Query psy9046
Match_columns 215
No_of_seqs 290 out of 1336
Neff 9.3
Searched_HMMs 29240
Date Fri Aug 16 17:34:41 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9046.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9046hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2a62_A Cadherin-8; extracellul 100.0 3.2E-43 1.1E-47 290.1 17.2 191 2-215 90-298 (322)
2 3ubf_A Neural-cadherin; cell a 100.0 1.4E-40 4.9E-45 273.9 23.3 188 1-214 89-293 (316)
3 3mvs_A Cadherin-23, otocadheri 100.0 6.8E-39 2.3E-43 249.5 17.7 176 13-215 3-186 (210)
4 1l3w_A EP-cadherin, C-cadherin 100.0 4E-39 1.4E-43 282.7 17.2 190 1-215 97-310 (546)
5 3q2w_A Cadherin-2; cell adhesi 100.0 1.3E-38 4.4E-43 280.3 19.1 191 1-215 91-307 (559)
6 3q2v_A Cadherin-1; cell adhesi 100.0 2.2E-38 7.5E-43 278.3 19.9 190 1-215 91-304 (550)
7 3ubh_A Neural-cadherin; cell a 100.0 1.3E-37 4.6E-42 265.2 23.0 186 1-215 203-400 (419)
8 3ubh_A Neural-cadherin; cell a 100.0 5E-38 1.7E-42 267.8 20.3 188 2-215 95-299 (419)
9 1q55_A EP-cadherin, C-cadherin 100.0 7.8E-38 2.7E-42 286.8 17.2 190 1-215 246-459 (880)
10 3q2v_A Cadherin-1; cell adhesi 100.0 2.9E-36 1E-40 264.8 22.8 188 1-215 204-415 (550)
11 3q2w_A Cadherin-2; cell adhesi 100.0 1E-35 3.6E-40 261.8 22.6 188 1-215 206-420 (559)
12 1l3w_A EP-cadherin, C-cadherin 100.0 5.3E-36 1.8E-40 262.9 15.3 188 1-215 210-420 (546)
13 2x2u_A Proto-oncogene tyrosine 100.0 5.4E-37 1.9E-41 244.0 7.7 184 25-215 4-217 (246)
14 3ppe_A Vascular endothelial ca 100.0 1.7E-34 5.8E-39 223.5 20.6 166 29-215 5-184 (203)
15 2a4e_A Cadherin-11; dimer, cal 100.0 2.1E-34 7.2E-39 224.6 21.1 167 28-215 5-188 (215)
16 2qvi_A Cadherin-2; beta barrel 100.0 9.6E-35 3.3E-39 226.7 17.1 167 30-215 6-194 (215)
17 3k5r_A Cadherin 13; mouse, str 100.0 1.4E-34 4.8E-39 226.3 17.3 167 30-215 7-198 (218)
18 3qrb_A Cadherin-1; cell adhesi 100.0 5.6E-34 1.9E-38 222.2 18.6 168 29-215 5-195 (213)
19 1q55_A EP-cadherin, C-cadherin 100.0 6.9E-35 2.4E-39 267.3 15.1 188 1-215 359-569 (880)
20 3lnd_A CDH6 protein, cadherin 100.0 1.1E-33 3.9E-38 219.5 12.7 165 30-215 6-187 (207)
21 4apx_B Protocadherin-15, otoca 100.0 1.1E-30 3.8E-35 206.8 16.9 178 26-215 19-216 (242)
22 2a62_A Cadherin-8; extracellul 100.0 6.9E-31 2.4E-35 216.4 12.9 166 29-215 5-187 (322)
23 3ubf_A Neural-cadherin; cell a 100.0 1.9E-29 6.6E-34 207.5 16.7 166 28-215 8-185 (316)
24 2yst_A Protocadherin-7; BH-PCD 100.0 1.5E-28 5.1E-33 174.5 8.0 109 6-136 2-119 (119)
25 2a4e_A Cadherin-11; dimer, cal 99.9 1.1E-26 3.7E-31 181.0 13.5 116 1-137 90-215 (215)
26 2x2u_A Proto-oncogene tyrosine 99.9 1.8E-27 6.1E-32 189.1 8.3 117 1-139 112-245 (246)
27 2ee0_A Protocadherin-9; Ca dom 99.9 1.3E-26 4.5E-31 163.2 7.8 105 6-132 2-114 (114)
28 3mvs_A Cadherin-23, otocadheri 99.9 2.6E-25 9E-30 172.7 14.1 113 1-135 92-210 (210)
29 3ppe_A Vascular endothelial ca 99.9 1.9E-22 6.5E-27 155.7 13.7 108 1-130 87-203 (203)
30 2ee0_A Protocadherin-9; Ca dom 99.9 8.9E-24 3E-28 148.6 5.2 88 126-215 2-96 (114)
31 3qrb_A Cadherin-1; cell adhesi 99.9 1.2E-22 4.1E-27 158.0 11.5 109 1-130 91-213 (213)
32 3lnd_A CDH6 protein, cadherin 99.9 1.9E-22 6.3E-27 156.3 10.9 109 1-130 89-207 (207)
33 2qvi_A Cadherin-2; beta barrel 99.9 1.7E-22 5.7E-27 157.4 9.8 109 1-130 91-215 (215)
34 3k5r_A Cadherin 13; mouse, str 99.9 2.5E-22 8.5E-27 156.8 9.9 111 1-130 91-218 (218)
35 2yst_A Protocadherin-7; BH-PCD 99.9 7.2E-23 2.5E-27 145.1 5.9 88 126-215 2-95 (119)
36 2yqg_A Desmoglein-2, HDGC; cad 99.9 2.9E-22 1E-26 142.6 5.2 108 11-141 5-123 (123)
37 4apx_B Protocadherin-15, otoca 99.8 5.7E-21 1.9E-25 151.0 11.1 107 2-130 111-237 (242)
38 1wyj_A Protocadherin beta 14; 99.8 1.6E-21 5.6E-26 139.0 3.8 103 26-146 10-123 (125)
39 1ncg_A N-cadherin; cell adhesi 99.8 1.8E-19 6E-24 125.7 8.0 93 27-138 5-110 (110)
40 3k6d_A T-cadherin; cell adhesi 99.7 1.7E-16 5.8E-21 108.4 8.8 85 29-130 5-99 (99)
41 3k6f_A T-cadherin; cell adhesi 99.7 5.5E-16 1.9E-20 106.0 9.9 84 30-130 7-100 (100)
42 3k6i_A T-cadherin; cell adhesi 99.7 9.3E-16 3.2E-20 104.7 10.1 84 30-130 6-99 (99)
43 1zvn_A Mn-cadherin; strand dim 99.6 1.7E-15 5.9E-20 103.3 8.2 86 28-130 5-99 (99)
44 1zxk_A Cadherin-8; strand dime 99.6 2.4E-15 8.3E-20 102.4 8.3 85 29-130 5-98 (98)
45 1zvn_A Mn-cadherin; strand dim 99.6 3.7E-15 1.3E-19 101.6 8.4 72 143-215 6-80 (99)
46 2omz_B Epithelial-cadherin; le 99.6 3.4E-15 1.2E-19 103.0 7.1 86 30-131 10-105 (105)
47 2yqg_A Desmoglein-2, HDGC; cad 99.6 2E-15 6.7E-20 107.2 5.2 82 131-215 5-94 (123)
48 1zxk_A Cadherin-8; strand dime 99.6 1.3E-14 4.6E-19 98.7 8.0 70 143-215 5-79 (98)
49 3k6d_A T-cadherin; cell adhesi 99.5 2.3E-14 7.7E-19 97.8 7.0 69 143-215 5-81 (99)
50 1wuz_A Pcdha4 protein, CNR-EC1 99.5 7.7E-15 2.6E-19 100.8 3.1 90 27-134 3-103 (103)
51 3k6i_A T-cadherin; cell adhesi 99.5 1E-13 3.5E-18 94.5 8.4 70 144-215 6-81 (99)
52 3k6f_A T-cadherin; cell adhesi 99.5 1.3E-13 4.5E-18 94.2 8.3 70 144-215 7-82 (100)
53 2omz_B Epithelial-cadherin; le 99.4 1.7E-13 5.8E-18 94.4 7.1 71 144-215 10-86 (105)
54 1ncg_A N-cadherin; cell adhesi 99.4 3.9E-13 1.3E-17 93.4 7.0 71 142-215 6-84 (110)
55 1wyj_A Protocadherin beta 14; 99.2 1.1E-12 3.8E-17 93.1 0.6 71 141-214 11-91 (125)
56 1wuz_A Pcdha4 protein, CNR-EC1 99.0 1E-11 3.5E-16 85.1 -1.5 70 141-213 3-84 (103)
57 1op4_A Neural-cadherin; beta s 96.0 0.025 8.7E-07 40.9 7.0 78 133-215 31-108 (159)
58 2yhg_A SDE_182CT, cellulose-bi 91.9 1.1 3.6E-05 37.8 9.3 64 49-128 365-436 (437)
59 3pdd_A Glycoside hydrolase, fa 89.9 4.6 0.00016 29.8 18.6 99 101-215 58-163 (190)
60 2yrl_A KIAA1837 protein; PKD d 87.7 1.6 5.4E-05 28.8 5.9 31 103-133 68-98 (102)
61 1op4_A Neural-cadherin; beta s 86.9 4.3 0.00015 29.2 8.1 59 14-80 32-91 (159)
62 2yhg_A SDE_182CT, cellulose-bi 79.2 6.3 0.00022 33.1 7.3 80 129-215 328-420 (437)
63 2y72_A Collagenase, collagenas 78.2 4.8 0.00016 25.3 5.1 28 102-129 57-84 (85)
64 3pdd_A Glycoside hydrolase, fa 77.6 18 0.00063 26.4 13.6 70 41-130 110-180 (190)
65 2kpn_A Bacillolysin; solution 75.9 9 0.00031 25.3 6.0 29 108-136 63-91 (103)
66 3rb5_A Na/Ca exchange protein; 75.9 28 0.00095 27.6 14.1 54 123-181 111-165 (298)
67 3pe9_A Fibronectin(III)-like m 63.8 27 0.00093 22.7 10.1 28 103-130 60-88 (98)
68 3rb5_A Na/Ca exchange protein; 46.2 77 0.0026 25.0 7.4 28 26-53 90-121 (298)
69 3knb_B Obscurin-like protein 1 40.4 69 0.0024 20.3 8.1 21 109-130 85-105 (107)
70 3knb_A Titin; IG-like, titin, 36.1 78 0.0027 19.7 9.2 20 110-130 80-99 (100)
71 1b4r_A Protein (PKD1_human); P 35.1 79 0.0027 19.6 4.7 27 102-129 53-79 (80)
72 2c4x_A Endoglucanase, ctcel9D- 32.6 72 0.0025 24.7 5.1 31 102-132 67-97 (260)
73 2kzw_A Uncharacterized protein 27.0 1.1E+02 0.0037 21.3 4.8 30 101-131 111-140 (145)
74 4a2l_A BT_4663, two-component 26.5 68 0.0023 28.6 4.6 37 100-141 750-788 (795)
75 2xwx_A GBPA, glcnac-binding pr 25.2 2.9E+02 0.0098 22.7 13.7 20 99-118 359-378 (391)
76 3ead_A Na/Ca exchange protein; 22.3 1.9E+02 0.0064 19.6 10.3 29 120-151 105-133 (137)
77 2e7m_A Protein KIAA0319; PKD d 22.1 55 0.0019 21.9 2.3 28 102-130 78-105 (113)
78 3ott_A Two-component system se 21.5 71 0.0024 28.3 3.7 36 99-139 715-752 (758)
No 1
>2a62_A Cadherin-8; extracellular domain, homodimer, calcium binding, adhesion; 4.50A {Mus musculus}
Probab=100.00 E-value=3.2e-43 Score=290.05 Aligned_cols=191 Identities=26% Similarity=0.442 Sum_probs=171.7
Q ss_pred eEEEEEEEecCCCCCccCCCCCCCCCceEEEEecCCCCCcEEEEEEEEeCCC---Cc---eeEEEecCCCcEEEeCCccc
Q psy9046 2 GTLIISIIDVNDIPPEFEPPWTRDEPNYLLEIEEEQPIGSLLGKFTALDKDS---SI---ALYVLEQDGDMFSVNNITVC 75 (215)
Q Consensus 2 ~~v~I~V~DvND~~P~f~~~~~~~~~~~~~~V~E~~~~g~~v~~v~a~D~D~---~~---~~y~i~~~~~~F~id~~tg~ 75 (215)
++|+|.|.|+|||+|.| ....|.++|+|++++|+.|+++.|+|+|. |. ..|+|.+++.+|.|++.+|.
T Consensus 90 ~~v~I~V~DvNDn~P~F------~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~~G~n~~i~Y~i~~~~~~F~Id~~tG~ 163 (322)
T 2a62_A 90 SEFIIKVQDINDNAPEF------LNGPYHATVPEMSILGTSVTNVTATDADDPVYGNSAKLVYSILEGQPYFSIEPETAI 163 (322)
T ss_dssp EEECEECCCCSCSCBCC------SSSEEEEEECSSCCTTCBCCCCCCCBCSCSSSTTSSCEEEEEEECTTTEEECTTTCC
T ss_pred EEEEEEEEecCCCCCcc------CCCceEEEEeCCCCCCCEEEEEEEEeCCCCCCCccEEEEEEEccCCCCEEEecCCCE
Confidence 57899999999999999 58899999999999999999999999995 43 47999988999999999998
Q ss_pred eEEEEEEEecCCCcceeeEEEEecCCCCCeEEEEEEEEeCCCC----ceEEEEEEEEeeCCCCCCccCCCceEEEEecCC
Q psy9046 76 EFQLSVDLAAADNFQSEYNATIKENSPGDTKVVLVSAEDASTP----CSHFRVNIKVLDVNDNRPEFKSKTYRTSIQENI 151 (215)
Q Consensus 76 ~~~~~~~~~ld~e~~~~~~~~~~e~~~~~~~~l~v~a~D~~~~----~~~~~v~I~V~DvNdn~P~f~~~~~~~~v~E~~ 151 (215)
+.+... .||||....|. |.|.|+|++.| +++++|+|+|.|+|||+|.|.+..|.+.|.|++
T Consensus 164 i~~~~~--~LD~E~~~~y~-------------l~V~a~D~g~p~~~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~ 228 (322)
T 2a62_A 164 IKTALP--NMDREAKEEYL-------------VVIQAKDMGGHSGGLSGTTTLTVTLTDVNDNPPKFAQSLYHFSVPEDV 228 (322)
T ss_dssp EEECSS--CCCGGGCSEEE-------------EEEEEEESCSSSSCCBCCEEEEEEECCCCCCCCCCSCSEEEEEECSCC
T ss_pred EEeccc--CCCcccCCeEE-------------EEEEEEECCCCCCCceeEEEEEEEEEecCCCCCeecCCCceeEeECCC
Confidence 655412 79999999998 79999998864 688999999999999999999999999999999
Q ss_pred CCCCCCEEEEEEEEeCCC--CCeEEEEEeeCCCCCcEEEc----C-CeeEEEcccCCCC-ccEEEEEEEEEC
Q psy9046 152 IITPSPTLLTLEATDSDE--NPHLTYKILSGNDDDVFAVD----D-TGILTIQGPLAKG-KTVYNLLVQVSD 215 (215)
Q Consensus 152 ~~g~~~~i~~v~a~D~D~--~~~i~y~i~~~~~~~~F~Id----~-~G~i~~~~~ld~~-~~~y~l~V~a~D 215 (215)
++| +.|+++.|+|+|. |+.++|+|..++..+.|.|+ + +|.|++.++||+| ...|.|+|+|+|
T Consensus 229 ~~g--t~v~~v~A~D~D~g~n~~i~Y~i~~g~~~~~F~I~~d~~~~tG~i~~~~~LD~E~~~~y~l~V~A~D 298 (322)
T 2a62_A 229 VLG--TAIGRVKANDQDIGENAQSSYDIIDGDGTALFEITSDAQAQDGVIRLRKPLDFETKKSYTLKVEAAN 298 (322)
T ss_dssp SSC--CEEEEEECCCSSCGGGTCCEEEEC---CCSSBCCBCCTTTSEEEEEBCSCCCCSSCCEEEEEEEEEC
T ss_pred CCC--cEEEEEEEEeCCCCCCceEEEEEECCCCCCcEEEeccCCCceEEEEECCcCCcccCCeEEEEEEEEE
Confidence 988 9999999999998 88999999988878899998 4 8999999999965 789999999998
No 2
>3ubf_A Neural-cadherin; cell adhesion; 2.50A {Drosophila melanogaster} PDB: 3ubg_A
Probab=100.00 E-value=1.4e-40 Score=273.91 Aligned_cols=188 Identities=22% Similarity=0.342 Sum_probs=168.8
Q ss_pred CeEEEEEEEecCCCCCccCCCCCCCCCc--eEEEEecCCCCCcEEEEEEEEeCCCCce-eEEEec--CCCcEEEeCCccc
Q psy9046 1 MGTLIISIIDVNDIPPEFEPPWTRDEPN--YLLEIEEEQPIGSLLGKFTALDKDSSIA-LYVLEQ--DGDMFSVNNITVC 75 (215)
Q Consensus 1 t~~v~I~V~DvND~~P~f~~~~~~~~~~--~~~~V~E~~~~g~~v~~v~a~D~D~~~~-~y~i~~--~~~~F~id~~tg~ 75 (215)
+++|+|.|.|+|||+|.|. ... |.+.|+|++++|+.|+++.|+|+|.|.+ .|+|.. ..++|.|++.+|.
T Consensus 89 ~~~v~I~V~DvNDn~P~F~------~~~~~y~~~v~En~~~gt~v~~v~A~D~D~g~ni~Y~i~~~~~~~~F~Id~~tG~ 162 (316)
T 3ubf_A 89 NQRVIILVKDVNDEPPYFI------NRPLPMQAVVQLNAPPNTPVFTLQARDPDTDHNIHYFIVRDRTGGRFEVDERSGV 162 (316)
T ss_dssp EEEEEEEEECTTCCCCEEC------CSSSSEEEEECTTCCTTCEEEECCEECSSTTCCEEEEEEEEESSSCEEECTTTCE
T ss_pred eEEEEEEEEECCCCCCccC------CCCCCEEEEEeCCCCCCCEEEEEEEECCCCCCceEEEEEeCCCCCEEEEECCccE
Confidence 4789999999999999993 554 8999999999999999999999999864 799964 4689999999998
Q ss_pred eEEEEEEEecCCCcceeeEEEEecCCCCCeEEEEEEEEeCCCC------ceEEEEEEEEeeCCCCCCccCCCceEEEEec
Q psy9046 76 EFQLSVDLAAADNFQSEYNATIKENSPGDTKVVLVSAEDASTP------CSHFRVNIKVLDVNDNRPEFKSKTYRTSIQE 149 (215)
Q Consensus 76 ~~~~~~~~~ld~e~~~~~~~~~~e~~~~~~~~l~v~a~D~~~~------~~~~~v~I~V~DvNdn~P~f~~~~~~~~v~E 149 (215)
+.+.+ +||||....|. |.|+|+|++++ ++++.++|.|.| |||+|+|.+..|.+.|.|
T Consensus 163 i~~~~---~lD~e~~~~y~-------------l~V~A~D~g~~~~~~~~~~~~~v~I~V~d-nDn~P~F~~~~y~~~v~E 225 (316)
T 3ubf_A 163 VRTRG---TDLFQLDMEYV-------------LYVKAEDQNGKVDDRRFQSTPEERLSIVG-GKRAPQFYMPSYEAEIPE 225 (316)
T ss_dssp EEECS---SCCCCTTCEEE-------------EEEEEEESCC-------CBCCCEEEEEEE-SCCCCEESSSSEEEEEET
T ss_pred EEECC---cCCcccCcEEE-------------EEEEEEeCCCCCCCccccceEEEEEEEEc-CCCCCEEcCCCceEEEeC
Confidence 65444 79999999888 79999998742 677889999999 999999999999999999
Q ss_pred CCCCCCCCEEEEEEEEeCCCCCeEEEEEe-eCCCCCcEEEcC-CeeEEEcccCCCCc----cEEEEEEEEE
Q psy9046 150 NIIITPSPTLLTLEATDSDENPHLTYKIL-SGNDDDVFAVDD-TGILTIQGPLAKGK----TVYNLLVQVS 214 (215)
Q Consensus 150 ~~~~g~~~~i~~v~a~D~D~~~~i~y~i~-~~~~~~~F~Id~-~G~i~~~~~ld~~~----~~y~l~V~a~ 214 (215)
++++| +.|+++.|+|+| ++.++|+|. .++..++|.|++ +|.|++.++||+|. ..|.|+|+|+
T Consensus 226 n~~~g--t~v~~v~A~D~D-n~~i~Y~i~~~~~~~~~F~Id~~tG~i~~~~~LD~E~~~~~~~y~l~V~A~ 293 (316)
T 3ubf_A 226 NQKKD--SDIISIKAKSFA-DREIRYTLKAQGQGAGTFNIGPTSGIVKLAKELDFEDLRQPHVYSLIVTAT 293 (316)
T ss_dssp TCCTT--CEEEECCEECTT-CCCEEEEEEEESSCTTTEEECTTTCEEEECSCCCSSCTTSCSEEEEEEEEE
T ss_pred CCCCC--CEEEEEEEEeCC-CCEEEEEEEcCCCCCCeEEEECCeEEEEECCcCCccccCCCceEEEEEEEE
Confidence 99988 999999999999 999999998 567789999999 99999999999764 6899999998
No 3
>3mvs_A Cadherin-23, otocadherin; adhesion, extracellular domain, cell adhesion; 1.10A {Mus musculus} PDB: 4apx_A* 2whv_A 2wcp_A* 4aq8_A 4axw_A* 4aqe_A* 4aqa_A* 2wd0_A* 2wbx_A
Probab=100.00 E-value=6.8e-39 Score=249.49 Aligned_cols=176 Identities=28% Similarity=0.412 Sum_probs=159.1
Q ss_pred CCCCccCCCCCCCCCceE--EEEecCCCCCcEEEEEEEEeCCCCceeEEEecC--CCcEEEeCCccceEEEEEEEecCCC
Q psy9046 13 DIPPEFEPPWTRDEPNYL--LEIEEEQPIGSLLGKFTALDKDSSIALYVLEQD--GDMFSVNNITVCEFQLSVDLAAADN 88 (215)
Q Consensus 13 D~~P~f~~~~~~~~~~~~--~~V~E~~~~g~~v~~v~a~D~D~~~~~y~i~~~--~~~F~id~~tg~~~~~~~~~~ld~e 88 (215)
|++|.| .+..|. ++|+|++++|+.|+++.|+|+|.+...|+|..+ .++|.|++.+|.+.+.+ +||||
T Consensus 3 n~~P~F------~~~~y~~~~~V~E~~~~Gt~v~~v~A~D~D~~~~~y~i~~~~~~~~F~Id~~tG~i~~~~---~LD~E 73 (210)
T 3mvs_A 3 NRLPFF------TNHFFDTYLLISEDTPVGSSVTQLLARDMDNDPLVFGVSGEEASRFFAVEPDTGVVWLRQ---PLDRE 73 (210)
T ss_dssp CCCCEE------CCGGGTSCEEEETTCCTTCEEEECCEECTTCCCCEEEEESHHHHHHEEECTTTCEEEESS---CCCTT
T ss_pred CCCCcc------CCCccceEEEEeCCCCCCCEEEEEEEEeCCCCcEEEEEeCCCCCCcEEEeCCCCEEEECC---ccCCc
Confidence 489999 577786 799999999999999999999998889999654 47899999999865544 79999
Q ss_pred cceeeEEEEecCCCCCeEEEEEEEEeCCCCceEEEEEEEEeeCCCCCCccCCCceEEEEecCCCCCCCCEEEEEEEEeCC
Q psy9046 89 FQSEYNATIKENSPGDTKVVLVSAEDASTPCSHFRVNIKVLDVNDNRPEFKSKTYRTSIQENIIITPSPTLLTLEATDSD 168 (215)
Q Consensus 89 ~~~~~~~~~~e~~~~~~~~l~v~a~D~~~~~~~~~v~I~V~DvNdn~P~f~~~~~~~~v~E~~~~g~~~~i~~v~a~D~D 168 (215)
....|. |.|.|+|++. ..++++.|+|.|+|||+|.|.+..|.+.|.|++++| +.|+++.|+|+|
T Consensus 74 ~~~~y~-------------l~v~a~D~~~-~~~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~~g--t~v~~v~A~D~D 137 (210)
T 3mvs_A 74 TKSEFT-------------VEFSVSDHQG-VITRKVNIQVGDVNDNAPTFHNQPYSVRIPENTPVG--TPIFIVNATDPD 137 (210)
T ss_dssp TCCEEE-------------EEEEEECSSC-EEEEEEEEEEECCCCCCCEECSCSEEEEEETTCCTT--CEEEECCEECCS
T ss_pred ccceEE-------------EEEEEEeCCC-CEEEEEEEEEEeCCCCCCcCCCceEEEEEECCCCCC--CEEEEEEEEeCC
Confidence 999998 7899999877 578899999999999999999999999999999988 999999999999
Q ss_pred C--CCeEEEEEeeCCCCCcEEEcC-CeeEEEcccCCCC-ccEEEEEEEEEC
Q psy9046 169 E--NPHLTYKILSGNDDDVFAVDD-TGILTIQGPLAKG-KTVYNLLVQVSD 215 (215)
Q Consensus 169 ~--~~~i~y~i~~~~~~~~F~Id~-~G~i~~~~~ld~~-~~~y~l~V~a~D 215 (215)
. |+.++|+|.++ .+.|.|++ +|.|++.++||+| ...|.|+|+|+|
T Consensus 138 ~g~n~~v~Y~i~~~--~~~F~Id~~tG~i~~~~~LD~E~~~~y~l~V~a~D 186 (210)
T 3mvs_A 138 LGAGGSVLYSFQPP--SPFFAIDSARGIVTVIQELDYEVTQAYQLTVNATD 186 (210)
T ss_dssp SGGGGCEEEEESSC--CSSEEECTTTCEEEECSCCCTTTCSEEEEEEEEEE
T ss_pred CCCCceEEEEEeCC--CCCEEEeCCcEEEEECCcCCCcccceEEEEEEEEE
Confidence 8 88999999754 46899999 9999999999965 789999999997
No 4
>1l3w_A EP-cadherin, C-cadherin; cell adhesion, calcium binding, extracellular, ECT metal binding protein; HET: NAG NDG; 3.08A {Xenopus laevis} SCOP: b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1
Probab=100.00 E-value=4e-39 Score=282.70 Aligned_cols=190 Identities=27% Similarity=0.363 Sum_probs=170.1
Q ss_pred CeEEEEEEEecCCCCCccCCCCCCCCCceEEEEecCCCCCcEEEEEEEEeCCCC------ceeEEEecCC------CcEE
Q psy9046 1 MGTLIISIIDVNDIPPEFEPPWTRDEPNYLLEIEEEQPIGSLLGKFTALDKDSS------IALYVLEQDG------DMFS 68 (215)
Q Consensus 1 t~~v~I~V~DvND~~P~f~~~~~~~~~~~~~~V~E~~~~g~~v~~v~a~D~D~~------~~~y~i~~~~------~~F~ 68 (215)
+++|+|.|.|+|||+|.| .+..|.++|+|++++|+.|+++.|+|+|.| ..+|+|.++. ++|.
T Consensus 97 ~~~v~I~V~DvNDn~P~F------~~~~y~~~V~En~~~gt~v~~v~A~D~D~g~~~~n~~v~Ysi~~~~~~~~~~~~F~ 170 (546)
T 1l3w_A 97 PMEITINVIDQNDNRPKF------TQDVFRGSVREGVQPGTQVMAVSATDEDDNIDSLNGVLSYSILKQDPEEPIPNLFT 170 (546)
T ss_dssp CEEEEEEEECCSCCCCEE------SSSCEEEEEETTCCSSEEEEECCEECCSCCSSSSTTCCEEEEEEESSCCSCSCSEE
T ss_pred eEEEEEEEEecccCcCEe------cCceeEEEEECCCCCCCEEEEEEEEcCCCCCCCCCCEEEEEEeCCCCCcccCCcEE
Confidence 478999999999999999 588999999999999999999999999987 2479996543 7999
Q ss_pred EeCCccceEEEEEEEecCCCcceeeEEEEecCCCCCeEEEEEEEEeCCCC--ceEEEEEEEEeeCCCCCCccCCCceEEE
Q psy9046 69 VNNITVCEFQLSVDLAAADNFQSEYNATIKENSPGDTKVVLVSAEDASTP--CSHFRVNIKVLDVNDNRPEFKSKTYRTS 146 (215)
Q Consensus 69 id~~tg~~~~~~~~~~ld~e~~~~~~~~~~e~~~~~~~~l~v~a~D~~~~--~~~~~v~I~V~DvNdn~P~f~~~~~~~~ 146 (215)
|++.+|.+.++.. .||||....|. |+|+|+|++.+ +++++|.|+|.|+|||+|+|.+..|.+.
