-value=3.6 Score=35.50 Aligned_cols=186 Identities=16% Similarity=0.171 Sum_probs=98.6
Q ss_pred cccccCCCCCCCcchHHHHHHHHHhhCCCCcCCCCccEEEEeecC--CCCccccCCCchHHHHHHHHHHHHHHHhCCCCc
Q psy9039 16 PYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQHGVIVENMH--DVPYVLEAESGPEITANMTRLCAEIRKVLPPSV 93 (251)
Q Consensus 16 p~~~~~pG~P~~~~~~~~i~~~a~~~a~~l~~~Gv~D~i~ieN~~--~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~ 93 (251)
||+-+ | |....|.+...+.+ +.+.++|+ |.|.++-+- -.||+.. |+. ..-.+++++++++.. +
T Consensus 24 ~~vIA--g-pc~~~~~e~a~~~a----~~l~~~Ga-~~vk~~~fkprts~~~~~---g~~--~egl~~l~~~~~~~G--l 88 (262)
T 1zco_A 24 FTIIA--G-PCSIESREQIMKVA----EFLAEVGI-KVLRGGAFKPRTSPYSFQ---GYG--EKALRWMREAADEYG--L 88 (262)
T ss_dssp CEEEE--E-CSBCCCHHHHHHHH----HHHHHTTC-CEEECBSSCCCSSTTSCC---CCT--HHHHHHHHHHHHHHT--C
T ss_pred cEEEE--e-CCCCCCHHHHHHHH----HHHHHcCC-CEEEEEecccCCCccccc---Ccc--HHHHHHHHHHHHHcC--C
Confidence 88888 5 77777755554444 55666899 999865441 1233322 321 233456677777777 7
Q ss_pred cEEEEEeeCChHHHHHHHHHcCccceecccccccccCCCceeecCcchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcc
Q psy9039 94 PVGVQILSGCNKAALATAQAAGLDFIRAESFVFGHMADEGLMNAQAGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADV 173 (251)
Q Consensus 94 P~Gvn~~~N~~~~~~~ia~a~g~~Fir~~~~~~~~~~~~Gli~~da~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~ 173 (251)
|+..-.+-.. +....... .++++++++.- ....+++...+.+. .|-+ |.|.. -
T Consensus 89 ~~~te~~d~~---~~~~l~~~-vd~~kIga~~~-----------~n~~ll~~~a~~~k-PV~l------k~G~~-----~ 141 (262)
T 1zco_A 89 VTVTEVMDTR---HVELVAKY-SDILQIGARNS-----------QNFELLKEVGKVEN-PVLL------KRGMG-----N 141 (262)
T ss_dssp EEEEECCCGG---GHHHHHHH-CSEEEECGGGT-----------TCHHHHHHHTTSSS-CEEE------ECCTT-----C
T ss_pred cEEEeeCCHH---hHHHHHhh-CCEEEECcccc-----------cCHHHHHHHHhcCC-cEEE------ecCCC-----C
Confidence 8888776432 33333333 68888743211 11223444444432 2222 33321 2
Q ss_pred cHHHHHHHhhh---ccc-cEEE-ecCCCC--CC---CCCHHHHHHHHhcCCCCEEEecCCC-h--H---hH-HHhh-c-C
Q psy9039 174 DITETAKAASF---FLS-DGLI-ITGNAT--GD---PADVSQLMSVKNAVDLPILIGSGVT-S--D---NV-EHYM-T-A 234 (251)
Q Consensus 174 ~i~~~a~~a~~---~~~-D~v~-VTG~~~--g~---~~~~~~l~~vr~~~~~PV~vG~GI~-~--~---~v-~~~~-~-A 234 (251)
+++++..+++. .|. +.+. --|.++ +. ..++..+..+|+.+++||++-..=+ . + .+ .+.. . |
T Consensus 142 t~~e~~~Av~~i~~~Gn~~i~L~~RG~~~~~~y~~~~v~L~ai~~lk~~~~~pVi~d~sH~~g~~~~v~~~~~aAva~Ga 221 (262)
T 1zco_A 142 TIQELLYSAEYIMAQGNENVILCERGIRTFETATRFTLDISAVPVVKELSHLPIIVDPSHPAGRRSLVIPLAKAAYAIGA 221 (262)
T ss_dssp CHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEECSSTTTCSGGGHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCcChhhcCHHHHHHHHhhhCCCEEEEcCCCCCccchHHHHHHHHHHcCC
Confidence 45665555442 354 3332 223211 11 1245678888988899987654331 1 1 22 2222 3 9
Q ss_pred CEEEEeceE
Q psy9039 235 DALIIGSHF 243 (251)
Q Consensus 235 DGvIVGS~~ 243 (251)
||+++=+.|
T Consensus 222 ~Gl~iE~H~ 230 (262)
T 1zco_A 222 DGIMVEVHP 230 (262)
T ss_dssp SEEEEEBCS
T ss_pred CEEEEEecC
Confidence 999999886
No 251
>1eix_A Orotidine 5'-monophosphate decarboxylase; alpha-beta-barrel, protein-inhibitor complex, homodimer, lyase; HET: BMQ; 2.50A {Escherichia coli} SCOP: c.1.2.3 PDB: 1jjk_A* 1l2u_A
Probab=88.20 E-value=0.39 Score=40.97 Aligned_cols=52 Identities=19% Similarity=0.313 Sum_probs=38.5
Q ss_pred ccccEEEecCCCCCCCCCHHHHHHHHhcC-CCCEEEecCCChH-----------hHHHhhc--CCEEEEeceEee
Q psy9039 185 FLSDGLIITGNATGDPADVSQLMSVKNAV-DLPILIGSGVTSD-----------NVEHYMT--ADALIIGSHFKQ 245 (251)
Q Consensus 185 ~~~D~v~VTG~~~g~~~~~~~l~~vr~~~-~~PV~vG~GI~~~-----------~v~~~~~--ADGvIVGS~~~~ 245 (251)
+|.++++.+. .+ ++++|+.. +.++.+-+||+++ ++.++++ ||.+++||++-+
T Consensus 161 ~G~~g~V~~~--------~e-i~~lr~~~~~~~i~v~gGI~~~g~~~~dq~rv~t~~~a~~aGad~iVvGr~I~~ 226 (245)
T 1eix_A 161 CGLDGVVCSA--------QE-AVRFKQVFGQEFKLVTPGIRPQGSEAGDQRRIMTPEQALSAGVDYMVIGRPVTQ 226 (245)
T ss_dssp TTCSEEECCG--------GG-HHHHHHHHCSSSEEEECCBCCTTCCCTTCCSCBCHHHHHHTTCSEEEECHHHHT
T ss_pred cCCCeEEeCH--------HH-HHHHHHhcCCCCEEEECCcCCCCCCccchhccCCHHHHHHcCCCEEEECHHHcC
Confidence 5777754432 12 55566554 4789999999988 8888885 999999998764
No 252
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=87.93 E-value=0.61 Score=41.62 Aligned_cols=61 Identities=16% Similarity=0.172 Sum_probs=40.6
Q ss_pred HHhhhcc--ccEEEecCCCCCCCC-CHHHHHHHHhcCC-CCEEEecCCChHhHHHhhc--CCEEEEec
Q psy9039 180 KAASFFL--SDGLIITGNATGDPA-DVSQLMSVKNAVD-LPILIGSGVTSDNVEHYMT--ADALIIGS 241 (251)
Q Consensus 180 ~~a~~~~--~D~v~VTG~~~g~~~-~~~~l~~vr~~~~-~PV~vG~GI~~~~v~~~~~--ADGvIVGS 241 (251)
+.....+ +|.+.+.... |.+. ..+.++++|+.++ .||+.|+..+.+.++.+.+ ||+++|++
T Consensus 112 ~~~~~~g~~~~~i~i~~~~-G~~~~~~~~i~~lr~~~~~~~vi~G~v~s~e~A~~a~~aGad~Ivvs~ 178 (336)
T 1ypf_A 112 QQLAAEHLTPEYITIDIAH-GHSNAVINMIQHIKKHLPESFVIAGNVGTPEAVRELENAGADATKVGI 178 (336)
T ss_dssp HHHHHTTCCCSEEEEECSS-CCSHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHHTCSEEEECS
T ss_pred HHHHhcCCCCCEEEEECCC-CCcHHHHHHHHHHHHhCCCCEEEECCcCCHHHHHHHHHcCCCEEEEec
Confidence 3333356 8887764432 3322 3478999999986 4555443448898888886 99999954
No 253
>3ru6_A Orotidine 5'-phosphate decarboxylase; structural genomics, center for structural genomics of infec diseases (csgid), TIM-barrel; 1.80A {Campylobacter jejuni subsp}
Probab=87.88 E-value=0.65 Score=41.24 Aligned_cols=59 Identities=14% Similarity=0.144 Sum_probs=41.2
Q ss_pred HHHHhhhccccEEEecCCCCCCCCCHHHHHHHHhcC-CCCEEEecCCChH-----------hHHHhhc--CCEEEEeceE
Q psy9039 178 TAKAASFFLSDGLIITGNATGDPADVSQLMSVKNAV-DLPILIGSGVTSD-----------NVEHYMT--ADALIIGSHF 243 (251)
Q Consensus 178 ~a~~a~~~~~D~v~VTG~~~g~~~~~~~l~~vr~~~-~~PV~vG~GI~~~-----------~v~~~~~--ADGvIVGS~~ 243 (251)
.|+.+...|+|+++.+.. + ++++|+.+ +-.+++-.||.++ +..++.. ||.+||||++
T Consensus 163 lA~~a~~~G~dGvV~s~~------E---~~~IR~~~~~~fl~VTPGIr~qG~~~~DQ~Rv~t~~~a~~aGAd~iVvGr~I 233 (303)
T 3ru6_A 163 FSKISYENGLDGMVCSVF------E---SKKIKEHTSSNFLTLTPGIRPFGETNDDQKRVANLAMARENLSDYIVVGRPI 233 (303)
T ss_dssp HHHHHHHTTCSEEECCTT------T---HHHHHHHSCTTSEEEECCCCTTC--------CCSHHHHHHTTCSEEEECHHH
T ss_pred HHHHHHHcCCCEEEECHH------H---HHHHHHhCCCccEEECCCcCcccCCcccccccCCHHHHHHcCCCEEEEChHH
Confidence 444555578999766432 2 45677766 4578889999765 5666664 9999999987
Q ss_pred ee
Q psy9039 244 KQ 245 (251)
Q Consensus 244 ~~ 245 (251)
-+
T Consensus 234 ~~ 235 (303)
T 3ru6_A 234 YK 235 (303)
T ss_dssp HT
T ss_pred hC
Confidence 54
No 254
>2yyu_A Orotidine 5'-phosphate decarboxylase; TIM barrel, structural genomics, NPPSFA, national project on structural and functional analyses; HET: C5P; 2.20A {Geobacillus kaustophilus} PDB: 2yyt_A*
Probab=87.81 E-value=0.42 Score=40.79 Aligned_cols=52 Identities=13% Similarity=0.204 Sum_probs=38.5
Q ss_pred ccccEEEecCCCCCCCCCHHHHHHHHhcC-CCCEEEecCCChH-----------hHHHhhc--CCEEEEeceEee
Q psy9039 185 FLSDGLIITGNATGDPADVSQLMSVKNAV-DLPILIGSGVTSD-----------NVEHYMT--ADALIIGSHFKQ 245 (251)
Q Consensus 185 ~~~D~v~VTG~~~g~~~~~~~l~~vr~~~-~~PV~vG~GI~~~-----------~v~~~~~--ADGvIVGS~~~~ 245 (251)
+|.++++.+. .+ ++++|+.. ..++.+-+||+++ ++.++++ ||.+++||++.+
T Consensus 155 ~G~~g~V~~~--------~e-i~~lr~~~~~~~i~V~gGI~~~g~~~~dq~rv~t~~~a~~aGad~iVvGr~I~~ 220 (246)
T 2yyu_A 155 SGLDGVVCSA--------NE-AAFIKERCGASFLAVTPGIRFADDAAHDQVRVVTPRKARALGSDYIVIGRSLTR 220 (246)
T ss_dssp HTCCEEECCH--------HH-HHHHHHHHCTTSEEEECCCCCCC-------CCCCHHHHHHHTCSEEEECHHHHT
T ss_pred hCCCEEEeCH--------HH-HHHHHHhcCCCCEEEeCCcCCCCCCcccccccCCHHHHHHcCCCEEEECHhhcC
Confidence 5777754332 23 66677665 3569999999887 7888875 999999998764
No 255
>1l6s_A Porphobilinogen synthase; dehydratase, lyase; HET: CME DSB; 1.70A {Escherichia coli} SCOP: c.1.10.3 PDB: 1i8j_A* 1l6y_A* 1b4e_A
Probab=87.71 E-value=1.9 Score=38.33 Aligned_cols=40 Identities=18% Similarity=0.203 Sum_probs=28.2
Q ss_pred HHHHHHhh-h--ccccEEEecCCCCCCCCCHHHHHHHHhcCCCCEEE
Q psy9039 176 TETAKAAS-F--FLSDGLIITGNATGDPADVSQLMSVKNAVDLPILI 219 (251)
Q Consensus 176 ~~~a~~a~-~--~~~D~v~VTG~~~g~~~~~~~l~~vr~~~~~PV~v 219 (251)
.+..+.+. . -|+|.+.|- .+ -+-++.++++|+.+++|+.+
T Consensus 226 ~EAlre~~~Di~EGAD~vMVK---Pa-l~YLDIi~~vk~~~~~P~aa 268 (323)
T 1l6s_A 226 REAIRESLLDEAQGADCLMVK---PA-GAYLDIVRELRERTELPIGA 268 (323)
T ss_dssp HHHHHHHHHHHHTTCSBEEEE---SC-TTCHHHHHHHHTTCSSCEEE
T ss_pred HHHHHHHHhhHHhCCceEEEe---cC-cchhHHHHHHHHhcCCCeEE
Confidence 34444443 2 599999883 22 23478899999999999986
No 256
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=87.57 E-value=1.8 Score=38.11 Aligned_cols=56 Identities=18% Similarity=0.200 Sum_probs=37.3
Q ss_pred HHhhhccccEEEe-cCCCCCCCC--CHHHHHHHHh--cCCCCEEEecCC-ChHhHHHhhc--CC
Q psy9039 180 KAASFFLSDGLII-TGNATGDPA--DVSQLMSVKN--AVDLPILIGSGV-TSDNVEHYMT--AD 235 (251)
Q Consensus 180 ~~a~~~~~D~v~V-TG~~~g~~~--~~~~l~~vr~--~~~~PV~vG~GI-~~~~v~~~~~--AD 235 (251)
+.+...|+|.+=+ ||..++..+ +.++++++.+ ..++||-+.||| |.+++.+++. |+
T Consensus 195 ~ia~eaGADfVKTSTGf~~~GAT~edv~lmr~~v~~~g~~v~VKAAGGIrt~edAl~mi~aGA~ 258 (288)
T 3oa3_A 195 VLSSLAGADYVKTSTGFNGPGASIENVSLMSAVCDSLQSETRVKASGGIRTIEDCVKMVRAGAE 258 (288)
T ss_dssp HHHHHTTCSEEECCCSSSSCCCCHHHHHHHHHHHHHSSSCCEEEEESSCCSHHHHHHHHHTTCS
T ss_pred HHHHHcCCCEEEcCCCCCCCCCCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHcCCc
Confidence 3344579999855 455433322 2344555443 247999999999 6899999986 87
No 257
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=87.54 E-value=2 Score=35.19 Aligned_cols=69 Identities=14% Similarity=0.110 Sum_probs=47.7
Q ss_pred ccHHHHHHHhhhccccEEEe---cCC-CCCCCCCHHHHHHHHhcCCCCEEEecCCC-hH-hHHHhhc--CCEEEEec
Q psy9039 173 VDITETAKAASFFLSDGLII---TGN-ATGDPADVSQLMSVKNAVDLPILIGSGVT-SD-NVEHYMT--ADALIIGS 241 (251)
Q Consensus 173 ~~i~~~a~~a~~~~~D~v~V---TG~-~~g~~~~~~~l~~vr~~~~~PV~vG~GI~-~~-~v~~~~~--ADGvIVGS 241 (251)
.++.+.++.+...|+|.+.+ -|. ........+.++++|+.++.|+.+++.++ ++ .+..+.. +|++++..
T Consensus 16 ~~~~~~~~~~~~~G~~~i~~~~~dg~~~~~~~~g~~~i~~i~~~~~~~~~v~l~v~d~~~~i~~~~~~gad~v~vh~ 92 (220)
T 2fli_A 16 ANFASELARIEETDAEYVHIDIMDGQFVPNISFGADVVASMRKHSKLVFDCHLMVVDPERYVEAFAQAGADIMTIHT 92 (220)
T ss_dssp GGHHHHHHHHHHTTCCEEEEEEEBSSSSSCBCBCHHHHHHHHTTCCSEEEEEEESSSGGGGHHHHHHHTCSEEEEEG
T ss_pred HHHHHHHHHHHHcCCCEEEEEeecCCCCCccccCHHHHHHHHHhCCCCEEEEEeecCHHHHHHHHHHcCCCEEEEcc
Confidence 35566666666668887533 354 21123347889999998889999999994 54 5766665 99999964
No 258
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=87.17 E-value=0.89 Score=43.06 Aligned_cols=64 Identities=14% Similarity=0.235 Sum_probs=45.3
Q ss_pred HHHHHhhhccccEEEecCCCCCCCCCHHHHHHHHhcC-CCCEEEecCCChHhHHHhhc--CCEEEEe
Q psy9039 177 ETAKAASFFLSDGLIITGNATGDPADVSQLMSVKNAV-DLPILIGSGVTSDNVEHYMT--ADALIIG 240 (251)
Q Consensus 177 ~~a~~a~~~~~D~v~VTG~~~g~~~~~~~l~~vr~~~-~~PV~vG~GI~~~~v~~~~~--ADGvIVG 240 (251)
+.++.....|+|.+++...+.....-.+.++++|+.. ++||++|.-.+.+.++.+.+ ||+++||
T Consensus 259 era~aLveaGvd~I~Id~a~g~~~~v~~~i~~i~~~~~~~~vi~g~v~t~e~a~~~~~aGad~i~vg 325 (511)
T 3usb_A 259 TRIDALVKASVDAIVLDTAHGHSQGVIDKVKEVRAKYPSLNIIAGNVATAEATKALIEAGANVVKVG 325 (511)
T ss_dssp HHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHhhccceEEecccccchhhhhhHHHHHHHhCCCceEEeeeeccHHHHHHHHHhCCCEEEEC
Confidence 3344444569999999876532222247888999886 58888665448888888886 9999985
No 259
>4dbe_A Orotidine 5'-phosphate decarboxylase; TIM barrel, orotidine 5'-monophosphate decarboxylase, inhibi lyase-lyase inhibitor complex; HET: BMP; 1.79A {Sulfolobus solfataricus}
Probab=87.08 E-value=0.67 Score=39.13 Aligned_cols=64 Identities=14% Similarity=0.265 Sum_probs=45.4
Q ss_pred HHHHHHhhhccccEEEecCCCCCCCCCHHHHHHHHhcCCCCEEEecCCChH--hHHHhhc--CCEEEEeceEee
Q psy9039 176 TETAKAASFFLSDGLIITGNATGDPADVSQLMSVKNAVDLPILIGSGVTSD--NVEHYMT--ADALIIGSHFKQ 245 (251)
Q Consensus 176 ~~~a~~a~~~~~D~v~VTG~~~g~~~~~~~l~~vr~~~~~PV~vG~GI~~~--~v~~~~~--ADGvIVGS~~~~ 245 (251)
.+.++.+...|+|++++++. ..+.++++|+.++--+++-.||.++ +..+++. +|-+|||..+-+
T Consensus 125 ~~~a~~a~~~g~~GvV~sat------~p~e~~~ir~~~~~~~~vtPGI~~~g~tp~~a~~~Gad~iVVGR~I~~ 192 (222)
T 4dbe_A 125 DYIKNVIREISPKGIVVGGT------KLDHITQYRRDFEKMTIVSPGMGSQGGSYGDAVCAGADYEIIGRSIYN 192 (222)
T ss_dssp HHHHHHHHHHCCSEEEECTT------CHHHHHHHHHHCTTCEEEECCBSTTSBCTTHHHHHTCSEEEECHHHHT
T ss_pred HHHHHHHHHhCCCEEEECCC------CHHHHHHHHHhCCCCEEEcCCcccCccCHHHHHHcCCCEEEECHHhcC
Confidence 45566666678999887653 3466778888764367788899765 5666664 999999987643
No 260
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=87.05 E-value=0.68 Score=38.04 Aligned_cols=65 Identities=18% Similarity=0.184 Sum_probs=44.8
Q ss_pred cHHHHHHHhhhccccEEEecCCCCCCCCCHHHHHHHHhcCCCCEEEecC-C-ChHhHHHhhc--CCEEEEec
Q psy9039 174 DITETAKAASFFLSDGLIITGNATGDPADVSQLMSVKNAVDLPILIGSG-V-TSDNVEHYMT--ADALIIGS 241 (251)
Q Consensus 174 ~i~~~a~~a~~~~~D~v~VTG~~~g~~~~~~~l~~vr~~~~~PV~vG~G-I-~~~~v~~~~~--ADGvIVGS 241 (251)
...+.++.+...|+|.+-++=.. ....+.++++++..++|+++|.| + +++++..++. ||++.+|+
T Consensus 20 ~~~~~~~~~~~~G~~~i~l~~~~---~~~~~~i~~i~~~~~~~l~vg~g~~~~~~~i~~a~~~Gad~V~~~~ 88 (212)
T 2v82_A 20 EALAHVGAVIDAGFDAVEIPLNS---PQWEQSIPAIVDAYGDKALIGAGTVLKPEQVDALARMGCQLIVTPN 88 (212)
T ss_dssp HHHHHHHHHHHHTCCEEEEETTS---TTHHHHHHHHHHHHTTTSEEEEECCCSHHHHHHHHHTTCCEEECSS
T ss_pred HHHHHHHHHHHCCCCEEEEeCCC---hhHHHHHHHHHHhCCCCeEEEeccccCHHHHHHHHHcCCCEEEeCC
Confidence 34455555555689999885332 22346677777777889888644 4 6888888886 99998776
No 261
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=86.90 E-value=0.84 Score=40.46 Aligned_cols=63 Identities=16% Similarity=0.185 Sum_probs=44.3
Q ss_pred cHHHHHHHhhhccccEEEecCCCCCCCCCHHHHHHHHhcC--CCCEEEecCCChHhHHHhhc--CCEEEEeceE
Q psy9039 174 DITETAKAASFFLSDGLIITGNATGDPADVSQLMSVKNAV--DLPILIGSGVTSDNVEHYMT--ADALIIGSHF 243 (251)
Q Consensus 174 ~i~~~a~~a~~~~~D~v~VTG~~~g~~~~~~~l~~vr~~~--~~PV~vG~GI~~~~v~~~~~--ADGvIVGS~~ 243 (251)
++ +.++.|...|+|.+-.-. .+.+.++++.+.. .+.+-+.||||++|++++.. +|.+.+|+..
T Consensus 216 tl-~e~~eAl~aGaDiImLDn------~s~~~l~~av~~~~~~v~leaSGGIt~~~i~~~A~tGVD~IsvGalt 282 (300)
T 3l0g_A 216 NI-SQVEESLSNNVDMILLDN------MSISEIKKAVDIVNGKSVLEVSGCVNIRNVRNIALTGVDYISIGCIT 282 (300)
T ss_dssp SH-HHHHHHHHTTCSEEEEES------CCHHHHHHHHHHHTTSSEEEEESSCCTTTHHHHHTTTCSEEECGGGT
T ss_pred CH-HHHHHHHHcCCCEEEECC------CCHHHHHHHHHhhcCceEEEEECCCCHHHHHHHHHcCCCEEEeCccc
Confidence 44 345556556899886632 2344454433322 58899999999999999997 9999999754
No 262
>3ta6_A Triosephosphate isomerase; HET: FLC; 1.41A {Mycobacterium tuberculosis} SCOP: c.1.1.0 PDB: 3tao_A* 3gvg_A
Probab=86.81 E-value=0.69 Score=40.34 Aligned_cols=29 Identities=24% Similarity=0.478 Sum_probs=26.6
Q ss_pred CCCEEEecCCChHhHHHhhc---CCEEEEece
Q psy9039 214 DLPILIGSGVTSDNVEHYMT---ADALIIGSH 242 (251)
Q Consensus 214 ~~PV~vG~GI~~~~v~~~~~---ADGvIVGS~ 242 (251)
+++|+-||.++++|+++++. .||+.||.+
T Consensus 210 ~~rIlYGGSV~~~N~~el~~~~diDG~LVGgA 241 (267)
T 3ta6_A 210 TVRVLYGGSVNAKNVGDIVAQDDVDGGLVGGA 241 (267)
T ss_dssp TSCEEECSCCCTTTHHHHHTSTTCCEEEECGG
T ss_pred cceEEEcCCcCHhHHHHHhcCCCCCEEEechH
Confidence 58999999999999999984 999999965
No 263
>1dbt_A Orotidine 5'-phosphate decarboxylase; UMP, TIM barrel, lyase; HET: U5P; 2.40A {Bacillus subtilis} SCOP: c.1.2.3
Probab=86.78 E-value=0.5 Score=40.06 Aligned_cols=53 Identities=13% Similarity=0.172 Sum_probs=39.1
Q ss_pred hccccEEEecCCCCCCCCCHHHHHHHHhcC-CCCEEEecCCChHhH-----------HHhhc--CCEEEEeceEee
Q psy9039 184 FFLSDGLIITGNATGDPADVSQLMSVKNAV-DLPILIGSGVTSDNV-----------EHYMT--ADALIIGSHFKQ 245 (251)
Q Consensus 184 ~~~~D~v~VTG~~~g~~~~~~~l~~vr~~~-~~PV~vG~GI~~~~v-----------~~~~~--ADGvIVGS~~~~ 245 (251)
.+|.++++.+. +.++++|+.. +.++.+-+||++++. .++++ ||.+++||++.+
T Consensus 153 ~~G~~g~v~~~---------~~i~~lr~~~~~~~i~v~gGI~~~~~~~~dq~rv~tp~~a~~aGad~iVvGr~I~~ 219 (239)
T 1dbt_A 153 ESGLDGVVCSV---------HEAKAIYQAVSPSFLTVTPGIRMSEDAANDQVRVATPAIAREKGSSAIVVGRSITK 219 (239)
T ss_dssp HTTCSEEECCG---------GGHHHHTTTSCTTCEEEECCBCCTTSCCTTCSSCBCHHHHHHTTCSEEEECHHHHT
T ss_pred HhCCCEEEECH---------HHHHHHHHhcCCCcEEEeCCcCCCCCCccceeccCCHHHHHHcCCCEEEEChhhcC
Confidence 35777754442 2466677766 478999999998776 66665 999999998764
No 264
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=86.74 E-value=0.51 Score=41.85 Aligned_cols=95 Identities=21% Similarity=0.095 Sum_probs=53.4
Q ss_pred HHHHhhCCCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHH---HhCCCCccEEEEEeeCChHHHHHHHH
Q psy9039 36 AEIRKVLPPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIR---KVLPPSVPVGVQILSGCNKAALATAQ 112 (251)
Q Consensus 36 ~~a~~~a~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr---~~~~~~~P~Gvn~~~N~~~~~~~ia~ 112 (251)
+.+++.++.+++.|+ |.|-| |. |. .++ + -.+.|.|++..++ +..+ +|+.+..+... +...++..
T Consensus 37 ~~a~~~A~~~v~~GA-diIDI-g~-g~---~~v-~---~~eem~rvv~~i~~~~~~~~--vpisIDT~~~~-V~eaaL~~ 103 (300)
T 3k13_A 37 DEALSIARQQVEDGA-LVIDV-NM-DD---GLL-D---ARTEMTTFLNLIMSEPEIAR--VPVMIDSSKWE-VIEAGLKC 103 (300)
T ss_dssp HHHHHHHHHHHHTTC-SEEEE-EC-CC---TTS-C---HHHHHHHHHHHHHTCHHHHT--SCEEEECSCHH-HHHHHHHH
T ss_pred HHHHHHHHHHHHCCC-CEEEE-CC-CC---CCC-C---HHHHHHHHHHHHHHhhhcCC--CeEEEeCCCHH-HHHHHHHh
Confidence 444555566778999 99976 22 21 111 2 3445777666665 4456 79999998643 54555543
Q ss_pred HcCccceecccccccccCCCceeecCcchhHHHHHhcCC
Q psy9039 113 AAGLDFIRAESFVFGHMADEGLMNAQAGPLLRYRKQIGA 151 (251)
Q Consensus 113 a~g~~Fir~~~~~~~~~~~~Gli~~da~e~~~~r~~l~~ 151 (251)
+.|++.+-.- .+ .. ..+...+..+..+++++
T Consensus 104 ~~Ga~iINdI--s~----~~--~d~~~~~~~~l~a~~ga 134 (300)
T 3k13_A 104 LQGKSIVNSI--SL----KE--GEEVFLEHARIIKQYGA 134 (300)
T ss_dssp CSSCCEEEEE--CS----TT--CHHHHHHHHHHHHHHTC
T ss_pred cCCCCEEEeC--Cc----cc--CChhHHHHHHHHHHhCC
Confidence 3576665530 00 00 01122256777888887
No 265
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=86.65 E-value=1.2 Score=39.42 Aligned_cols=63 Identities=17% Similarity=0.171 Sum_probs=43.2
Q ss_pred HHHHHHHhhhccccEEEe-cCC----C-CC---CCCCHHHHHHHHhcCCCCEEEecCCC-hHhHHHhhc--CCEE
Q psy9039 175 ITETAKAASFFLSDGLII-TGN----A-TG---DPADVSQLMSVKNAVDLPILIGSGVT-SDNVEHYMT--ADAL 237 (251)
Q Consensus 175 i~~~a~~a~~~~~D~v~V-TG~----~-~g---~~~~~~~l~~vr~~~~~PV~vG~GI~-~~~v~~~~~--ADGv 237 (251)
..++|+..+..|+|++.+ |-. + .+ ...+.+.|+++|+.+++||+.+.++. -+.++.+.. ||.+
T Consensus 30 ~~e~A~~ye~~GA~~lsvLe~~~~Di~~~~g~~R~~~~~~i~~i~~~v~iPvl~k~~i~~ide~qil~aaGAD~I 104 (297)
T 4adt_A 30 NVEQAKIAEKAGAIGVMILENIPSELRNTDGVARSVDPLKIEEIRKCISINVLAKVRIGHFVEAQILEELKVDML 104 (297)
T ss_dssp SHHHHHHHHHHTCSEEEECCCCC-----CCCCCCCCCHHHHHHHHTTCCSEEEEEEETTCHHHHHHHHHTTCSEE
T ss_pred cHHHHHHHHHcCCCEEEEecCCCCcchhcCCcccCCCHHHHHHHHHhcCCCEEEeccCCcHHHHHHHHHcCCCEE
Confidence 346666666678888754 311 1 11 12368999999999999999998884 555555554 9998
No 266
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=86.20 E-value=2.6 Score=38.01 Aligned_cols=40 Identities=18% Similarity=0.354 Sum_probs=34.2
Q ss_pred CHHHHHHHHhcCCCCEEEecCCChHhHHHhhc--CCEEEEec
Q psy9039 202 DVSQLMSVKNAVDLPILIGSGVTSDNVEHYMT--ADALIIGS 241 (251)
Q Consensus 202 ~~~~l~~vr~~~~~PV~vG~GI~~~~v~~~~~--ADGvIVGS 241 (251)
.++.++++|+.+++||++++-.+++.+..+.+ +|+++|+.
T Consensus 213 ~~~~i~~l~~~~~~pv~vK~~~~~e~a~~a~~~Gad~I~vs~ 254 (370)
T 1gox_A 213 SWKDVAWLQTITSLPILVKGVITAEDARLAVQHGAAGIIVSN 254 (370)
T ss_dssp CHHHHHHHHHHCCSCEEEECCCSHHHHHHHHHTTCSEEEECC
T ss_pred hHHHHHHHHHHhCCCEEEEecCCHHHHHHHHHcCCCEEEECC
Confidence 46789999999999999876668988888886 99999975
No 267
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=86.09 E-value=2.9 Score=37.08 Aligned_cols=176 Identities=11% Similarity=0.162 Sum_probs=91.4
Q ss_pred cCCCCccEEEEee-----cCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEE---eeCCh--HHHHHHHHHcC
Q psy9039 46 VPVGVQHGVIVEN-----MHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQI---LSGCN--KAALATAQAAG 115 (251)
Q Consensus 46 ~~~Gv~D~i~ieN-----~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~---~~N~~--~~~~~ia~a~g 115 (251)
++.|+ |+|.+.- ..|. .| .++++..-|...++.+.+.++ .|+.+.+ |-|+. ......-...|
T Consensus 46 e~aG~-dai~vs~~s~a~~~G~--pD---~~~vt~~em~~~~~~I~r~~~--~pviaD~d~Gyg~~~~v~~~v~~l~~aG 117 (305)
T 3ih1_A 46 RNTGF-LALYLSGAAYTASKGL--PD---LGIVTSTEVAERARDLVRATD--LPVLVDIDTGFGGVLNVARTAVEMVEAK 117 (305)
T ss_dssp HHTTC-SCEEECHHHHHHHHTC--CS---SSCSCHHHHHHHHHHHHHHHC--CCEEEECTTCSSSHHHHHHHHHHHHHTT
T ss_pred HHcCC-CEEEECcHHHHHhCCC--CC---CCcCCHHHHHHHHHHHHHhcC--CCEEEECCCCCCCHHHHHHHHHHHHHhC
Confidence 56799 9998753 2232 22 367788888888888888777 6876654 33320 01111112244
Q ss_pred ccceecccccc-ccc---CCCceeecC--cchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhh-h--cc
Q psy9039 116 LDFIRAESFVF-GHM---ADEGLMNAQ--AGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAAS-F--FL 186 (251)
Q Consensus 116 ~~Fir~~~~~~-~~~---~~~Gli~~d--a~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~-~--~~ 186 (251)
+.-+...--.. ..+ +...++..+ ...+...++. + .+..+.+..... ....+++..+.+. + .|
T Consensus 118 aagv~iED~~~~krcGh~~gk~l~~~~e~~~rI~Aa~~A-~-~~~~I~ARtda~-------~~~g~~~ai~Ra~ay~eAG 188 (305)
T 3ih1_A 118 VAAVQIEDQQLPKKCGHLNGKKLVTTEELVQKIKAIKEV-A-PSLYIVARTDAR-------GVEGLDEAIERANAYVKAG 188 (305)
T ss_dssp CSEEEEECBCSSCCTTCTTCCCBCCHHHHHHHHHHHHHH-C-TTSEEEEEECCH-------HHHCHHHHHHHHHHHHHHT
T ss_pred CcEEEECCCCCCcccCCCCCCcccCHHHHHHHHHHHHHc-C-CCeEEEEeeccc-------cccCHHHHHHHHHHHHHcC
Confidence 44444321000 000 011111111 2222222333 3 244444321100 0012455555554 2 59
Q ss_pred ccEEEecCCCCCCCCCHHHHHHHHhcCCCCEEE---ecCCCh-HhHHHhhc--CCEEEEeceE
Q psy9039 187 SDGLIITGNATGDPADVSQLMSVKNAVDLPILI---GSGVTS-DNVEHYMT--ADALIIGSHF 243 (251)
Q Consensus 187 ~D~v~VTG~~~g~~~~~~~l~~vr~~~~~PV~v---G~GI~~-~~v~~~~~--ADGvIVGS~~ 243 (251)
||++.+-|. ++.+.++++.+.+++|+++ .+|-+| -+..++.. ..-+++|..+
T Consensus 189 AD~i~~e~~-----~~~~~~~~i~~~~~~P~~~n~~~~g~tp~~~~~eL~~lGv~~v~~~~~~ 246 (305)
T 3ih1_A 189 ADAIFPEAL-----QSEEEFRLFNSKVNAPLLANMTEFGKTPYYSAEEFANMGFQMVIYPVTS 246 (305)
T ss_dssp CSEEEETTC-----CSHHHHHHHHHHSCSCBEEECCTTSSSCCCCHHHHHHTTCSEEEECSHH
T ss_pred CCEEEEcCC-----CCHHHHHHHHHHcCCCEEEeecCCCCCCCCCHHHHHHcCCCEEEEchHH
Confidence 999999765 3578889999989999974 356543 33455443 7888888654
No 268
>3bul_A Methionine synthase; transferase, reactivation conformation, cobalamin, intermodular interactions, amino-acid biosynthesis, cobalt; HET: B12; 2.30A {Escherichia coli} SCOP: a.46.1.1 c.23.6.1 d.173.1.1 PDB: 3iv9_A* 3iva_A* 1k7y_A* 1k98_A* 1bmt_A*
Probab=85.98 E-value=0.77 Score=44.31 Aligned_cols=76 Identities=12% Similarity=0.137 Sum_probs=52.2
Q ss_pred chhhhhhHhhccCCC--CCCcccHHHHHHHhhhccccEEEecCCCCCCCCCH-HHHHHHHhcC-CCCEEEecCC-ChHhH
Q psy9039 154 VLVFTDIKKKHSSHA--ITADVDITETAKAASFFLSDGLIITGNATGDPADV-SQLMSVKNAV-DLPILIGSGV-TSDNV 228 (251)
Q Consensus 154 i~i~a~v~~k~~~~~--~~~~~~i~~~a~~a~~~~~D~v~VTG~~~g~~~~~-~~l~~vr~~~-~~PV~vG~GI-~~~~v 228 (251)
..+++.+...+|..+ ...+.+.+++.+.+....+|.+++|+..+.....+ +.++++++.. ++||++||.. +.+..
T Consensus 115 ~~iva~~L~~~G~eVi~LG~~vP~e~iv~aa~~~~~diVgLS~l~t~~~~~m~~~i~~Lr~~g~~i~ViVGGa~~~~~~a 194 (579)
T 3bul_A 115 KNIVGVVLQCNNYEIVDLGVMVPAEKILRTAKEVNADLIGLSGLITPSLDEMVNVAKEMERQGFTIPLLIGGATTSKAHT 194 (579)
T ss_dssp HHHHHHHHHTTTCEEEECCSSBCHHHHHHHHHHHTCSEEEEECCSTHHHHHHHHHHHHHHHTTCCSCEEEESTTCCHHHH
T ss_pred HHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEEecCCCCHHHHHHHHHHHHHcCCCCeEEEEccccchhhh
Confidence 345555555555443 34567888988888878999999999765433333 4566777654 8999999998 56554
Q ss_pred H
Q psy9039 229 E 229 (251)
Q Consensus 229 ~ 229 (251)
+
T Consensus 195 ~ 195 (579)
T 3bul_A 195 A 195 (579)
T ss_dssp H
T ss_pred h
Confidence 4
No 269
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=85.95 E-value=11 Score=32.70 Aligned_cols=171 Identities=15% Similarity=0.148 Sum_probs=76.5
Q ss_pred CCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeCChHHHHHH---HHHcCccce
Q psy9039 43 PPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQILSGCNKAALAT---AQAAGLDFI 119 (251)
Q Consensus 43 ~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~~~~~~i---a~a~g~~Fi 119 (251)
+-|+++|+ |||.+-=-.|=-++. .-.+..+-+..+++.++. .+|+.+.+-.|....+... |...|++.+
T Consensus 35 ~~li~~Gv-~gl~~~GttGE~~~L---s~~Er~~v~~~~~~~~~g----rvpviaGvg~~~t~~ai~la~~a~~~Gadav 106 (297)
T 3flu_A 35 DWHIENGT-DGIVAVGTTGESATL---SVEEHTAVIEAVVKHVAK----RVPVIAGTGANNTVEAIALSQAAEKAGADYT 106 (297)
T ss_dssp HHHHHTTC-CEEEESSTTTTGGGS---CHHHHHHHHHHHHHHHTT----SSCEEEECCCSSHHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHcCC-CEEEeCccccCcccC---CHHHHHHHHHHHHHHhCC----CCcEEEeCCCcCHHHHHHHHHHHHHcCCCEE
Confidence 55678999 999862111111111 122333333333333332 2688888777764444443 333444443
Q ss_pred ecccccccccCCCceeecCcchhHHHHHhcCC-Ccchh-hhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCCC
Q psy9039 120 RAESFVFGHMADEGLMNAQAGPLLRYRKQIGA-DNVLV-FTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNAT 197 (251)
Q Consensus 120 r~~~~~~~~~~~~Gli~~da~e~~~~r~~l~~-~~i~i-~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~ 197 (251)
-.- ..-...+..+++.++.+.+-. -++.+ ++++-...+.. .+.+.+.+.++.-.+- |-+.
T Consensus 107 lv~--------~P~y~~~~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~-----l~~~~~~~La~~pniv-----giKd 168 (297)
T 3flu_A 107 LSV--------VPYYNKPSQEGIYQHFKTIAEATSIPMIIYNVPGRTVVS-----MTNDTILRLAEIPNIV-----GVKE 168 (297)
T ss_dssp EEE--------CCCSSCCCHHHHHHHHHHHHHHCCSCEEEEECHHHHSSC-----CCHHHHHHHTTSTTEE-----EEEE
T ss_pred EEC--------CCCCCCCCHHHHHHHHHHHHHhCCCCEEEEECCchhccC-----CCHHHHHHHHcCCCEE-----EEEe
Confidence 321 111112234455555444311 12222 33333233443 2344444444322222 2221
Q ss_pred CCCCCHHHHHHHHhcC--CCCEEEecCCChHhHHHhhc-CCEEEEece
Q psy9039 198 GDPADVSQLMSVKNAV--DLPILIGSGVTSDNVEHYMT-ADALIIGSH 242 (251)
Q Consensus 198 g~~~~~~~l~~vr~~~--~~PV~vG~GI~~~~v~~~~~-ADGvIVGS~ 242 (251)
...++..+.++++.+ +.-|+.|. ..--...+.. ++|+|-|++
T Consensus 169 -ssgd~~~~~~~~~~~~~~f~v~~G~--d~~~l~~l~~G~~G~is~~a 213 (297)
T 3flu_A 169 -ASGNIGSNIELINRAPEGFVVLSGD--DHTALPFMLCGGHGVITVAA 213 (297)
T ss_dssp -CSCCHHHHHHHHHHSCTTCEEEECC--GGGHHHHHHTTCCEEEESGG
T ss_pred -CCCCHHHHHHHHHhcCCCeEEEECc--HHHHHHHHhCCCCEEEechH
Confidence 123566777776655 45555543 2222333444 999998865
No 270
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=85.51 E-value=1.7 Score=39.68 Aligned_cols=40 Identities=10% Similarity=0.280 Sum_probs=31.5
Q ss_pred CHHHHHHHHhcCCCCEEEecCCChHhHHHhhc--CCEEEEec
Q psy9039 202 DVSQLMSVKNAVDLPILIGSGVTSDNVEHYMT--ADALIIGS 241 (251)
Q Consensus 202 ~~~~l~~vr~~~~~PV~vG~GI~~~~v~~~~~--ADGvIVGS 241 (251)
.++.++++|+.+++||++.+-.+++.+..+.+ +|+++|+.
T Consensus 240 ~~~~i~~lr~~~~~PvivKgv~~~e~A~~a~~aGad~I~vs~ 281 (392)
T 2nzl_A 240 SWEDIKWLRRLTSLPIVAKGILRGDDAREAVKHGLNGILVSN 281 (392)
T ss_dssp CHHHHHHHC--CCSCEEEEEECCHHHHHHHHHTTCCEEEECC
T ss_pred HHHHHHHHHHhhCCCEEEEecCCHHHHHHHHHcCCCEEEeCC
Confidence 46789999999999999985448888888875 99999953
No 271
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=84.68 E-value=5.7 Score=34.66 Aligned_cols=149 Identities=10% Similarity=0.019 Sum_probs=74.7
Q ss_pred CcCCCCccEEEEe-----ecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCcc-EEEEEeeC----ChHHHHHHHHHc
Q psy9039 45 SVPVGVQHGVIVE-----NMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVP-VGVQILSG----CNKAALATAQAA 114 (251)
Q Consensus 45 l~~~Gv~D~i~ie-----N~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P-~Gvn~~~N----~~~~~~~ia~a~ 114 (251)
+.++|+ |.|.+- ..+|.| + -+|++..-|...++.+++.++ .| +.+.+=+. .+..++.-|
T Consensus 33 ~e~aG~-d~ilvGdSl~~~~lG~~--d---t~~vTldemi~h~~aV~r~~~--~~~vvaD~pfgsy~~s~~~a~~na--- 101 (275)
T 1o66_A 33 MDDAGV-EMLLVGDSLGMAVQGRK--S---TLPVSLRDMCYHTECVARGAK--NAMIVSDLPFGAYQQSKEQAFAAA--- 101 (275)
T ss_dssp HHHTTC-CEEEECTTHHHHTTCCS--S---STTCCHHHHHHHHHHHHHHCS--SSEEEEECCTTSSSSCHHHHHHHH---
T ss_pred HHHcCC-CEEEECHHHHHHHcCCC--C---CCCCCHHHHHHHHHHHHhhCC--CCeEEEECCCCCccCCHHHHHHHH---
Confidence 468999 999863 233332 2 367888889999999998877 44 44442220 111112111
Q ss_pred CccceecccccccccCCCceeecCcchhHHHHHhcCCCcchhhhhh--Hhhc-----cCCCCCCcccHHHHHHHhh---h
Q psy9039 115 GLDFIRAESFVFGHMADEGLMNAQAGPLLRYRKQIGADNVLVFTDI--KKKH-----SSHAITADVDITETAKAAS---F 184 (251)
Q Consensus 115 g~~Fir~~~~~~~~~~~~Gli~~da~e~~~~r~~l~~~~i~i~a~v--~~k~-----~~~~~~~~~~i~~~a~~a~---~ 184 (251)
.++++ .|.+|+-..+..+..+.-+.+-...|.+++.+ .|+. +.-....+.+.+++.+.|. .
T Consensus 102 -~rl~k--------aGa~aVklEdg~e~~~~I~al~~agIpV~gHiGLtPQs~~~~ggf~v~grt~~a~~~i~rA~a~~e 172 (275)
T 1o66_A 102 -AELMA--------AGAHMVKLEGGVWMAETTEFLQMRGIPVCAHIGLTPQSVFAFGGYKVQGRGGKAQALLNDAKAHDD 172 (275)
T ss_dssp -HHHHH--------TTCSEEEEECSGGGHHHHHHHHHTTCCEEEEEESCGGGTTC-----------CHHHHHHHHHHHHH
T ss_pred -HHHHH--------cCCcEEEECCcHHHHHHHHHHHHcCCCeEeeeccCceeecccCCeEEEeChHHHHHHHHHHHHHHH
Confidence 13333 22344333333333322222222244443211 2221 0000011123345555554 3
Q ss_pred ccccEEEecCCCCCCCCCHHHHHHHHhcCCCCEEE
Q psy9039 185 FLSDGLIITGNATGDPADVSQLMSVKNAVDLPILI 219 (251)
Q Consensus 185 ~~~D~v~VTG~~~g~~~~~~~l~~vr~~~~~PV~v 219 (251)
.|||++++-+.. .++.+++.+.+++|++-
T Consensus 173 AGA~~ivlE~vp------~~~a~~it~~l~iP~ig 201 (275)
T 1o66_A 173 AGAAVVLMECVL------AELAKKVTETVSCPTIG 201 (275)
T ss_dssp TTCSEEEEESCC------HHHHHHHHHHCSSCEEE
T ss_pred cCCcEEEEecCC------HHHHHHHHHhCCCCEEE
Confidence 699999997742 35677888889999874
No 272
>3kxq_A Triosephosphate isomerase; ssgcid, NIH, niaid, SBRI, UW, gluconeogenesis, glycolysis, pentose shunt; 1.60A {Bartonella henselae}
Probab=84.67 E-value=0.42 Score=41.91 Aligned_cols=29 Identities=21% Similarity=0.456 Sum_probs=26.8
Q ss_pred CCCEEEecCCChHhHHHhhc---CCEEEEece
Q psy9039 214 DLPILIGSGVTSDNVEHYMT---ADALIIGSH 242 (251)
Q Consensus 214 ~~PV~vG~GI~~~~v~~~~~---ADGvIVGS~ 242 (251)
++||+-||.++++|+++++. .||+.||.+
T Consensus 227 ~~rIlYGGSV~~~Na~el~~~~dIDG~LVGgA 258 (275)
T 3kxq_A 227 KIRLLYGGSVKPSNAFELLSTAHVNGALIGGA 258 (275)
T ss_dssp TSCEEECSCCCTTTHHHHHTSTTCCEEEESGG
T ss_pred cceEEEcCCcCHhHHHHHHcCCccceEEeehh
Confidence 58999999999999999994 999999965
No 273
>3dxi_A Putative aldolase; TIM barrel, 11107N, PSI2, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Bacteroides vulgatus atcc 8482}
Probab=84.32 E-value=2 Score=38.24 Aligned_cols=168 Identities=12% Similarity=0.049 Sum_probs=82.8
Q ss_pred CCCcCCCCccEEEEeecCCCCccccCC--C-chHHHHHHHHHHHHHHHhCCCCccEEEEEeeCCh-----HHHHHHHHHc
Q psy9039 43 PPSVPVGVQHGVIVENMHDVPYVLEAE--S-GPEITANMTRLCAEIRKVLPPSVPVGVQILSGCN-----KAALATAQAA 114 (251)
Q Consensus 43 ~~l~~~Gv~D~i~ieN~~~~Pf~~p~~--~-gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~-----~~~~~ia~a~ 114 (251)
+.|.+.|+ |.||+ |.|- .|-+ + .|-. +-...++++++... .++..++ .|.+ +..+-.+.+.
T Consensus 31 ~~L~~aGv-~~IEv----g~~~-~p~~~f~~~~~~--~~~e~l~~i~~~~~--~~~~~L~-r~~~~~~~dv~~~~~a~~~ 99 (320)
T 3dxi_A 31 LAMNELPI-DYLEV----GYRN-KPSKEYMGKFGY--TPVSVLKHLRNIST--KKIAIML-NEKNTTPEDLNHLLLPIIG 99 (320)
T ss_dssp HHHHTTTC-CEEEE----EECC-SCCSSCCCHHHH--CCHHHHHHHHHHCC--SEEEEEE-EGGGCCGGGHHHHHGGGTT
T ss_pred HHHHHhCC-CEEEE----eccc-CCcccccccccc--ChHHHHHHHhhccC--CeEEEEe-cCCCCChhhHHHHHHhhhc
Confidence 56888999 99986 5442 2211 0 1211 11345566666433 4776664 3321 3333333445
Q ss_pred CccceecccccccccCCCceeecCcchhHHHHHhcCCCcchh-hhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEec
Q psy9039 115 GLDFIRAESFVFGHMADEGLMNAQAGPLLRYRKQIGADNVLV-FTDIKKKHSSHAITADVDITETAKAASFFLSDGLIIT 193 (251)
Q Consensus 115 g~~Fir~~~~~~~~~~~~Gli~~da~e~~~~r~~l~~~~i~i-~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VT 193 (251)
|.+.+|+.. .... ...+.+..++.++.|.+ +.. +.+.. +....+..+..+.+ ...|+|.+.+.
T Consensus 100 Gvd~~ri~~----~~~n----le~~~~~v~~ak~~G~~-v~~~~~~~~-----~~~~~~~~l~~~~~--~~~G~~~i~l~ 163 (320)
T 3dxi_A 100 LVDMIRIAI----DPQN----IDRAIVLAKAIKTMGFE-VGFNVMYMS-----KWAEMNGFLSKLKA--IDKIADLFCMV 163 (320)
T ss_dssp TCSEEEEEE----CGGG----HHHHHHHHHHHHTTTCE-EEEEECCTT-----TGGGSTTSGGGGGG--GTTTCSEEEEE
T ss_pred CCCEEEEEe----cHHH----HHHHHHHHHHHHHCCCE-EEEEEEeCC-----CCCCHHHHHHHHHH--hhCCCCEEEEC
Confidence 556666421 0000 11134455566777652 322 22211 11011112222211 13589998886
Q ss_pred CCCCCCCC-CH-HHHHHHHhcCCCCEEEe----cCCChHh-HHHhhc-CCEE
Q psy9039 194 GNATGDPA-DV-SQLMSVKNAVDLPILIG----SGVTSDN-VEHYMT-ADAL 237 (251)
Q Consensus 194 G~~~g~~~-~~-~~l~~vr~~~~~PV~vG----~GI~~~~-v~~~~~-ADGv 237 (251)
.+.-...| .. ++++.+|+.+++|+-+- +|....| ++.+.. ||-+
T Consensus 164 Dt~G~~~P~~~~~lv~~l~~~~~~~i~~H~Hn~~G~a~an~laA~~aGa~~v 215 (320)
T 3dxi_A 164 DSFGGITPKEVKNLLKEVRKYTHVPVGFHGHDNLQLGLINSITAIDDGIDFI 215 (320)
T ss_dssp CTTSCCCHHHHHHHHHHHHHHCCSCEEEECBCTTSCHHHHHHHHHHTTCSEE
T ss_pred cccCCCCHHHHHHHHHHHHHhCCCeEEEEeCCCCccHHHHHHHHHHhCCCEE
Confidence 65322223 23 67888999888998888 7885555 444434 6643
No 274
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=84.28 E-value=0.54 Score=36.45 Aligned_cols=53 Identities=13% Similarity=0.071 Sum_probs=38.5
Q ss_pred CcccHHHHHHHhhhccccEEEecCCCCCCCCCH-HHHHHHHhcC--CCCEEEecCC
Q psy9039 171 ADVDITETAKAASFFLSDGLIITGNATGDPADV-SQLMSVKNAV--DLPILIGSGV 223 (251)
Q Consensus 171 ~~~~i~~~a~~a~~~~~D~v~VTG~~~g~~~~~-~~l~~vr~~~--~~PV~vG~GI 223 (251)
.+.+.+++++.+....+|.+++|...+...... +.++.+|+.. ++||++||..
T Consensus 39 ~~~p~e~~v~~a~~~~~d~v~lS~~~~~~~~~~~~~i~~l~~~g~~~i~v~vGG~~ 94 (137)
T 1ccw_A 39 VLSPQELFIKAAIETKADAILVSSLYGQGEIDCKGLRQKCDEAGLEGILLYVGGNI 94 (137)
T ss_dssp EEECHHHHHHHHHHHTCSEEEEEECSSTHHHHHTTHHHHHHHTTCTTCEEEEEESC
T ss_pred CCCCHHHHHHHHHhcCCCEEEEEecCcCcHHHHHHHHHHHHhcCCCCCEEEEECCC
Confidence 356788888888878999999998765332222 4566777653 6999999875
No 275
>1req_A Methylmalonyl-COA mutase; isomerase, intramolecular transferase; HET: B12 DCA; 2.00A {Propionibacterium freudenreichii subspshermanii} SCOP: c.1.19.1 c.23.6.1 PDB: 2req_A* 3req_A* 4req_A* 6req_A* 7req_A* 5req_A* 1e1c_A*
Probab=84.14 E-value=0.92 Score=44.92 Aligned_cols=70 Identities=16% Similarity=0.061 Sum_probs=48.5
Q ss_pred CCcccHHHHHHHhhhccccEEEecCCCCCCCCCH-HHHHHHHhcC--CCCEEEecCCChHhHHHhhc--CCEEEE
Q psy9039 170 TADVDITETAKAASFFLSDGLIITGNATGDPADV-SQLMSVKNAV--DLPILIGSGVTSDNVEHYMT--ADALII 239 (251)
Q Consensus 170 ~~~~~i~~~a~~a~~~~~D~v~VTG~~~g~~~~~-~~l~~vr~~~--~~PV~vG~GI~~~~v~~~~~--ADGvIV 239 (251)
..+.+.+++++.+....+|.+++|+..+.....+ +.++.+|+.- ++||++||.+-.+....+.. +|+++-
T Consensus 631 G~~v~~eeiv~aA~e~~adiVglSsl~~~~~~~~~~vi~~L~~~G~~~i~VivGG~~p~~d~~~l~~~GaD~~f~ 705 (727)
T 1req_A 631 PLFQTPEETARQAVEADVHVVGVSSLAGGHLTLVPALRKELDKLGRPDILITVGGVIPEQDFDELRKDGAVEIYT 705 (727)
T ss_dssp CTTBCHHHHHHHHHHTTCSEEEEEECSSCHHHHHHHHHHHHHHTTCTTSEEEEEESCCGGGHHHHHHTTEEEEEC
T ss_pred CCCCCHHHHHHHHHHcCCCEEEEeeecHhHHHHHHHHHHHHHhcCCCCCEEEEcCCCccccHHHHHhCCCCEEEc
Confidence 3456788888888888999999999865443333 5566777764 68998888674443333332 888775
No 276
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=84.10 E-value=1.5 Score=38.73 Aligned_cols=58 Identities=16% Similarity=0.145 Sum_probs=36.8
Q ss_pred hccccEEEecCCCCCCCC--CH----HHHHHHHhcC--CCCEEEecCC-ChHh-HH---Hhhc--CCEEEEece
Q psy9039 184 FFLSDGLIITGNATGDPA--DV----SQLMSVKNAV--DLPILIGSGV-TSDN-VE---HYMT--ADALIIGSH 242 (251)
Q Consensus 184 ~~~~D~v~VTG~~~g~~~--~~----~~l~~vr~~~--~~PV~vG~GI-~~~~-v~---~~~~--ADGvIVGS~ 242 (251)
..|+|++++.|+ ||+.. +. +.++.+++.+ ++||++|-|- +.++ ++ .+.+ |||+.+-+-
T Consensus 40 ~~Gv~gl~v~Gt-TGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 112 (309)
T 3fkr_A 40 DAGSDGLCILAN-FSEQFAITDDERDVLTRTILEHVAGRVPVIVTTSHYSTQVCAARSLRAQQLGAAMVMAMPP 112 (309)
T ss_dssp HTTCSCEEESSG-GGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEECCS
T ss_pred HcCCCEEEECcc-ccCcccCCHHHHHHHHHHHHHHhCCCCcEEEecCCchHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 369999999886 35432 11 3355555554 6999999886 5433 33 2223 999988753
No 277
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=83.72 E-value=4.5 Score=37.02 Aligned_cols=115 Identities=13% Similarity=0.205 Sum_probs=68.2
Q ss_pred HHHHHHcCccceecccccccccCCCceeecCcc----------hhHHHHHh--cCCCcchhhhhhHhhccCCCCCCcccH
Q psy9039 108 LATAQAAGLDFIRAESFVFGHMADEGLMNAQAG----------PLLRYRKQ--IGADNVLVFTDIKKKHSSHAITADVDI 175 (251)
Q Consensus 108 ~~ia~a~g~~Fir~~~~~~~~~~~~Gli~~da~----------e~~~~r~~--l~~~~i~i~a~v~~k~~~~~~~~~~~i 175 (251)
...|+..|++.++--.|. .+-++.+++. .+.+..++ ++.+..+.+.+...+.|+++.++.-..
T Consensus 50 i~~Ak~aGAdavKfQ~~k-----~~tl~s~~~~~fq~~~~~~~~~ye~~~~~~l~~e~~~~L~~~~~~~Gi~~~stpfD~ 124 (385)
T 1vli_A 50 IDAAAEAGADAVKFQMFQ-----ADRMYQKDPGLYKTAAGKDVSIFSLVQSMEMPAEWILPLLDYCREKQVIFLSTVCDE 124 (385)
T ss_dssp HHHHHHHTCSEEEECCBC-----GGGGTSCCC---------CCCHHHHGGGBSSCGGGHHHHHHHHHHTTCEEECBCCSH
T ss_pred HHHHHHhCCCEEeeeeec-----cCcccCcchhhhccCCCCCccHHHHHHhcCCCHHHHHHHHHHHHHcCCcEEEccCCH
Confidence 555666888888853222 2222222220 12233443 556777888888888888875555544
Q ss_pred HHHHHHhhhccccEEEecCCCCCCCCCHHHHHHHHhcCCCCEEEecCC-ChHhHHHhh
Q psy9039 176 TETAKAASFFLSDGLIITGNATGDPADVSQLMSVKNAVDLPILIGSGV-TSDNVEHYM 232 (251)
Q Consensus 176 ~~~a~~a~~~~~D~v~VTG~~~g~~~~~~~l~~vr~~~~~PV~vG~GI-~~~~v~~~~ 232 (251)
..+ +....+++|.+=|- ++.-.+..+|+++-+ +.+||++-.|. |-+.+..+.
T Consensus 125 ~sv-d~l~~~~vd~~KIg---S~~~~N~pLL~~va~-~gKPViLStGmaTl~Ei~~Av 177 (385)
T 1vli_A 125 GSA-DLLQSTSPSAFKIA---SYEINHLPLLKYVAR-LNRPMIFSTAGAEISDVHEAW 177 (385)
T ss_dssp HHH-HHHHTTCCSCEEEC---GGGTTCHHHHHHHHT-TCSCEEEECTTCCHHHHHHHH
T ss_pred HHH-HHHHhcCCCEEEEC---cccccCHHHHHHHHh-cCCeEEEECCCCCHHHHHHHH
Confidence 333 33344678887442 123446788887755 68999999999 666655443
No 278
>3obk_A Delta-aminolevulinic acid dehydratase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, lyase; HET: PBG; 2.50A {Toxoplasma gondii ME49}
Probab=83.71 E-value=5.6 Score=35.74 Aligned_cols=31 Identities=19% Similarity=0.331 Sum_probs=23.8
Q ss_pred ccccEEEecCCCCCCCCCHHHHHHHHhcCCCCEEE
Q psy9039 185 FLSDGLIITGNATGDPADVSQLMSVKNAVDLPILI 219 (251)
Q Consensus 185 ~~~D~v~VTG~~~g~~~~~~~l~~vr~~~~~PV~v 219 (251)
-|+|.+.|- .+ -+-++.|+++|+.+++|+.+
T Consensus 259 EGAD~vMVK---Pa-l~YLDIi~~vk~~~~~Pvaa 289 (356)
T 3obk_A 259 EGADMLMVK---PG-LPYLDVLAKIREKSKLPMVA 289 (356)
T ss_dssp TTCSEEEEE---SS-GGGHHHHHHHHHHCSSCEEE
T ss_pred cCCCEEEec---CC-CcHHHHHHHHHhcCCCCEEE
Confidence 499999883 22 22368899999999999985
No 279
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=83.61 E-value=4.6 Score=35.29 Aligned_cols=172 Identities=13% Similarity=0.051 Sum_probs=87.4
Q ss_pred CCCcCCCCccEEEEeec---CCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeCChHHHHHHHHHcCccce
Q psy9039 43 PPSVPVGVQHGVIVENM---HDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQILSGCNKAALATAQAAGLDFI 119 (251)
Q Consensus 43 ~~l~~~Gv~D~i~ieN~---~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~~~~~~ia~a~g~~Fi 119 (251)
+.|.+.|+ |.|++-.+ -.+||.. + ...+++.+++..+ +|+.+.+ .| ...+..|...|.+.+
T Consensus 37 ~~L~~~Gv-~~IE~g~~~~~~~~~~~~----d------~~~~~~~~~~~~~--~~~~~l~-~~--~~~i~~a~~aG~~~v 100 (302)
T 2ftp_A 37 DDLSAAGL-DYIEVGSFVSPKWVPQMA----G------SAEVFAGIRQRPG--VTYAALA-PN--LKGFEAALESGVKEV 100 (302)
T ss_dssp HHHHHTTC-SEEEEEECSCTTTCGGGT----T------HHHHHHHSCCCTT--SEEEEEC-CS--HHHHHHHHHTTCCEE
T ss_pred HHHHHcCc-CEEEECCCcCcccccccc----C------HHHHHHHhhhcCC--CEEEEEe-CC--HHHHHHHHhCCcCEE
Confidence 66788999 99987421 1123321 1 1223445544333 5777665 34 445566666777766
Q ss_pred ecccccccc---------cCCCceeecCcchhHHHHHhcCCCcchh-hhhh-HhhccCCCCCCcccHHHHHHHhhhcccc
Q psy9039 120 RAESFVFGH---------MADEGLMNAQAGPLLRYRKQIGADNVLV-FTDI-KKKHSSHAITADVDITETAKAASFFLSD 188 (251)
Q Consensus 120 r~~~~~~~~---------~~~~Gli~~da~e~~~~r~~l~~~~i~i-~a~v-~~k~~~~~~~~~~~i~~~a~~a~~~~~D 188 (251)
+.. .... .+.+ -......+..++.++.|. .+.. +..+ ....... ++.+...+.++.+...|+|
T Consensus 101 ~i~--~~~s~~~~~~~~~~s~e-e~l~~~~~~v~~a~~~G~-~V~~~l~~~~~~e~~~~--~~~~~~~~~~~~~~~~G~d 174 (302)
T 2ftp_A 101 AVF--AAASEAFSQRNINCSIK-DSLERFVPVLEAARQHQV-RVRGYISCVLGCPYDGD--VDPRQVAWVARELQQMGCY 174 (302)
T ss_dssp EEE--EESCHHHHHHHHSSCHH-HHHHHHHHHHHHHHHTTC-EEEEEEECTTCBTTTBC--CCHHHHHHHHHHHHHTTCS
T ss_pred EEE--EecCHHHHHHHhCCCHH-HHHHHHHHHHHHHHHCCC-eEEEEEEEEeeCCcCCC--CCHHHHHHHHHHHHHcCCC
Confidence 641 1100 0000 000114566777777775 2320 0000 0000001 2334445555555567999
Q ss_pred EEEecCCCCCCC-C-C-HHHHHHHHhcC-CCCEEE----ecCCChHhHHHhhc--CCEE
Q psy9039 189 GLIITGNATGDP-A-D-VSQLMSVKNAV-DLPILI----GSGVTSDNVEHYMT--ADAL 237 (251)
Q Consensus 189 ~v~VTG~~~g~~-~-~-~~~l~~vr~~~-~~PV~v----G~GI~~~~v~~~~~--ADGv 237 (251)
.+.+.-+ .|.. | . .++++++|+.+ ++|+-+ .+|+...|....+. ++-+
T Consensus 175 ~i~l~DT-~G~~~P~~~~~lv~~l~~~~~~~~l~~H~Hn~~Gla~An~laAv~aGa~~v 232 (302)
T 2ftp_A 175 EVSLGDT-IGVGTAGATRRLIEAVASEVPRERLAGHFHDTYGQALANIYASLLEGIAVF 232 (302)
T ss_dssp EEEEEES-SSCCCHHHHHHHHHHHTTTSCGGGEEEEEBCTTSCHHHHHHHHHHTTCCEE
T ss_pred EEEEeCC-CCCcCHHHHHHHHHHHHHhCCCCeEEEEeCCCccHHHHHHHHHHHhCCCEE
Confidence 9887622 2332 2 2 36788888888 588876 46776677665554 6544
No 280
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=83.53 E-value=0.9 Score=38.16 Aligned_cols=39 Identities=8% Similarity=0.134 Sum_probs=32.4
Q ss_pred HHHHHHHHhcCCCCEEEecCCCh-------HhHHHhhc--CCEEEEec
Q psy9039 203 VSQLMSVKNAVDLPILIGSGVTS-------DNVEHYMT--ADALIIGS 241 (251)
Q Consensus 203 ~~~l~~vr~~~~~PV~vG~GI~~-------~~v~~~~~--ADGvIVGS 241 (251)
.+.++++|+.+++||.++.++++ +.++.++. ||++++++
T Consensus 69 ~~~i~~i~~~~~~pv~~~~~~~~~~~~~~~~~~~~~~~~Gad~v~~~~ 116 (248)
T 1geq_A 69 FWIVKEFRRHSSTPIVLMTYYNPIYRAGVRNFLAEAKASGVDGILVVD 116 (248)
T ss_dssp HHHHHHHHTTCCCCEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEETT
T ss_pred HHHHHHHHhhCCCCEEEEeccchhhhcCHHHHHHHHHHCCCCEEEECC
Confidence 57788999999999999888776 55777765 99999996
No 281
>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.23.6.1 d.230.4.1
Probab=83.25 E-value=1.7 Score=37.74 Aligned_cols=68 Identities=15% Similarity=0.126 Sum_probs=46.3
Q ss_pred CCcccHHHHHHHhhhccccEEEecCCCCCC---CCCH-HHHHHHHhcC---CCCEEEecCC-ChHhHHHhhcCCEEE
Q psy9039 170 TADVDITETAKAASFFLSDGLIITGNATGD---PADV-SQLMSVKNAV---DLPILIGSGV-TSDNVEHYMTADALI 238 (251)
Q Consensus 170 ~~~~~i~~~a~~a~~~~~D~v~VTG~~~g~---~~~~-~~l~~vr~~~---~~PV~vG~GI-~~~~v~~~~~ADGvI 238 (251)
..+.+.+++.+.+....+|++++|...+.. ...+ +.++++|+.. ++||++||.. +++-+. .+.+|+..
