RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy904
(596 letters)
>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId:
9606]}
Length = 408
Score = 202 bits (513), Expect = 2e-59
Identities = 111/363 (30%), Positives = 160/363 (44%), Gaps = 38/363 (10%)
Query: 2 DVDSETESNHDTALTLACAGGHEELVELLLSRGADIEHRDKKGFTPLILAATAGHDKVVD 61
+ + +T L +A GH E+ + LL A + + K TPL AA GH +V
Sbjct: 25 SPN-VSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTNMVK 83
Query: 62 ILLNHKAD--------------------------------MEAQSERTKDTPLSLACSGG 89
+LL + A+ +A + TPL +A G
Sbjct: 84 LLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYG 143
Query: 90 RYEVVELLLTRGANKEHRNVSDYTPLSLAASGGYVNIIKLLLTHGAEINSRTGSKLGISP 149
+ V ELLL R A+ + TPL +A ++I+KLLL G +S + G +P
Sbjct: 144 KVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSP--AWNGYTP 201
Query: 150 LMLAAMNGHTAAVKLLLDMGSDINAQIETNRNTALTLACFQGRHEVVSLLLDRKANVEHR 209
L +AA + LL G NA+ T L LA +G E+V+LLL ++AN
Sbjct: 202 LHIAAKQNQVEVARSLLQYGGSANAESVQG-VTPLHLAAQEGHAEMVALLLSKQANGNLG 260
Query: 210 AKTGLTPLMEAASGGYVEVGRVLLDKGADVNAPPVPSSRDTALTIAADKGHCRFVELLLS 269
K+GLTPL A G+V V VL+ G V+A T L +A+ G+ + V+ LL
Sbjct: 261 NKSGLTPLHLVAQEGHVPVADVLIKHGVMVDAT--TRMGYTPLHVASHYGNIKLVKFLLQ 318
Query: 270 KGAQVEVKNKKGNSPLWLAANGGHLSVVELLCKHGADIDSQDNRKVSCLMAAFRKGHVKA 329
A V K K G SPL AA GH +V LL K+GA + + + L A R G++
Sbjct: 319 HQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISV 378
Query: 330 VRW 332
Sbjct: 379 TDV 381
Score = 195 bits (496), Expect = 4e-57
Identities = 120/324 (37%), Positives = 163/324 (50%), Gaps = 6/324 (1%)
Query: 13 TALTLACAGGHEELVELLLSRGADIEHRDKKGFTPLILAATAGHDKVVDILLNHKADMEA 72
T L +A GH +V+ LL RGA + K TPL +AA AGH +V LL +KA + A
Sbjct: 2 TPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNA 61
Query: 73 QSERTKDTPLSLACSGGRYEVVELLLTRGANKEHRNVSDYTPLSLAASGGYVNIIKLLLT 132
+++ TPL A G +V+LLL AN + +TPL +AA G+V + LL
Sbjct: 62 KAKD-DQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLE 120
Query: 133 HGAEINSRTGSKLGISPLMLAAMNGHTAAVKLLLDMGSDINAQIETNRNTALTLACFQGR 192
A T K G +PL +AA G +LLL+ + NA N T L +A
Sbjct: 121 KEASQACMT--KKGFTPLHVAAKYGKVRVAELLLERDAHPNAA-GKNGLTPLHVAVHHNN 177
Query: 193 HEVVSLLLDRKANVEHRAKTGLTPLMEAASGGYVEVGRVLLDKGADVNAPPVPSSRDTAL 252
++V LLL R + A G TPL AA VEV R LL G NA V T L
Sbjct: 178 LDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQ--GVTPL 235
Query: 253 TIAADKGHCRFVELLLSKGAQVEVKNKKGNSPLWLAANGGHLSVVELLCKHGADIDSQDN 312
+AA +GH V LLLSK A + NK G +PL L A GH+ V ++L KHG +D+
Sbjct: 236 HLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTR 295
Query: 313 RKVSCLMAAFRKGHVKAVRWMVNH 336
+ L A G++K V++++ H
Sbjct: 296 MGYTPLHVASHYGNIKLVKFLLQH 319
Score = 163 bits (412), Expect = 3e-45
Identities = 104/349 (29%), Positives = 154/349 (44%), Gaps = 39/349 (11%)
Query: 2 DVDSETESNHDTALTLACAGGHEELVELLLSRGADIEHRDKKGFTPLILAATAGHDKVVD 61
V+++ + + T L A GH +V+LLL A+ G TPL +AA GH + V
Sbjct: 58 KVNAKAK-DDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVL 116
Query: 62 ILLNHKADMEAQSERTKDTPLSLACSGGRYEVVELLLTRGANKEHRNVSDYTPLSLAASG 121
LL +A +++ TPL +A G+ V ELLL R A+ + TPL +A
Sbjct: 117 ALLEKEASQACMTKK-GFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHH 175
Query: 122 GYVNIIKLLLTHGAEINSRTGSKLGISPLMLAAMNGHTAAVKLLLDMGSDINAQIETNRN 181
++I+KLLL G +S + G +PL +AA + LL G NA+
Sbjct: 176 NNLDIVKLLLPRGGSPHSP--AWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQG-V 232
Query: 182 TALTLACFQGRHEVVSLLLDRKANVEHRAKTGLTPLMEAASGGYVEVGRVLLDKGADVNA 241
T L LA +G E+V+LLL ++AN K+GLTPL A G+V V VL+ G V+A
Sbjct: 233 TPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDA 292
Query: 242 PP-------------------------------VPSSRDTALTIAADKGHCRFVELLLSK 270
+ L AA +GH V LLL
Sbjct: 293 TTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKN 352
Query: 271 GAQVEVKNKKGNSPLWLAANGGHLSVVELL---CKHGADIDSQDNRKVS 316
GA + G +PL +A G++SV ++L + + D ++S
Sbjct: 353 GASPNEVSSDGTTPLAIAKRLGYISVTDVLKVVTDETSFVLVSDKHRMS 401
Score = 142 bits (359), Expect = 6e-38
Identities = 62/192 (32%), Positives = 91/192 (47%), Gaps = 3/192 (1%)
Query: 147 ISPLMLAAMNGHTAAVKLLLDMGSDINAQIETNRNTALTLACFQGRHEVVSLLLDRKANV 206
++PL +A+ GH VK LL G+ N T L +A G EV LL KA V
Sbjct: 1 LTPLHVASFMGHLPIVKNLLQRGASPNVS-NVKVETPLHMAARAGHTEVAKYLLQNKAKV 59
Query: 207 EHRAKTGLTPLMEAASGGYVEVGRVLLDKGADVNAPPVPSSRDTALTIAADKGHCRFVEL 266
+AK TPL AA G+ + ++LL+ A+ N ++ T L IAA +GH V
Sbjct: 60 NAKAKDDQTPLHCAARIGHTNMVKLLLENNANPN--LATTAGHTPLHIAAREGHVETVLA 117
Query: 267 LLSKGAQVEVKNKKGNSPLWLAANGGHLSVVELLCKHGADIDSQDNRKVSCLMAAFRKGH 326
LL K A KKG +PL +AA G + V ELL + A ++ ++ L A +
Sbjct: 118 LLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNN 177
Query: 327 VKAVRWMVNHVA 338
+ V+ ++
Sbjct: 178 LDIVKLLLPRGG 189
Score = 94.7 bits (234), Expect = 2e-21
Identities = 41/126 (32%), Positives = 64/126 (50%), Gaps = 2/126 (1%)
Query: 214 LTPLMEAASGGYVEVGRVLLDKGADVNAPPVPSSRDTALTIAADKGHCRFVELLLSKGAQ 273
LTPL A+ G++ + + LL +GA N +T L +AA GH + LL A+
Sbjct: 1 LTPLHVASFMGHLPIVKNLLQRGASPNVSN--VKVETPLHMAARAGHTEVAKYLLQNKAK 58
Query: 274 VEVKNKKGNSPLWLAANGGHLSVVELLCKHGADIDSQDNRKVSCLMAAFRKGHVKAVRWM 333
V K K +PL AA GH ++V+LL ++ A+ + + L A R+GHV+ V +
Sbjct: 59 VNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLAL 118
Query: 334 VNHVAQ 339
+ A
Sbjct: 119 LEKEAS 124
Score = 71.9 bits (175), Expect = 5e-14
Identities = 31/142 (21%), Positives = 48/142 (33%), Gaps = 34/142 (23%)
Query: 9 SNHDTALTLACAGGHEELVELLLSRGADI------------------------------- 37
+ T L L GH + ++L+ G +
Sbjct: 262 KSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQA 321
Query: 38 --EHRDKKGFTPLILAATAGHDKVVDILLNHKADMEAQSERTKDTPLSLACSGGRYEVVE 95
+ K G++PL AA GH +V +LL + A S TPL++A G V +
Sbjct: 322 DVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSD-GTTPLAIAKRLGYISVTD 380
Query: 96 LLLTRGANKEHRNVSDYTPLSL 117
+L VSD +S
Sbjct: 381 VLKVVTDETSFVLVSDKHRMSF 402
>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human
(Homo sapiens) [TaxId: 9606]}
Length = 285
Score = 151 bits (381), Expect = 4e-42
Identities = 86/311 (27%), Positives = 131/311 (42%), Gaps = 44/311 (14%)
Query: 12 DTALTLACAGGHEELVELLLSRGADIEHRDKK-GFTPLILAATAGHDKVVDILLNHKADM 70
+ L A +LV+ LL GA++ ++++ G+TPL A + +V++LL H AD
Sbjct: 6 NHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADP 65
Query: 71 EAQSERTKDTPLSLACSGGRYEVVELLLTRGANKEHRNVSDYTPLSLAASGGYVNIIKLL 130
+ + LA G ++++L L++GA+ + +T AA G V +K L
Sbjct: 66 VLRKKNGATPF-LLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFL 124
Query: 131 LTHGAEINSR--------TGSKLGISPLMLAAMNGHTAAVKLLLD-MGSDINAQIETNRN 181
GA +N R K G + LM AA GH +K+LLD MG+D+NA RN
Sbjct: 125 YKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRN 184
Query: 182 TALTLACFQGRHEVVSLLLDRKANVEHRAKTGLTPLMEAASGGYVEVGRVLLDKGADVNA 241
+ +V + +LLD GADVN
Sbjct: 185 ALIHALLSSDDSDV------------------------------EAITHLLLDHGADVNV 214
Query: 242 PPVPSSRDTALTIAADKGHCRFVELLLSK-GAQVEVKNKKGNSPLWLAANGGHLSVVELL 300
T L +A +K H V+ LL + ++ + G + L LA + ELL
Sbjct: 215 R--GERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELL 272
Query: 301 CKHGADIDSQD 311
CK GA D D
Sbjct: 273 CKRGASTDCGD 283
Score = 120 bits (301), Expect = 4e-31
Identities = 72/254 (28%), Positives = 112/254 (44%), Gaps = 16/254 (6%)
Query: 2 DVDSETESNHDTALTLACAGGHEELVELLLSRGADIEHRDKKGFTPLILAATAGHDKVVD 61
+V+ + E T L A E++VELLL GAD R K G TP +LAA AG K++
Sbjct: 30 NVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLK 89
Query: 62 ILLNHKADMEAQSERTKDTPLSLACSGGRYEVVELLLTRGANKEHRNVSD---------- 111
+ L+ AD+ T A G+ + ++ L RGAN R +
Sbjct: 90 LFLSKGADVNECD-FYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGG 148
Query: 112 YTPLSLAASGGYVNIIKLLLTH-GAEINSRTGSKLGISPLMLAAMN--GHTAAVKLLLDM 168
T L AA G+V ++K+LL GA++N+ L + + A LLLD
Sbjct: 149 ATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDH 208
Query: 169 GSDINAQIETNRNTALTLACFQGRHEVVSLLLDRK-ANVEHRAKTGLTPLMEAASGGYVE 227
G+D+N + T L LA + +V LL+++ + G T L+ A +
Sbjct: 209 GADVNVR-GERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKK 267
Query: 228 VGRVLLDKGADVNA 241
+ +L +GA +
Sbjct: 268 IAELLCKRGASTDC 281
Score = 108 bits (269), Expect = 8e-27
Identities = 68/241 (28%), Positives = 108/241 (44%), Gaps = 15/241 (6%)
Query: 109 VSDYTPLSLAASGGYVNIIKLLLTHGAEINSRTGSKLGISPLMLAAMNGHTAAVKLLLDM 168
V D L A V++++ LL GA +N + + G +PL A V+LLL
Sbjct: 3 VEDNHLLIKAVQNEDVDLVQQLLEGGANVNFQE-EEGGWTPLHNAVQMSREDIVELLLRH 61
Query: 169 GSDINAQIETNRNTALTLACFQGRHEVVSLLLDRKANVEHRAKTGLTPLMEAASGGYVEV 228
G+D + + LA G +++ L L + A+V G T MEAA G V+
Sbjct: 62 GADPVLRKKNGATPF-LLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKA 120
Query: 229 GRVLLDKGADVNAPPVPSSRD--------TALTIAADKGHCRFVELLLSK-GAQVEVKNK 279
+ L +GA+VN TAL AA+KGH +++LL + GA V +
Sbjct: 121 LKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDN 180
Query: 280 KGNSPLWLA----ANGGHLSVVELLCKHGADIDSQDNRKVSCLMAAFRKGHVKAVRWMVN 335
G + L A + ++ LL HGAD++ + R + L+ A K H+ V+ ++
Sbjct: 181 MGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLE 240
Query: 336 H 336
Sbjct: 241 Q 241
Score = 98.9 bits (245), Expect = 2e-23
Identities = 43/146 (29%), Positives = 61/146 (41%), Gaps = 7/146 (4%)
Query: 1 MDVDSETESNHDTALTLACAGGHEELVELLLSR-GADIEHRDKKGFTPLILAATAGHD-- 57
+ TAL A GH E++++LL GAD+ D G LI A + D
Sbjct: 138 KEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSD 197
Query: 58 --KVVDILLNHKADMEAQSERTKDTPLSLACSGGRYEVVELLLTR-GANKEHRNVSDYTP 114
+ +LL+H AD+ + ER K TPL LA +V+ LL + + T
Sbjct: 198 VEAITHLLLDHGADVNVRGERGK-TPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTA 256
Query: 115 LSLAASGGYVNIIKLLLTHGAEINSR 140
L LA I +LL GA +
Sbjct: 257 LLLAVELKLKKIAELLCKRGASTDCG 282
Score = 90.0 bits (222), Expect = 1e-20
Identities = 62/207 (29%), Positives = 94/207 (45%), Gaps = 13/207 (6%)
Query: 148 SPLMLAAMNGHTAAVKLLLDMGSDINAQIETNRNTALTLACFQGRHEVVSLLLDRKANVE 207
L+ A N V+ LL+ G+++N Q E T L A R ++V LLL A+
Sbjct: 7 HLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPV 66
Query: 208 HRAKTGLTPLMEAASGGYVEVGRVLLDKGADVNAPPVPSSRDTALTIAADKGHCRFVELL 267
R K G TP + AA G V++ ++ L KGADVN TA AA G + ++ L
Sbjct: 67 LRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFY--GFTAFMEAAVYGKVKALKFL 124
Query: 268 LSKGA----------QVEVKNKKGNSPLWLAANGGHLSVVELLCKH-GADIDSQDNRKVS 316
+GA E K G + L AA GH+ V+++L GAD+++ DN +
Sbjct: 125 YKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRN 184
Query: 317 CLMAAFRKGHVKAVRWMVNHVAQFPSD 343
L+ A V + + + +D
Sbjct: 185 ALIHALLSSDDSDVEAITHLLLDHGAD 211
Score = 80.0 bits (196), Expect = 4e-17
Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
Query: 23 HEELVELLLSRGADIEHRDKKGFTPLILAATAGHDKVVDILLNHK-ADMEAQSERTKDTP 81
E + LLL GAD+ R ++G TPLILA H +V LL + ++ T
Sbjct: 198 VEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSD-GKTA 256
Query: 82 LSLACSGGRYEVVELLLTRGANKEHRNV 109
L LA ++ ELL RGA+ + ++
Sbjct: 257 LLLAVELKLKKIAELLCKRGASTDCGDL 284
Score = 64.6 bits (156), Expect = 5e-12
Identities = 38/141 (26%), Positives = 63/141 (44%), Gaps = 1/141 (0%)
Query: 215 TPLMEAASGGYVEVGRVLLDKGADVNAPPVPSSRDTALTIAADKGHCRFVELLLSKGAQV 274
L++A V++ + LL+ GA+VN T L A VELLL GA
Sbjct: 7 HLLIKAVQNEDVDLVQQLLEGGANVNFQE-EEGGWTPLHNAVQMSREDIVELLLRHGADP 65
Query: 275 EVKNKKGNSPLWLAANGGHLSVVELLCKHGADIDSQDNRKVSCLMAAFRKGHVKAVRWMV 334
++ K G +P LAA G + +++L GAD++ D + M A G VKA++++
Sbjct: 66 VLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLY 125
Query: 335 NHVAQFPSDQEMTRYIQTVND 355
A ++ + +
Sbjct: 126 KRGANVNLRRKTKEDQERLRK 146
Score = 53.4 bits (127), Expect = 2e-08
Identities = 13/73 (17%), Positives = 28/73 (38%), Gaps = 1/73 (1%)
Query: 280 KGNSPLWLAANGGHLSVVELLCKHGADIDSQDNR-KVSCLMAAFRKGHVKAVRWMVNHVA 338
+ N L A + +V+ L + GA+++ Q+ + L A + V ++ H A
Sbjct: 4 EDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGA 63
Query: 339 QFPSDQEMTRYIQ 351
++
Sbjct: 64 DPVLRKKNGATPF 76
Score = 45.7 bits (107), Expect = 7e-06
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 6 ETESNHDTALTLACAGGHEELVELLLSRGADIEHRD 41
+T+S+ TAL LA +++ ELL RGA + D
Sbjct: 248 DTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGD 283
>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416
{Legionella pneumophila [TaxId: 446]}
Length = 346
Score = 141 bits (357), Expect = 4e-38
Identities = 52/346 (15%), Positives = 96/346 (27%), Gaps = 40/346 (11%)
Query: 12 DTALTLACAGGHEELVELLLSR-GADIEHRDKKGFTPLILAATAGHDKVVDILLNHKADM 70
D L L E L + +S + K + L T ++V +L + A
Sbjct: 13 DPQLRLIPWILWENLFQHFISANELSLMTLSYKEAIHIFLPGTKNMEQVRQLLCLYYAHY 72
Query: 71 EAQSERTK----------DTPLSLACSGGRYEVVE---LLLTRGANKEHRNVSDYTPLSL 117
+++ + +A G ++ LLLT + +Y L
