BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9047
(110 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|340725229|ref|XP_003400975.1| PREDICTED: protocadherin Fat 3-like [Bombus terrestris]
Length = 1961
Score = 166 bits (421), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 85/129 (65%), Positives = 96/129 (74%), Gaps = 19/129 (14%)
Query: 1 LTCTVKVSNRKRTIPVIVRVSD-------------------LTPVGSTIFKNLRAVDADA 41
L+CTVK +N+KRTIPVIVRVSD LTPVGSTIFKN+ AVDADA
Sbjct: 109 LSCTVKQTNKKRTIPVIVRVSDINDNAPKFINTPYETTVPELTPVGSTIFKNVVAVDADA 168
Query: 42 GVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQ 101
GVNG+VEY I P IG DGVG++R+T DGY YFSINLPHQGQVTVNR+LDFE+TQ
Sbjct: 169 GVNGIVEYSIAPGDGTGIGNNDGVGRNRITTADGYGYFSINLPHQGQVTVNRTLDFERTQ 228
Query: 102 RYLVTIVAS 110
RYLVTI+AS
Sbjct: 229 RYLVTILAS 237
>gi|350403960|ref|XP_003486964.1| PREDICTED: protocadherin Fat 3-like [Bombus impatiens]
Length = 1968
Score = 166 bits (421), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 85/129 (65%), Positives = 96/129 (74%), Gaps = 19/129 (14%)
Query: 1 LTCTVKVSNRKRTIPVIVRVSD-------------------LTPVGSTIFKNLRAVDADA 41
L+CTVK +N+KRTIPVIVRVSD LTPVGSTIFKN+ AVDADA
Sbjct: 109 LSCTVKQTNKKRTIPVIVRVSDINDNAPKFINTPYETTVPELTPVGSTIFKNVVAVDADA 168
Query: 42 GVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQ 101
GVNG+VEY I P IG DGVG++R+T DGY YFSINLPHQGQVTVNR+LDFE+TQ
Sbjct: 169 GVNGIVEYSIAPGDGTGIGNNDGVGRNRITTADGYGYFSINLPHQGQVTVNRTLDFERTQ 228
Query: 102 RYLVTIVAS 110
RYLVTI+AS
Sbjct: 229 RYLVTILAS 237
>gi|380016357|ref|XP_003692153.1| PREDICTED: protocadherin-15-like [Apis florea]
Length = 1841
Score = 166 bits (420), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 85/129 (65%), Positives = 96/129 (74%), Gaps = 19/129 (14%)
Query: 1 LTCTVKVSNRKRTIPVIVRVSD-------------------LTPVGSTIFKNLRAVDADA 41
L+CTVK +N+KRTIPVIVRVSD LTPVGSTIFKN+ AVDADA
Sbjct: 111 LSCTVKQTNKKRTIPVIVRVSDINDNAPKFINTPYETTVPELTPVGSTIFKNVVAVDADA 170
Query: 42 GVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQ 101
GVNG+VEY I P IG DGVG++R+T DGY YFSINLPHQGQVTVNR+LDFE+TQ
Sbjct: 171 GVNGIVEYSIAPGDGTGIGNNDGVGRNRITTADGYGYFSINLPHQGQVTVNRTLDFERTQ 230
Query: 102 RYLVTIVAS 110
RYLVTI+AS
Sbjct: 231 RYLVTILAS 239
>gi|328783691|ref|XP_396248.4| PREDICTED: protocadherin-15 [Apis mellifera]
Length = 1974
Score = 166 bits (420), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 85/129 (65%), Positives = 96/129 (74%), Gaps = 19/129 (14%)
Query: 1 LTCTVKVSNRKRTIPVIVRVSD-------------------LTPVGSTIFKNLRAVDADA 41
L+CTVK +N+KRTIPVIVRVSD LTPVGSTIFKN+ AVDADA
Sbjct: 110 LSCTVKQTNKKRTIPVIVRVSDINDNAPKFINTPYETTVPELTPVGSTIFKNVVAVDADA 169