T Consensus 164 G~~vp~e~iv~aa~e~~~d~VglS~l~t~~~~~~~~~~~~i~~L~~~g~~~~i~vivGG~~~~~~~a~-~iGad~~~ 239 (262)
T 1xrs_B 164 GSQVANEDFIKKAVELEADVLLVSQTVTQKNVHIQNMTHLIELLEAEGLRDRFVLLCGGPRINNEIAK-ELGYDAGF 239 (262)
T ss_dssp CSSBCHHHHHHHHHHTTCSEEEEECCCCTTSHHHHHHHHHHHHHHHTTCGGGSEEEEECTTCCHHHHH-TTTCSEEE
T ss_pred CCCCCHHHHHHHHHHcCCCEEEEEeecCCccchHHHHHHHHHHHHhcCCCCCCEEEEECCcCCHHHHH-HcCCeEEE
Confidence 445788888888888899999999987642 2222 4566777653 3899999988 544433 33377653
No 282
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=83.10 E-value=2.4 Score=36.07 Aligned_cols=55 Identities=22% Similarity=0.239 Sum_probs=38.9
Q ss_pred HHhhhccccEEEe-cCCC-CCCCCCHHHHHHHHhcC--CCCEEEecCC-ChHhHHHhhc--CC
Q psy9039 180 KAASFFLSDGLII-TGNA-TGDPADVSQLMSVKNAV--DLPILIGSGV-TSDNVEHYMT--AD 235 (251)
Q Consensus 180 ~~a~~~~~D~v~V-TG~~-~g~~~~~~~l~~vr~~~--~~PV~vG~GI-~~~~v~~~~~--AD 235 (251)
+.+...|+|.+=+ ||.. ++ ..+.+.++.+|+.+ ++||-+.||| |.+++.+++. |+
T Consensus 153 ~ia~~aGADfVKTSTGf~~~~-gAt~edv~lm~~~v~~~v~VKaaGGIrt~~~a~~~i~aGa~ 214 (231)
T 3ndo_A 153 RVARDAGADFVKTSTGFHPSG-GASVQAVEIMARTVGERLGVKASGGIRTAEQAAAMLDAGAT 214 (231)
T ss_dssp HHHHHTTCSEEECCCSCCTTC-SCCHHHHHHHHHHHTTTSEEEEESSCCSHHHHHHHHHTTCS
T ss_pred HHHHHHCcCEEEcCCCCCCCC-CCCHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHhcch
Confidence 3344579999844 5654 33 33466666666654 6999999999 6899999986 77
No 283
>2xij_A Methylmalonyl-COA mutase, mitochondrial; isomerase, organic aciduria, vitamin B12; HET: B12 5AD BTB; 1.95A {Homo sapiens} PDB: 2xiq_A* 3bic_A
Probab=82.82 E-value=1.5 Score=43.73 Aligned_cols=69 Identities=13% Similarity=0.085 Sum_probs=47.3
Q ss_pred CcccHHHHHHHhhhccccEEEecCCCCCCCCCH-HHHHHHHhcC--CCCEEEecCCChHhHHHhhc--CCEEEE
Q psy9039 171 ADVDITETAKAASFFLSDGLIITGNATGDPADV-SQLMSVKNAV--DLPILIGSGVTSDNVEHYMT--ADALII 239 (251)
Q Consensus 171 ~~~~i~~~a~~a~~~~~D~v~VTG~~~g~~~~~-~~l~~vr~~~--~~PV~vG~GI~~~~v~~~~~--ADGvIV 239 (251)
.+.+.+++++.+....+|.+++|+..+...... +.++.+|+.- ++||++||-+-.++...+.. +|+++-
T Consensus 640 ~~v~~eeiv~aA~e~~adiVglSsl~~~~~~~~~~vi~~Lr~~G~~dv~VivGG~~P~~d~~~l~~~GaD~~f~ 713 (762)
T 2xij_A 640 LFQTPREVAQQAVDADVHAVGVSTLAAGHKTLVPELIKELNSLGRPDILVMCGGVIPPQDYEFLFEVGVSNVFG 713 (762)
T ss_dssp TTCCHHHHHHHHHHTTCSEEEEEECSSCHHHHHHHHHHHHHHTTCTTSEEEEEESCCGGGHHHHHHHTCCEEEC
T ss_pred CCCCHHHHHHHHHHcCCCEEEEeeecHHHHHHHHHHHHHHHhcCCCCCEEEEeCCCCcccHHHHHhCCCCEEeC
Confidence 446788888888888999999998866443333 5566777764 68888887553333333333 998875
No 284
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=82.63 E-value=3 Score=37.75 Aligned_cols=40 Identities=8% Similarity=0.257 Sum_probs=33.8
Q ss_pred CHHHHHHHHhcCCCCEEEecCCChHhHHHhhc--CCEEEEec
Q psy9039 202 DVSQLMSVKNAVDLPILIGSGVTSDNVEHYMT--ADALIIGS 241 (251)
Q Consensus 202 ~~~~l~~vr~~~~~PV~vG~GI~~~~v~~~~~--ADGvIVGS 241 (251)
.++.++.+|+.+++||++-+-.+++.+..+.+ +|+++|..
T Consensus 217 ~~~~i~~lr~~~~~PvivK~v~~~e~a~~a~~~Gad~I~vs~ 258 (368)
T 2nli_A 217 SPRDIEEIAGHSGLPVFVKGIQHPEDADMAIKRGASGIWVSN 258 (368)
T ss_dssp CHHHHHHHHHHSSSCEEEEEECSHHHHHHHHHTTCSEEEECC
T ss_pred hHHHHHHHHHHcCCCEEEEcCCCHHHHHHHHHcCCCEEEEcC
Confidence 46789999999999999985558888888875 99999954
No 285
>3kp1_A D-ornithine aminomutase E component; 5 aminomutase (OAM), metal binding protein; HET: PLP B12 5AD; 2.01A {Clostridium sticklandii} PDB: 3kow_A* 3koy_A* 3koz_A* 3kp0_A* 3kox_A*
Probab=82.52 E-value=1.6 Score=42.68 Aligned_cols=70 Identities=14% Similarity=0.074 Sum_probs=48.5
Q ss_pred CCCcccHHHHHHHhhhccccEEEecCCCCCC---CCCH-HHHHHHHhcC---CCCEEEecCCChHhHHHhhcCCEEE
Q psy9039 169 ITADVDITETAKAASFFLSDGLIITGNATGD---PADV-SQLMSVKNAV---DLPILIGSGVTSDNVEHYMTADALI 238 (251)
Q Consensus 169 ~~~~~~i~~~a~~a~~~~~D~v~VTG~~~g~---~~~~-~~l~~vr~~~---~~PV~vG~GI~~~~v~~~~~ADGvI 238 (251)
...+.+.+++++.+....+|.+++|+.-+.. -..+ +.++.+|+.- ++||++||.+-.+..++.+.||+..
T Consensus 640 LGvdVPpEeIVeAA~EedADVVGLSsLLTt~dihL~~MkevIelLrE~GlrDkIkVIVGGa~~tqd~AkeIGADa~f 716 (763)
T 3kp1_A 640 LGTSVPVEKLVDAAIELKADAILASTIISHDDIHYKNMKRIHELAVEKGIRDKIMIGCGGTQVTPEVAVKQGVDAGF 716 (763)
T ss_dssp CCSSBCHHHHHHHHHHTTCSEEEEECCCCGGGHHHHHHHHHHHHHHHTTCTTTSEEEEECTTCCHHHHHTTTCSEEE
T ss_pred CCCCCCHHHHHHHHHHcCCCEEEEeccccCchhhHHHHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHcCCcEEE
Confidence 3556888999988888899999999876652 1223 4566777663 3899999988434444444487753
No 286
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=81.89 E-value=3.4 Score=37.18 Aligned_cols=60 Identities=17% Similarity=0.210 Sum_probs=44.0
Q ss_pred HHHHHhhhccccEEEecCCCCCCCCCHHHHHHHHhcCCCCEEEecCC-ChHhHHHhhc---CCEEEEe
Q psy9039 177 ETAKAASFFLSDGLIITGNATGDPADVSQLMSVKNAVDLPILIGSGV-TSDNVEHYMT---ADALIIG 240 (251)
Q Consensus 177 ~~a~~a~~~~~D~v~VTG~~~g~~~~~~~l~~vr~~~~~PV~vG~GI-~~~~v~~~~~---ADGvIVG 240 (251)
+.++..+.++++.+- - .-.+.+.+.++++|+.+++||+.+..+ +++.+.++++ +|.+.+.
T Consensus 208 ~~~~~l~~~~i~~iE--q--P~~~~~~~~~~~l~~~~~iPI~~de~i~~~~~~~~~i~~~~~d~v~ik 271 (384)
T 2pgw_A 208 NMCRKLEKYDIEFIE--Q--PTVSWSIPAMAHVREKVGIPIVADQAAFTLYDVYEICRQRAADMICIG 271 (384)
T ss_dssp HHHHHHGGGCCSEEE--C--CSCTTCHHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHTTCCSEEEEC
T ss_pred HHHHHHHhcCCCEEe--C--CCChhhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEEc
Confidence 344444457888753 1 112236788999999999999999999 6899999883 9999874
No 287
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=81.61 E-value=3.2 Score=35.49 Aligned_cols=89 Identities=16% Similarity=0.110 Sum_probs=52.6
Q ss_pred cchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEe-cCCCCCCCCCHHHHHHHHhcC--CC
Q psy9039 139 AGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLII-TGNATGDPADVSQLMSVKNAV--DL 215 (251)
Q Consensus 139 a~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~V-TG~~~g~~~~~~~l~~vr~~~--~~ 215 (251)
..++...++..+...+|++- +.+ . .+++.+....+.+...|+|.+=+ ||..++. .+.+.++.+|+.+ ++
T Consensus 130 ~~eI~~v~~a~~~~~lKVIl----Et~--~-Lt~eei~~a~~ia~~aGADfVKTSTGf~~gg-At~~dv~lmr~~vg~~v 201 (239)
T 3ngj_A 130 EKDVKAVVDASGKALTKVII----ECC--Y-LTNEEKVEVCKRCVAAGAEYVKTSTGFGTHG-ATPEDVKLMKDTVGDKA 201 (239)
T ss_dssp HHHHHHHHHHHTTSEEEEEC----CGG--G-SCHHHHHHHHHHHHHHTCSEEECCCSSSSCC-CCHHHHHHHHHHHGGGS
T ss_pred HHHHHHHHHHhcCCceEEEE----ecC--C-CCHHHHHHHHHHHHHHCcCEEECCCCCCCCC-CCHHHHHHHHHhhCCCc
Confidence 34455555555433455542 111 1 12223333334444579999866 4765443 3456666666554 69
Q ss_pred CEEEecCC-ChHhHHHhhc--CC
Q psy9039 216 PILIGSGV-TSDNVEHYMT--AD 235 (251)
Q Consensus 216 PV~vG~GI-~~~~v~~~~~--AD 235 (251)
||-+.||| |.+++.+++. |+
T Consensus 202 ~VKasGGIrt~~da~~~i~aGA~ 224 (239)
T 3ngj_A 202 LVKAAGGIRTFDDAMKMINNGAS 224 (239)
T ss_dssp EEEEESSCCSHHHHHHHHHTTEE
T ss_pred eEEEeCCCCCHHHHHHHHHhccc
Confidence 99999999 6899999886 65
No 288
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=81.20 E-value=4.3 Score=34.12 Aligned_cols=124 Identities=16% Similarity=0.093 Sum_probs=66.3
Q ss_pred HHHHHHcCccceecccccccccCCCceeecCcchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccc
Q psy9039 108 LATAQAAGLDFIRAESFVFGHMADEGLMNAQAGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLS 187 (251)
Q Consensus 108 ~~ia~a~g~~Fir~~~~~~~~~~~~Gli~~da~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~ 187 (251)
..-|...|++-+-.-...|.. -+|-+..-..++.+.++..+...++++-.. +. + + ++-+...++.+...|+
T Consensus 77 ~~~Ai~~GAdevd~vinig~~--~~g~~~~v~~ei~~v~~a~~~~~lkvIlet----~~-l-~-~e~i~~a~~ia~eaGA 147 (220)
T 1ub3_A 77 AALACARGADEVDMVLHLGRA--KAGDLDYLEAEVRAVREAVPQAVLKVILET----GY-F-S-PEEIARLAEAAIRGGA 147 (220)
T ss_dssp HHHHHHTTCSEEEEECCHHHH--HTTCHHHHHHHHHHHHHHSTTSEEEEECCG----GG-S-C-HHHHHHHHHHHHHHTC
T ss_pred HHHHHHcCCCEEEecccchhh--hCCCHHHHHHHHHHHHHHHcCCCceEEEec----CC-C-C-HHHHHHHHHHHHHhCC
Confidence 444555677665542222211 011121124455566666654456644211 11 1 1 2223333344445799
Q ss_pred cEEEe-cCCCCCCCCCHHHHHHHHh--cCCCCEEEecCC-ChHhHHHhhc--CC--EEEEec
Q psy9039 188 DGLII-TGNATGDPADVSQLMSVKN--AVDLPILIGSGV-TSDNVEHYMT--AD--ALIIGS 241 (251)
Q Consensus 188 D~v~V-TG~~~g~~~~~~~l~~vr~--~~~~PV~vG~GI-~~~~v~~~~~--AD--GvIVGS 241 (251)
|.+=+ ||..++. .+.+.++.+++ ..++||-+.||| |.+++.+++. |+ |+-.|-
T Consensus 148 DfVKTsTGf~~~g-at~~dv~~m~~~vg~~v~VkaaGGirt~~~al~~i~aGa~RiG~S~g~ 208 (220)
T 1ub3_A 148 DFLKTSTGFGPRG-ASLEDVALLVRVAQGRAQVKAAGGIRDRETALRMLKAGASRLGTSSGV 208 (220)
T ss_dssp SEEECCCSSSSCC-CCHHHHHHHHHHHTTSSEEEEESSCCSHHHHHHHHHTTCSEEEETTHH
T ss_pred CEEEeCCCCCCCC-CCHHHHHHHHHhhCCCCeEEEECCCCCHHHHHHHHHCCCcccchhHHH
Confidence 99854 4665443 34555555555 357999999999 6888888886 88 554433
No 289
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=80.90 E-value=8 Score=34.04 Aligned_cols=170 Identities=12% Similarity=0.117 Sum_probs=75.6
Q ss_pred CCCcCCCCccEEEEe-ecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeCChHHHHHHH---HHcCccc
Q psy9039 43 PPSVPVGVQHGVIVE-NMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQILSGCNKAALATA---QAAGLDF 118 (251)
Q Consensus 43 ~~l~~~Gv~D~i~ie-N~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~~~~~~ia---~a~g~~F 118 (251)
+-|++.|+ |||.+- .-+-.|.- .-.+..+-+..+++.++. .+|+.+.+-.|....+...+ ...|++.
T Consensus 51 ~~li~~Gv-~Gl~v~GtTGE~~~L----s~~Er~~v~~~~v~~~~g----rvpViaGvg~~st~eai~la~~A~~~Gada 121 (314)
T 3qze_A 51 DFHLQEGT-NAIVAVGTTGESATL----DVEEHIQVIRRVVDQVKG----RIPVIAGTGANSTREAVALTEAAKSGGADA 121 (314)
T ss_dssp HHHHHHTC-CEEEESSGGGTGGGC----CHHHHHHHHHHHHHHHTT----SSCEEEECCCSSHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHcCC-CEEEECccccChhhC----CHHHHHHHHHHHHHHhCC----CCcEEEeCCCcCHHHHHHHHHHHHHcCCCE
Confidence 45678999 999862 11111111 122333333333333332 26888887777644444432 2344443
Q ss_pred eecccccccccCCCceeecCcchhHHHHHhcCC-Ccchh-hhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCC
Q psy9039 119 IRAESFVFGHMADEGLMNAQAGPLLRYRKQIGA-DNVLV-FTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNA 196 (251)
Q Consensus 119 ir~~~~~~~~~~~~Gli~~da~e~~~~r~~l~~-~~i~i-~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~ 196 (251)
+-.- ..-...+..+++.++.+.+-. -++.+ ++++-...+.. .+.+.+.+.++.-.+- |-+
T Consensus 122 vlv~--------~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~-----l~~~~~~~La~~pnIv-----giK 183 (314)
T 3qze_A 122 CLLV--------TPYYNKPTQEGMYQHFRHIAEAVAIPQILYNVPGRTSCD-----MLPETVERLSKVPNII-----GIK 183 (314)
T ss_dssp EEEE--------CCCSSCCCHHHHHHHHHHHHHHSCSCEEEEECHHHHSCC-----CCHHHHHHHHTSTTEE-----EEE
T ss_pred EEEc--------CCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCC-----CCHHHHHHHhcCCCEE-----EEE
Confidence 3220 111112234455555444311 12222 33332233433 2334444444321221 222
Q ss_pred CCCCCCHHHHHHHHhcC--CCCEEEecCCChHhHHHhhc-CCEEEEece
Q psy9039 197 TGDPADVSQLMSVKNAV--DLPILIGSGVTSDNVEHYMT-ADALIIGSH 242 (251)
Q Consensus 197 ~g~~~~~~~l~~vr~~~--~~PV~vG~GI~~~~v~~~~~-ADGvIVGS~ 242 (251)
. ...+...+.++++.. +.-|+.|. ..--...+.. ++|+|-+++
T Consensus 184 d-ssgd~~~~~~~~~~~~~~f~v~~G~--d~~~l~~l~~Ga~G~is~~a 229 (314)
T 3qze_A 184 E-ATGDLQRAKEVIERVGKDFLVYSGD--DATAVELMLLGGKGNISVTA 229 (314)
T ss_dssp E-CSCCHHHHHHHHHHSCTTSEEEESC--GGGHHHHHHTTCCEEEESGG
T ss_pred c-CCCCHHHHHHHHHHcCCCeEEEecC--hHHHHHHHHCCCCEEEecHH
Confidence 1 122566677766655 35555444 2222334444 999998865
No 290
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=80.85 E-value=1.9 Score=40.65 Aligned_cols=62 Identities=19% Similarity=0.143 Sum_probs=45.3
Q ss_pred HHHhhhccccEEEecCCCCCCCC-CHHHHHHHHhcC-C-CCEEEecCCChHhHHHhhc--CCEEEEec
Q psy9039 179 AKAASFFLSDGLIITGNATGDPA-DVSQLMSVKNAV-D-LPILIGSGVTSDNVEHYMT--ADALIIGS 241 (251)
Q Consensus 179 a~~a~~~~~D~v~VTG~~~g~~~-~~~~l~~vr~~~-~-~PV~vG~GI~~~~v~~~~~--ADGvIVGS 241 (251)
++.....+++.+.+.-.+ +... ..+.++.+|+.. + +||++|...+.+.+..+.+ ||+++||.
T Consensus 247 ~~~l~e~gv~~l~Vd~~~-g~~~~~~~~i~~lk~~~~~~~~Vi~G~V~t~~~a~~l~~aGad~I~Vg~ 313 (503)
T 1me8_A 247 VPALVEAGADVLCIDSSD-GFSEWQKITIGWIREKYGDKVKVGAGNIVDGEGFRYLADAGADFIKIGI 313 (503)
T ss_dssp HHHHHHHTCSEEEECCSC-CCSHHHHHHHHHHHHHHGGGSCEEEEEECSHHHHHHHHHHTCSEEEECS
T ss_pred HHHHHhhhccceEEeccc-CcccchhhHHHHHHHhCCCCceEeeccccCHHHHHHHHHhCCCeEEecc
Confidence 444444589998885443 2222 246788888876 5 8999988889999998886 99999974
No 291
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=80.83 E-value=3.8 Score=38.77 Aligned_cols=39 Identities=15% Similarity=0.308 Sum_probs=32.4
Q ss_pred HHHHHHHHhcCCCCEEEecCCChHhHHHhhc--CCEEEEec
Q psy9039 203 VSQLMSVKNAVDLPILIGSGVTSDNVEHYMT--ADALIIGS 241 (251)
Q Consensus 203 ~~~l~~vr~~~~~PV~vG~GI~~~~v~~~~~--ADGvIVGS 241 (251)
++.++++|+.+++||++-+..+.+.+..+.+ +|+++|+.
T Consensus 332 ~~~i~~lr~~~~~PvivKgv~~~e~A~~a~~aGad~I~vs~ 372 (511)
T 1kbi_A 332 WKDIEELKKKTKLPIVIKGVQRTEDVIKAAEIGVSGVVLSN 372 (511)
T ss_dssp HHHHHHHHHHCSSCEEEEEECSHHHHHHHHHTTCSEEEECC
T ss_pred HHHHHHHHHHhCCcEEEEeCCCHHHHHHHHHcCCCEEEEcC
Confidence 6779999999999999985447888877775 99999954
No 292
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=80.71 E-value=2.3 Score=37.91 Aligned_cols=91 Identities=9% Similarity=0.096 Sum_probs=56.9
Q ss_pred cchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCCCCCCCCHHHHHHHHhcCCCCEE
Q psy9039 139 AGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNATGDPADVSQLMSVKNAVDLPIL 218 (251)
Q Consensus 139 a~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~g~~~~~~~l~~vr~~~~~PV~ 218 (251)
.+-+...|+.+|. ++.+.-|.+ .+ + +.....+.++..+.++++.+- ..-.+.+.+.++++|+.+++||+
T Consensus 176 ~e~v~avr~a~g~-~~~l~vDan--~~--~--~~~~a~~~~~~l~~~~i~~iE----~P~~~~~~~~~~~l~~~~~iPI~ 244 (359)
T 1mdl_A 176 LAVVRSIRQAVGD-DFGIMVDYN--QS--L--DVPAAIKRSQALQQEGVTWIE----EPTLQHDYEGHQRIQSKLNVPVQ 244 (359)
T ss_dssp HHHHHHHHHHHCS-SSEEEEECT--TC--S--CHHHHHHHHHHHHHHTCSCEE----CCSCTTCHHHHHHHHHTCSSCEE
T ss_pred HHHHHHHHHHhCC-CCEEEEECC--CC--C--CHHHHHHHHHHHHHhCCCeEE----CCCChhhHHHHHHHHHhCCCCEE
Confidence 3444556777764 566654443 11 1 112223344444446777651 11112357889999999999999
Q ss_pred EecCC-ChHhHHHhhc---CCEEEEe
Q psy9039 219 IGSGV-TSDNVEHYMT---ADALIIG 240 (251)
Q Consensus 219 vG~GI-~~~~v~~~~~---ADGvIVG 240 (251)
.+..+ +++.+.+++. +|.+.+.
T Consensus 245 ~de~~~~~~~~~~~i~~~~~d~v~ik 270 (359)
T 1mdl_A 245 MGENWLGPEEMFKALSIGACRLAMPD 270 (359)
T ss_dssp ECTTCCSHHHHHHHHHTTCCSEECCB
T ss_pred eCCCCCCHHHHHHHHHcCCCCEEeec
Confidence 99999 7899998874 8988764
No 293
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=80.64 E-value=4.7 Score=35.31 Aligned_cols=58 Identities=24% Similarity=0.398 Sum_probs=37.1
Q ss_pred hccccEEEecCCCCCCCCC--H----HHHHHHHhcC--CCCEEEecCC-Ch-HhHH---Hhhc--CCEEEEece
Q psy9039 184 FFLSDGLIITGNATGDPAD--V----SQLMSVKNAV--DLPILIGSGV-TS-DNVE---HYMT--ADALIIGSH 242 (251)
Q Consensus 184 ~~~~D~v~VTG~~~g~~~~--~----~~l~~vr~~~--~~PV~vG~GI-~~-~~v~---~~~~--ADGvIVGS~ 242 (251)
..|+|++++-|+. |+... . +.++.+++.+ .+||++|-|- +. +.++ .+.+ |||+.+-+-
T Consensus 48 ~~Gv~gl~v~Gtt-GE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~st~~ai~la~~A~~~Gadavlv~~P 120 (304)
T 3cpr_A 48 DKGLDSLVLAGTT-GESPTTTAAEKLELLKAVREEVGDRAKLIAGVGTNNTRTSVELAEAAASAGADGLLVVTP 120 (304)
T ss_dssp HTTCCEEEESSTT-TTTTTSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HcCCCEEEECccc-cChhhCCHHHHHHHHHHHHHHhCCCCcEEecCCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 3599999998874 44332 2 3345555554 5999999998 54 3333 2222 999988653
No 294
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=80.51 E-value=4 Score=35.75 Aligned_cols=58 Identities=16% Similarity=0.365 Sum_probs=37.1
Q ss_pred hccccEEEecCCCCCCCC--CH----HHHHHHHhcC--CCCEEEecCC-Ch-HhHH---Hhhc--CCEEEEece
Q psy9039 184 FFLSDGLIITGNATGDPA--DV----SQLMSVKNAV--DLPILIGSGV-TS-DNVE---HYMT--ADALIIGSH 242 (251)
Q Consensus 184 ~~~~D~v~VTG~~~g~~~--~~----~~l~~vr~~~--~~PV~vG~GI-~~-~~v~---~~~~--ADGvIVGS~ 242 (251)
..|+|++++.|+. |+.. +. +.++.+++.+ ++||++|-|- +. +.++ .+.+ |||+.+-+-
T Consensus 44 ~~Gv~gl~v~GtT-GE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 116 (301)
T 1xky_A 44 DNGTTAIVVGGTT-GESPTLTSEEKVALYRHVVSVVDKRVPVIAGTGSNNTHASIDLTKKATEVGVDAVMLVAP 116 (301)
T ss_dssp HTTCCEEEESSTT-TTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HcCCCEEEECccc-cChhhCCHHHHHHHHHHHHHHhCCCceEEeCCCCCCHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 3699999998874 4432 22 3345555554 6999999998 54 3333 2222 999988653
No 295
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=80.21 E-value=2.6 Score=37.82 Aligned_cols=91 Identities=12% Similarity=0.047 Sum_probs=57.2
Q ss_pred cchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCCCCCCCCHHHHHHHHhcCCCCEE
Q psy9039 139 AGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNATGDPADVSQLMSVKNAVDLPIL 218 (251)
Q Consensus 139 a~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~g~~~~~~~l~~vr~~~~~PV~ 218 (251)
.+-+...|+.+|. ++.+.-|.+ .+ + +.....+.++..+.++++.+- ..-.+.+.+.++++|+.+++||+
T Consensus 178 ~e~v~avr~a~G~-d~~l~vDan--~~--~--~~~~a~~~~~~l~~~~i~~iE----qP~~~~d~~~~~~l~~~~~iPI~ 246 (371)
T 2ovl_A 178 VDRVSALREHLGD-SFPLMVDAN--MK--W--TVDGAIRAARALAPFDLHWIE----EPTIPDDLVGNARIVRESGHTIA 246 (371)
T ss_dssp HHHHHHHHHHHCT-TSCEEEECT--TC--S--CHHHHHHHHHHHGGGCCSEEE----CCSCTTCHHHHHHHHHHHCSCEE
T ss_pred HHHHHHHHHHhCC-CCeEEEECC--CC--C--CHHHHHHHHHHHHhcCCCEEE----CCCCcccHHHHHHHHhhCCCCEE
Confidence 3445556777764 555554443 11 1 112233344444447788752 11112357889999999999999
Q ss_pred EecCC-ChHhHHHhhc---CCEEEEe
Q psy9039 219 IGSGV-TSDNVEHYMT---ADALIIG 240 (251)
Q Consensus 219 vG~GI-~~~~v~~~~~---ADGvIVG 240 (251)
.+..+ +++++.++++ +|.+.+.
T Consensus 247 ~dE~~~~~~~~~~~i~~~~~d~v~ik 272 (371)
T 2ovl_A 247 GGENLHTLYDFHNAVRAGSLTLPEPD 272 (371)
T ss_dssp ECTTCCSHHHHHHHHHHTCCSEECCC
T ss_pred eCCCCCCHHHHHHHHHcCCCCEEeeC
Confidence 99999 7899998874 8988764
No 296
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=80.13 E-value=2.8 Score=37.88 Aligned_cols=88 Identities=16% Similarity=0.126 Sum_probs=55.5
Q ss_pred hHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCCCCCCCCHHHHHHHHhcCCCCEEEec
Q psy9039 142 LLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNATGDPADVSQLMSVKNAVDLPILIGS 221 (251)
Q Consensus 142 ~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~g~~~~~~~l~~vr~~~~~PV~vG~ 221 (251)
+...|+.+|. ++.+.-|.+ .+ + +.....+.++..+.++++.+- ..-.+.+.+.++++|+.+++||+.+.
T Consensus 198 v~avr~a~g~-d~~l~vDan--~~--~--~~~~a~~~~~~l~~~~i~~iE----qP~~~~d~~~~~~l~~~~~iPI~~dE 266 (388)
T 2nql_A 198 IANLRQVLGP-QAKIAADMH--WN--Q--TPERALELIAEMQPFDPWFAE----APVWTEDIAGLEKVSKNTDVPIAVGE 266 (388)
T ss_dssp HHHHHHHHCT-TSEEEEECC--SC--S--CHHHHHHHHHHHGGGCCSCEE----CCSCTTCHHHHHHHHTSCCSCEEECT
T ss_pred HHHHHHHhCC-CCEEEEECC--CC--C--CHHHHHHHHHHHhhcCCCEEE----CCCChhhHHHHHHHHhhCCCCEEEeC
Confidence 4445666764 555554432 11 1 112223344444446777752 11112357889999999999999999
Q ss_pred CC-ChHhHHHhhc---CCEEEEe
Q psy9039 222 GV-TSDNVEHYMT---ADALIIG 240 (251)
Q Consensus 222 GI-~~~~v~~~~~---ADGvIVG 240 (251)
.+ +++++.++++ +|.+.+-
T Consensus 267 ~~~~~~~~~~~i~~~~~d~v~ik 289 (388)
T 2nql_A 267 EWRTHWDMRARIERCRIAIVQPE 289 (388)
T ss_dssp TCCSHHHHHHHHTTSCCSEECCC
T ss_pred CcCCHHHHHHHHHcCCCCEEEec
Confidence 99 6899999884 9998764
No 297
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=80.12 E-value=3.8 Score=35.98 Aligned_cols=57 Identities=23% Similarity=0.406 Sum_probs=36.9
Q ss_pred hccccEEEecCCCCCCCC--CH----HHHHHHHhcC--CCCEEEecCC-ChHh-HH---Hhhc--CCEEEEec
Q psy9039 184 FFLSDGLIITGNATGDPA--DV----SQLMSVKNAV--DLPILIGSGV-TSDN-VE---HYMT--ADALIIGS 241 (251)
Q Consensus 184 ~~~~D~v~VTG~~~g~~~--~~----~~l~~vr~~~--~~PV~vG~GI-~~~~-v~---~~~~--ADGvIVGS 241 (251)
..|+|++++.|+. |+.. +. +.++.+++.+ ++||++|-|- +.++ ++ .+.+ |||+.+-+
T Consensus 47 ~~Gv~gi~v~Gtt-GE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~ 118 (304)
T 3l21_A 47 DQGCDGLVVSGTT-GESPTTTDGEKIELLRAVLEAVGDRARVIAGAGTYDTAHSIRLAKACAAEGAHGLLVVT 118 (304)
T ss_dssp HTTCSEEEESSTT-TTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred HcCCCEEEeCccc-cchhhCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECC
Confidence 3699999998874 4432 22 3355555554 6899999986 5433 33 2223 99998875
No 298
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=80.05 E-value=1.7 Score=38.65 Aligned_cols=99 Identities=16% Similarity=0.116 Sum_probs=56.0
Q ss_pred HHHHHhhCCCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeCChHHHHHHHHHc
Q psy9039 35 CAEIRKVLPPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQILSGCNKAALATAQAA 114 (251)
Q Consensus 35 ~~~a~~~a~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~~~~~~ia~a~ 114 (251)
.+.+++.++.+++.|+ |.|-|-=+--.|.+.++ +..+=.+-+..+++++++.++ +|+.|.++.. ..+..|...
T Consensus 32 ~~~a~~~a~~~v~~GA-dIIDIGgeSTrPGa~~v-~~~eE~~Rv~pvI~~l~~~~~--vpiSIDT~~~---~Va~aAl~a 104 (314)
T 2vef_A 32 LEQALQQARKLIAEGA-SMLDIGGESTRPGSSYV-EIEEEIQRVVPVIKAIRKESD--VLISIDTWKS---QVAEAALAA 104 (314)
T ss_dssp HHHHHHHHHHHHHTTC-SEEEEECCC-----CHH-HHHHHHHHHHHHHHHHHHHCC--CEEEEECSCH---HHHHHHHHT
T ss_pred HHHHHHHHHHHHHCCC-CEEEECCCcCCCCCCCC-CHHHHHHHHHHHHHHHHhhCC--ceEEEeCCCH---HHHHHHHHc
Confidence 3455566677888999 99986222222443332 111222333446788888777 7999999863 334455556
Q ss_pred CccceecccccccccCCCceeecCcchhHHHHHhcCC
Q psy9039 115 GLDFIRAESFVFGHMADEGLMNAQAGPLLRYRKQIGA 151 (251)
Q Consensus 115 g~~Fir~~~~~~~~~~~~Gli~~da~e~~~~r~~l~~ 151 (251)
|++.+-. ..|.- .| .+..+..+++++
T Consensus 105 Ga~iIND---------Vsg~~-~d-~~m~~v~a~~~~ 130 (314)
T 2vef_A 105 GADLVND---------ITGLM-GD-EKMPHVVAEARA 130 (314)
T ss_dssp TCCEEEE---------TTTTC-SC-TTHHHHHHHHTC
T ss_pred CCCEEEE---------CCCCC-CC-hHHHHHHHHcCC
Confidence 8888764 11111 11 356667777776
No 299
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=79.99 E-value=4.3 Score=35.39 Aligned_cols=57 Identities=23% Similarity=0.377 Sum_probs=36.7
Q ss_pred hccccEEEecCCCCCCCC--CH----HHHHHHHhcC--CCCEEEecCC-ChHh-HH---Hhhc--CCEEEEec
Q psy9039 184 FFLSDGLIITGNATGDPA--DV----SQLMSVKNAV--DLPILIGSGV-TSDN-VE---HYMT--ADALIIGS 241 (251)
Q Consensus 184 ~~~~D~v~VTG~~~g~~~--~~----~~l~~vr~~~--~~PV~vG~GI-~~~~-v~---~~~~--ADGvIVGS 241 (251)
..|+|++++.|+. |+.. +. +.++.+++.+ ++||++|-|- +.++ ++ .+.+ |||+.+-+
T Consensus 39 ~~Gv~gl~~~Gtt-GE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~ 110 (297)
T 3flu_A 39 ENGTDGIVAVGTT-GESATLSVEEHTAVIEAVVKHVAKRVPVIAGTGANNTVEAIALSQAAEKAGADYTLSVV 110 (297)
T ss_dssp HTTCCEEEESSTT-TTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred HcCCCEEEeCccc-cCcccCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEECC
Confidence 3699999998874 5432 22 3345555554 6999999997 5433 33 2223 99998875
No 300
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=79.83 E-value=12 Score=33.24 Aligned_cols=171 Identities=11% Similarity=-0.009 Sum_probs=76.5
Q ss_pred CCCcCCCCccEEEEeecCC-CCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeCChHHHHHHH---HHcCccc
Q psy9039 43 PPSVPVGVQHGVIVENMHD-VPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQILSGCNKAALATA---QAAGLDF 118 (251)
Q Consensus 43 ~~l~~~Gv~D~i~ieN~~~-~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~~~~~~ia---~a~g~~F 118 (251)
+-|++.|+ |||.+-=-.| .|.- .-.+..+-+..+++.+. ..+|+.+-+-.|....+...+ ...|++.
T Consensus 62 ~~li~~Gv-~Gl~v~GtTGE~~~L----s~eEr~~vi~~~ve~~~----grvpViaGvg~~st~eai~la~~A~~~Gada 132 (332)
T 2r8w_A 62 ARLDAAEV-DSVGILGSTGIYMYL----TREERRRAIEAAATILR----GRRTLMAGIGALRTDEAVALAKDAEAAGADA 132 (332)
T ss_dssp HHHHHHTC-SEEEESSTTTTGGGS----CHHHHHHHHHHHHHHHT----TSSEEEEEECCSSHHHHHHHHHHHHHHTCSE
T ss_pred HHHHHcCC-CEEEECccccChhhC----CHHHHHHHHHHHHHHhC----CCCcEEEecCCCCHHHHHHHHHHHHhcCCCE
Confidence 55677899 9998621111 2211 12233333333333332 226888887777644443332 3344444
Q ss_pred eecccccccccCCCceeecCcchhHHHHHhcCC-Ccchh-hhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCC
Q psy9039 119 IRAESFVFGHMADEGLMNAQAGPLLRYRKQIGA-DNVLV-FTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNA 196 (251)
Q Consensus 119 ir~~~~~~~~~~~~Gli~~da~e~~~~r~~l~~-~~i~i-~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~ 196 (251)
+-.- ..-...+..+++.++.+.+-. -++.+ ++++-...|.. .+.+.+.+.++.-. |.|-+
T Consensus 133 vlv~--------~P~Y~~~s~~~l~~~f~~VA~a~~lPiilYn~P~~tg~~-----l~~e~~~~La~~pn-----IvgiK 194 (332)
T 2r8w_A 133 LLLA--------PVSYTPLTQEEAYHHFAAVAGATALPLAIYNNPTTTRFT-----FSDELLVRLAYIPN-----IRAIK 194 (332)
T ss_dssp EEEC--------CCCSSCCCHHHHHHHHHHHHHHCSSCEEEECCHHHHCCC-----CCHHHHHHHHTSTT-----EEEEE
T ss_pred EEEC--------CCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCcC-----CCHHHHHHHHcCCC-----EEEEE
Confidence 3321 111112334555555444321 12222 33333333433 23333444443211 22222
Q ss_pred CCCCCC----HHHHHHHHhcCCCCEEEecCCChHhHHHhh-c-CCEEEEece
Q psy9039 197 TGDPAD----VSQLMSVKNAVDLPILIGSGVTSDNVEHYM-T-ADALIIGSH 242 (251)
Q Consensus 197 ~g~~~~----~~~l~~vr~~~~~PV~vG~GI~~~~v~~~~-~-ADGvIVGS~ 242 (251)
.. ..+ ...+.++++.++-.+.+-+|- .+.+...+ . +||+|-|++
T Consensus 195 ds-sgd~~~~~~~~~~l~~~~~~~f~v~~G~-D~~~l~~l~~G~~G~is~~a 244 (332)
T 2r8w_A 195 MP-LPADADYAGELARLRPKLSDDFAIGYSG-DWGCTDATLAGGDTWYSVVA 244 (332)
T ss_dssp EC-CCTTCCHHHHHHHHTTTSCTTCEEEECC-HHHHHHHHHTTCSEEEESGG
T ss_pred eC-CCCchhHHHHHHHHHHhcCCCEEEEeCc-hHHHHHHHHCCCCEEEeCHH
Confidence 11 123 677778877653233344443 33444444 4 999998865
No 301
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=79.64 E-value=3.8 Score=35.98 Aligned_cols=57 Identities=26% Similarity=0.447 Sum_probs=37.0
Q ss_pred hccccEEEecCCCCCCCC--CH----HHHHHHHhcC--CCCEEEecCC-Ch-HhHH---Hhhc--CCEEEEec
Q psy9039 184 FFLSDGLIITGNATGDPA--DV----SQLMSVKNAV--DLPILIGSGV-TS-DNVE---HYMT--ADALIIGS 241 (251)
Q Consensus 184 ~~~~D~v~VTG~~~g~~~--~~----~~l~~vr~~~--~~PV~vG~GI-~~-~~v~---~~~~--ADGvIVGS 241 (251)
..|+|++++.|+. |+.. +. +.++.+++.+ .+||++|-|- +. +.++ .+.+ ||++.+-+
T Consensus 46 ~~Gv~Gl~v~GtT-GE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~ 117 (307)
T 3s5o_A 46 TFPFRGFVVQGSN-GEFPFLTSSERLEVVSRVRQAMPKNRLLLAGSGCESTQATVEMTVSMAQVGADAAMVVT 117 (307)
T ss_dssp TSCCSEEEESSGG-GTGGGSCHHHHHHHHHHHHHTSCTTSEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred HcCCCEEEECccc-cchhhCCHHHHHHHHHHHHHHcCCCCcEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcC
Confidence 3689999998874 4422 11 3455666665 6999999997 54 3333 2223 99998864
No 302
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=79.54 E-value=3.5 Score=35.88 Aligned_cols=57 Identities=19% Similarity=0.421 Sum_probs=36.7
Q ss_pred hccccEEEecCCCCCCCC--CH----HHHHHHHhcC--CCCEEEecCC-ChHh-HH---Hhhc--CCEEEEec
Q psy9039 184 FFLSDGLIITGNATGDPA--DV----SQLMSVKNAV--DLPILIGSGV-TSDN-VE---HYMT--ADALIIGS 241 (251)
Q Consensus 184 ~~~~D~v~VTG~~~g~~~--~~----~~l~~vr~~~--~~PV~vG~GI-~~~~-v~---~~~~--ADGvIVGS 241 (251)
..|+|++++.|+. |+.. +. +.++.+++.+ ++||++|-|- +.++ ++ .+.+ |||+.+-+
T Consensus 34 ~~Gv~gl~v~Gtt-GE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~ 105 (292)
T 3daq_A 34 ENNAQAIIVNGTT-AESPTLTTDEKELILKTVIDLVDKRVPVIAGTGTNDTEKSIQASIQAKALGADAIMLIT 105 (292)
T ss_dssp HTTCCEEEESSGG-GTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred HcCCCEEEECccc-cccccCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHHcCCCEEEECC
Confidence 3699999998874 4432 12 3355555554 6999999987 5433 33 2223 99998875
No 303
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=79.51 E-value=17 Score=31.40 Aligned_cols=148 Identities=13% Similarity=0.082 Sum_probs=75.0
Q ss_pred CcCCCCccEEEEe-----ecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCcc-EEEEEee----CChHHHHHHHHHc
Q psy9039 45 SVPVGVQHGVIVE-----NMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVP-VGVQILS----GCNKAALATAQAA 114 (251)
Q Consensus 45 l~~~Gv~D~i~ie-----N~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P-~Gvn~~~----N~~~~~~~ia~a~ 114 (251)
+.++|+ |+|.+- ..+|.| + -+|++..-|..-.+.+++.++ .| +.+.+=+ |+ ..++.-+
T Consensus 33 ~e~aG~-d~ilvGdsl~~~~lG~~--d---t~~vtldemi~h~~aV~r~~~--~~~vvaD~pfgsy~~~-~~a~~~a--- 100 (264)
T 1m3u_A 33 FADEGL-NVMLVGDSLGMTVQGHD--S---TLPVTVADIAYHTAAVRRGAP--NCLLLADLPFMAYATP-EQAFENA--- 100 (264)
T ss_dssp HHHHTC-CEEEECTTHHHHTTCCS--S---STTCCHHHHHHHHHHHHHHCT--TSEEEEECCTTSSSSH-HHHHHHH---
T ss_pred HHHcCC-CEEEECHHHHHHHcCCC--C---CCCcCHHHHHHHHHHHHhhCC--CCcEEEECCCCCcCCH-HHHHHHH---
Confidence 467899 999874 223332 2 367888889888999998877 44 3443222 21 2122111
Q ss_pred CccceecccccccccCCCceeecCcchhHHHHHhcCCCcchhhhh--hHhhc-----cCCCCC-CcccHHHHHHHhh---
Q psy9039 115 GLDFIRAESFVFGHMADEGLMNAQAGPLLRYRKQIGADNVLVFTD--IKKKH-----SSHAIT-ADVDITETAKAAS--- 183 (251)
Q Consensus 115 g~~Fir~~~~~~~~~~~~Gli~~da~e~~~~r~~l~~~~i~i~a~--v~~k~-----~~~~~~-~~~~i~~~a~~a~--- 183 (251)
.++++ .|.+++-..+..+....-+.+-...|.+++- +.|+. +.-... ++.+.+++.+.|.
T Consensus 101 -~rl~k--------aGa~aVklEgg~e~~~~I~al~~agipV~gHiGLtPq~v~~~ggf~v~grt~~~a~~~i~rA~a~~ 171 (264)
T 1m3u_A 101 -ATVMR--------AGANMVKIEGGEWLVETVQMLTERAVPVCGHLGLTPQSVNIFGGYKVQGRGDEAGDQLLSDALALE 171 (264)
T ss_dssp -HHHHH--------TTCSEEECCCSGGGHHHHHHHHHTTCCEEEEEESCGGGHHHHTSSCCCCCSHHHHHHHHHHHHHHH
T ss_pred -HHHHH--------cCCCEEEECCcHHHHHHHHHHHHCCCCeEeeecCCceeecccCCeEEEeCCHHHHHHHHHHHHHHH
Confidence 13333 2233333333223322222221124444321 11111 111111 1223344555554
Q ss_pred hccccEEEecCCCCCCCCCHHHHHHHHhcCCCCEEE
Q psy9039 184 FFLSDGLIITGNATGDPADVSQLMSVKNAVDLPILI 219 (251)
Q Consensus 184 ~~~~D~v~VTG~~~g~~~~~~~l~~vr~~~~~PV~v 219 (251)
..|||++.+-+.. .++.+++.+.+++|++-
T Consensus 172 eAGA~~ivlE~vp------~~~a~~it~~l~iP~ig 201 (264)
T 1m3u_A 172 AAGAQLLVLECVP------VELAKRITEALAIPVIG 201 (264)
T ss_dssp HHTCCEEEEESCC------HHHHHHHHHHCSSCEEE
T ss_pred HCCCcEEEEecCC------HHHHHHHHHhCCCCEEE
Confidence 2699999997642 35677888889999874
No 304
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=79.49 E-value=5.5 Score=38.16 Aligned_cols=93 Identities=13% Similarity=0.044 Sum_probs=54.8
Q ss_pred HHHHhhCCCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeCChHHHHHHHHHcC
Q psy9039 36 AEIRKVLPPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQILSGCNKAALATAQAAG 115 (251)
Q Consensus 36 ~~a~~~a~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~~~~~~ia~a~g 115 (251)
+.+++.++.+++.|+ |.|-|- |-..++ ...+.|.|++..+++.++ +|+.+..+... +...++....|
T Consensus 340 ~~a~~~A~~~v~~GA-diIDIg-----pg~~~v----~~~ee~~rvv~~i~~~~~--vpisIDT~~~~-v~eaal~~~~G 406 (566)
T 1q7z_A 340 EIVIKEAKTQVEKGA-EVLDVN-----FGIESQ----IDVRYVEKIVQTLPYVSN--VPLSLDIQNVD-LTERALRAYPG 406 (566)
T ss_dssp HHHHHHHHHHHHTTC-SEEEEE-----CSSGGG----SCHHHHHHHHHHHHHHTC--SCEEEECCCHH-HHHHHHHHCSS
T ss_pred HHHHHHHHHHHHCCC-CEEEEC-----CCCCCC----CHHHHHHHHHHHHHhhCC--ceEEEeCCCHH-HHHHHHHhcCC
Confidence 445555566778999 999872 332222 234568888888888777 89999988532 44444432237
Q ss_pred ccceecccccccccCCCceeecCcchhHHHHHhcCC
Q psy9039 116 LDFIRAESFVFGHMADEGLMNAQAGPLLRYRKQIGA 151 (251)
Q Consensus 116 ~~Fir~~~~~~~~~~~~Gli~~da~e~~~~r~~l~~ 151 (251)
++.+-. ..|.- .+..+..+..+++++
T Consensus 407 ~~iINd---------is~~~-~~~~~~~~~~~~~g~ 432 (566)
T 1q7z_A 407 RSLFNS---------AKVDE-EELEMKINLLKKYGG 432 (566)
T ss_dssp CCEEEE---------EESCH-HHHHHHHHHHHHHCC
T ss_pred CCEEEE---------CCcch-hhHHHHHHHHHHhCC
Confidence 666553 00100 001455667777776
No 305
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=79.28 E-value=5.5 Score=32.55 Aligned_cols=64 Identities=22% Similarity=0.326 Sum_probs=46.3
Q ss_pred ccHHHHHHHhhhccccEEEecCCCCCCCCCHHHHHHHHhcCCCCEEE-------ecCC--C--hHhHHHhhc--CCEEEE
Q psy9039 173 VDITETAKAASFFLSDGLIITGNATGDPADVSQLMSVKNAVDLPILI-------GSGV--T--SDNVEHYMT--ADALII 239 (251)
Q Consensus 173 ~~i~~~a~~a~~~~~D~v~VTG~~~g~~~~~~~l~~vr~~~~~PV~v-------G~GI--~--~~~v~~~~~--ADGvIV 239 (251)
....++++.+...|++++-+. ..+.++++|+.+++|++. ++++ + .+++..++. ||.+.+
T Consensus 23 ~~~~~~a~~~~~~Ga~~i~~~--------~~~~i~~i~~~~~~pv~~~~~~~~~~~~~~i~~~~~~i~~~~~~Gad~v~l 94 (223)
T 1y0e_A 23 FIMSKMALAAYEGGAVGIRAN--------TKEDILAIKETVDLPVIGIVKRDYDHSDVFITATSKEVDELIESQCEVIAL 94 (223)
T ss_dssp HHHHHHHHHHHHHTCSEEEEE--------SHHHHHHHHHHCCSCEEEECBCCCTTCCCCBSCSHHHHHHHHHHTCSEEEE
T ss_pred ccHHHHHHHHHHCCCeeeccC--------CHHHHHHHHHhcCCCEEeeeccCCCccccccCCcHHHHHHHHhCCCCEEEE
Confidence 456667766666788887553 357799999999999952 4444 2 467877775 999999
Q ss_pred eceEe
Q psy9039 240 GSHFK 244 (251)
Q Consensus 240 GS~~~ 244 (251)
++...
T Consensus 95 ~~~~~ 99 (223)
T 1y0e_A 95 DATLQ 99 (223)
T ss_dssp ECSCS
T ss_pred eeecc
Confidence 98654
No 306
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=79.26 E-value=4.5 Score=36.26 Aligned_cols=89 Identities=12% Similarity=0.137 Sum_probs=56.6
Q ss_pred chhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCCCCC-CCCHHHHHHHHhcCCCCEE
Q psy9039 140 GPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNATGD-PADVSQLMSVKNAVDLPIL 218 (251)
Q Consensus 140 ~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~g~-~~~~~~l~~vr~~~~~PV~ 218 (251)
+-+...|+.+|. ++.+.-|.+- + .+.....+.++..+.++++.+- ... +.+.+.++++|+.+++||+
T Consensus 188 e~v~avr~a~g~-d~~l~vDan~--~----~~~~~a~~~~~~l~~~~i~~iE-----~P~~~~~~~~~~~l~~~~~iPIa 255 (382)
T 1rvk_A 188 KACAAVREAVGP-DIRLMIDAFH--W----YSRTDALALGRGLEKLGFDWIE-----EPMDEQSLSSYKWLSDNLDIPVV 255 (382)
T ss_dssp HHHHHHHHHHCT-TSEEEEECCT--T----CCHHHHHHHHHHHHTTTCSEEE-----CCSCTTCHHHHHHHHHHCSSCEE
T ss_pred HHHHHHHHHhCC-CCeEEEECCC--C----CCHHHHHHHHHHHHhcCCCEEe-----CCCChhhHHHHHHHHhhCCCCEE
Confidence 344456777764 5666544431 1 1112223344444446777652 112 2357889999999999999
Q ss_pred EecCC-C-hHhHHHhhc---CCEEEEe
Q psy9039 219 IGSGV-T-SDNVEHYMT---ADALIIG 240 (251)
Q Consensus 219 vG~GI-~-~~~v~~~~~---ADGvIVG 240 (251)
.+..+ + +++++++++ +|.+.+-
T Consensus 256 ~dE~~~~~~~~~~~~i~~~~~d~v~ik 282 (382)
T 1rvk_A 256 GPESAAGKHWHRAEWIKAGACDILRTG 282 (382)
T ss_dssp ECSSCSSHHHHHHHHHHTTCCSEEEEC
T ss_pred EeCCccCcHHHHHHHHHcCCCCEEeeC
Confidence 99999 8 899998874 8998863
No 307
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=79.24 E-value=4.3 Score=35.28 Aligned_cols=58 Identities=12% Similarity=0.322 Sum_probs=37.0
Q ss_pred hccccEEEecCCCCCCCC--CH----HHHHHHHhcC--CCCEEEecCC-Ch-HhHH---Hhhc--CCEEEEece
Q psy9039 184 FFLSDGLIITGNATGDPA--DV----SQLMSVKNAV--DLPILIGSGV-TS-DNVE---HYMT--ADALIIGSH 242 (251)
Q Consensus 184 ~~~~D~v~VTG~~~g~~~--~~----~~l~~vr~~~--~~PV~vG~GI-~~-~~v~---~~~~--ADGvIVGS~ 242 (251)
..|+|++++.|+. |+.. +. +.++.+++.+ ++||++|-|- +. +.++ .+.+ |||+.+-+-
T Consensus 33 ~~Gv~gl~~~Gtt-GE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 105 (292)
T 2ojp_A 33 ASGTSAIVSVGTT-GESATLNHDEHADVVMMTLDLADGRIPVIAGTGANATAEAISLTQRFNDSGIVGCLTVTP 105 (292)
T ss_dssp HHTCCEEEESSTT-TTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHTTTSSCSEEEEECC
T ss_pred HcCCCEEEECccc-cchhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHhcCCCEEEECCC
Confidence 3599999998874 4432 22 3355555554 5999999998 54 3333 2223 999988653
No 308
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=79.21 E-value=4.1 Score=35.68 Aligned_cols=58 Identities=17% Similarity=0.240 Sum_probs=37.1
Q ss_pred hccccEEEecCCCCCCCC--CH----HHHHHHHhcC--CCCEEEecCC-Ch-HhHH---Hhhc--CCEEEEece
Q psy9039 184 FFLSDGLIITGNATGDPA--DV----SQLMSVKNAV--DLPILIGSGV-TS-DNVE---HYMT--ADALIIGSH 242 (251)
Q Consensus 184 ~~~~D~v~VTG~~~g~~~--~~----~~l~~vr~~~--~~PV~vG~GI-~~-~~v~---~~~~--ADGvIVGS~ 242 (251)
..|+|++++.|+. |+.. +. +.++.+++.+ ++||++|-|- +. +.++ .+.+ |||+.+-+-
T Consensus 43 ~~Gv~Gl~v~GtT-GE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 115 (303)
T 2wkj_A 43 QQGIDGLYVGGST-GEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVGCVSTAESQQLAASAKRYGFDAVSAVTP 115 (303)
T ss_dssp HTTCSEEEESSTT-TTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HcCCCEEEECeec-cChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhCCCCEEEecCC
Confidence 3699999998874 5432 22 3355555554 6999999998 44 3333 2223 999988653
No 309
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=79.20 E-value=3.8 Score=36.21 Aligned_cols=57 Identities=23% Similarity=0.382 Sum_probs=36.8
Q ss_pred hccccEEEecCCCCCCCCC--H----HHHHHHHhcC--CCCEEEecCC-ChHh-HH---Hhhc--CCEEEEec
Q psy9039 184 FFLSDGLIITGNATGDPAD--V----SQLMSVKNAV--DLPILIGSGV-TSDN-VE---HYMT--ADALIIGS 241 (251)
Q Consensus 184 ~~~~D~v~VTG~~~g~~~~--~----~~l~~vr~~~--~~PV~vG~GI-~~~~-v~---~~~~--ADGvIVGS 241 (251)
..|+|++++.|+. |+... . +.++.+++.+ ++||++|-|- +.++ ++ .+.+ |||+.+-+
T Consensus 54 ~~Gv~Gl~v~GtT-GE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~ 125 (315)
T 3si9_A 54 TQGINGVSPVGTT-GESPTLTHEEHKRIIELCVEQVAKRVPVVAGAGSNSTSEAVELAKHAEKAGADAVLVVT 125 (315)
T ss_dssp HTTCSEEECSSTT-TTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred HcCCCEEEeCccc-cCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECC
Confidence 3699999998874 54332 2 3355555554 6999999997 4433 33 2223 99998875
No 310
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=79.03 E-value=4.5 Score=35.22 Aligned_cols=58 Identities=19% Similarity=0.215 Sum_probs=37.5
Q ss_pred hccccEEEecCCCCCCCC--CH----HHHHHHHhcC--CCCEEEecCC-Ch-HhHH---Hhhc--CCEEEEece
Q psy9039 184 FFLSDGLIITGNATGDPA--DV----SQLMSVKNAV--DLPILIGSGV-TS-DNVE---HYMT--ADALIIGSH 242 (251)
Q Consensus 184 ~~~~D~v~VTG~~~g~~~--~~----~~l~~vr~~~--~~PV~vG~GI-~~-~~v~---~~~~--ADGvIVGS~ 242 (251)
..|+|++++.|+. |+.. +. +.++.+++.+ ++||++|-|- +. +.++ .+.+ |||+.+-+-
T Consensus 35 ~~Gv~gl~~~Gtt-GE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 107 (294)
T 3b4u_A 35 SNGCDSVTLFGTT-GEGCSVGSRERQAILSSFIAAGIAPSRIVTGVLVDSIEDAADQSAEALNAGARNILLAPP 107 (294)
T ss_dssp HTTCSEEEESSTT-TTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEECCSSHHHHHHHHHHHHHTTCSEEEECCC
T ss_pred HcCCCEEEECccc-cChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCccHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 3599999998874 4432 22 3455566665 5899999998 44 3333 2222 999988653
No 311
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=79.02 E-value=14 Score=32.29 Aligned_cols=170 Identities=14% Similarity=0.046 Sum_probs=76.7
Q ss_pred CCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeCChHHHHHHH---HHcCccce
Q psy9039 43 PPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQILSGCNKAALATA---QAAGLDFI 119 (251)
Q Consensus 43 ~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~~~~~~ia---~a~g~~Fi 119 (251)
+-|++.|+ |||.+-=-.|=-++. .-.+..+ +++.+.+.....+|+.+.+-.|....+...+ ...|++.+
T Consensus 43 ~~li~~Gv-~gi~v~GttGE~~~L---t~~Er~~----v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadav 114 (304)
T 3l21_A 43 NHLVDQGC-DGLVVSGTTGESPTT---TDGEKIE----LLRAVLEAVGDRARVIAGAGTYDTAHSIRLAKACAAEGAHGL 114 (304)
T ss_dssp HHHHHTTC-SEEEESSTTTTGGGS---CHHHHHH----HHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHHTCSEE
T ss_pred HHHHHcCC-CEEEeCccccchhhC---CHHHHHH----HHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEE
Confidence 55678999 999862111111111 1223333 3344433322226888887666644443332 22344433
Q ss_pred ecccccccccCCCceeecCcchhHHHHHhcC-CCcchh-hhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCCC
Q psy9039 120 RAESFVFGHMADEGLMNAQAGPLLRYRKQIG-ADNVLV-FTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNAT 197 (251)
Q Consensus 120 r~~~~~~~~~~~~Gli~~da~e~~~~r~~l~-~~~i~i-~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~ 197 (251)
-.- ..-...+..+++.++.+.+- .-++.+ ++++-...+.. .+.+.+.+.++.-.+- |-+.
T Consensus 115 lv~--------~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~-----l~~~~~~~La~~pnIv-----giKd 176 (304)
T 3l21_A 115 LVV--------TPYYSKPPQRGLQAHFTAVADATELPMLLYDIPGRSAVP-----IEPDTIRALASHPNIV-----GVXD 176 (304)
T ss_dssp EEE--------CCCSSCCCHHHHHHHHHHHHTSCSSCEEEEECHHHHSSC-----CCHHHHHHHHTSTTEE-----EEEE
T ss_pred EEC--------CCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCC-----CCHHHHHHHhcCCCEE-----EEEC
Confidence 321 11111223455666555542 223333 33333233443 2334444444321222 2221
Q ss_pred CCCCCHHHHHHHHhcCCCCEEEecCCChHhHHHhh-c-CCEEEEece
Q psy9039 198 GDPADVSQLMSVKNAVDLPILIGSGVTSDNVEHYM-T-ADALIIGSH 242 (251)
Q Consensus 198 g~~~~~~~l~~vr~~~~~PV~vG~GI~~~~v~~~~-~-ADGvIVGS~ 242 (251)
...+...+.+++...+..|+.|.. +.....+ . ++|+|-+++
T Consensus 177 -ssgd~~~~~~~~~~~~f~v~~G~d---~~~l~~l~~Ga~G~is~~~ 219 (304)
T 3l21_A 177 -AKADLHSGAQIMADTGLAYYSGDD---ALNLPWLRMGATGFISVIA 219 (304)
T ss_dssp -CSCCHHHHHHHHHHHCCEEEESSG---GGHHHHHHHTCCEEEESTH
T ss_pred -CCCCHHHHHHHhcCCCeEEEeCch---HHHHHHHHcCCCEEEecHH
Confidence 112466666655444677775542 3333334 4 999998764
No 312
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=78.92 E-value=7.8 Score=34.14 Aligned_cols=171 Identities=11% Similarity=0.086 Sum_probs=75.8
Q ss_pred CCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeCChHHHHHHH---HHcCccce
Q psy9039 43 PPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQILSGCNKAALATA---QAAGLDFI 119 (251)
Q Consensus 43 ~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~~~~~~ia---~a~g~~Fi 119 (251)
+-|++.|+ |+|.+ +|.-=.-+.-.-.+..+-+..+++.+.. .+|+.+.+-.|....+...+ ...|++.+
T Consensus 52 ~~li~~Gv-~Gi~v---~GtTGE~~~Ls~~Er~~v~~~~v~~~~g----rvpViaGvg~~~t~~ai~la~~A~~~Gadav 123 (315)
T 3na8_A 52 ERLIDGGV-HAIAP---LGSTGEGAYLSDPEWDEVVDFTLKTVAH----RVPTIVSVSDLTTAKTVRRAQFAESLGAEAV 123 (315)
T ss_dssp HHHHHTTC-SEEEC---SSGGGTGGGSCHHHHHHHHHHHHHHHTT----SSCBEEECCCSSHHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHcCC-CEEEE---CccccChhhCCHHHHHHHHHHHHHHhCC----CCcEEEecCCCCHHHHHHHHHHHHhcCCCEE
Confidence 55678999 99975 3320000000122333333333333332 25887777766644444432 33444433
Q ss_pred ecccccccccCCCceeecCcchhHHHHHhcCC-Ccchh-hhhhHhhccCCCCCCcccHHHHHHH-hhhccccEEEecCCC
Q psy9039 120 RAESFVFGHMADEGLMNAQAGPLLRYRKQIGA-DNVLV-FTDIKKKHSSHAITADVDITETAKA-ASFFLSDGLIITGNA 196 (251)
Q Consensus 120 r~~~~~~~~~~~~Gli~~da~e~~~~r~~l~~-~~i~i-~a~v~~k~~~~~~~~~~~i~~~a~~-a~~~~~D~v~VTG~~ 196 (251)
-.- ..-...+..+++.++.+.+-. -++.+ ++++-...+..+ +.+.+.+. ++.-.+- |-+
T Consensus 124 lv~--------~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l-----~~~~~~~L~a~~pnIv-----giK 185 (315)
T 3na8_A 124 MVL--------PISYWKLNEAEVFQHYRAVGEAIGVPVMLYNNPGTSGIDM-----SVELILRIVREVDNVT-----MVK 185 (315)
T ss_dssp EEC--------CCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCC-----CHHHHHHHHHHSTTEE-----EEE
T ss_pred EEC--------CCCCCCCCHHHHHHHHHHHHHhCCCcEEEEeCcchhCcCC-----CHHHHHHHHhcCCCEE-----EEE
Confidence 321 111112334555555544421 12222 333333334442 33333333 2221222 212
Q ss_pred CCCCCCHHHHHHHHhcC--CCCEEEecCCChHhHHHhhc-CCEEEEece
Q psy9039 197 TGDPADVSQLMSVKNAV--DLPILIGSGVTSDNVEHYMT-ADALIIGSH 242 (251)
Q Consensus 197 ~g~~~~~~~l~~vr~~~--~~PV~vG~GI~~~~v~~~~~-ADGvIVGS~ 242 (251)
. ...+...+.++++.+ +..|+.|.. .--...+.. ++|+|-|++
T Consensus 186 d-ssgd~~~~~~~~~~~~~~f~v~~G~D--~~~l~~l~~G~~G~is~~a 231 (315)
T 3na8_A 186 E-STGDIQRMHKLRLLGEGRVPFYNGCN--PLALEAFVAGAKGWCSAAP 231 (315)
T ss_dssp E-CSSCHHHHHHHHHHTTTCSCEEECCG--GGHHHHHHHTCSEEEESGG
T ss_pred C-CCCCHHHHHHHHHHcCCCEEEEeCch--HHHHHHHHCCCCEEEechh
Confidence 1 122466666666654 466665543 222333444 999998865
No 313
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=78.87 E-value=4.5 Score=35.24 Aligned_cols=58 Identities=16% Similarity=0.300 Sum_probs=37.1
Q ss_pred hccccEEEecCCCCCCCC--CH----HHHHHHHhcC--CCCEEEecCC-Ch-HhHH---Hhhc--CCEEEEece
Q psy9039 184 FFLSDGLIITGNATGDPA--DV----SQLMSVKNAV--DLPILIGSGV-TS-DNVE---HYMT--ADALIIGSH 242 (251)
Q Consensus 184 ~~~~D~v~VTG~~~g~~~--~~----~~l~~vr~~~--~~PV~vG~GI-~~-~~v~---~~~~--ADGvIVGS~ 242 (251)
..|+|++++.|+. |+.. +. +.++.+++.+ ++||++|-|- +. +.++ .+.+ |||+.+-+-
T Consensus 32 ~~Gv~gl~~~Gtt-GE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 104 (294)
T 2ehh_A 32 DNGTDAILVCGTT-GESPTLTFEEHEKVIEFAVKRAAGRIKVIAGTGGNATHEAVHLTAHAKEVGADGALVVVP 104 (294)
T ss_dssp TTTCCEEEESSTT-TTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HCCCCEEEECccc-cChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 3699999998874 4432 22 3345555544 5999999998 54 3333 2222 999988653
No 314
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=78.84 E-value=4.7 Score=35.01 Aligned_cols=58 Identities=17% Similarity=0.394 Sum_probs=37.1
Q ss_pred hccccEEEecCCCCCCCC--CH----HHHHHHHhcC--CCCEEEecCC-ChHh-HH---Hhhc--CCEEEEece
Q psy9039 184 FFLSDGLIITGNATGDPA--DV----SQLMSVKNAV--DLPILIGSGV-TSDN-VE---HYMT--ADALIIGSH 242 (251)
Q Consensus 184 ~~~~D~v~VTG~~~g~~~--~~----~~l~~vr~~~--~~PV~vG~GI-~~~~-v~---~~~~--ADGvIVGS~ 242 (251)
..|+|++++.|+. |+.. +. +.++.+++.+ .+||++|-|- +.++ ++ .+.+ ||++.+-+-
T Consensus 33 ~~Gv~gl~~~Gtt-GE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 105 (291)
T 3tak_A 33 EQGTNSIVAVGTT-GEASTLSMEEHTQVIKEIIRVANKRIPIIAGTGANSTREAIELTKAAKDLGADAALLVTP 105 (291)
T ss_dssp HHTCCEEEESSTT-TTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HCCCCEEEECccc-cccccCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 3599999998874 5432 22 3355555554 5999999997 5433 33 2223 999988753
No 315
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=78.67 E-value=2.6 Score=37.33 Aligned_cols=74 Identities=22% Similarity=0.174 Sum_probs=44.1
Q ss_pred CCCCcCCCCccEEEEeecCCCCcccc--------------CCCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeCChHHH
Q psy9039 42 LPPSVPVGVQHGVIVENMHDVPYVLE--------------AESGPEITANMTRLCAEIRKVLPPSVPVGVQILSGCNKAA 107 (251)
Q Consensus 42 a~~l~~~Gv~D~i~ieN~~~~Pf~~p--------------~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~~~~ 107 (251)
++.+++.|+ |+|.+.|.+|..|..+ ...|+-+ ...+.++++..++ +|+..+.=...+ ..