T Consensus 171 Id~~tG~i~~~~~--~LD~E~~~~y~-------------l~V~A~D~g~~~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~ 235 (546)
T 1l3w_A 171 INRETGVISLIGT--GLDREKFPEYT-------------LTVQATDLEGAGLSVEGKAIIQITDANDNAPIFDPKTYTAL 235 (546)
T ss_dssp ECTTTCEEEECSC--CCCTTTCCEEE-------------EEEEEEHHHHTSCEEECCEEEEEECCCCCCCCBSCSEEEEE
T ss_pred EeCCCceEEEecc--CCCcccCceEE-------------EEEEEEECCCCCcceEEEEEEEEeecCCCCCccccccceEE
Confidence 9999998765422 79999999998 79999998754 7899999999999999999999999999
Q ss_pred EecCCCCCCCCEEEEEEEEeCC--C--CCeEEEEEeeCCCCCcEEEc----C-CeeEEEcccCCCC-ccEEEEEEEEEC
Q psy9046 147 IQENIIITPSPTLLTLEATDSD--E--NPHLTYKILSGNDDDVFAVD----D-TGILTIQGPLAKG-KTVYNLLVQVSD 215 (215)
Q Consensus 147 v~E~~~~g~~~~i~~v~a~D~D--~--~~~i~y~i~~~~~~~~F~Id----~-~G~i~~~~~ld~~-~~~y~l~V~a~D 215 (215)
|.|+ ++| +.|+++.|+|+| . |+.++|+|.+ +..+.|.|+ . +|.|++.++||+| ...|.|+|+|+|
T Consensus 236 V~En-~~g--t~v~~v~A~D~D~~~g~n~~v~y~i~~-~~~~~F~I~~d~~~~~G~i~~~~~LD~E~~~~y~l~V~a~D 310 (546)
T 1l3w_A 236 VPEN-EIG--FEVQRLSVTDLDMPGTPAWQAVYKIRV-NEGGFFNITTDPESNQGILTTAKGLDFELRKQYVLQITVEN 310 (546)
T ss_dssp EESS-SCC--CEEEEECBCCCSCTTSTTSCEECCBSC-CTTSCEEEEECTTTCCEEEEESSCCCCSSCCCEEEEECCEE
T ss_pred EEeC-CCC--CEEEEEEEEeCCCCCCCCcEEEEEEEe-CCCceEEEEecCCCCeEEEEECccCCcccccEEEEEEEEEE
Confidence 9999 877 999999999999 4 7899999987 677899995 3 7999999999965 789999999987
No 5
>3q2w_A Cadherin-2; cell adhesion, calcium binding; HET: MAN NAG; 3.20A {Mus musculus}
Probab=100.00 E-value=1.3e-38 Score=280.26 Aligned_cols=191 Identities=26% Similarity=0.413 Sum_probs=170.4
Q ss_pred CeEEEEEEEecCCCCCccCCCCCCCCCceEEEEecCCCCCcEEEEEEEEeCCCC--c---eeEEEecCC------CcEEE
Q psy9046 1 MGTLIISIIDVNDIPPEFEPPWTRDEPNYLLEIEEEQPIGSLLGKFTALDKDSS--I---ALYVLEQDG------DMFSV 69 (215)
Q Consensus 1 t~~v~I~V~DvND~~P~f~~~~~~~~~~~~~~V~E~~~~g~~v~~v~a~D~D~~--~---~~y~i~~~~------~~F~i 69 (215)
+++|+|.|.|+|||+|.| .+..|.++|+|++++|+.|+++.|+|+|.| . ..|+|.++. ++|.|
T Consensus 91 ~~~v~I~V~DvNDn~P~F------~~~~y~~~V~En~~~Gt~v~~v~A~D~D~g~~~n~~v~Ysi~~~~~~~~~~~~F~I 164 (559)
T 3q2w_A 91 PIDIVINVIDMNDNRPEF------LHQVWNGSVPEGSKPGTYVMTVTAIDADDPNALNGMLRYRILSQAPSTPSPNMFTI 164 (559)
T ss_dssp EEEEEEEEECCCCCCCEE------SCSEEEEEEETTCCTTCEEEECCEECSSCTTSGGGCCEEEEEEEESCCSCTTCEEE
T ss_pred eEEEEEEEEeCCCCCCcc------CCCeeEEEEeCCCCCCcEEEEEEEEcCCCCCCCceEEEEEEecCCCCCCCcceEEE
Confidence 368999999999999999 589999999999999999999999999986 2 369996432 68999
Q ss_pred eCCccceEEEEEEEecCCCcceeeEEEEecCCCCCeEEEEEEEEeCCC-----CceEEEEEEEEeeCCCCCCccCCCceE
Q psy9046 70 NNITVCEFQLSVDLAAADNFQSEYNATIKENSPGDTKVVLVSAEDAST-----PCSHFRVNIKVLDVNDNRPEFKSKTYR 144 (215)
Q Consensus 70 d~~tg~~~~~~~~~~ld~e~~~~~~~~~~e~~~~~~~~l~v~a~D~~~-----~~~~~~v~I~V~DvNdn~P~f~~~~~~ 144 (215)
++.+|.+.+... .||||....|. |.|+|+|+++ .+++++|.|+|.|+|||+|+|.+..|.
T Consensus 165 d~~tG~i~~~~~--~LD~E~~~~y~-------------l~V~A~D~~g~p~~~~s~t~~v~I~V~DvNDn~P~f~~~~y~ 229 (559)
T 3q2w_A 165 NNETGDIITVAA--GLDREKVQQYT-------------LIIQATDMEGNPTYGLSNTATAVITVTDVNDNPPEFTAMTFY 229 (559)
T ss_dssp CTTTCEEEECCS--CCCTTTCCEEE-------------EEEEEEHHHHCTTTCCEEEEEEEEEEECCSCSCCEESSSEEE
T ss_pred eCCceEEEEEec--cCCcccCCEEE-------------EEEEEEECCCCCCCCccceEEEEEEEEeCCCCCCccccccce
Confidence 999998665543 69999999998 7999999743 378999999999999999999999999
Q ss_pred EEEecCCCCCCCCEEEEEEEEeCCC----CCeEEEEEeeCCCCCcEEE----cC-CeeEEEcccCCCC-ccEEEEEEEEE
Q psy9046 145 TSIQENIIITPSPTLLTLEATDSDE----NPHLTYKILSGNDDDVFAV----DD-TGILTIQGPLAKG-KTVYNLLVQVS 214 (215)
Q Consensus 145 ~~v~E~~~~g~~~~i~~v~a~D~D~----~~~i~y~i~~~~~~~~F~I----d~-~G~i~~~~~ld~~-~~~y~l~V~a~ 214 (215)
+.|.|+. +| +.+++++|+|+|. |+.+.|+|.+++..+.|.| ++ +|.|++.++||+| ...|.|+|+|+
T Consensus 230 ~~V~En~-~g--~~v~~v~a~D~D~~~~~n~~~~y~i~~g~~~~~F~I~~~~~~~~G~i~~~~~LD~E~~~~y~l~V~A~ 306 (559)
T 3q2w_A 230 GEVPENR-VD--VIVANLTVTDKDQPHTPAWNAAYRISGGDPTGRFAILTDPNSNDGLVTVVKPIDFETNRMFVLTVAAE 306 (559)
T ss_dssp EEEESSC-SS--EEEEEEEEECCSCTTSTTTSBCCEEEESCTTCCEEEEECTTTCEEEEEECSCCCTTTCSEEEEEEECC
T ss_pred eEecCCC-CC--cEEEEEEEEcCCCCCCCceeEEEEEecCCCCCceEEEecCCCCcEEEEeCCCCCCccCceEEEEEEEE
Confidence 9999997 56 9999999999998 4579999999888899999 56 9999999999965 78999999998
Q ss_pred C
Q psy9046 215 D 215 (215)
Q Consensus 215 D 215 (215)
|
T Consensus 307 D 307 (559)
T 3q2w_A 307 N 307 (559)
T ss_dssp B
T ss_pred c
Confidence 6
No 6
>3q2v_A Cadherin-1; cell adhesion, calcium binding; HET: MAN; 3.40A {Mus musculus}
Probab=100.00 E-value=2.2e-38 Score=278.32 Aligned_cols=190 Identities=29% Similarity=0.416 Sum_probs=169.3
Q ss_pred CeEEEEEEEecCCCCCccCCCCCCCCCceEEEEecCCCCCcEEEEEEEEeCCCC---c---eeEEEec------CCCcEE
Q psy9046 1 MGTLIISIIDVNDIPPEFEPPWTRDEPNYLLEIEEEQPIGSLLGKFTALDKDSS---I---ALYVLEQ------DGDMFS 68 (215)
Q Consensus 1 t~~v~I~V~DvND~~P~f~~~~~~~~~~~~~~V~E~~~~g~~v~~v~a~D~D~~---~---~~y~i~~------~~~~F~ 68 (215)
+++|+|.|.|+|||+|.| .+..|.++|+|++++|+.|+++.|+|+|.| . ..|+|.+ ..++|.
T Consensus 91 ~~~v~I~V~DvNDn~P~F------~~~~y~~~V~E~~~~Gt~v~~v~A~D~D~g~~~~N~~i~Ysi~~~~~~~~~~~~F~ 164 (550)
T 3q2v_A 91 PMEIVITVTDQNDNRPEF------TQEVFEGSVAEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQDPELPHKNMFT 164 (550)
T ss_dssp CEEEEEEEECCSCCCCCB------SCSEEEEEEETTCCTTCEEEECCBCCCSCTTTCGGGCCEEEEEEEESCCSSSCSEE
T ss_pred eEEEEEEEEecCCCCCcc------CCCceEEEEeCCCCCCCEEEEEEEEeCCCCCCCcceEEEEEEecCCCCCCcCCceE
Confidence 468999999999999999 589999999999999999999999999988 3 3699964 246999
Q ss_pred EeCCccceEEEEEEEecCCCcceeeEEEEecCCCCCeEEEEEEEEeCCCC--ceEEEEEEEEeeCCCCCCccCCCceEEE
Q psy9046 69 VNNITVCEFQLSVDLAAADNFQSEYNATIKENSPGDTKVVLVSAEDASTP--CSHFRVNIKVLDVNDNRPEFKSKTYRTS 146 (215)
Q Consensus 69 id~~tg~~~~~~~~~~ld~e~~~~~~~~~~e~~~~~~~~l~v~a~D~~~~--~~~~~v~I~V~DvNdn~P~f~~~~~~~~ 146 (215)
|++.+|.+.++.. .||||....|. |.|+|+|+|++ +++++|+|+|.|+|||+|+|.+..|.+.
T Consensus 165 id~~tG~i~~~~~--~LDrE~~~~y~-------------l~V~A~D~g~~~~s~t~~v~I~V~DvNDn~P~F~~~~y~~~ 229 (550)
T 3q2v_A 165 VNRDTGVISVLTS--GLDRESYPTYT-------------LVVQAADLQGEGLSTTAKAVITVKDINDNAPVFNPSTYQGQ 229 (550)
T ss_dssp ECTTTCEEEECSS--CCCTTTCSEEE-------------EEEEEESGGGTSCCCEEEEEEEEECCSCSCCEESSSEEEEE
T ss_pred EcCCCeEEEEccC--CCCcccCcEEE-------------EEEEEEcCCCCCeeEEEEEEEEecccCCCCCEEecceeEEE
Confidence 9999998765433 79999999998 79999997544 8899999999999999999999999999
Q ss_pred EecCCCCCCCCEEEEEEEEeCCC--CC--eEEEEEeeCCCCCcEEEc----C-CeeEEEcccCCCC-ccEEEEEEEEEC
Q psy9046 147 IQENIIITPSPTLLTLEATDSDE--NP--HLTYKILSGNDDDVFAVD----D-TGILTIQGPLAKG-KTVYNLLVQVSD 215 (215)
Q Consensus 147 v~E~~~~g~~~~i~~v~a~D~D~--~~--~i~y~i~~~~~~~~F~Id----~-~G~i~~~~~ld~~-~~~y~l~V~a~D 215 (215)
|.|+ ++| +.|+++.|+|+|. ++ .+.|+|.+ +..+.|.|+ + +|.|++.++||+| ...|.|.|+|+|
T Consensus 230 V~En-~~g--~~v~~v~a~D~D~~~n~~~~~~ysi~~-~~~~~F~i~~d~~~~tG~i~~~~~LD~E~~~~y~l~V~a~D 304 (550)
T 3q2v_A 230 VPEN-EVN--ARIATLKVTDDDAPNTPAWKAVYTVVN-DPDQQFVVVTDPTTNDGILKTAKGLDFEAKQQYILHVRVEN 304 (550)
T ss_dssp EESS-CSS--CCCEEECEECCSCTTSTTTCEEEEESS-CSSCCEEEEECTTTCCEEEEESSCCCTTTCSEEEEEEEEEE
T ss_pred EecC-CCC--CEEEEEEEEECCCCCCCcEEEEEEEEe-CCCCcEEEEecCCCccEEEEecccCCccccceEEEEEEEEe
Confidence 9999 877 9999999999998 44 57799987 677899997 6 9999999999965 789999999987
No 7
>3ubh_A Neural-cadherin; cell adhesion; 2.70A {Drosophila melanogaster}
Probab=100.00 E-value=1.3e-37 Score=265.20 Aligned_cols=186 Identities=26% Similarity=0.383 Sum_probs=165.5
Q ss_pred CeEEEEEEEecCCCCCccCCCCCCCCCceEEEEecCCCCCcEEEEEEEEeCCCCceeEEEec---CCCcEEEeCCccceE
Q psy9046 1 MGTLIISIIDVNDIPPEFEPPWTRDEPNYLLEIEEEQPIGSLLGKFTALDKDSSIALYVLEQ---DGDMFSVNNITVCEF 77 (215)
Q Consensus 1 t~~v~I~V~DvND~~P~f~~~~~~~~~~~~~~V~E~~~~g~~v~~v~a~D~D~~~~~y~i~~---~~~~F~id~~tg~~~ 77 (215)
|++++|.|.| |||+|.| .+..|.++|+||.++|+.|+++.|+|+|.+..+|+|.. +.++|.|++.+|.+.
T Consensus 203 t~~v~I~V~d-ndn~P~F------~~~~y~~~v~En~~~gt~v~~v~A~D~dn~~i~Ysi~~~~~~~~~F~I~~~tG~i~ 275 (419)
T 3ubh_A 203 TPEERLSIVG-GKRAPQF------YMPSYEAEIPENQKKDSDIISIKAKSFADREIRYTLKAQGQGAGTFNIGPTSGIVK 275 (419)
T ss_dssp CCCEEEEEEE-SCCCCEE------SSSCEEEEEETTCCTTCEEEECCEECSSCCCCEEEEEESSSCCSSEEECTTTCEEE
T ss_pred ceEEEEEEEC-CCCCCce------ecCeeEEEecCCCCCCcEEEEEEEecCCCCceEEEEecCCCCCCcEEEECCCCEEE
Confidence 4678999999 9999999 58999999999999999999999999998888999962 458999999999866
Q ss_pred EEEEEEecCCCcce---eeEEEEecCCCCCeEEEEEEEEe-CCCCceEEEEEEEEeeCCCCCCccCCCceEE-EEecCCC
Q psy9046 78 QLSVDLAAADNFQS---EYNATIKENSPGDTKVVLVSAED-ASTPCSHFRVNIKVLDVNDNRPEFKSKTYRT-SIQENII 152 (215)
Q Consensus 78 ~~~~~~~ld~e~~~---~~~~~~~e~~~~~~~~l~v~a~D-~~~~~~~~~v~I~V~DvNdn~P~f~~~~~~~-~v~E~~~ 152 (215)
+.+ +||||... .|. |+|.|+| ++..+++++|+|+|+|+|||+|.|..+.|.. .|+|+++
T Consensus 276 ~~~---~LD~E~~~~~~~y~-------------l~V~a~dd~~~~s~~~~v~I~V~DvNDn~P~f~~~~~~~~~v~E~~~ 339 (419)
T 3ubh_A 276 LAK---ELDFEDLRQPHVYS-------------LIVTATEDSGGFSTSVDLTIRVTDVNDNAPKFELPDYQAHNVDEDIP 339 (419)
T ss_dssp ECS---CCCTTCTTSCSEEE-------------EEEEEECTTTSCEEEEEEEEEEECCCCCCCEESSSEEEEEEEETTCC
T ss_pred ECc---ccCccccccccEEE-------------EEEEEEeCCCCcEEEEEEEEEEEccCCCCCcccCCcceeEEecCCCC
Confidence 544 79999765 576 7899995 5555889999999999999999999999987 7999999
Q ss_pred CCCCCEEEEEEEEeCCC--CCeEEEEEeeCCCCCcEEEcCCeeEEEcccCCCC--ccEEEEEEEEEC
Q psy9046 153 ITPSPTLLTLEATDSDE--NPHLTYKILSGNDDDVFAVDDTGILTIQGPLAKG--KTVYNLLVQVSD 215 (215)
Q Consensus 153 ~g~~~~i~~v~a~D~D~--~~~i~y~i~~~~~~~~F~Id~~G~i~~~~~ld~~--~~~y~l~V~a~D 215 (215)
+| +.|++++|+|+|. |+.++|+|.+ ++|.|+++|.|++.++||++ ...|.|+|.|+|
T Consensus 340 ~g--t~v~~v~A~D~D~g~n~~v~Y~i~~----~~F~Id~~G~i~~~~~ld~E~~~~~y~l~V~a~D 400 (419)
T 3ubh_A 340 LG--TSILRVKAMDSDSGSNAEIEYLVSD----DHFAVDSNGIIVNNKQLDADNNNAYYEFIVTAKD 400 (419)
T ss_dssp TT--CEEEECCEECSSCGGGGCEEEEESC----TTEEECTTCEEEECSCSSSSCTTCEEEEEEEEEE
T ss_pred CC--CEEEEEEEEeCCCCCCCEEEEEEcC----CcEEECCCeEEEECcccCcccCCceEEEEEEEEE
Confidence 87 9999999999999 8899999964 47999999999999999966 468999999997
No 8
>3ubh_A Neural-cadherin; cell adhesion; 2.70A {Drosophila melanogaster}
Probab=100.00 E-value=5e-38 Score=267.82 Aligned_cols=188 Identities=22% Similarity=0.361 Sum_probs=165.6
Q ss_pred eEEEEEEEecCCCCCccCCCCCCCCCc--eEEEEecCCCCCcEEEEEEEEeCCCCce-eEEEecC--CCcEEEeCCccce
Q psy9046 2 GTLIISIIDVNDIPPEFEPPWTRDEPN--YLLEIEEEQPIGSLLGKFTALDKDSSIA-LYVLEQD--GDMFSVNNITVCE 76 (215)
Q Consensus 2 ~~v~I~V~DvND~~P~f~~~~~~~~~~--~~~~V~E~~~~g~~v~~v~a~D~D~~~~-~y~i~~~--~~~F~id~~tg~~ 76 (215)
++|+|.|.|+|||+|.|. ... |.+.|+|++++|+.|+++.|+|+|.|.+ .|+|..+ .++|.|++.+|.+
T Consensus 95 ~~v~I~V~DvNDn~P~F~------~~~~~~~~~v~E~~~~gt~v~~v~A~D~D~g~n~~y~i~~~~~~~~F~I~~~tG~i 168 (419)
T 3ubh_A 95 QRVIILVKDVNDEPPYFI------NRPLPMQAVVQLNAPPNTPVFTLQARDPDTDHNIHYFIVRDRTGGRFEVDERSGVV 168 (419)
T ss_dssp EEEEEEEECCCCSCCEEC------CSSSSCEEEECTTCCTTCEEEECCEECSSTTCCEEEEEEEESSSSCEEECTTTCEE
T ss_pred EEEEEEEEECCCCCCccc------CCCCcEEEEEeCCCCCCCEEEEEEEECCCCCceeEEEEEeCCCCCeEEEeCCceEE
Confidence 689999999999999994 554 8999999999999999999999999865 7999643 4799999999975
Q ss_pred EEEEEEEecCCCcceeeEEEEecCCCCCeEEEEEEEEeCCCC------ceEEEEEEEEeeCCCCCCccCCCceEEEEecC
Q psy9046 77 FQLSVDLAAADNFQSEYNATIKENSPGDTKVVLVSAEDASTP------CSHFRVNIKVLDVNDNRPEFKSKTYRTSIQEN 150 (215)
Q Consensus 77 ~~~~~~~~ld~e~~~~~~~~~~e~~~~~~~~l~v~a~D~~~~------~~~~~v~I~V~DvNdn~P~f~~~~~~~~v~E~ 150 (215)
.+.. .+|+|....|. |+|+|+|++++ ++++.++|.|.| |||+|.|.+..|.+.|.|+
T Consensus 169 ~~~~---~ld~e~~~~y~-------------l~V~A~D~g~~~~~~~~~~t~~v~I~V~d-ndn~P~F~~~~y~~~v~En 231 (419)
T 3ubh_A 169 RTRG---TDLFQLDMEYV-------------LYVKAEDQNGKVDDRRFQSTPEERLSIVG-GKRAPQFYMPSYEAEIPEN 231 (419)
T ss_dssp EECS---SSCCCBTCEEE-------------EEEEEEEEEEEC--CCEEECCCEEEEEEE-SCCCCEESSSCEEEEEETT
T ss_pred EEec---ccccccccEEE-------------EEEEEEECCCCccCcccccceEEEEEEEC-CCCCCceecCeeEEEecCC
Confidence 4422 68888888888 78999998753 677889999999 9999999999999999999
Q ss_pred CCCCCCCEEEEEEEEeCCCCCeEEEEEee-CCCCCcEEEcC-CeeEEEcccCCCCc-c---EEEEEEEEEC
Q psy9046 151 IIITPSPTLLTLEATDSDENPHLTYKILS-GNDDDVFAVDD-TGILTIQGPLAKGK-T---VYNLLVQVSD 215 (215)
Q Consensus 151 ~~~g~~~~i~~v~a~D~D~~~~i~y~i~~-~~~~~~F~Id~-~G~i~~~~~ld~~~-~---~y~l~V~a~D 215 (215)
.++| +.|+++.|+|+| |+.++|+|.. ++..++|.|++ +|.|++.++||+|. . .|.|+|+|+|
T Consensus 232 ~~~g--t~v~~v~A~D~d-n~~i~Ysi~~~~~~~~~F~I~~~tG~i~~~~~LD~E~~~~~~~y~l~V~a~d 299 (419)
T 3ubh_A 232 QKKD--SDIISIKAKSFA-DREIRYTLKAQGQGAGTFNIGPTSGIVKLAKELDFEDLRQPHVYSLIVTATE 299 (419)
T ss_dssp CCTT--CEEEECCEECSS-CCCCEEEEEESSSCCSSEEECTTTCEEEECSCCCTTCTTSCSEEEEEEEEEC
T ss_pred CCCC--cEEEEEEEecCC-CCceEEEEecCCCCCCcEEEECCCCEEEECcccCccccccccEEEEEEEEEe
Confidence 9988 999999999998 9999999984 56678999999 99999999999763 2 7999999985
No 9
>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A*
Probab=100.00 E-value=7.8e-38 Score=286.84 Aligned_cols=190 Identities=27% Similarity=0.363 Sum_probs=170.1
Q ss_pred CeEEEEEEEecCCCCCccCCCCCCCCCceEEEEecCCCCCcEEEEEEEEeCCCC------ceeEEEecCC------CcEE
Q psy9046 1 MGTLIISIIDVNDIPPEFEPPWTRDEPNYLLEIEEEQPIGSLLGKFTALDKDSS------IALYVLEQDG------DMFS 68 (215)
Q Consensus 1 t~~v~I~V~DvND~~P~f~~~~~~~~~~~~~~V~E~~~~g~~v~~v~a~D~D~~------~~~y~i~~~~------~~F~ 68 (215)
+++|+|.|.|+|||+|+| .+..|.++|+|++++|+.|+++.|+|+|.| ..+|+|.++. ++|.
T Consensus 246 ~~~v~I~V~DvNDn~P~F------~~~~y~~~V~En~~~Gt~V~~v~AtD~D~g~~~~N~~v~Ysi~~~~~~~~~~~~F~ 319 (880)
T 1q55_A 246 PMEITINVIDQNDNRPKF------TQDVFRGSVREGVQPGTQVMAVSATDEDDNIDSLNGVLSYSILKQDPEEPIPNLFT 319 (880)
T ss_dssp CEEEEEEEECCSCCCCEE------SSSCEEEEEETTCCSSEEEEECCEECCSCCSSSSTTCCEEEEEEESSCCSCSCSEE
T ss_pred eEEEEEEEEecCCCCCCc------cCCcEEEEEeCCCCCCceeEEEEEEcCCCCCCCcCcEEEEEEcCCCCCcccCCeEE
Confidence 478999999999999999 588999999999999999999999999987 2469996543 6999
Q ss_pred EeCCccceEEEEEEEecCCCcceeeEEEEecCCCCCeEEEEEEEEeCCCC--ceEEEEEEEEeeCCCCCCccCCCceEEE
Q psy9046 69 VNNITVCEFQLSVDLAAADNFQSEYNATIKENSPGDTKVVLVSAEDASTP--CSHFRVNIKVLDVNDNRPEFKSKTYRTS 146 (215)
Q Consensus 69 id~~tg~~~~~~~~~~ld~e~~~~~~~~~~e~~~~~~~~l~v~a~D~~~~--~~~~~v~I~V~DvNdn~P~f~~~~~~~~ 146 (215)
|++.+|.+.+... .||||....|. |+|+|+|.+.+ +++++|+|+|.|+|||+|+|.+..|.+.
T Consensus 320 Id~~tG~I~~~~~--~LDrE~~~~y~-------------l~V~A~D~g~~~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~ 384 (880)
T 1q55_A 320 INRETGVISLIGT--GLDREKFPEYT-------------LTVQATDLEGAGLSVEGKAIIQITDANDNAPIFDPKTYTAL 384 (880)
T ss_dssp ECTTTCEEEECSC--CCCTTTCCEEE-------------EEEEEEHHHHTSCEEECCEEEEEECCCCCCCCBSCSEEEEE
T ss_pred EccCCccEEEecc--cCCHHHcceeE-------------EEEEEEECCCCCccceeEEEEEEEeccCCCCCccccceEEE
Confidence 9999998765432 69999999998 79999998754 8899999999999999999999999999
Q ss_pred EecCCCCCCCCEEEEEEEEeCC--C--CCeEEEEEeeCCCCCcEEEc----C-CeeEEEcccCCCC-ccEEEEEEEEEC
Q psy9046 147 IQENIIITPSPTLLTLEATDSD--E--NPHLTYKILSGNDDDVFAVD----D-TGILTIQGPLAKG-KTVYNLLVQVSD 215 (215)
Q Consensus 147 v~E~~~~g~~~~i~~v~a~D~D--~--~~~i~y~i~~~~~~~~F~Id----~-~G~i~~~~~ld~~-~~~y~l~V~a~D 215 (215)
|.|+ ++| +.|++++|+|+| . |+.++|+|.+ +..+.|.|+ . +|.|++.++||+| ...|.|+|+|+|
T Consensus 385 V~En-~~g--t~V~~v~A~D~D~~~g~n~~v~Ysi~~-~~~~~F~I~~d~~~~~G~i~~~~~LD~E~~~~y~l~V~A~D 459 (880)
T 1q55_A 385 VPEN-EIG--FEVQRLSVTDLDMPGTPAWQAVYKIRV-NEGGFFNITTDPESNQGILTTAKGLDFELRKQYVLQITVEN 459 (880)
T ss_dssp EESS-SCC--CEEEEECBCCCSCTTSTTSCEECCBSC-CTTSCEEEEECTTTCCEEEEESSCCCCSSCCCEEEEECCEE
T ss_pred eecC-CCC--cEEEEEEEECCCCCCCCCceEEEEEec-CCCceEEEEecCCCceEEEecccCCCcccCCcEEEEEEEEE
Confidence 9999 877 999999999999 4 7899999988 777899994 2 7999999999965 789999999987
No 10
>3q2v_A Cadherin-1; cell adhesion, calcium binding; HET: MAN; 3.40A {Mus musculus}
Probab=100.00 E-value=2.9e-36 Score=264.82 Aligned_cols=188 Identities=19% Similarity=0.342 Sum_probs=168.6
Q ss_pred CeEEEEEEEecCCCCCccCCCCCCCCCceEEEEecCCCCCcEEEEEEEEeCCCCce-----eEEEec-CCCcEEEe----
Q psy9046 1 MGTLIISIIDVNDIPPEFEPPWTRDEPNYLLEIEEEQPIGSLLGKFTALDKDSSIA-----LYVLEQ-DGDMFSVN---- 70 (215)
Q Consensus 1 t~~v~I~V~DvND~~P~f~~~~~~~~~~~~~~V~E~~~~g~~v~~v~a~D~D~~~~-----~y~i~~-~~~~F~id---- 70 (215)
|++|+|.|.|+|||+|+| ....|.+.|+|+ ++|+.|+++.|+|+|.+.+ .|+|.. ..++|.|+
T Consensus 204 t~~v~I~V~DvNDn~P~F------~~~~y~~~V~En-~~g~~v~~v~a~D~D~~~n~~~~~~ysi~~~~~~~F~i~~d~~ 276 (550)
T 3q2v_A 204 TAKAVITVKDINDNAPVF------NPSTYQGQVPEN-EVNARIATLKVTDDDAPNTPAWKAVYTVVNDPDQQFVVVTDPT 276 (550)
T ss_dssp EEEEEEEEECCSCSCCEE------SSSEEEEEEESS-CSSCCCEEECEECCSCTTSTTTCEEEEESSCSSCCEEEEECTT
T ss_pred EEEEEEEecccCCCCCEE------ecceeEEEEecC-CCCCEEEEEEEEECCCCCCCcEEEEEEEEeCCCCcEEEEecCC
Confidence 578999999999999999 588999999999 9999999999999999754 499974 45799998
Q ss_pred CCccceEEEEEEEecCCCcceeeEEEEecCCCCCeEEEEEEEEeCCC-----CceEEEEEEEEeeCCCCCCccCCCceEE
Q psy9046 71 NITVCEFQLSVDLAAADNFQSEYNATIKENSPGDTKVVLVSAEDAST-----PCSHFRVNIKVLDVNDNRPEFKSKTYRT 145 (215)
Q Consensus 71 ~~tg~~~~~~~~~~ld~e~~~~~~~~~~e~~~~~~~~l~v~a~D~~~-----~~~~~~v~I~V~DvNdn~P~f~~~~~~~ 145 (215)
..+|.+.+.+ .||||....|. |+|+|+|++. .+++++|+|+|+|+|| +|.|....|.+
T Consensus 277 ~~tG~i~~~~---~LD~E~~~~y~-------------l~V~a~D~~~~~~~~~~~~~~v~I~V~DvND-~P~f~~~~~~~ 339 (550)
T 3q2v_A 277 TNDGILKTAK---GLDFEAKQQYI-------------LHVRVENEEPFEGSLVPSTATVTVDVVDVNE-APIFMPAERRV 339 (550)
T ss_dssp TCCEEEEESS---CCCTTTCSEEE-------------EEEEEEESSCCCSSCCCEEEEEEEEEECCCC-CCEESSSSCEE
T ss_pred CccEEEEecc---cCCccccceEE-------------EEEEEEeCCCCCCCccceEEEEEEEEEecCC-CCeEcCcceEE
Confidence 6788754443 79999999998 7899999863 3789999999999999 99999999999
Q ss_pred EEecCCCCCCCCEEEEEEEEeCCC--CCeEEEEEeeCCCCCcEEEcC-CeeEEEcccCCCC-c-----cEEEEEEEEEC
Q psy9046 146 SIQENIIITPSPTLLTLEATDSDE--NPHLTYKILSGNDDDVFAVDD-TGILTIQGPLAKG-K-----TVYNLLVQVSD 215 (215)
Q Consensus 146 ~v~E~~~~g~~~~i~~v~a~D~D~--~~~i~y~i~~~~~~~~F~Id~-~G~i~~~~~ld~~-~-----~~y~l~V~a~D 215 (215)
.|+|++++| +.|++++|+|+|. |+.++|+|.+ +..++|.|++ +|.|++.+.||+| . ..|.|+|.|+|
T Consensus 340 ~v~E~~~~g--t~v~~v~A~D~D~g~n~~i~y~i~~-~~~~~f~id~~tG~i~~~~~lDrE~~~~~~~~~y~l~V~A~D 415 (550)
T 3q2v_A 340 EVPEDFGVG--QEITSYTAREPDTFMDQKITYRIWR-DTANWLEINPETGAIFTRAEMDREDAEHVKNSTYVALIIATD 415 (550)
T ss_dssp EEETTCCSS--CEEEECCEECCCCSTTCCCEEEEEE-CTTCCEEECTTTCEEEECSCCCTTCTTTCCSSEEEEEEEEEC
T ss_pred EEecCCCCC--CEEEEEeCCCCCCCCCCCEEEEEec-CCCCcEEEeCCCcEEEECCccCcccccccCCCEEEEEEEEEe
Confidence 999999988 9999999999998 8999999976 4568899999 9999999999976 4 79999999998
No 11
>3q2w_A Cadherin-2; cell adhesion, calcium binding; HET: MAN NAG; 3.20A {Mus musculus}
Probab=100.00 E-value=1e-35 Score=261.78 Aligned_cols=188 Identities=27% Similarity=0.395 Sum_probs=166.7
Q ss_pred CeEEEEEEEecCCCCCccCCCCCCCCCceEEEEecCCCCCcEEEEEEEEeCCCCc-----eeEEEecC--CCcEEE----
Q psy9046 1 MGTLIISIIDVNDIPPEFEPPWTRDEPNYLLEIEEEQPIGSLLGKFTALDKDSSI-----ALYVLEQD--GDMFSV---- 69 (215)
Q Consensus 1 t~~v~I~V~DvND~~P~f~~~~~~~~~~~~~~V~E~~~~g~~v~~v~a~D~D~~~-----~~y~i~~~--~~~F~i---- 69 (215)
|++|+|.|.|+|||+|.| ....|.+.|+|+. +|+.|+++.|+|+|.+. ..|+|..+ .+.|.|
T Consensus 206 t~~v~I~V~DvNDn~P~f------~~~~y~~~V~En~-~g~~v~~v~a~D~D~~~~~n~~~~y~i~~g~~~~~F~I~~~~ 278 (559)
T 3q2w_A 206 TATAVITVTDVNDNPPEF------TAMTFYGEVPENR-VDVIVANLTVTDKDQPHTPAWNAAYRISGGDPTGRFAILTDP 278 (559)
T ss_dssp EEEEEEEEECCSCSCCEE------SSSEEEEEEESSC-SSEEEEEEEEECCSCTTSTTTSBCCEEEESCTTCCEEEEECT
T ss_pred eEEEEEEEEeCCCCCCcc------ccccceeEecCCC-CCcEEEEEEEEcCCCCCCCceeEEEEEecCCCCCceEEEecC
Confidence 478999999999999999 5889999999997 79999999999999864 46999755 489999
Q ss_pred eCCccceEEEEEEEecCCCcceeeEEEEecCCCCCeEEEEEEEEeCCC--------CceEEEEEEEEeeCCCCCCccCCC
Q psy9046 70 NNITVCEFQLSVDLAAADNFQSEYNATIKENSPGDTKVVLVSAEDAST--------PCSHFRVNIKVLDVNDNRPEFKSK 141 (215)
Q Consensus 70 d~~tg~~~~~~~~~~ld~e~~~~~~~~~~e~~~~~~~~l~v~a~D~~~--------~~~~~~v~I~V~DvNdn~P~f~~~ 141 (215)
+..+|.+.+.+ +||||....|. |+|.|+|++. .+++++|+|+|.|+|| +|.|.+.
