Query         psy904
Match_columns 596
No_of_seqs    532 out of 2772
Neff          9.3 
Searched_HMMs 46136
Date          Fri Aug 16 17:25:23 2013
Command       hhsearch -i /work/01045/syshi/Psyhhblits/psy904.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/904hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 PHA02876 ankyrin repeat protei 100.0 1.6E-45 3.5E-50  413.0  36.9  332    8-343    38-472 (682)
  2 PHA02946 ankyin-like protein;  100.0 3.9E-45 8.5E-50  385.8  37.3  317    9-339    35-380 (446)
  3 PHA02876 ankyrin repeat protei 100.0 1.7E-44 3.7E-49  404.7  41.1  325    8-344   175-504 (682)
  4 KOG4369|consensus              100.0 2.4E-47 5.2E-52  401.0  15.3  400    3-402   749-1148(2131)
  5 PHA02730 ankyrin-like protein; 100.0 8.9E-44 1.9E-48  378.4  35.4  339    2-344    32-492 (672)
  6 PHA02874 ankyrin repeat protei 100.0 1.1E-42 2.3E-47  369.9  41.2  346   13-376     3-356 (434)
  7 PHA02917 ankyrin-like protein; 100.0 2.6E-42 5.6E-47  377.5  40.4  334    3-341    24-513 (661)
  8 PHA02716 CPXV016; CPX019; EVM0 100.0   8E-43 1.7E-47  378.3  36.0  316   20-343   151-569 (764)
  9 PHA02716 CPXV016; CPX019; EVM0 100.0 1.9E-41 4.2E-46  367.6  37.2  327    1-339   167-592 (764)
 10 PHA02946 ankyin-like protein;  100.0 1.2E-41 2.5E-46  359.3  33.8  288    2-305    64-379 (446)
 11 PHA03095 ankyrin-like protein; 100.0 7.1E-42 1.5E-46  368.7  33.0  290   16-311    19-320 (471)
 12 KOG0510|consensus              100.0 1.8E-42 3.8E-47  358.9  26.0  311    6-320    83-416 (929)
 13 PHA02874 ankyrin repeat protei 100.0 8.2E-41 1.8E-45  355.5  36.8  311    7-335    31-344 (434)
 14 PHA02730 ankyrin-like protein; 100.0 9.6E-41 2.1E-45  355.3  35.7  336    2-341    69-525 (672)
 15 KOG0510|consensus              100.0 1.1E-41 2.5E-46  352.9  26.5  323    8-342    58-405 (929)
 16 PHA03095 ankyrin-like protein; 100.0   2E-40 4.3E-45  357.5  34.0  287   49-341    19-317 (471)
 17 PHA03100 ankyrin repeat protei 100.0 1.5E-40 3.2E-45  359.2  31.9  282   22-309    13-311 (480)
 18 PHA03100 ankyrin repeat protei 100.0 3.2E-40   7E-45  356.6  30.5  271    2-278    26-313 (480)
 19 PHA02878 ankyrin repeat protei 100.0 1.3E-38 2.7E-43  342.7  36.0  287   40-337    33-324 (477)
 20 KOG4177|consensus              100.0 2.7E-40   6E-45  364.1  19.9  329    7-340   238-632 (1143)
 21 PHA02878 ankyrin repeat protei 100.0 5.2E-39 1.1E-43  345.6  29.4  306    8-323    34-348 (477)
 22 PHA02917 ankyrin-like protein; 100.0 1.8E-37 3.9E-42  339.4  35.8  314   24-343    12-481 (661)
 23 KOG4177|consensus              100.0 6.7E-40 1.5E-44  361.0  16.6  334    6-343   204-602 (1143)
 24 PHA02989 ankyrin repeat protei 100.0 1.5E-37 3.3E-42  335.3  33.6  285   13-305     2-313 (494)
 25 PHA02989 ankyrin repeat protei 100.0 2.1E-37 4.6E-42  334.2  34.0  287   46-340     2-315 (494)
 26 PHA02791 ankyrin-like protein; 100.0 4.6E-37   1E-41  302.5  28.1  239   88-343     9-249 (284)
 27 PHA02875 ankyrin repeat protei 100.0 7.3E-36 1.6E-40  316.1  33.2  295   79-377     3-311 (413)
 28 PHA02792 ankyrin-like protein; 100.0 8.2E-36 1.8E-40  314.3  30.5  329    7-343    67-482 (631)
 29 PHA02798 ankyrin-like protein; 100.0 1.5E-35 3.2E-40  319.5  29.2  281   23-311    17-321 (489)
 30 PHA02791 ankyrin-like protein; 100.0   3E-35 6.5E-40  289.6  27.7  236   21-307     9-246 (284)
 31 PHA02798 ankyrin-like protein; 100.0 6.7E-35 1.5E-39  314.3  30.9  277   56-341    17-318 (489)
 32 PHA02875 ankyrin repeat protei 100.0 2.7E-34 5.8E-39  304.1  30.2  242   11-256     2-246 (413)
 33 KOG0508|consensus              100.0 3.1E-34 6.7E-39  280.7  21.2  190    7-201    38-236 (615)
 34 KOG0508|consensus              100.0 3.5E-33 7.6E-38  273.3  22.3  215   16-234     9-236 (615)
 35 KOG4412|consensus              100.0 1.9E-33   4E-38  242.3  16.1  206  112-322     4-212 (226)
 36 PHA02792 ankyrin-like protein; 100.0 1.3E-31 2.9E-36  282.5  27.9  328    4-343    30-439 (631)
 37 KOG4412|consensus              100.0   7E-32 1.5E-36  232.6  16.3  106  180-288   106-211 (226)
 38 KOG4369|consensus              100.0 9.3E-33   2E-37  291.6   9.0  374   70-467   749-1148(2131)
 39 KOG0509|consensus              100.0 2.4E-30 5.2E-35  264.7  17.5  210   12-223    45-255 (600)
 40 KOG0509|consensus              100.0 7.7E-30 1.7E-34  261.0  17.9  208   80-290    46-254 (600)
 41 PHA02795 ankyrin-like protein; 100.0   2E-27 4.3E-32  242.5  23.3  231   95-340    66-316 (437)
 42 PHA02795 ankyrin-like protein; 100.0 3.3E-27 7.1E-32  241.0  22.0  208  126-343    64-291 (437)
 43 PHA02859 ankyrin repeat protei  99.9 1.3E-26 2.8E-31  220.3  21.1  174  146-325    21-203 (209)
 44 PHA02859 ankyrin repeat protei  99.9 1.1E-25 2.4E-30  214.0  20.8  176  110-292    20-203 (209)
 45 KOG0502|consensus               99.9 2.5E-25 5.5E-30  197.8   8.6  235   43-318    61-295 (296)
 46 KOG0502|consensus               99.9 1.1E-24 2.4E-29  193.7  11.2  220  110-336    61-280 (296)
 47 KOG0507|consensus               99.9 4.3E-24 9.3E-29  221.1  16.4  246   13-290     5-263 (854)
 48 TIGR00870 trp transient-recept  99.9 1.2E-23 2.6E-28  238.2  19.6  242    8-257    14-299 (743)
 49 KOG0507|consensus               99.9 8.3E-24 1.8E-28  219.1  16.2  252   47-335     6-278 (854)
 50 PLN03192 Voltage-dependent pot  99.9 6.6E-23 1.4E-27  233.5  23.3  174  146-324   525-699 (823)
 51 TIGR00870 trp transient-recept  99.9 1.8E-23   4E-28  236.7  18.6  234   43-303    16-279 (743)
 52 KOG0505|consensus               99.9 6.4E-23 1.4E-27  206.0  13.9  229   81-323    43-273 (527)
 53 PLN03192 Voltage-dependent pot  99.9 1.4E-21   3E-26  222.7  22.0  161  179-343   524-684 (823)
 54 KOG0505|consensus               99.9 3.4E-22 7.3E-27  200.8  13.3  231   14-290    43-273 (527)
 55 KOG0514|consensus               99.9   6E-22 1.3E-26  189.0  12.4  159  176-336   264-429 (452)
 56 KOG0514|consensus               99.9 1.9E-21 4.2E-26  185.6  11.5  162    5-168   262-429 (452)
 57 PHA02743 Viral ankyrin protein  99.9 5.8E-21 1.3E-25  174.8  14.0  139  203-343    10-157 (166)
 58 PHA02743 Viral ankyrin protein  99.8 2.1E-20 4.6E-25  171.0  14.7  136  178-315    18-162 (166)
 59 PHA02884 ankyrin repeat protei  99.8 1.6E-19 3.5E-24  177.9  20.0  151  179-338    32-186 (300)
 60 PHA02741 hypothetical protein;  99.8 7.8E-20 1.7E-24  168.1  14.3  130  208-339    16-157 (169)
 61 PHA02884 ankyrin repeat protei  99.8 1.9E-19 4.1E-24  177.4  16.5  154    7-170    29-186 (300)
 62 PHA02741 hypothetical protein;  99.8 4.4E-19 9.5E-24  163.1  13.7  129    7-135    17-156 (169)
 63 PHA02736 Viral ankyrin protein  99.8   2E-19 4.3E-24  163.0  10.9  132  207-340    11-152 (154)
 64 PHA02736 Viral ankyrin protein  99.8 1.2E-18 2.6E-23  157.9  10.6  130    6-137    12-152 (154)
 65 KOG0512|consensus               99.8 1.3E-17 2.9E-22  143.4  13.8  142  182-325    65-209 (228)
 66 KOG0512|consensus               99.7 2.1E-17 4.7E-22  142.2  13.6  147   10-157    62-209 (228)
 67 PF12796 Ank_2:  Ankyrin repeat  99.7 4.3E-17 9.3E-22  132.9  11.4   89  217-311     1-89  (89)
 68 KOG3676|consensus               99.7 1.1E-16 2.4E-21  169.0  16.3  212  113-336   103-330 (782)
 69 KOG0195|consensus               99.7 2.8E-17 6.1E-22  152.4   9.3  118  202-321    23-140 (448)
 70 KOG3676|consensus               99.7 3.3E-16 7.1E-21  165.4  16.4  211   80-303   103-330 (782)
 71 cd00204 ANK ankyrin repeats;    99.7 6.3E-16 1.4E-20  134.1  15.5  124  209-334     3-126 (126)
 72 PF12796 Ank_2:  Ankyrin repeat  99.7 2.8E-16   6E-21  128.1  11.1   87  252-342     1-87  (89)
 73 KOG0195|consensus               99.7 9.6E-17 2.1E-21  148.9   7.2  131  176-308    30-160 (448)
 74 cd00204 ANK ankyrin repeats;    99.7 2.7E-15 5.9E-20  130.1  14.7  123    8-131     4-126 (126)
 75 KOG4214|consensus               99.6 7.4E-15 1.6E-19  113.1   8.4  104  215-321     4-107 (117)
 76 COG0666 Arp FOG: Ankyrin repea  99.5 7.2E-13 1.6E-17  127.7  18.0  128  208-337    68-203 (235)
 77 COG0666 Arp FOG: Ankyrin repea  99.5 9.7E-13 2.1E-17  126.8  18.0  127  177-304    70-203 (235)
 78 KOG4214|consensus               99.5 2.3E-13 4.9E-18  105.0   8.1  102   13-116     4-105 (117)
 79 KOG1710|consensus               99.4 2.2E-12 4.7E-17  120.2  11.2  121  214-336    13-134 (396)
 80 PF13857 Ank_5:  Ankyrin repeat  99.4 3.7E-13 8.1E-18   98.5   4.4   55  267-321     1-56  (56)
 81 PF13637 Ank_4:  Ankyrin repeat  99.4 1.3E-12 2.8E-17   95.1   6.7   54   11-64      1-54  (54)
 82 KOG0515|consensus               99.4 2.4E-12 5.2E-17  128.9  10.1  119  215-335   552-673 (752)
 83 PF13637 Ank_4:  Ankyrin repeat  99.3   2E-12 4.3E-17   94.2   6.5   53  281-333     1-53  (54)
 84 PTZ00322 6-phosphofructo-2-kin  99.3 5.2E-12 1.1E-16  140.3  12.3  105  215-321    84-195 (664)
 85 KOG1710|consensus               99.3 6.4E-12 1.4E-16  117.1  10.8  124   10-133    11-134 (396)
 86 PTZ00322 6-phosphofructo-2-kin  99.3 1.2E-11 2.6E-16  137.3  11.8   87  250-336    84-170 (664)
 87 KOG0515|consensus               99.3 1.3E-11 2.8E-16  123.7   9.9   93  251-343   553-645 (752)
 88 PF13857 Ank_5:  Ankyrin repeat  99.2 7.6E-12 1.6E-16   91.6   4.6   55  232-288     1-56  (56)
 89 KOG0818|consensus               98.8 3.7E-08   8E-13   98.7  10.5   86  217-303   137-222 (669)
 90 KOG0783|consensus               98.7   1E-08 2.3E-13  108.4   4.8   84  206-290    45-128 (1267)
 91 PF13606 Ank_3:  Ankyrin repeat  98.7 2.3E-08   5E-13   62.3   3.7   29  280-308     1-29  (30)
 92 KOG0818|consensus               98.7   1E-07 2.2E-12   95.6   9.5   84  252-335   137-221 (669)
 93 KOG0782|consensus               98.6 7.1E-08 1.5E-12   97.9   7.9  118  217-336   870-989 (1004)
 94 PF13606 Ank_3:  Ankyrin repeat  98.6 4.2E-08 9.1E-13   61.2   3.8   29   10-38      1-29  (30)
 95 PF00023 Ank:  Ankyrin repeat H  98.6 7.1E-08 1.5E-12   62.0   4.2   32  280-311     1-32  (33)
 96 KOG0783|consensus               98.6 3.8E-08 8.2E-13  104.3   3.7   84   37-120    45-128 (1267)
 97 KOG0782|consensus               98.5 3.4E-07 7.4E-12   93.1   9.5  119   15-133   870-989 (1004)
 98 KOG0705|consensus               98.5 4.2E-07 9.1E-12   92.9   8.6   88  251-338   627-718 (749)
 99 KOG0506|consensus               98.5 1.5E-07 3.2E-12   94.0   5.3   94    8-101   503-596 (622)
100 PF00023 Ank:  Ankyrin repeat H  98.5 2.3E-07   5E-12   59.5   4.2   32   10-41      1-32  (33)
101 KOG0506|consensus               98.5 2.2E-07 4.7E-12   92.9   5.7   92  247-338   505-597 (622)
102 KOG3609|consensus               98.4 6.6E-07 1.4E-11   96.4   9.3  130  183-344    28-161 (822)
103 KOG2384|consensus               98.4   4E-07 8.7E-12   80.6   6.1   92  271-369     2-94  (223)
104 KOG0705|consensus               98.4 6.6E-07 1.4E-11   91.6   8.2   92  217-308   628-721 (749)
105 KOG0522|consensus               98.4 8.2E-07 1.8E-11   90.5   7.7   87  216-302    23-109 (560)
106 KOG0521|consensus               98.3 5.2E-07 1.1E-11  100.1   5.7  103  234-336   642-744 (785)
107 KOG0522|consensus               98.3 1.7E-06 3.6E-11   88.4   7.7   89  250-338    22-112 (560)
108 KOG3609|consensus               98.2 9.3E-06   2E-10   87.8  11.8  127    9-143    23-163 (822)
109 PTZ00121 MAEBL; Provisional     98.2  0.0001 2.2E-09   83.1  19.3    8  536-543  1860-1867(2084)
110 KOG0511|consensus               98.2 5.7E-06 1.2E-10   80.7   8.4   69  251-319    39-107 (516)
111 KOG0511|consensus               98.1 9.7E-06 2.1E-10   79.2   8.2   73   12-85     37-109 (516)
112 KOG2505|consensus               98.1 2.4E-05 5.3E-10   79.2  11.2   63  260-322   403-471 (591)
113 KOG4364|consensus               98.1 0.00014   3E-09   76.1  16.4    6  573-578   491-496 (811)
114 KOG0520|consensus               97.9 1.7E-05 3.7E-10   87.6   6.0  127  207-336   568-702 (975)
115 KOG2384|consensus               97.8 4.1E-05 8.8E-10   68.1   6.5   68   34-101     2-69  (223)
116 KOG0521|consensus               97.8   3E-05 6.4E-10   86.4   5.8   89  211-301   654-742 (785)
117 PTZ00266 NIMA-related protein   97.6  0.0013 2.9E-08   75.2  15.0    6   94-99    131-136 (1021)
118 KOG0520|consensus               97.6  0.0001 2.2E-09   81.7   5.9  132   37-168   567-702 (975)
119 KOG2505|consensus               97.3  0.0026 5.7E-08   64.9  11.8   67  223-289   401-471 (591)
120 PF03158 DUF249:  Multigene fam  97.0  0.0077 1.7E-07   53.9  10.0   44  150-200   147-190 (192)
121 PF03158 DUF249:  Multigene fam  96.8  0.0087 1.9E-07   53.6   9.4   44  285-334   147-190 (192)
122 smart00248 ANK ankyrin repeats  96.6  0.0033 7.3E-08   37.7   3.8   27  281-307     2-28  (30)
123 smart00248 ANK ankyrin repeats  96.5  0.0043 9.4E-08   37.1   3.9   27   11-37      2-28  (30)
124 PF06128 Shigella_OspC:  Shigel  96.5   0.023 4.9E-07   52.5   9.7  113  183-305   156-278 (284)
125 PF06128 Shigella_OspC:  Shigel  96.5   0.027 5.8E-07   52.0  10.0  115  216-340   156-280 (284)
126 PLN03218 maturation of RBCL 1;  95.9    0.14 3.1E-06   60.2  14.7  298   14-335   443-778 (1060)
127 PF05262 Borrelia_P83:  Borreli  95.9    0.33 7.1E-06   51.3  15.9    6  278-283   149-154 (489)
128 PLN03218 maturation of RBCL 1;  95.5    0.15 3.4E-06   59.9  13.3  276   12-309   476-789 (1060)
129 KOG2072|consensus               95.3     6.1 0.00013   43.8  24.2    8   25-32    150-157 (988)
130 PF05262 Borrelia_P83:  Borreli  95.0     1.8 3.9E-05   46.0  18.0   13  304-316   142-154 (489)
131 PLN03081 pentatricopeptide (PP  95.0     3.3 7.1E-05   47.2  21.8   17  286-302   502-518 (697)
132 PLN03081 pentatricopeptide (PP  94.6     9.6 0.00021   43.4  24.4   87   13-104   128-222 (697)
133 PLN03077 Protein ECB2; Provisi  93.0      22 0.00048   41.6  24.0  144   13-168   293-449 (857)
134 PF11929 DUF3447:  Domain of un  92.8    0.16 3.6E-06   39.3   4.1   47   13-66      8-54  (76)
135 PF11929 DUF3447:  Domain of un  92.6    0.36 7.8E-06   37.4   5.8   46   47-100     9-54  (76)
136 PLN03077 Protein ECB2; Provisi  92.1     8.7 0.00019   44.9  19.1   20  114-133   228-247 (857)
137 PF07946 DUF1682:  Protein of u  91.6    0.92   2E-05   46.0   8.9   18  284-301   160-177 (321)
138 PF07946 DUF1682:  Protein of u  89.5     1.2 2.7E-05   45.1   7.7   21  249-269   158-178 (321)
139 cd07920 Pumilio Pumilio-family  88.6     3.9 8.4E-05   41.5  10.8  125    5-129    15-147 (322)
140 PF15437 PGBA_C:  Plasminogen-b  81.6     6.4 0.00014   30.1   6.0   14  464-477    45-58  (86)
141 cd07920 Pumilio Pumilio-family  79.9      18 0.00038   36.6  11.1   50  245-295   198-251 (322)
142 KOG2689|consensus               77.8      43 0.00093   32.5  11.7    8  294-301    30-37  (290)
143 KOG2689|consensus               77.4      70  0.0015   31.1  12.9   19  251-269    20-38  (290)
144 PF02029 Caldesmon:  Caldesmon;  76.5      14  0.0003   39.5   9.0    8  577-584   427-434 (492)
145 KOG2963|consensus               73.7      12 0.00025   37.4   7.0   11  327-337   228-238 (405)
146 KOG3654|consensus               72.9      18  0.0004   37.7   8.4   11  537-547   490-500 (708)
147 PF00769 ERM:  Ezrin/radixin/mo  71.3   1E+02  0.0023   29.9  16.9    7  547-553   159-165 (246)
148 KOG3654|consensus               69.9      27 0.00058   36.6   8.8    8  581-588   569-576 (708)
149 KOG2963|consensus               61.9      31 0.00067   34.5   7.2   11  294-304   228-238 (405)
150 PF14387 DUF4418:  Domain of un  61.2     2.6 5.6E-05   36.0  -0.1   15  567-581    26-40  (124)
151 PF04053 Coatomer_WDAD:  Coatom  58.6      14  0.0003   39.3   4.8  105  148-270   323-428 (443)
152 KOG4055|consensus               48.3 2.1E+02  0.0046   25.9   9.8    8  543-550   174-181 (213)
153 KOG2253|consensus               47.5 2.6E+02  0.0056   30.9  11.8   13  468-480   349-361 (668)
154 KOG3614|consensus               47.2      39 0.00085   40.1   6.2   56   47-105   396-452 (1381)
155 PF04053 Coatomer_WDAD:  Coatom  46.9      38 0.00082   36.1   5.7  161   48-236   268-429 (443)
156 COG4499 Predicted membrane pro  46.0      46 0.00099   34.0   5.7    6  153-158   154-159 (434)
157 KOG2894|consensus               44.1 2.8E+02   0.006   27.1  10.2    6  439-444    71-76  (331)
158 KOG0345|consensus               42.5      87  0.0019   33.1   7.2   10  181-190   190-199 (567)
159 PF03622 IBV_3B:  IBV 3B protei  42.2     9.5 0.00021   27.2   0.3   15  574-588    39-53  (64)
160 PF07846 Metallothio_Cad:  Meta  41.1      15 0.00033   20.1   0.8   12  536-547    10-21  (21)
161 KOG0292|consensus               40.7      36 0.00078   38.5   4.4   99   82-203   600-698 (1202)
162 smart00816 Amb_V_allergen Amb   39.9      10 0.00022   24.7   0.2    8  573-580     3-10  (45)
163 cd02899 PLAT_SR Scavenger rece  39.7      10 0.00022   31.6   0.2   13  570-582    87-100 (109)
164 KOG2507|consensus               39.4      43 0.00094   34.5   4.4   11  564-574   372-382 (506)
165 KOG4709|consensus               38.9   2E+02  0.0043   26.4   8.0    8  545-552   169-176 (217)
166 PF03913 Amb_V_allergen:  Amb V  38.1      11 0.00024   24.4   0.1    8  573-580     2-9   (44)
167 KOG0513|consensus               38.0     2.3   5E-05   45.5  -4.9   15  247-261   168-182 (503)
168 KOG4709|consensus               36.8 1.9E+02  0.0042   26.5   7.5    8  560-567   182-189 (217)
169 KOG3039|consensus               36.2 1.6E+02  0.0035   28.1   7.3   11  564-574   156-166 (303)
170 KOG0345|consensus               35.2 1.2E+02  0.0026   32.1   6.9    9   38-46     49-57  (567)
171 PF01671 ASFV_360:  African swi  32.2 1.7E+02  0.0037   27.3   6.6  122   84-232    91-214 (215)
172 PF09292 Neil1-DNA_bind:  Endon  32.0      15 0.00032   23.6  -0.0   14  571-584     7-30  (39)
173 KOG0343|consensus               31.0      67  0.0014   34.7   4.4   52  456-507   639-690 (758)
174 KOG2253|consensus               30.7 7.9E+02   0.017   27.3  14.9   11  362-372   232-242 (668)
175 PRK14474 F0F1 ATP synthase sub  30.0 5.2E+02   0.011   25.1  14.4    8  549-556   178-185 (250)
176 PF12518 DUF3721:  Protein of u  29.5      23 0.00049   22.5   0.5    8  568-575    22-29  (34)
177 KOG0112|consensus               29.2      89  0.0019   35.6   5.1   21  532-552   868-888 (975)
178 KOG2007|consensus               28.8      26 0.00056   37.0   1.0   17  570-586   229-246 (586)
179 PF01671 ASFV_360:  African swi  28.7   2E+02  0.0043   26.9   6.5  100  117-237    91-192 (215)
180 TIGR03321 alt_F1F0_F0_B altern  27.6 5.7E+02   0.012   24.7  14.4   40  547-588   177-216 (246)
181 KOG3614|consensus               27.6 2.1E+02  0.0046   34.4   7.9   27   45-71    426-452 (1381)
182 KOG3915|consensus               27.0 4.3E+02  0.0093   27.8   9.1    8  532-539   614-621 (641)
183 KOG3039|consensus               26.8 1.8E+02  0.0039   27.8   5.9   12  567-578   154-165 (303)
184 KOG0292|consensus               26.8   2E+02  0.0044   32.9   7.3  136   13-171   548-700 (1202)
185 PF11208 DUF2992:  Protein of u  26.6 3.1E+02  0.0067   23.8   7.0   11  326-336    35-45  (132)
186 TIGR01069 mutS2 MutS2 family p  26.3 1.1E+03   0.023   27.4  17.0   12  245-256   331-342 (771)
187 KOG0388|consensus               25.3 1.2E+02  0.0026   33.9   5.1   11  539-549   543-553 (1185)
188 KOG3859|consensus               25.2 6.8E+02   0.015   24.8  10.3   12  263-274   201-212 (406)
189 KOG3859|consensus               24.1 7.1E+02   0.015   24.7  12.8   13  228-240   201-213 (406)
190 KOG4591|consensus               23.6      58  0.0013   29.9   2.1   44  281-324   222-270 (280)
191 PF04840 Vps16_C:  Vps16, C-ter  21.0 8.7E+02   0.019   24.5  14.4   50   16-65      8-63  (319)
192 KOG4591|consensus               20.9      60  0.0013   29.9   1.7   44   45-88    223-270 (280)
193 PF04840 Vps16_C:  Vps16, C-ter  20.7 8.9E+02   0.019   24.5  17.9   52   47-98      6-62  (319)

No 1  
>PHA02876 ankyrin repeat protein; Provisional
Probab=100.00  E-value=1.6e-45  Score=412.99  Aligned_cols=332  Identities=25%  Similarity=0.304  Sum_probs=287.7

Q ss_pred             CCCCCcHHHHHHhcCcHHHHHHHHHCCCC-ccccCCCCCcHHHHHH----------------------------------
Q psy904            8 ESNHDTALTLACAGGHEELVELLLSRGAD-IEHRDKKGFTPLILAA----------------------------------   52 (596)
Q Consensus         8 d~~g~t~L~~A~~~g~~~ivk~Ll~~g~~-i~~~d~~g~t~L~~A~----------------------------------   52 (596)
                      ++.+.||||.||..|+.++|++|++.+.+ ++..|..|.||||+|+                                  
T Consensus        38 ~~~~~t~LH~A~~~g~~e~V~~ll~~~~~~~~~~~~~~~tpLh~a~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  117 (682)
T PHA02876         38 ESIPFTAIHQALQLRQIDIVEEIIQQNPELIYITDHKCHSTLHTICIIPNVMDIVISLTLDCDIILDIKYASIILNKHKL  117 (682)
T ss_pred             ccccchHHHHHHHHHhhhHHHHHHHhCcccchhhchhhccccccccCCCCccccccccccchhhcccccHHHHHHHHHHH
Confidence            46789999999999999999999998766 5667788999999666                                  


Q ss_pred             ------------------------------------HcCCHHHHHHHHhCCCCccccccCCCChHHHHHHHCCcHHHHHH
Q psy904           53 ------------------------------------TAGHDKVVDILLNHKADMEAQSERTKDTPLSLACSGGRYEVVEL   96 (596)
Q Consensus        53 ------------------------------------~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~~~g~~eivk~   96 (596)
                                                          ..|+.+++++|++.|++++.. +..|.||||+|+..|+.++|++
T Consensus       118 ~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~i~k~Ll~~Gadvn~~-d~~G~TpLh~Aa~~G~~~iv~~  196 (682)
T PHA02876        118 DEACIHILKEAISGNDIHYDKINESIEYMKLIKERIQQDELLIAEMLLEGGADVNAK-DIYCITPIHYAAERGNAKMVNL  196 (682)
T ss_pred             HHHHHHHHHHHhcCCcccHHhhccchhhhHHHHHHHHCCcHHHHHHHHhCCCCCCCC-CCCCCCHHHHHHHCCCHHHHHH
Confidence                                                456788999999999998865 5679999999999999999999


Q ss_pred             HHhCCCCccCCCCCCCcHHHHHHhcCCHHHHHHHHhCCCCcc---------------------------ccCCCCCCCcH
Q psy904           97 LLTRGANKEHRNVSDYTPLSLAASGGYVNIIKLLLTHGAEIN---------------------------SRTGSKLGISP  149 (596)
Q Consensus        97 LL~~g~~~~~~d~~g~t~L~~A~~~g~~eiv~~Ll~~g~~~~---------------------------~~~~~~~g~t~  149 (596)
                      |+++|++++..+..|.||||+|+..|+.+++++|++.+.+++                           ....+..|.||
T Consensus       197 LL~~Gad~n~~~~~g~t~L~~A~~~~~~~ivk~Ll~~~~~~~~~~~~L~~ai~~~~~~~~~~Ll~~g~~vn~~d~~g~Tp  276 (682)
T PHA02876        197 LLSYGADVNIIALDDLSVLECAVDSKNIDTIKAIIDNRSNINKNDLSLLKAIRNEDLETSLLLYDAGFSVNSIDDCKNTP  276 (682)
T ss_pred             HHHCCCCcCccCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCcHHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCH
Confidence            999999999999999999999999999888888776654432                           11223458899


Q ss_pred             HHHHHHcCCH-HHHHHHHhcCCCcccccccCCCcHHHHHHHcC-CHHHHHHHHhcCCCcccccCCCChHHHHHHhc-CcH
Q psy904          150 LMLAAMNGHT-AAVKLLLDMGSDINAQIETNRNTALTLACFQG-RHEVVSLLLDRKANVEHRAKTGLTPLMEAASG-GYV  226 (596)
Q Consensus       150 L~~A~~~g~~-eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~-~~~ii~~Ll~~g~~~~~~~~~g~t~L~~A~~~-g~~  226 (596)
                      ||+|+..|+. .++++|+..|++++.. +..|.||||+|+..| ..+++++|+..|++++..+..|.||||+|+.. ++.
T Consensus       277 Lh~Aa~~~~~~~iv~lLl~~gadin~~-d~~g~TpLh~Aa~~g~~~~~v~~Ll~~gadin~~d~~g~TpLh~A~~~~~~~  355 (682)
T PHA02876        277 LHHASQAPSLSRLVPKLLERGADVNAK-NIKGETPLYLMAKNGYDTENIRTLIMLGADVNAADRLYITPLHQASTLDRNK  355 (682)
T ss_pred             HHHHHhCCCHHHHHHHHHHCCCCCCCc-CCCCCCHHHHHHHhCCCHHHHHHHHHcCCCCCCcccCCCcHHHHHHHhCCcH
Confidence            9999999986 5899999999998876 678899999999998 58999999999999999999999999999885 578


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCChHHHHHHhcCc-HHHHHHHHHCCC
Q psy904          227 EVGRVLLDKGADVNAPPVPSSRDTALTIAADKGHCRFVELLLSKGAQVEVKNKKGNSPLWLAANGGH-LSVVELLCKHGA  305 (596)
Q Consensus       227 ~iv~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~g~di~~~d~~g~TpL~~A~~~g~-~~iv~~Ll~~ga  305 (596)
                      +++.+|+..|++++.  .+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..++ ..++++|+++|+
T Consensus       356 ~iv~lLl~~gadin~--~d~~G~TpLh~Aa~~~~~~iv~~Ll~~gad~~~~~~~g~T~Lh~A~~~~~~~~~vk~Ll~~ga  433 (682)
T PHA02876        356 DIVITLLELGANVNA--RDYCDKTPIHYAAVRNNVVIINTLLDYGADIEALSQKIGTALHFALCGTNPYMSVKTLIDRGA  433 (682)
T ss_pred             HHHHHHHHcCCCCcc--CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCccccCCCCCchHHHHHHcCCHHHHHHHHHhCCC
Confidence            899999999999887  56789999999999999999999999999999999999999999987655 567899999999


Q ss_pred             CcccCCCCCCCHHHHHHHcC-CHHHHHHHHhCcCCCCCc
Q psy904          306 DIDSQDNRKVSCLMAAFRKG-HVKAVRWMVNHVAQFPSD  343 (596)
Q Consensus       306 d~~~~~~~g~t~L~~A~~~g-~~~iv~~Ll~~~~~~~~~  343 (596)
                      +++.+|..|.||||+|+..| +.+++++|+++|+++...
T Consensus       434 din~~d~~G~TpLh~Aa~~~~~~~iv~lLl~~Gad~n~~  472 (682)
T PHA02876        434 NVNSKNKDLSTPLHYACKKNCKLDVIEMLLDNGADVNAI  472 (682)
T ss_pred             CCCcCCCCCChHHHHHHHhCCcHHHHHHHHHCCCCCCCC
Confidence            99999999999999999876 689999999999976543


No 2  
>PHA02946 ankyin-like protein; Provisional
Probab=100.00  E-value=3.9e-45  Score=385.75  Aligned_cols=317  Identities=22%  Similarity=0.315  Sum_probs=280.2

Q ss_pred             CCCCcHHHHHHh--cCcHHHHHHHHHCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccccCCCChHHHHHH
Q psy904            9 SNHDTALTLACA--GGHEELVELLLSRGADIEHRDKKGFTPLILAATAGHDKVVDILLNHKADMEAQSERTKDTPLSLAC   86 (596)
Q Consensus         9 ~~g~t~L~~A~~--~g~~~ivk~Ll~~g~~i~~~d~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~   86 (596)
                      ..+.++||.++.  .++.++|++|++.|+++|..|..|.||||+|+..|+.++|++|+++|++++.. +..|.||||+|+
T Consensus        35 ~g~~~~Lh~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~G~TpLh~Aa~~g~~eiv~lLL~~GAdin~~-d~~g~TpLh~A~  113 (446)
T PHA02946         35 SGNYHILHAYCGIKGLDERFVEELLHRGYSPNETDDDGNYPLHIASKINNNRIVAMLLTHGADPNAC-DKQHKTPLYYLS  113 (446)
T ss_pred             CCCChHHHHHHHhcCCCHHHHHHHHHCcCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCC-CCCCCCHHHHHH
Confidence            345699998774  45789999999999999999999999999999999999999999999999854 678999999998


Q ss_pred             HCC--cHHHHHHHHhCCCCccC-CCCCCCcHHHHHHhcCCHHHHHHHHhCCCCccccCCCCCCCcHHHHHHHcC--CHHH
Q psy904           87 SGG--RYEVVELLLTRGANKEH-RNVSDYTPLSLAASGGYVNIIKLLLTHGAEINSRTGSKLGISPLMLAAMNG--HTAA  161 (596)
Q Consensus        87 ~~g--~~eivk~LL~~g~~~~~-~d~~g~t~L~~A~~~g~~eiv~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~g--~~ei  161 (596)
                      ..+  ..+++++|+++|++++. .+..|.|||+ |+..|+.+++++|++.|++++..+.  .|.||||+|+..+  +.++
T Consensus       114 ~~~~~~~e~v~lLl~~Gadin~~~d~~g~tpL~-aa~~~~~~vv~~Ll~~gad~~~~d~--~G~t~Lh~A~~~~~~~~~~  190 (446)
T PHA02946        114 GTDDEVIERINLLVQYGAKINNSVDEEGCGPLL-ACTDPSERVFKKIMSIGFEARIVDK--FGKNHIHRHLMSDNPKAST  190 (446)
T ss_pred             HcCCchHHHHHHHHHcCCCcccccCCCCCcHHH-HHHCCChHHHHHHHhccccccccCC--CCCCHHHHHHHhcCCCHHH
Confidence            866  48999999999999985 6889999997 6677999999999999998887664  4999999998755  4699


Q ss_pred             HHHHHhcCCCcccccccCCCcHHHHHHHcC--CHHHHHHHHhcCCCcccccCCCChHHHHHHhcCc-HHHHHHHHhCCCC
Q psy904          162 VKLLLDMGSDINAQIETNRNTALTLACFQG--RHEVVSLLLDRKANVEHRAKTGLTPLMEAASGGY-VEVGRVLLDKGAD  238 (596)
Q Consensus       162 v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~--~~~ii~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~-~~iv~~Ll~~g~~  238 (596)
                      +++|++.|++++.. +..|.||||+|+..+  +.+++.+|+. |++++..+..|.||||+|+..++ .+++++|+.+|.+
T Consensus       191 v~~Ll~~Gadin~~-d~~G~TpLH~Aa~~~~~~~~iv~lLl~-gadin~~d~~G~TpLh~A~~~~~~~~~~~~Ll~~g~~  268 (446)
T PHA02946        191 ISWMMKLGISPSKP-DHDGNTPLHIVCSKTVKNVDIINLLLP-STDVNKQNKFGDSPLTLLIKTLSPAHLINKLLSTSNV  268 (446)
T ss_pred             HHHHHHcCCCCccc-CCCCCCHHHHHHHcCCCcHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHhCChHHHHHHHHhCCCC
Confidence            99999999999886 678999999999886  8899999985 89999999999999999999988 5899999999865


Q ss_pred             CCCCC-------------------CCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCChHHHHHHhcCcHHHHHH
Q psy904          239 VNAPP-------------------VPSSRDTALTIAADKGHCRFVELLLSKGAQVEVKNKKGNSPLWLAANGGHLSVVEL  299 (596)
Q Consensus       239 ~~~~~-------------------~~~~g~t~L~~A~~~~~~~iv~~Ll~~g~di~~~d~~g~TpL~~A~~~g~~~iv~~  299 (596)
                      ++...                   ....|.||||+|+..|+.++|++|+++|+       .|.||||+|+..|+.+++++
T Consensus       269 ~~~~~~~~a~~~~~~~~~e~l~~~g~~~~~TpLh~Aa~~g~~eivk~Ll~~~~-------~~~t~L~~A~~~~~~~~v~~  341 (446)
T PHA02946        269 ITDQTVNICIFYDRDDVLEIINDKGKQYDSTDFKMAVEVGSIRCVKYLLDNDI-------ICEDAMYYAVLSEYETMVDY  341 (446)
T ss_pred             CCCcHHHHHHHcCchHHHHHHHHcCcccCCCHHHHHHHcCCHHHHHHHHHCCC-------ccccHHHHHHHhCHHHHHHH
Confidence            42210                   11346799999999999999999999875       47899999999999999999


Q ss_pred             HHHCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHhCcCC
Q psy904          300 LCKHGADIDSQDNRKVSCLMAAFRKGHVKAVRWMVNHVAQ  339 (596)
Q Consensus       300 Ll~~gad~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~  339 (596)
                      |+.+|++++.. ..|.|||++|+..++..+++.|+.+.++
T Consensus       342 Ll~~ga~~n~~-~~G~t~l~~a~~~~~~~~~~~ll~~~~~  380 (446)
T PHA02946        342 LLFNHFSVDSV-VNGHTCMSECVRLNNPVILSKLMLHNPT  380 (446)
T ss_pred             HHHCCCCCCCc-cccccHHHHHHHcCCHHHHHHHHhcCcc
Confidence            99999999986 5899999999999999999999997554


No 3  
>PHA02876 ankyrin repeat protein; Provisional
Probab=100.00  E-value=1.7e-44  Score=404.69  Aligned_cols=325  Identities=28%  Similarity=0.361  Sum_probs=276.9

Q ss_pred             CCCCCcHHHHHHhcCcHHHHHHHHHCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccccCCCChHHHHHHH
Q psy904            8 ESNHDTALTLACAGGHEELVELLLSRGADIEHRDKKGFTPLILAATAGHDKVVDILLNHKADMEAQSERTKDTPLSLACS   87 (596)
Q Consensus         8 d~~g~t~L~~A~~~g~~~ivk~Ll~~g~~i~~~d~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~~   87 (596)
                      +..|.||||+||..|+.++|++|++.|++++..+..|.||||+|+..|+.+++++|++.+.++..     +.++|+.|+.
T Consensus       175 d~~G~TpLh~Aa~~G~~~iv~~LL~~Gad~n~~~~~g~t~L~~A~~~~~~~ivk~Ll~~~~~~~~-----~~~~L~~ai~  249 (682)
T PHA02876        175 DIYCITPIHYAAERGNAKMVNLLLSYGADVNIIALDDLSVLECAVDSKNIDTIKAIIDNRSNINK-----NDLSLLKAIR  249 (682)
T ss_pred             CCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCccCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCC-----CcHHHHHHHH
Confidence            44566777777777777777777777777666666667777777777777777777666655432     3356677777


Q ss_pred             CCcHHHHHHHHhCCCCccCCCCCCCcHHHHHHhcCCH-HHHHHHHhCCCCccccCCCCCCCcHHHHHHHcC-CHHHHHHH
Q psy904           88 GGRYEVVELLLTRGANKEHRNVSDYTPLSLAASGGYV-NIIKLLLTHGAEINSRTGSKLGISPLMLAAMNG-HTAAVKLL  165 (596)
Q Consensus        88 ~g~~eivk~LL~~g~~~~~~d~~g~t~L~~A~~~g~~-eiv~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~g-~~eiv~~L  165 (596)
                      .++.+++.+|++.|++++..+..|.||||+|+..++. .++.+|+..|++++....  .|.||||+|+..| +.+++++|
T Consensus       250 ~~~~~~~~~Ll~~g~~vn~~d~~g~TpLh~Aa~~~~~~~iv~lLl~~gadin~~d~--~g~TpLh~Aa~~g~~~~~v~~L  327 (682)
T PHA02876        250 NEDLETSLLLYDAGFSVNSIDDCKNTPLHHASQAPSLSRLVPKLLERGADVNAKNI--KGETPLYLMAKNGYDTENIRTL  327 (682)
T ss_pred             cCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhCCCHHHHHHHHHHCCCCCCCcCC--CCCCHHHHHHHhCCCHHHHHHH
Confidence            7777777788888888999999999999999999997 599999999999887664  4999999999999 69999999


Q ss_pred             HhcCCCcccccccCCCcHHHHHHHc-CCHHHHHHHHhcCCCcccccCCCChHHHHHHhcCcHHHHHHHHhCCCCCCCCCC
Q psy904          166 LDMGSDINAQIETNRNTALTLACFQ-GRHEVVSLLLDRKANVEHRAKTGLTPLMEAASGGYVEVGRVLLDKGADVNAPPV  244 (596)
Q Consensus       166 l~~~~~~~~~~~~~~~t~L~~A~~~-~~~~ii~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~  244 (596)
                      +..|++++.. +..|.||||+|+.. ++.+++.+|+..|++++..+..|.||||+|+..|+.+++++|++.|++++.  .
T Consensus       328 l~~gadin~~-d~~g~TpLh~A~~~~~~~~iv~lLl~~gadin~~d~~G~TpLh~Aa~~~~~~iv~~Ll~~gad~~~--~  404 (682)
T PHA02876        328 IMLGADVNAA-DRLYITPLHQASTLDRNKDIVITLLELGANVNARDYCDKTPIHYAAVRNNVVIINTLLDYGADIEA--L  404 (682)
T ss_pred             HHcCCCCCCc-ccCCCcHHHHHHHhCCcHHHHHHHHHcCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCccc--c
Confidence            9999999876 77889999999985 578999999999999999999999999999999999999999999999987  5


Q ss_pred             CCCCCcHHHHHHHcCc-HHHHHHHHHCCCCCCCCCCCCChHHHHHHhcC-cHHHHHHHHHCCCCcccCCCCCCCHHHHHH
Q psy904          245 PSSRDTALTIAADKGH-CRFVELLLSKGAQVEVKNKKGNSPLWLAANGG-HLSVVELLCKHGADIDSQDNRKVSCLMAAF  322 (596)
Q Consensus       245 ~~~g~t~L~~A~~~~~-~~iv~~Ll~~g~di~~~d~~g~TpL~~A~~~g-~~~iv~~Ll~~gad~~~~~~~g~t~L~~A~  322 (596)
                      +..|.||||+|+..++ ..++++|+++|++++.+|..|.||||+|+..| +.+++++|+++|++++..|..|.|||++|+
T Consensus       405 ~~~g~T~Lh~A~~~~~~~~~vk~Ll~~gadin~~d~~G~TpLh~Aa~~~~~~~iv~lLl~~Gad~n~~d~~g~tpl~~a~  484 (682)
T PHA02876        405 SQKIGTALHFALCGTNPYMSVKTLIDRGANVNSKNKDLSTPLHYACKKNCKLDVIEMLLDNGADVNAINIQNQYPLLIAL  484 (682)
T ss_pred             CCCCCchHHHHHHcCCHHHHHHHHHhCCCCCCcCCCCCChHHHHHHHhCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
Confidence            6788999999997665 56799999999999999999999999999876 789999999999999999999999999999


Q ss_pred             HcCCHHHHHHHHhCcCCCCCch
Q psy904          323 RKGHVKAVRWMVNHVAQFPSDQ  344 (596)
Q Consensus       323 ~~g~~~iv~~Ll~~~~~~~~~~  344 (596)
                      .++  .++..|+.+|++.....
T Consensus       485 ~~~--~~v~~Ll~~~a~~~~~~  504 (682)
T PHA02876        485 EYH--GIVNILLHYGAELRDSR  504 (682)
T ss_pred             HhC--CHHHHHHHCCCCCCcCc
Confidence            876  57999999999877553


No 4  
>KOG4369|consensus
Probab=100.00  E-value=2.4e-47  Score=401.02  Aligned_cols=400  Identities=64%  Similarity=0.877  Sum_probs=388.0

Q ss_pred             CCCccCCCCCcHHHHHHhcCcHHHHHHHHHCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccccCCCChHH
Q psy904            3 VDSETESNHDTALTLACAGGHEELVELLLSRGADIEHRDKKGFTPLILAATAGHDKVVDILLNHKADMEAQSERTKDTPL   82 (596)
Q Consensus         3 i~~~~d~~g~t~L~~A~~~g~~~ivk~Ll~~g~~i~~~d~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~L   82 (596)
                      ||..++.+..|+|..||..|+.++|.+|+..|+++.++|..|++||.+|+..||+.+|+.|+.+.+++..+.+..+.|+|
T Consensus       749 id~~Te~n~~t~LT~acaggh~e~vellv~rganiehrdkkgf~plImaatagh~tvV~~llk~ha~veaQsdrtkdt~l  828 (2131)
T KOG4369|consen  749 IDPLTEPNIKTNLTSACAGGHREEVELLVVRGANIEHRDKKGFVPLIMAATAGHITVVQDLLKAHADVEAQSDRTKDTML  828 (2131)
T ss_pred             eccccCccccccccccccCccHHHHHHHHHhcccccccccccchhhhhhcccCchHHHHHHHhhhhhhhhhcccccCceE
Confidence            68889999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHCCcHHHHHHHHhCCCCccCCCCCCCcHHHHHHhcCCHHHHHHHHhCCCCccccCCCCCCCcHHHHHHHcCCHHHH
Q psy904           83 SLACSGGRYEVVELLLTRGANKEHRNVSDYTPLSLAASGGYVNIIKLLLTHGAEINSRTGSKLGISPLMLAAMNGHTAAV  162 (596)
Q Consensus        83 ~~A~~~g~~eivk~LL~~g~~~~~~d~~g~t~L~~A~~~g~~eiv~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~g~~eiv  162 (596)
                      .+||..|+.++|.+||..|++-.+++...+|||.+|...|.+++|..|+..|..++.+..++.|..||++|.++||...+
T Consensus       829 Slacsggr~~vvelLl~~gankehrnvsDytPlsla~Sggy~~iI~~llS~GseInSrtgSklgisPLmlatmngh~~at  908 (2131)
T KOG4369|consen  829 SLACSGGRTRVVELLLNAGANKEHRNVSDYTPLSLARSGGYTKIIHALLSSGSEINSRTGSKLGISPLMLATMNGHQAAT  908 (2131)
T ss_pred             EEecCCCcchHHHHHHHhhccccccchhhcCchhhhcCcchHHHHHHHhhcccccccccccccCcchhhhhhhccccHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccCCCChHHHHHHhcCcHHHHHHHHhCCCCCCCC
Q psy904          163 KLLLDMGSDINAQIETNRNTALTLACFQGRHEVVSLLLDRKANVEHRAKTGLTPLMEAASGGYVEVGRVLLDKGADVNAP  242 (596)
Q Consensus       163 ~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~  242 (596)
                      +.|++.|.+++..+..+.+|+|.+|+..|+.+++.+||...+++.++...|.|||+-++..|++++-.+||..|+|+|..
T Consensus       909 ~~ll~~gsdiNaqIeTNrnTaltla~fqgr~evv~lLLa~~anvehRaktgltplme~AsgGyvdvg~~li~~gad~nas  988 (2131)
T KOG4369|consen  909 LSLLQPGSDINAQIETNRNTALTLALFQGRPEVVFLLLAAQANVEHRAKTGLTPLMEMASGGYVDVGNLLIAAGADTNAS  988 (2131)
T ss_pred             HHHhcccchhccccccccccceeeccccCcchHHHHHHHHhhhhhhhcccCCcccchhhcCCccccchhhhhcccccccC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             CCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCChHHHHHHhcCcHHHHHHHHHCCCCcccCCCCCCCHHHHHH
Q psy904          243 PVPSSRDTALTIAADKGHCRFVELLLSKGAQVEVKNKKGNSPLWLAANGGHLSVVELLCKHGADIDSQDNRKVSCLMAAF  322 (596)
Q Consensus       243 ~~~~~g~t~L~~A~~~~~~~iv~~Ll~~g~di~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~~~~g~t~L~~A~  322 (596)
                      .+.....|+|.+++..|+..+|..|+...+.+..+|+.|.|+|++|+..|++..+.+|+++++|++..|+...++++.|+
T Consensus       989 Pvp~T~dtalti~a~kGh~kfv~~lln~~atv~v~NkkG~T~Lwla~~Gg~lss~~il~~~~ad~d~qdnr~~S~~maaf 1068 (2131)
T KOG4369|consen  989 PVPNTWDTALTIPANKGHTKFVPKLLNGDATVRVPNKKGCTVLWLASAGGALSSCPILVSSVADADQQDNRTNSRTMAAF 1068 (2131)
T ss_pred             CCCCcCCccceeecCCCchhhhHHhhCCccceecccCCCCcccchhccCCccccchHHhhcccChhhhhcccccccHHHH
Confidence            88899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HcCCHHHHHHHHhCcCCCCCchHHHHHHhhcCcHHHHHhhhhhhHHHHHHhhHHHHHhhhhHHHHHHhhhHHHHHHHHHH
Q psy904          323 RKGHVKAVRWMVNHVAQFPSDQEMTRYIQTVNDKELLDKCQECSMVIRVAKNQQAERANKNANILLEELDMEKWREESKR  402 (596)
Q Consensus       323 ~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~e~~~~~~~~~~~~  402 (596)
                      +.||+.||+|+......++...++.+++.++.+..+...|..|..+++.++.-++...+..+..|++..+.+.-+++.++
T Consensus      1069 RKgh~~iVk~mv~~atqfps~q~~ir~~~Tvss~~i~~kc~~c~~i~rSakqAQa~sa~~~a~~lle~~dee~s~qe~~~ 1148 (2131)
T KOG4369|consen 1069 RKGHFAIVKKMVPPATQFPSVQSTIRSLPTVSSAPITSKCAPCTFIPRSAKQAQASSAKMEAFSLLEPTDEEVSTQEQPM 1148 (2131)
T ss_pred             HhchhheeccccCchhcCCcHHHHHHhcccccccchhccccchhhhhhhhHHHHHHHhhhhhhhcccchhhhhhhhhhhh
Confidence            99999999999999999999999999999999999999999999999999999999999999988888776665555443


No 5  
>PHA02730 ankyrin-like protein; Provisional
Probab=100.00  E-value=8.9e-44  Score=378.45  Aligned_cols=339  Identities=17%  Similarity=0.231  Sum_probs=263.9

Q ss_pred             CCCCccCCCCCcHHHHHHhcC---cHHHHHHHHHCCCCccccCCCCCcHHHHHHHcC--CHHHHHHHHhCCCCcccc-cc
Q psy904            2 DVDSETESNHDTALTLACAGG---HEELVELLLSRGADIEHRDKKGFTPLILAATAG--HDKVVDILLNHKADMEAQ-SE   75 (596)
Q Consensus         2 di~~~~d~~g~t~L~~A~~~g---~~~ivk~Ll~~g~~i~~~d~~g~t~L~~A~~~g--~~eiv~~Ll~~~~~~~~~-~~   75 (596)
                      |||...|..|.||||+|+..|   +.++|++||++|++++..|..|.||||+|+..+  +.++|++|++.|+..... .+
T Consensus        32 ~in~~kd~~G~TaLh~A~~~~~~~~~eivklLLs~GAdin~kD~~G~TPLh~Aa~~~~~~~eIv~~Ll~~~~~~~~~~~~  111 (672)
T PHA02730         32 NLSKHIDRRGNNALHCYVSNKCDTDIKIVRLLLSRGVERLCRNNEGLTPLGVYSKRKYVKSQIVHLLISSYSNASNELTS  111 (672)
T ss_pred             chhhhcCCCCCcHHHHHHHcCCcCcHHHHHHHHhCCCCCcccCCCCCChHHHHHHcCCCcHHHHHHHHhcCCCCCccccc
Confidence            677788899999999999997   599999999999999999999999999999977  799999999997654222 34


Q ss_pred             CCCChHHHHHHH--CCcHHHHHHHHh-CCCCccCCCC-----CCCcHHHHHHhcCCHHHHHHHHhCCCCcccc------C
Q psy904           76 RTKDTPLSLACS--GGRYEVVELLLT-RGANKEHRNV-----SDYTPLSLAASGGYVNIIKLLLTHGAEINSR------T  141 (596)
Q Consensus        76 ~~~~t~L~~A~~--~g~~eivk~LL~-~g~~~~~~d~-----~g~t~L~~A~~~g~~eiv~~Ll~~g~~~~~~------~  141 (596)
                      ..+++|||.++.  ++++++|++|+. .+++++....     .|.+|++++...+++++|++|+++|++++..      .
T Consensus       112 ~~~d~~l~~y~~s~n~~~~~vk~Li~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~eIvklLi~~g~~v~g~~~~~~~~  191 (672)
T PHA02730        112 NINDFDLYSYMSSDNIDLRLLKYLIVDKRIRPSKNTNYYIHCLGLVDIYVTTPNPRPEVLLWLLKSECYSTGYVFRSCMY  191 (672)
T ss_pred             ccCCchHHHHHHhcCCcHHHHHHHHHhcCCChhhhhhhhccccchhhhhHhcCCCchHHHHHHHHcCCcccccccccccc
Confidence            457889988888  889999999996 6677766532     6789999999999999999999999988522      1


Q ss_pred             CCCCCCcHHHHHH------HcCCHHHHHHHHhcCCCcccccccCCCcHHHH--HHHcCCHHHHHHHHh------------
Q psy904          142 GSKLGISPLMLAA------MNGHTAAVKLLLDMGSDINAQIETNRNTALTL--ACFQGRHEVVSLLLD------------  201 (596)
Q Consensus       142 ~~~~g~t~L~~A~------~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~--A~~~~~~~ii~~Ll~------------  201 (596)
                      ....+.|.||+++      .+++.+++++|+.+|++++.. +..|.||||+  ++..++.+++++|++            
T Consensus       192 ~~~~c~~~l~~~il~~~~~~~n~~eiv~lLIs~GadIN~k-d~~G~TpLh~~~~~~~~~~eiv~~Li~~~~~~~~~~~~~  270 (672)
T PHA02730        192 DSDRCKNSLHYYILSHRESESLSKDVIKCLIDNNVSIHGR-DEGGSLPIQYYWSCSTIDIEIVKLLIKDVDTCSVYDDIS  270 (672)
T ss_pred             cCCccchhHHHHHHhhhhhhccCHHHHHHHHHCCCCCCCC-CCCCCCHHHHHHHcCcccHHHHHHHHhcccccccccccc
Confidence            2222334455333      446788999999999988876 6788899985  445566888888888            


Q ss_pred             --------------------cCCCccc--------------------ccCCCCh---------------------HHHHH
Q psy904          202 --------------------RKANVEH--------------------RAKTGLT---------------------PLMEA  220 (596)
Q Consensus       202 --------------------~g~~~~~--------------------~~~~g~t---------------------~L~~A  220 (596)
                                          +|++...                    .+..|.+                     .||.-
T Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~i~~~~~~~~~~~~q~~l~~Y  350 (672)
T PHA02730        271 QPYIRGVLADYLNKRFRVTPYNVDMEIVNLLIEGRHTLIDVMRSITSYDSREYNHYIIDNILKRFRQQDESIVQAMLINY  350 (672)
T ss_pred             chhhhhhHHHhhhhhhhcccCCcchHHHHHHhhccCcchhhhhccccccccccchhHHHHHHHhhhccchhHHHHHHHHH
Confidence                                6666544                    3445543                     55655


Q ss_pred             HhcC---cHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHcCc----HHHHHHHHHCCC--CCCCCCCCCChHHHH---H
Q psy904          221 ASGG---YVEVGRVLLDKGADVNAPPVPSSRDTALTIAADKGH----CRFVELLLSKGA--QVEVKNKKGNSPLWL---A  288 (596)
Q Consensus       221 ~~~g---~~~iv~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~----~~iv~~Ll~~g~--di~~~d~~g~TpL~~---A  288 (596)
                      ...+   +.+++++|+++|+++|..   ..|.||||+|+..++    .+++++|+++|+  +++..|..|.||||.   |
T Consensus       351 ~~~~~~v~ieIvelLIs~GAdIN~k---~~G~TpLH~Aa~~nnn~i~~eIvelLIs~Ga~~dIN~kd~~G~T~Lh~~i~a  427 (672)
T PHA02730        351 LHYGDMVSIPILRCMLDNGATMDKT---TDNNYPLHDYFVNNNNIVDVNVVRFIVENNGHMAINHVSNNGRLCMYGLILS  427 (672)
T ss_pred             HhcCCcCcHHHHHHHHHCCCCCCcC---CCCCcHHHHHHHHcCCcchHHHHHHHHHcCCCccccccccCCCchHhHHHHH
Confidence            5544   588888888888888852   578888888887764    788888888886  588888888888884   3


Q ss_pred             HhcC---------cHHHHHHHHHCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHhCcCCCCCch
Q psy904          289 ANGG---------HLSVVELLCKHGADIDSQDNRKVSCLMAAFRKGHVKAVRWMVNHVAQFPSDQ  344 (596)
Q Consensus       289 ~~~g---------~~~iv~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~  344 (596)
                      ...+         ..+++++|+.+|++++..|..|.||||+|+..++.+++++|+.+|+++....
T Consensus       428 ~~~n~~~~~~e~~~~~ivk~LIs~GADINakD~~G~TPLh~Aa~~~~~eive~LI~~GAdIN~~d  492 (672)
T PHA02730        428 RFNNCGYHCYETILIDVFDILSKYMDDIDMIDNENKTLLYYAVDVNNIQFARRLLEYGASVNTTS  492 (672)
T ss_pred             HhccccccccchhHHHHHHHHHhcccchhccCCCCCCHHHHHHHhCCHHHHHHHHHCCCCCCCCC
Confidence            2222         2356888888888888888888888888888888888888888888765543


No 6  
>PHA02874 ankyrin repeat protein; Provisional
Probab=100.00  E-value=1.1e-42  Score=369.94  Aligned_cols=346  Identities=23%  Similarity=0.350  Sum_probs=295.3

Q ss_pred             cHHHHHHhcCcHHHHHHHHHC-CCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccccCCCChHHHHHHHCCcH
Q psy904           13 TALTLACAGGHEELVELLLSR-GADIEHRDKKGFTPLILAATAGHDKVVDILLNHKADMEAQSERTKDTPLSLACSGGRY   91 (596)
Q Consensus        13 t~L~~A~~~g~~~ivk~Ll~~-g~~i~~~d~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~~~g~~   91 (596)
                      ..|..|+..|++++|++|+.. +..++..+..|.||||.|+..|+.++|++|++.|++++.. +..|.||||+|+..|+.
T Consensus         3 ~~l~~ai~~gd~~~v~~ll~~~~~~~n~~~~~~~tpL~~A~~~g~~~iv~~Ll~~Ga~~n~~-~~~~~t~L~~A~~~~~~   81 (434)
T PHA02874          3 QDLRMCIYSGDIEAIEKIIKNKGNCINISVDETTTPLIDAIRSGDAKIVELFIKHGADINHI-NTKIPHPLLTAIKIGAH   81 (434)
T ss_pred             HHHHHHHhcCCHHHHHHHHHcCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC-CCCCCCHHHHHHHcCCH
Confidence            468999999999999999985 5668888899999999999999999999999999998764 55789999999999999


Q ss_pred             HHHHHHHhCCCCccCCCCCCCcHHHHHHhcCCHHHHHHHHhCCCCccccCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCC
Q psy904           92 EVVELLLTRGANKEHRNVSDYTPLSLAASGGYVNIIKLLLTHGAEINSRTGSKLGISPLMLAAMNGHTAAVKLLLDMGSD  171 (596)
Q Consensus        92 eivk~LL~~g~~~~~~d~~g~t~L~~A~~~g~~eiv~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~  171 (596)
                      +++++|+++|+++...          ++...+.+++++|++.|++++....  .|.||||+|+..|+.+++++|++.|++
T Consensus        82 ~iv~~Ll~~g~~~~~~----------~~~~~~~~~i~~ll~~g~d~n~~~~--~g~T~Lh~A~~~~~~~~v~~Ll~~gad  149 (434)
T PHA02874         82 DIIKLLIDNGVDTSIL----------PIPCIEKDMIKTILDCGIDVNIKDA--ELKTFLHYAIKKGDLESIKMLFEYGAD  149 (434)
T ss_pred             HHHHHHHHCCCCCCcc----------hhccCCHHHHHHHHHCcCCCCCCCC--CCccHHHHHHHCCCHHHHHHHHhCCCC
Confidence            9999999999876432          2344578999999999999887654  499999999999999999999999999


Q ss_pred             cccccccCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccCCCChHHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCCCcH
Q psy904          172 INAQIETNRNTALTLACFQGRHEVVSLLLDRKANVEHRAKTGLTPLMEAASGGYVEVGRVLLDKGADVNAPPVPSSRDTA  251 (596)
Q Consensus       172 ~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~g~t~  251 (596)
                      ++.. +..|.||||+|+..++.+++++|++.|++++..+..|.||||+|+..|+.+++++|++.|++++.  .+..|.||
T Consensus       150 ~n~~-d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n~~~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~i~~--~~~~g~Tp  226 (434)
T PHA02874        150 VNIE-DDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNGESPLHNAAEYGDYACIKLLIDHGNHIMN--KCKNGFTP  226 (434)
T ss_pred             CCCc-CCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCcC--CCCCCCCH
Confidence            9876 67899999999999999999999999999999999999999999999999999999999999876  55789999


Q ss_pred             HHHHHHcCcHHHHHHHHHCCCCCCCCCCCCChHHHHHHhcC-cHHHHHHHHHCCCCcccCCCCCCCHHHHHHHcC-CHHH
Q psy904          252 LTIAADKGHCRFVELLLSKGAQVEVKNKKGNSPLWLAANGG-HLSVVELLCKHGADIDSQDNRKVSCLMAAFRKG-HVKA  329 (596)
Q Consensus       252 L~~A~~~~~~~iv~~Ll~~g~di~~~d~~g~TpL~~A~~~g-~~~iv~~Ll~~gad~~~~~~~g~t~L~~A~~~g-~~~i  329 (596)
                      ||+|+..+. .++.+|+ .|++++..|..|.||||+|+..+ +.+++++|+.+|++++.+|..|.|||++|+..+ ...+
T Consensus       227 L~~A~~~~~-~~i~~Ll-~~~~in~~d~~G~TpLh~A~~~~~~~~iv~~Ll~~gad~n~~d~~g~TpL~~A~~~~~~~~~  304 (434)
T PHA02874        227 LHNAIIHNR-SAIELLI-NNASINDQDIDGSTPLHHAINPPCDIDIIDILLYHKADISIKDNKGENPIDTAFKYINKDPV  304 (434)
T ss_pred             HHHHHHCCh-HHHHHHH-cCCCCCCcCCCCCCHHHHHHhcCCcHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHhCCccHH
Confidence            999999765 5667776 68999999999999999999875 899999999999999999999999999999987 7789


Q ss_pred             HHHHHhCcCCCCCc-----hHHHHHHhhcCcHHHHHhhhhhhHHHHHHhhHH
Q psy904          330 VRWMVNHVAQFPSD-----QEMTRYIQTVNDKELLDKCQECSMVIRVAKNQQ  376 (596)
Q Consensus       330 v~~Ll~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  376 (596)
                      ++.|+.++......     ..............+......|...|...+...
T Consensus       305 ik~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~c~~ei~~mk~~~  356 (434)
T PHA02874        305 IKDIIANAVLIKEADKLKDSDFLEHIEIKDNKEFSDFIKECNEEIEDMKKTK  356 (434)
T ss_pred             HHHHHHhcCchhhccccchhHHHHHHHHhccchHHHHHHHHHHHHHHHhcce
Confidence            99999988643221     112222222233344444556666666555443


No 7  
>PHA02917 ankyrin-like protein; Provisional
Probab=100.00  E-value=2.6e-42  Score=377.49  Aligned_cols=334  Identities=18%  Similarity=0.225  Sum_probs=253.9