Sbjct: 73 NRNAKQLWSDAHKKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRL 132
Query: 118 AASGGYVNIIKLLLTHGAEINSRTGSKLGISPLMLAAMNGHTAAVKLLLDMGSDINAQIE 177
AA G+++++ L LAA NGH + L ++ +
Sbjct: 133 AAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMI 192
Query: 178 TNRN--TALTLACFQGRHEVVSLLLDRKANVEHRAKTGLTPLMEAASGGYVEVGRVLLDK 235
N A +G H V++ LLD + + G V +
Sbjct: 193 QAENYYAFRWAAVGRGHHNVINFLLDCPVMLA-------YAEIHEFEYGEKYVNPFIARH 245
Query: 236 GADVNAPPVPSSRDTALTIAADKGHCRFVELLLSKGAQVEVKNKKGNSPLWLAANGGHLS 295
+ A ++ G V ++ L + L
Sbjct: 246 VNRLK------EMHDAFKLSNPDGVFDLVT------KSECLQGFYMLRNLIRRNDEVLLD 293
Query: 296 VVELLCKHGAD-----IDSQDNRKVSCLMAAFRKGHVKAVRWMVNH 336
+ L + L A R G+ A +++
Sbjct: 294 DIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACALLLSI 339
Score = 138 bits (349), Expect = 5e-37
Identities = 46/314 (14%), Positives = 81/314 (25%), Gaps = 43/314 (13%)
Query: 13 TALTLACAGGHEELVELLLSRGA-----------DIEHRDKKGFTPLILAATAGHDKVVD 61
+ L E++ +LL A D + K +AA G +D
Sbjct: 48 IHIFLPGTKNMEQVRQLLCLYYAHYNRNAKQLWSDAHKKGIKSEVICFVAAITGCSSALD 107
Query: 62 I---LLNHKADMEAQSERTKDTPLSLACSGGRYEVVELLLTRGANKEHRNVS--DYTPLS 116
LL ++ LA G V+ L + + +Y
Sbjct: 108 TLCLLLTSDEIVKVIQAE-NYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFR 166
Query: 117 LAASGGYVNIIKLLLTHGAEINSR-TGSKLGISPLMLAAMNGHTAAVKLLLDMGSDINAQ 175
LAA G+++++ L + ++ + A GH + LLD +
Sbjct: 167 LAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVMLA-- 224
Query: 176 IETNRNTALTLACFQGRHEVVSLLLDRKANVEHRAKTGLTPLMEAASGGYVEVGRVLLDK 235
A G V + ++ + G ++
Sbjct: 225 ------YAEIHEFEYGEKYVNPFIARHVNRLKE----MHDAFKLSNPDGVFDL------- 267
Query: 236 GADVNAPPVPSSRDTALTIAADKGHCRFVELLLSKGAQVEVKNK-----KGNSPLWLAAN 290
+ L D+ + LLS + N L LA
Sbjct: 268 -VTKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALR 326
Query: 291 GGHLSVVELLCKHG 304
G+ LL
Sbjct: 327 LGNQGACALLLSIP 340
Score = 110 bits (276), Expect = 3e-27
Identities = 40/269 (14%), Positives = 70/269 (26%), Gaps = 56/269 (20%)
Query: 6 ETESNHDTALTLACAGGHEELVELLLSRGADIEHRDKK--GFTPLILAATAGHDKVVDIL 63
++ + A LA GH ++ L + + LAA GH V++ L
Sbjct: 121 VIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRL 180
Query: 64 LNHKADMEAQSERTKDTPLSLACSGGRYEVVELLLTRGANKEHRNVSDYTPLSLAASGGY 123
A + + Y A G+
Sbjct: 181 CELAPTE-------------------------------ATAMIQAENYYAFRWAAVGRGH 209
Query: 124 VNIIKLLLTHGAEINSRTGSKLGISPLMLAAMNGHTAAVKLLLDMGSDINAQIETNRNTA 183
N+I LL + + G + + + + A
Sbjct: 210 HNVINFLLDCPVMLA---------YAEIHEFEYGEKYVNPFIARHVNRLK-----EMHDA 255
Query: 184 LTLACFQGRHEVVSLLLDRKANVEHRAKTGLTPLMEAASGGYVEVGRVLLDKGADVNAPP 243
L+ G ++V + + L L+ ++ R LL P
Sbjct: 256 FKLSNPDGVFDLV------TKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAP 309
Query: 244 V---PSSRDTALTIAADKGHCRFVELLLS 269
P + L +A G+ LLLS
Sbjct: 310 TATIPGDANELLRLALRLGNQGACALLLS 338
Score = 59.9 bits (144), Expect = 2e-10
Identities = 15/105 (14%), Positives = 27/105 (25%), Gaps = 14/105 (13%)
Query: 250 TALTIAADKGHCRFVELLLSKGAQVEV-----------KNKKGNSPLWLAANGGHLSVVE 298
+ + K + +LL A K K ++AA G S ++
Sbjct: 48 IHIFLPGTKNMEQVRQLLCLYYAHYNRNAKQLWSDAHKKGIKSEVICFVAAITGCSSALD 107
Query: 299 ---LLCKHGADIDSQDNRKVSCLMAAFRKGHVKAVRWMVNHVAQF 340
LL + A GH+ + +
Sbjct: 108 TLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTE 152
>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit
10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}
Length = 223
Score = 121 bits (303), Expect = 5e-32
Identities = 67/220 (30%), Positives = 104/220 (47%), Gaps = 5/220 (2%)
Query: 15 LTLACAGGHEELVELLLSRGADIEHRDKKGFTPLILAATAGHDKVVDILLNHKADMEAQS 74
LA +G EEL E +L+ + D+ T L A +AGH ++V+ L
Sbjct: 8 CNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEF-LLQLGVPVNDK 66
Query: 75 ERTKDTPLSLACSGGRYEVVELLLTRGANKEHRNVSDYTPLSLAASGGYVNIIKLLLTHG 134
+ +PL +A S GR E+V+ LL +GA N + TPL AAS I +LL G
Sbjct: 67 DDAGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGG 126
Query: 135 AEINSRTGSKLGISPLMLAAMNGHTAAVKLLLDMGSDINAQIETNRNTALTLACFQGRHE 194
A +++ + + AA G+ + +LL + N Q +T NT L LAC + R E
Sbjct: 127 ANPDAKD--HYEATAMHRAAAKGNLKMIHILLYYKASTNIQ-DTEGNTPLHLACDEERVE 183
Query: 195 VVSLLLDRKANVEHRAKTGLTPLMEAASGGYVEVGRVLLD 234
LL+ + A++ K TPL A GG + + +++
Sbjct: 184 EAKLLVSQGASIYIENKEEKTPLQ-VAKGGLGLILKRMVE 222
Score = 114 bits (285), Expect = 1e-29
Identities = 62/226 (27%), Positives = 102/226 (45%), Gaps = 6/226 (2%)
Query: 109 VSDYTPLSLAASGGYVNIIKLLLTHGAEINSRTGSKLGISPLMLAAMNGHTAAVKLLLDM 168
VS+ +LA SG + + +L + + + L A GHT V+ L
Sbjct: 2 VSNLMVCNLAYSGKLEELKESILADKSLATRTD--QDSRTALHWACSAGHTEIVEFL-LQ 58
Query: 169 GSDINAQIETNRNTALTLACFQGRHEVVSLLLDRKANVEHRAKTGLTPLMEAASGGYVEV 228
+ + L +A GR E+V LL + A V + G TPL AAS E+
Sbjct: 59 LGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEI 118
Query: 229 GRVLLDKGADVNAPPVPSSRDTALTIAADKGHCRFVELLLSKGAQVEVKNKKGNSPLWLA 288
+LL+ GA+ +A TA+ AA KG+ + + +LL A +++ +GN+PL LA
Sbjct: 119 AVMLLEGGANPDAKD--HYEATAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHLA 176
Query: 289 ANGGHLSVVELLCKHGADIDSQDNRKVSCLMAAFRKGHVKAVRWMV 334
+ + +LL GA I ++ + + L A + G ++ MV
Sbjct: 177 CDEERVEEAKLLVSQGASIYIENKEEKTPLQVA-KGGLGLILKRMV 221
Score = 91.6 bits (226), Expect = 1e-21
Identities = 60/195 (30%), Positives = 90/195 (46%), Gaps = 6/195 (3%)
Query: 147 ISPLML--AAMNGHTAAVK-LLLDMGSDINAQIETNRNTALTLACFQGRHEVVSLLLDRK 203
+S LM+ A +G +K +L S + +R TAL AC G E+V LL
Sbjct: 2 VSNLMVCNLAYSGKLEELKESILADKSLATRTDQDSR-TALHWACSAGHTEIVEFLLQLG 60
Query: 204 ANVEHRAKTGLTPLMEAASGGYVEVGRVLLDKGADVNAPPVPSSRDTALTIAADKGHCRF 263
V + G +PL AAS G E+ + LL KGA VNA V + T L AA K
Sbjct: 61 VPVNDKDDAGWSPLHIAASAGRDEIVKALLGKGAQVNA--VNQNGCTPLHYAASKNRHEI 118
Query: 264 VELLLSKGAQVEVKNKKGNSPLWLAANGGHLSVVELLCKHGADIDSQDNRKVSCLMAAFR 323
+LL GA + K+ + + AA G+L ++ +L + A + QD + L A
Sbjct: 119 AVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHLACD 178
Query: 324 KGHVKAVRWMVNHVA 338
+ V+ + +V+ A
Sbjct: 179 EERVEEAKLLVSQGA 193
Score = 90.0 bits (222), Expect = 5e-21
Identities = 43/158 (27%), Positives = 78/158 (49%), Gaps = 4/158 (2%)
Query: 10 NHDTALTLACAGGHEELVELLLSRGADIEHRDKKGFTPLILAATAGHDKVVDILLNHKAD 69
+ L +A + G +E+V+ LL +GA + ++ G TPL AA+ ++ +LL A+
Sbjct: 69 AGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGAN 128
Query: 70 MEAQSERTKDTPLSLACSGGRYEVVELLLTRGANKEHRNVSDYTPLSLAASGGYVNIIKL 129
+A+ + T + A + G +++ +LL A+ ++ TPL LA V KL
Sbjct: 129 PDAKDHY-EATAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHLACDEERVEEAKL 187
Query: 130 LLTHGAEINSRTGSKLGISPLMLAAMNGHTAAVKLLLD 167
L++ GA I K +PL +A G +K +++
Sbjct: 188 LVSQGASIYIEN--KEEKTPLQVAK-GGLGLILKRMVE 222
Score = 88.5 bits (218), Expect = 2e-20
Identities = 63/200 (31%), Positives = 104/200 (52%), Gaps = 5/200 (2%)
Query: 2 DVDSETESNHDTALTLACAGGHEELVELLLSRGADIEHRDKKGFTPLILAATAGHDKVVD 61
+ + T+ + TAL AC+ GH E+VE LL G + +D G++PL +AA+AG D++V
Sbjct: 28 SLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVK 87
Query: 62 ILLNHKADMEAQSERTKDTPLSLACSGGRYEVVELLLTRGANKEHRNVSDYTPLSLAASG 121
LL A + A ++ TPL A S R+E+ +LL GAN + ++ + T + AA+
Sbjct: 88 ALLGKGAQVNAVNQN-GCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAK 146
Query: 122 GYVNIIKLLLTHGAEINSRTGSKLGISPLMLAAMNGHTAAVKLLLDMGSDINAQIETNRN 181
G + +I +LL + A N + G +PL LA KLL+ G+ I +
Sbjct: 147 GNLKMIHILLYYKASTNIQD--TEGNTPLHLACDEERVEEAKLLVSQGASIYIE-NKEEK 203
Query: 182 TALTLACFQGRHEVVSLLLD 201
T L +A G ++ +++
Sbjct: 204 TPLQVAK-GGLGLILKRMVE 222
Score = 36.9 bits (84), Expect = 0.004
Identities = 10/65 (15%), Positives = 20/65 (30%)
Query: 285 LWLAANGGHLSVVELLCKHGADIDSQDNRKVSCLMAAFRKGHVKAVRWMVNHVAQFPSDQ 344
LA +G + E + + D + L A GH + V +++
Sbjct: 8 CNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKD 67
Query: 345 EMTRY 349
+
Sbjct: 68 DAGWS 72
>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor
I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId:
10090]}
Length = 255
Score = 119 bits (298), Expect = 5e-31
Identities = 65/272 (23%), Positives = 86/272 (31%), Gaps = 25/272 (9%)
Query: 39 HRDKKGFTPLILAATAGHDKVVDILLNHKADMEAQSERTKD--TPLSLACSGGRYEVVEL 96
+ + G T L LA H+ +D LL A E + T L LA G VE
Sbjct: 4 YVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEK 63
Query: 97 LLTRGANKEHRNVSDYTPLSLAASGGYVNIIKLLLTHGAEINSRTGSKLGISPLMLAAMN 156
L GA +T L LA +LL
Sbjct: 64 LYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDT 123
Query: 157 GHTAAVKLLLDMGSDINAQIETNRNTALTLACFQGRHEVVSLLLDRKANVEHRAKTGLTP 216
H A + +E D + +E G TP
Sbjct: 124 SHAPA----------------------AVDSQPNPENEEEPRDEDWRLQLEAENYDGHTP 161
Query: 217 LMEAASGGYVEVGRVLLDKGADVNAPPVPSSRDTALTIAADKGHCRFVELLLSKGAQVEV 276
L A E+ R+L D GAD+N P R T L +A + +ELLL GA
Sbjct: 162 LHVAVIHKDAEMVRLLRDAGADLNKPEPTCGR-TPLHLAVEAQAASVLELLLKAGADPTA 220
Query: 277 KNKKGNSPLWLAANGGHLSVVELLCKHGADID 308
+ G +PL A + + LL HGA
Sbjct: 221 RMYGGRTPLGSALLRPNPILARLLRAHGAPEP 252
Score = 116 bits (290), Expect = 6e-30
Identities = 59/246 (23%), Positives = 85/246 (34%), Gaps = 20/246 (8%)
Query: 12 DTALTLACAGGHEELVELLLSRGADIEH---RDKKGFTPLILAATAGHDKVVDILLNHKA 68
DTAL LA HE ++ LL A E+ ++ G T L LAA G V+ L A
Sbjct: 10 DTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGA 69
Query: 69 DMEAQSERTKDTPLSLACSGGRYEVVELLLTRGANKE--------------HRNVSDYTP 114
+ LAC + +LL + + S
Sbjct: 70 GVLVAERGGHTAL-HLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPA 128
Query: 115 LSLAASGGYVNIIKLLLTHGAEINSRTGSKLGISPLMLAAMNGHTAAVKLLLDMGSDINA 174
+ ++ + G +PL +A ++ V+LL D G+D+N
Sbjct: 129 AVDSQPNPENEEEPRDEDWRLQLEAENYD--GHTPLHVAVIHKDAEMVRLLRDAGADLNK 186
Query: 175 QIETNRNTALTLACFQGRHEVVSLLLDRKANVEHRAKTGLTPLMEAASGGYVEVGRVLLD 234
T T L LA V+ LLL A+ R G TPL A + R+L
Sbjct: 187 PEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRA 246
Query: 235 KGADVN 240
GA
Sbjct: 247 HGAPEP 252
Score = 102 bits (253), Expect = 6e-25
Identities = 50/247 (20%), Positives = 78/247 (31%), Gaps = 17/247 (6%)
Query: 112 YTPLSLAASGGYVNIIKLLLTHGAEINSR-TGSKLGISPLMLAAMNGHTAAVKLLLDMGS 170
T L LA + + LL A + LG + L LAA+ G + V+ L G+
Sbjct: 10 DTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGA 69
Query: 171 DINAQIETNRNTALTLACFQGRHEVVSLLLDRKANVEHRAKTGLTP-------------- 216
+ LAC H +LL + + A
Sbjct: 70 GVLVAERGGHTAL-HLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPA 128
Query: 217 LMEAASGGYVEVGRVLLDKGADVNAPPVPSSRDTALTIAADKGHCRFVELLLSKGAQVEV 276
+++ E D + A K L + +
Sbjct: 129 AVDSQPNPENEEEPRDEDWRLQLEAEN-YDGHTPLHVAVIHKDAEMVRLLRDAGADLNKP 187
Query: 277 KNKKGNSPLWLAANGGHLSVVELLCKHGADIDSQDNRKVSCLMAAFRKGHVKAVRWMVNH 336
+ G +PL LA SV+ELL K GAD ++ + L +A + + R + H
Sbjct: 188 EPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAH 247
Query: 337 VAQFPSD 343
A P D
Sbjct: 248 GAPEPED 254
Score = 77.4 bits (189), Expect = 2e-16
Identities = 36/132 (27%), Positives = 52/132 (39%)
Query: 4 DSETESNHDTALTLACAGGHEELVELLLSRGADIEHRDKKGFTPLILAATAGHDKVVDIL 63
D +++H A + E +E + G TPL +A ++V +L
Sbjct: 118 DCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLL 177
Query: 64 LNHKADMEAQSERTKDTPLSLACSGGRYEVVELLLTRGANKEHRNVSDYTPLSLAASGGY 123
+ AD+ TPL LA V+ELLL GA+ R TPL A
Sbjct: 178 RDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPN 237
Query: 124 VNIIKLLLTHGA 135
+ +LL HGA
Sbjct: 238 PILARLLRAHGA 249
Score = 64.3 bits (155), Expect = 4e-12
Identities = 20/60 (33%), Positives = 25/60 (41%)
Query: 10 NHDTALTLACAGGHEELVELLLSRGADIEHRDKKGFTPLILAATAGHDKVVDILLNHKAD 69
T L LA ++ELLL GAD R G TPL A + + +L H A
Sbjct: 191 CGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAHGAP 250
Score = 60.5 bits (145), Expect = 9e-11
Identities = 27/195 (13%), Positives = 47/195 (24%), Gaps = 19/195 (9%)
Query: 172 INAQIETNRNTALTLACFQGRHEVVSLLLDRKANVEH---RAKTGLTPLMEAASGGYVEV 228
+ + + +TAL LA + LL A E+ + G T L AA G
Sbjct: 1 VFGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEAST 60
Query: 229 GRVLLDKGADVNAPPVPSSRDTALTIAADKGHCRFVELLLSKGAQVEVKNKKGNSP---- 284
L GA V +A +LL
Sbjct: 61 VEKLYAAGAGVLVAERGGHTAL--HLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQD 118
Query: 285 ----------LWLAANGGHLSVVELLCKHGADIDSQDNRKVSCLMAAFRKGHVKAVRWMV 334
+ +++++ + L A + VR +
Sbjct: 119 CTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLR 178
Query: 335 NHVAQFPSDQEMTRY 349
+ A +
Sbjct: 179 DAGADLNKPEPTCGR 193
Score = 59.7 bits (143), Expect = 2e-10
Identities = 30/109 (27%), Positives = 45/109 (41%), Gaps = 3/109 (2%)
Query: 249 DTALTIAADKGHCRFVELLLSKGA---QVEVKNKKGNSPLWLAANGGHLSVVELLCKHGA 305
DTAL +A H F++ LL A ++++N G + L LAA G S VE L GA
Sbjct: 10 DTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGA 69
Query: 306 DIDSQDNRKVSCLMAAFRKGHVKAVRWMVNHVAQFPSDQEMTRYIQTVN 354
+ + + L A R ++ P D T Q+ +