T Consensus 198 a~~~~~~G~-d~I~vs~~ggt~~~~~~~~r~~~~~~~~~~~~~g~~~----~~~l~~v~~~~~~-ipvia~GGI~~~-~d 270 (332)
T 1vcf_A 198 ALALRDLPL-AAVDVAGAGGTSWARVEEWVRFGEVRHPELCEIGIPT----ARAILEVREVLPH-LPLVASGGVYTG-TD 270 (332)
T ss_dssp HHHHTTSCC-SEEECCCBTSCCHHHHHHTC--------CCTTCSCBH----HHHHHHHHHHCSS-SCEEEESSCCSH-HH
T ss_pred HHHHHHcCC-CEEEeCCCCCCcchhHHHhhccccchhhhHhhccccH----HHHHHHHHHhcCC-CeEEEECCCCCH-HH
Confidence 456789999 9999999887422110 1124333 3445667777632 687776544442 33
Q ss_pred HHHHHHcCccceecc
Q psy9039 108 LATAQAAGLDFIRAE 122 (251)
Q Consensus 108 ~~ia~a~g~~Fir~~ 122 (251)
..-+.+.|++++..+
T Consensus 271 ~~kal~~GAd~V~ig 285 (332)
T 1vcf_A 271 GAKALALGADLLAVA 285 (332)
T ss_dssp HHHHHHHTCSEEEEC
T ss_pred HHHHHHhCCChHhhh
Confidence 333455788888763
No 316
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=78.42 E-value=7.4 Score=34.03 Aligned_cols=150 Identities=12% Similarity=0.064 Sum_probs=73.0
Q ss_pred CcCCCCccEEEEe-----ecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEE-EEee----CChHHHHHHHHHc
Q psy9039 45 SVPVGVQHGVIVE-----NMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGV-QILS----GCNKAALATAQAA 114 (251)
Q Consensus 45 l~~~Gv~D~i~ie-----N~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gv-n~~~----N~~~~~~~ia~a~ 114 (251)
+.++|+ |.|.+- ..+|.|= -+|++..-|...++.+++..+ .|+.+ .+=+ ..+..++.-+
T Consensus 50 ~e~aG~-d~ilvGdSl~~~~lG~~d-----t~~vTldemi~h~~aV~r~~~--~~~vvaD~pfgsy~~s~~~a~~na--- 118 (281)
T 1oy0_A 50 FDEAGI-PVLLVGDSAANVVYGYDT-----TVPISIDELIPLVRGVVRGAP--HALVVADLPFGSYEAGPTAALAAA--- 118 (281)
T ss_dssp HHTTTC-CEEEECTTHHHHTTCCSS-----SSSCCGGGTHHHHHHHHHHCT--TSEEEEECCTTSSTTCHHHHHHHH---
T ss_pred HHHcCC-CEEEECHHHHHHHcCCCC-----CCCCCHHHHHHHHHHHHhcCC--CCeEEEECCCCcccCCHHHHHHHH---
Confidence 478999 999863 2334422 356777778888899988877 46554 2211 0111111111
Q ss_pred CccceecccccccccCCCceeecCcchhHHHHHhcCCCcchhhhhh--Hhhc-----cCCCCCCcccHHHHHHHhh---h
Q psy9039 115 GLDFIRAESFVFGHMADEGLMNAQAGPLLRYRKQIGADNVLVFTDI--KKKH-----SSHAITADVDITETAKAAS---F 184 (251)
Q Consensus 115 g~~Fir~~~~~~~~~~~~Gli~~da~e~~~~r~~l~~~~i~i~a~v--~~k~-----~~~~~~~~~~i~~~a~~a~---~ 184 (251)
.++++. .|.+|+-..+..+....-+.+-...|.+++.+ .|+. +.-....+.+.+++.+.|. .
T Consensus 119 -~rl~~e-------aGa~aVklEdg~e~~~~I~al~~agIpV~gHiGLtPqsv~~~ggf~v~grt~~a~~~i~rA~a~~e 190 (281)
T 1oy0_A 119 -TRFLKD-------GGAHAVKLEGGERVAEQIACLTAAGIPVMAHIGFTPQSVNTLGGFRVQGRGDAAEQTIADAIAVAE 190 (281)
T ss_dssp -HHHHHT-------TCCSEEEEEBSGGGHHHHHHHHHHTCCEEEEEECCC--------------CHHHHHHHHHHHHHHH
T ss_pred -HHHHHH-------hCCeEEEECCcHHHHHHHHHHHHCCCCEEeeecCCcceecccCCeEEEeCcHHHHHHHHHHHHHHH
Confidence 133321 23444433333232222222211233333211 1110 0000011113345555554 2
Q ss_pred ccccEEEecCCCCCCCCCHHHHHHHHhcCCCCEEE
Q psy9039 185 FLSDGLIITGNATGDPADVSQLMSVKNAVDLPILI 219 (251)
Q Consensus 185 ~~~D~v~VTG~~~g~~~~~~~l~~vr~~~~~PV~v 219 (251)
.|||++++-+.. .++.+++.+.+++|++-
T Consensus 191 AGA~~ivlE~vp------~~~a~~it~~l~iP~ig 219 (281)
T 1oy0_A 191 AGAFAVVMEMVP------AELATQITGKLTIPTVG 219 (281)
T ss_dssp HTCSEEEEESCC------HHHHHHHHHHCSSCEEE
T ss_pred cCCcEEEEecCC------HHHHHHHHHhCCCCEEE
Confidence 699999997742 35677888889999874
No 317
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=78.31 E-value=4 Score=36.62 Aligned_cols=86 Identities=10% Similarity=0.034 Sum_probs=53.2
Q ss_pred hhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCCCCCCCCHHHHHHHHhcCCCCEEEe
Q psy9039 141 PLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNATGDPADVSQLMSVKNAVDLPILIG 220 (251)
Q Consensus 141 e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~g~~~~~~~l~~vr~~~~~PV~vG 220 (251)
-+...|+.+|. ++.+.-|.+ .+ .+.....+.++..+.+++ .+ - ...+ +.+.++++|+.+++||+.+
T Consensus 178 ~v~avr~a~g~-d~~l~vDan--~~----~~~~~a~~~~~~l~~~~i-~i--E---~P~~-~~~~~~~l~~~~~iPI~~d 243 (379)
T 2rdx_A 178 RIRACLPLLEP-GEKAMADAN--QG----WRVDNAIRLARATRDLDY-IL--E---QPCR-SYEECQQVRRVADQPMKLD 243 (379)
T ss_dssp HHHHHGGGSCT-TCEEEEECT--TC----SCHHHHHHHHHHTTTSCC-EE--E---CCSS-SHHHHHHHHTTCCSCEEEC
T ss_pred HHHHHHHhcCC-CCEEEEECC--CC----CCHHHHHHHHHHHHhCCe-EE--e---CCcC-CHHHHHHHHhhCCCCEEEe
Confidence 34445666653 555543432 11 111222334444444666 43 1 1223 7888999999999999999
Q ss_pred cCC-ChHhHHHhhc---CCEEEEe
Q psy9039 221 SGV-TSDNVEHYMT---ADALIIG 240 (251)
Q Consensus 221 ~GI-~~~~v~~~~~---ADGvIVG 240 (251)
..+ +++++.++++ +|.+.+.
T Consensus 244 e~i~~~~~~~~~i~~~~~d~v~ik 267 (379)
T 2rdx_A 244 ECVTGLHMAQRIVADRGAEICCLK 267 (379)
T ss_dssp TTCCSHHHHHHHHHHTCCSEEEEE
T ss_pred CCcCCHHHHHHHHHcCCCCEEEEe
Confidence 999 6899998874 9999874
No 318
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=78.31 E-value=4.6 Score=35.06 Aligned_cols=58 Identities=19% Similarity=0.327 Sum_probs=37.0
Q ss_pred hccccEEEecCCCCCCCC--CH----HHHHHHHhcC--CCCEEEecCC-Ch-HhHH---Hhhc--CCEEEEece
Q psy9039 184 FFLSDGLIITGNATGDPA--DV----SQLMSVKNAV--DLPILIGSGV-TS-DNVE---HYMT--ADALIIGSH 242 (251)
Q Consensus 184 ~~~~D~v~VTG~~~g~~~--~~----~~l~~vr~~~--~~PV~vG~GI-~~-~~v~---~~~~--ADGvIVGS~ 242 (251)
..|+|++++.|+. |+.. +. +.++.+++.+ ++||++|-|- +. +.++ .+.+ |||+.+-+-
T Consensus 32 ~~Gv~gl~~~Gtt-GE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 104 (289)
T 2yxg_A 32 ENGVSGIVAVGTT-GESPTLSHEEHKKVIEKVVDVVNGRVQVIAGAGSNCTEEAIELSVFAEDVGADAVLSITP 104 (289)
T ss_dssp HTTCSEEEESSTT-TTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HCCCCEEEECccc-cChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 3699999998874 5432 22 3345555544 5999999998 44 3333 2223 999988653
No 319
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=78.01 E-value=18 Score=31.41 Aligned_cols=198 Identities=12% Similarity=0.054 Sum_probs=88.4
Q ss_pred CcceEEEeeeecccccccCCCCCCCcchHHHHHHHHHhhCCCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHH
Q psy9039 3 QKHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLC 82 (251)
Q Consensus 3 ~~~~~~~~~~~~~p~~~~~pG~P~~~~~~~~i~~~a~~~a~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i 82 (251)
.+.|++.- -.-|| .. |+-+++.-.+.+ +-+++.|+ |||.+-=-.|=-++. .-.+.. +++
T Consensus 8 ~~~Gv~~a--~vTPf-~d--g~iD~~~l~~lv--------~~li~~Gv-~gl~v~GttGE~~~L---s~~Er~----~v~ 66 (301)
T 3m5v_A 8 IIIGAMTA--LITPF-KN--GKVDEQSYARLI--------KRQIENGI-DAVVPVGTTGESATL---THEEHR----TCI 66 (301)
T ss_dssp CCCEEEEE--CCCCE-ET--TEECHHHHHHHH--------HHHHHTTC-CEEECSSTTTTGGGS---CHHHHH----HHH
T ss_pred cCCceeEe--eecCc-CC--CCCCHHHHHHHH--------HHHHHcCC-CEEEECccccChhhC---CHHHHH----HHH
Confidence 34555542 23466 55 655555444444 55778999 999762111111111 112232 344
Q ss_pred HHHHHhCCC-CccEEEEEeeCChHHHHHHH---HHcCccceecccccccccCCCceeecCcchhHHHHHhcCC-Ccchh-
Q psy9039 83 AEIRKVLPP-SVPVGVQILSGCNKAALATA---QAAGLDFIRAESFVFGHMADEGLMNAQAGPLLRYRKQIGA-DNVLV- 156 (251)
Q Consensus 83 ~~vr~~~~~-~~P~Gvn~~~N~~~~~~~ia---~a~g~~Fir~~~~~~~~~~~~Gli~~da~e~~~~r~~l~~-~~i~i- 156 (251)
+.+.+.... .+|+.+.+-.|....+...+ ...|++.+-.- ..-...+..+++.++.+.+-. -++.+
T Consensus 67 ~~~~~~~~g~rvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~--------~P~y~~~s~~~l~~~f~~va~a~~lPii 138 (301)
T 3m5v_A 67 EIAVETCKGTKVKVLAGAGSNATHEAVGLAKFAKEHGADGILSV--------APYYNKPTQQGLYEHYKAIAQSVDIPVL 138 (301)
T ss_dssp HHHHHHHTTSSCEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEE--------CCCSSCCCHHHHHHHHHHHHHHCSSCEE
T ss_pred HHHHHHhCCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEc--------CCCCCCCCHHHHHHHHHHHHHhCCCCEE
Confidence 444443322 26888887776644444433 23444433320 111112234555555544311 12222
Q ss_pred hhhhHhhccCCCCCCcccHHHHHHHhhh-ccccEEEecCCCCCCCCCHHHHHHHHhcC-CCCEEEecCCChHhHHHhhc-
Q psy9039 157 FTDIKKKHSSHAITADVDITETAKAASF-FLSDGLIITGNATGDPADVSQLMSVKNAV-DLPILIGSGVTSDNVEHYMT- 233 (251)
Q Consensus 157 ~a~v~~k~~~~~~~~~~~i~~~a~~a~~-~~~D~v~VTG~~~g~~~~~~~l~~vr~~~-~~PV~vG~GI~~~~v~~~~~- 233 (251)
++++-...|..+ +.+.+.+.++. -.+- |-+. ...+...+.++++.. +.-|+.|. ..--+..+..
T Consensus 139 lYn~P~~tg~~l-----~~~~~~~La~~~pniv-----giKd-ssgd~~~~~~~~~~~~~f~v~~G~--d~~~~~~l~~G 205 (301)
T 3m5v_A 139 LYNVPGRTGCEI-----STDTIIKLFRDCENIY-----GVKE-ASGNIDKCVDLLAHEPRMMLISGE--DAINYPILSNG 205 (301)
T ss_dssp EEECHHHHSCCC-----CHHHHHHHHHHCTTEE-----EEEE-CSSCHHHHHHHHHHCTTSEEEECC--GGGHHHHHHTT
T ss_pred EEeCchhhCcCC-----CHHHHHHHHhcCCCEE-----EEEe-CCCCHHHHHHHHHhCCCeEEEEcc--HHHHHHHHHcC
Confidence 333333334442 33333333332 1221 2121 122566666666554 45555443 2222334444
Q ss_pred CCEEEEece
Q psy9039 234 ADALIIGSH 242 (251)
Q Consensus 234 ADGvIVGS~ 242 (251)
+||+|-|++
T Consensus 206 ~~G~is~~~ 214 (301)
T 3m5v_A 206 GKGVISVTS 214 (301)
T ss_dssp CCEEEESGG
T ss_pred CCEEEehHH
Confidence 999998764
No 320
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=78.01 E-value=5 Score=34.73 Aligned_cols=56 Identities=20% Similarity=0.219 Sum_probs=38.8
Q ss_pred HHHhhhccccEEEe-cCCCCCCCCCHHHHHHHHhcC--CCCEEEecCC-ChHhHHHhhc--CC
Q psy9039 179 AKAASFFLSDGLII-TGNATGDPADVSQLMSVKNAV--DLPILIGSGV-TSDNVEHYMT--AD 235 (251)
Q Consensus 179 a~~a~~~~~D~v~V-TG~~~g~~~~~~~l~~vr~~~--~~PV~vG~GI-~~~~v~~~~~--AD 235 (251)
++.+...|+|.+=+ ||..++ ..+.+.++-+|+.+ ++||-+.||| |.+++.+++. |+
T Consensus 179 ~~ia~eaGADfVKTSTGf~~~-GAT~edV~lm~~~vg~~v~VKaAGGIrt~~~al~mi~aGA~ 240 (260)
T 3r12_A 179 CVISKLAGAHFVKTSTGFGTG-GATAEDVHLMKWIVGDEMGVKASGGIRTFEDAVKMIMYGAD 240 (260)
T ss_dssp HHHHHHTTCSEEECCCSSSSC-CCCHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHTTCS
T ss_pred HHHHHHhCcCEEEcCCCCCCC-CCCHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHcCCc
Confidence 33344579999844 555433 33456666666654 6999999999 6899999986 77
No 321
>3tfx_A Orotidine 5'-phosphate decarboxylase; PSI-biology, nysgrc, 000529, structural genomics, NEW YORK S genomics research consortium; 2.19A {Lactobacillus acidophilus}
Probab=77.76 E-value=1.8 Score=37.49 Aligned_cols=60 Identities=17% Similarity=0.259 Sum_probs=39.3
Q ss_pred HHHHHhhhccccEEEecCCCCCCCCCHHHHHHHHhcC-CCCEEEecCCChH-----------hHHHhhc--CCEEEEece
Q psy9039 177 ETAKAASFFLSDGLIITGNATGDPADVSQLMSVKNAV-DLPILIGSGVTSD-----------NVEHYMT--ADALIIGSH 242 (251)
Q Consensus 177 ~~a~~a~~~~~D~v~VTG~~~g~~~~~~~l~~vr~~~-~~PV~vG~GI~~~-----------~v~~~~~--ADGvIVGS~ 242 (251)
+.++.+...|+|+++.+ ...++.+|+.+ +-.+++--||.++ +..++.. ||-+||||.
T Consensus 148 ~~A~~a~~~G~dGvV~s---------~~e~~~ir~~~~~~f~~vtPGIr~~g~~~gDQ~Rv~T~~~a~~aGad~iVvGr~ 218 (259)
T 3tfx_A 148 SLAKMAKHSGADGVICS---------PLEVKKLHENIGDDFLYVTPGIRPAGNAKDDQSRVATPKMAKEWGSSAIVVGRP 218 (259)
T ss_dssp HHHHHHHHTTCCEEECC---------GGGHHHHHHHHCSSSEEEECCCCCC-----------CHHHHHHTTCSEEEECHH
T ss_pred HHHHHHHHhCCCEEEEC---------HHHHHHHHhhcCCccEEEcCCcCCCCCCcCCccccCCHHHHHHcCCCEEEEChH
Confidence 34444445689998765 12355566655 4557777888653 2556664 999999998
Q ss_pred Eee
Q psy9039 243 FKQ 245 (251)
Q Consensus 243 ~~~ 245 (251)
+-+
T Consensus 219 I~~ 221 (259)
T 3tfx_A 219 ITL 221 (259)
T ss_dssp HHT
T ss_pred HhC
Confidence 754
No 322
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=77.66 E-value=4.3 Score=36.16 Aligned_cols=57 Identities=19% Similarity=0.251 Sum_probs=36.7
Q ss_pred ccccEEEecCCCCCCCC--CH----HHHHHHHhcC--CCCEEEecCC-Ch-HhHH---Hhhc--CCEEEEece
Q psy9039 185 FLSDGLIITGNATGDPA--DV----SQLMSVKNAV--DLPILIGSGV-TS-DNVE---HYMT--ADALIIGSH 242 (251)
Q Consensus 185 ~~~D~v~VTG~~~g~~~--~~----~~l~~vr~~~--~~PV~vG~GI-~~-~~v~---~~~~--ADGvIVGS~ 242 (251)
.|+|++++-|+. |+.. +. +.++.+++.+ ++||++|-|- +. +.++ .+.+ |||+.+-+-
T Consensus 67 ~Gv~Gl~v~GtT-GE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P 138 (332)
T 2r8w_A 67 AEVDSVGILGST-GIYMYLTREERRRAIEAAATILRGRRTLMAGIGALRTDEAVALAKDAEAAGADALLLAPV 138 (332)
T ss_dssp HTCSEEEESSTT-TTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECCSSHHHHHHHHHHHHHHTCSEEEECCC
T ss_pred cCCCEEEECccc-cChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 599999998874 5432 22 3355555554 5999999998 44 3333 2223 999988653
No 323
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=77.65 E-value=4.3 Score=35.87 Aligned_cols=58 Identities=22% Similarity=0.373 Sum_probs=37.4
Q ss_pred hccccEEEecCCCCCCCC--CH----HHHHHHHhcC--CCCEEEecCC-ChHh-HH---Hhhc--CCEEEEece
Q psy9039 184 FFLSDGLIITGNATGDPA--DV----SQLMSVKNAV--DLPILIGSGV-TSDN-VE---HYMT--ADALIIGSH 242 (251)
Q Consensus 184 ~~~~D~v~VTG~~~g~~~--~~----~~l~~vr~~~--~~PV~vG~GI-~~~~-v~---~~~~--ADGvIVGS~ 242 (251)
..|+|++++.|+. |+.. +. +.++.+++.+ .+||++|-|- +.++ ++ .+.+ |||+.+-+-
T Consensus 43 ~~Gv~gl~v~GtT-GE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 115 (318)
T 3qfe_A 43 RSGLTGLVILGTN-AEAFLLTREERAQLIATARKAVGPDFPIMAGVGAHSTRQVLEHINDASVAGANYVLVLPP 115 (318)
T ss_dssp TTTCSEEEESSGG-GTGGGSCHHHHHHHHHHHHHHHCTTSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCC
T ss_pred HcCCCEEEeCccc-cChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 3699999998874 4432 22 3355555554 6999999997 5433 33 2223 999998764
No 324
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=77.63 E-value=4.2 Score=35.85 Aligned_cols=57 Identities=25% Similarity=0.473 Sum_probs=36.6
Q ss_pred hccccEEEecCCCCCCCC--CH----HHHHHHHhcC--CCCEEEecCC-Ch-HhHH---Hhhc--CCEEEEec
Q psy9039 184 FFLSDGLIITGNATGDPA--DV----SQLMSVKNAV--DLPILIGSGV-TS-DNVE---HYMT--ADALIIGS 241 (251)
Q Consensus 184 ~~~~D~v~VTG~~~g~~~--~~----~~l~~vr~~~--~~PV~vG~GI-~~-~~v~---~~~~--ADGvIVGS 241 (251)
..|+|++++.|+. |+.. +. +.++.+++.+ .+||++|-|- +. +.++ .+.+ |||+.+-+
T Consensus 55 ~~Gv~Gl~v~GtT-GE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~ 126 (314)
T 3qze_A 55 QEGTNAIVAVGTT-GESATLDVEEHIQVIRRVVDQVKGRIPVIAGTGANSTREAVALTEAAKSGGADACLLVT 126 (314)
T ss_dssp HHTCCEEEESSGG-GTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred HcCCCEEEECccc-cChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEEcC
Confidence 3599999998873 4432 22 3344555554 5999999997 44 3333 2223 99998875
No 325
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=77.47 E-value=17 Score=31.42 Aligned_cols=170 Identities=12% Similarity=0.129 Sum_probs=77.2
Q ss_pred CCCcCCCCccEEEEeecCC-CCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeCChHHHHHHHHH---cCccc
Q psy9039 43 PPSVPVGVQHGVIVENMHD-VPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQILSGCNKAALATAQA---AGLDF 118 (251)
Q Consensus 43 ~~l~~~Gv~D~i~ieN~~~-~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~~~~~~ia~a---~g~~F 118 (251)
+-++++|+ |||.+-=-.| .|.- .-.+..+-+..+++.++. . +|+.+-+-.|....+...+.. .|++.
T Consensus 29 ~~li~~Gv-~gl~~~GttGE~~~L----s~~Er~~v~~~~~~~~~g--r--~pviaGvg~~~t~~ai~la~~a~~~Gada 99 (292)
T 2ojp_A 29 DYHVASGT-SAIVSVGTTGESATL----NHDEHADVVMMTLDLADG--R--IPVIAGTGANATAEAISLTQRFNDSGIVG 99 (292)
T ss_dssp HHHHHHTC-CEEEESSTTTTGGGS----CHHHHHHHHHHHHHHHTT--S--SCEEEECCCSSHHHHHHHHHHTTTSSCSE
T ss_pred HHHHHcCC-CEEEECccccchhhC----CHHHHHHHHHHHHHHhCC--C--CcEEEecCCccHHHHHHHHHHHHhcCCCE
Confidence 55677899 9998621111 2211 122333333333333332 2 688877777664444544433 22222
Q ss_pred eecccccccccCCCceeecCcchhHHHHHhcCC-Ccchh-hhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCC
Q psy9039 119 IRAESFVFGHMADEGLMNAQAGPLLRYRKQIGA-DNVLV-FTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNA 196 (251)
Q Consensus 119 ir~~~~~~~~~~~~Gli~~da~e~~~~r~~l~~-~~i~i-~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~ 196 (251)
+-. ...-...+..+++.++.+.+-. -++.+ ++++-...|.. .+.+.+.+.++. .- |.|-+
T Consensus 100 vlv--------~~P~y~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~-----l~~~~~~~La~~--pn---ivgiK 161 (292)
T 2ojp_A 100 CLT--------VTPYYNRPSQEGLYQHFKAIAEHTDLPQILYNVPSRTGCD-----LLPETVGRLAKV--KN---IIGIX 161 (292)
T ss_dssp EEE--------ECCCSSCCCHHHHHHHHHHHHTTCSSCEEEECCHHHHSCC-----CCHHHHHHHHTS--TT---EEEC-
T ss_pred EEE--------CCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCcchhccC-----CCHHHHHHHHcC--CC---EEEEe
Confidence 211 0111112345566666555421 12333 33333233433 233334444432 11 33433
Q ss_pred CCCCCCHHHHHHHHhcC--CCCEEEecCCChHhHHHhhc-CCEEEEece
Q psy9039 197 TGDPADVSQLMSVKNAV--DLPILIGSGVTSDNVEHYMT-ADALIIGSH 242 (251)
Q Consensus 197 ~g~~~~~~~l~~vr~~~--~~PV~vG~GI~~~~v~~~~~-ADGvIVGS~ 242 (251)
. ...+...+.++++.+ +.-|+.|.. .--+..+.. ++|+|-|++
T Consensus 162 ~-s~gd~~~~~~~~~~~~~~f~v~~G~d--~~~~~~l~~G~~G~is~~~ 207 (292)
T 2ojp_A 162 E-ATGNLTRVNQIKELVSDDFVLLSGDD--ASALDFMQYGGHGVISVTA 207 (292)
T ss_dssp C-CSCCTHHHHHHHTTSCTTSBCEESCG--GGHHHHHHTTCCEEEESGG
T ss_pred C-CCCCHHHHHHHHHhcCCCEEEEECcH--HHHHHHHHCCCcEEEeCHH
Confidence 2 123466777777665 455655542 222333444 999998865
No 326
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=77.45 E-value=5 Score=35.98 Aligned_cols=41 Identities=17% Similarity=0.386 Sum_probs=29.1
Q ss_pred HHHHHHhcCCCCEE-EecCCChHhHHHhh----c--C--CEEEEeceEee
Q psy9039 205 QLMSVKNAVDLPIL-IGSGVTSDNVEHYM----T--A--DALIIGSHFKQ 245 (251)
Q Consensus 205 ~l~~vr~~~~~PV~-vG~GI~~~~v~~~~----~--A--DGvIVGS~~~~ 245 (251)
.++++.+.+++|++ +++|.+.+.+.+.+ . | .|+.+|-++-+
T Consensus 236 ~f~~~~~a~~~P~v~lsgG~~~~~fl~~v~~A~~aGa~f~Gv~~GRnvwq 285 (332)
T 3iv3_A 236 AFREQEASTDLPYIYLSAGVSAELFQETLVFAHKAGAKFNGVLCGRATWA 285 (332)
T ss_dssp HHHHHHHTCSSCEEEECTTCCHHHHHHHHHHHHHHTCCCCEEEECHHHHT
T ss_pred HHHHHHhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCCcceEEeeHHHHH
Confidence 36666677899965 79999865554443 3 8 99999965433
No 327
>3s6d_A Putative triosephosphate isomerase; seattle structural genomics center for infectious disease, S pathogenic fungus, eukaryote; 2.20A {Coccidioides immitis RS}
Probab=77.42 E-value=0.54 Score=41.85 Aligned_cols=31 Identities=16% Similarity=0.253 Sum_probs=26.9
Q ss_pred CCCEEEecCCChHhHHH--hhc-CCEEEEeceEe
Q psy9039 214 DLPILIGSGVTSDNVEH--YMT-ADALIIGSHFK 244 (251)
Q Consensus 214 ~~PV~vG~GI~~~~v~~--~~~-ADGvIVGS~~~ 244 (251)
+++|+-||+++++|+.+ +.. .||+.||++-.
T Consensus 260 ~vrILYGGSV~~~n~~~~~l~~dVDG~LVGgASL 293 (310)
T 3s6d_A 260 EVRILYGGSAGPGLWGPGGLGKEVDGMFLGRFAH 293 (310)
T ss_dssp CEEEEEEEEECTTTTTTTSGGGTCSEEEECGGGG
T ss_pred ceeEEEcCccCHHHHhhhcccCCCCEEEeeheee
Confidence 58999999999999998 656 99999998643
No 328
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=77.42 E-value=10 Score=33.36 Aligned_cols=171 Identities=14% Similarity=0.096 Sum_probs=74.1
Q ss_pred CCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeCChHHHHHH---HHHcCccce
Q psy9039 43 PPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQILSGCNKAALAT---AQAAGLDFI 119 (251)
Q Consensus 43 ~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~~~~~~i---a~a~g~~Fi 119 (251)
+-|++.|+ |||.+ +|.-=.-+.-.-.+..+-+..+++.++. .+|+.+.+-.|....+... |...|++.+
T Consensus 50 ~~li~~Gv-~Gl~v---~GtTGE~~~Ls~~Er~~v~~~~v~~~~g----rvpViaGvg~~st~~ai~la~~A~~~Gadav 121 (315)
T 3si9_A 50 EWQITQGI-NGVSP---VGTTGESPTLTHEEHKRIIELCVEQVAK----RVPVVAGAGSNSTSEAVELAKHAEKAGADAV 121 (315)
T ss_dssp HHHHHTTC-SEEEC---SSTTTTGGGSCHHHHHHHHHHHHHHHTT----SSCBEEECCCSSHHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHcCC-CEEEe---CccccCccccCHHHHHHHHHHHHHHhCC----CCcEEEeCCCCCHHHHHHHHHHHHhcCCCEE
Confidence 55778999 99975 3321000000122333333333333332 2688887777764444433 333444433
Q ss_pred ecccccccccCCCceeecCcchhHHHHHhcCC-Ccchh-hhhhHhhccCCCCCCcccHHHHHHHhh-hccccEEEecCCC
Q psy9039 120 RAESFVFGHMADEGLMNAQAGPLLRYRKQIGA-DNVLV-FTDIKKKHSSHAITADVDITETAKAAS-FFLSDGLIITGNA 196 (251)
Q Consensus 120 r~~~~~~~~~~~~Gli~~da~e~~~~r~~l~~-~~i~i-~a~v~~k~~~~~~~~~~~i~~~a~~a~-~~~~D~v~VTG~~ 196 (251)
-.- ..-...+..+++.++.+.+-. -++.+ ++++-...|..+ +.+.+.+.++ .-.+-+ + +
T Consensus 122 lv~--------~P~y~~~~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l-----~~~~~~~La~~~pnIvg--i---K 183 (315)
T 3si9_A 122 LVV--------TPYYNRPNQRGLYTHFSSIAKAISIPIIIYNIPSRSVIDM-----AVETMRDLCRDFKNIIG--V---K 183 (315)
T ss_dssp EEE--------CCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCC-----CHHHHHHHHHHCTTEEE--E---E
T ss_pred EEC--------CCCCCCCCHHHHHHHHHHHHHcCCCCEEEEeCchhhCCCC-----CHHHHHHHHhhCCCEEE--E---E
Confidence 321 011112234455555544311 12222 333333334442 3333334343 212212 1 1
Q ss_pred CCCCCCHHHHHHHHhcC--CCCEEEecCCChHhHHHhhc-CCEEEEece
Q psy9039 197 TGDPADVSQLMSVKNAV--DLPILIGSGVTSDNVEHYMT-ADALIIGSH 242 (251)
Q Consensus 197 ~g~~~~~~~l~~vr~~~--~~PV~vG~GI~~~~v~~~~~-ADGvIVGS~ 242 (251)
.. ..++..+.++++.+ +.-|+.|. ..--...+.. ++|+|-+++
T Consensus 184 ds-sgd~~~~~~l~~~~~~~f~v~~G~--d~~~l~~l~~G~~G~is~~a 229 (315)
T 3si9_A 184 DA-TGKIERASEQREKCGKDFVQLSGD--DCTALGFNAHGGVGCISVSS 229 (315)
T ss_dssp EC-SCCTHHHHHHHHHHCSSSEEEESC--GGGHHHHHHTTCCEEEESGG
T ss_pred eC-CCCHHHHHHHHHHcCCCeEEEecC--HHHHHHHHHcCCCEEEecHH
Confidence 11 12355555555544 45565553 2222333444 999998865
No 329
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=77.37 E-value=14 Score=32.68 Aligned_cols=165 Identities=10% Similarity=0.072 Sum_probs=0.0
Q ss_pred HHHHHhhCC-CCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHH------hCCCCccEEEEEeeCChHHH
Q psy9039 35 CAEIRKVLP-PSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRK------VLPPSVPVGVQILSGCNKAA 107 (251)
Q Consensus 35 ~~~a~~~a~-~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~------~~~~~~P~Gvn~~~N~~~~~ 107 (251)
.+.-++=++ .|.+.|+ |.|++ |.|-+.|. -.+.++++++ ..+ ......+..|. . -
T Consensus 40 ~~~k~~i~~~~L~~~Gv-~~IE~----g~~~~~~~---------~~~~v~~~~~~~~~~~~~~--~~~i~~l~~~~-~-~ 101 (337)
T 3ble_A 40 TSEKLNIAKFLLQKLNV-DRVEI----ASARVSKG---------ELETVQKIMEWAATEQLTE--RIEILGFVDGN-K-T 101 (337)
T ss_dssp HHHHHHHHHHHHHTTCC-SEEEE----EETTSCTT---------HHHHHHHHHHHHHHTTCGG--GEEEEEESSTT-H-H
T ss_pred HHHHHHHHHHHHHHcCC-CEEEE----eCCCCChh---------HHHHHHHHHhhhhhhccCC--CCeEEEEccch-h-h
Q ss_pred HHHHHHcCccceecccccccccCCCceee-------------------cCcchhHHHHHhcCCCcchhhhhh---Hhhcc
Q psy9039 108 LATAQAAGLDFIRAESFVFGHMADEGLMN-------------------AQAGPLLRYRKQIGADNVLVFTDI---KKKHS 165 (251)
Q Consensus 108 ~~ia~a~g~~Fir~~~~~~~~~~~~Gli~-------------------~da~e~~~~r~~l~~~~i~i~a~v---~~k~~ 165 (251)
+..|...|.+.++. .. ....+..++.++.|. .+.+-..- ..+
T Consensus 102 i~~a~~~g~~~v~i-------------~~~~s~~~~~~~~~~s~~e~l~~~~~~v~~ak~~G~-~v~~~~~~~~~~~~-- 165 (337)
T 3ble_A 102 VDWIKDSGAKVLNL-------------LTKGSLHHLEKQLGKTPKEFFTDVSFVIEYAIKSGL-KINVYLEDWSNGFR-- 165 (337)
T ss_dssp HHHHHHHTCCEEEE-------------EEECSHHHHHHHTCCCHHHHHHHHHHHHHHHHHTTC-EEEEEEETHHHHHH--
T ss_pred HHHHHHCCCCEEEE-------------EEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCC-EEEEEEEECCCCCc--
Q ss_pred CCCCCCcccHHHHHHHhhhccccEEEecCCCCCCCCCH--HHHHHHHhcC-CCCEEEe----cCCChHhHHHhhc--CCE
Q psy9039 166 SHAITADVDITETAKAASFFLSDGLIITGNATGDPADV--SQLMSVKNAV-DLPILIG----SGVTSDNVEHYMT--ADA 236 (251)
Q Consensus 166 ~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~g~~~~~--~~l~~vr~~~-~~PV~vG----~GI~~~~v~~~~~--ADG 236 (251)
++...+.+.++.+...|+|.+.+--+--...|.. ++++.+|+.+ ++|+-+= .|.-..|.-..+. |+-
T Consensus 166 ----~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~~p~~~i~~H~Hnd~GlA~AN~laAv~aGa~~ 241 (337)
T 3ble_A 166 ----NSPDYVKSLVEHLSKEHIERIFLPDTLGVLSPEETFQGVDSLIQKYPDIHFEFHGHNDYDLSVANSLQAIRAGVKG 241 (337)
T ss_dssp ----HCHHHHHHHHHHHHTSCCSEEEEECTTCCCCHHHHHHHHHHHHHHCTTSCEEEECBCTTSCHHHHHHHHHHTTCSE
T ss_pred ----CCHHHHHHHHHHHHHcCCCEEEEecCCCCcCHHHHHHHHHHHHHhcCCCeEEEEecCCcchHHHHHHHHHHhCCCE
Q ss_pred E
Q psy9039 237 L 237 (251)
Q Consensus 237 v 237 (251)
+
T Consensus 242 v 242 (337)
T 3ble_A 242 L 242 (337)
T ss_dssp E
T ss_pred E
No 330
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=77.32 E-value=6.8 Score=34.07 Aligned_cols=66 Identities=23% Similarity=0.191 Sum_probs=41.3
Q ss_pred HHHHHHhhhccccEE-Eec------CCCCC--CCCCHHHHHHHHhcCCCCEEEecCCC-hHhHHHhhc--CCEEEEece
Q psy9039 176 TETAKAASFFLSDGL-IIT------GNATG--DPADVSQLMSVKNAVDLPILIGSGVT-SDNVEHYMT--ADALIIGSH 242 (251)
Q Consensus 176 ~~~a~~a~~~~~D~v-~VT------G~~~g--~~~~~~~l~~vr~~~~~PV~vG~GI~-~~~v~~~~~--ADGvIVGS~ 242 (251)
.+.++.+...|+|++ .++ ....| ...+.+.++++++.+++|++++--+. .+.+..+.. ||++. ++.
T Consensus 31 ~~~a~~~~~~Ga~~I~~l~p~~~~~~~~~G~~~~~~~~~i~~I~~~~~iPv~~k~r~g~~~~~~~~~a~GAd~V~-~~~ 108 (305)
T 2nv1_A 31 AEQAKIAEEAGAVAVMALERVPADIRAAGGVARMADPTIVEEVMNAVSIPVMAKARIGHIVEARVLEAMGVDYID-ESE 108 (305)
T ss_dssp HHHHHHHHHTTCSEEEECCC-------CCCCCCCCCHHHHHHHHHHCSSCEEEEECTTCHHHHHHHHHHTCSEEE-ECT
T ss_pred HHHHHHHHHcCCCEEEEcCCCcchhhhccCcccCCCHHHHHHHHHhCCCCEEecccccchHHHHHHHHCCCCEEE-Eec
Confidence 455666666789998 553 22222 23357889999998999999654332 344444443 99997 653
No 331
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=77.28 E-value=4.9 Score=35.95 Aligned_cols=58 Identities=26% Similarity=0.426 Sum_probs=37.1
Q ss_pred hccccEEEecCCCCCCCC--CH----HHHHHHHhcC--CCCEEEecCC-Ch-HhHH---Hhhc--CCEEEEece
Q psy9039 184 FFLSDGLIITGNATGDPA--DV----SQLMSVKNAV--DLPILIGSGV-TS-DNVE---HYMT--ADALIIGSH 242 (251)
Q Consensus 184 ~~~~D~v~VTG~~~g~~~--~~----~~l~~vr~~~--~~PV~vG~GI-~~-~~v~---~~~~--ADGvIVGS~ 242 (251)
..|+|++++.|+. |+.. +. +.++.+++.+ ++||++|-|- +. +.++ .+.+ |||+.|-+-
T Consensus 63 ~~Gv~Gl~v~GtT-GE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P 135 (343)
T 2v9d_A 63 KAGVDGLFFLGSG-GEFSQLGAEERKAIARFAIDHVDRRVPVLIGTGGTNARETIELSQHAQQAGADGIVVINP 135 (343)
T ss_dssp HTTCSCEEESSTT-TTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCSSCHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HcCCCEEEeCccc-cChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 3699999998874 4432 22 3355555554 6999999997 54 3333 2223 999988653
No 332
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=77.24 E-value=4.6 Score=35.43 Aligned_cols=58 Identities=16% Similarity=0.397 Sum_probs=36.8
Q ss_pred hccccEEEecCCCCCCCC--CH----HHHHHHHhcC--CCCEEEecCC-ChHh-HH---Hhhc--CCEEEEece
Q psy9039 184 FFLSDGLIITGNATGDPA--DV----SQLMSVKNAV--DLPILIGSGV-TSDN-VE---HYMT--ADALIIGSH 242 (251)
Q Consensus 184 ~~~~D~v~VTG~~~g~~~--~~----~~l~~vr~~~--~~PV~vG~GI-~~~~-v~---~~~~--ADGvIVGS~ 242 (251)
..|+|++++.|+. |+.. +. +.++.+++.+ ++||++|-|- +.++ ++ .+.+ |||+.+-+-
T Consensus 44 ~~Gv~gl~v~GtT-GE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~P 116 (306)
T 1o5k_A 44 ENGVNALIVLGTT-GESPTVNEDEREKLVSRTLEIVDGKIPVIVGAGTNSTEKTLKLVKQAEKLGANGVLVVTP 116 (306)
T ss_dssp HTTCCEEEESSGG-GTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HcCCCEEEeCccc-cchhhCCHHHHHHHHHHHHHHhCCCCeEEEcCCCccHHHHHHHHHHHHhcCCCEEEECCC
Confidence 3599999998873 4432 21 3355555554 5999999998 5433 33 2222 999988653
No 333
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=77.00 E-value=3.7 Score=37.11 Aligned_cols=89 Identities=16% Similarity=0.165 Sum_probs=55.8
Q ss_pred chhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCCCCCCCCHHHHHHHHhcCCCCEEE
Q psy9039 140 GPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNATGDPADVSQLMSVKNAVDLPILI 219 (251)
Q Consensus 140 ~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~g~~~~~~~l~~vr~~~~~PV~v 219 (251)
+-+...|+.+|. ++.+.-|.+ .+ + +.....+.++..+.++++.+- ..-.+.+.+.++++|+.+++||+.
T Consensus 182 e~v~avR~a~G~-d~~l~vDan--~~--~--~~~~a~~~~~~l~~~~i~~iE----qP~~~~d~~~~~~l~~~~~iPIa~ 250 (391)
T 2qgy_A 182 QFVEKVREIVGD-ELPLMLDLA--VP--E--DLDQTKSFLKEVSSFNPYWIE----EPVDGENISLLTEIKNTFNMKVVT 250 (391)
T ss_dssp HHHHHHHHHHCS-SSCEEEECC--CC--S--CHHHHHHHHHHHGGGCCSEEE----CSSCTTCHHHHHHHHHHCSSCEEE
T ss_pred HHHHHHHHHhCC-CCEEEEEcC--CC--C--CHHHHHHHHHHHHhcCCCeEe----CCCChhhHHHHHHHHhhCCCCEEE
Confidence 344456677764 566654443 11 1 112223344444447788752 111123578899999999999999
Q ss_pred ecCC-ChHhHHHhhc---CCEEEE
Q psy9039 220 GSGV-TSDNVEHYMT---ADALII 239 (251)
Q Consensus 220 G~GI-~~~~v~~~~~---ADGvIV 239 (251)
+..+ +++.++++++ +|.+.+
T Consensus 251 dE~~~~~~~~~~~i~~~~~d~v~i 274 (391)
T 2qgy_A 251 GEKQSGLVHFRELISRNAADIFNP 274 (391)
T ss_dssp CTTCCSHHHHHHHHHTTCCSEECC
T ss_pred cCCcCCHHHHHHHHHcCCCCEEEE
Confidence 9999 7899999883 898876
No 334
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=76.99 E-value=4.2 Score=35.36 Aligned_cols=68 Identities=18% Similarity=0.237 Sum_probs=41.7
Q ss_pred cHHHHHHHhhh-ccccEEEecCCCCCCCC--CH----HHHHHHHhcC--CCCEEEecCC-ChHh-HH---Hhhc--CCEE
Q psy9039 174 DITETAKAASF-FLSDGLIITGNATGDPA--DV----SQLMSVKNAV--DLPILIGSGV-TSDN-VE---HYMT--ADAL 237 (251)
Q Consensus 174 ~i~~~a~~a~~-~~~D~v~VTG~~~g~~~--~~----~~l~~vr~~~--~~PV~vG~GI-~~~~-v~---~~~~--ADGv 237 (251)
.+++..+.... .|+|++++.|+ ||+.. +. +.++.+++.+ ++||++|-|- +.++ ++ .+.+ |||+
T Consensus 25 ~l~~lv~~li~~~Gv~gl~~~Gt-tGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadav 103 (293)
T 1f6k_A 25 GLRQIIRHNIDKMKVDGLYVGGS-TGENFMLSTEEKKEIFRIAKDEAKDQIALIAQVGSVNLKEAVELGKYATELGYDCL 103 (293)
T ss_dssp HHHHHHHHHHHTSCCSEEEESSG-GGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHHHhhCCCcEEEeCcc-ccchhhCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHHHhcCCCEE
Confidence 34444444445 69999999887 34432 21 3355555554 5999999998 5433 32 2223 9999
Q ss_pred EEece
Q psy9039 238 IIGSH 242 (251)
Q Consensus 238 IVGS~ 242 (251)
.+-+-
T Consensus 104 lv~~P 108 (293)
T 1f6k_A 104 SAVTP 108 (293)
T ss_dssp EEECC
T ss_pred EECCC
Confidence 88653
No 335
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=76.83 E-value=7.2 Score=34.29 Aligned_cols=67 Identities=16% Similarity=0.327 Sum_probs=41.3
Q ss_pred cHHHHHHHhhhccccEEEecCCCCCCCC--CH----HHHHHHHhcC--CCCEEEecCC-ChHh-HH---Hhhc--C-CEE
Q psy9039 174 DITETAKAASFFLSDGLIITGNATGDPA--DV----SQLMSVKNAV--DLPILIGSGV-TSDN-VE---HYMT--A-DAL 237 (251)
Q Consensus 174 ~i~~~a~~a~~~~~D~v~VTG~~~g~~~--~~----~~l~~vr~~~--~~PV~vG~GI-~~~~-v~---~~~~--A-DGv 237 (251)
.+++..+.....|+|++++.|+. |+.. +. +.++.+++.+ ++||++|-|- +.++ ++ .+.+ + ||+
T Consensus 29 ~l~~lv~~li~~Gv~Gl~v~GtT-GE~~~Ls~~Er~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Ga~dav 107 (311)
T 3h5d_A 29 AIPALIEHLLAHHTDGILLAGTT-AESPTLTHDEELELFAAVQKVVNGRVPLIAGVGTNDTRDSIEFVKEVAEFGGFAAG 107 (311)
T ss_dssp HHHHHHHHHHHTTCCCEEESSTT-TTGGGSCHHHHHHHHHHHHHHSCSSSCEEEECCCSSHHHHHHHHHHHHHSCCCSEE
T ss_pred HHHHHHHHHHHcCCCEEEECccc-cChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHhcCCCcEE
Confidence 44444444444699999998874 5432 22 3455555654 6999999997 4433 33 2222 5 998
Q ss_pred EEec
Q psy9039 238 IIGS 241 (251)
Q Consensus 238 IVGS 241 (251)
.+-+
T Consensus 108 lv~~ 111 (311)
T 3h5d_A 108 LAIV 111 (311)
T ss_dssp EEEC
T ss_pred EEcC
Confidence 8875
No 336
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=76.76 E-value=5.2 Score=34.53 Aligned_cols=62 Identities=15% Similarity=0.107 Sum_probs=42.4
Q ss_pred HHHHHHhhhccccEEEec-------CCCCC--CCCCHHHHHHHHhcCCCCEEEecCC-ChHhHHHhhc--CCEE
Q psy9039 176 TETAKAASFFLSDGLIIT-------GNATG--DPADVSQLMSVKNAVDLPILIGSGV-TSDNVEHYMT--ADAL 237 (251)
Q Consensus 176 ~~~a~~a~~~~~D~v~VT-------G~~~g--~~~~~~~l~~vr~~~~~PV~vG~GI-~~~~v~~~~~--ADGv 237 (251)
.+.++.+...|++++-+. ....| .....+.++++++.+++|+++..++ +.+.+..+.. ||++
T Consensus 31 ~~~a~~~~~~Ga~~i~~~e~v~~~~~~~~G~~~~~~~~~i~~i~~~~~~Pvi~~~~~~~~~~~~~~~~aGad~v 104 (297)
T 2zbt_A 31 PEQAVIAEEAGAVAVMALERVPADIRAQGGVARMSDPKIIKEIMAAVSIPVMAKVRIGHFVEAMILEAIGVDFI 104 (297)
T ss_dssp HHHHHHHHHHTCSEEEECSSCHHHHHHTTCCCCCCCHHHHHHHHTTCSSCEEEEEETTCHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHCCCcEEEeccccchHHHhhcCCccCCCHHHHHHHHHhcCCCeEEEeccCCHHHHHHHHHCCCCEE
Confidence 345555555678887441 11112 2335788999999999999988777 5677887775 9999
No 337
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=76.65 E-value=4.8 Score=35.00 Aligned_cols=58 Identities=19% Similarity=0.412 Sum_probs=36.7
Q ss_pred hccccEEEecCCCCCCCC--CH----HHHHHHHhcC--CCCEEEecCC-Ch-HhHH---Hhhc--CCEEEEece
Q psy9039 184 FFLSDGLIITGNATGDPA--DV----SQLMSVKNAV--DLPILIGSGV-TS-DNVE---HYMT--ADALIIGSH 242 (251)
Q Consensus 184 ~~~~D~v~VTG~~~g~~~--~~----~~l~~vr~~~--~~PV~vG~GI-~~-~~v~---~~~~--ADGvIVGS~ 242 (251)
..|+|++++.|+. |+.. +. +.++.+++.+ ++||++|-|- +. +.++ .+.+ |||+.+-+-
T Consensus 33 ~~Gv~gl~~~Gtt-GE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~Gvg~~~t~~ai~la~~a~~~Gadavlv~~P 105 (291)
T 3a5f_A 33 KSKTDAIIVCGTT-GEATTMTETERKETIKFVIDKVNKRIPVIAGTGSNNTAASIAMSKWAESIGVDGLLVITP 105 (291)
T ss_dssp HTTCCEEEESSGG-GTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HcCCCEEEECccc-cChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 3699999998873 4432 21 3355555554 5999999998 44 3333 2222 999988653
No 338
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=76.64 E-value=20 Score=31.22 Aligned_cols=170 Identities=13% Similarity=0.161 Sum_probs=76.1
Q ss_pred CCCcCCCCccEEEEeecCC-CCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeCChHHHHHHH---HHcCccc
Q psy9039 43 PPSVPVGVQHGVIVENMHD-VPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQILSGCNKAALATA---QAAGLDF 118 (251)
Q Consensus 43 ~~l~~~Gv~D~i~ieN~~~-~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~~~~~~ia---~a~g~~F 118 (251)
+-|++.|+ |||.+-=-.| .|.- .-.+..+-+..+++.++. . +|+.+.+-.|....+...+ ...|++.
T Consensus 40 ~~li~~Gv-~gl~v~GtTGE~~~L----s~eEr~~v~~~~~~~~~g--r--vpViaGvg~~~t~~ai~la~~A~~~Gada 110 (301)
T 1xky_A 40 NYLIDNGT-TAIVVGGTTGESPTL----TSEEKVALYRHVVSVVDK--R--VPVIAGTGSNNTHASIDLTKKATEVGVDA 110 (301)
T ss_dssp HHHHHTTC-CEEEESSTTTTGGGS----CHHHHHHHHHHHHHHHTT--S--SCEEEECCCSCHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHcCC-CEEEECccccChhhC----CHHHHHHHHHHHHHHhCC--C--ceEEeCCCCCCHHHHHHHHHHHHhcCCCE
Confidence 55678899 9998621111 2211 122333333333333332 2 6888887777644444332 3344444
Q ss_pred eecccccccccCCCceeecCcchhHHHHHhcC-CCcchh-hhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCC
Q psy9039 119 IRAESFVFGHMADEGLMNAQAGPLLRYRKQIG-ADNVLV-FTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNA 196 (251)
Q Consensus 119 ir~~~~~~~~~~~~Gli~~da~e~~~~r~~l~-~~~i~i-~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~ 196 (251)
+-.- ..-...+..+++.++.+.+- .-++.+ ++++-...|.. .+.+.+.+.++.-. |.|-+
T Consensus 111 vlv~--------~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~-----l~~~~~~~La~~pn-----IvgiK 172 (301)
T 1xky_A 111 VMLV--------APYYNKPSQEGMYQHFKAIAESTPLPVMLYNVPGRSIVQ-----ISVDTVVRLSEIEN-----IVAIK 172 (301)
T ss_dssp EEEE--------CCCSSCCCHHHHHHHHHHHHHTCSSCEEEEECHHHHSSC-----CCHHHHHHHHTSTT-----EEEEE
T ss_pred EEEc--------CCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCC-----CCHHHHHHHHcCCC-----EEEEE
Confidence 3321 11112233455665555432 112232 33333233433 23344444443211 22222
Q ss_pred CCCCCCHHHHHHHHhcC--CCCEEEecCCChHhHHHhhc-CCEEEEece
Q psy9039 197 TGDPADVSQLMSVKNAV--DLPILIGSGVTSDNVEHYMT-ADALIIGSH 242 (251)
Q Consensus 197 ~g~~~~~~~l~~vr~~~--~~PV~vG~GI~~~~v~~~~~-ADGvIVGS~ 242 (251)
. ...+...+.++++.+ +.-|+.|. ..--+..+.. ++|+|-+++
T Consensus 173 d-ssgd~~~~~~~~~~~~~~f~v~~G~--d~~~l~~l~~G~~G~is~~a 218 (301)
T 1xky_A 173 D-AGGDVLTMTEIIEKTADDFAVYSGD--DGLTLPAMAVGAKGIVSVAS 218 (301)
T ss_dssp E-CSSCHHHHHHHHHHSCTTCEEEESS--GGGHHHHHHTTCCEEEESTH
T ss_pred c-CCCCHHHHHHHHHhcCCCeEEEECc--HHHHHHHHHcCCCEEEcCHH
Confidence 1 112466677766654 35555443 2222333334 999998864
No 339
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=76.54 E-value=3.3 Score=36.03 Aligned_cols=56 Identities=11% Similarity=0.083 Sum_probs=32.0
Q ss_pred hHHHHHHHHHhhCCCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEE
Q psy9039 30 NMTRLCAEIRKVLPPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQI 99 (251)
Q Consensus 30 ~~~~i~~~a~~~a~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~ 99 (251)
+.+++.+.+ +.+.+.|+ |.||+ -+=|-.. +.......++++.+|+.+.+ .|+.+-+
T Consensus 50 ~~~e~~~~~----~~~~~~ga-D~VEl----RvD~l~~----~~~~~~v~~~l~~lr~~~~~-~PiI~T~ 105 (276)
T 3o1n_A 50 TITDVKSEA----LAYREADF-DILEW----RVDHFAN----VTTAESVLEAAGAIREIITD-KPLLFTF 105 (276)
T ss_dssp SHHHHHHHH----HHHTTSCC-SEEEE----EGGGCTT----TTCHHHHHHHHHHHHHHCCS-SCEEEEC
T ss_pred CHHHHHHHH----HHHhhCCC-CEEEE----Eeccccc----cCcHHHHHHHHHHHHHhcCC-CCEEEEE
Confidence 555554333 44445799 99975 3322221 11234467778889988743 5876554
No 340
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=76.46 E-value=2.5 Score=39.53 Aligned_cols=60 Identities=15% Similarity=0.220 Sum_probs=41.9
Q ss_pred HHHhhhccccEEEecCCCCCCCC-CHHHHHHHHhcCCCCEEEecCC-ChHhHHHhhcCCEEEEe
Q psy9039 179 AKAASFFLSDGLIITGNATGDPA-DVSQLMSVKNAVDLPILIGSGV-TSDNVEHYMTADALIIG 240 (251)
Q Consensus 179 a~~a~~~~~D~v~VTG~~~g~~~-~~~~l~~vr~~~~~PV~vG~GI-~~~~v~~~~~ADGvIVG 240 (251)
+......++|.+++.+.. |... -++.++.+++..++|++ +++| +++.+..+..+|++.||
T Consensus 233 a~~l~~~gvd~lvvdta~-G~~~~~L~~I~~l~~~~~vpvi-~k~v~~~~~a~~l~G~d~v~vg 294 (486)
T 2cu0_A 233 AIELDKAGVDVIVVDTAH-AHNLKAIKSMKEMRQKVDADFI-VGNIANPKAVDDLTFADAVKVG 294 (486)
T ss_dssp HHHHHHTTCSEEEEECSC-CCCHHHHHHHHHHHHTCCSEEE-EEEECCHHHHTTCTTSSEEEEC
T ss_pred HHHHHHhcCCceEEEecC-CcEeehhhHHHHHHHHhCCccc-cCCcCCHHHHHHhhCCCeEEEe
Confidence 344444689999888732 3322 24678888888899995 6677 77766655569999985
No 341
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=76.35 E-value=5.9 Score=33.64 Aligned_cols=64 Identities=13% Similarity=0.076 Sum_probs=41.2
Q ss_pred HHHHHHHhhhccccEEEe-cCCCCCCCCCHHHHHH--HHhcCCCCEEEecCC-ChHhHHHhhc--CC--EEE
Q psy9039 175 ITETAKAASFFLSDGLII-TGNATGDPADVSQLMS--VKNAVDLPILIGSGV-TSDNVEHYMT--AD--ALI 238 (251)
Q Consensus 175 i~~~a~~a~~~~~D~v~V-TG~~~g~~~~~~~l~~--vr~~~~~PV~vG~GI-~~~~v~~~~~--AD--GvI 238 (251)
+...++.+...|+|.+=+ ||.......+.+.++. +|+.+.+||-+.||| |.+++.+++. |+ |+-
T Consensus 150 i~~a~ria~eaGADfVKTsTG~~~~~gAt~~dv~l~~m~~~v~v~VKaaGGirt~~~al~~i~aGa~RiG~S 221 (234)
T 1n7k_A 150 LSLLVDSSRRAGADIVKTSTGVYTKGGDPVTVFRLASLAKPLGMGVKASGGIRSGIDAVLAVGAGADIIGTS 221 (234)
T ss_dssp HHHHHHHHHHTTCSEEESCCSSSCCCCSHHHHHHHHHHHGGGTCEEEEESSCCSHHHHHHHHHTTCSEEEET
T ss_pred HHHHHHHHHHhCCCEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEecCCCCHHHHHHHHHcCccccchH
Confidence 333334444579999855 3543212334455555 666666999999999 6888888886 88 543
No 342
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=76.22 E-value=4.1 Score=36.86 Aligned_cols=90 Identities=17% Similarity=0.145 Sum_probs=55.6
Q ss_pred cchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCCCCCCCCHHHHHHHHhcCCCCEE
Q psy9039 139 AGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNATGDPADVSQLMSVKNAVDLPIL 218 (251)
Q Consensus 139 a~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~g~~~~~~~l~~vr~~~~~PV~ 218 (251)
.+-+...|+.+|. ++.+.-|.+- + .+.....+.++..+.++++.+- ..-.+.+.+.++++|+.+++||+
T Consensus 194 ~e~v~avR~avg~-d~~l~vDan~--~----~~~~~a~~~~~~l~~~~i~~iE----~P~~~~~~~~~~~l~~~~~iPIa 262 (393)
T 2og9_A 194 IARVTAVRKHLGD-AVPLMVDANQ--Q----WDRPTAQRMCRIFEPFNLVWIE----EPLDAYDHEGHAALALQFDTPIA 262 (393)
T ss_dssp HHHHHHHHHHHCT-TSCEEEECTT--C----CCHHHHHHHHHHHGGGCCSCEE----CCSCTTCHHHHHHHHHHCSSCEE
T ss_pred HHHHHHHHHHcCC-CCEEEEECCC--C----CCHHHHHHHHHHHHhhCCCEEE----CCCCcccHHHHHHHHHhCCCCEE
Confidence 3444556777764 5555544331 1 1112223344444446777652 11112357888999999999999
Q ss_pred EecCC-ChHhHHHhhc---CCEEEE
Q psy9039 219 IGSGV-TSDNVEHYMT---ADALII 239 (251)
Q Consensus 219 vG~GI-~~~~v~~~~~---ADGvIV 239 (251)
.+..+ +++++.+++. +|.+.+
T Consensus 263 ~dE~~~~~~~~~~~i~~~~~d~v~i 287 (393)
T 2og9_A 263 TGEMLTSAAEHGDLIRHRAADYLMP 287 (393)
T ss_dssp ECTTCCSHHHHHHHHHTTCCSEECC
T ss_pred eCCCcCCHHHHHHHHHCCCCCEEee
Confidence 99999 6899998873 888765
No 343
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=76.18 E-value=4.9 Score=35.39 Aligned_cols=57 Identities=14% Similarity=0.246 Sum_probs=36.5
Q ss_pred hccccEEEecCCCCCCCC--CH----HHHHHHHhcC-CCCEEEecCC-ChHh-HH---Hhhc--CCEEEEec
Q psy9039 184 FFLSDGLIITGNATGDPA--DV----SQLMSVKNAV-DLPILIGSGV-TSDN-VE---HYMT--ADALIIGS 241 (251)
Q Consensus 184 ~~~~D~v~VTG~~~g~~~--~~----~~l~~vr~~~-~~PV~vG~GI-~~~~-v~---~~~~--ADGvIVGS 241 (251)
..|+|++++.|+. |+.. +. +.++.+.+.+ ++||++|-|- +.++ ++ .+.+ |||+.+-+
T Consensus 40 ~~Gv~Gl~v~GtT-GE~~~Lt~~Er~~v~~~~v~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~ 110 (313)
T 3dz1_A 40 EVGCEGVTVLGIL-GEAPKLDAAEAEAVATRFIKRAKSMQVIVGVSAPGFAAMRRLARLSMDAGAAGVMIAP 110 (313)
T ss_dssp HTTCSEEEESTGG-GTGGGSCHHHHHHHHHHHHHHCTTSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEECC
T ss_pred HCCCCEEEeCccC-cChhhCCHHHHHHHHHHHHHHcCCCcEEEecCCCCHHHHHHHHHHHHHcCCCEEEECC
Confidence 3699999998863 4432 21 3355555554 7999999996 5433 33 2223 99998864
No 344
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=75.94 E-value=2.8 Score=38.03 Aligned_cols=39 Identities=13% Similarity=0.346 Sum_probs=33.7
Q ss_pred CHHHHHHHHhcCCCCEEEecCC-ChHhHHHhhc--CCEEEEec
Q psy9039 202 DVSQLMSVKNAVDLPILIGSGV-TSDNVEHYMT--ADALIIGS 241 (251)
Q Consensus 202 ~~~~l~~vr~~~~~PV~vG~GI-~~~~v~~~~~--ADGvIVGS 241 (251)
..+.++++|+.+++||++++ + +++.+..+.+ +|+++|+.
T Consensus 213 ~~~~i~~i~~~~~~Pv~vkg-v~t~e~a~~a~~aGad~I~vs~ 254 (380)
T 1p4c_A 213 NWEALRWLRDLWPHKLLVKG-LLSAEDADRCIAEGADGVILSN 254 (380)
T ss_dssp CHHHHHHHHHHCCSEEEEEE-ECCHHHHHHHHHTTCSEEEECC
T ss_pred cHHHHHHHHHhcCCCEEEEe-cCcHHHHHHHHHcCCCEEEEcC
Confidence 46889999999999999984 6 7898888886 99999954
No 345
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=75.93 E-value=0.71 Score=42.77 Aligned_cols=78 Identities=15% Similarity=0.138 Sum_probs=47.3
Q ss_pred CCCcCCCCccEEEEeecCCCC-----cc--ccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeCChHHHHHHHHHcC
Q psy9039 43 PPSVPVGVQHGVIVENMHDVP-----YV--LEAESGPEITANMTRLCAEIRKVLPPSVPVGVQILSGCNKAALATAQAAG 115 (251)
Q Consensus 43 ~~l~~~Gv~D~i~ieN~~~~P-----f~--~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~~~~~~ia~a~g 115 (251)
+.++++|+ |+|.+.|-...= +. ..--.|+.+.....++++++++.++..+|+..+.=...+..++.. ...|
T Consensus 290 ~~a~~aGa-DgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~v~~~iPIIg~GGI~s~eDa~e~-l~aG 367 (415)
T 3i65_A 290 DVLLETNI-DGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIASGGIFSGLDALEK-IEAG 367 (415)
T ss_dssp HHHHHHTC-SEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEECSSCCSHHHHHHH-HHHT
T ss_pred HHHHHcCC-cEEEEeCCCcccccccccccccCCcCCccchHHHHHHHHHHHHHhCCCCCEEEECCCCCHHHHHHH-HHcC
Confidence 55678999 999999965310 00 000135555555667888999887322687666444443333333 4478
Q ss_pred ccceecc
Q psy9039 116 LDFIRAE 122 (251)
Q Consensus 116 ~~Fir~~ 122 (251)
++++.+.