Q ss_pred             CCCccCCCCCcHHHHHHhc---CcHHHHHHHHHCCCCccccCCCCCcHHHHHHHcCCHH----HHHHHHhCCCCcccccc
Q psy904            3 VDSETESNHDTALTLACAG---GHEELVELLLSRGADIEHRDKKGFTPLILAATAGHDK----VVDILLNHKADMEAQSE   75 (596)
Q Consensus         3 i~~~~d~~g~t~L~~A~~~---g~~~ivk~Ll~~g~~i~~~d~~g~t~L~~A~~~g~~e----iv~~Ll~~~~~~~~~~~   75 (596)
                      ++...|.+|.||||+||..   |+.++|++||+.|++++..+..|.||||+|+..|+.+    ++++|++.+...+..  
T Consensus        24 ~~~~~d~~g~t~Lh~a~~~~~~~~~~~v~~Ll~~ga~v~~~~~~g~TpL~~Aa~~g~~~v~~~~~~~Ll~~~~~~n~~--  101 (661)
T PHA02917         24 PNDTRNQFKNNALHAYLFNEHCNNVEVVKLLLDSGTNPLHKNWRQLTPLEEYTNSRHVKVNKDIAMALLEATGYSNIN--  101 (661)
T ss_pred             cccccCCCCCcHHHHHHHhhhcCcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCChhHHHHHHHHHHhccCCCCCC--
Confidence            3455688999999997555   8899999999999999999999999999999999854    567787765432221  


Q ss_pred             CCCChHHHHHHHCCcHHHHHHHHhCCCCccCCCCCCCcHHHHHH--hcCCHHHHHHHHhCCCCccccCC-CCCC------
Q psy904           76 RTKDTPLSLACSGGRYEVVELLLTRGANKEHRNVSDYTPLSLAA--SGGYVNIIKLLLTHGAEINSRTG-SKLG------  146 (596)
Q Consensus        76 ~~~~t~L~~A~~~g~~eivk~LL~~g~~~~~~d~~g~t~L~~A~--~~g~~eiv~~Ll~~g~~~~~~~~-~~~g------  146 (596)
                       ...+++++|+.+|+.++|++|+++|++++..|..|.||||+++  ..|+.+++++|+++|++++.... +..|      
T Consensus       102 -~~~~~~~~a~~~~~~e~vk~Ll~~Gadin~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn~~d~~~~~g~~~~~~  180 (661)
T PHA02917        102 -DFNIFSYMKSKNVDVDLIKVLVEHGFDLSVKCENHRSVIENYVMTDDPVPEIIDLFIENGCSVLYEDEDDEYGYAYDDY  180 (661)
T ss_pred             -CcchHHHHHhhcCCHHHHHHHHHcCCCCCccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCccccccccccccccccc
Confidence             1236777888888899999999999999888888999998543  46788999999999888864321 1223      


Q ss_pred             -----CcHHHHHHH-----------cCCHHHHHHHHhcCCCcccccccCCCcHHHHHHHcCCH--HHHHHHHhcCCCcc-
Q psy904          147 -----ISPLMLAAM-----------NGHTAAVKLLLDMGSDINAQIETNRNTALTLACFQGRH--EVVSLLLDRKANVE-  207 (596)
Q Consensus       147 -----~t~L~~A~~-----------~g~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~--~ii~~Ll~~g~~~~-  207 (596)
                           .||||+|+.           +++.+++++|+.+|++++.. +..|.||||+|+.+|+.  +++++|++ |++++ 
T Consensus       181 ~~~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gadvn~~-d~~G~TpLh~A~~~g~~~~eivk~Li~-g~d~~~  258 (661)
T PHA02917        181 QPRNCGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHGIKPSSI-DKNYCTALQYYIKSSHIDIDIVKLLMK-GIDNTA  258 (661)
T ss_pred             cccccccHHHHHHhhcccccccccccCcHHHHHHHHHCCCCcccC-CCCCCcHHHHHHHcCCCcHHHHHHHHh-CCcccc
Confidence                 588988875           45788999999999888876 67788899998888874  67887765 55432 


Q ss_pred             ---cccCCCChHHHHHH---------------------------------------------------------------
Q psy904          208 ---HRAKTGLTPLMEAA---------------------------------------------------------------  221 (596)
Q Consensus       208 ---~~~~~g~t~L~~A~---------------------------------------------------------------  221 (596)
                         ..+..|.+|+++|+                                                               
T Consensus       259 ~~~~~~~~~~~~~~~a~yl~~~~~~~~~v~~~iv~~Li~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  338 (661)
T PHA02917        259 YSYIDDLTCCTRGIMADYLNSDYRYNKDVDLDLVKLFLENGKPHGIMCSIVPLWRNDKETISLILKTMNSDVLQHILIEY  338 (661)
T ss_pred             cccccCcccccchHHHHHHHhhccccccchHHHHHHHHhCCCCCceeEeeecccccchHHHHHHHHHhchHHHHHHHHHH
Confidence               12222222222222                                                               


Q ss_pred             -hcCc--HHHHHHHHhCCCCCCCCC----------------------------CCCCCCcHHHHHHHcC-----------
Q psy904          222 -SGGY--VEVGRVLLDKGADVNAPP----------------------------VPSSRDTALTIAADKG-----------  259 (596)
Q Consensus       222 -~~g~--~~iv~~Ll~~g~~~~~~~----------------------------~~~~g~t~L~~A~~~~-----------  259 (596)
                       ..|.  .+++++|+++|++++..+                            .+..|.||||.|+..+           
T Consensus       339 ~~~g~~~~~~v~~Ll~~GAdvn~~~~~g~~~~~~~~~~~i~~LL~~~ga~~~~~~~~G~TpL~~a~~~~~~~~~~~~~~~  418 (661)
T PHA02917        339 MTFGDIDIPLVECMLEYGAVVNKEAIHGYFRNINIDSYTMKYLLKKEGGDAVNHLDDGEIPIGHLCKSNYGCYNFYTYTY  418 (661)
T ss_pred             HHcCCCcHHHHHHHHHcCCCCCCCCccccchhhcCCHHHHHHHHHhcCCCccccCCCCCChhHHHHHhcccchhhhhhhh
Confidence             2333  447788888887766421                            1234889998887432           


Q ss_pred             ------------cHHHHHHHHHCCCCCCCCCCCCChHHHHHHhcCcHHHHHHHHHCCCCcccCCCCCCCHHHHHHH-cCC
Q psy904          260 ------------HCRFVELLLSKGAQVEVKNKKGNSPLWLAANGGHLSVVELLCKHGADIDSQDNRKVSCLMAAFR-KGH  326 (596)
Q Consensus       260 ------------~~~iv~~Ll~~g~di~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~~~~g~t~L~~A~~-~g~  326 (596)
                                  ..+++++|+++|+|++.+|..|.||||+|+..++.+++++|+++|++++..+..|.|||++|+. .++
T Consensus       419 ~~~~~~~~~~~~~~~~v~~Ll~~GAdIN~kd~~G~TpLh~Aa~~~~~~~v~~Ll~~GAdin~~d~~G~T~L~~A~~~~~~  498 (661)
T PHA02917        419 KKGLCDMSYACPILSTINICLPYLKDINMIDKRGETLLHKAVRYNKQSLVSLLLESGSDVNIRSNNGYTCIAIAINESRN  498 (661)
T ss_pred             hhccchhhhhhhhHHHHHHHHHCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHhCCC
Confidence                        3567789999999999999999999999998889999999999999999999999999999985 678


Q ss_pred             HHHHHHHHhCcCCCC
Q psy904          327 VKAVRWMVNHVAQFP  341 (596)
Q Consensus       327 ~~iv~~Ll~~~~~~~  341 (596)
                      .+++++|+.+|+++.
T Consensus       499 ~~iv~~LL~~ga~i~  513 (661)
T PHA02917        499 IELLKMLLCHKPTLD  513 (661)
T ss_pred             HHHHHHHHHcCCChh
Confidence            899999999888765


No 8  
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=100.00  E-value=8e-43  Score=378.35  Aligned_cols=316  Identities=17%  Similarity=0.182  Sum_probs=226.5

Q ss_pred             hcCcHHHHHHHHHCC-CCcccc-CCCCCcHHHHHHH--cCCHHHHHHHHhCCCCccccccCCCChHHHHHHHCCc--HHH
Q psy904           20 AGGHEELVELLLSRG-ADIEHR-DKKGFTPLILAAT--AGHDKVVDILLNHKADMEAQSERTKDTPLSLACSGGR--YEV   93 (596)
Q Consensus        20 ~~g~~~ivk~Ll~~g-~~i~~~-d~~g~t~L~~A~~--~g~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~~~g~--~ei   93 (596)
                      ..+++++|++|++.| +++|.. |..|.||||+|+.  +++.+++++|+++|++++.. +..|.||||+|+..|+  .++
T Consensus       151 ~~v~leiVk~LLe~G~ADIN~~~d~~G~TpLH~A~~n~~~~~eIVklLLe~GADVN~k-D~~G~TPLH~Aa~~g~~~~eI  229 (764)
T PHA02716        151 RGIDLDLIKYMVDVGIVNLNYVCKKTGYGILHAYLGNMYVDIDILEWLCNNGVNVNLQ-NNHLITPLHTYLITGNVCASV  229 (764)
T ss_pred             cCCCHHHHHHHHHCCCCCcccccCCCCCcHHHHHHHhccCCHHHHHHHHHcCCCCCCC-CCCCCCHHHHHHHcCCCCHHH
Confidence            457788888888888 888877 7778888887754  35678888888888887764 4568888888888774  478


Q ss_pred             HHHHHhCCCCccCCCCCCCcHHHHHH---hcCCHHHHHHHHhCCCCccccCCCCCCCcHH---HHHHHcCCHHHHHHHHh
Q psy904           94 VELLLTRGANKEHRNVSDYTPLSLAA---SGGYVNIIKLLLTHGAEINSRTGSKLGISPL---MLAAMNGHTAAVKLLLD  167 (596)
Q Consensus        94 vk~LL~~g~~~~~~d~~g~t~L~~A~---~~g~~eiv~~Ll~~g~~~~~~~~~~~g~t~L---~~A~~~g~~eiv~~Ll~  167 (596)
                      |++|+++|++++..+..|.||||+|+   .+++.++++.|++.+.......    ..++|   ..|+..|+.+++++|++
T Consensus       230 VklLLe~GADVN~kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~----~~~~L~~~i~AA~~g~leiVklLLe  305 (764)
T PHA02716        230 IKKIIELGGDMDMKCVNGMSPIMTYIINIDNINPEITNIYIESLDGNKVKN----IPMILHSYITLARNIDISVVYSFLQ  305 (764)
T ss_pred             HHHHHHcCCCCCCCCCCCCCHHHHHHHhhhccCHHHHHHHHHhcccccccc----chhhhHHHHHHHHcCCHHHHHHHHh
Confidence            88888888888888888888888764   3556677777766532211110    11122   23566677777777777


Q ss_pred             cCCCcccccccCCCcHHHHHHH--cCCHHHHHHHHhcCCCcccccCCCChHHHHHHh--------------cCcHHHHHH
Q psy904          168 MGSDINAQIETNRNTALTLACF--QGRHEVVSLLLDRKANVEHRAKTGLTPLMEAAS--------------GGYVEVGRV  231 (596)
Q Consensus       168 ~~~~~~~~~~~~~~t~L~~A~~--~~~~~ii~~Ll~~g~~~~~~~~~g~t~L~~A~~--------------~g~~~iv~~  231 (596)
                      .|++++.. +..|.||||+|+.  .++.+++++|++.|++++..|..|.||||+|+.              .++.+++++
T Consensus       306 ~GAdIN~k-D~~G~TPLH~Aaa~~~~~~eIVklLLe~GADIN~kD~~G~TPLH~A~~~lav~~~ld~~~~~~~~~eVVkl  384 (764)
T PHA02716        306 PGVKLHYK-DSAGRTCLHQYILRHNISTDIIKLLHEYGNDLNEPDNIGNTVLHTYLSMLSVVNILDPETDNDIRLDVIQC  384 (764)
T ss_pred             CCCceecc-CCCCCCHHHHHHHHhCCCchHHHHHHHcCCCCccCCCCCCCHHHHHHHhhhhhccccccccccChHHHHHH
Confidence            77766654 5566677776553  345677777777777777777777777776653              256677777


Q ss_pred             HHhCCCCCCCCCCCCCCCcHHHHH----HHcCcHHHHHHHHHCC------------------------------------
Q psy904          232 LLDKGADVNAPPVPSSRDTALTIA----ADKGHCRFVELLLSKG------------------------------------  271 (596)
Q Consensus       232 Ll~~g~~~~~~~~~~~g~t~L~~A----~~~~~~~iv~~Ll~~g------------------------------------  271 (596)
                      |+++|++++.  .+..|.||||.+    ...++.+++++|++.|                                    
T Consensus       385 LL~~GADIn~--kn~~G~TPLh~y~~~a~n~~~~dIvklLis~~~~~~~~~~~~q~ll~~~d~~~~~lhh~~a~~~~~~~  462 (764)
T PHA02716        385 LISLGADITA--VNCLGYTPLTSYICTAQNYMYYDIIDCLISDKVLNMVKHRILQDLLIRVDDTPCIIHHIIAKYNIPTD  462 (764)
T ss_pred             HHHCCCCCCC--cCCCCCChHHHHHHHHHhcChHHHHHHHHhCcchhhhhhhhhhhhhhccCcchhhHHHHHHhcCcchh
Confidence            7777776665  446677777632    2234556666665543                                    


Q ss_pred             -------------------------CCCCCCCCCCChHHHHHHhcCcH-----HHHHHHHHCCCCcccCCCCCCCHHHHH
Q psy904          272 -------------------------AQVEVKNKKGNSPLWLAANGGHL-----SVVELLCKHGADIDSQDNRKVSCLMAA  321 (596)
Q Consensus       272 -------------------------~di~~~d~~g~TpL~~A~~~g~~-----~iv~~Ll~~gad~~~~~~~g~t~L~~A  321 (596)
                                               .+++..|..|+||||+|+..|+.     +++++|++.|++++.+|..|.||||+|
T Consensus       463 ~~~~~~~~~~~~~~~~v~~~~ii~~~nvN~~D~~G~TPLh~Aa~~g~~~~v~~e~~k~LL~~GADIN~~d~~G~TPLh~A  542 (764)
T PHA02716        463 LYTDEYEPYDSTKIHDVYHCAIIERYNNAVCETSGMTPLHVSIISHTNANIVMDSFVYLLSIQYNINIPTKNGVTPLMLT  542 (764)
T ss_pred             hhhhhhhhccccccchhhHHHHHhhccccccCCCCCCHHHHHHHcCCccchhHHHHHHHHhCCCCCcccCCCCCCHHHHH
Confidence                                     34456678899999999999876     556999999999999999999999999


Q ss_pred             HHcCCH-----HHHHHHHhCcCCCCCc
Q psy904          322 FRKGHV-----KAVRWMVNHVAQFPSD  343 (596)
Q Consensus       322 ~~~g~~-----~iv~~Ll~~~~~~~~~  343 (596)
                      +.+|+.     ++|++|+++|+++..-
T Consensus       543 ~~~g~~~~~~~eIvk~LL~~ga~~~~~  569 (764)
T PHA02716        543 MRNNRLSGHQWYIVKNILDKRPNVDIV  569 (764)
T ss_pred             HHcCCccccHHHHHHHHHhcCCCcchH
Confidence            999977     9999999999986654


No 9  
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=100.00  E-value=1.9e-41  Score=367.61  Aligned_cols=327  Identities=17%  Similarity=0.189  Sum_probs=254.6

Q ss_pred             CCCCCccCCCCCcHHHHHHh--cCcHHHHHHHHHCCCCccccCCCCCcHHHHHHHcCC--HHHHHHHHhCCCCccccccC
Q psy904            1 MDVDSETESNHDTALTLACA--GGHEELVELLLSRGADIEHRDKKGFTPLILAATAGH--DKVVDILLNHKADMEAQSER   76 (596)
Q Consensus         1 ~di~~~~d~~g~t~L~~A~~--~g~~~ivk~Ll~~g~~i~~~d~~g~t~L~~A~~~g~--~eiv~~Ll~~~~~~~~~~~~   76 (596)
                      +|||...+..|.||||+|+.  +|+.++|++|+++|++++..|..|.||||+|+..|+  .++|++|+++|++++.. +.
T Consensus       167 ADIN~~~d~~G~TpLH~A~~n~~~~~eIVklLLe~GADVN~kD~~G~TPLH~Aa~~g~~~~eIVklLLe~GADVN~k-D~  245 (764)
T PHA02716        167 VNLNYVCKKTGYGILHAYLGNMYVDIDILEWLCNNGVNVNLQNNHLITPLHTYLITGNVCASVIKKIIELGGDMDMK-CV  245 (764)
T ss_pred             CCcccccCCCCCcHHHHHHHhccCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCCCC-CC
Confidence            36777778899999999864  568999999999999999999999999999999995  49999999999999875 56


Q ss_pred             CCChHHHHHH---HCCcHHHHHHHHhCCCCccCCCCCCCcHHH---HHHhcCCHHHHHHHHhCCCCccccCCCCCCCcHH
Q psy904           77 TKDTPLSLAC---SGGRYEVVELLLTRGANKEHRNVSDYTPLS---LAASGGYVNIIKLLLTHGAEINSRTGSKLGISPL  150 (596)
Q Consensus        77 ~~~t~L~~A~---~~g~~eivk~LL~~g~~~~~~d~~g~t~L~---~A~~~g~~eiv~~Ll~~g~~~~~~~~~~~g~t~L  150 (596)
                      .|.||||+|+   ..++.++++.|++.+......  ...++++   .|+..|+.+++++|++.|++++..+.  .|.|||
T Consensus       246 ~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~--~~~~~L~~~i~AA~~g~leiVklLLe~GAdIN~kD~--~G~TPL  321 (764)
T PHA02716        246 NGMSPIMTYIINIDNINPEITNIYIESLDGNKVK--NIPMILHSYITLARNIDISVVYSFLQPGVKLHYKDS--AGRTCL  321 (764)
T ss_pred             CCCCHHHHHHHhhhccCHHHHHHHHHhccccccc--cchhhhHHHHHHHHcCCHHHHHHHHhCCCceeccCC--CCCCHH
Confidence            8999999875   456777888777753221111  1112232   36677788888888888777766543  377888


Q ss_pred             HHHHH--cCCHHHHHHHHhcCCCcccccccCCCcHHHHHHH--------------cCCHHHHHHHHhcCCCcccccCCCC
Q psy904          151 MLAAM--NGHTAAVKLLLDMGSDINAQIETNRNTALTLACF--------------QGRHEVVSLLLDRKANVEHRAKTGL  214 (596)
Q Consensus       151 ~~A~~--~g~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~~--------------~~~~~ii~~Ll~~g~~~~~~~~~g~  214 (596)
                      |+|+.  +++.+++++|++.|++++.. +..|.||||+|+.              .++.+++++|+++|++++..+..|.
T Consensus       322 H~Aaa~~~~~~eIVklLLe~GADIN~k-D~~G~TPLH~A~~~lav~~~ld~~~~~~~~~eVVklLL~~GADIn~kn~~G~  400 (764)
T PHA02716        322 HQYILRHNISTDIIKLLHEYGNDLNEP-DNIGNTVLHTYLSMLSVVNILDPETDNDIRLDVIQCLISLGADITAVNCLGY  400 (764)
T ss_pred             HHHHHHhCCCchHHHHHHHcCCCCccC-CCCCCCHHHHHHHhhhhhccccccccccChHHHHHHHHHCCCCCCCcCCCCC
Confidence            87653  45677888888888877765 5677788887654              2567788888888888887788888


Q ss_pred             hHHHH----HHhcCcHHHHHHHHhCCCCC---------------------------------------------------
Q psy904          215 TPLME----AASGGYVEVGRVLLDKGADV---------------------------------------------------  239 (596)
Q Consensus       215 t~L~~----A~~~g~~~iv~~Ll~~g~~~---------------------------------------------------  239 (596)
                      ||||.    |...++.+++++|++.|+..                                                   
T Consensus       401 TPLh~y~~~a~n~~~~dIvklLis~~~~~~~~~~~~q~ll~~~d~~~~~lhh~~a~~~~~~~~~~~~~~~~~~~~~~~v~  480 (764)
T PHA02716        401 TPLTSYICTAQNYMYYDIIDCLISDKVLNMVKHRILQDLLIRVDDTPCIIHHIIAKYNIPTDLYTDEYEPYDSTKIHDVY  480 (764)
T ss_pred             ChHHHHHHHHHhcChHHHHHHHHhCcchhhhhhhhhhhhhhccCcchhhHHHHHHhcCcchhhhhhhhhhccccccchhh
Confidence            88873    22345677777777654310                                                   


Q ss_pred             --------CCCCCCCCCCcHHHHHHHcCcH-----HHHHHHHHCCCCCCCCCCCCChHHHHHHhcCcH-----HHHHHHH
Q psy904          240 --------NAPPVPSSRDTALTIAADKGHC-----RFVELLLSKGAQVEVKNKKGNSPLWLAANGGHL-----SVVELLC  301 (596)
Q Consensus       240 --------~~~~~~~~g~t~L~~A~~~~~~-----~iv~~Ll~~g~di~~~d~~g~TpL~~A~~~g~~-----~iv~~Ll  301 (596)
                              +....+..|.||||+|+..|+.     +++++|+++|+|+|.+|..|.||||+|+..|+.     ++|++||
T Consensus       481 ~~~ii~~~nvN~~D~~G~TPLh~Aa~~g~~~~v~~e~~k~LL~~GADIN~~d~~G~TPLh~A~~~g~~~~~~~eIvk~LL  560 (764)
T PHA02716        481 HCAIIERYNNAVCETSGMTPLHVSIISHTNANIVMDSFVYLLSIQYNINIPTKNGVTPLMLTMRNNRLSGHQWYIVKNIL  560 (764)
T ss_pred             HHHHHhhccccccCCCCCCHHHHHHHcCCccchhHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCccccHHHHHHHHH
Confidence                    0111356799999999999876     456999999999999999999999999999976     9999999


Q ss_pred             HCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHhCcCC
Q psy904          302 KHGADIDSQDNRKVSCLMAAFRKGHVKAVRWMVNHVAQ  339 (596)
Q Consensus       302 ~~gad~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~  339 (596)
                      ++|++++..      .|++|...++.+++.+|..+++.
T Consensus       561 ~~ga~~~~~------~l~~~~~~~~~~~~~ll~~~~~~  592 (764)
T PHA02716        561 DKRPNVDIV------IIFLDKCYANGKFPSLLLSEDDI  592 (764)
T ss_pred             hcCCCcchH------HHHHHhhhhhhHHHHHHHHcchh
Confidence            999998876      48999999999999999999875


No 10 
>PHA02946 ankyin-like protein; Provisional
Probab=100.00  E-value=1.2e-41  Score=359.35  Aligned_cols=288  Identities=18%  Similarity=0.227  Sum_probs=256.3

Q ss_pred             CCCCccCCCCCcHHHHHHhcCcHHHHHHHHHCCCCccccCCCCCcHHHHHHHcC--CHHHHHHHHhCCCCccccccCCCC
Q psy904            2 DVDSETESNHDTALTLACAGGHEELVELLLSRGADIEHRDKKGFTPLILAATAG--HDKVVDILLNHKADMEAQSERTKD   79 (596)
Q Consensus         2 di~~~~d~~g~t~L~~A~~~g~~~ivk~Ll~~g~~i~~~d~~g~t~L~~A~~~g--~~eiv~~Ll~~~~~~~~~~~~~~~   79 (596)
                      |+|. .+.+|.||||+||..|+.++|++|+++|++++..|..|.||||+|+..+  ..+++++|+++|++++...+..|.
T Consensus        64 dvn~-~d~~G~TpLh~Aa~~g~~eiv~lLL~~GAdin~~d~~g~TpLh~A~~~~~~~~e~v~lLl~~Gadin~~~d~~g~  142 (446)
T PHA02946         64 SPNE-TDDDGNYPLHIASKINNNRIVAMLLTHGADPNACDKQHKTPLYYLSGTDDEVIERINLLVQYGAKINNSVDEEGC  142 (446)
T ss_pred             CCCc-cCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCcccccCCCCC
Confidence            4554 5678999999999999999999999999999999999999999999876  489999999999999877778899


Q ss_pred             hHHHHHHHCCcHHHHHHHHhCCCCccCCCCCCCcHHHHHHhcC--CHHHHHHHHhCCCCccccCCCCCCCcHHHHHHHcC
Q psy904           80 TPLSLACSGGRYEVVELLLTRGANKEHRNVSDYTPLSLAASGG--YVNIIKLLLTHGAEINSRTGSKLGISPLMLAAMNG  157 (596)
Q Consensus        80 t~L~~A~~~g~~eivk~LL~~g~~~~~~d~~g~t~L~~A~~~g--~~eiv~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~g  157 (596)
                      |||| |+..|+.+++++|++.|++++..|..|.||||+|+..+  +.+++++|++.|++++..+.+  |.||||+|+..|
T Consensus       143 tpL~-aa~~~~~~vv~~Ll~~gad~~~~d~~G~t~Lh~A~~~~~~~~~~v~~Ll~~Gadin~~d~~--G~TpLH~Aa~~~  219 (446)
T PHA02946        143 GPLL-ACTDPSERVFKKIMSIGFEARIVDKFGKNHIHRHLMSDNPKASTISWMMKLGISPSKPDHD--GNTPLHIVCSKT  219 (446)
T ss_pred             cHHH-HHHCCChHHHHHHHhccccccccCCCCCCHHHHHHHhcCCCHHHHHHHHHcCCCCcccCCC--CCCHHHHHHHcC
Confidence            9997 66779999999999999999999999999999998755  468999999999999876644  999999999986


Q ss_pred             --CHHHHHHHHhcCCCcccccccCCCcHHHHHHHcCC-HHHHHHHHhcCCCccc--------------------c-cCCC
Q psy904          158 --HTAAVKLLLDMGSDINAQIETNRNTALTLACFQGR-HEVVSLLLDRKANVEH--------------------R-AKTG  213 (596)
Q Consensus       158 --~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~-~~ii~~Ll~~g~~~~~--------------------~-~~~g  213 (596)
                        +.+++++|+. |++++.. +..|.||||+|+..++ .+++++|+..|..++.                    . ...|
T Consensus       220 ~~~~~iv~lLl~-gadin~~-d~~G~TpLh~A~~~~~~~~~~~~Ll~~g~~~~~~~~~~a~~~~~~~~~e~l~~~g~~~~  297 (446)
T PHA02946        220 VKNVDIINLLLP-STDVNKQ-NKFGDSPLTLLIKTLSPAHLINKLLSTSNVITDQTVNICIFYDRDDVLEIINDKGKQYD  297 (446)
T ss_pred             CCcHHHHHHHHc-CCCCCCC-CCCCCCHHHHHHHhCChHHHHHHHHhCCCCCCCcHHHHHHHcCchHHHHHHHHcCcccC
Confidence              8899999985 8898876 7789999999999988 4899999998765321                    1 1347


Q ss_pred             ChHHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCChHHHHHHhcCc
Q psy904          214 LTPLMEAASGGYVEVGRVLLDKGADVNAPPVPSSRDTALTIAADKGHCRFVELLLSKGAQVEVKNKKGNSPLWLAANGGH  293 (596)
Q Consensus       214 ~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~g~di~~~d~~g~TpL~~A~~~g~  293 (596)
                      .||||+|+..|+.+++++|+++|+         .|.||||+|+..++.+++++|+.+|++++.. ..|.||||+|+..++
T Consensus       298 ~TpLh~Aa~~g~~eivk~Ll~~~~---------~~~t~L~~A~~~~~~~~v~~Ll~~ga~~n~~-~~G~t~l~~a~~~~~  367 (446)
T PHA02946        298 STDFKMAVEVGSIRCVKYLLDNDI---------ICEDAMYYAVLSEYETMVDYLLFNHFSVDSV-VNGHTCMSECVRLNN  367 (446)
T ss_pred             CCHHHHHHHcCCHHHHHHHHHCCC---------ccccHHHHHHHhCHHHHHHHHHHCCCCCCCc-cccccHHHHHHHcCC
Confidence            799999999999999999999874         4679999999999999999999999999986 589999999999999


Q ss_pred             HHHHHHHHHCCC
Q psy904          294 LSVVELLCKHGA  305 (596)
Q Consensus       294 ~~iv~~Ll~~ga  305 (596)
                      .++++.|+.+..
T Consensus       368 ~~~~~~ll~~~~  379 (446)
T PHA02946        368 PVILSKLMLHNP  379 (446)
T ss_pred             HHHHHHHHhcCc
Confidence            999999999643


No 11 
>PHA03095 ankyrin-like protein; Provisional
Probab=100.00  E-value=7.1e-42  Score=368.71  Aligned_cols=290  Identities=27%  Similarity=0.338  Sum_probs=266.5

Q ss_pred             HHHHhcCcHHHHHHHHHCCCCccccCCCCCcHHHHHHHcC---CHHHHHHHHhCCCCccccccCCCChHHHHHHHCC-cH
Q psy904           16 TLACAGGHEELVELLLSRGADIEHRDKKGFTPLILAATAG---HDKVVDILLNHKADMEAQSERTKDTPLSLACSGG-RY   91 (596)
Q Consensus        16 ~~A~~~g~~~ivk~Ll~~g~~i~~~d~~g~t~L~~A~~~g---~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~~~g-~~   91 (596)
                      ..++..+++++|++|++.|++++..+..|.||||+|+..|   +.+++++|+++|++++... ..|.||||+|+..| +.
T Consensus        19 ~~~~~~~~~~~v~~Ll~~ga~vn~~~~~g~t~Lh~a~~~~~~~~~~iv~~Ll~~Gadin~~~-~~g~TpLh~A~~~~~~~   97 (471)
T PHA03095         19 LLNASNVTVEEVRRLLAAGADVNFRGEYGKTPLHLYLHYSSEKVKDIVRLLLEAGADVNAPE-RCGFTPLHLYLYNATTL   97 (471)
T ss_pred             HHcCCCCCHHHHHHHHHcCCCcccCCCCCCCHHHHHHHhcCCChHHHHHHHHHCCCCCCCCC-CCCCCHHHHHHHcCCcH
Confidence            4567789999999999999999999999999999999999   9999999999999998764 48999999999999 59


Q ss_pred             HHHHHHHhCCCCccCCCCCCCcHHHHHH--hcCCHHHHHHHHhCCCCccccCCCCCCCcHHHHHHHcC--CHHHHHHHHh
Q psy904           92 EVVELLLTRGANKEHRNVSDYTPLSLAA--SGGYVNIIKLLLTHGAEINSRTGSKLGISPLMLAAMNG--HTAAVKLLLD  167 (596)
Q Consensus        92 eivk~LL~~g~~~~~~d~~g~t~L~~A~--~~g~~eiv~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~g--~~eiv~~Ll~  167 (596)
                      +++++|+++|++++..+..|.||||+|+  ..++.+++++|++.|++++....  .|.||||+|+..+  +.+++++|++
T Consensus        98 ~iv~lLl~~ga~in~~~~~g~tpLh~a~~~~~~~~~iv~~Ll~~gad~~~~d~--~g~tpL~~a~~~~~~~~~iv~~Ll~  175 (471)
T PHA03095         98 DVIKLLIKAGADVNAKDKVGRTPLHVYLSGFNINPKVIRLLLRKGADVNALDL--YGMTPLAVLLKSRNANVELLRLLID  175 (471)
T ss_pred             HHHHHHHHcCCCCCCCCCCCCCHHHHHhhCCcCCHHHHHHHHHcCCCCCccCC--CCCCHHHHHHHcCCCCHHHHHHHHH
Confidence            9999999999999999999999999999  56688999999999999887654  4899999998876  6899999999


Q ss_pred             cCCCcccccccCCCcHHHHHHHc--CCHHHHHHHHhcCCCcccccCCCChHHHHHHhcCcH--HHHHHHHhCCCCCCCCC
Q psy904          168 MGSDINAQIETNRNTALTLACFQ--GRHEVVSLLLDRKANVEHRAKTGLTPLMEAASGGYV--EVGRVLLDKGADVNAPP  243 (596)
Q Consensus       168 ~~~~~~~~~~~~~~t~L~~A~~~--~~~~ii~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~--~iv~~Ll~~g~~~~~~~  243 (596)
                      .|++++.. +..|.||||.++..  ++..+++.|++.|++++..+..|.||||+|+..|+.  .++..|+..|++++.  
T Consensus       176 ~g~~~~~~-d~~g~t~Lh~~~~~~~~~~~i~~~Ll~~g~~~~~~d~~g~tpLh~Aa~~~~~~~~~v~~ll~~g~din~--  252 (471)
T PHA03095        176 AGADVYAV-DDRFRSLLHHHLQSFKPRARIVRELIRAGCDPAATDMLGNTPLHSMATGSSCKRSLVLPLLIAGISINA--  252 (471)
T ss_pred             cCCCCccc-CCCCCCHHHHHHHHCCCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCchHHHHHHHHHcCCCCCC--
Confidence            99999887 88899999999875  788999999999999999999999999999999875  578889999999988  


Q ss_pred             CCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCChHHHHHHhcCcHHHHHHHHHCCCCcccCC
Q psy904          244 VPSSRDTALTIAADKGHCRFVELLLSKGAQVEVKNKKGNSPLWLAANGGHLSVVELLCKHGADIDSQD  311 (596)
Q Consensus       244 ~~~~g~t~L~~A~~~~~~~iv~~Ll~~g~di~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~~  311 (596)
                      .+..|.||||+|+..|+.+++++|+++|+|++..|..|.||||+|+..|+.+++++|+..|++++...
T Consensus       253 ~d~~g~TpLh~A~~~~~~~~v~~LL~~gad~n~~~~~g~tpl~~A~~~~~~~~v~~LL~~~~~~~~~~  320 (471)
T PHA03095        253 RNRYGQTPLHYAAVFNNPRACRRLIALGADINAVSSDGNTPLSLMVRNNNGRAVRAALAKNPSAETVA  320 (471)
T ss_pred             cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCCHHHHHHHHHhCCCHHHHH
Confidence            55789999999999999999999999999999999999999999999999999999999999886543


No 12 
>KOG0510|consensus
Probab=100.00  E-value=1.8e-42  Score=358.90  Aligned_cols=311  Identities=30%  Similarity=0.383  Sum_probs=226.3

Q ss_pred             ccCCCCCcHHHHHHhcCcHHHHHHHHHCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccccCCCChHHHHH
Q psy904            6 ETESNHDTALTLACAGGHEELVELLLSRGADIEHRDKKGFTPLILAATAGHDKVVDILLNHKADMEAQSERTKDTPLSLA   85 (596)
Q Consensus         6 ~~d~~g~t~L~~A~~~g~~~ivk~Ll~~g~~i~~~d~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A   85 (596)
                      ..|+.++|+||+|+.....+.|++|++.|++++..+..+.+|+|+|+..|+..+++.|++.|.+++.. +..+.||||.|
T Consensus        83 a~D~~~n~~l~~a~~~~~~~~i~~Lls~gad~~~~n~~~~aplh~A~~~~~~s~L~~Ll~~~~dvnl~-de~~~TpLh~A  161 (929)
T KOG0510|consen   83 AKDSADNTPLHAAVEYNQGDKIQVLLSYGADTPLRNLNKNAPLHLAADSGNYSCLKLLLDYGADVNLE-DENGFTPLHLA  161 (929)
T ss_pred             hhhcccCchhHHHhhcchHHHHHHHHhcCCCCChhhhhccCchhhccccchHHHHHHHHHhcCCcccc-ccCCCchhhHH
Confidence            34667777888888888888888888888877777777778888888888888888888877776654 45677788888


Q ss_pred             HHCCcHHHHHHHHhCCCCccCCCCCCCcHHHHHHhcCCHHHHHHHHh-----CCCCccccCCCCCCCcHHHHHHHcCCHH
Q psy904           86 CSGGRYEVVELLLTRGANKEHRNVSDYTPLSLAASGGYVNIIKLLLT-----HGAEINSRTGSKLGISPLMLAAMNGHTA  160 (596)
Q Consensus        86 ~~~g~~eivk~LL~~g~~~~~~d~~g~t~L~~A~~~g~~eiv~~Ll~-----~g~~~~~~~~~~~g~t~L~~A~~~g~~e  160 (596)
                      |..++.++.+.|++.|+++...|.+|.+|+|.|+.+|..++++.++.     .+..++.....  +.+|||.|+..|+++
T Consensus       162 ~~~~~~E~~k~Li~~~a~~~K~~~~~~~~iH~aa~s~s~e~mEi~l~~~g~~r~~~in~~~n~--~~~pLhlAve~g~~e  239 (929)
T KOG0510|consen  162 ARKNKVEAKKELINKGADPCKSDIDGNFPIHEAARSGSKECMEIFLPEHGYERQTHINFDNNE--KATPLHLAVEGGDIE  239 (929)
T ss_pred             HhcChHHHHHHHHhcCCCCCcccCcCCchHHHHHHhcchhhhhhhhccccchhhcccccccCC--CCcchhhhhhcCCHH
Confidence            88777777777777787777777777788888888888877777776     44445544433  677788888888888


Q ss_pred             HHHHHHhcCCCcccc--------------cccCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccCCCChHHHHHHhcCcH
Q psy904          161 AVKLLLDMGSDINAQ--------------IETNRNTALTLACFQGRHEVVSLLLDRKANVEHRAKTGLTPLMEAASGGYV  226 (596)
Q Consensus       161 iv~~Ll~~~~~~~~~--------------~~~~~~t~L~~A~~~~~~~ii~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~  226 (596)
                      +++.+++.|......              .|.+|.||||+|+..|+++.++.|+..|++++.++.++.||||.|+..|++
T Consensus       240 ~lk~~L~n~~~~a~~~~~~~~q~kelv~~~d~dg~tpLH~a~r~G~~~svd~Ll~~Ga~I~~kn~d~~spLH~AA~yg~~  319 (929)
T KOG0510|consen  240 MLKMCLQNGKKIADVQLDAMQQEKELVNDEDNDGCTPLHYAARQGGPESVDNLLGFGASINSKNKDEESPLHFAAIYGRI  319 (929)
T ss_pred             HHHHHHhCccccchhhhHHHHHHHHHhhcccccCCchHHHHHHcCChhHHHHHHHcCCcccccCCCCCCchHHHHHcccH
Confidence            887777776543211              245667777777777777777777777777777777777777777777777


Q ss_pred             HHHHHHHh-CCCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCC---CCCCCCChHHHHHHhcCcHHHHHHHHH
Q psy904          227 EVGRVLLD-KGADVNAPPVPSSRDTALTIAADKGHCRFVELLLSKGAQVE---VKNKKGNSPLWLAANGGHLSVVELLCK  302 (596)
Q Consensus       227 ~iv~~Ll~-~g~~~~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~g~di~---~~d~~g~TpL~~A~~~g~~~iv~~Ll~  302 (596)
                      +.++.||+ .|.. ..+..+..|.||||+|+..|+..+++.|++.|++..   ..|.+|+||||+|+..|+..+|++|+.
T Consensus       320 ntv~rLL~~~~~r-llne~D~~g~tpLHlaa~~gH~~v~qlLl~~GA~~~~~~e~D~dg~TaLH~Aa~~g~~~av~~Li~  398 (929)
T KOG0510|consen  320 NTVERLLQESDTR-LLNESDLHGMTPLHLAAKSGHDRVVQLLLNKGALFLNMSEADSDGNTALHLAAKYGNTSAVQKLIS  398 (929)
T ss_pred             HHHHHHHhCcCcc-ccccccccCCCchhhhhhcCHHHHHHHHHhcChhhhcccccccCCchhhhHHHHhccHHHHHHHHH
Confidence            77777777 3322 223355677777777777777777777777777665   447777777777777777777777777


Q ss_pred             CCCCcccCCCCCCCHHHH
Q psy904          303 HGADIDSQDNRKVSCLMA  320 (596)
Q Consensus       303 ~gad~~~~~~~g~t~L~~  320 (596)
                      +|+++...|..|.+++++
T Consensus       399 ~Ga~I~~~n~~g~SA~~~  416 (929)
T KOG0510|consen  399 HGADIGVKNKKGKSAFDT  416 (929)
T ss_pred             cCCceeeccccccccccc
Confidence            777777777777777664


No 13 
>PHA02874 ankyrin repeat protein; Provisional
Probab=100.00  E-value=8.2e-41  Score=355.51  Aligned_cols=311  Identities=23%  Similarity=0.324  Sum_probs=274.6

Q ss_pred             cCCCCCcHHHHHHhcCcHHHHHHHHHCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccccCCCChHHHHHH
Q psy904            7 TESNHDTALTLACAGGHEELVELLLSRGADIEHRDKKGFTPLILAATAGHDKVVDILLNHKADMEAQSERTKDTPLSLAC   86 (596)
Q Consensus         7 ~d~~g~t~L~~A~~~g~~~ivk~Ll~~g~~i~~~d~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~   86 (596)
                      .+..|.||||.|+..|+.++|++|++.|++++..+..|.||||+|+..|+.+++++|+++|+++...           ++
T Consensus        31 ~~~~~~tpL~~A~~~g~~~iv~~Ll~~Ga~~n~~~~~~~t~L~~A~~~~~~~iv~~Ll~~g~~~~~~-----------~~   99 (434)
T PHA02874         31 SVDETTTPLIDAIRSGDAKIVELFIKHGADINHINTKIPHPLLTAIKIGAHDIIKLLIDNGVDTSIL-----------PI   99 (434)
T ss_pred             cCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcc-----------hh
Confidence            3567899999999999999999999999999999999999999999999999999999999875421           23


Q ss_pred             HCCcHHHHHHHHhCCCCccCCCCCCCcHHHHHHhcCCHHHHHHHHhCCCCccccCCCCCCCcHHHHHHHcCCHHHHHHHH
Q psy904           87 SGGRYEVVELLLTRGANKEHRNVSDYTPLSLAASGGYVNIIKLLLTHGAEINSRTGSKLGISPLMLAAMNGHTAAVKLLL  166 (596)
Q Consensus        87 ~~g~~eivk~LL~~g~~~~~~d~~g~t~L~~A~~~g~~eiv~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~g~~eiv~~Ll  166 (596)
                      ...+.+++++|++.|++++..+..|.||||+|+..|+.+++++|+++|++++....  .|.||||+|+..|+.+++++|+
T Consensus       100 ~~~~~~~i~~ll~~g~d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad~n~~d~--~g~tpLh~A~~~~~~~iv~~Ll  177 (434)
T PHA02874        100 PCIEKDMIKTILDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDD--NGCYPIHIAIKHNFFDIIKLLL  177 (434)
T ss_pred             ccCCHHHHHHHHHCcCCCCCCCCCCccHHHHHHHCCCHHHHHHHHhCCCCCCCcCC--CCCCHHHHHHHCCcHHHHHHHH
Confidence            44678999999999999999999999999999999999999999999999887654  4999999999999999999999


Q ss_pred             hcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccCCCChHHHHHHhcCcHHHHHHHHhCCCCCCCCCCCC
Q psy904          167 DMGSDINAQIETNRNTALTLACFQGRHEVVSLLLDRKANVEHRAKTGLTPLMEAASGGYVEVGRVLLDKGADVNAPPVPS  246 (596)
Q Consensus       167 ~~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~  246 (596)
                      +.|++++.. +..|.||||.|+..|+.+++++|++.|++++..+..|.||||.|+..+. .++.+|+ .|++++.  .+.
T Consensus       178 ~~g~~~n~~-~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~i~~~~~~g~TpL~~A~~~~~-~~i~~Ll-~~~~in~--~d~  252 (434)
T PHA02874        178 EKGAYANVK-DNNGESPLHNAAEYGDYACIKLLIDHGNHIMNKCKNGFTPLHNAIIHNR-SAIELLI-NNASIND--QDI  252 (434)
T ss_pred             HCCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHCCh-HHHHHHH-cCCCCCC--cCC
Confidence            999998876 6788999999999999999999999999999999999999999999765 5666666 5777776  667


Q ss_pred             CCCcHHHHHHHcC-cHHHHHHHHHCCCCCCCCCCCCChHHHHHHhcC-cHHHHHHHHHCCCCcccCCCCC-CCHHHHHHH
Q psy904          247 SRDTALTIAADKG-HCRFVELLLSKGAQVEVKNKKGNSPLWLAANGG-HLSVVELLCKHGADIDSQDNRK-VSCLMAAFR  323 (596)
Q Consensus       247 ~g~t~L~~A~~~~-~~~iv~~Ll~~g~di~~~d~~g~TpL~~A~~~g-~~~iv~~Ll~~gad~~~~~~~g-~t~L~~A~~  323 (596)
                      .|.||||+|+..+ +.+++++|+++|++++.+|..|.||||+|+..+ ...+++.|+..++.++..+..+ .+++..+..
T Consensus       253 ~G~TpLh~A~~~~~~~~iv~~Ll~~gad~n~~d~~g~TpL~~A~~~~~~~~~ik~ll~~~~~~~~~~~~~~~~~~~~~~i  332 (434)
T PHA02874        253 DGSTPLHHAINPPCDIDIIDILLYHKADISIKDNKGENPIDTAFKYINKDPVIKDIIANAVLIKEADKLKDSDFLEHIEI  332 (434)
T ss_pred             CCCCHHHHHHhcCCcHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHhCCccHHHHHHHHhcCchhhccccchhHHHHHHHH
Confidence            8999999999876 789999999999999999999999999999887 7789999999998876655544 455666666


Q ss_pred             cCCHHHHHHHHh
Q psy904          324 KGHVKAVRWMVN  335 (596)
Q Consensus       324 ~g~~~iv~~Ll~  335 (596)
                      .++..+..++..
T Consensus       333 ~~~~~~~~~~~~  344 (434)
T PHA02874        333 KDNKEFSDFIKE  344 (434)
T ss_pred             hccchHHHHHHH
Confidence            666666555554


No 14 
>PHA02730 ankyrin-like protein; Provisional
Probab=100.00  E-value=9.6e-41  Score=355.31  Aligned_cols=336  Identities=14%  Similarity=0.152  Sum_probs=275.7

Q ss_pred             CCCCccCCCCCcHHHHHHhcC--cHHHHHHHHHCCC--CccccCCCCCcHHHHHHH--cCCHHHHHHHHh-CCCCccccc
Q psy904            2 DVDSETESNHDTALTLACAGG--HEELVELLLSRGA--DIEHRDKKGFTPLILAAT--AGHDKVVDILLN-HKADMEAQS   74 (596)
Q Consensus         2 di~~~~d~~g~t~L~~A~~~g--~~~ivk~Ll~~g~--~i~~~d~~g~t~L~~A~~--~g~~eiv~~Ll~-~~~~~~~~~   74 (596)
                      |++ ..|..|.||||+|+..|  +.++|++|++.|+  +++..+.-+.+||+.++.  +++.++|++|+. .+.+++...
T Consensus        69 din-~kD~~G~TPLh~Aa~~~~~~~eIv~~Ll~~~~~~~~~~~~~~~d~~l~~y~~s~n~~~~~vk~Li~~~~~~~~~~~  147 (672)
T PHA02730         69 ERL-CRNNEGLTPLGVYSKRKYVKSQIVHLLISSYSNASNELTSNINDFDLYSYMSSDNIDLRLLKYLIVDKRIRPSKNT  147 (672)
T ss_pred             CCc-ccCCCCCChHHHHHHcCCCcHHHHHHHHhcCCCCCcccccccCCchHHHHHHhcCCcHHHHHHHHHhcCCChhhhh
Confidence            555 34789999999999976  7999999999965  457777778999999999  889999999996 556665443


Q ss_pred             c----CCCChHHHHHHHCCcHHHHHHHHhCCCCccC-------CCCCCC-cHHHHHH------hcCCHHHHHHHHhCCCC
Q psy904           75 E----RTKDTPLSLACSGGRYEVVELLLTRGANKEH-------RNVSDY-TPLSLAA------SGGYVNIIKLLLTHGAE  136 (596)
Q Consensus        75 ~----~~~~t~L~~A~~~g~~eivk~LL~~g~~~~~-------~d~~g~-t~L~~A~------~~g~~eiv~~Ll~~g~~  136 (596)
                      +    ..|.+|++++...++++||++|+++|++++-       .+.... |.||+++      .+++.+++++|+++|++
T Consensus       148 ~~~~~~~~~~~~yl~~~~~~~eIvklLi~~g~~v~g~~~~~~~~~~~~c~~~l~~~il~~~~~~~n~~eiv~lLIs~Gad  227 (672)
T PHA02730        148 NYYIHCLGLVDIYVTTPNPRPEVLLWLLKSECYSTGYVFRSCMYDSDRCKNSLHYYILSHRESESLSKDVIKCLIDNNVS  227 (672)
T ss_pred             hhhccccchhhhhHhcCCCchHHHHHHHHcCCcccccccccccccCCccchhHHHHHHhhhhhhccCHHHHHHHHHCCCC
Confidence            2    3688999999999999999999999999852       222333 5555333      56789999999999999


Q ss_pred             ccccCCCCCCCcHHHH--HHHcCCHHHHHHHHh--------------------------------cCCCccc--------
Q psy904          137 INSRTGSKLGISPLML--AAMNGHTAAVKLLLD--------------------------------MGSDINA--------  174 (596)
Q Consensus       137 ~~~~~~~~~g~t~L~~--A~~~g~~eiv~~Ll~--------------------------------~~~~~~~--------  174 (596)
                      ++..+.+  |.||||+  +...|+.+++++|+.                                +|++...        
T Consensus       228 IN~kd~~--G~TpLh~~~~~~~~~~eiv~~Li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~  305 (672)
T PHA02730        228 IHGRDEG--GSLPIQYYWSCSTIDIEIVKLLIKDVDTCSVYDDISQPYIRGVLADYLNKRFRVTPYNVDMEIVNLLIEGR  305 (672)
T ss_pred             CCCCCCC--CCCHHHHHHHcCcccHHHHHHHHhccccccccccccchhhhhhHHHhhhhhhhcccCCcchHHHHHHhhcc
Confidence            9888765  9999995  555677999999999                                6766533        


Q ss_pred             -----------ccccCCCc---------------------HHHHHHHcC---CHHHHHHHHhcCCCcccccCCCChHHHH
Q psy904          175 -----------QIETNRNT---------------------ALTLACFQG---RHEVVSLLLDRKANVEHRAKTGLTPLME  219 (596)
Q Consensus       175 -----------~~~~~~~t---------------------~L~~A~~~~---~~~ii~~Ll~~g~~~~~~~~~g~t~L~~  219 (596)
                                 +.+..|.+                     .||.-..++   +.+++++|+++|++++.. ..|.||||+
T Consensus       306 ~~~~~~~~~~~~~~~~~~n~~~~~~i~~~~~~~~~~~~q~~l~~Y~~~~~~v~ieIvelLIs~GAdIN~k-~~G~TpLH~  384 (672)
T PHA02730        306 HTLIDVMRSITSYDSREYNHYIIDNILKRFRQQDESIVQAMLINYLHYGDMVSIPILRCMLDNGATMDKT-TDNNYPLHD  384 (672)
T ss_pred             CcchhhhhccccccccccchhHHHHHHHhhhccchhHHHHHHHHHHhcCCcCcHHHHHHHHHCCCCCCcC-CCCCcHHHH
Confidence                       12333433                     566666655   689999999999999985 789999999


Q ss_pred             HHhcCc----HHHHHHHHhCCCCCCCCCCCCCCCcHHHH---HHHcC---------cHHHHHHHHHCCCCCCCCCCCCCh
Q psy904          220 AASGGY----VEVGRVLLDKGADVNAPPVPSSRDTALTI---AADKG---------HCRFVELLLSKGAQVEVKNKKGNS  283 (596)
Q Consensus       220 A~~~g~----~~iv~~Ll~~g~~~~~~~~~~~g~t~L~~---A~~~~---------~~~iv~~Ll~~g~di~~~d~~g~T  283 (596)
                      |+..++    .+++++|+++|++.+....+..|.||||.   |...+         ..+++++|+++|+|+|.+|..|.|
T Consensus       385 Aa~~nnn~i~~eIvelLIs~Ga~~dIN~kd~~G~T~Lh~~i~a~~~n~~~~~~e~~~~~ivk~LIs~GADINakD~~G~T  464 (672)
T PHA02730        385 YFVNNNNIVDVNVVRFIVENNGHMAINHVSNNGRLCMYGLILSRFNNCGYHCYETILIDVFDILSKYMDDIDMIDNENKT  464 (672)
T ss_pred             HHHHcCCcchHHHHHHHHHcCCCccccccccCCCchHhHHHHHHhccccccccchhHHHHHHHHHhcccchhccCCCCCC
Confidence            988775    89999999999854444466789999984   33332         235799999999999999999999


Q ss_pred             HHHHHHhcCcHHHHHHHHHCCCCcccCCC-CCCCHHHHHHH--cCCHHHHHHHHhCcCCCC
Q psy904          284 PLWLAANGGHLSVVELLCKHGADIDSQDN-RKVSCLMAAFR--KGHVKAVRWMVNHVAQFP  341 (596)
Q Consensus       284 pL~~A~~~g~~~iv~~Ll~~gad~~~~~~-~g~t~L~~A~~--~g~~~iv~~Ll~~~~~~~  341 (596)
                      |||+|+..++.+++++|+.+|++++..+. .|.|||++|+.  .++.+++++|+++|+.+.
T Consensus       465 PLh~Aa~~~~~eive~LI~~GAdIN~~d~~~g~TaL~~Aa~~~~~~~eIv~~LLs~ga~i~  525 (672)
T PHA02730        465 LLYYAVDVNNIQFARRLLEYGASVNTTSRSIINTAIQKSSYRRENKTKLVDLLLSYHPTLE  525 (672)
T ss_pred             HHHHHHHhCCHHHHHHHHHCCCCCCCCCCcCCcCHHHHHHHhhcCcHHHHHHHHHcCCCHH
Confidence            99999999999999999999999999996 69999999987  479999999999999764


No 15 
>KOG0510|consensus
Probab=100.00  E-value=1.1e-41  Score=352.90  Aligned_cols=323  Identities=30%  Similarity=0.365  Sum_probs=292.7

Q ss_pred             CCCCCcHHHHHHhcCcHHHHHHHHHCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccccCCCChHHHHHHH
Q psy904            8 ESNHDTALTLACAGGHEELVELLLSRGADIEHRDKKGFTPLILAATAGHDKVVDILLNHKADMEAQSERTKDTPLSLACS   87 (596)
Q Consensus         8 d~~g~t~L~~A~~~g~~~ivk~Ll~~g~~i~~~d~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~~   87 (596)
                      +..|+|++|.|+..+++      ++.-......|..|.+|||+|+.....+.|++|++.|+++... +..+.+|+|+|+.
T Consensus        58 ~~~gd~~~~~~~~~~y~------~~~~~~~~a~D~~~n~~l~~a~~~~~~~~i~~Lls~gad~~~~-n~~~~aplh~A~~  130 (929)
T KOG0510|consen   58 RAFGDTELHHASARNYI------LSKLAISYAKDSADNTPLHAAVEYNQGDKIQVLLSYGADTPLR-NLNKNAPLHLAAD  130 (929)
T ss_pred             hhhchhHHHHHHhhcch------hhhhhhhhhhhcccCchhHHHhhcchHHHHHHHHhcCCCCChh-hhhccCchhhccc
Confidence            45688999999998877      4444556778889999999999999999999999999998765 5678999999999


Q ss_pred             CCcHHHHHHHHhCCCCccCCCCCCCcHHHHHHhcCCHHHHHHHHhCCCCccccCCCCCCCcHHHHHHHcCCHHHHHHHHh
Q psy904           88 GGRYEVVELLLTRGANKEHRNVSDYTPLSLAASGGYVNIIKLLLTHGAEINSRTGSKLGISPLMLAAMNGHTAAVKLLLD  167 (596)
Q Consensus        88 ~g~~eivk~LL~~g~~~~~~d~~g~t~L~~A~~~g~~eiv~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~g~~eiv~~Ll~  167 (596)
                      .|++.+++.|+++|++++..|..+.||||+|+..++.+..+.|+..|+++.-.+.+  |.+|+|.|+.+|..++.+.++.
T Consensus       131 ~~~~s~L~~Ll~~~~dvnl~de~~~TpLh~A~~~~~~E~~k~Li~~~a~~~K~~~~--~~~~iH~aa~s~s~e~mEi~l~  208 (929)
T KOG0510|consen  131 SGNYSCLKLLLDYGADVNLEDENGFTPLHLAARKNKVEAKKELINKGADPCKSDID--GNFPIHEAARSGSKECMEIFLP  208 (929)
T ss_pred             cchHHHHHHHHHhcCCccccccCCCchhhHHHhcChHHHHHHHHhcCCCCCcccCc--CCchHHHHHHhcchhhhhhhhc
Confidence            99999999999999999999999999999999999999989999999988766654  8999999999999999999998


Q ss_pred             -----cCCCcccccccCCCcHHHHHHHcCCHHHHHHHHhcCCCc---------------ccccCCCChHHHHHHhcCcHH
Q psy904          168 -----MGSDINAQIETNRNTALTLACFQGRHEVVSLLLDRKANV---------------EHRAKTGLTPLMEAASGGYVE  227 (596)
Q Consensus       168 -----~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~g~~~---------------~~~~~~g~t~L~~A~~~g~~~  227 (596)
                           .+..++.. +..+.+|||.|+..|+.++++.+++.|..+               +..|.+|.||||+|++.|+.+
T Consensus       209 ~~g~~r~~~in~~-~n~~~~pLhlAve~g~~e~lk~~L~n~~~~a~~~~~~~~q~kelv~~~d~dg~tpLH~a~r~G~~~  287 (929)
T KOG0510|consen  209 EHGYERQTHINFD-NNEKATPLHLAVEGGDIEMLKMCLQNGKKIADVQLDAMQQEKELVNDEDNDGCTPLHYAARQGGPE  287 (929)
T ss_pred             cccchhhcccccc-cCCCCcchhhhhhcCCHHHHHHHHhCccccchhhhHHHHHHHHHhhcccccCCchHHHHHHcCChh
Confidence                 55666665 677889999999999999999999986542               345788999999999999999


Q ss_pred             HHHHHHhCCCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHH-CC-CCCCCCCCCCChHHHHHHhcCcHHHHHHHHHCCC
Q psy904          228 VGRVLLDKGADVNAPPVPSSRDTALTIAADKGHCRFVELLLS-KG-AQVEVKNKKGNSPLWLAANGGHLSVVELLCKHGA  305 (596)
Q Consensus       228 iv~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~-~g-~di~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga  305 (596)
                      .+..|+..|++++.  .+.++.||||.|+.+|++..|+-||+ .| ..+|..|..|.||||.|+..||..++++|++.||
T Consensus       288 svd~Ll~~Ga~I~~--kn~d~~spLH~AA~yg~~ntv~rLL~~~~~rllne~D~~g~tpLHlaa~~gH~~v~qlLl~~GA  365 (929)
T KOG0510|consen  288 SVDNLLGFGASINS--KNKDEESPLHFAAIYGRINTVERLLQESDTRLLNESDLHGMTPLHLAAKSGHDRVVQLLLNKGA  365 (929)
T ss_pred             HHHHHHHcCCcccc--cCCCCCCchHHHHHcccHHHHHHHHhCcCccccccccccCCCchhhhhhcCHHHHHHHHHhcCh
Confidence            99999999999998  55889999999999999999999999 54 5678889999999999999999999999999999


Q ss_pred             Ccc---cCCCCCCCHHHHHHHcCCHHHHHHHHhCcCCCCC
Q psy904          306 DID---SQDNRKVSCLMAAFRKGHVKAVRWMVNHVAQFPS  342 (596)
Q Consensus       306 d~~---~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~  342 (596)
                      ...   ..|.+|.||||.|+..|+..+|++|+.+|+++..
T Consensus       366 ~~~~~~e~D~dg~TaLH~Aa~~g~~~av~~Li~~Ga~I~~  405 (929)
T KOG0510|consen  366 LFLNMSEADSDGNTALHLAAKYGNTSAVQKLISHGADIGV  405 (929)
T ss_pred             hhhcccccccCCchhhhHHHHhccHHHHHHHHHcCCceee
Confidence            877   5699999999999999999999999999999855


No 16 
>PHA03095 ankyrin-like protein; Provisional
Probab=100.00  E-value=2e-40  Score=357.49  Aligned_cols=287  Identities=27%  Similarity=0.321  Sum_probs=265.8

Q ss_pred             HHHHHcCCHHHHHHHHhCCCCccccccCCCChHHHHHHHCC---cHHHHHHHHhCCCCccCCCCCCCcHHHHHHhcC-CH
Q psy904           49 ILAATAGHDKVVDILLNHKADMEAQSERTKDTPLSLACSGG---RYEVVELLLTRGANKEHRNVSDYTPLSLAASGG-YV  124 (596)
Q Consensus        49 ~~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~~~g---~~eivk~LL~~g~~~~~~d~~g~t~L~~A~~~g-~~  124 (596)
                      ..++..+++++|++|+++|++++.. +..|.||||+|+..|   +.+++++|++.|++++..+..|.||||+|+..| +.
T Consensus        19 ~~~~~~~~~~~v~~Ll~~ga~vn~~-~~~g~t~Lh~a~~~~~~~~~~iv~~Ll~~Gadin~~~~~g~TpLh~A~~~~~~~   97 (471)
T PHA03095         19 LLNASNVTVEEVRRLLAAGADVNFR-GEYGKTPLHLYLHYSSEKVKDIVRLLLEAGADVNAPERCGFTPLHLYLYNATTL   97 (471)
T ss_pred             HHcCCCCCHHHHHHHHHcCCCcccC-CCCCCCHHHHHHHhcCCChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCcH
Confidence            4567788999999999999998764 667999999999998   999999999999999999999999999999999 59


Q ss_pred             HHHHHHHhCCCCccccCCCCCCCcHHHHHH--HcCCHHHHHHHHhcCCCcccccccCCCcHHHHHHHcC--CHHHHHHHH
Q psy904          125 NIIKLLLTHGAEINSRTGSKLGISPLMLAA--MNGHTAAVKLLLDMGSDINAQIETNRNTALTLACFQG--RHEVVSLLL  200 (596)
Q Consensus       125 eiv~~Ll~~g~~~~~~~~~~~g~t~L~~A~--~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~--~~~ii~~Ll  200 (596)
                      +++++|+++|++++.....  |.||||+|+  ..++.+++++|++.|++++.. +..|.||||+|+..+  +.+++++|+
T Consensus        98 ~iv~lLl~~ga~in~~~~~--g~tpLh~a~~~~~~~~~iv~~Ll~~gad~~~~-d~~g~tpL~~a~~~~~~~~~iv~~Ll  174 (471)
T PHA03095         98 DVIKLLIKAGADVNAKDKV--GRTPLHVYLSGFNINPKVIRLLLRKGADVNAL-DLYGMTPLAVLLKSRNANVELLRLLI  174 (471)
T ss_pred             HHHHHHHHcCCCCCCCCCC--CCCHHHHHhhCCcCCHHHHHHHHHcCCCCCcc-CCCCCCHHHHHHHcCCCCHHHHHHHH
Confidence            9999999999998876644  999999999  567899999999999999876 678899999999876  689999999


Q ss_pred             hcCCCcccccCCCChHHHHHHhc--CcHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHcCcH--HHHHHHHHCCCCCCC
Q psy904          201 DRKANVEHRAKTGLTPLMEAASG--GYVEVGRVLLDKGADVNAPPVPSSRDTALTIAADKGHC--RFVELLLSKGAQVEV  276 (596)
Q Consensus       201 ~~g~~~~~~~~~g~t~L~~A~~~--g~~~iv~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~--~iv~~Ll~~g~di~~  276 (596)
                      +.|++++..+..|.||||+++..  +...++++|++.|++++.  .+..|.||||+|+..|+.  .++..|+..|++++.
T Consensus       175 ~~g~~~~~~d~~g~t~Lh~~~~~~~~~~~i~~~Ll~~g~~~~~--~d~~g~tpLh~Aa~~~~~~~~~v~~ll~~g~din~  252 (471)
T PHA03095        175 DAGADVYAVDDRFRSLLHHHLQSFKPRARIVRELIRAGCDPAA--TDMLGNTPLHSMATGSSCKRSLVLPLLIAGISINA  252 (471)
T ss_pred             HcCCCCcccCCCCCCHHHHHHHHCCCcHHHHHHHHHcCCCCcc--cCCCCCCHHHHHHhcCCchHHHHHHHHHcCCCCCC
Confidence            99999999999999999999864  788999999999999988  668999999999999975  588999999999999


Q ss_pred             CCCCCChHHHHHHhcCcHHHHHHHHHCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHhCcCCCC
Q psy904          277 KNKKGNSPLWLAANGGHLSVVELLCKHGADIDSQDNRKVSCLMAAFRKGHVKAVRWMVNHVAQFP  341 (596)
Q Consensus       277 ~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~  341 (596)
                      +|..|.||||+|+..|+.+++++|+++|++++..+..|.|||++|+..|+.+++++|+.+++++.
T Consensus       253 ~d~~g~TpLh~A~~~~~~~~v~~LL~~gad~n~~~~~g~tpl~~A~~~~~~~~v~~LL~~~~~~~  317 (471)
T PHA03095        253 RNRYGQTPLHYAAVFNNPRACRRLIALGADINAVSSDGNTPLSLMVRNNNGRAVRAALAKNPSAE  317 (471)
T ss_pred             cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCCHHHHHHHHHhCCCHH
Confidence            99999999999999999999999999999999999999999999999999999999999998754


No 17 
>PHA03100 ankyrin repeat protein; Provisional
Probab=100.00  E-value=1.5e-40  Score=359.21  Aligned_cols=282  Identities=30%  Similarity=0.373  Sum_probs=198.4