Sbjct: 70 GVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQD 118
Score = 52.0 bits (123), Expect = 5e-08
Identities = 14/78 (17%), Positives = 25/78 (32%), Gaps = 3/78 (3%)
Query: 277 KNKKGNSPLWLAANGGHLSVVELLCKHGAD---IDSQDNRKVSCLMAAFRKGHVKAVRWM 333
+ G++ L LA H ++ L A +D Q++ + L A G V +
Sbjct: 5 VTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKL 64
Query: 334 VNHVAQFPSDQEMTRYIQ 351
A +
Sbjct: 65 YAAGAGVLVAERGGHTAL 82
Score = 37.8 bits (86), Expect = 0.002
Identities = 8/28 (28%), Positives = 10/28 (35%)
Query: 9 SNHDTALTLACAGGHEELVELLLSRGAD 36
T L A + L LL + GA
Sbjct: 223 YGGRTPLGSALLRPNPILARLLRAHGAP 250
>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans
[TaxId: 6239]}
Length = 277
Score = 101 bits (251), Expect = 1e-24
Identities = 50/303 (16%), Positives = 97/303 (32%), Gaps = 40/303 (13%)
Query: 12 DTALTLAC-AGGHEELVELLLSRGADIEHRDKKGFTPLILAATAGHDKVVDILLNHKADM 70
++ + L A G + E + +I + T L A+ + + L+ H+A
Sbjct: 1 ESPIKLHTEAAGSYAITEPITRESVNII-DPRHNRTVLHWIASNSSAEKSEDLIVHEAKE 59
Query: 71 EAQSERTKDTPLSLACSGGRYEVVELLLTRGANKEHRNVSDYTPLSLAASGGYVNIIKLL 130
+ GA+ + + TPL LA ++ L
Sbjct: 60 --------------------------CIAAGADVNAMDCDENTPLMLAVLARRRRLVAYL 93
Query: 131 LTHGAEINSRTGSKLGISPLMLAAMNGHTAAVKLLLDMGSDINAQIETNRNTALTLACFQ 190
+ GA+ S+ A + L +++ N TAL +
Sbjct: 94 MKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHN 153
Query: 191 GRH-----------EVVSLLLDRKANVEHRAKTGLTPLMEAASGGYVEVGRVLLDKGADV 239
+ + D A + G T L AA + + + L+ +
Sbjct: 154 EGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSN 213
Query: 240 NAPPVPSSRDTALTIAADKGHCRFVELLLSKGAQVEVKNKKGNSPLWLAANGGHLSVVEL 299
T + +AA +G V L+ +GA VE + ++ LA H ++V++
Sbjct: 214 K-DKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDI 272
Query: 300 LCK 302
+
Sbjct: 273 FDR 275
Score = 96.3 bits (238), Expect = 8e-23
Identities = 55/275 (20%), Positives = 97/275 (35%), Gaps = 26/275 (9%)
Query: 79 DTPLSLAC-SGGRYEVVELLLTRGANKEHRNVSDYTPLSLAASGGYVNIIKLLLTH---- 133
++P+ L + G Y + E + N + T L AS + L+ H
Sbjct: 1 ESPIKLHTEAAGSYAITEPITRESVNIIDPR-HNRTVLHWIASNSSAEKSEDLIVHEAKE 59
Query: 134 ----GAEINSRTGSKLGISPLMLAAMNGHTAAVKLLLDMGSDINAQIETNRNTALTLACF 189
GA++N+ +PLMLA + V L + +AL A
Sbjct: 60 CIAAGADVNAMD--CDENTPLMLAVLARRRRLVAYL-MKAGADPTIYNKSERSALHQAAA 116
Query: 190 QGRHEVVSLLLDRKANVEHRAKTGLTPLME----AASGGYVEVGRVLLDKGADVNAPPVP 245
++ +L+ + + A + G +V L
Sbjct: 117 NRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDG 176
Query: 246 SSR--------DTALTIAADKGHCRFVELLLS-KGAQVEVKNKKGNSPLWLAANGGHLSV 296
++R TAL AA + V+ L+ KG+ + +++ G +P+ LAA G + V
Sbjct: 177 AARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEV 236
Query: 297 VELLCKHGADIDSQDNRKVSCLMAAFRKGHVKAVR 331
V L + GA +++ D + A H V
Sbjct: 237 VMYLIQQGASVEAVDATDHTARQLAQANNHHNIVD 271
Score = 92.1 bits (227), Expect = 2e-21
Identities = 51/252 (20%), Positives = 93/252 (36%), Gaps = 21/252 (8%)
Query: 2 DVDSETESNHDTALTLACAGGHEELVELLL--------SRGADIEHRDKKGFTPLILAAT 53
V+ ++ T L + E E L+ + GAD+ D TPL+LA
Sbjct: 24 SVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVL 83
Query: 54 AGHDKVVDILLNHKADMEAQSERTKDTPLSLACSGGRYEVVELLLTRGANKEHRNVSDYT 113
A ++V L +++ + L A + + ++ +L K D
Sbjct: 84 ARRRRLVAY-LMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRN 142
Query: 114 P------LSLAASGGYVNIIKLLLTHGAEINSRTGSKL------GISPLMLAAMNGHTAA 161
++ V KLL+ GA+++ ++ G + L AA +
Sbjct: 143 GMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPI 202
Query: 162 VKLLLDMGSDINAQIETNRNTALTLACFQGRHEVVSLLLDRKANVEHRAKTGLTPLMEAA 221
VK L+ + + + T + LA +GR EVV L+ + A+VE T T A
Sbjct: 203 VKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQ 262
Query: 222 SGGYVEVGRVLL 233
+ + + +
Sbjct: 263 ANNHHNIVDIFD 274
Score = 53.6 bits (127), Expect = 2e-08
Identities = 29/146 (19%), Positives = 49/146 (33%), Gaps = 12/146 (8%)
Query: 215 TPLM-EAASGGYVEVGRVLLDKGADVNAPPVPSSRDTALTIAADKGHCRFVELLL----- 268
+P+ + G + + + ++ P T L A E L+
Sbjct: 2 SPIKLHTEAAGSYAITEPITRESVNIIDP---RHNRTVLHWIASNSSAEKSEDLIVHEAK 58
Query: 269 ---SKGAQVEVKNKKGNSPLWLAANGGHLSVVELLCKHGADIDSQDNRKVSCLMAAFRKG 325
+ GA V + N+PL LA +V L K GAD + + S L A
Sbjct: 59 ECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANR 118
Query: 326 HVKAVRWMVNHVAQFPSDQEMTRYIQ 351
+ +M+N +E+ R
Sbjct: 119 DFGMMVYMLNSTKLKGDIEELDRNGM 144
>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 301
Score = 101 bits (251), Expect = 3e-24
Identities = 34/266 (12%), Positives = 84/266 (31%), Gaps = 20/266 (7%)
Query: 75 ERTK-DTPLSLACSGGRYEVVELLLTRGANKEHRNV-SDYTPLSLAASGGYVNIIKLLLT 132
++ K + L E+ L +N+ S+ ++ +
Sbjct: 35 QKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQEVNDAFPN 94
Query: 133 HGAEINSRTGSKLGISPLMLAAMNGHTAAVKLLLDMGSDINAQIETNRNTALTLACFQGR 192
+N G +PL + VK L+ GS+ + +
Sbjct: 95 TQLNLNIPVDEH-GNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNN 153
Query: 193 HEV------VSLLLDRKANVEHRAKTGLTPLMEAASGG--------YVEVGRVLLDKGAD 238
++ + L + +T L ++ + Y+++ + K +
Sbjct: 154 YDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQN 213
Query: 239 VNAPPVPSSRDTALTIAADKGHCRFVELLLSK---GAQVEVKNKKGNSPLWLAANGGHLS 295
+ +++ + +E L K + ++ G++ L +AA G++S
Sbjct: 214 RPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNIS 273
Query: 296 VVELLCKHGADIDSQDNRKVSCLMAA 321
+V+ L +GAD + + +
Sbjct: 274 IVDALLDYGADPFIANKSGLRPVDFG 299
Score = 99.7 bits (247), Expect = 9e-24
Identities = 43/282 (15%), Positives = 86/282 (30%), Gaps = 20/282 (7%)
Query: 26 LVELLLSRGADIEHRDKKGFTPLILAATAGHDKVVDILLNHKADMEAQSERTKDTPLSLA 85
+++ L S + + K L ++ L N ++ ++ + ++
Sbjct: 21 IMKALPSPVVNDNEQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVS 80
Query: 86 CSGGRYEVVELLLTRGANKEHRNVSD-YTPLSLAASGGYVNIIKLLLTHGAEINS----- 139
EV + N TPL S + ++K L+ HG+
Sbjct: 81 FDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMG 140
Query: 140 RTGSKLGISPLMLAAMNGHTAAVKLLLDMGSDINAQIETNRNTALTLACFQGRHEVVS-- 197
+ + + A + L ++ T + + + G
Sbjct: 141 ESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYY 200
Query: 198 -------LLLDRKANVEHRAKTGLTPLMEAASGGYVEVGRVLLDK---GADVNAPPVPSS 247
++ + ++ + + + L K +NA S+
Sbjct: 201 LDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNA--QDSN 258
Query: 248 RDTALTIAADKGHCRFVELLLSKGAQVEVKNKKGNSPLWLAA 289
DT L IAA G+ V+ LL GA + NK G P+ A
Sbjct: 259 GDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGA 300
Score = 99.7 bits (247), Expect = 1e-23
Identities = 37/239 (15%), Positives = 86/239 (35%), Gaps = 21/239 (8%)
Query: 2 DVDSETESNHDTALTLACAGGHEELVELLLSRGADIEHR-DKKGFTPLILAATAGHDKVV 60
+ +SE S++ ++ +E+ + + ++ D+ G TPL + + ++V
Sbjct: 64 NRNSEGGSSNQQQQHVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELV 123
Query: 61 DILLNHKADMEAQSERTKDTPLSLACSGGRYEV------VELLLTRGANKEHRNVSDYTP 114
L+ H ++ + + S Y+ ++ L ++ N +
Sbjct: 124 KHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHH 183
Query: 115 LSLAASGGYVNII---------KLLLTHGAEINSRTGSKLGISPLMLAAMNGHTAAVKLL 165
+ + + + ++ G+ S + ++ L
Sbjct: 184 IIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQS-GTNEKESKPNDKNGERKDSILENL 242
Query: 166 L---DMGSDINAQIETNRNTALTLACFQGRHEVVSLLLDRKANVEHRAKTGLTPLMEAA 221
+ + +NAQ ++N +T L +A G +V LLD A+ K+GL P+ A
Sbjct: 243 DLKWIIANMLNAQ-DSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGA 300
Score = 97.0 bits (240), Expect = 9e-23
Identities = 40/271 (14%), Positives = 88/271 (32%), Gaps = 20/271 (7%)
Query: 4 DSETESNHDTALTLACAGGHEELVELLLSRGADIEHRDKK-GFTPLILAATAGHDKVVDI 62
D+E + + L +E+ L + ++ ++ + +V D
Sbjct: 32 DNEQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQEVNDA 91
Query: 63 LLNHKADMEAQSERTKDTPLSLACSGGRYEVVELLLTRGANKEHRNVSDYTPLSLAASG- 121
N + ++ + +TPL S E+V+ L+ G+N+ + + + L A
Sbjct: 92 FPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSV 151
Query: 122 ------GYVNIIKLLLTHGAEINSRTGSKL-------GISPLMLAAMNGHTAAVKLLLDM 168
+ ++ L +S + L G++ AA + ++
Sbjct: 152 NNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKK 211
Query: 169 GSDINAQIETNRNTALTLACFQGRHEVVSLLLDR---KANVEHRAKTGLTPLMEAASGGY 225
+ + + + + ++ L + + + G T L AA G
Sbjct: 212 QNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGN 271
Query: 226 VEVGRVLLDKGADVNAPPVPSSRDTALTIAA 256
+ + LLD GAD S + A
Sbjct: 272 ISIVDALLDYGADPFIA--NKSGLRPVDFGA 300
Score = 81.3 bits (199), Expect = 2e-17
Identities = 38/264 (14%), Positives = 89/264 (33%), Gaps = 19/264 (7%)
Query: 93 VVELLLTRGANKEHRNVSDYTPLSLAASGGYVNIIKLLLTHGAEINSRTGSKLGISPLML 152
+++ L + N + + L + L + NS GS +
Sbjct: 21 IMKALPSPVVNDNEQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSS-NQQQQHV 79
Query: 153 AAMNGHTAAVKLLLDMGSDINAQIETNRNTALTLACFQGRHEVVSLLLDRKANVEHRAKT 212
+ + + ++N ++ + NT L E+V L+ +N +
Sbjct: 80 SFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNM 139
Query: 213 GLTPLMEAASG-------GYVEVGRVLLDKGADVNA-------PPVPSSRDTALTIAADK 258
G + L++A + + L ++ + +S T + AA
Sbjct: 140 GESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKY 199
Query: 259 GHCRFVELLLSKGAQ-VEVKNKKGNSPLWLAANGGHLSVVELLCKH---GADIDSQDNRK 314
+ ++ K + ++ + S S++E L +++QD+
Sbjct: 200 YLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNG 259
Query: 315 VSCLMAAFRKGHVKAVRWMVNHVA 338
+CL A R G++ V ++++ A
Sbjct: 260 DTCLNIAARLGNISIVDALLDYGA 283
>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1,
MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}
Length = 291
Score = 98.6 bits (244), Expect = 2e-23
Identities = 63/256 (24%), Positives = 99/256 (38%), Gaps = 12/256 (4%)
Query: 12 DTALTLACAGGHEELVELLLSRGADIEHRDKKGFTPLILAATAGHDKVVDILLNHKADME 71
AC+ G E V LL RGADI + + G T L A + + L
Sbjct: 41 GAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDN-VDMVKFLVENGANI 99
Query: 72 AQSERTKDTPLSLACSGGRYEVVELLLTRGANKEHRNVSDYTPLSLAASGGYVNIIKLLL 131
Q + PL A S G ++ E L+++GA+ N TPL +A +++ +
Sbjct: 100 NQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEV 159
Query: 132 THGAEINSRTGSKLGISPLMLAAMNGHTAAVKLLLDMGSDINAQIETNRNTALTLACFQG 191
+ I + L+ G + + + TAL +A +G
Sbjct: 160 NRQG---------VDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKG 210
Query: 192 RHEVVSLLLDRKANVEHRAKTGLTPLMEAASGGYVEVGRVLLDKGADVNAPPVPSSRDTA 251
EV+ LL+ + +V + G TPL AA G E R+L++ D+ A V TA
Sbjct: 211 YTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEA--VNKVGQTA 268
Query: 252 LTIAADKGHCRFVELL 267
+A + EL
Sbjct: 269 FDVADEDILGYLEELQ 284
Score = 85.9 bits (211), Expect = 4e-19
Identities = 54/243 (22%), Positives = 92/243 (37%), Gaps = 11/243 (4%)
Query: 79 DTPLSLACSGGRYEVVELLLTRGANKEHRNVSDYTPLSLAASGGYVNIIKLLLTHGAEIN 138
ACS G E V LL RGA+ + NV T L A V+++K L+ +GA IN
Sbjct: 41 GAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANIN 100
Query: 139 SRTGSKLGISPLMLAAMNGHTAAVKLLLDMGSDINAQIETNRNTALTLACFQGRHEVVSL 198
PL AA G+ + L+ G+ + A + +
Sbjct: 101 QPDNEG--WIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNE 158
Query: 199 LLDRKANVEHRAKTGLTPLMEAASGGYVEVGRVLLDKGADVNAPPVPSSRDTALTIAADK 258
+ + ++E K ++ A + TAL +AA K
Sbjct: 159 VNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKS---------GGTALHVAAAK 209
Query: 259 GHCRFVELLLSKGAQVEVKNKKGNSPLWLAANGGHLSVVELLCKHGADIDSQDNRKVSCL 318
G+ ++LL+ V +K+ G +PL AA+ G +L ++ D+++ + +
Sbjct: 210 GYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAF 269
Query: 319 MAA 321
A
Sbjct: 270 DVA 272
Score = 69.7 bits (169), Expect = 9e-14
Identities = 47/228 (20%), Positives = 81/228 (35%), Gaps = 11/228 (4%)
Query: 111 DYTPLSLAASGGYVNIIKLLLTHGAEINSRTGSKLGISPLMLAAMNGHTAAVKLLLDMGS 170
D A S G + LL GA+IN G++ L A ++ + + L
Sbjct: 40 DGAVFLAACSSGDTEEVLRLLERGADINYAN--VDGLTALHQACIDDNVD-MVKFLVENG 96
Query: 171 DINAQIETNRNTALTLACFQGRHEVVSLLLDRKANVEHRAKTGLTPLMEAASGGYVEVGR 230
Q + L A G ++ L+ + A+V G TPL A E+ +
Sbjct: 97 ANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQ 156
Query: 231 VLLDKGADVNAPPVPSSRDTALTIAADKGHCRFVELLLSKGAQVEVKNKKGNSPLWLAAN 290
+++ + L S K G + L +AA
Sbjct: 157 NEVNRQGVDIEAARKE--------EERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAA 208
Query: 291 GGHLSVVELLCKHGADIDSQDNRKVSCLMAAFRKGHVKAVRWMVNHVA 338
G+ V++LL + D++ +D + L AA G +A R +V ++
Sbjct: 209 KGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLC 256
Score = 61.7 bits (148), Expect = 5e-11
Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 1 MDVDSETESNHDTALTLACAGGHEELVELLLSRGADIEHRDKKGFTPLILAATAGHDKVV 60
D + TAL +A A G+ E+++LL+ D+ +D G+TPL AA G ++
Sbjct: 189 HINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEAC 248
Query: 61 DILLNHKADMEAQSERTKDTPLSLACSGGRYEVVELL 97
IL+ + DMEA ++ + T +A + EL
Sbjct: 249 RILVENLCDMEAVNKVGQ-TAFDVADEDILGYLEELQ 284
Score = 52.8 bits (125), Expect = 4e-08
Identities = 25/128 (19%), Positives = 51/128 (39%)