T Consensus 368 Ad~VqIg 374 (415)
T 3i65_A 368 ASVCQLY 374 (415)
T ss_dssp EEEEEES
T ss_pred CCEEEEc
Confidence 8888863
No 346
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=75.75 E-value=4.4 Score=35.91 Aligned_cols=150 Identities=13% Similarity=0.090 Sum_probs=0.0
Q ss_pred HHHHhhCCCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEE-EE----eeCChHHHHHH
Q psy9039 36 AEIRKVLPPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGV-QI----LSGCNKAALAT 110 (251)
Q Consensus 36 ~~a~~~a~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gv-n~----~~N~~~~~~~i 110 (251)
+.+++.++.+++.|+ |.|-|-.+-.-|-..+ ..+.-... .++++++.++ +|+.+ .+ +. ...+..
T Consensus 74 ~~~~~~A~~~v~~GA-diIDIg~~StrP~~~~--vs~eee~~---vV~~v~~~~~--vplsI~DT~~~~~~---~~V~ea 142 (310)
T 2h9a_B 74 NDPVAWAKKCVEYGA-DIVALRLVSAHPDGQN--RSGAELAE---VCKAVADAID--VPLMIIGCGVEEKD---AEIFPV 142 (310)
T ss_dssp TCHHHHHHHHHHTTC-SEEEEECGGGCTTTTC--CCHHHHHH---HHHHHHHHCS--SCEEEECCSCHHHH---HHHHHH
T ss_pred HHHHHHHHHHHHcCC-cEEEEeCccCCCCCCC--CCHHHHHH---HHHHHHHhCC--ceEEEECCCCCCCC---HHHHHH
Q ss_pred HHHcCcc---ceecccccccccCCCceeecCcchhHHHHHhcCCCcchhhh-hhHhhccCCCCCCcccHHHHHHHhhhcc
Q psy9039 111 AQAAGLD---FIRAESFVFGHMADEGLMNAQAGPLLRYRKQIGADNVLVFT-DIKKKHSSHAITADVDITETAKAASFFL 186 (251)
Q Consensus 111 a~a~g~~---Fir~~~~~~~~~~~~Gli~~da~e~~~~r~~l~~~~i~i~a-~v~~k~~~~~~~~~~~i~~~a~~a~~~~ 186 (251)
|...|++ .+-. ..|. +..++.+...++++.-+-+=. |+. -+.+..+.+..+|
T Consensus 143 al~aga~~k~iINd---------vs~~---~~~~~~~~aa~~g~~vv~m~~~dv~------------~l~~~~~~a~~~G 198 (310)
T 2h9a_B 143 IGEALSGRNCLLSS---------ATKD---NYKPIVATCMVHGHSVVASAPLDIN------------LSKQLNIMIMEMN 198 (310)
T ss_dssp HHHHTTTSCCEEEE---------ECTT---THHHHHHHHHHHTCEEEEECSSCHH------------HHHHHHHHHHTTT
T ss_pred HHHhCCCCCCEEEE---------CCCC---ccHHHHHHHHHhCCCEEEEChhHHH------------HHHHHHHHHHHCC
Q ss_pred c--cEEEe---cCC-CCCCCCCHHHHHHHHh-------cCCCCEEEe
Q psy9039 187 S--DGLII---TGN-ATGDPADVSQLMSVKN-------AVDLPILIG 220 (251)
Q Consensus 187 ~--D~v~V---TG~-~~g~~~~~~~l~~vr~-------~~~~PV~vG 220 (251)
+ +-+++ +|. .++.....+.+..+|. ....|+++|
T Consensus 199 i~~e~IilDPg~g~~g~~~e~~~~~l~~ir~~al~~~~~lg~P~l~g 245 (310)
T 2h9a_B 199 LAPNRIIMDPLIGALGYGIEYSYSIIERMRLGALTGDKILAMPVVCF 245 (310)
T ss_dssp CCGGGEEEECCCCCTTTTHHHHHHHHHHHHHHHHTTCGGGCSCBEEC
T ss_pred CChhhEEEeCCCccccCchHhHHHHHHHHHHhhhhhhhcCCCCEEEE
No 347
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=75.71 E-value=5.6 Score=35.98 Aligned_cols=57 Identities=14% Similarity=0.223 Sum_probs=36.2
Q ss_pred hccccEEEecCCCCCCCC--CH----HHHHHHHhcC--CCCEEEecCC-ChHh-HH---Hhhc--CCEEEEec
Q psy9039 184 FFLSDGLIITGNATGDPA--DV----SQLMSVKNAV--DLPILIGSGV-TSDN-VE---HYMT--ADALIIGS 241 (251)
Q Consensus 184 ~~~~D~v~VTG~~~g~~~--~~----~~l~~vr~~~--~~PV~vG~GI-~~~~-v~---~~~~--ADGvIVGS 241 (251)
..|+|++++.|+ ||+.. +. +.++.+.+.+ .+||++|-|- +.++ ++ .+.+ |||+.+-+
T Consensus 91 ~~Gv~Gl~v~GT-TGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlvv~ 162 (360)
T 4dpp_A 91 QNGAEGVIVGGT-TGEGQLMSWDEHIMLIGHTVNCFGGSIKVIGNTGSNSTREAIHATEQGFAVGMHAALHIN 162 (360)
T ss_dssp HTTCCEEEESST-TTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred HcCCCEEEeccc-ccChhhCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcC
Confidence 369999999887 45432 22 2344555544 5899999997 4433 33 2222 99998865
No 348
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=75.68 E-value=5.3 Score=36.02 Aligned_cols=79 Identities=10% Similarity=0.180 Sum_probs=49.5
Q ss_pred cCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCCCCCCCCHHHHHHHHhcCCCCEEEecCC-ChHh
Q psy9039 149 IGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNATGDPADVSQLMSVKNAVDLPILIGSGV-TSDN 227 (251)
Q Consensus 149 l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~g~~~~~~~l~~vr~~~~~PV~vG~GI-~~~~ 227 (251)
++.+..+.+.+...++|+++.++...... ++....+++|.+=|- + +.-.+..+|+++-+ +.+||++-.|. |-+.
T Consensus 88 l~~e~~~~L~~~~~~~Gi~~~st~~d~~s-vd~l~~~~v~~~KI~-S--~~~~n~~LL~~va~-~gkPviLstGmat~~E 162 (349)
T 2wqp_A 88 LNEEDEIKLKEYVESKGMIFISTLFSRAA-ALRLQRMDIPAYKIG-S--GECNNYPLIKLVAS-FGKPIILSTGMNSIES 162 (349)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEECSHHH-HHHHHHHTCSCEEEC-G--GGTTCHHHHHHHHT-TCSCEEEECTTCCHHH
T ss_pred CCHHHHHHHHHHHHHhCCeEEEeeCCHHH-HHHHHhcCCCEEEEC-c--ccccCHHHHHHHHh-cCCeEEEECCCCCHHH
Confidence 34466677777777778776444444333 233344678887442 1 23446788887755 68999999999 6666
Q ss_pred HHHhh
Q psy9039 228 VEHYM 232 (251)
Q Consensus 228 v~~~~ 232 (251)
+....
T Consensus 163 i~~Av 167 (349)
T 2wqp_A 163 IKKSV 167 (349)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 54443
No 349
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=75.61 E-value=11 Score=30.95 Aligned_cols=63 Identities=19% Similarity=0.221 Sum_probs=46.4
Q ss_pred cHHHHHHHhhhccccEEEecCCCCCCCCCHHHHHHHHhcCCCCEEE-------ecC--CC--hHhHHHhhc--CCEEEEe
Q psy9039 174 DITETAKAASFFLSDGLIITGNATGDPADVSQLMSVKNAVDLPILI-------GSG--VT--SDNVEHYMT--ADALIIG 240 (251)
Q Consensus 174 ~i~~~a~~a~~~~~D~v~VTG~~~g~~~~~~~l~~vr~~~~~PV~v-------G~G--I~--~~~v~~~~~--ADGvIVG 240 (251)
.+.++++.+...|++++.+. ..+.++++|+.+++|++- +.+ ++ .+++..++. ||.+.++
T Consensus 37 ~~~~~a~~~~~~G~~~i~~~--------~~~~i~~i~~~~~~p~i~~~~~~~~~~~~~i~~~~~~i~~~~~~Gad~V~l~ 108 (234)
T 1yxy_A 37 IMPLMAKAAQEAGAVGIRAN--------SVRDIKEIQAITDLPIIGIIKKDYPPQEPFITATMTEVDQLAALNIAVIAMD 108 (234)
T ss_dssp SHHHHHHHHHHHTCSEEEEE--------SHHHHHHHHTTCCSCEEEECBCCCTTSCCCBSCSHHHHHHHHTTTCSEEEEE
T ss_pred hHHHHHHHHHHCCCcEeecC--------CHHHHHHHHHhCCCCEEeeEcCCCCccccccCChHHHHHHHHHcCCCEEEEc
Confidence 56777777777799998774 356799999999999852 122 22 367888876 9999998
Q ss_pred ceEe
Q psy9039 241 SHFK 244 (251)
Q Consensus 241 S~~~ 244 (251)
+...
T Consensus 109 ~~~~ 112 (234)
T 1yxy_A 109 CTKR 112 (234)
T ss_dssp CCSS
T ss_pred cccc
Confidence 7654
No 350
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=75.55 E-value=4.1 Score=35.98 Aligned_cols=58 Identities=16% Similarity=0.135 Sum_probs=36.9
Q ss_pred hccccEEEecCCCCCCCC--CH----HHHHHHHhcC--CCCEEEecCC-Ch-HhHH---Hhhc--CCEEEEece
Q psy9039 184 FFLSDGLIITGNATGDPA--DV----SQLMSVKNAV--DLPILIGSGV-TS-DNVE---HYMT--ADALIIGSH 242 (251)
Q Consensus 184 ~~~~D~v~VTG~~~g~~~--~~----~~l~~vr~~~--~~PV~vG~GI-~~-~~v~---~~~~--ADGvIVGS~ 242 (251)
..|+|++++.|+. |+.. +. +.++.+++.+ ++||++|-|- +. +.++ .+.+ ||++.+-+-
T Consensus 56 ~~Gv~Gi~v~GtT-GE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 128 (315)
T 3na8_A 56 DGGVHAIAPLGST-GEGAYLSDPEWDEVVDFTLKTVAHRVPTIVSVSDLTTAKTVRRAQFAESLGAEAVMVLPI 128 (315)
T ss_dssp HTTCSEEECSSGG-GTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEECCC
T ss_pred HcCCCEEEECccc-cChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 3699999998873 4432 22 3455555554 6999999996 44 3333 2223 999988753
No 351
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=75.49 E-value=3.6 Score=36.32 Aligned_cols=58 Identities=19% Similarity=0.187 Sum_probs=36.6
Q ss_pred hccccEEEecCCCCCCCC--CH----HHHHHHHhcC--CCCEEEecCCCh-HhHH---Hhhc--CCEEEEece
Q psy9039 184 FFLSDGLIITGNATGDPA--DV----SQLMSVKNAV--DLPILIGSGVTS-DNVE---HYMT--ADALIIGSH 242 (251)
Q Consensus 184 ~~~~D~v~VTG~~~g~~~--~~----~~l~~vr~~~--~~PV~vG~GI~~-~~v~---~~~~--ADGvIVGS~ 242 (251)
..|+|++++.|+. |+.. +. +.++.+++.+ .+||++|-|-+. +.++ .+.+ |||+.+-+-
T Consensus 44 ~~Gv~Gl~v~GtT-GE~~~Ls~eEr~~v~~~~v~~~~grvpViaGvg~~t~~ai~la~~A~~~Gadavlv~~P 115 (316)
T 3e96_A 44 DNGIDVIVPCGNT-SEFYALSLEEAKEEVRRTVEYVHGRALVVAGIGYATSTAIELGNAAKAAGADAVMIHMP 115 (316)
T ss_dssp TTTCCEECTTSGG-GTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECSSHHHHHHHHHHHHHHTCSEEEECCC
T ss_pred HcCCCEEEeCccc-cCcccCCHHHHHHHHHHHHHHhCCCCcEEEEeCcCHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 3699999888863 4432 22 3355555554 599999988643 3333 2223 999998753
No 352
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=75.44 E-value=1.9 Score=40.13 Aligned_cols=78 Identities=15% Similarity=0.155 Sum_probs=47.9
Q ss_pred CCCcCCCCccEEEEeecCCC-----Ccccc--CCCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeCChHHHHHHHHHcC
Q psy9039 43 PPSVPVGVQHGVIVENMHDV-----PYVLE--AESGPEITANMTRLCAEIRKVLPPSVPVGVQILSGCNKAALATAQAAG 115 (251)
Q Consensus 43 ~~l~~~Gv~D~i~ieN~~~~-----Pf~~p--~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~~~~~~ia~a~g 115 (251)
+.+++.|+ |+|.+.|-... ++... .-.|+.......++++++++.++..+|+..+.=...+..+... ...|
T Consensus 318 ~~~~~aGa-DgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~~~iPVIg~GGI~s~~DA~e~-l~aG 395 (443)
T 1tv5_A 318 DVLLETNI-DGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIASGGIFSGLDALEK-IEAG 395 (443)
T ss_dssp HHHHHTTC-SEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTTTCSCEEEESSCCSHHHHHHH-HHTT
T ss_pred HHHHHcCC-CEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHHcCCCCcEEEECCCCCHHHHHHH-HHcC
Confidence 55678899 99999986531 01000 0135555455567889999988322797777555443333333 4578
Q ss_pred ccceecc
Q psy9039 116 LDFIRAE 122 (251)
Q Consensus 116 ~~Fir~~ 122 (251)
++++...
T Consensus 396 Ad~Vqig 402 (443)
T 1tv5_A 396 ASVCQLY 402 (443)
T ss_dssp EEEEEES
T ss_pred CCEEEEc
Confidence 8888863
No 353
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=75.13 E-value=4.2 Score=35.59 Aligned_cols=39 Identities=15% Similarity=0.224 Sum_probs=22.4
Q ss_pred CHHHHHHHHhcC--CCCEEEecCCChHhHHHhhc-CCEEEEece
Q psy9039 202 DVSQLMSVKNAV--DLPILIGSGVTSDNVEHYMT-ADALIIGSH 242 (251)
Q Consensus 202 ~~~~l~~vr~~~--~~PV~vG~GI~~~~v~~~~~-ADGvIVGS~ 242 (251)
+...+.++++.+ +.-|+.|..- --...+.. ++|+|-|++
T Consensus 169 d~~~~~~~~~~~~~~f~v~~G~d~--~~~~~l~~G~~G~is~~a 210 (300)
T 3eb2_A 169 NTGRLLSIINRCGDALQVFSASAH--IPAAVMLIGGVGWMAGPA 210 (300)
T ss_dssp BHHHHHHHHHHHGGGSEEEECTTS--CHHHHHHTTCCEEEEGGG
T ss_pred CHHHHHHHHHHcCCCeEEEeCcHH--HHHHHHhCCCCEEEeChh
Confidence 455666655544 3555554432 22444445 999998865
No 354
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=74.85 E-value=4.4 Score=35.38 Aligned_cols=57 Identities=23% Similarity=0.410 Sum_probs=36.3
Q ss_pred hccccEEEecCCCCCCCC--CH----HHHHHHHhcC--CCCEEEecCC-Ch-HhHH---Hhhc--CCEEEEec
Q psy9039 184 FFLSDGLIITGNATGDPA--DV----SQLMSVKNAV--DLPILIGSGV-TS-DNVE---HYMT--ADALIIGS 241 (251)
Q Consensus 184 ~~~~D~v~VTG~~~g~~~--~~----~~l~~vr~~~--~~PV~vG~GI-~~-~~v~---~~~~--ADGvIVGS 241 (251)
..|+|++++.|+. |+.. +. +.++.+++.+ ++||++|-|- +. +.++ .+.+ |||+.+-+
T Consensus 32 ~~Gv~gi~v~Gtt-GE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~ 103 (297)
T 2rfg_A 32 KHGAHGLVPVGTT-GESPTLTEEEHKRVVALVAEQAQGRVPVIAGAGSNNPVEAVRYAQHAQQAGADAVLCVA 103 (297)
T ss_dssp HTTCSEEECSSGG-GTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHHTCSEEEECC
T ss_pred HcCCCEEEECccc-cchhhCCHHHHHHHHHHHHHHhCCCCeEEEccCCCCHHHHHHHHHHHHhcCCCEEEEcC
Confidence 3699999888873 4432 22 3355555544 5999999998 44 3333 2223 99998865
No 355
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=74.60 E-value=6 Score=34.56 Aligned_cols=66 Identities=17% Similarity=0.218 Sum_probs=39.7
Q ss_pred HHHHHHHhhhccccEEEecCCCCCCCC--CH----HHHHHHHhcC---CCCEEEecCC-Ch-HhHH---Hhhc--CCEEE
Q psy9039 175 ITETAKAASFFLSDGLIITGNATGDPA--DV----SQLMSVKNAV---DLPILIGSGV-TS-DNVE---HYMT--ADALI 238 (251)
Q Consensus 175 i~~~a~~a~~~~~D~v~VTG~~~g~~~--~~----~~l~~vr~~~---~~PV~vG~GI-~~-~~v~---~~~~--ADGvI 238 (251)
+++..+.....|+|++++.|+. |+.. +. +.++.+++.+ ++||++|-|- +. +.++ .+.+ |||+.
T Consensus 30 l~~lv~~li~~Gv~gl~v~Gtt-GE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGvg~~~t~~ai~la~~a~~~Gadavl 108 (301)
T 3m5v_A 30 YARLIKRQIENGIDAVVPVGTT-GESATLTHEEHRTCIEIAVETCKGTKVKVLAGAGSNATHEAVGLAKFAKEHGADGIL 108 (301)
T ss_dssp HHHHHHHHHHTTCCEEECSSTT-TTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEECCCSSHHHHHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHHcCCCEEEECccc-cChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEE
Confidence 3333333334699999998874 5432 22 3355555543 5899999997 44 3333 2222 99998
Q ss_pred Eec
Q psy9039 239 IGS 241 (251)
Q Consensus 239 VGS 241 (251)
+-+
T Consensus 109 v~~ 111 (301)
T 3m5v_A 109 SVA 111 (301)
T ss_dssp EEC
T ss_pred EcC
Confidence 875
No 356
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=74.54 E-value=4.4 Score=37.15 Aligned_cols=89 Identities=11% Similarity=-0.036 Sum_probs=56.5
Q ss_pred cchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCCCCCC-CCHHHHHHHHhcCCCCE
Q psy9039 139 AGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNATGDP-ADVSQLMSVKNAVDLPI 217 (251)
Q Consensus 139 a~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~g~~-~~~~~l~~vr~~~~~PV 217 (251)
.+.+...|+.+|. ++.+.-|.+-. + +.....+.++..+.++++.+- ...+ .+.+.++++|+.+++||
T Consensus 217 ie~v~avReavG~-d~~L~vDaN~~----~--~~~~Ai~~~~~Le~~~i~~iE-----eP~~~~d~~~~~~l~~~~~iPI 284 (412)
T 3stp_A 217 LKRVEAVREVIGY-DNDLMLECYMG----W--NLDYAKRMLPKLAPYEPRWLE-----EPVIADDVAGYAELNAMNIVPI 284 (412)
T ss_dssp HHHHHHHHHHHCS-SSEEEEECTTC----S--CHHHHHHHHHHHGGGCCSEEE-----CCSCTTCHHHHHHHHHTCSSCE
T ss_pred HHHHHHHHHHcCC-CCeEEEECCCC----C--CHHHHHHHHHHHHhcCCCEEE-----CCCCcccHHHHHHHHhCCCCCE
Confidence 3445566777774 66665454311 1 112222334444446777752 1122 25788999999999999
Q ss_pred EEecCC-ChHhHHHhhc---CCEEEE
Q psy9039 218 LIGSGV-TSDNVEHYMT---ADALII 239 (251)
Q Consensus 218 ~vG~GI-~~~~v~~~~~---ADGvIV 239 (251)
+.+--+ ++++++++++ +|.+.+
T Consensus 285 a~dE~~~~~~~~~~li~~~a~D~v~i 310 (412)
T 3stp_A 285 SGGEHEFSVIGCAELINRKAVSVLQY 310 (412)
T ss_dssp EECTTCCSHHHHHHHHHTTCCSEECC
T ss_pred EeCCCCCCHHHHHHHHHcCCCCEEec
Confidence 999999 6899998883 888764
No 357
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=74.37 E-value=14 Score=31.93 Aligned_cols=170 Identities=15% Similarity=0.140 Sum_probs=75.5
Q ss_pred CCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeCChHHHHHH---HHHcCccce
Q psy9039 43 PPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQILSGCNKAALAT---AQAAGLDFI 119 (251)
Q Consensus 43 ~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~~~~~~i---a~a~g~~Fi 119 (251)
+-|++.|+ |||.+-=-.|=-++. .-.+.. ++++.+.+.....+|+.+.+-.|....+... |...|++.+
T Consensus 29 ~~li~~Gv-~gl~~~GttGE~~~L---s~~Er~----~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadav 100 (291)
T 3tak_A 29 EWHIEQGT-NSIVAVGTTGEASTL---SMEEHT----QVIKEIIRVANKRIPIIAGTGANSTREAIELTKAAKDLGADAA 100 (291)
T ss_dssp HHHHHHTC-CEEEESSTTTTGGGS---CHHHHH----HHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHHTCSEE
T ss_pred HHHHHCCC-CEEEECccccccccC---CHHHHH----HHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHhcCCCEE
Confidence 55678999 999862111111111 122332 3333433332222688887777664444433 233444433
Q ss_pred ecccccccccCCCceeecCcchhHHHHHhcCC-Ccchh-hhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCCC
Q psy9039 120 RAESFVFGHMADEGLMNAQAGPLLRYRKQIGA-DNVLV-FTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNAT 197 (251)
Q Consensus 120 r~~~~~~~~~~~~Gli~~da~e~~~~r~~l~~-~~i~i-~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~ 197 (251)
-.- ..-...+..+++.++.+.+-. -++.+ ++++-...|.. .+.+.+.+.++.-.+- |-+.
T Consensus 101 lv~--------~P~y~~~~~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~-----l~~~~~~~La~~pniv-----giK~ 162 (291)
T 3tak_A 101 LLV--------TPYYNKPTQEGLYQHYKAIAEAVELPLILYNVPGRTGVD-----LSNDTAVRLAEIPNIV-----GIKD 162 (291)
T ss_dssp EEE--------CCCSSCCCHHHHHHHHHHHHHHCCSCEEEEECHHHHSCC-----CCHHHHHHHTTSTTEE-----EEEE
T ss_pred EEc--------CCCCCCCCHHHHHHHHHHHHHhcCCCEEEEecccccCCC-----CCHHHHHHHHcCCCEE-----EEEe
Confidence 321 111112234455555444311 12222 33332233433 2444444444321222 2221
Q ss_pred CCCCCHHHHHHHHhcC--CCCEEEecCCChHhHHHhh-c-CCEEEEece
Q psy9039 198 GDPADVSQLMSVKNAV--DLPILIGSGVTSDNVEHYM-T-ADALIIGSH 242 (251)
Q Consensus 198 g~~~~~~~l~~vr~~~--~~PV~vG~GI~~~~v~~~~-~-ADGvIVGS~ 242 (251)
...+...+.++++.. +.-|+.|. .+..-..+ . ++|+|-+++
T Consensus 163 -ssgd~~~~~~~~~~~~~~f~v~~G~---d~~~~~~l~~G~~G~is~~~ 207 (291)
T 3tak_A 163 -ATGDVPRGKALIDALNGKMAVYSGD---DETAWELMLLGADGNISVTA 207 (291)
T ss_dssp -CSCCHHHHHHHHHHHTTSSEEEECC---HHHHHHHHHTTCCEEEESGG
T ss_pred -CCCCHHHHHHHHHHcCCCeEEEECc---HHHHHHHHHCCCCEEEechh
Confidence 123466666666544 45555543 23333434 4 999998765
No 358
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=73.91 E-value=4.6 Score=35.11 Aligned_cols=66 Identities=20% Similarity=0.299 Sum_probs=39.5
Q ss_pred HHHHHHhhhccccEEEecCCCCCCCC--CH----HHHHHHHhcC--CCCEEEecCC-Ch-HhHH---Hhhc--CCEEEEe
Q psy9039 176 TETAKAASFFLSDGLIITGNATGDPA--DV----SQLMSVKNAV--DLPILIGSGV-TS-DNVE---HYMT--ADALIIG 240 (251)
Q Consensus 176 ~~~a~~a~~~~~D~v~VTG~~~g~~~--~~----~~l~~vr~~~--~~PV~vG~GI-~~-~~v~---~~~~--ADGvIVG 240 (251)
++.++.....|+|++++.|+. |+.. +. +.++.+++.+ ++||++|-|- +. +.++ .+.+ |||+.+-
T Consensus 24 ~~lv~~li~~Gv~gl~~~Gtt-GE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~ 102 (292)
T 2vc6_A 24 HDLVEWQIEEGSFGLVPCGTT-GESPTLSKSEHEQVVEITIKTANGRVPVIAGAGSNSTAEAIAFVRHAQNAGADGVLIV 102 (292)
T ss_dssp HHHHHHHHHTTCSEEETTSGG-GTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHcCCCEEEECccc-cChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHHcCCCEEEEc
Confidence 333333333699999888873 4432 22 3355555554 5999999998 44 3333 2222 9999886
Q ss_pred ce
Q psy9039 241 SH 242 (251)
Q Consensus 241 S~ 242 (251)
+-
T Consensus 103 ~P 104 (292)
T 2vc6_A 103 SP 104 (292)
T ss_dssp CC
T ss_pred CC
Confidence 53
No 359
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=73.91 E-value=6.5 Score=34.59 Aligned_cols=188 Identities=13% Similarity=0.094 Sum_probs=87.5
Q ss_pred ccccccCCCCCCCcchHHHHHHHHHhhCCCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCcc
Q psy9039 15 VPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVP 94 (251)
Q Consensus 15 ~p~~~~~pG~P~~~~~~~~i~~~a~~~a~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P 94 (251)
-||-.. |+-+++...+.+ +-|+++|+ |||.+-=-.|=-++ .+.+--.++++.+.+.....+|
T Consensus 17 TPf~~d--g~iD~~~l~~lv--------~~li~~Gv-~Gl~v~GtTGE~~~-------Ls~~Er~~v~~~~~~~~~grvp 78 (311)
T 3h5d_A 17 TPFHED--GSINFDAIPALI--------EHLLAHHT-DGILLAGTTAESPT-------LTHDEELELFAAVQKVVNGRVP 78 (311)
T ss_dssp CCBCTT--SSBCTTHHHHHH--------HHHHHTTC-CCEEESSTTTTGGG-------SCHHHHHHHHHHHHHHSCSSSC
T ss_pred cCCCCC--CCcCHHHHHHHH--------HHHHHcCC-CEEEECccccChhh-------CCHHHHHHHHHHHHHHhCCCCc
Confidence 355434 555555444444 56778999 99986211111111 1222233455555555433368
Q ss_pred EEEEEeeCChHHHHHHHHH---cCc-cceecccccccccCCCceeecCcchhHHHHHhcC-CCcchh-hhhhHhhccCCC
Q psy9039 95 VGVQILSGCNKAALATAQA---AGL-DFIRAESFVFGHMADEGLMNAQAGPLLRYRKQIG-ADNVLV-FTDIKKKHSSHA 168 (251)
Q Consensus 95 ~Gvn~~~N~~~~~~~ia~a---~g~-~Fir~~~~~~~~~~~~Gli~~da~e~~~~r~~l~-~~~i~i-~a~v~~k~~~~~ 168 (251)
+.+.+-.|....+...+.. .|+ +.+-. ...-...+..+++.++.+.+- .-++.+ ++++-...|..
T Consensus 79 ViaGvg~~~t~~ai~la~~A~~~Ga~davlv--------~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~- 149 (311)
T 3h5d_A 79 LIAGVGTNDTRDSIEFVKEVAEFGGFAAGLA--------IVPYYNKPSQEGMYQHFKAIADASDLPIIIYNIPGRVVVE- 149 (311)
T ss_dssp EEEECCCSSHHHHHHHHHHHHHSCCCSEEEE--------ECCCSSCCCHHHHHHHHHHHHHSCSSCEEEEECHHHHSSC-
T ss_pred EEEeCCCcCHHHHHHHHHHHHhcCCCcEEEE--------cCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEecccccCCC-
Confidence 8888777764444444322 232 32221 011112233455665555442 112333 33332233443
Q ss_pred CCCcccHHHHHHHhhhccccEEEecCCCCCCCCCHHHHHHHHhcCC--CCEEEecCCChHhHHHhhc-CCEEEEece
Q psy9039 169 ITADVDITETAKAASFFLSDGLIITGNATGDPADVSQLMSVKNAVD--LPILIGSGVTSDNVEHYMT-ADALIIGSH 242 (251)
Q Consensus 169 ~~~~~~i~~~a~~a~~~~~D~v~VTG~~~g~~~~~~~l~~vr~~~~--~PV~vG~GI~~~~v~~~~~-ADGvIVGS~ 242 (251)
.+.+.+.+.++.-. |.|-+... +...+.++++..+ .-|+.| -..--+..+.. ++|+|-|++
T Consensus 150 ----l~~~~~~~La~~pn-----IvgiKdss--d~~~~~~~~~~~~~~f~v~~G--~d~~~l~~l~~Ga~G~is~~a 213 (311)
T 3h5d_A 150 ----LTPETMLRLADHPN-----IIGVKECT--SLANMAYLIEHKPEEFLIYTG--EDGDAFHAMNLGADGVISVAS 213 (311)
T ss_dssp ----CCHHHHHHHHTSTT-----EEEEEECS--CHHHHHHHHHHCCSSCEEEEC--CGGGHHHHHHHTCCEEEESTH
T ss_pred ----CCHHHHHHHhcCCC-----EEEEEeCC--CHHHHHHHHHHcCCCEEEEEC--cHHHHHHHHHcCCCEEEechh
Confidence 23344444443211 22333222 5777777766553 445544 33223333434 999998864
No 360
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=73.90 E-value=2 Score=39.00 Aligned_cols=78 Identities=22% Similarity=0.209 Sum_probs=48.1
Q ss_pred CCCcCCCCccEEEEeecC-CCCccc--------cCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeCChHHHHHHHHH
Q psy9039 43 PPSVPVGVQHGVIVENMH-DVPYVL--------EAESGPEITANMTRLCAEIRKVLPPSVPVGVQILSGCNKAALATAQA 113 (251)
Q Consensus 43 ~~l~~~Gv~D~i~ieN~~-~~Pf~~--------p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~~~~~~ia~a 113 (251)
+.++++|+ |+|.+.|-. +.+... .--.|+.+.....+.++++++.++..+|+..+.=...+..+... ..
T Consensus 241 ~~~~~aGa-dgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v~~~ipvI~~GGI~s~~da~~~-l~ 318 (367)
T 3zwt_A 241 SVVKELGI-DGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVSSGQDALEK-IR 318 (367)
T ss_dssp HHHHHHTC-CEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEEESSCCSHHHHHHH-HH
T ss_pred HHHHHcCC-CEEEEeCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHHcCCCceEEEECCCCCHHHHHHH-HH
Confidence 45678999 999998865 332111 00134545445568889999988322798777655443333333 44
Q ss_pred cCccceecc
Q psy9039 114 AGLDFIRAE 122 (251)
Q Consensus 114 ~g~~Fir~~ 122 (251)
.|++++.+.
T Consensus 319 ~GAd~V~vg 327 (367)
T 3zwt_A 319 AGASLVQLY 327 (367)
T ss_dssp HTCSEEEES
T ss_pred cCCCEEEEC
Confidence 788888863
No 361
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=73.85 E-value=38 Score=29.44 Aligned_cols=60 Identities=10% Similarity=0.057 Sum_probs=31.8
Q ss_pred CCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeCChHHHHHH
Q psy9039 43 PPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQILSGCNKAALAT 110 (251)
Q Consensus 43 ~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~~~~~~i 110 (251)
+-|++.|+ |||.+ +|. .. ..--.+.+--.++++.+.+.....+|+.+.+-.|....+...
T Consensus 42 ~~li~~Gv-~Gl~v---~Gt---TG-E~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~l 101 (307)
T 3s5o_A 42 HKLGTFPF-RGFVV---QGS---NG-EFPFLTSSERLEVVSRVRQAMPKNRLLLAGSGCESTQATVEM 101 (307)
T ss_dssp HHHTTSCC-SEEEE---SSG---GG-TGGGSCHHHHHHHHHHHHHTSCTTSEEEEECCCSSHHHHHHH
T ss_pred HHHHHcCC-CEEEE---Ccc---cc-chhhCCHHHHHHHHHHHHHHcCCCCcEEEecCCCCHHHHHHH
Confidence 55778999 99986 332 00 000112222334556666554333688777766664444443
No 362
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=73.79 E-value=6.7 Score=34.21 Aligned_cols=167 Identities=16% Similarity=0.157 Sum_probs=74.8
Q ss_pred CCCcCCCCccEEEEeecCCC----CccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeCChHHHHHHH---HHcC
Q psy9039 43 PPSVPVGVQHGVIVENMHDV----PYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQILSGCNKAALATA---QAAG 115 (251)
Q Consensus 43 ~~l~~~Gv~D~i~ieN~~~~----Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~~~~~~ia---~a~g 115 (251)
+-|++.|+ |||.+ +|. |.- .-.+..+-+..+++.++. . +|+.+.+-.|....+...+ ...|
T Consensus 28 ~~li~~Gv-~gi~v---~GttGE~~~L----s~~Er~~v~~~~~~~~~g--r--vpviaGvg~~~t~~ai~la~~A~~~G 95 (297)
T 2rfg_A 28 DWQIKHGA-HGLVP---VGTTGESPTL----TEEEHKRVVALVAEQAQG--R--VPVIAGAGSNNPVEAVRYAQHAQQAG 95 (297)
T ss_dssp HHHHHTTC-SEEEC---SSGGGTGGGS----CHHHHHHHHHHHHHHHTT--S--SCBEEECCCSSHHHHHHHHHHHHHHT
T ss_pred HHHHHcCC-CEEEE---CccccchhhC----CHHHHHHHHHHHHHHhCC--C--CeEEEccCCCCHHHHHHHHHHHHhcC
Confidence 55678999 99975 332 211 122333333333333332 2 6877777776644443333 3345
Q ss_pred ccceecccccccccCCCceeecCcchhHHHHHhcCC-Ccchh-hhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEec
Q psy9039 116 LDFIRAESFVFGHMADEGLMNAQAGPLLRYRKQIGA-DNVLV-FTDIKKKHSSHAITADVDITETAKAASFFLSDGLIIT 193 (251)
Q Consensus 116 ~~Fir~~~~~~~~~~~~Gli~~da~e~~~~r~~l~~-~~i~i-~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VT 193 (251)
++.+-.- ..-...+..+++.++.+.+-. -++.+ ++++-...|.. .+.+.+.+.++.-. |.
T Consensus 96 adavlv~--------~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~-----l~~~~~~~La~~pn-----Iv 157 (297)
T 2rfg_A 96 ADAVLCV--------AGYYNRPSQEGLYQHFKMVHDAIDIPIIVYNIPPRAVVD-----IKPETMARLAALPR-----IV 157 (297)
T ss_dssp CSEEEEC--------CCTTTCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCC-----CCHHHHHHHHTSTT-----EE
T ss_pred CCEEEEc--------CCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCC-----CCHHHHHHHHcCCC-----EE
Confidence 4443321 111112334555555444311 11222 33333333433 23333444443211 22
Q ss_pred CCCCCCCCCHHHHHHHHhcC--CCCEEEecCCChHhHHHhhc-CCEEEEece
Q psy9039 194 GNATGDPADVSQLMSVKNAV--DLPILIGSGVTSDNVEHYMT-ADALIIGSH 242 (251)
Q Consensus 194 G~~~g~~~~~~~l~~vr~~~--~~PV~vG~GI~~~~v~~~~~-ADGvIVGS~ 242 (251)
|-+. ...+...+.++++.+ +..|+.|. ..--+..+.. ++|+|-|++
T Consensus 158 giKd-s~gd~~~~~~~~~~~~~~f~v~~G~--d~~~l~~l~~G~~G~is~~a 206 (297)
T 2rfg_A 158 GVKD-ATTDLARISRERMLINKPFSFLSGD--DMTAIAYNASGGQGCISVSA 206 (297)
T ss_dssp EEEE-CSCCTTHHHHHHTTCCSCCEEEESC--GGGHHHHHHTTCCEEEESGG
T ss_pred EEEe-CCCCHHHHHHHHHhcCCCEEEEeCc--HHHHHHHHHCCCCEEEecHH
Confidence 2211 112345566666654 34555443 2222334444 999998875
No 363
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=73.53 E-value=21 Score=31.00 Aligned_cols=149 Identities=11% Similarity=0.097 Sum_probs=76.0
Q ss_pred CcCCCCccEEEEe-----ecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEee---CChHHHHHHHHHcCc
Q psy9039 45 SVPVGVQHGVIVE-----NMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQILS---GCNKAALATAQAAGL 116 (251)
Q Consensus 45 l~~~Gv~D~i~ie-----N~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~---N~~~~~~~ia~a~g~ 116 (251)
+.++|+ |+|++- +.+|.| + -++++..-|..-++.+++..+. .|+.+.+=. ..+...+.-+ .
T Consensus 45 ~e~aG~-d~ilvGdSl~~~~lG~~--d---t~~vtldem~~h~~aV~r~~~~-~~vvaD~pfgsY~s~~~a~~~a----~ 113 (275)
T 3vav_A 45 LDRANV-DVQLIGDSLGNVLQGQT--T---TLPVTLDDIAYHTACVARAQPR-ALIVADLPFGTYGTPADAFASA----V 113 (275)
T ss_dssp HHHTTC-SEEEECTTHHHHTTCCS--S---STTCCHHHHHHHHHHHHHTCCS-SEEEEECCTTSCSSHHHHHHHH----H
T ss_pred HHHcCC-CEEEECcHHHHHHcCCC--C---CCccCHHHHHHHHHHHHhcCCC-CCEEEecCCCCCCCHHHHHHHH----H
Confidence 478999 999874 223332 2 3678888888888999887753 366665422 1112211111 2
Q ss_pred cceecccccccccCCCceeecCcchhHHHHHhcCCCcchhhhhh--Hhh----c-cCCCC-CCcccHHHHHHHhh---hc
Q psy9039 117 DFIRAESFVFGHMADEGLMNAQAGPLLRYRKQIGADNVLVFTDI--KKK----H-SSHAI-TADVDITETAKAAS---FF 185 (251)
Q Consensus 117 ~Fir~~~~~~~~~~~~Gli~~da~e~~~~r~~l~~~~i~i~a~v--~~k----~-~~~~~-~~~~~i~~~a~~a~---~~ 185 (251)
++++. |.+|+-..|..+..+.-+.+-...|++.+.+ .++ . +.-.. -++.+.+++.+.|. ..
T Consensus 114 rl~ka--------Ga~aVklEdg~~~~~~i~~l~~~GIpv~gHlgltPq~~~~~gg~~vqgrt~~~a~~~i~rA~a~~eA 185 (275)
T 3vav_A 114 KLMRA--------GAQMVKFEGGEWLAETVRFLVERAVPVCAHVGLTPQSVHAFGGFKVQGKTEAGAAQLLRDARAVEEA 185 (275)
T ss_dssp HHHHT--------TCSEEEEECCGGGHHHHHHHHHTTCCEEEEEESCGGGHHHHC---CCCCSHHHHHHHHHHHHHHHHH
T ss_pred HHHHc--------CCCEEEECCchhHHHHHHHHHHCCCCEEEecCCCceEEeccCCeEEEcCCHHHHHHHHHHHHHHHHc
Confidence 33331 2344433333222222222222344443211 111 0 11100 12233455555554 26
Q ss_pred cccEEEecCCCCCCCCCHHHHHHHHhcCCCCEE
Q psy9039 186 LSDGLIITGNATGDPADVSQLMSVKNAVDLPIL 218 (251)
Q Consensus 186 ~~D~v~VTG~~~g~~~~~~~l~~vr~~~~~PV~ 218 (251)
|||++.+-+-. .++.+++.+.+++|++
T Consensus 186 GA~~ivlE~vp------~~~a~~It~~l~iP~i 212 (275)
T 3vav_A 186 GAQLIVLEAVP------TLVAAEVTRELSIPTI 212 (275)
T ss_dssp TCSEEEEESCC------HHHHHHHHHHCSSCEE
T ss_pred CCCEEEecCCC------HHHHHHHHHhCCCCEE
Confidence 99999997653 2367788888899987
No 364
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=73.45 E-value=9.2 Score=33.48 Aligned_cols=51 Identities=25% Similarity=0.470 Sum_probs=37.4
Q ss_pred hhccccEEEec-CCCCCC---CC--CHHHHHHHHhcCCCCEEE--ecCCChHhHHHhhc
Q psy9039 183 SFFLSDGLIIT-GNATGD---PA--DVSQLMSVKNAVDLPILI--GSGVTSDNVEHYMT 233 (251)
Q Consensus 183 ~~~~~D~v~VT-G~~~g~---~~--~~~~l~~vr~~~~~PV~v--G~GI~~~~v~~~~~ 233 (251)
+.-|+|.+-++ |...|. .+ +.++|+++++.+++|+++ |+|+..+++++..+
T Consensus 165 ~~TgvD~LAvaiGt~HG~Y~~~p~Ld~~~L~~I~~~~~vpLVlHGgSG~~~e~i~~ai~ 223 (286)
T 1gvf_A 165 ELTGVDSLAVAIGTAHGLYSKTPKIDFQRLAEIREVVDVPLVLHGASDVPDEFVRRTIE 223 (286)
T ss_dssp HHHCCSEEEECSSCCSSCCSSCCCCCHHHHHHHHHHCCSCEEECCCTTCCHHHHHHHHH
T ss_pred HHHCCCEEEeecCccccCcCCCCccCHHHHHHHHHhcCCCEEEECCCCCCHHHHHHHHH
Confidence 34589999775 443332 22 468999999999999998 55677888988763
No 365
>2dgd_A 223AA long hypothetical arylmalonate decarboxylas; octamer, alpha/beta structure, lyase; 2.90A {Sulfolobus tokodaii}
Probab=73.45 E-value=23 Score=28.94 Aligned_cols=46 Identities=15% Similarity=0.187 Sum_probs=27.7
Q ss_pred ccHHHHHHHhhhc--cccEEEecCCCCCCCCCHHHHHHHHhcCCCCEEEec
Q psy9039 173 VDITETAKAASFF--LSDGLIITGNATGDPADVSQLMSVKNAVDLPILIGS 221 (251)
Q Consensus 173 ~~i~~~a~~a~~~--~~D~v~VTG~~~g~~~~~~~l~~vr~~~~~PV~vG~ 221 (251)
..+.++++..... ++|+++...+.- +. ...+.++.+.+++||+-..
T Consensus 156 ~~~~~~~~~l~~~~~gadaIvLgCT~l--~~-~~~~~~l~~~~g~PVids~ 203 (223)
T 2dgd_A 156 FTIYRLVKRHLNEVLKADAVYIACTAL--ST-YEAVQYLHEDLDMPVVSEN 203 (223)
T ss_dssp HHHHHHHHTTHHHHTTSSEEEECCTTS--CC-TTHHHHHHHHHTSCEEEHH
T ss_pred HHHHHHHHHHhcccCCCCEEEEeCCcc--cH-HHHHHHHHHHhCCCEEEhH
Confidence 3455555555445 899999986643 22 2345555556689987443
No 366
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=73.40 E-value=8.2 Score=34.81 Aligned_cols=90 Identities=18% Similarity=0.228 Sum_probs=55.4
Q ss_pred cchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCCCCCCCCHHHHHHHHhcCCCCEE
Q psy9039 139 AGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNATGDPADVSQLMSVKNAVDLPIL 218 (251)
Q Consensus 139 a~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~g~~~~~~~l~~vr~~~~~PV~ 218 (251)
.+.+...|+.+|. ++.+.-|.+ .+ .+.....+.++..+.++++.+- ..-.+.+.+.++++|+.+++||+
T Consensus 176 ~e~v~avR~a~g~-d~~l~vDan--~~----~~~~~a~~~~~~l~~~~i~~iE----qP~~~~~~~~~~~l~~~~~iPIa 244 (397)
T 2qde_A 176 IAMVAEVRRAVGD-DVDLFIDIN--GA----WTYDQALTTIRALEKYNLSKIE----QPLPAWDLDGMARLRGKVATPIY 244 (397)
T ss_dssp HHHHHHHHHHHCT-TSCEEEECT--TC----CCHHHHHHHHHHHGGGCCSCEE----CCSCTTCHHHHHHHHTTCSSCEE
T ss_pred HHHHHHHHHhhCC-CCEEEEECC--CC----CCHHHHHHHHHHHHhCCCCEEE----CCCChhhHHHHHHHHhhCCCCEE
Confidence 3444556677764 555544432 11 1112222334444446777652 11112357889999999999999
Q ss_pred EecCC-ChHhHHHhhc---CCEEEE
Q psy9039 219 IGSGV-TSDNVEHYMT---ADALII 239 (251)
Q Consensus 219 vG~GI-~~~~v~~~~~---ADGvIV 239 (251)
.+..+ +++.+.++++ +|.+.+
T Consensus 245 ~dE~~~~~~~~~~~i~~~~~d~v~i 269 (397)
T 2qde_A 245 ADESAQELHDLLAIINKGAADGLMI 269 (397)
T ss_dssp ESTTCCSHHHHHHHHHHTCCSEEEE
T ss_pred EeCCcCCHHHHHHHHHcCCCCEEEE
Confidence 99999 7889998883 999876
No 367
>3tml_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.90A {Burkholderia cenocepacia} PDB: 3t4c_A
Probab=72.92 E-value=21 Score=31.25 Aligned_cols=165 Identities=14% Similarity=0.196 Sum_probs=76.6
Q ss_pred CCCcchHHHHHHHHHhhCCCCcCCCCccEEEEeecCCC-CccccC-CCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeC
Q psy9039 25 PEITANMTRLCAEIRKVLPPSVPVGVQHGVIVENMHDV-PYVLEA-ESGPEITANMTRLCAEIRKVLPPSVPVGVQILSG 102 (251)
Q Consensus 25 P~~~~~~~~i~~~a~~~a~~l~~~Gv~D~i~ieN~~~~-Pf~~p~-~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N 102 (251)
|.--.|.+.+++.|.+=.+.-.+.|+ .+++ -++++. |=+.|- -.|+-+.+.+ ++++++++++. +|+.--.+-.
T Consensus 24 PCsie~~~~~~e~A~~lk~~~~~~~~-~~v~-k~~f~KapRTs~~sf~Glg~~~GL-~~L~~~~~e~G--lp~~tev~d~ 98 (288)
T 3tml_A 24 TCVVESEQMTIDTAGRLKEICEKLNV-PFIY-KSSYDKANRSSGKSFRGLGMDEGL-RILSEVKRQLG--LPVLTDVHSI 98 (288)
T ss_dssp CSBCCCHHHHHHHHHHHHHHHHHHTC-CEEE-ECBC--------------CHHHHH-HHHHHHHHHHC--CCEEEECCSG
T ss_pred CCcCCCHHHHHHHHHHHHHHHHHcCC-CEEE-ecccccCCCCCCCCcCCcCHHHHH-HHHHHHHHhcC--CeEEEEeCCH
Confidence 44434556666555544443345578 7774 222322 211110 0122233333 45777777778 7888776542
Q ss_pred ChHHHHHHHHHcCccceecccccccccCCCceeecCcchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHh
Q psy9039 103 CNKAALATAQAAGLDFIRAESFVFGHMADEGLMNAQAGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAA 182 (251)
Q Consensus 103 ~~~~~~~ia~a~g~~Fir~~~~~~~~~~~~Gli~~da~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a 182 (251)
.+....... .+++++.++-. .-.++++...+.+. .|-+ |.|... +...+...++..
T Consensus 99 ---~~v~~l~~~-vd~lkIgA~~~-----------~n~~LLr~~a~~gk-PVil------K~G~~~--t~~e~~~ave~i 154 (288)
T 3tml_A 99 ---DEIEQVASV-VDVLQTPAFLC-----------RQTDFIHACARSGK-PVNI------KKGQFL--APHDMKNVIDKA 154 (288)
T ss_dssp ---GGHHHHHHH-CSEEEECGGGT-----------TCHHHHHHHHTSSS-CEEE------ECCTTC--CTTHHHHHHHHH
T ss_pred ---HHHHHHHHh-CCEEEECcccc-----------cCHHHHHHHHccCC-cEEE------eCCCCC--CHHHHHHHHHHH
Confidence 333333333 67877643211 12234555445543 2222 434321 112233333333
Q ss_pred hhccc------cEEEec--CCCCCCCC---CHHHHHHHHhcCCCCEEE
Q psy9039 183 SFFLS------DGLIIT--GNATGDPA---DVSQLMSVKNAVDLPILI 219 (251)
Q Consensus 183 ~~~~~------D~v~VT--G~~~g~~~---~~~~l~~vr~~~~~PV~v 219 (251)
...|. +-++++ |...+... ++..+..+|+ +.+||+.
T Consensus 155 ~~~Gn~~~~~~~~i~L~erg~~y~~~~~~vdl~~i~~lk~-~~~pV~~ 201 (288)
T 3tml_A 155 RDAAREAGLSEDRFMACERGVSFGYNNLVSDMRSLAIMRE-TNAPVVF 201 (288)
T ss_dssp HHHHHTTTCCSCCEEEEECCEECSSSCEECCHHHHHHGGG-GSSCEEE
T ss_pred HHcCCCccCCCCcEEEEeCCCCCCCCcCcCCHHHHHHHHh-cCCcEEE
Confidence 32344 434443 33223333 6777888888 8999987
No 368
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=72.91 E-value=6.9 Score=32.82 Aligned_cols=65 Identities=20% Similarity=0.108 Sum_probs=45.9
Q ss_pred ccHHHHHHHhhhccccEEEecCCCCCCCCCHHHHHHHHhcCCCCEEEecCC--ChHhHHHhhc--CCEEEEec
Q psy9039 173 VDITETAKAASFFLSDGLIITGNATGDPADVSQLMSVKNAVDLPILIGSGV--TSDNVEHYMT--ADALIIGS 241 (251)
Q Consensus 173 ~~i~~~a~~a~~~~~D~v~VTG~~~g~~~~~~~l~~vr~~~~~PV~vG~GI--~~~~v~~~~~--ADGvIVGS 241 (251)
+...++++.+...|++.+-+|=. + ....+.++++++... .+++|.|. +.+++..++. ||+++.|.
T Consensus 29 ~~~~~~~~al~~gGv~~iel~~k-~--~~~~~~i~~l~~~~~-~l~vgaGtvl~~d~~~~A~~aGAd~v~~p~ 97 (224)
T 1vhc_A 29 DDILPLADTLAKNGLSVAEITFR-S--EAAADAIRLLRANRP-DFLIAAGTVLTAEQVVLAKSSGADFVVTPG 97 (224)
T ss_dssp GGHHHHHHHHHHTTCCEEEEETT-S--TTHHHHHHHHHHHCT-TCEEEEESCCSHHHHHHHHHHTCSEEECSS
T ss_pred HHHHHHHHHHHHcCCCEEEEecc-C--chHHHHHHHHHHhCc-CcEEeeCcEeeHHHHHHHHHCCCCEEEECC
Confidence 44556666666779999988832 1 223567887877763 46666666 6888988886 99998774
No 369
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=72.84 E-value=6 Score=35.24 Aligned_cols=91 Identities=13% Similarity=0.158 Sum_probs=57.7
Q ss_pred CcchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCCCCC-CCCHHHHHHHHhcCCCC
Q psy9039 138 QAGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNATGD-PADVSQLMSVKNAVDLP 216 (251)
Q Consensus 138 da~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~g~-~~~~~~l~~vr~~~~~P 216 (251)
|.+.+...|+.+|. ++.+.-|.+-. + +.....+.++..+.++++.+- ... +.+.+.++++|+.+++|
T Consensus 169 d~~~v~avR~a~g~-~~~l~vDan~~----~--~~~~a~~~~~~L~~~~i~~iE-----qP~~~~d~~~~~~l~~~~~iP 236 (354)
T 3jva_A 169 DIARVKAIREAVGF-DIKLRLDANQA----W--TPKDAVKAIQALADYQIELVE-----QPVKRRDLEGLKYVTSQVNTT 236 (354)
T ss_dssp HHHHHHHHHHHHCT-TSEEEEECTTC----S--CHHHHHHHHHHTTTSCEEEEE-----CCSCTTCHHHHHHHHHHCSSE
T ss_pred HHHHHHHHHHHcCC-CCeEEEECCCC----C--CHHHHHHHHHHHHhcCCCEEE-----CCCChhhHHHHHHHHHhCCCC
Confidence 45556667788874 66665554311 1 112222333444446666652 122 23578889999999999
Q ss_pred EEEecCC-ChHhHHHhhc---CCEEEEe
Q psy9039 217 ILIGSGV-TSDNVEHYMT---ADALIIG 240 (251)
Q Consensus 217 V~vG~GI-~~~~v~~~~~---ADGvIVG 240 (251)
|+.+..+ +++++.++++ +|.+.+-
T Consensus 237 Ia~dE~~~~~~~~~~~l~~~~~d~v~~k 264 (354)
T 3jva_A 237 IMADESCFDAQDALELVKKGTVDVINIK 264 (354)
T ss_dssp EEESTTCCSHHHHHHHHHHTCCSEEEEC
T ss_pred EEEcCCcCCHHHHHHHHHcCCCCEEEEC
Confidence 9999999 6888988873 8988763
No 370
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=72.34 E-value=5.9 Score=35.87 Aligned_cols=89 Identities=13% Similarity=0.130 Sum_probs=55.8
Q ss_pred chhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCCCCCCCCHHHHHHHHhcCCCCEEE
Q psy9039 140 GPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNATGDPADVSQLMSVKNAVDLPILI 219 (251)
Q Consensus 140 ~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~g~~~~~~~l~~vr~~~~~PV~v 219 (251)
+-+...|+.+|. ++.+.-|.+- + + +.....+.++..+.++++.+- ..-.+.+.+.++++|+.+++||+.
T Consensus 206 e~v~avR~a~G~-d~~l~vDan~--~--~--~~~~ai~~~~~l~~~~i~~iE----~P~~~~~~~~~~~l~~~~~iPIa~ 274 (410)
T 2gl5_A 206 ARIAAMREAMGD-DADIIVEIHS--L--L--GTNSAIQFAKAIEKYRIFLYE----EPIHPLNSDNMQKVSRSTTIPIAT 274 (410)
T ss_dssp HHHHHHHHHHCS-SSEEEEECTT--C--S--CHHHHHHHHHHHGGGCEEEEE----CSSCSSCHHHHHHHHHHCSSCEEE
T ss_pred HHHHHHHHhcCC-CCEEEEECCC--C--C--CHHHHHHHHHHHHhcCCCeEE----CCCChhhHHHHHHHHhhCCCCEEe
Confidence 334456777774 6666545431 1 1 112223344444446777642 111123578899999999999999
Q ss_pred ecCC-ChHhHHHhhc---CCEEEE
Q psy9039 220 GSGV-TSDNVEHYMT---ADALII 239 (251)
Q Consensus 220 G~GI-~~~~v~~~~~---ADGvIV 239 (251)
+..+ +++.+++++. +|.+.+
T Consensus 275 dE~~~~~~~~~~~i~~~~~d~v~i 298 (410)
T 2gl5_A 275 GERSYTRWGYRELLEKQSIAVAQP 298 (410)
T ss_dssp CTTCCTTHHHHHHHHTTCCSEECC
T ss_pred cCCcCCHHHHHHHHHcCCCCEEec
Confidence 9999 6899999883 888765
No 371
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=72.09 E-value=5.5 Score=35.87 Aligned_cols=89 Identities=15% Similarity=0.166 Sum_probs=55.3
Q ss_pred chhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCCCCCCCCHHHHHHHHhcCCCCEEE
Q psy9039 140 GPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNATGDPADVSQLMSVKNAVDLPILI 219 (251)
Q Consensus 140 ~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~g~~~~~~~l~~vr~~~~~PV~v 219 (251)
+.+...|+.+|. ++.+.-|.+- + + +.....+.++..+.++++.+- ..-.+.+.+.++++|+.+++||+.
T Consensus 187 e~v~avr~a~G~-d~~l~vD~n~--~--~--~~~~a~~~~~~l~~~~i~~iE----~P~~~~~~~~~~~l~~~~~ipIa~ 255 (392)
T 2poz_A 187 RRVKAVRDAAGP-EIELMVDLSG--G--L--TTDETIRFCRKIGELDICFVE----EPCDPFDNGALKVISEQIPLPIAV 255 (392)
T ss_dssp HHHHHHHHHHCT-TSEEEEECTT--C--S--CHHHHHHHHHHHGGGCEEEEE----CCSCTTCHHHHHHHHHHCSSCEEE
T ss_pred HHHHHHHHhcCC-CCEEEEECCC--C--C--CHHHHHHHHHHHHhcCCCEEE----CCCCcccHHHHHHHHhhCCCCEEe
Confidence 334455777774 6666544431 1 1 112223344444446777652 111123578899999999999999
Q ss_pred ecCC-ChHhHHHhhc---CCEEEE
Q psy9039 220 GSGV-TSDNVEHYMT---ADALII 239 (251)
Q Consensus 220 G~GI-~~~~v~~~~~---ADGvIV 239 (251)
+..+ +++.+++++. +|.+.+
T Consensus 256 dE~~~~~~~~~~~i~~~~~d~v~i 279 (392)
T 2poz_A 256 GERVYTRFGFRKIFELQACGIIQP 279 (392)
T ss_dssp CTTCCHHHHHHHHHTTTCCSEECC
T ss_pred cCCcCCHHHHHHHHHcCCCCEEec
Confidence 9999 5888999884 888865
No 372
>3go2_A Putative L-alanine-DL-glutamate epimerase; structural genomics, isomerase, PSI-2; 1.70A {Burkholderia xenovorans} PDB: 2oo6_A 3sn0_A 3sn1_A* 3sn4_A*
Probab=72.07 E-value=8.4 Score=35.06 Aligned_cols=89 Identities=17% Similarity=0.151 Sum_probs=57.7
Q ss_pred chhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCCCCCCCCHHHHHHHHhcCCCCEEE
Q psy9039 140 GPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNATGDPADVSQLMSVKNAVDLPILI 219 (251)
Q Consensus 140 ~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~g~~~~~~~l~~vr~~~~~PV~v 219 (251)
+.+...|+.+|. ++.+.-|.+-. + +.....+.++..+.++++.+-.- ..+.+.++++|+.+++||++
T Consensus 201 e~v~avR~avG~-d~~l~vDaN~~----~--~~~~A~~~~~~L~~~~i~~iE~P------~~d~~~~~~l~~~~~iPIa~ 267 (409)
T 3go2_A 201 AHLEALRDGAGP-DVEILLDLNFN----A--KPEGYLKILRELADFDLFWVEID------SYSPQGLAYVRNHSPHPISS 267 (409)
T ss_dssp HHHHHHHHHHCT-TSEEEEECTTC----S--CHHHHHHHHHHTTTSCCSEEECC------CSCHHHHHHHHHTCSSCEEE
T ss_pred HHHHHHHHHhCC-CCEEEEECCCC----C--CHHHHHHHHHHHhhcCCeEEEeC------cCCHHHHHHHHhhCCCCEEe
Confidence 345567788874 66665554311 1 11122233344444677776521 13678899999999999999
Q ss_pred ecCC-ChHhHHHhhc---CCEEEEec
Q psy9039 220 GSGV-TSDNVEHYMT---ADALIIGS 241 (251)
Q Consensus 220 G~GI-~~~~v~~~~~---ADGvIVGS 241 (251)
+.-+ +++++.+++. +|.+.+--
T Consensus 268 dE~~~~~~~~~~~i~~~~~d~v~~k~ 293 (409)
T 3go2_A 268 CETLFGIREFKPFFDANAVDVAIVDT 293 (409)
T ss_dssp CTTCCHHHHHHHHHHTTCCSEEEECH
T ss_pred CCCcCCHHHHHHHHHhCCCCEEEeCC
Confidence 9999 5888988883 89887754
No 373
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=71.82 E-value=6.4 Score=35.59 Aligned_cols=93 Identities=12% Similarity=0.048 Sum_probs=56.6
Q ss_pred cchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCCCCCCCCHHHHHHHHh-cCCCCE
Q psy9039 139 AGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNATGDPADVSQLMSVKN-AVDLPI 217 (251)
Q Consensus 139 a~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~g~~~~~~~l~~vr~-~~~~PV 217 (251)
.+-+...|+.+|. ++.+.-|.+- +. ..+.....+.++..+.++++.+- ..-.+.+.+.++++++ .+++||
T Consensus 180 ~e~v~avr~a~G~-d~~l~vDan~--~~--~~~~~~a~~~~~~l~~~~i~~iE----qP~~~~d~~~~~~l~~~~~~iPI 250 (401)
T 2hzg_A 180 ADQIMAAREGLGP-DGDLMVDVGQ--IF--GEDVEAAAARLPTLDAAGVLWLE----EPFDAGALAAHAALAGRGARVRI 250 (401)
T ss_dssp HHHHHHHHHHHCS-SSEEEEECTT--TT--TTCHHHHHTTHHHHHHTTCSEEE----CCSCTTCHHHHHHHHTTCCSSEE
T ss_pred HHHHHHHHHHhCC-CCeEEEECCC--CC--CCCHHHHHHHHHHHHhcCCCEEE----CCCCccCHHHHHHHHhhCCCCCE
Confidence 3444556777764 5666544431 11 00111222233343446777652 1111236788999999 899999
Q ss_pred EEecCC-ChHhHHHhhc---CCEEEEe
Q psy9039 218 LIGSGV-TSDNVEHYMT---ADALIIG 240 (251)
Q Consensus 218 ~vG~GI-~~~~v~~~~~---ADGvIVG 240 (251)
+.+..+ +++.++++++ +|.+.+-
T Consensus 251 ~~dE~~~~~~~~~~~i~~~~~d~v~ik 277 (401)
T 2hzg_A 251 AGGEAAHNFHMAQHLMDYGRIGFIQID 277 (401)
T ss_dssp EECTTCSSHHHHHHHHHHSCCSEEEEC
T ss_pred EecCCcCCHHHHHHHHHCCCCCEEEeC
Confidence 999999 7899998883 9999873
No 374
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=71.81 E-value=8.4 Score=34.27 Aligned_cols=90 Identities=17% Similarity=0.330 Sum_probs=56.4
Q ss_pred cchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHH-HHHHHhhhccccEEEecCCCCCC-CCCHHHHHHHHhcCCCC
Q psy9039 139 AGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDIT-ETAKAASFFLSDGLIITGNATGD-PADVSQLMSVKNAVDLP 216 (251)
Q Consensus 139 a~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~-~~a~~a~~~~~D~v~VTG~~~g~-~~~~~~l~~vr~~~~~P 216 (251)
.+.+...|+.+|. ++.+.-|.+ .+ + +..... +.++..+.++++.+- ... +.+.+.++++|+.+++|
T Consensus 172 ~e~v~avr~a~g~-~~~l~vDan--~~--~--~~~~a~~~~~~~l~~~~i~~iE-----qP~~~~d~~~~~~l~~~~~iP 239 (369)
T 2p8b_A 172 VKRIEAVRERVGN-DIAIRVDVN--QG--W--KNSANTLTALRSLGHLNIDWIE-----QPVIADDIDAMAHIRSKTDLP 239 (369)
T ss_dssp HHHHHHHHHHHCT-TSEEEEECT--TT--T--BSHHHHHHHHHTSTTSCCSCEE-----CCBCTTCHHHHHHHHHTCCSC
T ss_pred HHHHHHHHHHhCC-CCeEEEECC--CC--C--CHHHHHHHHHHHHHhCCCcEEE-----CCCCcccHHHHHHHHHhCCCC
Confidence 3445556777764 555543433 11 1 112223 344444446777642 112 23578899999999999
Q ss_pred EEEecCC-ChHhHHHhhc---CCEEEEe
Q psy9039 217 ILIGSGV-TSDNVEHYMT---ADALIIG 240 (251)
Q Consensus 217 V~vG~GI-~~~~v~~~~~---ADGvIVG 240 (251)
|+.+.-+ +++.+.+++. +|++.+-
T Consensus 240 I~~dE~~~~~~~~~~~i~~~~~d~v~ik 267 (369)
T 2p8b_A 240 LMIDEGLKSSREMRQIIKLEAADKVNIK 267 (369)
T ss_dssp EEESTTCCSHHHHHHHHHHTCCSEEEEC
T ss_pred EEeCCCCCCHHHHHHHHHhCCCCEEEee
Confidence 9999999 6888988884 9998874
No 375
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=71.73 E-value=28 Score=30.27 Aligned_cols=170 Identities=14% Similarity=0.121 Sum_probs=75.6
Q ss_pred CCCcCCCCccEEEEee-cCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeCChHHHHHHH---HHcCccc
Q psy9039 43 PPSVPVGVQHGVIVEN-MHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQILSGCNKAALATA---QAAGLDF 118 (251)
Q Consensus 43 ~~l~~~Gv~D~i~ieN-~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~~~~~~ia---~a~g~~F 118 (251)
+-|+++|+ |||.+.= -+-.|.- .-.+..+-+..+++.+.. . +|+.+.+-.|....+...+ ...|++.