T Consensus 279 ~~~~G~i~~~~---~LD~E~~~~y~-------------l~V~A~D~~~~~~g~~~~~~s~~~v~I~V~DvND-~P~f~~~ 341 (559)
T 3q2w_A 279 NSNDGLVTVVK---PIDFETNRMFV-------------LTVAAENQVPLAKGIQHPPQSTATVSVTVIDVNE-NPYFAPN 341 (559)
T ss_dssp TTCEEEEEECS---CCCTTTCSEEE-------------EEEECCBSSCCCTTCCCCGGGEEEEEEEEECCCC-CCEESSS
T ss_pred CCCcEEEEeCC---CCCCccCceEE-------------EEEEEEcCCccccCCCCCCceEEEEEEEEEeCCC-CCccccc
Confidence 46778754443 79999999998 7899999742 2789999999999999 6999999
Q ss_pred ceEEEEecCCCCCCCCEEEEEEEEeCCC--CCeEEEEEeeCCCCCcEEEcC-CeeEEEcccCCCCc-----cEEEEEEEE
Q psy9046 142 TYRTSIQENIIITPSPTLLTLEATDSDE--NPHLTYKILSGNDDDVFAVDD-TGILTIQGPLAKGK-----TVYNLLVQV 213 (215)
Q Consensus 142 ~~~~~v~E~~~~g~~~~i~~v~a~D~D~--~~~i~y~i~~~~~~~~F~Id~-~G~i~~~~~ld~~~-----~~y~l~V~a 213 (215)
.|.+.|.|+.+.| +.|++++|+|+|. |+.++|+|.++ ..++|.|++ +|.|++.+.||+|. ..|.|+|+|
T Consensus 342 ~~~~~v~En~~~g--~~v~~v~A~D~D~g~n~~i~Ysi~~~-~~~~f~Id~~tG~i~~~~~lDrE~~~~~~~~y~l~V~A 418 (559)
T 3q2w_A 342 PKIIRQEEGLHAG--TMLTTLTAQDPDRYMQQNIRYTKLSD-PANWLKIDPVNGQITTIAVLDRESPNVKNNIYNATFLA 418 (559)
T ss_dssp EEEEEEESCCCTT--CEEEECCEECSCSSSCCCEEEEEEEC-TTCCEEECTTTCEEEESSCCCSSSTTSCSSEEEEEEEE
T ss_pred ceEEEEeCCCCCC--CEEEEEEEECCCCCCCCceEEEEccC-CccceEecCCceEEEEccccCcccccccCCEEEEEEEE
Confidence 9999999999987 9999999999998 88999999874 568899999 99999999999763 899999999
Q ss_pred EC
Q psy9046 214 SD 215 (215)
Q Consensus 214 ~D 215 (215)
+|
T Consensus 419 ~D 420 (559)
T 3q2w_A 419 SD 420 (559)
T ss_dssp EE
T ss_pred Ec
Confidence 97
No 12
>1l3w_A EP-cadherin, C-cadherin; cell adhesion, calcium binding, extracellular, ECT metal binding protein; HET: NAG NDG; 3.08A {Xenopus laevis} SCOP: b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1
Probab=100.00 E-value=5.3e-36 Score=262.93 Aligned_cols=188 Identities=27% Similarity=0.424 Sum_probs=165.5
Q ss_pred CeEEEEEEEecCCCCCccCCCCCCCCCceEEEEecCCCCCcEEEEEEEEeCC--CC---ceeEEEec-CCCcEEEeC---
Q psy9046 1 MGTLIISIIDVNDIPPEFEPPWTRDEPNYLLEIEEEQPIGSLLGKFTALDKD--SS---IALYVLEQ-DGDMFSVNN--- 71 (215)
Q Consensus 1 t~~v~I~V~DvND~~P~f~~~~~~~~~~~~~~V~E~~~~g~~v~~v~a~D~D--~~---~~~y~i~~-~~~~F~id~--- 71 (215)
+++|+|.|.|+|||+|+| ....|.+.|+|+ ++|+.|+++.|+|+| .+ ...|+|.. +.+.|.|+.
T Consensus 210 ~~~v~I~V~DvNDn~P~F------~~~~y~~~V~En-~~gt~v~~v~A~D~D~~~g~n~~v~y~i~~~~~~~F~I~~d~~ 282 (546)
T 1l3w_A 210 EGKAIIQITDANDNAPIF------DPKTYTALVPEN-EIGFEVQRLSVTDLDMPGTPAWQAVYKIRVNEGGFFNITTDPE 282 (546)
T ss_dssp ECCEEEEEECCCCCCCCB------SCSEEEEEEESS-SCCCEEEEECBCCCSCTTSTTSCEECCBSCCTTSCEEEEECTT
T ss_pred EEEEEEEEeecCCCCCcc------ccccceEEEEeC-CCCCEEEEEEEEeCCCCCCCCcEEEEEEEeCCCceEEEEecCC
Confidence 467999999999999999 578899999999 999999999999999 44 34799975 557999962
Q ss_pred -CccceEEEEEEEecCCCcceeeEEEEecCCCCCeEEEEEEEEeCCC-----CceEEEEEEEEeeCCCCCCccCCCceEE
Q psy9046 72 -ITVCEFQLSVDLAAADNFQSEYNATIKENSPGDTKVVLVSAEDAST-----PCSHFRVNIKVLDVNDNRPEFKSKTYRT 145 (215)
Q Consensus 72 -~tg~~~~~~~~~~ld~e~~~~~~~~~~e~~~~~~~~l~v~a~D~~~-----~~~~~~v~I~V~DvNdn~P~f~~~~~~~ 145 (215)
.+|.+.+.+ +||||....|. |+|+|+|++. .+++++|+|+|.|+|| +|.|.+..|.+
T Consensus 283 ~~~G~i~~~~---~LD~E~~~~y~-------------l~V~a~D~~~~~~~~~s~~~~v~I~V~DvND-~P~f~~~~y~~ 345 (546)
T 1l3w_A 283 SNQGILTTAK---GLDFELRKQYV-------------LQITVENAEPFSVPLPTSTATVTVTVEDVNE-APFFVPAVSRV 345 (546)
T ss_dssp TCCEEEEESS---CCCCSSCCCEE-------------EEECCEESSCCSSCCCCCCEEEEEEEECCCC-CCEESSCEECC
T ss_pred CCeEEEEECc---cCCcccccEEE-------------EEEEEEECCCCCCCCcceeEEEEEEEEcCCC-CCcEecceEEE
Confidence 567654433 79999999998 7899999763 3789999999999999 99999999999
Q ss_pred EEecCCCCCCCCEEEEEEEEeCCC--CCeEEEEEeeCCCCCcEEEcC-CeeEEEcccCCCCc-----cEEEEEEEEEC
Q psy9046 146 SIQENIIITPSPTLLTLEATDSDE--NPHLTYKILSGNDDDVFAVDD-TGILTIQGPLAKGK-----TVYNLLVQVSD 215 (215)
Q Consensus 146 ~v~E~~~~g~~~~i~~v~a~D~D~--~~~i~y~i~~~~~~~~F~Id~-~G~i~~~~~ld~~~-----~~y~l~V~a~D 215 (215)
.|.|+.++| +.|+++.|+|+|. |+.++|+|.++ ..++|.|++ +|.|++.++||+|. ..|.|+|+|+|
T Consensus 346 ~V~En~~~g--~~v~~v~A~D~D~g~n~~i~ysi~~~-~~~~F~Id~~tG~i~~~~~lD~E~~~~~~~~y~l~V~a~D 420 (546)
T 1l3w_A 346 DVSEDLSRG--EKIISLVAQDPDKQQIQKLSYFIGND-PARWLTVNKDNGIVTGNGNLDRESEYVKNNTYTVIMLVTD 420 (546)
T ss_dssp CBCTTCCSS--EEEEECCEECCCTTCCCCEEEEECCC-SSCCCEEETTTTEEEECSCCCTTSSSCCSSCCEEEEEEEE
T ss_pred EEeCCCCCC--CEEEEEEEECCCCCCCceEEEEECCC-CCCcEEEeCCcEEEEECCccCCccccCCCCEEEEEEEEEE
Confidence 999999987 9999999999998 88999999864 468899999 99999999999764 79999999987
No 13
>2x2u_A Proto-oncogene tyrosine-protein kinase receptor RET; hirschsprung disease, extracellular domain, disease mutation, transferase, glycoprotein; HET: NAG SO4; 2.00A {Homo sapiens}
Probab=100.00 E-value=5.4e-37 Score=243.99 Aligned_cols=184 Identities=14% Similarity=0.042 Sum_probs=150.0
Q ss_pred CCCceEEEEecCCCCCcEEEEEEEEeCCCCc-eeEEEe----------c-CCCcEEEeCCccceEEEEEEEecCCCccee
Q psy9046 25 DEPNYLLEIEEEQPIGSLLGKFTALDKDSSI-ALYVLE----------Q-DGDMFSVNNITVCEFQLSVDLAAADNFQSE 92 (215)
Q Consensus 25 ~~~~~~~~V~E~~~~g~~v~~v~a~D~D~~~-~~y~i~----------~-~~~~F~id~~tg~~~~~~~~~~ld~e~~~~ 92 (215)
.+..|.++|+|++++|+.|+++.|+|+|.|. ..|+|. . ...+|.|++.+|.+.+.+ .||||....
T Consensus 4 ~~~~Y~~~V~E~~~~Gt~v~~v~A~D~D~g~~~~~~i~~~~~~~y~i~~~~~~~F~Id~~tG~i~~~~---~LDrE~~~~ 80 (246)
T 2x2u_A 4 SRDAYWEKLYVDQAAGTPLLYVHALRDAPEEVPSFRLGQHLYGTYRTRLHENNWIRIQEDTGLLYLQR---SLDHSSWEK 80 (246)
T ss_dssp SCSEEEEEEETTBCTTCEEEECCEECSSTTCCCCCEECSEEECGGGCEEEECCSEEECTTTCEEEESS---CBCHHHHHH
T ss_pred cCCceEEEeeCCCCCCCEEEEEEEEcCCCCCcceEEEeeccccceeccCCCCCEEEECCCcEEEEECC---cCChhHhhh
Confidence 5889999999999999999999999999864 245553 1 358999999999866544 799999988
Q ss_pred eEEEEecCCCCCeEEEEEEEEeCCCC----ceEEEEEEEEeeCCCCCCc----------cCCCceEEEEecCCCCCCCCE
Q psy9046 93 YNATIKENSPGDTKVVLVSAEDASTP----CSHFRVNIKVLDVNDNRPE----------FKSKTYRTSIQENIIITPSPT 158 (215)
Q Consensus 93 ~~~~~~e~~~~~~~~l~v~a~D~~~~----~~~~~v~I~V~DvNdn~P~----------f~~~~~~~~v~E~~~~g~~~~ 158 (215)
|.. ..-..+.....|+|.|+|++.+ +++++|.|+|.|+|||+|+ |.+..|.+.|.|+.++| +.
T Consensus 81 y~~-~~~G~p~~~~~l~V~a~D~g~~~~~~~~~~~v~I~V~DvNDn~P~~~~~~~~~~~F~~~~y~~~v~En~~~G--t~ 157 (246)
T 2x2u_A 81 LSV-RNRGFPLLTVYLKVFLSPTSLREGECQWPGCARVYFSFFNTSFPACSSLKPRELCFPETRPSFRIRENRPPG--TF 157 (246)
T ss_dssp HHH-TSTTSCCCEEEEEEECC-------CCCTTTEEEEEEEEESSCCCCGGGCCHHHHHSCSSCCCEEEEBTSCCC--EE
T ss_pred hcc-ccCCCcccceEEEEEEEcCCCCCCcccceEEEEEEEEECCCCCCccccccccccccCCCcEEEEEECCCCCC--cE
Confidence 810 0000011112279999999865 5688999999999999999 99999999999999988 99
Q ss_pred EEEEEEEeCCC--CCeEEEEEeeCCCCCcEEEcC-CeeEEEcccCCCC-ccEEEEEEEEEC
Q psy9046 159 LLTLEATDSDE--NPHLTYKILSGNDDDVFAVDD-TGILTIQGPLAKG-KTVYNLLVQVSD 215 (215)
Q Consensus 159 i~~v~a~D~D~--~~~i~y~i~~~~~~~~F~Id~-~G~i~~~~~ld~~-~~~y~l~V~a~D 215 (215)
|++++|+|+|. |+.++|+|.+++ ..+|.|++ +|.|++.++||+| ...|.|+|.|+|
T Consensus 158 v~~v~A~D~D~g~n~~i~Y~i~~~~-~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~d 217 (246)
T 2x2u_A 158 HQFRLLPVQFLCPQISVAYRLLEGE-GLPFRSAPDSLEVSTRWALDREQREKYELVAVCTV 217 (246)
T ss_dssp EECSCHHHHHHCTTSCEEEEEESCT-TSSEECCTTCCEEEESSCBCTTTCSEEEEEEEEEE
T ss_pred EEEEEEEcCCCCCCcEEEEEEccCC-CCCEEEECCcCEEEeCCccCccccceEEEEEEEEe
Confidence 99999999998 899999999865 67899999 9999999999965 789999999875
No 14
>3ppe_A Vascular endothelial cadherin; extracellular cadherin (EC) domain, beta barrel, IG-domain L domain swapped dimer interface; 2.10A {Gallus gallus}
Probab=100.00 E-value=1.7e-34 Score=223.45 Aligned_cols=166 Identities=26% Similarity=0.444 Sum_probs=149.4
Q ss_pred eEEEEecCCCCC--cEEEEEEEEeCCCCceeEEEecC--CCcEEEeCCccceEEEEEEEecCCCcceeeEEEEecCCCCC
Q psy9046 29 YLLEIEEEQPIG--SLLGKFTALDKDSSIALYVLEQD--GDMFSVNNITVCEFQLSVDLAAADNFQSEYNATIKENSPGD 104 (215)
Q Consensus 29 ~~~~V~E~~~~g--~~v~~v~a~D~D~~~~~y~i~~~--~~~F~id~~tg~~~~~~~~~~ld~e~~~~~~~~~~e~~~~~ 104 (215)
..++|+||.+.| ..|+++. +|+|.+.+.|+|..+ .++|.|++.+|.+.+.+ .||||....|.
T Consensus 5 ~~~~V~En~~~~~~~~v~~v~-~D~D~g~~~Y~i~~~~~~~~F~Id~~tG~i~~~~---~LDrE~~~~y~---------- 70 (203)
T 3ppe_A 5 NRMHIREEIDSPLPHHVGKLT-SSVGNKNAMYIIEGESANTIFKVQGYDGDIYAFE---RLDREKKAEYE---------- 70 (203)
T ss_dssp SEEEEETTCCSSSCEEEEECC-BCCCCTTEEEEEEETTBTTTEEEETTTTEEEESS---CCCTTTCCEEE----------
T ss_pred ccEEEEccCCCCCCEEEEEEE-ecCCCCCcEEEEecCCCCCeEEEECCcCEEEECc---cccccccceEE----------
Confidence 468999999988 8889998 999999889999765 35899999999866544 79999999998
Q ss_pred eEEEEEEEEeCCCC---ceEEEEEEEEeeCCCCCCccCCCceEEEEecCCCCCCCCEEEEEEEEeCCC-----CCeEEEE
Q psy9046 105 TKVVLVSAEDASTP---CSHFRVNIKVLDVNDNRPEFKSKTYRTSIQENIIITPSPTLLTLEATDSDE-----NPHLTYK 176 (215)
Q Consensus 105 ~~~l~v~a~D~~~~---~~~~~v~I~V~DvNdn~P~f~~~~~~~~v~E~~~~g~~~~i~~v~a~D~D~-----~~~i~y~ 176 (215)
|+|.|+|++.+ ++++.|.|+|.|+|||+|.|.+..|.+.|.|++++| +.|++++|+|+|. |+.++|+
T Consensus 71 ---l~v~a~D~g~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~g--t~v~~v~A~D~D~~~~g~n~~i~Y~ 145 (203)
T 3ppe_A 71 ---LTAHIIDRRNNRSLEPPSKFIIKVSDINDNAPIFVQKIFNGSVPEMSRLG--TSVTKVTAEDADDPTVAGHATVTYQ 145 (203)
T ss_dssp ---EEEEEEETTTTEECSCCEEEEEEEECCCCCCCEESCSEEEEEEETTCCTT--CEEEECCEECCSCTTSSSTTCEEEE
T ss_pred ---EEEEEEECCCCCcccceEEEEEEEcCCCCCCCCccCCccEEEEeccCCCC--cEEEEEEEEcCCCcCCCCceEEEEE
Confidence 79999999864 678999999999999999999999999999999988 9999999999993 7899999
Q ss_pred EeeCCCCCcEEEcCCeeEEEc-ccCCCC-ccEEEEEEEEEC
Q psy9046 177 ILSGNDDDVFAVDDTGILTIQ-GPLAKG-KTVYNLLVQVSD 215 (215)
Q Consensus 177 i~~~~~~~~F~Id~~G~i~~~-~~ld~~-~~~y~l~V~a~D 215 (215)
|.+++ ..|.|+.+|.|++. ++||+| ...|.|.|+|+|
T Consensus 146 i~~~~--~~F~I~~tG~i~~~~~~LD~E~~~~y~l~V~A~D 184 (203)
T 3ppe_A 146 IIKGN--EYFTVDDSGVIFTARADLDRESQSAYEIIVKAKD 184 (203)
T ss_dssp EEEST--TTEEECTTSEEEESCSCCCTTTCSEEEEEEEEEE
T ss_pred EeCCC--CcEEEeCCeEEEECCcCCCcccCCEEEEEEEEEe
Confidence 99865 48999999999999 999965 789999999997
No 15
>2a4e_A Cadherin-11; dimer, calcium binding, cell adhesion; 3.20A {Mus musculus}
Probab=100.00 E-value=2.1e-34 Score=224.65 Aligned_cols=167 Identities=26% Similarity=0.447 Sum_probs=147.4
Q ss_pred ceEEEEecCC--CCCcEEEEEEEEeCCCC--ceeEEEecCC--CcEEEeCCccceEEEEEEEecCCCcceeeEEEEecCC
Q psy9046 28 NYLLEIEEEQ--PIGSLLGKFTALDKDSS--IALYVLEQDG--DMFSVNNITVCEFQLSVDLAAADNFQSEYNATIKENS 101 (215)
Q Consensus 28 ~~~~~V~E~~--~~g~~v~~v~a~D~D~~--~~~y~i~~~~--~~F~id~~tg~~~~~~~~~~ld~e~~~~~~~~~~e~~ 101 (215)
.|.+.|.|+. |.|+.|+++ |+|+|.| ...|+|.+++ .+|.|++.+|.+.+.+ .||||....|.
T Consensus 5 ~~~~~v~En~~~p~~~~v~~v-a~D~D~gn~~i~Y~l~~~~~~~~F~Id~~tG~i~~~~---~LDrE~~~~y~------- 73 (215)
T 2a4e_A 5 WNQFFVIEEYTGPDPVLVGRL-HSDIDSGDGNIKYILSGEGAGTIFVIDDKSGNIHATK---TLDREERAQYT------- 73 (215)
T ss_dssp CCEEEEETTCCSSSCEEEEEC-CCTTCCSSSCEEEEEEETTBTTTEEECTTTCEEEECS---CCCTTTCSEEE-------
T ss_pred EeeEEEeccCCCCCCEEEEEE-EECCCCCCCeEEEEEECCCCCCeEEEECCceEEEECC---ccCCccCCEEE-------
Confidence 4688999994 579999998 8999986 3479997653 6899999999865544 79999999998
Q ss_pred CCCeEEEEEEEEeCCC-C--ceEEEEEEEEeeCCCCCCccCCCceEEEEecCCCCCCCCEEEEEEEEeCCC-----CCeE
Q psy9046 102 PGDTKVVLVSAEDAST-P--CSHFRVNIKVLDVNDNRPEFKSKTYRTSIQENIIITPSPTLLTLEATDSDE-----NPHL 173 (215)
Q Consensus 102 ~~~~~~l~v~a~D~~~-~--~~~~~v~I~V~DvNdn~P~f~~~~~~~~v~E~~~~g~~~~i~~v~a~D~D~-----~~~i 173 (215)
|+|.|+|++. + ++++.|.|+|.|+|||+|.|.+..|.+.|.|++++| +.|++++|+|+|. |+.+
T Consensus 74 ------l~v~a~D~~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~G--t~v~~v~A~D~D~~~~G~n~~i 145 (215)
T 2a4e_A 74 ------LMAQAVDRDTNRPLEPPSEFIVKVQDINDNPPEFLHEIYHANVPERSNVG--TSVIQVTASDADDPTYGNSAKL 145 (215)
T ss_dssp ------EEEEEEETTTCCEEEEEEEEEEEEECCCCCCCEESSSSEEEEEETTCCTT--CEEEECCEECSSCTTTCSSSCC
T ss_pred ------EEEEEEECCCCCcccccEEEEEEEeeCCCCCCCccCCceEEEEECCCCCC--CEEEEEEEEECCCCCCCCceEE
Confidence 7899999875 2 678899999999999999999999999999999988 9999999999994 6799
Q ss_pred EEEEeeCCCCCcEEEcC-CeeEEEc-ccCCCC-ccEEEEEEEEEC
Q psy9046 174 TYKILSGNDDDVFAVDD-TGILTIQ-GPLAKG-KTVYNLLVQVSD 215 (215)
Q Consensus 174 ~y~i~~~~~~~~F~Id~-~G~i~~~-~~ld~~-~~~y~l~V~a~D 215 (215)
+|+|.+++ ..|.|++ +|.|++. ++||+| ...|.|.|+|+|
T Consensus 146 ~Y~i~~~~--~~F~Id~~tG~I~~~~~~LD~E~~~~y~l~V~A~D 188 (215)
T 2a4e_A 146 VYSILEGQ--PYFSVEAQTGIIRTALPNMDREAKEEYHVVIQAKD 188 (215)
T ss_dssp EEEEEEST--TTEEECTTTCEEEECSSCCCSSSCSEEEEEEEEET
T ss_pred EEEEeCCC--CcEEEeCCccEEEEcccCCCcccCCEEEEEEEEEE
Confidence 99999864 5899999 9999999 999965 789999999998
No 16
>2qvi_A Cadherin-2; beta barrel, strand SWAP, domain SWAP, calcium, cell adhesion, cleavage on PAIR of basic residues, glycoprotein, membrane; 3.01A {Mus musculus} SCOP: b.1.6.1 b.1.6.1 PDB: 1ncj_A
Probab=100.00 E-value=9.6e-35 Score=226.70 Aligned_cols=167 Identities=23% Similarity=0.386 Sum_probs=147.9
Q ss_pred EEEEecCCCCCcEEEEEEEEeCCCCc---eeEEEecC------CCcEEEeCCccceEEEEEEEecCCCcceeeEEEEecC
Q psy9046 30 LLEIEEEQPIGSLLGKFTALDKDSSI---ALYVLEQD------GDMFSVNNITVCEFQLSVDLAAADNFQSEYNATIKEN 100 (215)
Q Consensus 30 ~~~V~E~~~~g~~v~~v~a~D~D~~~---~~y~i~~~------~~~F~id~~tg~~~~~~~~~~ld~e~~~~~~~~~~e~ 100 (215)
.++|+||++ |+.++.+.|.|.|.+. ..|+|.++ .++|.|++.+|.+.+.+ .||||....|.
T Consensus 6 ~~~V~En~~-g~~~~~v~~~~~D~~~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~---~LDrE~~~~y~------ 75 (215)
T 2qvi_A 6 PINLPENSR-GPFPQELVRIRSDRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTK---PLDRELIARFH------ 75 (215)
T ss_dssp CEEEESSCC-CCSSEEEEECCCGGGGTSCEEEEEESTTSSSTTCSSEEECTTTCEEEECS---CCCTTTCSEEE------
T ss_pred cEEEcCCCC-CCCCEEEEEEeCCCCCCceEEEEEECCCCCCCCCCcEEEeCCccEEEECc---ccCcccCCeEE------
Confidence 678999999 8888888888888754 47999754 47999999999865543 79999999998
Q ss_pred CCCCeEEEEEEEEeCCCC--ceEEEEEEEEeeCCCCCCccCCCceEEEEecCCCCCCCCEEEEEEEEeCCC----CCeEE
Q psy9046 101 SPGDTKVVLVSAEDASTP--CSHFRVNIKVLDVNDNRPEFKSKTYRTSIQENIIITPSPTLLTLEATDSDE----NPHLT 174 (215)
Q Consensus 101 ~~~~~~~l~v~a~D~~~~--~~~~~v~I~V~DvNdn~P~f~~~~~~~~v~E~~~~g~~~~i~~v~a~D~D~----~~~i~ 174 (215)
|+|.|+|++.+ ++++.|.|+|.|+|||+|.|.+..|.+.|.|++++| +.|++++|+|+|. |+.++
T Consensus 76 -------l~v~a~D~g~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~g--t~v~~v~A~D~D~~~g~n~~i~ 146 (215)
T 2qvi_A 76 -------LRAHAVDINGNQVENPIDIVINVIDMNDNRPEFLHQVWNGSVPEGSKPG--TYVMTVTAIDADDPNALNGMLR 146 (215)
T ss_dssp -------EEEEEEETTTCCCEEEEEEEEEEECCCCCCCBCSSSEEEEEECSSCCTT--CEEEECCCBCSSCTTSTTTCCC
T ss_pred -------EEEEEEECCCCceeeeEEEEEEEeECCCCCCcccCceeEEEEeCCCCCC--CEEEEEEEEeCCCCCCCCcEEE
Confidence 79999999876 678999999999999999999999999999999988 9999999999996 78999
Q ss_pred EEEeeCC----CCCcEEEcC-CeeEEEc-ccCCCC-ccEEEEEEEEEC
Q psy9046 175 YKILSGN----DDDVFAVDD-TGILTIQ-GPLAKG-KTVYNLLVQVSD 215 (215)
Q Consensus 175 y~i~~~~----~~~~F~Id~-~G~i~~~-~~ld~~-~~~y~l~V~a~D 215 (215)
|+|.+++ ..+.|.|++ +|.|++. ++||+| ...|.|.|+|+|
T Consensus 147 Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~~LD~E~~~~y~l~V~a~D 194 (215)
T 2qvi_A 147 YRILSQAPSTPSPNMFTINNETGDIITVAAGLDREKVQQYTLIIQATD 194 (215)
T ss_dssp CEEEECSSCCSSTTCEEECTTTCEEEECSCCCCTTTCSEEEEEEECCT
T ss_pred EEEecCCCCCCcCCeEEEcCCCcEEEEecCCCCcccCCeEEEEEEEEE
Confidence 9999876 468899999 9999995 799965 789999999987
No 17
>3k5r_A Cadherin 13; mouse, structural protein; 2.00A {Mus musculus} PDB: 3k5s_A
Probab=100.00 E-value=1.4e-34 Score=226.35 Aligned_cols=167 Identities=25% Similarity=0.344 Sum_probs=148.1
Q ss_pred EEEEecCCCCC--cEEEEEEEEeCCCCceeEEEecC------CCcEEEeCCccceEEEEEEEecCCCcceeeEEEEecCC
Q psy9046 30 LLEIEEEQPIG--SLLGKFTALDKDSSIALYVLEQD------GDMFSVNNITVCEFQLSVDLAAADNFQSEYNATIKENS 101 (215)
Q Consensus 30 ~~~V~E~~~~g--~~v~~v~a~D~D~~~~~y~i~~~------~~~F~id~~tg~~~~~~~~~~ld~e~~~~~~~~~~e~~ 101 (215)
.++|+||.+.| ..++++.|+|+|. ...|+|..+ .++|.|++.+|.+.+.+ .||||....|.