Query: 240 NAPPVPSSRDTALTIAADKGHCRFVELLLSKGAQVEVKNKKGNSPLWLAANGGHLSVVEL 299
V A G V LL +GA + N G + L A ++ +V+
Sbjct: 32 KKTKVKFDDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKF 91
Query: 300 LCKHGADIDSQDNRKVSCLMAAFRKGHVKAVRWMVNHVAQFPSDQEMTRYIQTVNDKELL 359
L ++GA+I+ DN L AA G++ ++++ A + + ++E +
Sbjct: 92 LVENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAM 151
Query: 360 DKCQECSM 367
++ + +
Sbjct: 152 EELLQNEV 159
Score = 51.6 bits (122), Expect = 8e-08
Identities = 26/159 (16%), Positives = 54/159 (33%)
Query: 281 GNSPLWLAANGGHLSVVELLCKHGADIDSQDNRKVSCLMAAFRKGHVKAVRWMVNHVAQF 340
+ A + G V L + GADI+ + ++ L A +V V+++V + A
Sbjct: 40 DGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANI 99
Query: 341 PSDQEMTRYIQTVNDKELLDKCQECSMVIRVAKNQQAERANKNANILLEELDMEKWREES 400
E + + +I EE E + E
Sbjct: 100 NQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEV 159
Query: 401 KRAAQARKRERKKQKKLEKKEEKRKAMEEEEEVIRVAKN 439
R + RK+++++ ++ ++ +R AK+
Sbjct: 160 NRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKS 198
>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}
Length = 228
Score = 95.3 bits (235), Expect = 8e-23
Identities = 63/228 (27%), Positives = 99/228 (43%), Gaps = 12/228 (5%)
Query: 112 YTPLSLAASGGYVNIIKLLLT----HGAEINSRTGSKLGISPLMLAAMNGHTAAVKLLLD 167
TPL +A G + + L+ G E++ L +PL LA + + V+LL+
Sbjct: 4 DTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYN--NLRQTPLHLAVITTLPSVVRLLVT 61
Query: 168 MGSDINAQIETNRNTALTLACFQGRHEVVSLLLDRKANVEHRAKT----GLTPLMEAASG 223
G+ A + A AC + LLD A + GLT L A +
Sbjct: 62 AGASPMALDRHGQTAAHL-ACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNT 120
Query: 224 GYVEVGRVLLDKGADVNAPPVPSSRDTALTIAADKGHCRFVELLLSKGAQVEVKNKKGNS 283
E ++LL++GAD++A + S R L A + V+LLL GA V + G+S
Sbjct: 121 ECQETVQLLLERGADIDAVDIKSGRSP-LIHAVENNSLSMVQLLLQHGANVNAQMYSGSS 179
Query: 284 PLWLAANGGHLSVVELLCKHGADIDSQDNRKVSCLMAAFRKGHVKAVR 331
L A+ G L +V L + GAD ++ + LM A + + +R
Sbjct: 180 ALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILR 227
Score = 91.8 bits (226), Expect = 1e-21
Identities = 58/225 (25%), Positives = 93/225 (41%), Gaps = 11/225 (4%)
Query: 12 DTALTLACAGGHEELVELLLS----RGADIEHRDKKGFTPLILAATAGHDKVVDILLNHK 67
DT L +A G+ V L++ G +++ + TPL L A V LL
Sbjct: 4 DTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHL-AVITTLPSVVRLLVTA 62
Query: 68 ADMEAQSERTKDTPLSLACSGGRYEVVELLLTRGANKEHRNVSD----YTPLSLAASGGY 123
+R T LAC + LL A + T L +A +
Sbjct: 63 GASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTEC 122
Query: 124 VNIIKLLLTHGAEINSRTGSKLGISPLMLAAMNGHTAAVKLLLDMGSDINAQIETNRNTA 183
++LLL GA+I++ G SPL+ A N + V+LLL G+++N + ++A
Sbjct: 123 QETVQLLLERGADIDAVDIKS-GRSPLIHAVENNSLSMVQLLLQHGANVN-AQMYSGSSA 180
Query: 184 LTLACFQGRHEVVSLLLDRKANVEHRAKTGLTPLMEAASGGYVEV 228
L A +G +V L+ A+ + TPLM A S +++
Sbjct: 181 LHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDI 225
Score = 83.7 bits (205), Expect = 7e-19
Identities = 60/223 (26%), Positives = 96/223 (43%), Gaps = 9/223 (4%)
Query: 44 GFTPLILAATAGHDKVVDILLN----HKADMEAQSERTKDTPLSLACSGGRYEVVELLLT 99
G TPL +A G+ V L+N +++ + + TPL LA VV LL+T
Sbjct: 3 GDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNL-RQTPLHLAVITTLPSVVRLLVT 61
Query: 100 RGANKEHRNVSDYTPLSLAASGGYVNIIKLLLTHGA--EINSRTGSKLGISPLMLAAMNG 157
GA+ + T LA ++ LL A ++ + G++ L +A
Sbjct: 62 AGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTE 121
Query: 158 HTAAVKLLLDMGSDINAQIETNRNTALTLACFQGRHEVVSLLLDRKANVEHRAKTGLTPL 217
V+LLL+ G+DI+A + + L A +V LLL ANV + +G + L
Sbjct: 122 CQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSAL 181
Query: 218 MEAASGGYVEVGRVLLDKGADVNAPPVPSSRDTALTIAADKGH 260
A+ G + + R L+ GAD + DT L +A +
Sbjct: 182 HSASGRGLLPLVRTLVRSGADSSL--KNCHNDTPLMVARSRRV 222
Score = 69.5 bits (168), Expect = 5e-14
Identities = 36/150 (24%), Positives = 63/150 (42%), Gaps = 6/150 (4%)
Query: 18 ACAGGHEELVELLLSRGADIEHRDK----KGFTPLILAATAGHDKVVDILLNHKADMEAQ 73
AC + LL A + G T L +A + V +LL AD++A
Sbjct: 80 ACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAV 139
Query: 74 SERTKDTPLSLACSGGRYEVVELLLTRGANKEHRNVSDYTPLSLAASGGYVNIIKLLLTH 133
++ +PL A +V+LLL GAN + S + L A+ G + +++ L+
Sbjct: 140 DIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRS 199
Query: 134 GAEINSRTGSKLGISPLMLAAMNGHTAAVK 163
GA+ + + +PLM+A ++
Sbjct: 200 GADSSLKN--CHNDTPLMVARSRRVIDILR 227
Score = 61.8 bits (148), Expect = 2e-11
Identities = 33/119 (27%), Positives = 54/119 (45%)
Query: 10 NHDTALTLACAGGHEELVELLLSRGADIEHRDKKGFTPLILAATAGHDKVVDILLNHKAD 69
+ TAL +A +E V+LLL RGADI+ D K ++ A + + LL
Sbjct: 109 DGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGA 168
Query: 70 MEAQSERTKDTPLSLACSGGRYEVVELLLTRGANKEHRNVSDYTPLSLAASGGYVNIIK 128
+ + L A G +V L+ GA+ +N + TPL +A S ++I++
Sbjct: 169 NVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILR 227
Score = 54.9 bits (130), Expect = 5e-09
Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 1/93 (1%)
Query: 2 DVDSETESNHDTALTLACAGGHEELVELLLSRGADIEHRDKKGFTPLILAATAGHDKVVD 61
D+D+ + + L A +V+LLL GA++ + G + L A+ G +V
Sbjct: 135 DIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVR 194
Query: 62 ILLNHKADMEAQSERTKDTPLSLACSGGRYEVV 94
L+ AD ++ DTPL +A S +++
Sbjct: 195 TLVRSGADSSLKNCH-NDTPLMVARSRRVIDIL 226
Score = 49.8 bits (117), Expect = 3e-07
Identities = 28/105 (26%), Positives = 43/105 (40%), Gaps = 4/105 (3%)
Query: 249 DTALTIAADKGHCRFVELLLS----KGAQVEVKNKKGNSPLWLAANGGHLSVVELLCKHG 304
DT L IA +G+ V L++ G ++++ N +PL LA SVV LL G
Sbjct: 4 DTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAG 63
Query: 305 ADIDSQDNRKVSCLMAAFRKGHVKAVRWMVNHVAQFPSDQEMTRY 349
A + D + A +R +++ A D E Y
Sbjct: 64 ASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNY 108
>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain
{Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Length = 209
Score = 94.1 bits (232), Expect = 1e-22
Identities = 60/209 (28%), Positives = 92/209 (44%), Gaps = 4/209 (1%)
Query: 25 ELVELLLSRGADIEHR-DKKGFTPLILAATAGHDKVVDILLNHKADMEAQSERTKDTPLS 83
+++ LL++GA++ DK G T L LAA LL+ AD +Q + +
Sbjct: 3 QVISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHA 62
Query: 84 LACSGGRYEVVELLLTRGANKEHRNVSDYTPLSLAASGGYVNIIKLLLTHGAEINSRTGS 143
+ LL R N R TPL LAA +++ L+T A+IN+
Sbjct: 63 AVAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAAD-- 120
Query: 144 KLGISPLMLAAMNGHTAAVKLLLDMGSDINAQIETNRNTALTLACFQGRHEVVSLLLDRK 203
G + L AA +T AV +LL ++ +AQ + T L LA +G +E LLD
Sbjct: 121 NSGKTALHWAAAVNNTEAVNILLMHHANRDAQ-DDKDETPLFLAAREGSYEASKALLDNF 179
Query: 204 ANVEHRAKTGLTPLMEAASGGYVEVGRVL 232
AN E P A+ + ++ R+L
Sbjct: 180 ANREITDHMDRLPRDVASERLHHDIVRLL 208
Score = 89.5 bits (220), Expect = 5e-21
Identities = 64/206 (31%), Positives = 90/206 (43%), Gaps = 3/206 (1%)
Query: 126 IIKLLLTHGAEINSRTGSKLGISPLMLAAMNGHTAAVKLLLDMGSDINAQIETNRNTALT 185
+I LL GAE+N+ K G + L LAA A K LLD G+D N+Q T R
Sbjct: 4 VISDLLAQGAELNATMD-KTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHA 62
Query: 186 LACFQGRHEVVSLLLDRKANVEHRAKTGLTPLMEAASGGYVEVGRVLLDKGADVNAPPVP 245
LL +R N+ R G TPL+ AA + L+ AD+NA
Sbjct: 63 AVAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINA--AD 120
Query: 246 SSRDTALTIAADKGHCRFVELLLSKGAQVEVKNKKGNSPLWLAANGGHLSVVELLCKHGA 305
+S TAL AA + V +LL A + ++ K +PL+LAA G + L + A
Sbjct: 121 NSGKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEASKALLDNFA 180
Query: 306 DIDSQDNRKVSCLMAAFRKGHVKAVR 331
+ + D+ A + H VR
Sbjct: 181 NREITDHMDRLPRDVASERLHHDIVR 206
Score = 88.3 bits (217), Expect = 1e-20
Identities = 51/210 (24%), Positives = 80/210 (38%), Gaps = 5/210 (2%)
Query: 92 EVVELLLTRGANKEHRNVSD-YTPLSLAASGGYVNIIKLLLTHGAEINSRTGSKLGISPL 150
+V+ LL +GA T L LAA + K LL GA+ NS+ +
Sbjct: 3 QVISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHA 62
Query: 151 MLAAMNGHTAAVKLLLDMGSDINAQIETNRNTALTLACFQGRHEVVSLLLDRKANVEHRA 210
++LL + + T L LA +V L+ A++
Sbjct: 63 A--VAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAAD 120
Query: 211 KTGLTPLMEAASGGYVEVGRVLLDKGADVNAPPVPSSRDTALTIAADKGHCRFVELLLSK 270
+G T L AA+ E +LL A+ +A +T L +AA +G + LL
Sbjct: 121 NSGKTALHWAAAVNNTEAVNILLMHHANRDAQDDK--DETPLFLAAREGSYEASKALLDN 178
Query: 271 GAQVEVKNKKGNSPLWLAANGGHLSVVELL 300
A E+ + P +A+ H +V LL
Sbjct: 179 FANREITDHMDRLPRDVASERLHHDIVRLL 208
Score = 69.4 bits (168), Expect = 4e-14
Identities = 56/198 (28%), Positives = 86/198 (43%), Gaps = 3/198 (1%)
Query: 2 DVDSETESNHDTALTLACAGGHEELVELLLSRGADIEHRDKKGFTPLILAATAGHDKVVD 61
++++ + +T+L LA + + LL GAD +D G TPL A A V
Sbjct: 14 ELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHAAVAADAMGVFQ 73
Query: 62 ILLNHKADMEAQSERTKDTPLSLACSGGRYEVVELLLTRGANKEHRNVSDYTPLSLAASG 121
ILL ++A TPL LA +VE L+T A+ + S T L AA+
Sbjct: 74 ILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADNSGKTALHWAAAV 133
Query: 122 GYVNIIKLLLTHGAEINSRTGSKLGISPLMLAAMNGHTAAVKLLLDMGSDINAQIETNRN 181
+ +LL H A +++ +PL LAA G A K LLD ++ +
Sbjct: 134 NNTEAVNILLMHHANRDAQDDKDE--TPLFLAAREGSYEASKALLDNFANREIT-DHMDR 190
Query: 182 TALTLACFQGRHEVVSLL 199
+A + H++V LL
Sbjct: 191 LPRDVASERLHHDIVRLL 208
Score = 46.7 bits (109), Expect = 2e-06
Identities = 22/87 (25%), Positives = 39/87 (44%), Gaps = 1/87 (1%)
Query: 264 VELLLSKGAQVEVK-NKKGNSPLWLAANGGHLSVVELLCKHGADIDSQDNRKVSCLMAAF 322
+ LL++GA++ +K G + L LAA + L GAD +SQDN + L AA
Sbjct: 5 ISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHAAV 64
Query: 323 RKGHVKAVRWMVNHVAQFPSDQEMTRY 349
+ + ++ + A + +
Sbjct: 65 AADAMGVFQILLRNRATNLNARMHDGT 91
>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit
10, gankyrin {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 229
Score = 88.0 bits (216), Expect = 3e-20
Identities = 51/232 (21%), Positives = 83/232 (35%), Gaps = 8/232 (3%)
Query: 79 DTPLSLACSGGRYEVVELLL-TRGANKEHRNVSDYTPLSLAASGGYVNIIKLLLTHGAEI 137
+ PL AC + V+ LL ++ + ++ PL + S I LL+ +
Sbjct: 1 NYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENV 60
Query: 138 NSRTGSKLGISPLMLAAMNGHTAAVKLLLDM--GSDINAQIETNRNTALTLACFQGRHEV 195
N A + V L +I T L LA + EV
Sbjct: 61 NLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEV 120
Query: 196 VSLLLDRKANVEHRAKTGLTPLMEAASGGYVEVGRVLLDKGADVNAPPVPSSRDTALTIA 255
L++ A+V + K PL AAS G +++ +L G T L A
Sbjct: 121 SQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAV-NWQDKQGWTPLFHA 179
Query: 256 ADKGHCRFVELLLSK-GAQVEVKNKKGNSPLWLAANGGHLSVVELLCKHGAD 306
+GH LL+ K GA+ ++ + KG +A + V + + D
Sbjct: 180 LAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVAL---NEQVKKFFLNNVVD 228
Score = 86.8 bits (213), Expect = 7e-20
Identities = 41/233 (17%), Positives = 80/233 (34%), Gaps = 11/233 (4%)
Query: 12 DTALTLACAGGHEELVELLL-SRGADIEHRDKKGFTPLILAATAGHDKVVDILLNHKADM 70
+ L AC V+ LL S+ + + +D+ G PL + + ++ LL+ ++
Sbjct: 1 NYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENV 60
Query: 71 EAQSERTKDTPLSLACSGGRYEVVELLLTRGA----NKEHRNVSDYTPLSLAASGGYVNI 126
+ + + + T L LA + +
Sbjct: 61 NLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEV 120
Query: 127 IKLLLTHGAEINSRTGSKLGISPLMLAAMNGHTAAVKLLLDMGSDINAQIETNRNTALTL 186
+ L+ +GA + + K PL AA G ++LL +G + T L
Sbjct: 121 SQFLIENGASVRIKD--KFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFH 178
Query: 187 ACFQGRHEVVSLLLDRK-ANVEHRAKTGLTPLMEAASGGYVEVGRVLLDKGAD 238
A +G + LL+++ A + G A + +V + L+ D
Sbjct: 179 ALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALN---EQVKKFFLNNVVD 228
Score = 72.2 bits (175), Expect = 8e-15
Identities = 45/223 (20%), Positives = 79/223 (35%), Gaps = 11/223 (4%)
Query: 113 TPLSLAASGGYVNIIKLLL-THGAEINSRTGSKLGISPLMLAAMNGHTAAVKLLLDMGSD 171
PL A ++ LL + + + + + G PL + LL +
Sbjct: 2 YPLHQACMENEFFKVQELLHSKPSLLLQKD--QDGRIPLHWSVSFQAHEITSFLLSKMEN 59
Query: 172 INAQIETNRNTALTLACFQGRHEVVSLLLDRKANVEHRAKTG----LTPLMEAASGGYVE 227
+N + + + + ++ +T L A + E
Sbjct: 60 VNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFE 119
Query: 228 VGRVLLDKGADVNAPPVPSSRDTALTIAADKGHCRFVELLLSKGAQ-VEVKNKKGNSPLW 286
V + L++ GA V + L AA G + +ELL G V ++K+G +PL+
Sbjct: 120 VSQFLIENGASVRIKDKFN--QIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLF 177
Query: 287 LAANGGHLSVVE-LLCKHGADIDSQDNRKVSCLMAAFRKGHVK 328
A GH L+ K+GA+ D DN+ A + K
Sbjct: 178 HALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALNEQVKK 220
Score = 58.3 bits (139), Expect = 3e-10
Identities = 29/127 (22%), Positives = 51/127 (40%), Gaps = 4/127 (3%)
Query: 10 NHDTALTLACAGGHEELVELLLSRGADIEHRDKKGFTPLILAATAGHDKVVDILLNHKAD 69
T L LA E+ + L+ GA + +DK PL AA+ G K++++L
Sbjct: 104 QGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKS 163
Query: 70 MEAQSERTKDTPLSLACSGGRYEVVELLLTR-GANKEHRNVSDYTPLSLAASGGYVNIIK 128
++ TPL A + G + LL+ + GA + + +A + + K