Query: 42 GVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQ 101
GVNG+VEY I P IG DGVG++R+T DGY YFSINLPHQGQVTVNR+LDFE+TQ
Sbjct: 170 GVNGIVEYSIAPGDGTGIGNNDGVGRNRITTADGYGYFSINLPHQGQVTVNRTLDFERTQ 229
Query: 102 RYLVTIVAS 110
RYLVTI+AS
Sbjct: 230 RYLVTILAS 238
>gi|383865554|ref|XP_003708238.1| PREDICTED: cadherin-87A-like, partial [Megachile rotundata]
Length = 1434
Score = 166 bits (420), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 85/129 (65%), Positives = 96/129 (74%), Gaps = 19/129 (14%)
Query: 1 LTCTVKVSNRKRTIPVIVRVSD-------------------LTPVGSTIFKNLRAVDADA 41
L+CTVK +N+KRTIPVIVRVSD LTPVGSTIFKN+ AVDADA
Sbjct: 63 LSCTVKQTNKKRTIPVIVRVSDINDNKPKFINTPYETTVPELTPVGSTIFKNVVAVDADA 122
Query: 42 GVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQ 101
GVNG+VEY I P IG +GVG++R+T DGY YFSINLPHQGQVTVNR+LDFEKTQ
Sbjct: 123 GVNGIVEYSIAPGDGSRIGNNEGVGRNRITTADGYGYFSINLPHQGQVTVNRTLDFEKTQ 182
Query: 102 RYLVTIVAS 110
RYLVTI+AS
Sbjct: 183 RYLVTILAS 191
>gi|307175879|gb|EFN65694.1| Protocadherin-21 [Camponotus floridanus]
Length = 389
Score = 165 bits (418), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 83/129 (64%), Positives = 97/129 (75%), Gaps = 19/129 (14%)
Query: 1 LTCTVKVSNRKRTIPVIVRVSD-------------------LTPVGSTIFKNLRAVDADA 41
L+CTVK +N+KRTIPVIVRVSD LTPVGSTIFKN+ AVDADA
Sbjct: 218 LSCTVKSTNKKRTIPVIVRVSDINDNAPKFINTPYETTVPELTPVGSTIFKNVDAVDADA 277
Query: 42 GVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQ 101
GVNG+VEY I P IG+ +GVG++R+T DGY YFSINLPHQGQVTVNR+LD+E+TQ
Sbjct: 278 GVNGIVEYSIAPGDGSRIGSNEGVGRNRITTADGYGYFSINLPHQGQVTVNRTLDYERTQ 337
Query: 102 RYLVTIVAS 110
RYLVTI+AS
Sbjct: 338 RYLVTILAS 346
>gi|242023771|ref|XP_002432304.1| protocadherin-15 precursor, putative [Pediculus humanus corporis]
gi|212517727|gb|EEB19566.1| protocadherin-15 precursor, putative [Pediculus humanus corporis]
Length = 1512
Score = 164 bits (415), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 85/129 (65%), Positives = 98/129 (75%), Gaps = 19/129 (14%)
Query: 1 LTCTVKVSNRKRTIPVIVRVSD-------------------LTPVGSTIFKNLRAVDADA 41
LTC+VK N+KRTIPVIVRVSD LTPVG+TI++N+ A D+DA
Sbjct: 91 LTCSVKNKNKKRTIPVIVRVSDINDNAPHFINTPYETTVSELTPVGTTIYQNILAKDSDA 150
Query: 42 GVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQ 101
GVNGLVEY IVP KN+ T +GVG++R+TV DGY YFSINLPHQGQVTVNRSLD+EKTQ
Sbjct: 151 GVNGLVEYSIVPGDGKNLITTNGVGRNRITVGDGYGYFSINLPHQGQVTVNRSLDYEKTQ 210
Query: 102 RYLVTIVAS 110
RYLVTIVAS
Sbjct: 211 RYLVTIVAS 219
>gi|332022271|gb|EGI62586.1| Cadherin-23 [Acromyrmex echinatior]
Length = 210
Score = 163 bits (413), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 82/129 (63%), Positives = 98/129 (75%), Gaps = 19/129 (14%)