T Consensus 7 ~~~V~En~~~g~~~~v~~v~a~D~d~-~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~---~LDrE~~~~y~------- 75 (218)
T 3k5r_A 7 PILIPENQRQPFPRDVGKVVDSDRPE-GSKFRLTGKGVDQDPKGTFRINENTGSVSVTR---TLDRETIATYQ------- 75 (218)
T ss_dssp CEEEETTCCSSCCEEEEECBCTTCCT-TCEEEEEEBTTTBSSTTSEEECTTTCEEEECS---CCCTTTCSEEE-------
T ss_pred cEEEecCCCCCCCEEEEEEEecCCCc-eEEEEEEcCCCCCCCCCeEEEeCCceEEEECC---cCCcccCCEEE-------
Confidence 68899999998 8899999999998 668999542 37999999999866554 79999999998
Q ss_pred CCCeEEEEEEEEeCCCC--ceEEEEEEEEeeCCCCCCccCCCceEEEEecCCCCCCCCEEEEEEEEeCCC----CCeEEE
Q psy9046 102 PGDTKVVLVSAEDASTP--CSHFRVNIKVLDVNDNRPEFKSKTYRTSIQENIIITPSPTLLTLEATDSDE----NPHLTY 175 (215)
Q Consensus 102 ~~~~~~l~v~a~D~~~~--~~~~~v~I~V~DvNdn~P~f~~~~~~~~v~E~~~~g~~~~i~~v~a~D~D~----~~~i~y 175 (215)
|+|.|+|++.+ ++++.|.|+|.|+|||+|.|.+..|.+.|.|++++| +.|++++|+|+|. |+.++|
T Consensus 76 ------l~v~a~D~g~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~g--t~v~~v~A~D~D~~~g~n~~i~Y 147 (218)
T 3k5r_A 76 ------LYVETTDASGKTLEGPVPLEVIVIDQNDNRPIFREGPYIGHVMEGSPTG--TTVMRMTAFDADDPATDNALLRY 147 (218)
T ss_dssp ------EEEEEECSSSCEEEEEEEEEEEEECTTCCCCCCCSCSEEEEEETTCCTT--CEEEECCCSCSSSSCGGGGCEEE
T ss_pred ------EEEEEEECCCCceeeeEEEEEEEEeCCCCCCcccCCceEEEEECCCCCC--CEEEEEEEEeCCCCCCCCcEEEE
Confidence 78999998876 588999999999999999999999999999999988 9999999999997 789999
Q ss_pred EEeeCCCC----CcEEEcC-CeeEEEc---ccCCCC---ccEEEEEEEEEC
Q psy9046 176 KILSGNDD----DVFAVDD-TGILTIQ---GPLAKG---KTVYNLLVQVSD 215 (215)
Q Consensus 176 ~i~~~~~~----~~F~Id~-~G~i~~~---~~ld~~---~~~y~l~V~a~D 215 (215)
+|.+++.. ++|.||+ +|.|++. ++||+| ...|.|.|+|+|
T Consensus 148 ~i~~~~~~~~~~~~F~Id~~tG~i~~~~~~~~LD~E~~~~~~y~l~V~a~D 198 (218)
T 3k5r_A 148 NIRQQTPDKPSPNMFYIDPEKGDIVTVVSPALLDRETLENPKYELIIEAQD 198 (218)
T ss_dssp EEEEEESCCSCSCSEEECTTTCEEEECSCGGGCCGGGCSCSEEEEEEEEEE
T ss_pred EEecCCCCCCcCCEEEEECCccEEEEeccCCCCCccccCCCeEEEEEEEEE
Confidence 99986543 6899999 9999987 699964 459999999997
No 18
>3qrb_A Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus musculus} PDB: 1ff5_A 3lng_A 2qvf_B 1edh_A 3lne_A 1q1p_A 3lni_A 3q2l_A* 3q2n_A* 3lnh_A 3lnf_A 2o72_A 1suh_A
Probab=100.00 E-value=5.6e-34 Score=222.20 Aligned_cols=168 Identities=23% Similarity=0.390 Sum_probs=147.2
Q ss_pred eEEEEecCCC--CCcEEEEEEEEeCCC-CceeEEEecC------CCcEEEeCCccceEEEEEEEecCCCcceeeEEEEec
Q psy9046 29 YLLEIEEEQP--IGSLLGKFTALDKDS-SIALYVLEQD------GDMFSVNNITVCEFQLSVDLAAADNFQSEYNATIKE 99 (215)
Q Consensus 29 ~~~~V~E~~~--~g~~v~~v~a~D~D~-~~~~y~i~~~------~~~F~id~~tg~~~~~~~~~~ld~e~~~~~~~~~~e 99 (215)
..++|+||.+ .|+.|+++.| |+|. +...|+|.++ .++|.|++.+|.+.+.+ +||||....|.
T Consensus 5 ~~~~V~En~~~~~~~~v~~v~a-D~d~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~---~LDrE~~~~y~----- 75 (213)
T 3qrb_A 5 AAISCPENEKGEFPKNLVQIKS-NRDKETKVFYSITGQGADKPPVGVFIIERETGWLKVTQ---PLDREAIAKYI----- 75 (213)
T ss_dssp EEEEEETTCCSSSSEEEEECCC-GGGGTSCEEEEEESBTTTBSSTTSEEECTTTCEEEECS---CCCTTTCSEEE-----
T ss_pred CCEEEeCCCCCCCCcEEEEEEE-CCCCCceEEEEEEcCCCCCCCCCeEEEECCCCEEEECC---ccCcccCceEE-----
Confidence 3789999998 6788999999 8876 3458999652 24899999999865544 79999999998
Q ss_pred CCCCCeEEEEEEEEeCCCC--ceEEEEEEEEeeCCCCCCccCCCceEEEEecCCCCCCCCEEEEEEEEeCCC-----CCe
Q psy9046 100 NSPGDTKVVLVSAEDASTP--CSHFRVNIKVLDVNDNRPEFKSKTYRTSIQENIIITPSPTLLTLEATDSDE-----NPH 172 (215)
Q Consensus 100 ~~~~~~~~l~v~a~D~~~~--~~~~~v~I~V~DvNdn~P~f~~~~~~~~v~E~~~~g~~~~i~~v~a~D~D~-----~~~ 172 (215)
|.|.|+|.+.+ ++++.|.|+|.|+|||+|.|.+..|.+.|.|++++| +.|++++|+|+|. |+.
T Consensus 76 --------l~v~a~D~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~g--t~v~~v~A~D~D~~~~~~n~~ 145 (213)
T 3qrb_A 76 --------LYSHAVSSNGEAVEDPMEIVITVTDQNDNRPEFTQEVFEGSVAEGAVPG--TSVMKVSATDADDDVNTYNAA 145 (213)
T ss_dssp --------EEEEEEETTSCBCSCCEEEEEEEECCSCCCCEESCSEEEEEEETTCCTT--CEEEECCEECCSCTTTSSTTC
T ss_pred --------EEEEEEeCCCCcccceEEEEEEEEEccCCCCccCCCceEEEEECCCCCC--cEEEEEEEEeCCCCCCCcCcE
Confidence 78999998875 678999999999999999999999999999999988 9999999999996 579
Q ss_pred EEEEEeeCC----CCCcEEEcC-CeeEEEc-ccCCCC-ccEEEEEEEEEC
Q psy9046 173 LTYKILSGN----DDDVFAVDD-TGILTIQ-GPLAKG-KTVYNLLVQVSD 215 (215)
Q Consensus 173 i~y~i~~~~----~~~~F~Id~-~G~i~~~-~~ld~~-~~~y~l~V~a~D 215 (215)
++|+|.+++ ..+.|.|++ +|.|++. ++||+| ...|.|.|+|+|
T Consensus 146 i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~~LD~E~~~~y~l~V~A~D 195 (213)
T 3qrb_A 146 IAYTIVSQDPELPHKNMFTVNRDTGVISVLTSGLDRESYPTYTLVVQAAD 195 (213)
T ss_dssp CEEEEEEEESCCSCSCSEEECTTTCEEEECSSCCCTTTCCEEEEEEEEET
T ss_pred EEEEEccCCCCCCcCCeEEEECCCcEEEEccCCCCCccCceEEEEEEEEe
Confidence 999998764 457899999 9999997 899965 789999999998
No 19
>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A*
Probab=100.00 E-value=6.9e-35 Score=267.34 Aligned_cols=188 Identities=27% Similarity=0.421 Sum_probs=165.6
Q ss_pred CeEEEEEEEecCCCCCccCCCCCCCCCceEEEEecCCCCCcEEEEEEEEeCC--CCc---eeEEEec-CCCcEEEe--C-
Q psy9046 1 MGTLIISIIDVNDIPPEFEPPWTRDEPNYLLEIEEEQPIGSLLGKFTALDKD--SSI---ALYVLEQ-DGDMFSVN--N- 71 (215)
Q Consensus 1 t~~v~I~V~DvND~~P~f~~~~~~~~~~~~~~V~E~~~~g~~v~~v~a~D~D--~~~---~~y~i~~-~~~~F~id--~- 71 (215)
+++|+|+|.|+|||+|+| ....|.++|+|+ ++|+.|+++.|+|+| .+. ..|+|.. +.++|.|+ +
T Consensus 359 ~~~v~I~V~DvNDn~P~F------~~~~y~~~V~En-~~gt~V~~v~A~D~D~~~g~n~~v~Ysi~~~~~~~F~I~~d~~ 431 (880)
T 1q55_A 359 EGKAIIQITDANDNAPIF------DPKTYTALVPEN-EIGFEVQRLSVTDLDMPGTPAWQAVYKIRVNEGGFFNITTDPE 431 (880)
T ss_dssp ECCEEEEEECCCCCCCCB------SCSEEEEEEESS-SCCCEEEEECBCCCSCTTSTTSCEECCBSCCTTSCEEEEECTT
T ss_pred eeEEEEEEEeccCCCCCc------cccceEEEeecC-CCCcEEEEEEEECCCCCCCCCceEEEEEecCCCceEEEEecCC
Confidence 468999999999999999 588899999999 999999999999999 433 4799975 55799995 3
Q ss_pred -CccceEEEEEEEecCCCcceeeEEEEecCCCCCeEEEEEEEEeCCC-----CceEEEEEEEEeeCCCCCCccCCCceEE
Q psy9046 72 -ITVCEFQLSVDLAAADNFQSEYNATIKENSPGDTKVVLVSAEDAST-----PCSHFRVNIKVLDVNDNRPEFKSKTYRT 145 (215)
Q Consensus 72 -~tg~~~~~~~~~~ld~e~~~~~~~~~~e~~~~~~~~l~v~a~D~~~-----~~~~~~v~I~V~DvNdn~P~f~~~~~~~ 145 (215)
.+|.+.+.+ +||||....|. |+|+|+|++. .+++++|+|+|.|+|| +|+|.+..|.+
T Consensus 432 ~~~G~i~~~~---~LD~E~~~~y~-------------l~V~A~D~~~~~~~~~sst~tV~I~V~DvND-~P~f~~~~y~~ 494 (880)
T 1q55_A 432 SNQGILTTAK---GLDFELRKQYV-------------LQITVENAEPFSVPLPTSTATVTVTVEDVNE-APFFVPAVSRV 494 (880)
T ss_dssp TCCEEEEESS---CCCCSSCCCEE-------------EEECCEESSCCSSCCCCCCEEEEEEEECCCC-CCEESSCEECC
T ss_pred CceEEEeccc---CCCcccCCcEE-------------EEEEEEECCCCCCCCcceeEEEEEEEEeCCC-CCEEecCceEE
Confidence 467644433 79999999998 7899999863 3789999999999999 99999999999
Q ss_pred EEecCCCCCCCCEEEEEEEEeCCC--CCeEEEEEeeCCCCCcEEEcC-CeeEEEcccCCCCc-----cEEEEEEEEEC
Q psy9046 146 SIQENIIITPSPTLLTLEATDSDE--NPHLTYKILSGNDDDVFAVDD-TGILTIQGPLAKGK-----TVYNLLVQVSD 215 (215)
Q Consensus 146 ~v~E~~~~g~~~~i~~v~a~D~D~--~~~i~y~i~~~~~~~~F~Id~-~G~i~~~~~ld~~~-----~~y~l~V~a~D 215 (215)
.|.|++++| +.|++++|+|+|. |+.++|+|.++ ..++|.|++ +|.|++.++||+|. ..|+|+|.|+|
T Consensus 495 ~V~En~~~G--t~V~~v~A~D~D~g~n~~v~Ysi~~~-~~~~F~Id~~tG~I~~~~~LDrE~~~~~~~~y~l~V~A~D 569 (880)
T 1q55_A 495 DVSEDLSRG--EKIISLVAQDPDKQQIQKLSYFIGND-PARWLTVNKDNGIVTGNGNLDRESEYVKNNTYTVIMLVTD 569 (880)
T ss_dssp CBCTTCCSS--EEEEECCEECCCTTCCCCEEEEECCC-SSCCCEEETTTTEEEECSCCCTTSSSCCSSCCEEEEEEEE
T ss_pred EEeCCCCCC--CEEEEEEEEeCCCCCCCcEEEEECCC-CCCCEEEeCCccEEEECCccCcccccCCCCEEEEEEEEEE
Confidence 999999987 9999999999998 88999999864 568999999 99999999999763 79999999987
No 20
>3lnd_A CDH6 protein, cadherin 6; cell adhesion, cell membrane, membrane, transmembr; 2.82A {Mus musculus}
Probab=100.00 E-value=1.1e-33 Score=219.51 Aligned_cols=165 Identities=26% Similarity=0.390 Sum_probs=140.0
Q ss_pred EEEEecCCCCC--cEEEEEEEEeCCCCc--eeEEEecCC--CcEEEeCCccceEEEEEEEecCCCcceeeEEEEecCCCC
Q psy9046 30 LLEIEEEQPIG--SLLGKFTALDKDSSI--ALYVLEQDG--DMFSVNNITVCEFQLSVDLAAADNFQSEYNATIKENSPG 103 (215)
Q Consensus 30 ~~~V~E~~~~g--~~v~~v~a~D~D~~~--~~y~i~~~~--~~F~id~~tg~~~~~~~~~~ld~e~~~~~~~~~~e~~~~ 103 (215)
.++|+||.+.+ +.|+++ |+|+|.|. ..|+|..++ ++|.|++.+|.+.+.+ +||||....|.
T Consensus 6 ~~~v~En~~~~~~~~v~~~-a~D~D~g~~~i~Y~l~~~~~~~~F~Id~~tG~i~~~~---~LDrE~~~~y~--------- 72 (207)
T 3lnd_A 6 QFFLLEEYTGSDYQYVGKL-HSDQDRGDGSLKYILSGDGAGDLFIINENTGDIQATK---RLDREEKPVYI--------- 72 (207)
T ss_dssp CEEEESCBCSSSCEEEEEC-CCTTCCSSTTBCCCCCSSSBTTTEEECTTTCEEEECS---CCCGGGCCEEE---------
T ss_pred ccEEEeecCCCCCEEEEEE-EeCCCCCCceEEEEEECCCCCCeEEEECCceEEEECC---CcCcccCCEEE---------
Confidence 56899998855 588888 99999863 469986543 5899999999866544 79999999998
Q ss_pred CeEEEEEEEEeCCC---CceEEEEEEEEeeCCCCCCccCCCceEEEEecCCCCCCCCEEEEEEEEeCCC-----CCeEEE
Q psy9046 104 DTKVVLVSAEDAST---PCSHFRVNIKVLDVNDNRPEFKSKTYRTSIQENIIITPSPTLLTLEATDSDE-----NPHLTY 175 (215)
Q Consensus 104 ~~~~l~v~a~D~~~---~~~~~~v~I~V~DvNdn~P~f~~~~~~~~v~E~~~~g~~~~i~~v~a~D~D~-----~~~i~y 175 (215)
|+|.|+|++. .++++.|.|+|.|+|||+|.|.+..|.+.|.|++++| +.|++++|+|+|. |+.++|
T Consensus 73 ----l~v~a~D~~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~g--t~v~~v~A~D~D~~~~g~n~~i~Y 146 (207)
T 3lnd_A 73 ----LRAQAVNRRTGRPVEPESEFIIKIHDINDNEPIFTKDVYTATVPEMADVG--TFVVQVTATDADDPTYGNSAKVVY 146 (207)
T ss_dssp ----C----CBSSSCCCCSCCCCCEEEEECCSCCCCEESCSEEEEEEESSCCTT--CEEEECCEECSSCTTSSSTTCCEE
T ss_pred ----EEEEEEECCCCCccccEEEEEEEECccCCCCCccCCCceEEEEeCCCCCC--CEEEEEEEEeCCCCCCCCCcEEEE
Confidence 7899999863 2778899999999999999999999999999999988 9999999999994 679999
Q ss_pred EEeeCCCCCcEEEcC-CeeEEEc-ccCCCC-ccEEEEEEEEEC
Q psy9046 176 KILSGNDDDVFAVDD-TGILTIQ-GPLAKG-KTVYNLLVQVSD 215 (215)
Q Consensus 176 ~i~~~~~~~~F~Id~-~G~i~~~-~~ld~~-~~~y~l~V~a~D 215 (215)
+|.+++ ..|.|++ +|.|++. ++||+| ...|.|.|+|+|
T Consensus 147 ~i~~~~--~~F~Id~~tG~i~~~~~~lD~E~~~~y~l~V~A~D 187 (207)
T 3lnd_A 147 SILQGQ--PYFSVESETGIIKTALLNMDRENREQYQVVIQAKD 187 (207)
T ss_dssp EEEESG--GGEEECTTTCEEEECCSSCCC--CCEEEEEEEEES
T ss_pred EEcCCC--CCEEEcCCCcEEEECcccCCcccCCEEEEEEEEEE
Confidence 999864 4899999 9999999 999965 789999999998
No 21
>4apx_B Protocadherin-15, otocadherin; cell adhesion, hearing, deafness, CDH23, PCDH15; HET: MES; 1.65A {Mus musculus} PDB: 4aq8_C 4aqa_B* 4aqe_B* 4axw_B*
Probab=99.97 E-value=1.1e-30 Score=206.77 Aligned_cols=178 Identities=25% Similarity=0.327 Sum_probs=143.9
Q ss_pred CCceEEEEecCCCCCcEEEEEEEEe-CCCCc---eeEEEecC-CCcEEEeCCccceEEEEEEEecCCCcceeeEEEEecC
Q psy9046 26 EPNYLLEIEEEQPIGSLLGKFTALD-KDSSI---ALYVLEQD-GDMFSVNNITVCEFQLSVDLAAADNFQSEYNATIKEN 100 (215)
Q Consensus 26 ~~~~~~~V~E~~~~g~~v~~v~a~D-~D~~~---~~y~i~~~-~~~F~id~~tg~~~~~~~~~~ld~e~~~~~~~~~~e~ 100 (215)
.+.+.+.|+|++++|+.|+.+.+.| .|.+. ..|+|.+. ..+|.|++.+|.++.......||||....|.+.
T Consensus 19 PP~~~vsV~E~sp~GTvv~~~~~~~~~d~~~n~~i~ysl~~~~~~~f~id~~tg~~~l~~t~~~LDrE~~~~~~~~---- 94 (242)
T 4apx_B 19 PPATIVAIDEESRNGTILVDNMLIKGTAGGPDPTIELSLKDNVDYWVLLDPVKQMLFLNSTGRVLDRDPPMNIHSI---- 94 (242)
T ss_dssp CSSEEEEEETTCCTTCEEESCCCBSSCBSSSSCSEEEEEESCGGGCEEEETTTTEEEECCTTSCCCCSTTTCCCEE----
T ss_pred CCeEEEEeeCCCCCCCEEEEEEEecCCCCCCCCEEEEEEecCCCceEEECCCCCEEEEEecCCceeccCCCceEEE----
Confidence 3568899999999999987655544 44443 46998654 468999999997544322236999988888642
Q ss_pred CCCCeEEEEEEEEeCCCC-ceEEEEEEEEeeCCCCCCccCCCceEEEEecCCCCCCCCEEEE-----EEEEeCCC--CCe
Q psy9046 101 SPGDTKVVLVSAEDASTP-CSHFRVNIKVLDVNDNRPEFKSKTYRTSIQENIIITPSPTLLT-----LEATDSDE--NPH 172 (215)
Q Consensus 101 ~~~~~~~l~v~a~D~~~~-~~~~~v~I~V~DvNdn~P~f~~~~~~~~v~E~~~~g~~~~i~~-----v~a~D~D~--~~~ 172 (215)
.+.+.|.+...+ ...+.|+|.|.|+|||+|+|.+..|.+.|.|++++| +.|++ ++|+|+|. |+.
T Consensus 95 ------~~~v~~~~~~~~~~~~~~V~I~V~DvNDn~P~F~~~~y~~~v~En~~~G--t~v~~~~~~~v~A~D~D~g~N~~ 166 (242)
T 4apx_B 95 ------VVQVQCVNKKVGTVIYHEVRIVVRDRNDNSPTFKHESYYATVNELTPVG--TTIFTGFSGDNGATDIDDGPNGQ 166 (242)
T ss_dssp ------EEEEEEEETTTCCEEEEEEEEEEECCCCCCCEESSSCEEEEEETTCCTT--CEEECTTTTTTSEECCSSGGGGC
T ss_pred ------EEEEEeECCCCCeEEEEEEEEEEEeCCCCCCcccceeeeeEeeeccCCC--CEEEEeeecccccccCCCCcCCc
Confidence 256777776543 567789999999999999999999999999999988 99976 78999998 899
Q ss_pred EEEEEeeCCCC----CcEEEc-C-CeeEEEcccCCCC-ccEEEEEEEEEC
Q psy9046 173 LTYKILSGNDD----DVFAVD-D-TGILTIQGPLAKG-KTVYNLLVQVSD 215 (215)
Q Consensus 173 i~y~i~~~~~~----~~F~Id-~-~G~i~~~~~ld~~-~~~y~l~V~a~D 215 (215)
|+|+|..++.. +.|.|+ + +|.|++.++||+| ...|.|.|+|+|
T Consensus 167 v~Ysi~~~~~~~~~~~~F~Id~~~tG~i~~~~~LD~E~~~~y~l~V~A~D 216 (242)
T 4apx_B 167 IEYVIQYNPEDPTSNDTFEIPLMLTGNVVLRKRLNYEDKTRYYVIIQAND 216 (242)
T ss_dssp EEEEEECCTTSTTHHHHEECSSTTTCCEEECSCCCTTTCCEEEEEEEEEE
T ss_pred eEEEEecCCCCcccccceEEcCCCceEEEECCcCChhhCCEEEEEEEEEE
Confidence 99999987543 359998 4 8999999999965 789999999997
No 22
>2a62_A Cadherin-8; extracellular domain, homodimer, calcium binding, adhesion; 4.50A {Mus musculus}
Probab=99.97 E-value=6.9e-31 Score=216.38 Aligned_cols=166 Identities=30% Similarity=0.463 Sum_probs=145.8
Q ss_pred eEEEEecC--CCCCcEEEEEEEEeCCCC--ceeEEEecC--CCcEEEeCCccceEEEEEEEecCCCcceeeEEEEecCCC
Q psy9046 29 YLLEIEEE--QPIGSLLGKFTALDKDSS--IALYVLEQD--GDMFSVNNITVCEFQLSVDLAAADNFQSEYNATIKENSP 102 (215)
Q Consensus 29 ~~~~V~E~--~~~g~~v~~v~a~D~D~~--~~~y~i~~~--~~~F~id~~tg~~~~~~~~~~ld~e~~~~~~~~~~e~~~ 102 (215)
+.+.|.|+ .+.|+.|+++. +|+|.+ ...|+|..+ ..+|.|++.+|.+.+.+ .||||....|.
T Consensus 5 ~~~~v~E~~~~~~~~~v~~va-~D~D~g~~~i~Y~l~~~~~~~~F~Id~~tG~i~~~~---~LDrE~~~~y~-------- 72 (322)
T 2a62_A 5 NQMFVLEEFSGPEPILVGRLH-TDLDPGSKKIKYILSGDGAGTIFQINDITGDIHAIK---RLDREEKAEYT-------- 72 (322)
T ss_dssp CCEECCCSCCCSSCEECCCCC-CCCCCSSCCCEEEEEETTBTTTEEEETTTTEEEECS---CCCTTTCSBCC--------
T ss_pred ceeeeccccCCCCCEEEEEEE-EcCCCCCCEEEEEEECCCCCCcEEEeCCcCEEEEec---cCCcccccEEE--------
Confidence 46789999 88999999995 899975 447999754 36899999999866544 79999999998
Q ss_pred CCeEEEEEEEEeCCCC---ceEEEEEEEEeeCCCCCCccCCCceEEEEecCCCCCCCCEEEEEEEEeCCC-----CCeEE
Q psy9046 103 GDTKVVLVSAEDASTP---CSHFRVNIKVLDVNDNRPEFKSKTYRTSIQENIIITPSPTLLTLEATDSDE-----NPHLT 174 (215)
Q Consensus 103 ~~~~~l~v~a~D~~~~---~~~~~v~I~V~DvNdn~P~f~~~~~~~~v~E~~~~g~~~~i~~v~a~D~D~-----~~~i~ 174 (215)
|+|.|+|++.+ ++.+++.|+|.|+|||+|.|.+..|.+.|.|++++| +.|++++|+|+|. |+.++
T Consensus 73 -----l~v~a~D~~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~g--t~v~~v~A~D~D~~~~G~n~~i~ 145 (322)
T 2a62_A 73 -----LTAQAVDFETNKPLEPPSEFIIKVQDINDNAPEFLNGPYHATVPEMSILG--TSVTNVTATDADDPVYGNSAKLV 145 (322)
T ss_dssp -----EEEEEECTTTCSEEEEEEEECEECCCCSCSCBCCSSSEEEEEECSSCCTT--CBCCCCCCCBCSCSSSTTSSCEE
T ss_pred -----EEEEEEECCCCCcccceEEEEEEEEecCCCCCccCCCceEEEEeCCCCCC--CEEEEEEEEeCCCCCCCccEEEE
Confidence 78999998652 677899999999999999999999999999999988 9999999999994 67999
Q ss_pred EEEeeCCCCCcEEEcC-CeeEEEc-ccCCCC-ccEEEEEEEEEC
Q psy9046 175 YKILSGNDDDVFAVDD-TGILTIQ-GPLAKG-KTVYNLLVQVSD 215 (215)
Q Consensus 175 y~i~~~~~~~~F~Id~-~G~i~~~-~~ld~~-~~~y~l~V~a~D 215 (215)
|+|.+++ ..|.|++ +|.|++. ++||+| ...|.|.|+|+|
T Consensus 146 Y~i~~~~--~~F~Id~~tG~i~~~~~~LD~E~~~~y~l~V~a~D 187 (322)
T 2a62_A 146 YSILEGQ--PYFSIEPETAIIKTALPNMDREAKEEYLVVIQAKD 187 (322)
T ss_dssp EEEEECT--TTEEECTTTCCEEECSSCCCGGGCSEEEEEEEEEE
T ss_pred EEEccCC--CCEEEecCCCEEEecccCCCcccCCeEEEEEEEEE
Confidence 9999864 6899999 9999998 899965 789999999987
No 23
>3ubf_A Neural-cadherin; cell adhesion; 2.50A {Drosophila melanogaster} PDB: 3ubg_A
Probab=99.97 E-value=1.9e-29 Score=207.48 Aligned_cols=166 Identities=19% Similarity=0.248 Sum_probs=139.8
Q ss_pred ceEEEEecCCCCCcEEEEEEEEeCCCCceeEEEecCCCcEEEeCCccceEEEEEEEecCCCcc-----eeeEEEEecCCC
Q psy9046 28 NYLLEIEEEQPIGSLLGKFTALDKDSSIALYVLEQDGDMFSVNNITVCEFQLSVDLAAADNFQ-----SEYNATIKENSP 102 (215)
Q Consensus 28 ~~~~~V~E~~~~g~~v~~v~a~D~D~~~~~y~i~~~~~~F~id~~tg~~~~~~~~~~ld~e~~-----~~~~~~~~e~~~ 102 (215)
.+.++.+|+.+.|+.++++.+.|+ ...|+|..++.+|.|++ +|.+.+.+ +||||.. ..|.