Sbjct: 164 AVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALN---EQVKK 220
Query: 129 LLLTHGA 135
L +
Sbjct: 221 FFLNNVV 227
Score = 52.5 bits (124), Expect = 3e-08
Identities = 18/120 (15%), Positives = 37/120 (30%), Gaps = 1/120 (0%)
Query: 249 DTALTIAADKGHCRFVELLL-SKGAQVEVKNKKGNSPLWLAANGGHLSVVELLCKHGADI 307
+ L A + V+ LL SK + + K++ G PL + + + L ++
Sbjct: 1 NYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENV 60
Query: 308 DSQDNRKVSCLMAAFRKGHVKAVRWMVNHVAQFPSDQEMTRYIQTVNDKELLDKCQECSM 367
+ D S V + + + + Q V L + +
Sbjct: 61 NLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEV 120
Score = 50.2 bits (118), Expect = 1e-07
Identities = 17/119 (14%), Positives = 31/119 (26%), Gaps = 1/119 (0%)
Query: 282 NSPLWLAANGGHLSVV-ELLCKHGADIDSQDNRKVSCLMAAFRKGHVKAVRWMVNHVAQF 340
N PL A V ELL + + +D L + + ++++ +
Sbjct: 1 NYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENV 60
Query: 341 PSDQEMTRYIQTVNDKELLDKCQECSMVIRVAKNQQAERANKNANILLEELDMEKWREE 399
D T E + + N + L + K E
Sbjct: 61 NLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFE 119
>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens)
[TaxId: 9606]}
Length = 221
Score = 75.3 bits (183), Expect = 5e-16
Identities = 51/242 (21%), Positives = 84/242 (34%), Gaps = 35/242 (14%)
Query: 12 DTALTLACAGGH----EELVELLLSRGADIEHRDKKGFTPLILAATAGHDKVVDILLNHK 67
D+ L LA E++ + A + ++ TPL LA ++ + LL
Sbjct: 3 DSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAG 62
Query: 68 ADMEAQSERTKDTPLSLACSGGRYEVVELLLTRGANKEHRNVSDYTPLSLAASGGYVNII 127
D E + R G +
Sbjct: 63 CDPELRDFRGNTPLHLACEQGCLAS------------------------------VGVLT 92
Query: 128 KLLLTHGAEINSRTGSKLGISPLMLAAMNGHTAAVKLLLDMGSDINAQIETNRNTALTLA 187
+ T + + G + L LA+++G+ V+LL+ +G+D+NAQ N TAL LA
Sbjct: 93 QSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLA 152
Query: 188 CFQGRHEVVSLLLDRKANVEHRAKTGLTPLMEAASGGYVEVGRVLLDKGADVNAPPVPSS 247
++VSLLL A+V G +P + + L + N +P S
Sbjct: 153 VDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLE-NLQMLPES 211
Query: 248 RD 249
D
Sbjct: 212 ED 213
Score = 70.3 bits (170), Expect = 3e-14
Identities = 48/211 (22%), Positives = 74/211 (35%), Gaps = 12/211 (5%)
Query: 113 TPLSLAASGGYVN----IIKLLLTHGAEINSRTGSKLGISPLMLAAMNGHTAAVKLLLDM 168
+ L LA +I+ + A +N + L +PL LA + + LL
Sbjct: 4 SFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQN--NLQQTPLHLAVITNQPEIAEALLGA 61
Query: 169 GSDINAQIETNRNTALTLACFQGRHEVVSL-----LLDRKANVEHRAKTGLTPLMEAASG 223
G D + V L + ++ G T L A+
Sbjct: 62 GCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIH 121
Query: 224 GYVEVGRVLLDKGADVNAPPVPSSRDTALTIAADKGHCRFVELLLSKGAQVEVKNKKGNS 283
GY+ + +L+ GADVNA + R TAL +A D + V LLL GA V +G S
Sbjct: 122 GYLGIVELLVSLGADVNAQEPCNGR-TALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYS 180
Query: 284 PLWLAANGGHLSVVELLCKHGADIDSQDNRK 314
P L + + L + +
Sbjct: 181 PYQLTWGRPSTRIQQQLGQLTLENLQMLPES 211
Score = 66.1 bits (159), Expect = 7e-13
Identities = 49/203 (24%), Positives = 82/203 (40%), Gaps = 10/203 (4%)
Query: 146 GISPLMLAAMNGHTAA----VKLLLDMGSDINAQIETNRNTALTLACFQGRHEVVSLLLD 201
G S L LA ++ A ++ + + +N Q + T L LA + E+ LL
Sbjct: 2 GDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNN-LQQTPLHLAVITNQPEIAEALLG 60
Query: 202 RKANVEHRAKTGLTPLMEAASGGYVEVGRVLLDKGADVNAPPV----PSSRDTALTIAAD 257
+ E R G TPL A G + VL + + + T L +A+
Sbjct: 61 AGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASI 120
Query: 258 KGHCRFVELLLSKGAQV-EVKNKKGNSPLWLAANGGHLSVVELLCKHGADIDSQDNRKVS 316
G+ VELL+S GA V + G + L LA + + +V LL K GAD++ + S
Sbjct: 121 HGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYS 180
Query: 317 CLMAAFRKGHVKAVRWMVNHVAQ 339
+ + + + + +
Sbjct: 181 PYQLTWGRPSTRIQQQLGQLTLE 203
Score = 56.4 bits (134), Expect = 1e-09
Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 5/77 (6%)
Query: 10 NHDTALTLACAGGHEELVELLLSRGADIEHRDKKGFTPLILAATAGHDKVVDILLNHKAD 69
N TAL LA + +LV LLL GAD+ +G++P L ++ L +
Sbjct: 144 NGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLE 203
Query: 70 -----MEAQSERTKDTP 81
E++ E + DT
Sbjct: 204 NLQMLPESEDEESYDTE 220
Score = 44.5 bits (103), Expect = 1e-05
Identities = 11/91 (12%), Positives = 26/91 (28%), Gaps = 4/91 (4%)
Query: 281 GNSPLWLAANGGHLS----VVELLCKHGADIDSQDNRKVSCLMAAFRKGHVKAVRWMVNH 336
G+S L LA + V+ + A ++ Q+N + + L A + ++
Sbjct: 2 GDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGA 61
Query: 337 VAQFPSDQEMTRYIQTVNDKELLDKCQECSM 367
+ ++
Sbjct: 62 GCDPELRDFRGNTPLHLACEQGCLASVGVLT 92
Score = 41.0 bits (94), Expect = 2e-04
Identities = 19/107 (17%), Positives = 35/107 (32%), Gaps = 4/107 (3%)
Query: 249 DTALTIAADKGHCRF----VELLLSKGAQVEVKNKKGNSPLWLAANGGHLSVVELLCKHG 304
D+ L +A + + A + +N +PL LA + E L G
Sbjct: 3 DSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAG 62
Query: 305 ADIDSQDNRKVSCLMAAFRKGHVKAVRWMVNHVAQFPSDQEMTRYIQ 351
D + +D R + L A +G + +V + +
Sbjct: 63 CDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNY 109
Score = 35.6 bits (80), Expect = 0.010
Identities = 2/35 (5%), Positives = 7/35 (20%)
Query: 9 SNHDTALTLACAGGHEELVELLLSRGADIEHRDKK 43
+ L + + L + +
Sbjct: 176 YQGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPE 210
>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 153
Score = 66.8 bits (161), Expect = 1e-13
Identities = 47/152 (30%), Positives = 71/152 (46%), Gaps = 4/152 (2%)
Query: 149 PLMLAAMNGHTAAVKLLLDMGSDINAQIETNRNTALTLACFQGRHEVVSLLLDRKANVEH 208
L+ AA G V++L+ G+ + L LA G +LL + +
Sbjct: 5 KLLEAARAGQDDEVRILMANGAPFTTDW--LGTSPLHLAAQYGHFSTTEVLLRAGVSRDA 62
Query: 209 RAKTGLTPLMEAASGGYVEVGRVLLDKGADVNAPPVPSSRDTALTIAADKGHCRFVELLL 268
R K TPL AAS G+ + VLL GADVNA + + TAL A + H VELL+
Sbjct: 63 RTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDML--KMTALHWATEHNHQEVVELLI 120
Query: 269 SKGAQVEVKNKKGNSPLWLAANGGHLSVVELL 300
GA V ++K + ++ + G+ + E+L
Sbjct: 121 KYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152
Score = 64.5 bits (155), Expect = 7e-13
Identities = 35/153 (22%), Positives = 69/153 (45%), Gaps = 4/153 (2%)
Query: 13 TALTLACAGGHEELVELLLSRGADIEHRDKKGFTPLILAATAGHDKVVDILLNHKADMEA 72
L A G ++ V +L++ GA D G +P + A +L
Sbjct: 4 KKLLEAARAGQDDEVRILMANGAPF-TTDWLGTSP-LHLAAQYGHFSTTEVLLRAGVSRD 61
Query: 73 QSERTKDTPLSLACSGGRYEVVELLLTRGANKEHRNVSDYTPLSLAASGGYVNIIKLLLT 132
+ TPL +A S G +VE+LL GA+ +++ T L A + +++LL+
Sbjct: 62 ARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIK 121
Query: 133 HGAEINSRTGSKLGISPLMLAAMNGHTAAVKLL 165
+GA++++++ K + ++ NG+ ++L
Sbjct: 122 YGADVHTQS--KFCKTAFDISIDNGNEDLAEIL 152
Score = 57.2 bits (136), Expect = 2e-10
Identities = 37/147 (25%), Positives = 52/147 (35%), Gaps = 30/147 (20%)
Query: 215 TPLMEAASGGYVEVGRVLLDKGADVNAP------------------------------PV 244
L+EAA G + R+L+ GA
Sbjct: 4 KKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDAR 63
Query: 245 PSSRDTALTIAADKGHCRFVELLLSKGAQVEVKNKKGNSPLWLAANGGHLSVVELLCKHG 304
T L +AA +GH VE+LL GA V K+ + L A H VVELL K+G
Sbjct: 64 TKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYG 123
Query: 305 ADIDSQDNRKVSCLMAAFRKGHVKAVR 331
AD+ +Q + + G+
Sbjct: 124 ADVHTQSKFCKTAFDISIDNGNEDLAE 150
Score = 51.8 bits (122), Expect = 2e-08
Identities = 34/155 (21%), Positives = 57/155 (36%), Gaps = 6/155 (3%)
Query: 113 TPLSLAASGGYVNIIKLLLTHGAEINSRTGSKLGISPLMLAAMNGHTAAVKLLLDMGSDI 172
L AA G + +++L+ +GA + + T +
Sbjct: 4 KKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHFSTTEVL----LRAGVS 59
Query: 173 NAQIETNRNTALTLACFQGRHEVVSLLLDRKANVEHRAKTGLTPLMEAASGGYVEVGRVL 232
T L +A +G +V +LL A+V + +T L A + EV +L
Sbjct: 60 RDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELL 119
Query: 233 LDKGADVNAPPVPSSRDTALTIAADKGHCRFVELL 267
+ GADV+ TA I+ D G+ E+L
Sbjct: 120 IKYGADVHT--QSKFCKTAFDISIDNGNEDLAEIL 152
Score = 38.7 bits (88), Expect = 5e-04
Identities = 11/71 (15%), Positives = 20/71 (28%)
Query: 281 GNSPLWLAANGGHLSVVELLCKHGADIDSQDNRKVSCLMAAFRKGHVKAVRWMVNHVAQF 340
L AA G V +L +GA + +AA + V++
Sbjct: 2 LGKKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRD 61
Query: 341 PSDQEMTRYIQ 351
+ +
Sbjct: 62 ARTKVDRTPLH 72
Score = 31.0 bits (68), Expect = 0.21
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 9 SNHDTALTLACAGGHEELVELL 30
TA ++ G+E+L E+L
Sbjct: 131 KFCKTAFDISIDNGNEDLAEIL 152
>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId:
9606]}
Length = 156
Score = 60.3 bits (144), Expect = 2e-11
Identities = 33/157 (21%), Positives = 59/157 (37%), Gaps = 3/157 (1%)
Query: 13 TALTLACAGGHEELVELLLSRGADIEHRDKKGFTPLILAATAGHDKVVDILLNHKADMEA 72
L A A G E + LL ++ ++ G T L + + + +
Sbjct: 3 NELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPEIARRL--LLRGANPD 60
Query: 73 QSERTKDTPLSLACSGGRYEVVELLLTRGANKEHRNVSDYTPLSLAASGGYVNIIKLLLT 132
+RT + A G + ++ LL A+ + PL LAA G++ +++ L+
Sbjct: 61 LKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVK 120
Query: 133 HGAEINSRTGSKLGISPLMLAAMNGHTAAVKLLLDMG 169
H A + G + LA + G V L+ G
Sbjct: 121 HTASNVGHR-NHKGDTACDLARLYGRNEVVSLMQANG 156
Score = 59.1 bits (141), Expect = 5e-11
Identities = 40/157 (25%), Positives = 63/157 (40%), Gaps = 3/157 (1%)
Query: 148 SPLMLAAMNGHTAAVKLLLDMGSDINAQIETNRNTALTLACFQGRHEVVSLLLDRKANVE 207
+ L AA G + LL ++NAQ G E+ LL R AN +
Sbjct: 3 NELASAAARGDLEQLTSLLQNNVNVNAQ--NGFGRTALQVMKLGNPEIARRLLLRGANPD 60
Query: 208 HRAKTGLTPLMEAASGGYVEVGRVLLDKGADVNAPPVPSSRDTALTIAADKGHCRFVELL 267
+ +TG + +AA G+++ + LL+ ADVN + L L+
Sbjct: 61 LKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGH-LRVVEFLV 119
Query: 268 LSKGAQVEVKNKKGNSPLWLAANGGHLSVVELLCKHG 304
+ V +N KG++ LA G VV L+ +G
Sbjct: 120 KHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG 156
Score = 49.1 bits (115), Expect = 2e-07
Identities = 34/157 (21%), Positives = 53/157 (33%), Gaps = 3/157 (1%)
Query: 80 TPLSLACSGGRYEVVELLLTRGANKEHRNVSDYTPLSLAASGGYVNIIKLLLTHGAEINS 139
L+ A + G E + LL N +N T L + G + N
Sbjct: 3 NELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPEIARR---LLLRGANP 59
Query: 140 RTGSKLGISPLMLAAMNGHTAAVKLLLDMGSDINAQIETNRNTALTLACFQGRHEVVSLL 199
+ G + + AA G ++ LL+ +D+N + A V L+
Sbjct: 60 DLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLV 119
Query: 200 LDRKANVEHRAKTGLTPLMEAASGGYVEVGRVLLDKG 236
+NV HR G T A G EV ++ G
Sbjct: 120 KHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG 156
Score = 43.3 bits (100), Expect = 1e-05
Identities = 10/54 (18%), Positives = 22/54 (40%)
Query: 283 SPLWLAANGGHLSVVELLCKHGADIDSQDNRKVSCLMAAFRKGHVKAVRWMVNH 336
+ L AA G L + L ++ ++++Q+ + L A R ++
Sbjct: 3 NELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPEIARRLLLRG 56
Score = 43.0 bits (99), Expect = 2e-05
Identities = 18/127 (14%), Positives = 29/127 (22%)
Query: 250 TALTIAADKGHCRFVELLLSKGAQVEVKNKKGNSPLWLAANGGHLSVVELLCKHGADIDS 309
L AA +G + LL V +N G + L + G LL +
Sbjct: 3 NELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPEIARRLLLRGANPDLK 62
Query: 310 QDNRKVSCLMAAFRKGHVKAVRWMVNHVAQFPSDQEMTRYIQTVNDKELLDKCQECSMVI 369
AA + D E + + L +
Sbjct: 63 DRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHT 122
Query: 370 RVAKNQQ 376
+
Sbjct: 123 ASNVGHR 129
Score = 41.0 bits (94), Expect = 1e-04
Identities = 33/157 (21%), Positives = 52/157 (33%), Gaps = 4/157 (2%)
Query: 46 TPLILAATAGHDKVVDILLNHKADMEAQSERTKDTPLSLACSGGRYEVVELLLTRGANKE 105
L AA G + + LL + ++ AQ+ + + LL + +
Sbjct: 3 NELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPEIARRLLLRGANPDLK 62
Query: 106 HRNVSDYTPLSLAASGGYVNIIKLLLTHGAEINSRTGSKLGISPLMLAAMNGHTAAVKLL 165
R + A + + G PL LAA GH V+ L
Sbjct: 63 DRTGFAVIHDAARAGFLDTLQTL----LEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFL 118
Query: 166 LDMGSDINAQIETNRNTALTLACFQGRHEVVSLLLDR 202
+ + +TA LA GR+EVVSL+
Sbjct: 119 VKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQAN 155
Score = 40.6 bits (93), Expect = 1e-04
Identities = 37/156 (23%), Positives = 61/156 (39%), Gaps = 4/156 (2%)
Query: 182 TALTLACFQGRHEVVSLLLDRKANVEHRAKTGLTPLMEAASGGYVEVGRVLLDKGADVNA 241
L A +G E ++ LL NV + G T L G R+ N
Sbjct: 3 NELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPEIARRL---LLRGANP 59
Query: 242 PPVPSSRDTALTIAADKGHCRFVELLLSKGAQVEVKNKKGNSPLWLAANGGHL-SVVELL 300
+ + AA G ++ LL A V +++ +GN PL LAA GHL V L+
Sbjct: 60 DLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLV 119
Query: 301 CKHGADIDSQDNRKVSCLMAAFRKGHVKAVRWMVNH 336
+++ ++++ + A G + V M +
Sbjct: 120 KHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQAN 155
Score = 36.4 bits (82), Expect = 0.003
Identities = 10/26 (38%), Positives = 13/26 (50%)
Query: 9 SNHDTALTLACAGGHEELVELLLSRG 34
DTA LA G E+V L+ + G
Sbjct: 131 HKGDTACDLARLYGRNEVVSLMQANG 156
>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 154