T Consensus 44 ~~li~~Gv-~gl~v~GttGE~~~L----s~~Er~~v~~~~~~~~~g--r--vpviaGvg~~st~~ai~la~~A~~~Gada 114 (304)
T 3cpr_A 44 AYLVDKGL-DSLVLAGTTGESPTT----TAAEKLELLKAVREEVGD--R--AKLIAGVGTNNTRTSVELAEAAASAGADG 114 (304)
T ss_dssp HHHHHTTC-CEEEESSTTTTTTTS----CHHHHHHHHHHHHHHHTT--T--SEEEEECCCSCHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHcCC-CEEEECccccChhhC----CHHHHHHHHHHHHHHhCC--C--CcEEecCCCCCHHHHHHHHHHHHhcCCCE
Confidence 55678899 9998621 1112221 122333333333333322 2 6888887777644444333 3344444
Q ss_pred eecccccccccCCCceeecCcchhHHHHHhcCC-Ccchh-hhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCC
Q psy9039 119 IRAESFVFGHMADEGLMNAQAGPLLRYRKQIGA-DNVLV-FTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNA 196 (251)
Q Consensus 119 ir~~~~~~~~~~~~Gli~~da~e~~~~r~~l~~-~~i~i-~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~ 196 (251)
+-.- ..-...+..+++.++.+.+-. -++.+ ++++-...|.. .+.+.+.+.++.-. |.|-+
T Consensus 115 vlv~--------~P~y~~~~~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~-----l~~~~~~~La~~pn-----IvgiK 176 (304)
T 3cpr_A 115 LLVV--------TPYYSKPSQEGLLAHFGAIAAATEVPICLYDIPGRSGIP-----IESDTMRRLSELPT-----ILAVX 176 (304)
T ss_dssp EEEE--------CCCSSCCCHHHHHHHHHHHHHHCCSCEEEEECHHHHSSC-----CCHHHHHHHTTSTT-----EEEEE
T ss_pred EEEC--------CCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCcC-----CCHHHHHHHHcCCC-----EEEEe
Confidence 3320 111112334555555444311 12222 33333233433 23344444443211 22222
Q ss_pred CCCCCCHHHHHHHHhcCCCCEEEecCCChHhHHHhhc-CCEEEEece
Q psy9039 197 TGDPADVSQLMSVKNAVDLPILIGSGVTSDNVEHYMT-ADALIIGSH 242 (251)
Q Consensus 197 ~g~~~~~~~l~~vr~~~~~PV~vG~GI~~~~v~~~~~-ADGvIVGS~ 242 (251)
.. ..+...+.++++..+.-|+.|.. .--+..+.. ++|+|-|++
T Consensus 177 ds-sgd~~~~~~~~~~~~f~v~~G~d--~~~l~~l~~G~~G~is~~a 220 (304)
T 3cpr_A 177 DA-KGDLVAATSLIKETGLAWYSGDD--PLNLVWLALGGSGFISVIG 220 (304)
T ss_dssp EC-SCCHHHHHHHHHHHCCEEEECSG--GGHHHHHHTTCCEEEESGG
T ss_pred cC-CCCHHHHHHHHHhcCEEEEECcH--HHHHHHHHCCCCEEEecHH
Confidence 11 12455666555443566665543 222333444 999998875
No 376
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=70.99 E-value=5.6 Score=35.86 Aligned_cols=91 Identities=12% Similarity=0.154 Sum_probs=57.3
Q ss_pred CcchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCCCCCC-CCHHHHHHHHhcCCCC
Q psy9039 138 QAGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNATGDP-ADVSQLMSVKNAVDLP 216 (251)
Q Consensus 138 da~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~g~~-~~~~~l~~vr~~~~~P 216 (251)
|.+.+...|+.+|. ++.+.-|.+-. + +.....+.++..+.++++.+- ...+ .+.+.++++|+.+++|
T Consensus 180 d~~~v~avR~a~g~-~~~l~vDan~~----~--~~~~A~~~~~~l~~~~i~~iE-----qP~~~~d~~~~~~l~~~~~iP 247 (383)
T 3i4k_A 180 DTRRVAELAREVGD-RVSLRIDINAR----W--DRRTALHYLPILAEAGVELFE-----QPTPADDLETLREITRRTNVS 247 (383)
T ss_dssp HHHHHHHHHHTTTT-TSEEEEECTTC----S--CHHHHHHHHHHHHHTTCCEEE-----SCSCTTCHHHHHHHHHHHCCE
T ss_pred HHHHHHHHHHHcCC-CCEEEEECCCC----C--CHHHHHHHHHHHHhcCCCEEE-----CCCChhhHHHHHHHHhhCCCC
Confidence 34455566777774 56665454311 1 112222333444446777652 1222 3567899999999999
Q ss_pred EEEecCC-ChHhHHHhhc---CCEEEEe
Q psy9039 217 ILIGSGV-TSDNVEHYMT---ADALIIG 240 (251)
Q Consensus 217 V~vG~GI-~~~~v~~~~~---ADGvIVG 240 (251)
|+.+.-+ +++++.+++. +|.+.+-
T Consensus 248 Ia~dE~~~~~~~~~~~i~~~~~d~v~~k 275 (383)
T 3i4k_A 248 VMADESVWTPAEALAVVKAQAADVIALK 275 (383)
T ss_dssp EEESTTCSSHHHHHHHHHHTCCSEEEEC
T ss_pred EEecCccCCHHHHHHHHHcCCCCEEEEc
Confidence 9999999 6899998883 8988764
No 377
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A
Probab=70.97 E-value=5.9 Score=36.53 Aligned_cols=89 Identities=15% Similarity=0.147 Sum_probs=56.3
Q ss_pred cchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCCCCCC-CCHHHHHHHHhcCCCCE
Q psy9039 139 AGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNATGDP-ADVSQLMSVKNAVDLPI 217 (251)
Q Consensus 139 a~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~g~~-~~~~~l~~vr~~~~~PV 217 (251)
.+.+...|+.+|. ++.+.-|.+-. + +.....+.++..+.++++.+- ...+ .+.+.++++|+.+++||
T Consensus 190 ~e~v~avR~avG~-d~~L~vDan~~----~--t~~~A~~~~~~Le~~~i~~iE-----eP~~~~~~~~~~~l~~~~~iPI 257 (433)
T 3rcy_A 190 VEFCRKIRAAVGD-KADLLFGTHGQ----F--TTAGAIRLGQAIEPYSPLWYE-----EPVPPDNVGAMAQVARAVRIPV 257 (433)
T ss_dssp HHHHHHHHHHHTT-SSEEEECCCSC----B--CHHHHHHHHHHHGGGCCSEEE-----CCSCTTCHHHHHHHHHHSSSCE
T ss_pred HHHHHHHHHHhCC-CCeEEEeCCCC----C--CHHHHHHHHHHhhhcCCCEEE-----CCCChhhHHHHHHHHhccCCCE
Confidence 3445567778874 66665454311 1 111222333444446777752 1122 35788999999999999
Q ss_pred EEecCC-ChHhHHHhhc---CCEEEE
Q psy9039 218 LIGSGV-TSDNVEHYMT---ADALII 239 (251)
Q Consensus 218 ~vG~GI-~~~~v~~~~~---ADGvIV 239 (251)
+.+.-+ ++.++.+++. +|.+.+
T Consensus 258 a~dE~~~~~~~~~~~l~~g~~D~v~~ 283 (433)
T 3rcy_A 258 ATGERLTTKAEFAPVLREGAAAILQP 283 (433)
T ss_dssp EECTTCCSHHHHHHHHHTTCCSEECC
T ss_pred EecCCCCCHHHHHHHHHcCCCCEEEe
Confidence 999999 6899998883 888754
No 378
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=70.89 E-value=4.7 Score=35.52 Aligned_cols=77 Identities=19% Similarity=0.136 Sum_probs=44.4
Q ss_pred CCCcCCCCccEEEEeecC-CC------CccccC--CCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeCChHHHHHHHHH
Q psy9039 43 PPSVPVGVQHGVIVENMH-DV------PYVLEA--ESGPEITANMTRLCAEIRKVLPPSVPVGVQILSGCNKAALATAQA 113 (251)
Q Consensus 43 ~~l~~~Gv~D~i~ieN~~-~~------Pf~~p~--~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~~~~~~ia~a 113 (251)
+.+++.|+ |+|.+.|-. +. |+..+. ..|+.......+.++++++.++..+|+..+.=..++.. ..-+.+
T Consensus 232 ~~l~~~Gv-d~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~~~~~~ipVi~~GGI~~~~d-a~~~l~ 309 (336)
T 1f76_A 232 DSLVRHNI-DGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLELNGRLPIIGVGGIDSVIA-AREKIA 309 (336)
T ss_dssp HHHHHTTC-SEEEECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHHHHHHTTSSCEEEESSCCSHHH-HHHHHH
T ss_pred HHHHHcCC-cEEEEeCCcccccccccccccccCCCcCCchhHHHHHHHHHHHHHHhCCCCCEEEECCCCCHHH-HHHHHH
Confidence 56778999 999998854 11 111110 02432223344677788887621178877765555333 333345
Q ss_pred cCccceec
Q psy9039 114 AGLDFIRA 121 (251)
Q Consensus 114 ~g~~Fir~ 121 (251)
.|++++..
T Consensus 310 ~GAd~V~i 317 (336)
T 1f76_A 310 AGASLVQI 317 (336)
T ss_dssp HTCSEEEE
T ss_pred CCCCEEEe
Confidence 78888875
No 379
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=70.51 E-value=5.5 Score=35.97 Aligned_cols=88 Identities=16% Similarity=0.150 Sum_probs=55.2
Q ss_pred chhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCCCCCC-CCHHHHHHHHhcCCCCEE
Q psy9039 140 GPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNATGDP-ADVSQLMSVKNAVDLPIL 218 (251)
Q Consensus 140 ~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~g~~-~~~~~l~~vr~~~~~PV~ 218 (251)
+-+...|+.+|. ++.+.-|.+- + + +.....+.++..+.++++.+- ...+ .+.+.++++|+.+++||+
T Consensus 197 e~v~avr~avG~-d~~l~vDan~--~--~--~~~~ai~~~~~l~~~~i~~iE-----~P~~~~d~~~~~~l~~~~~iPIa 264 (403)
T 2ox4_A 197 ERVEAIRNAVGP-DVDIIVENHG--H--T--DLVSAIQFAKAIEEFNIFFYE-----EINTPLNPRLLKEAKKKIDIPLA 264 (403)
T ss_dssp HHHHHHHHHHCT-TSEEEEECTT--C--S--CHHHHHHHHHHHGGGCEEEEE-----CCSCTTSTHHHHHHHHTCCSCEE
T ss_pred HHHHHHHHHhCC-CCeEEEECCC--C--C--CHHHHHHHHHHHHhhCCCEEe-----CCCChhhHHHHHHHHHhCCCCEE
Confidence 334455677774 6666545431 1 1 112223344444446777652 1122 356889999999999999
Q ss_pred EecCC-ChHhHHHhhc---CCEEEE
Q psy9039 219 IGSGV-TSDNVEHYMT---ADALII 239 (251)
Q Consensus 219 vG~GI-~~~~v~~~~~---ADGvIV 239 (251)
.+..+ +++.+++++. +|.+.+
T Consensus 265 ~dE~~~~~~~~~~~i~~~~~d~v~i 289 (403)
T 2ox4_A 265 SGERIYSRWGFLPFLEDRSIDVIQP 289 (403)
T ss_dssp ECTTCCHHHHHHHHHHTTCCSEECC
T ss_pred ecCCcCCHHHHHHHHHcCCCCEEec
Confidence 99999 5788998883 888765
No 380
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=70.43 E-value=4.2 Score=36.85 Aligned_cols=91 Identities=18% Similarity=0.204 Sum_probs=57.3
Q ss_pred CcchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCCCCCC-CCHHHHHHHH-hcCCC
Q psy9039 138 QAGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNATGDP-ADVSQLMSVK-NAVDL 215 (251)
Q Consensus 138 da~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~g~~-~~~~~l~~vr-~~~~~ 215 (251)
|.+-+...|+.+|. ++.+.-|.+- + + +.....+.++..+.++++.+- ...+ .+.+.++++| +.+++
T Consensus 181 d~~~v~avR~a~g~-d~~l~vDan~--~--~--~~~~A~~~~~~l~~~~i~~iE-----qP~~~~d~~~~~~l~~~~~~i 248 (389)
T 3ozy_A 181 DAANLRAMRQRVGA-DVEILVDANQ--S--L--GRHDALAMLRILDEAGCYWFE-----EPLSIDDIEGHRILRAQGTPV 248 (389)
T ss_dssp HHHHHHHHHHHHCT-TSEEEEECTT--C--C--CHHHHHHHHHHHHHTTCSEEE-----SCSCTTCHHHHHHHHTTCCSS
T ss_pred HHHHHHHHHHHcCC-CceEEEECCC--C--c--CHHHHHHHHHHHHhcCCCEEE-----CCCCcccHHHHHHHHhcCCCC
Confidence 34555667778874 5666544431 1 1 112222333444446777762 1222 3578899999 99999
Q ss_pred CEEEecCC-ChHhHHHhhc---CCEEEEe
Q psy9039 216 PILIGSGV-TSDNVEHYMT---ADALIIG 240 (251)
Q Consensus 216 PV~vG~GI-~~~~v~~~~~---ADGvIVG 240 (251)
||+.+.-+ +++++.++++ +|.+.+-
T Consensus 249 PIa~dE~i~~~~~~~~~i~~~~~d~v~ik 277 (389)
T 3ozy_A 249 RIATGENLYTRNAFNDYIRNDAIDVLQAD 277 (389)
T ss_dssp EEEECTTCCHHHHHHHHHHTTCCSEECCC
T ss_pred CEEeCCCCCCHHHHHHHHHcCCCCEEEeC
Confidence 99999999 5788888873 8888653
No 381
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=70.27 E-value=17 Score=30.98 Aligned_cols=67 Identities=21% Similarity=0.189 Sum_probs=48.4
Q ss_pred cccHHHHHHHhhhccccEEEe-cCCCCCCCCCHHHHHHHHhcCCCCEEEe-cCCChHhHHHhhc--CCEEEEe
Q psy9039 172 DVDITETAKAASFFLSDGLII-TGNATGDPADVSQLMSVKNAVDLPILIG-SGVTSDNVEHYMT--ADALIIG 240 (251)
Q Consensus 172 ~~~i~~~a~~a~~~~~D~v~V-TG~~~g~~~~~~~l~~vr~~~~~PV~vG-~GI~~~~v~~~~~--ADGvIVG 240 (251)
+....++|+..+.. ++++-| |-.+ -...+.+.|.++|+.+++||+.= |++++-++.++.. ||++.+=
T Consensus 60 ~~~~~~iA~~y~~~-A~~IsVlTd~~-~F~gs~~dL~~ir~~v~lPvLrKDfi~~~~qi~ea~~~GAD~ilLi 130 (251)
T 1i4n_A 60 DASLEDFIRMYDEL-ADAISILTEKH-YFKGDPAFVRAARNLTCRPILAKDFYIDTVQVKLASSVGADAILII 130 (251)
T ss_dssp TCCHHHHHHHHHHH-CSEEEEECCCS-SSCCCTHHHHHHHTTCCSCEEEECCCCSTHHHHHHHHTTCSEEEEE
T ss_pred CCCHHHHHHHHHHh-CCceEEEeccc-ccCCCHHHHHHHHHhCCCCEEEeeCCCCHHHHHHHHHcCCCEEEEe
Confidence 34667788777766 777744 5543 23456789999999999999864 5567778888664 9997653
No 382
>3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia}
Probab=69.95 E-value=11 Score=34.08 Aligned_cols=90 Identities=18% Similarity=0.147 Sum_probs=59.9
Q ss_pred CcchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCCCCCC-CCHHHHHHHHhcCCCC
Q psy9039 138 QAGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNATGDP-ADVSQLMSVKNAVDLP 216 (251)
Q Consensus 138 da~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~g~~-~~~~~l~~vr~~~~~P 216 (251)
|.+.+...|+.+|. ++.+.-|.+-. + +. .. .+.++..+.++++.+- ...+ .+.+.++++++.+++|
T Consensus 191 d~~~v~avR~a~G~-~~~L~vDaN~~----w-~~-~~-~~~~~~l~~~~i~~iE-----qP~~~~d~~~~~~l~~~~~iP 257 (400)
T 3mwc_A 191 DVEPLQETRRAVGD-HFPLWTDANSS----F-EL-DQ-WETFKAMDAAKCLFHE-----QPLHYEALLDLKELGERIETP 257 (400)
T ss_dssp SHHHHHHHHHHHCT-TSCEEEECTTC----C-CG-GG-HHHHHHHGGGCCSCEE-----SCSCTTCHHHHHHHHHHSSSC
T ss_pred HHHHHHHHHHhcCC-CCEEEEeCCCC----C-CH-HH-HHHHHHHHhcCCCEEe-----CCCChhhHHHHHHHHhhCCCC
Confidence 45566678888874 66666554422 2 22 23 3455555556776652 1222 2578889999999999
Q ss_pred EEEecCC-ChHhHHHhhc---CCEEEEe
Q psy9039 217 ILIGSGV-TSDNVEHYMT---ADALIIG 240 (251)
Q Consensus 217 V~vG~GI-~~~~v~~~~~---ADGvIVG 240 (251)
|+.+--+ +.+++.+++. +|.+.+-
T Consensus 258 Ia~dE~~~~~~~~~~~~~~~~~d~v~~k 285 (400)
T 3mwc_A 258 ICLDESLISSRVAEFVAKLGISNIWNIK 285 (400)
T ss_dssp EEESTTCCSHHHHHHHHHTTCCSEEEEC
T ss_pred EEEeCCcCCHHHHHHHHhcCCCCEEEEc
Confidence 9999999 6888998883 8888763
No 383
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=69.92 E-value=6.2 Score=34.70 Aligned_cols=69 Identities=23% Similarity=0.113 Sum_probs=34.8
Q ss_pred CCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeCChHHHHHHH---HHcCccce
Q psy9039 43 PPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQILSGCNKAALATA---QAAGLDFI 119 (251)
Q Consensus 43 ~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~~~~~~ia---~a~g~~Fi 119 (251)
+-|+++|+ |||.+ +|. .. ..--.+.+--.++++.+.+.. ..+|+.+.+-.|....+...+ ...|++.+
T Consensus 36 ~~li~~Gv-~Gl~v---~Gt---TG-E~~~Lt~~Er~~v~~~~v~~~-grvpViaGvg~~~t~~ai~la~~A~~~Gadav 106 (313)
T 3dz1_A 36 DFYAEVGC-EGVTV---LGI---LG-EAPKLDAAEAEAVATRFIKRA-KSMQVIVGVSAPGFAAMRRLARLSMDAGAAGV 106 (313)
T ss_dssp HHHHHTTC-SEEEE---STG---GG-TGGGSCHHHHHHHHHHHHHHC-TTSEEEEECCCSSHHHHHHHHHHHHHHTCSEE
T ss_pred HHHHHCCC-CEEEe---Ccc---Cc-ChhhCCHHHHHHHHHHHHHHc-CCCcEEEecCCCCHHHHHHHHHHHHHcCCCEE
Confidence 55778999 99986 332 00 000112222233445554444 236988888777644444333 33455443
Q ss_pred e
Q psy9039 120 R 120 (251)
Q Consensus 120 r 120 (251)
-
T Consensus 107 l 107 (313)
T 3dz1_A 107 M 107 (313)
T ss_dssp E
T ss_pred E
Confidence 3
No 384
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=69.53 E-value=1.6 Score=38.57 Aligned_cols=47 Identities=13% Similarity=0.150 Sum_probs=33.5
Q ss_pred HHHHHhhCCCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEee
Q psy9039 35 CAEIRKVLPPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQILS 101 (251)
Q Consensus 35 ~~~a~~~a~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~ 101 (251)
++.+++++++++++|+ |+|.+| ++| ....++++.+.++ +|+.+|+..
T Consensus 166 l~~ai~ra~ay~eAGA-d~i~~e---~~~--------------~~~~~~~i~~~~~--iP~~~N~~~ 212 (295)
T 1xg4_A 166 LDAAIERAQAYVEAGA-EMLFPE---AIT--------------ELAMYRQFADAVQ--VPILANITE 212 (295)
T ss_dssp HHHHHHHHHHHHHTTC-SEEEET---TCC--------------SHHHHHHHHHHHC--SCBEEECCS
T ss_pred HHHHHHHHHHHHHcCC-CEEEEe---CCC--------------CHHHHHHHHHHcC--CCEEEEecc
Confidence 4788889999999999 999873 222 1234455666667 798888763
No 385
>3mqt_A Mandelate racemase/muconate lactonizing protein; PSI-II, NYSGXRC, muconate lactonizing EN structural genomics, protein structure initiative; 2.10A {Shewanella pealeana}
Probab=69.50 E-value=4.6 Score=36.64 Aligned_cols=91 Identities=11% Similarity=-0.060 Sum_probs=57.1
Q ss_pred CcchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCCCCCC-CCHHHHHHHHhcCCCC
Q psy9039 138 QAGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNATGDP-ADVSQLMSVKNAVDLP 216 (251)
Q Consensus 138 da~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~g~~-~~~~~l~~vr~~~~~P 216 (251)
|.+-+...|+.+|. ++.+.-|.+- + + ++.....+.++..+.++++.+- ...+ .+.+.++++|+.+++|
T Consensus 186 d~~~v~avR~a~G~-d~~l~vDan~--~--~-~~~~~A~~~~~~L~~~~i~~iE-----eP~~~~~~~~~~~l~~~~~iP 254 (394)
T 3mqt_A 186 IVAYLRELREVIGW-DMDMMVDCLY--R--W-TDWQKARWTFRQLEDIDLYFIE-----ACLQHDDLIGHQKLAAAINTR 254 (394)
T ss_dssp HHHHHHHHHHHHCS-SSEEEEECTT--C--C-SCHHHHHHHHHHTGGGCCSEEE-----SCSCTTCHHHHHHHHHHSSSE
T ss_pred HHHHHHHHHHHhCC-CCeEEEECCC--C--C-CCHHHHHHHHHHHhhcCCeEEE-----CCCCcccHHHHHHHHhhCCCC
Confidence 34555667888874 6666544431 1 1 0112222334444446777762 1122 3578889999999999
Q ss_pred EEEecCC-ChHhHHHhhc---CCEEEE
Q psy9039 217 ILIGSGV-TSDNVEHYMT---ADALII 239 (251)
Q Consensus 217 V~vG~GI-~~~~v~~~~~---ADGvIV 239 (251)
|+.+..+ +++++.+++. +|.+.+
T Consensus 255 Ia~dE~~~~~~~~~~~l~~~~~d~v~~ 281 (394)
T 3mqt_A 255 LCGAEMSTTRFEAQEWLEKTGISVVQS 281 (394)
T ss_dssp EEECTTCCHHHHHHHHHHHHCCSEECC
T ss_pred EEeCCCcCCHHHHHHHHHcCCCCeEec
Confidence 9999999 5788988883 888765
No 386
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=69.42 E-value=3.6 Score=36.02 Aligned_cols=58 Identities=22% Similarity=0.296 Sum_probs=36.5
Q ss_pred hccccEEEecCCCCCCCC--CH----HHHHHHHhcC--CCCEEEecCC-Ch-HhHH---Hhhc--CCEEEEece
Q psy9039 184 FFLSDGLIITGNATGDPA--DV----SQLMSVKNAV--DLPILIGSGV-TS-DNVE---HYMT--ADALIIGSH 242 (251)
Q Consensus 184 ~~~~D~v~VTG~~~g~~~--~~----~~l~~vr~~~--~~PV~vG~GI-~~-~~v~---~~~~--ADGvIVGS~ 242 (251)
..|+|++++.|+. |+.. +. +.++.+++.+ ++||++|-|- +. +.++ .+.+ |||+.+-+-
T Consensus 36 ~~Gv~gl~v~Gtt-GE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 108 (300)
T 3eb2_A 36 QAGVHGLTPLGST-GEFAYLGTAQREAVVRATIEAAQRRVPVVAGVASTSVADAVAQAKLYEKLGADGILAILE 108 (300)
T ss_dssp HTTCSCBBTTSGG-GTGGGCCHHHHHHHHHHHHHHHTTSSCBEEEEEESSHHHHHHHHHHHHHHTCSEEEEEEC
T ss_pred HcCCCEEEECccc-cCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 3699999888863 4432 22 3355555554 6999999986 44 3333 2223 999988753
No 387
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=69.10 E-value=5.8 Score=35.90 Aligned_cols=88 Identities=10% Similarity=0.147 Sum_probs=55.3
Q ss_pred chhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCCCCC-CCCHHHHHHHHhcCCCCEE
Q psy9039 140 GPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNATGD-PADVSQLMSVKNAVDLPIL 218 (251)
Q Consensus 140 ~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~g~-~~~~~~l~~vr~~~~~PV~ 218 (251)
+.+...|+.+|. ++.+.-|.+- + + +.....+.++..+.++++.+- ... +.+.+.++++|+.+++||+
T Consensus 203 e~v~avR~a~G~-d~~l~vDan~--~--~--~~~~a~~~~~~l~~~~i~~iE-----~P~~~~~~~~~~~l~~~~~iPIa 270 (407)
T 2o56_A 203 DRMAAIRDAVGP-DVDIIAEMHA--F--T--DTTSAIQFGRMIEELGIFYYE-----EPVMPLNPAQMKQVADKVNIPLA 270 (407)
T ss_dssp HHHHHHHHHHCT-TSEEEEECTT--C--S--CHHHHHHHHHHHGGGCCSCEE-----CSSCSSSHHHHHHHHHHCCSCEE
T ss_pred HHHHHHHHhcCC-CCEEEEECCC--C--C--CHHHHHHHHHHHHhcCCCEEe-----CCCChhhHHHHHHHHHhCCCCEE
Confidence 334455777774 6666545431 1 1 112223344444446777652 112 2357889999999999999
Q ss_pred EecCC-ChHhHHHhhc---CCEEEE
Q psy9039 219 IGSGV-TSDNVEHYMT---ADALII 239 (251)
Q Consensus 219 vG~GI-~~~~v~~~~~---ADGvIV 239 (251)
.+..+ +++.+++++. +|.+.+
T Consensus 271 ~dE~~~~~~~~~~~i~~~~~d~v~i 295 (407)
T 2o56_A 271 AGERIYWRWGYRPFLENGSLSVIQP 295 (407)
T ss_dssp ECTTCCHHHHHHHHHHTTCCSEECC
T ss_pred eCCCcCCHHHHHHHHHcCCCCEEec
Confidence 99999 5788998883 888765
No 388
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=69.07 E-value=5.8 Score=34.92 Aligned_cols=58 Identities=19% Similarity=0.272 Sum_probs=36.2
Q ss_pred hccccEEEecCCCCCCCC--CH----HHHHHHHhcC--CCCEEEecCCC-hHhHH---Hhhc--CCEEEEece
Q psy9039 184 FFLSDGLIITGNATGDPA--DV----SQLMSVKNAV--DLPILIGSGVT-SDNVE---HYMT--ADALIIGSH 242 (251)
Q Consensus 184 ~~~~D~v~VTG~~~g~~~--~~----~~l~~vr~~~--~~PV~vG~GI~-~~~v~---~~~~--ADGvIVGS~ 242 (251)
..|+|++++.|+. |+.. +. +.++.+++.+ ++||++|-|-+ .+.++ .+.+ |||+.+-+-
T Consensus 44 ~~Gv~gl~v~GtT-GE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~st~~ai~la~~A~~~Gadavlv~~P 115 (314)
T 3d0c_A 44 QNGIEVIVPNGNT-GEFYALTIEEAKQVATRVTELVNGRATVVAGIGYSVDTAIELGKSAIDSGADCVMIHQP 115 (314)
T ss_dssp HTTCSEECTTSGG-GTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECSSHHHHHHHHHHHHHTTCSEEEECCC
T ss_pred HcCCCEEEECccc-CChhhCCHHHHHHHHHHHHHHhCCCCeEEecCCcCHHHHHHHHHHHHHcCCCEEEECCC
Confidence 3699999888773 4432 21 3355555554 69999998874 33333 2222 999988653
No 389
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=69.07 E-value=14 Score=32.83 Aligned_cols=89 Identities=16% Similarity=0.179 Sum_probs=58.5
Q ss_pred CcchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCCCCC-CCCHHHHHHHHhcCCCC
Q psy9039 138 QAGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNATGD-PADVSQLMSVKNAVDLP 216 (251)
Q Consensus 138 da~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~g~-~~~~~~l~~vr~~~~~P 216 (251)
+.+.+...|+.+|. ++.+.-|.+ .+ + +.+ . .+.++..+.++++.+- ... +.+.+.++++|+.+++|
T Consensus 169 ~~e~v~avr~~~g~-~~~l~vDan--~~--~-~~~-~-~~~~~~l~~~~i~~iE-----~P~~~~~~~~~~~l~~~~~ip 235 (368)
T 1sjd_A 169 DVEPVRAVRERFGD-DVLLQVDAN--TA--Y-TLG-D-APQLARLDPFGLLLIE-----QPLEEEDVLGHAELARRIQTP 235 (368)
T ss_dssp SHHHHHHHHHHHCT-TSEEEEECT--TC--C-CGG-G-HHHHHTTGGGCCSEEE-----CCSCTTCHHHHHHHHTTCSSC
T ss_pred HHHHHHHHHHhcCC-CceEEEecc--CC--C-CHH-H-HHHHHHHHhcCCCeEe-----CCCChhhHHHHHHHHHhCCCC
Confidence 34445567778874 555544443 11 1 222 3 4455555557777652 112 23578889999999999
Q ss_pred EEEecCC-ChHhHHHhhc---CCEEEE
Q psy9039 217 ILIGSGV-TSDNVEHYMT---ADALII 239 (251)
Q Consensus 217 V~vG~GI-~~~~v~~~~~---ADGvIV 239 (251)
|+.+.-+ +++.+.+++. +|.+.+
T Consensus 236 Ia~dE~~~~~~~~~~~i~~~~~d~v~i 262 (368)
T 1sjd_A 236 ICLDESIVSARAAADAIKLGAVQIVNI 262 (368)
T ss_dssp EEESTTCCSHHHHHHHHHTTCCSEEEE
T ss_pred EEECCCcCCHHHHHHHHHcCCCCEEEe
Confidence 9999999 6899998883 898876
No 390
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=68.91 E-value=27 Score=30.19 Aligned_cols=170 Identities=12% Similarity=0.087 Sum_probs=75.2
Q ss_pred CCCcCCCCccEEEEeecCC-CCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeCChHHHHHHH---HHcCccc
Q psy9039 43 PPSVPVGVQHGVIVENMHD-VPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQILSGCNKAALATA---QAAGLDF 118 (251)
Q Consensus 43 ~~l~~~Gv~D~i~ieN~~~-~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~~~~~~ia---~a~g~~F 118 (251)
+-+++.|+ |||.+-=-.| .|.- .-.+..+-+..+++.++. . +|+.+-+-.|....+...+ ...|++.
T Consensus 28 ~~li~~Gv-~gl~~~GttGE~~~L----s~~Er~~v~~~~~~~~~g--r--vpviaGvg~~~t~~ai~la~~A~~~Gada 98 (294)
T 2ehh_A 28 EFHVDNGT-DAILVCGTTGESPTL----TFEEHEKVIEFAVKRAAG--R--IKVIAGTGGNATHEAVHLTAHAKEVGADG 98 (294)
T ss_dssp HHHHTTTC-CEEEESSTTTTGGGS----CHHHHHHHHHHHHHHHTT--S--SEEEEECCCSCHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHCCC-CEEEECccccChhhC----CHHHHHHHHHHHHHHhCC--C--CcEEEecCCCCHHHHHHHHHHHHhcCCCE
Confidence 56778999 9998621111 2211 122333333333333322 2 6888887777644444333 3344444
Q ss_pred eecccccccccCCCceeecCcchhHHHHHhcCC-Ccchh-hhhhHhhccCCCCCCcccHHHHHHHh-hhccccEEEecCC
Q psy9039 119 IRAESFVFGHMADEGLMNAQAGPLLRYRKQIGA-DNVLV-FTDIKKKHSSHAITADVDITETAKAA-SFFLSDGLIITGN 195 (251)
Q Consensus 119 ir~~~~~~~~~~~~Gli~~da~e~~~~r~~l~~-~~i~i-~a~v~~k~~~~~~~~~~~i~~~a~~a-~~~~~D~v~VTG~ 195 (251)
+-.- ..-...+..+++.++.+.+-. -++.+ ++++-...|..+ +.+.+.+.+ +.-. |.|-
T Consensus 99 vlv~--------~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l-----~~~~~~~La~~~pn-----ivgi 160 (294)
T 2ehh_A 99 ALVV--------VPYYNKPTQRGLYEHFKTVAQEVDIPIIIYNIPSRTCVEI-----SVDTMFKLASECEN-----IVAS 160 (294)
T ss_dssp EEEE--------CCCSSCCCHHHHHHHHHHHHHHCCSCEEEEECHHHHSCCC-----CHHHHHHHHHHCTT-----EEEE
T ss_pred EEEC--------CCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCcCC-----CHHHHHHHHhhCCC-----EEEE
Confidence 3321 111112334555555444311 11222 333333334432 333333434 2211 2222
Q ss_pred CCCCCCCHHHHHHHHhcC--CCCEEEecCCChHhHHHhhc-CCEEEEece
Q psy9039 196 ATGDPADVSQLMSVKNAV--DLPILIGSGVTSDNVEHYMT-ADALIIGSH 242 (251)
Q Consensus 196 ~~g~~~~~~~l~~vr~~~--~~PV~vG~GI~~~~v~~~~~-ADGvIVGS~ 242 (251)
+. ...+...+.++++.+ +.-|+.|.. .--+..+.. ++|+|-|++
T Consensus 161 Kd-s~gd~~~~~~~~~~~~~~f~v~~G~d--~~~~~~l~~G~~G~is~~a 207 (294)
T 2ehh_A 161 KE-STPNMDRISEIVKRLGESFSVLSGDD--SLTLPMMALGAKGVISVAN 207 (294)
T ss_dssp EE-CCSCHHHHHHHHHHHCTTSEEEESSG--GGHHHHHHTTCCEEEESGG
T ss_pred Ee-CCCCHHHHHHHHHhcCCCeEEEECcH--HHHHHHHHCCCCEEEeCHH
Confidence 21 122466666666544 455555532 222333444 999998875
No 391
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=68.47 E-value=12 Score=33.24 Aligned_cols=90 Identities=19% Similarity=0.200 Sum_probs=57.1
Q ss_pred cchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhh--ccccEEEecCCCCCC-CCCHHHHHHHHhcCCC
Q psy9039 139 AGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASF--FLSDGLIITGNATGD-PADVSQLMSVKNAVDL 215 (251)
Q Consensus 139 a~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~--~~~D~v~VTG~~~g~-~~~~~~l~~vr~~~~~ 215 (251)
.+.+...|+.+|. ++.+.-|.+- + + +.....+.++..+. ++++.+- ... +.+.+.++++++.+++
T Consensus 172 ~~~v~avr~a~g~-~~~l~vDan~--~--~--~~~~a~~~~~~l~~~~~~i~~iE-----qP~~~~d~~~~~~l~~~~~i 239 (366)
T 1tkk_A 172 IARIQEIRKRVGS-AVKLRLDANQ--G--W--RPKEAVTAIRKMEDAGLGIELVE-----QPVHKDDLAGLKKVTDATDT 239 (366)
T ss_dssp HHHHHHHHHHHCS-SSEEEEECTT--C--S--CHHHHHHHHHHHHHTTCCEEEEE-----CCSCTTCHHHHHHHHHHCSS
T ss_pred HHHHHHHHHHhCC-CCeEEEECCC--C--C--CHHHHHHHHHHHhhcCCCceEEE-----CCCCcccHHHHHHHHhhCCC
Confidence 3445556777764 5666544431 1 1 11223334444444 6777651 112 2357888999999999
Q ss_pred CEEEecCC-ChHhHHHhh--c-CCEEEEe
Q psy9039 216 PILIGSGV-TSDNVEHYM--T-ADALIIG 240 (251)
Q Consensus 216 PV~vG~GI-~~~~v~~~~--~-ADGvIVG 240 (251)
||+.+.-+ +++.+.+++ . +|.+.+-
T Consensus 240 pIa~dE~~~~~~~~~~~i~~~~~d~v~ik 268 (366)
T 1tkk_A 240 PIMADESVFTPRQAFEVLQTRSADLINIK 268 (366)
T ss_dssp CEEECTTCCSHHHHHHHHHHTCCSEEEEC
T ss_pred CEEEcCCCCCHHHHHHHHHhCCCCEEEee
Confidence 99999999 688899888 3 9998873
No 392
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=68.41 E-value=9.6 Score=31.59 Aligned_cols=65 Identities=18% Similarity=0.133 Sum_probs=44.2
Q ss_pred ccHHHHHHHhhhccccEEEecCCCCCCCCCHHHHHHHHhcCCCCEEEecCC--ChHhHHHhhc--CCEEEEec
Q psy9039 173 VDITETAKAASFFLSDGLIITGNATGDPADVSQLMSVKNAVDLPILIGSGV--TSDNVEHYMT--ADALIIGS 241 (251)
Q Consensus 173 ~~i~~~a~~a~~~~~D~v~VTG~~~g~~~~~~~l~~vr~~~~~PV~vG~GI--~~~~v~~~~~--ADGvIVGS 241 (251)
+...+.++.+...|++.+-+|=. + ....+.++++++... .+++|.|. +.+++...+. ||++..|.
T Consensus 28 ~~~~~~~~al~~gGv~~iel~~k-~--~~~~~~i~~l~~~~~-~~~vgagtvi~~d~~~~A~~aGAd~v~~p~ 96 (214)
T 1wbh_A 28 EHAVPMAKALVAGGVRVLNVTLR-T--ECAVDAIRAIAKEVP-EAIVGAGTVLNPQQLAEVTEAGAQFAISPG 96 (214)
T ss_dssp GGHHHHHHHHHHTTCCEEEEESC-S--TTHHHHHHHHHHHCT-TSEEEEESCCSHHHHHHHHHHTCSCEEESS
T ss_pred HHHHHHHHHHHHcCCCEEEEeCC-C--hhHHHHHHHHHHHCc-CCEEeeCEEEEHHHHHHHHHcCCCEEEcCC
Confidence 44556666666679999988832 1 223567887777663 24444444 6899998886 99998874
No 393
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=68.41 E-value=5 Score=33.97 Aligned_cols=56 Identities=18% Similarity=0.267 Sum_probs=40.2
Q ss_pred hhccccEEEecCCCCCCCC-C-HHHHHHHHhcCCCCEEEecCCChHhHHHhhc-CCEEEEeceEe
Q psy9039 183 SFFLSDGLIITGNATGDPA-D-VSQLMSVKNAVDLPILIGSGVTSDNVEHYMT-ADALIIGSHFK 244 (251)
Q Consensus 183 ~~~~~D~v~VTG~~~g~~~-~-~~~l~~vr~~~~~PV~vG~GI~~~~v~~~~~-ADGvIVGS~~~ 244 (251)
...|+|++.|-|+. |... + .+.++++|+ +++|+++ |-=+++++ .. |||+++=|-+-
T Consensus 28 ~~~GtD~i~vGGs~-gvt~~~~~~~v~~ik~-~~~Pvvl-fp~~~~~v---~~gaD~~l~pslln 86 (228)
T 3vzx_A 28 CESGTDAVIIGGSD-GVTEDNVLRMMSKVRR-FLVPCVL-EVSAIEAI---VPGFDLYFIPSVLN 86 (228)
T ss_dssp HTSSCSEEEECCCS-CCCHHHHHHHHHHHTT-SSSCEEE-ECSCGGGC---CSCCSEEEEEEETT
T ss_pred HHcCCCEEEECCcC-CCCHHHHHHHHHHhhc-cCCCEEE-eCCCHHHc---cccCCEEEEeeecC
Confidence 35699999999864 3333 2 367889998 8999998 44445443 45 99999877654
No 394
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=68.38 E-value=8.6 Score=34.21 Aligned_cols=89 Identities=11% Similarity=0.044 Sum_probs=55.0
Q ss_pred chhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCCCCC-CCCHHHHHHHHhcCCCCEE
Q psy9039 140 GPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNATGD-PADVSQLMSVKNAVDLPIL 218 (251)
Q Consensus 140 ~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~g~-~~~~~~l~~vr~~~~~PV~ 218 (251)
+.+...|+.+|. ++.+.-|.+ .+ + +.....+.++..+.++++.+- ... +.+.+.++++|+.+++||+
T Consensus 176 e~v~avr~a~g~-~~~l~vDan--~~--~--~~~~a~~~~~~l~~~~i~~iE-----qP~~~~~~~~~~~l~~~~~ipIa 243 (370)
T 1nu5_A 176 EHIRSIVKAVGD-RASVRVDVN--QG--W--DEQTASIWIPRLEEAGVELVE-----QPVPRANFGALRRLTEQNGVAIL 243 (370)
T ss_dssp HHHHHHHHHHGG-GCEEEEECT--TC--C--CHHHHHHHHHHHHHHTCCEEE-----CCSCTTCHHHHHHHHHHCSSEEE
T ss_pred HHHHHHHHhcCC-CCEEEEECC--CC--C--CHHHHHHHHHHHHhcCcceEe-----CCCCcccHHHHHHHHHhCCCCEE
Confidence 344455666763 555544433 11 1 112223334444446777642 112 2357889999999999999
Q ss_pred EecCC-ChHhHHHhhc---CCEEEEe
Q psy9039 219 IGSGV-TSDNVEHYMT---ADALIIG 240 (251)
Q Consensus 219 vG~GI-~~~~v~~~~~---ADGvIVG 240 (251)
.+.-+ +++.+.+++. +|.+.+-
T Consensus 244 ~dE~~~~~~~~~~~i~~~~~d~v~ik 269 (370)
T 1nu5_A 244 ADESLSSLSSAFELARDHAVDAFSLK 269 (370)
T ss_dssp ESTTCCSHHHHHHHHHTTCCSEEEEC
T ss_pred eCCCCCCHHHHHHHHHhCCCCEEEEc
Confidence 99999 6889998884 8998763
No 395
>3ixl_A Amdase, arylmalonate decarboxylase; enantioselective decarboxylation, lyase; HET: CME PAC; 1.45A {Bordetella bronchiseptica} PDB: 3ixm_A 2vlb_A 3dg9_A 3ip8_A* 3dtv_A* 3eis_A*
Probab=68.35 E-value=7.9 Score=32.62 Aligned_cols=46 Identities=11% Similarity=0.234 Sum_probs=30.3
Q ss_pred cccHHHHHHH-h-hhccccEEEecCCCCCCCCCHHHHHHHHhcCCCCEEEe
Q psy9039 172 DVDITETAKA-A-SFFLSDGLIITGNATGDPADVSQLMSVKNAVDLPILIG 220 (251)
Q Consensus 172 ~~~i~~~a~~-a-~~~~~D~v~VTG~~~g~~~~~~~l~~vr~~~~~PV~vG 220 (251)
...+.+.++. . ...++|++++..+. .+. ...+.++.+...+||+=.
T Consensus 164 ~~~~~~~~~~~l~~~~~adaivL~CT~--l~~-l~~i~~le~~lg~PVids 211 (240)
T 3ixl_A 164 TATLVDLCVRAFEAAPDSDGILLSSGG--LLT-LDAIPEVERRLGVPVVSS 211 (240)
T ss_dssp HHHHHHHHHHHHHTSTTCSEEEEECTT--SCC-TTHHHHHHHHHSSCEEEH
T ss_pred HHHHHHHHHHHhhcCCCCCEEEEeCCC--Cch-hhhHHHHHHHhCCCEEeH
Confidence 3466666666 4 34689999998754 332 335566677778999543
No 396
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=68.16 E-value=38 Score=30.69 Aligned_cols=167 Identities=19% Similarity=0.254 Sum_probs=87.1
Q ss_pred CCCcCCCCccEEEEeecC--CCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeCChHHHHHHHHHcCcccee
Q psy9039 43 PPSVPVGVQHGVIVENMH--DVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQILSGCNKAALATAQAAGLDFIR 120 (251)
Q Consensus 43 ~~l~~~Gv~D~i~ieN~~--~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~~~~~~ia~a~g~~Fir 120 (251)
+.+.++|+ |.|.++.|- ..||+-. |+-. +.+ ++++++++.++ +|+..-.+- ..+....... .++++
T Consensus 163 ~~~k~aGa-~~vk~q~fkprts~~~f~---gl~~-egl-~~L~~~~~~~G--l~~~te~~d---~~~~~~l~~~-vd~lk 230 (385)
T 3nvt_A 163 ESIKAKGL-KLIRGGAFKPRTSPYDFQ---GLGL-EGL-KILKRVSDEYG--LGVISEIVT---PADIEVALDY-VDVIQ 230 (385)
T ss_dssp HHHHHTTC-CEEECBSSCCCSSTTSCC---CCTH-HHH-HHHHHHHHHHT--CEEEEECCS---GGGHHHHTTT-CSEEE
T ss_pred HHHHHcCC-CeEEcccccCCCChHhhc---CCCH-HHH-HHHHHHHHHcC--CEEEEecCC---HHHHHHHHhh-CCEEE
Confidence 45556899 999866542 1233221 2111 222 56677777777 788877654 2344444333 67777
Q ss_pred cccccccccCCCceeecCcchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhh---ccccEEEec--CC
Q psy9039 121 AESFVFGHMADEGLMNAQAGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASF---FLSDGLIIT--GN 195 (251)
Q Consensus 121 ~~~~~~~~~~~~Gli~~da~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~---~~~D~v~VT--G~ 195 (251)
++++.- ...+++++..+.+. .|-+ |.|.. -++.++...++. .|..-+++. |.
T Consensus 231 Igs~~~-----------~n~~LL~~~a~~gk-PVil------k~G~~-----~t~~e~~~Ave~i~~~Gn~~i~L~~rG~ 287 (385)
T 3nvt_A 231 IGARNM-----------QNFELLKAAGRVDK-PILL------KRGLS-----ATIEEFIGAAEYIMSQGNGKIILCERGI 287 (385)
T ss_dssp ECGGGT-----------TCHHHHHHHHTSSS-CEEE------ECCTT-----CCHHHHHHHHHHHHTTTCCCEEEEECCB
T ss_pred ECcccc-----------cCHHHHHHHHccCC-cEEE------ecCCC-----CCHHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 643221 12245555555553 2222 33331 356666555542 355433332 44
Q ss_pred CCCC-----CCCHHHHHHHHhcCCCCEEEe----cCCC---hH-hHHHhhc-CCEEEEeceEe
Q psy9039 196 ATGD-----PADVSQLMSVKNAVDLPILIG----SGVT---SD-NVEHYMT-ADALIIGSHFK 244 (251)
Q Consensus 196 ~~g~-----~~~~~~l~~vr~~~~~PV~vG----~GI~---~~-~v~~~~~-ADGvIVGS~~~ 244 (251)
++-. ..++..+..+|+.+.+||+.. .|-. +. -.+.+.- |||+++=..|-
T Consensus 288 s~yp~~~~~~ldl~~i~~lk~~~~lpV~~D~th~~G~r~~v~~~a~AAvA~GA~gl~iE~H~~ 350 (385)
T 3nvt_A 288 RTYEKATRNTLDISAVPILKKETHLPVMVDVTHSTGRKDLLLPCAKAALAIEADGVMAEVHPD 350 (385)
T ss_dssp CCSCCSSSSBCCTTHHHHHHHHBSSCEEEEHHHHHCCGGGHHHHHHHHHHTTCSEEEEEBCSC
T ss_pred CCCCCCCccccCHHHHHHHHHhcCCCEEEcCCCCCCccchHHHHHHHHHHhCCCEEEEEecCC
Confidence 4321 124667888898889999654 2221 11 1122223 99999876543
No 397
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=67.57 E-value=12 Score=32.70 Aligned_cols=52 Identities=17% Similarity=0.407 Sum_probs=37.5
Q ss_pred hhhccccEEEec-CCCCCC----CC-CHHHHHHHHhcCCCCEEEe--cCCChHhHHHhhc
Q psy9039 182 ASFFLSDGLIIT-GNATGD----PA-DVSQLMSVKNAVDLPILIG--SGVTSDNVEHYMT 233 (251)
Q Consensus 182 a~~~~~D~v~VT-G~~~g~----~~-~~~~l~~vr~~~~~PV~vG--~GI~~~~v~~~~~ 233 (251)
.+.-|+|.+-|+ |...|. +. +.+.|+++++.+++|+++= +|+..+++++..+
T Consensus 168 v~~TgvD~LAvaiGt~HG~Y~~~p~Ld~~~L~~I~~~v~vpLVlHGgSG~~~e~i~~ai~ 227 (288)
T 3q94_A 168 VEATGIDCLAPALGSVHGPYKGEPNLGFAEMEQVRDFTGVPLVLHGGTGIPTADIEKAIS 227 (288)
T ss_dssp HHHHCCSEEEECSSCBSSCCSSSCCCCHHHHHHHHHHHCSCEEECCCTTCCHHHHHHHHH
T ss_pred HHHHCCCEEEEEcCcccCCcCCCCccCHHHHHHHHHhcCCCEEEeCCCCCCHHHHHHHHH
Confidence 334589999774 543333 22 4688999999999999984 5667888988764
No 398
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=67.24 E-value=11 Score=33.67 Aligned_cols=91 Identities=7% Similarity=0.036 Sum_probs=57.6
Q ss_pred CcchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCCCCCC-CCHHHHHHHHhcCCCC
Q psy9039 138 QAGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNATGDP-ADVSQLMSVKNAVDLP 216 (251)
Q Consensus 138 da~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~g~~-~~~~~l~~vr~~~~~P 216 (251)
|.+.+...|+.+|. ++.+.-|.+-. + +.....+.++..+.++++.+- ...+ .+.+.++++|+.+++|
T Consensus 174 d~~~v~avR~~~g~-~~~l~vDan~~----~--~~~~a~~~~~~l~~~~i~~iE-----qP~~~~~~~~~~~l~~~~~iP 241 (370)
T 1chr_A 174 DLIHMEALSNSLGS-KAYLRVDVNQA----W--DEQVASVYIPELEALGVELIE-----QPVGRENTQALRRLSDNNRVA 241 (370)
T ss_dssp HHHHHHHHHHHSST-TCCEEEECTTC----C--CTTHHHHHTHHHHTTTEEEEE-----CCSCTTCHHHHHHHHHHSCSE
T ss_pred HHHHHHHHHHhcCC-CCEEEEECCCC----C--CHHHHHHHHHHHHhcCCCEEE-----CCCCcccHHHHHHHHhhCCCC
Confidence 44555667777774 56665554321 1 112223334444446666642 1122 3567889999999999
Q ss_pred EEEecCC-ChHhHHHhhc---CCEEEEe
Q psy9039 217 ILIGSGV-TSDNVEHYMT---ADALIIG 240 (251)
Q Consensus 217 V~vG~GI-~~~~v~~~~~---ADGvIVG 240 (251)
|+.+--+ +.+++.+++. +|.+.+-
T Consensus 242 ia~dE~~~~~~~~~~~~~~~~~d~v~~k 269 (370)
T 1chr_A 242 IMADESLSTLASAFDLARDRSVDVFSLK 269 (370)
T ss_dssp EEESSSCCSHHHHHHHHTTTSCSEEEEC
T ss_pred EEeCCCcCCHHHHHHHHHcCCCCEEEEC
Confidence 9999999 6889998884 8988764
No 399
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=67.21 E-value=8.5 Score=34.82 Aligned_cols=89 Identities=15% Similarity=0.124 Sum_probs=55.8
Q ss_pred cchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCCCCC-CCCHHHHHHHHhcCCCCE
Q psy9039 139 AGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNATGD-PADVSQLMSVKNAVDLPI 217 (251)
Q Consensus 139 a~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~g~-~~~~~~l~~vr~~~~~PV 217 (251)
.+-+...|+.+|. ++.+.-|.+- + + +.....+.++..+.++++.+- ... +.+.+.++++++.+++||
T Consensus 207 ~e~v~avR~avG~-d~~l~vDan~--~--~--~~~~ai~~~~~l~~~~i~~iE-----qP~~~~d~~~~~~l~~~~~iPI 274 (398)
T 2pp0_A 207 IRRLTAVREALGD-EFPLMVDANQ--Q--W--DRETAIRMGRKMEQFNLIWIE-----EPLDAYDIEGHAQLAAALDTPI 274 (398)
T ss_dssp HHHHHHHHHHHCS-SSCEEEECTT--C--S--CHHHHHHHHHHHGGGTCSCEE-----CCSCTTCHHHHHHHHHHCSSCE
T ss_pred HHHHHHHHHHcCC-CCeEEEECCC--C--C--CHHHHHHHHHHHHHcCCceee-----CCCChhhHHHHHHHHhhCCCCE
Confidence 3445556777774 5666544431 1 1 112223344444446777652 112 235788899999999999
Q ss_pred EEecCC-ChHhHHHhhc---CCEEEE
Q psy9039 218 LIGSGV-TSDNVEHYMT---ADALII 239 (251)
Q Consensus 218 ~vG~GI-~~~~v~~~~~---ADGvIV 239 (251)
+.+..+ +++.+.+++. +|.+.+
T Consensus 275 a~dE~~~~~~~~~~~i~~~~~d~v~i 300 (398)
T 2pp0_A 275 ATGEMLTSFREHEQLILGNASDFVQP 300 (398)
T ss_dssp EECTTCCSHHHHHHHHHTTCCSEECC
T ss_pred EecCCcCCHHHHHHHHHcCCCCEEEe
Confidence 999999 6899998873 888765
No 400
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=67.00 E-value=7.7 Score=33.73 Aligned_cols=88 Identities=11% Similarity=0.061 Sum_probs=51.2
Q ss_pred CCcchHHHHHHHHHhhCCCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeCChH
Q psy9039 26 EITANMTRLCAEIRKVLPPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQILSGCNK 105 (251)
Q Consensus 26 ~~~~~~~~i~~~a~~~a~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~~ 105 (251)
.|+++.-.-.+.|++.++.+++.|+ |.|-|-=|=-.|.+.++...-++ +-+.-+++++++ .+ +|+-+.+|... +
T Consensus 20 FsDGG~~~~~~~a~~~a~~m~~~GA-diIDIGgeSTRPga~~vs~eeE~-~Rv~pvi~~l~~-~~--v~iSIDT~~~~-V 93 (270)
T 4hb7_A 20 FSDGGKFNNVETAINRVKAMIDEGA-DIIDVGGVSTRPGHEMVTLEEEL-NRVLPVVEAIVG-FD--VKISVDTFRSE-V 93 (270)
T ss_dssp -------CHHHHHHHHHHHHHHTTC-SEEEEESCCCSTTCCCCCHHHHH-HHHHHHHHHHTT-SS--SEEEEECSCHH-H
T ss_pred CCCCCCCCCHHHHHHHHHHHHHCCC-CEEEECCccCCCCCCCCchHHHH-HHHHHHHHHhhc-CC--CeEEEECCCHH-H
Confidence 4454322223455666677889999 99987544446887775322222 123335677764 45 79999998743 4
Q ss_pred HHHHHHHHcCccceec
Q psy9039 106 AALATAQAAGLDFIRA 121 (251)
Q Consensus 106 ~~~~ia~a~g~~Fir~ 121 (251)
+..|...|++.+-+
T Consensus 94 --a~~al~aGa~iIND 107 (270)
T 4hb7_A 94 --AEACLKLGVDMIND 107 (270)
T ss_dssp --HHHHHHHTCCEEEE
T ss_pred --HHHHHHhccceecc
Confidence 44455678888774
No 401
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=66.95 E-value=29 Score=30.00 Aligned_cols=172 Identities=13% Similarity=0.077 Sum_probs=77.0
Q ss_pred CCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeCChHHHHHHH---HHcCccce
Q psy9039 43 PPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQILSGCNKAALATA---QAAGLDFI 119 (251)
Q Consensus 43 ~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~~~~~~ia---~a~g~~Fi 119 (251)
+-|++.|+ |||.+ +|.-=. .--.+.+--.++++.+.+.....+|+.+-+-.|....+...+ ...|++.+
T Consensus 31 ~~li~~Gv-~gl~~---~GttGE----~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadav 102 (294)
T 3b4u_A 31 RRCLSNGC-DSVTL---FGTTGE----GCSVGSRERQAILSSFIAAGIAPSRIVTGVLVDSIEDAADQSAEALNAGARNI 102 (294)
T ss_dssp HHHHHTTC-SEEEE---SSTTTT----GGGSCHHHHHHHHHHHHHTTCCGGGEEEEECCSSHHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHcCC-CEEEE---CccccC----hhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCccHHHHHHHHHHHHhcCCCEE
Confidence 55678899 99986 332000 001122223345555555443336888888777644444333 33455544
Q ss_pred ecccccccccCCCceee-cCcchhHHHHHhcCC-C---cchh-hhhhHhhccCCCCCCcccHHHHHHHh-hhccccEEEe
Q psy9039 120 RAESFVFGHMADEGLMN-AQAGPLLRYRKQIGA-D---NVLV-FTDIKKKHSSHAITADVDITETAKAA-SFFLSDGLII 192 (251)
Q Consensus 120 r~~~~~~~~~~~~Gli~-~da~e~~~~r~~l~~-~---~i~i-~a~v~~k~~~~~~~~~~~i~~~a~~a-~~~~~D~v~V 192 (251)
-.- ..-... +..+++.++.+.+-. - ++.+ ++++-...|.. .+.+.+.+.+ +.-.- |
T Consensus 103 lv~--------~P~y~~~~s~~~l~~~f~~va~a~p~~~lPiilYn~P~~tg~~-----l~~~~~~~La~~~pn~----i 165 (294)
T 3b4u_A 103 LLA--------PPSYFKNVSDDGLFAWFSAVFSKIGKDARDILVYNIPSVTMVT-----LSVELVGRLKAAFPGI----V 165 (294)
T ss_dssp EEC--------CCCSSCSCCHHHHHHHHHHHHHHHCTTCCCEEEEECHHHHSCC-----CCHHHHHHHHHHCTTT----E
T ss_pred EEc--------CCcCCCCCCHHHHHHHHHHHHHhcCCCCCcEEEEECcchhCcC-----CCHHHHHHHHHhCCCc----E
Confidence 321 111122 344555555444311 0 2233 33332233433 2333333433 22110 2
Q ss_pred cCCCCCCCCCHHHHHHHHhcC-CCCEEEecCCChHhHHHhhc-CCEEEEece
Q psy9039 193 TGNATGDPADVSQLMSVKNAV-DLPILIGSGVTSDNVEHYMT-ADALIIGSH 242 (251)
Q Consensus 193 TG~~~g~~~~~~~l~~vr~~~-~~PV~vG~GI~~~~v~~~~~-ADGvIVGS~ 242 (251)
.|-+. ...+...+.++++.+ +..|+.|. ..--+..+.. ++|+|-|++
T Consensus 166 vgiKd-s~gd~~~~~~~~~~~~~f~v~~G~--d~~~l~~l~~G~~G~is~~~ 214 (294)
T 3b4u_A 166 TGVKD-SSGNWSHTERLLKEHGDLAILIGD--ERDLARGVRLGGQGAISGVA 214 (294)
T ss_dssp EEEEE-CCCCHHHHHHHHHHHTTSEEEECC--HHHHHHHHHTTCCEEEESGG
T ss_pred EEEEE-CCCCHHHHHHHHHhCCCeEEEEcc--HHHHHHHHHCCCCEEEeCHH
Confidence 22221 122456666665544 45555443 2222333334 999998865
No 402
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=66.81 E-value=34 Score=29.66 Aligned_cols=170 Identities=12% Similarity=0.064 Sum_probs=74.2
Q ss_pred CCCcCCCCccEEEEeecCC-CCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeCChHHHHHHH---HHcCccc
Q psy9039 43 PPSVPVGVQHGVIVENMHD-VPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQILSGCNKAALATA---QAAGLDF 118 (251)
Q Consensus 43 ~~l~~~Gv~D~i~ieN~~~-~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~~~~~~ia---~a~g~~F 118 (251)
+-|++.|+ |||.+.=-.| .|.- .-.+..+-+..+++.++. . +|+.+.+-.|....+...+ ...|++.
T Consensus 39 ~~li~~Gv-~Gl~v~GtTGE~~~L----s~eEr~~v~~~~~~~~~g--r--vpViaGvg~~~t~~ai~la~~A~~~Gada 109 (303)
T 2wkj_A 39 QFNIQQGI-DGLYVGGSTGEAFVQ----SLSEREQVLEIVAEEAKG--K--IKLIAHVGCVSTAESQQLAASAKRYGFDA 109 (303)
T ss_dssp HHHHHTTC-SEEEESSTTTTGGGS----CHHHHHHHHHHHHHHHTT--T--SEEEEECCCSSHHHHHHHHHHHHHHTCSE
T ss_pred HHHHHcCC-CEEEECeeccChhhC----CHHHHHHHHHHHHHHhCC--C--CcEEEecCCCCHHHHHHHHHHHHhCCCCE
Confidence 55678999 9998621111 2111 122333333333333322 2 6888877776643443332 3345544
Q ss_pred eecccccccccCCCceeecCcchhHHHHHhcCC-Cc-chh-hhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCC
Q psy9039 119 IRAESFVFGHMADEGLMNAQAGPLLRYRKQIGA-DN-VLV-FTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGN 195 (251)
Q Consensus 119 ir~~~~~~~~~~~~Gli~~da~e~~~~r~~l~~-~~-i~i-~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~ 195 (251)
+-.- ..-...+..+++.++.+.+-. -+ +.+ ++++-...|.. .+.+.+.+.++.-. |.|-
T Consensus 110 vlv~--------~P~y~~~s~~~l~~~f~~va~a~~~lPiilYn~P~~tg~~-----l~~~~~~~La~~pn-----Ivgi 171 (303)
T 2wkj_A 110 VSAV--------TPFYYPFSFEEHCDHYRAIIDSADGLPMVVYNIPALSGVK-----LTLDQINTLVTLPG-----VGAL 171 (303)
T ss_dssp EEEE--------CCCSSCCCHHHHHHHHHHHHHHHTTCCEEEEECHHHHCCC-----CCHHHHHHHHTSTT-----EEEE
T ss_pred EEec--------CCCCCCCCHHHHHHHHHHHHHhCCCCCEEEEeCccccCCC-----CCHHHHHHHhcCCC-----EEEE
Confidence 3321 111122334555555544321 01 222 33333233433 23344444443211 2222
Q ss_pred CCCCCCCHHHHHHHHhcC-CCCEEEecCCChHhHHHhhc-CCEEEEece
Q psy9039 196 ATGDPADVSQLMSVKNAV-DLPILIGSGVTSDNVEHYMT-ADALIIGSH 242 (251)
Q Consensus 196 ~~g~~~~~~~l~~vr~~~-~~PV~vG~GI~~~~v~~~~~-ADGvIVGS~ 242 (251)
+.. ..+...+.++++.. +..|+.|. ..--+..+.. ++|+|-|++
T Consensus 172 K~s-~gd~~~~~~~~~~~~~f~v~~G~--d~~~~~~l~~G~~G~is~~a 217 (303)
T 2wkj_A 172 XQT-SGDLYQMEQIRREHPDLVLYNGY--DNIFASGLLAGADGGIGSTY 217 (303)
T ss_dssp EEC-CCCHHHHHHHHHHCTTCEEEECC--GGGHHHHHHHTCCEEEETTH
T ss_pred eCC-CCCHHHHHHHHHhCCCeEEEeCc--HHHHHHHHHCCCCEEEeCHH
Confidence 211 12455566655442 44455443 2222333334 999998864
No 403
>3mkc_A Racemase; metabolic process, PSI2, NYSGXRC, structu genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.77A {Pseudovibrio SP} PDB: 3nzg_A
Probab=66.68 E-value=5.5 Score=36.12 Aligned_cols=91 Identities=14% Similarity=-0.035 Sum_probs=56.7
Q ss_pred CcchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCCCCC-CCCHHHHHHHHhcCCCC
Q psy9039 138 QAGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNATGD-PADVSQLMSVKNAVDLP 216 (251)
Q Consensus 138 da~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~g~-~~~~~~l~~vr~~~~~P 216 (251)
|.+.+...|+.+|. ++.+.-|.+. + + ++.....+.++..+.++++.+- ... +.+.+.++++|+.+++|
T Consensus 191 d~e~v~avR~a~G~-d~~l~vDaN~--~--~-~~~~~A~~~~~~L~~~~i~~iE-----eP~~~~d~~~~~~l~~~~~iP 259 (394)
T 3mkc_A 191 VAYYLRELRGILGH-DTDMMVDYLY--R--F-TDWYEVARLLNSIEDLELYFAE-----ATLQHDDLSGHAKLVENTRSR 259 (394)
T ss_dssp HHHHHHHHHHHHCS-SSEEEEECTT--C--C-CCHHHHHHHHHHTGGGCCSEEE-----SCSCTTCHHHHHHHHHHCSSC
T ss_pred HHHHHHHHHHHhCC-CCeEEEeCCC--C--C-CCHHHHHHHHHHhhhcCCeEEE-----CCCCchhHHHHHHHHhhCCCC
Confidence 34555667888874 5666544431 1 1 0112222333444446777752 112 23578889999999999
Q ss_pred EEEecCC-ChHhHHHhhc---CCEEEE
Q psy9039 217 ILIGSGV-TSDNVEHYMT---ADALII 239 (251)
Q Consensus 217 V~vG~GI-~~~~v~~~~~---ADGvIV 239 (251)
|+.+..+ +++++.+++. +|.+.+
T Consensus 260 Ia~dE~~~~~~~~~~~l~~~~~d~v~~ 286 (394)
T 3mkc_A 260 ICGAEMSTTRFEAEEWITKGKVHLLQS 286 (394)
T ss_dssp BEECTTCCHHHHHHHHHHTTCCSEECC
T ss_pred EEeCCCCCCHHHHHHHHHcCCCCeEec
Confidence 9999999 5788988883 888765
No 404
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=66.47 E-value=18 Score=31.07 Aligned_cols=70 Identities=19% Similarity=0.245 Sum_probs=46.7
Q ss_pred HHHhhhccccEEEecCC--CCCCCCCHHHHHHHHhcCCCCEEE-----ecCC--ChHhHH-------Hhhc--CCEEEEe
Q psy9039 179 AKAASFFLSDGLIITGN--ATGDPADVSQLMSVKNAVDLPILI-----GSGV--TSDNVE-------HYMT--ADALIIG 240 (251)
Q Consensus 179 a~~a~~~~~D~v~VTG~--~~g~~~~~~~l~~vr~~~~~PV~v-----G~GI--~~~~v~-------~~~~--ADGvIVG 240 (251)
+..|...|+|.+-.-.. .-|..|+...++.+++.+++||.+ |++- +.+.+. .+.+ |||+++|
T Consensus 14 a~~A~~~GAdRIELc~~L~~GGlTPS~g~i~~~~~~~~ipv~vMIRPR~GdF~Ys~~E~~~M~~Di~~~~~~GadGvV~G 93 (256)
T 1twd_A 14 ALTAQQNGADRVELCAAPKEGGLTPSLGVLKSVRQRVTIPVHPIIRPRGGDFCYSDGEFAAILEDVRTVRELGFPGLVTG 93 (256)
T ss_dssp HHHHHHTTCSEEEECBCGGGTCBCCCHHHHHHHHHHCCSCEEEBCCSSSSCSCCCHHHHHHHHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHcCCCEEEEcCCcccCCCCCCHHHHHHHHHHcCCceEEEECCCCCCCcCCHHHHHHHHHHHHHHHHcCCCEEEEe
Confidence 45566678888855432 334567788999999999999987 5554 655444 3333 9999999
Q ss_pred ceEeecCee
Q psy9039 241 SHFKQGGRT 249 (251)
Q Consensus 241 S~~~~~g~~ 249 (251)
- |-.||.+
T Consensus 94 ~-Lt~dg~i 101 (256)
T 1twd_A 94 V-LDVDGNV 101 (256)
T ss_dssp C-BCTTSSB
T ss_pred e-ECCCCCc
Confidence 4 3445543
No 405
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=66.27 E-value=26 Score=30.86 Aligned_cols=77 Identities=12% Similarity=0.138 Sum_probs=39.5
Q ss_pred cchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCCCCCC-C-CH-HHHHHHHhcCC-
Q psy9039 139 AGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNATGDP-A-DV-SQLMSVKNAVD- 214 (251)
Q Consensus 139 a~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~g~~-~-~~-~~l~~vr~~~~- 214 (251)
..+..++.++.+. .+.+-+. .+.. ++...+.++++.+...|+|.+.+--+- |.. | .. ++++.+|+.++
T Consensus 124 ~~~~v~~a~~~g~-~v~f~~~----d~~~--~~~~~~~~~~~~~~~~G~~~i~l~DT~-G~~~P~~v~~lv~~l~~~~~~ 195 (325)
T 3eeg_A 124 AVAAVKQAKKVVH-EVEFFCE----DAGR--ADQAFLARMVEAVIEAGADVVNIPDTT-GYMLPWQYGERIKYLMDNVSN 195 (325)
T ss_dssp THHHHHHHHTTSS-EEEEEEE----TGGG--SCHHHHHHHHHHHHHHTCSEEECCBSS-SCCCHHHHHHHHHHHHHHCSC
T ss_pred HHHHHHHHHHCCC-EEEEEcc----cccc--chHHHHHHHHHHHHhcCCCEEEecCcc-CCcCHHHHHHHHHHHHHhCCC
Confidence 4456666777664 2222111 1111 233445555666555799988775543 332 2 23 66778888764
Q ss_pred CC-EEEecCC
Q psy9039 215 LP-ILIGSGV 223 (251)
Q Consensus 215 ~P-V~vG~GI 223 (251)
.| +-+++=.