T Consensus 8 ~~~atd~D~g~ng~v~y~l~~~~~---~~~f~i~~~~~~F~i~~-tG~l~~~~---~LD~E~~~~~~~~~~~-------- 72 (316)
T 3ubf_A 8 RIEFTEADGDTEGKSVFQLEKETD---KETFKIRDDNPWVTVET-NGAVRVKK---KWDYEELGPEKTIDFW-------- 72 (316)
T ss_dssp EEEEESGGGCSTTCEEEECCCSST---TCEEEESSCCSSEEECT-TSEEEESS---CCCGGGSCTTCEEEEE--------
T ss_pred EEEEEecCCCCCceEEEEEEcCCC---cceEEEeCCCCeEEECC-CeEEEECC---ccChhhcccccceEEE--------
Confidence 578888999999999999877543 45799998889999999 99865554 7999973 3444
Q ss_pred CCeEEEEEEEEeCCCC---ceEEEEEEEEeeCCCCCCccCCCc--eEEEEecCCCCCCCCEEEEEEEEeCCCCCeEEEEE
Q psy9046 103 GDTKVVLVSAEDASTP---CSHFRVNIKVLDVNDNRPEFKSKT--YRTSIQENIIITPSPTLLTLEATDSDENPHLTYKI 177 (215)
Q Consensus 103 ~~~~~l~v~a~D~~~~---~~~~~v~I~V~DvNdn~P~f~~~~--~~~~v~E~~~~g~~~~i~~v~a~D~D~~~~i~y~i 177 (215)
|.|+|.|++.+ +++++|+|+|.|+|||+|.|.+.. |.+.|.|++++| +.|++++|+|+|.+..++|+|
T Consensus 73 -----l~v~a~d~~~~~~~s~~~~v~I~V~DvNDn~P~F~~~~~~y~~~v~En~~~g--t~v~~v~A~D~D~g~ni~Y~i 145 (316)
T 3ubf_A 73 -----VIITNMGHNAGIKYTDNQRVIILVKDVNDEPPYFINRPLPMQAVVQLNAPPN--TPVFTLQARDPDTDHNIHYFI 145 (316)
T ss_dssp -----EEEEC-------CCCEEEEEEEEEECTTCCCCEECCSSSSEEEEECTTCCTT--CEEEECCEECSSTTCCEEEEE
T ss_pred -----EEEEEcCCCCCCcccceEEEEEEEEECCCCCCccCCCCCCEEEEEeCCCCCC--CEEEEEEEECCCCCCceEEEE
Confidence 78999998854 789999999999999999999886 899999999988 999999999999844599999
Q ss_pred eeCCCCCcEEEcC-CeeEEEcccCCCC-ccEEEEEEEEEC
Q psy9046 178 LSGNDDDVFAVDD-TGILTIQGPLAKG-KTVYNLLVQVSD 215 (215)
Q Consensus 178 ~~~~~~~~F~Id~-~G~i~~~~~ld~~-~~~y~l~V~a~D 215 (215)
..++..++|.|++ +|.|++.++||++ ...|.|+|+|+|
T Consensus 146 ~~~~~~~~F~Id~~tG~i~~~~~lD~e~~~~y~l~V~A~D 185 (316)
T 3ubf_A 146 VRDRTGGRFEVDERSGVVRTRGTDLFQLDMEYVLYVKAED 185 (316)
T ss_dssp EEEESSSCEEECTTTCEEEECSSCCCCTTCEEEEEEEEEE
T ss_pred EeCCCCCEEEEECCccEEEECCcCCcccCcEEEEEEEEEe
Confidence 9877788999999 9999999999965 789999999987
No 24
>2yst_A Protocadherin-7; BH-PCDH, beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.95 E-value=1.5e-28 Score=174.51 Aligned_cols=109 Identities=22% Similarity=0.282 Sum_probs=97.3
Q ss_pred EEEEecCCCCCccCCCCCCCCCceEEEEecCCCCCcEEEEEEEEeCCCCce---eEEEecCC----CcEEEeCCccceEE
Q psy9046 6 ISIIDVNDIPPEFEPPWTRDEPNYLLEIEEEQPIGSLLGKFTALDKDSSIA---LYVLEQDG----DMFSVNNITVCEFQ 78 (215)
Q Consensus 6 I~V~DvND~~P~f~~~~~~~~~~~~~~V~E~~~~g~~v~~v~a~D~D~~~~---~y~i~~~~----~~F~id~~tg~~~~ 78 (215)
++|.|+|||+|.| .+..|.++|+|+.++|+.|+++.|+|+|.|.+ +|+|..+. .+|.|++.+|.+.+
T Consensus 2 ~~V~DvNDn~P~F------~~~~y~~~v~En~~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~~~F~Id~~tG~I~~ 75 (119)
T 2yst_A 2 SSGSSGNDNSPRF------EKSVYEADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRLLRLDETSGWLSV 75 (119)
T ss_dssp CCCCCSCCCCCCC------SSSEEEEEEETTCCTTCEEEECCCCCSSSSCCSCCCCEECSCCTTHHHHEEECTTTCEEEE
T ss_pred CeEecCCCCCCCc------CCCcEEEEEECCCCCCCEEEEEEEEeCCCCCCCeEEEEEecCCCccccEEEEeCCceEEEE
Confidence 4689999999999 58899999999999999999999999998654 69997654 58999999998654
Q ss_pred EEEEEecCCCcceeeEEEEecCCCCCeEEEEEEEEeCCCC--ceEEEEEEEEeeCCCCCC
Q psy9046 79 LSVDLAAADNFQSEYNATIKENSPGDTKVVLVSAEDASTP--CSHFRVNIKVLDVNDNRP 136 (215)
Q Consensus 79 ~~~~~~ld~e~~~~~~~~~~e~~~~~~~~l~v~a~D~~~~--~~~~~v~I~V~DvNdn~P 136 (215)
.+ .||||....|. |.|+|+|+|.+ +++++|+|+|.|+|||+|
T Consensus 76 ~~---~LD~E~~~~y~-------------l~V~A~D~g~p~~s~~~~v~I~V~DvNDn~P 119 (119)
T 2yst_A 76 LH---RIDREEVNQLR-------------FTVMARDRGQPPKTDKATVVLNIKDENDNVP 119 (119)
T ss_dssp CS---CCCTTTCSEEE-------------EEEEECCSBTTBCCEEEEEEEEEECSTTCCC
T ss_pred Cc---cCCcccCCEEE-------------EEEEEEECCCCCcEEEEEEEEEEEeccCCCC
Confidence 43 79999999998 79999999876 689999999999999998
No 25
>2a4e_A Cadherin-11; dimer, calcium binding, cell adhesion; 3.20A {Mus musculus}
Probab=99.94 E-value=1.1e-26 Score=181.02 Aligned_cols=116 Identities=24% Similarity=0.329 Sum_probs=96.7
Q ss_pred CeEEEEEEEecCCCCCccCCCCCCCCCceEEEEecCCCCCcEEEEEEEEeCCC---Cc---eeEEEecCCCcEEEeCCcc
Q psy9046 1 MGTLIISIIDVNDIPPEFEPPWTRDEPNYLLEIEEEQPIGSLLGKFTALDKDS---SI---ALYVLEQDGDMFSVNNITV 74 (215)
Q Consensus 1 t~~v~I~V~DvND~~P~f~~~~~~~~~~~~~~V~E~~~~g~~v~~v~a~D~D~---~~---~~y~i~~~~~~F~id~~tg 74 (215)
+++|+|.|.|+|||+|.| .+..|.++|+|+.++|+.|+++.|+|+|. |. ..|+|..++.+|.|++.+|
T Consensus 90 ~~~v~I~V~DvNDn~P~F------~~~~y~~~v~E~~~~Gt~v~~v~A~D~D~~~~G~n~~i~Y~i~~~~~~F~Id~~tG 163 (215)
T 2a4e_A 90 PSEFIVKVQDINDNPPEF------LHEIYHANVPERSNVGTSVIQVTASDADDPTYGNSAKLVYSILEGQPYFSVEAQTG 163 (215)
T ss_dssp EEEEEEEEECCCCCCCEE------SSSSEEEEEETTCCTTCEEEECCEECSSCTTTCSSSCCEEEEEESTTTEEECTTTC
T ss_pred cEEEEEEEeeCCCCCCCc------cCCceEEEEECCCCCCCEEEEEEEEECCCCCCCCceEEEEEEeCCCCcEEEeCCcc
Confidence 368999999999999999 58899999999999999999999999996 44 4699998889999999999
Q ss_pred ceEEEEEEEecCCCcceeeEEEEecCCCCCeEEEEEEEEeCCCC----ceEEEEEEEEeeCCCCCCc
Q psy9046 75 CEFQLSVDLAAADNFQSEYNATIKENSPGDTKVVLVSAEDASTP----CSHFRVNIKVLDVNDNRPE 137 (215)
Q Consensus 75 ~~~~~~~~~~ld~e~~~~~~~~~~e~~~~~~~~l~v~a~D~~~~----~~~~~v~I~V~DvNdn~P~ 137 (215)
.+.+... .||||....|. |.|+|+|+|.+ +++++|+|+|.|+|||+|+
T Consensus 164 ~I~~~~~--~LD~E~~~~y~-------------l~V~A~D~g~~~~~~s~~~~v~I~V~DvNDn~P~ 215 (215)
T 2a4e_A 164 IIRTALP--NMDREAKEEYH-------------VVIQAKDMGGHMGGLSGTTKVTITLTDDYKDDDK 215 (215)
T ss_dssp EEEECSS--CCCSSSCSEEE-------------EEEEEETTTTCTTCCEEEEEEEEEEEC-------
T ss_pred EEEEccc--CCCcccCCEEE-------------EEEEEEECCCCCCCceeEEEEEEEEEECCCCCCC
Confidence 8655412 79999999998 79999999853 7899999999999999995
No 26
>2x2u_A Proto-oncogene tyrosine-protein kinase receptor RET; hirschsprung disease, extracellular domain, disease mutation, transferase, glycoprotein; HET: NAG SO4; 2.00A {Homo sapiens}
Probab=99.94 E-value=1.8e-27 Score=189.09 Aligned_cols=117 Identities=19% Similarity=0.156 Sum_probs=102.8
Q ss_pred CeEEEEEEEecCCCCCc----------cCCCCCCCCCceEEEEecCCCCCcEEEEEEEEeCCCCce---eEEEecC-CCc
Q psy9046 1 MGTLIISIIDVNDIPPE----------FEPPWTRDEPNYLLEIEEEQPIGSLLGKFTALDKDSSIA---LYVLEQD-GDM 66 (215)
Q Consensus 1 t~~v~I~V~DvND~~P~----------f~~~~~~~~~~~~~~V~E~~~~g~~v~~v~a~D~D~~~~---~y~i~~~-~~~ 66 (215)
+++|+|.|.|+|||+|+ | .+..|.+.|+|+.++|+.|+++.|+|+|.|.+ +|+|..+ ..+
T Consensus 112 ~~~v~I~V~DvNDn~P~~~~~~~~~~~F------~~~~y~~~v~En~~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~ 185 (246)
T 2x2u_A 112 PGCARVYFSFFNTSFPACSSLKPRELCF------PETRPSFRIRENRPPGTFHQFRLLPVQFLCPQISVAYRLLEGEGLP 185 (246)
T ss_dssp TTEEEEEEEEESSCCCCGGGCCHHHHHS------CSSCCCEEEEBTSCCCEEEECSCHHHHHHCTTSCEEEEEESCTTSS
T ss_pred eEEEEEEEEECCCCCCcccccccccccc------CCCcEEEEEECCCCCCcEEEEEEEEcCCCCCCcEEEEEEccCCCCC
Confidence 47899999999999999 9 58899999999999999999999999998754 6999877 689
Q ss_pred EEEeCCccceEEEEEEEecCCCcceeeEEEEecCCCCCeEEEEEEEEe-CCCC--ceEEEEEEEEeeCCCCCCccC
Q psy9046 67 FSVNNITVCEFQLSVDLAAADNFQSEYNATIKENSPGDTKVVLVSAED-ASTP--CSHFRVNIKVLDVNDNRPEFK 139 (215)
Q Consensus 67 F~id~~tg~~~~~~~~~~ld~e~~~~~~~~~~e~~~~~~~~l~v~a~D-~~~~--~~~~~v~I~V~DvNdn~P~f~ 139 (215)
|.|++.+|.+.+.+ .||||....|. |+|.|+| .|.| +++++|.|+|.|+|||+|.|.
T Consensus 186 F~Id~~tG~i~~~~---~LDrE~~~~y~-------------l~V~A~d~dg~p~~ss~~~v~I~V~DvNDn~P~F~ 245 (246)
T 2x2u_A 186 FRSAPDSLEVSTRW---ALDREQREKYE-------------LVAVCTVHAGAREEVVMVPFPVTVYDEDDSAPEFE 245 (246)
T ss_dssp EECCTTCCEEEESS---CBCTTTCSEEE-------------EEEEEEEC---CCEEEEEEEEEEEECSSCCSCCCC
T ss_pred EEEECCcCEEEeCC---ccCccccceEE-------------EEEEEEecCCCCcceEEEEEEEEEEEeCCCCCccC
Confidence 99999999865544 79999999998 6899887 3434 889999999999999999996
No 27
>2ee0_A Protocadherin-9; Ca domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.93 E-value=1.3e-26 Score=163.15 Aligned_cols=105 Identities=28% Similarity=0.276 Sum_probs=93.8
Q ss_pred EEEEecCCCCCccCCCCCCCCCceEEEEecCCCCCcEEEEEEEEeCCCCce---eEEEec-----CCCcEEEeCCccceE
Q psy9046 6 ISIIDVNDIPPEFEPPWTRDEPNYLLEIEEEQPIGSLLGKFTALDKDSSIA---LYVLEQ-----DGDMFSVNNITVCEF 77 (215)
Q Consensus 6 I~V~DvND~~P~f~~~~~~~~~~~~~~V~E~~~~g~~v~~v~a~D~D~~~~---~y~i~~-----~~~~F~id~~tg~~~ 77 (215)
|+|.|+|||+|.| .+..|.++|+|+.++|+.|+++.|+|+|.|.+ +|+|.. ...+|.|++.+|.+.
T Consensus 2 ~~V~DvNDn~P~F------~~~~y~~~v~En~~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~~~~F~Id~~tG~I~ 75 (114)
T 2ee0_A 2 SSGSSGNDNRPVF------KEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLIT 75 (114)
T ss_dssp CCCCCCCCCCCCC------SCSEEEEEEETTCCTTCEEEECCCCSCSSCCCSCCEEEECSSCCHHHHHHEEECTTTCEEE
T ss_pred CeEeeCCCCCCCc------CCCcEEEEEECCCCCCCEEEEEEEEeCCCCCCcEEEEEEccCCCCCccceEEEeCCeeEEE
Confidence 5689999999999 58899999999999999999999999998654 699965 347999999999865
Q ss_pred EEEEEEecCCCcceeeEEEEecCCCCCeEEEEEEEEeCCCCceEEEEEEEEeeCC
Q psy9046 78 QLSVDLAAADNFQSEYNATIKENSPGDTKVVLVSAEDASTPCSHFRVNIKVLDVN 132 (215)
Q Consensus 78 ~~~~~~~ld~e~~~~~~~~~~e~~~~~~~~l~v~a~D~~~~~~~~~v~I~V~DvN 132 (215)
+.+ .||||....|. |.|+|+|++.++++++|+|+|+|+|
T Consensus 76 ~~~---~LD~E~~~~y~-------------l~V~A~D~g~~~~~~~v~I~V~DvN 114 (114)
T 2ee0_A 76 VQR---SLDREETAIHK-------------VTVLASDGSSTPARATVTINVTDVN 114 (114)
T ss_dssp ECS---CCCTTTCSEEE-------------EEEEEESSSSSCEEEEEEEEEECCC
T ss_pred ECc---cCCcccCcEEE-------------EEEEEEECCCCceEEEEEEEEEECC
Confidence 443 79999999998 7999999998889999999999998
No 28
>3mvs_A Cadherin-23, otocadherin; adhesion, extracellular domain, cell adhesion; 1.10A {Mus musculus} PDB: 4apx_A* 2whv_A 2wcp_A* 4aq8_A 4axw_A* 4aqe_A* 4aqa_A* 2wd0_A* 2wbx_A
Probab=99.93 E-value=2.6e-25 Score=172.71 Aligned_cols=113 Identities=22% Similarity=0.337 Sum_probs=101.6
Q ss_pred CeEEEEEEEecCCCCCccCCCCCCCCCceEEEEecCCCCCcEEEEEEEEeCCCCc---eeEEEecCCCcEEEeCCccceE
Q psy9046 1 MGTLIISIIDVNDIPPEFEPPWTRDEPNYLLEIEEEQPIGSLLGKFTALDKDSSI---ALYVLEQDGDMFSVNNITVCEF 77 (215)
Q Consensus 1 t~~v~I~V~DvND~~P~f~~~~~~~~~~~~~~V~E~~~~g~~v~~v~a~D~D~~~---~~y~i~~~~~~F~id~~tg~~~ 77 (215)
+++|+|.|.|+|||+|.| ....|.+.|+|+.++|+.|+++.|+|+|.|. ..|+|..++++|.|++.+|.+.
T Consensus 92 ~~~v~I~V~DvNDn~P~f------~~~~y~~~v~E~~~~gt~v~~v~A~D~D~g~n~~v~Y~i~~~~~~F~Id~~tG~i~ 165 (210)
T 3mvs_A 92 TRKVNIQVGDVNDNAPTF------HNQPYSVRIPENTPVGTPIFIVNATDPDLGAGGSVLYSFQPPSPFFAIDSARGIVT 165 (210)
T ss_dssp EEEEEEEEECCCCCCCEE------CSCSEEEEEETTCCTTCEEEECCEECCSSGGGGCEEEEESSCCSSEEECTTTCEEE
T ss_pred EEEEEEEEEeCCCCCCcC------CCceEEEEEECCCCCCCEEEEEEEEeCCCCCCceEEEEEeCCCCCEEEeCCcEEEE
Confidence 468999999999999999 5889999999999999999999999999865 4699998889999999999865
Q ss_pred EEEEEEecCCCcceeeEEEEecCCCCCeEEEEEEEEeCCC---CceEEEEEEEEeeCCCCC
Q psy9046 78 QLSVDLAAADNFQSEYNATIKENSPGDTKVVLVSAEDAST---PCSHFRVNIKVLDVNDNR 135 (215)
Q Consensus 78 ~~~~~~~ld~e~~~~~~~~~~e~~~~~~~~l~v~a~D~~~---~~~~~~v~I~V~DvNdn~ 135 (215)
+.+ +||||....|. |+|+|+|+++ .+++++++|+|.|+||||
T Consensus 166 ~~~---~LD~E~~~~y~-------------l~V~a~D~g~~~~~s~~~~v~I~V~DvND~~ 210 (210)
T 3mvs_A 166 VIQ---ELDYEVTQAYQ-------------LTVNATDQDKTRPLSTLANLAIIITDMQDMD 210 (210)
T ss_dssp ECS---CCCTTTCSEEE-------------EEEEEEECCSSSCCEEEEEEEEEEECCCCCC
T ss_pred ECC---cCCCcccceEE-------------EEEEEEECCCCCCCEEEEEEEEEEEccCCCC
Confidence 443 79999999998 7999999984 288999999999999975
No 29
>3ppe_A Vascular endothelial cadherin; extracellular cadherin (EC) domain, beta barrel, IG-domain L domain swapped dimer interface; 2.10A {Gallus gallus}
Probab=99.89 E-value=1.9e-22 Score=155.75 Aligned_cols=108 Identities=27% Similarity=0.369 Sum_probs=95.1
Q ss_pred CeEEEEEEEecCCCCCccCCCCCCCCCceEEEEecCCCCCcEEEEEEEEeCCC---C---ceeEEEecCCCcEEEeCCcc
Q psy9046 1 MGTLIISIIDVNDIPPEFEPPWTRDEPNYLLEIEEEQPIGSLLGKFTALDKDS---S---IALYVLEQDGDMFSVNNITV 74 (215)
Q Consensus 1 t~~v~I~V~DvND~~P~f~~~~~~~~~~~~~~V~E~~~~g~~v~~v~a~D~D~---~---~~~y~i~~~~~~F~id~~tg 74 (215)
+++|+|.|.|+|||+|.| ....|.++|+|+.++|+.|+++.|+|+|. | ...|+|..++.+|.|+ .+|
T Consensus 87 ~~~v~I~V~DvNDn~P~F------~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~~g~n~~i~Y~i~~~~~~F~I~-~tG 159 (203)
T 3ppe_A 87 PSKFIIKVSDINDNAPIF------VQKIFNGSVPEMSRLGTSVTKVTAEDADDPTVAGHATVTYQIIKGNEYFTVD-DSG 159 (203)
T ss_dssp CEEEEEEEECCCCCCCEE------SCSEEEEEEETTCCTTCEEEECCEECCSCTTSSSTTCEEEEEEESTTTEEEC-TTS
T ss_pred eEEEEEEEcCCCCCCCCc------cCCccEEEEeccCCCCcEEEEEEEEcCCCcCCCCceEEEEEEeCCCCcEEEe-CCe
Confidence 478999999999999999 58899999999999999999999999994 3 3479999988999999 899
Q ss_pred ceEEEEEEEecCCCcceeeEEEEecCCCCCeEEEEEEEEeC-CCC--ceEEEEEEEEee
Q psy9046 75 CEFQLSVDLAAADNFQSEYNATIKENSPGDTKVVLVSAEDA-STP--CSHFRVNIKVLD 130 (215)
Q Consensus 75 ~~~~~~~~~~ld~e~~~~~~~~~~e~~~~~~~~l~v~a~D~-~~~--~~~~~v~I~V~D 130 (215)
.+.+... .||||....|. |.|.|+|+ |.| +++++|+|+|.|
T Consensus 160 ~i~~~~~--~LD~E~~~~y~-------------l~V~A~D~~G~p~~s~t~~v~I~V~D 203 (203)
T 3ppe_A 160 VIFTARA--DLDRESQSAYE-------------IIVKAKDALGLTGESSTATVIIRLTD 203 (203)
T ss_dssp EEEESCS--CCCTTTCSEEE-------------EEEEEEETTCCCCSSSEEEEEEEEEC
T ss_pred EEEECCc--CCCcccCCEEE-------------EEEEEEeCCCCCCCeEEEEEEEEEEC
Confidence 8655412 79999999998 79999998 544 889999999987
No 30
>2ee0_A Protocadherin-9; Ca domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.89 E-value=8.9e-24 Score=148.61 Aligned_cols=88 Identities=31% Similarity=0.459 Sum_probs=80.7
Q ss_pred EEEeeCCCCCCccCCCceEEEEecCCCCCCCCEEEEEEEEeCCC--CCeEEEEEeeC---CCCCcEEEcC-CeeEEEccc
Q psy9046 126 IKVLDVNDNRPEFKSKTYRTSIQENIIITPSPTLLTLEATDSDE--NPHLTYKILSG---NDDDVFAVDD-TGILTIQGP 199 (215)
Q Consensus 126 I~V~DvNdn~P~f~~~~~~~~v~E~~~~g~~~~i~~v~a~D~D~--~~~i~y~i~~~---~~~~~F~Id~-~G~i~~~~~ 199 (215)
|+|.|+|||+|.|.+..|.+.|.|++++| +.|++++|+|+|. |+.++|+|.++ +..++|.|++ +|.|++.++
T Consensus 2 ~~V~DvNDn~P~F~~~~y~~~v~En~~~G--t~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~~~~F~Id~~tG~I~~~~~ 79 (114)
T 2ee0_A 2 SSGSSGNDNRPVFKEGQVEVHIPENAPVG--TSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLITVQRS 79 (114)
T ss_dssp CCCCCCCCCCCCCSCSEEEEEEETTCCTT--CEEEECCCCSCSSCCCSCCEEEECSSCCHHHHHHEEECTTTCEEEECSC
T ss_pred CeEeeCCCCCCCcCCCcEEEEEECCCCCC--CEEEEEEEEeCCCCCCcEEEEEEccCCCCCccceEEEeCCeeEEEECcc
Confidence 56899999999999999999999999988 9999999999998 88999999863 2457899999 999999999
Q ss_pred CCCC-ccEEEEEEEEEC
Q psy9046 200 LAKG-KTVYNLLVQVSD 215 (215)
Q Consensus 200 ld~~-~~~y~l~V~a~D 215 (215)
||+| ...|.|+|+|+|
T Consensus 80 LD~E~~~~y~l~V~A~D 96 (114)
T 2ee0_A 80 LDREETAIHKVTVLASD 96 (114)
T ss_dssp CCTTTCSEEEEEEEEES
T ss_pred CCcccCcEEEEEEEEEE
Confidence 9965 789999999998
No 31
>3qrb_A Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus musculus} PDB: 1ff5_A 3lng_A 2qvf_B 1edh_A 3lne_A 1q1p_A 3lni_A 3q2l_A* 3q2n_A* 3lnh_A 3lnf_A 2o72_A 1suh_A
Probab=99.88 E-value=1.2e-22 Score=158.05 Aligned_cols=109 Identities=25% Similarity=0.305 Sum_probs=95.0
Q ss_pred CeEEEEEEEecCCCCCccCCCCCCCCCceEEEEecCCCCCcEEEEEEEEeCCCC---c---eeEEEecC------CCcEE
Q psy9046 1 MGTLIISIIDVNDIPPEFEPPWTRDEPNYLLEIEEEQPIGSLLGKFTALDKDSS---I---ALYVLEQD------GDMFS 68 (215)
Q Consensus 1 t~~v~I~V~DvND~~P~f~~~~~~~~~~~~~~V~E~~~~g~~v~~v~a~D~D~~---~---~~y~i~~~------~~~F~ 68 (215)
+++|+|.|.|+|||+|.| ....|.+.|+|+.++|+.|+++.|+|+|.+ . ..|+|..+ .++|.