Q ss_pred             CcHHHHHHHHHCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccccCCCChHHHH-----HHHCCcHHHHHH
Q psy904           22 GHEELVELLLSRGADIEHRDKKGFTPLILAATAGHDKVVDILLNHKADMEAQSERTKDTPLSL-----ACSGGRYEVVEL   96 (596)
Q Consensus        22 g~~~ivk~Ll~~g~~i~~~d~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~-----A~~~g~~eivk~   96 (596)
                      ....++++++..+...+..+..+.||||+|+..|+.++|++|+++|++++.. +..+.||||+     |+..|+.+++++
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~ivk~Ll~~g~~~~~~-~~~~~t~L~~~~~~~a~~~~~~~iv~~   91 (480)
T PHA03100         13 IKVKNIKYIIMEDDLNDYSYKKPVLPLYLAKEARNIDVVKILLDNGADINSS-TKNNSTPLHYLSNIKYNLTDVKEIVKL   91 (480)
T ss_pred             HHHHHHHHHHhcCccchhhhcccchhhhhhhccCCHHHHHHHHHcCCCCCCc-cccCcCHHHHHHHHHHHhhchHHHHHH
Confidence            4457778888777666677777888888888888888888888888877653 4457788888     888888888888


Q ss_pred             HHhCCCCccCCCCCCCcHHHHHH--hcCCHHHHHHHHhCCCCccccCCCCCCCcHHHHHHHcC--CHHHHHHHHhcCCCc
Q psy904           97 LLTRGANKEHRNVSDYTPLSLAA--SGGYVNIIKLLLTHGAEINSRTGSKLGISPLMLAAMNG--HTAAVKLLLDMGSDI  172 (596)
Q Consensus        97 LL~~g~~~~~~d~~g~t~L~~A~--~~g~~eiv~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~g--~~eiv~~Ll~~~~~~  172 (596)
                      |++.|++++..+..|.||||+|+  ..|+.+++++|+++|++++....  .|.||||+|+..|  +.+++++|+++|+++
T Consensus        92 Ll~~ga~i~~~d~~g~tpL~~A~~~~~~~~~iv~~Ll~~g~~~~~~~~--~g~t~L~~A~~~~~~~~~iv~~Ll~~g~di  169 (480)
T PHA03100         92 LLEYGANVNAPDNNGITPLLYAISKKSNSYSIVEYLLDNGANVNIKNS--DGENLLHLYLESNKIDLKILKLLIDKGVDI  169 (480)
T ss_pred             HHHCCCCCCCCCCCCCchhhHHHhcccChHHHHHHHHHcCCCCCccCC--CCCcHHHHHHHcCCChHHHHHHHHHCCCCc
Confidence            88888888888888888888888  88888888888888877765543  3777888888777  777777777777777


Q ss_pred             ccccccCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccCCC------ChHHHHHHhcCc--HHHHHHHHhCCCCCCCCCC
Q psy904          173 NAQIETNRNTALTLACFQGRHEVVSLLLDRKANVEHRAKTG------LTPLMEAASGGY--VEVGRVLLDKGADVNAPPV  244 (596)
Q Consensus       173 ~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~g~~~~~~~~~g------~t~L~~A~~~g~--~~iv~~Ll~~g~~~~~~~~  244 (596)
                      +.. +..|.||||.|+..|+.+++++|+++|++++..+..|      .||||.|+..|+  .+++++|++.|++++.  .
T Consensus       170 n~~-d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll~~g~din~--~  246 (480)
T PHA03100        170 NAK-NRYGYTPLHIAVEKGNIDVIKFLLDNGADINAGDIETLLFTIFETPLHIAACYNEITLEVVNYLLSYGVPINI--K  246 (480)
T ss_pred             ccc-cCCCCCHHHHHHHhCCHHHHHHHHHcCCCccCCCCCCCcHHHHHhHHHHHHHhCcCcHHHHHHHHHcCCCCCC--C
Confidence            665 4467777777777777777777777777777777666      555555555555  5555555555555554  3


Q ss_pred             CCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCChHHHHHHhcCcHHHHHHHHHCCCCccc
Q psy904          245 PSSRDTALTIAADKGHCRFVELLLSKGAQVEVKNKKGNSPLWLAANGGHLSVVELLCKHGADIDS  309 (596)
Q Consensus       245 ~~~g~t~L~~A~~~~~~~iv~~Ll~~g~di~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~  309 (596)
                      +..|.||||+|+..|+.+++++|+++|+|++.+|..|.||||+|+..++.+++++|+++|++++.
T Consensus       247 d~~g~TpL~~A~~~~~~~iv~~Ll~~gad~n~~d~~g~tpl~~A~~~~~~~iv~~Ll~~g~~i~~  311 (480)
T PHA03100        247 DVYGFTPLHYAVYNNNPEFVKYLLDLGANPNLVNKYGDTPLHIAILNNNKEIFKLLLNNGPSIKT  311 (480)
T ss_pred             CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHhCCHHHHHHHHhcCCCHHH
Confidence            34555555555555555555555555555555555555555555555555555555555555543


No 18 
>PHA03100 ankyrin repeat protein; Provisional
Probab=100.00  E-value=3.2e-40  Score=356.62  Aligned_cols=271  Identities=31%  Similarity=0.430  Sum_probs=254.6

Q ss_pred             CCCCccCCCCCcHHHHHHhcCcHHHHHHHHHCCCCccccCCCCCcHHHH-----HHHcCCHHHHHHHHhCCCCccccccC
Q psy904            2 DVDSETESNHDTALTLACAGGHEELVELLLSRGADIEHRDKKGFTPLIL-----AATAGHDKVVDILLNHKADMEAQSER   76 (596)
Q Consensus         2 di~~~~d~~g~t~L~~A~~~g~~~ivk~Ll~~g~~i~~~d~~g~t~L~~-----A~~~g~~eiv~~Ll~~~~~~~~~~~~   76 (596)
                      |++...+..+.||||+|+..|+.++|++|++.|++++..+..|.||||+     |+..|+.+++++|+++|++++ ..+.
T Consensus        26 ~~~~~~~~~~~t~L~~A~~~~~~~ivk~Ll~~g~~~~~~~~~~~t~L~~~~~~~a~~~~~~~iv~~Ll~~ga~i~-~~d~  104 (480)
T PHA03100         26 DLNDYSYKKPVLPLYLAKEARNIDVVKILLDNGADINSSTKNNSTPLHYLSNIKYNLTDVKEIVKLLLEYGANVN-APDN  104 (480)
T ss_pred             ccchhhhcccchhhhhhhccCCHHHHHHHHHcCCCCCCccccCcCHHHHHHHHHHHhhchHHHHHHHHHCCCCCC-CCCC
Confidence            4666778899999999999999999999999999999999999999999     999999999999999999994 4567


Q ss_pred             CCChHHHHHH--HCCcHHHHHHHHhCCCCccCCCCCCCcHHHHHHhcC--CHHHHHHHHhCCCCccccCCCCCCCcHHHH
Q psy904           77 TKDTPLSLAC--SGGRYEVVELLLTRGANKEHRNVSDYTPLSLAASGG--YVNIIKLLLTHGAEINSRTGSKLGISPLML  152 (596)
Q Consensus        77 ~~~t~L~~A~--~~g~~eivk~LL~~g~~~~~~d~~g~t~L~~A~~~g--~~eiv~~Ll~~g~~~~~~~~~~~g~t~L~~  152 (596)
                      .|.||||+|+  ..|+.+++++|+++|++++..+..|.||||+|+..|  +.+++++|+++|++++....  .|.||||+
T Consensus       105 ~g~tpL~~A~~~~~~~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~iv~~Ll~~g~din~~d~--~g~tpL~~  182 (480)
T PHA03100        105 NGITPLLYAISKKSNSYSIVEYLLDNGANVNIKNSDGENLLHLYLESNKIDLKILKLLIDKGVDINAKNR--YGYTPLHI  182 (480)
T ss_pred             CCCchhhHHHhcccChHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCChHHHHHHHHHCCCCcccccC--CCCCHHHH
Confidence            8999999999  999999999999999999999999999999999999  99999999999999887765  59999999


Q ss_pred             HHHcCCHHHHHHHHhcCCCcccccccCC------CcHHHHHHHcCC--HHHHHHHHhcCCCcccccCCCChHHHHHHhcC
Q psy904          153 AAMNGHTAAVKLLLDMGSDINAQIETNR------NTALTLACFQGR--HEVVSLLLDRKANVEHRAKTGLTPLMEAASGG  224 (596)
Q Consensus       153 A~~~g~~eiv~~Ll~~~~~~~~~~~~~~------~t~L~~A~~~~~--~~ii~~Ll~~g~~~~~~~~~g~t~L~~A~~~g  224 (596)
                      |+..|+.+++++|+++|++++.. +..+      .||||.|+..++  .+++++|++.|++++..+..|.||||+|+..|
T Consensus       183 A~~~~~~~iv~~Ll~~ga~~~~~-~~~~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll~~g~din~~d~~g~TpL~~A~~~~  261 (480)
T PHA03100        183 AVEKGNIDVIKFLLDNGADINAG-DIETLLFTIFETPLHIAACYNEITLEVVNYLLSYGVPINIKDVYGFTPLHYAVYNN  261 (480)
T ss_pred             HHHhCCHHHHHHHHHcCCCccCC-CCCCCcHHHHHhHHHHHHHhCcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC
Confidence            99999999999999999998876 4445      799999999999  99999999999999999999999999999999


Q ss_pred             cHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCC
Q psy904          225 YVEVGRVLLDKGADVNAPPVPSSRDTALTIAADKGHCRFVELLLSKGAQVEVKN  278 (596)
Q Consensus       225 ~~~iv~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~g~di~~~d  278 (596)
                      +.+++++|++.|++++.  .+..|.||||+|+..++.+++++|+++|++++..+
T Consensus       262 ~~~iv~~Ll~~gad~n~--~d~~g~tpl~~A~~~~~~~iv~~Ll~~g~~i~~i~  313 (480)
T PHA03100        262 NPEFVKYLLDLGANPNL--VNKYGDTPLHIAILNNNKEIFKLLLNNGPSIKTII  313 (480)
T ss_pred             CHHHHHHHHHcCCCCCc--cCCCCCcHHHHHHHhCCHHHHHHHHhcCCCHHHHH
Confidence            99999999999999887  66899999999999999999999999999887654


No 19 
>PHA02878 ankyrin repeat protein; Provisional
Probab=100.00  E-value=1.3e-38  Score=342.68  Aligned_cols=287  Identities=24%  Similarity=0.273  Sum_probs=209.5

Q ss_pred             cCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccccCCCChHHHHHHHCCcHHHHHHHHhCCCCccCCCCCCCcHHHHHH
Q psy904           40 RDKKGFTPLILAATAGHDKVVDILLNHKADMEAQSERTKDTPLSLACSGGRYEVVELLLTRGANKEHRNVSDYTPLSLAA  119 (596)
Q Consensus        40 ~d~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~~~g~~eivk~LL~~g~~~~~~d~~g~t~L~~A~  119 (596)
                      .+..+.||||+|+..|+.++|++|++.|++++.. +..|.||||+||..|+.+++++|+..+.....  ..+.++++.|+
T Consensus        33 ~~~~~~tPLh~A~~~g~~e~vk~Ll~~gadvn~~-d~~g~TpLh~A~~~g~~~~v~~Ll~~~~~~~~--~~~~~~l~~a~  109 (477)
T PHA02878         33 ASLIPFIPLHQAVEARNLDVVKSLLTRGHNVNQP-DHRDLTPLHIICKEPNKLGMKEMIRSINKCSV--FYTLVAIKDAF  109 (477)
T ss_pred             ccccCcchHHHHHHcCCHHHHHHHHHCCCCCCCC-CCCCCCHHHHHHHCccHhHHHHHHHHHhcccc--ccchhhHHHHH
Confidence            3445667777777777777777777777666543 45667777777777777777777766544333  34566777777


Q ss_pred             hcCCHHHHHHHHhCCCCccccCCCCCCCcHHHHHHHc--CCHHHHHHHHhcCCCcccccccCCCcHHHHHHHcCCHHHHH
Q psy904          120 SGGYVNIIKLLLTHGAEINSRTGSKLGISPLMLAAMN--GHTAAVKLLLDMGSDINAQIETNRNTALTLACFQGRHEVVS  197 (596)
Q Consensus       120 ~~g~~eiv~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~--g~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~  197 (596)
                      ..++.+++++|+..+.+.....    ....+......  .+.+++++|+++|++++......|.||||+|+..|+.++++
T Consensus       110 ~~~~~ei~~~Ll~~~~~~~~~~----~~~~~~~~~~~~~~~~~iv~~Ll~~gadin~~~~~~g~tpLh~A~~~~~~~iv~  185 (477)
T PHA02878        110 NNRNVEIFKIILTNRYKNIQTI----DLVYIDKKSKDDIIEAEITKLLLSYGADINMKDRHKGNTALHYATENKDQRLTE  185 (477)
T ss_pred             HcCCHHHHHHHHhCcccCcccC----cHHHHhhccchhhHHHHHHHHHHHcCCCCCccCCCCCCCHHHHHHhCCCHHHHH
Confidence            7777777777776543322111    00111111111  23458888888888888764444888888888888888888


Q ss_pred             HHHhcCCCcccccCCCChHHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHc-CcHHHHHHHHHCCCCCCC
Q psy904          198 LLLDRKANVEHRAKTGLTPLMEAASGGYVEVGRVLLDKGADVNAPPVPSSRDTALTIAADK-GHCRFVELLLSKGAQVEV  276 (596)
Q Consensus       198 ~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~-~~~~iv~~Ll~~g~di~~  276 (596)
                      +|++.|++++..+..|.||||.|+..|+.+++++|++.|++++.  .+..|.||||+|+.. ++.+++++|+++|++++.
T Consensus       186 ~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in~--~d~~g~TpLh~A~~~~~~~~iv~~Ll~~gadvn~  263 (477)
T PHA02878        186 LLLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTDA--RDKCGNTPLHISVGYCKDYDILKLLLEHGVDVNA  263 (477)
T ss_pred             HHHHCCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCC--CCCCCCCHHHHHHHhcCCHHHHHHHHHcCCCCCc
Confidence            88888888888888888999998888888889988888888887  557888899988865 688888999998988888


Q ss_pred             CCC-CCChHHHHHHhcCcHHHHHHHHHCCCCcccCCCCCCCHHHHHHHcC-CHHHHHHHHhCc
Q psy904          277 KNK-KGNSPLWLAANGGHLSVVELLCKHGADIDSQDNRKVSCLMAAFRKG-HVKAVRWMVNHV  337 (596)
Q Consensus       277 ~d~-~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~~~~g~t~L~~A~~~g-~~~iv~~Ll~~~  337 (596)
                      .+. .|.||||+|  .++.+++++|+++|+|++..|..|.|||++|+..+ ..+++++|+.++
T Consensus       264 ~~~~~g~TpLh~A--~~~~~~v~~Ll~~gadin~~d~~g~TpL~~A~~~~~~~~~~~~li~~~  324 (477)
T PHA02878        264 KSYILGLTALHSS--IKSERKLKLLLEYGADINSLNSYKLTPLSSAVKQYLCINIGRILISNI  324 (477)
T ss_pred             cCCCCCCCHHHHH--ccCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHHcCccchHHHHHHHH
Confidence            875 788999988  46788888999999999888888999998888653 556777776653


No 20 
>KOG4177|consensus
Probab=100.00  E-value=2.7e-40  Score=364.10  Aligned_cols=329  Identities=37%  Similarity=0.514  Sum_probs=228.0

Q ss_pred             cCCCCCcHHHHHHhcCcHHHHHHHHHCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccc------------
Q psy904            7 TESNHDTALTLACAGGHEELVELLLSRGADIEHRDKKGFTPLILAATAGHDKVVDILLNHKADMEAQS------------   74 (596)
Q Consensus         7 ~d~~g~t~L~~A~~~g~~~ivk~Ll~~g~~i~~~d~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~~~~~------------   74 (596)
                      .+..|.||||.|+..|+++++.+|+.+|+.++..+..|.||+|+|++.+..+++++|+++|+++....            
T Consensus       238 ~d~~gl~~lh~a~~~g~~~i~~~l~~~ga~~~~~~vr~~tplh~AA~~~~~e~~~~ll~~ga~~~~~~~~~kt~l~~a~~  317 (1143)
T KOG4177|consen  238 KDESGLTPLHVAAFMGHLDIVKLLLQHGASVNVSTVRGETPLHMAARAGQVEVCKLLLQNGADVLAKARDDQTPLHIASR  317 (1143)
T ss_pred             ccccCccHHHHHHhccchhHHHHHHhcccccCcccccccCcchhhhccchhhhHhhhhccCcccccccccccChhhhhcc
Confidence            46678888888888888888888888888888888888888888888888888888888887764321            


Q ss_pred             --------------------cCCCChHHHHHHHCCcHHHHHHHHhCCCCccCCCCCCCcHHHHHHhcCCHHHHHHHHhCC
Q psy904           75 --------------------ERTKDTPLSLACSGGRYEVVELLLTRGANKEHRNVSDYTPLSLAASGGYVNIIKLLLTHG  134 (596)
Q Consensus        75 --------------------~~~~~t~L~~A~~~g~~eivk~LL~~g~~~~~~d~~g~t~L~~A~~~g~~eiv~~Ll~~g  134 (596)
                                          ...+.+|||+++..++.++..+|+..+......+..+.||+|.|+..|..+++++++..|
T Consensus       318 ~g~~~i~~~~l~~~~~~~aar~~g~t~lHlaa~~~~~~~~~~l~~~~~~~~~a~~k~~~pl~la~~~g~~~~v~Lll~~g  397 (1143)
T KOG4177|consen  318 LGHEEIVHLLLQAGATPNAARTAGYTPLHLAAKEGQVEVAGALLEHGAQRRQAEEKGFTPLHLAVKSGRVSVVELLLEAG  397 (1143)
T ss_pred             cchHHHHHHHhhccCCccccCcCCcccccHhhhhhhHHHHHHhhccccccCcccccCCcchhhhcccCchhHHHhhhhcc
Confidence                                112334444444444444444444444444444556777777777777777777777777


Q ss_pred             CCccccCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCcHHHHHHHcC-CHHHHHHHHhcCCCcccccCCC
Q psy904          135 AEINSRTGSKLGISPLMLAAMNGHTAAVKLLLDMGSDINAQIETNRNTALTLACFQG-RHEVVSLLLDRKANVEHRAKTG  213 (596)
Q Consensus       135 ~~~~~~~~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~-~~~ii~~Ll~~g~~~~~~~~~g  213 (596)
                      .+++.....  |.||||.++..++..+++.++..|++.+.. +..|.|++|.|+..+ ..++...++..|.+++.....|
T Consensus       398 a~~~~~gk~--gvTplh~aa~~~~~~~v~l~l~~gA~~~~~-~~lG~T~lhvaa~~g~~~~~~~~l~~~g~~~n~~s~~G  474 (1143)
T KOG4177|consen  398 ADPNSAGKN--GVTPLHVAAHYGNPRVVKLLLKRGASPNAK-AKLGYTPLHVAAKKGRYLQIARLLLQYGADPNAVSKQG  474 (1143)
T ss_pred             CCcccCCCC--CcceeeehhhccCcceEEEEeccCCChhhH-hhcCCChhhhhhhcccHhhhhhhHhhcCCCcchhcccc
Confidence            775554433  666666666666666666666666666554 445566666666666 5555566666666666666666


Q ss_pred             ChHHHHHHhcCcHHHHHHHHh---------------------------------CCCCCCCCCCCCCCCcHHHHHHHcCc
Q psy904          214 LTPLMEAASGGYVEVGRVLLD---------------------------------KGADVNAPPVPSSRDTALTIAADKGH  260 (596)
Q Consensus       214 ~t~L~~A~~~g~~~iv~~Ll~---------------------------------~g~~~~~~~~~~~g~t~L~~A~~~~~  260 (596)
                      .||||+|+..|+.+++..|++                                 +|++++.  ....|+||||.||..|+
T Consensus       475 ~T~Lhlaaq~Gh~~~~~llle~~~~~~~~~~~~l~~lhla~~~~~v~~~~~l~~~ga~v~~--~~~r~~TpLh~A~~~g~  552 (1143)
T KOG4177|consen  475 FTPLHLAAQEGHTEVVQLLLEGGANDNLDAKKGLTPLHLAADEDTVKVAKILLEHGANVDL--RTGRGYTPLHVAVHYGN  552 (1143)
T ss_pred             CcchhhhhccCCchHHHHhhhcCCccCccchhccchhhhhhhhhhHHHHHHHhhcCCceeh--hcccccchHHHHHhcCC
Confidence            666666666666555555544                                 4544444  34567778888888888


Q ss_pred             HHHHHHHHHCCCCCCCCCCCCChHHHHHHhcCcHHHHHHHHHCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHhCcCCC
Q psy904          261 CRFVELLLSKGAQVEVKNKKGNSPLWLAANGGHLSVVELLCKHGADIDSQDNRKVSCLMAAFRKGHVKAVRWMVNHVAQF  340 (596)
Q Consensus       261 ~~iv~~Ll~~g~di~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~  340 (596)
                      +.+|++||++|+|++.+++.|+||||.|+..|+.+|+.+|+++|+++|..+.+|.|||++|++.|+++++++|+..++..
T Consensus       553 v~~VkfLLe~gAdv~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~GA~vna~d~~g~TpL~iA~~lg~~~~~k~l~~~~~~~  632 (1143)
T KOG4177|consen  553 VDLVKFLLEHGADVNAKDKLGYTPLHQAAQQGHNDIAELLLKHGASVNAADLDGFTPLHIAVRLGYLSVVKLLKVVTATP  632 (1143)
T ss_pred             chHHHHhhhCCccccccCCCCCChhhHHHHcChHHHHHHHHHcCCCCCcccccCcchhHHHHHhcccchhhHHHhccCcc
Confidence            88888888888888888877888888888888888888888888888888888888888888888888888887777653


No 21 
>PHA02878 ankyrin repeat protein; Provisional
Probab=100.00  E-value=5.2e-39  Score=345.64  Aligned_cols=306  Identities=23%  Similarity=0.265  Sum_probs=257.2

Q ss_pred             CCCCCcHHHHHHhcCcHHHHHHHHHCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccccCCCChHHHHHHH
Q psy904            8 ESNHDTALTLACAGGHEELVELLLSRGADIEHRDKKGFTPLILAATAGHDKVVDILLNHKADMEAQSERTKDTPLSLACS   87 (596)
Q Consensus         8 d~~g~t~L~~A~~~g~~~ivk~Ll~~g~~i~~~d~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~~   87 (596)
                      ...+.||||+||..|+.++|++|++.|++++..|..|.||||+||..|+.+++++|+..+.....   ..+.++++.|+.
T Consensus        34 ~~~~~tPLh~A~~~g~~e~vk~Ll~~gadvn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~~~~~~~---~~~~~~l~~a~~  110 (477)
T PHA02878         34 SLIPFIPLHQAVEARNLDVVKSLLTRGHNVNQPDHRDLTPLHIICKEPNKLGMKEMIRSINKCSV---FYTLVAIKDAFN  110 (477)
T ss_pred             cccCcchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCccHhHHHHHHHHHhcccc---ccchhhHHHHHH
Confidence            34678999999999999999999999999999999999999999999999999999998765544   457799999999


Q ss_pred             CCcHHHHHHHHhCCCCccCCCCCCCcHHHHHHhcC--CHHHHHHHHhCCCCccccCCCCCCCcHHHHHHHcCCHHHHHHH
Q psy904           88 GGRYEVVELLLTRGANKEHRNVSDYTPLSLAASGG--YVNIIKLLLTHGAEINSRTGSKLGISPLMLAAMNGHTAAVKLL  165 (596)
Q Consensus        88 ~g~~eivk~LL~~g~~~~~~d~~g~t~L~~A~~~g--~~eiv~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~g~~eiv~~L  165 (596)
                      .++.+++++|+..+.......  ....+......+  ..+++++|+++|++++..... .|.||||+|+.+|+.+++++|
T Consensus       111 ~~~~ei~~~Ll~~~~~~~~~~--~~~~~~~~~~~~~~~~~iv~~Ll~~gadin~~~~~-~g~tpLh~A~~~~~~~iv~~L  187 (477)
T PHA02878        111 NRNVEIFKIILTNRYKNIQTI--DLVYIDKKSKDDIIEAEITKLLLSYGADINMKDRH-KGNTALHYATENKDQRLTELL  187 (477)
T ss_pred             cCCHHHHHHHHhCcccCcccC--cHHHHhhccchhhHHHHHHHHHHHcCCCCCccCCC-CCCCHHHHHHhCCCHHHHHHH
Confidence            999999999998765432111  111111111222  345999999999998876532 289999999999999999999


Q ss_pred             HhcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccCCCChHHHHHHhc-CcHHHHHHHHhCCCCCCCCCC
Q psy904          166 LDMGSDINAQIETNRNTALTLACFQGRHEVVSLLLDRKANVEHRAKTGLTPLMEAASG-GYVEVGRVLLDKGADVNAPPV  244 (596)
Q Consensus       166 l~~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~g~~~~~~~~~g~t~L~~A~~~-g~~~iv~~Ll~~g~~~~~~~~  244 (596)
                      +..|++++.. +..|.||||.|+..++.+++++|++.|++++..+..|.||||+|+.. ++.+++++|+++|++++... 
T Consensus       188 l~~gad~n~~-d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~gadvn~~~-  265 (477)
T PHA02878        188 LSYGANVNIP-DKTNNSPLHHAVKHYNKPIVHILLENGASTDARDKCGNTPLHISVGYCKDYDILKLLLEHGVDVNAKS-  265 (477)
T ss_pred             HHCCCCCCCc-CCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHHcCCCCCccC-
Confidence            9999999876 77899999999999999999999999999999999999999999975 78999999999999998742 


Q ss_pred             CCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCChHHHHHHhcC-cHHHHHHHHHC-----CCCcccCCCCCCCHH
Q psy904          245 PSSRDTALTIAADKGHCRFVELLLSKGAQVEVKNKKGNSPLWLAANGG-HLSVVELLCKH-----GADIDSQDNRKVSCL  318 (596)
Q Consensus       245 ~~~g~t~L~~A~~~~~~~iv~~Ll~~g~di~~~d~~g~TpL~~A~~~g-~~~iv~~Ll~~-----gad~~~~~~~g~t~L  318 (596)
                      ...|.||||+|  .++.+++++|+++|+|++..|..|.||||+|+..+ ..+++++|+.+     +.+++..+..|.++-
T Consensus       266 ~~~g~TpLh~A--~~~~~~v~~Ll~~gadin~~d~~g~TpL~~A~~~~~~~~~~~~li~~~~~~~~~~~~~~~~~g~~~n  343 (477)
T PHA02878        266 YILGLTALHSS--IKSERKLKLLLEYGADINSLNSYKLTPLSSAVKQYLCINIGRILISNICLLKRIKPDIKNSEGFIDN  343 (477)
T ss_pred             CCCCCCHHHHH--ccCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHHcCccchHHHHHHHHHHHHhccCcccCcHHHHHH
Confidence            23699999999  57889999999999999999999999999999754 56777777755     467777777776654


Q ss_pred             HHHHH
Q psy904          319 MAAFR  323 (596)
Q Consensus       319 ~~A~~  323 (596)
                      ..++.
T Consensus       344 ~~~i~  348 (477)
T PHA02878        344 MDCIT  348 (477)
T ss_pred             HHHHh
Confidence            44433


No 22 
>PHA02917 ankyrin-like protein; Provisional
Probab=100.00  E-value=1.8e-37  Score=339.42  Aligned_cols=314  Identities=18%  Similarity=0.166  Sum_probs=252.4

Q ss_pred             HHHHHHHHHCCCCccccCCCCCcHHHHHHHc---CCHHHHHHHHhCCCCccccccCCCChHHHHHHHCCcHH----HHHH
Q psy904           24 EELVELLLSRGADIEHRDKKGFTPLILAATA---GHDKVVDILLNHKADMEAQSERTKDTPLSLACSGGRYE----VVEL   96 (596)
Q Consensus        24 ~~ivk~Ll~~g~~i~~~d~~g~t~L~~A~~~---g~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~~~g~~e----ivk~   96 (596)
                      ++.|+.|+..|..++..|.+|.||||+|+..   |+.++|++|+++|++++.. +..|.||||+|+..|+.+    ++++
T Consensus        12 ~~~~~~l~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~v~~Ll~~ga~v~~~-~~~g~TpL~~Aa~~g~~~v~~~~~~~   90 (661)
T PHA02917         12 LDELKQMLRDRDPNDTRNQFKNNALHAYLFNEHCNNVEVVKLLLDSGTNPLHK-NWRQLTPLEEYTNSRHVKVNKDIAMA   90 (661)
T ss_pred             HHHHHHHHhccCcccccCCCCCcHHHHHHHhhhcCcHHHHHHHHHCCCCcccc-CCCCCCHHHHHHHcCChhHHHHHHHH
Confidence            6788999999999999999999999998655   8899999999999999754 678999999999999854    5678


Q ss_pred             HHhCCCCccCCCCCCCcHHHHHHhcCCHHHHHHHHhCCCCccccCCCCCCCcHHHHHH--HcCCHHHHHHHHhcCCCccc
Q psy904           97 LLTRGANKEHRNVSDYTPLSLAASGGYVNIIKLLLTHGAEINSRTGSKLGISPLMLAA--MNGHTAAVKLLLDMGSDINA  174 (596)
Q Consensus        97 LL~~g~~~~~~d~~g~t~L~~A~~~g~~eiv~~Ll~~g~~~~~~~~~~~g~t~L~~A~--~~g~~eiv~~Ll~~~~~~~~  174 (596)
                      |++.+...+..+  ..++++.|+.+|+.++|++|+++|++++..+.+  |.||||.++  .+|+.+++++|+++|++++.
T Consensus        91 Ll~~~~~~n~~~--~~~~~~~a~~~~~~e~vk~Ll~~Gadin~~d~~--g~T~L~~~~a~~~~~~eivklLi~~Ga~vn~  166 (661)
T PHA02917         91 LLEATGYSNIND--FNIFSYMKSKNVDVDLIKVLVEHGFDLSVKCEN--HRSVIENYVMTDDPVPEIIDLFIENGCSVLY  166 (661)
T ss_pred             HHhccCCCCCCC--cchHHHHHhhcCCHHHHHHHHHcCCCCCccCCC--CccHHHHHHHccCCCHHHHHHHHHcCCCccc
Confidence            887654344433  236788899999999999999999999987654  999999654  57899999999999999875


Q ss_pred             cc--cc-----------CCCcHHHHHHH-----------cCCHHHHHHHHhcCCCcccccCCCChHHHHHHhcCcH--HH
Q psy904          175 QI--ET-----------NRNTALTLACF-----------QGRHEVVSLLLDRKANVEHRAKTGLTPLMEAASGGYV--EV  228 (596)
Q Consensus       175 ~~--~~-----------~~~t~L~~A~~-----------~~~~~ii~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~--~i  228 (596)
                      ..  +.           .+.||||+|+.           +++.+++++|++.|++++..+..|.||||+|+..|+.  ++
T Consensus       167 ~d~~~~~g~~~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gadvn~~d~~G~TpLh~A~~~g~~~~ei  246 (661)
T PHA02917        167 EDEDDEYGYAYDDYQPRNCGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHGIKPSSIDKNYCTALQYYIKSSHIDIDI  246 (661)
T ss_pred             cccccccccccccccccccccHHHHHHhhcccccccccccCcHHHHHHHHHCCCCcccCCCCCCcHHHHHHHcCCCcHHH
Confidence            32  11           22599999986           4689999999999999999999999999999999985  78


Q ss_pred             HHHHHhCCCCCCCCC--CCCCCCcHHHHHH--------------------------------------------------
Q psy904          229 GRVLLDKGADVNAPP--VPSSRDTALTIAA--------------------------------------------------  256 (596)
Q Consensus       229 v~~Ll~~g~~~~~~~--~~~~g~t~L~~A~--------------------------------------------------  256 (596)
                      |++|+. |++++...  .+..|.+|+|+|+                                                  
T Consensus       247 vk~Li~-g~d~~~~~~~~~~~~~~~~~~a~yl~~~~~~~~~v~~~iv~~Li~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~  325 (661)
T PHA02917        247 VKLLMK-GIDNTAYSYIDDLTCCTRGIMADYLNSDYRYNKDVDLDLVKLFLENGKPHGIMCSIVPLWRNDKETISLILKT  325 (661)
T ss_pred             HHHHHh-CCcccccccccCcccccchHHHHHHHhhccccccchHHHHHHHHhCCCCCceeEeeecccccchHHHHHHHHH
Confidence            998875 66553210  1112222222222                                                  


Q ss_pred             --------------HcCc--HHHHHHHHHCCCCCCCC------------------------------CCCCChHHHHHHh
Q psy904          257 --------------DKGH--CRFVELLLSKGAQVEVK------------------------------NKKGNSPLWLAAN  290 (596)
Q Consensus       257 --------------~~~~--~~iv~~Ll~~g~di~~~------------------------------d~~g~TpL~~A~~  290 (596)
                                    ..|.  .+++++|+++|++++.+                              +..|.||||.|+.
T Consensus       326 ~~~~~~~~~l~~~~~~g~~~~~~v~~Ll~~GAdvn~~~~~g~~~~~~~~~~~i~~LL~~~ga~~~~~~~~G~TpL~~a~~  405 (661)
T PHA02917        326 MNSDVLQHILIEYMTFGDIDIPLVECMLEYGAVVNKEAIHGYFRNINIDSYTMKYLLKKEGGDAVNHLDDGEIPIGHLCK  405 (661)
T ss_pred             hchHHHHHHHHHHHHcCCCcHHHHHHHHHcCCCCCCCCccccchhhcCCHHHHHHHHHhcCCCccccCCCCCChhHHHHH
Confidence                          2333  44788888888876543                              3468999999874


Q ss_pred             cC-----------------------cHHHHHHHHHCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHhCcCCCCCc
Q psy904          291 GG-----------------------HLSVVELLCKHGADIDSQDNRKVSCLMAAFRKGHVKAVRWMVNHVAQFPSD  343 (596)
Q Consensus       291 ~g-----------------------~~~iv~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~  343 (596)
                      .+                       ..+++++|+.+|++++.+|..|.||||+|+..++.+++++|+.+|+++...
T Consensus       406 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~GAdIN~kd~~G~TpLh~Aa~~~~~~~v~~Ll~~GAdin~~  481 (661)
T PHA02917        406 SNYGCYNFYTYTYKKGLCDMSYACPILSTINICLPYLKDINMIDKRGETLLHKAVRYNKQSLVSLLLESGSDVNIR  481 (661)
T ss_pred             hcccchhhhhhhhhhccchhhhhhhhHHHHHHHHHCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHCcCCCCCC
Confidence            33                       356889999999999999999999999999999999999999999987754


No 23 
>KOG4177|consensus
Probab=100.00  E-value=6.7e-40  Score=361.04  Aligned_cols=334  Identities=38%  Similarity=0.582  Sum_probs=300.6

Q ss_pred             ccCCCCCcHHHHHHhcCcHHHHHHHHHCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccccCCCChHHHHH
Q psy904            6 ETESNHDTALTLACAGGHEELVELLLSRGADIEHRDKKGFTPLILAATAGHDKVVDILLNHKADMEAQSERTKDTPLSLA   85 (596)
Q Consensus         6 ~~d~~g~t~L~~A~~~g~~~ivk~Ll~~g~~i~~~d~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A   85 (596)
                      -.+.+|.||||.||..+.+.+++.++.+|+++...|..|.+|||.|+..|+++++.+|+.+|+.++.. +..+.||+|.|
T Consensus       204 a~~~~~~tpl~~a~~~nri~~~eLll~~gadv~a~d~~gl~~lh~a~~~g~~~i~~~l~~~ga~~~~~-~vr~~tplh~A  282 (1143)
T KOG4177|consen  204 ASALNGFTPLHIACKKNRIKVVELLLKHGADVSAKDESGLTPLHVAAFMGHLDIVKLLLQHGASVNVS-TVRGETPLHMA  282 (1143)
T ss_pred             ccccCCCCchhhhccccccceeeeeeeccCcCCcccccCccHHHHHHhccchhHHHHHHhcccccCcc-cccccCcchhh
Confidence            35788999999999999999999999999999999999999999999999999999999999998875 57899999999


Q ss_pred             HHCCcHHHHHHHHhCCCCccCCCCCCCcHHHHHHhcCCHHHHHHHHhCCCCccccC------------------------
Q psy904           86 CSGGRYEVVELLLTRGANKEHRNVSDYTPLSLAASGGYVNIIKLLLTHGAEINSRT------------------------  141 (596)
Q Consensus        86 ~~~g~~eivk~LL~~g~~~~~~d~~g~t~L~~A~~~g~~eiv~~Ll~~g~~~~~~~------------------------  141 (596)
                      +..+..+++++|++.|+++...+....||+|.|...|+.+++.+++..++.++...                        
T Consensus       283 A~~~~~e~~~~ll~~ga~~~~~~~~~kt~l~~a~~~g~~~i~~~~l~~~~~~~aar~~g~t~lHlaa~~~~~~~~~~l~~  362 (1143)
T KOG4177|consen  283 ARAGQVEVCKLLLQNGADVLAKARDDQTPLHIASRLGHEEIVHLLLQAGATPNAARTAGYTPLHLAAKEGQVEVAGALLE  362 (1143)
T ss_pred             hccchhhhHhhhhccCcccccccccccChhhhhcccchHHHHHHHhhccCCccccCcCCcccccHhhhhhhHHHHHHhhc
Confidence            99999999999999999998888888888888888777777777777655443211                        


Q ss_pred             -------CCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccCCCC
Q psy904          142 -------GSKLGISPLMLAAMNGHTAAVKLLLDMGSDINAQIETNRNTALTLACFQGRHEVVSLLLDRKANVEHRAKTGL  214 (596)
Q Consensus       142 -------~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~g~~~~~~~~~g~  214 (596)
                             ....+.+|+|+|+..|..++++.++..|.+++.. ...|.||||.++.+++..+++.+++.|++++..+..|+
T Consensus       363 ~~~~~~~a~~k~~~pl~la~~~g~~~~v~Lll~~ga~~~~~-gk~gvTplh~aa~~~~~~~v~l~l~~gA~~~~~~~lG~  441 (1143)
T KOG4177|consen  363 HGAQRRQAEEKGFTPLHLAVKSGRVSVVELLLEAGADPNSA-GKNGVTPLHVAAHYGNPRVVKLLLKRGASPNAKAKLGY  441 (1143)
T ss_pred             cccccCcccccCCcchhhhcccCchhHHHhhhhccCCcccC-CCCCcceeeehhhccCcceEEEEeccCCChhhHhhcCC
Confidence                   2344899999999999999999999999997776 78899999999999999999999999999999999999


Q ss_pred             hHHHHHHhcC-cHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHH-------------------------
Q psy904          215 TPLMEAASGG-YVEVGRVLLDKGADVNAPPVPSSRDTALTIAADKGHCRFVELLL-------------------------  268 (596)
Q Consensus       215 t~L~~A~~~g-~~~iv~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll-------------------------  268 (596)
                      ||+|+|+..| +.++...++..|.++|.  ....|.||||+|+..|+.+++..|+                         
T Consensus       442 T~lhvaa~~g~~~~~~~~l~~~g~~~n~--~s~~G~T~Lhlaaq~Gh~~~~~llle~~~~~~~~~~~~l~~lhla~~~~~  519 (1143)
T KOG4177|consen  442 TPLHVAAKKGRYLQIARLLLQYGADPNA--VSKQGFTPLHLAAQEGHTEVVQLLLEGGANDNLDAKKGLTPLHLAADEDT  519 (1143)
T ss_pred             ChhhhhhhcccHhhhhhhHhhcCCCcch--hccccCcchhhhhccCCchHHHHhhhcCCccCccchhccchhhhhhhhhh
Confidence            9999999999 89999999999999988  5578888888888887766655554                         


Q ss_pred             --------HCCCCCCCCCCCCChHHHHHHhcCcHHHHHHHHHCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHhCcCCC
Q psy904          269 --------SKGAQVEVKNKKGNSPLWLAANGGHLSVVELLCKHGADIDSQDNRKVSCLMAAFRKGHVKAVRWMVNHVAQF  340 (596)
Q Consensus       269 --------~~g~di~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~  340 (596)
                              .+|++++.++..|+||||+|+..|++++|++|+++|+|++.++..|+||||.|+..|+.+|+.+|+++|+.+
T Consensus       520 v~~~~~l~~~ga~v~~~~~r~~TpLh~A~~~g~v~~VkfLLe~gAdv~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~GA~v  599 (1143)
T KOG4177|consen  520 VKVAKILLEHGANVDLRTGRGYTPLHVAVHYGNVDLVKFLLEHGADVNAKDKLGYTPLHQAAQQGHNDIAELLLKHGASV  599 (1143)
T ss_pred             HHHHHHHhhcCCceehhcccccchHHHHHhcCCchHHHHhhhCCccccccCCCCCChhhHHHHcChHHHHHHHHHcCCCC
Confidence                    556677788899999999999999999999999999999999999999999999999999999999999987


Q ss_pred             CCc
Q psy904          341 PSD  343 (596)
Q Consensus       341 ~~~  343 (596)
                      ...
T Consensus       600 na~  602 (1143)
T KOG4177|consen  600 NAA  602 (1143)
T ss_pred             Ccc
Confidence            754


No 24 
>PHA02989 ankyrin repeat protein; Provisional
Probab=100.00  E-value=1.5e-37  Score=335.34  Aligned_cols=285  Identities=19%  Similarity=0.264  Sum_probs=221.1

Q ss_pred             cHHHHHHh---cCcHHHHHHHHHCCCCccccCCCCCcHHHHHHHc--CCHHHHHHHHhCCCCccccccCCCChHHHHHHH
Q psy904           13 TALTLACA---GGHEELVELLLSRGADIEHRDKKGFTPLILAATA--GHDKVVDILLNHKADMEAQSERTKDTPLSLACS   87 (596)
Q Consensus        13 t~L~~A~~---~g~~~ivk~Ll~~g~~i~~~d~~g~t~L~~A~~~--g~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~~   87 (596)
                      ++||.-+.   ..+.++|++|++.|+++|.. ..|.||||.++..  ++.++|++|+++|++++...  .+.||||.|+.
T Consensus         2 ~~l~~y~~~~~~~~~~~v~~LL~~GadvN~~-~~g~t~l~~~~~~~~~~~~iv~~Ll~~GAdvn~~~--~~~tpL~~a~~   78 (494)
T PHA02989          2 SSLYEYILYSDTVDKNALEFLLRTGFDVNEE-YRGNSILLLYLKRKDVKIKIVKLLIDNGADVNYKG--YIETPLCAVLR   78 (494)
T ss_pred             cHHHHHHHcCCcCcHHHHHHHHHcCCCcccc-cCCCCHHHHHHhcCCCChHHHHHHHHcCCCccCCC--CCCCcHHHHHh
Confidence            34554444   57899999999999999998 6788998776654  37899999999999998653  56899999987


Q ss_pred             CC------cHHHHHHHHhCCCCccCCCCCCCcHHHHHHhc---CCHHHHHHHHhCCCCc-cccCCCCCCCcHHHHHHHc-
Q psy904           88 GG------RYEVVELLLTRGANKEHRNVSDYTPLSLAASG---GYVNIIKLLLTHGAEI-NSRTGSKLGISPLMLAAMN-  156 (596)
Q Consensus        88 ~g------~~eivk~LL~~g~~~~~~d~~g~t~L~~A~~~---g~~eiv~~Ll~~g~~~-~~~~~~~~g~t~L~~A~~~-  156 (596)
                      ++      +.+++++|+++|++++..+..|.||||.|+..   |+.+++++|+++|+++ +..+  ..|.||||+|+.. 
T Consensus        79 ~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~Gadin~~~d--~~g~tpLh~a~~~~  156 (494)
T PHA02989         79 NREITSNKIKKIVKLLLKFGADINLKTFNGVSPIVCFIYNSNINNCDMLRFLLSKGINVNDVKN--SRGYNLLHMYLESF  156 (494)
T ss_pred             ccCcchhhHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhcccCcHHHHHHHHHCCCCcccccC--CCCCCHHHHHHHhc
Confidence            54      57899999999999999999999999988765   6789999999999988 5544  3488999988754 


Q ss_pred             -CCHHHHHHHHhcCCCcccccccCCCcHHHHHHHcC----CHHHHHHHHhcCCCcccccCCCChHHHHHHhc------Cc
Q psy904          157 -GHTAAVKLLLDMGSDINAQIETNRNTALTLACFQG----RHEVVSLLLDRKANVEHRAKTGLTPLMEAASG------GY  225 (596)
Q Consensus       157 -g~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~----~~~ii~~Ll~~g~~~~~~~~~g~t~L~~A~~~------g~  225 (596)
                       ++.+++++|+++|++++...+..|.||||.|+..+    +.+++++|++.|++++..+..+.||||.++..      +.
T Consensus       157 ~~~~~iv~~Ll~~Gadi~~~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~vn~~~~~~~t~l~~~~~~~~~~~~~~  236 (494)
T PHA02989        157 SVKKDVIKILLSFGVNLFEKTSLYGLTPMNIYLRNDIDVISIKVIKYLIKKGVNIETNNNGSESVLESFLDNNKILSKKE  236 (494)
T ss_pred             cCCHHHHHHHHHcCCCccccccccCCChHHHHHhcccccccHHHHHHHHhCCCCccccCCccccHHHHHHHhchhhcccc
Confidence             57899999999998887744667888888887654    78888888888888888888888888876543      24


Q ss_pred             HHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCChHHHHHHhcCcHHHHHHHHHCCC
Q psy904          226 VEVGRVLLDKGADVNAPPVPSSRDTALTIAADKGHCRFVELLLSKGAQVEVKNKKGNSPLWLAANGGHLSVVELLCKHGA  305 (596)
Q Consensus       226 ~~iv~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~g~di~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga  305 (596)
                      ..++.+|+. |++++.  .+..|.||||+|+..|+.+++++|+++|+|++.+|..|.||||+|+..|+.++|++|++.+.
T Consensus       237 ~~il~~l~~-~advn~--~d~~G~TpL~~Aa~~~~~~~v~~LL~~Gadin~~d~~G~TpL~~A~~~~~~~iv~~LL~~~p  313 (494)
T PHA02989        237 FKVLNFILK-YIKINK--KDKKGFNPLLISAKVDNYEAFNYLLKLGDDIYNVSKDGDTVLTYAIKHGNIDMLNRILQLKP  313 (494)
T ss_pred             hHHHHHHHh-CCCCCC--CCCCCCCHHHHHHHhcCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCC
Confidence            556665544 466665  44567777777777777777777777777777777777777777777777777777776654


No 25 
>PHA02989 ankyrin repeat protein; Provisional
Probab=100.00  E-value=2.1e-37  Score=334.18  Aligned_cols=287  Identities=22%  Similarity=0.319  Sum_probs=248.2

Q ss_pred             cHHHHHHH---cCCHHHHHHHHhCCCCccccccCCCChHHHHHHHC--CcHHHHHHHHhCCCCccCCCCCCCcHHHHHHh
Q psy904           46 TPLILAAT---AGHDKVVDILLNHKADMEAQSERTKDTPLSLACSG--GRYEVVELLLTRGANKEHRNVSDYTPLSLAAS  120 (596)
Q Consensus        46 t~L~~A~~---~g~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~~~--g~~eivk~LL~~g~~~~~~d~~g~t~L~~A~~  120 (596)
                      ++||..+.   ..+.++|++|+++|++++..  ..|.||||.++..  ++.++|++|+++|++++..+ .+.||||.|+.
T Consensus         2 ~~l~~y~~~~~~~~~~~v~~LL~~GadvN~~--~~g~t~l~~~~~~~~~~~~iv~~Ll~~GAdvn~~~-~~~tpL~~a~~   78 (494)
T PHA02989          2 SSLYEYILYSDTVDKNALEFLLRTGFDVNEE--YRGNSILLLYLKRKDVKIKIVKLLIDNGADVNYKG-YIETPLCAVLR   78 (494)
T ss_pred             cHHHHHHHcCCcCcHHHHHHHHHcCCCcccc--cCCCCHHHHHHhcCCCChHHHHHHHHcCCCccCCC-CCCCcHHHHHh
Confidence            35555554   36889999999999999876  4588988765543  47999999999999999876 56899999987


Q ss_pred             cC------CHHHHHHHHhCCCCccccCCCCCCCcHHHHHHHc---CCHHHHHHHHhcCCCcccccccCCCcHHHHHHHc-
Q psy904          121 GG------YVNIIKLLLTHGAEINSRTGSKLGISPLMLAAMN---GHTAAVKLLLDMGSDINAQIETNRNTALTLACFQ-  190 (596)
Q Consensus       121 ~g------~~eiv~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~---g~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~~~-  190 (596)
                      ++      +.+++++|+++|++++..+..  |.||||.|+..   |+.+++++|+++|++++...+..|.||||+|+.. 
T Consensus        79 ~~~~~~~~~~~iv~~Ll~~Gadin~~d~~--g~tpL~~a~~~~~~~~~eiv~~Ll~~Gadin~~~d~~g~tpLh~a~~~~  156 (494)
T PHA02989         79 NREITSNKIKKIVKLLLKFGADINLKTFN--GVSPIVCFIYNSNINNCDMLRFLLSKGINVNDVKNSRGYNLLHMYLESF  156 (494)
T ss_pred             ccCcchhhHHHHHHHHHHCCCCCCCCCCC--CCcHHHHHHHhcccCcHHHHHHHHHCCCCcccccCCCCCCHHHHHHHhc
Confidence            54      578999999999999887654  99999988765   6899999999999999444478899999998764 


Q ss_pred             -CCHHHHHHHHhcCCCccc-ccCCCChHHHHHHhcC----cHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHc------
Q psy904          191 -GRHEVVSLLLDRKANVEH-RAKTGLTPLMEAASGG----YVEVGRVLLDKGADVNAPPVPSSRDTALTIAADK------  258 (596)
Q Consensus       191 -~~~~ii~~Ll~~g~~~~~-~~~~g~t~L~~A~~~g----~~~iv~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~------  258 (596)
                       ++.+++++|+++|++++. .+..|.||||.|+..+    +.+++++|++.|++++..  +..+.|+||.++..      
T Consensus       157 ~~~~~iv~~Ll~~Gadi~~~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~vn~~--~~~~~t~l~~~~~~~~~~~~  234 (494)
T PHA02989        157 SVKKDVIKILLSFGVNLFEKTSLYGLTPMNIYLRNDIDVISIKVIKYLIKKGVNIETN--NNGSESVLESFLDNNKILSK  234 (494)
T ss_pred             cCCHHHHHHHHHcCCCccccccccCCChHHHHHhcccccccHHHHHHHHhCCCCcccc--CCccccHHHHHHHhchhhcc
Confidence             689999999999999998 6789999999998754    899999999999999874  45788999987654      


Q ss_pred             CcHHHHHHHHHCCCCCCCCCCCCChHHHHHHhcCcHHHHHHHHHCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHhCcC
Q psy904          259 GHCRFVELLLSKGAQVEVKNKKGNSPLWLAANGGHLSVVELLCKHGADIDSQDNRKVSCLMAAFRKGHVKAVRWMVNHVA  338 (596)
Q Consensus       259 ~~~~iv~~Ll~~g~di~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~  338 (596)
                      +...++.+|+. |++++.+|..|.||||+|+..|+.+++++|+++|+|++.+|..|.|||++|+..|+.++|++|++.++
T Consensus       235 ~~~~il~~l~~-~advn~~d~~G~TpL~~Aa~~~~~~~v~~LL~~Gadin~~d~~G~TpL~~A~~~~~~~iv~~LL~~~p  313 (494)
T PHA02989        235 KEFKVLNFILK-YIKINKKDKKGFNPLLISAKVDNYEAFNYLLKLGDDIYNVSKDGDTVLTYAIKHGNIDMLNRILQLKP  313 (494)
T ss_pred             cchHHHHHHHh-CCCCCCCCCCCCCHHHHHHHhcCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCC
Confidence            35678887765 69999999999999999999999999999999999999999999999999999999999999999876


Q ss_pred             CC
Q psy904          339 QF  340 (596)
Q Consensus       339 ~~  340 (596)
                      ..
T Consensus       314 ~~  315 (494)
T PHA02989        314 GK  315 (494)
T ss_pred             Ch
Confidence            43


No 26 
>PHA02791 ankyrin-like protein; Provisional
Probab=100.00  E-value=4.6e-37  Score=302.50  Aligned_cols=239  Identities=23%  Similarity=0.220  Sum_probs=203.9

Q ss_pred             CCcHHHHHHHHhCCCCccCCCCCCCcHHHHHHhcCCHHHHHHHHhCCCCccccCCCCCCCcHHHHHHHcCCHHHHHHHHh
Q psy904           88 GGRYEVVELLLTRGANKEHRNVSDYTPLSLAASGGYVNIIKLLLTHGAEINSRTGSKLGISPLMLAAMNGHTAAVKLLLD  167 (596)
Q Consensus        88 ~g~~eivk~LL~~g~~~~~~d~~g~t~L~~A~~~g~~eiv~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~g~~eiv~~Ll~  167 (596)
                      .++.+++++|+++|++  ..|..|.||||+|+..|+.+++++|+..|++++...    +.||||+|+..|+.+++++|+.
T Consensus         9 ~~~~~~~~~Lis~~a~--~~D~~G~TpLh~Aa~~g~~eiv~~Ll~~ga~~n~~d----~~TpLh~Aa~~g~~eiV~lLL~   82 (284)
T PHA02791          9 WKSKQLKSFLSSKDAF--KADVHGHSALYYAIADNNVRLVCTLLNAGALKNLLE----NEFPLHQAATLEDTKIVKILLF   82 (284)
T ss_pred             cCHHHHHHHHHhCCCC--CCCCCCCcHHHHHHHcCCHHHHHHHHHCcCCCcCCC----CCCHHHHHHHCCCHHHHHHHHH
Confidence            4677888888887764  467778888888888888888888888887766542    5788999988889999999988


Q ss_pred             cCCCcccccccCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccCCC-ChHHHHHHhcCcHHHHHHHHhCCCCCCCCCCCC
Q psy904          168 MGSDINAQIETNRNTALTLACFQGRHEVVSLLLDRKANVEHRAKTG-LTPLMEAASGGYVEVGRVLLDKGADVNAPPVPS  246 (596)
Q Consensus       168 ~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~g~~~~~~~~~g-~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~  246 (596)
                      .|++++.. +..|.||||+|+..|+.+++++|++.|++++..+..| .||||+|+..|+.+++++|++++++..   ...
T Consensus        83 ~Gadvn~~-d~~G~TpLh~Aa~~g~~eivk~Ll~~gadin~~~~~g~~TpL~~Aa~~g~~eivk~LL~~~~~~~---d~~  158 (284)
T PHA02791         83 SGMDDSQF-DDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTF---DLA  158 (284)
T ss_pred             CCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccCCCCCcHHHHHHHHcCCHHHHHHHHhcCCccc---ccc
Confidence            88888765 6778899999999999999999999999998888777 489999999999999999999875431   112


Q ss_pred             CCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCChH-HHHHHhcCcHHHHHHHHHCCCCcccCCCCCCCHHHHHHHcC
Q psy904          247 SRDTALTIAADKGHCRFVELLLSKGAQVEVKNKKGNSP-LWLAANGGHLSVVELLCKHGADIDSQDNRKVSCLMAAFRKG  325 (596)
Q Consensus       247 ~g~t~L~~A~~~~~~~iv~~Ll~~g~di~~~d~~g~Tp-L~~A~~~g~~~iv~~Ll~~gad~~~~~~~g~t~L~~A~~~g  325 (596)
                      .|.||||+|+..|+.+++++|+++|++++..|..|.|| ||+|+..|+.++|++|+++|++++..|..| ++|      +
T Consensus       159 ~g~TpLh~Aa~~g~~eiv~lLL~~gAd~n~~d~~g~t~~L~~Aa~~~~~e~v~lLl~~Ga~in~~~~~~-~~l------~  231 (284)
T PHA02791        159 ILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDLEMLQALFKYDINIYSVNLEN-VLL------D  231 (284)
T ss_pred             cCccHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCccCcccC-ccC------C
Confidence            47899999999999999999999999999999999987 999999999999999999999999999854 655      8


Q ss_pred             CHHHHHHHHhCcCCCCCc
Q psy904          326 HVKAVRWMVNHVAQFPSD  343 (596)
Q Consensus       326 ~~~iv~~Ll~~~~~~~~~  343 (596)
                      +.+++++||++.+++..+
T Consensus       232 ~~e~~~~ll~~~~~~~~~  249 (284)
T PHA02791        232 DAEIAKMIIEKHVEYKSD  249 (284)
T ss_pred             CHHHHHHHHHhhhhhccc
Confidence            899999999998876554


No 27 
>PHA02875 ankyrin repeat protein; Provisional
Probab=100.00  E-value=7.3e-36  Score=316.08  Aligned_cols=295  Identities=24%  Similarity=0.317  Sum_probs=213.9

Q ss_pred             ChHHHHHHHCCcHHHHHHHHhCCCCccCCCCCCCcHHHHHHhcCCHHHHHHHHhCCCCccccCCCCCCCcHHHHHHHcCC
Q psy904           79 DTPLSLACSGGRYEVVELLLTRGANKEHRNVSDYTPLSLAASGGYVNIIKLLLTHGAEINSRTGSKLGISPLMLAAMNGH  158 (596)
Q Consensus        79 ~t~L~~A~~~g~~eivk~LL~~g~~~~~~d~~g~t~L~~A~~~g~~eiv~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~g~  158 (596)
                      .++|+.|+..|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|+++|++++....+  +.||||.|+..|+
T Consensus         3 ~~~L~~A~~~g~~~iv~~Ll~~g~~~n~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~--~~t~L~~A~~~g~   80 (413)
T PHA02875          3 QVALCDAILFGELDIARRLLDIGINPNFEIYDGISPIKLAMKFRDSEAIKLLMKHGAIPDVKYPD--IESELHDAVEEGD   80 (413)
T ss_pred             chHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCccccCCC--cccHHHHHHHCCC
Confidence            46777777777777777777777777777777777777777777777777777777766554333  6678888888888


Q ss_pred             HHHHHHHHhcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccCCCChHHHHHHhcCcHHHHHHHHhCCCC
Q psy904          159 TAAVKLLLDMGSDINAQIETNRNTALTLACFQGRHEVVSLLLDRKANVEHRAKTGLTPLMEAASGGYVEVGRVLLDKGAD  238 (596)
Q Consensus       159 ~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~  238 (596)
                      .+++++|++.|.......+..|.||||+|+..++.+++++|++.|++++..+..|.||||+|+..|+.+++++|+++|++
T Consensus        81 ~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~gad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~~  160 (413)
T PHA02875         81 VKAVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKAC  160 (413)
T ss_pred             HHHHHHHHHcCCcccccccCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCC
Confidence            88888888877766655556678888888888888888888888888888888888888888888888888888888888


Q ss_pred             CCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCC-hHHHHHHhcCcHHHHHHHHHCCCCcccC---CCCC
Q psy904          239 VNAPPVPSSRDTALTIAADKGHCRFVELLLSKGAQVEVKNKKGN-SPLWLAANGGHLSVVELLCKHGADIDSQ---DNRK  314 (596)
Q Consensus       239 ~~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~g~di~~~d~~g~-TpL~~A~~~g~~~iv~~Ll~~gad~~~~---~~~g  314 (596)
                      ++.  .+..|.||||+|+..|+.+++++|+++|++++..+..|. ||||+|+..|+.+++++|+++|+|++..   +..+
T Consensus       161 ~~~--~d~~g~TpL~~A~~~g~~eiv~~Ll~~ga~~n~~~~~~~~t~l~~A~~~~~~~iv~~Ll~~gad~n~~~~~~~~~  238 (413)
T PHA02875        161 LDI--EDCCGCTPLIIAMAKGDIAICKMLLDSGANIDYFGKNGCVAALCYAIENNKIDIVRLFIKRGADCNIMFMIEGEE  238 (413)
T ss_pred             CCC--CCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHHCCcCcchHhhcCCCc
Confidence            776  557788888888888888888888888888888887764 7888888888888888888888888754   5667


Q ss_pred             CCHHHHHHHc---CCHHHHHHHHhCc-----CC-CCCchHHHHHHhhc-CcHHHHHhhhhhhHHHHHHhhHHH
Q psy904          315 VSCLMAAFRK---GHVKAVRWMVNHV-----AQ-FPSDQEMTRYIQTV-NDKELLDKCQECSMVIRVAKNQQA  377 (596)
Q Consensus       315 ~t~L~~A~~~---g~~~iv~~Ll~~~-----~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~  377 (596)
                      .||++++...   ...+++..|+.+.     .. +.....+..-+..+ ....+......|...|...+....
T Consensus       239 ~t~l~~~~~~~~~~~~~~~~~li~~i~~~~~~~~~~~~~~~~~n~~~i~~~~~l~~~~~~C~~ei~~mk~~~i  311 (413)
T PHA02875        239 CTILDMICNMCTNLESEAIDALIADIAIRIHKKTIRRDEGFKNNMSTIEDKEEFKDVFEKCIIELRRIKSEKI  311 (413)
T ss_pred             hHHHHHHHhhcCCcccHHHHHHHHHHHHHhCcccccchhcccccHHHhcChHHHHHHHHHHHHHHHHHHhhcc
Confidence            7888776533   3345555554321     11 11111111111122 223344455677777777766443


No 28 
>PHA02792 ankyrin-like protein; Provisional
Probab=100.00  E-value=8.2e-36  Score=314.29  Aligned_cols=329  Identities=16%  Similarity=0.113  Sum_probs=254.0

Q ss_pred             cCCCCCcHHH-HHHhcCcHHHHHHHHHCCCCccccCCCCCcHHHHHHH-cCCHHHHHHHHhCCCCccc------------
Q psy904            7 TESNHDTALT-LACAGGHEELVELLLSRGADIEHRDKKGFTPLILAAT-AGHDKVVDILLNHKADMEA------------   72 (596)
Q Consensus         7 ~d~~g~t~L~-~A~~~g~~~ivk~Ll~~g~~i~~~d~~g~t~L~~A~~-~g~~eiv~~Ll~~~~~~~~------------   72 (596)
                      .+-+|.++|| .|+..|++++|++|+++|+++|..+..|.+|+|+|+. .|+.+++++|+++|+++..            
T Consensus        67 ~n~~~~~~~~~~~s~n~~lElvk~LI~~GAdvN~~~n~~~~~l~ya~~~~~~~eivk~Ll~~Gad~~~~~~~g~~~~~~~  146 (631)
T PHA02792         67 KNINDFDIFEYLCSDNIDIELLKLLISKGLEINSIKNGINIVEKYATTSNPNVDVFKLLLDKGIPTCSNIQYGYKIIIEQ  146 (631)
T ss_pred             CccCCccHHHHHHHhcccHHHHHHHHHcCCCcccccCCCCcceeEeecCCCChHHHHHHHHCCCCcccccccCcchhhhh
Confidence            4556777887 4556889999999999999999999989999999966 6899999999999986321            


Q ss_pred             -----------------------cccCCCChHHHHHHHCC-------cHHHHHHHHhCCCCccCCCCCCCcHHHHHHhcC
Q psy904           73 -----------------------QSERTKDTPLSLACSGG-------RYEVVELLLTRGANKEHRNVSDYTPLSLAASGG  122 (596)
Q Consensus        73 -----------------------~~~~~~~t~L~~A~~~g-------~~eivk~LL~~g~~~~~~d~~g~t~L~~A~~~g  122 (596)
                                             ..+..|.||||+|+.++       +.++++.|+++|++++..|..|.||||+|+...
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~t~L~~~i~~~s~~~~~~~~~v~k~Li~~g~~~~~~d~~g~t~l~~~~~~~  226 (631)
T PHA02792        147 ITRAEYYNWDDELDDYDYDYTTDYDDRMGKTVLYYYIITRSQDGYATSLDVINYLISHEKEMRYYTYREHTTLYYYVDKC  226 (631)
T ss_pred             cccccccchhhhccccccccccccCCCCCCchHHHHHhhCCcccccCCHHHHHHHHhCCCCcCccCCCCChHHHHHHHcc
Confidence                                   12345789999999888       789999999999999989989999999999888


Q ss_pred             --CHHHHHHHHhCCCCccccCCCCCCCcHHHHHH--Hc----CCH--HHHHHHHhcCC--CcccccccCC----------
Q psy904          123 --YVNIIKLLLTHGAEINSRTGSKLGISPLMLAA--MN----GHT--AAVKLLLDMGS--DINAQIETNR----------  180 (596)
Q Consensus       123 --~~eiv~~Ll~~g~~~~~~~~~~~g~t~L~~A~--~~----g~~--eiv~~Ll~~~~--~~~~~~~~~~----------  180 (596)
                        ..+++++|+........      ....|+--.  +.    +++  .+|..|++.+.  ++........          
T Consensus       227 ~i~~ei~~~L~~~~~~~~~------~~~~l~~y~~~~~~~~~~~id~~iv~~ll~~~~~~~i~~~~~~~~~~~~~~~~~~  300 (631)
T PHA02792        227 DIKREIFDALFDSNYSGNE------LMNILSNYLRKQYRNKNHKIDNYIVDKLLSGHDTFYILELCNSLRNNIIISSILK  300 (631)
T ss_pred             cchHHHHHHHHhccccccc------hHhHHHHHHHHHhccCccCccHHHHHHHHhCCCccchhhhhhhhhhhhHHHHHHH
Confidence              78899999875221111      112222211  11    223  37777777654  2111100000          