T Consensus 196 ~~~~~i~~H~ 205 (325)
T 3eeg_A 196 IDKAILSAHC 205 (325)
T ss_dssp GGGSEEEECB
T ss_pred CCceEEEEEe
Confidence 11 4455443
No 406
>3vcn_A Mannonate dehydratase; enolase, magnesium binding site, enzyme function initiative, lyase; 1.45A {Caulobacter crescentus} PDB: 4gme_A* 4fi4_A 3thu_A
Probab=66.25 E-value=5.6 Score=36.51 Aligned_cols=89 Identities=13% Similarity=0.188 Sum_probs=55.9
Q ss_pred cchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCCCCCC-CCHHHHHHHHhcCCCCE
Q psy9039 139 AGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNATGDP-ADVSQLMSVKNAVDLPI 217 (251)
Q Consensus 139 a~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~g~~-~~~~~l~~vr~~~~~PV 217 (251)
.+-+...|+.+|. ++.+.-|.+-. + +.....+.++..+.++++.+- ...+ .+.+.++++|+.+++||
T Consensus 214 ~e~v~avR~a~G~-d~~l~vDaN~~----~--~~~~A~~~~~~L~~~~i~~iE-----qP~~~~d~~~~~~l~~~~~iPI 281 (425)
T 3vcn_A 214 PKLFERAREVLGW-DVHLLHDVHHR----L--TPIEAARLGKDLEPYRLFWLE-----DSVPAENQAGFRLIRQHTTTPL 281 (425)
T ss_dssp HHHHHHHHHHHCS-SSEEEEECTTC----C--CHHHHHHHHHHHGGGCCSEEE-----CCSCCSSTTHHHHHHHHCCSCE
T ss_pred HHHHHHHHHHcCC-CCEEEEECCCC----C--CHHHHHHHHHHHHhcCCCEEE-----CCCChhhHHHHHHHHhcCCCCE
Confidence 3445567888874 66666554311 1 112222333444446777762 1122 24677889999999999
Q ss_pred EEecCC-ChHhHHHhhc---CCEEEE
Q psy9039 218 LIGSGV-TSDNVEHYMT---ADALII 239 (251)
Q Consensus 218 ~vG~GI-~~~~v~~~~~---ADGvIV 239 (251)
+.+.-+ +++++.++++ +|.+.+
T Consensus 282 a~dE~~~~~~~~~~~i~~~a~d~v~~ 307 (425)
T 3vcn_A 282 AVGEIFAHVWDAKQLIEEQLIDYLRA 307 (425)
T ss_dssp EECTTCCSGGGTHHHHHTTCCSEECC
T ss_pred EeCCCcCCHHHHHHHHHcCCCCeEec
Confidence 999999 6888888883 888764
No 407
>3sbf_A Mandelate racemase / muconate lactonizing enzyme; enolase fold, acid sugar dehydratase, D-araninonate, isomera; HET: EPE D8T; 1.50A {Vibrionales bacterium swat-3} PDB: 3r25_A 3dfh_A 4gis_A 4gir_A 4ggh_A 3gy1_A
Probab=65.85 E-value=7.2 Score=35.40 Aligned_cols=89 Identities=10% Similarity=0.126 Sum_probs=55.7
Q ss_pred chhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCCCCCC-CCHHHHHHHHhcCCCCEE
Q psy9039 140 GPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNATGDP-ADVSQLMSVKNAVDLPIL 218 (251)
Q Consensus 140 ~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~g~~-~~~~~l~~vr~~~~~PV~ 218 (251)
+-+...|+.+|. ++.+.-|.+-. + +.....+.++..+.++++.+- ...+ .+.+.++++|+.+++||+
T Consensus 189 ~~v~avR~a~G~-d~~l~vDan~~----~--~~~~A~~~~~~L~~~~i~~iE-----qP~~~~~~~~~~~l~~~~~iPIa 256 (401)
T 3sbf_A 189 TMFKSLREKYGN-QFHILHDVHER----L--FPNQAIQFAKEVEQYKPYFIE-----DILPPNQTEWLDNIRSQSSVSLG 256 (401)
T ss_dssp HHHHHHHHHHTT-SSEEEEECTTC----S--CHHHHHHHHHHHGGGCCSCEE-----CSSCTTCGGGHHHHHTTCCCCEE
T ss_pred HHHHHHHHHcCC-CCEEEEECCCC----C--CHHHHHHHHHHHHhcCCCEEE-----CCCChhHHHHHHHHHhhCCCCEE
Confidence 335567788874 66666554411 1 112222333444446676652 1122 246778999999999999
Q ss_pred EecCC-ChHhHHHhhc---CCEEEEe
Q psy9039 219 IGSGV-TSDNVEHYMT---ADALIIG 240 (251)
Q Consensus 219 vG~GI-~~~~v~~~~~---ADGvIVG 240 (251)
.+--+ +++++.++++ +|.+.+-
T Consensus 257 ~dE~~~~~~~~~~~i~~~~~d~v~~k 282 (401)
T 3sbf_A 257 LGELFNNPEEWKSLIANRRIDFIRCH 282 (401)
T ss_dssp ECTTCCSHHHHHHHHHTTCCSEECCC
T ss_pred eCCccCCHHHHHHHHhcCCCCEEecC
Confidence 99999 6899998883 8887653
No 408
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=65.85 E-value=9.4 Score=34.11 Aligned_cols=91 Identities=15% Similarity=0.165 Sum_probs=55.9
Q ss_pred CcchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCCCCCC-CCHHHHHHHHhcCCCC
Q psy9039 138 QAGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNATGDP-ADVSQLMSVKNAVDLP 216 (251)
Q Consensus 138 da~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~g~~-~~~~~l~~vr~~~~~P 216 (251)
|.+.+...|+.+|. ++.+.-|.+- + + +.....+.++..+.++++.+- ...+ .+.+.++++|+.+++|
T Consensus 171 d~~~v~avR~a~g~-~~~l~vDan~--~--~--~~~~a~~~~~~l~~~~i~~iE-----qP~~~~d~~~~~~l~~~~~iP 238 (367)
T 3dg3_A 171 DTAVVRALRERFGD-AIELYVDGNR--G--W--SAAESLRAMREMADLDLLFAE-----ELCPADDVLSRRRLVGQLDMP 238 (367)
T ss_dssp HHHHHHHHHHHHGG-GSEEEEECTT--C--S--CHHHHHHHHHHTTTSCCSCEE-----SCSCTTSHHHHHHHHHHCSSC
T ss_pred HHHHHHHHHHHhCC-CCEEEEECCC--C--C--CHHHHHHHHHHHHHhCCCEEE-----CCCCcccHHHHHHHHHhCCCC
Confidence 34445566777763 5666544431 1 1 112222333333445666642 1122 2567888999999999
Q ss_pred EEEecCC-ChHhHHHhhc---CCEEEEe
Q psy9039 217 ILIGSGV-TSDNVEHYMT---ADALIIG 240 (251)
Q Consensus 217 V~vG~GI-~~~~v~~~~~---ADGvIVG 240 (251)
|+.+..+ +++++.+++. +|.+.+=
T Consensus 239 Ia~dE~~~~~~~~~~~i~~~~~d~v~~k 266 (367)
T 3dg3_A 239 FIADESVPTPADVTREVLGGSATAISIK 266 (367)
T ss_dssp EEECTTCSSHHHHHHHHHHTSCSEEEEC
T ss_pred EEecCCcCCHHHHHHHHHcCCCCEEEee
Confidence 9999999 6888888773 8988763
No 409
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=65.48 E-value=34 Score=29.45 Aligned_cols=39 Identities=21% Similarity=0.092 Sum_probs=21.6
Q ss_pred CHHHHHHHHhcC-CCCEEEecCCChHhHHHhhc-CCEEEEece
Q psy9039 202 DVSQLMSVKNAV-DLPILIGSGVTSDNVEHYMT-ADALIIGSH 242 (251)
Q Consensus 202 ~~~~l~~vr~~~-~~PV~vG~GI~~~~v~~~~~-ADGvIVGS~ 242 (251)
+...+.++++.. +.-|+.|. ..--+..+.. ++|+|-|++
T Consensus 169 d~~~~~~~~~~~~~f~v~~G~--d~~~~~~l~~G~~G~is~~~ 209 (293)
T 1f6k_A 169 DFYLLERLKKAYPNHLIWAGF--DEMMLPAASLGVDGAIGSTF 209 (293)
T ss_dssp CHHHHHHHHHHCTTSEEEECC--GGGHHHHHHTTCSEEEESTH
T ss_pred CHHHHHHHHHhCCCeEEEECc--HHHHHHHHHCCCcEEEeCHH
Confidence 456666666543 34444443 3322333334 999998864
No 410
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=65.40 E-value=10 Score=32.51 Aligned_cols=59 Identities=12% Similarity=0.136 Sum_probs=35.5
Q ss_pred cchHHHHHHHHHhhCCCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEee
Q psy9039 28 TANMTRLCAEIRKVLPPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQILS 101 (251)
Q Consensus 28 ~~~~~~i~~~a~~~a~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~ 101 (251)
..+.+++++.+.+ +.+.|+ |.||+ -+=|-.. +.........+.++|+...+ .|+.+- ++
T Consensus 28 ~~t~~e~l~~a~~----~~~~~a-D~vEl----R~D~l~~----~~~~~~v~~~l~~lr~~~~~-lPiI~T-~R 86 (258)
T 4h3d_A 28 GKNKKDIIKEAKE----LKDACL-DIIEW----RVDFFEN----VENIKEVKEVLYELRSYIHD-IPLLFT-FR 86 (258)
T ss_dssp CSSHHHHHHHHHH----HTTSSC-SEEEE----EGGGCTT----TTCHHHHHHHHHHHHHHCTT-SCEEEE-CC
T ss_pred CCCHHHHHHHHHH----HhhcCC-CEEEE----eeccccc----cCCHHHHHHHHHHHHHhcCC-CCEEEE-Ee
Confidence 4577777666554 456799 99975 3323221 12234566778888887654 486544 44
No 411
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=65.30 E-value=40 Score=29.01 Aligned_cols=172 Identities=15% Similarity=0.142 Sum_probs=76.4
Q ss_pred CCCcCCCCccEEEEe-ecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeCChHHHHHH---HHHcCccc
Q psy9039 43 PPSVPVGVQHGVIVE-NMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQILSGCNKAALAT---AQAAGLDF 118 (251)
Q Consensus 43 ~~l~~~Gv~D~i~ie-N~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~~~~~~i---a~a~g~~F 118 (251)
+-|+++|+ |||.+- .-+-.|.- .-.+.. ++++.+.+.....+|+.+.+-.|....+... |...|++.
T Consensus 30 ~~li~~Gv-~gl~v~GttGE~~~L----t~~Er~----~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gada 100 (292)
T 3daq_A 30 NFLLENNA-QAIIVNGTTAESPTL----TTDEKE----LILKTVIDLVDKRVPVIAGTGTNDTEKSIQASIQAKALGADA 100 (292)
T ss_dssp HHHHHTTC-CEEEESSGGGTGGGS----CHHHHH----HHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCSE
T ss_pred HHHHHcCC-CEEEECccccccccC----CHHHHH----HHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHHcCCCE
Confidence 45678999 999862 11111111 112222 3333333332222688888776664444433 23344444
Q ss_pred eecccccccccCCCceeecCcchhHHHHHhcCC-Ccchh-hhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCC
Q psy9039 119 IRAESFVFGHMADEGLMNAQAGPLLRYRKQIGA-DNVLV-FTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNA 196 (251)
Q Consensus 119 ir~~~~~~~~~~~~Gli~~da~e~~~~r~~l~~-~~i~i-~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~ 196 (251)
+-.- ..-...+..+++.++.+.+-. -++.+ ++++-...+.. .+.+.+.+.++.-. .+ |-+
T Consensus 101 vlv~--------~P~y~~~~~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~-----l~~~~~~~La~~pn--iv---giK 162 (292)
T 3daq_A 101 IMLI--------TPYYNKTNQRGLVKHFEAIADAVKLPVVLYNVPSRTNMT-----IEPETVEILSQHPY--IV---ALK 162 (292)
T ss_dssp EEEE--------CCCSSCCCHHHHHHHHHHHHHHHCSCEEEEECHHHHSCC-----CCHHHHHHHHTSTT--EE---EEE
T ss_pred EEEC--------CCCCCCCCHHHHHHHHHHHHHhCCCCEEEEecccccCCC-----CCHHHHHHHhcCCC--EE---EEE
Confidence 3321 111112234555555544421 12222 33333233443 23444444444211 11 222
Q ss_pred CCCCCCHHHHHHHHhcCCC-CEEEecCCChHhHHHhhc-CCEEEEece
Q psy9039 197 TGDPADVSQLMSVKNAVDL-PILIGSGVTSDNVEHYMT-ADALIIGSH 242 (251)
Q Consensus 197 ~g~~~~~~~l~~vr~~~~~-PV~vG~GI~~~~v~~~~~-ADGvIVGS~ 242 (251)
. ...++..+.++++.++- ...+=+|-..--+..+.. ++|+|-|++
T Consensus 163 ~-ssgd~~~~~~~~~~~~~~~f~v~~G~d~~~~~~l~~G~~G~is~~~ 209 (292)
T 3daq_A 163 D-ATNDFEYLEEVKKRIDTNSFALYSGNDDNVVEYYQRGGQGVISVIA 209 (292)
T ss_dssp E-CCCCHHHHHHHHTTSCTTTSEEEESCGGGHHHHHHTTCCEEEESGG
T ss_pred e-CCCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHhcCCCEEEeCHH
Confidence 1 12257777777766532 233333443333444445 999998864
No 412
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=65.28 E-value=4.9 Score=36.71 Aligned_cols=89 Identities=11% Similarity=0.049 Sum_probs=54.9
Q ss_pred cchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCCCCCC-CCHHHHHHHHhcCCCCE
Q psy9039 139 AGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNATGDP-ADVSQLMSVKNAVDLPI 217 (251)
Q Consensus 139 a~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~g~~-~~~~~l~~vr~~~~~PV 217 (251)
.+.+...|+.+|. ++.+.-|.+- + + +.....+.++..+.++++.+- ...+ .+.+.++++|+.+++||
T Consensus 165 ~e~v~avR~avG~-d~~L~vDaN~--~--~--~~~~A~~~~~~L~~~~i~~iE-----eP~~~~d~~~~~~l~~~~~iPI 232 (405)
T 3rr1_A 165 VARVAEIRSAFGN-TVEFGLDFHG--R--V--SAPMAKVLIKELEPYRPLFIE-----EPVLAEQAETYARLAAHTHLPI 232 (405)
T ss_dssp HHHHHHHHHTTGG-GSEEEEECCS--C--B--CHHHHHHHHHHHGGGCCSCEE-----CSSCCSSTHHHHHHHTTCSSCE
T ss_pred HHHHHHHHHHhCC-CceEEEECCC--C--C--CHHHHHHHHHHHHhcCCCEEE-----CCCCcccHHHHHHHHhcCCCCE
Confidence 3445556777763 6666544331 1 1 111222233333446776652 1122 35688999999999999
Q ss_pred EEecCC-ChHhHHHhhc---CCEEEE
Q psy9039 218 LIGSGV-TSDNVEHYMT---ADALII 239 (251)
Q Consensus 218 ~vG~GI-~~~~v~~~~~---ADGvIV 239 (251)
+.+.-+ +++++.++++ +|.+.+
T Consensus 233 a~dE~i~~~~~~~~~l~~~a~d~v~~ 258 (405)
T 3rr1_A 233 AAGERMFSRFDFKRVLEAGGVSILQP 258 (405)
T ss_dssp EECTTCCSHHHHHHHHHHCCCSEECC
T ss_pred EecCCcCCHHHHHHHHHHhCCCeEEE
Confidence 999999 6889988883 888764
No 413
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=65.25 E-value=6.6 Score=35.35 Aligned_cols=39 Identities=10% Similarity=0.225 Sum_probs=34.0
Q ss_pred CHHHHHHHHhcCCCCEEEecCC-ChHhHHHhh--c-CCEEEEe
Q psy9039 202 DVSQLMSVKNAVDLPILIGSGV-TSDNVEHYM--T-ADALIIG 240 (251)
Q Consensus 202 ~~~~l~~vr~~~~~PV~vG~GI-~~~~v~~~~--~-ADGvIVG 240 (251)
+.+.++++|+.+++||+.+.-+ +++++.+++ . +|.+.+.
T Consensus 225 ~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~ik 267 (378)
T 3eez_A 225 TLDDIAAIRPLHSAPVSVDECLVTLQDAARVARDGLAEVFGIK 267 (378)
T ss_dssp SHHHHHHTGGGCCCCEEECTTCCSHHHHHHHHHTTCCSEEEEE
T ss_pred CHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHcCCCCEEEeC
Confidence 6788899999999999999999 689999888 3 8998875
No 414
>3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans}
Probab=65.20 E-value=8.7 Score=34.45 Aligned_cols=90 Identities=16% Similarity=0.223 Sum_probs=56.8
Q ss_pred CcchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCCCCCC-CCHHHHHHHHhcCCCC
Q psy9039 138 QAGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNATGDP-ADVSQLMSVKNAVDLP 216 (251)
Q Consensus 138 da~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~g~~-~~~~~l~~vr~~~~~P 216 (251)
|.+.+...|+.+| +++.+.-|.+-. + +.....+.++..+.++++.+- ...+ .+.+.++++|+.+++|
T Consensus 177 d~~~v~avR~~~g-~~~~l~vDan~~----~--~~~~A~~~~~~l~~~~i~~iE-----qP~~~~d~~~~~~l~~~~~ip 244 (377)
T 3my9_A 177 ELRILETMRGEFG-ERIDLRLDFNQA----L--TPFGAMKILRDVDAFRPTFIE-----QPVPRRHLDAMAGFAAALDTP 244 (377)
T ss_dssp HHHHHHHHHHHHG-GGSEEEEECTTC----C--CTTTHHHHHHHHHTTCCSCEE-----CCSCTTCHHHHHHHHHHCSSC
T ss_pred HHHHHHHHHHHhC-CCCeEEEeCCCC----c--CHHHHHHHHHHHhhcCCCEEE-----CCCCccCHHHHHHHHHhCCCC
Confidence 3444556677776 356665454322 1 122333445555545666652 1122 2578899999999999
Q ss_pred EEEecCC-ChHhHHHhhc---CCEEEE
Q psy9039 217 ILIGSGV-TSDNVEHYMT---ADALII 239 (251)
Q Consensus 217 V~vG~GI-~~~~v~~~~~---ADGvIV 239 (251)
|+.+--+ +++++.+++. +|.+.+
T Consensus 245 Ia~dE~~~~~~~~~~~i~~~~~d~v~~ 271 (377)
T 3my9_A 245 ILADESCFDAVDLMEVVRRQAADAISV 271 (377)
T ss_dssp EEESTTCSSHHHHHHHHHHTCCSEEEC
T ss_pred EEECCccCCHHHHHHHHHcCCCCEEEe
Confidence 9999999 6888988873 888865
No 415
>3dip_A Enolase; structural genomics, isomerase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, NYSGXRC, lyase; HET: SIC; 2.50A {Unidentified}
Probab=65.12 E-value=16 Score=33.31 Aligned_cols=91 Identities=9% Similarity=0.169 Sum_probs=56.9
Q ss_pred cchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCCC-CCCCCHHHHHHHHhcCCCCE
Q psy9039 139 AGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNAT-GDPADVSQLMSVKNAVDLPI 217 (251)
Q Consensus 139 a~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~-g~~~~~~~l~~vr~~~~~PV 217 (251)
.+.+...|+.+|. ++.+.-|.+-. + +.....+.++..+.++++.+-- . -.+.+.+.++++|+.+++||
T Consensus 200 ~e~v~avR~a~g~-d~~l~vDaN~~----~--~~~~A~~~~~~L~~~~i~~iEq----P~~~~~~~~~~~~l~~~~~iPI 268 (410)
T 3dip_A 200 LEPFRKIRAAVGQ-RIEIMCELHSL----W--GTHAAARICNALADYGVLWVED----PIAKMDNIPAVADLRRQTRAPI 268 (410)
T ss_dssp HHHHHHHHHHHTT-SSEEEEECTTC----B--CHHHHHHHHHHGGGGTCSEEEC----CBSCTTCHHHHHHHHHHHCCCE
T ss_pred HHHHHHHHHHcCC-CceEEEECCCC----C--CHHHHHHHHHHHHhcCCCEEEC----CCCCcccHHHHHHHHhhCCCCE
Confidence 3445567788874 66666554411 1 1112222333334467776531 1 01225788899999999999
Q ss_pred EEecCC-ChHhHHHhhc---CCEEEEe
Q psy9039 218 LIGSGV-TSDNVEHYMT---ADALIIG 240 (251)
Q Consensus 218 ~vG~GI-~~~~v~~~~~---ADGvIVG 240 (251)
+.+--+ +++++.++++ +|.+.+-
T Consensus 269 a~dE~~~~~~~~~~~l~~~~~d~v~~k 295 (410)
T 3dip_A 269 CGGENLAGTRRFHEMLCADAIDFVMLD 295 (410)
T ss_dssp EECTTCCSHHHHHHHHHTTCCSEEEEC
T ss_pred EecCCcCCHHHHHHHHHcCCCCeEeec
Confidence 999999 6899998873 8988763
No 416
>3v3w_A Starvation sensing protein RSPA; enolase, enzyme function initiative, EFI, lyase; HET: NHE; 1.40A {Cellvibrio japonicus} PDB: 3v4b_A* 4f4r_A 3qkf_A* 3qke_A* 3p93_A* 3ow1_A 3pk7_A* 3rgt_A* 3bsm_A
Probab=65.02 E-value=6.6 Score=36.02 Aligned_cols=88 Identities=11% Similarity=0.241 Sum_probs=55.4
Q ss_pred chhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCCCCCC-CCHHHHHHHHhcCCCCEE
Q psy9039 140 GPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNATGDP-ADVSQLMSVKNAVDLPIL 218 (251)
Q Consensus 140 ~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~g~~-~~~~~l~~vr~~~~~PV~ 218 (251)
+-+...|+.+|. ++.+.-|.+-. + +.....+.++..+.++++.+- ...+ .+.+.++++|+.+++||+
T Consensus 214 e~v~avR~avG~-d~~l~vDaN~~----~--~~~~A~~~~~~L~~~~i~~iE-----qP~~~~d~~~~~~l~~~~~iPIa 281 (424)
T 3v3w_A 214 DVFAAVRKEFGP-DIHLLHDVHHR----L--TPIEAARLGKALEPYHLFWME-----DAVPAENQESFKLIRQHTTTPLA 281 (424)
T ss_dssp HHHHHHHHHHCS-SSEEEEECTTC----C--CHHHHHHHHHHHGGGCCSEEE-----CCSCCSSTTHHHHHHHHCCSCEE
T ss_pred HHHHHHHHHcCC-CCcEEEeCCCC----C--CHHHHHHHHHHHHhcCCCEEE-----CCCChHhHHHHHHHHhhCCCCEE
Confidence 335567888874 66666554311 1 112222333444446777762 1122 246778899999999999
Q ss_pred EecCC-ChHhHHHhhc---CCEEEE
Q psy9039 219 IGSGV-TSDNVEHYMT---ADALII 239 (251)
Q Consensus 219 vG~GI-~~~~v~~~~~---ADGvIV 239 (251)
.+.-+ +++++.++++ +|.+.+
T Consensus 282 ~dE~~~~~~~~~~~i~~ga~d~v~~ 306 (424)
T 3v3w_A 282 VGEVFNSIHDCRELIQNQWIDYIRT 306 (424)
T ss_dssp ECTTCCSGGGTHHHHHTTCCSEECC
T ss_pred EccCcCCHHHHHHHHHcCCCCeEee
Confidence 99999 6888888883 888764
No 417
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=64.85 E-value=6.7 Score=35.21 Aligned_cols=91 Identities=16% Similarity=0.085 Sum_probs=56.9
Q ss_pred CcchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCCCCCC-CCHHHHHHHHhcCCCC
Q psy9039 138 QAGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNATGDP-ADVSQLMSVKNAVDLP 216 (251)
Q Consensus 138 da~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~g~~-~~~~~l~~vr~~~~~P 216 (251)
|.+.+...|+.+|. ++.+.-|.+-. + ++.....+.++..+.++++.+- ...+ .+.+.++++|+.+++|
T Consensus 179 d~~~v~avR~a~g~-~~~l~vDan~~----~-~d~~~A~~~~~~l~~~~i~~iE-----qP~~~~~~~~~~~l~~~~~iP 247 (374)
T 3sjn_A 179 DYAIVKAVREAAGP-EMEVQIDLASK----W-HTCGHSAMMAKRLEEFNLNWIE-----EPVLADSLISYEKLSRQVSQK 247 (374)
T ss_dssp HHHHHHHHHHHHCS-SSEEEEECTTT----T-CSHHHHHHHHHHSGGGCCSEEE-----CSSCTTCHHHHHHHHHHCSSE
T ss_pred HHHHHHHHHHHhCC-CCeEEEECCCC----C-CCHHHHHHHHHHhhhcCceEEE-----CCCCcccHHHHHHHHhhCCCC
Confidence 44555567777774 66666554411 1 1012222333444446777652 1122 3578899999999999
Q ss_pred EEEecCC-ChHhHHHhhc---CCEEEE
Q psy9039 217 ILIGSGV-TSDNVEHYMT---ADALII 239 (251)
Q Consensus 217 V~vG~GI-~~~~v~~~~~---ADGvIV 239 (251)
|+.+.-+ +++++.+++. +|.+.+
T Consensus 248 Ia~dE~~~~~~~~~~~l~~~~~d~v~~ 274 (374)
T 3sjn_A 248 IAGGESLTTRYEFQEFITKSNADIVQP 274 (374)
T ss_dssp EEECTTCCHHHHHHHHHHHHCCSEECC
T ss_pred EEeCCCcCCHHHHHHHHHcCCCCEEEe
Confidence 9999999 5788888883 888764
No 418
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=64.71 E-value=5.3 Score=34.56 Aligned_cols=20 Identities=30% Similarity=0.479 Sum_probs=15.2
Q ss_pred CCCcCCCCccEEEEeecCCCCccc
Q psy9039 43 PPSVPVGVQHGVIVENMHDVPYVL 66 (251)
Q Consensus 43 ~~l~~~Gv~D~i~ieN~~~~Pf~~ 66 (251)
+.+.++|+ |++++ .|.|+..
T Consensus 117 ~~~~~aGv-dgvii---~Dlp~ee 136 (267)
T 3vnd_A 117 TKAQAAGV-DSVLI---ADVPVEE 136 (267)
T ss_dssp HHHHHHTC-CEEEE---TTSCGGG
T ss_pred HHHHHcCC-CEEEe---CCCCHhh
Confidence 44567899 99987 7888753
No 419
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=64.32 E-value=12 Score=32.49 Aligned_cols=60 Identities=13% Similarity=0.294 Sum_probs=39.6
Q ss_pred cHHHHHHHhhhccccEEEecCCCCCCCCCH---HHHHHHHhcCCCCEEE-------ecCCChHhHHHhhc
Q psy9039 174 DITETAKAASFFLSDGLIITGNATGDPADV---SQLMSVKNAVDLPILI-------GSGVTSDNVEHYMT 233 (251)
Q Consensus 174 ~i~~~a~~a~~~~~D~v~VTG~~~g~~~~~---~~l~~vr~~~~~PV~v-------G~GI~~~~v~~~~~ 233 (251)
...+.++.|+..|+|++.+.-.--..++.. +..+++-+++++||++ |.-++++.+.++.+
T Consensus 83 ~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 152 (292)
T 2vc6_A 83 EAIAFVRHAQNAGADGVLIVSPYYNKPTQEGIYQHFKAIDAASTIPIIVYNIPGRSAIEIHVETLARIFE 152 (292)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCccccCcCCCHHHHHHHHh
Confidence 344455666667999998765533223222 4455777778999998 44457898888864
No 420
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=64.06 E-value=15 Score=33.21 Aligned_cols=89 Identities=20% Similarity=0.221 Sum_probs=55.7
Q ss_pred chhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCCCCCCCCHHHHHHHHhcCCCCEEE
Q psy9039 140 GPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNATGDPADVSQLMSVKNAVDLPILI 219 (251)
Q Consensus 140 ~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~g~~~~~~~l~~vr~~~~~PV~v 219 (251)
+.+...|+.+|. ++.+.-|.+-. .+.....+.++..+.++++.+- ..-.+.+.+.++++++.+++||+.
T Consensus 198 e~v~avRea~G~-d~~l~vDan~~------~~~~~a~~~~~~l~~~~i~~iE----eP~~~~d~~~~~~l~~~~~iPIa~ 266 (410)
T 2qq6_A 198 ARVAAVREAVGP-EVEVAIDMHGR------FDIPSSIRFARAMEPFGLLWLE----EPTPPENLDALAEVRRSTSTPICA 266 (410)
T ss_dssp HHHHHHHHHHCS-SSEEEEECTTC------CCHHHHHHHHHHHGGGCCSEEE----CCSCTTCHHHHHHHHTTCSSCEEE
T ss_pred HHHHHHHHhcCC-CCEEEEECCCC------CCHHHHHHHHHHHhhcCCCeEE----CCCChhhHHHHHHHHhhCCCCEEe
Confidence 344456777774 66665454311 1112223334444446777642 111123578899999999999999
Q ss_pred ecCC-ChHhHHHhhc---CCEEEE
Q psy9039 220 GSGV-TSDNVEHYMT---ADALII 239 (251)
Q Consensus 220 G~GI-~~~~v~~~~~---ADGvIV 239 (251)
+..+ +++.+++++. +|.+.+
T Consensus 267 dE~~~~~~~~~~~i~~~~~d~v~i 290 (410)
T 2qq6_A 267 GENVYTRFDFRELFAKRAVDYVMP 290 (410)
T ss_dssp CTTCCSHHHHHHHHHTTCCSEECC
T ss_pred CCCcCCHHHHHHHHHcCCCCEEec
Confidence 9999 6899998883 888765
No 421
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=64.02 E-value=8.5 Score=34.57 Aligned_cols=90 Identities=9% Similarity=0.060 Sum_probs=55.2
Q ss_pred cchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhc-cccEEEecCCCCCCCCCHHHHHHHHhcCCCCE
Q psy9039 139 AGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFF-LSDGLIITGNATGDPADVSQLMSVKNAVDLPI 217 (251)
Q Consensus 139 a~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~-~~D~v~VTG~~~g~~~~~~~l~~vr~~~~~PV 217 (251)
.+.+...|+.+|. ++.+.-|.+- + + +.....+.++..+.+ +++.+- ..-.+.+.+.++++|+.+++||
T Consensus 171 ~e~v~avR~a~G~-d~~l~vDan~--~--~--~~~~a~~~~~~l~~~~~i~~iE----qP~~~~d~~~~~~l~~~~~iPI 239 (382)
T 2gdq_A 171 VRHINALQHTAGS-SITMILDANQ--S--Y--DAAAAFKWERYFSEWTNIGWLE----EPLPFDQPQDYAMLRSRLSVPV 239 (382)
T ss_dssp HHHHHHHHHHHCT-TSEEEEECTT--C--C--CHHHHHTTHHHHTTCSCEEEEE----CCSCSSCHHHHHHHHTTCSSCE
T ss_pred HHHHHHHHHhhCC-CCEEEEECCC--C--C--CHHHHHHHHHHHhhccCCeEEE----CCCCcccHHHHHHHHhhCCCCE
Confidence 4445566777774 5666544431 1 1 111122233333346 677642 1111235788999999999999
Q ss_pred EEecCC-ChHhHHHhhc---CCEEEE
Q psy9039 218 LIGSGV-TSDNVEHYMT---ADALII 239 (251)
Q Consensus 218 ~vG~GI-~~~~v~~~~~---ADGvIV 239 (251)
+.+..+ +++.++++++ +|.+.+
T Consensus 240 a~dE~~~~~~~~~~~i~~~~~d~v~i 265 (382)
T 2gdq_A 240 AGGENMKGPAQYVPLLSQRCLDIIQP 265 (382)
T ss_dssp EECTTCCSHHHHHHHHHTTCCSEECC
T ss_pred EecCCcCCHHHHHHHHHcCCCCEEec
Confidence 999999 6899998883 888765
No 422
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=63.89 E-value=25 Score=29.98 Aligned_cols=68 Identities=16% Similarity=0.143 Sum_probs=38.4
Q ss_pred CcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEee---------CCh-H-HHHHHHHH
Q psy9039 45 SVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQILS---------GCN-K-AALATAQA 113 (251)
Q Consensus 45 l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~---------N~~-~-~~~~ia~a 113 (251)
..++|+ |.|.+--+++ +. ......+-+.++.++.++ .. +|+.+|.|. ++. + .+..+|..
T Consensus 101 Ai~~Ga-~~v~~~~nig---~~---~~~~~~~~~~~v~~~~~~-~~--~~vIi~~~~~G~~~~~~~s~~~i~~a~~~a~~ 170 (263)
T 1w8s_A 101 AVSLGA-SAVGYTIYPG---SG---FEWKMFEELARIKRDAVK-FD--LPLVVESFPRGGKVVNETAPEIVAYAARIALE 170 (263)
T ss_dssp HHHTTC-SEEEEEECTT---ST---THHHHHHHHHHHHHHHHH-HT--CCEEEEECCCSTTCCCTTCHHHHHHHHHHHHH
T ss_pred HHHCCC-CEEEEEEecC---Cc---CHHHHHHHHHHHHHHHHH-cC--CeEEEEeeCCCCccccCCCHHHHHHHHHHHHH
Confidence 357899 9997632233 11 122333333334444443 35 699999887 321 1 22456777
Q ss_pred cCccceecc
Q psy9039 114 AGLDFIRAE 122 (251)
Q Consensus 114 ~g~~Fir~~ 122 (251)
.|++|+...
T Consensus 171 ~GAD~vkt~ 179 (263)
T 1w8s_A 171 LGADAMKIK 179 (263)
T ss_dssp HTCSEEEEE
T ss_pred cCCCEEEEc
Confidence 899999864
No 423
>3ugv_A Enolase; enzyme function initiative, EFI, lyase; 2.30A {Alpha proteobacterium BAL199}
Probab=63.65 E-value=9.2 Score=34.61 Aligned_cols=90 Identities=7% Similarity=0.141 Sum_probs=55.5
Q ss_pred CcchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCCCCCC-CCHHHHHHHHhcCCCC
Q psy9039 138 QAGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNATGDP-ADVSQLMSVKNAVDLP 216 (251)
Q Consensus 138 da~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~g~~-~~~~~l~~vr~~~~~P 216 (251)
|.+.+...|+.+|. ++.+.-|.+-. + +.....+.++..+.++++.+- ...+ .+.+.++++++.+++|
T Consensus 205 d~~~v~avR~a~G~-~~~l~vDaN~~----~--~~~~A~~~~~~l~~~~i~~iE-----qP~~~~d~~~~~~l~~~~~iP 272 (390)
T 3ugv_A 205 DIETAEAVWDAVGR-DTALMVDFNQG----L--DMAEAMHRTRQIDDLGLEWIE-----EPVVYDNFDGYAQLRHDLKTP 272 (390)
T ss_dssp HHHHHHHHHHHHCT-TSEEEEECTTC----C--CHHHHHHHHHHHTTSCCSEEE-----CCSCTTCHHHHHHHHHHCSSC
T ss_pred HHHHHHHHHHHhCC-CCEEEEECCCC----C--CHHHHHHHHHHHHhhCCCEEE-----CCCCcccHHHHHHHHHhcCCC
Confidence 44555567777774 56665444311 1 111222333333445666652 1122 2578889999999999
Q ss_pred EEEecCC-ChHhHHHhhc---CCEEEE
Q psy9039 217 ILIGSGV-TSDNVEHYMT---ADALII 239 (251)
Q Consensus 217 V~vG~GI-~~~~v~~~~~---ADGvIV 239 (251)
|+.+--+ +..++.+++. +|.+.+
T Consensus 273 Ia~dE~~~~~~~~~~~i~~~a~d~v~i 299 (390)
T 3ugv_A 273 LMIGENFYGPREMHQALQAGACDLVMP 299 (390)
T ss_dssp EEECTTCCSHHHHHHHHHTTCCSEECC
T ss_pred EEeCCCcCCHHHHHHHHHcCCCCEEEe
Confidence 9999999 6889988873 887754
No 424
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=63.50 E-value=30 Score=29.75 Aligned_cols=171 Identities=12% Similarity=0.143 Sum_probs=74.6
Q ss_pred CCCcCCCCccEEEEeecCC-CCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeCChHHHHHHH---HHcCccc
Q psy9039 43 PPSVPVGVQHGVIVENMHD-VPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQILSGCNKAALATA---QAAGLDF 118 (251)
Q Consensus 43 ~~l~~~Gv~D~i~ieN~~~-~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~~~~~~ia---~a~g~~F 118 (251)
+-++++|+ |+|.+-=-.| .|.- .-.+..+-+..+++.++. . +|+.+-+-.|....+...+ ...|++.
T Consensus 28 ~~li~~Gv-~gl~~~GttGE~~~L----s~~Er~~v~~~~~~~~~g--r--~pviaGvg~~~t~~ai~la~~a~~~Gada 98 (289)
T 2yxg_A 28 NFLIENGV-SGIVAVGTTGESPTL----SHEEHKKVIEKVVDVVNG--R--VQVIAGAGSNCTEEAIELSVFAEDVGADA 98 (289)
T ss_dssp HHHHHTTC-SEEEESSTTTTGGGS----CHHHHHHHHHHHHHHHTT--S--SEEEEECCCSSHHHHHHHHHHHHHHTCSE
T ss_pred HHHHHCCC-CEEEECccccChhhC----CHHHHHHHHHHHHHHhCC--C--CcEEEeCCCCCHHHHHHHHHHHHhcCCCE
Confidence 55678999 9998621111 2211 122333333333333332 2 6888887777644443333 3345544
Q ss_pred eecccccccccCCCceeecCcchhHHHHHhcCC-Ccchh-hhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCC
Q psy9039 119 IRAESFVFGHMADEGLMNAQAGPLLRYRKQIGA-DNVLV-FTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNA 196 (251)
Q Consensus 119 ir~~~~~~~~~~~~Gli~~da~e~~~~r~~l~~-~~i~i-~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~ 196 (251)
+-.- ..-...+..+++.++.+.+-. -++.+ ++++-...|..+ +.+.+.++++ +.-.+ .|-+
T Consensus 99 vlv~--------~P~y~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l--~~~~~~~La~--~~pni-----vgiK 161 (289)
T 2yxg_A 99 VLSI--------TPYYNKPTQEGLRKHFGKVAESINLPIVLYNVPSRTAVNL--EPKTVKLLAE--EYSNI-----SAVK 161 (289)
T ss_dssp EEEE--------CCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCC--CHHHHHHHHH--HCTTE-----EEEE
T ss_pred EEEC--------CCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCcCC--CHHHHHHHHH--hCCCE-----EEEE
Confidence 3321 111112344555555444311 12222 333333334432 2333434331 22111 1211
Q ss_pred CCCCCCHHHHHHHHhcCCCCEEEecCCChHhHHHhhc-CCEEEEece
Q psy9039 197 TGDPADVSQLMSVKNAVDLPILIGSGVTSDNVEHYMT-ADALIIGSH 242 (251)
Q Consensus 197 ~g~~~~~~~l~~vr~~~~~PV~vG~GI~~~~v~~~~~-ADGvIVGS~ 242 (251)
. ...+...+.++++..+.-|+.|. ..--+..+.. ++|+|-|++
T Consensus 162 ~-s~gd~~~~~~~~~~~~f~v~~G~--d~~~~~~l~~G~~G~is~~~ 205 (289)
T 2yxg_A 162 E-ANPNLSQVSELIHDAKITVLSGN--DELTLPIIALGGKGVISVVA 205 (289)
T ss_dssp E-CCSCTHHHHHHHHHTCSEEEESC--GGGHHHHHHTTCCEEEESGG
T ss_pred e-CCCCHHHHHHHHHhCCeEEEECc--HHHHHHHHHCCCCEEEeChh
Confidence 1 11235555555544455555543 2222333444 999998875
No 425
>4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii}
Probab=63.35 E-value=5.2 Score=36.40 Aligned_cols=89 Identities=11% Similarity=0.110 Sum_probs=55.5
Q ss_pred cchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCCCCCC-CCHHHHHHHHhcCCCCE
Q psy9039 139 AGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNATGDP-ADVSQLMSVKNAVDLPI 217 (251)
Q Consensus 139 a~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~g~~-~~~~~l~~vr~~~~~PV 217 (251)
.+.+...|+.+|. ++.+.-|.+- .+ +.....+.++..+.++++.+- ...+ .+.+.++++|+.+++||
T Consensus 195 ~~~v~avR~a~G~-d~~l~vDan~----~~--~~~~A~~~~~~l~~~~i~~iE-----eP~~~~~~~~~~~l~~~~~iPI 262 (404)
T 4e5t_A 195 EAFCKQIRAAVGT-KADLLFGTHG----QF--TVSGAKRLARRLEAYDPLWFE-----EPIPPEKPEDMAEVARYTSIPV 262 (404)
T ss_dssp HHHHHHHHHHHGG-GSEEEECCCS----CB--CHHHHHHHHHHHGGGCCSEEE-----CCSCTTCHHHHHHHHHHCSSCE
T ss_pred HHHHHHHHHHcCC-CCeEEEeCCC----Cc--CHHHHHHHHHHHhhcCCcEEE-----CCCCcccHHHHHHHHhhCCCCE
Confidence 4455667777774 6666544331 11 111222233433446777762 1122 25788999999999999
Q ss_pred EEecCC-ChHhHHHhhc---CCEEEE
Q psy9039 218 LIGSGV-TSDNVEHYMT---ADALII 239 (251)
Q Consensus 218 ~vG~GI-~~~~v~~~~~---ADGvIV 239 (251)
+.+.-+ +++++.++++ +|.+.+
T Consensus 263 a~dE~~~~~~~~~~~i~~~a~d~v~~ 288 (404)
T 4e5t_A 263 ATGERLCTKYEFSRVLETGAASILQM 288 (404)
T ss_dssp EECTTCCHHHHHHHHHHHTCCSEECC
T ss_pred EeCCCcCCHHHHHHHHHhCCCCEEec
Confidence 999999 5788888874 888764
No 426
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=63.23 E-value=6 Score=33.60 Aligned_cols=63 Identities=22% Similarity=0.306 Sum_probs=41.4
Q ss_pred HHHHHHhhhccccEEEecCCCCCCCCC--HHHHHHHHhcCCCCEEEecCCChHhHHHhhc-CCEEEEeceEe
Q psy9039 176 TETAKAASFFLSDGLIITGNATGDPAD--VSQLMSVKNAVDLPILIGSGVTSDNVEHYMT-ADALIIGSHFK 244 (251)
Q Consensus 176 ~~~a~~a~~~~~D~v~VTG~~~g~~~~--~~~l~~vr~~~~~PV~vG~GI~~~~v~~~~~-ADGvIVGS~~~ 244 (251)
.++++.....|+|++.+-|+ .|...+ .+.++++|+ .++|+++=.+-+ +.+ .. +||+++=+-..
T Consensus 23 ~~~~~~l~~~GaD~IelG~S-~g~t~~~~~~~v~~ir~-~~~Pivl~~y~~-n~i---~~gvDg~iipdLp~ 88 (234)
T 2f6u_A 23 DEIIKAVADSGTDAVMISGT-QNVTYEKARTLIEKVSQ-YGLPIVVEPSDP-SNV---VYDVDYLFVPTVLN 88 (234)
T ss_dssp HHHHHHHHTTTCSEEEECCC-TTCCHHHHHHHHHHHTT-SCCCEEECCSSC-CCC---CCCSSEEEEEEETT
T ss_pred HHHHHHHHHcCCCEEEECCC-CCCCHHHHHHHHHHhcC-CCCCEEEecCCc-chh---hcCCCEEEEcccCC
Confidence 33445555679999988774 344332 377889998 899999844442 222 33 99999865443
No 427
>2xed_A Putative maleate isomerase; nicotinic acid catabolism, cofactor-independent CIS-trans isomerase; 1.95A {Nocardia farcinica} PDB: 2xec_A
Probab=63.16 E-value=8.7 Score=33.00 Aligned_cols=45 Identities=16% Similarity=0.349 Sum_probs=27.2
Q ss_pred ccHHHHHHHhhhccccEEEec-CCCCCCCCCHHHHHHHHhcCCCCEEEe
Q psy9039 173 VDITETAKAASFFLSDGLIIT-GNATGDPADVSQLMSVKNAVDLPILIG 220 (251)
Q Consensus 173 ~~i~~~a~~a~~~~~D~v~VT-G~~~g~~~~~~~l~~vr~~~~~PV~vG 220 (251)
..+.++++.....++|+++.. .+.- +. ...+.++.+.+++||+-.
T Consensus 194 ~~l~~~~~~l~~~gadaIvLg~CT~l--~~-~~~~~~le~~lg~PVids 239 (273)
T 2xed_A 194 EQVMAAARSLDLSEVDALVISCAVQM--PS-LPLVETAEREFGIPVLSA 239 (273)
T ss_dssp HHHHHHHHHSCCTTCSEEEEESSSSS--CC-TTHHHHHHHHHSSCEEEH
T ss_pred HHHHHHHHHHhhCCCCEEEEcCCCCc--ch-HHhHHHHHHHhCCCEEcH
Confidence 345555555544689999887 6643 22 234555555668998643
No 428
>3r4e_A Mandelate racemase/muconate lactonizing enzyme; enolase fold, mannonate dehydratase, D-mannonate, lyase; HET: CS2; 1.65A {Novosphingobium aromaticivorans} PDB: 2qjj_A 2qjn_A* 2qjm_A*
Probab=62.49 E-value=6.3 Score=36.07 Aligned_cols=88 Identities=14% Similarity=0.110 Sum_probs=55.4
Q ss_pred chhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCCCCCC-CCHHHHHHHHhcCCCCEE
Q psy9039 140 GPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNATGDP-ADVSQLMSVKNAVDLPIL 218 (251)
Q Consensus 140 ~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~g~~-~~~~~l~~vr~~~~~PV~ 218 (251)
+-+...|+.+|. ++.+..|.+-. + +.....+.++..+.++++.+- ...+ .+.+.++++|+.+++||+
T Consensus 208 ~~v~avR~a~G~-d~~l~vDaN~~----~--~~~~A~~~~~~L~~~~i~~iE-----qP~~~~d~~~~~~l~~~~~iPIa 275 (418)
T 3r4e_A 208 KLFEELRKTYGF-DHHLLHDGHHR----Y--TPQEAANLGKMLEPYQLFWLE-----DCTPAENQEAFRLVRQHTVTPLA 275 (418)
T ss_dssp HHHHHHHHHHCS-SSEEEEECTTC----S--CHHHHHHHHHHHGGGCCSEEE-----SCSCCSSGGGGHHHHHHCCSCEE
T ss_pred HHHHHHHHHcCC-CCeEEEeCCCC----C--CHHHHHHHHHHHHhhCCCEEE-----CCCCccCHHHHHHHHhcCCCCEE
Confidence 345567788874 66666554311 1 112222333444446777762 1122 246778899999999999
Q ss_pred EecCC-ChHhHHHhhc---CCEEEE
Q psy9039 219 IGSGV-TSDNVEHYMT---ADALII 239 (251)
Q Consensus 219 vG~GI-~~~~v~~~~~---ADGvIV 239 (251)
.+.-+ +++++.++++ +|.+.+
T Consensus 276 ~dE~~~~~~~~~~~l~~~a~d~v~~ 300 (418)
T 3r4e_A 276 VGEIFNTIWDAKDLIQNQLIDYIRA 300 (418)
T ss_dssp ECTTCCSGGGTHHHHHTTCCSEECC
T ss_pred EcCCcCCHHHHHHHHHcCCCCeEec
Confidence 99999 6888888883 888765
No 429
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=62.31 E-value=18 Score=32.54 Aligned_cols=90 Identities=12% Similarity=0.110 Sum_probs=56.4
Q ss_pred CcchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCCCCCC-CCHHHHHHHHhcCCCC
Q psy9039 138 QAGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNATGDP-ADVSQLMSVKNAVDLP 216 (251)
Q Consensus 138 da~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~g~~-~~~~~l~~vr~~~~~P 216 (251)
|.+.+...|+.+ +++.+.-|.+-. + +.....+.++..+.++++.+- ...+ .+.+.++++++.+++|
T Consensus 179 d~~~v~avR~a~--~~~~l~vDan~~----~--~~~~A~~~~~~L~~~~i~~iE-----qP~~~~d~~~~~~l~~~~~iP 245 (385)
T 3i6e_A 179 DIMRLELIARDF--PEFRVRVDYNQG----L--EIDEAVPRVLDVAQFQPDFIE-----QPVRAHHFELMARLRGLTDVP 245 (385)
T ss_dssp HHHHHHHHHHHC--TTSEEEEECTTC----C--CGGGHHHHHHHHHTTCCSCEE-----CCSCTTCHHHHHHHHTTCSSC
T ss_pred HHHHHHHHHHhC--CCCeEEEECCCC----C--CHHHHHHHHHHHHhcCCCEEE-----CCCCcccHHHHHHHHHhCCCC
Confidence 344455566666 466665554322 1 222333444554445666641 1222 3578899999999999
Q ss_pred EEEecCC-ChHhHHHhhc---CCEEEEe
Q psy9039 217 ILIGSGV-TSDNVEHYMT---ADALIIG 240 (251)
Q Consensus 217 V~vG~GI-~~~~v~~~~~---ADGvIVG 240 (251)
|+.+--+ +..++.+++. +|.+.+-
T Consensus 246 Ia~dE~~~~~~~~~~~~~~~~~d~v~~k 273 (385)
T 3i6e_A 246 LLADESVYGPEDMVRAAHEGICDGVSIK 273 (385)
T ss_dssp EEESTTCCSHHHHHHHHHHTCCSEEEEC
T ss_pred EEEeCCcCCHHHHHHHHHcCCCCEEEec
Confidence 9999988 6888888873 8888763
No 430
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=62.31 E-value=3.8 Score=36.51 Aligned_cols=47 Identities=11% Similarity=-0.095 Sum_probs=34.4
Q ss_pred HHHHHHhhCCCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEe
Q psy9039 34 LCAEIRKVLPPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQIL 100 (251)
Q Consensus 34 i~~~a~~~a~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~ 100 (251)
-++.+++++++++++|+ |+|.+| ++| ....++++.+.++ +|+-+|+.
T Consensus 187 gl~~ai~Ra~Ay~eAGA-d~i~~e---~~~--------------~~e~~~~i~~~l~--~P~lan~~ 233 (318)
T 1zlp_A 187 GLEEGIRRANLYKEAGA-DATFVE---APA--------------NVDELKEVSAKTK--GLRIANMI 233 (318)
T ss_dssp HHHHHHHHHHHHHHTTC-SEEEEC---CCC--------------SHHHHHHHHHHSC--SEEEEEEC
T ss_pred CHHHHHHHHHHHHHcCC-CEEEEc---CCC--------------CHHHHHHHHHhcC--CCEEEEec
Confidence 35788999999999999 999874 221 1234566777777 79887765
No 431
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=62.30 E-value=10 Score=33.90 Aligned_cols=90 Identities=16% Similarity=0.089 Sum_probs=55.1
Q ss_pred CcchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCCCCCC-CCHHHHHHHHhcCCCC
Q psy9039 138 QAGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNATGDP-ADVSQLMSVKNAVDLP 216 (251)
Q Consensus 138 da~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~g~~-~~~~~l~~vr~~~~~P 216 (251)
|.+.+...|+.+|. ++.+.-|.+-. + +.....+.++..+.++++.+- ...+ .+.+.++++++.+++|
T Consensus 183 d~~~v~avR~~~g~-~~~l~vDan~~----~--~~~~a~~~~~~l~~~~i~~iE-----qP~~~~d~~~~~~l~~~~~iP 250 (372)
T 3tj4_A 183 DIARLTAVRERVDS-AVRIAIDGNGK----W--DLPTCQRFCAAAKDLDIYWFE-----EPLWYDDVTSHARLARNTSIP 250 (372)
T ss_dssp HHHHHHHHHHHSCT-TCEEEEECTTC----C--CHHHHHHHHHHTTTSCEEEEE-----SCSCTTCHHHHHHHHHHCSSC
T ss_pred HHHHHHHHHHHcCC-CCcEEeeCCCC----C--CHHHHHHHHHHHhhcCCCEEE-----CCCCchhHHHHHHHHhhcCCC
Confidence 34555667777774 56665444311 1 111222333333345666542 1122 3578889999999999
Q ss_pred EEEecCC-ChHhHHHhhc---CCEEEE
Q psy9039 217 ILIGSGV-TSDNVEHYMT---ADALII 239 (251)
Q Consensus 217 V~vG~GI-~~~~v~~~~~---ADGvIV 239 (251)
|+.+--+ +++++.+++. +|.+.+
T Consensus 251 Ia~dE~~~~~~~~~~~i~~~~~d~v~~ 277 (372)
T 3tj4_A 251 IALGEQLYTVDAFRSFIDAGAVAYVQP 277 (372)
T ss_dssp EEECTTCCSHHHHHHHHHTTCCSEECC
T ss_pred EEeCCCccCHHHHHHHHHcCCCCEEEe
Confidence 9999999 6899988873 887754
No 432
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified}
Probab=62.15 E-value=9 Score=34.97 Aligned_cols=90 Identities=14% Similarity=0.129 Sum_probs=56.3
Q ss_pred CcchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCCCCCC-CCHHHHHHHHhcCCCC
Q psy9039 138 QAGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNATGDP-ADVSQLMSVKNAVDLP 216 (251)
Q Consensus 138 da~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~g~~-~~~~~l~~vr~~~~~P 216 (251)
|.+.+...|+.+|. ++.+.-|.+-. + +.....+.++..+.++++.+- ...+ .+.+.++++|+.+++|
T Consensus 187 d~~~v~avR~a~G~-d~~l~vDaN~~----~--~~~~A~~~~~~L~~~~i~~iE-----eP~~~~d~~~~~~l~~~~~iP 254 (412)
T 4e4u_A 187 CELFCRRVREAVGS-KADLLFGTHGQ----M--VPSSAIRLAKRLEKYDPLWFE-----EPVPPGQEEAIAQVAKHTSIP 254 (412)
T ss_dssp HHHHHHHHHHHHTT-SSEEEECCCSC----B--CHHHHHHHHHHHGGGCCSEEE-----CCSCSSCHHHHHHHHHTCSSC
T ss_pred HHHHHHHHHHHhCC-CCeEEEECCCC----C--CHHHHHHHHHHhhhcCCcEEE-----CCCChhhHHHHHHHHhhCCCC
Confidence 34455667788874 66665444311 1 111222233333446777652 1122 3578899999999999
Q ss_pred EEEecCC-ChHhHHHhhc---CCEEEE
Q psy9039 217 ILIGSGV-TSDNVEHYMT---ADALII 239 (251)
Q Consensus 217 V~vG~GI-~~~~v~~~~~---ADGvIV 239 (251)
|+.+--+ +++++.+++. +|.+.+
T Consensus 255 Ia~dE~~~~~~~~~~~i~~~a~d~v~~ 281 (412)
T 4e4u_A 255 IATGERLTTKYEFHKLLQAGGASILQL 281 (412)
T ss_dssp EEECTTCCHHHHHHHHHHTTCCSEECC
T ss_pred EEecCccCCHHHHHHHHHcCCCCEEEe
Confidence 9999999 5788888873 888764
No 433
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=62.02 E-value=33 Score=29.52 Aligned_cols=64 Identities=22% Similarity=0.257 Sum_probs=45.7
Q ss_pred HHHHHHHhhhccccEEEe-cCCCCCCCCCHHHHHHHHhcCCCCEEEecCC-ChHhHHHhhc--CCEEEEe
Q psy9039 175 ITETAKAASFFLSDGLII-TGNATGDPADVSQLMSVKNAVDLPILIGSGV-TSDNVEHYMT--ADALIIG 240 (251)
Q Consensus 175 i~~~a~~a~~~~~D~v~V-TG~~~g~~~~~~~l~~vr~~~~~PV~vG~GI-~~~~v~~~~~--ADGvIVG 240 (251)
..++|+..+ .|++++-| |-.+ -...+.+.+.++|+.+++||+-===| ++-|+.+... ||++..=
T Consensus 66 p~~iA~~~~-~GA~aiSVLTd~~-~F~Gs~~~L~~vr~~v~lPvLrKDFiid~yQI~eAr~~GADaILLI 133 (258)
T 4a29_A 66 PIEYAKFME-RYAVGLSITTEEK-YFNGSYETLRKIASSVSIPILMSDFIVKESQIDDAYNLGADTVLLI 133 (258)
T ss_dssp HHHHHHHHT-TTCSEEEEECCST-TTCCCHHHHHHHHTTCSSCEEEESCCCSHHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHh-CCCeEEEEeCCCC-CCCCCHHHHHHHHHhcCCCEeeccccccHHHHHHHHHcCCCeeehH
Confidence 345554332 58888854 5443 35567899999999999999885545 8999888775 9998543
No 434
>3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica}
Probab=62.01 E-value=8.2 Score=34.95 Aligned_cols=90 Identities=13% Similarity=0.096 Sum_probs=53.4
Q ss_pred cchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCCCCCCCC-HHHHHHHHhcCCCCE
Q psy9039 139 AGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNATGDPAD-VSQLMSVKNAVDLPI 217 (251)
Q Consensus 139 a~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~g~~~~-~~~l~~vr~~~~~PV 217 (251)
.+.+...|+.+|. ++.+.-|.+-. .+.....+.++..+.++++.+- ..-.+.+ .+.++++|+.+++||
T Consensus 186 ~~~v~avR~a~g~-~~~l~vDaN~~------~~~~~A~~~~~~L~~~~i~~iE----eP~~~~d~~~~~~~l~~~~~iPI 254 (392)
T 3ddm_A 186 VRNALHVRELLGA-ATPLMADANQG------WDLPRARQMAQRLGPAQLDWLE----EPLRADRPAAEWAELAQAAPMPL 254 (392)
T ss_dssp HHHHHHHHHHHCS-SSCEEEECTTC------CCHHHHHHHHHHHGGGCCSEEE----CCSCTTSCHHHHHHHHHHCSSCE
T ss_pred HHHHHHHHHhcCC-CceEEEeCCCC------CCHHHHHHHHHHHHHhCCCEEE----CCCCccchHHHHHHHHHhcCCCE
Confidence 4445556666663 55555443311 1112222333433446676652 1111235 788899999999999
Q ss_pred EEecCC-ChHhHHHhhc---CCEEEE
Q psy9039 218 LIGSGV-TSDNVEHYMT---ADALII 239 (251)
Q Consensus 218 ~vG~GI-~~~~v~~~~~---ADGvIV 239 (251)
+.+--+ +++++.+++. +|.+.+
T Consensus 255 a~dE~~~~~~~~~~~i~~~a~d~v~~ 280 (392)
T 3ddm_A 255 AGGENIAGVAAFETALAARSLRVMQP 280 (392)
T ss_dssp EECTTCCSHHHHHHHHHHTCEEEECC
T ss_pred EeCCCCCCHHHHHHHHHcCCCCEEEe
Confidence 999999 6899988874 776654
No 435
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=61.93 E-value=7.9 Score=32.93 Aligned_cols=58 Identities=14% Similarity=0.328 Sum_probs=41.5
Q ss_pred hhhccccEEEecCCCCCCCC-C-HHHHHHHHhcCCCCEEEecCCChHhHHHhhc-CCEEEEeceEee
Q psy9039 182 ASFFLSDGLIITGNATGDPA-D-VSQLMSVKNAVDLPILIGSGVTSDNVEHYMT-ADALIIGSHFKQ 245 (251)
Q Consensus 182 a~~~~~D~v~VTG~~~g~~~-~-~~~l~~vr~~~~~PV~vG~GI~~~~v~~~~~-ADGvIVGS~~~~ 245 (251)
....|+|++.|-|+. |... + .+.++++|+ .++|+++=-| +++++ .. +|++++=|-+-.
T Consensus 32 ~~~~GtDaI~vGgs~-gvt~~~~~~~v~~ik~-~~~Piil~p~-~~~~~---~~gaD~il~pslln~ 92 (235)
T 3w01_A 32 ICMSQTDAIMIGGTD-DVTEDNVIHLMSKIRR-YPLPLVLEIS-NIESV---MPGFDFYFVPTVLNS 92 (235)
T ss_dssp HHTSSCSEEEECCSS-CCCHHHHHHHHHHHTT-SCSCEEEECC-CSTTC---CTTCSEEEEEEETTB
T ss_pred HHHcCCCEEEECCcC-CcCHHHHHHHHHHhcC-cCCCEEEecC-CHHHh---hcCCCEEEEccccCC
Confidence 345799999998864 4433 2 377889999 8999988444 56444 45 999999776644
No 436
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=61.78 E-value=28 Score=28.48 Aligned_cols=69 Identities=19% Similarity=0.210 Sum_probs=46.3
Q ss_pred ccHHHHHHHhhhccccEEEec---CCC-CCCCCCHHHHHHHHhcCCCCEEEecCCC-hH-hHHHhhc--CCEEEEec
Q psy9039 173 VDITETAKAASFFLSDGLIIT---GNA-TGDPADVSQLMSVKNAVDLPILIGSGVT-SD-NVEHYMT--ADALIIGS 241 (251)
Q Consensus 173 ~~i~~~a~~a~~~~~D~v~VT---G~~-~g~~~~~~~l~~vr~~~~~PV~vG~GI~-~~-~v~~~~~--ADGvIVGS 241 (251)
.++.+.++.+...|+|.+-+. |.- .......+.++++|+.++.|+.+..=++ ++ .+..+.. ||++++.-
T Consensus 23 ~~~~~~i~~~~~~G~d~i~l~~~dg~f~~~~~~~~~~i~~l~~~~~~~~~v~l~vnd~~~~v~~~~~~Gad~v~vh~ 99 (230)
T 1rpx_A 23 SKLGEQVKAIEQAGCDWIHVDVMDGRFVPNITIGPLVVDSLRPITDLPLDVHLMIVEPDQRVPDFIKAGADIVSVHC 99 (230)
T ss_dssp GGHHHHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHGGGCCSCEEEEEESSSHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHHHHCCCCEEEEeeccCCcccccccCHHHHHHHHhccCCcEEEEEEecCHHHHHHHHHHcCCCEEEEEe
Confidence 355566666666688887663 210 0112236888999998888999999885 43 5666664 99998764
No 437
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=61.22 E-value=12 Score=30.11 Aligned_cols=66 Identities=15% Similarity=0.065 Sum_probs=42.1
Q ss_pred cHHHHHHHhhhccccEEEecCCCCCCCCCHHHHHHHHhcC--CCCEEEecCCChHhHHHhhc--CCEEEEeceE
Q psy9039 174 DITETAKAASFFLSDGLIITGNATGDPADVSQLMSVKNAV--DLPILIGSGVTSDNVEHYMT--ADALIIGSHF 243 (251)
Q Consensus 174 ~i~~~a~~a~~~~~D~v~VTG~~~g~~~~~~~l~~vr~~~--~~PV~vG~GI~~~~v~~~~~--ADGvIVGS~~ 243 (251)
...++++.+..+|++.+-++-.. +...+.++++|+.+ +.++-+|.=.+++++.+... ||.+ |+..|
T Consensus 23 ~~~~~~~~~~~~G~~~iev~~~~---~~~~~~i~~ir~~~~~~~~ig~~~v~~~~~~~~a~~~Gad~i-v~~~~ 92 (205)
T 1wa3_A 23 EAKEKALAVFEGGVHLIEITFTV---PDADTVIKELSFLKEKGAIIGAGTVTSVEQCRKAVESGAEFI-VSPHL 92 (205)
T ss_dssp HHHHHHHHHHHTTCCEEEEETTS---TTHHHHHHHTHHHHHTTCEEEEESCCSHHHHHHHHHHTCSEE-ECSSC
T ss_pred HHHHHHHHHHHCCCCEEEEeCCC---hhHHHHHHHHHHHCCCCcEEEecccCCHHHHHHHHHcCCCEE-EcCCC
Confidence 34445555555789999776432 12245688888875 35544444337888888775 9999 77654
No 438
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=61.21 E-value=32 Score=29.82 Aligned_cols=150 Identities=9% Similarity=-0.021 Sum_probs=0.0
Q ss_pred HHHHHHHHHhhCCCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeCChHHHHHH
Q psy9039 31 MTRLCAEIRKVLPPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQILSGCNKAALAT 110 (251)
Q Consensus 31 ~~~i~~~a~~~a~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~~~~~~i 110 (251)
++.+ +.|.+.|+ |.|++ |+|.+.|. -...++++++..+.. .+...+-.+......++
T Consensus 30 ~~i~--------~~L~~~Gv-~~IE~----g~p~~~~~---------d~e~v~~i~~~~~~~-~i~~l~~~~~~di~~a~ 86 (293)
T 3ewb_X 30 IQIA--------LQLEKLGI-DVIEA----GFPISSPG---------DFECVKAIAKAIKHC-SVTGLARCVEGDIDRAE 86 (293)
T ss_dssp HHHH--------HHHHHHTC-SEEEE----ECGGGCHH---------HHHHHHHHHHHCCSS-EEEEEEESSHHHHHHHH
T ss_pred HHHH--------HHHHHcCC-CEEEE----eCCCCCcc---------HHHHHHHHHHhcCCC-EEEEEecCCHHHHHHHH
Q ss_pred HHHcCccceecccccccccCCCceeecCcc-----------------hhHHHHHhcCCCcchhhhhhHhhccCCCCCCcc
Q psy9039 111 AQAAGLDFIRAESFVFGHMADEGLMNAQAG-----------------PLLRYRKQIGADNVLVFTDIKKKHSSHAITADV 173 (251)
Q Consensus 111 a~a~g~~Fir~~~~~~~~~~~~Gli~~da~-----------------e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~ 173 (251)
+...++..-++..|.. ..|.. +..++.++.+. .+.+-..-..+ ++..