T Consensus 91 ~~~v~I~V~DvNDn~P~F------~~~~y~~~v~En~~~gt~v~~v~A~D~D~~~~~~n~~i~Y~i~~~~~~~~~~~~F~ 164 (213)
T 3qrb_A 91 PMEIVITVTDQNDNRPEF------TQEVFEGSVAEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQDPELPHKNMFT 164 (213)
T ss_dssp CEEEEEEEECCSCCCCEE------SCSEEEEEEETTCCTTCEEEECCEECCSCTTTSSTTCCEEEEEEEESCCSCSCSEE
T ss_pred eEEEEEEEEEccCCCCcc------CCCceEEEEECCCCCCcEEEEEEEEeCCCCCCCcCcEEEEEEccCCCCCCcCCeEE
Confidence 478999999999999999 588999999999999999999999999987 3 36999643 46999
Q ss_pred EeCCccceEEEEEEEecCCCcceeeEEEEecCCCCCeEEEEEEEEeCCCC--ceEEEEEEEEee
Q psy9046 69 VNNITVCEFQLSVDLAAADNFQSEYNATIKENSPGDTKVVLVSAEDASTP--CSHFRVNIKVLD 130 (215)
Q Consensus 69 id~~tg~~~~~~~~~~ld~e~~~~~~~~~~e~~~~~~~~l~v~a~D~~~~--~~~~~v~I~V~D 130 (215)
|++.+|.+.+... .||||....|. |.|+|+|.|.+ +++++|+|+|.|
T Consensus 165 Id~~tG~i~~~~~--~LD~E~~~~y~-------------l~V~A~D~g~~~~s~t~~v~I~V~D 213 (213)
T 3qrb_A 165 VNRDTGVISVLTS--GLDRESYPTYT-------------LVVQAADLQGEGLSTTAKAVITVKD 213 (213)
T ss_dssp ECTTTCEEEECSS--CCCTTTCCEEE-------------EEEEEETGGGTSCEEEEEEEEEEEC
T ss_pred EECCCcEEEEccC--CCCCccCceEE-------------EEEEEEeCCCCCceEEEEEEEEEEC
Confidence 9999998665422 79999999998 78999998755 888999999987
No 32
>3lnd_A CDH6 protein, cadherin 6; cell adhesion, cell membrane, membrane, transmembr; 2.82A {Mus musculus}
Probab=99.88 E-value=1.9e-22 Score=156.28 Aligned_cols=109 Identities=27% Similarity=0.348 Sum_probs=94.1
Q ss_pred CeEEEEEEEecCCCCCccCCCCCCCCCceEEEEecCCCCCcEEEEEEEEeCCC---Cc---eeEEEecCCCcEEEeCCcc
Q psy9046 1 MGTLIISIIDVNDIPPEFEPPWTRDEPNYLLEIEEEQPIGSLLGKFTALDKDS---SI---ALYVLEQDGDMFSVNNITV 74 (215)
Q Consensus 1 t~~v~I~V~DvND~~P~f~~~~~~~~~~~~~~V~E~~~~g~~v~~v~a~D~D~---~~---~~y~i~~~~~~F~id~~tg 74 (215)
+++|+|.|.|+|||+|.| ....|.+.|+|+.++|+.|+++.|+|+|. |. ..|+|..++.+|.|++.+|
T Consensus 89 ~~~v~I~V~DvNDn~P~F------~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~~g~n~~i~Y~i~~~~~~F~Id~~tG 162 (207)
T 3lnd_A 89 ESEFIIKIHDINDNEPIF------TKDVYTATVPEMADVGTFVVQVTATDADDPTYGNSAKVVYSILQGQPYFSVESETG 162 (207)
T ss_dssp CCCCEEEEECCSCCCCEE------SCSEEEEEEESSCCTTCEEEECCEECSSCTTSSSTTCCEEEEEESGGGEEECTTTC
T ss_pred EEEEEEEECccCCCCCcc------CCCceEEEEeCCCCCCCEEEEEEEEeCCCCCCCCCcEEEEEEcCCCCCEEEcCCCc
Confidence 467899999999999999 58999999999999999999999999997 44 4799998889999999999
Q ss_pred ceEEEEEEEecCCCcceeeEEEEecCCCCCeEEEEEEEEeCCC----CceEEEEEEEEee
Q psy9046 75 CEFQLSVDLAAADNFQSEYNATIKENSPGDTKVVLVSAEDAST----PCSHFRVNIKVLD 130 (215)
Q Consensus 75 ~~~~~~~~~~ld~e~~~~~~~~~~e~~~~~~~~l~v~a~D~~~----~~~~~~v~I~V~D 130 (215)
.+.+... .||||....|. |.|+|+|+|. .+++++|+|+|.|
T Consensus 163 ~i~~~~~--~lD~E~~~~y~-------------l~V~A~D~g~~~~~~s~t~~v~I~V~D 207 (207)
T 3lnd_A 163 IIKTALL--NMDRENREQYQ-------------VVIQAKDMGGQMGGLSGTTTVNITLTD 207 (207)
T ss_dssp EEEECCS--SCCC--CCEEE-------------EEEEEESGGGCTTCBEEEEEEEEEEEC
T ss_pred EEEECcc--cCCcccCCEEE-------------EEEEEEECCCCCCCcEeEEEEEEEEeC
Confidence 8655412 79999999998 7999999874 3889999999987
No 33
>2qvi_A Cadherin-2; beta barrel, strand SWAP, domain SWAP, calcium, cell adhesion, cleavage on PAIR of basic residues, glycoprotein, membrane; 3.01A {Mus musculus} SCOP: b.1.6.1 b.1.6.1 PDB: 1ncj_A
Probab=99.88 E-value=1.7e-22 Score=157.39 Aligned_cols=109 Identities=24% Similarity=0.331 Sum_probs=94.5
Q ss_pred CeEEEEEEEecCCCCCccCCCCCCCCCceEEEEecCCCCCcEEEEEEEEeCCC--Cc---eeEEEecC------CCcEEE
Q psy9046 1 MGTLIISIIDVNDIPPEFEPPWTRDEPNYLLEIEEEQPIGSLLGKFTALDKDS--SI---ALYVLEQD------GDMFSV 69 (215)
Q Consensus 1 t~~v~I~V~DvND~~P~f~~~~~~~~~~~~~~V~E~~~~g~~v~~v~a~D~D~--~~---~~y~i~~~------~~~F~i 69 (215)
+++|+|.|.|+|||+|.| ....|.+.|+|+.++|+.|+++.|+|+|. +. ..|+|..+ .+.|.|
T Consensus 91 ~~~v~I~V~DvNDn~P~F------~~~~y~~~v~En~~~gt~v~~v~A~D~D~~~g~n~~i~Y~i~~~~~~~~~~~~F~I 164 (215)
T 2qvi_A 91 PIDIVINVIDMNDNRPEF------LHQVWNGSVPEGSKPGTYVMTVTAIDADDPNALNGMLRYRILSQAPSTPSPNMFTI 164 (215)
T ss_dssp EEEEEEEEECCCCCCCBC------SSSEEEEEECSSCCTTCEEEECCCBCSSCTTSTTTCCCCEEEECSSCCSSTTCEEE
T ss_pred eEEEEEEEeECCCCCCcc------cCceeEEEEeCCCCCCCEEEEEEEEeCCCCCCCCcEEEEEEecCCCCCCcCCeEEE
Confidence 368999999999999999 58899999999999999999999999998 33 46999764 479999
Q ss_pred eCCccceEEEEEEEecCCCcceeeEEEEecCCCCCeEEEEEEEEeCCCC-----ceEEEEEEEEee
Q psy9046 70 NNITVCEFQLSVDLAAADNFQSEYNATIKENSPGDTKVVLVSAEDASTP-----CSHFRVNIKVLD 130 (215)
Q Consensus 70 d~~tg~~~~~~~~~~ld~e~~~~~~~~~~e~~~~~~~~l~v~a~D~~~~-----~~~~~v~I~V~D 130 (215)
++.+|.+.+... .||||....|. |.|+|+|.+.+ +++++|+|+|+|
T Consensus 165 d~~tG~i~~~~~--~LD~E~~~~y~-------------l~V~a~D~g~~p~~~ls~t~~v~I~V~D 215 (215)
T 2qvi_A 165 NNETGDIITVAA--GLDREKVQQYT-------------LIIQATDMEGNPTYGLSNTATAVITVTD 215 (215)
T ss_dssp CTTTCEEEECSC--CCCTTTCSEEE-------------EEEECCTTTTCTTTSCCCEEEEEEEECC
T ss_pred cCCCcEEEEecC--CCCcccCCeEE-------------EEEEEEECCCCCCCCcceEEEEEEEEEC
Confidence 999998665422 79999999998 79999998654 788999999987
No 34
>3k5r_A Cadherin 13; mouse, structural protein; 2.00A {Mus musculus} PDB: 3k5s_A
Probab=99.87 E-value=2.5e-22 Score=156.78 Aligned_cols=111 Identities=23% Similarity=0.306 Sum_probs=94.2
Q ss_pred CeEEEEEEEecCCCCCccCCCCCCCCCceEEEEecCCCCCcEEEEEEEEeCCC--Cc---eeEEEecCC------CcEEE
Q psy9046 1 MGTLIISIIDVNDIPPEFEPPWTRDEPNYLLEIEEEQPIGSLLGKFTALDKDS--SI---ALYVLEQDG------DMFSV 69 (215)
Q Consensus 1 t~~v~I~V~DvND~~P~f~~~~~~~~~~~~~~V~E~~~~g~~v~~v~a~D~D~--~~---~~y~i~~~~------~~F~i 69 (215)
+++|+|.|.|+|||+|.| ....|.+.|+|+.++|+.|+++.|+|+|. +. ..|+|..++ ++|.|
T Consensus 91 ~~~v~I~V~DvNDn~P~F------~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~g~n~~i~Y~i~~~~~~~~~~~~F~I 164 (218)
T 3k5r_A 91 PVPLEVIVIDQNDNRPIF------REGPYIGHVMEGSPTGTTVMRMTAFDADDPATDNALLRYNIRQQTPDKPSPNMFYI 164 (218)
T ss_dssp EEEEEEEEECTTCCCCCC------CSCSEEEEEETTCCTTCEEEECCCSCSSSSCGGGGCEEEEEEEEESCCSCSCSEEE
T ss_pred eEEEEEEEEeCCCCCCcc------cCCceEEEEECCCCCCCEEEEEEEEeCCCCCCCCcEEEEEEecCCCCCCcCCEEEE
Confidence 468999999999999999 58899999999999999999999999998 33 469996543 67999
Q ss_pred eCCccceEEEEEEEecCCCc--ceeeEEEEecCCCCCeEEEEEEEEeCC--C--CceEEEEEEEEee
Q psy9046 70 NNITVCEFQLSVDLAAADNF--QSEYNATIKENSPGDTKVVLVSAEDAS--T--PCSHFRVNIKVLD 130 (215)
Q Consensus 70 d~~tg~~~~~~~~~~ld~e~--~~~~~~~~~e~~~~~~~~l~v~a~D~~--~--~~~~~~v~I~V~D 130 (215)
++.+|.+.++.....||||. ...|. |.|+|+|+| . .+++++|+|+|.|
T Consensus 165 d~~tG~i~~~~~~~~LD~E~~~~~~y~-------------l~V~a~D~gg~~p~~sst~~v~I~V~D 218 (218)
T 3k5r_A 165 DPEKGDIVTVVSPALLDRETLENPKYE-------------LIIEAQDMAGLDVGLTGTATATIVIDD 218 (218)
T ss_dssp CTTTCEEEECSCGGGCCGGGCSCSEEE-------------EEEEEEECSSTTTTCEEEEEEEEEEEC
T ss_pred ECCccEEEEeccCCCCCccccCCCeEE-------------EEEEEEECCCCCCCeeEEEEEEEEEEC
Confidence 99999866553112799999 66888 799999998 3 3889999999987
No 35
>2yst_A Protocadherin-7; BH-PCDH, beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.87 E-value=7.2e-23 Score=145.07 Aligned_cols=88 Identities=23% Similarity=0.371 Sum_probs=80.8
Q ss_pred EEEeeCCCCCCccCCCceEEEEecCCCCCCCCEEEEEEEEeCCC--CCeEEEEEeeCCC--CCcEEEcC-CeeEEEcccC
Q psy9046 126 IKVLDVNDNRPEFKSKTYRTSIQENIIITPSPTLLTLEATDSDE--NPHLTYKILSGND--DDVFAVDD-TGILTIQGPL 200 (215)
Q Consensus 126 I~V~DvNdn~P~f~~~~~~~~v~E~~~~g~~~~i~~v~a~D~D~--~~~i~y~i~~~~~--~~~F~Id~-~G~i~~~~~l 200 (215)
++|.|+|||+|.|.+..|.+.|.|++++| +.|++++|+|+|. |+.++|+|.++.. ..+|.|++ +|.|++.++|
T Consensus 2 ~~V~DvNDn~P~F~~~~y~~~v~En~~~G--t~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~~~F~Id~~tG~I~~~~~L 79 (119)
T 2yst_A 2 SSGSSGNDNSPRFEKSVYEADLAENSAPG--TPILQLRAADLDVGVNGQIEYVFGAATESVRRLLRLDETSGWLSVLHRI 79 (119)
T ss_dssp CCCCCSCCCCCCCSSSEEEEEEETTCCTT--CEEEECCCCCSSSSCCSCCCCEECSCCTTHHHHEEECTTTCEEEECSCC
T ss_pred CeEecCCCCCCCcCCCcEEEEEECCCCCC--CEEEEEEEEeCCCCCCCeEEEEEecCCCccccEEEEeCCceEEEECccC
Confidence 46899999999999999999999999988 9999999999998 8999999987543 36899999 9999999999
Q ss_pred CCC-ccEEEEEEEEEC
Q psy9046 201 AKG-KTVYNLLVQVSD 215 (215)
Q Consensus 201 d~~-~~~y~l~V~a~D 215 (215)
|+| ...|.|.|+|+|
T Consensus 80 D~E~~~~y~l~V~A~D 95 (119)
T 2yst_A 80 DREEVNQLRFTVMARD 95 (119)
T ss_dssp CTTTCSEEEEEEEECC
T ss_pred CcccCCEEEEEEEEEE
Confidence 965 789999999987
No 36
>2yqg_A Desmoglein-2, HDGC; cadherin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.85 E-value=2.9e-22 Score=142.63 Aligned_cols=108 Identities=20% Similarity=0.124 Sum_probs=92.8
Q ss_pred cCCCCCccCCCCCCCCCceEEEEecCCCCCcEEEEEEEEeCCCCc---eeEEEecC------CCcEEEeCCccceEEEEE
Q psy9046 11 VNDIPPEFEPPWTRDEPNYLLEIEEEQPIGSLLGKFTALDKDSSI---ALYVLEQD------GDMFSVNNITVCEFQLSV 81 (215)
Q Consensus 11 vND~~P~f~~~~~~~~~~~~~~V~E~~~~g~~v~~v~a~D~D~~~---~~y~i~~~------~~~F~id~~tg~~~~~~~ 81 (215)
.+.+.|.| ..+.|.+.+.|+.++|+.|+++. +|+|.+. .+|+|..+ .++|.|++.+|.+.+.+
T Consensus 5 ~~r~~p~f------~~~~~~v~e~e~~~~gt~v~~v~-~D~D~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~- 76 (123)
T 2yqg_A 5 SSGQKRAW------ITAPVALREGEDLSKKNPIAKIH-SDLAEERGLKITYKYTGKGITEPPFGIFVFNKDTGELNVTS- 76 (123)
T ss_dssp SSCSCCSS------CCCCEEEESSSCCCSSCCCBCCC-CHHHHHHTCCCEEEEEEBTTTBSSCSSEEEETTTTEEEECS-
T ss_pred ccccCCcc------CCCCEEEEecCCCCCCCEEEEEE-ECCCCCCCceEEEEEecCCCCCCcCCCEEEeCCcCEEEECc-
Confidence 46789999 47888888999999999999999 6999764 47999753 47999999999866544
Q ss_pred EEecCCCcceeeEEEEecCCCCCeEEEEEEEEeCCCC--ceEEEEEEEEeeCCCCCCccCCC
Q psy9046 82 DLAAADNFQSEYNATIKENSPGDTKVVLVSAEDASTP--CSHFRVNIKVLDVNDNRPEFKSK 141 (215)
Q Consensus 82 ~~~ld~e~~~~~~~~~~e~~~~~~~~l~v~a~D~~~~--~~~~~v~I~V~DvNdn~P~f~~~ 141 (215)
.||||....|. |+|.|+|++.+ ++++.|.|+|+|+|||+|+|.++
T Consensus 77 --~LDrE~~~~y~-------------l~V~A~D~g~p~~~~~~~v~I~V~DvNDn~P~F~~~ 123 (123)
T 2yqg_A 77 --ILDREETPFFL-------------LTGYALDARGNNVEKPLELRIKVLDINDNEPVFTQD 123 (123)
T ss_dssp --CCBTTTBSEEE-------------EEEEEECTTCCEEEEEECCEEEEECTTCCCCCCCCC
T ss_pred --ccCcccCceEE-------------EEEEEEECCCCceEEEEEEEEEEEEcCCCCCEeCCC
Confidence 79999999998 79999999876 77899999999999999999763
No 37
>4apx_B Protocadherin-15, otocadherin; cell adhesion, hearing, deafness, CDH23, PCDH15; HET: MES; 1.65A {Mus musculus} PDB: 4aq8_C 4aqa_B* 4aqe_B* 4axw_B*
Probab=99.85 E-value=5.7e-21 Score=151.03 Aligned_cols=107 Identities=21% Similarity=0.294 Sum_probs=90.5
Q ss_pred eEEEEEEEecCCCCCccCCCCCCCCCceEEEEecCCCCCcEEEE-----EEEEeCCCCce---eEEEecCC------CcE
Q psy9046 2 GTLIISIIDVNDIPPEFEPPWTRDEPNYLLEIEEEQPIGSLLGK-----FTALDKDSSIA---LYVLEQDG------DMF 67 (215)
Q Consensus 2 ~~v~I~V~DvND~~P~f~~~~~~~~~~~~~~V~E~~~~g~~v~~-----v~a~D~D~~~~---~y~i~~~~------~~F 67 (215)
++|+|.|.|+|||+|+| .+..|.+.|+|+.++|+.|.+ +.|+|+|.|.+ .|+|..++ +.|
T Consensus 111 ~~V~I~V~DvNDn~P~F------~~~~y~~~v~En~~~Gt~v~~~~~~~v~A~D~D~g~N~~v~Ysi~~~~~~~~~~~~F 184 (242)
T 4apx_B 111 HEVRIVVRDRNDNSPTF------KHESYYATVNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQYNPEDPTSNDTF 184 (242)
T ss_dssp EEEEEEEECCCCCCCEE------SSSCEEEEEETTCCTTCEEECTTTTTTSEECCSSGGGGCEEEEEECCTTSTTHHHHE
T ss_pred EEEEEEEEeCCCCCCcc------cceeeeeEeeeccCCCCEEEEeeecccccccCCCCcCCceEEEEecCCCCcccccce
Confidence 57899999999999999 589999999999999999976 78999999764 69997553 469
Q ss_pred EEeC-CccceEEEEEEEecCCCcceeeEEEEecCCCCCeEEEEEEEEeCCCC-----ceEEEEEEEEee
Q psy9046 68 SVNN-ITVCEFQLSVDLAAADNFQSEYNATIKENSPGDTKVVLVSAEDASTP-----CSHFRVNIKVLD 130 (215)
Q Consensus 68 ~id~-~tg~~~~~~~~~~ld~e~~~~~~~~~~e~~~~~~~~l~v~a~D~~~~-----~~~~~v~I~V~D 130 (215)
.|+. .+|.+.+.+ .||||....|. |.|+|+|+|.| ++.+.|+|+|.-
T Consensus 185 ~Id~~~tG~i~~~~---~LD~E~~~~y~-------------l~V~A~D~G~~~~~~~~~~~~vtVnVe~ 237 (242)
T 4apx_B 185 EIPLMLTGNVVLRK---RLNYEDKTRYY-------------VIIQANDRAQNLNERRTTTTTLTVDLEH 237 (242)
T ss_dssp ECSSTTTCCEEECS---CCCTTTCCEEE-------------EEEEEEECCSSGGGCCEEEEEEEEEEEC
T ss_pred EEcCCCceEEEECC---cCChhhCCEEE-------------EEEEEEECCcCchhcccCCceEEEEEee
Confidence 9995 589866554 79999999998 79999999877 456777777763
No 38
>1wyj_A Protocadherin beta 14; SS bond, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Mus musculus}
Probab=99.83 E-value=1.6e-21 Score=138.97 Aligned_cols=103 Identities=19% Similarity=0.184 Sum_probs=86.8
Q ss_pred CCceEEEEecCCCCCcEEEEEEEEeCCCCc--e---eEEEecC--CCcEEEeCCccceEEEEEEEecCCCcc----eeeE
Q psy9046 26 EPNYLLEIEEEQPIGSLLGKFTALDKDSSI--A---LYVLEQD--GDMFSVNNITVCEFQLSVDLAAADNFQ----SEYN 94 (215)
Q Consensus 26 ~~~~~~~V~E~~~~g~~v~~v~a~D~D~~~--~---~y~i~~~--~~~F~id~~tg~~~~~~~~~~ld~e~~----~~~~ 94 (215)
...|.++|+|+.++|+.|+++ |+|+|.+. . .|+|..+ ..+|.||+.+|.+.+.+ +||||.. ..|.
T Consensus 10 ~~~~~~~V~E~~~~Gt~V~~v-a~D~d~~~~~i~~~~Y~i~~~~~~~~F~Id~~tG~i~~~~---~LDRE~~c~~~~~y~ 85 (125)
T 1wyj_A 10 SATITYSVLEETDRGSLVGNL-AKDLGLSLRELITRGAQILSKGNKQLLQLEQKSGNLLLKE---KLDREELCGSTNPCI 85 (125)
T ss_dssp CCCCCEEECSSCCTTCEEEES-TTTTTCCHHHHHHTTCEEECSSSSCSEEECSSSSEEEESS---CCCSTTTCTTCSSCC
T ss_pred CceEEEEEECCCCCCCEEEEE-EecCCCCCCceeeEEEEEecCCCCCeEEEECCccEEEECc---cccchhhcccCCcEE
Confidence 456788999999999999999 99999874 2 6999653 47999999999866554 7999988 8888
Q ss_pred EEEecCCCCCeEEEEEEEEeCCCCceEEEEEEEEeeCCCCCCccCCCceEEE
Q psy9046 95 ATIKENSPGDTKVVLVSAEDASTPCSHFRVNIKVLDVNDNRPEFKSKTYRTS 146 (215)
Q Consensus 95 ~~~~e~~~~~~~~l~v~a~D~~~~~~~~~v~I~V~DvNdn~P~f~~~~~~~~ 146 (215)
|.+.|.+.. |...++|.|+|+|+|||+|+|.++.|.++
T Consensus 86 -------------l~v~a~~~~-p~~~~~V~I~V~DvNDN~P~F~~~~y~vs 123 (125)
T 1wyj_A 86 -------------LHFQVLLKS-PVQFIQGEIQLQDVNDHAPEFMEDESGPS 123 (125)
T ss_dssp -------------BCCEEEETT-TTEEECCCEEECCCCCCCCCCCCCCCCCC
T ss_pred -------------EEEEEEECC-CCeEEEEEEEEEEccCCCCcCCCcEEEEe
Confidence 678888754 46788999999999999999999988654
No 39
>1ncg_A N-cadherin; cell adhesion protein; 2.10A {Mus musculus} SCOP: b.1.6.1 PDB: 1nch_A 1nci_A
Probab=99.79 E-value=1.8e-19 Score=125.74 Aligned_cols=93 Identities=19% Similarity=0.216 Sum_probs=68.3
Q ss_pred CceEEEEecCCCCCcE--EEEEEEEeCCCCc---eeEEEecC------CCcEEEeCCccceEEEEEEEecCCCcceeeEE
Q psy9046 27 PNYLLEIEEEQPIGSL--LGKFTALDKDSSI---ALYVLEQD------GDMFSVNNITVCEFQLSVDLAAADNFQSEYNA 95 (215)
Q Consensus 27 ~~~~~~V~E~~~~g~~--v~~v~a~D~D~~~---~~y~i~~~------~~~F~id~~tg~~~~~~~~~~ld~e~~~~~~~ 95 (215)
..|.++|+||+++|+. |+++ |.|.+. .+|+|..+ .++|.|++.+|.+.+.+ +||||....|.
T Consensus 5 ~~~~~~v~En~~~gt~~~v~~v---d~D~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~---~LDrE~~~~y~- 77 (110)
T 1ncg_A 5 VIPPINLPENSRGPFPQELVRI---RSGRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTK---PLDRELIARFH- 77 (110)
T ss_dssp CCCCEEECSSCCCCSSEEEEEC---CCGGGGGSCCEEEEESBTTTBSSTTSEEECTTTCEEEECS---CCCTTTCCEEE-
T ss_pred EeeeEEEeCCCCCCCcEEEEEE---eCCCCCCCEEEEEEeCCCCCCCcCCEEEEECCCCEEEECC---cCCcccCCeEE-
Confidence 4578999999999994 5555 556543 47999752 47999999999866544 79999999998
Q ss_pred EEecCCCCCeEEEEEEEEeCCCC--ceEEEEEEEEeeCCCCCCcc
Q psy9046 96 TIKENSPGDTKVVLVSAEDASTP--CSHFRVNIKVLDVNDNRPEF 138 (215)
Q Consensus 96 ~~~e~~~~~~~~l~v~a~D~~~~--~~~~~v~I~V~DvNdn~P~f 138 (215)
|.|.|+|++.| ++++.|.|+|+|+|||+|+|
T Consensus 78 ------------l~V~A~D~g~p~~~~~~~v~I~V~DvNDn~P~F 110 (110)
T 1ncg_A 78 ------------LRAHAVDINGNQVENPIDIVINVIDMNDNRPEF 110 (110)
T ss_dssp ------------EEEEEECTTSCBCSCCEEEEEEEC---------
T ss_pred ------------EEEEEEECCCCceeeEEEEEEEEEECCCCCCCC
Confidence 79999999865 78899999999999999998
No 40
>3k6d_A T-cadherin; cell adhesion; 1.80A {Xenopus laevis} PDB: 2v37_A
Probab=99.68 E-value=1.7e-16 Score=108.42 Aligned_cols=85 Identities=19% Similarity=0.185 Sum_probs=73.7
Q ss_pred eEEEEecCCCC--CcEEEEEEEEeCCCCceeEEEecC------CCcEEEeCCccceEEEEEEEecCCCcceeeEEEEecC
Q psy9046 29 YLLEIEEEQPI--GSLLGKFTALDKDSSIALYVLEQD------GDMFSVNNITVCEFQLSVDLAAADNFQSEYNATIKEN 100 (215)
Q Consensus 29 ~~~~V~E~~~~--g~~v~~v~a~D~D~~~~~y~i~~~------~~~F~id~~tg~~~~~~~~~~ld~e~~~~~~~~~~e~ 100 (215)
+.++|+||.++ |+.|+++.|+|+|. ...|+|... .+.|.|++.+|.+.+.+ +||||....|.
T Consensus 5 ~~~~V~En~~~~~g~~v~~v~A~D~D~-~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~---~LDrE~~~~y~------ 74 (99)
T 3k6d_A 5 PSISIPENQRIPFPKIVGRVVVSDRIP-GSKIKLYGKGVDQEPKGIFKINENSGEVSVTK---ALDREAIPSYQ------ 74 (99)
T ss_dssp CCEEEETTCCSCSSEEEEECBCSSCCT-TCEEEEESBTTTBSSTTSEEECTTTCEEEECS---CCCTTTCCEEE------
T ss_pred CcEEEeCCCCCCCCcEEEEEEEECCCC-cEEEEEecCcCCCCCCCEEEEECCceEEEECc---CCCcccCceEE------
Confidence 46799999999 99999999999999 668999642 37999999999866554 79999999999
Q ss_pred CCCCeEEEEEEEEeCCCC--ceEEEEEEEEee
Q psy9046 101 SPGDTKVVLVSAEDASTP--CSHFRVNIKVLD 130 (215)
Q Consensus 101 ~~~~~~~l~v~a~D~~~~--~~~~~v~I~V~D 130 (215)
|+|.|+|+|.+ ++.+.|.|+|+|
T Consensus 75 -------l~V~A~D~g~~~l~~~~~v~I~V~D 99 (99)
T 3k6d_A 75 -------LQVETTDENGKTIEGPVDLEILVID 99 (99)
T ss_dssp -------EEEEEECTTCCEEEEEEEEEEEEEC
T ss_pred -------EEEEEEECCCCceeeEEEEEEEEEC
Confidence 79999999887 677889999886
No 41
>3k6f_A T-cadherin; cell adhesion, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein, membrane; 1.81A {Mus musculus}
Probab=99.66 E-value=5.5e-16 Score=106.04 Aligned_cols=84 Identities=20% Similarity=0.190 Sum_probs=73.0
Q ss_pred EEEEecCCCC--CcEEEEEEEEeCCCCceeEEEecC------CCcEEEeCCccceEEEEEEEecCCCcceeeEEEEecCC
Q psy9046 30 LLEIEEEQPI--GSLLGKFTALDKDSSIALYVLEQD------GDMFSVNNITVCEFQLSVDLAAADNFQSEYNATIKENS 101 (215)
Q Consensus 30 ~~~V~E~~~~--g~~v~~v~a~D~D~~~~~y~i~~~------~~~F~id~~tg~~~~~~~~~~ld~e~~~~~~~~~~e~~ 101 (215)
.+.|+||.+. |+.|++|.|+|+|. ...|+|... .+.|.|++.+|.+.+.+ +||||....|.
T Consensus 7 ~~~V~EN~~~~~g~~v~~V~A~D~D~-~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~---~LDrE~~~~y~------- 75 (100)
T 3k6f_A 7 PILIPENQRQPFPRDVGKVVDSDRPE-GSKFRLTGKGVDQDPKGTFRINENTGSVSVTR---TLDRETIATYQ------- 75 (100)
T ss_dssp CEEEETTCCSSSCEEEEECEETTCCT-TCEEEEEEBTTTBSSTTSEEECTTTCEEEECS---CCCTTTCSEEE-------
T ss_pred cEEEeCCCCCCCCcEEEEEEEEcCCC-CEEEEEeCCCCCCCcCCEEEEECCCCEEEECc---ccCCcCCCEEE-------
Confidence 5789999998 89999999999999 668999642 37999999999866544 79999999999
Q ss_pred CCCeEEEEEEEEeCCCC--ceEEEEEEEEee
Q psy9046 102 PGDTKVVLVSAEDASTP--CSHFRVNIKVLD 130 (215)
Q Consensus 102 ~~~~~~l~v~a~D~~~~--~~~~~v~I~V~D 130 (215)
|+|+|+|.|.+ ++.++|.|+|+|
T Consensus 76 ------l~V~A~D~g~p~l~~~~~v~I~V~D 100 (100)
T 3k6f_A 76 ------LYVETTDASGKTLEGPVPLEVIVID 100 (100)
T ss_dssp ------EEEEEECTTCCEEEEEEEEEEEEEC
T ss_pred ------EEEEEEECCCCcccceEEEEEEEEC
Confidence 79999999987 678899999887
No 42
>3k6i_A T-cadherin; cell adhesion, alternative splicing, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein; 1.13A {Gallus gallus}
Probab=99.65 E-value=9.3e-16 Score=104.73 Aligned_cols=84 Identities=21% Similarity=0.215 Sum_probs=72.8
Q ss_pred EEEEecCCCCC--cEEEEEEEEeCCCCceeEEEecC------CCcEEEeCCccceEEEEEEEecCCCcceeeEEEEecCC
Q psy9046 30 LLEIEEEQPIG--SLLGKFTALDKDSSIALYVLEQD------GDMFSVNNITVCEFQLSVDLAAADNFQSEYNATIKENS 101 (215)
Q Consensus 30 ~~~V~E~~~~g--~~v~~v~a~D~D~~~~~y~i~~~------~~~F~id~~tg~~~~~~~~~~ld~e~~~~~~~~~~e~~ 101 (215)
.++|+||.+.| +.|++|.|+|+|. ...|+|... .+.|.|++.+|.+.+.+ +||||....|.
T Consensus 6 ~~~v~EN~~~g~~~~v~~V~A~D~D~-~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~---~LDrE~~~~y~------- 74 (99)
T 3k6i_A 6 PILIPENQRPPFPRSVGKVIRSEGTE-GAKFRLSGKGVDQDPKGIFRINEISGDVSVTR---PLDREAIANYE------- 74 (99)
T ss_dssp CEEEETTCCSSSCEEEEECEETTCCS-SEEEEEESBTTTBSSTTSEEECTTTCEEEECS---CCCTTTCCEEE-------
T ss_pred cEEEeCCCCCCCCeEEEEEEEEcCCC-eEEEEEeCCCCCCCcCCEEEEECCCcEEEECc---ccCCccCCEEE-------
Confidence 46899999987 8999999999999 778999642 26999999999866554 79999999999
Q ss_pred CCCeEEEEEEEEeCCCC--ceEEEEEEEEee
Q psy9046 102 PGDTKVVLVSAEDASTP--CSHFRVNIKVLD 130 (215)
Q Consensus 102 ~~~~~~l~v~a~D~~~~--~~~~~v~I~V~D 130 (215)
|+|+|+|.|.+ ++.++|.|+|+|
T Consensus 75 ------l~v~A~D~g~~~l~~~~~v~I~V~D 99 (99)
T 3k6i_A 75 ------LEVEVTDLSGKIIDGPVRLDISVID 99 (99)
T ss_dssp ------EEEEEEETTSCEEEEEEEEEEEEEC
T ss_pred ------EEEEEEECCCCceeeeEEEEEEEEC
Confidence 79999999987 678899999887
No 43
>1zvn_A Mn-cadherin; strand dimer, ----; 2.16A {Gallus gallus}
Probab=99.61 E-value=1.7e-15 Score=103.27 Aligned_cols=86 Identities=22% Similarity=0.221 Sum_probs=72.5
Q ss_pred ceEEEEecCCC--CCcEEEEEEEEeCCCC--ceeEEEecCC--CcEEEeCCccceEEEEEEEecCCCcceeeEEEEecCC
Q psy9046 28 NYLLEIEEEQP--IGSLLGKFTALDKDSS--IALYVLEQDG--DMFSVNNITVCEFQLSVDLAAADNFQSEYNATIKENS 101 (215)
Q Consensus 28 ~~~~~V~E~~~--~g~~v~~v~a~D~D~~--~~~y~i~~~~--~~F~id~~tg~~~~~~~~~~ld~e~~~~~~~~~~e~~ 101 (215)
.+.++|+||.+ .|+.|+++. +|+|.| ...|+|..++ +.|.|++.+|.+++.+ +||||..+.|.