Q ss_pred             ------CcHHHHHHHcC--CHHHHHHHHhcCCCcccccCCCChHHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCCCcHH
Q psy904          181 ------NTALTLACFQG--RHEVVSLLLDRKANVEHRAKTGLTPLMEAASGGYVEVGRVLLDKGADVNAPPVPSSRDTAL  252 (596)
Q Consensus       181 ------~t~L~~A~~~~--~~~ii~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~g~t~L  252 (596)
                            ...||.-..++  +.+++++|++.|++...  ..+..+++.|+..|+.+++++|+++|++++.......+.|||
T Consensus       301 ~~~~~~q~~l~~Yl~~~~v~ieiIK~LId~Ga~~~r--~~~~n~~~~Aa~~gn~eIVelLIs~GADIN~kD~~g~~~TpL  378 (631)
T PHA02792        301 RYTDSIQDLLSEYVSYHTVYINVIKCMIDEGATLYR--FKHINKYFQKFDNRDPKVVEYILKNGNVVVEDDDNIINIMPL  378 (631)
T ss_pred             HHhHHHHHHHHHHHhcCCccHHHHHHHHHCCCcccc--CCcchHHHHHHHcCCHHHHHHHHHcCCchhhhcCCCCChhHH
Confidence                  12445555555  67899999999998752  235567899999999999999999999998865444567999


Q ss_pred             HHHHHcCcH---HHHHHHHHCCCCCCCCCCCCChHHHHHHhcCcHHHHHHHHHCCCCcccCCCCCCCHHHHHHH------
Q psy904          253 TIAADKGHC---RFVELLLSKGAQVEVKNKKGNSPLWLAANGGHLSVVELLCKHGADIDSQDNRKVSCLMAAFR------  323 (596)
Q Consensus       253 ~~A~~~~~~---~iv~~Ll~~g~di~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~~~~g~t~L~~A~~------  323 (596)
                      |+|+.....   .++++|+++|+|+|.+|..|.||||+|+..++.+++++|+++|++++..+..|.|||++|+.      
T Consensus       379 h~A~~n~~~~v~~IlklLIs~GADIN~kD~~G~TPLh~Aa~~~n~eivelLLs~GADIN~kD~~G~TpL~~A~~~~~~~~  458 (631)
T PHA02792        379 FPTLSIHESDVLSILKLCKPYIDDINKIDKHGRSILYYCIESHSVSLVEWLIDNGADINITTKYGSTCIGICVILAHACI  458 (631)
T ss_pred             HHHHHhccHhHHHHHHHHHhcCCccccccccCcchHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHHHhccc
Confidence            998876654   46899999999999999999999999999999999999999999999999999999999976      


Q ss_pred             ----cCCHHHHHHHHhCcCCCCCc
Q psy904          324 ----KGHVKAVRWMVNHVAQFPSD  343 (596)
Q Consensus       324 ----~g~~~iv~~Ll~~~~~~~~~  343 (596)
                          .....++++|+++|+.+..-
T Consensus       459 ~~i~~~~~~il~lLLs~~p~i~~i  482 (631)
T PHA02792        459 PEIAELYIKILEIILSKLPTIECI  482 (631)
T ss_pred             HHHHHHHHHHHHHHHhcCCChhHH
Confidence                22356799999999876643


No 29 
>PHA02798 ankyrin-like protein; Provisional
Probab=100.00  E-value=1.5e-35  Score=319.48  Aligned_cols=281  Identities=18%  Similarity=0.257  Sum_probs=238.5

Q ss_pred             cHHHHHHHHHCCCCccccCCCCCcHHHHHHHc--CCHHHHHHHHhCCCCccccccCCCChHHHHHHHC-----CcHHHHH
Q psy904           23 HEELVELLLSRGADIEHRDKKGFTPLILAATA--GHDKVVDILLNHKADMEAQSERTKDTPLSLACSG-----GRYEVVE   95 (596)
Q Consensus        23 ~~~ivk~Ll~~g~~i~~~d~~g~t~L~~A~~~--g~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~~~-----g~~eivk   95 (596)
                      .+++|+.|++.+. ++.. ..|.|+++.+...  ++.++|++|+++|++++.. +..|.||||.|+.+     ++.++++
T Consensus        17 ~~~~v~~ll~~~~-~~~~-~~~~~~~~~yl~~~~~~~~iv~~Ll~~Gadvn~~-d~~g~TpL~~~~~n~~~~~~~~~iv~   93 (489)
T PHA02798         17 KLSTVKLLIKSCN-PNEI-VNEYSIFQKYLQRDSPSTDIVKLFINLGANVNGL-DNEYSTPLCTILSNIKDYKHMLDIVK   93 (489)
T ss_pred             cHHHHHHHHhcCC-hhhh-cccchHHHHHHhCCCCCHHHHHHHHHCCCCCCCC-CCCCCChHHHHHHhHHhHHhHHHHHH
Confidence            4789999998653 4433 4567777655544  4889999999999998865 56799999998864     6789999


Q ss_pred             HHHhCCCCccCCCCCCCcHHHHHHhcC---CHHHHHHHHhCCCCccccCCCCCCCcHHHHHHHcCC---HHHHHHHHhcC
Q psy904           96 LLLTRGANKEHRNVSDYTPLSLAASGG---YVNIIKLLLTHGAEINSRTGSKLGISPLMLAAMNGH---TAAVKLLLDMG  169 (596)
Q Consensus        96 ~LL~~g~~~~~~d~~g~t~L~~A~~~g---~~eiv~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~g~---~eiv~~Ll~~~  169 (596)
                      +|+++|++++..+..|.||||+|+.++   +.+++++|+++|++++..+..  |.||||+|+..|+   .+++++|++.|
T Consensus        94 ~Ll~~GadiN~~d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~Gadvn~~d~~--g~tpL~~a~~~~~~~~~~vv~~Ll~~g  171 (489)
T PHA02798         94 ILIENGADINKKNSDGETPLYCLLSNGYINNLEILLFMIENGADTTLLDKD--GFTMLQVYLQSNHHIDIEIIKLLLEKG  171 (489)
T ss_pred             HHHHCCCCCCCCCCCcCcHHHHHHHcCCcChHHHHHHHHHcCCCccccCCC--CCcHHHHHHHcCCcchHHHHHHHHHhC
Confidence            999999999999999999999999876   789999999999998877654  9999999999988   99999999999


Q ss_pred             CCcccccccCCCcHHHHHHHc----CCHHHHHHHHhcCCCcccccCCCChHHH-------HHHhcCcHHHHHHHHhCCCC
Q psy904          170 SDINAQIETNRNTALTLACFQ----GRHEVVSLLLDRKANVEHRAKTGLTPLM-------EAASGGYVEVGRVLLDKGAD  238 (596)
Q Consensus       170 ~~~~~~~~~~~~t~L~~A~~~----~~~~ii~~Ll~~g~~~~~~~~~g~t~L~-------~A~~~g~~~iv~~Ll~~g~~  238 (596)
                      ++++...+..+.||||.++..    ++.+++++|+++|++++..+..|.++++       .+...+...++.+|+. +++
T Consensus       172 adin~~~~~~~~t~Lh~~~~~~~~~~~~~ivk~Li~~Ga~i~~~~~~~~~~~~~~l~~l~~~~~~~~~~i~~~l~~-~~d  250 (489)
T PHA02798        172 VDINTHNNKEKYDTLHCYFKYNIDRIDADILKLFVDNGFIINKENKSHKKKFMEYLNSLLYDNKRFKKNILDFIFS-YID  250 (489)
T ss_pred             CCcccccCcCCCcHHHHHHHhccccCCHHHHHHHHHCCCCcccCCccccchHHHHHHHHHhhcccchHHHHHHHHh-cCC
Confidence            999887666788999998764    4789999999999999988888888876       2344567788888766 577


Q ss_pred             CCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCChHHHHHHhcCcHHHHHHHHHCCCCcccCC
Q psy904          239 VNAPPVPSSRDTALTIAADKGHCRFVELLLSKGAQVEVKNKKGNSPLWLAANGGHLSVVELLCKHGADIDSQD  311 (596)
Q Consensus       239 ~~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~g~di~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~~  311 (596)
                      +|.  .+..|.||||+|+..|+.+++++|+++|+|++.+|..|.||||+|+..|+.++++.|+++|++++...
T Consensus       251 vN~--~d~~G~TPL~~A~~~~~~~~v~~LL~~GAdin~~d~~G~TpL~~A~~~~~~~iv~~lL~~~~~~~~i~  321 (489)
T PHA02798        251 INQ--VDELGFNPLYYSVSHNNRKIFEYLLQLGGDINIITELGNTCLFTAFENESKFIFNSILNKKPNKNTIS  321 (489)
T ss_pred             CCC--cCcCCccHHHHHHHcCcHHHHHHHHHcCCcccccCCCCCcHHHHHHHcCcHHHHHHHHccCCCHHHHH
Confidence            776  56789999999999999999999999999999999999999999999999999999999999887543


No 30 
>PHA02791 ankyrin-like protein; Provisional
Probab=100.00  E-value=3e-35  Score=289.65  Aligned_cols=236  Identities=19%  Similarity=0.194  Sum_probs=173.2

Q ss_pred             cCcHHHHHHHHHCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccccCCCChHHHHHHHCCcHHHHHHHHhC
Q psy904           21 GGHEELVELLLSRGADIEHRDKKGFTPLILAATAGHDKVVDILLNHKADMEAQSERTKDTPLSLACSGGRYEVVELLLTR  100 (596)
Q Consensus        21 ~g~~~ivk~Ll~~g~~i~~~d~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~~~g~~eivk~LL~~  100 (596)
                      .++.+++++|++.|++  ..|..|.||||+|+..|+.+++++|+++|++++..   .+.||||+|+..|+.++|++|+.+
T Consensus         9 ~~~~~~~~~Lis~~a~--~~D~~G~TpLh~Aa~~g~~eiv~~Ll~~ga~~n~~---d~~TpLh~Aa~~g~~eiV~lLL~~   83 (284)
T PHA02791          9 WKSKQLKSFLSSKDAF--KADVHGHSALYYAIADNNVRLVCTLLNAGALKNLL---ENEFPLHQAATLEDTKIVKILLFS   83 (284)
T ss_pred             cCHHHHHHHHHhCCCC--CCCCCCCcHHHHHHHcCCHHHHHHHHHCcCCCcCC---CCCCHHHHHHHCCCHHHHHHHHHC
Confidence            5678899999998874  57888999999999999999999999998877653   367899999999999999999999


Q ss_pred             CCCccCCCCCCCcHHHHHHhcCCHHHHHHHHhCCCCccccCCCCCC-CcHHHHHHHcCCHHHHHHHHhcCCCcccccccC
Q psy904          101 GANKEHRNVSDYTPLSLAASGGYVNIIKLLLTHGAEINSRTGSKLG-ISPLMLAAMNGHTAAVKLLLDMGSDINAQIETN  179 (596)
Q Consensus       101 g~~~~~~d~~g~t~L~~A~~~g~~eiv~~Ll~~g~~~~~~~~~~~g-~t~L~~A~~~g~~eiv~~Ll~~~~~~~~~~~~~  179 (596)
                      |++++..|..|.||||+|+..|+.+++++|+.+|++++.....  | .||||+|+..|+.+++++|+.++++..   +  
T Consensus        84 Gadvn~~d~~G~TpLh~Aa~~g~~eivk~Ll~~gadin~~~~~--g~~TpL~~Aa~~g~~eivk~LL~~~~~~~---d--  156 (284)
T PHA02791         84 GMDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKT--GWKTSFYHAVMLNDVSIVSYFLSEIPSTF---D--  156 (284)
T ss_pred             CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccCCC--CCcHHHHHHHHcCCHHHHHHHHhcCCccc---c--
Confidence            9888888888888888888888888888888888777654332  4 367777777777777777766543211   0  


Q ss_pred             CCcHHHHHHHcCCHHHHHHHHhcCCCcccccCCCChHHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCCCcH-HHHHHHc
Q psy904          180 RNTALTLACFQGRHEVVSLLLDRKANVEHRAKTGLTPLMEAASGGYVEVGRVLLDKGADVNAPPVPSSRDTA-LTIAADK  258 (596)
Q Consensus       180 ~~t~L~~A~~~~~~~ii~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~g~t~-L~~A~~~  258 (596)
                                                    ...|.||||+|+..|+.+++++|+++|++++.  .+..|.|| ||+|+..
T Consensus       157 ------------------------------~~~g~TpLh~Aa~~g~~eiv~lLL~~gAd~n~--~d~~g~t~~L~~Aa~~  204 (284)
T PHA02791        157 ------------------------------LAILLSCIHITIKNGHVDMMILLLDYMTSTNT--NNSLLFIPDIKLAIDN  204 (284)
T ss_pred             ------------------------------cccCccHHHHHHHcCCHHHHHHHHHCCCCCCc--ccCCCCChHHHHHHHc
Confidence                                          01245666666666666666666666666665  33455554 7777777


Q ss_pred             CcHHHHHHHHHCCCCCCCCCCCCChHHHHHHhcCcHHHHHHHHHCCCCc
Q psy904          259 GHCRFVELLLSKGAQVEVKNKKGNSPLWLAANGGHLSVVELLCKHGADI  307 (596)
Q Consensus       259 ~~~~iv~~Ll~~g~di~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~  307 (596)
                      |+.++|++|+++|++++.+|..| |||      |+.+++++||++-++.
T Consensus       205 ~~~e~v~lLl~~Ga~in~~~~~~-~~l------~~~e~~~~ll~~~~~~  246 (284)
T PHA02791        205 KDLEMLQALFKYDINIYSVNLEN-VLL------DDAEIAKMIIEKHVEY  246 (284)
T ss_pred             CCHHHHHHHHHCCCCCccCcccC-ccC------CCHHHHHHHHHhhhhh
Confidence            77777777777777777777643 555      6777777777765554


No 31 
>PHA02798 ankyrin-like protein; Provisional
Probab=100.00  E-value=6.7e-35  Score=314.35  Aligned_cols=277  Identities=18%  Similarity=0.276  Sum_probs=241.2

Q ss_pred             CHHHHHHHHhCCCCccccccCCCChHHHHHHH--CCcHHHHHHHHhCCCCccCCCCCCCcHHHHHHhc-----CCHHHHH
Q psy904           56 HDKVVDILLNHKADMEAQSERTKDTPLSLACS--GGRYEVVELLLTRGANKEHRNVSDYTPLSLAASG-----GYVNIIK  128 (596)
Q Consensus        56 ~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~~--~g~~eivk~LL~~g~~~~~~d~~g~t~L~~A~~~-----g~~eiv~  128 (596)
                      .+++|+.|+..+. ++..  ..+.|+++.+..  .++.++|++|+++|++++..+..|.||||.|+.+     +..++++
T Consensus        17 ~~~~v~~ll~~~~-~~~~--~~~~~~~~~yl~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpL~~~~~n~~~~~~~~~iv~   93 (489)
T PHA02798         17 KLSTVKLLIKSCN-PNEI--VNEYSIFQKYLQRDSPSTDIVKLFINLGANVNGLDNEYSTPLCTILSNIKDYKHMLDIVK   93 (489)
T ss_pred             cHHHHHHHHhcCC-hhhh--cccchHHHHHHhCCCCCHHHHHHHHHCCCCCCCCCCCCCChHHHHHHhHHhHHhHHHHHH
Confidence            5689999998753 3322  346677764443  4589999999999999999999999999999865     6789999


Q ss_pred             HHHhCCCCccccCCCCCCCcHHHHHHHcC---CHHHHHHHHhcCCCcccccccCCCcHHHHHHHcCC---HHHHHHHHhc
Q psy904          129 LLLTHGAEINSRTGSKLGISPLMLAAMNG---HTAAVKLLLDMGSDINAQIETNRNTALTLACFQGR---HEVVSLLLDR  202 (596)
Q Consensus       129 ~Ll~~g~~~~~~~~~~~g~t~L~~A~~~g---~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~---~~ii~~Ll~~  202 (596)
                      +|+++|++++..+..  |.||||+|+.++   +.+++++|+++|++++.. +..|.||||+|+..++   .+++++|++.
T Consensus        94 ~Ll~~GadiN~~d~~--G~TpLh~a~~~~~~~~~~iv~~Ll~~Gadvn~~-d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~  170 (489)
T PHA02798         94 ILIENGADINKKNSD--GETPLYCLLSNGYINNLEILLFMIENGADTTLL-DKDGFTMLQVYLQSNHHIDIEIIKLLLEK  170 (489)
T ss_pred             HHHHCCCCCCCCCCC--cCcHHHHHHHcCCcChHHHHHHHHHcCCCcccc-CCCCCcHHHHHHHcCCcchHHHHHHHHHh
Confidence            999999999887654  999999999986   789999999999999886 7889999999999988   9999999999


Q ss_pred             CCCccccc-CCCChHHHHHHhc----CcHHHHHHHHhCCCCCCCCCCCCCCCcHHH-------HHHHcCcHHHHHHHHHC
Q psy904          203 KANVEHRA-KTGLTPLMEAASG----GYVEVGRVLLDKGADVNAPPVPSSRDTALT-------IAADKGHCRFVELLLSK  270 (596)
Q Consensus       203 g~~~~~~~-~~g~t~L~~A~~~----g~~~iv~~Ll~~g~~~~~~~~~~~g~t~L~-------~A~~~~~~~iv~~Ll~~  270 (596)
                      |++++..+ ..|.||||.++..    ++.+++++|+++|++++.  .+..|.++++       .+...++..++.+|+. 
T Consensus       171 gadin~~~~~~~~t~Lh~~~~~~~~~~~~~ivk~Li~~Ga~i~~--~~~~~~~~~~~~l~~l~~~~~~~~~~i~~~l~~-  247 (489)
T PHA02798        171 GVDINTHNNKEKYDTLHCYFKYNIDRIDADILKLFVDNGFIINK--ENKSHKKKFMEYLNSLLYDNKRFKKNILDFIFS-  247 (489)
T ss_pred             CCCcccccCcCCCcHHHHHHHhccccCCHHHHHHHHHCCCCccc--CCccccchHHHHHHHHHhhcccchHHHHHHHHh-
Confidence            99999875 5789999998764    479999999999999887  4456777766       2344567888988876 


Q ss_pred             CCCCCCCCCCCChHHHHHHhcCcHHHHHHHHHCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHhCcCCCC
Q psy904          271 GAQVEVKNKKGNSPLWLAANGGHLSVVELLCKHGADIDSQDNRKVSCLMAAFRKGHVKAVRWMVNHVAQFP  341 (596)
Q Consensus       271 g~di~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~  341 (596)
                      |+|+|.+|..|.||||+|+..|+.+++++|+++|+|++.+|..|.|||++|+..++..+++.|+++++++.
T Consensus       248 ~~dvN~~d~~G~TPL~~A~~~~~~~~v~~LL~~GAdin~~d~~G~TpL~~A~~~~~~~iv~~lL~~~~~~~  318 (489)
T PHA02798        248 YIDINQVDELGFNPLYYSVSHNNRKIFEYLLQLGGDINIITELGNTCLFTAFENESKFIFNSILNKKPNKN  318 (489)
T ss_pred             cCCCCCcCcCCccHHHHHHHcCcHHHHHHHHHcCCcccccCCCCCcHHHHHHHcCcHHHHHHHHccCCCHH
Confidence            59999999999999999999999999999999999999999999999999999999999999999998765


No 32 
>PHA02875 ankyrin repeat protein; Provisional
Probab=100.00  E-value=2.7e-34  Score=304.14  Aligned_cols=242  Identities=26%  Similarity=0.348  Sum_probs=170.4

Q ss_pred             CCcHHHHHHhcCcHHHHHHHHHCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccccCCCChHHHHHHHCCc
Q psy904           11 HDTALTLACAGGHEELVELLLSRGADIEHRDKKGFTPLILAATAGHDKVVDILLNHKADMEAQSERTKDTPLSLACSGGR   90 (596)
Q Consensus        11 g~t~L~~A~~~g~~~ivk~Ll~~g~~i~~~d~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~~~g~   90 (596)
                      +.++||.|+..|++++|++|++.|++++..+..|.||||+|+..|+.+++++|+++|++++.. +..+.||||+|+..|+
T Consensus         2 ~~~~L~~A~~~g~~~iv~~Ll~~g~~~n~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~-~~~~~t~L~~A~~~g~   80 (413)
T PHA02875          2 DQVALCDAILFGELDIARRLLDIGINPNFEIYDGISPIKLAMKFRDSEAIKLLMKHGAIPDVK-YPDIESELHDAVEEGD   80 (413)
T ss_pred             CchHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCcccc-CCCcccHHHHHHHCCC
Confidence            578999999999999999999999999999889999999999999999999999999876543 3467789999999999


Q ss_pred             HHHHHHHHhCCCCcc-CCCCCCCcHHHHHHhcCCHHHHHHHHhCCCCccccCCCCCCCcHHHHHHHcCCHHHHHHHHhcC
Q psy904           91 YEVVELLLTRGANKE-HRNVSDYTPLSLAASGGYVNIIKLLLTHGAEINSRTGSKLGISPLMLAAMNGHTAAVKLLLDMG  169 (596)
Q Consensus        91 ~eivk~LL~~g~~~~-~~d~~g~t~L~~A~~~g~~eiv~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~g~~eiv~~Ll~~~  169 (596)
                      .++|++|++.|..+. ..+..|.||||+|+..|+.+++++|+++|++++.....  |.||||+|+..|+.+++++|+++|
T Consensus        81 ~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~gad~~~~~~~--g~tpLh~A~~~~~~~~v~~Ll~~g  158 (413)
T PHA02875         81 VKAVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIARGADPDIPNTD--KFSPLHLAVMMGDIKGIELLIDHK  158 (413)
T ss_pred             HHHHHHHHHcCCcccccccCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCC--CCCHHHHHHHcCCHHHHHHHHhcC
Confidence            999999988887653 33456777777777777777777777777766654432  666666666666666666666666


Q ss_pred             CCcccccccCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccCCC-ChHHHHHHhcCcHHHHHHHHhCCCCCCCCC-CCCC
Q psy904          170 SDINAQIETNRNTALTLACFQGRHEVVSLLLDRKANVEHRAKTG-LTPLMEAASGGYVEVGRVLLDKGADVNAPP-VPSS  247 (596)
Q Consensus       170 ~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~g~~~~~~~~~g-~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~-~~~~  247 (596)
                      ++++.. +..|.||||+|+..|+.+++++|++.|++++..+..| .||+|+|+..|+.+++++|+++|++++... .+..
T Consensus       159 ~~~~~~-d~~g~TpL~~A~~~g~~eiv~~Ll~~ga~~n~~~~~~~~t~l~~A~~~~~~~iv~~Ll~~gad~n~~~~~~~~  237 (413)
T PHA02875        159 ACLDIE-DCCGCTPLIIAMAKGDIAICKMLLDSGANIDYFGKNGCVAALCYAIENNKIDIVRLFIKRGADCNIMFMIEGE  237 (413)
T ss_pred             CCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHHCCcCcchHhhcCCC
Confidence            655544 4455566666666666666666666666665555444 355555666666666666666665555421 2334


Q ss_pred             CCcHHHHHH
Q psy904          248 RDTALTIAA  256 (596)
Q Consensus       248 g~t~L~~A~  256 (596)
                      +.|||+.++
T Consensus       238 ~~t~l~~~~  246 (413)
T PHA02875        238 ECTILDMIC  246 (413)
T ss_pred             chHHHHHHH
Confidence            455555544


No 33 
>KOG0508|consensus
Probab=100.00  E-value=3.1e-34  Score=280.67  Aligned_cols=190  Identities=36%  Similarity=0.507  Sum_probs=169.2

Q ss_pred             cCCCCCcHHHHHHhcCcHHHHHHHHH-CCCCcc--------ccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccccCC
Q psy904            7 TESNHDTALTLACAGGHEELVELLLS-RGADIE--------HRDKKGFTPLILAATAGHDKVVDILLNHKADMEAQSERT   77 (596)
Q Consensus         7 ~d~~g~t~L~~A~~~g~~~ivk~Ll~-~g~~i~--------~~d~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~~~~~~~~   77 (596)
                      ...+|-|||..||.+|+.++|+||++ .++++.        -....|-+||-.|+..||+++|+.|+.+|++++.. ...
T Consensus        38 ~~~~g~tPL~iaaRnGH~~vVeyLle~~~a~~e~~GsV~FDge~IegappLWaAsaAGHl~vVk~L~~~ga~VN~t-T~T  116 (615)
T KOG0508|consen   38 EVQNGGTPLLIAARNGHADVVEYLLEHCRASPEQGGSVRFDGETIEGAPPLWAASAAGHLEVVKLLLRRGASVNDT-TRT  116 (615)
T ss_pred             cccCCCCceeeehhcCcHHHHHHHHHHhcCCccCCceEEeCCcccCCCchhhHHhccCcHHHHHHHHHhcCccccc-ccc
Confidence            35678899999999999999999999 477653        33466888999999999999999999999887764 345


Q ss_pred             CChHHHHHHHCCcHHHHHHHHhCCCCccCCCCCCCcHHHHHHhcCCHHHHHHHHhCCCCccccCCCCCCCcHHHHHHHcC
Q psy904           78 KDTPLSLACSGGRYEVVELLLTRGANKEHRNVSDYTPLSLAASGGYVNIIKLLLTHGAEINSRTGSKLGISPLMLAAMNG  157 (596)
Q Consensus        78 ~~t~L~~A~~~g~~eivk~LL~~g~~~~~~d~~g~t~L~~A~~~g~~eiv~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~g  157 (596)
                      ..|||-.||..|++++|+||+++|++++..|..|.|.|++|+..|+.+|+++|++.|++++.....  |.|+||.++..|
T Consensus       117 NStPLraACfDG~leivKyLvE~gad~~IanrhGhTcLmIa~ykGh~~I~qyLle~gADvn~ks~k--GNTALH~caEsG  194 (615)
T KOG0508|consen  117 NSTPLRAACFDGHLEIVKYLVEHGADPEIANRHGHTCLMIACYKGHVDIAQYLLEQGADVNAKSYK--GNTALHDCAESG  194 (615)
T ss_pred             CCccHHHHHhcchhHHHHHHHHcCCCCcccccCCCeeEEeeeccCchHHHHHHHHhCCCcchhccc--CchHHHhhhhcc
Confidence            669999999999999999999999999999999999999999999999999999999999887644  999999999999


Q ss_pred             CHHHHHHHHhcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHh
Q psy904          158 HTAAVKLLLDMGSDINAQIETNRNTALTLACFQGRHEVVSLLLD  201 (596)
Q Consensus       158 ~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~  201 (596)
                      +++++++|+.+|+.+..  +..|.|||..|...|..+++.+|+.
T Consensus       195 ~vdivq~Ll~~ga~i~~--d~~GmtPL~~Aa~tG~~~iVe~L~~  236 (615)
T KOG0508|consen  195 SVDIVQLLLKHGAKIDV--DGHGMTPLLLAAVTGHTDIVERLLQ  236 (615)
T ss_pred             cHHHHHHHHhCCceeee--cCCCCchHHHHhhhcchHHHHHHhc
Confidence            99999999999997764  4568999999999999999999996


No 34 
>KOG0508|consensus
Probab=100.00  E-value=3.5e-33  Score=273.30  Aligned_cols=215  Identities=35%  Similarity=0.504  Sum_probs=189.1

Q ss_pred             HHHHhcCcHHHHHHHHHCCCC-----ccccCCCCCcHHHHHHHcCCHHHHHHHHhC-CCCccc-------cccCCCChHH
Q psy904           16 TLACAGGHEELVELLLSRGAD-----IEHRDKKGFTPLILAATAGHDKVVDILLNH-KADMEA-------QSERTKDTPL   82 (596)
Q Consensus        16 ~~A~~~g~~~ivk~Ll~~g~~-----i~~~d~~g~t~L~~A~~~g~~eiv~~Ll~~-~~~~~~-------~~~~~~~t~L   82 (596)
                      ..|+..|.+..+..|+.+..+     +-....+|-|||.+|+++|+.++|+||+++ ++++..       -....|.+||
T Consensus         9 ~naa~~g~l~~l~~ll~~~s~~ei~~l~~~~~~g~tPL~iaaRnGH~~vVeyLle~~~a~~e~~GsV~FDge~IegappL   88 (615)
T KOG0508|consen    9 INAARDGKLQLLAKLLINSSNEEIISLIGEVQNGGTPLLIAARNGHADVVEYLLEHCRASPEQGGSVRFDGETIEGAPPL   88 (615)
T ss_pred             HHHhhhhhHHHHHHHHhCCchHHHHHHhccccCCCCceeeehhcCcHHHHHHHHHHhcCCccCCceEEeCCcccCCCchh
Confidence            378899999988888876432     223446788999999999999999999994 333221       1124577899


Q ss_pred             HHHHHCCcHHHHHHHHhCCCCccCCCCCCCcHHHHHHhcCCHHHHHHHHhCCCCccccCCCCCCCcHHHHHHHcCCHHHH
Q psy904           83 SLACSGGRYEVVELLLTRGANKEHRNVSDYTPLSLAASGGYVNIIKLLLTHGAEINSRTGSKLGISPLMLAAMNGHTAAV  162 (596)
Q Consensus        83 ~~A~~~g~~eivk~LL~~g~~~~~~d~~g~t~L~~A~~~g~~eiv~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~g~~eiv  162 (596)
                      -.|+-.||+++|+.|+.+|+++|.......|||-.||.-|++++++||+++|+++.+....  |.|+||+||..|+.+|+
T Consensus        89 WaAsaAGHl~vVk~L~~~ga~VN~tT~TNStPLraACfDG~leivKyLvE~gad~~Ianrh--GhTcLmIa~ykGh~~I~  166 (615)
T KOG0508|consen   89 WAASAAGHLEVVKLLLRRGASVNDTTRTNSTPLRAACFDGHLEIVKYLVEHGADPEIANRH--GHTCLMIACYKGHVDIA  166 (615)
T ss_pred             hHHhccCcHHHHHHHHHhcCccccccccCCccHHHHHhcchhHHHHHHHHcCCCCcccccC--CCeeEEeeeccCchHHH
Confidence            9999999999999999999999999999999999999999999999999999999887754  99999999999999999


Q ss_pred             HHHHhcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccCCCChHHHHHHhcCcHHHHHHHHh
Q psy904          163 KLLLDMGSDINAQIETNRNTALTLACFQGRHEVVSLLLDRKANVEHRAKTGLTPLMEAASGGYVEVGRVLLD  234 (596)
Q Consensus       163 ~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~  234 (596)
                      ++|++.|++++.. ...|+|+||.|+..|+++++++|+.+|+.+.. |..|.|||..|+..|+.++|.+|+.
T Consensus       167 qyLle~gADvn~k-s~kGNTALH~caEsG~vdivq~Ll~~ga~i~~-d~~GmtPL~~Aa~tG~~~iVe~L~~  236 (615)
T KOG0508|consen  167 QYLLEQGADVNAK-SYKGNTALHDCAESGSVDIVQLLLKHGAKIDV-DGHGMTPLLLAAVTGHTDIVERLLQ  236 (615)
T ss_pred             HHHHHhCCCcchh-cccCchHHHhhhhcccHHHHHHHHhCCceeee-cCCCCchHHHHhhhcchHHHHHHhc
Confidence            9999999999987 78899999999999999999999999998875 5669999999999999999999994


No 35 
>KOG4412|consensus
Probab=100.00  E-value=1.9e-33  Score=242.34  Aligned_cols=206  Identities=31%  Similarity=0.387  Sum_probs=169.6

Q ss_pred             CcHHHHHHhcCCHHHHHHHHhCCC-CccccCCCCCCCcHHHHHHHcCCHHHHHHHHh-cCCCcccccccCCCcHHHHHHH
Q psy904          112 YTPLSLAASGGYVNIIKLLLTHGA-EINSRTGSKLGISPLMLAAMNGHTAAVKLLLD-MGSDINAQIETNRNTALTLACF  189 (596)
Q Consensus       112 ~t~L~~A~~~g~~eiv~~Ll~~g~-~~~~~~~~~~g~t~L~~A~~~g~~eiv~~Ll~-~~~~~~~~~~~~~~t~L~~A~~  189 (596)
                      .++.+.++......-++-+++..+ .++.... ..|+||||+||..|+.+++.+|+. -+..++.. +..|+||||+|+.
T Consensus         4 ~~~~~~~~~~~~~~kveel~~s~~kSL~~r~d-qD~Rt~LHwa~S~g~~eiv~fLlsq~nv~~ddk-DdaGWtPlhia~s   81 (226)
T KOG4412|consen    4 ASLGKAICENCEEFKVEELIQSDPKSLNARDD-QDGRTPLHWACSFGHVEIVYFLLSQPNVKPDDK-DDAGWTPLHIAAS   81 (226)
T ss_pred             cchHHHHHhhchHHHHHHHHhcChhhhhcccc-ccCCceeeeeeecCchhHHHHHHhcCCCCCCCc-cccCCchhhhhhh
Confidence            345555555555555555665544 3333332 237888888888888888888884 45555655 7788899999999


Q ss_pred             cCCHHHHHHHHhc-CCCcccccCCCChHHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHH
Q psy904          190 QGRHEVVSLLLDR-KANVEHRAKTGLTPLMEAASGGYVEVGRVLLDKGADVNAPPVPSSRDTALTIAADKGHCRFVELLL  268 (596)
Q Consensus       190 ~~~~~ii~~Ll~~-g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll  268 (596)
                      .|+.++|+.|+.. |+++|..+..|.|+||+|+..|.++|+++|+++|+.+++  .+..|.||||-|+..|.+.+++||+
T Consensus        82 ~g~~evVk~Ll~r~~advna~tn~G~T~LHyAagK~r~eIaqlLle~ga~i~~--kD~~~qtplHRAAavGklkvie~Li  159 (226)
T KOG4412|consen   82 NGNDEVVKELLNRSGADVNATTNGGQTCLHYAAGKGRLEIAQLLLEKGALIRI--KDKQGQTPLHRAAAVGKLKVIEYLI  159 (226)
T ss_pred             cCcHHHHHHHhcCCCCCcceecCCCcceehhhhcCChhhHHHHHHhcCCCCcc--cccccCchhHHHHhccchhhHHHHH
Confidence            9999999999988 999999999999999999999999999999999988887  6688999999999999999999999


Q ss_pred             HCCCCCCCCCCCCChHHHHHHhcCcHHHHHHHHHCCCCcccCCCCCCCHHHHHH
Q psy904          269 SKGAQVEVKNKKGNSPLWLAANGGHLSVVELLCKHGADIDSQDNRKVSCLMAAF  322 (596)
Q Consensus       269 ~~g~di~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~~~~g~t~L~~A~  322 (596)
                      ..|+.+|..|..|+||||+|..-|+.++..+|+++||+++..|+.| ||+..|.
T Consensus       160 ~~~a~~n~qDk~G~TpL~~al~e~~~d~a~lLV~~gAd~~~edke~-t~~~~a~  212 (226)
T KOG4412|consen  160 SQGAPLNTQDKYGFTPLHHALAEGHPDVAVLLVRAGADTDREDKEG-TALRIAC  212 (226)
T ss_pred             hcCCCCCcccccCccHHHHHHhccCchHHHHHHHhccceeeccccC-chHHHHH
Confidence            9999999999999999999988889999999999999999999988 9987764


No 36 
>PHA02792 ankyrin-like protein; Provisional
Probab=100.00  E-value=1.3e-31  Score=282.51  Aligned_cols=328  Identities=16%  Similarity=0.149  Sum_probs=227.5

Q ss_pred             CCccCCCCCcHHHHHHhcCc-HHHHHHHHHCCCCccccCCCCCcHHHHH-HHcCCHHHHHHHHhCCCCccccccCCCChH
Q psy904            4 DSETESNHDTALTLACAGGH-EELVELLLSRGADIEHRDKKGFTPLILA-ATAGHDKVVDILLNHKADMEAQSERTKDTP   81 (596)
Q Consensus         4 ~~~~d~~g~t~L~~A~~~g~-~~ivk~Ll~~g~~i~~~d~~g~t~L~~A-~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~   81 (596)
                      +.....+|.||||.-....+ ..-++.++..|.+++..+.+|.+++|+- ..+|+.++|++|+.+|++++...+ .+.+|
T Consensus        30 ~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~s~n~~lElvk~LI~~GAdvN~~~n-~~~~~  108 (631)
T PHA02792         30 NPLYEYDGETPLKAYVTKKNNNIKNDVVILLLSSVDYKNINDFDIFEYLCSDNIDIELLKLLISKGLEINSIKN-GINIV  108 (631)
T ss_pred             CcccccCCCccHHHHHhhhhhhHHHHHHHHHHhCCCcCccCCccHHHHHHHhcccHHHHHHHHHcCCCcccccC-CCCcc
Confidence            33445677788887765554 3345566666777788888888888764 456788999999999988887654 47788


Q ss_pred             HHHHHH-CCcHHHHHHHHhCCCCccC------------------------------------CCCCCCcHHHHHHhcC--
Q psy904           82 LSLACS-GGRYEVVELLLTRGANKEH------------------------------------RNVSDYTPLSLAASGG--  122 (596)
Q Consensus        82 L~~A~~-~g~~eivk~LL~~g~~~~~------------------------------------~d~~g~t~L~~A~~~g--  122 (596)
                      +++|+. .++.+++++||+.|+++..                                    .|..|.||||+|+.++  
T Consensus       109 l~ya~~~~~~~eivk~Ll~~Gad~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~t~L~~~i~~~s~  188 (631)
T PHA02792        109 EKYATTSNPNVDVFKLLLDKGIPTCSNIQYGYKIIIEQITRAEYYNWDDELDDYDYDYTTDYDDRMGKTVLYYYIITRSQ  188 (631)
T ss_pred             eeEeecCCCChHHHHHHHHCCCCcccccccCcchhhhhcccccccchhhhccccccccccccCCCCCCchHHHHHhhCCc
Confidence            888865 6889999999988876432                                    2234566666666666  


Q ss_pred             -----CHHHHHHHHhCCCCccccCCCCCCCcHHHHHHHcC--CHHHHHHHHhcCCCcccccccCCCcHHHHHH--Hc---
Q psy904          123 -----YVNIIKLLLTHGAEINSRTGSKLGISPLMLAAMNG--HTAAVKLLLDMGSDINAQIETNRNTALTLAC--FQ---  190 (596)
Q Consensus       123 -----~~eiv~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~g--~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~--~~---  190 (596)
                           +.++++.|+++|++++..+..  |.||||+|+...  +.+++++|+....+..   ..  ...|..-.  ..   
T Consensus       189 ~~~~~~~~v~k~Li~~g~~~~~~d~~--g~t~l~~~~~~~~i~~ei~~~L~~~~~~~~---~~--~~~l~~y~~~~~~~~  261 (631)
T PHA02792        189 DGYATSLDVINYLISHEKEMRYYTYR--EHTTLYYYVDKCDIKREIFDALFDSNYSGN---EL--MNILSNYLRKQYRNK  261 (631)
T ss_pred             ccccCCHHHHHHHHhCCCCcCccCCC--CChHHHHHHHcccchHHHHHHHHhcccccc---ch--HhHHHHHHHHHhccC
Confidence                 566666666666666555433  666666666666  5666666665311110   00  11111111  11   


Q ss_pred             -C--CHHHHHHHHhcCCCccc------ccC-------------CCChHHHHHHhcC--cHHHHHHHHhCCCCCCCCCCCC
Q psy904          191 -G--RHEVVSLLLDRKANVEH------RAK-------------TGLTPLMEAASGG--YVEVGRVLLDKGADVNAPPVPS  246 (596)
Q Consensus       191 -~--~~~ii~~Ll~~g~~~~~------~~~-------------~g~t~L~~A~~~g--~~~iv~~Ll~~g~~~~~~~~~~  246 (596)
                       .  +..+|..|++.+.....      .+.             .-+-.||.-...+  +.+++++|+++|++++-    .
T Consensus       262 ~~~id~~iv~~ll~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~q~~l~~Yl~~~~v~ieiIK~LId~Ga~~~r----~  337 (631)
T PHA02792        262 NHKIDNYIVDKLLSGHDTFYILELCNSLRNNIIISSILKRYTDSIQDLLSEYVSYHTVYINVIKCMIDEGATLYR----F  337 (631)
T ss_pred             ccCccHHHHHHHHhCCCccchhhhhhhhhhhhHHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHCCCcccc----C
Confidence             1  12356666654331100      000             0112345455555  67899999999998752    2


Q ss_pred             CCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCC--ChHHHHHHhcCcH---HHHHHHHHCCCCcccCCCCCCCHHHHH
Q psy904          247 SRDTALTIAADKGHCRFVELLLSKGAQVEVKNKKG--NSPLWLAANGGHL---SVVELLCKHGADIDSQDNRKVSCLMAA  321 (596)
Q Consensus       247 ~g~t~L~~A~~~~~~~iv~~Ll~~g~di~~~d~~g--~TpL~~A~~~g~~---~iv~~Ll~~gad~~~~~~~g~t~L~~A  321 (596)
                      ....+++.|+..|+.++|++|+++|+|++..|..|  .||||+|+..+..   .++++|+.+|+|++.+|..|.||||+|
T Consensus       338 ~~~n~~~~Aa~~gn~eIVelLIs~GADIN~kD~~g~~~TpLh~A~~n~~~~v~~IlklLIs~GADIN~kD~~G~TPLh~A  417 (631)
T PHA02792        338 KHINKYFQKFDNRDPKVVEYILKNGNVVVEDDDNIINIMPLFPTLSIHESDVLSILKLCKPYIDDINKIDKHGRSILYYC  417 (631)
T ss_pred             CcchHHHHHHHcCCHHHHHHHHHcCCchhhhcCCCCChhHHHHHHHhccHhHHHHHHHHHhcCCccccccccCcchHHHH
Confidence            35567999999999999999999999999999875  6999998876654   468899999999999999999999999


Q ss_pred             HHcCCHHHHHHHHhCcCCCCCc
Q psy904          322 FRKGHVKAVRWMVNHVAQFPSD  343 (596)
Q Consensus       322 ~~~g~~~iv~~Ll~~~~~~~~~  343 (596)
                      +..++.+++++|+++|+++...
T Consensus       418 a~~~n~eivelLLs~GADIN~k  439 (631)
T PHA02792        418 IESHSVSLVEWLIDNGADINIT  439 (631)
T ss_pred             HHcCCHHHHHHHHHCCCCCCCc
Confidence            9999999999999999987644


No 37 
>KOG4412|consensus
Probab=99.98  E-value=7e-32  Score=232.62  Aligned_cols=106  Identities=34%  Similarity=0.449  Sum_probs=52.5

Q ss_pred             CCcHHHHHHHcCCHHHHHHHHhcCCCcccccCCCChHHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHcC
Q psy904          180 RNTALTLACFQGRHEVVSLLLDRKANVEHRAKTGLTPLMEAASGGYVEVGRVLLDKGADVNAPPVPSSRDTALTIAADKG  259 (596)
Q Consensus       180 ~~t~L~~A~~~~~~~ii~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~  259 (596)
                      |.||||+|+..|.++|.++|+++|+.++..|..|.||||.|+.-|.+.++.+|+..|+.+|.  .+..|.||||.|...|
T Consensus       106 G~T~LHyAagK~r~eIaqlLle~ga~i~~kD~~~qtplHRAAavGklkvie~Li~~~a~~n~--qDk~G~TpL~~al~e~  183 (226)
T KOG4412|consen  106 GQTCLHYAAGKGRLEIAQLLLEKGALIRIKDKQGQTPLHRAAAVGKLKVIEYLISQGAPLNT--QDKYGFTPLHHALAEG  183 (226)
T ss_pred             CcceehhhhcCChhhHHHHHHhcCCCCcccccccCchhHHHHhccchhhHHHHHhcCCCCCc--ccccCccHHHHHHhcc
Confidence            33444444444444444444444444444455555555555555555555555555544444  3344555555554444


Q ss_pred             cHHHHHHHHHCCCCCCCCCCCCChHHHHH
Q psy904          260 HCRFVELLLSKGAQVEVKNKKGNSPLWLA  288 (596)
Q Consensus       260 ~~~iv~~Ll~~g~di~~~d~~g~TpL~~A  288 (596)
                      +.++..+|+.+|++++..|+.| ||+-.|
T Consensus       184 ~~d~a~lLV~~gAd~~~edke~-t~~~~a  211 (226)
T KOG4412|consen  184 HPDVAVLLVRAGADTDREDKEG-TALRIA  211 (226)
T ss_pred             CchHHHHHHHhccceeeccccC-chHHHH
Confidence            5555555555555555555544 554444


No 38 
>KOG4369|consensus
Probab=99.97  E-value=9.3e-33  Score=291.61  Aligned_cols=374  Identities=32%  Similarity=0.415  Sum_probs=314.4

Q ss_pred             ccccccCCCChHHHHHHHCCcHHHHHHHHhCCCCccCCCCCCCcHHHHHHhcCCHHHHHHHHhCCCCccccCCCCCCCcH
Q psy904           70 MEAQSERTKDTPLSLACSGGRYEVVELLLTRGANKEHRNVSDYTPLSLAASGGYVNIIKLLLTHGAEINSRTGSKLGISP  149 (596)
Q Consensus        70 ~~~~~~~~~~t~L~~A~~~g~~eivk~LL~~g~~~~~~d~~g~t~L~~A~~~g~~eiv~~Ll~~g~~~~~~~~~~~g~t~  149 (596)
                      ++.....+..|+|..||.+||.++|++|+..|+++.++|..|++||.+|+..||..+|+.|+.+.+++..-. +..+.|+
T Consensus       749 id~~Te~n~~t~LT~acaggh~e~vellv~rganiehrdkkgf~plImaatagh~tvV~~llk~ha~veaQs-drtkdt~  827 (2131)
T KOG4369|consen  749 IDPLTEPNIKTNLTSACAGGHREEVELLVVRGANIEHRDKKGFVPLIMAATAGHITVVQDLLKAHADVEAQS-DRTKDTM  827 (2131)
T ss_pred             eccccCccccccccccccCccHHHHHHHHHhcccccccccccchhhhhhcccCchHHHHHHHhhhhhhhhhc-ccccCce
Confidence            334445567799999999999999999999999999999999999999999999999999999988887544 3447899


Q ss_pred             HHHHHHcCCHHHHHHHHhcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHhcCCCccccc--CCCChHHHHHHhcCcHH
Q psy904          150 LMLAAMNGHTAAVKLLLDMGSDINAQIETNRNTALTLACFQGRHEVVSLLLDRKANVEHRA--KTGLTPLMEAASGGYVE  227 (596)
Q Consensus       150 L~~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~g~~~~~~~--~~g~t~L~~A~~~g~~~  227 (596)
                      |.+||..|..+++.+||..|++-... +....|||.+|...|+..+|..|+..|..++.+.  ..|-+||++|..+|+..
T Consensus       828 lSlacsggr~~vvelLl~~gankehr-nvsDytPlsla~Sggy~~iI~~llS~GseInSrtgSklgisPLmlatmngh~~  906 (2131)
T KOG4369|consen  828 LSLACSGGRTRVVELLLNAGANKEHR-NVSDYTPLSLARSGGYTKIIHALLSSGSEINSRTGSKLGISPLMLATMNGHQA  906 (2131)
T ss_pred             EEEecCCCcchHHHHHHHhhcccccc-chhhcCchhhhcCcchHHHHHHHhhcccccccccccccCcchhhhhhhccccH
Confidence            99999999999999999999986665 4555699999999999999999999999998875  56889999999999999


Q ss_pred             HHHHHHhCCCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCChHHHHHHhcCcHHHHHHHHHCCCCc
Q psy904          228 VGRVLLDKGADVNAPPVPSSRDTALTIAADKGHCRFVELLLSKGAQVEVKNKKGNSPLWLAANGGHLSVVELLCKHGADI  307 (596)
Q Consensus       228 iv~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~g~di~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~  307 (596)
                      .+..|++.|.|+|.. +..+.+|+|.+|+..|+.++|.+||.+.+++.++-+.|.|||+-++..|.+++-.+||..|+|+
T Consensus       907 at~~ll~~gsdiNaq-IeTNrnTaltla~fqgr~evv~lLLa~~anvehRaktgltplme~AsgGyvdvg~~li~~gad~  985 (2131)
T KOG4369|consen  907 ATLSLLQPGSDINAQ-IETNRNTALTLALFQGRPEVVFLLLAAQANVEHRAKTGLTPLMEMASGGYVDVGNLLIAAGADT  985 (2131)
T ss_pred             HHHHHhcccchhccc-cccccccceeeccccCcchHHHHHHHHhhhhhhhcccCCcccchhhcCCccccchhhhhccccc
Confidence            999999999999986 6788999999999999999999999999999999999999999999999999999999999998


Q ss_pred             ccCC--CCCCCHHHHHHHcCCHHHHHHHHhCcCCCCCchHHHHHHhhcCcHHHHHhhhhhhHHHHHHhhHHHHHhhhhHH
Q psy904          308 DSQD--NRKVSCLMAAFRKGHVKAVRWMVNHVAQFPSDQEMTRYIQTVNDKELLDKCQECSMVIRVAKNQQAERANKNAN  385 (596)
Q Consensus       308 ~~~~--~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  385 (596)
                      |...  ....|+|.+++..||..+|..|++..+....+..-                 .|..++.++.....    ....
T Consensus       986 nasPvp~T~dtalti~a~kGh~kfv~~lln~~atv~v~Nkk-----------------G~T~Lwla~~Gg~l----ss~~ 1044 (2131)
T KOG4369|consen  986 NASPVPNTWDTALTIPANKGHTKFVPKLLNGDATVRVPNKK-----------------GCTVLWLASAGGAL----SSCP 1044 (2131)
T ss_pred             ccCCCCCcCCccceeecCCCchhhhHHhhCCccceecccCC-----------------CCcccchhccCCcc----ccch
Confidence            8543  45669999999999999999999865543332210                 12222211111100    1111


Q ss_pred             HHHH---hhhHHHHHHHHHHHHHHHHHHHHHHHHHH-------------------HHHHHHHHHHHHHHHHHHHHHHHHH
Q psy904          386 ILLE---ELDMEKWREESKRAAQARKRERKKQKKLE-------------------KKEEKRKAMEEEEEVIRVAKNQQAE  443 (596)
Q Consensus       386 ~l~~---e~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~e~~~k~~e~~e~~~~~~~~~~~  443 (596)
                      +|.+   ..++...+...+.+.++||.+.+..+++.                   ...+...+|..|...++..++.|+.
T Consensus      1045 il~~~~ad~d~qdnr~~S~~maafRKgh~~iVk~mv~~atqfps~q~~ir~~~Tvss~~i~~kc~~c~~i~rSakqAQa~ 1124 (2131)
T KOG4369|consen 1045 ILVSSVADADQQDNRTNSRTMAAFRKGHFAIVKKMVPPATQFPSVQSTIRSLPTVSSAPITSKCAPCTFIPRSAKQAQAS 1124 (2131)
T ss_pred             HHhhcccChhhhhcccccccHHHHHhchhheeccccCchhcCCcHHHHHHhcccccccchhccccchhhhhhhhHHHHHH
Confidence            1111   45666788888999999999988877653                   1345677999999999999999999


Q ss_pred             HHHHhHhHHHHHHHHHHHHHHHHH
Q psy904          444 RANKNANILLEELDMEKWREESKR  467 (596)
Q Consensus       444 ~~~~~~~~~~~~~~~~~~~~e~~~  467 (596)
                      .++.++.++++..++|+-++|.++
T Consensus      1125 sa~~~a~~lle~~dee~s~qe~~~ 1148 (2131)
T KOG4369|consen 1125 SAKMEAFSLLEPTDEEVSTQEQPM 1148 (2131)
T ss_pred             Hhhhhhhhcccchhhhhhhhhhhh
Confidence            999999999999999998888876


No 39 
>KOG0509|consensus
Probab=99.97  E-value=2.4e-30  Score=264.69  Aligned_cols=210  Identities=32%  Similarity=0.445  Sum_probs=200.6

Q ss_pred             CcHHHHHHhcCcHHHHHHHHHC-CCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccccCCCChHHHHHHHCCc
Q psy904           12 DTALTLACAGGHEELVELLLSR-GADIEHRDKKGFTPLILAATAGHDKVVDILLNHKADMEAQSERTKDTPLSLACSGGR   90 (596)
Q Consensus        12 ~t~L~~A~~~g~~~ivk~Ll~~-g~~i~~~d~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~~~g~   90 (596)
                      ...+..|+.+|.++.|+.|++. |.+++..|.+|.|+||+|+.+++++++++|+++|++++......+.||||+|+++|+
T Consensus        45 ~~~~v~A~q~G~l~~v~~lve~~g~~v~~~D~~g~tlLHWAAiNNrl~v~r~li~~gadvn~~gG~l~stPLHWAar~G~  124 (600)
T KOG0509|consen   45 LDDIVKATQYGELETVKELVESEGESVNNPDREGVTLLHWAAINNRLDVARYLISHGADVNAIGGVLGSTPLHWAARNGH  124 (600)
T ss_pred             hhhhhhHhhcchHHHHHHHHhhcCcCCCCCCcCCccceeHHHHcCcHHHHHHHHHcCCCccccCCCCCCCcchHHHHcCc
Confidence            4567899999999999999999 999999999999999999999999999999999999999887889999999999999


Q ss_pred             HHHHHHHHhCCCCccCCCCCCCcHHHHHHhcCCHHHHHHHHhCCCCccccCCCCCCCcHHHHHHHcCCHHHHHHHHhcCC
Q psy904           91 YEVVELLLTRGANKEHRNVSDYTPLSLAASGGYVNIIKLLLTHGAEINSRTGSKLGISPLMLAAMNGHTAAVKLLLDMGS  170 (596)
Q Consensus        91 ~eivk~LL~~g~~~~~~d~~g~t~L~~A~~~g~~eiv~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~  170 (596)
                      +.+|.+|+++|++++.+|..|.+|||.|+..|++-+|-|||..|++++.++.+  |+||||+|+..|+...+..|+..|+
T Consensus       125 ~~vv~lLlqhGAdpt~~D~~G~~~lHla~~~~~~~~vayll~~~~d~d~~D~~--grTpLmwAaykg~~~~v~~LL~f~a  202 (600)
T KOG0509|consen  125 ISVVDLLLQHGADPTLKDKQGLTPLHLAAQFGHTALVAYLLSKGADIDLRDNN--GRTPLMWAAYKGFALFVRRLLKFGA  202 (600)
T ss_pred             HHHHHHHHHcCCCCceecCCCCcHHHHHHHhCchHHHHHHHHhcccCCCcCCC--CCCHHHHHHHhcccHHHHHHHHhcc
Confidence            99999999999999999999999999999999999999999999988888765  9999999999999988999999999


Q ss_pred             CcccccccCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccCCCChHHHHHHhc
Q psy904          171 DINAQIETNRNTALTLACFQGRHEVVSLLLDRKANVEHRAKTGLTPLMEAASG  223 (596)
Q Consensus       171 ~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~g~~~~~~~~~g~t~L~~A~~~  223 (596)
                      .+....+..|+||||+|+..|+..++..|++.|++.+..+.+|.||+.+|...
T Consensus       203 ~~~~~d~~~g~TpLHwa~~~gN~~~v~Ll~~g~~~~d~~~~~g~tp~~LA~~~  255 (600)
T KOG0509|consen  203 SLLLTDDNHGNTPLHWAVVGGNLTAVKLLLEGGADLDKTNTNGKTPFDLAQER  255 (600)
T ss_pred             cccccccccCCchHHHHHhcCCcceEehhhhcCCcccccccCCCCHHHHHHHh
Confidence            99998889999999999999999999988888899999999999999999766


No 40 
>KOG0509|consensus
Probab=99.97  E-value=7.7e-30  Score=261.01  Aligned_cols=208  Identities=33%  Similarity=0.454  Sum_probs=110.3

Q ss_pred             hHHHHHHHCCcHHHHHHHHhC-CCCccCCCCCCCcHHHHHHhcCCHHHHHHHHhCCCCccccCCCCCCCcHHHHHHHcCC
Q psy904           80 TPLSLACSGGRYEVVELLLTR-GANKEHRNVSDYTPLSLAASGGYVNIIKLLLTHGAEINSRTGSKLGISPLMLAAMNGH  158 (596)
Q Consensus        80 t~L~~A~~~g~~eivk~LL~~-g~~~~~~d~~g~t~L~~A~~~g~~eiv~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~g~  158 (596)
                      +.++.|+..|.++.|+.|++. |.+++..|..|.|+||.|+.+++++++++|+++|+++|.... ..+.||||+|+++|+
T Consensus        46 ~~~v~A~q~G~l~~v~~lve~~g~~v~~~D~~g~tlLHWAAiNNrl~v~r~li~~gadvn~~gG-~l~stPLHWAar~G~  124 (600)
T KOG0509|consen   46 DDIVKATQYGELETVKELVESEGESVNNPDREGVTLLHWAAINNRLDVARYLISHGADVNAIGG-VLGSTPLHWAARNGH  124 (600)
T ss_pred             hhhhhHhhcchHHHHHHHHhhcCcCCCCCCcCCccceeHHHHcCcHHHHHHHHHcCCCccccCC-CCCCCcchHHHHcCc
Confidence            455666666666666666666 666666666666666666666666666666666666555543 234455555555555


Q ss_pred             HHHHHHHHhcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccCCCChHHHHHHhcCcHHHHHHHHhCCCC
Q psy904          159 TAAVKLLLDMGSDINAQIETNRNTALTLACFQGRHEVVSLLLDRKANVEHRAKTGLTPLMEAASGGYVEVGRVLLDKGAD  238 (596)
Q Consensus       159 ~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~  238 (596)
                      +.++.+|+++|++++.. |..|.+|||+|+..++.-++-+|+.+|++++.+|..|.||||+|+..|+...+..|+.-|+.
T Consensus       125 ~~vv~lLlqhGAdpt~~-D~~G~~~lHla~~~~~~~~vayll~~~~d~d~~D~~grTpLmwAaykg~~~~v~~LL~f~a~  203 (600)
T KOG0509|consen  125 ISVVDLLLQHGADPTLK-DKQGLTPLHLAAQFGHTALVAYLLSKGADIDLRDNNGRTPLMWAAYKGFALFVRRLLKFGAS  203 (600)
T ss_pred             HHHHHHHHHcCCCCcee-cCCCCcHHHHHHHhCchHHHHHHHHhcccCCCcCCCCCCHHHHHHHhcccHHHHHHHHhccc
Confidence            55555555555555443 44445555555555555555555555555555555555555555555444444444444444


Q ss_pred             CCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCChHHHHHHh
Q psy904          239 VNAPPVPSSRDTALTIAADKGHCRFVELLLSKGAQVEVKNKKGNSPLWLAAN  290 (596)
Q Consensus       239 ~~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~g~di~~~d~~g~TpL~~A~~  290 (596)
                      ++.. .+..|+||||+|+..|+..++.+|++.|++.+..|.+|.||+.+|..
T Consensus       204 ~~~~-d~~~g~TpLHwa~~~gN~~~v~Ll~~g~~~~d~~~~~g~tp~~LA~~  254 (600)
T KOG0509|consen  204 LLLT-DDNHGNTPLHWAVVGGNLTAVKLLLEGGADLDKTNTNGKTPFDLAQE  254 (600)
T ss_pred             cccc-ccccCCchHHHHHhcCCcceEehhhhcCCcccccccCCCCHHHHHHH
Confidence            4432 12444455555555555444444444444444444444555444443


No 41 
>PHA02795 ankyrin-like protein; Provisional
Probab=99.96  E-value=2e-27  Score=242.53  Aligned_cols=231  Identities=18%  Similarity=0.151  Sum_probs=158.1

Q ss_pred             HHHHhCCCCccCCCCCCCcHHHHHHhcCCHHHHHHHHhCCCCcccc----CCCCCCCcHHHHHHH--cCCHHHHHHHHhc
Q psy904           95 ELLLTRGANKEHRNVSDYTPLSLAASGGYVNIIKLLLTHGAEINSR----TGSKLGISPLMLAAM--NGHTAAVKLLLDM  168 (596)
Q Consensus        95 k~LL~~g~~~~~~d~~g~t~L~~A~~~g~~eiv~~Ll~~g~~~~~~----~~~~~g~t~L~~A~~--~g~~eiv~~Ll~~  168 (596)
                      +||+.+|++++....++     +|+..+..+++++|+++|++++..    .....+.|+||.++.  +|+.+++++|+.+
T Consensus        66 ~~~~~~~~~i~~~~~~~-----~~~~~~~k~~~~~l~s~~~~~~~~~~~~~~~~~~~~~L~~~~~n~~n~~eiV~~LI~~  140 (437)
T PHA02795         66 DYFRIHRDNIDQYIVDR-----LFAYITYKDIISALVSKNYMEDIFSIIIKNCNSVQDLLLYYLSNAYVEIDIVDFMVDH  140 (437)
T ss_pred             HHHHHcCcchhhhhhhh-----HHhhcchHHHHHHHHhcccccchhhhhhhccccccHHHHHHHHhcCCCHHHHHHHHHC
Confidence            55666666555555444     555666666666666666665410    122235566666666  5666666666666


Q ss_pred             CCCcccccccCCCcHHHHHHHcCCHHHHHHHHhcCCCcccc------cCCCChHHHHHHhcCcHHHHHHHHhCCCCCCCC
Q psy904          169 GSDINAQIETNRNTALTLACFQGRHEVVSLLLDRKANVEHR------AKTGLTPLMEAASGGYVEVGRVLLDKGADVNAP  242 (596)
Q Consensus       169 ~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~g~~~~~~------~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~  242 (596)
                      |++++..   .+.||||.|+..++.+++++|+++|++....      +..+.+++|.|...++.+++++|+++|+++|. 
T Consensus       141 GADIn~~---~~~t~lh~A~~~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~GADIN~-  216 (437)
T PHA02795        141 GAVIYKI---ECLNAYFRGICKKESSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPYIEDINQ-  216 (437)
T ss_pred             CCCCCCC---CCCCHHHHHHHcCcHHHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHHHHHhCcCCcCc-
Confidence            6666542   2346666666666666666666666532211      13466888888888899999999999988887 


Q ss_pred             CCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCChHHHHHHhcCc--------HHHHHHHHHCCCCcccCCCCC
Q psy904          243 PVPSSRDTALTIAADKGHCRFVELLLSKGAQVEVKNKKGNSPLWLAANGGH--------LSVVELLCKHGADIDSQDNRK  314 (596)
Q Consensus       243 ~~~~~g~t~L~~A~~~~~~~iv~~Ll~~g~di~~~d~~g~TpL~~A~~~g~--------~~iv~~Ll~~gad~~~~~~~g  314 (596)
                       .+..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+        .+++++|+++|++++....  
T Consensus       217 -kD~~G~TpLh~Aa~~g~~eiVelLL~~GAdIN~~d~~G~TpLh~Aa~~g~~~~~~~~~~eIvelLL~~gadI~~~~~--  293 (437)
T PHA02795        217 -LDAGGRTLLYRAIYAGYIDLVSWLLENGANVNAVMSNGYTCLDVAVDRGSVIARRETHLKILEILLREPLSIDCIKL--  293 (437)
T ss_pred             -CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCcccccccHHHHHHHHHhCCCCCCchhH--
Confidence             56788899999999999999999999999999999999999999998874        6899999999988876443  


Q ss_pred             CCHHHHHHHcCCHHHHHHHHhCcCCC
Q psy904          315 VSCLMAAFRKGHVKAVRWMVNHVAQF  340 (596)
Q Consensus       315 ~t~L~~A~~~g~~~iv~~Ll~~~~~~  340 (596)
                       |++..  ...+.++++.|+.++..+
T Consensus       294 -~~~~~--~~~n~~~ik~lI~y~~~l  316 (437)
T PHA02795        294 -AILNN--TIENHDVIKLCIKYFMMV  316 (437)
T ss_pred             -Hhhhc--ccchHHHHHHHHHHHHhc
Confidence             22221  112678888888776544


No 42 
>PHA02795 ankyrin-like protein; Provisional
Probab=99.95  E-value=3.3e-27  Score=240.95  Aligned_cols=208  Identities=14%  Similarity=0.141  Sum_probs=184.9

Q ss_pred             HHHHHHhCCCCccccCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcc------cccccCCCcHHHHHHH--cCCHHHHH
Q psy904          126 IIKLLLTHGAEINSRTGSKLGISPLMLAAMNGHTAAVKLLLDMGSDIN------AQIETNRNTALTLACF--QGRHEVVS  197 (596)
Q Consensus       126 iv~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~~------~~~~~~~~t~L~~A~~--~~~~~ii~  197 (596)
                      +.++++.+|++++....+  +     +|+..+..+++++|+.+|++++      . .+..+.|+||.++.  +|+.++++
T Consensus        64 ~~~~~~~~~~~i~~~~~~--~-----~~~~~~~k~~~~~l~s~~~~~~~~~~~~~-~~~~~~~~L~~~~~n~~n~~eiV~  135 (437)
T PHA02795         64 LYDYFRIHRDNIDQYIVD--R-----LFAYITYKDIISALVSKNYMEDIFSIIIK-NCNSVQDLLLYYLSNAYVEIDIVD  135 (437)
T ss_pred             HHHHHHHcCcchhhhhhh--h-----HHhhcchHHHHHHHHhcccccchhhhhhh-ccccccHHHHHHHHhcCCCHHHHH
Confidence            468899999999877654  2     8889999999999999999977      3 35567899999999  89999999


Q ss_pred             HHHhcCCCcccccCCCChHHHHHHhcCcHHHHHHHHhCCCCCCCC-CC---CCCCCcHHHHHHHcCcHHHHHHHHHCCCC
Q psy904          198 LLLDRKANVEHRAKTGLTPLMEAASGGYVEVGRVLLDKGADVNAP-PV---PSSRDTALTIAADKGHCRFVELLLSKGAQ  273 (596)
Q Consensus       198 ~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~-~~---~~~g~t~L~~A~~~~~~~iv~~Ll~~g~d  273 (596)
                      +|+++|++++..  .+.||||.|+..|+.+++++|+++|++.+.. ..   ...+.+++|.|+..++.+++++|+++|++
T Consensus       136 ~LI~~GADIn~~--~~~t~lh~A~~~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~GAD  213 (437)
T PHA02795        136 FMVDHGAVIYKI--ECLNAYFRGICKKESSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPYIED  213 (437)
T ss_pred             HHHHCCCCCCCC--CCCCHHHHHHHcCcHHHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHHHHHhCcCC
Confidence            999999999874  4589999999999999999999999854321 11   13477999999999999999999999999