T Consensus 87 ~~~~~ag~~~v~i~~~---------~Sd~~~~~nl~~s~~e~l~~~~~~v~~a~~~g~-~v~~~~~d~~~------~~~~ 150 (293)
T 3ewb_X 87 EALKDAVSPQIHIFLA---------TSDVHMEYKLKMSRAEVLASIKHHISYARQKFD-VVQFSPEDATR------SDRA 150 (293)
T ss_dssp HHHTTCSSEEEEEEEE---------CSHHHHHHTTCCCHHHHHHHHHHHHHHHHTTCS-CEEEEEETGGG------SCHH
T ss_pred HHHhhcCCCEEEEEec---------CcHHHHHHHhCCCHHHHHHHHHHHHHHHHhCCC-EEEEEeccCCC------CCHH
Q ss_pred cHHHHHHHhhhccccEEEecCCCCCCCCCH--HHHHHHHhcCC----CCEEE
Q psy9039 174 DITETAKAASFFLSDGLIITGNATGDPADV--SQLMSVKNAVD----LPILI 219 (251)
Q Consensus 174 ~i~~~a~~a~~~~~D~v~VTG~~~g~~~~~--~~l~~vr~~~~----~PV~v 219 (251)
.+.++++.+...|+|.+.+--+--...|.. ++++.+|+..+ +|+-+
T Consensus 151 ~~~~~~~~~~~~G~~~i~l~DT~G~~~P~~v~~lv~~l~~~~~~~~~~~l~~ 202 (293)
T 3ewb_X 151 FLIEAVQTAIDAGATVINIPDTVGYTNPTEFGQLFQDLRREIKQFDDIIFAS 202 (293)
T ss_dssp HHHHHHHHHHHTTCCEEEEECSSSCCCHHHHHHHHHHHHHHCTTGGGSEEEE
T ss_pred HHHHHHHHHHHcCCCEEEecCCCCCCCHHHHHHHHHHHHHhcCCccCceEEE
No 439
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=60.92 E-value=20 Score=31.44 Aligned_cols=63 Identities=22% Similarity=0.370 Sum_probs=42.2
Q ss_pred HHHhhhccccEEEecCC--CCCCCCCHHHHHHHHhcCCCCEEE-----ecCC--ChH-------hHHHhhc--CCEEEEe
Q psy9039 179 AKAASFFLSDGLIITGN--ATGDPADVSQLMSVKNAVDLPILI-----GSGV--TSD-------NVEHYMT--ADALIIG 240 (251)
Q Consensus 179 a~~a~~~~~D~v~VTG~--~~g~~~~~~~l~~vr~~~~~PV~v-----G~GI--~~~-------~v~~~~~--ADGvIVG 240 (251)
+..|...|+|.+=.-.. .-|..++...++.+|+.+++||.+ |++- |.+ .+..+.+ |||+++|
T Consensus 52 a~~A~~gGAdRIELc~~l~~GGlTPS~g~i~~a~~~~~ipV~vMIRPRgGdF~Ys~~E~~~M~~dI~~~~~~GAdGvVfG 131 (287)
T 3iwp_A 52 AVNAERGGADRIELCSGLSEGGTTPSMGVLQVVKQSVQIPVFVMIRPRGGDFLYSDREIEVMKADIRLAKLYGADGLVFG 131 (287)
T ss_dssp HHHHHHHTCSEEEECBCGGGTCBCCCHHHHHHHHTTCCSCEEEECCSSSSCSCCCHHHHHHHHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHhCCCEEEECCCCCCCCCCCCHHHHHHHHHhcCCCeEEEEecCCCCcccCHHHHHHHHHHHHHHHHcCCCEEEEe
Confidence 45555568888744332 224456788999999998999887 4433 543 3444554 9999999
Q ss_pred c
Q psy9039 241 S 241 (251)
Q Consensus 241 S 241 (251)
-
T Consensus 132 ~ 132 (287)
T 3iwp_A 132 A 132 (287)
T ss_dssp C
T ss_pred e
Confidence 3
No 440
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=60.85 E-value=9.2 Score=34.50 Aligned_cols=90 Identities=12% Similarity=0.201 Sum_probs=56.3
Q ss_pred CcchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCCCCCC-CCHHHHHHHHhcCCCC
Q psy9039 138 QAGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNATGDP-ADVSQLMSVKNAVDLP 216 (251)
Q Consensus 138 da~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~g~~-~~~~~l~~vr~~~~~P 216 (251)
|.+.+...|+.+|. ++.+.-|.+-. + +.....+.++..+.++++.+- ...+ .+.+.++++++.+++|
T Consensus 199 d~~~v~avR~a~G~-~~~l~vDaN~~----~--~~~~A~~~~~~l~~~~i~~iE-----eP~~~~d~~~~~~l~~~~~iP 266 (383)
T 3toy_A 199 DEAMIKGLRALLGP-DIALMLDFNQS----L--DPAEATRRIARLADYDLTWIE-----EPVPQENLSGHAAVRERSEIP 266 (383)
T ss_dssp HHHHHHHHHHHHCT-TSEEEEECTTC----S--CHHHHHHHHHHHGGGCCSEEE-----CCSCTTCHHHHHHHHHHCSSC
T ss_pred HHHHHHHHHHHhCC-CCeEEEeCCCC----C--CHHHHHHHHHHHHhhCCCEEE-----CCCCcchHHHHHHHHhhcCCC
Confidence 45556667788874 66665454311 1 112222333444446666652 1222 2578889999999999
Q ss_pred EEEecCC-ChHhHHHhhc---CCEEEE
Q psy9039 217 ILIGSGV-TSDNVEHYMT---ADALII 239 (251)
Q Consensus 217 V~vG~GI-~~~~v~~~~~---ADGvIV 239 (251)
|+.+--+ +..++.+++. +|.+.+
T Consensus 267 Ia~dE~~~~~~~~~~~i~~~a~d~v~i 293 (383)
T 3toy_A 267 IQAGENWWFPRGFAEAIAAGASDFIMP 293 (383)
T ss_dssp EEECTTCCHHHHHHHHHHHTCCSEECC
T ss_pred EEeCCCcCCHHHHHHHHHcCCCCEEEe
Confidence 9999999 5788888873 888764
No 441
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=60.82 E-value=11 Score=32.12 Aligned_cols=64 Identities=19% Similarity=0.276 Sum_probs=41.0
Q ss_pred HHHHHHhhhccccEEEecCCCCCCCCC--HHHHHHHHhcCCCCEEEecCCChHhHHHhhc-CCEEEEeceEee
Q psy9039 176 TETAKAASFFLSDGLIITGNATGDPAD--VSQLMSVKNAVDLPILIGSGVTSDNVEHYMT-ADALIIGSHFKQ 245 (251)
Q Consensus 176 ~~~a~~a~~~~~D~v~VTG~~~g~~~~--~~~l~~vr~~~~~PV~vG~GI~~~~v~~~~~-ADGvIVGS~~~~ 245 (251)
.++++.....|+|++.+-|+ .|...+ .+.++++|+ +++|+++=.+.+ +.+ .. +||+|+=+-...
T Consensus 23 ~~~~~~l~~~GaD~ielG~S-~Gvt~~~~~~~v~~ir~-~~~Pivlm~y~~-n~i---~~G~dg~iiPdLp~e 89 (240)
T 1viz_A 23 DEQLEILCESGTDAVIIGGS-DGVTEDNVLRMMSKVRR-FLVPCVLEVSAI-EAI---VPGFDLYFIPSVLNS 89 (240)
T ss_dssp HHHHHHHHTSCCSEEEECC-----CHHHHHHHHHHHTT-SSSCEEEECSCG-GGC---CSCCSEEEEEEETTB
T ss_pred HHHHHHHHHcCCCEEEECCC-CCCCHHHHHHHHHHhhC-cCCCEEEecCcc-ccc---cCCCCEEEEcccCcc
Confidence 33445555679999988774 344432 477889998 899999855553 111 34 999998665433
No 442
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=60.34 E-value=78 Score=27.71 Aligned_cols=165 Identities=16% Similarity=0.190 Sum_probs=76.5
Q ss_pred CCCcchHHHHHHHHHhhCCCCcCCCCccEEEEeecCCC-CccccC-CCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeC
Q psy9039 25 PEITANMTRLCAEIRKVLPPSVPVGVQHGVIVENMHDV-PYVLEA-ESGPEITANMTRLCAEIRKVLPPSVPVGVQILSG 102 (251)
Q Consensus 25 P~~~~~~~~i~~~a~~~a~~l~~~Gv~D~i~ieN~~~~-Pf~~p~-~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N 102 (251)
|.--.|.+.+.+.|.+=.+.-.+.|+ .+++ -++++. |=+.|- -.|+-+.+.+ ++++++++++. +|+.--.+-
T Consensus 48 PCsies~e~~~~~A~~lk~~~~~~~~-~~v~-k~~f~KapRTs~~sf~Glg~~~GL-~~L~~~~~e~G--Lpv~Tev~D- 121 (298)
T 3fs2_A 48 PCQMETRDHAFEMAGRLKEMTDKLGI-GLVY-KSSFDKANRTSLKAARGIGLEKAL-EVFSDLKKEYG--FPVLTDIHT- 121 (298)
T ss_dssp CSBCCCHHHHHHHHHHHHHHHHHHTC-CEEE-ECBCCCCC---------CCHHHHH-HHHHHHHHHHC--CCEEEECCS-
T ss_pred CCcCCCHHHHHHHHHHHHHHHHHcCC-cEEE-EcccccCCCCCCCCcCCcCHHHHH-HHHHHHHHhcC--CeEEEEeCC-
Confidence 44445666666555543332233456 5553 233332 222110 0122233333 35677777778 788776653
Q ss_pred ChHHHHHHHHHcCccceecccccccccCCCceeecCcchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHh
Q psy9039 103 CNKAALATAQAAGLDFIRAESFVFGHMADEGLMNAQAGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAA 182 (251)
Q Consensus 103 ~~~~~~~ia~a~g~~Fir~~~~~~~~~~~~Gli~~da~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a 182 (251)
..+....... .+++++.++-- .-.++++...+.+. .|-+ |.|... +...+...++..
T Consensus 122 --~~~v~~l~~~-vd~lkIgA~~~-----------~n~~LLr~va~~gk-PVil------K~Gms~--t~~ei~~ave~i 178 (298)
T 3fs2_A 122 --EEQCAAVAPV-VDVLQIPAFLC-----------RQTDLLIAAARTGR-VVNV------KKGQFL--APWDMKNVLAKI 178 (298)
T ss_dssp --HHHHHHHTTT-CSEEEECGGGT-----------TCHHHHHHHHHTTS-EEEE------ECCTTC--CGGGHHHHHHHH
T ss_pred --HHHHHHHHhh-CCEEEECcccc-----------CCHHHHHHHHccCC-cEEE------eCCCCC--CHHHHHHHHHHH
Confidence 3344443223 56766532111 12235555555553 2222 434321 112334443333
Q ss_pred hhccccEEEec--CCCCCCC---CCHHHHHHHHhcCCCCEEE
Q psy9039 183 SFFLSDGLIIT--GNATGDP---ADVSQLMSVKNAVDLPILI 219 (251)
Q Consensus 183 ~~~~~D~v~VT--G~~~g~~---~~~~~l~~vr~~~~~PV~v 219 (251)
...|.+-+++. |...+.. .++..+..+|+ +.+||++
T Consensus 179 ~~~Gn~~iiL~erg~~y~~~~~~vdl~~i~~lk~-~~~PV~~ 219 (298)
T 3fs2_A 179 TESGNPNVLATERGVSFGYNTLVSDMRALPIMAG-LGAPVIF 219 (298)
T ss_dssp HTTTCCCEEEEECCEECSSSCEECCTTHHHHHHT-TTSCEEE
T ss_pred HHcCCCeEEEEECCCCCCCCCCccCHHHHHHHHH-cCCcEEE
Confidence 33455444442 3322222 25677888898 8999988
No 443
>4e4f_A Mannonate dehydratase; magnesium binding, enzyme function initiative, isomerase; 2.00A {Pectobacterium carotovorum subsp}
Probab=60.14 E-value=8.1 Score=35.49 Aligned_cols=87 Identities=11% Similarity=0.165 Sum_probs=54.9
Q ss_pred hhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCCCCCC-CCHHHHHHHHhcCCCCEEE
Q psy9039 141 PLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNATGDP-ADVSQLMSVKNAVDLPILI 219 (251)
Q Consensus 141 e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~g~~-~~~~~l~~vr~~~~~PV~v 219 (251)
.+...|+.+|. ++.+.-|.+-. + +.....+.++..+.++++.+- ...+ .+.+.++++|+.+++||+.
T Consensus 217 ~v~avR~a~G~-d~~L~vDaN~~----~--~~~~A~~~~~~L~~~~i~~iE-----eP~~~~d~~~~~~l~~~~~iPIa~ 284 (426)
T 4e4f_A 217 LFEAVRDKFGF-NEHLLHDMHHR----L--TPIEAARFGKSVEDYRLFWME-----DPTPAENQACFRLIRQHTVTPIAV 284 (426)
T ss_dssp HHHHHHHHHTT-SSEEEEECTTC----S--CHHHHHHHHHHTGGGCCSEEE-----CCSCCSSGGGGHHHHTTCCSCEEE
T ss_pred HHHHHHHHhCC-CCEEEEECCCC----C--CHHHHHHHHHHHhhcCCCEEE-----CCCChHHHHHHHHHHhcCCCCEEe
Confidence 35567788874 66666554311 1 112222333444446777752 1122 2467788999999999999
Q ss_pred ecCC-ChHhHHHhhc---CCEEEE
Q psy9039 220 GSGV-TSDNVEHYMT---ADALII 239 (251)
Q Consensus 220 G~GI-~~~~v~~~~~---ADGvIV 239 (251)
+--+ +++++.+++. +|.+.+
T Consensus 285 dE~~~~~~~~~~~i~~ga~d~v~~ 308 (426)
T 4e4f_A 285 GEVFNSIWDCKQLIEEQLIDYIRT 308 (426)
T ss_dssp CTTCCSGGGTHHHHHTTCCSEECC
T ss_pred CCCcCCHHHHHHHHHcCCCCEEEe
Confidence 9999 6888888883 888764
No 444
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=59.94 E-value=8 Score=34.62 Aligned_cols=92 Identities=13% Similarity=0.120 Sum_probs=56.9
Q ss_pred cCcchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCCCCCCC-CHHHHHHHHhcCCC
Q psy9039 137 AQAGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNATGDPA-DVSQLMSVKNAVDL 215 (251)
Q Consensus 137 ~da~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~g~~~-~~~~l~~vr~~~~~ 215 (251)
.|.+.+...|+.+|. ++.+.-|.+-. + +.....+.++..+.++++.+- ...++ +.+.++++++.+++
T Consensus 169 ~d~~~v~avR~~~g~-~~~l~vDaN~~----~--~~~~A~~~~~~l~~~~i~~iE-----qP~~~~~~~~~~~l~~~~~i 236 (368)
T 3q45_A 169 LDVERIRMIREAAGD-SITLRIDANQG----W--SVETAIETLTLLEPYNIQHCE-----EPVSRNLYTALPKIRQACRI 236 (368)
T ss_dssp HHHHHHHHHHHHHCS-SSEEEEECTTC----B--CHHHHHHHHHHHGGGCCSCEE-----CCBCGGGGGGHHHHHHTCSS
T ss_pred HHHHHHHHHHHHhCC-CCeEEEECCCC----C--ChHHHHHHHHHHhhcCCCEEE-----CCCChhHHHHHHHHHhhCCC
Confidence 345556677888874 66665453311 1 111222333333446666652 11122 35668899999999
Q ss_pred CEEEecCC-ChHhHHHhhc---CCEEEEe
Q psy9039 216 PILIGSGV-TSDNVEHYMT---ADALIIG 240 (251)
Q Consensus 216 PV~vG~GI-~~~~v~~~~~---ADGvIVG 240 (251)
||+.+--+ +++++.++++ +|.+.+-
T Consensus 237 PIa~dE~~~~~~~~~~~~~~~~~d~v~~k 265 (368)
T 3q45_A 237 PIMADESCCNSFDAERLIQIQACDSFNLK 265 (368)
T ss_dssp CEEESTTCCSHHHHHHHHHTTCCSEEEEC
T ss_pred CEEEcCCcCCHHHHHHHHHcCCCCeEEec
Confidence 99999999 6889988883 8988764
No 445
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=59.60 E-value=9.7 Score=32.70 Aligned_cols=76 Identities=14% Similarity=0.093 Sum_probs=43.0
Q ss_pred CCCcCCCCccEEEEeecCCCCc----cc-c-------CCCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeCChHHHHHH
Q psy9039 43 PPSVPVGVQHGVIVENMHDVPY----VL-E-------AESGPEITANMTRLCAEIRKVLPPSVPVGVQILSGCNKAALAT 110 (251)
Q Consensus 43 ~~l~~~Gv~D~i~ieN~~~~Pf----~~-p-------~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~~~~~~i 110 (251)
+.+.+.|+ |+|.+.|...-++ +. | ...|+.......+.++++++.++ +|+..+.=..+ .....-
T Consensus 183 ~~l~~~G~-d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g~~~~~~~~~~i~~i~~~~~--ipvia~GGI~~-~~d~~~ 258 (311)
T 1ep3_A 183 KAVEAAGA-DGLTMINTLMGVRFDLKTRQPILANITGGLSGPAIKPVALKLIHQVAQDVD--IPIIGMGGVAN-AQDVLE 258 (311)
T ss_dssp HHHHHTTC-SEEEECCCEEECCBCTTTCSBSSTTSCEEEESGGGHHHHHHHHHHHHTTCS--SCEEECSSCCS-HHHHHH
T ss_pred HHHHHcCC-CEEEEeCCCcccccCcccCCccccCCCCcccCccchHHHHHHHHHHHHhcC--CCEEEECCcCC-HHHHHH
Confidence 44678999 9999977321000 00 0 01233222223467888888877 79877765443 233333
Q ss_pred HHHcCccceecc
Q psy9039 111 AQAAGLDFIRAE 122 (251)
Q Consensus 111 a~a~g~~Fir~~ 122 (251)
+.+.|++++..+
T Consensus 259 ~l~~GAd~V~vg 270 (311)
T 1ep3_A 259 MYMAGASAVAVG 270 (311)
T ss_dssp HHHHTCSEEEEC
T ss_pred HHHcCCCEEEEC
Confidence 445678887753
No 446
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=59.58 E-value=26 Score=30.47 Aligned_cols=170 Identities=15% Similarity=0.146 Sum_probs=75.3
Q ss_pred CCCcCCCCccEEEEe-ecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeCChHHHHHHH---HHcCccc
Q psy9039 43 PPSVPVGVQHGVIVE-NMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQILSGCNKAALATA---QAAGLDF 118 (251)
Q Consensus 43 ~~l~~~Gv~D~i~ie-N~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~~~~~~ia---~a~g~~F 118 (251)
+-|++.|+ |||.+- .-+-.|.- .-.+..+-+..+++.++. . +|+.+-+-.|....+...+ ...|++.
T Consensus 40 ~~li~~Gv-~gl~v~GtTGE~~~L----s~eEr~~vi~~~~~~~~g--r--vpViaGvg~~st~~ai~la~~A~~~Gada 110 (306)
T 1o5k_A 40 RYQLENGV-NALIVLGTTGESPTV----NEDEREKLVSRTLEIVDG--K--IPVIVGAGTNSTEKTLKLVKQAEKLGANG 110 (306)
T ss_dssp HHHHHTTC-CEEEESSGGGTGGGC----CHHHHHHHHHHHHHHHTT--S--SCEEEECCCSCHHHHHHHHHHHHHHTCSE
T ss_pred HHHHHcCC-CEEEeCccccchhhC----CHHHHHHHHHHHHHHhCC--C--CeEEEcCCCccHHHHHHHHHHHHhcCCCE
Confidence 55678899 999862 11112221 122333333333333332 2 6887777776644443332 3345544
Q ss_pred eecccccccccCCCceeecCcchhHHHHHhcCC-Ccchh-hhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCC
Q psy9039 119 IRAESFVFGHMADEGLMNAQAGPLLRYRKQIGA-DNVLV-FTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNA 196 (251)
Q Consensus 119 ir~~~~~~~~~~~~Gli~~da~e~~~~r~~l~~-~~i~i-~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~ 196 (251)
+-.- ..-...+..+++.++.+.+-. -++.+ ++++-...|..+ +.+.+.++++ +.-. |.|-+
T Consensus 111 vlv~--------~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l--~~~~~~~La~--~~pn-----IvgiK 173 (306)
T 1o5k_A 111 VLVV--------TPYYNKPTQEGLYQHYKYISERTDLGIVVYNVPGRTGVNV--LPETAARIAA--DLKN-----VVGIX 173 (306)
T ss_dssp EEEE--------CCCSSCCCHHHHHHHHHHHHTTCSSCEEEEECHHHHSCCC--CHHHHHHHHH--HCTT-----EEEEE
T ss_pred EEEC--------CCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCccccCcCC--CHHHHHHHHH--hCCC-----EEEEe
Confidence 3321 111122345566666555421 12333 333332334332 2233333331 2211 22222
Q ss_pred CCCCCCHHHHHHHHhcC-----CCCEEEecCCChHhHHHhh-c-CCEEEEece
Q psy9039 197 TGDPADVSQLMSVKNAV-----DLPILIGSGVTSDNVEHYM-T-ADALIIGSH 242 (251)
Q Consensus 197 ~g~~~~~~~l~~vr~~~-----~~PV~vG~GI~~~~v~~~~-~-ADGvIVGS~ 242 (251)
.. ..+...+.++++.+ +.-|+.|.. +.+...+ . ++|+|-|++
T Consensus 174 ds-sgd~~~~~~~~~~~~~~~~~f~v~~G~d---~~~l~~l~~G~~G~is~~a 222 (306)
T 1o5k_A 174 EA-NPDIDQIDRTVSLTKQARSDFMVWSGND---DRTFYLLCAGGDGVISVVS 222 (306)
T ss_dssp EC-CCCHHHHHHHHHHHHHHCTTCEEEESSG---GGHHHHHHHTCCEEEESGG
T ss_pred CC-CCCHHHHHHHHHhcCCCCCcEEEEECcH---HHHHHHHHCCCCEEEecHH
Confidence 11 12455555555432 455655542 2333333 4 999998865
No 447
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=59.33 E-value=38 Score=29.13 Aligned_cols=170 Identities=12% Similarity=0.105 Sum_probs=74.7
Q ss_pred CCCcCCCCccEEEEe-ecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeCChHHHHHHH---HHcCccc
Q psy9039 43 PPSVPVGVQHGVIVE-NMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQILSGCNKAALATA---QAAGLDF 118 (251)
Q Consensus 43 ~~l~~~Gv~D~i~ie-N~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~~~~~~ia---~a~g~~F 118 (251)
+-+++.|+ |+|.+- .-+-.|.- .-.+..+-+..+++.++. . +|+.+-+-.|....+...+ ...|++.
T Consensus 29 ~~li~~Gv-~gl~~~GttGE~~~L----s~~Er~~v~~~~~~~~~g--r--~pvi~Gvg~~~t~~ai~la~~a~~~Gada 99 (291)
T 3a5f_A 29 EWHIKSKT-DAIIVCGTTGEATTM----TETERKETIKFVIDKVNK--R--IPVIAGTGSNNTAASIAMSKWAESIGVDG 99 (291)
T ss_dssp HHHHHTTC-CEEEESSGGGTGGGS----CHHHHHHHHHHHHHHHTT--S--SCEEEECCCSSHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHcCC-CEEEECccccChhhC----CHHHHHHHHHHHHHHhCC--C--CcEEEeCCcccHHHHHHHHHHHHhcCCCE
Confidence 55678999 999862 11112211 122333333333333332 2 6887777776644444333 3344444
Q ss_pred eecccccccccCCCceeecCcchhHHHHHhcCC-Ccchh-hhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCC
Q psy9039 119 IRAESFVFGHMADEGLMNAQAGPLLRYRKQIGA-DNVLV-FTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNA 196 (251)
Q Consensus 119 ir~~~~~~~~~~~~Gli~~da~e~~~~r~~l~~-~~i~i-~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~ 196 (251)
+-.- ..-...+..+++.++.+.+-. -++.+ ++++-...|.. .+.+.+.+.++.-. |.|-+
T Consensus 100 vlv~--------~P~y~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~-----l~~~~~~~La~~pn-----ivgiK 161 (291)
T 3a5f_A 100 LLVI--------TPYYNKTTQKGLVKHFKAVSDAVSTPIIIYNVPGRTGLN-----ITPGTLKELCEDKN-----IVAVX 161 (291)
T ss_dssp EEEE--------CCCSSCCCHHHHHHHC-CTGGGCCSCEEEEECHHHHSCC-----CCHHHHHHHTTSTT-----EEEEE
T ss_pred EEEc--------CCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCC-----CCHHHHHHHHcCCC-----EEEEe
Confidence 3321 111112334555555444321 12222 33333233433 23444444443211 22222
Q ss_pred CCCCCCHHHHHHHHhcC--CCCEEEecCCChHhHHHhhc-CCEEEEece
Q psy9039 197 TGDPADVSQLMSVKNAV--DLPILIGSGVTSDNVEHYMT-ADALIIGSH 242 (251)
Q Consensus 197 ~g~~~~~~~l~~vr~~~--~~PV~vG~GI~~~~v~~~~~-ADGvIVGS~ 242 (251)
. ...+...+.++++.+ +.-|+.|.. .--+..+.. ++|+|-|++
T Consensus 162 ~-s~gd~~~~~~~~~~~~~~f~v~~G~d--~~~~~~l~~G~~G~is~~a 207 (291)
T 3a5f_A 162 E-ASGNISQIAQIKALCGDKLDIYSGND--DQIIPILALGGIGVISVLA 207 (291)
T ss_dssp E-CSCCHHHHHHHHHHHGGGSEEEESCG--GGHHHHHHTTCCEEEESGG
T ss_pred C-CCCCHHHHHHHHHhcCCCeEEEeCcH--HHHHHHHHCCCCEEEecHH
Confidence 1 112455666665543 355555432 222334445 999998875
No 448
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=59.19 E-value=19 Score=31.03 Aligned_cols=66 Identities=23% Similarity=0.266 Sum_probs=38.4
Q ss_pred HHHHHHHhhhccccEEEecCCCCCCCC--CH-HHHHHHHhcC-CCCEEEecCC-Ch-HhHH---Hhhc--CCEEEEece
Q psy9039 175 ITETAKAASFFLSDGLIITGNATGDPA--DV-SQLMSVKNAV-DLPILIGSGV-TS-DNVE---HYMT--ADALIIGSH 242 (251)
Q Consensus 175 i~~~a~~a~~~~~D~v~VTG~~~g~~~--~~-~~l~~vr~~~-~~PV~vG~GI-~~-~~v~---~~~~--ADGvIVGS~ 242 (251)
+++.++..... +|++++.|+. |+.. +. ++.+-++... ++||++|-|- +. +.++ .+.+ |||+.+-+-
T Consensus 21 l~~lv~~li~~-v~gl~v~Gtt-GE~~~Ls~~Er~~v~~~~~~rvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 97 (283)
T 2pcq_A 21 FRELAQALEPL-VDGLLVYGSN-GEGVHLTPEERARGLRALRPRKPFLVGLMEETLPQAEGALLEAKAAGAMALLATPP 97 (283)
T ss_dssp HHHHHHHHGGG-SSCCEETCTT-TTGGGSCHHHHHHHHHTCCCSSCCEEEECCSSHHHHHHHHHHHHHHTCSEEEECCC
T ss_pred HHHHHHHHHhh-CCEEEECCcC-cCchhcCHHHHHHHHHHHHhCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEecCC
Confidence 33444433346 9999888874 5543 23 3333333323 7999999997 43 4333 2223 999988653
No 449
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=58.97 E-value=12 Score=32.22 Aligned_cols=77 Identities=10% Similarity=-0.020 Sum_probs=44.2
Q ss_pred CCCcCCCCccEEEEeecC----------CCCcccc-----CCCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeCChHHH
Q psy9039 43 PPSVPVGVQHGVIVENMH----------DVPYVLE-----AESGPEITANMTRLCAEIRKVLPPSVPVGVQILSGCNKAA 107 (251)
Q Consensus 43 ~~l~~~Gv~D~i~ieN~~----------~~Pf~~p-----~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~~~~ 107 (251)
+.+++.|+ |+|.+.|-. +.|...+ -..|+.......+.++++++.++..+|+..+.=...+...
T Consensus 179 ~~~~~~G~-d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~~~~i~~v~~~~~~~ipvi~~GGI~~~~da 257 (311)
T 1jub_A 179 EILNQFPL-TYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALANVRAFYTRLKPEIQIIGTGGIETGQDA 257 (311)
T ss_dssp HHHTTSCC-CEEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHHHHHHHHHHTTSCTTSEEEEESSCCSHHHH
T ss_pred HHHHHcCC-cEEEecCCCCcCceeccCCCCcccccCCCCCccccccccHHHHHHHHHHHHhcCCCCCEEEECCCCCHHHH
Confidence 45578899 999998864 1111100 0013332333457888999888211798877655443333
Q ss_pred HHHHHHcCccceec
Q psy9039 108 LATAQAAGLDFIRA 121 (251)
Q Consensus 108 ~~ia~a~g~~Fir~ 121 (251)
.. +.+.|++++..
T Consensus 258 ~~-~l~~GAd~V~v 270 (311)
T 1jub_A 258 FE-HLLCGATMLQI 270 (311)
T ss_dssp HH-HHHHTCSEEEE
T ss_pred HH-HHHcCCCEEEE
Confidence 33 23568888876
No 450
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=58.79 E-value=30 Score=28.95 Aligned_cols=63 Identities=24% Similarity=0.188 Sum_probs=44.6
Q ss_pred ccHHHHHHHhhhccccEEEecCCCCCCCCCHHHHHHHHhcCCCCEEEecCC-ChHhHHHhhc--CCEEE
Q psy9039 173 VDITETAKAASFFLSDGLIITGNATGDPADVSQLMSVKNAVDLPILIGSGV-TSDNVEHYMT--ADALI 238 (251)
Q Consensus 173 ~~i~~~a~~a~~~~~D~v~VTG~~~g~~~~~~~l~~vr~~~~~PV~vG~GI-~~~~v~~~~~--ADGvI 238 (251)
+....+++.....|++.+-||-.. +...+.|+++|+..+-+++-.|-+ |.++++++.. |+-++
T Consensus 25 ~~a~~~a~al~~gGi~~iEvt~~t---~~a~~~I~~l~~~~p~~~IGAGTVlt~~~a~~ai~AGA~fiv 90 (217)
T 3lab_A 25 VHAIPMAKALVAGGVHLLEVTLRT---EAGLAAISAIKKAVPEAIVGAGTVCTADDFQKAIDAGAQFIV 90 (217)
T ss_dssp GGHHHHHHHHHHTTCCEEEEETTS---TTHHHHHHHHHHHCTTSEEEEECCCSHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCC---ccHHHHHHHHHHHCCCCeEeeccccCHHHHHHHHHcCCCEEE
Confidence 455666666666799999998653 223688999998875555444445 7999999886 77654
No 451
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=58.74 E-value=16 Score=32.64 Aligned_cols=58 Identities=17% Similarity=0.295 Sum_probs=34.7
Q ss_pred hccccEEEecCCCCCCCC--CH-HHHH--HHHhcCCCCEEEecCC-Ch-HhHH---Hhhc--CCEEEEece
Q psy9039 184 FFLSDGLIITGNATGDPA--DV-SQLM--SVKNAVDLPILIGSGV-TS-DNVE---HYMT--ADALIIGSH 242 (251)
Q Consensus 184 ~~~~D~v~VTG~~~g~~~--~~-~~l~--~vr~~~~~PV~vG~GI-~~-~~v~---~~~~--ADGvIVGS~ 242 (251)
..|+|++++.|+. |+.. +. ++.+ +.....++||++|-|- +. +.++ .+.+ |||+.|-+-
T Consensus 58 ~~Gv~Gl~v~GtT-GE~~~Ls~eEr~~vi~~~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P 127 (344)
T 2hmc_A 58 ADGMSAVVYCGSM-GDWPLLTDEQRMEGVERLVKAGIPVIVGTGAVNTASAVAHAVHAQKVGAKGLMVIPR 127 (344)
T ss_dssp HTTCCCEEESSGG-GTGGGSCHHHHHHHHHHHHHTTCCEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCC
T ss_pred HcCCCEEEeCccC-cChhhCCHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 3599999998873 4432 22 2222 2211237999999997 53 3333 2223 999988653
No 452
>1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A
Probab=58.70 E-value=20 Score=31.88 Aligned_cols=87 Identities=9% Similarity=0.141 Sum_probs=56.4
Q ss_pred cchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCCCCC-CCCHHHHHHHHhcCCCCE
Q psy9039 139 AGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNATGD-PADVSQLMSVKNAVDLPI 217 (251)
Q Consensus 139 a~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~g~-~~~~~~l~~vr~~~~~PV 217 (251)
.+.+...|+.+ +++.+.-|.+- + + +. .. .+.++..+.++++.+- ... +.+.+.++++++.+++||
T Consensus 177 ~~~v~avr~a~--~~~~l~vDan~--~--~-~~-~~-~~~~~~l~~~~i~~iE-----qP~~~~d~~~~~~l~~~~~ipI 242 (375)
T 1r0m_A 177 VQPVRATREAF--PDIRLTVDANS--A--Y-TL-AD-AGRLRQLDEYDLTYIE-----QPLAWDDLVDHAELARRIRTPL 242 (375)
T ss_dssp HHHHHHHHHHC--TTSCEEEECTT--C--C-CG-GG-HHHHHTTGGGCCSCEE-----CCSCTTCSHHHHHHHHHCSSCE
T ss_pred HHHHHHHHHHc--CCCeEEEeCCC--C--C-CH-HH-HHHHHHHHhCCCcEEE-----CCCCcccHHHHHHHHHhCCCCE
Confidence 34455556666 46777655431 1 1 22 23 4455555556777652 112 235678889999999999
Q ss_pred EEecCC-ChHhHHHhhc---CCEEEE
Q psy9039 218 LIGSGV-TSDNVEHYMT---ADALII 239 (251)
Q Consensus 218 ~vG~GI-~~~~v~~~~~---ADGvIV 239 (251)
+.+--+ +++++.+++. +|.+.+
T Consensus 243 a~dE~~~~~~~~~~~i~~~~~d~v~i 268 (375)
T 1r0m_A 243 CLDESVASASDARKALALGAGGVINL 268 (375)
T ss_dssp EESTTCCSHHHHHHHHHHTSCSEEEE
T ss_pred EecCccCCHHHHHHHHHhCCCCEEEE
Confidence 999999 6899998883 999887
No 453
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=58.63 E-value=10 Score=31.72 Aligned_cols=65 Identities=14% Similarity=0.102 Sum_probs=44.2
Q ss_pred ccHHHHHHHhhhccccEEEecCCCCCCCCCHHHHHHHHhcCCCCEEEecCC--ChHhHHHhhc--CCEEEEec
Q psy9039 173 VDITETAKAASFFLSDGLIITGNATGDPADVSQLMSVKNAVDLPILIGSGV--TSDNVEHYMT--ADALIIGS 241 (251)
Q Consensus 173 ~~i~~~a~~a~~~~~D~v~VTG~~~g~~~~~~~l~~vr~~~~~PV~vG~GI--~~~~v~~~~~--ADGvIVGS 241 (251)
+...+.++.+...|++.+-+|=. + ....+.++++++... .+++|.|. +.+++..++. ||++..|.
T Consensus 38 ~~~~~~~~al~~gGv~~iel~~k-~--~~~~~~i~~l~~~~~-~~~igagtvl~~d~~~~A~~aGAd~v~~p~ 106 (225)
T 1mxs_A 38 EDILPLADALAAGGIRTLEVTLR-S--QHGLKAIQVLREQRP-ELCVGAGTVLDRSMFAAVEAAGAQFVVTPG 106 (225)
T ss_dssp GGHHHHHHHHHHTTCCEEEEESS-S--THHHHHHHHHHHHCT-TSEEEEECCCSHHHHHHHHHHTCSSEECSS
T ss_pred HHHHHHHHHHHHCCCCEEEEecC-C--ccHHHHHHHHHHhCc-ccEEeeCeEeeHHHHHHHHHCCCCEEEeCC
Confidence 34556666666679999988832 1 223466777777663 45566665 6888888886 99998774
No 454
>3tji_A Mandelate racemase/muconate lactonizing enzyme, N domain protein; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.80A {Enterobacter SP}
Probab=58.52 E-value=7.1 Score=35.80 Aligned_cols=88 Identities=14% Similarity=0.149 Sum_probs=55.1
Q ss_pred chhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCCCCCCC-CHHHHHHHHhcCCCCEE
Q psy9039 140 GPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNATGDPA-DVSQLMSVKNAVDLPIL 218 (251)
Q Consensus 140 ~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~g~~~-~~~~l~~vr~~~~~PV~ 218 (251)
+.+...|+.+|. ++.+.-|.+-. + +.....+.++..+.++++.+- ...++ +.+.++++|+.+++||+
T Consensus 210 e~v~avR~avG~-d~~L~vDaN~~----~--~~~~A~~~~~~Le~~~i~~iE-----qP~~~~d~~~~~~l~~~~~iPIa 277 (422)
T 3tji_A 210 EMFHALREKYGW-KLHILHDVHER----L--FPQQAVQLAKQLEPFQPYFIE-----DILPPQQSAWLEQVRQQSCVPLA 277 (422)
T ss_dssp HHHHHHHHHHCS-SSEEEEECTTC----S--CHHHHHHHHHHHGGGCCSEEE-----CCSCGGGGGGHHHHHHHCCCCEE
T ss_pred HHHHHHHHHcCC-CCEEEEECCCC----C--CHHHHHHHHHHHHhhCCCeEE-----CCCChhhHHHHHHHHhhCCCCEE
Confidence 335567788874 66676554411 1 112222333444446777652 11222 45678899999999999
Q ss_pred EecCC-ChHhHHHhhc---CCEEEE
Q psy9039 219 IGSGV-TSDNVEHYMT---ADALII 239 (251)
Q Consensus 219 vG~GI-~~~~v~~~~~---ADGvIV 239 (251)
.+--+ +++++.++++ +|.+.+
T Consensus 278 ~dE~~~~~~~~~~ll~~ga~d~v~~ 302 (422)
T 3tji_A 278 LGELFNNPAEWHDLIVNRRIDFIRC 302 (422)
T ss_dssp ECTTCCSGGGTHHHHHTTCCSEECC
T ss_pred EeCCcCCHHHHHHHHhcCCCCEEec
Confidence 99999 6888888883 888765
No 455
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=58.07 E-value=12 Score=34.33 Aligned_cols=89 Identities=16% Similarity=0.110 Sum_probs=54.9
Q ss_pred cchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCCCCC-CCCHHHHHHHHhcCC-CC
Q psy9039 139 AGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNATGD-PADVSQLMSVKNAVD-LP 216 (251)
Q Consensus 139 a~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~g~-~~~~~~l~~vr~~~~-~P 216 (251)
.+.+...|+.+|. ++.+.-|.+ .+ + +.....+.++..+.++++.+- ... +.+.+.++++|+.++ +|
T Consensus 216 ~e~v~avR~avG~-d~~l~vDan--~~--~--~~~eai~~~~~L~~~~i~~iE-----qP~~~~d~~~~~~l~~~~~~iP 283 (428)
T 3bjs_A 216 IERVRHVRKVLGD-EVDILTDAN--TA--Y--TMADARRVLPVLAEIQAGWLE-----EPFACNDFASYREVAKITPLVP 283 (428)
T ss_dssp HHHHHHHHHHHCT-TSEEEEECT--TC--C--CHHHHHHHHHHHHHTTCSCEE-----CCSCTTCHHHHHHHTTTCSSSC
T ss_pred HHHHHHHHHhcCC-CCEEEEECC--CC--C--CHHHHHHHHHHHHhcCCCEEE-----CCCCccCHHHHHHHHHhCCCCc
Confidence 3444556777764 556654443 11 1 112222333444446777652 112 235788999999998 99
Q ss_pred EEEecCC-ChHhHHHhhc---CCEEEE
Q psy9039 217 ILIGSGV-TSDNVEHYMT---ADALII 239 (251)
Q Consensus 217 V~vG~GI-~~~~v~~~~~---ADGvIV 239 (251)
|+.+..+ +++.+.+++. +|.+.+
T Consensus 284 Ia~dE~~~~~~~~~~~i~~~~~d~v~i 310 (428)
T 3bjs_A 284 IAAGENHYTRFEFGQMLDAGAVQVWQP 310 (428)
T ss_dssp EEECTTCCSHHHHHHHHTTCCEEEECC
T ss_pred EEcCCCcCCHHHHHHHHHhCCCCEEEe
Confidence 9999999 7899999884 777754
No 456
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=57.92 E-value=6.3 Score=34.27 Aligned_cols=45 Identities=20% Similarity=0.198 Sum_probs=30.7
Q ss_pred HHHHHHhhCCCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEE
Q psy9039 34 LCAEIRKVLPPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQ 98 (251)
Q Consensus 34 i~~~a~~~a~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn 98 (251)
=.+.+++++++++++|+ |+|.+|- + | ....++++.+.++ +|+-++
T Consensus 166 ~~~~ai~Ra~ay~eAGA-d~i~~e~---~----~----------~~~~~~~i~~~~~--~P~n~~ 210 (275)
T 2ze3_A 166 RLAETVRRGQAYADAGA-DGIFVPL---A----L----------QSQDIRALADALR--VPLNVM 210 (275)
T ss_dssp HHHHHHHHHHHHHHTTC-SEEECTT---C----C----------CHHHHHHHHHHCS--SCEEEE
T ss_pred hHHHHHHHHHHHHHCCC-CEEEECC---C----C----------CHHHHHHHHHhcC--CCEEEe
Confidence 35778888899999999 9997521 1 1 1234566777777 797444
No 457
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=57.37 E-value=14 Score=32.50 Aligned_cols=178 Identities=16% Similarity=0.162 Sum_probs=93.0
Q ss_pred cCCCCccEEEEe------ecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEE---eeCCh--HHHHHHHHHc
Q psy9039 46 VPVGVQHGVIVE------NMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQI---LSGCN--KAALATAQAA 114 (251)
Q Consensus 46 ~~~Gv~D~i~ie------N~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~---~~N~~--~~~~~ia~a~ 114 (251)
++.|+ |+|.+. +.+|.| | .++++..-|...++++.+.++ .|+.+.. |-|+. ......-...
T Consensus 39 e~aGf-~ai~vs~~s~a~~~~G~p--D---~~~vt~~em~~~~~~I~r~~~--~PviaD~d~Gyg~~~~v~~~v~~l~~a 110 (298)
T 3eoo_A 39 EAVGF-KAVYLSGGGVAANSLGIP--D---LGISTMDDVLVDANRITNATN--LPLLVDIDTGWGGAFNIARTIRSFIKA 110 (298)
T ss_dssp HHHTC-SCEEECHHHHHHHTTCCC--S---SSCCCHHHHHHHHHHHHHHCC--SCEEEECTTCSSSHHHHHHHHHHHHHT
T ss_pred HHcCC-CEEEECcHHHHHHhcCCC--C---CCCCCHHHHHHHHHHHHhhcC--CeEEEECCCCCCCHHHHHHHHHHHHHh
Confidence 45689 999875 244433 2 367788888888888888877 7876654 32220 1111111224
Q ss_pred Cccceecccccc-cccCCC-c-eeecC---cchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhh-h--c
Q psy9039 115 GLDFIRAESFVF-GHMADE-G-LMNAQ---AGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAAS-F--F 185 (251)
Q Consensus 115 g~~Fir~~~~~~-~~~~~~-G-li~~d---a~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~-~--~ 185 (251)
|+.-+...-.++ ..+|-. | -+.|. ...+...++.....+..|++...... ...+++..+.+. + .
T Consensus 111 Gaagv~iEDq~~~k~cGh~~gk~l~~~~e~~~ri~Aa~~A~~~~~~~I~ARTDa~~-------~~gldeai~Ra~ay~~A 183 (298)
T 3eoo_A 111 GVGAVHLEDQVGQKRCGHRPGKECVPAGEMVDRIKAAVDARTDETFVIMARTDAAA-------AEGIDAAIERAIAYVEA 183 (298)
T ss_dssp TCSEEEEECBCCCCCTTCCCCCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECTHH-------HHHHHHHHHHHHHHHHT
T ss_pred CCeEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHhccCCCeEEEEeehhhh-------hcCHHHHHHHHHhhHhc
Confidence 555544421111 011100 1 12222 12222222222223455544221110 123445555554 3 5
Q ss_pred cccEEEecCCCCCCCCCHHHHHHHHhcCCCCEEEe---cCCCh-HhHHHhhc--CCEEEEeceE
Q psy9039 186 LSDGLIITGNATGDPADVSQLMSVKNAVDLPILIG---SGVTS-DNVEHYMT--ADALIIGSHF 243 (251)
Q Consensus 186 ~~D~v~VTG~~~g~~~~~~~l~~vr~~~~~PV~vG---~GI~~-~~v~~~~~--ADGvIVGS~~ 243 (251)
|+|++.+-|.+ +.+.++++.+.+++|+++. +|-+| -+..++.. ..-+++|+.+
T Consensus 184 GAD~if~~~~~-----~~ee~~~~~~~~~~Pl~~n~~~~g~tp~~~~~eL~~lGv~~v~~~~~~ 242 (298)
T 3eoo_A 184 GADMIFPEAMK-----TLDDYRRFKEAVKVPILANLTEFGSTPLFTLDELKGANVDIALYCCGA 242 (298)
T ss_dssp TCSEEEECCCC-----SHHHHHHHHHHHCSCBEEECCTTSSSCCCCHHHHHHTTCCEEEECSHH
T ss_pred CCCEEEeCCCC-----CHHHHHHHHHHcCCCeEEEeccCCCCCCCCHHHHHHcCCeEEEEchHH
Confidence 99999998753 5788888888888998663 55443 33445443 7888887654
No 458
>3tr2_A Orotidine 5'-phosphate decarboxylase; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.00A {Coxiella burnetii}
Probab=57.08 E-value=19 Score=30.49 Aligned_cols=60 Identities=18% Similarity=0.264 Sum_probs=38.0
Q ss_pred HHHHHhhhccccEEEecCCCCCCCCCHHHHHHHHhcC-CCCEEEecCCChHh-----------HHHhhc--CCEEEEece
Q psy9039 177 ETAKAASFFLSDGLIITGNATGDPADVSQLMSVKNAV-DLPILIGSGVTSDN-----------VEHYMT--ADALIIGSH 242 (251)
Q Consensus 177 ~~a~~a~~~~~D~v~VTG~~~g~~~~~~~l~~vr~~~-~~PV~vG~GI~~~~-----------v~~~~~--ADGvIVGS~ 242 (251)
+.++.+...|+|+++.+.. ...++|+.+ +-.+++=-||.++. ..+++. ||-++|||.
T Consensus 148 ~~A~~a~~~g~~GvV~s~~---------e~~~ir~~~~~~fl~vtPGIr~~g~~~~dQ~rv~t~~~~~~aGad~lVvGr~ 218 (239)
T 3tr2_A 148 RMATLAKSAGLDGVVCSAQ---------EAALLRKQFDRNFLLVTPGIRLETDEKGDQKRVMTPRAAIQAGSDYLVIGRP 218 (239)
T ss_dssp HHHHHHHHHTCCEEECCHH---------HHHHHHTTCCTTSEEEECCBC----------CCBCHHHHHHHTCSEEEECHH
T ss_pred HHHHHHHHcCCCEEEECch---------hHHHHHHhcCCCcEEECCCcCCCCCCcCcccccCCHHHHHHcCCCEEEEChH
Confidence 3444444468999886632 245677776 34577777886432 445554 999999998
Q ss_pred Eee
Q psy9039 243 FKQ 245 (251)
Q Consensus 243 ~~~ 245 (251)
+-+
T Consensus 219 I~~ 221 (239)
T 3tr2_A 219 ITQ 221 (239)
T ss_dssp HHT
T ss_pred HhC
Confidence 754
No 459
>3ist_A Glutamate racemase; structural genomics, cell WALL biogenesis/degradation, isomerase, peptidoglycan synthesis; HET: MSE; 1.65A {Listeria monocytogenes} PDB: 3hfr_A* 3isv_A*
Probab=56.90 E-value=11 Score=32.50 Aligned_cols=67 Identities=16% Similarity=0.240 Sum_probs=45.8
Q ss_pred CCCcceEEEeeeecccccccCCCCCCCcchHHHHHHHHHhhCCCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHH
Q psy9039 1 MPQKHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTR 80 (251)
Q Consensus 1 ~~~~~~~~~~~~~~~p~~~~~pG~P~~~~~~~~i~~~a~~~a~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~ 80 (251)
||+.|-+-+.----.|| |. .|.++|.+.+.+.++.|.+.|+ |.|.|. =. | +..
T Consensus 28 lP~~~~iy~~D~a~~PY-----G~----ks~~~i~~~~~~~~~~L~~~g~-~~IVIA------CN--------T---a~~ 80 (269)
T 3ist_A 28 LPHEQVYYLGDTARCPY-----GP----RDKEEVAKFTWEMTNFLVDRGI-KMLVIA------CN--------T---ATA 80 (269)
T ss_dssp CTTCCEEEEECGGGCCC-----TT----SCHHHHHHHHHHHHHHHHHTTC-SEEEEC------CH--------H---HHH
T ss_pred CCCCcEEEEeCCCCCCC-----CC----CCHHHHHHHHHHHHHHHHHCCC-CEEEEe------CC--------C---ccH
Confidence 35555554444444566 52 5788999999999999999999 999861 11 1 222
Q ss_pred -HHHHHHHhCCCCccEE
Q psy9039 81 -LCAEIRKVLPPSVPVG 96 (251)
Q Consensus 81 -~i~~vr~~~~~~~P~G 96 (251)
.+.++|+.++ +|+.
T Consensus 81 ~al~~lr~~~~--iPvi 95 (269)
T 3ist_A 81 AALYDIREKLD--IPVI 95 (269)
T ss_dssp HHHHHHHHHCS--SCEE
T ss_pred HHHHHHHHhcC--CCEE
Confidence 3678888888 7853
No 460
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=56.75 E-value=95 Score=27.77 Aligned_cols=168 Identities=15% Similarity=0.135 Sum_probs=82.7
Q ss_pred CCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeCChHHHHHHHHHcCccceecc
Q psy9039 43 PPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQILSGCNKAALATAQAAGLDFIRAE 122 (251)
Q Consensus 43 ~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~~~~~~ia~a~g~~Fir~~ 122 (251)
+.|.+.|+ |.|++ |+|-+-| . +...++++++.... .++ +...+.. ...+..|...|.+.++.-
T Consensus 32 ~~L~~~Gv-~~IE~----g~p~~~~-----~----~~~~~~~i~~~~~~-~~v-~~~~r~~-~~di~~a~~~g~~~v~i~ 94 (382)
T 2ztj_A 32 KALDEFGI-EYIEV----TTPVASP-----Q----SRKDAEVLASLGLK-AKV-VTHIQCR-LDAAKVAVETGVQGIDLL 94 (382)
T ss_dssp HHHHHHTC-SEEEE----CCTTSCH-----H----HHHHHHHHHTSCCS-SEE-EEEEESC-HHHHHHHHHTTCSEEEEE
T ss_pred HHHHHcCc-CEEEE----cCCcCCH-----H----HHHHHHHHHhcCCC-cEE-EEEcccC-hhhHHHHHHcCCCEEEEE
Confidence 55778899 99985 6664433 2 34455666654331 233 2222221 333556666788877642
Q ss_pred cccccccCC-----Cc----eeecCcchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEec
Q psy9039 123 SFVFGHMAD-----EG----LMNAQAGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIIT 193 (251)
Q Consensus 123 ~~~~~~~~~-----~G----li~~da~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VT 193 (251)
.. .++ -+ -......+..++.++.|. .+.+.... .-+ . -++...+.+.++.+... +|.+.+-
T Consensus 95 --~~--~s~~~~~~~~~s~~e~l~~~~~~v~~ak~~g~-~~~v~~~~--ed~-~-~~~~~~~~~~~~~~~~~-a~~i~l~ 164 (382)
T 2ztj_A 95 --FG--TSKYLRAPHGRDIPRIIEEAKEVIAYIREAAP-HVEVRFSA--EDT-F-RSEEQDLLAVYEAVAPY-VDRVGLA 164 (382)
T ss_dssp --EC--C--------CCCHHHHHHHHHHHHHHHHHHCT-TSEEEEEE--TTT-T-TSCHHHHHHHHHHHGGG-CSEEEEE
T ss_pred --ec--cCHHHHHHhCCCHHHHHHHHHHHHHHHHHcCC-CEEEEEEE--EeC-C-CCCHHHHHHHHHHHHHh-cCEEEec
Confidence 11 111 00 001124566677777772 11221111 111 1 12234455666666656 8888774
Q ss_pred CCCCCCC-C-CH-HHHHHHHhc--CCCCEEEe----cCCChHh-HHHhhc-CCEEE
Q psy9039 194 GNATGDP-A-DV-SQLMSVKNA--VDLPILIG----SGVTSDN-VEHYMT-ADALI 238 (251)
Q Consensus 194 G~~~g~~-~-~~-~~l~~vr~~--~~~PV~vG----~GI~~~~-v~~~~~-ADGvI 238 (251)
-+ .|.. | .. ++++.+|+. .++|+-+= +|.--.| ++.+.. ||-+-
T Consensus 165 DT-~G~~~P~~~~~lv~~l~~~~~~~~~i~~H~Hnd~GlAvAN~laAv~aGa~~vd 219 (382)
T 2ztj_A 165 DT-VGVATPRQVYALVREVRRVVGPRVDIEFHGHNDTGCAIANAYEAIEAGATHVD 219 (382)
T ss_dssp ET-TSCCCHHHHHHHHHHHHHHHTTTSEEEEEEBCTTSCHHHHHHHHHHTTCCEEE
T ss_pred CC-CCCCCHHHHHHHHHHHHHhcCCCCeEEEEeCCCccHHHHHHHHHHHhCCCEEE
Confidence 33 2222 2 22 678888887 56675544 5664444 333334 76543
No 461
>3tcs_A Racemase, putative; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, TIM barrel; HET: PG4; 1.88A {Roseobacter denitrificans} PDB: 3u4f_A 3t9p_A 3t8q_A
Probab=56.74 E-value=18 Score=32.70 Aligned_cols=86 Identities=14% Similarity=0.117 Sum_probs=54.1
Q ss_pred hHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCCCCCC-CCHHHHHHHHhcCCCCEEEe
Q psy9039 142 LLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNATGDP-ADVSQLMSVKNAVDLPILIG 220 (251)
Q Consensus 142 ~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~g~~-~~~~~l~~vr~~~~~PV~vG 220 (251)
+...|+.+|. ++.+.-|.+-. + +.....+.++..+.++++.+ +...+ .+.+.++++++.+++||+.|
T Consensus 189 v~avReavG~-d~~l~vDaN~~----~--~~~~A~~~~~~l~~~~i~~i-----EeP~~~~d~~~~~~l~~~~~iPIa~d 256 (388)
T 3tcs_A 189 IPTMRRELGD-DVDLLIDANSC----Y--TPDRAIEVGHMLQDHGFCHF-----EEPCPYWELAQTKQVTDALDIDVTGG 256 (388)
T ss_dssp HHHHHHHHCS-SSEEEEECTTC----C--CHHHHHHHHHHHHHTTCCEE-----ECCSCTTCHHHHHHHHHHCSSCEEEC
T ss_pred HHHHHHHhCC-CCeEEEeCCCC----c--CHHHHHHHHHHHhhcCCeEE-----ECCCCccCHHHHHHHHHhcCCCEEcC
Confidence 4567778874 67776554422 1 11222233343344566654 11222 25788999999999999999
Q ss_pred cCC-ChHhHHHhhc---CCEEEE
Q psy9039 221 SGV-TSDNVEHYMT---ADALII 239 (251)
Q Consensus 221 ~GI-~~~~v~~~~~---ADGvIV 239 (251)
--+ +..++++++. +|.+.+
T Consensus 257 E~~~~~~~~~~~i~~~a~d~v~~ 279 (388)
T 3tcs_A 257 EQDCDLPTWQRMIDMRAVDIVQP 279 (388)
T ss_dssp TTCCCHHHHHHHHHHTCCSEECC
T ss_pred CccCCHHHHHHHHHcCCCCEEEe
Confidence 988 6888888873 887754
No 462
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=56.54 E-value=33 Score=28.89 Aligned_cols=64 Identities=20% Similarity=0.113 Sum_probs=45.8
Q ss_pred ccHHHHHHHhhhccccEEEecCCCCCCCCCHHHHHHHHhcCCCCEEEecC-C-ChHhHHHhhc--CCEEEEe
Q psy9039 173 VDITETAKAASFFLSDGLIITGNATGDPADVSQLMSVKNAVDLPILIGSG-V-TSDNVEHYMT--ADALIIG 240 (251)
Q Consensus 173 ~~i~~~a~~a~~~~~D~v~VTG~~~g~~~~~~~l~~vr~~~~~PV~vG~G-I-~~~~v~~~~~--ADGvIVG 240 (251)
+...++++.+...|+..+-+|=.. +...+.++++|+..+-. ++|-| + +.++++.+.. ||.++.+
T Consensus 46 ~~a~~~a~al~~gGi~~iEvt~~t---~~a~e~I~~l~~~~~~~-~iGaGTVlt~~~a~~Ai~AGA~fIvsP 113 (232)
T 4e38_A 46 EDIIPLGKVLAENGLPAAEITFRS---DAAVEAIRLLRQAQPEM-LIGAGTILNGEQALAAKEAGATFVVSP 113 (232)
T ss_dssp GGHHHHHHHHHHTTCCEEEEETTS---TTHHHHHHHHHHHCTTC-EEEEECCCSHHHHHHHHHHTCSEEECS
T ss_pred HHHHHHHHHHHHCCCCEEEEeCCC---CCHHHHHHHHHHhCCCC-EEeECCcCCHHHHHHHHHcCCCEEEeC
Confidence 456667777767799999997553 22367888898876443 44544 4 7999999986 9988754
No 463
>3uhf_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich fold, isomerase; HET: DGL; 1.83A {Campylobacter jejuni} PDB: 3uho_A* 3uhp_A
Probab=56.28 E-value=12 Score=32.32 Aligned_cols=27 Identities=7% Similarity=-0.020 Sum_probs=24.6
Q ss_pred chHHHHHHHHHhhCCCCcCCCCccEEEE
Q psy9039 29 ANMTRLCAEIRKVLPPSVPVGVQHGVIV 56 (251)
Q Consensus 29 ~~~~~i~~~a~~~a~~l~~~Gv~D~i~i 56 (251)
.+.++|.+.+.+.++.|++.|+ |.|.|
T Consensus 66 ks~e~i~~~~~~~~~~L~~~g~-d~IVI 92 (274)
T 3uhf_A 66 KDKDTIIKFCLEALDFFEQFQI-DMLII 92 (274)
T ss_dssp SCHHHHHHHHHHHHHHHTTSCC-SEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHCCC-CEEEE
Confidence 6888999999999999999999 99986
No 464
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=56.19 E-value=13 Score=32.96 Aligned_cols=39 Identities=13% Similarity=0.284 Sum_probs=33.9
Q ss_pred CHHHHHHHHhcCCCCEEEecCC-ChHhHHHhhc---CCEEEEe
Q psy9039 202 DVSQLMSVKNAVDLPILIGSGV-TSDNVEHYMT---ADALIIG 240 (251)
Q Consensus 202 ~~~~l~~vr~~~~~PV~vG~GI-~~~~v~~~~~---ADGvIVG 240 (251)
+.+.++++|+.+++||+.+..+ +++++.++++ +|.+.+-
T Consensus 227 ~~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik 269 (371)
T 2ps2_A 227 TWRECISLRRKTDIPIIYDELATNEMSIVKILADDAAEGIDLK 269 (371)
T ss_dssp SHHHHHHHHTTCCSCEEESTTCCSHHHHHHHHHHTCCSEEEEE
T ss_pred CHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhCCCCEEEec
Confidence 6788999999999999999999 6899998874 8998763
No 465
>4dxk_A Mandelate racemase / muconate lactonizing enzyme protein; enolase, mandelate racemase subgroup, enzyme function initia EFI; 1.25A {Agrobacterium tumefaciens} PDB: 4dx3_A 2pod_A
Probab=56.05 E-value=14 Score=33.40 Aligned_cols=90 Identities=13% Similarity=0.118 Sum_probs=54.8
Q ss_pred cchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCCCCCCCCHHHHHHHHhcCCCCEE
Q psy9039 139 AGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNATGDPADVSQLMSVKNAVDLPIL 218 (251)
Q Consensus 139 a~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~g~~~~~~~l~~vr~~~~~PV~ 218 (251)
.+.+...|+.+|. ++.+.-|.+-. + +.....+.++..+.++++.+-- .-.+.+.+.++++|+.+++||+
T Consensus 197 ~~~v~avR~a~g~-~~~l~vDaN~~----~--~~~~A~~~~~~L~~~~i~~iEe----P~~~~~~~~~~~l~~~~~iPIa 265 (400)
T 4dxk_A 197 LEPFEKIRKAVGD-KMDIMVEFHSM----W--QLLPAMQIAKALTPYQTFWHED----PIKMDSLSSLTRYAAVSPAPIS 265 (400)
T ss_dssp HHHHHHHHHHHGG-GSEEEEECTTC----B--CHHHHHHHHHHTGGGCCSEEEC----CBCTTSGGGHHHHHHHCSSCEE
T ss_pred HHHHHHHHHHcCC-CceEEEECCCC----C--CHHHHHHHHHHHhhcCCCEEEc----CCCcccHHHHHHHHHhCCCCEE
Confidence 3445567777773 66665454411 1 1112222333333467776531 1112246778899999999999
Q ss_pred EecCC-ChHhHHHhhc---CCEEEE
Q psy9039 219 IGSGV-TSDNVEHYMT---ADALII 239 (251)
Q Consensus 219 vG~GI-~~~~v~~~~~---ADGvIV 239 (251)
.+--+ +++++.++++ +|.+.+
T Consensus 266 ~dE~~~~~~~~~~~l~~~a~d~v~~ 290 (400)
T 4dxk_A 266 ASETLGSRWAFRDLLETGAAGVVML 290 (400)
T ss_dssp ECTTCCHHHHHHHHHHTTCCCEEEE
T ss_pred ecCCcCCHHHHHHHHHcCCCCEEEe
Confidence 99999 5788988874 888875
No 466
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=55.98 E-value=3.8 Score=36.30 Aligned_cols=49 Identities=14% Similarity=0.157 Sum_probs=31.5
Q ss_pred HHHHHhhCCCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeC
Q psy9039 35 CAEIRKVLPPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQILSG 102 (251)
Q Consensus 35 ~~~a~~~a~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N 102 (251)
++.+++.+++++++|+ |+|.++ +. ...+-+.++.+++. + +|+-+|+...
T Consensus 177 ldeAi~Ra~ay~eAGA-D~ifi~---~~----------~~~~~~~~i~~~~~---~--~Pv~~n~~~~ 225 (307)
T 3lye_A 177 YEECIERLRAARDEGA-DVGLLE---GF----------RSKEQAAAAVAALA---P--WPLLLNSVEN 225 (307)
T ss_dssp HHHHHHHHHHHHHTTC-SEEEEC---CC----------SCHHHHHHHHHHHT---T--SCBEEEEETT
T ss_pred HHHHHHHHHHHHHCCC-CEEEec---CC----------CCHHHHHHHHHHcc---C--CceeEEeecC
Confidence 5678888899999999 999762 22 11122444444443 4 5888887653
No 467
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=55.74 E-value=1.1e+02 Score=27.23 Aligned_cols=188 Identities=18% Similarity=0.131 Sum_probs=97.6
Q ss_pred cccccCCCCCCCcchHHHHHHHHHhhCCCCcCCCCccEEEEeecC--CCCccccCCCchHHHHHHHHHHHHHHHhCCCCc
Q psy9039 16 PYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQHGVIVENMH--DVPYVLEAESGPEITANMTRLCAEIRKVLPPSV 93 (251)
Q Consensus 16 p~~~~~pG~P~~~~~~~~i~~~a~~~a~~l~~~Gv~D~i~ieN~~--~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~ 93 (251)
+|+-+-||+ ..|.+...+.+ +.+.++|+ |.+-++-+- -.||+-. |+- ..-.++++++++++. +
T Consensus 107 ~~vIAgpcs---~es~e~a~~~a----~~~k~aGa-~~vr~q~fKprTs~~~f~---glg--~egl~~l~~~~~e~G--l 171 (350)
T 1vr6_A 107 FTIIAGPCS---VEGREMLMETA----HFLSELGV-KVLRGGAYKPRTSPYSFQ---GLG--EKGLEYLREAADKYG--M 171 (350)
T ss_dssp EEEEEECSB---CCCHHHHHHHH----HHHHHTTC-CEEECBSCCCCCSTTSCC---CCT--HHHHHHHHHHHHHHT--C
T ss_pred eEEEEeCCC---cCCHHHHHHHH----HHHHHcCC-CeeeeeEEeCCCChHhhc---CCC--HHHHHHHHHHHHHcC--C
Confidence 777785655 44555444333 45567899 998754322 1233211 211 233456677777778 7
Q ss_pred cEEEEEeeCChHHHHHHHHHcCccceecccccccccCCCceeecCcchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcc
Q psy9039 94 PVGVQILSGCNKAALATAQAAGLDFIRAESFVFGHMADEGLMNAQAGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADV 173 (251)
Q Consensus 94 P~Gvn~~~N~~~~~~~ia~a~g~~Fir~~~~~~~~~~~~Gli~~da~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~ 173 (251)
|+..-.+- ..+....... .+++++.++.- .-..+++...+.+. .|-+ |.|.. .