Score = 58.8 bits (141), Expect = 6e-11
Identities = 24/135 (17%), Positives = 47/135 (34%), Gaps = 7/135 (5%)
Query: 211 KTGLTPLMEAASGGYVEVGRVLLDKGADVNAPPVPSSRD----TALTIAA---DKGHCRF 263
L L EA + G D+ ++ TAL +A D+
Sbjct: 4 AAKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHI 63
Query: 264 VELLLSKGAQVEVKNKKGNSPLWLAANGGHLSVVELLCKHGADIDSQDNRKVSCLMAAFR 323
V+ L+ ++ + KG++ L + ++LL + A I+ + + L A R
Sbjct: 64 VDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKR 123
Query: 324 KGHVKAVRWMVNHVA 338
H + ++
Sbjct: 124 LKHEHCEELLTQALS 138
Score = 55.4 bits (132), Expect = 8e-10
Identities = 24/132 (18%), Positives = 47/132 (35%), Gaps = 10/132 (7%)
Query: 13 TALTLACAGGHEELVELLLSRGADI------EHRDKKGFTPLILAATA---GHDKVVDIL 63
+L A + + G D+ + + T L LA + +VD L
Sbjct: 8 HSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFL 67
Query: 64 LNHKADMEAQSERTKDTPLSLACSGGRYEVVELLLTRGANKEHRNVSDYTPLSLAASGGY 123
+ + +++ Q+ + + + LL A+ E N S TPL +A +
Sbjct: 68 VQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLL-RGKASIEIANESGETPLDIAKRLKH 126
Query: 124 VNIIKLLLTHGA 135
+ +LL +
Sbjct: 127 EHCEELLTQALS 138
Score = 55.0 bits (131), Expect = 1e-09
Identities = 24/163 (14%), Positives = 47/163 (28%), Gaps = 33/163 (20%)
Query: 147 ISPLMLAAMNGHTAAVKLLLDMGSDINAQIETNRNTALTLACFQGRHEVVSLLLDRKANV 206
+ L A + G D+ +I +
Sbjct: 7 LHSLCEAVKTRDIFGLLQAYADGVDLTEKI----------------------------PL 38
Query: 207 EHRAKTGLTPLMEAA---SGGYVEVGRVLLDKGADVNAPPVPSSRDTALTIAADKGHCRF 263
+ + T L A + + L+ +++ S +
Sbjct: 39 ANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTAL--HYCCLTDNAEC 96
Query: 264 VELLLSKGAQVEVKNKKGNSPLWLAANGGHLSVVELLCKHGAD 306
++LLL A +E+ N+ G +PL +A H ELL + +
Sbjct: 97 LKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSG 139
Score = 38.0 bits (87), Expect = 8e-04
Identities = 10/36 (27%), Positives = 17/36 (47%)
Query: 34 GADIEHRDKKGFTPLILAATAGHDKVVDILLNHKAD 69
A IE ++ G TPL +A H+ ++L +
Sbjct: 104 KASIEIANESGETPLDIAKRLKHEHCEELLTQALSG 139
Score = 33.0 bits (74), Expect = 0.044
Identities = 8/27 (29%), Positives = 12/27 (44%)
Query: 10 NHDTALTLACAGGHEELVELLLSRGAD 36
+ +T L +A HE ELL +
Sbjct: 113 SGETPLDIAKRLKHEHCEELLTQALSG 139
>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 130
Score = 57.8 bits (138), Expect = 1e-10
Identities = 25/128 (19%), Positives = 48/128 (37%), Gaps = 2/128 (1%)
Query: 148 SPLMLAAMNGHTAAVKLLLDMGSDINAQIETNRNTALTLACFQGRHEVVSLLLDRKANVE 207
+ L+ +++ G V+ ++ D + + C V L+ NV
Sbjct: 3 ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKF-LVQFGVNVN 61
Query: 208 HRAKTGLTPLMEAASGGYVEVGRVLLDKGADVNAPPVPSSRD-TALTIAADKGHCRFVEL 266
G TPL AAS V+V + L++ GA V A + ++G+ + +
Sbjct: 62 AADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQF 121
Query: 267 LLSKGAQV 274
L ++
Sbjct: 122 LYGVQEKM 129
Score = 52.8 bits (125), Expect = 5e-09
Identities = 18/129 (13%), Positives = 49/129 (37%), Gaps = 5/129 (3%)
Query: 214 LTPLMEAASGGYVEVGRVLLDKGADVNAPPVPSSRDTALTIAADKGHCRFVELLLSKGAQ 273
L L++++ G ++ + ++ + D + P + A + G
Sbjct: 2 LALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFL--VQFGVN 59
Query: 274 VEVKNKKGNSPLWLAANGGHLSVVELLCKHGADIDSQDN---RKVSCLMAAFRKGHVKAV 330
V + G +PL AA+ ++ V + L + GA + + + + +G+ +
Sbjct: 60 VNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCS 119
Query: 331 RWMVNHVAQ 339
+++ +
Sbjct: 120 QFLYGVQEK 128
Score = 51.2 bits (121), Expect = 1e-08
Identities = 24/128 (18%), Positives = 40/128 (31%), Gaps = 4/128 (3%)
Query: 13 TALTLACAGGHEELVELLLSRGADIEHRDKKGFTPLILAATAGHDKVVDILLNHKADMEA 72
L + G +LV+ ++ D + +G T L A + L
Sbjct: 3 ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALH-NAVCAGHTEIVKFLVQFGVNVN 61
Query: 73 QSERTKDTPLSLACSGGRYEVVELLLTRGANKEHRNVSDY---TPLSLAASGGYVNIIKL 129
++ TPL A S +V + L+ GA SD GY +
Sbjct: 62 AADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQF 121
Query: 130 LLTHGAEI 137
L ++
Sbjct: 122 LYGVQEKM 129
Score = 48.1 bits (113), Expect = 2e-07
Identities = 16/132 (12%), Positives = 41/132 (31%), Gaps = 9/132 (6%)
Query: 114 PLSL---AASGGYVNIIKLLLTHGAEINSRTGSKLGISPLMLAAMNGHTAAVKLLLDMGS 170
PL+L ++ G ++++ ++ + + + + A +
Sbjct: 1 PLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFL---VQFG 57
Query: 171 DINAQIETNRNTALTLACFQGRHEVVSLLLDRKANVEHRAKTGL---TPLMEAASGGYVE 227
+++ T L A +V L++ A V + + E GY +
Sbjct: 58 VNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQ 117
Query: 228 VGRVLLDKGADV 239
+ L +
Sbjct: 118 CSQFLYGVQEKM 129
Score = 37.0 bits (84), Expect = 0.001
Identities = 7/38 (18%), Positives = 13/38 (34%), Gaps = 2/38 (5%)
Query: 2 DVDSETESNHDTALTLACA--GGHEELVELLLSRGADI 37
V + T S+ TA G+ + + L +
Sbjct: 92 AVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKM 129
Score = 33.9 bits (76), Expect = 0.017
Identities = 10/85 (11%), Positives = 28/85 (32%)
Query: 283 SPLWLAANGGHLSVVELLCKHGADIDSQDNRKVSCLMAAFRKGHVKAVRWMVNHVAQFPS 342
+ L ++ G +V+ + D ++ ++ L A GH + V+++V +
Sbjct: 3 ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNA 62
Query: 343 DQEMTRYIQTVNDKELLDKCQECSM 367
+ + +
Sbjct: 63 ADSDGWTPLHCAASCNNVQVCKFLV 87
>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo
sapiens) [TaxId: 9606]}
Length = 156
Score = 51.0 bits (120), Expect = 3e-08
Identities = 31/156 (19%), Positives = 64/156 (41%), Gaps = 6/156 (3%)
Query: 13 TALTLACAGGHEELVELLLSR-GADIEHRDKKGFTPLILAATAGHDKVVDILLNHKADME 71
L+ A A G + V LL R + ++ G T L + +++ +
Sbjct: 4 DRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALEL--LKQGASP 61
Query: 72 AQSERTKDTPLSLACSGGRYEVVELLLTRGANKEHRNVSDYTPLSLAASGGYVNIIKLLL 131
+ + +P+ A G + +++L+ GA+ + + P+ LA G+ ++ L
Sbjct: 62 NVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLA 121
Query: 132 THGAEINSRTGSKLGISPLMLAAMNGHTAAVKLLLD 167
++++ R G++PL LA G V +L
Sbjct: 122 -AESDLHRRD--ARGLTPLELALQRGAQDLVDILQG 154
Score = 50.2 bits (118), Expect = 6e-08
Identities = 36/156 (23%), Positives = 65/156 (41%), Gaps = 6/156 (3%)
Query: 149 PLMLAAMNGHTAAVKLLLDM-GSDINAQIETNRNTALTLACFQGRHEVVSLLLDRKANVE 207
L AA G V+ LL +A + + + L + A+
Sbjct: 5 RLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALELL--KQGASPN 62
Query: 208 HRAKTGLTPLMEAASGGYVEVGRVLLDKGADVNAPPVPSSRDTALTIAADKGHCRFVELL 267
+ +G +P+ +AA G+++ +VL++ GADVN VP A + V
Sbjct: 63 VQDTSGTSPVHDAARTGFLDTLKVLVEHGADVN---VPDGTGALPIHLAVQEGHTAVVSF 119
Query: 268 LSKGAQVEVKNKKGNSPLWLAANGGHLSVVELLCKH 303
L+ + + ++ +G +PL LA G +V++L H
Sbjct: 120 LAAESDLHRRDARGLTPLELALQRGAQDLVDILQGH 155
Score = 46.7 bits (109), Expect = 8e-07
Identities = 33/158 (20%), Positives = 57/158 (36%), Gaps = 5/158 (3%)
Query: 181 NTALTLACFQGRHEVVSLLLDRK-ANVEHRAKTGLTPLMEAASGGYVEVGRVLLDKGADV 239
L+ A +G + V LL R+ + + + G T L G +L +
Sbjct: 3 GDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALELLKQGASPN 62
Query: 240 NAPPVPSSRDTALTIAADKGHCRFVELLLSKGAQVEVKNKKGNSPLWLAANGGHLSVVEL 299
+S + + GA V V + G P+ LA GH +VV
Sbjct: 63 VQDTSGTSPVHDAARTGFLDTLKVLV---EHGADVNVPDGTGALPIHLAVQEGHTAVVSF 119
Query: 300 LCKHGADIDSQDNRKVSCLMAAFRKGHVKAVRWMVNHV 337
+D+ +D R ++ L A ++G V + H+
Sbjct: 120 -LAAESDLHRRDARGLTPLELALQRGAQDLVDILQGHM 156
Score = 46.3 bits (108), Expect = 1e-06
Identities = 15/32 (46%), Positives = 19/32 (59%)
Query: 35 ADIEHRDKKGFTPLILAATAGHDKVVDILLNH 66
+D+ RD +G TPL LA G +VDIL H
Sbjct: 124 SDLHRRDARGLTPLELALQRGAQDLVDILQGH 155
Score = 37.5 bits (85), Expect = 0.001
Identities = 42/160 (26%), Positives = 72/160 (45%), Gaps = 7/160 (4%)
Query: 43 KGFTPLILAATAGHDKVVDILL-NHKADMEAQSERTKDTPLSLACSGGRYEVVELLLTRG 101
+ L AA G + V LL +A + K + + L +G
Sbjct: 1 RAGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALELL--KQG 58
Query: 102 ANKEHRNVSDYTPLSLAASGGYVNIIKLLLTHGAEINSRTGSKLGISPLMLAAMNGHTAA 161
A+ ++ S +P+ AA G+++ +K+L+ HGA++N G+ G P+ LA GHTA
Sbjct: 59 ASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGT--GALPIHLAVQEGHTAV 116
Query: 162 VKLLLDMGSDINAQIETNRNTALTLACFQGRHEVVSLLLD 201
V L D++ + + T L LA +G ++V +L
Sbjct: 117 VSFLAAES-DLHRR-DARGLTPLELALQRGAQDLVDILQG 154
Score = 37.5 bits (85), Expect = 0.002
Identities = 14/89 (15%), Positives = 25/89 (28%), Gaps = 1/89 (1%)
Query: 280 KGNSPLWLAANGGHLSVV-ELLCKHGADIDSQDNRKVSCLMAAFRKGHVKAVRWMVNHVA 338
+ L AA G + V LL + D+ + + L A+ + +
Sbjct: 1 RAGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALELLKQGAS 60
Query: 339 QFPSDQEMTRYIQTVNDKELLDKCQECSM 367
D T + LD +
Sbjct: 61 PNVQDTSGTSPVHDAARTGFLDTLKVLVE 89
Score = 32.5 bits (72), Expect = 0.069
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 9 SNHDTALTLACAGGHEELVELLLS 32
+ T L LA G ++LV++L
Sbjct: 131 ARGLTPLELALQRGAQDLVDILQG 154
>d1sa0e_ a.137.10.1 (E:) Stathmin 4 {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 138
Score = 43.3 bits (102), Expect = 9e-06
Identities = 22/100 (22%), Positives = 41/100 (41%)
Query: 397 REESKRAAQARKRERKKQKKLEKKEEKRKAMEEEEEVIRVAKNQQAERANKNANILLEEL 456
R + +K E ++++ ++ E K + E+ E R + E N + E+L
Sbjct: 39 RRDPSLEEIQKKLEAAEERRKYQEAELLKHLAEKREHEREVIQKAIEENNNFIKMAKEKL 98
Query: 457 DMEKWREESKRAAQARKRERKKQKKLEKKEEKRKAMEEEE 496
+ + R A + Q+K + EE RK E +E
Sbjct: 99 AQKMESNKENREAHLAAMLERLQEKDKHAEEVRKNKELKE 138
Score = 36.0 bits (83), Expect = 0.003
Identities = 14/117 (11%), Positives = 37/117 (31%)
Query: 397 REESKRAAQARKRERKKQKKLEKKEEKRKAMEEEEEVIRVAKNQQAERANKNANILLEEL 456
+ S +++ +E ++K EE A K +
Sbjct: 22 KPPSFDGVPEFNASLPRRRDPSLEEIQKKLEAAEERRKYQEAELLKHLAEKREHEREVIQ 81
Query: 457 DMEKWREESKRAAQARKRERKKQKKLEKKEEKRKAMEEEEEEEEEVEVQEVEGEMME 513
+ + A+ + ++ + K ++ +E +E+++ E E+ E
Sbjct: 82 KAIEENNNFIKMAKEKLAQKMESNKENREAHLAAMLERLQEKDKHAEEVRKNKELKE 138
Score = 32.2 bits (73), Expect = 0.070
Identities = 19/76 (25%), Positives = 28/76 (36%)
Query: 356 KELLDKCQECSMVIRVAKNQQAERANKNANILLEELDMEKWREESKRAAQARKRERKKQK 415
ELL E R + E N + E+L + + R A + Q+
Sbjct: 63 AELLKHLAEKREHEREVIQKAIEENNNFIKMAKEKLAQKMESNKENREAHLAAMLERLQE 122
Query: 416 KLEKKEEKRKAMEEEE 431
K + EE RK E +E
Sbjct: 123 KDKHAEEVRKNKELKE 138
Score = 31.8 bits (72), Expect = 0.095
Identities = 11/64 (17%), Positives = 19/64 (29%)
Query: 459 EKWREESKRAAQARKRERKKQKKLEKKEEKRKAMEEEEEEEEEVEVQEVEGEMMEEETEE 518
+K +R K + + E + EE +E + ME E
Sbjct: 49 KKLEAAEERRKYQEAELLKHLAEKREHEREVIQKAIEENNNFIKMAKEKLAQKMESNKEN 108
Query: 519 NDMH 522
+ H
Sbjct: 109 REAH 112
Score = 29.5 bits (66), Expect = 0.54
Identities = 14/76 (18%), Positives = 28/76 (36%)
Query: 375 QQAERANKNANILLEELDMEKWREESKRAAQARKRERKKQKKLEKKEEKRKAMEEEEEVI 434
ER LL+ L ++ E + + EK +K ++ +E E
Sbjct: 53 AAEERRKYQEAELLKHLAEKREHEREVIQKAIEENNNFIKMAKEKLAQKMESNKENREAH 112
Query: 435 RVAKNQQAERANKNAN 450
A ++ + +K+A
Sbjct: 113 LAAMLERLQEKDKHAE 128
Score = 28.3 bits (63), Expect = 1.5
Identities = 19/77 (24%), Positives = 30/77 (38%), Gaps = 1/77 (1%)
Query: 372 AKNQQAERANKNANILLEELDMEKWREESKRAAQARKRERKKQKKLEKKEEKRKAMEEEE 431
K Q+AE A E ++ + E +E+ Q K+E +E R+A
Sbjct: 58 RKYQEAELLKHLAEKREHEREVIQKAIEENNNFIKMAKEKLAQ-KMESNKENREAHLAAM 116
Query: 432 EVIRVAKNQQAERANKN 448
K++ AE KN
Sbjct: 117 LERLQEKDKHAEEVRKN 133
>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo
sapiens) [TaxId: 9606]}
Length = 125
Score = 43.0 bits (99), Expect = 1e-05
Identities = 32/119 (26%), Positives = 49/119 (41%), Gaps = 1/119 (0%)
Query: 13 TALTLACAGGHEELVELLLSRGADIEHRDKKGFTPLILAATAGHDKVVDILLNHKADMEA 72
L A A G E V LL GA+ + G P I G +V ++LL H A+
Sbjct: 5 DWLATAAARGRVEEVRALLEAGANPNAPNSYGRRP-IQVMMMGSARVAELLLLHGAEPNC 63
Query: 73 QSERTKDTPLSLACSGGRYEVVELLLTRGANKEHRNVSDYTPLSLAASGGYVNIIKLLL 131
T P+ A G + + +L GA + R+ P+ LA G+ ++ + L
Sbjct: 64 ADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLR 122
Score = 42.2 bits (97), Expect = 2e-05
Identities = 18/121 (14%), Positives = 35/121 (28%), Gaps = 3/121 (2%)
Query: 149 PLMLAAMNGHTAAVKLLLDMGSDINAQIETNRNTALTLACFQGRHEVVSLLLDRKANVEH 208
L AA G V+ LL+ G++ NA R + R + +
Sbjct: 6 WLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGSARVAELL---LLHGAEPN 62
Query: 209 RAKTGLTPLMEAASGGYVEVGRVLLDKGADVNAPPVPSSRDTALTIAADKGHCRFVELLL 268
A + + +++ A + + +A + GH L
Sbjct: 63 CADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLR 122
Query: 269 S 269
+
Sbjct: 123 A 123
Score = 41.5 bits (95), Expect = 3e-05
Identities = 25/122 (20%), Positives = 45/122 (36%), Gaps = 3/122 (2%)
Query: 113 TPLSLAASGGYVNIIKLLLTHGAEINSRTGSKLGISPLMLAAMNGHTAAVKLLLDMGSDI 172
L+ AA+ G V ++ LL GA N+ +M+ + G++
Sbjct: 5 DWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGSARVAELLL---LHGAEP 61
Query: 173 NAQIETNRNTALTLACFQGRHEVVSLLLDRKANVEHRAKTGLTPLMEAASGGYVEVGRVL 232
N + A +G + + +L A ++ R G P+ A G+ +V R L
Sbjct: 62 NCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYL 121
Query: 233 LD 234
Sbjct: 122 RA 123
Score = 40.7 bits (93), Expect = 7e-05