T Consensus 5 ~~~~~v~En~~~~~g~~v~~v~-~D~D~gNg~v~Ysi~~~~~~~~F~Id~~tG~i~~~~---~LDrE~~~~y~------- 73 (99)
T 1zvn_A 5 WNQFFVLEEYTGTDPLYVGKLH-SDMDRGDGSIKYILSGEGAGIVFTIDDTTGDIHAIQ---RLDREERSQYT------- 73 (99)
T ss_dssp CCEEEEEGGGCSSSCEEEEECC-BTTCCSSSCEEEEEEETTBTTTEEECTTTCEEEECS---CCCTTTCSEEE-------
T ss_pred ccEEEEECCCCCCCCcEEEEEE-ECCCCCCCEEEEEEeCCCCCceEEEeCCCCCEEECe---ecCCccCCeEE-------
Confidence 36789999976 689999999 999987 2369997643 5899999999877664 79999999999
Q ss_pred CCCeEEEEEEEEeCCC-C--ceEEEEEEEEee
Q psy9046 102 PGDTKVVLVSAEDAST-P--CSHFRVNIKVLD 130 (215)
Q Consensus 102 ~~~~~~l~v~a~D~~~-~--~~~~~v~I~V~D 130 (215)
|+|.|+|.|. | ++++.|.|+|.|
T Consensus 74 ------l~V~A~D~G~~p~l~~~~~v~I~V~D 99 (99)
T 1zvn_A 74 ------LRAQALDRRTGRPMEPESEFIIKIQD 99 (99)
T ss_dssp ------EEEEEEETTTCCBSSCCEEEEEEEEC
T ss_pred ------EEEEEEECCCCCCcceeEEEEEEEeC
Confidence 7999999983 4 788999999987
No 44
>1zxk_A Cadherin-8; strand dimer, cell adhesion; 2.00A {Mus musculus} PDB: 2a4c_A
Probab=99.61 E-value=2.4e-15 Score=102.36 Aligned_cols=85 Identities=27% Similarity=0.306 Sum_probs=72.1
Q ss_pred eEEEEecCCC--CCcEEEEEEEEeCCCC--ceeEEEecCC--CcEEEeCCccceEEEEEEEecCCCcceeeEEEEecCCC
Q psy9046 29 YLLEIEEEQP--IGSLLGKFTALDKDSS--IALYVLEQDG--DMFSVNNITVCEFQLSVDLAAADNFQSEYNATIKENSP 102 (215)
Q Consensus 29 ~~~~V~E~~~--~g~~v~~v~a~D~D~~--~~~y~i~~~~--~~F~id~~tg~~~~~~~~~~ld~e~~~~~~~~~~e~~~ 102 (215)
+.++|+||.+ .|+.|+++. +|+|.| ...|+|..++ ++|.|++.+|.+.+.+ +||||.++.|.
T Consensus 5 ~~~~v~En~~~p~~~~v~~v~-~D~D~gN~~v~Ysi~~~~~~~~F~Id~~tG~i~~~~---~LDrE~~~~y~-------- 72 (98)
T 1zxk_A 5 NQMFVLEEFSGPEPILVGRLH-TDLDPGSKKIKYILSGDGAGTIFQINDITGDIHAIK---RLDREEKAEYT-------- 72 (98)
T ss_dssp CEEEECGGGCSSSCEEEEECC-BCCCCC--CEEEEEEETTBTTTEEECTTTCEEEECS---CCCTTTCSEEE--------
T ss_pred ceEEEECCCCCCCCeEEEEEE-ECCCCCCCEEEEEEeCCCCCCEEEEECCccEEEECc---cCCCcCCCeEE--------
Confidence 6789999985 899999997 999997 2369997543 4899999999876654 79999999999
Q ss_pred CCeEEEEEEEEeCCC-C--ceEEEEEEEEee
Q psy9046 103 GDTKVVLVSAEDAST-P--CSHFRVNIKVLD 130 (215)
Q Consensus 103 ~~~~~l~v~a~D~~~-~--~~~~~v~I~V~D 130 (215)
|+|.|+|+|. + ++++.|.|+|+|
T Consensus 73 -----l~v~A~D~g~~~~l~~~~~v~I~V~D 98 (98)
T 1zxk_A 73 -----LTAQAVDFETNKPLEPPSEFIIKVQD 98 (98)
T ss_dssp -----EEEEEEETTTCCBSSCCEEEEEEECC
T ss_pred -----EEEEEEECCCCCCcceeEEEEEEEEC
Confidence 7999999986 3 788999999986
No 45
>1zvn_A Mn-cadherin; strand dimer, ----; 2.16A {Gallus gallus}
Probab=99.60 E-value=3.7e-15 Score=101.63 Aligned_cols=72 Identities=24% Similarity=0.286 Sum_probs=64.2
Q ss_pred eEEEEecCCCCCCCCEEEEEEEEeCCC-CCeEEEEEeeCCCCCcEEEcC-CeeEEEcccCCCC-ccEEEEEEEEEC
Q psy9046 143 YRTSIQENIIITPSPTLLTLEATDSDE-NPHLTYKILSGNDDDVFAVDD-TGILTIQGPLAKG-KTVYNLLVQVSD 215 (215)
Q Consensus 143 ~~~~v~E~~~~g~~~~i~~v~a~D~D~-~~~i~y~i~~~~~~~~F~Id~-~G~i~~~~~ld~~-~~~y~l~V~a~D 215 (215)
+.+.|.||.+.+.|+.|++|+ +|+|. |+.++|+|.+++..+.|.||+ +|.|++.++||+| ...|.|+|+|+|
T Consensus 6 ~~~~v~En~~~~~g~~v~~v~-~D~D~gNg~v~Ysi~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~D 80 (99)
T 1zvn_A 6 NQFFVLEEYTGTDPLYVGKLH-SDMDRGDGSIKYILSGEGAGIVFTIDDTTGDIHAIQRLDREERSQYTLRAQALD 80 (99)
T ss_dssp CEEEEEGGGCSSSCEEEEECC-BTTCCSSSCEEEEEEETTBTTTEEECTTTCEEEECSCCCTTTCSEEEEEEEEEE
T ss_pred cEEEEECCCCCCCCcEEEEEE-ECCCCCCCEEEEEEeCCCCCceEEEeCCCCCEEECeecCCccCCeEEEEEEEEE
Confidence 478999998754458999999 99999 899999998866667899999 9999999999965 789999999997
No 46
>2omz_B Epithelial-cadherin; leucine-rich-repeat, nvasion protein, IG-like domain, adhesi protein, cell invasion-cell adhesion complex; 1.60A {Homo sapiens} SCOP: b.1.6.1 PDB: 2omt_B 2omu_B 2omv_B 1o6s_B 2omy_B 2omx_B 3ff8_A 3ff7_A 2omw_B
Probab=99.58 E-value=3.4e-15 Score=102.96 Aligned_cols=86 Identities=13% Similarity=0.133 Sum_probs=70.6
Q ss_pred EEEEecCCC--CCcEEEEEEEEeCCCCceeEEEecCC------CcEEEeCCccceEEEEEEEecCCCcceeeEEEEecCC
Q psy9046 30 LLEIEEEQP--IGSLLGKFTALDKDSSIALYVLEQDG------DMFSVNNITVCEFQLSVDLAAADNFQSEYNATIKENS 101 (215)
Q Consensus 30 ~~~V~E~~~--~g~~v~~v~a~D~D~~~~~y~i~~~~------~~F~id~~tg~~~~~~~~~~ld~e~~~~~~~~~~e~~ 101 (215)
.++|+||.+ .|+.|+++.|.|...+...|+|..++ ++|.||+.+|.+.+.+ +||||.+..|.
T Consensus 10 ~~~V~En~~~~~~~~v~~v~Ad~g~N~~i~Ysi~~~~~~~~~~~~F~Id~~tG~I~~~~---~LDrE~~~~y~------- 79 (105)
T 2omz_B 10 PISCPENEKGPFPKNLVQIKSNKDKEGKVFYSITGQGADTPPVGVFIIERETGWLKVTE---PLDRERIATYT------- 79 (105)
T ss_dssp CCCEESSCCSSSSEEEEECEEGGGGSSCCEEEEEEBTTTBSSTTSEEECTTTCEEEECS---CCCTTTCCEEE-------
T ss_pred CEEEeCCCCCCCCcEEEEEECCCCCCCeEEEEEeCCCCCCCccCEEEEeCCCCEEEECc---cCCcCCCCeEE-------
Confidence 568999999 58899999995433455689997643 5899999999866554 79999999999
Q ss_pred CCCeEEEEEEEEeCCCC--ceEEEEEEEEeeC
Q psy9046 102 PGDTKVVLVSAEDASTP--CSHFRVNIKVLDV 131 (215)
Q Consensus 102 ~~~~~~l~v~a~D~~~~--~~~~~v~I~V~Dv 131 (215)
|+|+|+|+|.| ++++.|.|+|+|+
T Consensus 80 ------l~V~A~D~g~p~~~~~~~v~I~V~Dv 105 (105)
T 2omz_B 80 ------LFSHAVSSNGNAVEDPMEILITVTDQ 105 (105)
T ss_dssp ------EEEEEECTTSCBSSCCEEEEEEEEC-
T ss_pred ------EEEEEEECCCCceeeEEEEEEEEEeC
Confidence 79999999876 6789999999986
No 47
>2yqg_A Desmoglein-2, HDGC; cadherin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.57 E-value=2e-15 Score=107.18 Aligned_cols=82 Identities=16% Similarity=0.222 Sum_probs=73.7
Q ss_pred CCCCCCccCCCceEEEEecCCCCCCCCEEEEEEEEeCCC--CCeEEEEEeeC----CCCCcEEEcC-CeeEEEcccCCCC
Q psy9046 131 VNDNRPEFKSKTYRTSIQENIIITPSPTLLTLEATDSDE--NPHLTYKILSG----NDDDVFAVDD-TGILTIQGPLAKG 203 (215)
Q Consensus 131 vNdn~P~f~~~~~~~~v~E~~~~g~~~~i~~v~a~D~D~--~~~i~y~i~~~----~~~~~F~Id~-~G~i~~~~~ld~~ 203 (215)
.+.|.|.|..+.|.+.+.|++++| +.|++|. +|+|. |+.|+|+|.++ +..+.|.||+ +|.|++.++||+|
T Consensus 5 ~~r~~p~f~~~~~~v~e~e~~~~g--t~v~~v~-~D~D~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE 81 (123)
T 2yqg_A 5 SSGQKRAWITAPVALREGEDLSKK--NPIAKIH-SDLAEERGLKITYKYTGKGITEPPFGIFVFNKDTGELNVTSILDRE 81 (123)
T ss_dssp SSCSCCSSCCCCEEEESSSCCCSS--CCCBCCC-CHHHHHHTCCCEEEEEEBTTTBSSCSSEEEETTTTEEEECSCCBTT
T ss_pred ccccCCccCCCCEEEEecCCCCCC--CEEEEEE-ECCCCCCCceEEEEEecCCCCCCcCCCEEEeCCcCEEEECcccCcc
Confidence 468999999999999999999988 9999999 69998 88999999985 3457899999 9999999999965
Q ss_pred -ccEEEEEEEEEC
Q psy9046 204 -KTVYNLLVQVSD 215 (215)
Q Consensus 204 -~~~y~l~V~a~D 215 (215)
...|.|+|.|+|
T Consensus 82 ~~~~y~l~V~A~D 94 (123)
T 2yqg_A 82 ETPFFLLTGYALD 94 (123)
T ss_dssp TBSEEEEEEEEEC
T ss_pred cCceEEEEEEEEE
Confidence 789999999998
No 48
>1zxk_A Cadherin-8; strand dimer, cell adhesion; 2.00A {Mus musculus} PDB: 2a4c_A
Probab=99.55 E-value=1.3e-14 Score=98.69 Aligned_cols=70 Identities=23% Similarity=0.312 Sum_probs=60.8
Q ss_pred eEEEEecCCC--CCCCCEEEEEEEEeCCC-CCeEEEEEeeCCCCCcEEEcC-CeeEEEcccCCCC-ccEEEEEEEEEC
Q psy9046 143 YRTSIQENII--ITPSPTLLTLEATDSDE-NPHLTYKILSGNDDDVFAVDD-TGILTIQGPLAKG-KTVYNLLVQVSD 215 (215)
Q Consensus 143 ~~~~v~E~~~--~g~~~~i~~v~a~D~D~-~~~i~y~i~~~~~~~~F~Id~-~G~i~~~~~ld~~-~~~y~l~V~a~D 215 (215)
+.++|.||.+ .| +.|+++. +|+|. |+.++|+|.+++..+.|.||+ +|.|++.++||+| ...|.|+|+|+|
T Consensus 5 ~~~~v~En~~~p~~--~~v~~v~-~D~D~gN~~v~Ysi~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~A~D 79 (98)
T 1zxk_A 5 NQMFVLEEFSGPEP--ILVGRLH-TDLDPGSKKIKYILSGDGAGTIFQINDITGDIHAIKRLDREEKAEYTLTAQAVD 79 (98)
T ss_dssp CEEEECGGGCSSSC--EEEEECC-BCCCCC--CEEEEEEETTBTTTEEECTTTCEEEECSCCCTTTCSEEEEEEEEEE
T ss_pred ceEEEECCCCCCCC--eEEEEEE-ECCCCCCCEEEEEEeCCCCCCEEEEECCccEEEECccCCCcCCCeEEEEEEEEE
Confidence 5789999995 45 8999997 99999 899999998865667899999 9999999999965 789999999997
No 49
>3k6d_A T-cadherin; cell adhesion; 1.80A {Xenopus laevis} PDB: 2v37_A
Probab=99.52 E-value=2.3e-14 Score=97.79 Aligned_cols=69 Identities=20% Similarity=0.304 Sum_probs=61.5
Q ss_pred eEEEEecCCCC--CCCCEEEEEEEEeCCCCCeEEEEEee----CCCCCcEEEcC-CeeEEEcccCCCC-ccEEEEEEEEE
Q psy9046 143 YRTSIQENIII--TPSPTLLTLEATDSDENPHLTYKILS----GNDDDVFAVDD-TGILTIQGPLAKG-KTVYNLLVQVS 214 (215)
Q Consensus 143 ~~~~v~E~~~~--g~~~~i~~v~a~D~D~~~~i~y~i~~----~~~~~~F~Id~-~G~i~~~~~ld~~-~~~y~l~V~a~ 214 (215)
+.+.|.||.++ | +.|++|+|+|+|. .++|+|.+ ++..+.|.||+ +|.|++.++||+| ...|.|.|+|+
T Consensus 5 ~~~~V~En~~~~~g--~~v~~v~A~D~D~--~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~ 80 (99)
T 3k6d_A 5 PSISIPENQRIPFP--KIVGRVVVSDRIP--GSKIKLYGKGVDQEPKGIFKINENSGEVSVTKALDREAIPSYQLQVETT 80 (99)
T ss_dssp CCEEEETTCCSCSS--EEEEECBCSSCCT--TCEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEE
T ss_pred CcEEEeCCCCCCCC--cEEEEEEEECCCC--cEEEEEecCcCCCCCCCEEEEECCceEEEECcCCCcccCceEEEEEEEE
Confidence 37899999997 7 9999999999995 89999975 34568899999 9999999999965 78999999999
Q ss_pred C
Q psy9046 215 D 215 (215)
Q Consensus 215 D 215 (215)
|
T Consensus 81 D 81 (99)
T 3k6d_A 81 D 81 (99)
T ss_dssp C
T ss_pred E
Confidence 8
No 50
>1wuz_A Pcdha4 protein, CNR-EC1; cadherin, heteronuclear protocadherin, cell adhesion; NMR {Mus musculus}
Probab=99.49 E-value=7.7e-15 Score=100.83 Aligned_cols=90 Identities=26% Similarity=0.354 Sum_probs=69.5
Q ss_pred CceEEEEecCCCCCcEEEEEEEEeCCCCc-----eeEEEecC--CCcEEEeCCccceEEEEEEEecCCCcce----eeEE
Q psy9046 27 PNYLLEIEEEQPIGSLLGKFTALDKDSSI-----ALYVLEQD--GDMFSVNNITVCEFQLSVDLAAADNFQS----EYNA 95 (215)
Q Consensus 27 ~~~~~~V~E~~~~g~~v~~v~a~D~D~~~-----~~y~i~~~--~~~F~id~~tg~~~~~~~~~~ld~e~~~----~~~~ 95 (215)
..+.++|+|+.++|+.|+++ |.|+|.+. .+|+|..+ ..+|.|++.||.+++.+ +||||... .|.
T Consensus 3 ~~~~~~V~E~~~~Gt~Vg~v-a~D~~~~~~~~~~~~y~i~~~~~~~~F~Id~~tG~i~~~~---~LDRE~~~~~~~~~~- 77 (103)
T 1wuz_A 3 SQIHYSIPEEAKHGTFVGRI-AQDLGLELTELVPRLFRVASKDRGDLLEVNLQNGILFVNS---RIDREELCGRSAECS- 77 (103)
T ss_dssp CEEEEEEESSCCTTCBCCCH-HHHHTCCHHHHTTTTBCCBCSSCSCSEEEETTTTEEEECS---CCSHHHHCSSSSSCE-
T ss_pred eeEEEEEECCCCCCCEEEEE-EeccCCCCcccccEEEEEEeCCCccEEEEECCeEEEEECC---cCccccccCCCCcEE-
Confidence 56788999999999999999 99998753 46998653 47999999999876655 79999652 233
Q ss_pred EEecCCCCCeEEEEEEEEeCCCCceEEEEEEEEeeCCCC
Q psy9046 96 TIKENSPGDTKVVLVSAEDASTPCSHFRVNIKVLDVNDN 134 (215)
Q Consensus 96 ~~~e~~~~~~~~l~v~a~D~~~~~~~~~v~I~V~DvNdn 134 (215)
+.+.+... .|...+.|.|+|+|+|||
T Consensus 78 ------------~~~~v~~~-~p~~~~~v~I~V~DiNDN 103 (103)
T 1wuz_A 78 ------------IHLEVIVD-RPLQVFHVEVEVRDINDN 103 (103)
T ss_dssp ------------EEEEEEET-TTTEEEEEEEEEECCSCC
T ss_pred ------------EEEEEEEC-CCCEEEEEEEEEEEcCCC
Confidence 23333333 345689999999999997
No 51
>3k6i_A T-cadherin; cell adhesion, alternative splicing, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein; 1.13A {Gallus gallus}
Probab=99.49 E-value=1e-13 Score=94.49 Aligned_cols=70 Identities=19% Similarity=0.339 Sum_probs=61.1
Q ss_pred EEEEecCCCCCCCCEEEEEEEEeCCCCCeEEEEEeeC----CCCCcEEEcC-CeeEEEcccCCCC-ccEEEEEEEEEC
Q psy9046 144 RTSIQENIIITPSPTLLTLEATDSDENPHLTYKILSG----NDDDVFAVDD-TGILTIQGPLAKG-KTVYNLLVQVSD 215 (215)
Q Consensus 144 ~~~v~E~~~~g~~~~i~~v~a~D~D~~~~i~y~i~~~----~~~~~F~Id~-~G~i~~~~~ld~~-~~~y~l~V~a~D 215 (215)
.+.|.||.+.|-++.|++|+|+|+|. .++|+|.+. +..+.|.||+ +|.|++.++||+| ...|.|.|+|+|
T Consensus 6 ~~~v~EN~~~g~~~~v~~V~A~D~D~--~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~A~D 81 (99)
T 3k6i_A 6 PILIPENQRPPFPRSVGKVIRSEGTE--GAKFRLSGKGVDQDPKGIFRINEISGDVSVTRPLDREAIANYELEVEVTD 81 (99)
T ss_dssp CEEEETTCCSSSCEEEEECEETTCCS--SEEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEEE
T ss_pred cEEEeCCCCCCCCeEEEEEEEEcCCC--eEEEEEeCCCCCCCcCCEEEEECCCcEEEECcccCCccCCEEEEEEEEEE
Confidence 57899999875458899999999996 999999863 3457899999 9999999999965 789999999987
No 52
>3k6f_A T-cadherin; cell adhesion, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein, membrane; 1.81A {Mus musculus}
Probab=99.48 E-value=1.3e-13 Score=94.16 Aligned_cols=70 Identities=19% Similarity=0.314 Sum_probs=61.0
Q ss_pred EEEEecCCCCCCCCEEEEEEEEeCCCCCeEEEEEeeC----CCCCcEEEcC-CeeEEEcccCCCC-ccEEEEEEEEEC
Q psy9046 144 RTSIQENIIITPSPTLLTLEATDSDENPHLTYKILSG----NDDDVFAVDD-TGILTIQGPLAKG-KTVYNLLVQVSD 215 (215)
Q Consensus 144 ~~~v~E~~~~g~~~~i~~v~a~D~D~~~~i~y~i~~~----~~~~~F~Id~-~G~i~~~~~ld~~-~~~y~l~V~a~D 215 (215)
.+.|.||.+.+-|+.|++|+|+|+|. .++|+|.+. +..+.|.||+ +|.|++.++||+| ...|.|.|+|+|
T Consensus 7 ~~~V~EN~~~~~g~~v~~V~A~D~D~--~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~D 82 (100)
T 3k6f_A 7 PILIPENQRQPFPRDVGKVVDSDRPE--GSKFRLTGKGVDQDPKGTFRINENTGSVSVTRTLDRETIATYQLYVETTD 82 (100)
T ss_dssp CEEEETTCCSSSCEEEEECEETTCCT--TCEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCSEEEEEEEEEC
T ss_pred cEEEeCCCCCCCCcEEEEEEEEcCCC--CEEEEEeCCCCCCCcCCEEEEECCCCEEEECcccCCcCCCEEEEEEEEEE
Confidence 68999999873249999999999996 899999863 3457899999 9999999999965 789999999998
No 53
>2omz_B Epithelial-cadherin; leucine-rich-repeat, nvasion protein, IG-like domain, adhesi protein, cell invasion-cell adhesion complex; 1.60A {Homo sapiens} SCOP: b.1.6.1 PDB: 2omt_B 2omu_B 2omv_B 1o6s_B 2omy_B 2omx_B 3ff8_A 3ff7_A 2omw_B
Probab=99.45 E-value=1.7e-13 Score=94.41 Aligned_cols=71 Identities=23% Similarity=0.352 Sum_probs=59.3
Q ss_pred EEEEecCCCCCCCCEEEEEEEEeCCCCCeEEEEEeeCCC----CCcEEEcC-CeeEEEcccCCCC-ccEEEEEEEEEC
Q psy9046 144 RTSIQENIIITPSPTLLTLEATDSDENPHLTYKILSGND----DDVFAVDD-TGILTIQGPLAKG-KTVYNLLVQVSD 215 (215)
Q Consensus 144 ~~~v~E~~~~g~~~~i~~v~a~D~D~~~~i~y~i~~~~~----~~~F~Id~-~G~i~~~~~ld~~-~~~y~l~V~a~D 215 (215)
.+.|.||++...|..|+++.| |.+.|+.++|+|.+++. .+.|.||+ +|.|++.++||+| ...|.|+|+|+|
T Consensus 10 ~~~V~En~~~~~~~~v~~v~A-d~g~N~~i~Ysi~~~~~~~~~~~~F~Id~~tG~I~~~~~LDrE~~~~y~l~V~A~D 86 (105)
T 2omz_B 10 PISCPENEKGPFPKNLVQIKS-NKDKEGKVFYSITGQGADTPPVGVFIIERETGWLKVTEPLDRERIATYTLFSHAVS 86 (105)
T ss_dssp CCCEESSCCSSSSEEEEECEE-GGGGSSCCEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEEC
T ss_pred CEEEeCCCCCCCCcEEEEEEC-CCCCCCeEEEEEeCCCCCCCccCEEEEeCCCCEEEECccCCcCCCCeEEEEEEEEE
Confidence 578999998311279999999 44559999999988643 46899999 9999999999965 789999999998
No 54
>1ncg_A N-cadherin; cell adhesion protein; 2.10A {Mus musculus} SCOP: b.1.6.1 PDB: 1nch_A 1nci_A
Probab=99.41 E-value=3.9e-13 Score=93.42 Aligned_cols=71 Identities=20% Similarity=0.334 Sum_probs=58.9
Q ss_pred ceEEEEecCCCCCCCC--EEEEEEEEeCCCCCeEEEEEeeC----CCCCcEEEcC-CeeEEEcccCCCC-ccEEEEEEEE
Q psy9046 142 TYRTSIQENIIITPSP--TLLTLEATDSDENPHLTYKILSG----NDDDVFAVDD-TGILTIQGPLAKG-KTVYNLLVQV 213 (215)
Q Consensus 142 ~~~~~v~E~~~~g~~~--~i~~v~a~D~D~~~~i~y~i~~~----~~~~~F~Id~-~G~i~~~~~ld~~-~~~y~l~V~a 213 (215)
.|.++|.|++++| + .|+++ +.|.+.|+.++|+|.++ +..+.|.|++ +|.|++.++||+| ...|.|+|.|
T Consensus 6 ~~~~~v~En~~~g--t~~~v~~v-d~D~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A 82 (110)
T 1ncg_A 6 IPPINLPENSRGP--FPQELVRI-RSGRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKPLDRELIARFHLRAHA 82 (110)
T ss_dssp CCCEEECSSCCCC--SSEEEEEC-CCGGGGGSCCEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEE
T ss_pred eeeEEEeCCCCCC--CcEEEEEE-eCCCCCCCEEEEEEeCCCCCCCcCCEEEEECCCCEEEECCcCCcccCCeEEEEEEE
Confidence 3689999999988 7 46666 34444499999999863 4567899999 9999999999965 7899999999
Q ss_pred EC
Q psy9046 214 SD 215 (215)
Q Consensus 214 ~D 215 (215)
+|
T Consensus 83 ~D 84 (110)
T 1ncg_A 83 VD 84 (110)
T ss_dssp EC
T ss_pred EE
Confidence 98
No 55
>1wyj_A Protocadherin beta 14; SS bond, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Mus musculus}
Probab=99.23 E-value=1.1e-12 Score=93.09 Aligned_cols=71 Identities=23% Similarity=0.207 Sum_probs=61.3
Q ss_pred CceEEEEecCCCCCCCCEEEEEEEEeCCCC-CeE---EEEEeeCCCCCcEEEcC-CeeEEEcccCCCC-c----cEEEEE
Q psy9046 141 KTYRTSIQENIIITPSPTLLTLEATDSDEN-PHL---TYKILSGNDDDVFAVDD-TGILTIQGPLAKG-K----TVYNLL 210 (215)
Q Consensus 141 ~~~~~~v~E~~~~g~~~~i~~v~a~D~D~~-~~i---~y~i~~~~~~~~F~Id~-~G~i~~~~~ld~~-~----~~y~l~ 210 (215)
..|...|.|+.++| +.|+++ |+|.|.+ +.+ +|+|.+++..+.|.||+ +|.|++.++||+| . ..|.|.
T Consensus 11 ~~~~~~V~E~~~~G--t~V~~v-a~D~d~~~~~i~~~~Y~i~~~~~~~~F~Id~~tG~i~~~~~LDRE~~c~~~~~y~l~ 87 (125)
T 1wyj_A 11 ATITYSVLEETDRG--SLVGNL-AKDLGLSLRELITRGAQILSKGNKQLLQLEQKSGNLLLKEKLDREELCGSTNPCILH 87 (125)
T ss_dssp CCCCEEECSSCCTT--CEEEES-TTTTTCCHHHHHHTTCEEECSSSSCSEEECSSSSEEEESSCCCSTTTCTTCSSCCBC
T ss_pred ceEEEEEECCCCCC--CEEEEE-EecCCCCCCceeeEEEEEecCCCCCeEEEECCccEEEECccccchhhcccCCcEEEE
Confidence 45678999999988 999999 9999973 345 99999877788999999 9999999999965 5 789999
Q ss_pred EEEE
Q psy9046 211 VQVS 214 (215)
Q Consensus 211 V~a~ 214 (215)
|+|.
T Consensus 88 v~a~ 91 (125)
T 1wyj_A 88 FQVL 91 (125)
T ss_dssp CEEE
T ss_pred EEEE
Confidence 8886
No 56
>1wuz_A Pcdha4 protein, CNR-EC1; cadherin, heteronuclear protocadherin, cell adhesion; NMR {Mus musculus}
Probab=99.04 E-value=1e-11 Score=85.11 Aligned_cols=70 Identities=20% Similarity=0.221 Sum_probs=58.5
Q ss_pred CceEEEEecCCCCCCCCEEEEEEEEeCCCC----CeEEEEEeeCCCCCcEEEcC-CeeEEEcccCCCCcc-------EEE
Q psy9046 141 KTYRTSIQENIIITPSPTLLTLEATDSDEN----PHLTYKILSGNDDDVFAVDD-TGILTIQGPLAKGKT-------VYN 208 (215)
Q Consensus 141 ~~~~~~v~E~~~~g~~~~i~~v~a~D~D~~----~~i~y~i~~~~~~~~F~Id~-~G~i~~~~~ld~~~~-------~y~ 208 (215)
..+..+|.|++++| +.|++| |.|.|.+ +.++|+|.+++..++|.||+ +|.|++.++||+|.. .|.
T Consensus 3 ~~~~~~V~E~~~~G--t~Vg~v-a~D~~~~~~~~~~~~y~i~~~~~~~~F~Id~~tG~i~~~~~LDRE~~~~~~~~~~~~ 79 (103)
T 1wuz_A 3 SQIHYSIPEEAKHG--TFVGRI-AQDLGLELTELVPRLFRVASKDRGDLLEVNLQNGILFVNSRIDREELCGRSAECSIH 79 (103)
T ss_dssp CEEEEEEESSCCTT--CBCCCH-HHHHTCCHHHHTTTTBCCBCSSCSCSEEEETTTTEEEECSCCSHHHHCSSSSSCEEE
T ss_pred eeEEEEEECCCCCC--CEEEEE-EeccCCCCcccccEEEEEEeCCCccEEEEECCeEEEEECCcCccccccCCCCcEEEE
Confidence 35788999999988 999999 9999973 47899999877788999999 999999999996532 566
Q ss_pred EEEEE
Q psy9046 209 LLVQV 213 (215)
Q Consensus 209 l~V~a 213 (215)
+.|.|
T Consensus 80 ~~v~~ 84 (103)
T 1wuz_A 80 LEVIV 84 (103)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 66654
No 57
>1op4_A Neural-cadherin; beta sandwich, cadherin-like domain, cell adhesion; NMR {Mus musculus} SCOP: b.1.6.1
Probab=95.97 E-value=0.025 Score=40.93 Aligned_cols=78 Identities=14% Similarity=0.264 Sum_probs=56.6
Q ss_pred CCCCccCCCceEEEEecCCCCCCCCEEEEEEEEeCCCCCeEEEEEeeCCCCCcEEEcCCeeEEEcccCCCCccEEEEEEE
Q psy9046 133 DNRPEFKSKTYRTSIQENIIITPSPTLLTLEATDSDENPHLTYKILSGNDDDVFAVDDTGILTIQGPLAKGKTVYNLLVQ 212 (215)
Q Consensus 133 dn~P~f~~~~~~~~v~E~~~~g~~~~i~~v~a~D~D~~~~i~y~i~~~~~~~~F~Id~~G~i~~~~~ld~~~~~y~l~V~ 212 (215)
...|-|.+..|...++-....| ..+++|.-.|-..+..+.|.-.+ ...|.|+.+|.|++.+++.-....-.+.|.