Q ss_pred             CCCCCCCCChHHHHHHhcCcHHHHHHHHHCCCCcccCCCCCCCHHHHHHHcC--------CHHHHHHHHhCcCCCCCc
Q psy904          274 VEVKNKKGNSPLWLAANGGHLSVVELLCKHGADIDSQDNRKVSCLMAAFRKG--------HVKAVRWMVNHVAQFPSD  343 (596)
Q Consensus       274 i~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~~~~g~t~L~~A~~~g--------~~~iv~~Ll~~~~~~~~~  343 (596)
                      +|.+|..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|        +.+++++|+.+|+++..-
T Consensus       214 IN~kD~~G~TpLh~Aa~~g~~eiVelLL~~GAdIN~~d~~G~TpLh~Aa~~g~~~~~~~~~~eIvelLL~~gadI~~~  291 (437)
T PHA02795        214 INQLDAGGRTLLYRAIYAGYIDLVSWLLENGANVNAVMSNGYTCLDVAVDRGSVIARRETHLKILEILLREPLSIDCI  291 (437)
T ss_pred             cCcCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCcccccccHHHHHHHHHhCCCCCCch
Confidence            9999999999999999999999999999999999999999999999999998        469999999999987764


No 43 
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.95  E-value=1.3e-26  Score=220.33  Aligned_cols=174  Identities=16%  Similarity=0.212  Sum_probs=150.2

Q ss_pred             CCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCcHHHHHHHcC--CHHHHHHHHhcCCCccccc-CCCChHHHHHHh
Q psy904          146 GISPLMLAAMNGHTAAVKLLLDMGSDINAQIETNRNTALTLACFQG--RHEVVSLLLDRKANVEHRA-KTGLTPLMEAAS  222 (596)
Q Consensus       146 g~t~L~~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~--~~~ii~~Ll~~g~~~~~~~-~~g~t~L~~A~~  222 (596)
                      +.+||+.|+..|+.++|+.|+....   . .+..|.||||+|+..+  +.+++++|++.|++++..+ ..|.||||+|+.
T Consensus        21 ~~~pL~~A~~~~~~~~vk~Li~~~n---~-~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~~~~~~g~TpLh~a~~   96 (209)
T PHA02859         21 YCNPLFYYVEKDDIEGVKKWIKFVN---D-CNDLYETPIFSCLEKDKVNVEILKFLIENGADVNFKTRDNNLSALHHYLS   96 (209)
T ss_pred             cCcHHHHHHHhCcHHHHHHHHHhhh---c-cCccCCCHHHHHHHcCCCCHHHHHHHHHCCCCCCccCCCCCCCHHHHHHH
Confidence            5688999999999999988887532   2 2566889999998754  8899999999999999886 479999999875


Q ss_pred             c---CcHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHH--cCcHHHHHHHHHCCCCCCCCCCCCChHHHH-HHhcCcHHH
Q psy904          223 G---GYVEVGRVLLDKGADVNAPPVPSSRDTALTIAAD--KGHCRFVELLLSKGAQVEVKNKKGNSPLWL-AANGGHLSV  296 (596)
Q Consensus       223 ~---g~~~iv~~Ll~~g~~~~~~~~~~~g~t~L~~A~~--~~~~~iv~~Ll~~g~di~~~d~~g~TpL~~-A~~~g~~~i  296 (596)
                      .   ++.+++++|+++|++++.  .+..|.||||+|+.  .++.+++++|+++|++++.+|..|.||||. |+..++.++
T Consensus        97 ~~~~~~~eiv~~Ll~~gadin~--~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadin~~d~~g~t~Lh~~a~~~~~~~i  174 (209)
T PHA02859         97 FNKNVEPEILKILIDSGSSITE--EDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFLNKDFDNNNILYSYILFHSDKKI  174 (209)
T ss_pred             hCccccHHHHHHHHHCCCCCCC--cCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCcccccCCCCcHHHHHHHhcCCHHH
Confidence            3   478999999999999987  66789999999876  468999999999999999999999999995 567889999


Q ss_pred             HHHHHHCCCCcccCCCCCCCHHHHHHHcC
Q psy904          297 VELLCKHGADIDSQDNRKVSCLMAAFRKG  325 (596)
Q Consensus       297 v~~Ll~~gad~~~~~~~g~t~L~~A~~~g  325 (596)
                      +++|+++|++++.+|..|.|||++|+..+
T Consensus       175 v~~Ll~~Gadi~~~d~~g~tpl~la~~~~  203 (209)
T PHA02859        175 FDFLTSLGIDINETNKSGYNCYDLIKFRN  203 (209)
T ss_pred             HHHHHHcCCCCCCCCCCCCCHHHHHhhhh
Confidence            99999999999999999999999998664


No 44 
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.94  E-value=1.1e-25  Score=214.02  Aligned_cols=176  Identities=17%  Similarity=0.186  Sum_probs=138.0

Q ss_pred             CCCcHHHHHHhcCCHHHHHHHHhCCCCccccCCCCCCCcHHHHHHHcC--CHHHHHHHHhcCCCcccccccCCCcHHHHH
Q psy904          110 SDYTPLSLAASGGYVNIIKLLLTHGAEINSRTGSKLGISPLMLAAMNG--HTAAVKLLLDMGSDINAQIETNRNTALTLA  187 (596)
Q Consensus       110 ~g~t~L~~A~~~g~~eiv~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~g--~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A  187 (596)
                      .+.|||+.|+..|++++|+.|+..+.   .  .+..|.||||+|+.++  +.+++++|+++|++++......|.||||+|
T Consensus        20 ~~~~pL~~A~~~~~~~~vk~Li~~~n---~--~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~~~~~~g~TpLh~a   94 (209)
T PHA02859         20 RYCNPLFYYVEKDDIEGVKKWIKFVN---D--CNDLYETPIFSCLEKDKVNVEILKFLIENGADVNFKTRDNNLSALHHY   94 (209)
T ss_pred             ccCcHHHHHHHhCcHHHHHHHHHhhh---c--cCccCCCHHHHHHHcCCCCHHHHHHHHHCCCCCCccCCCCCCCHHHHH
Confidence            34566666666666666666665421   1  1233667777777643  677788888877777766445677888887


Q ss_pred             HHc---CCHHHHHHHHhcCCCcccccCCCChHHHHHHh--cCcHHHHHHHHhCCCCCCCCCCCCCCCcHHHH-HHHcCcH
Q psy904          188 CFQ---GRHEVVSLLLDRKANVEHRAKTGLTPLMEAAS--GGYVEVGRVLLDKGADVNAPPVPSSRDTALTI-AADKGHC  261 (596)
Q Consensus       188 ~~~---~~~~ii~~Ll~~g~~~~~~~~~g~t~L~~A~~--~g~~~iv~~Ll~~g~~~~~~~~~~~g~t~L~~-A~~~~~~  261 (596)
                      +..   ++.+++++|+++|++++..+..|.||||.|+.  .++.+++++|++.|++++.  .+..|.||||. |+..++.
T Consensus        95 ~~~~~~~~~eiv~~Ll~~gadin~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadin~--~d~~g~t~Lh~~a~~~~~~  172 (209)
T PHA02859         95 LSFNKNVEPEILKILIDSGSSITEEDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFLN--KDFDNNNILYSYILFHSDK  172 (209)
T ss_pred             HHhCccccHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCccc--ccCCCCcHHHHHHHhcCCH
Confidence            653   47899999999999999999999999999876  4689999999999999887  56889999996 5667899


Q ss_pred             HHHHHHHHCCCCCCCCCCCCChHHHHHHhcC
Q psy904          262 RFVELLLSKGAQVEVKNKKGNSPLWLAANGG  292 (596)
Q Consensus       262 ~iv~~Ll~~g~di~~~d~~g~TpL~~A~~~g  292 (596)
                      +++++|+++|++++.+|..|.||||+|+..+
T Consensus       173 ~iv~~Ll~~Gadi~~~d~~g~tpl~la~~~~  203 (209)
T PHA02859        173 KIFDFLTSLGIDINETNKSGYNCYDLIKFRN  203 (209)
T ss_pred             HHHHHHHHcCCCCCCCCCCCCCHHHHHhhhh
Confidence            9999999999999999999999999998754


No 45 
>KOG0502|consensus
Probab=99.92  E-value=2.5e-25  Score=197.82  Aligned_cols=235  Identities=28%  Similarity=0.360  Sum_probs=126.0

Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHhCCCCccccccCCCChHHHHHHHCCcHHHHHHHHhCCCCccCCCCCCCcHHHHHHhcC
Q psy904           43 KGFTPLILAATAGHDKVVDILLNHKADMEAQSERTKDTPLSLACSGGRYEVVELLLTRGANKEHRNVSDYTPLSLAASGG  122 (596)
Q Consensus        43 ~g~t~L~~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~~~g~~eivk~LL~~g~~~~~~d~~g~t~L~~A~~~g  122 (596)
                      .|.+.+-.+...|+.+++..++...++-...++..|+.+++.++..|+...+..+|.+|...+..+..+.+|+.+++...
T Consensus        61 lge~~~~~~~~s~nsd~~v~s~~~~~~~~~~t~p~g~~~~~v~ap~~s~~k~sttltN~~rgnevs~~p~s~~slsVhql  140 (296)
T KOG0502|consen   61 LGESLLTVAVRSGNSDVAVQSAQLDPDAIDETDPEGWSALLVAAPCGSVDKVSTTLTNGARGNEVSLMPWSPLSLSVHQL  140 (296)
T ss_pred             cCCcccchhhhcCCcHHHHHhhccCCCCCCCCCchhhhhhhhcCCCCCcceeeeeecccccCCccccccCChhhHHHHHH
Confidence            34444555555666666555555555555445555666666666666666666666666665555555555555555555


Q ss_pred             CHHHHHHHHhCCCCccccCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHhc
Q psy904          123 YVNIIKLLLTHGAEINSRTGSKLGISPLMLAAMNGHTAAVKLLLDMGSDINAQIETNRNTALTLACFQGRHEVVSLLLDR  202 (596)
Q Consensus       123 ~~eiv~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~  202 (596)
                      +++.+..+.++-.  |  ..+.+|+|||.||+..|++.+|++|++.|++                               
T Consensus       141 ~L~~~~~~~~n~V--N--~~De~GfTpLiWAaa~G~i~vV~fLL~~GAd-------------------------------  185 (296)
T KOG0502|consen  141 HLDVVDLLVNNKV--N--ACDEFGFTPLIWAAAKGHIPVVQFLLNSGAD-------------------------------  185 (296)
T ss_pred             HHHHHHHHhhccc--c--CccccCchHhHHHHhcCchHHHHHHHHcCCC-------------------------------
Confidence            5555544443321  1  1223355555555555555555555555554                               


Q ss_pred             CCCcccccCCCChHHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCC
Q psy904          203 KANVEHRAKTGLTPLMEAASGGYVEVGRVLLDKGADVNAPPVPSSRDTALTIAADKGHCRFVELLLSKGAQVEVKNKKGN  282 (596)
Q Consensus       203 g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~g~di~~~d~~g~  282 (596)
                         +........++|++|++.|+.++|++|+..+.|+|.  .+-+|.|||.+|+..++.++++.|+..|+|++..+..|+
T Consensus       186 ---p~~lgk~resALsLAt~ggytdiV~lLL~r~vdVNv--yDwNGgTpLlyAvrgnhvkcve~Ll~sGAd~t~e~dsGy  260 (296)
T KOG0502|consen  186 ---PDALGKYRESALSLATRGGYTDIVELLLTREVDVNV--YDWNGGTPLLYAVRGNHVKCVESLLNSGADVTQEDDSGY  260 (296)
T ss_pred             ---hhhhhhhhhhhHhHHhcCChHHHHHHHHhcCCCcce--eccCCCceeeeeecCChHHHHHHHHhcCCCcccccccCC
Confidence               444444444555555555555555555555555554  444555555555555555555555555555555555555


Q ss_pred             hHHHHHHhcCcHHHHHHHHHCCCCcccCCCCCCCHH
Q psy904          283 SPLWLAANGGHLSVVELLCKHGADIDSQDNRKVSCL  318 (596)
Q Consensus       283 TpL~~A~~~g~~~iv~~Ll~~gad~~~~~~~g~t~L  318 (596)
                      +++..|+..|+- +|+..|+.-++...+|+.-.||+
T Consensus       261 ~~mdlAValGyr-~Vqqvie~h~lkl~Q~~~~~~~~  295 (296)
T KOG0502|consen  261 WIMDLAVALGYR-IVQQVIEKHALKLCQDSEKRTPL  295 (296)
T ss_pred             cHHHHHHHhhhH-HHHHHHHHHHHHHhhcccCCCCC
Confidence            555555555555 55555554444444444444443


No 46 
>KOG0502|consensus
Probab=99.92  E-value=1.1e-24  Score=193.73  Aligned_cols=220  Identities=29%  Similarity=0.373  Sum_probs=181.3

Q ss_pred             CCCcHHHHHHhcCCHHHHHHHHhCCCCccccCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCcHHHHHHH
Q psy904          110 SDYTPLSLAASGGYVNIIKLLLTHGAEINSRTGSKLGISPLMLAAMNGHTAAVKLLLDMGSDINAQIETNRNTALTLACF  189 (596)
Q Consensus       110 ~g~t~L~~A~~~g~~eiv~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~~  189 (596)
                      .|...+..+...|+.+++..++...++...... ..|..+++.++-.|+++.+..++.++...+.. +..+.+|+.+++.
T Consensus        61 lge~~~~~~~~s~nsd~~v~s~~~~~~~~~~t~-p~g~~~~~v~ap~~s~~k~sttltN~~rgnev-s~~p~s~~slsVh  138 (296)
T KOG0502|consen   61 LGESLLTVAVRSGNSDVAVQSAQLDPDAIDETD-PEGWSALLVAAPCGSVDKVSTTLTNGARGNEV-SLMPWSPLSLSVH  138 (296)
T ss_pred             cCCcccchhhhcCCcHHHHHhhccCCCCCCCCC-chhhhhhhhcCCCCCcceeeeeecccccCCcc-ccccCChhhHHHH
Confidence            344445556666666666555554443332222 23777888888888888888888877766655 5667788999998


Q ss_pred             cCCHHHHHHHHhcCCCcccccCCCChHHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHH
Q psy904          190 QGRHEVVSLLLDRKANVEHRAKTGLTPLMEAASGGYVEVGRVLLDKGADVNAPPVPSSRDTALTIAADKGHCRFVELLLS  269 (596)
Q Consensus       190 ~~~~~ii~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~  269 (596)
                      ..+++.+..+.++  -+|..|..|.|||++|+..|++.+|++|++.|+++++  .-....++|.+|+..|..+||++||.
T Consensus       139 ql~L~~~~~~~~n--~VN~~De~GfTpLiWAaa~G~i~vV~fLL~~GAdp~~--lgk~resALsLAt~ggytdiV~lLL~  214 (296)
T KOG0502|consen  139 QLHLDVVDLLVNN--KVNACDEFGFTPLIWAAAKGHIPVVQFLLNSGADPDA--LGKYRESALSLATRGGYTDIVELLLT  214 (296)
T ss_pred             HHHHHHHHHHhhc--cccCccccCchHhHHHHhcCchHHHHHHHHcCCChhh--hhhhhhhhHhHHhcCChHHHHHHHHh
Confidence            8888888777654  4678899999999999999999999999999999987  44566799999999999999999999


Q ss_pred             CCCCCCCCCCCCChHHHHHHhcCcHHHHHHHHHCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHhC
Q psy904          270 KGAQVEVKNKKGNSPLWLAANGGHLSVVELLCKHGADIDSQDNRKVSCLMAAFRKGHVKAVRWMVNH  336 (596)
Q Consensus       270 ~g~di~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~  336 (596)
                      +++|+|..|.+|-|||-||++.|+.+|++.||..|||++..+..|++++..|+..|.. +|+..+++
T Consensus       215 r~vdVNvyDwNGgTpLlyAvrgnhvkcve~Ll~sGAd~t~e~dsGy~~mdlAValGyr-~Vqqvie~  280 (296)
T KOG0502|consen  215 REVDVNVYDWNGGTPLLYAVRGNHVKCVESLLNSGADVTQEDDSGYWIMDLAVALGYR-IVQQVIEK  280 (296)
T ss_pred             cCCCcceeccCCCceeeeeecCChHHHHHHHHhcCCCcccccccCCcHHHHHHHhhhH-HHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999999987 77776654


No 47 
>KOG0507|consensus
Probab=99.91  E-value=4.3e-24  Score=221.14  Aligned_cols=246  Identities=32%  Similarity=0.387  Sum_probs=198.0

Q ss_pred             cHHHHHHhcCcHHHHHHHHHC-----C--------CCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC
Q psy904           13 TALTLACAGGHEELVELLLSR-----G--------ADIEHRDKKGFTPLILAATAGHDKVVDILLNHKADMEAQSERTKD   79 (596)
Q Consensus        13 t~L~~A~~~g~~~ivk~Ll~~-----g--------~~i~~~d~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~   79 (596)
                      +-|.-||..|+++.|..||+.     |        .+++..|.+|+|+||.|+.+|+..++.+|+++.+-++... ..|.
T Consensus         5 qel~~a~ka~d~~tva~ll~~~~~r~~~l~~~trsds~n~qd~~gfTalhha~Lng~~~is~llle~ea~ldl~d-~kg~   83 (854)
T KOG0507|consen    5 QELIDACKAGDYDTVALLLSSKKGRSGLLFFTTRSDSHNLQDYSGFTLLHHAVLNGQNQISKLLLDYEALLDLCD-TKGI   83 (854)
T ss_pred             hhHHHhhhcccHHHHHHhccCCCCCCCCCCCCCCCccccccCccchhHHHHHHhcCchHHHHHHhcchhhhhhhh-ccCc
Confidence            567889999999999999985     1        3467788999999999999999999999999988877665 6799


Q ss_pred             hHHHHHHHCCcHHHHHHHHhCCCCccCCCCCCCcHHHHHHhcCCHHHHHHHHhCCCCccccCCCCCCCcHHHHHHHcCCH
Q psy904           80 TPLSLACSGGRYEVVELLLTRGANKEHRNVSDYTPLSLAASGGYVNIIKLLLTHGAEINSRTGSKLGISPLMLAAMNGHT  159 (596)
Q Consensus        80 t~L~~A~~~g~~eivk~LL~~g~~~~~~d~~g~t~L~~A~~~g~~eiv~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~g~~  159 (596)
                      +|||+|++.|+.++|++||.++..++..+..|.||||.|+..|+.+++.+|+.+|++......+  +.|+|.+|++.|..
T Consensus        84 ~plhlaaw~g~~e~vkmll~q~d~~na~~~e~~tplhlaaqhgh~dvv~~Ll~~~adp~i~nns--~~t~ldlA~qfgr~  161 (854)
T KOG0507|consen   84 LPLHLAAWNGNLEIVKMLLLQTDILNAVNIENETPLHLAAQHGHLEVVFYLLKKNADPFIRNNS--KETVLDLASRFGRA  161 (854)
T ss_pred             ceEEehhhcCcchHHHHHHhcccCCCcccccCcCccchhhhhcchHHHHHHHhcCCCccccCcc--cccHHHHHHHhhhh
Confidence            9999999999999999999999999999999999999999999999999999999988776654  88999999999999


Q ss_pred             HHHHHHHhcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccCCCChHHHHHHhcCcHHHHHHHHhCCCCC
Q psy904          160 AAVKLLLDMGSDINAQIETNRNTALTLACFQGRHEVVSLLLDRKANVEHRAKTGLTPLMEAASGGYVEVGRVLLDKGADV  239 (596)
Q Consensus       160 eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~  239 (596)
                      .+|+.|+....  ....                      +.-.|  -..++..+.+|||.|+.+|+.++++.|++.|.++
T Consensus       162 ~Vvq~ll~~~~--~~~~----------------------~~~~~--~~~~~~~~~~plHlaakngh~~~~~~ll~ag~di  215 (854)
T KOG0507|consen  162 EVVQMLLQKKF--PVQS----------------------SLRVG--DIKRPFPAIYPLHLAAKNGHVECMQALLEAGFDI  215 (854)
T ss_pred             HHHHHHhhhcc--chhh----------------------cccCC--CCCCCCCCcCCcchhhhcchHHHHHHHHhcCCCc
Confidence            99999988621  1110                      11122  2334556667777777777777777777777777


Q ss_pred             CCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCChHHHHHHh
Q psy904          240 NAPPVPSSRDTALTIAADKGHCRFVELLLSKGAQVEVKNKKGNSPLWLAAN  290 (596)
Q Consensus       240 ~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~g~di~~~d~~g~TpL~~A~~  290 (596)
                      |...   ..-|+||.|+..|..++|.+|++.|++..++|.+|.|+|.+...
T Consensus       216 n~~t---~~gtalheaalcgk~evvr~ll~~gin~h~~n~~~qtaldil~d  263 (854)
T KOG0507|consen  216 NYTT---EDGTALHEAALCGKAEVVRFLLEIGINTHIKNQHGQTALDIIID  263 (854)
T ss_pred             cccc---ccchhhhhHhhcCcchhhhHHHhhccccccccccchHHHHHHHh
Confidence            7543   33377777777777777777777777777777777777766554


No 48 
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.91  E-value=1.2e-23  Score=238.20  Aligned_cols=242  Identities=24%  Similarity=0.209  Sum_probs=187.3

Q ss_pred             CCCCCcHHHHHHhcCcHHHHHHHHHC--CCCccccCCCCCcHHH-HHHHcCCHHHHHHHHhCCCCccccccCCCChHHHH
Q psy904            8 ESNHDTALTLACAGGHEELVELLLSR--GADIEHRDKKGFTPLI-LAATAGHDKVVDILLNHKADMEAQSERTKDTPLSL   84 (596)
Q Consensus         8 d~~g~t~L~~A~~~g~~~ivk~Ll~~--g~~i~~~d~~g~t~L~-~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~   84 (596)
                      -+.+...|+.||..|+++.|+.+++.  +.++|..|..|.|||| .|+.+++.+++++|+++|.     .+..|.||||.
T Consensus        14 ~~~~~~~~l~A~~~g~~~~v~~lL~~~~~~~in~~d~~G~t~Lh~~A~~~~~~eiv~lLl~~g~-----~~~~G~T~Lh~   88 (743)
T TIGR00870        14 LSDEEKAFLPAAERGDLASVYRDLEEPKKLNINCPDRLGRSALFVAAIENENLELTELLLNLSC-----RGAVGDTLLHA   88 (743)
T ss_pred             CCHHHHHHHHHHHcCCHHHHHHHhccccccCCCCcCccchhHHHHHHHhcChHHHHHHHHhCCC-----CCCcChHHHHH
Confidence            35667999999999999999999998  8999999999999999 8999999999999999987     35578999999


Q ss_pred             HHHCC---cHHHHHHHHhCCCC------c----cCCCCCCCcHHHHHHhcCCHHHHHHHHhCCCCccccCC---------
Q psy904           85 ACSGG---RYEVVELLLTRGAN------K----EHRNVSDYTPLSLAASGGYVNIIKLLLTHGAEINSRTG---------  142 (596)
Q Consensus        85 A~~~g---~~eivk~LL~~g~~------~----~~~d~~g~t~L~~A~~~g~~eiv~~Ll~~g~~~~~~~~---------  142 (596)
                      |+..+   ...++.+++..+..      +    ......|.||||+|+..|+.++|++|+++|++++....         
T Consensus        89 A~~~~~~~v~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~~~~~~~~~~  168 (743)
T TIGR00870        89 ISLEYVDAVEAILLHLLAAFRKSGPLELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQG  168 (743)
T ss_pred             HHhccHHHHHHHHHHHhhcccccCchhhhccccccccCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcCCchhhcCCC
Confidence            99732   22344444444322      1    11234689999999999999999999999999885421         


Q ss_pred             ---CCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCcHHHHHHHcC---------CHHHHHHHHhcCCCc----
Q psy904          143 ---SKLGISPLMLAAMNGHTAAVKLLLDMGSDINAQIETNRNTALTLACFQG---------RHEVVSLLLDRKANV----  206 (596)
Q Consensus       143 ---~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~---------~~~ii~~Ll~~g~~~----  206 (596)
                         ...|.+|||.|+..|+.+++++|+++|++++.. +..|+||||+|+..+         ...+.++++..+...    
T Consensus       169 ~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~gadin~~-d~~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~  247 (743)
T TIGR00870       169 VDSFYHGESPLNAAACLGSPSIVALLSEDPADILTA-DSLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDKLRDSK  247 (743)
T ss_pred             CCcccccccHHHHHHHhCCHHHHHHHhcCCcchhhH-hhhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCChH
Confidence               234789999999999999999999999988876 678899999999886         233555666554443    


Q ss_pred             ---ccccCCCChHHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHH
Q psy904          207 ---EHRAKTGLTPLMEAASGGYVEVGRVLLDKGADVNAPPVPSSRDTALTIAAD  257 (596)
Q Consensus       207 ---~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~g~t~L~~A~~  257 (596)
                         +..|..|.||||+|+..|+.+++++|++.+.....  .....+.+.+.+..
T Consensus       248 el~~i~N~~g~TPL~~A~~~g~~~l~~lLL~~~~~~kk--~~a~~~~~~~~~~~  299 (743)
T TIGR00870       248 ELEVILNHQGLTPLKLAAKEGRIVLFRLKLAIKYKQKK--FVAWPNGQQLLSLY  299 (743)
T ss_pred             hhhhhcCCCCCCchhhhhhcCCccHHHHHHHHHHhcce--eeccCcchHhHhhh
Confidence               55688899999999999999999999985433211  22334455555443


No 49 
>KOG0507|consensus
Probab=99.91  E-value=8.3e-24  Score=219.05  Aligned_cols=252  Identities=28%  Similarity=0.299  Sum_probs=155.2

Q ss_pred             HHHHHHHcCCHHHHHHHHhCCCC------------ccccccCCCChHHHHHHHCCcHHHHHHHHhCCCCccCCCCCCCcH
Q psy904           47 PLILAATAGHDKVVDILLNHKAD------------MEAQSERTKDTPLSLACSGGRYEVVELLLTRGANKEHRNVSDYTP  114 (596)
Q Consensus        47 ~L~~A~~~g~~eiv~~Ll~~~~~------------~~~~~~~~~~t~L~~A~~~g~~eivk~LL~~g~~~~~~d~~g~t~  114 (596)
                      -|.-|+..|+.+.+..||+....            -....+.+|.|+||.||.+|+..++++|+++.+-++..+..|.+|
T Consensus         6 el~~a~ka~d~~tva~ll~~~~~r~~~l~~~trsds~n~qd~~gfTalhha~Lng~~~is~llle~ea~ldl~d~kg~~p   85 (854)
T KOG0507|consen    6 ELIDACKAGDYDTVALLLSSKKGRSGLLFFTTRSDSHNLQDYSGFTLLHHAVLNGQNQISKLLLDYEALLDLCDTKGILP   85 (854)
T ss_pred             hHHHhhhcccHHHHHHhccCCCCCCCCCCCCCCCccccccCccchhHHHHHHhcCchHHHHHHhcchhhhhhhhccCcce
Confidence            45566666777776666654211            011122344455555555555555555555544444444445555


Q ss_pred             HHHHHhcCCHHHHHHHHhCCCCccccCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCcHHHHHHHcCCHH
Q psy904          115 LSLAASGGYVNIIKLLLTHGAEINSRTGSKLGISPLMLAAMNGHTAAVKLLLDMGSDINAQIETNRNTALTLACFQGRHE  194 (596)
Q Consensus       115 L~~A~~~g~~eiv~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~  194 (596)
                      ||+|+..|+.+++++|+..+                                   ..++.. ...|.||||.|+..|+.+
T Consensus        86 lhlaaw~g~~e~vkmll~q~-----------------------------------d~~na~-~~e~~tplhlaaqhgh~d  129 (854)
T KOG0507|consen   86 LHLAAWNGNLEIVKMLLLQT-----------------------------------DILNAV-NIENETPLHLAAQHGHLE  129 (854)
T ss_pred             EEehhhcCcchHHHHHHhcc-----------------------------------cCCCcc-cccCcCccchhhhhcchH
Confidence            55555555555555555444                                   333332 233444555555555555


Q ss_pred             HHHHHHhcCCCcccccCCCChHHHHHHhcCcHHHHHHHHhCCCCC------CCCCCCCCCCcHHHHHHHcCcHHHHHHHH
Q psy904          195 VVSLLLDRKANVEHRAKTGLTPLMEAASGGYVEVGRVLLDKGADV------NAPPVPSSRDTALTIAADKGHCRFVELLL  268 (596)
Q Consensus       195 ii~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~------~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll  268 (596)
                      ++.+|+.+|+++..++..+.|+|..|+..|...+++.|+....++      +....+..+.+|||.|+.+|+.++++.|+
T Consensus       130 vv~~Ll~~~adp~i~nns~~t~ldlA~qfgr~~Vvq~ll~~~~~~~~~~~~~~~~~~~~~~~plHlaakngh~~~~~~ll  209 (854)
T KOG0507|consen  130 VVFYLLKKNADPFIRNNSKETVLDLASRFGRAEVVQMLLQKKFPVQSSLRVGDIKRPFPAIYPLHLAAKNGHVECMQALL  209 (854)
T ss_pred             HHHHHHhcCCCccccCcccccHHHHHHHhhhhHHHHHHhhhccchhhcccCCCCCCCCCCcCCcchhhhcchHHHHHHHH
Confidence            555555555555444445555555555555555554444431111      11224456789999999999999999999


Q ss_pred             HCCCCCCCCCCCCChHHHHHHhcCcHHHHHHHHHCCCCcccCCCCCCCHHHHHHHcC---CHHHHHHHHh
Q psy904          269 SKGAQVEVKNKKGNSPLWLAANGGHLSVVELLCKHGADIDSQDNRKVSCLMAAFRKG---HVKAVRWMVN  335 (596)
Q Consensus       269 ~~g~di~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~~~~g~t~L~~A~~~g---~~~iv~~Ll~  335 (596)
                      ..|+|+|.....| |+||.|+..|..++|.+|++.|++.+++|..|.|+|++-...-   .++++-++..
T Consensus       210 ~ag~din~~t~~g-talheaalcgk~evvr~ll~~gin~h~~n~~~qtaldil~d~~~~~~~ei~ga~~~  278 (854)
T KOG0507|consen  210 EAGFDINYTTEDG-TALHEAALCGKAEVVRFLLEIGINTHIKNQHGQTALDIIIDLQENRRYEIAGAVKN  278 (854)
T ss_pred             hcCCCcccccccc-hhhhhHhhcCcchhhhHHHhhccccccccccchHHHHHHHhcchhhhhhhhhhhhc
Confidence            9999999988776 7999999999999999999999999999999999998876553   3444444443


No 50 
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.91  E-value=6.6e-23  Score=233.48  Aligned_cols=174  Identities=25%  Similarity=0.305  Sum_probs=160.7

Q ss_pred             CCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccCCCChHHHHHHhcCc
Q psy904          146 GISPLMLAAMNGHTAAVKLLLDMGSDINAQIETNRNTALTLACFQGRHEVVSLLLDRKANVEHRAKTGLTPLMEAASGGY  225 (596)
Q Consensus       146 g~t~L~~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~  225 (596)
                      +.++|+.|+..|+.++++.|+..|++++.. +..|.||||+|+..|+.+++++|+++|++++.+|..|.||||.|+..|+
T Consensus       525 ~~~~L~~Aa~~g~~~~l~~Ll~~G~d~n~~-d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadin~~d~~G~TpL~~A~~~g~  603 (823)
T PLN03192        525 MASNLLTVASTGNAALLEELLKAKLDPDIG-DSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAISAKH  603 (823)
T ss_pred             chhHHHHHHHcCCHHHHHHHHHCCCCCCCC-CCCCCCHHHHHHHcChHHHHHHHHhcCCCCCCcCCCCCCHHHHHHHhCC
Confidence            568999999999999999999999999876 7789999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCChHHHHHHhcCcHHHHHHHHHCCC
Q psy904          226 VEVGRVLLDKGADVNAPPVPSSRDTALTIAADKGHCRFVELLLSKGAQVEVKNKKGNSPLWLAANGGHLSVVELLCKHGA  305 (596)
Q Consensus       226 ~~iv~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~g~di~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga  305 (596)
                      .+++++|+..++..+.    ..+.++||.|+..|+.+++++|+++|+|+|.+|..|.||||+|+..|+.+++++|+++|+
T Consensus       604 ~~iv~~L~~~~~~~~~----~~~~~~L~~Aa~~g~~~~v~~Ll~~Gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~GA  679 (823)
T PLN03192        604 HKIFRILYHFASISDP----HAAGDLLCTAAKRNDLTAMKELLKQGLNVDSEDHQGATALQVAMAEDHVDMVRLLIMNGA  679 (823)
T ss_pred             HHHHHHHHhcCcccCc----ccCchHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHHHHHHHHcCC
Confidence            9999999988765542    457799999999999999999999999999999999999999999999999999999999


Q ss_pred             CcccCCCCC-CCHHHHHHHc
Q psy904          306 DIDSQDNRK-VSCLMAAFRK  324 (596)
Q Consensus       306 d~~~~~~~g-~t~L~~A~~~  324 (596)
                      +++..|..| .||+.++...
T Consensus       680 dv~~~~~~g~~t~~~l~~~~  699 (823)
T PLN03192        680 DVDKANTDDDFSPTELRELL  699 (823)
T ss_pred             CCCCCCCCCCCCHHHHHHHH
Confidence            999999888 8998887543


No 51 
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.91  E-value=1.8e-23  Score=236.71  Aligned_cols=234  Identities=25%  Similarity=0.251  Sum_probs=144.3

Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHhC--CCCccccccCCCChHHH-HHHHCCcHHHHHHHHhCCCCccCCCCCCCcHHHHHH
Q psy904           43 KGFTPLILAATAGHDKVVDILLNH--KADMEAQSERTKDTPLS-LACSGGRYEVVELLLTRGANKEHRNVSDYTPLSLAA  119 (596)
Q Consensus        43 ~g~t~L~~A~~~g~~eiv~~Ll~~--~~~~~~~~~~~~~t~L~-~A~~~g~~eivk~LL~~g~~~~~~d~~g~t~L~~A~  119 (596)
                      .+...|+.|+..|+.+.++.+++.  +.+++. .+..|.|||| .|+.+++.+++++|++.|.    .+..|.||||.|+
T Consensus        16 ~~~~~~l~A~~~g~~~~v~~lL~~~~~~~in~-~d~~G~t~Lh~~A~~~~~~eiv~lLl~~g~----~~~~G~T~Lh~A~   90 (743)
T TIGR00870        16 DEEKAFLPAAERGDLASVYRDLEEPKKLNINC-PDRLGRSALFVAAIENENLELTELLLNLSC----RGAVGDTLLHAIS   90 (743)
T ss_pred             HHHHHHHHHHHcCCHHHHHHHhccccccCCCC-cCccchhHHHHHHHhcChHHHHHHHHhCCC----CCCcChHHHHHHH
Confidence            455678888888888888888877  555543 3456778888 7777778888888887776    4566778888777


Q ss_pred             hcC---CHHHHHHHHhCCCCc------cc--cCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCcHHHHHH
Q psy904          120 SGG---YVNIIKLLLTHGAEI------NS--RTGSKLGISPLMLAAMNGHTAAVKLLLDMGSDINAQIETNRNTALTLAC  188 (596)
Q Consensus       120 ~~g---~~eiv~~Ll~~g~~~------~~--~~~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~  188 (596)
                      .++   ...++.++...+...      +.  ......|.||||+|+.+|+.+++++|+++|++++....  +..+.    
T Consensus        91 ~~~~~~v~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~--~~~~~----  164 (743)
T TIGR00870        91 LEYVDAVEAILLHLLAAFRKSGPLELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVPARAC--GDFFV----  164 (743)
T ss_pred             hccHHHHHHHHHHHhhcccccCchhhhccccccccCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcC--Cchhh----
Confidence            622   122333343333210      00  01112356666666666666666666666666553211  00000    


Q ss_pred             HcCCHHHHHHHHhcCCCcccccCCCChHHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHcC---------
Q psy904          189 FQGRHEVVSLLLDRKANVEHRAKTGLTPLMEAASGGYVEVGRVLLDKGADVNAPPVPSSRDTALTIAADKG---------  259 (596)
Q Consensus       189 ~~~~~~ii~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~---------  259 (596)
                                   .+.. ......|.||||.|+..|+.+++++|+++|++++.  .+..|+||||+|+..+         
T Consensus       165 -------------~~~~-~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~gadin~--~d~~g~T~Lh~A~~~~~~~~~~~~l  228 (743)
T TIGR00870       165 -------------KSQG-VDSFYHGESPLNAAACLGSPSIVALLSEDPADILT--ADSLGNTLLHLLVMENEFKAEYEEL  228 (743)
T ss_pred             -------------cCCC-CCcccccccHHHHHHHhCCHHHHHHHhcCCcchhh--HhhhhhHHHHHHHhhhhhhHHHHHH
Confidence                         0000 00113467777777777777777777777777665  4567777777777765         


Q ss_pred             cHHHHHHHHHCCCCC-------CCCCCCCChHHHHHHhcCcHHHHHHHHHC
Q psy904          260 HCRFVELLLSKGAQV-------EVKNKKGNSPLWLAANGGHLSVVELLCKH  303 (596)
Q Consensus       260 ~~~iv~~Ll~~g~di-------~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~  303 (596)
                      ...+.+++++.++..       +..|.+|.||||+|+..|+.+++++|++.
T Consensus       229 ~~~~~~~l~~ll~~~~~~~el~~i~N~~g~TPL~~A~~~g~~~l~~lLL~~  279 (743)
T TIGR00870       229 SCQMYNFALSLLDKLRDSKELEVILNHQGLTPLKLAAKEGRIVLFRLKLAI  279 (743)
T ss_pred             HHHHHHHHHHHHhccCChHhhhhhcCCCCCCchhhhhhcCCccHHHHHHHH
Confidence            223455555554433       55677888888888888888888888874


No 52 
>KOG0505|consensus
Probab=99.89  E-value=6.4e-23  Score=205.96  Aligned_cols=229  Identities=31%  Similarity=0.411  Sum_probs=167.6

Q ss_pred             HHHHHHHCCcHHHHHHHHhCCCCccCCCCCCCcHHHHHHhcCCHHHHHHHHhCCCCccccCCCCCCCcHHHHHHHcCCHH
Q psy904           81 PLSLACSGGRYEVVELLLTRGANKEHRNVSDYTPLSLAASGGYVNIIKLLLTHGAEINSRTGSKLGISPLMLAAMNGHTA  160 (596)
Q Consensus        81 ~L~~A~~~g~~eivk~LL~~g~~~~~~d~~g~t~L~~A~~~g~~eiv~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~g~~e  160 (596)
                      .+.-|+..|..+=|..||..|++++..+.+|.|+||-++...+.+||++|+++|++++..+..  +.||||.|+..|++.
T Consensus        43 ~~l~A~~~~d~~ev~~ll~~ga~~~~~n~DglTalhq~~id~~~e~v~~l~e~ga~Vn~~d~e--~wtPlhaaascg~~~  120 (527)
T KOG0505|consen   43 VFLEACSRGDLEEVRKLLNRGASPNLCNVDGLTALHQACIDDNLEMVKFLVENGANVNAQDNE--GWTPLHAAASCGYLN  120 (527)
T ss_pred             HHHhccccccHHHHHHHhccCCCccccCCccchhHHHHHhcccHHHHHHHHHhcCCccccccc--cCCcchhhcccccHH
Confidence            344556667777777777777777777777777777777777777777777777777665543  677777777777777


Q ss_pred             HHHHHHhcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHhc-CCCccccc-CCCChHHHHHHhcCcHHHHHHHHhCCCC
Q psy904          161 AVKLLLDMGSDINAQIETNRNTALTLACFQGRHEVVSLLLDR-KANVEHRA-KTGLTPLMEAASGGYVEVGRVLLDKGAD  238 (596)
Q Consensus       161 iv~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~-g~~~~~~~-~~g~t~L~~A~~~g~~~iv~~Ll~~g~~  238 (596)
                      ++.+|+.+|+++... +..|..|+.++......+++...... |.+++..- ..-.+.|+        ++-.| +..|..
T Consensus       121 i~~~li~~gA~~~av-Nsdg~~P~dl~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~--------D~~q~-l~~G~~  190 (527)
T KOG0505|consen  121 IVEYLIQHGANLLAV-NSDGNMPYDLAEDEATLDVLETEMARQGIDIEAARKAEEQTMLD--------DARQW-LNAGAE  190 (527)
T ss_pred             HHHHHHHhhhhhhhc-cCCCCCccccccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHH--------HHHHH-Hhcccc
Confidence            777777777766654 45566676666665555555554432 33321100 00111111        23334 448888


Q ss_pred             CCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCChHHHHHHhcCcHHHHHHHHHCCCCcccCCCCCCCHH
Q psy904          239 VNAPPVPSSRDTALTIAADKGHCRFVELLLSKGAQVEVKNKKGNSPLWLAANGGHLSVVELLCKHGADIDSQDNRKVSCL  318 (596)
Q Consensus       239 ~~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~g~di~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~~~~g~t~L  318 (596)
                      .++...  .|.|+||+|+..|..++..+|+++|.++++.|.+|+||||.|+.+|..+++++|+++|++.+..+..|.||+
T Consensus       191 ~d~~~~--rG~T~lHvAaa~Gy~e~~~lLl~ag~~~~~~D~dgWtPlHAAA~Wg~~~~~elL~~~ga~~d~~t~~g~~p~  268 (527)
T KOG0505|consen  191 LDARHA--RGATALHVAAANGYTEVAALLLQAGYSVNIKDYDGWTPLHAAAHWGQEDACELLVEHGADMDAKTKMGETPL  268 (527)
T ss_pred             cccccc--ccchHHHHHHhhhHHHHHHHHHHhccCcccccccCCCcccHHHHhhhHhHHHHHHHhhcccchhhhcCCCCc
Confidence            777543  399999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHH
Q psy904          319 MAAFR  323 (596)
Q Consensus       319 ~~A~~  323 (596)
                      .+|..
T Consensus       269 dv~de  273 (527)
T KOG0505|consen  269 DVADE  273 (527)
T ss_pred             cchhh
Confidence            99854


No 53 
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.88  E-value=1.4e-21  Score=222.68  Aligned_cols=161  Identities=26%  Similarity=0.331  Sum_probs=150.8

Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHhcCCCcccccCCCChHHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHc
Q psy904          179 NRNTALTLACFQGRHEVVSLLLDRKANVEHRAKTGLTPLMEAASGGYVEVGRVLLDKGADVNAPPVPSSRDTALTIAADK  258 (596)
Q Consensus       179 ~~~t~L~~A~~~~~~~ii~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~  258 (596)
                      .+.++|+.|+..|+.++++.|++.|++++..|..|.||||+|+..|+.+++++|+++|++++.  .+..|.||||+|+..
T Consensus       524 ~~~~~L~~Aa~~g~~~~l~~Ll~~G~d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadin~--~d~~G~TpL~~A~~~  601 (823)
T PLN03192        524 NMASNLLTVASTGNAALLEELLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHI--RDANGNTALWNAISA  601 (823)
T ss_pred             cchhHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHhcCCCCCC--cCCCCCCHHHHHHHh
Confidence            456899999999999999999999999999999999999999999999999999999999987  567899999999999


Q ss_pred             CcHHHHHHHHHCCCCCCCCCCCCChHHHHHHhcCcHHHHHHHHHCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHhCcC
Q psy904          259 GHCRFVELLLSKGAQVEVKNKKGNSPLWLAANGGHLSVVELLCKHGADIDSQDNRKVSCLMAAFRKGHVKAVRWMVNHVA  338 (596)
Q Consensus       259 ~~~~iv~~Ll~~g~di~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~  338 (596)
                      |+.+++++|+..++..+.  ..|.+|||.|+..|+.+++++|+++|+|++.+|..|.||||+|+..|+.+++++|+++|+
T Consensus       602 g~~~iv~~L~~~~~~~~~--~~~~~~L~~Aa~~g~~~~v~~Ll~~Gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~GA  679 (823)
T PLN03192        602 KHHKIFRILYHFASISDP--HAAGDLLCTAAKRNDLTAMKELLKQGLNVDSEDHQGATALQVAMAEDHVDMVRLLIMNGA  679 (823)
T ss_pred             CCHHHHHHHHhcCcccCc--ccCchHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHHHHHHHHcCC
Confidence            999999999998876543  457799999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCc
Q psy904          339 QFPSD  343 (596)
Q Consensus       339 ~~~~~  343 (596)
                      ++...
T Consensus       680 dv~~~  684 (823)
T PLN03192        680 DVDKA  684 (823)
T ss_pred             CCCCC
Confidence            87654


No 54 
>KOG0505|consensus
Probab=99.88  E-value=3.4e-22  Score=200.76  Aligned_cols=231  Identities=32%  Similarity=0.413  Sum_probs=175.7

Q ss_pred             HHHHHHhcCcHHHHHHHHHCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccccCCCChHHHHHHHCCcHHH
Q psy904           14 ALTLACAGGHEELVELLLSRGADIEHRDKKGFTPLILAATAGHDKVVDILLNHKADMEAQSERTKDTPLSLACSGGRYEV   93 (596)
Q Consensus        14 ~L~~A~~~g~~~ivk~Ll~~g~~i~~~d~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~~~g~~ei   93 (596)
                      .|.-||..|..+-|..|+..|++++..+.+|.|+||-+|.-.+.+||+||+++|++++.. +..++||||.|+..||+.+
T Consensus        43 ~~l~A~~~~d~~ev~~ll~~ga~~~~~n~DglTalhq~~id~~~e~v~~l~e~ga~Vn~~-d~e~wtPlhaaascg~~~i  121 (527)
T KOG0505|consen   43 VFLEACSRGDLEEVRKLLNRGASPNLCNVDGLTALHQACIDDNLEMVKFLVENGANVNAQ-DNEGWTPLHAAASCGYLNI  121 (527)
T ss_pred             HHHhccccccHHHHHHHhccCCCccccCCccchhHHHHHhcccHHHHHHHHHhcCCcccc-ccccCCcchhhcccccHHH
Confidence            456788888999999999988888888899999999999999999999999999888775 5578899999999999999


Q ss_pred             HHHHHhCCCCccCCCCCCCcHHHHHHhcCCHHHHHHHHhCCCCccccCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcc
Q psy904           94 VELLLTRGANKEHRNVSDYTPLSLAASGGYVNIIKLLLTHGAEINSRTGSKLGISPLMLAAMNGHTAAVKLLLDMGSDIN  173 (596)
Q Consensus        94 vk~LL~~g~~~~~~d~~g~t~L~~A~~~g~~eiv~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~~  173 (596)
                      +.+|+.+|+++...+..|..|+..+......+++......                       -           |.++.
T Consensus       122 ~~~li~~gA~~~avNsdg~~P~dl~e~ea~~~~l~~~~~r-----------------------~-----------gi~ie  167 (527)
T KOG0505|consen  122 VEYLIQHGANLLAVNSDGNMPYDLAEDEATLDVLETEMAR-----------------------Q-----------GIDIE  167 (527)
T ss_pred             HHHHHHhhhhhhhccCCCCCccccccCcchhHHHHHHHHH-----------------------h-----------cccHH
Confidence            9999999988888888887777666544333333322221                       0           11111


Q ss_pred             cccccCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccCCCChHHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCCCcHHH
Q psy904          174 AQIETNRNTALTLACFQGRHEVVSLLLDRKANVEHRAKTGLTPLMEAASGGYVEVGRVLLDKGADVNAPPVPSSRDTALT  253 (596)
Q Consensus       174 ~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~g~t~L~  253 (596)
                      ........+.|        .++..||. .|...+..+..|.|.||.|+..|+.++..+|+..|.++++  .+.+|.||||
T Consensus       168 a~R~~~e~~ml--------~D~~q~l~-~G~~~d~~~~rG~T~lHvAaa~Gy~e~~~lLl~ag~~~~~--~D~dgWtPlH  236 (527)
T KOG0505|consen  168 AARKAEEQTML--------DDARQWLN-AGAELDARHARGATALHVAAANGYTEVAALLLQAGYSVNI--KDYDGWTPLH  236 (527)
T ss_pred             HHhhhhHHHHH--------HHHHHHHh-ccccccccccccchHHHHHHhhhHHHHHHHHHHhccCccc--ccccCCCccc
Confidence            10000011111        13344444 6777777777788999999999999999999999988888  5678889999


Q ss_pred             HHHHcCcHHHHHHHHHCCCCCCCCCCCCChHHHHHHh
Q psy904          254 IAADKGHCRFVELLLSKGAQVEVKNKKGNSPLWLAAN  290 (596)
Q Consensus       254 ~A~~~~~~~iv~~Ll~~g~di~~~d~~g~TpL~~A~~  290 (596)
                      .|+..|..+++++|+++|++++.....|.|||.+|..
T Consensus       237 AAA~Wg~~~~~elL~~~ga~~d~~t~~g~~p~dv~de  273 (527)
T KOG0505|consen  237 AAAHWGQEDACELLVEHGADMDAKTKMGETPLDVADE  273 (527)
T ss_pred             HHHHhhhHhHHHHHHHhhcccchhhhcCCCCccchhh
Confidence            9999999999999999999999999999999988864


No 55 
>KOG0514|consensus
Probab=99.87  E-value=6e-22  Score=189.02  Aligned_cols=159  Identities=34%  Similarity=0.479  Sum_probs=145.1

Q ss_pred             cccCCCcHHHHHHHcCCHHHHHHHHhcC-CCcccccCCCChHHHHHHhc-----CcHHHHHHHHhCCCCCCCCCCCCCCC
Q psy904          176 IETNRNTALTLACFQGRHEVVSLLLDRK-ANVEHRAKTGLTPLMEAASG-----GYVEVGRVLLDKGADVNAPPVPSSRD  249 (596)
Q Consensus       176 ~~~~~~t~L~~A~~~~~~~ii~~Ll~~g-~~~~~~~~~g~t~L~~A~~~-----g~~~iv~~Ll~~g~~~~~~~~~~~g~  249 (596)
                      .+.+|+|+||+++.++++++|+.||+.| ++++..+..|+||+++++..     .+..+|..|+..| ++|.. -...|.
T Consensus       264 aDsNGNTALHYsVSHaNF~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mg-nVNaK-AsQ~gQ  341 (452)
T KOG0514|consen  264 ADSNGNTALHYAVSHANFDVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMG-DVNAK-ASQHGQ  341 (452)
T ss_pred             hcCCCCeeeeeeecccchHHHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhcc-Ccchh-hhhhcc
Confidence            3789999999999999999999999986 78999999999999998753     4677888999886 66765 345799


Q ss_pred             cHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCChHHHHHHhcCcHHHHHHHHHC-CCCcccCCCCCCCHHHHHHHcCCHH
Q psy904          250 TALTIAADKGHCRFVELLLSKGAQVEVKNKKGNSPLWLAANGGHLSVVELLCKH-GADIDSQDNRKVSCLMAAFRKGHVK  328 (596)
Q Consensus       250 t~L~~A~~~~~~~iv~~Ll~~g~di~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~-gad~~~~~~~g~t~L~~A~~~g~~~  328 (596)
                      |+|++|+.+|+.++|+.||..|+|+|+.|.+|.|+||+|+..||.+|+++||.. ++|+..+|.+|.|+|.+|...||.+
T Consensus       342 TALMLAVSHGr~d~vk~LLacgAdVNiQDdDGSTALMCA~EHGhkEivklLLA~p~cd~sLtD~DgSTAl~IAleagh~e  421 (452)
T KOG0514|consen  342 TALMLAVSHGRVDMVKALLACGADVNIQDDDGSTALMCAAEHGHKEIVKLLLAVPSCDISLTDVDGSTALSIALEAGHRE  421 (452)
T ss_pred             hhhhhhhhcCcHHHHHHHHHccCCCccccCCccHHHhhhhhhChHHHHHHHhccCcccceeecCCCchhhhhHHhcCchH
Confidence            999999999999999999999999999999999999999999999999999985 7999999999999999999999999


Q ss_pred             HHHHHHhC
Q psy904          329 AVRWMVNH  336 (596)
Q Consensus       329 iv~~Ll~~  336 (596)
                      |.-+|..+
T Consensus       422 Ia~mlYa~  429 (452)
T KOG0514|consen  422 IAVMLYAH  429 (452)
T ss_pred             HHHHHHHH
Confidence            99888765


No 56 
>KOG0514|consensus
Probab=99.86  E-value=1.9e-21  Score=185.60  Aligned_cols=162  Identities=31%  Similarity=0.448  Sum_probs=139.2

Q ss_pred             CccCCCCCcHHHHHHhcCcHHHHHHHHHCC-CCccccCCCCCcHHHHHHHc-----CCHHHHHHHHhCCCCccccccCCC
Q psy904            5 SETESNHDTALTLACAGGHEELVELLLSRG-ADIEHRDKKGFTPLILAATA-----GHDKVVDILLNHKADMEAQSERTK   78 (596)
Q Consensus         5 ~~~d~~g~t~L~~A~~~g~~~ivk~Ll~~g-~~i~~~d~~g~t~L~~A~~~-----g~~eiv~~Ll~~~~~~~~~~~~~~   78 (596)
                      ...|+||+|+||||+..+++++|+.||+.| ++++..|.-|+||+|+|+..     .++.+|..|+.-| +++..-...|
T Consensus       262 NlaDsNGNTALHYsVSHaNF~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mg-nVNaKAsQ~g  340 (452)
T KOG0514|consen  262 NLADSNGNTALHYAVSHANFDVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMG-DVNAKASQHG  340 (452)
T ss_pred             hhhcCCCCeeeeeeecccchHHHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhcc-Ccchhhhhhc
Confidence            456899999999999999999999999987 69999999999999999865     4778898888876 5666666789


Q ss_pred             ChHHHHHHHCCcHHHHHHHHhCCCCccCCCCCCCcHHHHHHhcCCHHHHHHHHhCCCCccccCCCCCCCcHHHHHHHcCC
Q psy904           79 DTPLSLACSGGRYEVVELLLTRGANKEHRNVSDYTPLSLAASGGYVNIIKLLLTHGAEINSRTGSKLGISPLMLAAMNGH  158 (596)
Q Consensus        79 ~t~L~~A~~~g~~eivk~LL~~g~~~~~~d~~g~t~L~~A~~~g~~eiv~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~g~  158 (596)
                      .|+|++|+..|+.++|+.||..|+++|..|.+|.|+|++|+..||.+|+++||.. +..+....+..|.|+|.+|...||
T Consensus       341 QTALMLAVSHGr~d~vk~LLacgAdVNiQDdDGSTALMCA~EHGhkEivklLLA~-p~cd~sLtD~DgSTAl~IAleagh  419 (452)
T KOG0514|consen  341 QTALMLAVSHGRVDMVKALLACGADVNIQDDDGSTALMCAAEHGHKEIVKLLLAV-PSCDISLTDVDGSTALSIALEAGH  419 (452)
T ss_pred             chhhhhhhhcCcHHHHHHHHHccCCCccccCCccHHHhhhhhhChHHHHHHHhcc-CcccceeecCCCchhhhhHHhcCc
Confidence            9999999999999999999999999999999999999999999999999999976 223333333448899999999998


Q ss_pred             HHHHHHHHhc
Q psy904          159 TAAVKLLLDM  168 (596)
Q Consensus       159 ~eiv~~Ll~~  168 (596)
                      -+|.-+|..+
T Consensus       420 ~eIa~mlYa~  429 (452)
T KOG0514|consen  420 REIAVMLYAH  429 (452)
T ss_pred             hHHHHHHHHH
Confidence            8887776543


No 57 
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.86  E-value=5.8e-21  Score=174.76  Aligned_cols=139  Identities=15%  Similarity=0.248  Sum_probs=90.3

Q ss_pred             CCCcccccCCCChHHHHHHhcCcH----HHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHcCcHH---HHHHHHHCCCCCC
Q psy904          203 KANVEHRAKTGLTPLMEAASGGYV----EVGRVLLDKGADVNAPPVPSSRDTALTIAADKGHCR---FVELLLSKGAQVE  275 (596)
Q Consensus       203 g~~~~~~~~~g~t~L~~A~~~g~~----~iv~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~---iv~~Ll~~g~di~  275 (596)
                      +++++..+..+.++||.|+..|+.    +++++|++.|+.++.  .+..|.||||+|+..|+.+   ++++|+++|++++
T Consensus        10 ~~~~~~~~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~~~--~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin   87 (166)
T PHA02743         10 NLGAVEIDEDEQNTFLRICRTGNIYELMEVAPFISGDGHLLHR--YDHHGRQCTHMVAWYDRANAVMKIELLVNMGADIN   87 (166)
T ss_pred             chHHhhhccCCCcHHHHHHHcCCHHHHHHHHHHHhhcchhhhc--cCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCCC
Confidence            444555555666666666666665    444556666665554  4456667777777666543   3567777777777


Q ss_pred             CCC-CCCChHHHHHHhcCcHHHHHHHHH-CCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHhCcCCCCCc
Q psy904          276 VKN-KKGNSPLWLAANGGHLSVVELLCK-HGADIDSQDNRKVSCLMAAFRKGHVKAVRWMVNHVAQFPSD  343 (596)
Q Consensus       276 ~~d-~~g~TpL~~A~~~g~~~iv~~Ll~-~gad~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~  343 (596)
                      .++ ..|.||||+|+..|+.+++++|+. .|++++.++..|.||||+|+..++.+++++|+.+|+++..+
T Consensus        88 ~~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~  157 (166)
T PHA02743         88 ARELGTGNTLLHIAASTKNYELAEWLCRQLGVNLGAINYQHETAYHIAYKMRDRRMMEILRANGAVCDDP  157 (166)
T ss_pred             CCCCCCCCcHHHHHHHhCCHHHHHHHHhccCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCc
Confidence            666 367777777777777777777774 57777777777777777777777777777777777665544


No 58 
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.84  E-value=2.1e-20  Score=171.03  Aligned_cols=136  Identities=20%  Similarity=0.209  Sum_probs=121.0

Q ss_pred             cCCCcHHHHHHHcCCH----HHHHHHHhcCCCcccccCCCChHHHHHHhcCcHHH---HHHHHhCCCCCCCCCCC-CCCC
Q psy904          178 TNRNTALTLACFQGRH----EVVSLLLDRKANVEHRAKTGLTPLMEAASGGYVEV---GRVLLDKGADVNAPPVP-SSRD  249 (596)
Q Consensus       178 ~~~~t~L~~A~~~~~~----~ii~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~i---v~~Ll~~g~~~~~~~~~-~~g~  249 (596)
                      ..+.++||.||..|+.    +++++|++.|..++..+..|.||||+|+..|+.++   +++|+..|++++.  .+ ..|.
T Consensus        18 ~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin~--~d~~~g~   95 (166)
T PHA02743         18 EDEQNTFLRICRTGNIYELMEVAPFISGDGHLLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGADINA--RELGTGN   95 (166)
T ss_pred             cCCCcHHHHHHHcCCHHHHHHHHHHHhhcchhhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCCCC--CCCCCCC
Confidence            4556789999999988    56667788899999899999999999999987654   7899999999987  44 4799


Q ss_pred             cHHHHHHHcCcHHHHHHHHH-CCCCCCCCCCCCChHHHHHHhcCcHHHHHHHHHCCCCcccCCCCCC
Q psy904          250 TALTIAADKGHCRFVELLLS-KGAQVEVKNKKGNSPLWLAANGGHLSVVELLCKHGADIDSQDNRKV  315 (596)
Q Consensus       250 t~L~~A~~~~~~~iv~~Ll~-~g~di~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~~~~g~  315 (596)
                      ||||+|+..++.+++++|+. .|++++..|..|.||||+|+..++.+++++|+.+|++++.++..|.
T Consensus        96 TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~  162 (166)
T PHA02743         96 TLLHIAASTKNYELAEWLCRQLGVNLGAINYQHETAYHIAYKMRDRRMMEILRANGAVCDDPLSIGL  162 (166)
T ss_pred             cHHHHHHHhCCHHHHHHHHhccCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcccCCc
Confidence            99999999999999999995 8999999999999999999999999999999999999999887764


No 59 
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.84  E-value=1.6e-19  Score=177.94  Aligned_cols=151  Identities=20%  Similarity=0.215  Sum_probs=127.4

Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHhcCCCccccc----CCCChHHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCCCcHHHH
Q psy904          179 NRNTALTLACFQGRHEVVSLLLDRKANVEHRA----KTGLTPLMEAASGGYVEVGRVLLDKGADVNAPPVPSSRDTALTI  254 (596)
Q Consensus       179 ~~~t~L~~A~~~~~~~ii~~Ll~~g~~~~~~~----~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~g~t~L~~  254 (596)
                      ...++||.|+..++.+++++|+++|++++..+    ..|.||||+|+..|+.+++++|+++|++++... +..|.||||+
T Consensus        32 ~~~~lL~~A~~~~~~eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~-~~~g~TpLh~  110 (300)
T PHA02884         32 CIANILYSSIKFHYTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYA-EEAKITPLYI  110 (300)
T ss_pred             CCCHHHHHHHHcCCHHHHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCccc-CCCCCCHHHH
Confidence            34477888888899999999999999998763    589999999999999999999999999998631 3468999999


Q ss_pred             HHHcCcHHHHHHHHHCCCCCCCCCCCCChHHHHHHhcCcHHHHHHHHHCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHH
Q psy904          255 AADKGHCRFVELLLSKGAQVEVKNKKGNSPLWLAANGGHLSVVELLCKHGADIDSQDNRKVSCLMAAFRKGHVKAVRWMV  334 (596)
Q Consensus       255 A~~~~~~~iv~~Ll~~g~di~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~~iv~~Ll  334 (596)
                      |+..++.+++++|+.+|++++.+|..|.||||+|+..++..++.++..  ..   .+..+.+|++++   ++.+++++|+
T Consensus       111 Aa~~~~~eivklLL~~GAdin~kd~~G~TpL~~A~~~~~~~~~~~~~~--~~---~~~~~~~~~~~~---~n~ei~~~Li  182 (300)
T PHA02884        111 SVLHGCLKCLEILLSYGADINIQTNDMVTPIELALMICNNFLAFMICD--NE---ISNFYKHPKKIL---INFDILKILV  182 (300)
T ss_pred             HHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCChhHHHHhcC--Cc---ccccccChhhhh---ccHHHHHHHH
Confidence            999999999999999999999999999999999999888888766653  22   355667888875   4789999999


Q ss_pred             hCcC
Q psy904          335 NHVA  338 (596)
Q Consensus       335 ~~~~  338 (596)
                      +|+.
T Consensus       183 sh~v  186 (300)
T PHA02884        183 SHFI  186 (300)
T ss_pred             HHHH
Confidence            9887


No 60 
>PHA02741 hypothetical protein; Provisional
Probab=99.83  E-value=7.8e-20  Score=168.09  Aligned_cols=130  Identities=23%  Similarity=0.327  Sum_probs=107.5

Q ss_pred             cccCCCChHHHHHHhcCcHHHHHHHHh------CCCCCCCCCCCCCCCcHHHHHHHcCc----HHHHHHHHHCCCCCCCC
Q psy904          208 HRAKTGLTPLMEAASGGYVEVGRVLLD------KGADVNAPPVPSSRDTALTIAADKGH----CRFVELLLSKGAQVEVK  277 (596)
Q Consensus       208 ~~~~~g~t~L~~A~~~g~~~iv~~Ll~------~g~~~~~~~~~~~g~t~L~~A~~~~~----~~iv~~Ll~~g~di~~~  277 (596)
                      ..+..|.||||+|+..|+.+++++|+.      .|++++.  .+..|.||||+|+..|+    .+++++|+++|++++.+
T Consensus        16 ~~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~--~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin~~   93 (169)
T PHA02741         16 EKNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNA--TDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADINAQ   93 (169)
T ss_pred             ccccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhc--cCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCCCCC
Confidence            456678888888888888888887753      2455554  56778899999998888    57888999999999988


Q ss_pred             CC-CCChHHHHHHhcCcHHHHHHHHH-CCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHhCcCC
Q psy904          278 NK-KGNSPLWLAANGGHLSVVELLCK-HGADIDSQDNRKVSCLMAAFRKGHVKAVRWMVNHVAQ  339 (596)
Q Consensus       278 d~-~g~TpL~~A~~~g~~~iv~~Ll~-~gad~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~  339 (596)
                      +. .|.||||+|+..++.+++++|+. .|++++..|..|.|||++|+..++.+++++|+..++.
T Consensus        94 ~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n~~g~tpL~~A~~~~~~~iv~~L~~~~~~  157 (169)
T PHA02741         94 EMLEGDTALHLAAHRRDHDLAEWLCCQPGIDLHFCNADNKSPFELAIDNEDVAMMQILREIVAT  157 (169)
T ss_pred             CcCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCCHHHHHHHCCCHHHHHHHHHHHHH
Confidence            85 89999999999999999999997 5899998899999999999999999999998887653


No 61 
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.82  E-value=1.9e-19  Score=177.44  Aligned_cols=154  Identities=22%  Similarity=0.227  Sum_probs=122.7

Q ss_pred             cCCCCCcHHHHHHhcCcHHHHHHHHHCCCCccccC----CCCCcHHHHHHHcCCHHHHHHHHhCCCCccccccCCCChHH
Q psy904            7 TESNHDTALTLACAGGHEELVELLLSRGADIEHRD----KKGFTPLILAATAGHDKVVDILLNHKADMEAQSERTKDTPL   82 (596)
Q Consensus         7 ~d~~g~t~L~~A~~~g~~~ivk~Ll~~g~~i~~~d----~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~L   82 (596)
                      +...-.++||.|+..|+.++|++|+++|++++..+    ..|.||||+|+..|+.+++++|+++|++++...+..|.|||
T Consensus        29 d~~~~~~lL~~A~~~~~~eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~g~TpL  108 (300)
T PHA02884         29 NKICIANILYSSIKFHYTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAKITPL  108 (300)
T ss_pred             CcCCCCHHHHHHHHcCCHHHHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCCCCCHH
Confidence            34444567788888899999999999999998864    57899999999999999999999999988876556788999