Identities = 24/122 (19%), Positives = 34/122 (27%), Gaps = 3/122 (2%)
Query: 46 TPLILAATAGHDKVVDILLNHKADMEAQSERTKDTPLSLACSGGRYEVVELLLTRGANKE 105
L AA G + V LL A+ A + + + R + LL N
Sbjct: 5 DWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGSARVAELLLLHGAEPNCA 64
Query: 106 HRNVSDYTPLSLAASGGYVNIIKLLLTHGAEINSRTGSKLGISPLMLAAMNGHTAAVKLL 165
A G ++ H A G P+ LA GH + L
Sbjct: 65 DPATLTRPVHDAAREGFLDTLVV---LHRAGARLDVRDAWGRLPVDLAEELGHRDVARYL 121
Query: 166 LD 167
Sbjct: 122 RA 123
Score = 38.4 bits (87), Expect = 4e-04
Identities = 29/119 (24%), Positives = 43/119 (36%), Gaps = 2/119 (1%)
Query: 182 TALTLACFQGRHEVVSLLLDRKANVEHRAKTGLTPLMEAASGGYVEVGRVLLDKGADVNA 241
L A +GR E V LL+ AN A LL
Sbjct: 5 DWLATAAARGRVEEVRALLEAGAN--PNAPNSYGRRPIQVMMMGSARVAELLLLHGAEPN 62
Query: 242 PPVPSSRDTALTIAADKGHCRFVELLLSKGAQVEVKNKKGNSPLWLAANGGHLSVVELL 300
P++ + AA +G + +L GA+++V++ G P+ LA GH V L
Sbjct: 63 CADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYL 121
Score = 33.4 bits (74), Expect = 0.020
Identities = 10/28 (35%), Positives = 12/28 (42%)
Query: 38 EHRDKKGFTPLILAATAGHDKVVDILLN 65
+ RD G P+ LA GH V L
Sbjct: 96 DVRDAWGRLPVDLAEELGHRDVARYLRA 123
Score = 33.4 bits (74), Expect = 0.027
Identities = 11/98 (11%), Positives = 27/98 (27%)
Query: 279 KKGNSPLWLAANGGHLSVVELLCKHGADIDSQDNRKVSCLMAAFRKGHVKAVRWMVNHVA 338
+ L AA G + V L + GA+ ++ ++ + A +++
Sbjct: 1 EPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGSARVAELLLLHGAE 60
Query: 339 QFPSDQEMTRYIQTVNDKELLDKCQECSMVIRVAKNQQ 376
+D +E + +
Sbjct: 61 PNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVR 98
Score = 32.2 bits (71), Expect = 0.059
Identities = 5/32 (15%), Positives = 11/32 (34%)
Query: 1 MDVDSETESNHDTALTLACAGGHEELVELLLS 32
++ + LA GH ++ L +
Sbjct: 92 GARLDVRDAWGRLPVDLAEELGHRDVARYLRA 123
>d1f5na1 a.114.1.1 (A:284-583) Interferon-induced guanylate-binding
protein 1 (GBP1), C-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 300
Score = 40.1 bits (93), Expect = 4e-04
Identities = 19/143 (13%), Positives = 55/143 (38%), Gaps = 4/143 (2%)
Query: 375 QQAERANKNANILLEELDMEKWREESKRAAQARKRERKKQKKLEKKEEKRKAMEEEEEVI 434
++ I EE+ + + + ++ +K ++ E +R E +
Sbjct: 161 KKKYYEEPRKGIQAEEILQTYLKSKESMTDAILQTDQTLTEKEKEIEVERVKAESAQASA 220
Query: 435 RVAKNQQAERANKNANILLEELDMEKWREESKRAAQARKRERKKQKKLEKKEEKRKAMEE 494
++ Q + E E ++ +++ R + K+Q++ K + E+
Sbjct: 221 KMLHEMQRKNEQMMEQK--ERSYQEHLKQLTEKMENDRVQLLKEQERTL--ALKLQEQEQ 276
Query: 495 EEEEEEEVEVQEVEGEMMEEETE 517
+E + E + ++ E+ + +T+
Sbjct: 277 LLKEGFQKESRIMKNEIQDLQTK 299
Score = 36.6 bits (84), Expect = 0.006
Identities = 21/166 (12%), Positives = 49/166 (29%), Gaps = 2/166 (1%)
Query: 356 KELLDKCQECSMVIRVAKNQQAERANKNANILLEELDMEKWREESKRAAQARKRERKKQK 415
K+ + + + E K ++ + + RK +
Sbjct: 114 KQNQEASSDRCSGLLQVIFSPLEEEVKAGIYSKPGGYRLFVQKLQDLKKKYYEEPRKGIQ 173
Query: 416 KLEKKEEKRKAMEEEEEVIRVAKNQQAERANKNANILLEELDMEKWREESKRAAQARKRE 475
E + K+ E + I + Q + + RK E
Sbjct: 174 AEEILQTYLKSKESMTDAIL--QTDQTLTEKEKEIEVERVKAESAQASAKMLHEMQRKNE 231
Query: 476 RKKQKKLEKKEEKRKAMEEEEEEEEEVEVQEVEGEMMEEETEENDM 521
+ ++K +E K + E+ E + ++E E + + E+ +
Sbjct: 232 QMMEQKERSYQEHLKQLTEKMENDRVQLLKEQERTLALKLQEQEQL 277
Score = 32.8 bits (74), Expect = 0.096
Identities = 11/118 (9%), Positives = 42/118 (35%), Gaps = 5/118 (4%)
Query: 344 QEMTRYIQTVNDKELLDKCQECSMVIRVAKNQQAERANKNANILLEEL-----DMEKWRE 398
+ + + +E + + K + A+ + K + + + E+ +
Sbjct: 183 KSKESMTDAILQTDQTLTEKEKEIEVERVKAESAQASAKMLHEMQRKNEQMMEQKERSYQ 242
Query: 399 ESKRAAQARKRERKKQKKLEKKEEKRKAMEEEEEVIRVAKNQQAERANKNANILLEEL 456
E + + + Q E++ ++E+E++++ +++ L ++
Sbjct: 243 EHLKQLTEKMENDRVQLLKEQERTLALKLQEQEQLLKEGFQKESRIMKNEIQDLQTKM 300
Score = 28.9 bits (64), Expect = 1.7
Identities = 23/150 (15%), Positives = 53/150 (35%), Gaps = 4/150 (2%)
Query: 373 KNQQAERANKNANILLEELDMEKWREESKRAAQARKRERKKQKKLEKKEEKRKAMEEEEE 432
K A+ K + + + R E + + + K + ++ +
Sbjct: 99 KELAAQLEKKRDDFCKQNQEASSDRCSGLLQVIFSPLEEEVKAGIYSKPGGYRLFVQKLQ 158
Query: 433 VIRVAKNQQAERANKNANILLEELDMEKWREESKRAAQARKRERKKQKKLEKKEEKRKAM 492
++ ++ + + IL L +ES A + + +K+ E + E+ KA
Sbjct: 159 DLKKKYYEEPRKGIQAEEILQTYLK----SKESMTDAILQTDQTLTEKEKEIEVERVKAE 214
Query: 493 EEEEEEEEEVEVQEVEGEMMEEETEENDMH 522
+ + E+Q +MME++ H
Sbjct: 215 SAQASAKMLHEMQRKNEQMMEQKERSYQEH 244
>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 118
Score = 35.6 bits (80), Expect = 0.003
Identities = 32/120 (26%), Positives = 51/120 (42%), Gaps = 5/120 (4%)
Query: 12 DTALTLACAGGHEELVELLLSRGADIEHRDKKGFTPLILAATAGHDKVVDILLNHKADME 71
D A G + V+ +++G D+ + G PL AA G ++++ LL AD+
Sbjct: 3 DKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADIN 62
Query: 72 AQSERTKDTPLSLACSGGRYEVVELLLTRGANKEHRNVSDYTPLSLAASGGYVNIIKLLL 131
A + A G V+LLL++GA+K + T L + IK LL
Sbjct: 63 APDKHHITPL-LSAVYEGHVSCVKLLLSKGADKTVKGPDGLTALEATDN----QAIKALL 117
Score = 31.4 bits (69), Expect = 0.088
Identities = 6/20 (30%), Positives = 7/20 (35%)
Query: 149 PLMLAAMNGHTAAVKLLLDM 168
M A NG VK +
Sbjct: 5 EFMWALKNGDLDEVKDYVAK 24
Score = 30.6 bits (67), Expect = 0.16
Identities = 38/120 (31%), Positives = 51/120 (42%), Gaps = 5/120 (4%)
Query: 181 NTALTLACFQGRHEVVSLLLDRKANVEHRAKTGLTPLMEAASGGYVEVGRVLLDKGADVN 240
+ A G + V + + +V + G PL AA G +E+ LL KGAD+N
Sbjct: 3 DKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADIN 62
Query: 241 APPVPSSRDTALTIAADKGHCRFVELLLSKGAQVEVKNKKGNSPLWLAANGGHLSVVELL 300
AP A +GH V+LLLSKGA VK G + L N + LL
Sbjct: 63 APDKHHITPL--LSAVYEGHVSCVKLLLSKGADKTVKGPDGLTALEATDNQA---IKALL 117
Score = 30.3 bits (66), Expect = 0.21
Identities = 10/117 (8%), Positives = 22/117 (18%), Gaps = 8/117 (6%)
Query: 281 GNSPLWLAANGGHLSVVELLCKH---GADIDSQDNRKVSCLMAAFRKGHVKAVRWMVNHV 337
+ A G L V+ + + + ++ + +
Sbjct: 2 CDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADI 61
Query: 338 AQFPSDQEMTRYIQTVNDKELLDKCQECSMVIRVAKNQQAERA-----NKNANILLE 389
K + K A N+ LL+
Sbjct: 62 NAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTALEATDNQAIKALLQ 118
Score = 29.5 bits (64), Expect = 0.48
Identities = 18/115 (15%), Positives = 33/115 (28%), Gaps = 3/115 (2%)
Query: 113 TPLSLAASGGYVNIIKLLLTHGAEINSRTGSKLGISPLMLAAMNGHTAAVKLLLDMGSDI 172
A G ++ +K + G ++N +
Sbjct: 4 KEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFL---LLKGAD 60
Query: 173 NAQIETNRNTALTLACFQGRHEVVSLLLDRKANVEHRAKTGLTPLMEAASGGYVE 227
+ + T L A ++G V LLL + A+ + GLT L +
Sbjct: 61 INAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTALEATDNQAIKA 115
Score = 29.1 bits (63), Expect = 0.65
Identities = 27/88 (30%), Positives = 45/88 (51%)
Query: 249 DTALTIAADKGHCRFVELLLSKGAQVEVKNKKGNSPLWLAANGGHLSVVELLCKHGADID 308
D A G V+ ++KG V + G PL AA+ G L ++E L GADI+
Sbjct: 3 DKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADIN 62
Query: 309 SQDNRKVSCLMAAFRKGHVKAVRWMVNH 336
+ D ++ L++A +GHV V+ +++
Sbjct: 63 APDKHHITPLLSAVYEGHVSCVKLLLSK 90
Score = 28.7 bits (62), Expect = 0.83
Identities = 27/114 (23%), Positives = 42/114 (36%), Gaps = 2/114 (1%)
Query: 215 TPLMEAASGGYVEVGRVLLDKGADVNAPPVPSSRDTALTIAADKGHCRFVELLLSKGAQV 274
M A G ++ + + KG DVN + + L KGA +
Sbjct: 4 KEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFL--LLKGADI 61
Query: 275 EVKNKKGNSPLWLAANGGHLSVVELLCKHGADIDSQDNRKVSCLMAAFRKGHVK 328
+K +PL A GH+S V+LL GAD + ++ L A +
Sbjct: 62 NAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTALEATDNQAIKA 115
>d2es4d1 a.137.15.1 (D:53-332) Lipase chaperone LifO (LipB)
{Burkholderia glumae [TaxId: 337]}
Length = 280
Score = 36.9 bits (85), Expect = 0.005
Identities = 15/151 (9%), Positives = 45/151 (29%), Gaps = 3/151 (1%)
Query: 370 RVAKNQQAERANKNANILLEELDMEKWREESKRAAQARKRERKKQKKLEKKE-EKRKAME 428
V ++ A + A L E +R+++ LE+ +
Sbjct: 95 AVLGDKLDPAAMQLALDQRAALADRTLGEW--AEPFFGDEQRRQRHDLERIRIANDTTLS 152
Query: 429 EEEEVIRVAKNQQAERANKNANILLEELDMEKWREESKRAAQARKRERKKQKKLEKKEEK 488
E++ R+A ++ A + + + ++ + + + +
Sbjct: 153 PEQKAARLAALDAQLTPDERAQQAALHAQQDAVTKIADLQKAGATPDQMRAQIAQTLGPE 212
Query: 489 RKAMEEEEEEEEEVEVQEVEGEMMEEETEEN 519
A + ++++E + E +
Sbjct: 213 AAARAAQMQQDDEAWQTRYQAYAAERDRIAA 243
Score = 34.2 bits (78), Expect = 0.029
Identities = 16/113 (14%), Positives = 40/113 (35%)
Query: 372 AKNQQAERANKNANILLEELDMEKWREESKRAAQARKRERKKQKKLEKKEEKRKAMEEEE 431
A+ ERA + A ++ + + A + R + Q + + M++++
Sbjct: 165 AQLTPDERAQQAALHAQQDAVTKIADLQKAGATPDQMRAQIAQTLGPEAAARAAQMQQDD 224
Query: 432 EVIRVAKNQQAERANKNANILLEELDMEKWREESKRAAQARKRERKKQKKLEK 484
E + A ++ A L D + + ++ E + L++
Sbjct: 225 EAWQTRYQAYAAERDRIAAQGLAPQDRDARIAQLRQQTFTAPGEAIRAASLDR 277
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus
thermophilus [TaxId: 274]}
Length = 387
Score = 33.9 bits (77), Expect = 0.046
Identities = 31/192 (16%), Positives = 73/192 (38%), Gaps = 26/192 (13%)
Query: 329 AVRWMVNHVAQFPSDQEMTRYIQTVNDKELLDKCQECSMVIRVAKNQQAERANKNANILL 388
A+ ++ +++ + + +D E + +R+A E +
Sbjct: 212 AIIAAATLSHRYITERRLPD--------KAIDLIDEAAARLRMALESAPEE--------I 255
Query: 389 EELDMEKWREESKRAAQARKRERKKQKKLEKKEEKRKAMEEEEEVIRVAKNQQAERANKN 448
+ L+ +K + E +R A ++++ Q++L+ E + + EE +R A+ ++ +
Sbjct: 256 DALERKKLQLEIEREALKKEKDPDSQERLKAIEAEIAKLTEEIAKLR-AEWEREREILRK 314
Query: 449 ANILLEELDMEKWREESKRAAQARKRERKKQKKLEKKEEKRKAMEEEEEEEEEVEVQEVE 508
LD E +R + +R+ + E + + +E E E E +
Sbjct: 315 LREAQHRLD------EVRREIELAERQYDLNRAAELRYGELPKLEAEVEALSE---KLRG 365
Query: 509 GEMMEEETEEND 520
+ E E D
Sbjct: 366 ARFVRLEVTEED 377
>d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding
protein LAV1-2) {Physarum polycephalum [TaxId: 5791]}
Length = 321
Score = 31.1 bits (69), Expect = 0.37
Identities = 16/119 (13%), Positives = 42/119 (35%), Gaps = 15/119 (12%)
Query: 415 KKLEKKEEKRKAMEEE---------------EEVIRVAKNQQAERANKNANILLEELDME 459
++L ++E K + E +E + Q A++ + L E
Sbjct: 5 QELTQREANVKKVHENLEELQKKLDHTSFAHKEDRDRLEAQIAQKEQEQKAKLAEYDQKV 64
Query: 460 KWREESKRAAQARKRERKKQKKLEKKEEKRKAMEEEEEEEEEVEVQEVEGEMMEEETEE 518
+ +++ A+ + + EK+ + E++ ++ + + EE+T
Sbjct: 65 QNEFDARERAEREREAARGDAAAEKQRLASLLKDLEDDASGYNRLRPSKPMLSEEDTNI 123
>d1k4ta3 e.15.1.1 (A:201-430) Eukaryotic DNA topoisomerase I,
N-terminal DNA-binding fragment {Human (Homo sapiens)
[TaxId: 9606]}
Length = 230
Score = 30.5 bits (69), Expect = 0.41
Identities = 10/35 (28%), Positives = 17/35 (48%)
Query: 475 ERKKQKKLEKKEEKRKAMEEEEEEEEEVEVQEVEG 509
+ + +K KEEK K EE E+ +E ++
Sbjct: 111 AQTEARKQMSKEEKLKIKEENEKLLKEYGFCIMDN 145
Score = 27.4 bits (61), Expect = 4.1
Identities = 8/33 (24%), Positives = 18/33 (54%)
Query: 480 KKLEKKEEKRKAMEEEEEEEEEVEVQEVEGEMM 512
+ + + E RK M +EE+ + + E +++ E
Sbjct: 107 QYFKAQTEARKQMSKEEKLKIKEENEKLLKEYG 139
Score = 27.4 bits (61), Expect = 4.4
Identities = 8/28 (28%), Positives = 15/28 (53%)
Query: 405 QARKRERKKQKKLEKKEEKRKAMEEEEE 432
+A+ RK+ K EK + K + + +E
Sbjct: 110 KAQTEARKQMSKEEKLKIKEENEKLLKE 137
Score = 27.0 bits (60), Expect = 5.5
Identities = 6/36 (16%), Positives = 16/36 (44%)
Query: 392 DMEKWREESKRAAQARKRERKKQKKLEKKEEKRKAM 427
M ++ + A + +E K + K E ++ ++
Sbjct: 104 QMSQYFKAQTEARKQMSKEEKLKIKEENEKLLKEYG 139
Score = 27.0 bits (60), Expect = 5.5
Identities = 6/36 (16%), Positives = 16/36 (44%)
Query: 457 DMEKWREESKRAAQARKRERKKQKKLEKKEEKRKAM 492
M ++ + A + +E K + K E ++ ++
Sbjct: 104 QMSQYFKAQTEARKQMSKEEKLKIKEENEKLLKEYG 139
>d2efka1 a.238.1.4 (A:10-288) CDC42-interacting protein 4, CIP4
{Human (Homo sapiens) [TaxId: 9606]}
Length = 279
Score = 30.6 bits (68), Expect = 0.48
Identities = 25/165 (15%), Positives = 64/165 (38%), Gaps = 14/165 (8%)
Query: 363 QECSMVIRVAKNQQAERANKNANILLEELDME------KWREESKRAAQARKRERKKQKK 416
Q+ + I N A + A L + +E + ++E K Q +R +++ +
Sbjct: 61 QQSFVQILQEVNDFAGQRELVAENLSVRVCLELTKYSQEMKQERKMHFQEGRRAQQQLEN 120
Query: 417 LEKKEEKRKAMEEEEEVIRVAKNQQAERANKNANILLEELDMEKWREESKRAAQARKRER 476
K+ E K E + ++AE+A + A L ++++ K + K QA R
Sbjct: 121 GFKQLENSKRKFERDC-------REAEKAAQTAERLDQDINATK-ADVEKAKQQAHLRSH 172
Query: 477 KKQKKLEKKEEKRKAMEEEEEEEEEVEVQEVEGEMMEEETEENDM 521
++ + + + ++ ++ ++ ++ + +
Sbjct: 173 MAEESKNEYAAQLQRFNRDQAHFYFSQMPQIFDKLQDMDERRATR 217
>d1oisa_ e.15.1.1 (A:) Eukaryotic DNA topoisomerase I, N-terminal
DNA-binding fragment {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 223
Score = 29.7 bits (67), Expect = 0.85
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Query: 475 ERKKQKKLEKKEEKRKAMEEEEEEEEEVEVQEVEGEMMEEETEENDMHSSGGGRGEGE 532
+K+QKK +EK++ E E+ EE+ + E++G E+ + RG G
Sbjct: 103 LQKEQKKQLTSQEKKQIRLEREKFEEDYKFCELDGR--REQVGNFKVEPPDLFRGRGA 158
Score = 28.5 bits (64), Expect = 2.0
Identities = 5/31 (16%), Positives = 19/31 (61%)
Query: 482 LEKKEEKRKAMEEEEEEEEEVEVQEVEGEMM 512
+ ++E++K + +E+++ +E ++ E +
Sbjct: 101 FQLQKEQKKQLTSQEKKQIRLEREKFEEDYK 131