T Consensus 31 ~C~pGF~~~~~~~~vp~~l~~g--~~lgkV~F~dC~g~~~~~~~ssD---p~dFkV~~DGtVya~r~v~L~~~~~~F~V~ 105 (159)
T 1op4_A 31 LCKTGFPEDVYSAVLPKDVHEG--QPLLNVKFSNCNRKRKVQYESSE---PADFKVDEDGTVYAVRSFPLTAEQAKFLIY 105 (159)
T ss_dssp CCCCBCCSCEEEECCCCSSCSS--CCEEECCCBCCSSCCCEEEECCC---SSEEEEETTTEEEEESCCSCSSSCEEEEEE
T ss_pred cccCCcCcceeEEeccccccCC--ceeceeecccCCCCCceeEEcCC---CCCeEEeCCCcEEEecceeecCCCcEEEEE
Confidence 3579999999966666666655 89999999988767789887532 226999999999999997622222255566
Q ss_pred EEC
Q psy9046 213 VSD 215 (215)
Q Consensus 213 a~D 215 (215)
|.|
T Consensus 106 a~D 108 (159)
T 1op4_A 106 AQD 108 (159)
T ss_dssp EEE
T ss_pred EEc
Confidence 554
No 58
>2yhg_A SDE_182CT, cellulose-binding protein; hydrolase, glycoside hydrolase; HET: BTB; 1.08A {Saccharophagus degradans}
Probab=91.89 E-value=1.1 Score=37.81 Aligned_cols=64 Identities=27% Similarity=0.353 Sum_probs=40.3
Q ss_pred EeCCCCceeEEEe--cCCC----cEEEeCCccceEEEEEEEecCCCcceeeEEEEecCCCCCeEEEEEEEEeCCCC--ce
Q psy9046 49 LDKDSSIALYVLE--QDGD----MFSVNNITVCEFQLSVDLAAADNFQSEYNATIKENSPGDTKVVLVSAEDASTP--CS 120 (215)
Q Consensus 49 ~D~D~~~~~y~i~--~~~~----~F~id~~tg~~~~~~~~~~ld~e~~~~~~~~~~e~~~~~~~~l~v~a~D~~~~--~~ 120 (215)
+|+|....+|+-. .+.+ ...|.. ......+|++++-+....+.+.++++|.+.| ++
T Consensus 365 sDPDGD~LtY~W~q~~g~g~~~~~vtls~----------------~~~~~~sft~P~~~~~~tl~f~LtVTD~~~p~lTs 428 (437)
T 2yhg_A 365 SDPDGDSLNYSWSHYGEADSYSGSVSISN----------------SSSASANVQIPSNAGGKDIHILLTLRDNGSPNLYA 428 (437)
T ss_dssp BCTTCCCEEEEEEECTTTSSCCSCCCEET----------------TTSSEEEEECCTTCTTCEEEEEEEEEECSSSCCEE
T ss_pred eCCCCCeEEEEEEEeCCCCccccceEeec----------------CCCceEEEEeCCCCCCcEEEEEEEEEeCCCCCccE
Confidence 4999888888753 2221 222322 2233444555555555667789999999844 77
Q ss_pred EEEEEEEE
Q psy9046 121 HFRVNIKV 128 (215)
Q Consensus 121 ~~~v~I~V 128 (215)
..+|.|+|
T Consensus 429 ~~rViVtV 436 (437)
T 2yhg_A 429 YRRVVINV 436 (437)
T ss_dssp EEEEEEEE
T ss_pred EeEEEEEe
Confidence 78888877
No 59
>3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A
Probab=89.88 E-value=4.6 Score=29.76 Aligned_cols=99 Identities=12% Similarity=0.003 Sum_probs=52.0
Q ss_pred CCCCeEEEEEEEEeCCCCceE-EEEEEEEeeCCCCCCccCCCceEEEEecCC-C--CCCCCEEEEEEEEeCCC-CCeEEE
Q psy9046 101 SPGDTKVVLVSAEDASTPCSH-FRVNIKVLDVNDNRPEFKSKTYRTSIQENI-I--ITPSPTLLTLEATDSDE-NPHLTY 175 (215)
Q Consensus 101 ~~~~~~~l~v~a~D~~~~~~~-~~v~I~V~DvNdn~P~f~~~~~~~~v~E~~-~--~g~~~~i~~v~a~D~D~-~~~i~y 175 (215)
.+.|.|.|+++|+|..+.... ..+.|.|.+ ..+|.. .+..+.+. . .| +..-++..|.|.|. =..+.|
T Consensus 58 ~~~G~htlta~A~D~aGn~s~s~~v~vtV~~--~~~Ptv-----~itsP~~g~~~~~~-~~vtl~~~AsD~~g~V~~Ve~ 129 (190)
T 3pdd_A 58 AAVGAYNLKAVAVLSDGRRIESPVTPVLVKV--IVKPTV-----KLTAPKSNVVAYGN-EFLKITATASDSDGKISRVDF 129 (190)
T ss_dssp CCSEEEEEEEEEEETTSCEEECCCEEEEEEC--CCCCEE-----EEEECCTTCCCBTT-SEEEEEEEEECSSSCEEEEEE
T ss_pred CCCccEEEEEEEEECCCCEeeecceeEEecc--CCCCce-----eecCCCCCcEEecC-CeEEEEEEEECCCCcEEEEEE
Confidence 345677799999998776433 357777776 336643 23333322 1 12 13446677777662 124444
Q ss_pred EEeeCCCCCcEEEcCC--eeEEEcccCCCCccEEEEEEEEEC
Q psy9046 176 KILSGNDDDVFAVDDT--GILTIQGPLAKGKTVYNLLVQVSD 215 (215)
Q Consensus 176 ~i~~~~~~~~F~Id~~--G~i~~~~~ld~~~~~y~l~V~a~D 215 (215)
.+.+ ....-+.+ -...... ..+.|.|+++|+|
T Consensus 130 ~~dg----~~v~t~t~~~y~~~~~~----~~G~~tl~a~A~D 163 (190)
T 3pdd_A 130 LVDG----EVIGSDREAPYEYEWKA----VEGNHEISVIAYD 163 (190)
T ss_dssp EETT----EEEEEECSSSEEEEEEC----CSEEEEEEEEEEE
T ss_pred EECC----EEEecccCCCEEEEEec----CCeeEEEEEEEEE
Confidence 4421 11111111 1111111 4678999998887
No 60
>2yrl_A KIAA1837 protein; PKD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=87.71 E-value=1.6 Score=28.84 Aligned_cols=31 Identities=23% Similarity=0.174 Sum_probs=25.9
Q ss_pred CCeEEEEEEEEeCCCCceEEEEEEEEeeCCC
Q psy9046 103 GDTKVVLVSAEDASTPCSHFRVNIKVLDVND 133 (215)
Q Consensus 103 ~~~~~l~v~a~D~~~~~~~~~v~I~V~DvNd 133 (215)
.|.|.+++.++|..+.+++.++.|.|...+.
T Consensus 68 ~G~y~f~LTVtD~~G~s~s~~v~VtV~~~~~ 98 (102)
T 2yrl_A 68 VGTYVFTLTVKDERNLQSQSSVNVIVKEESG 98 (102)
T ss_dssp SSEEEEEEEEEBTTCCEEEEEEEEEEECCSS
T ss_pred CeEEEEEEEEEeCCCCEEEeEEEEEEcCCCC
Confidence 4556689999999888899999999997765
No 61
>1op4_A Neural-cadherin; beta sandwich, cadherin-like domain, cell adhesion; NMR {Mus musculus} SCOP: b.1.6.1
Probab=86.88 E-value=4.3 Score=29.18 Aligned_cols=59 Identities=14% Similarity=0.079 Sum_probs=42.8
Q ss_pred CCCccCCCCCCCCCceEEEEecCCCCCcEEEEEEEEeCCCCceeEEEecCCC-cEEEeCCccceEEEE
Q psy9046 14 IPPEFEPPWTRDEPNYLLEIEEEQPIGSLLGKFTALDKDSSIALYVLEQDGD-MFSVNNITVCEFQLS 80 (215)
Q Consensus 14 ~~P~f~~~~~~~~~~~~~~V~E~~~~g~~v~~v~a~D~D~~~~~y~i~~~~~-~F~id~~tg~~~~~~ 80 (215)
+-|=| .+..|...++-+...|..+++|.-.|-.... ...+...+. .|.|+.+ |.+++.+
T Consensus 32 C~pGF------~~~~~~~~vp~~l~~g~~lgkV~F~dC~g~~-~~~~~ssDp~dFkV~~D-GtVya~r 91 (159)
T 1op4_A 32 CKTGF------PEDVYSAVLPKDVHEGQPLLNVKFSNCNRKR-KVQYESSEPADFKVDED-GTVYAVR 91 (159)
T ss_dssp CCCBC------CSCEEEECCCCSSCSSCCEEECCCBCCSSCC-CEEEECCCSSEEEEETT-TEEEEES
T ss_pred ccCCc------CcceeEEeccccccCCceeceeecccCCCCC-ceeEEcCCCCCeEEeCC-CcEEEec
Confidence 56778 6888977788888899999999888776443 333345555 8999985 6655544
No 62
>2yhg_A SDE_182CT, cellulose-binding protein; hydrolase, glycoside hydrolase; HET: BTB; 1.08A {Saccharophagus degradans}
Probab=79.16 E-value=6.3 Score=33.14 Aligned_cols=80 Identities=15% Similarity=0.203 Sum_probs=48.3
Q ss_pred eeCCCCCCccC-CCc-----eEEEEecCCCCCCCCEEEEEEE-EeCCCCCeEEEEEeeCCCC----CcEEEc-C-CeeEE
Q psy9046 129 LDVNDNRPEFK-SKT-----YRTSIQENIIITPSPTLLTLEA-TDSDENPHLTYKILSGNDD----DVFAVD-D-TGILT 195 (215)
Q Consensus 129 ~DvNdn~P~f~-~~~-----~~~~v~E~~~~g~~~~i~~v~a-~D~D~~~~i~y~i~~~~~~----~~F~Id-~-~G~i~ 195 (215)
...| ++|+.. ... ....+.++. ++.+.-.+ +|+| +..++|+...-... ....|. . ...+.
T Consensus 328 ~~aN-haPVa~iag~~g~~p~~~~v~aG~-----tVtLdAs~SsDPD-GD~LtY~W~q~~g~g~~~~~vtls~~~~~~~s 400 (437)
T 2yhg_A 328 SAAN-HHPVPVVNNDANEAVMYLNASAGS-----TVSLDASGSSDPD-GDSLNYSWSHYGEADSYSGSVSISNSSSASAN 400 (437)
T ss_dssp GGSC-CCCBCCBTTBCCSSCEEEEECTTC-----EEEEECTTCBCTT-CCCEEEEEEECTTTSSCCSCCCEETTTSSEEE
T ss_pred ccCC-CCCEEEecCCCcccccceEecCCC-----EEEEEeeeeeCCC-CCeEEEEEEEeCCCCccccceEeecCCCceEE
Confidence 3456 588876 221 144555432 23333333 3888 88999988753222 245664 3 56777
Q ss_pred EcccCCCCccEEEEEEEEEC
Q psy9046 196 IQGPLAKGKTVYNLLVQVSD 215 (215)
Q Consensus 196 ~~~~ld~~~~~y~l~V~a~D 215 (215)
+..+-......|.|.++++|
T Consensus 401 ft~P~~~~~~tl~f~LtVTD 420 (437)
T 2yhg_A 401 VQIPSNAGGKDIHILLTLRD 420 (437)
T ss_dssp EECCTTCTTCEEEEEEEEEE
T ss_pred EEeCCCCCCcEEEEEEEEEe
Confidence 77666656778999999987
No 63
>2y72_A Collagenase, collagenase G; polycystic kidney disease domain, beta barrel, collagen RECO domain, hydrolase; 1.18A {Clostridium histolyticum} PDB: 3jqu_A 3js7_A
Probab=78.15 E-value=4.8 Score=25.33 Aligned_cols=28 Identities=14% Similarity=0.108 Sum_probs=21.5
Q ss_pred CCCeEEEEEEEEeCCCCceEEEEEEEEe
Q psy9046 102 PGDTKVVLVSAEDASTPCSHFRVNIKVL 129 (215)
Q Consensus 102 ~~~~~~l~v~a~D~~~~~~~~~v~I~V~ 129 (215)
..|.|.+++.++|..+...+.++.|.|.
T Consensus 57 ~~G~Y~v~LtVtd~~G~~~t~~~~V~V~ 84 (85)
T 2y72_A 57 KAGTYNVTLKVTDDKGATATESFTIEIK 84 (85)
T ss_dssp SCEEEEEEEEEEETTSCEEEEEEEEEEE
T ss_pred CCeEEEEEEEEEECCCCEEEEEEEEEEc
Confidence 3455558999999887777888888875
No 64
>3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A
Probab=77.55 E-value=18 Score=26.43 Aligned_cols=70 Identities=23% Similarity=0.164 Sum_probs=39.1
Q ss_pred cEEEEEEEEeCCCCceeEEEecCCCcEEEeCCccceEEEEEEEecCCCcceeeEEEEecCCCCCeEEEEEEEEeCCCC-c
Q psy9046 41 SLLGKFTALDKDSSIALYVLEQDGDMFSVNNITVCEFQLSVDLAAADNFQSEYNATIKENSPGDTKVVLVSAEDASTP-C 119 (215)
Q Consensus 41 ~~v~~v~a~D~D~~~~~y~i~~~~~~F~id~~tg~~~~~~~~~~ld~e~~~~~~~~~~e~~~~~~~~l~v~a~D~~~~-~ 119 (215)
.+-....|.|.|.+..++.+--++....-+ ....|.+.... +.|.|.|+++|+|..+. +
T Consensus 110 ~vtl~~~AsD~~g~V~~Ve~~~dg~~v~t~------------------t~~~y~~~~~~--~~G~~tl~a~A~D~aGn~s 169 (190)
T 3pdd_A 110 FLKITATASDSDGKISRVDFLVDGEVIGSD------------------REAPYEYEWKA--VEGNHEISVIAYDDDDAAS 169 (190)
T ss_dssp EEEEEEEEECSSSCEEEEEEEETTEEEEEE------------------CSSSEEEEEEC--CSEEEEEEEEEEETTCCBC
T ss_pred eEEEEEEEECCCCcEEEEEEEECCEEEecc------------------cCCCEEEEEec--CCeeEEEEEEEEECCCCEE
Confidence 345667788877655555542222111111 11234433333 56778899999998765 4
Q ss_pred eEEEEEEEEee
Q psy9046 120 SHFRVNIKVLD 130 (215)
Q Consensus 120 ~~~~v~I~V~D 130 (215)
....|.|+|.+
T Consensus 170 ~s~~vtvtv~~ 180 (190)
T 3pdd_A 170 TPDSVKIFVKQ 180 (190)
T ss_dssp CCEEEEEEEBC
T ss_pred ecceEEEEECC
Confidence 45667776654
No 65
>2kpn_A Bacillolysin; solution structure, BIG_3 domain, PF07523, PSI BIG-open NESG, cell WALL, hydrolase, peptidoglycan-anchor; NMR {Bacillus cereus atcc 14579}
Probab=75.87 E-value=9 Score=25.32 Aligned_cols=29 Identities=7% Similarity=0.031 Sum_probs=23.4
Q ss_pred EEEEEEeCCCCceEEEEEEEEeeCCCCCC
Q psy9046 108 VLVSAEDASTPCSHFRVNIKVLDVNDNRP 136 (215)
Q Consensus 108 l~v~a~D~~~~~~~~~v~I~V~DvNdn~P 136 (215)
++..++|..+...+++.+|.|.+..+..|
T Consensus 63 VtY~VtDs~Gn~~t~trtVtV~~~~e~~~ 91 (103)
T 2kpn_A 63 LTYTVTDSKGHEVTAKQTVTVKVREEVKN 91 (103)
T ss_dssp EEEEEECTTSCEEEEEEEEEEECSSCCCC
T ss_pred EEEEEEcCCCCEEEEEEEEEEeCCCcccC
Confidence 78999998887888889999988665433
No 66
>3rb5_A Na/Ca exchange protein; CBD12, calcium binding and regulation, metal binding protein; 2.35A {Drosophila melanogaster} PDB: 3rb7_A 3e9u_A
Probab=75.86 E-value=28 Score=27.59 Aligned_cols=54 Identities=15% Similarity=0.130 Sum_probs=33.4
Q ss_pred EEEEEEeeCCCCCCccCCCceEEEEecCCCCCCCCEEEEEEEEeCCC-CCeEEEEEeeCC
Q psy9046 123 RVNIKVLDVNDNRPEFKSKTYRTSIQENIIITPSPTLLTLEATDSDE-NPHLTYKILSGN 181 (215)
Q Consensus 123 ~v~I~V~DvNdn~P~f~~~~~~~~v~E~~~~g~~~~i~~v~a~D~D~-~~~i~y~i~~~~ 181 (215)
..+|+|.| ||++|.|.-..-...|.|+. | ...+.|.-+-.-. .-.+.|+...|.
T Consensus 111 ~atvtI~d-dD~~g~~~f~~~~~~V~E~~--g--~~~~~V~Rs~~~~g~vtV~~~T~dGT 165 (298)
T 3rb5_A 111 IATVMILD-DDHAGIFAFTDSVFEITESV--G--RFELKVMRYSGARGTVIVPYWTENDT 165 (298)
T ss_dssp EEEEEEEC-CCCCCEEECSCSEEEECTTC--C--CEEEEEEEESCCCSCEEEEEEEEEC-
T ss_pred eEEEEEec-cccccccccccccEEeecCC--c--eEEEEEEEEecCCCCEEEEEEecCCc
Confidence 45556666 57788876544467889985 3 5666665544332 346788876653
No 67
>3pe9_A Fibronectin(III)-like module; CBHA, beta-sandwich, cellulosome, unknown function; 1.69A {Clostridium thermocellum}
Probab=63.83 E-value=27 Score=22.65 Aligned_cols=28 Identities=21% Similarity=0.108 Sum_probs=21.4
Q ss_pred CCeEEEEEEEEeCCCC-ceEEEEEEEEee
Q psy9046 103 GDTKVVLVSAEDASTP-CSHFRVNIKVLD 130 (215)
Q Consensus 103 ~~~~~l~v~a~D~~~~-~~~~~v~I~V~D 130 (215)
.|.|.|.++|+|..+. .....|.|.|.+
T Consensus 60 ~G~htl~a~AtD~~G~~~tS~~v~vtV~~ 88 (98)
T 3pe9_A 60 EGNHEISVIAYDDDDAASTPDSVKIFVKQ 88 (98)
T ss_dssp SEEEEEEEEEEETTCCBCCCEEEEEEEEC
T ss_pred CccEEEEEEEEECCCCEEeeeEEEEEECc
Confidence 5888899999998765 446677777764
No 68
>3rb5_A Na/Ca exchange protein; CBD12, calcium binding and regulation, metal binding protein; 2.35A {Drosophila melanogaster} PDB: 3rb7_A 3e9u_A
Probab=46.19 E-value=77 Score=25.00 Aligned_cols=28 Identities=11% Similarity=0.260 Sum_probs=14.5
Q ss_pred CCceEEEEecC---CCCCcE-EEEEEEEeCCC
Q psy9046 26 EPNYLLEIEEE---QPIGSL-LGKFTALDKDS 53 (215)
Q Consensus 26 ~~~~~~~V~E~---~~~g~~-v~~v~a~D~D~ 53 (215)
...+.+.+..- +.+|.. .+++...|.|.
T Consensus 90 dEtF~v~Ls~p~~~a~lg~~~~atvtI~ddD~ 121 (298)
T 3rb5_A 90 DECFYIRLFNPSEGVKLAVPMIATVMILDDDH 121 (298)
T ss_dssp CEEEEEEEECCCTTCCBCSCSEEEEEEECCCC
T ss_pred cEEEEEEEeCCCCCcEECCCceEEEEEecccc
Confidence 34455555532 233433 46666667665
No 69
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=40.45 E-value=69 Score=20.34 Aligned_cols=21 Identities=19% Similarity=0.241 Sum_probs=12.7
Q ss_pred EEEEEeCCCCceEEEEEEEEee
Q psy9046 109 LVSAEDASTPCSHFRVNIKVLD 130 (215)
Q Consensus 109 ~v~a~D~~~~~~~~~v~I~V~D 130 (215)
++.|....+ ...+.+.+.|.+
T Consensus 85 ~C~a~N~~G-~~~~~~~l~V~~ 105 (107)
T 3knb_B 85 VCRARNAAG-EAYAAAAVTVLE 105 (107)
T ss_dssp EEEEEETTE-EEEEEEEEEEEC
T ss_pred EEEEEECCC-EEEEEEEEEEEc
Confidence 367776544 456666776664
No 70
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=36.06 E-value=78 Score=19.69 Aligned_cols=20 Identities=20% Similarity=0.192 Sum_probs=12.8
Q ss_pred EEEEeCCCCceEEEEEEEEee
Q psy9046 110 VSAEDASTPCSHFRVNIKVLD 130 (215)
Q Consensus 110 v~a~D~~~~~~~~~v~I~V~D 130 (215)
+.|+...+ ..++.+.+.|..
T Consensus 80 C~a~N~~G-~~~~~~~l~V~~ 99 (100)
T 3knb_A 80 LSLGNEFG-SDSATVNIHIRS 99 (100)
T ss_dssp EEEEETTE-EEEEEEEEEEEC
T ss_pred EEEEECCC-EEEEEEEEEEEE
Confidence 67776544 566677777654
No 71
>1b4r_A Protein (PKD1_human); PKD domain 1 from human polycystein-1, polycystin (precursor), membrane protein; NMR {Homo sapiens} SCOP: b.1.3.1
Probab=35.07 E-value=79 Score=19.56 Aligned_cols=27 Identities=7% Similarity=-0.045 Sum_probs=17.5
Q ss_pred CCCeEEEEEEEEeCCCCceEEEEEEEEe
Q psy9046 102 PGDTKVVLVSAEDASTPCSHFRVNIKVL 129 (215)
Q Consensus 102 ~~~~~~l~v~a~D~~~~~~~~~v~I~V~ 129 (215)
..|.|.+++.++++.. +..+...|+|.
T Consensus 53 ~~G~YtV~Ltv~~g~~-~~~a~~~V~V~ 79 (80)
T 1b4r_A 53 LPGRYHVTAVLALGAG-SALLGTDVQVE 79 (80)
T ss_dssp SSEEEEEEEEEECSSC-EEEEEEEEEEB
T ss_pred CCcEEEEEEEEEeCCc-eEEEEEEEEEE
Confidence 3455668888885544 66766776663
No 72
>2c4x_A Endoglucanase, ctcel9D-CEL44A; cellulase ctcel9D-CEL44A, PKD domain, CBM44, carbohydrate BI module, beta-sandwich proteins, cellulosome; 2.0A {Clostridium thermocellum} PDB: 2c26_A
Probab=32.59 E-value=72 Score=24.66 Aligned_cols=31 Identities=26% Similarity=0.231 Sum_probs=23.5
Q ss_pred CCCeEEEEEEEEeCCCCceEEEEEEEEeeCC
Q psy9046 102 PGDTKVVLVSAEDASTPCSHFRVNIKVLDVN 132 (215)
Q Consensus 102 ~~~~~~l~v~a~D~~~~~~~~~v~I~V~DvN 132 (215)
..|.|.+++.++|..+.+.+.+..|.|....
T Consensus 67 ~~GtYtVtLTVtD~~G~s~t~t~~ItV~~~~ 97 (260)
T 2c4x_A 67 NPGTYKVKLIVTDNQGASSSFTATIKVTSAT 97 (260)
T ss_dssp SCEEEEEEEEEEETTSCEEEEEEEEEEBCSS
T ss_pred CCEEEEEEEEEEeCCCCeEEEEEEEEECCCC
Confidence 3455558999999887677888888888653
No 73
>2kzw_A Uncharacterized protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Methanosarcina mazei}
Probab=26.96 E-value=1.1e+02 Score=21.28 Aligned_cols=30 Identities=13% Similarity=0.163 Sum_probs=22.4
Q ss_pred CCCCeEEEEEEEEeCCCCceEEEEEEEEeeC
Q psy9046 101 SPGDTKVVLVSAEDASTPCSHFRVNIKVLDV 131 (215)
Q Consensus 101 ~~~~~~~l~v~a~D~~~~~~~~~v~I~V~Dv 131 (215)
...|.|.+++.++|..+ ....+..+.|+.-
T Consensus 111 ~~~G~YtVtLtvtn~~G-~~~~t~~~~i~~~ 140 (145)
T 2kzw_A 111 FNEGEYIVSLIVSNEND-SDSASVTIRALEH 140 (145)
T ss_dssp SSCEEEEEEEEEECSSC-EEEEEEEEEEECT
T ss_pred CCCcEEEEEEEEEcCCC-CeeEEEeeeeeec
Confidence 35577889999999876 5677777777753
No 74
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=26.45 E-value=68 Score=28.55 Aligned_cols=37 Identities=27% Similarity=0.205 Sum_probs=25.0
Q ss_pred CCCCCeEEEEEEEEeCCCC--ceEEEEEEEEeeCCCCCCccCCC
Q psy9046 100 NSPGDTKVVLVSAEDASTP--CSHFRVNIKVLDVNDNRPEFKSK 141 (215)
Q Consensus 100 ~~~~~~~~l~v~a~D~~~~--~~~~~v~I~V~DvNdn~P~f~~~ 141 (215)
+.++|.|.|.|+|++..+. ...+++.|+|. ||-+..+
T Consensus 750 nL~pG~Y~f~V~a~n~~g~w~~~~~~l~i~I~-----Ppww~t~ 788 (795)
T 4a2l_A 750 NLPQGTYQFLVKAANSDGKWNPIPTALEIIVL-----PIWYKTL 788 (795)
T ss_dssp CCCSEEEEEEEEEECTTSCBCSSCEEEEEEEC-----CCC----
T ss_pred ccCCCeEEEEEEEECCCCccCCCceEEEEEEE-----CCcccCc
Confidence 5677899999999987654 34567788775 7766544
No 75
>2xwx_A GBPA, glcnac-binding protein A; chitin-binding protein; 1.80A {Vibrio cholerae}
Probab=25.18 E-value=2.9e+02 Score=22.74 Aligned_cols=20 Identities=5% Similarity=0.160 Sum_probs=14.6
Q ss_pred cCCCCCeEEEEEEEEeCCCC
Q psy9046 99 ENSPGDTKVVLVSAEDASTP 118 (215)
Q Consensus 99 e~~~~~~~~l~v~a~D~~~~ 118 (215)
.+...|.|.|.|.+++..+.
T Consensus 359 s~~~aGhh~lvv~~~~~~G~ 378 (391)
T 2xwx_A 359 SEAKAGHHMLVSRIKDRDGN 378 (391)
T ss_dssp SCCCSEEEEEEEEEEETTCC
T ss_pred cCCCCccEEEEEEEECCCCc
Confidence 45566888888998876553
No 76
>3ead_A Na/Ca exchange protein; CBD1, calcium regulation, membrane, transmembrane, membrane; 2.25A {Drosophila melanogaster} SCOP: b.1.27.0
Probab=22.28 E-value=1.9e+02 Score=19.58 Aligned_cols=29 Identities=28% Similarity=0.239 Sum_probs=5.2
Q ss_pred eEEEEEEEEeeCCCCCCccCCCceEEEEecCC
Q psy9046 120 SHFRVNIKVLDVNDNRPEFKSKTYRTSIQENI 151 (215)
Q Consensus 120 ~~~~v~I~V~DvNdn~P~f~~~~~~~~v~E~~ 151 (215)
..++|+| +| +|.+|.|.-..-...|.|+.
T Consensus 105 ~~atvtI--~d-dD~~g~~~f~~~~~~V~E~~ 133 (137)
T 3ead_A 105 MIATVMI--LD-DDHAGIFAFTDSVFEITESV 133 (137)
T ss_dssp SEEEEEE--EC-CC------------------
T ss_pred cEEEEEE--EC-CCCCCEEEECCCcEEEeccc
Confidence 3444444 44 36678765544455666654
No 77
>2e7m_A Protein KIAA0319; PKD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.14 E-value=55 Score=21.88 Aligned_cols=28 Identities=18% Similarity=0.062 Sum_probs=18.7
Q ss_pred CCCeEEEEEEEEeCCCCceEEEEEEEEee
Q psy9046 102 PGDTKVVLVSAEDASTPCSHFRVNIKVLD 130 (215)
Q Consensus 102 ~~~~~~l~v~a~D~~~~~~~~~v~I~V~D 130 (215)
..|.|.+.|.++|... .....+.|+|+-
T Consensus 78 ~eG~Y~FqltVtd~~~-~ge~~vnVTV~P 105 (113)
T 2e7m_A 78 SVGLYVFKVTVSSENA-FGEGFVNVTVKP 105 (113)
T ss_dssp CSEEEEECCEEEETTE-EEECCEEEEEEC
T ss_pred CcEEEEEEEEEECCCC-CccceEEEEEcC
Confidence 4466667889898876 455566666654
No 78
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=21.55 E-value=71 Score=28.26 Aligned_cols=36 Identities=17% Similarity=0.212 Sum_probs=26.0
Q ss_pred cCCCCCeEEEEEEEEeCCCC--ceEEEEEEEEeeCCCCCCccC
Q psy9046 99 ENSPGDTKVVLVSAEDASTP--CSHFRVNIKVLDVNDNRPEFK 139 (215)
Q Consensus 99 e~~~~~~~~l~v~a~D~~~~--~~~~~v~I~V~DvNdn~P~f~ 139 (215)
-+.++|.|.|.|+|++..+. ...+++.|+|. ||..+
T Consensus 715 tnL~pG~Y~f~V~a~~~~g~w~~~~~~l~I~I~-----Pp~~~ 752 (758)
T 3ott_A 715 SNLSYGNYQLIISKLERDGQPSNRPHILNIRIL-----PPWLE 752 (758)
T ss_dssp CSCCSEEEEEEEEEBCTTSCBCSSCEEEEEEEC-----CGGGG
T ss_pred cCCCCccEEEEEEEeCCCCCccCccEEEEEEEC-----Ccchh
Confidence 45677999999999987654 34567778776 66544
Done!