Q ss_pred             HHHHHCCcHHHHHHHHhCCCCccCCCCCCCcHHHHHHhcCCHHHHHHHHhCCCCccccCCCCCCCcHHHHHHHcCCHHHH
Q psy904           83 SLACSGGRYEVVELLLTRGANKEHRNVSDYTPLSLAASGGYVNIIKLLLTHGAEINSRTGSKLGISPLMLAAMNGHTAAV  162 (596)
Q Consensus        83 ~~A~~~g~~eivk~LL~~g~~~~~~d~~g~t~L~~A~~~g~~eiv~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~g~~eiv  162 (596)
                      |+|+..|+.+++++|+.+|++++..+..|.||||+|+..++..++..+...+  .     +.++.+|++.+   ++.+++
T Consensus       109 h~Aa~~~~~eivklLL~~GAdin~kd~~G~TpL~~A~~~~~~~~~~~~~~~~--~-----~~~~~~~~~~~---~n~ei~  178 (300)
T PHA02884        109 YISVLHGCLKCLEILLSYGADINIQTNDMVTPIELALMICNNFLAFMICDNE--I-----SNFYKHPKKIL---INFDIL  178 (300)
T ss_pred             HHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCChhHHHHhcCCc--c-----cccccChhhhh---ccHHHH
Confidence            9999999999999999999999999999999999999888888775554322  1     22355676654   467888


Q ss_pred             HHHHhcCC
Q psy904          163 KLLLDMGS  170 (596)
Q Consensus       163 ~~Ll~~~~  170 (596)
                      ++|+.++.
T Consensus       179 ~~Lish~v  186 (300)
T PHA02884        179 KILVSHFI  186 (300)
T ss_pred             HHHHHHHH
Confidence            88877665


No 62 
>PHA02741 hypothetical protein; Provisional
Probab=99.80  E-value=4.4e-19  Score=163.11  Aligned_cols=129  Identities=22%  Similarity=0.286  Sum_probs=94.5

Q ss_pred             cCCCCCcHHHHHHhcCcHHHHHHHHH------CCCCccccCCCCCcHHHHHHHcCC----HHHHHHHHhCCCCccccccC
Q psy904            7 TESNHDTALTLACAGGHEELVELLLS------RGADIEHRDKKGFTPLILAATAGH----DKVVDILLNHKADMEAQSER   76 (596)
Q Consensus         7 ~d~~g~t~L~~A~~~g~~~ivk~Ll~------~g~~i~~~d~~g~t~L~~A~~~g~----~eiv~~Ll~~~~~~~~~~~~   76 (596)
                      .+..|.|+||+||..|+.++|++|+.      .|++++..|..|.||||+|+..|+    .+++++|+..|++++.....
T Consensus        17 ~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin~~~~~   96 (169)
T PHA02741         17 KNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADINAQEML   96 (169)
T ss_pred             cccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCCCCCCcC
Confidence            45667788888888888888777743      256777777777888888887777    47777777777777655334


Q ss_pred             CCChHHHHHHHCCcHHHHHHHHh-CCCCccCCCCCCCcHHHHHHhcCCHHHHHHHHhCCC
Q psy904           77 TKDTPLSLACSGGRYEVVELLLT-RGANKEHRNVSDYTPLSLAASGGYVNIIKLLLTHGA  135 (596)
Q Consensus        77 ~~~t~L~~A~~~g~~eivk~LL~-~g~~~~~~d~~g~t~L~~A~~~g~~eiv~~Ll~~g~  135 (596)
                      .|.||||+|+..++.+++++|+. .|++++..+..|.||||+|+..++.+++++|+..+.
T Consensus        97 ~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n~~g~tpL~~A~~~~~~~iv~~L~~~~~  156 (169)
T PHA02741         97 EGDTALHLAAHRRDHDLAEWLCCQPGIDLHFCNADNKSPFELAIDNEDVAMMQILREIVA  156 (169)
T ss_pred             CCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCCHHHHHHHCCCHHHHHHHHHHHH
Confidence            67777777777777777777776 477777777777777777777777777777776543


No 63 
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.80  E-value=2e-19  Score=163.00  Aligned_cols=132  Identities=20%  Similarity=0.233  Sum_probs=102.4

Q ss_pred             ccccCCCChHHHHHHhcCcHHHHHHHHhCCC--CCC---CCCCCCCCCcHHHHHHHcCcHH---HHHHHHHCCCCCCCCC
Q psy904          207 EHRAKTGLTPLMEAASGGYVEVGRVLLDKGA--DVN---APPVPSSRDTALTIAADKGHCR---FVELLLSKGAQVEVKN  278 (596)
Q Consensus       207 ~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~--~~~---~~~~~~~g~t~L~~A~~~~~~~---iv~~Ll~~g~di~~~d  278 (596)
                      +..+..|.||||+|+..|+.  +.+++..+.  +.+   ....+..|.||||+|+..|+.+   ++++|+++|++++.++
T Consensus        11 ~~~d~~g~tpLh~A~~~g~~--~~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadin~~~   88 (154)
T PHA02736         11 SEPDIEGENILHYLCRNGGV--TDLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGADINGKE   88 (154)
T ss_pred             HhcCCCCCCHHHHHHHhCCH--HHHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHcCCCccccC
Confidence            44566788888888888773  222222211  111   1123567889999999988764   6888999999999988


Q ss_pred             -CCCChHHHHHHhcCcHHHHHHHHH-CCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHhCcCCC
Q psy904          279 -KKGNSPLWLAANGGHLSVVELLCK-HGADIDSQDNRKVSCLMAAFRKGHVKAVRWMVNHVAQF  340 (596)
Q Consensus       279 -~~g~TpL~~A~~~g~~~iv~~Ll~-~gad~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~  340 (596)
                       ..|.||||+|+..|+.+++++|+. .|++++..+..|.|||++|+..|+.+++++|+.+|++.
T Consensus        89 ~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g~tpL~~A~~~~~~~i~~~Ll~~ga~~  152 (154)
T PHA02736         89 RVFGNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKTPYYVACERHDAKMMNILRAKGAQC  152 (154)
T ss_pred             CCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCccccCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence             489999999999999999999997 48999999999999999999999999999999998864


No 64 
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.77  E-value=1.2e-18  Score=157.91  Aligned_cols=130  Identities=22%  Similarity=0.348  Sum_probs=89.3

Q ss_pred             ccCCCCCcHHHHHHhcCcHHHHHHHHHCCC--C-----ccccCCCCCcHHHHHHHcCCHH---HHHHHHhCCCCcccccc
Q psy904            6 ETESNHDTALTLACAGGHEELVELLLSRGA--D-----IEHRDKKGFTPLILAATAGHDK---VVDILLNHKADMEAQSE   75 (596)
Q Consensus         6 ~~d~~g~t~L~~A~~~g~~~ivk~Ll~~g~--~-----i~~~d~~g~t~L~~A~~~g~~e---iv~~Ll~~~~~~~~~~~   75 (596)
                      ..|.+|.||||+||..|++  +.+++..+.  +     ++..|..|.||||+|+..|+.+   ++++|+..|++++...+
T Consensus        12 ~~d~~g~tpLh~A~~~g~~--~~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadin~~~~   89 (154)
T PHA02736         12 EPDIEGENILHYLCRNGGV--TDLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGADINGKER   89 (154)
T ss_pred             hcCCCCCCHHHHHHHhCCH--HHHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHcCCCccccCC
Confidence            4456778888888888773  333322211  1     2345677777888777777663   56777777777766544


Q ss_pred             CCCChHHHHHHHCCcHHHHHHHHh-CCCCccCCCCCCCcHHHHHHhcCCHHHHHHHHhCCCCc
Q psy904           76 RTKDTPLSLACSGGRYEVVELLLT-RGANKEHRNVSDYTPLSLAASGGYVNIIKLLLTHGAEI  137 (596)
Q Consensus        76 ~~~~t~L~~A~~~g~~eivk~LL~-~g~~~~~~d~~g~t~L~~A~~~g~~eiv~~Ll~~g~~~  137 (596)
                      ..|.||||+|+..|+.+++++|+. .|++++..+..|.||||+|+..|+.+++++|+.+|++.
T Consensus        90 ~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g~tpL~~A~~~~~~~i~~~Ll~~ga~~  152 (154)
T PHA02736         90 VFGNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKTPYYVACERHDAKMMNILRAKGAQC  152 (154)
T ss_pred             CCCCcHHHHHHHhCCHHHHHHHHhCCCCCCccccCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence            567777777777777777777776 47777777777777777777777777777777777654


No 65 
>KOG0512|consensus
Probab=99.76  E-value=1.3e-17  Score=143.44  Aligned_cols=142  Identities=30%  Similarity=0.285  Sum_probs=122.1

Q ss_pred             cHHHHHHHcCCHHHHHHHHhcCCC-cccccCCCChHHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHcCc
Q psy904          182 TALTLACFQGRHEVVSLLLDRKAN-VEHRAKTGLTPLMEAASGGYVEVGRVLLDKGADVNAPPVPSSRDTALTIAADKGH  260 (596)
Q Consensus       182 t~L~~A~~~~~~~ii~~Ll~~g~~-~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~  260 (596)
                      ..+..|+..+.+..|+.||+..++ +|.+|.+|+||||.|+.+|+++||..|+..|++++.  ....|.||||.||...+
T Consensus        65 rl~lwaae~nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a--~T~~GWTPLhSAckWnN  142 (228)
T KOG0512|consen   65 RLLLWAAEKNRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEA--KTNEGWTPLHSACKWNN  142 (228)
T ss_pred             HHHHHHHhhccHHHHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHccCCccc--ccccCccchhhhhcccc
Confidence            456678888888888888876554 788899999999999999999999999999999888  44789999999999999


Q ss_pred             HHHHHHHHHCCCCCCCCCCCCChHHHHHHhcCcHH-HHHHHH-HCCCCcccCCCCCCCHHHHHHHcC
Q psy904          261 CRFVELLLSKGAQVEVKNKKGNSPLWLAANGGHLS-VVELLC-KHGADIDSQDNRKVSCLMAAFRKG  325 (596)
Q Consensus       261 ~~iv~~Ll~~g~di~~~d~~g~TpL~~A~~~g~~~-iv~~Ll-~~gad~~~~~~~g~t~L~~A~~~g  325 (596)
                      ++++-+||++|+|+|.......||||+|+...+.. .+.+|+ ..++++...+..+.||+.+|-+.+
T Consensus       143 ~~va~~LLqhgaDVnA~t~g~ltpLhlaa~~rn~r~t~~~Ll~dryi~pg~~nn~eeta~~iARRT~  209 (228)
T KOG0512|consen  143 FEVAGRLLQHGADVNAQTKGLLTPLHLAAGNRNSRDTLELLLHDRYIHPGLKNNLEETAFDIARRTS  209 (228)
T ss_pred             hhHHHHHHhccCcccccccccchhhHHhhcccchHHHHHHHhhccccChhhhcCccchHHHHHHHhh
Confidence            99999999999999999999999999999876654 555555 457888888999999999997765


No 66 
>KOG0512|consensus
Probab=99.75  E-value=2.1e-17  Score=142.17  Aligned_cols=147  Identities=31%  Similarity=0.325  Sum_probs=116.9

Q ss_pred             CCCcHHHHHHhcCcHHHHHHHHHCCCC-ccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccccCCCChHHHHHHHC
Q psy904           10 NHDTALTLACAGGHEELVELLLSRGAD-IEHRDKKGFTPLILAATAGHDKVVDILLNHKADMEAQSERTKDTPLSLACSG   88 (596)
Q Consensus        10 ~g~t~L~~A~~~g~~~ivk~Ll~~g~~-i~~~d~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~~~   88 (596)
                      +..-.+.+|+..|.+..|+.||+..++ +|.+|.+|+||||-|+++|+.+||+.|+..|++....+ ..|+||||.||..
T Consensus        62 dp~rl~lwaae~nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~T-~~GWTPLhSAckW  140 (228)
T KOG0512|consen   62 DPIRLLLWAAEKNRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEAKT-NEGWTPLHSACKW  140 (228)
T ss_pred             CHHHHHHHHHhhccHHHHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHccCCccccc-ccCccchhhhhcc
Confidence            334567789999999999999987654 89999999999999999999999999999999988765 4799999999999


Q ss_pred             CcHHHHHHHHhCCCCccCCCCCCCcHHHHHHhcCCHHHHHHHHhCCCCccccCCCCCCCcHHHHHHHcC
Q psy904           89 GRYEVVELLLTRGANKEHRNVSDYTPLSLAASGGYVNIIKLLLTHGAEINSRTGSKLGISPLMLAAMNG  157 (596)
Q Consensus        89 g~~eivk~LL~~g~~~~~~d~~g~t~L~~A~~~g~~eiv~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~g  157 (596)
                      ++++++-+||++|++++.......||||+|+.+.+.-+.-.+|-....+.....+..+.||+.+|-+.+
T Consensus       141 nN~~va~~LLqhgaDVnA~t~g~ltpLhlaa~~rn~r~t~~~Ll~dryi~pg~~nn~eeta~~iARRT~  209 (228)
T KOG0512|consen  141 NNFEVAGRLLQHGADVNAQTKGLLTPLHLAAGNRNSRDTLELLLHDRYIHPGLKNNLEETAFDIARRTS  209 (228)
T ss_pred             cchhHHHHHHhccCcccccccccchhhHHhhcccchHHHHHHHhhccccChhhhcCccchHHHHHHHhh
Confidence            999999999999999999988889999999987776543333333333333334444778888876664


No 67 
>PF12796 Ank_2:  Ankyrin repeats (3 copies);  InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it.  The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.72  E-value=4.3e-17  Score=132.92  Aligned_cols=89  Identities=44%  Similarity=0.711  Sum_probs=68.2

Q ss_pred             HHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCChHHHHHHhcCcHHH
Q psy904          217 LMEAASGGYVEVGRVLLDKGADVNAPPVPSSRDTALTIAADKGHCRFVELLLSKGAQVEVKNKKGNSPLWLAANGGHLSV  296 (596)
Q Consensus       217 L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~g~di~~~d~~g~TpL~~A~~~g~~~i  296 (596)
                      ||+|+..|+.+++++|++.+.+++.      |.||||+|+..|+.+++++|+++|++++..|..|.||||+|+..|+.++
T Consensus         1 L~~A~~~~~~~~~~~ll~~~~~~~~------~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~   74 (89)
T PF12796_consen    1 LHIAAQNGNLEILKFLLEKGADINL------GNTALHYAAENGNLEIVKLLLENGADINSQDKNGNTALHYAAENGNLEI   74 (89)
T ss_dssp             HHHHHHTTTHHHHHHHHHTTSTTTS------SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BSTTSSBHHHHHHHTTHHHH
T ss_pred             CHHHHHcCCHHHHHHHHHCcCCCCC------CCCHHHHHHHcCCHHHHHHHHHhcccccccCCCCCCHHHHHHHcCCHHH
Confidence            6778888888888888887766553      6678888888888888888888888888888888888888888888888


Q ss_pred             HHHHHHCCCCcccCC
Q psy904          297 VELLCKHGADIDSQD  311 (596)
Q Consensus       297 v~~Ll~~gad~~~~~  311 (596)
                      +++|+++|++++.+|
T Consensus        75 ~~~Ll~~g~~~~~~n   89 (89)
T PF12796_consen   75 VKLLLEHGADVNIRN   89 (89)
T ss_dssp             HHHHHHTTT-TTSS-
T ss_pred             HHHHHHcCCCCCCcC
Confidence            888888888877654


No 68 
>KOG3676|consensus
Probab=99.72  E-value=1.1e-16  Score=169.00  Aligned_cols=212  Identities=24%  Similarity=0.264  Sum_probs=134.9

Q ss_pred             cHHHHHHhcCCHHHHHHHHhCCC-------CccccCCCCCCCcHHHHHHHc---CCHHHHHHHHhcCC----Cccccccc
Q psy904          113 TPLSLAASGGYVNIIKLLLTHGA-------EINSRTGSKLGISPLMLAAMN---GHTAAVKLLLDMGS----DINAQIET  178 (596)
Q Consensus       113 t~L~~A~~~g~~eiv~~Ll~~g~-------~~~~~~~~~~g~t~L~~A~~~---g~~eiv~~Ll~~~~----~~~~~~~~  178 (596)
                      .++..|...+....+..|+..+-       +.........|.|+||.|..+   ++.++++.|++.-+    ++-.....
T Consensus       103 ~~~~~~~~~~~l~~l~~l~~~~~~~k~r~~~w~~~~RGa~GET~Lh~~lL~~~~~~n~la~~LL~~~p~lind~~~~eeY  182 (782)
T KOG3676|consen  103 DALFIADSEGALSDLDGLLKFLRKSKYRLTDWKLNERGATGETLLHKALLNLSDGHNELARVLLEIFPKLINDIYTSEEY  182 (782)
T ss_pred             hhhhhccccccHHHHhccchhhhhhhhhhhhhccccccchhhhHHHHHHhcCchhHHHHHHHHHHHhHHHhhhhhhhHhh
Confidence            44455555555555444443331       122222233355666666543   33355555555432    11122234


Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHhcCCCcccccCCCChHHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHc
Q psy904          179 NRNTALTLACFQGRHEVVSLLLDRKANVEHRAKTGLTPLMEAASGGYVEVGRVLLDKGADVNAPPVPSSRDTALTIAADK  258 (596)
Q Consensus       179 ~~~t~L~~A~~~~~~~ii~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~  258 (596)
                      .|.||||+|+.+.+.++|.+|+..|+|++.+.....   ..+--.   ...+      ...|++..-.-|..||..|+..
T Consensus       183 ~GqSaLHiAIv~~~~~~V~lLl~~gADV~aRa~G~F---F~~~dq---k~~r------k~T~Y~G~~YfGEyPLSfAAC~  250 (782)
T KOG3676|consen  183 YGQSALHIAIVNRDAELVRLLLAAGADVHARACGAF---FCPDDQ---KASR------KSTNYTGYFYFGEYPLSFAACT  250 (782)
T ss_pred             cCcchHHHHHHhccHHHHHHHHHcCCchhhHhhccc---cCcccc---cccc------cccCCcceeeeccCchHHHHHc
Confidence            455666666666666666666666665544321100   000000   0000      0111111234577999999999


Q ss_pred             CcHHHHHHHHHCCCCCCCCCCCCChHHHHHHhcCcHHHHHHHHHCCCC--cccCCCCCCCHHHHHHHcCCHHHHHHHHhC
Q psy904          259 GHCRFVELLLSKGAQVEVKNKKGNSPLWLAANGGHLSVVELLCKHGAD--IDSQDNRKVSCLMAAFRKGHVKAVRWMVNH  336 (596)
Q Consensus       259 ~~~~iv~~Ll~~g~di~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad--~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~  336 (596)
                      ++.+++++|+++|+|++.+|.+|+|.||..+..-..+|..+++.+|++  ...+|..|.|||.+|++.|..+|++.+++.
T Consensus       251 nq~eivrlLl~~gAd~~aqDS~GNTVLH~lVi~~~~~My~~~L~~ga~~l~~v~N~qgLTPLtLAaklGk~emf~~ile~  330 (782)
T KOG3676|consen  251 NQPEIVRLLLAHGADPNAQDSNGNTVLHMLVIHFVTEMYDLALELGANALEHVRNNQGLTPLTLAAKLGKKEMFQHILER  330 (782)
T ss_pred             CCHHHHHHHHhcCCCCCccccCCChHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCChHHHHHHhhhHHHHHHHHHh
Confidence            999999999999999999999999999999999999999999999999  889999999999999999999999999988


No 69 
>KOG0195|consensus
Probab=99.71  E-value=2.8e-17  Score=152.40  Aligned_cols=118  Identities=33%  Similarity=0.440  Sum_probs=86.0

Q ss_pred             cCCCcccccCCCChHHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCC
Q psy904          202 RKANVEHRAKTGLTPLMEAASGGYVEVGRVLLDKGADVNAPPVPSSRDTALTIAADKGHCRFVELLLSKGAQVEVKNKKG  281 (596)
Q Consensus       202 ~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~g~di~~~d~~g  281 (596)
                      ...+.|.-|..|.+|||+|+..|+..+++.|+..|+.+|.  .+....||||+|+..|+.++|..|++..+|+|..|..|
T Consensus        23 tehdln~gddhgfsplhwaakegh~aivemll~rgarvn~--tnmgddtplhlaaahghrdivqkll~~kadvnavnehg  100 (448)
T KOG0195|consen   23 TEHDLNVGDDHGFSPLHWAAKEGHVAIVEMLLSRGARVNS--TNMGDDTPLHLAAAHGHRDIVQKLLSRKADVNAVNEHG  100 (448)
T ss_pred             cccccccccccCcchhhhhhhcccHHHHHHHHhccccccc--ccCCCCcchhhhhhcccHHHHHHHHHHhcccchhhccC
Confidence            3455666667777777777777777777777777777776  33344577777777777777777777777777777777


Q ss_pred             ChHHHHHHhcCcHHHHHHHHHCCCCcccCCCCCCCHHHHH
Q psy904          282 NSPLWLAANGGHLSVVELLCKHGADIDSQDNRKVSCLMAA  321 (596)
Q Consensus       282 ~TpL~~A~~~g~~~iv~~Ll~~gad~~~~~~~g~t~L~~A  321 (596)
                      +|||||||..|+-.+.+-|+..|+-+++.|..|.|||..|
T Consensus       101 ntplhyacfwgydqiaedli~~ga~v~icnk~g~tpldka  140 (448)
T KOG0195|consen  101 NTPLHYACFWGYDQIAEDLISCGAAVNICNKKGMTPLDKA  140 (448)
T ss_pred             CCchhhhhhhcHHHHHHHHHhccceeeecccCCCCchhhh
Confidence            7777777777777777777777777777777777777765


No 70 
>KOG3676|consensus
Probab=99.69  E-value=3.3e-16  Score=165.43  Aligned_cols=211  Identities=27%  Similarity=0.250  Sum_probs=161.2

Q ss_pred             hHHHHHHHCCcHHHHHHHHhCC---------CCccCCCCCCCcHHHHHHhc---CCHHHHHHHHhCCCCcc---ccCCCC
Q psy904           80 TPLSLACSGGRYEVVELLLTRG---------ANKEHRNVSDYTPLSLAASG---GYVNIIKLLLTHGAEIN---SRTGSK  144 (596)
Q Consensus        80 t~L~~A~~~g~~eivk~LL~~g---------~~~~~~d~~g~t~L~~A~~~---g~~eiv~~Ll~~g~~~~---~~~~~~  144 (596)
                      .++..|...+.+.....|+..+         ++++.+...|.|.||.|..+   ++-+++..|++..+.+-   ......
T Consensus       103 ~~~~~~~~~~~l~~l~~l~~~~~~~k~r~~~w~~~~RGa~GET~Lh~~lL~~~~~~n~la~~LL~~~p~lind~~~~eeY  182 (782)
T KOG3676|consen  103 DALFIADSEGALSDLDGLLKFLRKSKYRLTDWKLNERGATGETLLHKALLNLSDGHNELARVLLEIFPKLINDIYTSEEY  182 (782)
T ss_pred             hhhhhccccccHHHHhccchhhhhhhhhhhhhccccccchhhhHHHHHHhcCchhHHHHHHHHHHHhHHHhhhhhhhHhh
Confidence            6777888888888777776655         56677777899999999873   45578888888654321   223345


Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccCCCChHHHHHHhcC
Q psy904          145 LGISPLMLAAMNGHTAAVKLLLDMGSDINAQIETNRNTALTLACFQGRHEVVSLLLDRKANVEHRAKTGLTPLMEAASGG  224 (596)
Q Consensus       145 ~g~t~L~~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~g~~~~~~~~~g~t~L~~A~~~g  224 (596)
                      +|.||||+|+.+.+.++|.+|+..|+|++......-..|=..  ...+         ...+....-+.|..||.+|+..+
T Consensus       183 ~GqSaLHiAIv~~~~~~V~lLl~~gADV~aRa~G~FF~~~dq--k~~r---------k~T~Y~G~~YfGEyPLSfAAC~n  251 (782)
T KOG3676|consen  183 YGQSALHIAIVNRDAELVRLLLAAGADVHARACGAFFCPDDQ--KASR---------KSTNYTGYFYFGEYPLSFAACTN  251 (782)
T ss_pred             cCcchHHHHHHhccHHHHHHHHHcCCchhhHhhccccCcccc--cccc---------cccCCcceeeeccCchHHHHHcC
Confidence            699999999999999999999999999876521110000000  0000         11222222356889999999999


Q ss_pred             cHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCC--CCCCCCCCChHHHHHHhcCcHHHHHHHHH
Q psy904          225 YVEVGRVLLDKGADVNAPPVPSSRDTALTIAADKGHCRFVELLLSKGAQ--VEVKNKKGNSPLWLAANGGHLSVVELLCK  302 (596)
Q Consensus       225 ~~~iv~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~g~d--i~~~d~~g~TpL~~A~~~g~~~iv~~Ll~  302 (596)
                      +.+++++|+++|+|++.  .|+.|+|.||+.+..-..++..+++++|++  ..++|+.|.|||.+|+..|..+|++.+++
T Consensus       252 q~eivrlLl~~gAd~~a--qDS~GNTVLH~lVi~~~~~My~~~L~~ga~~l~~v~N~qgLTPLtLAaklGk~emf~~ile  329 (782)
T KOG3676|consen  252 QPEIVRLLLAHGADPNA--QDSNGNTVLHMLVIHFVTEMYDLALELGANALEHVRNNQGLTPLTLAAKLGKKEMFQHILE  329 (782)
T ss_pred             CHHHHHHHHhcCCCCCc--cccCCChHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCChHHHHHHhhhHHHHHHHHH
Confidence            99999999999999988  678999999999999889999999999998  88899999999999999999999999988


Q ss_pred             C
Q psy904          303 H  303 (596)
Q Consensus       303 ~  303 (596)
                      .
T Consensus       330 ~  330 (782)
T KOG3676|consen  330 R  330 (782)
T ss_pred             h
Confidence            7


No 71 
>cd00204 ANK ankyrin repeats;  ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.69  E-value=6.3e-16  Score=134.10  Aligned_cols=124  Identities=47%  Similarity=0.716  Sum_probs=106.8

Q ss_pred             ccCCCChHHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCChHHHHH
Q psy904          209 RAKTGLTPLMEAASGGYVEVGRVLLDKGADVNAPPVPSSRDTALTIAADKGHCRFVELLLSKGAQVEVKNKKGNSPLWLA  288 (596)
Q Consensus       209 ~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~g~di~~~d~~g~TpL~~A  288 (596)
                      .+..|.||||.|+..|+.+++.+|+..+.+.+.  .+..|.||||.|+..++.+++++|+.+|++++..+..|.||+|+|
T Consensus         3 ~~~~g~t~l~~a~~~~~~~~i~~li~~~~~~~~--~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~l~~a   80 (126)
T cd00204           3 RDEDGRTPLHLAASNGHLEVVKLLLENGADVNA--KDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARDKDGNTPLHLA   80 (126)
T ss_pred             cCcCCCCHHHHHHHcCcHHHHHHHHHcCCCCCc--cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHH
Confidence            346688888888888888888888888877644  556888999999999999999999999888888888889999999


Q ss_pred             HhcCcHHHHHHHHHCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHH
Q psy904          289 ANGGHLSVVELLCKHGADIDSQDNRKVSCLMAAFRKGHVKAVRWMV  334 (596)
Q Consensus       289 ~~~g~~~iv~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~~iv~~Ll  334 (596)
                      +..++.+++++|+.+|.+++..+..|.||+++|+..++.+++++|+
T Consensus        81 ~~~~~~~~~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll  126 (126)
T cd00204          81 ARNGNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNGHLEVVKLLL  126 (126)
T ss_pred             HHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCHHHHHHhC
Confidence            9999999999999998888888888999999999999988888874


No 72 
>PF12796 Ank_2:  Ankyrin repeats (3 copies);  InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it.  The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.68  E-value=2.8e-16  Score=128.10  Aligned_cols=87  Identities=38%  Similarity=0.612  Sum_probs=81.7

Q ss_pred             HHHHHHcCcHHHHHHHHHCCCCCCCCCCCCChHHHHHHhcCcHHHHHHHHHCCCCcccCCCCCCCHHHHHHHcCCHHHHH
Q psy904          252 LTIAADKGHCRFVELLLSKGAQVEVKNKKGNSPLWLAANGGHLSVVELLCKHGADIDSQDNRKVSCLMAAFRKGHVKAVR  331 (596)
Q Consensus       252 L~~A~~~~~~~iv~~Ll~~g~di~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~~iv~  331 (596)
                      ||+|+..|+++++++|++.+.+++.    |.||||+|+..|+.+++++|+++|++++.++..|.||||+|+.+|+.++++
T Consensus         1 L~~A~~~~~~~~~~~ll~~~~~~~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~   76 (89)
T PF12796_consen    1 LHIAAQNGNLEILKFLLEKGADINL----GNTALHYAAENGNLEIVKLLLENGADINSQDKNGNTALHYAAENGNLEIVK   76 (89)
T ss_dssp             HHHHHHTTTHHHHHHHHHTTSTTTS----SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BSTTSSBHHHHHHHTTHHHHHH
T ss_pred             CHHHHHcCCHHHHHHHHHCcCCCCC----CCCHHHHHHHcCCHHHHHHHHHhcccccccCCCCCCHHHHHHHcCCHHHHH
Confidence            7999999999999999999988887    899999999999999999999999999999999999999999999999999


Q ss_pred             HHHhCcCCCCC
Q psy904          332 WMVNHVAQFPS  342 (596)
Q Consensus       332 ~Ll~~~~~~~~  342 (596)
                      +|+++|+++..
T Consensus        77 ~Ll~~g~~~~~   87 (89)
T PF12796_consen   77 LLLEHGADVNI   87 (89)
T ss_dssp             HHHHTTT-TTS
T ss_pred             HHHHcCCCCCC
Confidence            99999998654


No 73 
>KOG0195|consensus
Probab=99.67  E-value=9.6e-17  Score=148.88  Aligned_cols=131  Identities=34%  Similarity=0.347  Sum_probs=110.3

Q ss_pred             cccCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccCCCChHHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCCCcHHHHH
Q psy904          176 IETNRNTALTLACFQGRHEVVSLLLDRKANVEHRAKTGLTPLMEAASGGYVEVGRVLLDKGADVNAPPVPSSRDTALTIA  255 (596)
Q Consensus       176 ~~~~~~t~L~~A~~~~~~~ii~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~g~t~L~~A  255 (596)
                      .+..|.+|||+|+..|+..+++.|+..|+.+|..+....||||+|+..|+-++|+.|++..+|+|.  ++..|+||||+|
T Consensus        30 gddhgfsplhwaakegh~aivemll~rgarvn~tnmgddtplhlaaahghrdivqkll~~kadvna--vnehgntplhya  107 (448)
T KOG0195|consen   30 GDDHGFSPLHWAAKEGHVAIVEMLLSRGARVNSTNMGDDTPLHLAAAHGHRDIVQKLLSRKADVNA--VNEHGNTPLHYA  107 (448)
T ss_pred             ccccCcchhhhhhhcccHHHHHHHHhcccccccccCCCCcchhhhhhcccHHHHHHHHHHhcccch--hhccCCCchhhh
Confidence            467788999999999999999999999999999998899999999999999999999999999888  778999999999


Q ss_pred             HHcCcHHHHHHHHHCCCCCCCCCCCCChHHHHHHhcCcHHHHHHHHHCCCCcc
Q psy904          256 ADKGHCRFVELLLSKGAQVEVKNKKGNSPLWLAANGGHLSVVELLCKHGADID  308 (596)
Q Consensus       256 ~~~~~~~iv~~Ll~~g~di~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~  308 (596)
                      |..|...+.+-|+..|+-+++.|+.|.|||..|--.-...+.++.-++|-.++
T Consensus       108 cfwgydqiaedli~~ga~v~icnk~g~tpldkakp~l~~~l~e~aek~gq~~n  160 (448)
T KOG0195|consen  108 CFWGYDQIAEDLISCGAAVNICNKKGMTPLDKAKPMLKNTLLEIAEKHGQSPN  160 (448)
T ss_pred             hhhcHHHHHHHHHhccceeeecccCCCCchhhhchHHHHHHHHHHHHhCCCCC
Confidence            99999999999999999999999999999988743222222333334566554


No 74 
>cd00204 ANK ankyrin repeats;  ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.65  E-value=2.7e-15  Score=130.09  Aligned_cols=123  Identities=45%  Similarity=0.717  Sum_probs=107.0

Q ss_pred             CCCCCcHHHHHHhcCcHHHHHHHHHCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccccCCCChHHHHHHH
Q psy904            8 ESNHDTALTLACAGGHEELVELLLSRGADIEHRDKKGFTPLILAATAGHDKVVDILLNHKADMEAQSERTKDTPLSLACS   87 (596)
Q Consensus         8 d~~g~t~L~~A~~~g~~~ivk~Ll~~g~~i~~~d~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~~   87 (596)
                      +.+|.||||.|+..|+.+++++|+..|.+.+..+..|.||||+|+..++.+++++|+..++.+... +..+.||+|+|+.
T Consensus         4 ~~~g~t~l~~a~~~~~~~~i~~li~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~-~~~~~~~l~~a~~   82 (126)
T cd00204           4 DEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNAR-DKDGNTPLHLAAR   82 (126)
T ss_pred             CcCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccc-CCCCCCHHHHHHH
Confidence            467889999999999999999999999888888889999999999999999999999998766544 4677899999999


Q ss_pred             CCcHHHHHHHHhCCCCccCCCCCCCcHHHHHHhcCCHHHHHHHH
Q psy904           88 GGRYEVVELLLTRGANKEHRNVSDYTPLSLAASGGYVNIIKLLL  131 (596)
Q Consensus        88 ~g~~eivk~LL~~g~~~~~~d~~g~t~L~~A~~~g~~eiv~~Ll  131 (596)
                      .++.+++++|+..+.+++..+..+.||+++|+..++.+++++|+
T Consensus        83 ~~~~~~~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll  126 (126)
T cd00204          83 NGNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNGHLEVVKLLL  126 (126)
T ss_pred             cCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCHHHHHHhC
Confidence            99999999999988888888888889999998888888888774


No 75 
>KOG4214|consensus
Probab=99.58  E-value=7.4e-15  Score=113.07  Aligned_cols=104  Identities=29%  Similarity=0.374  Sum_probs=93.8

Q ss_pred             hHHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCChHHHHHHhcCcH
Q psy904          215 TPLMEAASGGYVEVGRVLLDKGADVNAPPVPSSRDTALTIAADKGHCRFVELLLSKGAQVEVKNKKGNSPLWLAANGGHL  294 (596)
Q Consensus       215 t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~g~di~~~d~~g~TpL~~A~~~g~~  294 (596)
                      -.+.+++.+|.++-|+..+..|.++|-.   ..|.+|||+|+.+|.+.+++||+..|++++.+|+.|-|||..|+..||.
T Consensus         4 ~~~~W~vkNG~~DeVk~~v~~g~nVn~~---~ggR~plhyAAD~GQl~ilefli~iGA~i~~kDKygITPLLsAvwEGH~   80 (117)
T KOG4214|consen    4 MSVAWNVKNGEIDEVKQSVNEGLNVNEI---YGGRTPLHYAADYGQLSILEFLISIGANIQDKDKYGITPLLSAVWEGHR   80 (117)
T ss_pred             hhHhhhhccCcHHHHHHHHHccccHHHH---hCCcccchHhhhcchHHHHHHHHHhccccCCccccCCcHHHHHHHHhhH
Confidence            3478899999999999999999777643   3789999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHCCCCcccCCCCCCCHHHHH
Q psy904          295 SVVELLCKHGADIDSQDNRKVSCLMAA  321 (596)
Q Consensus       295 ~iv~~Ll~~gad~~~~~~~g~t~L~~A  321 (596)
                      ++|++|+++|+|-.....+|.+.+..+
T Consensus        81 ~cVklLL~~GAdrt~~~PdG~~~~eat  107 (117)
T KOG4214|consen   81 DCVKLLLQNGADRTIHAPDGTALIEAT  107 (117)
T ss_pred             HHHHHHHHcCcccceeCCCchhHHhhc
Confidence            999999999999998888887766544


No 76 
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.51  E-value=7.2e-13  Score=127.72  Aligned_cols=128  Identities=37%  Similarity=0.527  Sum_probs=106.6

Q ss_pred             cccCCCChHHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHcCc-----HHHHHHHHHCCC---CCCCCCC
Q psy904          208 HRAKTGLTPLMEAASGGYVEVGRVLLDKGADVNAPPVPSSRDTALTIAADKGH-----CRFVELLLSKGA---QVEVKNK  279 (596)
Q Consensus       208 ~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~-----~~iv~~Ll~~g~---di~~~d~  279 (596)
                      ..+..+.++++.++..+...++.+|+..|++++.  .+..|.||||+|+..++     .+++++|+..|+   +++..|.
T Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~  145 (235)
T COG0666          68 ARDLDGRLPLHSAASKGDDKIVKLLLASGADVNA--KDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDE  145 (235)
T ss_pred             cCCccccCHHHHHHHcCcHHHHHHHHHcCCCccc--ccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccCC
Confidence            3445577888888888888888888888888765  56778888888888888     888888888888   5556688


Q ss_pred             CCChHHHHHHhcCcHHHHHHHHHCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHhCc
Q psy904          280 KGNSPLWLAANGGHLSVVELLCKHGADIDSQDNRKVSCLMAAFRKGHVKAVRWMVNHV  337 (596)
Q Consensus       280 ~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~  337 (596)
                      .|.||||+|+..|+.+++.+|+..|++++.++..|.|+++.|...++..++.+|+..+
T Consensus       146 ~g~tpl~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~l~~~~  203 (235)
T COG0666         146 DGNTPLHWAALNGDADIVELLLEAGADPNSRNSYGVTALDPAAKNGRIELVKLLLDKG  203 (235)
T ss_pred             CCCchhHHHHHcCchHHHHHHHhcCCCCcccccCCCcchhhhcccchHHHHHHHHhcC
Confidence            8889999998888888888888888888888888889999998888888888888876


No 77 
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.50  E-value=9.7e-13  Score=126.81  Aligned_cols=127  Identities=37%  Similarity=0.497  Sum_probs=116.4

Q ss_pred             ccCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccCCCChHHHHHHhcCc-----HHHHHHHHhCCC--CCCCCCCCCCCC
Q psy904          177 ETNRNTALTLACFQGRHEVVSLLLDRKANVEHRAKTGLTPLMEAASGGY-----VEVGRVLLDKGA--DVNAPPVPSSRD  249 (596)
Q Consensus       177 ~~~~~t~L~~A~~~~~~~ii~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~-----~~iv~~Ll~~g~--~~~~~~~~~~g~  249 (596)
                      +..+.++++.++..+...++.+++..|.+++..+..|.||||+|+..++     .+++++|+..|+  +++. ..+..|.
T Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~-~~~~~g~  148 (235)
T COG0666          70 DLDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNN-LRDEDGN  148 (235)
T ss_pred             CccccCHHHHHHHcCcHHHHHHHHHcCCCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCcc-ccCCCCC
Confidence            4456799999999999999999999999999999999999999999999     999999999999  3333 2578999


Q ss_pred             cHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCChHHHHHHhcCcHHHHHHHHHCC
Q psy904          250 TALTIAADKGHCRFVELLLSKGAQVEVKNKKGNSPLWLAANGGHLSVVELLCKHG  304 (596)
Q Consensus       250 t~L~~A~~~~~~~iv~~Ll~~g~di~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~g  304 (596)
                      ||||+|+..|+.+++.+|++.|++++..+..|.|+|+.|+..++..++.+|+..+
T Consensus       149 tpl~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~l~~~~  203 (235)
T COG0666         149 TPLHWAALNGDADIVELLLEAGADPNSRNSYGVTALDPAAKNGRIELVKLLLDKG  203 (235)
T ss_pred             chhHHHHHcCchHHHHHHHhcCCCCcccccCCCcchhhhcccchHHHHHHHHhcC
Confidence            9999999999999999999999999999999999999999999999999999976


No 78 
>KOG4214|consensus
Probab=99.46  E-value=2.3e-13  Score=104.95  Aligned_cols=102  Identities=23%  Similarity=0.336  Sum_probs=75.5

Q ss_pred             cHHHHHHhcCcHHHHHHHHHCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccccCCCChHHHHHHHCCcHH
Q psy904           13 TALTLACAGGHEELVELLLSRGADIEHRDKKGFTPLILAATAGHDKVVDILLNHKADMEAQSERTKDTPLSLACSGGRYE   92 (596)
Q Consensus        13 t~L~~A~~~g~~~ivk~Ll~~g~~i~~~d~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~~~g~~e   92 (596)
                      --+.|++++|.++-|+..+..|.++|..- .|.+|||||+.+|+..++.||+..|++++.. +..|.|||..|++.||.+
T Consensus         4 ~~~~W~vkNG~~DeVk~~v~~g~nVn~~~-ggR~plhyAAD~GQl~ilefli~iGA~i~~k-DKygITPLLsAvwEGH~~   81 (117)
T KOG4214|consen    4 MSVAWNVKNGEIDEVKQSVNEGLNVNEIY-GGRTPLHYAADYGQLSILEFLISIGANIQDK-DKYGITPLLSAVWEGHRD   81 (117)
T ss_pred             hhHhhhhccCcHHHHHHHHHccccHHHHh-CCcccchHhhhcchHHHHHHHHHhccccCCc-cccCCcHHHHHHHHhhHH
Confidence            34667788888888888777777777653 6777888888888888888888877777654 567777887777778888


Q ss_pred             HHHHHHhCCCCccCCCCCCCcHHH
Q psy904           93 VVELLLTRGANKEHRNVSDYTPLS  116 (596)
Q Consensus        93 ivk~LL~~g~~~~~~d~~g~t~L~  116 (596)
                      +|++||+.|++-.....+|.+.+.
T Consensus        82 cVklLL~~GAdrt~~~PdG~~~~e  105 (117)
T KOG4214|consen   82 CVKLLLQNGADRTIHAPDGTALIE  105 (117)
T ss_pred             HHHHHHHcCcccceeCCCchhHHh
Confidence            888887777776666666655544


No 79 
>KOG1710|consensus
Probab=99.39  E-value=2.2e-12  Score=120.23  Aligned_cols=121  Identities=33%  Similarity=0.341  Sum_probs=80.9

Q ss_pred             ChHHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCC-CCCCChHHHHHHhcC
Q psy904          214 LTPLMEAASGGYVEVGRVLLDKGADVNAPPVPSSRDTALTIAADKGHCRFVELLLSKGAQVEVK-NKKGNSPLWLAANGG  292 (596)
Q Consensus       214 ~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~g~di~~~-d~~g~TpL~~A~~~g  292 (596)
                      ..||..++-.|..+.+..||+.--.+|.  .|.+|.|+|..|+..|+.+++++||++|+|+|.. +..+.||||+|+.+|
T Consensus        13 ~~~Lle~i~Kndt~~a~~LLs~vr~vn~--~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAALSG   90 (396)
T KOG1710|consen   13 KSPLLEAIDKNDTEAALALLSTVRQVNQ--RDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAALSG   90 (396)
T ss_pred             hhHHHHHHccCcHHHHHHHHHHhhhhhc--cCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHHcC
Confidence            3566666666666666666655333444  5566777777777777777777777777776643 445677777777777


Q ss_pred             cHHHHHHHHHCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHhC
Q psy904          293 HLSVVELLCKHGADIDSQDNRKVSCLMAAFRKGHVKAVRWMVNH  336 (596)
Q Consensus       293 ~~~iv~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~  336 (596)
                      +.++..+|++.|+.+...|.-|.|+-..|+.-|+.++|..+-++
T Consensus        91 n~dvcrllldaGa~~~~vNsvgrTAaqmAAFVG~H~CV~iINN~  134 (396)
T KOG1710|consen   91 NQDVCRLLLDAGARMYLVNSVGRTAAQMAAFVGHHECVAIINNH  134 (396)
T ss_pred             CchHHHHHHhccCccccccchhhhHHHHHHHhcchHHHHHHhcc
Confidence            77777777777777777777777777777777777776665544


No 80 
>PF13857 Ank_5:  Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.38  E-value=3.7e-13  Score=98.53  Aligned_cols=55  Identities=44%  Similarity=0.594  Sum_probs=30.2

Q ss_pred             HHHCC-CCCCCCCCCCChHHHHHHhcCcHHHHHHHHHCCCCcccCCCCCCCHHHHH
Q psy904          267 LLSKG-AQVEVKNKKGNSPLWLAANGGHLSVVELLCKHGADIDSQDNRKVSCLMAA  321 (596)
Q Consensus       267 Ll~~g-~di~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~~~~g~t~L~~A  321 (596)
                      ||++| ++++..|..|.||||+|+..|+.++|++|+..|++++.+|..|.|||++|
T Consensus         1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A   56 (56)
T PF13857_consen    1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQTPLHYA   56 (56)
T ss_dssp             -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred             CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence            56777 88888888888888888888888888888888888888888888888886


No 81 
>PF13637 Ank_4:  Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.37  E-value=1.3e-12  Score=95.11  Aligned_cols=54  Identities=44%  Similarity=0.628  Sum_probs=45.6

Q ss_pred             CCcHHHHHHhcCcHHHHHHHHHCCCCccccCCCCCcHHHHHHHcCCHHHHHHHH
Q psy904           11 HDTALTLACAGGHEELVELLLSRGADIEHRDKKGFTPLILAATAGHDKVVDILL   64 (596)
Q Consensus        11 g~t~L~~A~~~g~~~ivk~Ll~~g~~i~~~d~~g~t~L~~A~~~g~~eiv~~Ll   64 (596)
                      |.|+||+||..|+++++++|++.|++++..|..|.||||+|+..|+.+++++||
T Consensus         1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll   54 (54)
T PF13637_consen    1 GRTPLHWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKNGNIDIVKFLL   54 (54)
T ss_dssp             SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred             CChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence            689999999999999999999999999999999999999999999999999986


No 82 
>KOG0515|consensus
Probab=99.36  E-value=2.4e-12  Score=128.91  Aligned_cols=119  Identities=21%  Similarity=0.278  Sum_probs=94.1

Q ss_pred             hHHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCChHHHHHHhcCcH
Q psy904          215 TPLMEAASGGYVEVGRVLLDKGADVNAPPVPSSRDTALTIAADKGHCRFVELLLSKGAQVEVKNKKGNSPLWLAANGGHL  294 (596)
Q Consensus       215 t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~g~di~~~d~~g~TpL~~A~~~g~~  294 (596)
                      ..|..|+..|-+++|+..+..-.|+..  .+..|.|+||-|+..|+++||+||++.|+++|..|.+||||||+|+..+++
T Consensus       552 aLLLDaaLeGEldlVq~~i~ev~DpSq--pNdEGITaLHNAiCaghyeIVkFLi~~ganVNa~DSdGWTPLHCAASCNnv  629 (752)
T KOG0515|consen  552 ALLLDAALEGELDLVQRIIYEVTDPSQ--PNDEGITALHNAICAGHYEIVKFLIEFGANVNAADSDGWTPLHCAASCNNV  629 (752)
T ss_pred             HHHHhhhhcchHHHHHHHHHhhcCCCC--CCccchhHHhhhhhcchhHHHHHHHhcCCcccCccCCCCchhhhhhhcCch
Confidence            345567788888988888876666554  446788999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHCCCCcccCC-CCCCCHHHHHH--HcCCHHHHHHHHh
Q psy904          295 SVVELLCKHGADIDSQD-NRKVSCLMAAF--RKGHVKAVRWMVN  335 (596)
Q Consensus       295 ~iv~~Ll~~gad~~~~~-~~g~t~L~~A~--~~g~~~iv~~Ll~  335 (596)
                      -|++.|++.|+-|-+.. .++.|+..-+-  ..|...+.+||..
T Consensus       630 ~~ckqLVe~GaavfAsTlSDmeTa~eKCee~eeGY~~CsqyL~~  673 (752)
T KOG0515|consen  630 PMCKQLVESGAAVFASTLSDMETAAEKCEEMEEGYDQCSQYLYG  673 (752)
T ss_pred             HHHHHHHhccceEEeeecccccchhhhcchhhhhHHHHHHHHHH
Confidence            99999999887765544 56778776653  4477778888764


No 83 
>PF13637 Ank_4:  Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.35  E-value=2e-12  Score=94.17  Aligned_cols=53  Identities=40%  Similarity=0.685  Sum_probs=24.0

Q ss_pred             CChHHHHHHhcCcHHHHHHHHHCCCCcccCCCCCCCHHHHHHHcCCHHHHHHH
Q psy904          281 GNSPLWLAANGGHLSVVELLCKHGADIDSQDNRKVSCLMAAFRKGHVKAVRWM  333 (596)
Q Consensus       281 g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~~iv~~L  333 (596)
                      |.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+++++++|
T Consensus         1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~~~~~~~L   53 (54)
T PF13637_consen    1 GRTPLHWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKNGNIDIVKFL   53 (54)
T ss_dssp             SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-HHHHHHH
T ss_pred             CChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHccCHHHHHHH
Confidence            34455555555555555555555555555555555555555555555555544


No 84 
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.34  E-value=5.2e-12  Score=140.25  Aligned_cols=105  Identities=33%  Similarity=0.452  Sum_probs=82.8

Q ss_pred             hHHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCChHHHHHHhcCcH
Q psy904          215 TPLMEAASGGYVEVGRVLLDKGADVNAPPVPSSRDTALTIAADKGHCRFVELLLSKGAQVEVKNKKGNSPLWLAANGGHL  294 (596)
Q Consensus       215 t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~g~di~~~d~~g~TpL~~A~~~g~~  294 (596)
                      +.|+.|+..|+.+++++|+..|+++|.  .+..|.||||+|+..|+.+++++|+++|++++..|..|.||||+|+..|+.
T Consensus        84 ~~L~~aa~~G~~~~vk~LL~~Gadin~--~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~  161 (664)
T PTZ00322         84 VELCQLAASGDAVGARILLTGGADPNC--RDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFR  161 (664)
T ss_pred             HHHHHHHHcCCHHHHHHHHHCCCCCCC--cCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcH
Confidence            347777888888888888888887776  456778888888888888888888888888888888888888888888888


Q ss_pred             HHHHHHHHC-------CCCcccCCCCCCCHHHHH
Q psy904          295 SVVELLCKH-------GADIDSQDNRKVSCLMAA  321 (596)
Q Consensus       295 ~iv~~Ll~~-------gad~~~~~~~g~t~L~~A  321 (596)
                      +++++|+.+       |++++..+..|.+|+..+
T Consensus       162 ~iv~~Ll~~~~~~~~~ga~~~~~~~~g~~~~~~~  195 (664)
T PTZ00322        162 EVVQLLSRHSQCHFELGANAKPDSFTGKPPSLED  195 (664)
T ss_pred             HHHHHHHhCCCcccccCCCCCccccCCCCccchh
Confidence            888888877       777777777777665543


No 85 
>KOG1710|consensus
Probab=99.34  E-value=6.4e-12  Score=117.11  Aligned_cols=124  Identities=29%  Similarity=0.321  Sum_probs=116.2

Q ss_pred             CCCcHHHHHHhcCcHHHHHHHHHCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccccCCCChHHHHHHHCC
Q psy904           10 NHDTALTLACAGGHEELVELLLSRGADIEHRDKKGFTPLILAATAGHDKVVDILLNHKADMEAQSERTKDTPLSLACSGG   89 (596)
Q Consensus        10 ~g~t~L~~A~~~g~~~ivk~Ll~~g~~i~~~d~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~~~g   89 (596)
                      ...++|..++-.|+.+-+..||+.--++|.+|..|+|+|..|+..|+.++|++|++.|++++......+.||||+|+.+|
T Consensus        11 ~~~~~Lle~i~Kndt~~a~~LLs~vr~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAALSG   90 (396)
T KOG1710|consen   11 APKSPLLEAIDKNDTEAALALLSTVRQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAALSG   90 (396)
T ss_pred             chhhHHHHHHccCcHHHHHHHHHHhhhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHHcC
Confidence            34589999999999999999999877799999999999999999999999999999999999998889999999999999


Q ss_pred             cHHHHHHHHhCCCCccCCCCCCCcHHHHHHhcCCHHHHHHHHhC
Q psy904           90 RYEVVELLLTRGANKEHRNVSDYTPLSLAASGGYVNIIKLLLTH  133 (596)
Q Consensus        90 ~~eivk~LL~~g~~~~~~d~~g~t~L~~A~~~g~~eiv~~Ll~~  133 (596)
                      +.++..+||+.|+.+...+.-|.|+-..|+.-|+.++|..+-.+
T Consensus        91 n~dvcrllldaGa~~~~vNsvgrTAaqmAAFVG~H~CV~iINN~  134 (396)
T KOG1710|consen   91 NQDVCRLLLDAGARMYLVNSVGRTAAQMAAFVGHHECVAIINNH  134 (396)
T ss_pred             CchHHHHHHhccCccccccchhhhHHHHHHHhcchHHHHHHhcc
Confidence            99999999999999999999999999999999999998876543


No 86 
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.29  E-value=1.2e-11  Score=137.33  Aligned_cols=87  Identities=29%  Similarity=0.407  Sum_probs=84.9

Q ss_pred             cHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCChHHHHHHhcCcHHHHHHHHHCCCCcccCCCCCCCHHHHHHHcCCHHH
Q psy904          250 TALTIAADKGHCRFVELLLSKGAQVEVKNKKGNSPLWLAANGGHLSVVELLCKHGADIDSQDNRKVSCLMAAFRKGHVKA  329 (596)
Q Consensus       250 t~L~~A~~~~~~~iv~~Ll~~g~di~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~~i  329 (596)
                      +.|+.|+..|+.+++++|+++|+++|..|..|.||||+|+..|+.+++++|+++|++++..|..|.||||+|+..|+.++
T Consensus        84 ~~L~~aa~~G~~~~vk~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~i  163 (664)
T PTZ00322         84 VELCQLAASGDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREV  163 (664)
T ss_pred             HHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHH
Confidence            45889999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhC
Q psy904          330 VRWMVNH  336 (596)
Q Consensus       330 v~~Ll~~  336 (596)
                      +++|+.+
T Consensus       164 v~~Ll~~  170 (664)
T PTZ00322        164 VQLLSRH  170 (664)
T ss_pred             HHHHHhC
Confidence            9999999


No 87 
>KOG0515|consensus
Probab=99.28  E-value=1.3e-11  Score=123.74  Aligned_cols=93  Identities=23%  Similarity=0.261  Sum_probs=87.2

Q ss_pred             HHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCChHHHHHHhcCcHHHHHHHHHCCCCcccCCCCCCCHHHHHHHcCCHHHH
Q psy904          251 ALTIAADKGHCRFVELLLSKGAQVEVKNKKGNSPLWLAANGGHLSVVELLCKHGADIDSQDNRKVSCLMAAFRKGHVKAV  330 (596)
Q Consensus       251 ~L~~A~~~~~~~iv~~Ll~~g~di~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~~iv  330 (596)
                      .|.-|+..|.+++|+-.+..--|+...|..|-|+||-|+..||.+||+|||++|+++|..|.+|+||||+|+..++..|+
T Consensus       553 LLLDaaLeGEldlVq~~i~ev~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa~DSdGWTPLHCAASCNnv~~c  632 (752)
T KOG0515|consen  553 LLLDAALEGELDLVQRIIYEVTDPSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNAADSDGWTPLHCAASCNNVPMC  632 (752)
T ss_pred             HHHhhhhcchHHHHHHHHHhhcCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccCccCCCCchhhhhhhcCchHHH
Confidence            45567888999999999998899999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhCcCCCCCc
Q psy904          331 RWMVNHVAQFPSD  343 (596)
Q Consensus       331 ~~Ll~~~~~~~~~  343 (596)
                      +.|+++|+-+...
T Consensus       633 kqLVe~GaavfAs  645 (752)
T KOG0515|consen  633 KQLVESGAAVFAS  645 (752)
T ss_pred             HHHHhccceEEee
Confidence            9999999976654


No 88 
>PF13857 Ank_5:  Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.24  E-value=7.6e-12  Score=91.57  Aligned_cols=55  Identities=47%  Similarity=0.662  Sum_probs=31.7

Q ss_pred             HHhCC-CCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCChHHHHH
Q psy904          232 LLDKG-ADVNAPPVPSSRDTALTIAADKGHCRFVELLLSKGAQVEVKNKKGNSPLWLA  288 (596)
Q Consensus       232 Ll~~g-~~~~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~g~di~~~d~~g~TpL~~A  288 (596)
                      ||+.| .+++.  .+..|.||||+||..|+.+++++|+..|+|++.+|..|+||||+|
T Consensus         1 LL~~~~~~~n~--~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A   56 (56)
T PF13857_consen    1 LLEHGPADVNA--QDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQTPLHYA   56 (56)
T ss_dssp             -----T--TT-----TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred             CCccCcCCCcC--cCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence            56677 55554  778999999999999999999999999999999999999999987


No 89 
>KOG0818|consensus
Probab=98.77  E-value=3.7e-08  Score=98.66  Aligned_cols=86  Identities=31%  Similarity=0.389  Sum_probs=62.7

Q ss_pred             HHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCChHHHHHHhcCcHHH
Q psy904          217 LMEAASGGYVEVGRVLLDKGADVNAPPVPSSRDTALTIAADKGHCRFVELLLSKGAQVEVKNKKGNSPLWLAANGGHLSV  296 (596)
Q Consensus       217 L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~g~di~~~d~~g~TpL~~A~~~g~~~i  296 (596)
                      ||..++.|+++..-.||..|+++|+. -+..|.||||+|+..|+.--+++|+-+|+|++..|.+|.||+.+|-..||-++
T Consensus       137 LhasvRt~nlet~LRll~lGA~~N~~-hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d~~GmtP~~~AR~~gH~~l  215 (669)
T KOG0818|consen  137 LHSSVRTGNLETCLRLLSLGAQANFF-HPEKGNTPLHVAAKAGQILQAELLAVYGADPGAQDSSGMTPVDYARQGGHHEL  215 (669)
T ss_pred             HHHHhhcccHHHHHHHHHcccccCCC-CcccCCchhHHHHhccchhhhhHHhhccCCCCCCCCCCCcHHHHHHhcCchHH
Confidence            77777777777777777777777765 34567777777777777777777777777777777777777777777777777


Q ss_pred             HHHHHHC
Q psy904          297 VELLCKH  303 (596)
Q Consensus       297 v~~Ll~~  303 (596)
                      .+-|++.
T Consensus       216 aeRl~e~  222 (669)
T KOG0818|consen  216 AERLVEI  222 (669)
T ss_pred             HHHHHHH
Confidence            7766653


No 90 
>KOG0783|consensus
Probab=98.71  E-value=1e-08  Score=108.39  Aligned_cols=84  Identities=35%  Similarity=0.355  Sum_probs=46.7

Q ss_pred             cccccCCCChHHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCChHH
Q psy904          206 VEHRAKTGLTPLMEAASGGYVEVGRVLLDKGADVNAPPVPSSRDTALTIAADKGHCRFVELLLSKGAQVEVKNKKGNSPL  285 (596)
Q Consensus       206 ~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~g~di~~~d~~g~TpL  285 (596)
                      .+..|..|.++||+++..+...+++||+++|++++..+ ...|.||||-|+.+|+++++-.||.+|+.+.+.|+.|.+||
T Consensus        45 anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD-~ESG~taLHRaiyyG~idca~lLL~~g~SL~i~Dkeglspl  123 (1267)
T KOG0783|consen   45 ANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQD-EESGYTALHRAIYYGNIDCASLLLSKGRSLRIKDKEGLSPL  123 (1267)
T ss_pred             hhHHHhhccceeeeeeccchhHHHHHHHhcCceeeecc-ccccchHhhHhhhhchHHHHHHHHhcCCceEEecccCCCHH
Confidence            34455555555555555555555555555555555442 23455555555555555555555555555555555555555


Q ss_pred             HHHHh
Q psy904          286 WLAAN  290 (596)
Q Consensus       286 ~~A~~  290 (596)
                      .+.++
T Consensus       124 q~~~r  128 (1267)
T KOG0783|consen  124 QFLSR  128 (1267)
T ss_pred             HHHhh
Confidence            54443


No 91 
>PF13606 Ank_3:  Ankyrin repeat
Probab=98.68  E-value=2.3e-08  Score=62.33  Aligned_cols=29  Identities=48%  Similarity=0.928  Sum_probs=20.3

Q ss_pred             CCChHHHHHHhcCcHHHHHHHHHCCCCcc
Q psy904          280 KGNSPLWLAANGGHLSVVELLCKHGADID  308 (596)
Q Consensus       280 ~g~TpL~~A~~~g~~~iv~~Ll~~gad~~  308 (596)
                      +|+||||+|+..|+.++|++|+++|+|+|
T Consensus         1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn   29 (30)
T PF13606_consen    1 NGNTPLHLAASNGNIEIVKYLLEHGADVN   29 (30)
T ss_pred             CCCCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence            36677777777777777777777777665


No 92 
>KOG0818|consensus
Probab=98.65  E-value=1e-07  Score=95.59  Aligned_cols=84  Identities=33%  Similarity=0.412  Sum_probs=53.6

Q ss_pred             HHHHHHcCcHHHHHHHHHCCCCCCCCC-CCCChHHHHHHhcCcHHHHHHHHHCCCCcccCCCCCCCHHHHHHHcCCHHHH
Q psy904          252 LTIAADKGHCRFVELLLSKGAQVEVKN-KKGNSPLWLAANGGHLSVVELLCKHGADIDSQDNRKVSCLMAAFRKGHVKAV  330 (596)
Q Consensus       252 L~~A~~~~~~~iv~~Ll~~g~di~~~d-~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~~iv  330 (596)
                      ||..++.|+.++.=-||..|+++|..+ ..|.||||+|+..|+..-+++|+-+|||+...|..|+||+.+|-..||..+.
T Consensus       137 LhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d~~GmtP~~~AR~~gH~~la  216 (669)
T KOG0818|consen  137 LHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGAQDSSGMTPVDYARQGGHHELA  216 (669)
T ss_pred             HHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCCCCCCCCcHHHHHHhcCchHHH
Confidence            566666666666666666666666554 3466666666666666666666666666666666666666666666666655


Q ss_pred             HHHHh
Q psy904          331 RWMVN  335 (596)
Q Consensus       331 ~~Ll~  335 (596)
                      +-|++
T Consensus       217 eRl~e  221 (669)
T KOG0818|consen  217 ERLVE  221 (669)
T ss_pred             HHHHH
Confidence            55544


No 93 
>KOG0782|consensus
Probab=98.63  E-value=7.1e-08  Score=97.93  Aligned_cols=118  Identities=18%  Similarity=0.240  Sum_probs=89.1

Q ss_pred             HHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCC--CCCCCCCCChHHHHHHhcCcH
Q psy904          217 LMEAASGGYVEVGRVLLDKGADVNAPPVPSSRDTALTIAADKGHCRFVELLLSKGAQ--VEVKNKKGNSPLWLAANGGHL  294 (596)
Q Consensus       217 L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~g~d--i~~~d~~g~TpL~~A~~~g~~  294 (596)
                      |..|+..+.+--++-+..+|.++-+  ......+.||+|+..|+-+||+|||++|..  ++..|..|.|+||.|+..++-
T Consensus       870 il~av~~~D~~klqE~h~~gg~ll~--~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~r  947 (1004)
T KOG0782|consen  870 ILRAVLSSDLMKLQETHLNGGSLLI--QGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRNR  947 (1004)
T ss_pred             HHHHHHhccHHHHHHHHhcCCceEe--eCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcch
Confidence            3445555555444555555555554  345566888888888888888888888743  456678888888888888888


Q ss_pred             HHHHHHHHCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHhC
Q psy904          295 SVVELLCKHGADIDSQDNRKVSCLMAAFRKGHVKAVRWMVNH  336 (596)
Q Consensus       295 ~iv~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~  336 (596)
                      .+..+|++.|+.+..+|..|.||-.-|-..|..++..||-+.
T Consensus       948 ~vc~~lvdagasl~ktd~kg~tp~eraqqa~d~dlaayle~r  989 (1004)
T KOG0782|consen  948 AVCQLLVDAGASLRKTDSKGKTPQERAQQAGDPDLAAYLESR  989 (1004)
T ss_pred             HHHHHHHhcchhheecccCCCChHHHHHhcCCchHHHHHhhh
Confidence            888888888888888888888888888888888888887654


No 94 
>PF13606 Ank_3:  Ankyrin repeat
Probab=98.62  E-value=4.2e-08  Score=61.15  Aligned_cols=29  Identities=45%  Similarity=0.714  Sum_probs=23.4

Q ss_pred             CCCcHHHHHHhcCcHHHHHHHHHCCCCcc
Q psy904           10 NHDTALTLACAGGHEELVELLLSRGADIE   38 (596)
Q Consensus        10 ~g~t~L~~A~~~g~~~ivk~Ll~~g~~i~   38 (596)
                      +|+||||+||..|++++|++||++|+|+|
T Consensus         1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn   29 (30)
T PF13606_consen    1 NGNTPLHLAASNGNIEIVKYLLEHGADVN   29 (30)
T ss_pred             CCCCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence            57788888888888888888888888776