Score = 28.1 bits (63), Expect = 2.8
Identities = 8/28 (28%), Positives = 17/28 (60%)
Query: 405 QARKRERKKQKKLEKKEEKRKAMEEEEE 432
Q +K ++K+ EKK+ + + + EE+
Sbjct: 102 QLQKEQKKQLTSQEKKQIRLEREKFEED 129
Score = 26.2 bits (58), Expect = 8.8
Identities = 7/36 (19%), Positives = 16/36 (44%)
Query: 392 DMEKWREESKRAAQARKRERKKQKKLEKKEEKRKAM 427
M + + K + + KKQ +LE+++ +
Sbjct: 96 KMFDYFQLQKEQKKQLTSQEKKQIRLEREKFEEDYK 131
Score = 26.2 bits (58), Expect = 8.8
Identities = 7/36 (19%), Positives = 16/36 (44%)
Query: 457 DMEKWREESKRAAQARKRERKKQKKLEKKEEKRKAM 492
M + + K + + KKQ +LE+++ +
Sbjct: 96 KMFDYFQLQKEQKKQLTSQEKKQIRLEREKFEEDYK 131
>d1jfib_ a.22.1.3 (B:) Negative cofactor 2, NC2, beta chain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 135
Score = 28.7 bits (64), Expect = 0.88
Identities = 11/70 (15%), Positives = 25/70 (35%), Gaps = 1/70 (1%)
Query: 453 LEELDMEKWREESKRAAQARKRERKKQKKLEKKEEKRKAMEEEEEEEEEVEVQEVEGEMM 512
LE L + E K Q + +++ + + EEE ++ E+ +
Sbjct: 67 LESLGFGSYISEVKEVLQ-ECKTVALKRRKASSRLENLGIPEEELLRQQQELFAKARQQQ 125
Query: 513 EEETEENDMH 522
E ++ +
Sbjct: 126 AELAQQEWLQ 135
>d1v9da_ a.207.1.1 (A:) Diaphanous protein homolog 1, dia1 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 332
Score = 29.6 bits (66), Expect = 0.98
Identities = 21/147 (14%), Positives = 52/147 (35%), Gaps = 3/147 (2%)
Query: 354 NDKELLDKCQECSMVIRVAKNQQAERANKNANILLEELDMEKWREESKRAAQARKRERKK 413
+ E+L E + V + ++ + + D+E+ + A + + +K
Sbjct: 185 DHPEVLKFPDELAHVEKASRVSAENLQKSLDQMKKQIADVERDVQNFPAATDEKDKFVEK 244
Query: 414 QKK-LEKKEEKRKAMEEEEEVIRVAKNQQAE-RANKNANILLEELDMEKWREESKRAAQA 471
++ +E+ + + + + + +EE QA
Sbjct: 245 MTSFVKDAQEQYNKLRMMHSNMETLYKELGDYFVFDPKKLSVEEF-FMDLHNFRNMFLQA 303
Query: 472 RKRERKKQKKLEKKEEKRKAMEEEEEE 498
K +K+++ EK + A E+ E+E
Sbjct: 304 VKENQKRRETEEKMRRAKLAKEKAEKE 330
Score = 27.2 bits (60), Expect = 5.5
Identities = 8/28 (28%), Positives = 13/28 (46%)
Query: 396 WREESKRAAQARKRERKKQKKLEKKEEK 423
+E KR K R K K + ++E+
Sbjct: 304 VKENQKRRETEEKMRRAKLAKEKAEKER 331
>d1y2oa1 a.238.1.3 (A:1-248) BAP2/IRSp53 N-terminal domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 248
Score = 29.2 bits (65), Expect = 1.3
Identities = 12/66 (18%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
Query: 460 KWREESKRAAQARKRERKKQKKLEKKEEK----RKAMEEEEEEEEEVEVQEVEGEMMEEE 515
K++ E + A + + + KKL KK + +K ++E + + + ++ E E +
Sbjct: 122 KYQTEQRSKGDALDKCQAELKKLRKKSQGSKNPQKYSDKELQYIDAISNKQGELENYVSD 181
Query: 516 TEENDM 521
+ +
Sbjct: 182 GYKTAL 187
Score = 28.8 bits (64), Expect = 1.7
Identities = 35/160 (21%), Positives = 65/160 (40%), Gaps = 19/160 (11%)
Query: 324 KGHVKAVRWMVNHVAQF-PSDQEMTR-YIQTVNDKELLDKCQECSMVIRVAKNQQAERAN 381
K + KA+ + + + +M ++ KEL D + + V R +NQ E
Sbjct: 36 KNYEKALAGVTYAAKGYFDALVKMGELASESQGSKELGDVLFQMAEVHRQIQNQLEEMLK 95
Query: 382 KNANILLEELD-------------MEKWREESKRAAQARKRERKKQKKLEKKEEK----R 424
N LL +L+ ++K++ E + A + + + KKL KK + +
Sbjct: 96 SFHNELLTQLEQKVELDSRYLSAALKKYQTEQRSKGDALDKCQAELKKLRKKSQGSKNPQ 155
Query: 425 KAMEEEEEVIRVAKNQQAERANKNANILLEELDMEKWREE 464
K ++E + I N+Q E N ++ L E+ R
Sbjct: 156 KYSDKELQYIDAISNKQGELENYVSDGYKTALTEERRRFC 195
>d1ku2a2 a.177.1.1 (A:93-272) Sigma factor SigA {Thermus aquaticus
[TaxId: 271]}
Length = 180
Score = 28.2 bits (62), Expect = 2.0
Identities = 20/97 (20%), Positives = 41/97 (42%), Gaps = 4/97 (4%)
Query: 349 YIQTVNDKELLDKCQECSMVIRVAKNQQAERANKNANILLEELDMEKWREESKRAAQARK 408
Y+ + LL +E + +V + +A + A L +EL E R + A+ +K
Sbjct: 7 YLHEIGQVPLLTLEEEIDLARKVEEGMEAIKKLSEATGLDQELIREVVRAKILGTARIQK 66
Query: 409 RERKKQK----KLEKKEEKRKAMEEEEEVIRVAKNQQ 441
K+K +E+ + K K++ +E + +
Sbjct: 67 IPGLKEKPDPKTVEEVDGKLKSLPKELKRYLHIAREG 103
>d1k44a_ d.58.6.1 (A:) Nucleoside diphosphate kinase, NDK
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 135
Score = 27.7 bits (61), Expect = 2.0
Identities = 19/83 (22%), Positives = 31/83 (37%)
Query: 480 KKLEKKEEKRKAMEEEEEEEEEVEVQEVEGEMMEEETEENDMHSSGGGRGEGEEGDSGID 539
++E+K A++ E E E + +SG EG I
Sbjct: 23 SRIERKGLTIAALQLRTVSAELASQHYAEHEGKPFFGSLLEFITSGPVVAAIVEGTRAIA 82
Query: 540 ANSQASCSSNEVKTAAPNSRRKD 562
A Q + ++ V+ AAP + R D
Sbjct: 83 AVRQLAGGTDPVQAAAPGTIRGD 105
>d1rq0a_ e.38.1.1 (A:) Peptide chain release factor 1, RF1
{Thermotoga maritima [TaxId: 2336]}
Length = 333
Score = 28.5 bits (63), Expect = 2.0
Identities = 14/68 (20%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Query: 455 ELDMEKWREESKRAAQARKRERKKQKKLEKKEEKRKAMEEEEEEEEEVEVQEVEGEMMEE 514
+L E+ + A+ + E ++++ +E + + EE E E E+E E E + + +
Sbjct: 16 DLTPEQMKNYGMEYAKIEEIE-NITNRIKETQEFIELLREEGENELEIEKYEKELDQLYQ 74
Query: 515 ETEENDMH 522
E
Sbjct: 75 ELLFLLSP 82
>d2vzsa3 b.1.4.1 (A:675-777) Exochitosanase CsxA, domains 2, 4 and 5
{Amycolatopsis orientalis [TaxId: 31958]}
Length = 103
Score = 26.7 bits (59), Expect = 2.9
Identities = 9/50 (18%), Positives = 18/50 (36%), Gaps = 2/50 (4%)
Query: 229 GRVLLDKGADVNAPPVPSSRDTALTIAADKGHCR--FVELLLSKGAQVEV 276
G + ++ TA+T+ A G + +L+ + EV
Sbjct: 37 GTEKYSNTKTGLSVGALGAKATAVTVPAVSGLSTTYLAKNVLTDSSGKEV 86
>d2djia1 c.31.1.3 (A:187-363) Pyruvate oxidase {Aerococcus viridans
[TaxId: 1377]}
Length = 177
Score = 27.3 bits (59), Expect = 4.5
Identities = 12/106 (11%), Positives = 29/106 (27%), Gaps = 1/106 (0%)
Query: 317 CLMAAFRKGHVKAVRWMVNHVAQFPSDQEMTRYIQTVNDKELLDKCQECSMVIRVAKNQQ 376
+ + ++ + FP + + N ++
Sbjct: 73 RVGWKPANETILEADTVLFAGSNFPFSEVEGTFRNVDNFIQIDIDPAMLGKRHHADVAIL 132
Query: 377 AERANKNANILLEELDMEKWREESKRAAQARKRERKKQKKLEKKEE 422
+ A + +L ++D + + R+ LE KEE
Sbjct: 133 GD-AALAIDEILNKVDAVEESAWWTANLKNIANWREYINMLETKEE 177
Score = 26.9 bits (58), Expect = 5.6
Identities = 8/36 (22%), Positives = 14/36 (38%)
Query: 452 LLEELDMEKWREESKRAAQARKRERKKQKKLEKKEE 487
+L ++D + + R+ LE KEE
Sbjct: 142 ILNKVDAVEESAWWTANLKNIANWREYINMLETKEE 177
>d2iaza1 a.281.1.2 (A:1-111) Hypothetical protein SP1372
{Streptococcus pneumoniae [TaxId: 1313]}
Length = 111
Score = 26.2 bits (58), Expect = 4.5
Identities = 9/110 (8%), Positives = 34/110 (30%), Gaps = 24/110 (21%)
Query: 417 LEKKEEKRKAMEEEEEVIRVAKNQQAERANKNANILLEELDMEKWREESKRAAQARKRER 476
+ E + + E V + A A+ A+ + +
Sbjct: 5 YDSANELSRGLRGLPEYKAVKAAKDAIAADAEASKIFTDY-------------------L 45
Query: 477 KKQKKLEKKEEKRKAMEEEEEEE-----EEVEVQEVEGEMMEEETEENDM 521
Q++++K + + + + + ++++ + E ++ +
Sbjct: 46 AFQEEIQKLAQTGQMPDASFQAKMEGFGKQIQGNSLLSEFFTKQQQLAIY 95
>d1vpma_ d.38.1.1 (A:) Acyl-CoA hydrolase BH0798 {Bacillus
halodurans [TaxId: 86665]}
Length = 155
Score = 26.9 bits (59), Expect = 4.8
Identities = 11/31 (35%), Positives = 15/31 (48%), Gaps = 3/31 (9%)
Query: 387 LLEELDMEKWREESKRAAQARKRERKKQKKL 417
+ + + EK E A ARK RKK+ L
Sbjct: 128 VEPQTEEEKRLYE---TAPARKENRKKRAAL 155
Score = 26.9 bits (59), Expect = 4.8
Identities = 11/31 (35%), Positives = 15/31 (48%), Gaps = 3/31 (9%)
Query: 452 LLEELDMEKWREESKRAAQARKRERKKQKKL 482
+ + + EK E A ARK RKK+ L
Sbjct: 128 VEPQTEEEKRLYE---TAPARKENRKKRAAL 155
>d1iyjb2 a.171.1.1 (B:2761-2897) BRCA2 tower domain {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 137
Score = 26.4 bits (58), Expect = 5.4
Identities = 26/116 (22%), Positives = 49/116 (42%), Gaps = 12/116 (10%)
Query: 397 REESKRAAQARKRERKKQKKL----EKKEEKRKAMEEEEEVIRVAKNQQAERANKNANIL 452
REE K A + + ++KK + L + ++ + + V+ A +Q A ++ L
Sbjct: 15 REEEKEALRFAEAQQKKLEALFTKVHTELKEHEEDIAQRRVLSRALTRQQVHALQDGAEL 74
Query: 453 LEELD--------MEKWREESKRAAQARKRERKKQKKLEKKEEKRKAMEEEEEEEE 500
+ + EE RA ++ +K+ + E RKA+E E+EE
Sbjct: 75 YAAVQDASDPEHLETCFSEEQLRALNNYRQMLSDKKQARIQSEFRKALEAAEKEEG 130
>d2b3tb1 e.38.1.1 (B:7-354) Peptide chain release factor 1, RF1
{Escherichia coli [TaxId: 562]}
Length = 344
Score = 27.4 bits (60), Expect = 5.8
Identities = 12/66 (18%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Query: 457 DMEKWREESKRAAQARKRERKKQKKLEKKEEKRKAMEEEEEEEEEVEVQEVEGEMMEEET 516
D E++R S+ AQ + ++ +E + + ++ E E+ + E +E++
Sbjct: 21 DQERFRALSREYAQLSD-VSRCFTDWQQVQEDIETAQMMLDDPEMREMAQDELREAKEKS 79
Query: 517 EENDMH 522
E+ +
Sbjct: 80 EQLEQQ 85
>d1svma_ c.37.1.20 (A:) Papillomavirus large T antigen helicase
domain {Simian virus 40 [TaxId: 10633]}
Length = 362
Score = 26.9 bits (59), Expect = 6.4
Identities = 14/113 (12%), Positives = 38/113 (33%), Gaps = 5/113 (4%)
Query: 346 MTRYIQTVNDKELLDKCQECSMVIRVAKNQQAERANKNANILLEELDMEKWREESKRAAQ 405
+ Y++ + + C +C + + + E+ NA I + + + +++
Sbjct: 24 LGMYLE---FQYSFEMCLKCIKKEQPSHYKYHEKHYANAAIFADSKNQKTICQQAVDTVL 80
Query: 406 ARKRERKKQKKLEKKEEKRKAMEEEEEVIRVAKNQQAERANKNANILLEELDM 458
A+KR Q E+ R + + + + + + L
Sbjct: 81 AKKRVDSLQLTREQMLTNR--FNDLLDRMDIMFGSTGSADIEEWMAGVAWLHC 131
>d2g8oa1 d.117.1.1 (A:1-264) Thymidylate synthase {Escherichia coli
[TaxId: 562]}
Length = 264
Score = 26.9 bits (59), Expect = 6.8
Identities = 7/22 (31%), Positives = 14/22 (63%)
Query: 123 YVNIIKLLLTHGAEINSRTGSK 144
Y+ +++ +L G + N RTG+
Sbjct: 4 YLELMQKVLDEGTQKNDRTGTG 25
>d2ap3a1 a.24.27.1 (A:12-196) Hypothetical protein MW0975 (SA0943)
{Staphylococcus aureus [TaxId: 1280]}
Length = 185
Score = 26.6 bits (57), Expect = 7.0
Identities = 19/160 (11%), Positives = 61/160 (38%)
Query: 344 QEMTRYIQTVNDKELLDKCQECSMVIRVAKNQQAERANKNANILLEELDMEKWREESKRA 403
+ + K+ L + K + N + + E + + ++ +
Sbjct: 26 TVGKKIAELDEKKKKLTEDVNSKDTAVRGKAVKDLIKNADDRLKEFEKEEDAIKKSEQDF 85
Query: 404 AQARKRERKKQKKLEKKEEKRKAMEEEEEVIRVAKNQQAERANKNANILLEELDMEKWRE 463
+A+ +++KE K+ +E+ + +A + N+ L + +
Sbjct: 86 KKAKSHVDNIDNDVKRKEVKQLDDVLKEKYKLHSDYAKAYKKAVNSEKTLFKYLNQNDAT 145
Query: 464 ESKRAAQARKRERKKQKKLEKKEEKRKAMEEEEEEEEEVE 503
+ +++ E+ +K E ++ K + + ++E+++V+
Sbjct: 146 QQGVNEKSKAIEQNYKKLKEVSDKYTKVLNKVQKEKQDVD 185
>d2gy9i1 d.14.1.1 (I:4-129) Ribosomal protein S9 {Escherichia coli
[TaxId: 562]}
Length = 126
Score = 26.0 bits (57), Expect = 7.1
Identities = 21/103 (20%), Positives = 41/103 (39%), Gaps = 8/103 (7%)
Query: 331 RWMVNHVAQFPSDQEMTRYIQTVNDKELLDKCQECSMVIRVAKNQQAERANKNANILLEE 390
+ ++N + T + EL+D ++ + I V + +A + +
Sbjct: 23 KIVINQRSLEQYFGRETARMVVRQPLELVDMVEKLDLYITVKGGGISGQAGAIRHGITRA 82
Query: 391 LDM--EKWREESKRA----AQARKRERKK--QKKLEKKEEKRK 425
L E R E ++A AR+ ERKK +K ++ + K
Sbjct: 83 LMEYDESLRSELRKAGFVTRDARQVERKKVGLRKARRRPQFSK 125
>d1ez3a_ a.47.2.1 (A:) Syntaxin 1A N-terminal domain {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 124
Score = 26.0 bits (57), Expect = 7.1
Identities = 25/116 (21%), Positives = 46/116 (39%), Gaps = 5/116 (4%)
Query: 357 ELLDKCQECSMVIRVAKNQQAERANKNANILLEELDMEKWREESKRAAQARKRE----RK 412
E ++ +E I E K++ IL EK +EE + K+ R
Sbjct: 7 EFFEQVEEIRGFIDKIAENVEEVKRKHSAILASPNPDEKTKEELEELMSDIKKTANKVRS 66
Query: 413 KQKKLEKKEEKRKAMEEEEEVIRVAKNQQAERANKNANILLEELDME-KWREESKR 467
K K +E+ E+ + + +R+ K Q + + K ++ E + +RE K
Sbjct: 67 KLKSIEQSIEQEEGLNRSSADLRIRKTQHSTLSRKFVEVMSEYNATQSDYRERCKG 122
>d2glza1 d.81.3.1 (A:3-151) FwdE-like protein DSY1837 (Dhaf_2201)
{Desulfitobacterium hafniense [TaxId: 49338]}
Length = 149
Score = 26.3 bits (58), Expect = 7.2
Identities = 6/57 (10%), Positives = 14/57 (24%), Gaps = 5/57 (8%)
Query: 455 ELDMEKWREESKRAAQARKRERKKQKKLEKKEEKRKAMEEEEEEEEEVEVQEVEGEM 511
+ ++ K LE + EE ++ G++
Sbjct: 95 TVSPAVLDHLETLRHPDLSPRERQNKVLEGVQY-----VLTLEESAFCHYDKIPGQL 146
>d2j01t1 b.34.5.6 (T:1-138) Ribosomal protein L19 {Thermus
thermophilus [TaxId: 274]}
Length = 138
Score = 26.1 bits (57), Expect = 7.4
Identities = 9/37 (24%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Query: 462 REESKRAAQARKRERKKQKKLEKKEEKRKAMEEEEEE 498
R S R R++ R +K++++ +A +EE ++
Sbjct: 103 RNLSDREI--RRKLRADRKRIDQDRAAERAAKEEAQK 137
Score = 26.1 bits (57), Expect = 7.4
Identities = 6/35 (17%), Positives = 15/35 (42%)
Query: 472 RKRERKKQKKLEKKEEKRKAMEEEEEEEEEVEVQE 506
R ++ ++ + + KR + E + E Q+
Sbjct: 103 RNLSDREIRRKLRADRKRIDQDRAAERAAKEEAQK 137
>d1hvya_ d.117.1.1 (A:) Thymidylate synthase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 288
Score = 26.6 bits (58), Expect = 8.4
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 123 YVNIIKLLLTHGAEINSRTG 142
Y+ I+ +L G + RTG
Sbjct: 8 YLGQIQHILRCGVRKDDRTG 27
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.311 0.127 0.355
Gapped
Lambda K H
0.267 0.0606 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,060,528
Number of extensions: 96848
Number of successful extensions: 1204
Number of sequences better than 10.0: 1
Number of HSP's gapped: 707
Number of HSP's successfully gapped: 284
Length of query: 596
Length of database: 2,407,596
Length adjustment: 90
Effective length of query: 506
Effective length of database: 1,171,896
Effective search space: 592979376
Effective search space used: 592979376
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 56 (25.6 bits)