T Consensus 172 ~~~te~~d---~~~~~~l~~~-vd~lkIgAr~~-----------~n~~LL~~va~~~k-PVil------k~G~~-----~ 224 (350)
T 1vr6_A 172 YVVTEALG---EDDLPKVAEY-ADIIQIGARNA-----------QNFRLLSKAGSYNK-PVLL------KRGFM-----N 224 (350)
T ss_dssp EEEEECSS---GGGHHHHHHH-CSEEEECGGGT-----------TCHHHHHHHHTTCS-CEEE------ECCTT-----C
T ss_pred cEEEEeCC---HHHHHHHHHh-CCEEEECcccc-----------cCHHHHHHHHccCC-cEEE------cCCCC-----C
Confidence 88776653 2334443333 68888643221 12224444444443 2222 33321 2
Q ss_pred cHHHHHHHhh---hccc-cEEEe-cCCCCC-----CCCCHHHHHHHHhcCCCCEEE----ecCCC---hH-hHHHhhc-C
Q psy9039 174 DITETAKAAS---FFLS-DGLII-TGNATG-----DPADVSQLMSVKNAVDLPILI----GSGVT---SD-NVEHYMT-A 234 (251)
Q Consensus 174 ~i~~~a~~a~---~~~~-D~v~V-TG~~~g-----~~~~~~~l~~vr~~~~~PV~v----G~GI~---~~-~v~~~~~-A 234 (251)
++.++..+++ ..|. +.+.. -|.++- ...++..+..+|+.+.+||++ +.|-. .. .++.+.. |
T Consensus 225 tl~ei~~Ave~i~~~GN~~viLceRG~~typ~~~~~~vdl~ai~~lk~~~~lpVi~dssHs~G~~~~v~~~a~AAvA~GA 304 (350)
T 1vr6_A 225 TIEEFLLSAEYIANSGNTKIILCERGIRTFEKATRNTLDISAVPIIRKESHLPILVDPSHSGGRRDLVIPLSRAAIAVGA 304 (350)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEECHHHHHCSGGGHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHCCCCeEEEEeCCCCCCCCcChhhhhHHHHHHHHHhhCCCEEEeCCCCCcccchHHHHHHHHHHhCC
Confidence 4555544444 2454 44433 344332 112456778899988999765 12431 11 2223333 9
Q ss_pred CEEEEeceEee
Q psy9039 235 DALIIGSHFKQ 245 (251)
Q Consensus 235 DGvIVGS~~~~ 245 (251)
||+++=+.|--
T Consensus 305 ~Gl~IE~H~~p 315 (350)
T 1vr6_A 305 HGIIVEVHPEP 315 (350)
T ss_dssp SEEEEEBCSCG
T ss_pred CEEEEEecCCc
Confidence 99999887643
No 468
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=55.65 E-value=23 Score=31.46 Aligned_cols=170 Identities=18% Similarity=0.163 Sum_probs=74.3
Q ss_pred CCCcCCCCccEEEEeecCC-CCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeCChHHHHHH---HHHcCccc
Q psy9039 43 PPSVPVGVQHGVIVENMHD-VPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQILSGCNKAALAT---AQAAGLDF 118 (251)
Q Consensus 43 ~~l~~~Gv~D~i~ieN~~~-~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~~~~~~i---a~a~g~~F 118 (251)
+-|++.|+ |+|.+-=-.| .+.- .-.+..+-+..+++.++. . +|+.+-+-.|....+... |...|++.
T Consensus 59 ~~li~~Gv-~Gl~v~GtTGE~~~L----s~eEr~~vi~~~ve~~~g--r--vpViaGvg~~st~eai~la~~A~~~Gada 129 (343)
T 2v9d_A 59 DDLIKAGV-DGLFFLGSGGEFSQL----GAEERKAIARFAIDHVDR--R--VPVLIGTGGTNARETIELSQHAQQAGADG 129 (343)
T ss_dssp HHHHHTTC-SCEEESSTTTTGGGS----CHHHHHHHHHHHHHHHTT--S--SCEEEECCSSCHHHHHHHHHHHHHHTCSE
T ss_pred HHHHHcCC-CEEEeCccccChhhC----CHHHHHHHHHHHHHHhCC--C--CcEEEecCCCCHHHHHHHHHHHHhcCCCE
Confidence 55678899 9998621111 1211 122333333333333332 2 688877776664444433 33345544
Q ss_pred eecccccccccCCCceeecCcchhHHHHHhcC-CCcchh-hhhhHhhccCCCCCCcccHHHHHHHh-hhccccEEEecCC
Q psy9039 119 IRAESFVFGHMADEGLMNAQAGPLLRYRKQIG-ADNVLV-FTDIKKKHSSHAITADVDITETAKAA-SFFLSDGLIITGN 195 (251)
Q Consensus 119 ir~~~~~~~~~~~~Gli~~da~e~~~~r~~l~-~~~i~i-~a~v~~k~~~~~~~~~~~i~~~a~~a-~~~~~D~v~VTG~ 195 (251)
+-.- ..-...+..+++.++.+.+- .-++.+ ++++-...|..+ +.+.+.+.+ +.-. |.|-
T Consensus 130 vlv~--------~P~Y~~~s~~~l~~~f~~VA~a~~lPiilYn~P~~tg~~l-----~~e~~~~La~~~pn-----Ivgi 191 (343)
T 2v9d_A 130 IVVI--------NPYYWKVSEANLIRYFEQVADSVTLPVMLYNFPALTGQDL-----TPALVKTLADSRSN-----IIGI 191 (343)
T ss_dssp EEEE--------CCSSSCCCHHHHHHHHHHHHHTCSSCEEEEECHHHHSSCC-----CHHHHHHHHHHCTT-----EEEE
T ss_pred EEEC--------CCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCchhcCcCC-----CHHHHHHHHHhCCC-----EEEE
Confidence 3321 11112234455665555432 112233 333332334432 333333333 2211 1222
Q ss_pred CCCCCCCHHHHHHHHhc-----CCCCEEEecCCChHhHHHhhc-CCEEEEece
Q psy9039 196 ATGDPADVSQLMSVKNA-----VDLPILIGSGVTSDNVEHYMT-ADALIIGSH 242 (251)
Q Consensus 196 ~~g~~~~~~~l~~vr~~-----~~~PV~vG~GI~~~~v~~~~~-ADGvIVGS~ 242 (251)
+. ...++..+.++++. .+.-|+.|.. .--+..+.. ++|+|-|++
T Consensus 192 Kd-ssgd~~~~~~l~~~~~~~~~~f~v~~G~D--~~~l~~l~~Ga~G~is~~a 241 (343)
T 2v9d_A 192 KD-TIDSVAHLRSMIHTVKGAHPHFTVLCGYD--DHLFNTLLLGGDGAISASG 241 (343)
T ss_dssp EE-CCSCHHHHHHHHHHHHHHCTTCEEEESSG--GGHHHHHHTTCCEECCGGG
T ss_pred Ee-CCCCHHHHHHHHHhcCCCCCCEEEEECcH--HHHHHHHHCCCCEEEeCHH
Confidence 21 11245555555443 2455655532 222333344 999998864
No 469
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=55.55 E-value=13 Score=33.74 Aligned_cols=90 Identities=10% Similarity=0.052 Sum_probs=56.1
Q ss_pred CcchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCCCCCC-CCHHHHHHHHhcCCCC
Q psy9039 138 QAGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNATGDP-ADVSQLMSVKNAVDLP 216 (251)
Q Consensus 138 da~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~g~~-~~~~~l~~vr~~~~~P 216 (251)
|.+.+...|+.+|. ++.+.-|.+-. + +.....+.++..+.++++.+- ...+ .+.+.++++++.+++|
T Consensus 177 d~~~v~avR~a~g~-~~~l~vDaN~~----~--~~~~A~~~~~~L~~~~i~~iE-----qP~~~~d~~~~~~l~~~~~iP 244 (393)
T 4dwd_A 177 DIAKARAVRELLGP-DAVIGFDANNG----Y--SVGGAIRVGRALEDLGYSWFE-----EPVQHYHVGAMGEVAQRLDIT 244 (393)
T ss_dssp HHHHHHHHHHHHCT-TCCEEEECTTC----C--CHHHHHHHHHHHHHTTCSEEE-----CCSCTTCHHHHHHHHHHCSSE
T ss_pred HHHHHHHHHHHhCC-CCeEEEECCCC----C--CHHHHHHHHHHHHhhCCCEEE-----CCCCcccHHHHHHHHhhCCCC
Confidence 44555667777774 66665554311 1 112222333333446777652 1122 2578899999999999
Q ss_pred EEEecCC-ChHhHHHhhc--CCEEEE
Q psy9039 217 ILIGSGV-TSDNVEHYMT--ADALII 239 (251)
Q Consensus 217 V~vG~GI-~~~~v~~~~~--ADGvIV 239 (251)
|+.+--+ +++++.+++. +|.+.+
T Consensus 245 Ia~dE~~~~~~~~~~~i~~~~d~v~~ 270 (393)
T 4dwd_A 245 VSAGEQTYTLQALKDLILSGVRMVQP 270 (393)
T ss_dssp EEBCTTCCSHHHHHHHHHHTCCEECC
T ss_pred EEecCCcCCHHHHHHHHHcCCCEEEe
Confidence 9999999 6888888874 777654
No 470
>3t6c_A RSPA, putative MAND family dehydratase; enolase, mannonate dehydratase related protein, enzyme funct intitiative, lyase, hydro-lyases; HET: GCO; 1.60A {Pantoea ananatis} PDB: 3tw9_A 3twa_A 3twb_A*
Probab=55.50 E-value=11 Score=34.74 Aligned_cols=87 Identities=15% Similarity=0.163 Sum_probs=54.7
Q ss_pred hhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCCCCCCC-CHHHHHHHHhcCCCCEEE
Q psy9039 141 PLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNATGDPA-DVSQLMSVKNAVDLPILI 219 (251)
Q Consensus 141 e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~g~~~-~~~~l~~vr~~~~~PV~v 219 (251)
.+...|+.+|. ++.+.-|.+-. + +.....+.++..+.++++.+- ...++ +.+.++++++.+++||++
T Consensus 229 ~v~avR~a~G~-d~~L~vDaN~~----~--~~~~A~~~~~~L~~~~i~~iE-----eP~~~~d~~~~~~l~~~~~iPIa~ 296 (440)
T 3t6c_A 229 LFDHLRNKLGF-SVELLHDAHER----I--TPINAIHMAKALEPYQLFFLE-----DPVAPENTEWLKMLRQQSSTPIAM 296 (440)
T ss_dssp HHHHHHHHHCS-SSEEEEECTTC----S--CHHHHHHHHHHTGGGCCSEEE-----CSSCGGGGGGHHHHHHHCCSCEEE
T ss_pred HHHHHHHhcCC-CCeEEEECCCC----C--CHHHHHHHHHHhhhcCCCEEE-----CCCChhhHHHHHHHHhhcCCCEEe
Confidence 35567788874 66776554421 1 112222333443446777652 11222 456788999999999999
Q ss_pred ecCC-ChHhHHHhhc---CCEEEE
Q psy9039 220 GSGV-TSDNVEHYMT---ADALII 239 (251)
Q Consensus 220 G~GI-~~~~v~~~~~---ADGvIV 239 (251)
+--+ +.+++.+++. +|.+.+
T Consensus 297 dE~~~~~~~~~~~i~~~a~d~v~~ 320 (440)
T 3t6c_A 297 GELFVNVNEWKPLIDNKLIDYIRC 320 (440)
T ss_dssp CTTCCSHHHHHHHHHTTCCSEECC
T ss_pred CcccCCHHHHHHHHHcCCccceee
Confidence 9999 6899998883 888765
No 471
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=55.49 E-value=18 Score=30.56 Aligned_cols=69 Identities=10% Similarity=0.229 Sum_probs=44.8
Q ss_pred HHhhhccccEEEecCC--CCCCCCCHHHHHHHH---hcCCCCEEE-----ecCC--ChHhHH-------Hhhc--CCEEE
Q psy9039 180 KAASFFLSDGLIITGN--ATGDPADVSQLMSVK---NAVDLPILI-----GSGV--TSDNVE-------HYMT--ADALI 238 (251)
Q Consensus 180 ~~a~~~~~D~v~VTG~--~~g~~~~~~~l~~vr---~~~~~PV~v-----G~GI--~~~~v~-------~~~~--ADGvI 238 (251)
..|...|+|.+-.-.. .-|..|+...++.+| +.+++||.+ |++- |.+.+. .+.+ +||++
T Consensus 15 ~~A~~~GAdRIELc~~L~~GGlTPS~g~i~~~~~~~~~~~ipV~vMIRPR~GdF~Ys~~E~~~M~~Di~~~~~~GadGvV 94 (224)
T 2bdq_A 15 TRLDKAIISRVELCDNLAVGGTTPSYGVIKEANQYLHEKGISVAVMIRPRGGNFVYNDLELRIMEEDILRAVELESDALV 94 (224)
T ss_dssp GGCCTTTCCEEEEEBCGGGTCBCCCHHHHHHHHHHHHHTTCEEEEECCSSSSCSCCCHHHHHHHHHHHHHHHHTTCSEEE
T ss_pred HHHHHcCCCEEEEcCCcccCCcCCCHHHHHHHHHhhhhcCCceEEEECCCCCCCcCCHHHHHHHHHHHHHHHHcCCCEEE
Confidence 4455568888844332 234567788899998 888999876 5554 655444 3333 99999
Q ss_pred EeceEeecCee
Q psy9039 239 IGSHFKQGGRT 249 (251)
Q Consensus 239 VGS~~~~~g~~ 249 (251)
+|- +-.||.+
T Consensus 95 ~G~-Lt~dg~i 104 (224)
T 2bdq_A 95 LGI-LTSNNHI 104 (224)
T ss_dssp ECC-BCTTSSB
T ss_pred Eee-ECCCCCc
Confidence 994 4445543
No 472
>3ldv_A Orotidine 5'-phosphate decarboxylase; structural genomics, infectious diseases; 1.77A {Vibrio cholerae o1 biovar el tor} PDB: 3uwq_A*
Probab=55.26 E-value=9 Score=32.88 Aligned_cols=61 Identities=18% Similarity=0.223 Sum_probs=38.8
Q ss_pred HHHHHHhhhccccEEEecCCCCCCCCCHHHHHHHHhcC-CCCEEEecCCChHh-----------HHHhhc--CCEEEEec
Q psy9039 176 TETAKAASFFLSDGLIITGNATGDPADVSQLMSVKNAV-DLPILIGSGVTSDN-----------VEHYMT--ADALIIGS 241 (251)
Q Consensus 176 ~~~a~~a~~~~~D~v~VTG~~~g~~~~~~~l~~vr~~~-~~PV~vG~GI~~~~-----------v~~~~~--ADGvIVGS 241 (251)
.+.++.+...|+|+++++. ..++++|+.+ +-.+++=-||.++. ..+++. ||-++||+
T Consensus 165 ~~~A~~a~~aG~~GvV~sa---------~e~~~iR~~~g~~fl~VtPGIr~qg~~~~dQ~Rv~t~~~a~~aGad~iVvGr 235 (255)
T 3ldv_A 165 LRLATLTKNAGLDGVVCSA---------QEASLLKQHLGREFKLVTPGIRPAGSEQGDQRRIMTPAQAIASGSDYLVIGR 235 (255)
T ss_dssp HHHHHHHHHTTCSEEECCH---------HHHHHHHHHHCTTSEEEEECCCCTTSTTSSCSSSCCHHHHHHTTCSEEEECH
T ss_pred HHHHHHHHHcCCCEEEECH---------HHHHHHHHhcCCCcEEEeCCcccCcCCccceeccCCHHHHHHcCCCEEEECH
Confidence 3344444456899987763 2466777765 34566766775421 445553 99999999
Q ss_pred eEee
Q psy9039 242 HFKQ 245 (251)
Q Consensus 242 ~~~~ 245 (251)
++-+
T Consensus 236 ~I~~ 239 (255)
T 3ldv_A 236 PITQ 239 (255)
T ss_dssp HHHT
T ss_pred HHhC
Confidence 8754
No 473
>2zc8_A N-acylamino acid racemase; octamer, TIM beta/alpha-barrel, metal-binding, metal binding; 1.95A {Thermus thermophilus}
Probab=55.17 E-value=32 Score=30.39 Aligned_cols=87 Identities=9% Similarity=0.084 Sum_probs=56.2
Q ss_pred cchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCCCCC-CCCHHHHHHHHhcCCCCE
Q psy9039 139 AGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNATGD-PADVSQLMSVKNAVDLPI 217 (251)
Q Consensus 139 a~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~g~-~~~~~~l~~vr~~~~~PV 217 (251)
.+.+...|+.+ +++.+.-|.+-. + +. .. .+.++..+.++++.+- ... +.+.+.++++++.+++||
T Consensus 170 ~~~v~avr~a~--~~~~l~vDan~~----~-~~-~~-~~~~~~l~~~~i~~iE-----qP~~~~d~~~~~~l~~~~~ipI 235 (369)
T 2zc8_A 170 YEVLKAVREAF--PEATLTADANSA----Y-SL-AN-LAQLKRLDELRLDYIE-----QPLAYDDLLDHAKLQRELSTPI 235 (369)
T ss_dssp HHHHHHHHHHC--TTSCEEEECTTC----C-CG-GG-HHHHHGGGGGCCSCEE-----CCSCTTCSHHHHHHHHHCSSCE
T ss_pred HHHHHHHHHHc--CCCeEEEecCCC----C-CH-HH-HHHHHHHHhCCCcEEE-----CCCCcccHHHHHHHHhhCCCCE
Confidence 34445556666 466666555321 1 22 23 4455555556676653 111 235678889999999999
Q ss_pred EEecCC-ChHhHHHhhc---CCEEEE
Q psy9039 218 LIGSGV-TSDNVEHYMT---ADALII 239 (251)
Q Consensus 218 ~vG~GI-~~~~v~~~~~---ADGvIV 239 (251)
+.+--+ +++++++++. +|.+.+
T Consensus 236 a~dE~~~~~~~~~~~i~~~~~d~v~i 261 (369)
T 2zc8_A 236 CLDESLTGAEKARKAIELGAGRVFNV 261 (369)
T ss_dssp EESTTCCSHHHHHHHHHHTCCSEEEE
T ss_pred EEcCccCCHHHHHHHHHhCCCCEEEE
Confidence 999999 6889998883 898876
No 474
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=55.14 E-value=18 Score=33.81 Aligned_cols=66 Identities=18% Similarity=0.283 Sum_probs=47.5
Q ss_pred CCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeCCh--HHHHHHHHHcCcccee
Q psy9039 43 PPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQILSGCN--KAALATAQAAGLDFIR 120 (251)
Q Consensus 43 ~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~--~~~~~ia~a~g~~Fir 120 (251)
+.+.+.|+ |.|-|....|. .+...+.++++++|+.++ +|+++-+--+.. .+..-.|...|++.+.
T Consensus 165 ~~l~~~Ga-d~I~l~DT~G~----------~~P~~v~~lv~~l~~~~~--~~i~~H~Hnd~GlAvAN~laAv~AGa~~VD 231 (464)
T 2nx9_A 165 QQLAELGV-DSIALKDMAGI----------LTPYAAEELVSTLKKQVD--VELHLHCHSTAGLADMTLLKAIEAGVDRVD 231 (464)
T ss_dssp HHHHHTTC-SEEEEEETTSC----------CCHHHHHHHHHHHHHHCC--SCEEEEECCTTSCHHHHHHHHHHTTCSEEE
T ss_pred HHHHHCCC-CEEEEcCCCCC----------cCHHHHHHHHHHHHHhcC--CeEEEEECCCCChHHHHHHHHHHhCCCEEE
Confidence 45678899 99977655544 344558889999999887 799999875442 4445556668888887
Q ss_pred c
Q psy9039 121 A 121 (251)
Q Consensus 121 ~ 121 (251)
.
T Consensus 232 ~ 232 (464)
T 2nx9_A 232 T 232 (464)
T ss_dssp E
T ss_pred E
Confidence 5
No 475
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=54.86 E-value=13 Score=32.51 Aligned_cols=57 Identities=23% Similarity=0.355 Sum_probs=38.9
Q ss_pred HHHhhhccccEEEecCCCCCCC--C-CH-HHHHHHHhcCCCCEEE------ecCCChHhHHHhhc-CCEEEEeceE
Q psy9039 179 AKAASFFLSDGLIITGNATGDP--A-DV-SQLMSVKNAVDLPILI------GSGVTSDNVEHYMT-ADALIIGSHF 243 (251)
Q Consensus 179 a~~a~~~~~D~v~VTG~~~g~~--~-~~-~~l~~vr~~~~~PV~v------G~GI~~~~v~~~~~-ADGvIVGS~~ 243 (251)
++.+...|.|++.|. .++.. . .+ +.++++|+.+++||++ |.. . .+.. ||++.+=|-|
T Consensus 59 ~~~~~~sGtDai~VG--S~~vt~~~~~~~~~v~~ik~~~~lPvil~fPP~~g~~---~---~i~~~aDa~l~psvl 126 (286)
T 3vk5_A 59 AAELTRLGFAAVLLA--STDYESFESHMEPYVAAVKAATPLPVVLHFPPRPGAG---F---PVVRGADALLLPALL 126 (286)
T ss_dssp HHHHHHTTCSCEEEE--CSCCSSHHHHHHHHHHHHHHHCSSCEEEECCCBTTTB---S---CCCTTCSEEEEEEET
T ss_pred HHHHHhcCCCEEEEc--cCCCCcchHHHHHHHHHHHHhCCCCEEEECCCCCCCc---c---ccccCCCEEEEEEEe
Confidence 344445799999887 45554 2 23 6788999989999999 433 2 2234 8988876654
No 476
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=54.43 E-value=4.7 Score=35.55 Aligned_cols=49 Identities=10% Similarity=0.082 Sum_probs=32.5
Q ss_pred HHHHHHHhhCCCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEee
Q psy9039 33 RLCAEIRKVLPPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQILS 101 (251)
Q Consensus 33 ~i~~~a~~~a~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~ 101 (251)
.=++.+++.++++.++|+ |+|.+| +. + . ...++++.+.++ +|+-+|+..
T Consensus 168 ~gldeai~Ra~ay~~AGA-D~if~~---~~----~------~----~ee~~~~~~~~~--~Pl~~n~~~ 216 (298)
T 3eoo_A 168 EGIDAAIERAIAYVEAGA-DMIFPE---AM----K------T----LDDYRRFKEAVK--VPILANLTE 216 (298)
T ss_dssp HHHHHHHHHHHHHHHTTC-SEEEEC---CC----C------S----HHHHHHHHHHHC--SCBEEECCT
T ss_pred cCHHHHHHHHHhhHhcCC-CEEEeC---CC----C------C----HHHHHHHHHHcC--CCeEEEecc
Confidence 346778888999999999 999762 11 1 1 233445555556 698888753
No 477
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=54.04 E-value=59 Score=30.19 Aligned_cols=167 Identities=14% Similarity=0.140 Sum_probs=85.9
Q ss_pred CCCcCCCCccEEEEeecCCCC--------ccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEe-eCC------h---
Q psy9039 43 PPSVPVGVQHGVIVENMHDVP--------YVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQIL-SGC------N--- 104 (251)
Q Consensus 43 ~~l~~~Gv~D~i~ieN~~~~P--------f~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~-~N~------~--- 104 (251)
+.|.+.|+ +.|++ +.| |..+ + -...++++++..+. .++...+- .|. +
T Consensus 37 ~~L~~~Gv-~~IE~----g~~atF~~~~r~~~~---d------~~e~l~~i~~~~~~-~~l~~l~R~~N~~G~~~~~ddv 101 (464)
T 2nx9_A 37 QQLDQIGY-WSLEC----WGGATFDSCIRFLGE---D------PWQRLRLLKQAMPN-TPLQMLLRGQNLLGYRHYADDV 101 (464)
T ss_dssp HHHHTSCC-SEEEE----EETTHHHHHHHTTCC---C------HHHHHHHHHHHCSS-SCEEEEECGGGTTSSSCCCHHH
T ss_pred HHHHHcCC-CEEEe----CcCccccchhhccCC---C------HHHHHHHHHHhCCC-CeEEEEeccccccCcccccchh
Confidence 55788899 99986 333 1122 1 12345556655443 35555432 121 0
Q ss_pred -HHHHHHHHHcCccceecccccccccCCCceeecCcchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhh
Q psy9039 105 -KAALATAQAAGLDFIRAESFVFGHMADEGLMNAQAGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAAS 183 (251)
Q Consensus 105 -~~~~~ia~a~g~~Fir~~~~~~~~~~~~Gli~~da~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~ 183 (251)
...+..+...|.+-+|+. ..+.+- ....+..++.++.|. .+. .++....+.+ .+.....+.++.+.
T Consensus 102 ~~~~v~~a~~~Gvd~i~if----~~~sd~----~ni~~~i~~ak~~G~-~v~--~~i~~~~~~~--~~~e~~~~~a~~l~ 168 (464)
T 2nx9_A 102 VDTFVERAVKNGMDVFRVF----DAMNDV----RNMQQALQAVKKMGA-HAQ--GTLCYTTSPV--HNLQTWVDVAQQLA 168 (464)
T ss_dssp HHHHHHHHHHTTCCEEEEC----CTTCCT----HHHHHHHHHHHHTTC-EEE--EEEECCCCTT--CCHHHHHHHHHHHH
T ss_pred hHHHHHHHHhCCcCEEEEE----EecCHH----HHHHHHHHHHHHCCC-EEE--EEEEeeeCCC--CCHHHHHHHHHHHH
Confidence 122455666778877752 111111 234566777777775 222 1222121212 12334455555555
Q ss_pred hccccEEEecCCCCCCCC-CH-HHHHHHHhcCCCCEEEe----cCCChHhHHHhh-c-CCEE
Q psy9039 184 FFLSDGLIITGNATGDPA-DV-SQLMSVKNAVDLPILIG----SGVTSDNVEHYM-T-ADAL 237 (251)
Q Consensus 184 ~~~~D~v~VTG~~~g~~~-~~-~~l~~vr~~~~~PV~vG----~GI~~~~v~~~~-~-ADGv 237 (251)
..|+|.+++-=+.-...| .. ++++.+|+.+++|+-+= +|....|.-..+ . ||.+
T Consensus 169 ~~Gad~I~l~DT~G~~~P~~v~~lv~~l~~~~~~~i~~H~Hnd~GlAvAN~laAv~AGa~~V 230 (464)
T 2nx9_A 169 ELGVDSIALKDMAGILTPYAAEELVSTLKKQVDVELHLHCHSTAGLADMTLLKAIEAGVDRV 230 (464)
T ss_dssp HTTCSEEEEEETTSCCCHHHHHHHHHHHHHHCCSCEEEEECCTTSCHHHHHHHHHHTTCSEE
T ss_pred HCCCCEEEEcCCCCCcCHHHHHHHHHHHHHhcCCeEEEEECCCCChHHHHHHHHHHhCCCEE
Confidence 679999888433211222 33 67888988888776554 555444543333 3 7644
No 478
>4gbu_A NADPH dehydrogenase 1; alpha/beta barrel, enenone reductase, alkene reductase, NADP oxidoreductase, carvone, enenatioselectivity; HET: 0WV 1PE FMN; 1.18A {Saccharomyces pastorianus} PDB: 4ge8_A* 1oya_A* 1oyb_A* 1oyc_A* 3tx9_A* 3rnd_A* 1k02_A* 1k03_A* 1bwk_A* 1bwl_A*
Probab=53.85 E-value=3.4 Score=37.68 Aligned_cols=42 Identities=12% Similarity=0.057 Sum_probs=31.5
Q ss_pred HHHHhcCCCCEEEecCC-ChHhHH-Hhhc--CCEEEEeceEeecCe
Q psy9039 207 MSVKNAVDLPILIGSGV-TSDNVE-HYMT--ADALIIGSHFKQGGR 248 (251)
Q Consensus 207 ~~vr~~~~~PV~vG~GI-~~~~v~-~~~~--ADGvIVGS~~~~~g~ 248 (251)
+.+|+.+++||++.||+ +.+++. .+++ ||.|-+|-.|+.|-+
T Consensus 311 ~~ir~~~~~pvi~~G~~~~~~~~~~~~~~~~aDlV~~gR~~iadPd 356 (400)
T 4gbu_A 311 DFVYSIWKGPVIRAGNFALHPEVVREEVKDKRTLIGYGRFFISNPD 356 (400)
T ss_dssp THHHHHCCSCEEEESSCTTCHHHHHHHTTSTTEEEECCHHHHHCTT
T ss_pred HHHHHHhCCCEEEeCCCCChHHHHHHHHcCCCeEhHHHHHHHHCcH
Confidence 35777889999999999 455554 4444 999999988876643
No 479
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=53.09 E-value=26 Score=29.45 Aligned_cols=87 Identities=14% Similarity=0.080 Sum_probs=48.2
Q ss_pred cchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEe-cCCC----------CCCCCCHHHHH
Q psy9039 139 AGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLII-TGNA----------TGDPADVSQLM 207 (251)
Q Consensus 139 a~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~V-TG~~----------~g~~~~~~~l~ 207 (251)
..++.+.++..+...+|++= +.+.. + ++.+....+.+...|+|.+=+ ||.. ++. .+.+.++
T Consensus 101 ~~ei~~v~~a~~~~~lKvIl----Et~~L--t-~eei~~a~~ia~eaGADfVKTSTGf~~~~~~~~~~~~~g-At~~dv~ 172 (226)
T 1vcv_A 101 RRDLISVVGAAGGRVVKVIT----EEPYL--R-DEERYTLYDIIAEAGAHFIKSSTGFAEEAYAARQGNPVH-STPERAA 172 (226)
T ss_dssp HHHHHHHHHHTTTSEEEEEC----CGGGC--C-HHHHHHHHHHHHHHTCSEEECCCSCCCHHHHHHTTCCSS-CCHHHHH
T ss_pred HHHHHHHHHHHcCCCceEEE----eccCC--C-HHHHHHHHHHHHHcCCCEEEeCCCCCccccccccCCCCC-CCHHHHH
Confidence 34555566655433556331 11111 2 223333334444579999855 4654 332 3444444
Q ss_pred HHHhc---C--CCCEEEecCC-ChHhHHHhhc
Q psy9039 208 SVKNA---V--DLPILIGSGV-TSDNVEHYMT 233 (251)
Q Consensus 208 ~vr~~---~--~~PV~vG~GI-~~~~v~~~~~ 233 (251)
.+|+. + ++||-+.||| |.+++.+++.
T Consensus 173 lm~~~i~~~g~~v~vKaaGGirt~~~al~~i~ 204 (226)
T 1vcv_A 173 AIARYIKEKGYRLGVKMAGGIRTREQAKAIVD 204 (226)
T ss_dssp HHHHHHHHHTCCCEEEEESSCCSHHHHHHHHH
T ss_pred HHHHHHHHhCCCceEEEeCCCCCHHHHHHHHH
Confidence 44444 4 4999999999 6888887775
No 480
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*
Probab=52.92 E-value=14 Score=31.15 Aligned_cols=43 Identities=5% Similarity=0.008 Sum_probs=23.5
Q ss_pred CcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEE
Q psy9039 45 SVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQ 98 (251)
Q Consensus 45 l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn 98 (251)
+.+.|+ |.||+ -.|. |.++ . .......++.+|+...+ .|+.+-
T Consensus 26 ~~~~~~-D~vEl--RvD~-l~~~---~---~~~v~~~~~~lr~~~~~-~PiI~T 68 (238)
T 1sfl_A 26 HRIDAI-DVLEL--RIDQ-FENV---T---VDQVAEMITKLKVMQDS-FKLLVT 68 (238)
T ss_dssp HTTTTC-SEEEE--ECTT-STTC---C---HHHHHHHHHHHC---CC-SEEEEE
T ss_pred hhhcCC-CEEEE--Eecc-cccC---C---HHHHHHHHHHHHHhccC-CCEEEE
Confidence 456699 99976 3332 2222 1 34566777888877632 587554
No 481
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=52.79 E-value=38 Score=29.07 Aligned_cols=57 Identities=12% Similarity=0.106 Sum_probs=35.7
Q ss_pred hccccEEEecCCCCCCCC--CH----HHHHHHHhcCCCCEEEecCC-ChHh-HH---Hhhc--CCEEEEece
Q psy9039 184 FFLSDGLIITGNATGDPA--DV----SQLMSVKNAVDLPILIGSGV-TSDN-VE---HYMT--ADALIIGSH 242 (251)
Q Consensus 184 ~~~~D~v~VTG~~~g~~~--~~----~~l~~vr~~~~~PV~vG~GI-~~~~-v~---~~~~--ADGvIVGS~ 242 (251)
..|+|++++.|+. |+.. +. +.++.+++.++- |++|-|- +.++ ++ .+.+ |||+.+-+-
T Consensus 30 ~~Gv~gl~v~Gtt-GE~~~Ls~~Er~~v~~~~~~~~~g-vi~Gvg~~~t~~ai~la~~A~~~Gadavlv~~P 99 (286)
T 2r91_A 30 SKGVDVVFVAGTT-GLGPALSLQEKMELTDAATSAARR-VIVQVASLNADEAIALAKYAESRGAEAVASLPP 99 (286)
T ss_dssp HTTCCEEEETSTT-TTGGGSCHHHHHHHHHHHHHHCSS-EEEECCCSSHHHHHHHHHHHHHTTCSEEEECCS
T ss_pred HCCCCEEEECccc-cChhhCCHHHHHHHHHHHHHHhCC-EEEeeCCCCHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 3699999998874 5432 22 335556666544 9999998 4433 33 2222 999988653
No 482
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=52.78 E-value=7 Score=34.22 Aligned_cols=41 Identities=15% Similarity=0.135 Sum_probs=30.0
Q ss_pred HHHHhhCCCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEE
Q psy9039 36 AEIRKVLPPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVG 96 (251)
Q Consensus 36 ~~a~~~a~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~G 96 (251)
+.+++++++++++|+ |+|.+| ++| ....++++.+.++ +|+-
T Consensus 168 ~~ai~Ra~ay~eAGA-d~i~~e---~~~--------------~~~~~~~i~~~~~--~P~i 208 (287)
T 3b8i_A 168 DAVIQRTLAYQEAGA-DGICLV---GVR--------------DFAHLEAIAEHLH--IPLM 208 (287)
T ss_dssp HHHHHHHHHHHHTTC-SEEEEE---CCC--------------SHHHHHHHHTTCC--SCEE
T ss_pred HHHHHHHHHHHHcCC-CEEEec---CCC--------------CHHHHHHHHHhCC--CCEE
Confidence 667888899999999 999875 221 1245567777777 7977
No 483
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=52.60 E-value=43 Score=28.84 Aligned_cols=57 Identities=16% Similarity=0.112 Sum_probs=35.6
Q ss_pred hccccEEEecCCCCCCCC--CH----HHHHHHHhcCCCCEEEecCC-Ch-HhHH---Hhhc--CCEEEEece
Q psy9039 184 FFLSDGLIITGNATGDPA--DV----SQLMSVKNAVDLPILIGSGV-TS-DNVE---HYMT--ADALIIGSH 242 (251)
Q Consensus 184 ~~~~D~v~VTG~~~g~~~--~~----~~l~~vr~~~~~PV~vG~GI-~~-~~v~---~~~~--ADGvIVGS~ 242 (251)
..|+|++++.|+. |+.. +. +.++.+++.++- |++|-|- +. +.++ .+.+ |||+.+-+-
T Consensus 31 ~~Gv~gl~~~Gtt-GE~~~Ls~eEr~~v~~~~~~~~~g-viaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 100 (293)
T 1w3i_A 31 RKGIDKLFVNGTT-GLGPSLSPEEKLENLKAVYDVTNK-IIFQVGGLNLDDAIRLAKLSKDFDIVGIASYAP 100 (293)
T ss_dssp HTTCCEEEESSTT-TTGGGSCHHHHHHHHHHHHTTCSC-EEEECCCSCHHHHHHHHHHGGGSCCSEEEEECC
T ss_pred HcCCCEEEECccc-cChhhCCHHHHHHHHHHHHHHcCC-EEEecCCCCHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 3699999998874 5432 22 335555666544 9999988 44 3333 2223 999988653
No 484
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=52.52 E-value=28 Score=31.26 Aligned_cols=91 Identities=9% Similarity=0.122 Sum_probs=56.2
Q ss_pred CcchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhh--ccccEEEecCCCCCCC-CCHHHHHHHHhcCC
Q psy9039 138 QAGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASF--FLSDGLIITGNATGDP-ADVSQLMSVKNAVD 214 (251)
Q Consensus 138 da~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~--~~~D~v~VTG~~~g~~-~~~~~l~~vr~~~~ 214 (251)
|.+.+...|+.+|. ++.+.-|.+-. + +.....+.++..+. ++++.+ - ...+ .+.+.++++++.++
T Consensus 172 d~~~v~avR~a~g~-~~~L~vDaN~~----w--~~~~A~~~~~~l~~~~~~l~~i--E---eP~~~~d~~~~~~l~~~~~ 239 (379)
T 3r0u_A 172 DIQLLKALDNEFSK-NIKFRFDANQG----W--NLAQTKQFIEEINKYSLNVEII--E---QPVKYYDIKAMAEITKFSN 239 (379)
T ss_dssp HHHHHHHHHHHCCT-TSEEEEECTTC----C--CHHHHHHHHHHHHTSCCCEEEE--E---CCSCTTCHHHHHHHHHHCS
T ss_pred HHHHHHHHHHhcCC-CCeEEEeCCCC----c--CHHHHHHHHHHHhhcCCCcEEE--E---CCCCcccHHHHHHHHhcCC
Confidence 45556667777774 56665444311 1 11222233344443 445554 1 1122 35788999999999
Q ss_pred CCEEEecCC-ChHhHHHhhc---CCEEEEe
Q psy9039 215 LPILIGSGV-TSDNVEHYMT---ADALIIG 240 (251)
Q Consensus 215 ~PV~vG~GI-~~~~v~~~~~---ADGvIVG 240 (251)
+||+.+--+ +..++.+++. +|.+.+-
T Consensus 240 iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k 269 (379)
T 3r0u_A 240 IPVVADESVFDAKDAERVIDEQACNMINIK 269 (379)
T ss_dssp SCEEESTTCSSHHHHHHHHHTTCCSEEEEC
T ss_pred CCEEeCCccCCHHHHHHHHHcCCCCEEEEC
Confidence 999999988 6888888884 8888763
No 485
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=52.08 E-value=29 Score=29.75 Aligned_cols=58 Identities=16% Similarity=0.185 Sum_probs=37.0
Q ss_pred HHHHHHHhhhccccEEEe-cCCCCCCCCCHHHHHHHHhc-------CCCCEEEecCC-ChHhHHHhhc
Q psy9039 175 ITETAKAASFFLSDGLII-TGNATGDPADVSQLMSVKNA-------VDLPILIGSGV-TSDNVEHYMT 233 (251)
Q Consensus 175 i~~~a~~a~~~~~D~v~V-TG~~~g~~~~~~~l~~vr~~-------~~~PV~vG~GI-~~~~v~~~~~ 233 (251)
+....+.+...|+|.+=+ ||..++. .+.+.++-+|+. .++||-+.||| |.+++.+++.
T Consensus 152 i~~a~~ia~eaGADfVKTSTGf~~~g-At~e~v~lm~~~I~~~~~g~~v~VKaaGGIrt~~~al~~i~ 218 (260)
T 1p1x_A 152 IRKASEISIKAGADFIKTSTGKVAVN-ATPESARIMMEVIRDMGVEKTVGFKPAGGVRTAEDAQKYLA 218 (260)
T ss_dssp HHHHHHHHHHTTCSEEECCCSCSSCC-CCHHHHHHHHHHHHHHTCTTTCEEECBSSCCSHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCEEEeCCCCCCCC-CCHHHHHHHHHHHHHhcCCCCceEEEeCCCCCHHHHHHHHH
Confidence 334444555679999855 4665432 345543333333 47999999999 6888888775
No 486
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=52.07 E-value=24 Score=30.83 Aligned_cols=57 Identities=21% Similarity=0.220 Sum_probs=36.9
Q ss_pred HHHHHHhhhccccEEEecCCCCCCCCC---HHHHHHHHhcCCCCEEE----ecCCChHhHHHhhc
Q psy9039 176 TETAKAASFFLSDGLIITGNATGDPAD---VSQLMSVKNAVDLPILI----GSGVTSDNVEHYMT 233 (251)
Q Consensus 176 ~~~a~~a~~~~~D~v~VTG~~~g~~~~---~~~l~~vr~~~~~PV~v----G~GI~~~~v~~~~~ 233 (251)
.+.++.|+..|+|++.+.-.--..++. .+..+++-+++++||++ |. ++++.+.++.+
T Consensus 96 i~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~tg~-l~~~~~~~La~ 159 (314)
T 3d0c_A 96 IELGKSAIDSGADCVMIHQPVHPYITDAGAVEYYRNIIEALDAPSIIYFKDAH-LSDDVIKELAP 159 (314)
T ss_dssp HHHHHHHHHTTCSEEEECCCCCSCCCHHHHHHHHHHHHHHSSSCEEEEECCTT-SCTHHHHHHTT
T ss_pred HHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCCCC-cCHHHHHHHHc
Confidence 344555555799998776543322222 24455666778899988 56 78888888764
No 487
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=52.05 E-value=14 Score=33.25 Aligned_cols=90 Identities=16% Similarity=-0.003 Sum_probs=55.6
Q ss_pred cchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhh--ccccEEEecCCCCCC-CCCHHHHHHHHhcC-C
Q psy9039 139 AGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASF--FLSDGLIITGNATGD-PADVSQLMSVKNAV-D 214 (251)
Q Consensus 139 a~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~--~~~D~v~VTG~~~g~-~~~~~~l~~vr~~~-~ 214 (251)
.+-+...|+.+|. ++.+.-|.+- + + +.....+.++..+. ++++.+- ... +.+.+.++++|+.+ +
T Consensus 177 ~e~v~avR~a~G~-~~~l~vDan~--~--~--~~~~a~~~~~~l~~~g~~i~~iE-----qP~~~~~~~~~~~l~~~~~~ 244 (389)
T 2oz8_A 177 LRRLELLKTCVPA-GSKVMIDPNE--A--W--TSKEALTKLVAIREAGHDLLWVE-----DPILRHDHDGLRTLRHAVTW 244 (389)
T ss_dssp HHHHHHHHTTSCT-TCEEEEECTT--C--B--CHHHHHHHHHHHHHTTCCCSEEE-----SCBCTTCHHHHHHHHHHCCS
T ss_pred HHHHHHHHHhhCC-CCeEEEECCC--C--C--CHHHHHHHHHHHHhcCCCceEEe-----CCCCCcCHHHHHHHHhhCCC
Confidence 3444455666764 5666545431 1 1 11222334444444 5555531 112 23578889999999 9
Q ss_pred CCEEEecCCChHhHHHhhc---CCEEEEe
Q psy9039 215 LPILIGSGVTSDNVEHYMT---ADALIIG 240 (251)
Q Consensus 215 ~PV~vG~GI~~~~v~~~~~---ADGvIVG 240 (251)
+||+.+..++++++.+++. +|.+.+.
T Consensus 245 iPIa~dE~~~~~~~~~~i~~~~~d~v~ik 273 (389)
T 2oz8_A 245 TQINSGEYLDLQGKRLLLEAHAADILNVH 273 (389)
T ss_dssp SEEEECTTCCHHHHHHHHHTTCCSEEEEC
T ss_pred CCEEeCCCCCHHHHHHHHHcCCCCEEEEC
Confidence 9999999997788888873 9999986
No 488
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=51.89 E-value=35 Score=27.82 Aligned_cols=64 Identities=19% Similarity=0.151 Sum_probs=43.7
Q ss_pred ccHHHHHHHhhhccccEEEecCCCCCCCCCHHHHHHHHhcCCCCEEEecCC-ChHhHHHhhc--CCEEEEec
Q psy9039 173 VDITETAKAASFFLSDGLIITGNATGDPADVSQLMSVKNAVDLPILIGSGV-TSDNVEHYMT--ADALIIGS 241 (251)
Q Consensus 173 ~~i~~~a~~a~~~~~D~v~VTG~~~g~~~~~~~l~~vr~~~~~PV~vG~GI-~~~~v~~~~~--ADGvIVGS 241 (251)
+...+.++.+...|++.+-+|=.. +...+.++++|+ .++.+-+|. + +.+++...+. ||++..|.
T Consensus 25 ~~~~~~~~~l~~gGv~~iel~~k~---~~~~~~i~~~~~-~~~~~gag~-vl~~d~~~~A~~~GAd~v~~~~ 91 (207)
T 2yw3_A 25 EDLLGLARVLEEEGVGALEITLRT---EKGLEALKALRK-SGLLLGAGT-VRSPKEAEAALEAGAAFLVSPG 91 (207)
T ss_dssp CCHHHHHHHHHHTTCCEEEEECSS---THHHHHHHHHTT-SSCEEEEES-CCSHHHHHHHHHHTCSEEEESS
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCC---hHHHHHHHHHhC-CCCEEEeCe-EeeHHHHHHHHHcCCCEEEcCC
Confidence 455666666666789999887321 223577888888 555555554 3 6888888886 99998763
No 489
>3fcp_A L-Ala-D/L-Glu epimerase, A muconate lactonizing enzyme; structural genomics, nysgrc,target 9450E, PSI-2; 1.80A {Klebsiella pneumoniae subsp}
Probab=51.58 E-value=23 Score=31.77 Aligned_cols=90 Identities=11% Similarity=0.099 Sum_probs=55.6
Q ss_pred CcchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCCCCC-CCCHHHHHHHHhcCCCC
Q psy9039 138 QAGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNATGD-PADVSQLMSVKNAVDLP 216 (251)
Q Consensus 138 da~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~g~-~~~~~~l~~vr~~~~~P 216 (251)
|.+.+...|+.+|. ++.+.-|.+-. + +.....+.++..+.+++..+ +... +.+.+.++++++.+++|
T Consensus 179 d~~~v~avR~a~g~-~~~l~vDaN~~----~--~~~~A~~~~~~l~~~~i~~i-----EeP~~~~d~~~~~~l~~~~~ip 246 (381)
T 3fcp_A 179 DLRHTRAIVEALGD-RASIRVDVNQA----W--DAATGAKGCRELAAMGVDLI-----EQPVSAHDNAALVRLSQQIETA 246 (381)
T ss_dssp HHHHHHHHHHHTCT-TCEEEEECTTC----B--CHHHHHHHHHHHHHTTCSEE-----ECCBCTTCHHHHHHHHHHSSSE
T ss_pred HHHHHHHHHHHcCC-CCeEEEECCCC----C--CHHHHHHHHHHHhhcCccce-----eCCCCcccHHHHHHHHHhCCCC
Confidence 44556667777773 56665454422 1 11122223333333566554 1112 23578899999999999
Q ss_pred EEEecCC-ChHhHHHhhc---CCEEEE
Q psy9039 217 ILIGSGV-TSDNVEHYMT---ADALII 239 (251)
Q Consensus 217 V~vG~GI-~~~~v~~~~~---ADGvIV 239 (251)
|+.+--+ +..++++++. +|.+.+
T Consensus 247 Ia~dE~~~~~~~~~~~~~~~a~d~v~~ 273 (381)
T 3fcp_A 247 ILADEAVATAYDGYQLAQQGFTGAYAL 273 (381)
T ss_dssp EEESTTCCSHHHHHHHHHTTCCSEEEE
T ss_pred EEECCCcCCHHHHHHHHHcCCCCEEEe
Confidence 9999888 6888888883 888876
No 490
>3dgb_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding, isomeras structural genomics, PSI-2; HET: MUC; 1.70A {Pseudomonas fluorescens} PDB: 3ct2_A* 3fj4_A* 1muc_A 1bkh_A 3muc_A 2muc_A 1f9c_A
Probab=51.31 E-value=17 Score=32.63 Aligned_cols=91 Identities=10% Similarity=0.135 Sum_probs=55.6
Q ss_pred CcchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCCCCCC-CCHHHHHHHHhcCCCC
Q psy9039 138 QAGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNATGDP-ADVSQLMSVKNAVDLP 216 (251)
Q Consensus 138 da~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~g~~-~~~~~l~~vr~~~~~P 216 (251)
|.+.+...|+.+| +++.+.-|.+-. + +.....+.++..+.+++..+- ...+ .+.+.++++++.+++|
T Consensus 180 d~~~v~avR~a~g-~~~~l~vDaN~~----~--~~~~A~~~~~~l~~~~i~~iE-----qP~~~~d~~~~~~l~~~~~ip 247 (382)
T 3dgb_A 180 DLAHVIAIKKALG-DSASVRVDVNQA----W--DEAVALRACRILGGNGIDLIE-----QPISRNNRAGMVRLNASSPAP 247 (382)
T ss_dssp HHHHHHHHHHHHG-GGSEEEEECTTC----B--CHHHHHHHHHHHHTTTCCCEE-----CCBCTTCHHHHHHHHHHCSSC
T ss_pred HHHHHHHHHHHcC-CCCeEEEeCCCC----C--CHHHHHHHHHHHhhcCcCeee-----CCCCccCHHHHHHHHHhCCCC
Confidence 4455556777776 356665444321 1 111222233333335665541 1122 3578899999999999
Q ss_pred EEEecCC-ChHhHHHhhc---CCEEEEe
Q psy9039 217 ILIGSGV-TSDNVEHYMT---ADALIIG 240 (251)
Q Consensus 217 V~vG~GI-~~~~v~~~~~---ADGvIVG 240 (251)
|+.+--+ +..++.+++. +|.+.+-
T Consensus 248 Ia~dE~~~~~~~~~~~~~~~~~d~v~~k 275 (382)
T 3dgb_A 248 IMADESIECVEDAFNLAREGAASVFALK 275 (382)
T ss_dssp EEESTTCSSHHHHHHHHHHTCCSEEEEC
T ss_pred EEeCCCcCCHHHHHHHHHcCCCCEEEec
Confidence 9999988 6888988883 8888763
No 491
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=51.31 E-value=37 Score=29.98 Aligned_cols=90 Identities=18% Similarity=0.103 Sum_probs=50.7
Q ss_pred CCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeCChHHHHHHHHHcC-ccceec
Q psy9039 43 PPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQILSGCNKAALATAQAAG-LDFIRA 121 (251)
Q Consensus 43 ~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~~~~~~ia~a~g-~~Fir~ 121 (251)
+.|++.|+ |.|.+.|-.-.| .+...++- .....++++|+.++ +|+..+.-.+++ ....-+...| ++++..
T Consensus 236 ~~L~~~Gv-d~i~vs~g~~~~--~~~~~~~~---~~~~~~~~ik~~~~--iPVi~~GgI~s~-e~a~~~L~~G~aD~V~i 306 (340)
T 3gr7_A 236 KRMKEQGV-DLVDVSSGAIVP--ARMNVYPG---YQVPFAELIRREAD--IPTGAVGLITSG-WQAEEILQNGRADLVFL 306 (340)
T ss_dssp HHHHHTTC-CEEEEECCCSSC--CCCCCCTT---TTHHHHHHHHHHTT--CCEEEESSCCCH-HHHHHHHHTTSCSEEEE
T ss_pred HHHHHcCC-CEEEEecCCccC--CCCCCCcc---ccHHHHHHHHHHcC--CcEEeeCCCCCH-HHHHHHHHCCCeeEEEe
Confidence 66788999 999987522111 11001221 13456788998888 899988766653 3333334555 777775
Q ss_pred ccccccccCCCceeecCcchhHHHHHhcCC
Q psy9039 122 ESFVFGHMADEGLMNAQAGPLLRYRKQIGA 151 (251)
Q Consensus 122 ~~~~~~~~~~~Gli~~da~e~~~~r~~l~~ 151 (251)
+. + +..|..-..+.++.++.
T Consensus 307 GR---------~-~lanPdl~~ki~~~l~~ 326 (340)
T 3gr7_A 307 GR---------E-LLRNPYWPYAAARELGA 326 (340)
T ss_dssp CH---------H-HHHCTTHHHHHHHHTTC
T ss_pred cH---------H-HHhCchHHHHHHHHCCC
Confidence 21 1 12233444566666664
No 492
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=51.25 E-value=19 Score=32.16 Aligned_cols=39 Identities=15% Similarity=0.186 Sum_probs=34.2
Q ss_pred CHHHHHHHHhcCCCCEEEecCC-ChHhHHHhhc---CCEEEEe
Q psy9039 202 DVSQLMSVKNAVDLPILIGSGV-TSDNVEHYMT---ADALIIG 240 (251)
Q Consensus 202 ~~~~l~~vr~~~~~PV~vG~GI-~~~~v~~~~~---ADGvIVG 240 (251)
+.+.++++|+.+++||+.+.-+ +++.+.+++. +|++.+.
T Consensus 225 d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik 267 (378)
T 2qdd_A 225 TLDQCAHVARRVANPIMLDECLHEFSDHLAAWSRGACEGVKIK 267 (378)
T ss_dssp SHHHHHHHHTTCCSCEEECTTCCSHHHHHHHHHHTCCSEEEEC
T ss_pred CHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHhCCCCEEEec
Confidence 7888999999999999999999 7889998883 9999874
No 493
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=51.12 E-value=4 Score=36.10 Aligned_cols=46 Identities=11% Similarity=0.085 Sum_probs=33.1
Q ss_pred HHHHHhhCCCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEe
Q psy9039 35 CAEIRKVLPPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQIL 100 (251)
Q Consensus 35 ~~~a~~~a~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~ 100 (251)
++.+++.+++++++|+ |+|.+| ++| ....++++.+.++ +|+.+|+.
T Consensus 174 ~~~ai~Ra~ay~eAGA-D~i~~e---~~~--------------~~~~~~~i~~~~~--~P~~~n~~ 219 (305)
T 3ih1_A 174 LDEAIERANAYVKAGA-DAIFPE---ALQ--------------SEEEFRLFNSKVN--APLLANMT 219 (305)
T ss_dssp HHHHHHHHHHHHHHTC-SEEEET---TCC--------------SHHHHHHHHHHSC--SCBEEECC
T ss_pred HHHHHHHHHHHHHcCC-CEEEEc---CCC--------------CHHHHHHHHHHcC--CCEEEeec
Confidence 6778888899999999 999862 221 1244566777777 79877764
No 494
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=50.88 E-value=41 Score=30.21 Aligned_cols=79 Identities=11% Similarity=0.133 Sum_probs=50.3
Q ss_pred cCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEecCCCCCCCCCHHHHHHHHhcCCCCEEEecCC-ChHh
Q psy9039 149 IGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLIITGNATGDPADVSQLMSVKNAVDLPILIGSGV-TSDN 227 (251)
Q Consensus 149 l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~VTG~~~g~~~~~~~l~~vr~~~~~PV~vG~GI-~~~~ 227 (251)
++.+..+.+.+...+.|+++.++.-.... ++....+++|.+=|- + +.-.+..+|+++-+ +.+||++..|. |-+.
T Consensus 75 l~~e~~~~L~~~~~~~Gi~~~st~fD~~s-vd~l~~~~v~~~KI~-S--~~~~N~pLL~~va~-~gKPviLstGmstl~E 149 (350)
T 3g8r_A 75 LQPEQMQKLVAEMKANGFKAICTPFDEES-VDLIEAHGIEIIKIA-S--CSFTDWPLLERIAR-SDKPVVASTAGARRED 149 (350)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEECSHHH-HHHHHHTTCCEEEEC-S--SSTTCHHHHHHHHT-SCSCEEEECTTCCHHH
T ss_pred CCHHHHHHHHHHHHHcCCcEEeccCCHHH-HHHHHHcCCCEEEEC-c--ccccCHHHHHHHHh-hCCcEEEECCCCCHHH
Confidence 55566777777777777776444433322 233344678887442 2 23456788888765 68999999999 6666
Q ss_pred HHHhh
Q psy9039 228 VEHYM 232 (251)
Q Consensus 228 v~~~~ 232 (251)
+....
T Consensus 150 i~~Av 154 (350)
T 3g8r_A 150 IDKVV 154 (350)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55443
No 495
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=50.61 E-value=4.6 Score=35.67 Aligned_cols=21 Identities=14% Similarity=0.036 Sum_probs=17.5
Q ss_pred HHHHHhhCCCCcCCCCccEEEE
Q psy9039 35 CAEIRKVLPPSVPVGVQHGVIV 56 (251)
Q Consensus 35 ~~~a~~~a~~l~~~Gv~D~i~i 56 (251)
++.+++.++++.++|+ |+|.+
T Consensus 169 ldeAi~Ra~ay~eAGA-D~ifi 189 (302)
T 3fa4_A 169 YEESVARLRAARDAGA-DVGFL 189 (302)
T ss_dssp HHHHHHHHHHHHTTTC-SEEEE
T ss_pred HHHHHHHHHHHHHcCC-CEEee
Confidence 5667777788999999 99975
No 496
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=50.47 E-value=14 Score=31.87 Aligned_cols=76 Identities=12% Similarity=-0.098 Sum_probs=44.4
Q ss_pred CCCCcCCC-CccEEEEeecC----------CCCcccc-----CCCchHHHHHHHHHHHHHHHhC-CCCccEEEEEeeCCh
Q psy9039 42 LPPSVPVG-VQHGVIVENMH----------DVPYVLE-----AESGPEITANMTRLCAEIRKVL-PPSVPVGVQILSGCN 104 (251)
Q Consensus 42 a~~l~~~G-v~D~i~ieN~~----------~~Pf~~p-----~~~gp~i~aa~~~~i~~vr~~~-~~~~P~Gvn~~~N~~ 104 (251)
++.+++.| + |+|.+.|-. +.|...+ -..|+.......+.++++++.+ + +|+..+.=.+++
T Consensus 180 a~~~~~aG~~-d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~sg~~~~p~~~~~i~~v~~~~~~--ipvi~~GGI~~~ 256 (314)
T 2e6f_A 180 AAVLNEFPLV-KFVTCVNSVGNGLVIDAESESVVIKPKQGFGGLGGKYILPTALANVNAFYRRCPD--KLVFGCGGVYSG 256 (314)
T ss_dssp HHHHHTCTTE-EEEEECCCEEEEECEETTTTEESCCGGGGEEEEESGGGHHHHHHHHHHHHHHCTT--SEEEEESSCCSH
T ss_pred HHHHHhcCCc-eEEEEeCCCCccccccCCCCCcccccCcCCCccCcccccHHHHHHHHHHHHhcCC--CCEEEECCCCCH
Confidence 34457899 9 999988754 1111100 0023322233447788899888 5 798887665553
Q ss_pred HHHHHHHHHcCccceec
Q psy9039 105 KAALATAQAAGLDFIRA 121 (251)
Q Consensus 105 ~~~~~ia~a~g~~Fir~ 121 (251)
..... +.+.|++++..
T Consensus 257 ~da~~-~l~~GAd~V~i 272 (314)
T 2e6f_A 257 EDAFL-HILAGASMVQV 272 (314)
T ss_dssp HHHHH-HHHHTCSSEEE
T ss_pred HHHHH-HHHcCCCEEEE
Confidence 33333 24568888876
No 497
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=50.27 E-value=49 Score=29.72 Aligned_cols=60 Identities=18% Similarity=0.099 Sum_probs=29.0
Q ss_pred CCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeCChHHHHHH
Q psy9039 43 PPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQILSGCNKAALAT 110 (251)
Q Consensus 43 ~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~~~~~~i 110 (251)
+-++++|+ |||.+-=-.|=-++. .-.+..+.+..+++.+. ..+|+.+.+-.|....+...
T Consensus 87 ~~li~~Gv-~Gl~v~GTTGE~~~L---s~eEr~~vi~~~ve~~~----grvpViaGvg~~st~eai~l 146 (360)
T 4dpp_A 87 NIQIQNGA-EGVIVGGTTGEGQLM---SWDEHIMLIGHTVNCFG----GSIKVIGNTGSNSTREAIHA 146 (360)
T ss_dssp HHHHHTTC-CEEEESSTTTTGGGS---CHHHHHHHHHHHHHHHT----TTSEEEEECCCSSHHHHHHH
T ss_pred HHHHHcCC-CEEEecccccChhhC---CHHHHHHHHHHHHHHhC----CCCeEEEecCCCCHHHHHHH
Confidence 55678999 999872111111111 12233333333333332 22688887776664444443
No 498
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=50.10 E-value=57 Score=29.98 Aligned_cols=146 Identities=16% Similarity=0.138 Sum_probs=71.2
Q ss_pred CCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEEeeCChHHHHHHHHHcCccceecc
Q psy9039 43 PPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQILSGCNKAALATAQAAGLDFIRAE 122 (251)
Q Consensus 43 ~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~~~N~~~~~~~ia~a~g~~Fir~~ 122 (251)
+.|.+.|+ |-|++ |.|-+-| . +...++++.+... .+-.+...+. ....+..|...|.+.++..
T Consensus 68 ~~L~~~Gv-~~IEv----G~P~asp-----~----d~~~~~~i~~~~~--~~~v~~~~r~-~~~di~~A~~aG~~~V~i~ 130 (423)
T 3ivs_A 68 KALDNFGV-DYIEL----TSPVASE-----Q----SRQDCEAICKLGL--KCKILTHIRC-HMDDARVAVETGVDGVDVV 130 (423)
T ss_dssp HHHHHHTC-SEEEE----CCTTSCH-----H----HHHHHHHHHTSCC--SSEEEEEEES-CHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHcCC-CEEEE----eecccCH-----H----HHHHHHHHHhcCC--CCEEEEeecc-ChhhHHHHHHcCCCEEEEE
Confidence 56889999 99985 7765433 2 3334455554322 1222222222 2344566666777766642
Q ss_pred cccccccCCC------c----eeecCcchhHHHHHhcCCCcchhhhhhHhhccCCCCCCcccHHHHHHHhhhccccEEEe
Q psy9039 123 SFVFGHMADE------G----LMNAQAGPLLRYRKQIGADNVLVFTDIKKKHSSHAITADVDITETAKAASFFLSDGLII 192 (251)
Q Consensus 123 ~~~~~~~~~~------G----li~~da~e~~~~r~~l~~~~i~i~a~v~~k~~~~~~~~~~~i~~~a~~a~~~~~D~v~V 192 (251)
..+ ++. + -+...+.+..++.++.|. .+.+-..-..+ ++...+.++++.+...|+|.+.+
T Consensus 131 --~s~--Sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~-~V~~~~eda~r------~d~~~~~~v~~~~~~~Ga~~i~l 199 (423)
T 3ivs_A 131 --IGT--SQYLRKYSHGKDMTYIIDSATEVINFVKSKGI-EVRFSSEDSFR------SDLVDLLSLYKAVDKIGVNRVGI 199 (423)
T ss_dssp --EEC---------------CHHHHHHHHHHHHHHTTTC-EEEEEEESGGG------SCHHHHHHHHHHHHHHCCSEEEE
T ss_pred --eec--cHHHHHHHcCCCHHHHHHHHHHHHHHHHHCCC-EEEEEEccCcC------CCHHHHHHHHHHHHHhCCCcccc
Confidence 111 110 0 001114455666777665 33321100001 12233455555555578888766
Q ss_pred cCCCCCCC-C-CH-HHHHHHHhcCCCCE
Q psy9039 193 TGNATGDP-A-DV-SQLMSVKNAVDLPI 217 (251)
Q Consensus 193 TG~~~g~~-~-~~-~~l~~vr~~~~~PV 217 (251)
--+- |.. | .. ++++.+++..++|+
T Consensus 200 ~DTv-G~~~P~~v~~lv~~l~~~~~~~i 226 (423)
T 3ivs_A 200 ADTV-GCATPRQVYDLIRTLRGVVSCDI 226 (423)
T ss_dssp EETT-SCCCHHHHHHHHHHHHHHCSSEE
T ss_pred CCcc-CcCCHHHHHHHHHHHHhhcCCeE
Confidence 4332 222 2 23 56778888776654
No 499
>2jfz_A Glutamate racemase; cell WALL, isomerase, cell shape, peptidoglycan synthesis, peptidoglycan biosynthesis; HET: 003 DGL; 1.86A {Helicobacter pylori} PDB: 2jfx_A* 2jfy_A* 2w4i_A*
Probab=50.05 E-value=12 Score=31.61 Aligned_cols=27 Identities=19% Similarity=0.006 Sum_probs=23.2
Q ss_pred chHHHHHHHHHhhCCCCcCCCCccEEEE
Q psy9039 29 ANMTRLCAEIRKVLPPSVPVGVQHGVIV 56 (251)
Q Consensus 29 ~~~~~i~~~a~~~a~~l~~~Gv~D~i~i 56 (251)
.+.+.+.+...+.++.|++.|+ |+|.|
T Consensus 42 ~s~~~i~~~~~~~~~~L~~~g~-d~ivi 68 (255)
T 2jfz_A 42 KDPTTIKQFGLEALDFFKPHEI-ELLIV 68 (255)
T ss_dssp SCHHHHHHHHHHHHHHHGGGCC-SCEEE
T ss_pred CCHHHHHHHHHHHHHHHHHCCC-CEEEE
Confidence 4678888888888888999999 99986
No 500
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=49.69 E-value=21 Score=30.42 Aligned_cols=57 Identities=7% Similarity=0.079 Sum_probs=31.5
Q ss_pred chHHHHHHHHHhhCCCCcCCCCccEEEEeecCCCCccccCCCchHHHHHHHHHHHHHHHhCCCCccEEEEE
Q psy9039 29 ANMTRLCAEIRKVLPPSVPVGVQHGVIVENMHDVPYVLEAESGPEITANMTRLCAEIRKVLPPSVPVGVQI 99 (251)
Q Consensus 29 ~~~~~i~~~a~~~a~~l~~~Gv~D~i~ieN~~~~Pf~~p~~~gp~i~aa~~~~i~~vr~~~~~~~P~Gvn~ 99 (251)
.+.+++++.+ +.+.+.|+ |.||+ -+=|-.... . .......++.+|+...+ .|+.+-+
T Consensus 29 ~~~~e~~~~~----~~~~~~~~-D~vEl----RvD~l~~~~-~---~~~v~~~l~~lr~~~~~-~PiI~T~ 85 (257)
T 2yr1_A 29 EDDRKVLREA----EEVCRKQP-DLLEW----RADFFRAID-D---QERVLATANGLRNIAGE-IPILFTI 85 (257)
T ss_dssp SSHHHHHHHH----HHHHHSCC-SEEEE----EGGGCTTTT-C---HHHHHHHHHHHHHHSSS-CCEEEEC
T ss_pred CCHHHHHHHH----HHHhhcCC-CEEEE----EeecccccC-c---HHHHHHHHHHHHHhccC-CCEEEEE
Confidence 3555554443 33455689 99976 332222111 1 34466777888888732 5875543
Done!