No 95 
>PF00023 Ank:  Ankyrin repeat Hereditary spherocytosis;  InterPro: IPR002110  The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it.  The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.59  E-value=7.1e-08  Score=61.97  Aligned_cols=32  Identities=56%  Similarity=0.928  Sum_probs=23.3

Q ss_pred             CCChHHHHHHhcCcHHHHHHHHHCCCCcccCC
Q psy904          280 KGNSPLWLAANGGHLSVVELLCKHGADIDSQD  311 (596)
Q Consensus       280 ~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~~  311 (596)
                      +|.||||+|+..|+.+++++|+++|++++.+|
T Consensus         1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d   32 (33)
T PF00023_consen    1 DGNTPLHYAAQRGHPDIVKLLLKHGADINARD   32 (33)
T ss_dssp             TSBBHHHHHHHTTCHHHHHHHHHTTSCTTCBC
T ss_pred             CcccHHHHHHHHHHHHHHHHHHHCcCCCCCCC
Confidence            36777777777777777777777777777665


No 96 
>KOG0783|consensus
Probab=98.56  E-value=3.8e-08  Score=104.28  Aligned_cols=84  Identities=25%  Similarity=0.361  Sum_probs=76.6

Q ss_pred             ccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccccCCCChHHHHHHHCCcHHHHHHHHhCCCCccCCCCCCCcHHH
Q psy904           37 IEHRDKKGFTPLILAATAGHDKVVDILLNHKADMEAQSERTKDTPLSLACSGGRYEVVELLLTRGANKEHRNVSDYTPLS  116 (596)
Q Consensus        37 i~~~d~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~~~g~~eivk~LL~~g~~~~~~d~~g~t~L~  116 (596)
                      .|..|..|.|+||+|+..|...+++|||++|.++..++...|+||||-|+..|+++++-+||.+|......|..|..||.
T Consensus        45 anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~ESG~taLHRaiyyG~idca~lLL~~g~SL~i~Dkeglsplq  124 (1267)
T KOG0783|consen   45 ANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQDEESGYTALHRAIYYGNIDCASLLLSKGRSLRIKDKEGLSPLQ  124 (1267)
T ss_pred             hhHHHhhccceeeeeeccchhHHHHHHHhcCceeeeccccccchHhhHhhhhchHHHHHHHHhcCCceEEecccCCCHHH
Confidence            67888999999999999999999999999999999988889999999999999999999999999999999999999998


Q ss_pred             HHHh
Q psy904          117 LAAS  120 (596)
Q Consensus       117 ~A~~  120 (596)
                      +.+.
T Consensus       125 ~~~r  128 (1267)
T KOG0783|consen  125 FLSR  128 (1267)
T ss_pred             HHhh
Confidence            8765


No 97 
>KOG0782|consensus
Probab=98.53  E-value=3.4e-07  Score=93.12  Aligned_cols=119  Identities=19%  Similarity=0.222  Sum_probs=101.1

Q ss_pred             HHHHHhcCcHHHHHHHHHCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCc-cccccCCCChHHHHHHHCCcHHH
Q psy904           15 LTLACAGGHEELVELLLSRGADIEHRDKKGFTPLILAATAGHDKVVDILLNHKADM-EAQSERTKDTPLSLACSGGRYEV   93 (596)
Q Consensus        15 L~~A~~~g~~~ivk~Ll~~g~~i~~~d~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~-~~~~~~~~~t~L~~A~~~g~~ei   93 (596)
                      |..|+..+++--++-+..+|-++-+++.+..|.||+|+.-|+-++|+|||++|+.- ....+..|.|+||.|+..++..+
T Consensus       870 il~av~~~D~~klqE~h~~gg~ll~~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~r~v  949 (1004)
T KOG0782|consen  870 ILRAVLSSDLMKLQETHLNGGSLLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRNRAV  949 (1004)
T ss_pred             HHHHHHhccHHHHHHHHhcCCceEeeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcchHH
Confidence            55677777776667777788888888999999999999999999999999998753 33445788999999999999999


Q ss_pred             HHHHHhCCCCccCCCCCCCcHHHHHHhcCCHHHHHHHHhC
Q psy904           94 VELLLTRGANKEHRNVSDYTPLSLAASGGYVNIIKLLLTH  133 (596)
Q Consensus        94 vk~LL~~g~~~~~~d~~g~t~L~~A~~~g~~eiv~~Ll~~  133 (596)
                      .++|++.|+.+...|..|.||-..|-..|..++..||-.+
T Consensus       950 c~~lvdagasl~ktd~kg~tp~eraqqa~d~dlaayle~r  989 (1004)
T KOG0782|consen  950 CQLLVDAGASLRKTDSKGKTPQERAQQAGDPDLAAYLESR  989 (1004)
T ss_pred             HHHHHhcchhheecccCCCChHHHHHhcCCchHHHHHhhh
Confidence            9999999999999999999999999999999998888764


No 98 
>KOG0705|consensus
Probab=98.48  E-value=4.2e-07  Score=92.95  Aligned_cols=88  Identities=23%  Similarity=0.300  Sum_probs=53.9

Q ss_pred             HHHHHHHcCcHHHHHHHHHCCCCC----CCCCCCCChHHHHHHhcCcHHHHHHHHHCCCCcccCCCCCCCHHHHHHHcCC
Q psy904          251 ALTIAADKGHCRFVELLLSKGAQV----EVKNKKGNSPLWLAANGGHLSVVELLCKHGADIDSQDNRKVSCLMAAFRKGH  326 (596)
Q Consensus       251 ~L~~A~~~~~~~iv~~Ll~~g~di----~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~~~~g~t~L~~A~~~g~  326 (596)
                      -|..|+...++..+-+||.||...    ..-+.+|.|+||+|+..|++.+.++|+=+|+|+-++|..|.|||.||-..|.
T Consensus       627 qLl~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~rda~g~t~l~yar~a~s  706 (749)
T KOG0705|consen  627 QLLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMARDAHGRTALFYARQAGS  706 (749)
T ss_pred             HHHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCccceecccCCchhhhhHhhccc
Confidence            344555555666666666665322    1234455666666666666666666666666666666666666666666666


Q ss_pred             HHHHHHHHhCcC
Q psy904          327 VKAVRWMVNHVA  338 (596)
Q Consensus       327 ~~iv~~Ll~~~~  338 (596)
                      -+++..|+.+|.
T Consensus       707 qec~d~llq~gc  718 (749)
T KOG0705|consen  707 QECIDVLLQYGC  718 (749)
T ss_pred             HHHHHHHHHcCC
Confidence            666666666665


No 99 
>KOG0506|consensus
Probab=98.48  E-value=1.5e-07  Score=94.05  Aligned_cols=94  Identities=30%  Similarity=0.290  Sum_probs=69.8

Q ss_pred             CCCCCcHHHHHHhcCcHHHHHHHHHCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccccCCCChHHHHHHH
Q psy904            8 ESNHDTALTLACAGGHEELVELLLSRGADIEHRDKKGFTPLILAATAGHDKVVDILLNHKADMEAQSERTKDTPLSLACS   87 (596)
Q Consensus         8 d~~g~t~L~~A~~~g~~~ivk~Ll~~g~~i~~~d~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~~   87 (596)
                      +.++...+++|++.|++..++.+.-.|.|++..|.+..|+||+|+.-|++++++||++.-.......+.+|.|||.-|..
T Consensus       503 ~~~~~i~~~~aa~~GD~~alrRf~l~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~~  582 (622)
T KOG0506|consen  503 ENDTVINVMYAAKNGDLSALRRFALQGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAKH  582 (622)
T ss_pred             cccchhhhhhhhhcCCHHHHHHHHHhcccccccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhHh
Confidence            34455667788888888888888778888888888888888888888888888888776544444556777788887777


Q ss_pred             CCcHHHHHHHHhCC
Q psy904           88 GGRYEVVELLLTRG  101 (596)
Q Consensus        88 ~g~~eivk~LL~~g  101 (596)
                      .+|.+++++|-+..
T Consensus       583 F~h~~v~k~L~~~~  596 (622)
T KOG0506|consen  583 FKHKEVVKLLEEAQ  596 (622)
T ss_pred             cCcHHHHHHHHHHh
Confidence            77777777776643


No 100
>PF00023 Ank:  Ankyrin repeat Hereditary spherocytosis;  InterPro: IPR002110  The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it.  The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.47  E-value=2.3e-07  Score=59.55  Aligned_cols=32  Identities=47%  Similarity=0.764  Sum_probs=26.8

Q ss_pred             CCCcHHHHHHhcCcHHHHHHHHHCCCCccccC
Q psy904           10 NHDTALTLACAGGHEELVELLLSRGADIEHRD   41 (596)
Q Consensus        10 ~g~t~L~~A~~~g~~~ivk~Ll~~g~~i~~~d   41 (596)
                      +|.||||+||..|+.++|++||+.|++++.+|
T Consensus         1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d   32 (33)
T PF00023_consen    1 DGNTPLHYAAQRGHPDIVKLLLKHGADINARD   32 (33)
T ss_dssp             TSBBHHHHHHHTTCHHHHHHHHHTTSCTTCBC
T ss_pred             CcccHHHHHHHHHHHHHHHHHHHCcCCCCCCC
Confidence            57888888888888888888888888888765


No 101
>KOG0506|consensus
Probab=98.45  E-value=2.2e-07  Score=92.90  Aligned_cols=92  Identities=23%  Similarity=0.259  Sum_probs=85.7

Q ss_pred             CCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCChHHHHHHhcCcHHHHHHHHHC-CCCcccCCCCCCCHHHHHHHcC
Q psy904          247 SRDTALTIAADKGHCRFVELLLSKGAQVEVKNKKGNSPLWLAANGGHLSVVELLCKH-GADIDSQDNRKVSCLMAAFRKG  325 (596)
Q Consensus       247 ~g~t~L~~A~~~~~~~iv~~Ll~~g~di~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~-gad~~~~~~~g~t~L~~A~~~g  325 (596)
                      .+...+.+|+..|++..++-+.=.|.|++..|-+.+|+||+|+..|++++++||+.. +.+++..|..|+|||+-|...+
T Consensus       505 ~~~i~~~~aa~~GD~~alrRf~l~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~~F~  584 (622)
T KOG0506|consen  505 DTVINVMYAAKNGDLSALRRFALQGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAKHFK  584 (622)
T ss_pred             cchhhhhhhhhcCCHHHHHHHHHhcccccccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhHhcC
Confidence            455788999999999999999999999999999999999999999999999999985 8999999999999999999999


Q ss_pred             CHHHHHHHHhCcC
Q psy904          326 HVKAVRWMVNHVA  338 (596)
Q Consensus       326 ~~~iv~~Ll~~~~  338 (596)
                      |.+++++|-+...
T Consensus       585 h~~v~k~L~~~~~  597 (622)
T KOG0506|consen  585 HKEVVKLLEEAQY  597 (622)
T ss_pred             cHHHHHHHHHHhc
Confidence            9999999987654


No 102
>KOG3609|consensus
Probab=98.44  E-value=6.6e-07  Score=96.38  Aligned_cols=130  Identities=22%  Similarity=0.236  Sum_probs=63.1

Q ss_pred             HHHHHHHcCCHHHHHHHHhcC----CCcccccCCCChHHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHc
Q psy904          183 ALTLACFQGRHEVVSLLLDRK----ANVEHRAKTGLTPLMEAASGGYVEVGRVLLDKGADVNAPPVPSSRDTALTIAADK  258 (596)
Q Consensus       183 ~L~~A~~~~~~~ii~~Ll~~g----~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~  258 (596)
                      ....|+..|+...++..++..    .++|..|.-|.++|+.|+.+.+.+++.+|++++..+         ..+|.+|+..
T Consensus        28 ~fL~a~E~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~---------gdALL~aI~~   98 (822)
T KOG3609|consen   28 GFLLAHENGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSEE---------GDALLLAIAV   98 (822)
T ss_pred             HHHHHHHcCChHHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCcccc---------chHHHHHHHH
Confidence            344555555555555555431    234444555555555555555555555555543211         2344455555


Q ss_pred             CcHHHHHHHHHCCCCCCCCCCCCChHHHHHHhcCcHHHHHHHHHCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHhCcC
Q psy904          259 GHCRFVELLLSKGAQVEVKNKKGNSPLWLAANGGHLSVVELLCKHGADIDSQDNRKVSCLMAAFRKGHVKAVRWMVNHVA  338 (596)
Q Consensus       259 ~~~~iv~~Ll~~g~di~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~  338 (596)
                      |..++|++++.+.......        +.               .+......-.-+.|||.+|+..++++|+++|+..|+
T Consensus        99 ~~v~~VE~ll~~~~~~~~~--------~~---------------~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~kg~  155 (822)
T KOG3609|consen   99 GSVPLVELLLVHFVDAPYL--------ER---------------SGDANSPHFTPDITPLMLAAHLNNFEILQCLLTRGH  155 (822)
T ss_pred             HHHHHHHHHHhcccccchh--------cc---------------ccccCcccCCCCccHHHHHHHhcchHHHHHHHHcCC
Confidence            5555555555442211000        00               000111222345567777777777777777777776


Q ss_pred             CCCCch
Q psy904          339 QFPSDQ  344 (596)
Q Consensus       339 ~~~~~~  344 (596)
                      .++.+.
T Consensus       156 ~i~~PH  161 (822)
T KOG3609|consen  156 CIPIPH  161 (822)
T ss_pred             CCCCCc
Confidence            666553


No 103
>KOG2384|consensus
Probab=98.43  E-value=4e-07  Score=80.56  Aligned_cols=92  Identities=20%  Similarity=0.240  Sum_probs=72.4

Q ss_pred             CCCCCCCCCCCChHHHHHHhcCcHHHHHHHHHCC-CCcccCCCCCCCHHHHHHHcCCHHHHHHHHhCcCCCCCchHHHHH
Q psy904          271 GAQVEVKNKKGNSPLWLAANGGHLSVVELLCKHG-ADIDSQDNRKVSCLMAAFRKGHVKAVRWMVNHVAQFPSDQEMTRY  349 (596)
Q Consensus       271 g~di~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~g-ad~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~  349 (596)
                      +.+||.+|..|+|||++|+..|+.+.+.||+.+| +.+..+|..|.+++.+|-+.|+.++|..|.++..+-..+.     
T Consensus         2 e~~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~~ets~p~-----   76 (223)
T KOG2384|consen    2 EGNINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFENDRETSHPM-----   76 (223)
T ss_pred             CCCccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHHhccCCCcc-----
Confidence            4688999999999999999999999999999999 8999999999999999999999999999998855433221     


Q ss_pred             HhhcCcHHHHHhhhhhhHHH
Q psy904          350 IQTVNDKELLDKCQECSMVI  369 (596)
Q Consensus       350 ~~~~~~~~~~~~~~~~~~~i  369 (596)
                        ...+...+..|..|...|
T Consensus        77 --nss~~e~lfyCE~Cd~~i   94 (223)
T KOG2384|consen   77 --NSSRDEALFYCEVCDIYI   94 (223)
T ss_pred             --cCCCCCccchhhhhhhhc
Confidence              122334445566664433


No 104
>KOG0705|consensus
Probab=98.42  E-value=6.6e-07  Score=91.57  Aligned_cols=92  Identities=24%  Similarity=0.385  Sum_probs=81.2

Q ss_pred             HHHHHhcCcHHHHHHHHhCCCCCC--CCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCChHHHHHHhcCcH
Q psy904          217 LMEAASGGYVEVGRVLLDKGADVN--APPVPSSRDTALTIAADKGHCRFVELLLSKGAQVEVKNKKGNSPLWLAANGGHL  294 (596)
Q Consensus       217 L~~A~~~g~~~iv~~Ll~~g~~~~--~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~g~di~~~d~~g~TpL~~A~~~g~~  294 (596)
                      |..|+...++..+.+||.+|....  ....+..|.|+||+||..|++.+.++|+=+|+|+..+|..|+|+|.||-+.|..
T Consensus       628 Ll~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~rda~g~t~l~yar~a~sq  707 (749)
T KOG0705|consen  628 LLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMARDAHGRTALFYARQAGSQ  707 (749)
T ss_pred             HHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCccceecccCCchhhhhHhhcccH
Confidence            666777788888999999986543  333456788999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHCCCCcc
Q psy904          295 SVVELLCKHGADID  308 (596)
Q Consensus       295 ~iv~~Ll~~gad~~  308 (596)
                      +++..|+++|+..+
T Consensus       708 ec~d~llq~gcp~e  721 (749)
T KOG0705|consen  708 ECIDVLLQYGCPDE  721 (749)
T ss_pred             HHHHHHHHcCCCcc
Confidence            99999999998654


No 105
>KOG0522|consensus
Probab=98.37  E-value=8.2e-07  Score=90.55  Aligned_cols=87  Identities=26%  Similarity=0.284  Sum_probs=51.2

Q ss_pred             HHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCChHHHHHHhcCcHH
Q psy904          216 PLMEAASGGYVEVGRVLLDKGADVNAPPVPSSRDTALTIAADKGHCRFVELLLSKGAQVEVKNKKGNSPLWLAANGGHLS  295 (596)
Q Consensus       216 ~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~g~di~~~d~~g~TpL~~A~~~g~~~  295 (596)
                      |||+++.....+-+..++...+...+...+..|.||||+|+..|+...+..|+.+|+|+..+|+.|++|||.|+..|+-.
T Consensus        23 ~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~~gWs~L~EAv~~g~~q  102 (560)
T KOG0522|consen   23 PLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSIKNNEGWSPLHEAVSTGNEQ  102 (560)
T ss_pred             ccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccccccccccHHHHHHHcCCHH
Confidence            46666665555444433222232233334555666666666666666666666666666666666666666666666666


Q ss_pred             HHHHHHH
Q psy904          296 VVELLCK  302 (596)
Q Consensus       296 iv~~Ll~  302 (596)
                      ++..++.
T Consensus       103 ~i~~vlr  109 (560)
T KOG0522|consen  103 IITEVLR  109 (560)
T ss_pred             HHHHHHH
Confidence            6655554


No 106
>KOG0521|consensus
Probab=98.33  E-value=5.2e-07  Score=100.05  Aligned_cols=103  Identities=32%  Similarity=0.356  Sum_probs=91.0

Q ss_pred             hCCCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCChHHHHHHhcCcHHHHHHHHHCCCCcccCCCC
Q psy904          234 DKGADVNAPPVPSSRDTALTIAADKGHCRFVELLLSKGAQVEVKNKKGNSPLWLAANGGHLSVVELLCKHGADIDSQDNR  313 (596)
Q Consensus       234 ~~g~~~~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~g~di~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~~~~  313 (596)
                      ..+++++....-..|.|+||.|+..+..-++++|+++|+++|..|..|+||||.+...|+...+..|+++|+++++.+..
T Consensus       642 ~~~~~~n~~~~~~~~~s~lh~a~~~~~~~~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a~~~~  721 (785)
T KOG0521|consen  642 AHGCCENWPVVLCIGCSLLHVAVGTGDSGAVELLLQNGADVNALDSKGRTPLHHATASGHTSIACLLLKRGADPNAFDPD  721 (785)
T ss_pred             cchhhhccchhhhcccchhhhhhccchHHHHHHHHhcCCcchhhhccCCCcchhhhhhcccchhhhhccccccccccCcc
Confidence            34555565545567889999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCHHHHHHHcCCHHHHHHHHhC
Q psy904          314 KVSCLMAAFRKGHVKAVRWMVNH  336 (596)
Q Consensus       314 g~t~L~~A~~~g~~~iv~~Ll~~  336 (596)
                      |.+|+++|....+.+++-+|.-.
T Consensus       722 ~~~~l~~a~~~~~~d~~~l~~l~  744 (785)
T KOG0521|consen  722 GKLPLDIAMEAANADIVLLLRLA  744 (785)
T ss_pred             CcchhhHHhhhccccHHHHHhhh
Confidence            99999999888777777665543


No 107
>KOG0522|consensus
Probab=98.29  E-value=1.7e-06  Score=88.36  Aligned_cols=89  Identities=24%  Similarity=0.333  Sum_probs=63.6

Q ss_pred             cHHHHHHHcCcHHHHHHHH--HCCCCCCCCCCCCChHHHHHHhcCcHHHHHHHHHCCCCcccCCCCCCCHHHHHHHcCCH
Q psy904          250 TALTIAADKGHCRFVELLL--SKGAQVEVKNKKGNSPLWLAANGGHLSVVELLCKHGADIDSQDNRKVSCLMAAFRKGHV  327 (596)
Q Consensus       250 t~L~~A~~~~~~~iv~~Ll--~~g~di~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~  327 (596)
                      -|||+++.....+-+..++  +.+..++..|..|.||||+|+..|+...+..|+.+|+++...|..|++|||-|+..|+.
T Consensus        22 ~~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~~gWs~L~EAv~~g~~  101 (560)
T KOG0522|consen   22 KPLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSIKNNEGWSPLHEAVSTGNE  101 (560)
T ss_pred             cccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccccccccccHHHHHHHcCCH
Confidence            4577777766665444322  23456677777788888888888888888888888888888888888888888888877


Q ss_pred             HHHHHHHhCcC
Q psy904          328 KAVRWMVNHVA  338 (596)
Q Consensus       328 ~iv~~Ll~~~~  338 (596)
                      .++.-++.+.-
T Consensus       102 q~i~~vlr~~~  112 (560)
T KOG0522|consen  102 QIITEVLRHLK  112 (560)
T ss_pred             HHHHHHHHHhH
Confidence            77776666543


No 108
>KOG3609|consensus
Probab=98.22  E-value=9.3e-06  Score=87.77  Aligned_cols=127  Identities=28%  Similarity=0.309  Sum_probs=106.0

Q ss_pred             CCCCcHHHHHHhcCcHHHHHHHHHC--C--CCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccccCCCChHHHH
Q psy904            9 SNHDTALTLACAGGHEELVELLLSR--G--ADIEHRDKKGFTPLILAATAGHDKVVDILLNHKADMEAQSERTKDTPLSL   84 (596)
Q Consensus         9 ~~g~t~L~~A~~~g~~~ivk~Ll~~--g--~~i~~~d~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~   84 (596)
                      +.+.-.+..||..|++-.|+..++.  .  .++|..|.-|.++|+.|+.+.+.+++++|++++...        ..+|.+
T Consensus        23 ~~~e~~fL~a~E~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~--------gdALL~   94 (822)
T KOG3609|consen   23 NEGEKGFLLAHENGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSEE--------GDALLL   94 (822)
T ss_pred             chhhHHHHHHHHcCChHHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCcccc--------chHHHH
Confidence            3445667799999999999999985  2  678999999999999999999999999999987654        369999


Q ss_pred             HHHCCcHHHHHHHHhCCCCcc----------CCCCCCCcHHHHHHhcCCHHHHHHHHhCCCCccccCCC
Q psy904           85 ACSGGRYEVVELLLTRGANKE----------HRNVSDYTPLSLAASGGYVNIIKLLLTHGAEINSRTGS  143 (596)
Q Consensus        85 A~~~g~~eivk~LL~~g~~~~----------~~d~~g~t~L~~A~~~g~~eiv~~Ll~~g~~~~~~~~~  143 (596)
                      |+..|...+|+.++.+.....          ..-.-+.|||.+|+..++++|+++|+.+|+.+..+...
T Consensus        95 aI~~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~kg~~i~~PH~~  163 (822)
T KOG3609|consen   95 AIAVGSVPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNNFEILQCLLTRGHCIPIPHDI  163 (822)
T ss_pred             HHHHHHHHHHHHHHhcccccchhccccccCcccCCCCccHHHHHHHhcchHHHHHHHHcCCCCCCCccc
Confidence            999999999999998743321          12234679999999999999999999999987766544


No 109
>PTZ00121 MAEBL; Provisional
Probab=98.19  E-value=0.0001  Score=83.13  Aligned_cols=8  Identities=38%  Similarity=0.651  Sum_probs=3.3

Q ss_pred             CCCCCCCC
Q psy904          536 SGIDANSQ  543 (596)
Q Consensus       536 ~~~~~~~~  543 (596)
                      +|.|+|+.
T Consensus      1860 ~~~~~~~~ 1867 (2084)
T PTZ00121       1860 NGEDGNKE 1867 (2084)
T ss_pred             cccccccc
Confidence            34444443


No 110
>KOG0511|consensus
Probab=98.18  E-value=5.7e-06  Score=80.75  Aligned_cols=69  Identities=30%  Similarity=0.406  Sum_probs=40.8

Q ss_pred             HHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCChHHHHHHhcCcHHHHHHHHHCCCCcccCCCCCCCHHH
Q psy904          251 ALTIAADKGHCRFVELLLSKGAQVEVKNKKGNSPLWLAANGGHLSVVELLCKHGADIDSQDNRKVSCLM  319 (596)
Q Consensus       251 ~L~~A~~~~~~~iv~~Ll~~g~di~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~~~~g~t~L~  319 (596)
                      -|..||+.|..+.|++|++.|+++|.+|....+||.+|+..||.++|++|+++||--....-.|..++.
T Consensus        39 elceacR~GD~d~v~~LVetgvnVN~vD~fD~spL~lAsLcGHe~vvklLLenGAiC~rdtf~G~RC~Y  107 (516)
T KOG0511|consen   39 ELCEACRAGDVDRVRYLVETGVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGAICSRDTFDGDRCHY  107 (516)
T ss_pred             HHHHHhhcccHHHHHHHHHhCCCcchhhcccccHHHHHHHcCcHHHHHHHHHcCCcccccccCcchhhh
Confidence            355566666666666666666666666666666666666666666666666666544444444544443


No 111
>KOG0511|consensus
Probab=98.10  E-value=9.7e-06  Score=79.19  Aligned_cols=73  Identities=29%  Similarity=0.362  Sum_probs=62.7

Q ss_pred             CcHHHHHHhcCcHHHHHHHHHCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccccCCCChHHHHH
Q psy904           12 DTALTLACAGGHEELVELLLSRGADIEHRDKKGFTPLILAATAGHDKVVDILLNHKADMEAQSERTKDTPLSLA   85 (596)
Q Consensus        12 ~t~L~~A~~~g~~~ivk~Ll~~g~~i~~~d~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A   85 (596)
                      ..-|..||..|+++.|++|++.|+++|.+|....+||.+|+..||.++|++|+++|+-.... ...|..++.-|
T Consensus        37 f~elceacR~GD~d~v~~LVetgvnVN~vD~fD~spL~lAsLcGHe~vvklLLenGAiC~rd-tf~G~RC~Yga  109 (516)
T KOG0511|consen   37 FGELCEACRAGDVDRVRYLVETGVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGAICSRD-TFDGDRCHYGA  109 (516)
T ss_pred             hHHHHHHhhcccHHHHHHHHHhCCCcchhhcccccHHHHHHHcCcHHHHHHHHHcCCccccc-ccCcchhhhhh
Confidence            55688999999999999999999999999999999999999999999999999999876543 34555554433


No 112
>KOG2505|consensus
Probab=98.10  E-value=2.4e-05  Score=79.20  Aligned_cols=63  Identities=16%  Similarity=0.092  Sum_probs=54.2

Q ss_pred             cHHHHHHHHHCCCCCCC------CCCCCChHHHHHHhcCcHHHHHHHHHCCCCcccCCCCCCCHHHHHH
Q psy904          260 HCRFVELLLSKGAQVEV------KNKKGNSPLWLAANGGHLSVVELLCKHGADIDSQDNRKVSCLMAAF  322 (596)
Q Consensus       260 ~~~iv~~Ll~~g~di~~------~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~~~~g~t~L~~A~  322 (596)
                      -...|++|.+++++.|.      .+..-.|+||||+..|.-.+|.+||+.|+|+...|..|.||+.++.
T Consensus       403 ~p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~Grtpy~ls~  471 (591)
T KOG2505|consen  403 EPDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKDGAGRTPYSLSA  471 (591)
T ss_pred             chhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchhcccCCCCcccccc
Confidence            35688999999877653      2344568999999999999999999999999999999999999876


No 113
>KOG4364|consensus
Probab=98.07  E-value=0.00014  Score=76.09  Aligned_cols=6  Identities=33%  Similarity=0.733  Sum_probs=4.0

Q ss_pred             cccccc
Q psy904          573 FPCYWT  578 (596)
Q Consensus       573 ~~~~~~  578 (596)
                      -|-||.
T Consensus       491 RP~YyG  496 (811)
T KOG4364|consen  491 RPGYYG  496 (811)
T ss_pred             CCcccc
Confidence            377875


No 114
>KOG0520|consensus
Probab=97.88  E-value=1.7e-05  Score=87.58  Aligned_cols=127  Identities=17%  Similarity=0.177  Sum_probs=99.3

Q ss_pred             ccccCCCChHHHHHHhcCcHHHHHHHHhC-CCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHH-HCCCCCCCCCCCCChH
Q psy904          207 EHRAKTGLTPLMEAASGGYVEVGRVLLDK-GADVNAPPVPSSRDTALTIAADKGHCRFVELLL-SKGAQVEVKNKKGNSP  284 (596)
Q Consensus       207 ~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~-g~~~~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll-~~g~di~~~d~~g~Tp  284 (596)
                      ......|.+.+|+++..++.-++..+++- |.....  .+..|...+|.++ .+.+++.-+|+ -+|..++++|..|+||
T Consensus       568 ~~~~~r~~lllhL~a~~lyawLie~~~e~~~~~~~e--ld~d~qgV~hfca-~lg~ewA~ll~~~~~~ai~i~D~~G~tp  644 (975)
T KOG0520|consen  568 SSVNFRDMLLLHLLAELLYAWLIEKVIEWAGSGDLE--LDRDGQGVIHFCA-ALGYEWAFLPISADGVAIDIRDRNGWTP  644 (975)
T ss_pred             ccCCCcchHHHHHHHHHhHHHHHHHHhcccccCchh--hcccCCChhhHhh-hcCCceeEEEEeecccccccccCCCCcc
Confidence            34456788999999999999999999985 433333  5566667777744 45555554444 4789999999999999


Q ss_pred             HHHHHhcCcHHHHHHHHHCCCCcc------cCCCCCCCHHHHHHHcCCHHHHHHHHhC
Q psy904          285 LWLAANGGHLSVVELLCKHGADID------SQDNRKVSCLMAAFRKGHVKAVRWMVNH  336 (596)
Q Consensus       285 L~~A~~~g~~~iv~~Ll~~gad~~------~~~~~g~t~L~~A~~~g~~~iv~~Ll~~  336 (596)
                      ||+|+..|+..++..|+..|++..      ...-.|.|+..+|..+|+..+..||-+.
T Consensus       645 L~wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~lse~  702 (975)
T KOG0520|consen  645 LHWAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYLSEK  702 (975)
T ss_pred             cchHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchHHHHhhh
Confidence            999999999999999998876543      3345699999999999999998888654


No 115
>KOG2384|consensus
Probab=97.83  E-value=4.1e-05  Score=68.11  Aligned_cols=68  Identities=26%  Similarity=0.381  Sum_probs=50.4

Q ss_pred             CCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccccCCCChHHHHHHHCCcHHHHHHHHhCC
Q psy904           34 GADIEHRDKKGFTPLILAATAGHDKVVDILLNHKADMEAQSERTKDTPLSLACSGGRYEVVELLLTRG  101 (596)
Q Consensus        34 g~~i~~~d~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~~~g~~eivk~LL~~g  101 (596)
                      +.++|.+|.+|+|+|+.|+..|+.+.+.||+.+|....-..+..+.+++.+|-..|..+++..|.+..
T Consensus         2 e~~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~   69 (223)
T KOG2384|consen    2 EGNINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFEND   69 (223)
T ss_pred             CCCccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHHh
Confidence            45677788888888888888888888888888875555555667777777777777777777776653


No 116
>KOG0521|consensus
Probab=97.77  E-value=3e-05  Score=86.39  Aligned_cols=89  Identities=34%  Similarity=0.404  Sum_probs=81.1

Q ss_pred             CCCChHHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCChHHHHHHh
Q psy904          211 KTGLTPLMEAASGGYVEVGRVLLDKGADVNAPPVPSSRDTALTIAADKGHCRFVELLLSKGAQVEVKNKKGNSPLWLAAN  290 (596)
Q Consensus       211 ~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~g~di~~~d~~g~TpL~~A~~  290 (596)
                      ..|.++||.|+..|..-++.+|+++|+++|.  .+..|++|||.+...|+...+..|+.+|++++..+..|.+||++|..
T Consensus       654 ~~~~s~lh~a~~~~~~~~~e~ll~~ga~vn~--~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a~~~~~~~~l~~a~~  731 (785)
T KOG0521|consen  654 CIGCSLLHVAVGTGDSGAVELLLQNGADVNA--LDSKGRTPLHHATASGHTSIACLLLKRGADPNAFDPDGKLPLDIAME  731 (785)
T ss_pred             hcccchhhhhhccchHHHHHHHHhcCCcchh--hhccCCCcchhhhhhcccchhhhhccccccccccCccCcchhhHHhh
Confidence            4678999999999999999999999999888  77899999999999999999999999999999999999999999987


Q ss_pred             cCcHHHHHHHH
Q psy904          291 GGHLSVVELLC  301 (596)
Q Consensus       291 ~g~~~iv~~Ll  301 (596)
                      ..+.+++-+|.
T Consensus       732 ~~~~d~~~l~~  742 (785)
T KOG0521|consen  732 AANADIVLLLR  742 (785)
T ss_pred             hccccHHHHHh
Confidence            76666665553


No 117
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=97.56  E-value=0.0013  Score=75.16  Aligned_cols=6  Identities=0%  Similarity=-0.059  Sum_probs=2.3

Q ss_pred             HHHHHh
Q psy904           94 VELLLT   99 (596)
Q Consensus        94 vk~LL~   99 (596)
                      +.+|..
T Consensus       131 LaYLHs  136 (1021)
T PTZ00266        131 LAYCHN  136 (1021)
T ss_pred             HHHHHh
Confidence            334433


No 118
>KOG0520|consensus
Probab=97.56  E-value=0.0001  Score=81.75  Aligned_cols=132  Identities=17%  Similarity=0.184  Sum_probs=87.2

Q ss_pred             ccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccccCCCChHHHHHHHCCcHHHHHHHHhCCCCccCCCCCCCcHHH
Q psy904           37 IEHRDKKGFTPLILAATAGHDKVVDILLNHKADMEAQSERTKDTPLSLACSGGRYEVVELLLTRGANKEHRNVSDYTPLS  116 (596)
Q Consensus        37 i~~~d~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~~~g~~eivk~LL~~g~~~~~~d~~g~t~L~  116 (596)
                      +......|++.+|+++..++.-++..+++--.......+..+...+|+++..|.--.+..++-.|..++++|..|+||||
T Consensus       567 ~~~~~~r~~lllhL~a~~lyawLie~~~e~~~~~~~eld~d~qgV~hfca~lg~ewA~ll~~~~~~ai~i~D~~G~tpL~  646 (975)
T KOG0520|consen  567 SSSVNFRDMLLLHLLAELLYAWLIEKVIEWAGSGDLELDRDGQGVIHFCAALGYEWAFLPISADGVAIDIRDRNGWTPLH  646 (975)
T ss_pred             cccCCCcchHHHHHHHHHhHHHHHHHHhcccccCchhhcccCCChhhHhhhcCCceeEEEEeecccccccccCCCCcccc
Confidence            34445567788888888888877777777522222333455667777754444333333444557777888888888888


Q ss_pred             HHHhcCCHHHHHHHHhCCCCcc----ccCCCCCCCcHHHHHHHcCCHHHHHHHHhc
Q psy904          117 LAASGGYVNIIKLLLTHGAEIN----SRTGSKLGISPLMLAAMNGHTAAVKLLLDM  168 (596)
Q Consensus       117 ~A~~~g~~eiv~~Ll~~g~~~~----~~~~~~~g~t~L~~A~~~g~~eiv~~Ll~~  168 (596)
                      +|+..|+..++..|+..|+...    .......|.|+..+|..+|+..+.-+|-+.
T Consensus       647 wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~lse~  702 (975)
T KOG0520|consen  647 WAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYLSEK  702 (975)
T ss_pred             hHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchHHHHhhh
Confidence            8888888888888876655432    222334478888888888888887777664


No 119
>KOG2505|consensus
Probab=97.30  E-value=0.0026  Score=64.94  Aligned_cols=67  Identities=24%  Similarity=0.239  Sum_probs=57.0

Q ss_pred             cCcHHHHHHHHhCCCCCCCCCCC----CCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCChHHHHHH
Q psy904          223 GGYVEVGRVLLDKGADVNAPPVP----SSRDTALTIAADKGHCRFVELLLSKGAQVEVKNKKGNSPLWLAA  289 (596)
Q Consensus       223 ~g~~~iv~~Ll~~g~~~~~~~~~----~~g~t~L~~A~~~~~~~iv~~Ll~~g~di~~~d~~g~TpL~~A~  289 (596)
                      ..-...+.+|.+++.+.|....+    ....|+||+|+..|...+|.+||+.|+|+...|..|.||.+++.
T Consensus       401 ~~~p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~Grtpy~ls~  471 (591)
T KOG2505|consen  401 KPEPDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKDGAGRTPYSLSA  471 (591)
T ss_pred             cCchhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchhcccCCCCcccccc
Confidence            34477889999998887654332    34569999999999999999999999999999999999999886


No 120
>PF03158 DUF249:  Multigene family 530 protein;  InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=96.95  E-value=0.0077  Score=53.93  Aligned_cols=44  Identities=20%  Similarity=0.268  Sum_probs=26.7

Q ss_pred             HHHHHHcCCHHHHHHHHhcCCCcccccccCCCcHHHHHHHcCCHHHHHHHH
Q psy904          150 LMLAAMNGHTAAVKLLLDMGSDINAQIETNRNTALTLACFQGRHEVVSLLL  200 (596)
Q Consensus       150 L~~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll  200 (596)
                      |..|+..|-+.++.-.+.+|.+++.       ++|..|+.+++..++.+++
T Consensus       147 l~~a~~kgll~F~letlkygg~~~~-------~vls~Av~ynhRkIL~yfi  190 (192)
T PF03158_consen  147 LEKAAAKGLLPFVLETLKYGGNVDI-------IVLSQAVKYNHRKILDYFI  190 (192)
T ss_pred             HHHHHHCCCHHHHHHHHHcCCcccH-------HHHHHHHHhhHHHHHHHhh
Confidence            4556666666666666666665543       4566666666666666654


No 121
>PF03158 DUF249:  Multigene family 530 protein;  InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=96.84  E-value=0.0087  Score=53.61  Aligned_cols=44  Identities=30%  Similarity=0.322  Sum_probs=27.1

Q ss_pred             HHHHHhcCcHHHHHHHHHCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHH
Q psy904          285 LWLAANGGHLSVVELLCKHGADIDSQDNRKVSCLMAAFRKGHVKAVRWMV  334 (596)
Q Consensus       285 L~~A~~~g~~~iv~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~~iv~~Ll  334 (596)
                      |..|+..|-+..|--.+.+|.+++.      ++|..|+..+|..|+.+++
T Consensus       147 l~~a~~kgll~F~letlkygg~~~~------~vls~Av~ynhRkIL~yfi  190 (192)
T PF03158_consen  147 LEKAAAKGLLPFVLETLKYGGNVDI------IVLSQAVKYNHRKILDYFI  190 (192)
T ss_pred             HHHHHHCCCHHHHHHHHHcCCcccH------HHHHHHHHhhHHHHHHHhh
Confidence            5566666666666666666655543      5666666666666666655


No 122
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=96.61  E-value=0.0033  Score=37.65  Aligned_cols=27  Identities=59%  Similarity=0.920  Sum_probs=15.6

Q ss_pred             CChHHHHHHhcCcHHHHHHHHHCCCCc
Q psy904          281 GNSPLWLAANGGHLSVVELLCKHGADI  307 (596)
Q Consensus       281 g~TpL~~A~~~g~~~iv~~Ll~~gad~  307 (596)
                      |.||||+|+..++.+++++|+.+|.++
T Consensus         2 ~~~~l~~~~~~~~~~~~~~ll~~~~~~   28 (30)
T smart00248        2 GRTPLHLAAENGNLEVVKLLLDKGADI   28 (30)
T ss_pred             CCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence            455666666666666666666555543


No 123
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=96.51  E-value=0.0043  Score=37.13  Aligned_cols=27  Identities=52%  Similarity=0.741  Sum_probs=17.7

Q ss_pred             CCcHHHHHHhcCcHHHHHHHHHCCCCc
Q psy904           11 HDTALTLACAGGHEELVELLLSRGADI   37 (596)
Q Consensus        11 g~t~L~~A~~~g~~~ivk~Ll~~g~~i   37 (596)
                      |.|+||+|+..|+.+++++|+..|.++
T Consensus         2 ~~~~l~~~~~~~~~~~~~~ll~~~~~~   28 (30)
T smart00248        2 GRTPLHLAAENGNLEVVKLLLDKGADI   28 (30)
T ss_pred             CCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence            556666666666666666666666544


No 124
>PF06128 Shigella_OspC:  Shigella flexneri OspC protein;  InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=96.49  E-value=0.023  Score=52.49  Aligned_cols=113  Identities=20%  Similarity=0.182  Sum_probs=53.0

Q ss_pred             HHHHHHHcCCHHHHHHHHhcCCCcccccCCCChHHHHHHhcCcHHHHHHHHhCCCCCCCCCCC----CCCCcHHHHHHH-
Q psy904          183 ALTLACFQGRHEVVSLLLDRKANVEHRAKTGLTPLMEAASGGYVEVGRVLLDKGADVNAPPVP----SSRDTALTIAAD-  257 (596)
Q Consensus       183 ~L~~A~~~~~~~ii~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~----~~g~t~L~~A~~-  257 (596)
                      .|.-|+...+.+-+.-++...       ....++|.+++.++..+++-+|+.+-   +....+    ..+..-+.++.. 
T Consensus       156 sledAV~AsN~~~i~~~VtdK-------kdA~~Am~~si~~~K~dva~~lls~f---~ft~~dv~~~~~~~ydieY~LS~  225 (284)
T PF06128_consen  156 SLEDAVKASNYEEISNLVTDK-------KDAHQAMWLSIGNAKEDVALYLLSKF---NFTKQDVASMEKELYDIEYLLSE  225 (284)
T ss_pred             cHHHHHhhcCHHHHHHHhcch-------HHHHHHHHHHhcccHHHHHHHHHhhc---ceecchhhhcCcchhhHHHHHhh
Confidence            445555555555555554321       12235566666666666666666541   110000    001111111111 


Q ss_pred             -cCcHHHHHHHHHCC-CCCCC---CCCCCChHHHHHHhcCcHHHHHHHHHCCC
Q psy904          258 -KGHCRFVELLLSKG-AQVEV---KNKKGNSPLWLAANGGHLSVVELLCKHGA  305 (596)
Q Consensus       258 -~~~~~iv~~Ll~~g-~di~~---~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga  305 (596)
                       ..+..++++++++| +++|.   +-+.|.|.|.-|+.+++.+|+.+||.+||
T Consensus       226 h~a~~kvL~~Fi~~Glv~vN~~F~~~NSGdtMLDNA~Ky~~~emi~~Llk~GA  278 (284)
T PF06128_consen  226 HSASYKVLEYFINRGLVDVNKKFQKVNSGDTMLDNAMKYKNSEMIAFLLKYGA  278 (284)
T ss_pred             cCCcHHHHHHHHhccccccchhhhccCCcchHHHhHHhcCcHHHHHHHHHcCc
Confidence             12345566666665 45543   23455566666666666666666666655


No 125
>PF06128 Shigella_OspC:  Shigella flexneri OspC protein;  InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=96.47  E-value=0.027  Score=52.03  Aligned_cols=115  Identities=16%  Similarity=0.146  Sum_probs=84.6

Q ss_pred             HHHHHHhcCcHHHHHHHHhCCCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCC----CCCChHHHHHHh-
Q psy904          216 PLMEAASGGYVEVGRVLLDKGADVNAPPVPSSRDTALTIAADKGHCRFVELLLSKGAQVEVKN----KKGNSPLWLAAN-  290 (596)
Q Consensus       216 ~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~g~di~~~d----~~g~TpL~~A~~-  290 (596)
                      .|-.|+...+++.+.-++..-         ....++|.+++..+.-+++-+|+++- .+...|    ..+.--+.|+.+ 
T Consensus       156 sledAV~AsN~~~i~~~VtdK---------kdA~~Am~~si~~~K~dva~~lls~f-~ft~~dv~~~~~~~ydieY~LS~  225 (284)
T PF06128_consen  156 SLEDAVKASNYEEISNLVTDK---------KDAHQAMWLSIGNAKEDVALYLLSKF-NFTKQDVASMEKELYDIEYLLSE  225 (284)
T ss_pred             cHHHHHhhcCHHHHHHHhcch---------HHHHHHHHHHhcccHHHHHHHHHhhc-ceecchhhhcCcchhhHHHHHhh
Confidence            367788888888777776432         23458899999999999999999861 111111    123334555554 


Q ss_pred             -cCcHHHHHHHHHCC-CCcc---cCCCCCCCHHHHHHHcCCHHHHHHHHhCcCCC
Q psy904          291 -GGHLSVVELLCKHG-ADID---SQDNRKVSCLMAAFRKGHVKAVRWMVNHVAQF  340 (596)
Q Consensus       291 -~g~~~iv~~Ll~~g-ad~~---~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~  340 (596)
                       ..+..+++++|.+| +++|   .+-+.|.|-|+.|+++++.+++.+||.+|+..
T Consensus       226 h~a~~kvL~~Fi~~Glv~vN~~F~~~NSGdtMLDNA~Ky~~~emi~~Llk~GA~~  280 (284)
T PF06128_consen  226 HSASYKVLEYFINRGLVDVNKKFQKVNSGDTMLDNAMKYKNSEMIAFLLKYGAIS  280 (284)
T ss_pred             cCCcHHHHHHHHhccccccchhhhccCCcchHHHhHHhcCcHHHHHHHHHcCccc
Confidence             44678999999998 5666   34578999999999999999999999999853


No 126
>PLN03218 maturation of RBCL 1; Provisional
Probab=95.86  E-value=0.14  Score=60.19  Aligned_cols=298  Identities=11%  Similarity=0.074  Sum_probs=135.3

Q ss_pred             HHHHHHhcCcHHHHHH----HHHCCCCccccCCCCCcHHHHHHHcCCHHH----HHHHHhCCCCccccccCCCChHHHHH
Q psy904           14 ALTLACAGGHEELVEL----LLSRGADIEHRDKKGFTPLILAATAGHDKV----VDILLNHKADMEAQSERTKDTPLSLA   85 (596)
Q Consensus        14 ~L~~A~~~g~~~ivk~----Ll~~g~~i~~~d~~g~t~L~~A~~~g~~ei----v~~Ll~~~~~~~~~~~~~~~t~L~~A   85 (596)
                      .|..++..|+++....    +...|..++...  ..+.|...+..|.++.    +..+...|..++..   ...+.+...
T Consensus       443 LL~a~~k~g~~e~A~~lf~~M~~~Gl~pD~~t--ynsLI~~y~k~G~vd~A~~vf~eM~~~Gv~Pdvv---TynaLI~gy  517 (1060)
T PLN03218        443 LMSVCASSQDIDGALRVLRLVQEAGLKADCKL--YTTLISTCAKSGKVDAMFEVFHEMVNAGVEANVH---TFGALIDGC  517 (1060)
T ss_pred             HHHHHHhCcCHHHHHHHHHHHHHcCCCCCHHH--HHHHHHHHHhCcCHHHHHHHHHHHHHcCCCCCHH---HHHHHHHHH
Confidence            4444555565443333    333455444322  2245555666666653    33333444433322   122445555


Q ss_pred             HHCCcHH----HHHHHHhCCCCccCCCCCCCcHHHHHHhcCCHHHHHHHHh------CCCCccccCCCCCCCcHHHHHHH
Q psy904           86 CSGGRYE----VVELLLTRGANKEHRNVSDYTPLSLAASGGYVNIIKLLLT------HGAEINSRTGSKLGISPLMLAAM  155 (596)
Q Consensus        86 ~~~g~~e----ivk~LL~~g~~~~~~d~~g~t~L~~A~~~g~~eiv~~Ll~------~g~~~~~~~~~~~g~t~L~~A~~  155 (596)
                      +..|+++    ++..+...|..++...  ..+.|...+..|.++-...++.      .|..++...    ..+.+...+.
T Consensus       518 ~k~G~~eeAl~lf~~M~~~Gv~PD~vT--YnsLI~a~~k~G~~deA~~lf~eM~~~~~gi~PD~vT----ynaLI~ay~k  591 (1060)
T PLN03218        518 ARAGQVAKAFGAYGIMRSKNVKPDRVV--FNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHIT----VGALMKACAN  591 (1060)
T ss_pred             HHCcCHHHHHHHHHHHHHcCCCCCHHH--HHHHHHHHHHCCCHHHHHHHHHHHHHhcCCCCCcHHH----HHHHHHHHHH
Confidence            6666654    3334444555444221  1244555556666654333332      122222111    1234444556


Q ss_pred             cCCHHHH----HHHHhcCCCcccccccCCCcHHHHHHHcCCHHHHH----HHHhcCCCcccccCCCChHHHHHHhcCcHH
Q psy904          156 NGHTAAV----KLLLDMGSDINAQIETNRNTALTLACFQGRHEVVS----LLLDRKANVEHRAKTGLTPLMEAASGGYVE  227 (596)
Q Consensus       156 ~g~~eiv----~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~----~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~  227 (596)
                      .|+++-.    +.+...+..++..   ..++.+...+..|+.+.+.    .+...|..++...  -.+.+...+..|..+
T Consensus       592 ~G~ldeA~elf~~M~e~gi~p~~~---tynsLI~ay~k~G~~deAl~lf~eM~~~Gv~PD~~T--ynsLI~a~~k~G~~e  666 (1060)
T PLN03218        592 AGQVDRAKEVYQMIHEYNIKGTPE---VYTIAVNSCSQKGDWDFALSIYDDMKKKGVKPDEVF--FSALVDVAGHAGDLD  666 (1060)
T ss_pred             CCCHHHHHHHHHHHHHcCCCCChH---HHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCCHHH--HHHHHHHHHhCCCHH
Confidence            6776533    3333444333221   2235566666677655333    3334455544221  123444455566654


Q ss_pred             ----HHHHHHhCCCCCCCCCCCCCCCcHHHHHHHcCcHHH----HHHHHHCCCCCCCCCCCCChHHHHHHhcCcHH----
Q psy904          228 ----VGRVLLDKGADVNAPPVPSSRDTALTIAADKGHCRF----VELLLSKGAQVEVKNKKGNSPLWLAANGGHLS----  295 (596)
Q Consensus       228 ----iv~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~i----v~~Ll~~g~di~~~d~~g~TpL~~A~~~g~~~----  295 (596)
                          ++..+...|..++.    ....+.++..+..|.++-    ++.+...|..++...  -++.+...+..|.++    
T Consensus       667 eA~~l~~eM~k~G~~pd~----~tynsLI~ay~k~G~~eeA~~lf~eM~~~g~~Pdvvt--yN~LI~gy~k~G~~eeAle  740 (1060)
T PLN03218        667 KAFEILQDARKQGIKLGT----VSYSSLMGACSNAKNWKKALELYEDIKSIKLRPTVST--MNALITALCEGNQLPKALE  740 (1060)
T ss_pred             HHHHHHHHHHHcCCCCCH----HHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCCHHH--HHHHHHHHHHCCCHHHHHH
Confidence                34444455554443    123455666667777653    333344555554321  122334445666655    


Q ss_pred             HHHHHHHCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHh
Q psy904          296 VVELLCKHGADIDSQDNRKVSCLMAAFRKGHVKAVRWMVN  335 (596)
Q Consensus       296 iv~~Ll~~gad~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~  335 (596)
                      ++..+...|..++....  .+.+......|.++....++.
T Consensus       741 lf~eM~~~Gi~Pd~~Ty--~sLL~a~~k~G~le~A~~l~~  778 (1060)
T PLN03218        741 VLSEMKRLGLCPNTITY--SILLVASERKDDADVGLDLLS  778 (1060)
T ss_pred             HHHHHHHcCCCCCHHHH--HHHHHHHHHCCCHHHHHHHHH
Confidence            33334445666654322  123344455666655544443


No 127
>PF05262 Borrelia_P83:  Borrelia P83/100 protein;  InterPro: IPR007926 This family consists of several Borrelia P83/P100 antigen proteins.
Probab=95.86  E-value=0.33  Score=51.35  Aligned_cols=6  Identities=17%  Similarity=0.319  Sum_probs=2.2

Q ss_pred             CCCCCh
Q psy904          278 NKKGNS  283 (596)
Q Consensus       278 d~~g~T  283 (596)
                      +.-|.|
T Consensus       149 eWpG~t  154 (489)
T PF05262_consen  149 EWPGKT  154 (489)
T ss_pred             cCCCCc
Confidence            333333


No 128
>PLN03218 maturation of RBCL 1; Provisional
Probab=95.52  E-value=0.15  Score=59.88  Aligned_cols=276  Identities=9%  Similarity=0.023  Sum_probs=149.2

Q ss_pred             CcHHHHHHhcCcHHHH----HHHHHCCCCccccCCCCCcHHHHHHHcCCHH----HHHHHHhCCCCccccccCCCChHHH
Q psy904           12 DTALTLACAGGHEELV----ELLLSRGADIEHRDKKGFTPLILAATAGHDK----VVDILLNHKADMEAQSERTKDTPLS   83 (596)
Q Consensus        12 ~t~L~~A~~~g~~~iv----k~Ll~~g~~i~~~d~~g~t~L~~A~~~g~~e----iv~~Ll~~~~~~~~~~~~~~~t~L~   83 (596)
                      ++.+...+..|.++.+    +.+...|..+|...  ..+.|...+..|..+    ++..+...|..++..   ...+.|.
T Consensus       476 nsLI~~y~k~G~vd~A~~vf~eM~~~Gv~PdvvT--ynaLI~gy~k~G~~eeAl~lf~~M~~~Gv~PD~v---TYnsLI~  550 (1060)
T PLN03218        476 TTLISTCAKSGKVDAMFEVFHEMVNAGVEANVHT--FGALIDGCARAGQVAKAFGAYGIMRSKNVKPDRV---VFNALIS  550 (1060)
T ss_pred             HHHHHHHHhCcCHHHHHHHHHHHHHcCCCCCHHH--HHHHHHHHHHCcCHHHHHHHHHHHHHcCCCCCHH---HHHHHHH
Confidence            3556677788887654    44445576665442  235677777888875    344555566554432   1235666


Q ss_pred             HHHHCCcHHHHHHHHh------CCCCccCCCCCCCcHHHHHHhcCCHH----HHHHHHhCCCCccccCCCCCCCcHHHHH
Q psy904           84 LACSGGRYEVVELLLT------RGANKEHRNVSDYTPLSLAASGGYVN----IIKLLLTHGAEINSRTGSKLGISPLMLA  153 (596)
Q Consensus        84 ~A~~~g~~eivk~LL~------~g~~~~~~d~~g~t~L~~A~~~g~~e----iv~~Ll~~g~~~~~~~~~~~g~t~L~~A  153 (596)
                      ..+..|.++-...++.      .|..++..  ...+.+...+..|.++    +++.+...|..++...    ..+.+...
T Consensus       551 a~~k~G~~deA~~lf~eM~~~~~gi~PD~v--TynaLI~ay~k~G~ldeA~elf~~M~e~gi~p~~~t----ynsLI~ay  624 (1060)
T PLN03218        551 ACGQSGAVDRAFDVLAEMKAETHPIDPDHI--TVGALMKACANAGQVDRAKEVYQMIHEYNIKGTPEV----YTIAVNSC  624 (1060)
T ss_pred             HHHHCCCHHHHHHHHHHHHHhcCCCCCcHH--HHHHHHHHHHHCCCHHHHHHHHHHHHHcCCCCChHH----HHHHHHHH
Confidence            6777888765544433      23333321  1235566677788876    4444445554433222    12445556


Q ss_pred             HHcCCHH----HHHHHHhcCCCcccccccCCCcHHHHHHHcCCHHH----HHHHHhcCCCcccccCCCChHHHHHHhcCc
Q psy904          154 AMNGHTA----AVKLLLDMGSDINAQIETNRNTALTLACFQGRHEV----VSLLLDRKANVEHRAKTGLTPLMEAASGGY  225 (596)
Q Consensus       154 ~~~g~~e----iv~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~i----i~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~  225 (596)
                      +..|+++    ++..+...|..++..   ...+.+..++..|+.+-    +..+...|..++..  ...+.+...+..|.
T Consensus       625 ~k~G~~deAl~lf~eM~~~Gv~PD~~---TynsLI~a~~k~G~~eeA~~l~~eM~k~G~~pd~~--tynsLI~ay~k~G~  699 (1060)
T PLN03218        625 SQKGDWDFALSIYDDMKKKGVKPDEV---FFSALVDVAGHAGDLDKAFEILQDARKQGIKLGTV--SYSSLMGACSNAKN  699 (1060)
T ss_pred             HhcCCHHHHHHHHHHHHHcCCCCCHH---HHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCCHH--HHHHHHHHHHhCCC
Confidence            6778765    444445556555432   22356666777777654    44444456555432  22345556667777


Q ss_pred             HHHHHHH----HhCCCCCCCCCCCCCCCcHHHHHHHcCcHH----HHHHHHHCCCCCCCCCCCCChHHHHHHhcCcHHHH
Q psy904          226 VEVGRVL----LDKGADVNAPPVPSSRDTALTIAADKGHCR----FVELLLSKGAQVEVKNKKGNSPLWLAANGGHLSVV  297 (596)
Q Consensus       226 ~~iv~~L----l~~g~~~~~~~~~~~g~t~L~~A~~~~~~~----iv~~Ll~~g~di~~~d~~g~TpL~~A~~~g~~~iv  297 (596)
                      ++-...+    ...|..++.    ...++.+...+..|.++    ++..+...|..++...  -.+.|...+..|.++.+
T Consensus       700 ~eeA~~lf~eM~~~g~~Pdv----vtyN~LI~gy~k~G~~eeAlelf~eM~~~Gi~Pd~~T--y~sLL~a~~k~G~le~A  773 (1060)
T PLN03218        700 WKKALELYEDIKSIKLRPTV----STMNALITALCEGNQLPKALEVLSEMKRLGLCPNTIT--YSILLVASERKDDADVG  773 (1060)
T ss_pred             HHHHHHHHHHHHHcCCCCCH----HHHHHHHHHHHHCCCHHHHHHHHHHHHHcCCCCCHHH--HHHHHHHHHHCCCHHHH
Confidence            6644433    344544432    12335555666777765    4444555676665432  12345555667776654


Q ss_pred             H----HHHHCCCCccc
Q psy904          298 E----LLCKHGADIDS  309 (596)
Q Consensus       298 ~----~Ll~~gad~~~  309 (596)
                      .    .++..|..++.
T Consensus       774 ~~l~~~M~k~Gi~pd~  789 (1060)
T PLN03218        774 LDLLSQAKEDGIKPNL  789 (1060)
T ss_pred             HHHHHHHHHcCCCCCH
Confidence            4    44455766653


No 129
>KOG2072|consensus
Probab=95.30  E-value=6.1  Score=43.84  Aligned_cols=8  Identities=13%  Similarity=0.306  Sum_probs=3.7

Q ss_pred             HHHHHHHH
Q psy904           25 ELVELLLS   32 (596)
Q Consensus        25 ~ivk~Ll~   32 (596)
                      .+|+||.+
T Consensus       150 PWlkFLWe  157 (988)
T KOG2072|consen  150 PWLKFLWE  157 (988)
T ss_pred             HHHHHHHH
Confidence            34455544


No 130
>PF05262 Borrelia_P83:  Borrelia P83/100 protein;  InterPro: IPR007926 This family consists of several Borrelia P83/P100 antigen proteins.
Probab=95.04  E-value=1.8  Score=45.96  Aligned_cols=13  Identities=8%  Similarity=-0.038  Sum_probs=5.1

Q ss_pred             CCCcccCCCCCCC
Q psy904          304 GADIDSQDNRKVS  316 (596)
Q Consensus       304 gad~~~~~~~g~t  316 (596)
                      |.+....+.-|.|
T Consensus       142 Gls~~y~eWpG~t  154 (489)
T PF05262_consen  142 GLSRRYSEWPGKT  154 (489)
T ss_pred             ccccccccCCCCc
Confidence            3333333444433


No 131
>PLN03081 pentatricopeptide (PPR) repeat-containing protein; Provisional
Probab=94.98  E-value=3.3  Score=47.20  Aligned_cols=17  Identities=12%  Similarity=-0.023  Sum_probs=8.9

Q ss_pred             HHHHhcCcHHHHHHHHH
Q psy904          286 WLAANGGHLSVVELLCK  302 (596)
Q Consensus       286 ~~A~~~g~~~iv~~Ll~  302 (596)
                      ..+...|+++....+.+
T Consensus       502 ~a~~~~g~~~~a~~~~~  518 (697)
T PLN03081        502 TACRIHKNLELGRLAAE  518 (697)
T ss_pred             HHHHHcCCcHHHHHHHH
Confidence            33345666665555444


No 132
>PLN03081 pentatricopeptide (PPR) repeat-containing protein; Provisional
Probab=94.62  E-value=9.6  Score=43.39  Aligned_cols=87  Identities=11%  Similarity=0.064  Sum_probs=44.2

Q ss_pred             cHHHHHHhcCcHHH----HHHHHHCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccccCCCChHHHHHHHC
Q psy904           13 TALTLACAGGHEEL----VELLLSRGADIEHRDKKGFTPLILAATAGHDKVVDILLNHKADMEAQSERTKDTPLSLACSG   88 (596)
Q Consensus        13 t~L~~A~~~g~~~i----vk~Ll~~g~~i~~~d~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~~~   88 (596)
                      +.|..++..++.+.    ...++..|..++..  ...+.|...+..|.++-+..+++.-...+..   .-.+.+...+..
T Consensus       128 ~ll~a~~~~~~~~~a~~l~~~m~~~g~~~~~~--~~n~Li~~y~k~g~~~~A~~lf~~m~~~~~~---t~n~li~~~~~~  202 (697)
T PLN03081        128 ALVEACIALKSIRCVKAVYWHVESSGFEPDQY--MMNRVLLMHVKCGMLIDARRLFDEMPERNLA---SWGTIIGGLVDA  202 (697)
T ss_pred             HHHHHHHhCCCHHHHHHHHHHHHHhCCCcchH--HHHHHHHHHhcCCCHHHHHHHHhcCCCCCee---eHHHHHHHHHHC
Confidence            34445555666543    34444456665533  2335566667777777777666655443221   122344444556


Q ss_pred             CcHH----HHHHHHhCCCCc
Q psy904           89 GRYE----VVELLLTRGANK  104 (596)
Q Consensus        89 g~~e----ivk~LL~~g~~~  104 (596)
                      |+++    ++..++..|..+
T Consensus       203 g~~~~A~~lf~~M~~~g~~p  222 (697)
T PLN03081        203 GNYREAFALFREMWEDGSDA  222 (697)
T ss_pred             cCHHHHHHHHHHHHHhCCCC
Confidence            6643    333344445444


No 133
>PLN03077 Protein ECB2; Provisional
Probab=92.97  E-value=22  Score=41.58  Aligned_cols=144  Identities=10%  Similarity=0.013  Sum_probs=68.5

Q ss_pred             cHHHHHHhcCcHHHHHHHH----HCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-hHHHHHHH
Q psy904           13 TALTLACAGGHEELVELLL----SRGADIEHRDKKGFTPLILAATAGHDKVVDILLNHKADMEAQSERTKD-TPLSLACS   87 (596)
Q Consensus        13 t~L~~A~~~g~~~ivk~Ll----~~g~~i~~~d~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~-t~L~~A~~   87 (596)
                      +.|..++..|+++..+.++    ..|..++..  -..+.+...+..|.++-...+++.-...+.    ..+ +.+...+.
T Consensus       293 ~ll~a~~~~g~~~~a~~l~~~~~~~g~~~d~~--~~n~Li~~y~k~g~~~~A~~vf~~m~~~d~----~s~n~li~~~~~  366 (857)
T PLN03077        293 SVISACELLGDERLGREMHGYVVKTGFAVDVS--VCNSLIQMYLSLGSWGEAEKVFSRMETKDA----VSWTAMISGYEK  366 (857)
T ss_pred             HHHHHHHhcCChHHHHHHHHHHHHhCCccchH--HHHHHHHHHHhcCCHHHHHHHHhhCCCCCe----eeHHHHHHHHHh
Confidence            4455556677665544444    456555433  234566777777877776666665332221    122 33444455


Q ss_pred             CCcHH----HHHHHHhCCCCccCCCCCCCcHHHHHHhcCCHH----HHHHHHhCCCCccccCCCCCCCcHHHHHHHcCCH
Q psy904           88 GGRYE----VVELLLTRGANKEHRNVSDYTPLSLAASGGYVN----IIKLLLTHGAEINSRTGSKLGISPLMLAAMNGHT  159 (596)
Q Consensus        88 ~g~~e----ivk~LL~~g~~~~~~d~~g~t~L~~A~~~g~~e----iv~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~g~~  159 (596)
                      .|.++    ++..+...|..++...  -.+.|...+..|.++    +...++..|...+...    ..+.+...+..|++
T Consensus       367 ~g~~~~A~~lf~~M~~~g~~Pd~~t--~~~ll~a~~~~g~~~~a~~l~~~~~~~g~~~~~~~----~n~Li~~y~k~g~~  440 (857)
T PLN03077        367 NGLPDKALETYALMEQDNVSPDEIT--IASVLSACACLGDLDVGVKLHELAERKGLISYVVV----ANALIEMYSKCKCI  440 (857)
T ss_pred             CCCHHHHHHHHHHHHHhCCCCCcee--HHHHHHHHhccchHHHHHHHHHHHHHhCCCcchHH----HHHHHHHHHHcCCH
Confidence            66644    3333344555444321  123344444455544    3333344444333222    11233344555665


Q ss_pred             HHHHHHHhc
Q psy904          160 AAVKLLLDM  168 (596)
Q Consensus       160 eiv~~Ll~~  168 (596)
                      +-...+++.
T Consensus       441 ~~A~~vf~~  449 (857)
T PLN03077        441 DKALEVFHN  449 (857)
T ss_pred             HHHHHHHHh
Confidence            555544443


No 134
>PF11929 DUF3447:  Domain of unknown function (DUF3447);  InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it.  The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=92.78  E-value=0.16  Score=39.32  Aligned_cols=47  Identities=21%  Similarity=0.364  Sum_probs=24.3

Q ss_pred             cHHHHHHhcCcHHHHHHHHHCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhC
Q psy904           13 TALTLACAGGHEELVELLLSRGADIEHRDKKGFTPLILAATAGHDKVVDILLNH   66 (596)
Q Consensus        13 t~L~~A~~~g~~~ivk~Ll~~g~~i~~~d~~g~t~L~~A~~~g~~eiv~~Ll~~   66 (596)
                      ..|..|+.+|+.++++.++..+ .++      ...|..|+...+.++++||+++
T Consensus         8 ~tl~~Ai~GGN~eII~~c~~~~-~~~------~~~l~~AI~~H~n~i~~~l~~~   54 (76)
T PF11929_consen    8 KTLEYAIIGGNFEIINICLKKN-KPD------NDCLEYAIKSHNNEIADWLIEN   54 (76)
T ss_pred             HHHHHHHhCCCHHHHHHHHHHh-ccH------HHHHHHHHHHhhHHHHHHHHHh
Confidence            3455555555555555555433 111      1345555555555555555554


No 135
>PF11929 DUF3447:  Domain of unknown function (DUF3447);  InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it.  The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=92.61  E-value=0.36  Score=37.40  Aligned_cols=46  Identities=20%  Similarity=0.312  Sum_probs=25.5

Q ss_pred             HHHHHHHcCCHHHHHHHHhCCCCccccccCCCChHHHHHHHCCcHHHHHHHHhC
Q psy904           47 PLILAATAGHDKVVDILLNHKADMEAQSERTKDTPLSLACSGGRYEVVELLLTR  100 (596)
Q Consensus        47 ~L~~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~~~g~~eivk~LL~~  100 (596)
                      .|.+|+.+|+.++++.+++.+. ++       ...|..|+...+.++++||++.
T Consensus         9 tl~~Ai~GGN~eII~~c~~~~~-~~-------~~~l~~AI~~H~n~i~~~l~~~   54 (76)
T PF11929_consen    9 TLEYAIIGGNFEIINICLKKNK-PD-------NDCLEYAIKSHNNEIADWLIEN   54 (76)
T ss_pred             HHHHHHhCCCHHHHHHHHHHhc-cH-------HHHHHHHHHHhhHHHHHHHHHh
Confidence            4566666666666666654431 11       1356666666666666666554


No 136
>PLN03077 Protein ECB2; Provisional
Probab=92.10  E-value=8.7  Score=44.93  Aligned_cols=20  Identities=15%  Similarity=0.240  Sum_probs=9.5

Q ss_pred             HHHHHHhcCCHHHHHHHHhC
Q psy904          114 PLSLAASGGYVNIIKLLLTH  133 (596)
Q Consensus       114 ~L~~A~~~g~~eiv~~Ll~~  133 (596)
                      .+...+..|.++-+..+++.
T Consensus       228 Li~~y~k~g~~~~A~~lf~~  247 (857)
T PLN03077        228 LITMYVKCGDVVSARLVFDR  247 (857)
T ss_pred             HHHHHhcCCCHHHHHHHHhc
Confidence            33444445555554444444


No 137
>PF07946 DUF1682:  Protein of unknown function (DUF1682);  InterPro: IPR012879 The members of this family are all hypothetical eukaryotic proteins of unknown function. One member (Q920S6 from SWISSPROT) is described as being an adipocyte-specific protein, but no evidence of this was found. 
Probab=91.57  E-value=0.92  Score=46.05  Aligned_cols=18  Identities=17%  Similarity=0.178  Sum_probs=8.0

Q ss_pred             HHHHHHhcCcHHHHHHHH
Q psy904          284 PLWLAANGGHLSVVELLC  301 (596)
Q Consensus       284 pL~~A~~~g~~~iv~~Ll  301 (596)
                      |-.+++.....++...|+
T Consensus       160 p~~~~vmsEs~e~~~~il  177 (321)
T PF07946_consen  160 PESLVVMSESNEVTDFIL  177 (321)
T ss_pred             CcceEEEEccHhHHHHHh
Confidence            334444444444444443


No 138
>PF07946 DUF1682:  Protein of unknown function (DUF1682);  InterPro: IPR012879 The members of this family are all hypothetical eukaryotic proteins of unknown function. One member (Q920S6 from SWISSPROT) is described as being an adipocyte-specific protein, but no evidence of this was found. 
Probab=89.45  E-value=1.2  Score=45.12  Aligned_cols=21  Identities=5%  Similarity=0.145  Sum_probs=11.2

Q ss_pred             CcHHHHHHHcCcHHHHHHHHH
Q psy904          249 DTALTIAADKGHCRFVELLLS  269 (596)
Q Consensus       249 ~t~L~~A~~~~~~~iv~~Ll~  269 (596)
                      ..|-.+++.....++...|+.
T Consensus       158 ~Lp~~~~vmsEs~e~~~~il~  178 (321)
T PF07946_consen  158 KLPESLVVMSESNEVTDFILT  178 (321)
T ss_pred             CCCcceEEEEccHhHHHHHhC
Confidence            344445555555555555544


No 139
>cd07920 Pumilio Pumilio-family RNA binding domain. Puf repeats (also labelled PUM-HD or Pumilio homology domain) mediate sequence specific RNA binding in fly Pumilio, worm FBF-1 and FBF-2, and many other proteins such as vertebrate Pumilio. These proteins function as translational repressors in early embryonic development by binding to sequences in the 3' UTR of target mRNAs, such as the nanos response element (NRE) in fly Hunchback mRNA, or the point mutation element (PME) in worm fem-3 mRNA. Other proteins that contain Puf domains are also plausible RNA binding proteins. Yeast PUF1 (JSN1), for instance, appears to contain a single RNA-recognition motif (RRM) domain. Puf repeat proteins have been observed to function asymmetrically and may be responsible for creating protein gradients involved in the specification of cell fate and differentiation. Puf domains usually occur as a tandem repeat of 8 domains. This model encompasses all 8 tandem repeats. Some proteins may have fewer (canon
Probab=88.56  E-value=3.9  Score=41.52  Aligned_cols=125  Identities=10%  Similarity=-0.043  Sum_probs=65.2

Q ss_pred             CccCCCCCcHHHHHHhcCcHHHHHHHHHC---CCCccccCCCCCcHHHHHHHcCCHHHHHHHHhC--CCCccccccCCCC
Q psy904            5 SETESNHDTALTLACAGGHEELVELLLSR---GADIEHRDKKGFTPLILAATAGHDKVVDILLNH--KADMEAQSERTKD   79 (596)
Q Consensus         5 ~~~d~~g~t~L~~A~~~g~~~ivk~Ll~~---g~~i~~~d~~g~t~L~~A~~~g~~eiv~~Ll~~--~~~~~~~~~~~~~   79 (596)
                      ...+.+|.-.|..+...++.+....+++.   .+.--..|.+|...+......+..+....++..  |.-.....+..|.
T Consensus        15 l~~~~~gsr~lQ~~l~~~~~~~~~~i~~~l~~~~~~l~~~~~g~~vvq~~l~~~~~~~~~~i~~~~~~~~~~l~~~~~g~   94 (322)
T cd07920          15 FAKDQHGSRFLQQKLEEATPEEKELIFDEILPHVVELMVDPFGNYVIQKLFEHGTEEQRLQLLEKILGHVVRLSLDMYGC   94 (322)
T ss_pred             ccCCchhhHHHHHHhccCCHHHHHHHHHHHHHhHHHHhcCccccHHHHHHHHhCCHHHHHHHHHHHHHHHHHHcccchhH
Confidence            45677888888888888888888777764   111223456677777777777766544444432  1111222334455


Q ss_pred             hHHHHHHHCCcHHHHHHHHhC---CCCccCCCCCCCcHHHHHHhcCCHHHHHH
Q psy904           80 TPLSLACSGGRYEVVELLLTR---GANKEHRNVSDYTPLSLAASGGYVNIIKL  129 (596)
Q Consensus        80 t~L~~A~~~g~~eivk~LL~~---g~~~~~~d~~g~t~L~~A~~~g~~eiv~~  129 (596)
                      -.+..+...+..+....++..   ....-..|..|...+..+...+..+....
T Consensus        95 ~vlqkll~~~~~~~~~~i~~~l~~~~~~L~~d~~gn~Vvq~~l~~~~~~~~~~  147 (322)
T cd07920          95 RVIQKLLESISEEQISLLVKELRGHVVELVKDQNGNHVIQKCIEKFPPEDLQF  147 (322)
T ss_pred             HHHHHHHHhcCHHHHHHHHHHHHHCHHHHhhcccccHHHHHHHHhCCHHHHHH
Confidence            555555554443333333221   01111234455555555555544443333


No 140
>PF15437 PGBA_C:  Plasminogen-binding protein pgbA C-terminal
Probab=81.62  E-value=6.4  Score=30.13  Aligned_cols=14  Identities=43%  Similarity=0.669  Sum_probs=5.9

Q ss_pred             HHHHHHHHHHHHHH
Q psy904          464 ESKRAAQARKRERK  477 (596)
Q Consensus       464 e~~~~~~~~~~~~~  477 (596)
                      ++++++.|+++.++
T Consensus        45 eEkKkAKAeqrA~E   58 (86)
T PF15437_consen   45 EEKKKAKAEQRARE   58 (86)
T ss_pred             HHHHHHHHHHHHHH
Confidence            33444444444433


No 141
>cd07920 Pumilio Pumilio-family RNA binding domain. Puf repeats (also labelled PUM-HD or Pumilio homology domain) mediate sequence specific RNA binding in fly Pumilio, worm FBF-1 and FBF-2, and many other proteins such as vertebrate Pumilio. These proteins function as translational repressors in early embryonic development by binding to sequences in the 3' UTR of target mRNAs, such as the nanos response element (NRE) in fly Hunchback mRNA, or the point mutation element (PME) in worm fem-3 mRNA. Other proteins that contain Puf domains are also plausible RNA binding proteins. Yeast PUF1 (JSN1), for instance, appears to contain a single RNA-recognition motif (RRM) domain. Puf repeat proteins have been observed to function asymmetrically and may be responsible for creating protein gradients involved in the specification of cell fate and differentiation. Puf domains usually occur as a tandem repeat of 8 domains. This model encompasses all 8 tandem repeats. Some proteins may have fewer (canon
Probab=79.93  E-value=18  Score=36.65  Aligned_cols=50  Identities=6%  Similarity=-0.068  Sum_probs=28.1

Q ss_pred             CCCCCcHHHHHHHcCcHHHHHHHHH----CCCCCCCCCCCCChHHHHHHhcCcHH
Q psy904          245 PSSRDTALTIAADKGHCRFVELLLS----KGAQVEVKNKKGNSPLWLAANGGHLS  295 (596)
Q Consensus       245 ~~~g~t~L~~A~~~~~~~iv~~Ll~----~g~di~~~d~~g~TpL~~A~~~g~~~  295 (596)
                      +..|+..+..+...+.......+++    +-..+ ..+..|...+..+...+...
T Consensus       198 d~~Gn~vvq~~l~~~~~~~~~~i~~~l~~~~~~l-~~~k~Gs~Vve~~l~~~~~~  251 (322)
T cd07920         198 DQFGNYVVQHVLELGDPDDTSRIIEKLLGNIVQL-SCHKFASNVVEKCLKHASKE  251 (322)
T ss_pred             CCchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHH-HcCcchHHHHHHHHHHCCHH
Confidence            4567777777777765543333333    21111 34567777777777666533


No 142
>KOG2689|consensus
Probab=77.79  E-value=43  Score=32.47  Aligned_cols=8  Identities=13%  Similarity=0.098  Sum_probs=3.6

Q ss_pred             HHHHHHHH
Q psy904          294 LSVVELLC  301 (596)
Q Consensus       294 ~~iv~~Ll  301 (596)
                      --++.||.
T Consensus        30 e~al~wl~   37 (290)
T KOG2689|consen   30 EQALDWLE   37 (290)
T ss_pred             HHHHHHHH
Confidence            33444553


No 143
>KOG2689|consensus
Probab=77.37  E-value=70  Score=31.07  Aligned_cols=19  Identities=21%  Similarity=0.309  Sum_probs=8.0

Q ss_pred             HHHHHHHcCcHHHHHHHHH
Q psy904          251 ALTIAADKGHCRFVELLLS  269 (596)
Q Consensus       251 ~L~~A~~~~~~~iv~~Ll~  269 (596)
                      +|+.....|.-.++.||..
T Consensus        20 al~~~~n~~~e~al~wl~~   38 (290)
T KOG2689|consen   20 ALAVYGNRGIEQALDWLEM   38 (290)
T ss_pred             HhhhhccccHHHHHHHHHh
Confidence            3333333344445555533


No 144
>PF02029 Caldesmon:  Caldesmon;  InterPro: IPR006018  This group of proteins includes two protein families: caldesmon and lymphocyte specific protein.  Caldesmon (CDM) is an actin- and myosin-binding protein implicated in the regulation of actomyosin interactions in smooth muscle and non-muscle cells, possibly acting as a bridge between myosin and actin filaments []. CDM is believed to be an elongated molecule, with an N-terminal myosin/calmodulin- binding domain and a C-terminal tropomyosin/actin/calmodulin-binding domain, separated by a 40nm-long central helix []. A high-molecular-weight form of CDM is predominantly expressed in smooth muscles, while a low-molecular-weight form is widely distributed in non- muscle tissues and cells (the protein is not expressed in skeletal muscle or heart). 
Probab=76.52  E-value=14  Score=39.54  Aligned_cols=8  Identities=25%  Similarity=0.771  Sum_probs=3.6

Q ss_pred             ccCCcccc
Q psy904          577 WTGRPMWS  584 (596)
Q Consensus       577 ~~~~~~~~  584 (596)
                      |-+.-.|+
T Consensus       427 we~g~v~~  434 (492)
T PF02029_consen  427 WEKGNVFS  434 (492)
T ss_pred             cccCCccc
Confidence            44444444


No 145
>KOG2963|consensus
Probab=73.71  E-value=12  Score=37.37  Aligned_cols=11  Identities=0%  Similarity=-0.127  Sum_probs=5.9

Q ss_pred             HHHHHHHHhCc
Q psy904          327 VKAVRWMVNHV  337 (596)
Q Consensus       327 ~~iv~~Ll~~~  337 (596)
                      -+|..|++..|
T Consensus       228 ~DISd~vl~~g  238 (405)
T KOG2963|consen  228 QDISDLVLKGG  238 (405)
T ss_pred             hhHHHHhcCCc
Confidence            34555555554


No 146
>KOG3654|consensus
Probab=72.93  E-value=18  Score=37.73  Aligned_cols=11  Identities=18%  Similarity=-0.058  Sum_probs=6.1

Q ss_pred             CCCCCCCCccc
Q psy904          537 GIDANSQASCS  547 (596)
Q Consensus       537 ~~~~~~~~~~~  547 (596)
                      -+-+.+.+|||
T Consensus       490 ~~r~~~~s~ls  500 (708)
T KOG3654|consen  490 PKRGGYGSSLS  500 (708)
T ss_pred             cccCCccchhH
Confidence            33445566666


No 147
>PF00769 ERM:  Ezrin/radixin/moesin family;  InterPro: IPR011259 The ERM family consists of three closely-related proteins, ezrin, radixin and moesin []. Ezrin was first identified as a constituent of microvilli [], radixin as a barbed, end-capping actin-modulating protein from isolated junctional fractions [], and moesin as a heparin binding protein []. A tumour suppressor molecule responsible for neurofibromatosis type 2 (NF2) is highly similar to ERM proteins and has been designated merlin (moesin-ezrin-radixin-like protein). ERM molecules contain 3 domains, an N-terminal globular domain; an extended alpha-helical domain; and a charged C-terminal domain []. Ezrin, radixin and merlin also contain a polyproline region between the helical and C-terminal domains. The N-terminal domain is highly conserved, and is also found in merlin, band 4.1 proteins and members of the band 4.1 superfamily. ERM proteins crosslink actin filaments with plasma membranes. They co-localise with CD44 at actin filament-plasma membrane interaction sites, associating with CD44 via their N-terminal domains and with actin filaments via their C-terminal domains [].; GO: 0008092 cytoskeletal protein binding, 0005737 cytoplasm, 0019898 extrinsic to membrane; PDB: 2I1J_A 2I1K_A 1E5W_A 1EF1_C.
Probab=71.25  E-value=1e+02  Score=29.87  Aligned_cols=7  Identities=29%  Similarity=0.392  Sum_probs=2.0

Q ss_pred             chhhhcc
Q psy904          547 SSNEVKT  553 (596)
Q Consensus       547 ~~~~~~~  553 (596)
                      .|.|+.+
T Consensus       159 ~s~dl~~  165 (246)
T PF00769_consen  159 YSADLET  165 (246)
T ss_dssp             EEEE---
T ss_pred             ccccccc
Confidence            4555553


No 148
>KOG3654|consensus
Probab=69.90  E-value=27  Score=36.57  Aligned_cols=8  Identities=50%  Similarity=0.621  Sum_probs=3.2

Q ss_pred             cccccCCc
Q psy904          581 PMWSIEPS  588 (596)
Q Consensus       581 ~~~~~~~~  588 (596)
                      |...-+||
T Consensus       569 Pkl~keps  576 (708)
T KOG3654|consen  569 PKLYKEPS  576 (708)
T ss_pred             cchhcChh
Confidence            33333444


No 149
>KOG2963|consensus
Probab=61.89  E-value=31  Score=34.53  Aligned_cols=11  Identities=27%  Similarity=0.498  Sum_probs=5.8

Q ss_pred             HHHHHHHHHCC
Q psy904          294 LSVVELLCKHG  304 (596)
Q Consensus       294 ~~iv~~Ll~~g  304 (596)
                      -+|..|++..|
T Consensus       228 ~DISd~vl~~g  238 (405)
T KOG2963|consen  228 QDISDLVLKGG  238 (405)
T ss_pred             hhHHHHhcCCc
Confidence            35555555544


No 150
>PF14387 DUF4418:  Domain of unknown function (DUF4418)
Probab=61.20  E-value=2.6  Score=36.00  Aligned_cols=15  Identities=33%  Similarity=0.691  Sum_probs=11.8

Q ss_pred             hccCccccccccCCc
Q psy904          567 KLDMRWFPCYWTGRP  581 (596)
Q Consensus       567 ~~~~~~~~~~~~~~~  581 (596)
                      +.|..|.+|||||+-
T Consensus        26 ~~~g~~M~Ch~tg~a   40 (124)
T PF14387_consen   26 MPDGGHMKCHWTGQA   40 (124)
T ss_pred             CCCCCeeeehhHHHH
Confidence            356679999999973


No 151
>PF04053 Coatomer_WDAD:  Coatomer WD associated region ;  InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits.  This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=58.59  E-value=14  Score=39.31  Aligned_cols=105  Identities=18%  Similarity=0.067  Sum_probs=43.7

Q ss_pred             cHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccCCCChHHHHHHhcCcHH
Q psy904          148 SPLMLAAMNGHTAAVKLLLDMGSDINAQIETNRNTALTLACFQGRHEVVSLLLDRKANVEHRAKTGLTPLMEAASGGYVE  227 (596)
Q Consensus       148 t~L~~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~  227 (596)
                      +-+.+|+..|+++...-+.....+....     ...-..|...|+.+++...+.+..+..       ..+.+....|+.+
T Consensus       323 ~rFeLAl~lg~L~~A~~~a~~~~~~~~W-----~~Lg~~AL~~g~~~lAe~c~~k~~d~~-------~L~lLy~~~g~~~  390 (443)
T PF04053_consen  323 HRFELALQLGNLDIALEIAKELDDPEKW-----KQLGDEALRQGNIELAEECYQKAKDFS-------GLLLLYSSTGDRE  390 (443)
T ss_dssp             HHHHHHHHCT-HHHHHHHCCCCSTHHHH-----HHHHHHHHHTTBHHHHHHHHHHCT-HH-------HHHHHHHHCT-HH
T ss_pred             HHhHHHHhcCCHHHHHHHHHhcCcHHHH-----HHHHHHHHHcCCHHHHHHHHHhhcCcc-------ccHHHHHHhCCHH
Confidence            3455555555555544443322211110     123334555566666666555443332       2334444455555


Q ss_pred             HHHHHHhCCCCCCCCCCCCCCCcHHHHHHHcCcHH-HHHHHHHC
Q psy904          228 VGRVLLDKGADVNAPPVPSSRDTALTIAADKGHCR-FVELLLSK  270 (596)
Q Consensus       228 iv~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~-iv~~Ll~~  270 (596)
                      -++.|.....      .....+.+++.+...|+.+ ++++|++.
T Consensus       391 ~L~kl~~~a~------~~~~~n~af~~~~~lgd~~~cv~lL~~~  428 (443)
T PF04053_consen  391 KLSKLAKIAE------ERGDINIAFQAALLLGDVEECVDLLIET  428 (443)
T ss_dssp             HHHHHHHHHH------HTT-HHHHHHHHHHHT-HHHHHHHHHHT
T ss_pred             HHHHHHHHHH------HccCHHHHHHHHHHcCCHHHHHHHHHHc
Confidence            5544443210      0112234455555555543 55555554


No 152
>KOG4055|consensus
Probab=48.27  E-value=2.1e+02  Score=25.91  Aligned_cols=8  Identities=38%  Similarity=0.393  Sum_probs=3.3

Q ss_pred             CCccchhh
Q psy904          543 QASCSSNE  550 (596)
Q Consensus       543 ~~~~~~~~  550 (596)
                      |.|+++++
T Consensus       174 q~s~ke~e  181 (213)
T KOG4055|consen  174 QESSKETE  181 (213)
T ss_pred             hccccccc
Confidence            44444443


No 153
>KOG2253|consensus
Probab=47.48  E-value=2.6e+02  Score=30.90  Aligned_cols=13  Identities=31%  Similarity=0.675  Sum_probs=5.2

Q ss_pred             HHHHHHHHHHHHH
Q psy904          468 AAQARKRERKKQK  480 (596)
Q Consensus       468 ~~~~~~~~~~~~~  480 (596)
                      .+++-++.+.+++
T Consensus       349 e~Ead~~dR~qeq  361 (668)
T KOG2253|consen  349 EAEADRRDRHQEQ  361 (668)
T ss_pred             HhhhhhhHHHHHH
Confidence            3344444444333


No 154
>KOG3614|consensus
Probab=47.25  E-value=39  Score=40.09  Aligned_cols=56  Identities=20%  Similarity=0.211  Sum_probs=37.7

Q ss_pred             HHHHHHHcCCHHHHHH-HHhCCCCccccccCCCChHHHHHHHCCcHHHHHHHHhCCCCcc
Q psy904           47 PLILAATAGHDKVVDI-LLNHKADMEAQSERTKDTPLSLACSGGRYEVVELLLTRGANKE  105 (596)
Q Consensus        47 ~L~~A~~~g~~eiv~~-Ll~~~~~~~~~~~~~~~t~L~~A~~~g~~eivk~LL~~g~~~~  105 (596)
                      -|..|...++.|+.+- ++..|......   .-..++.-|.....++.|++|+++|.+..
T Consensus       396 qL~LalaWnRvDIA~seIF~~~~~W~s~---~Le~aM~dALv~DR~dFV~LLlEnGv~m~  452 (1381)
T KOG3614|consen  396 QLKLALAWNRVDIARSEIFLNGAKWKSP---DLESAMDDALVLDRPDFVRLLLENGVSMQ  452 (1381)
T ss_pred             HHHHHHHhhhhhHHHHHHhccCccCCch---HHHHHHHHHHHhCcHHHHHHHHHcCcchh
Confidence            4777777788877764 33444443322   23356777888888999999999888753


No 155
>PF04053 Coatomer_WDAD:  Coatomer WD associated region ;  InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits.  This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=46.85  E-value=38  Score=36.10  Aligned_cols=161  Identities=16%  Similarity=0.049  Sum_probs=75.3

Q ss_pred             HHHHHHcCCHHHHHHHHhCCCCccccccCCCChHHHHHHHCCcHHHHHHHHhCCCCccCCCCCCCcHHHHHHhcCCHHHH
Q psy904           48 LILAATAGHDKVVDILLNHKADMEAQSERTKDTPLSLACSGGRYEVVELLLTRGANKEHRNVSDYTPLSLAASGGYVNII  127 (596)
Q Consensus        48 L~~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~~~g~~eivk~LL~~g~~~~~~d~~g~t~L~~A~~~g~~eiv  127 (596)
                      +..|+..++++-+..++....-+...+...+...+.+.-..|..++.-.+..          +-.+-+.+|+..|+++..
T Consensus       268 fk~av~~~d~~~v~~~i~~~~ll~~i~~~~~~~i~~fL~~~G~~e~AL~~~~----------D~~~rFeLAl~lg~L~~A  337 (443)
T PF04053_consen  268 FKTAVLRGDFEEVLRMIAASNLLPNIPKDQGQSIARFLEKKGYPELALQFVT----------DPDHRFELALQLGNLDIA  337 (443)
T ss_dssp             HHHHHHTT-HHH-----HHHHTGGG--HHHHHHHHHHHHHTT-HHHHHHHSS-----------HHHHHHHHHHCT-HHHH
T ss_pred             HHHHHHcCChhhhhhhhhhhhhcccCChhHHHHHHHHHHHCCCHHHHHhhcC----------ChHHHhHHHHhcCCHHHH
Confidence            4567777777665444432211111112223444555555555555444421          123556677777777766


Q ss_pred             HHHHhCCCCccccCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHhcCCCcc
Q psy904          128 KLLLTHGAEINSRTGSKLGISPLMLAAMNGHTAAVKLLLDMGSDINAQIETNRNTALTLACFQGRHEVVSLLLDRKANVE  207 (596)
Q Consensus       128 ~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~g~~~~  207 (596)
                      .-+.....+...      -...-..|...|+++++...+.+..+..        ..+.+....|+.+-++.|......  
T Consensus       338 ~~~a~~~~~~~~------W~~Lg~~AL~~g~~~lAe~c~~k~~d~~--------~L~lLy~~~g~~~~L~kl~~~a~~--  401 (443)
T PF04053_consen  338 LEIAKELDDPEK------WKQLGDEALRQGNIELAEECYQKAKDFS--------GLLLLYSSTGDREKLSKLAKIAEE--  401 (443)
T ss_dssp             HHHCCCCSTHHH------HHHHHHHHHHTTBHHHHHHHHHHCT-HH--------HHHHHHHHCT-HHHHHHHHHHHHH--
T ss_pred             HHHHHhcCcHHH------HHHHHHHHHHcCCHHHHHHHHHhhcCcc--------ccHHHHHHhCCHHHHHHHHHHHHH--
Confidence            665543221110      0122334666778887777777655432        455666677777777766542110  


Q ss_pred             cccCCCChHHHHHHhcCcH-HHHHHHHhCC
Q psy904          208 HRAKTGLTPLMEAASGGYV-EVGRVLLDKG  236 (596)
Q Consensus       208 ~~~~~g~t~L~~A~~~g~~-~iv~~Ll~~g  236 (596)
                        ......+++.+...|+. +++..|++.|
T Consensus       402 --~~~~n~af~~~~~lgd~~~cv~lL~~~~  429 (443)
T PF04053_consen  402 --RGDINIAFQAALLLGDVEECVDLLIETG  429 (443)
T ss_dssp             --TT-HHHHHHHHHHHT-HHHHHHHHHHTT
T ss_pred             --ccCHHHHHHHHHHcCCHHHHHHHHHHcC
Confidence              01112345555555554 4666666554


No 156
>COG4499 Predicted membrane protein [Function unknown]
Probab=45.98  E-value=46  Score=33.96  Aligned_cols=6  Identities=50%  Similarity=0.711  Sum_probs=2.2

Q ss_pred             HHHcCC
Q psy904          153 AAMNGH  158 (596)
Q Consensus       153 A~~~g~  158 (596)
                      ++.+|.
T Consensus       154 ~~fn~k  159 (434)
T COG4499         154 YAFNGK  159 (434)
T ss_pred             HHHcCC
Confidence            333333


No 157
>KOG2894|consensus
Probab=44.07  E-value=2.8e+02  Score=27.06  Aligned_cols=6  Identities=17%  Similarity=0.434  Sum_probs=2.2

Q ss_pred             HHHHHH
Q psy904          439 NQQAER  444 (596)
Q Consensus       439 ~~~~~~  444 (596)
                      +.++.+
T Consensus        71 Dmk~kq   76 (331)
T KOG2894|consen   71 DMKAKQ   76 (331)
T ss_pred             HHHHHH
Confidence            333333


No 158
>KOG0345|consensus
Probab=42.50  E-value=87  Score=33.11  Aligned_cols=10  Identities=30%  Similarity=0.079  Sum_probs=4.3

Q ss_pred             CcHHHHHHHc
Q psy904          181 NTALTLACFQ  190 (596)
Q Consensus       181 ~t~L~~A~~~  190 (596)
                      .|-|+.|.+.
T Consensus       190 RTGLFSATq~  199 (567)
T KOG0345|consen  190 RTGLFSATQT  199 (567)
T ss_pred             ccccccchhh
Confidence            3444444433


No 159
>PF03622 IBV_3B:  IBV 3B protein ;  InterPro: IPR005295 These proteins are the product of ORF 3B from Infectious bronchitis virus). Currently, the function of this protein remains unknown [].
Probab=42.17  E-value=9.5  Score=27.22  Aligned_cols=15  Identities=40%  Similarity=1.165  Sum_probs=12.6

Q ss_pred             cccccCCcccccCCc
Q psy904          574 PCYWTGRPMWSIEPS  588 (596)
Q Consensus       574 ~~~~~~~~~~~~~~~  588 (596)
                      -|||.|.-.|-||.+
T Consensus        39 ~cyyrgGsfwEieSa   53 (64)
T PF03622_consen   39 VCYYRGGSFWEIESA   53 (64)
T ss_pred             EEEEecCcEEEeecc
Confidence            499999999998864


No 160
>PF07846 Metallothio_Cad:  Metallothionein family;  InterPro: IPR012484 The sequence making up family 7 of the metallothionein superfamily are found repeated in metallothionein proteins expressed by two Tetrahymena species. Metallothioneins are low molecular mass, cysteine-rich metal-binding proteins that are thought to be involved in the regulation of levels of trace metals, and detoxification of these metals when present in excess []. Some of the metallothioneins found in this family (for example, Q8T6B3 from SWISSPROT) are known to be induced by cadmium and are thought to be involved in the cellular sequestration of toxic metal ions. The high proportion of cysteine residues allows the metal ions to be bound by the formation of clusters of metal-thiolate complexes []. Tetrahymena spp. metallothioneins differ from other eukaryotic metallothioneins mainly in the length of their sequences and in the cysteine-containing motifs they exhibit. ; GO: 0046870 cadmium ion binding
Probab=41.05  E-value=15  Score=20.06  Aligned_cols=12  Identities=33%  Similarity=0.517  Sum_probs=9.8

Q ss_pred             CCCCCCCCCccc
Q psy904          536 SGIDANSQASCS  547 (596)
Q Consensus       536 ~~~~~~~~~~~~  547 (596)
                      +-+|+||+-+||
T Consensus        10 cC~DPnsG~~C~   21 (21)
T PF07846_consen   10 CCTDPNSGCCCV   21 (21)
T ss_pred             cccCCCCccccC
Confidence            557899998886


No 161
>KOG0292|consensus
Probab=40.66  E-value=36  Score=38.53  Aligned_cols=99  Identities=18%  Similarity=0.185  Sum_probs=47.9

Q ss_pred             HHHHHHCCcHHHHHHHHhCCCCccCCCCCCCcHHHHHHhcCCHHHHHHHHhCCCCccccCCCCCCCcHHHHHHHcCCHHH
Q psy904           82 LSLACSGGRYEVVELLLTRGANKEHRNVSDYTPLSLAASGGYVNIIKLLLTHGAEINSRTGSKLGISPLMLAAMNGHTAA  161 (596)
Q Consensus        82 L~~A~~~g~~eivk~LL~~g~~~~~~d~~g~t~L~~A~~~g~~eiv~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~g~~ei  161 (596)
                      +..|..+.+++-|--|+..+      +.-|..+|.|....|..++.-.++.-            ..|-+.+|...|++++
T Consensus       600 FKlALi~k~ydeVl~lI~ns------~LvGqaiIaYLqKkgypeiAL~FVkD------------~~tRF~LaLe~gnle~  661 (1202)
T KOG0292|consen  600 FKLALLNKKYDEVLHLIKNS------NLVGQAIIAYLQKKGYPEIALHFVKD------------ERTRFELALECGNLEV  661 (1202)
T ss_pred             HHHHHHhhhhHHHHHHHHhc------CcccHHHHHHHHhcCCcceeeeeecC------------cchheeeehhcCCHHH
Confidence            34555555555444444432      12345555555555544443322211            3345556666666665


Q ss_pred             HHHHHhcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHhcC
Q psy904          162 VKLLLDMGSDINAQIETNRNTALTLACFQGRHEVVSLLLDRK  203 (596)
Q Consensus       162 v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~g  203 (596)
                      .--......+.+..     ...-..|...|+..++++.++.-
T Consensus       662 ale~akkldd~d~w-----~rLge~Al~qgn~~IaEm~yQ~~  698 (1202)
T KOG0292|consen  662 ALEAAKKLDDKDVW-----ERLGEEALRQGNHQIAEMCYQRT  698 (1202)
T ss_pred             HHHHHHhcCcHHHH-----HHHHHHHHHhcchHHHHHHHHHh
Confidence            54444333332221     12334456667777777766643


No 162
>smart00816 Amb_V_allergen Amb V Allergen. Amb V is an Ambrosia sp (ragweed) pollen allergen. Amb t V has been shown to contain a C-terminal helix as the major T cell epitope. Free sulphhydryl groups also play a major role in the T cell recognition of cross-reactivity T cell epitopes within these related allergens.
Probab=39.92  E-value=10  Score=24.71  Aligned_cols=8  Identities=50%  Similarity=1.373  Sum_probs=6.7

Q ss_pred             ccccccCC
Q psy904          573 FPCYWTGR  580 (596)
Q Consensus       573 ~~~~~~~~  580 (596)
                      .||||.|.
T Consensus         3 ~~Cy~aG~   10 (45)
T smart00816        3 GLCYWAGT   10 (45)
T ss_pred             cchhcccc
Confidence            58999985


No 163
>cd02899 PLAT_SR Scavenger receptor protein. A subfamily of PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology 2)  domain.  It consists of an eight stranded beta-barrel. The domain can be found in various domain architectures, in case of lipoxygenases, alpha toxin, lipases and polycystin, but also as a single domain or as repeats.The putative function of this domain is to facilitate access to sequestered membrane or micelle bound substrates. This subfamily contains Toxoplasma gondii Scavenger protein TgSR1.
Probab=39.69  E-value=10  Score=31.57  Aligned_cols=13  Identities=31%  Similarity=0.631  Sum_probs=10.2

Q ss_pred             Ccccccc-ccCCcc
Q psy904          570 MRWFPCY-WTGRPM  582 (596)
Q Consensus       570 ~~~~~~~-~~~~~~  582 (596)
                      +-+|||| |-++|.
T Consensus        87 ~~~Fpc~rWla~~~  100 (109)
T cd02899          87 VFAFNVKRWIGYPY  100 (109)
T ss_pred             EEEEEcceeeCCch
Confidence            3459998 999885


No 164
>KOG2507|consensus
Probab=39.37  E-value=43  Score=34.52  Aligned_cols=11  Identities=45%  Similarity=0.903  Sum_probs=4.3

Q ss_pred             hhhhccCcccc
Q psy904          564 KKKKLDMRWFP  574 (596)
Q Consensus       564 ~~~~~~~~~~~  574 (596)
                      +|+=++-+-||
T Consensus       372 ~KtllEl~L~p  382 (506)
T KOG2507|consen  372 DKTLLELRLFP  382 (506)
T ss_pred             hhhHHHhccCC
Confidence            33333344443


No 165
>KOG4709|consensus
Probab=38.90  E-value=2e+02  Score=26.41  Aligned_cols=8  Identities=38%  Similarity=0.223  Sum_probs=3.5

Q ss_pred             ccchhhhc
Q psy904          545 SCSSNEVK  552 (596)
Q Consensus       545 ~~~~~~~~  552 (596)
                      |.||-+++
T Consensus       169 si~~at~~  176 (217)
T KOG4709|consen  169 SISSATAS  176 (217)
T ss_pred             ccCCcccc
Confidence            34444444


No 166
>PF03913 Amb_V_allergen:  Amb V Allergen;  InterPro: IPR005611  Amb V is an Ambrosia sp (ragweed) pollen allergen. Amb t V has been shown to contain a C-terminal helix as the major T cell epitope. Free sulphydryl groups also play a major role in the T cell recognition of cross-reactivity T cell epitopes within these related allergens [].; PDB: 2BBG_A 3BBG_A 1BBG_A.
Probab=38.14  E-value=11  Score=24.44  Aligned_cols=8  Identities=63%  Similarity=2.087  Sum_probs=3.8

Q ss_pred             ccccccCC
Q psy904          573 FPCYWTGR  580 (596)
Q Consensus       573 ~~~~~~~~  580 (596)
                      .||||.|.
T Consensus         2 ~~Cy~aG~    9 (44)
T PF03913_consen    2 MPCYWAGN    9 (44)
T ss_dssp             S--E-ESS
T ss_pred             cccccccc
Confidence            58999985


No 167
>KOG0513|consensus
Probab=37.97  E-value=2.3  Score=45.54  Aligned_cols=15  Identities=20%  Similarity=0.206  Sum_probs=7.4

Q ss_pred             CCCcHHHHHHHcCcH
Q psy904          247 SRDTALTIAADKGHC  261 (596)
Q Consensus       247 ~g~t~L~~A~~~~~~  261 (596)
                      .|+|+||.+...++.
T Consensus       168 ~g~t~L~~tl~~~~~  182 (503)
T KOG0513|consen  168 LGNTKLHLTLTKENL  182 (503)
T ss_pred             cCCceeeeeccCCCc
Confidence            445555555544444


No 168
>KOG4709|consensus
Probab=36.76  E-value=1.9e+02  Score=26.50  Aligned_cols=8  Identities=88%  Similarity=1.016  Sum_probs=3.4

Q ss_pred             hhhhhhhh
Q psy904          560 RKDKKKKK  567 (596)
Q Consensus       560 ~~~~~~~~  567 (596)
                      +|.++||+
T Consensus       182 rk~k~kKk  189 (217)
T KOG4709|consen  182 RKKKKKKK  189 (217)
T ss_pred             cchhhhcc
Confidence            34444444


No 169
>KOG3039|consensus
Probab=36.19  E-value=1.6e+02  Score=28.12  Aligned_cols=11  Identities=45%  Similarity=0.815  Sum_probs=5.5

Q ss_pred             hhhhccCcccc
Q psy904          564 KKKKLDMRWFP  574 (596)
Q Consensus       564 ~~~~~~~~~~~  574 (596)
                      |-|...+-|+|
T Consensus       156 ~~k~lpsFWlP  166 (303)
T KOG3039|consen  156 KLKTLPSFWLP  166 (303)
T ss_pred             ccccccceecC
Confidence            33445555555


No 170
>KOG0345|consensus
Probab=35.17  E-value=1.2e+02  Score=32.09  Aligned_cols=9  Identities=33%  Similarity=0.209  Sum_probs=3.8

Q ss_pred             cccCCCCCc
Q psy904           38 EHRDKKGFT   46 (596)
Q Consensus        38 ~~~d~~g~t   46 (596)
                      ...+..|.|
T Consensus        49 eavTGSGKT   57 (567)
T KOG0345|consen   49 EAVTGSGKT   57 (567)
T ss_pred             EcCCCCCch
Confidence            334444444


No 171
>PF01671 ASFV_360:  African swine fever virus multigene family 360 protein;  InterPro: IPR002595 The multigene family 360 protein are found within the African swine fever virus (ASFV) genome which consist of dsDNA and has similar structural features to the poxviruses []. The biological function of this family is not known [], although Q65137 from SWISSPROT is a major structural protein [].; GO: 0042330 taxis
Probab=32.20  E-value=1.7e+02  Score=27.30  Aligned_cols=122  Identities=16%  Similarity=0.114  Sum_probs=61.9

Q ss_pred             HHHHCCcHHHHHHHHhCCCCccCCCCCCCcHHHHHHhcCCHHHHHHHHhC-CCCccccCCCCCCCcHHHHHHHc-CCHHH
Q psy904           84 LACSGGRYEVVELLLTRGANKEHRNVSDYTPLSLAASGGYVNIIKLLLTH-GAEINSRTGSKLGISPLMLAAMN-GHTAA  161 (596)
Q Consensus        84 ~A~~~g~~eivk~LL~~g~~~~~~d~~g~t~L~~A~~~g~~eiv~~Ll~~-g~~~~~~~~~~~g~t~L~~A~~~-g~~ei  161 (596)
                      .|+..+=.+.++++-++-...+      .--|.+|...+++.-+-.+... ...++..       .-+.+||.. ++.-.
T Consensus        91 ~Av~ynL~~AI~Yfyq~y~hl~------~WRL~CaL~fNnvfdlHe~y~~eki~mdin-------eMM~lAC~~d~N~lt  157 (215)
T PF01671_consen   91 IAVQYNLKEAIQYFYQKYPHLN------DWRLICALYFNNVFDLHEIYNKEKIRMDIN-------EMMRLACMYDNNFLT  157 (215)
T ss_pred             HHHHhhhHHHHHHHHHhccchh------hHHHHHHHHhCCHHHHHHHHHHhhcCCCHH-------HHHHHHHcCCCCchH
Confidence            4566666667777766533221      1235555555555444433321 1111111       234455543 34555


Q ss_pred             HHHHHhcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccCCCChHHHHHHhcCcHHHHHHH
Q psy904          162 VKLLLDMGSDINAQIETNRNTALTLACFQGRHEVVSLLLDRKANVEHRAKTGLTPLMEAASGGYVEVGRVL  232 (596)
Q Consensus       162 v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~L  232 (596)
                      +=|..-.|++++        .++..++.+.+..-+-+.++.|+++..      -....|...++..++..|
T Consensus       158 IYYCf~LGAdIN--------~AM~~si~~~n~~N~fFCIDLGAnafe------e~~~lA~q~~~~~i~~iL  214 (215)
T PF01671_consen  158 IYYCFALGADIN--------QAMLTSIQNYNIGNMFFCIDLGANAFE------EAKALAEQKNYYNISNIL  214 (215)
T ss_pred             HHHHHHhcccHH--------HHHHHHHHhcccccEEeeeccCCChHH------HHHHHHHHhcHHHHHHHh
Confidence            555556666654        455666666666555566666666543      345566666555554443


No 172
>PF09292 Neil1-DNA_bind:  Endonuclease VIII-like 1, DNA bind;  InterPro: IPR015371 This domain is predominantly found in Endonuclease VIII-like 1 proteins and adopts a glucocorticoid receptor-like fold. Structural analysis reveals a zincless finger motif that is required for glycosylase activity []. ; PDB: 1TDH_A.
Probab=31.99  E-value=15  Score=23.62  Aligned_cols=14  Identities=43%  Similarity=1.360  Sum_probs=8.9

Q ss_pred             ccccccc----------cCCcccc
Q psy904          571 RWFPCYW----------TGRPMWS  584 (596)
Q Consensus       571 ~~~~~~~----------~~~~~~~  584 (596)
                      .|.-||-          .||-||-
T Consensus         7 ~WLqCY~v~gM~sl~D~~gRTiWF   30 (39)
T PF09292_consen    7 AWLQCYSVPGMKSLRDRNGRTIWF   30 (39)
T ss_dssp             HH-SSTT-TT-EEEE-TTS-EEEE
T ss_pred             HHHHHhcccccccccccCCCEEEe
Confidence            4899997          4777774


No 173
>KOG0343|consensus
Probab=30.97  E-value=67  Score=34.65  Aligned_cols=52  Identities=31%  Similarity=0.413  Sum_probs=0.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Q psy904          456 LDMEKWREESKRAAQARKRERKKQKKLEKKEEKRKAMEEEEEEEEEVEVQEV  507 (596)
Q Consensus       456 ~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~~~~~~~~~  507 (596)
                      ....++-++.-+...++-+++++++++++.+.+|+..||...++-+...+++
T Consensus       639 ~k~~a~l~~~D~~DK~~~kek~~ek~r~k~~k~rr~aeea~~~e~e~~e~d~  690 (758)
T KOG0343|consen  639 EKAKAELKEEDKEDKKRFKEKRKEKRREKLEKERRRAEEANEEEAEAEEEDG  690 (758)
T ss_pred             HHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchhccC


No 174
>KOG2253|consensus
Probab=30.74  E-value=7.9e+02  Score=27.35  Aligned_cols=11  Identities=27%  Similarity=0.428  Sum_probs=4.3

Q ss_pred             hhhhhHHHHHH
Q psy904          362 CQECSMVIRVA  372 (596)
Q Consensus       362 ~~~~~~~i~~~  372 (596)
                      |..-+......
T Consensus       232 ~rd~sr~~~r~  242 (668)
T KOG2253|consen  232 CRDRSRFDRRS  242 (668)
T ss_pred             chhhccchhhh
Confidence            44444333333


No 175
>PRK14474 F0F1 ATP synthase subunit B; Provisional
Probab=29.99  E-value=5.2e+02  Score=25.08  Aligned_cols=8  Identities=13%  Similarity=0.169  Sum_probs=3.5

Q ss_pred             hhhcccCC
Q psy904          549 NEVKTAAP  556 (596)
Q Consensus       549 ~~~~~~~~  556 (596)
                      -.|-|+-|
T Consensus       178 ~~i~ta~~  185 (250)
T PRK14474        178 LRIRTSFE  185 (250)
T ss_pred             eEEEeCCC
Confidence            44444434


No 176
>PF12518 DUF3721:  Protein of unknown function;  InterPro: IPR022196  This domain family is found in bacteria and eukaryotes, and is approximately 30 amino acids in length. There is a conserved WMPC sequence motif. There are two completely conserved residues (A and C) that may be functionally important. 
Probab=29.49  E-value=23  Score=22.54  Aligned_cols=8  Identities=38%  Similarity=1.560  Sum_probs=5.5

Q ss_pred             ccCccccc
Q psy904          568 LDMRWFPC  575 (596)
Q Consensus       568 ~~~~~~~~  575 (596)
                      ...+|.||
T Consensus        22 mg~~WMPC   29 (34)
T PF12518_consen   22 MGDKWMPC   29 (34)
T ss_pred             ccCccccC
Confidence            45677777


No 177
>KOG0112|consensus
Probab=29.21  E-value=89  Score=35.59  Aligned_cols=21  Identities=38%  Similarity=0.405  Sum_probs=13.5

Q ss_pred             CCCCCCCCCCCCCccchhhhc
Q psy904          532 EEGDSGIDANSQASCSSNEVK  552 (596)
Q Consensus       532 ~~~~~~~~~~~~~~~~~~~~~  552 (596)
                      +.+.+|-.+||+.--||.+.|
T Consensus       868 ~~~~~~~~g~s~~~~~s~s~k  888 (975)
T KOG0112|consen  868 EAGKDGDAGNSGNGGSSDSEK  888 (975)
T ss_pred             hcCCcccccccCCCCcccccC
Confidence            455566666777666666666


No 178
>KOG2007|consensus
Probab=28.81  E-value=26  Score=37.02  Aligned_cols=17  Identities=41%  Similarity=0.886  Sum_probs=8.5

Q ss_pred             Cccccccc-cCCcccccC
Q psy904          570 MRWFPCYW-TGRPMWSIE  586 (596)
Q Consensus       570 ~~~~~~~~-~~~~~~~~~  586 (596)
                      --|++|=| .|||-|.||
T Consensus       229 EP~WeSPWG~GRPGWHIE  246 (586)
T KOG2007|consen  229 EPSWESPWGKGRPGWHIE  246 (586)
T ss_pred             CCCCCCCCCCCCCCceee
Confidence            34445555 255555555


No 179
>PF01671 ASFV_360:  African swine fever virus multigene family 360 protein;  InterPro: IPR002595 The multigene family 360 protein are found within the African swine fever virus (ASFV) genome which consist of dsDNA and has similar structural features to the poxviruses []. The biological function of this family is not known [], although Q65137 from SWISSPROT is a major structural protein [].; GO: 0042330 taxis
Probab=28.67  E-value=2e+02  Score=26.88  Aligned_cols=100  Identities=13%  Similarity=0.161  Sum_probs=47.5

Q ss_pred             HHHhcCCHHHHHHHHhCCCCccccCCCCCCCcHHHHHHHcCCHHHHHHHHhc-CCCcccccccCCCcHHHHHHHc-CCHH
Q psy904          117 LAASGGYVNIIKLLLTHGAEINSRTGSKLGISPLMLAAMNGHTAAVKLLLDM-GSDINAQIETNRNTALTLACFQ-GRHE  194 (596)
Q Consensus       117 ~A~~~g~~eiv~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~g~~eiv~~Ll~~-~~~~~~~~~~~~~t~L~~A~~~-~~~~  194 (596)
                      .|+..+-.+.++++.++.+.++.        --|..|...+++.-+.-+... ....      +-+..+.+||.. ++.-
T Consensus        91 ~Av~ynL~~AI~Yfyq~y~hl~~--------WRL~CaL~fNnvfdlHe~y~~eki~m------dineMM~lAC~~d~N~l  156 (215)
T PF01671_consen   91 IAVQYNLKEAIQYFYQKYPHLND--------WRLICALYFNNVFDLHEIYNKEKIRM------DINEMMRLACMYDNNFL  156 (215)
T ss_pred             HHHHhhhHHHHHHHHHhccchhh--------HHHHHHHHhCCHHHHHHHHHHhhcCC------CHHHHHHHHHcCCCCch
Confidence            45666666667777666544321        234555555555433333321 1111      112345556643 3445


Q ss_pred             HHHHHHhcCCCcccccCCCChHHHHHHhcCcHHHHHHHHhCCC
Q psy904          195 VVSLLLDRKANVEHRAKTGLTPLMEAASGGYVEVGRVLLDKGA  237 (596)
Q Consensus       195 ii~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~  237 (596)
                      .+-+..-.|+++|       .++...+...+..-+=+-++.|+
T Consensus       157 tIYYCf~LGAdIN-------~AM~~si~~~n~~N~fFCIDLGA  192 (215)
T PF01671_consen  157 TIYYCFALGADIN-------QAMLTSIQNYNIGNMFFCIDLGA  192 (215)
T ss_pred             HHHHHHHhcccHH-------HHHHHHHHhcccccEEeeeccCC
Confidence            5555556666665       34555555444333333333343


No 180
>TIGR03321 alt_F1F0_F0_B alternate F1F0 ATPase, F0 subunit B. CC and in principle may run in either direction. This model represents the F0 subunit B of this apparent second ATP synthase.
Probab=27.63  E-value=5.7e+02  Score=24.70  Aligned_cols=40  Identities=13%  Similarity=0.045  Sum_probs=18.1

Q ss_pred             chhhhcccCCcchhhhhhhhhccCccccccccCCcccccCCc
Q psy904          547 SSNEVKTAAPNSRRKDKKKKKLDMRWFPCYWTGRPMWSIEPS  588 (596)
Q Consensus       547 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  588 (596)
                      +.-.|-||-|-++.-.++=+..=...|++  +-...|.+.|+
T Consensus       177 ~~~~v~sa~~l~~~~~~~i~~~l~~~~~~--~v~~~~~vdp~  216 (246)
T TIGR03321       177 NPVLVRSAFELPEEQREQIRDTIRETLGP--EIRLRFQTEPD  216 (246)
T ss_pred             CceEEEecCCCCHHHHHHHHHHHHHHHCC--CeeEEeeeCch
Confidence            44667776664433222222222223332  33455666665


No 181
>KOG3614|consensus
Probab=27.56  E-value=2.1e+02  Score=34.40  Aligned_cols=27  Identities=19%  Similarity=0.187  Sum_probs=23.2

Q ss_pred             CcHHHHHHHcCCHHHHHHHHhCCCCcc
Q psy904           45 FTPLILAATAGHDKVVDILLNHKADME   71 (596)
Q Consensus        45 ~t~L~~A~~~g~~eiv~~Ll~~~~~~~   71 (596)
                      ..++.-|...+..+.|++|+++|.+..
T Consensus       426 e~aM~dALv~DR~dFV~LLlEnGv~m~  452 (1381)
T KOG3614|consen  426 ESAMDDALVLDRPDFVRLLLENGVSMQ  452 (1381)
T ss_pred             HHHHHHHHHhCcHHHHHHHHHcCcchh
Confidence            356788999999999999999998764


No 182
>KOG3915|consensus
Probab=27.04  E-value=4.3e+02  Score=27.84  Aligned_cols=8  Identities=25%  Similarity=0.360  Sum_probs=3.1

Q ss_pred             CCCCCCCC
Q psy904          532 EEGDSGID  539 (596)
Q Consensus       532 ~~~~~~~~  539 (596)
                      |-+++|-.
T Consensus       614 e~~nng~~  621 (641)
T KOG3915|consen  614 EADNNGGR  621 (641)
T ss_pred             eeccCCCC
Confidence            33434333


No 183
>KOG3039|consensus
Probab=26.83  E-value=1.8e+02  Score=27.82  Aligned_cols=12  Identities=17%  Similarity=0.761  Sum_probs=7.8

Q ss_pred             hccCcccccccc
Q psy904          567 KLDMRWFPCYWT  578 (596)
Q Consensus       567 ~~~~~~~~~~~~  578 (596)
                      +...+-+|-||-
T Consensus       154 ~d~~k~lpsFWl  165 (303)
T KOG3039|consen  154 EDKLKTLPSFWL  165 (303)
T ss_pred             ccccccccceec
Confidence            455566777774


No 184
>KOG0292|consensus
Probab=26.75  E-value=2e+02  Score=32.95  Aligned_cols=136  Identities=13%  Similarity=0.084  Sum_probs=80.6

Q ss_pred             cHHHHHHhcCcHHHHHHHHHC-------CCCccccCCCCC----------cHHHHHHHcCCHHHHHHHHhCCCCcccccc
Q psy904           13 TALTLACAGGHEELVELLLSR-------GADIEHRDKKGF----------TPLILAATAGHDKVVDILLNHKADMEAQSE   75 (596)
Q Consensus        13 t~L~~A~~~g~~~ivk~Ll~~-------g~~i~~~d~~g~----------t~L~~A~~~g~~eiv~~Ll~~~~~~~~~~~   75 (596)
                      ..|.||..+|+--|++.|=..       |-.+-..|.++.          .-+..|..+.+++-|-.|+.++.       
T Consensus       548 nHikYal~~GD~GIikTLd~~iyitkv~gn~V~cl~rd~~~~~~~IDptEy~FKlALi~k~ydeVl~lI~ns~-------  620 (1202)
T KOG0292|consen  548 NHIKYALENGDSGIIKTLDKPIYITKVKGNKVFCLNRDGEIECLTIDPTEYRFKLALLNKKYDEVLHLIKNSN-------  620 (1202)
T ss_pred             hhhhhhhccCCcceEEecccceEEEEeeCCEEEEEecCCCeEEEeechHHHHHHHHHHhhhhHHHHHHHHhcC-------
Confidence            567788888888777776321       222222232222          13677888877776666666542       


Q ss_pred             CCCChHHHHHHHCCcHHHHHHHHhCCCCccCCCCCCCcHHHHHHhcCCHHHHHHHHhCCCCccccCCCCCCCcHHHHHHH
Q psy904           76 RTKDTPLSLACSGGRYEVVELLLTRGANKEHRNVSDYTPLSLAASGGYVNIIKLLLTHGAEINSRTGSKLGISPLMLAAM  155 (596)
Q Consensus        76 ~~~~t~L~~A~~~g~~eivk~LL~~g~~~~~~d~~g~t~L~~A~~~g~~eiv~~Ll~~g~~~~~~~~~~~g~t~L~~A~~  155 (596)
                      -.|..+|-|-...|..++.-.+++          +..|-+.+|...|++++.--......+.+.-      ...-..|..
T Consensus       621 LvGqaiIaYLqKkgypeiAL~FVk----------D~~tRF~LaLe~gnle~ale~akkldd~d~w------~rLge~Al~  684 (1202)
T KOG0292|consen  621 LVGQAIIAYLQKKGYPEIALHFVK----------DERTRFELALECGNLEVALEAAKKLDDKDVW------ERLGEEALR  684 (1202)
T ss_pred             cccHHHHHHHHhcCCcceeeeeec----------CcchheeeehhcCCHHHHHHHHHhcCcHHHH------HHHHHHHHH
Confidence            235566666666666666544432          3456667788888887665554443332211      122344667


Q ss_pred             cCCHHHHHHHHhcCCC
Q psy904          156 NGHTAAVKLLLDMGSD  171 (596)
Q Consensus       156 ~g~~eiv~~Ll~~~~~  171 (596)
                      .|+..+++..++...+
T Consensus       685 qgn~~IaEm~yQ~~kn  700 (1202)
T KOG0292|consen  685 QGNHQIAEMCYQRTKN  700 (1202)
T ss_pred             hcchHHHHHHHHHhhh
Confidence            8899998888876444


No 185
>PF11208 DUF2992:  Protein of unknown function (DUF2992);  InterPro: IPR016787 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=26.62  E-value=3.1e+02  Score=23.76  Aligned_cols=11  Identities=9%  Similarity=0.395  Sum_probs=5.4

Q ss_pred             CHHHHHHHHhC
Q psy904          326 HVKAVRWMVNH  336 (596)
Q Consensus       326 ~~~iv~~Ll~~  336 (596)
                      +.+|..||+.+
T Consensus        35 d~Ei~~fi~~~   45 (132)
T PF11208_consen   35 DPEIYEFILKH   45 (132)
T ss_pred             cHHHHHHHHHH
Confidence            34455555544


No 186
>TIGR01069 mutS2 MutS2 family protein. Function of MutS2 is unknown. It should not be considered a DNA mismatch repair protein. It is likely a DNA mismatch binding protein of unknown cellular function.
Probab=26.25  E-value=1.1e+03  Score=27.41  Aligned_cols=12  Identities=8%  Similarity=-0.058  Sum_probs=5.7

Q ss_pred             CCCCCcHHHHHH
Q psy904          245 PSSRDTALTIAA  256 (596)
Q Consensus       245 ~~~g~t~L~~A~  256 (596)
                      +..|.|.|.-.+
T Consensus       331 Ng~GKSTlLK~i  342 (771)
T TIGR01069       331 NTGGKTVTLKTL  342 (771)
T ss_pred             CCCCchHHHHHH
Confidence            344555554433


No 187
>KOG0388|consensus
Probab=25.32  E-value=1.2e+02  Score=33.86  Aligned_cols=11  Identities=18%  Similarity=0.262  Sum_probs=5.8

Q ss_pred             CCCCCCccchh
Q psy904          539 DANSQASCSSN  549 (596)
Q Consensus       539 ~~~~~~~~~~~  549 (596)
                      +.|-||+.+-.
T Consensus       543 e~n~q~~t~i~  553 (1185)
T KOG0388|consen  543 EGNFQGPTNID  553 (1185)
T ss_pred             cccccCCcccc
Confidence            34666666433


No 188
>KOG3859|consensus
Probab=25.20  E-value=6.8e+02  Score=24.80  Aligned_cols=12  Identities=33%  Similarity=0.592  Sum_probs=5.4

Q ss_pred             HHHHHHHCCCCC
Q psy904          263 FVELLLSKGAQV  274 (596)
Q Consensus       263 iv~~Ll~~g~di  274 (596)
                      |+.-|.++|++|
T Consensus       201 imsEL~sngv~I  212 (406)
T KOG3859|consen  201 IMSELVSNGVQI  212 (406)
T ss_pred             HHHHHHhcCcee
Confidence            344444444443


No 189
>KOG3859|consensus
Probab=24.06  E-value=7.1e+02  Score=24.66  Aligned_cols=13  Identities=15%  Similarity=0.358  Sum_probs=6.5

Q ss_pred             HHHHHHhCCCCCC
Q psy904          228 VGRVLLDKGADVN  240 (596)
Q Consensus       228 iv~~Ll~~g~~~~  240 (596)
                      ++.-|.++|..+.
T Consensus       201 imsEL~sngv~IY  213 (406)
T KOG3859|consen  201 IMSELVSNGVQIY  213 (406)
T ss_pred             HHHHHHhcCceee
Confidence            4444555555443


No 190
>KOG4591|consensus
Probab=23.59  E-value=58  Score=29.95  Aligned_cols=44  Identities=18%  Similarity=0.183  Sum_probs=30.2

Q ss_pred             CChHHHHHHhcCcHHHHH-HHHHCCCC----cccCCCCCCCHHHHHHHc
Q psy904          281 GNSPLWLAANGGHLSVVE-LLCKHGAD----IDSQDNRKVSCLMAAFRK  324 (596)
Q Consensus       281 g~TpL~~A~~~g~~~iv~-~Ll~~gad----~~~~~~~g~t~L~~A~~~  324 (596)
                      ...|||.|+.-+.-+++- |+++..+.    +|..|.+|..+|.+|...
T Consensus       222 Te~~LHk~iki~REDVl~LYfie~dakiP~~LNd~D~nG~~ALdiAL~~  270 (280)
T KOG4591|consen  222 TENPLHKAIKIEREDVLFLYFIEMDAKIPGILNDADHNGALALDIALCR  270 (280)
T ss_pred             CcchhHHhhhccccceeeehhhhccccccccccccCCCchHHHHHHHHH
Confidence            345888888888877765 66665443    456677788888887644


No 191
>PF04840 Vps16_C:  Vps16, C-terminal region;  InterPro: IPR006925 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=20.97  E-value=8.7e+02  Score=24.54  Aligned_cols=50  Identities=18%  Similarity=0.173  Sum_probs=34.3

Q ss_pred             HHHHhcCcHHHHHHHHHCCCCccc------cCCCCCcHHHHHHHcCCHHHHHHHHh
Q psy904           16 TLACAGGHEELVELLLSRGADIEH------RDKKGFTPLILAATAGHDKVVDILLN   65 (596)
Q Consensus        16 ~~A~~~g~~~ivk~Ll~~g~~i~~------~d~~g~t~L~~A~~~g~~eiv~~Ll~   65 (596)
                      +.|...|+..+...|++.-..+..      .-.....+|.-|+.+|+.|+|-.++-
T Consensus         8 ~~A~~~GR~~LA~~LL~~Ep~~~~qVplLL~m~e~e~AL~kAi~SgD~DLi~~vLl   63 (319)
T PF04840_consen    8 RKAYEEGRPKLATKLLELEPRASKQVPLLLKMGEDELALNKAIESGDTDLIYLVLL   63 (319)
T ss_pred             HHHHHcChHHHHHHHHHcCCChHHHHHHHhcCCchHHHHHHHHHcCCccHHHHHHH
Confidence            567789999999999987544321      11234467888888888887665543


No 192
>KOG4591|consensus
Probab=20.92  E-value=60  Score=29.88  Aligned_cols=44  Identities=16%  Similarity=0.197  Sum_probs=25.9

Q ss_pred             CcHHHHHHHcCCHHHHH-HHHhCCCCc---cccccCCCChHHHHHHHC
Q psy904           45 FTPLILAATAGHDKVVD-ILLNHKADM---EAQSERTKDTPLSLACSG   88 (596)
Q Consensus        45 ~t~L~~A~~~g~~eiv~-~Ll~~~~~~---~~~~~~~~~t~L~~A~~~   88 (596)
                      ..|||-|+.-++.+++- |+++..+.+   .+..+.+|..+|.+|...
T Consensus       223 e~~LHk~iki~REDVl~LYfie~dakiP~~LNd~D~nG~~ALdiAL~~  270 (280)
T KOG4591|consen  223 ENPLHKAIKIEREDVLFLYFIEMDAKIPGILNDADHNGALALDIALCR  270 (280)
T ss_pred             cchhHHhhhccccceeeehhhhccccccccccccCCCchHHHHHHHHH
Confidence            35777777777776543 455544333   233456677777777543


No 193
>PF04840 Vps16_C:  Vps16, C-terminal region;  InterPro: IPR006925 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=20.66  E-value=8.9e+02  Score=24.49  Aligned_cols=52  Identities=21%  Similarity=0.224  Sum_probs=35.3

Q ss_pred             HHHHHHHcCCHHHHHHHHhCCCCcccccc-----CCCChHHHHHHHCCcHHHHHHHH
Q psy904           47 PLILAATAGHDKVVDILLNHKADMEAQSE-----RTKDTPLSLACSGGRYEVVELLL   98 (596)
Q Consensus        47 ~L~~A~~~g~~eiv~~Ll~~~~~~~~~~~-----~~~~t~L~~A~~~g~~eivk~LL   98 (596)
                      .-+.|...|+..+...|+++-+....+..     .....+|.-|+.+|+.++|-.+|
T Consensus         6 IA~~A~~~GR~~LA~~LL~~Ep~~~~qVplLL~m~e~e~AL~kAi~SgD~DLi~~vL   62 (319)
T PF04840_consen    6 IARKAYEEGRPKLATKLLELEPRASKQVPLLLKMGEDELALNKAIESGDTDLIYLVL   62 (319)
T ss_pred             HHHHHHHcChHHHHHHHHHcCCChHHHHHHHhcCCchHHHHHHHHHcCCccHHHHHH
Confidence            34567888999999999988776543321     12346777777777777666554


Done!