Query: 1 LTCTVKVSNRKRTIPVIVRVSD-------------------LTPVGSTIFKNLRAVDADA 41
L+CTVK++N+KRTIP+IVRVSD LTPVGSTIFKN+ A DADA
Sbjct: 76 LSCTVKLTNKKRTIPMIVRVSDINDNAPKFINTPYETTVPELTPVGSTIFKNVDAKDADA 135
Query: 42 GVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQ 101
GVNG+VEY I P IG+ +GVG++R+T VDGY YFSINLPHQGQVTVNR+LD+E+TQ
Sbjct: 136 GVNGIVEYSIAPGDGSRIGSNEGVGRNRITTVDGYGYFSINLPHQGQVTVNRTLDYERTQ 195
Query: 102 RYLVTIVAS 110
RYLVTI+AS
Sbjct: 196 RYLVTILAS 204
>gi|307191988|gb|EFN75378.1| Protocadherin beta-9 [Harpegnathos saltator]
Length = 265
Score = 159 bits (402), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/129 (61%), Positives = 92/129 (71%), Gaps = 19/129 (14%)
Query: 1 LTCTVKVSNRKRTIPVIVRVSD-------------------LTPVGSTIFKNLRAVDADA 41
L CTV+ + +KR IP+IVRVSD LTPVGSTIFKN+ A DADA
Sbjct: 122 LICTVRSTGKKRQIPMIVRVSDINDNAPKFINTPYETTVPELTPVGSTIFKNVEAADADA 181
Query: 42 GVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQ 101
GVNG+VEY I P IG +GVG+DR+T DGY YFSINLPHQGQVTVNR+LD+E+TQ
Sbjct: 182 GVNGIVEYSIAPGDSSMIGGNEGVGRDRITTADGYGYFSINLPHQGQVTVNRTLDYERTQ 241
Query: 102 RYLVTIVAS 110
RYLVTI+AS
Sbjct: 242 RYLVTILAS 250
>gi|345486640|ref|XP_003425515.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-15-like [Nasonia
vitripennis]
Length = 1618
Score = 158 bits (400), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 80/129 (62%), Positives = 91/129 (70%), Gaps = 19/129 (14%)
Query: 1 LTCTVKVSNRKRTIPVIVRVSD-------------------LTPVGSTIFKNLRAVDADA 41
L+CTV+ + R IPVIVRVSD LTPVGSTIFKN+ A DADA
Sbjct: 148 LSCTVRATRSNRKIPVIVRVSDVNDNAPKFINTPYETTVPELTPVGSTIFKNVVATDADA 207
Query: 42 GVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQ 101
GVNGLVEY I P IG +DGVG+DR+T DGY YFSINLPHQGQVTVNR+LD+E+TQ
Sbjct: 208 GVNGLVEYSIAPGDGTGIGNSDGVGRDRITTADGYGYFSINLPHQGQVTVNRTLDYERTQ 267
Query: 102 RYLVTIVAS 110
RY VTI+AS
Sbjct: 268 RYFVTILAS 276
>gi|322786582|gb|EFZ12977.1| hypothetical protein SINV_02902 [Solenopsis invicta]
Length = 191
Score = 157 bits (396), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 82/129 (63%), Positives = 96/129 (74%), Gaps = 22/129 (17%)
Query: 1 LTCTVKVSNRKRTIPVIVRVSD-------------------LTPVGSTIFKNLRAVDADA 41
L+CTVK +N+KRTIPVIVRVSD LTPVGSTIFKN+ A+DADA
Sbjct: 66 LSCTVKSTNKKRTIPVIVRVSDINDNAPKFINTPYETTVPELTPVGSTIFKNVDAIDADA 125
Query: 42 GVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQ 101
GVNG+VEY I P I +GVG++R+T VDGY YFSINLPHQGQVTVNR+LD+E+TQ
Sbjct: 126 GVNGIVEYSIAPGDGSRI---EGVGRNRITTVDGYGYFSINLPHQGQVTVNRTLDYERTQ 182
Query: 102 RYLVTIVAS 110
RYLVTI+AS
Sbjct: 183 RYLVTILAS 191
>gi|270001289|gb|EEZ97736.1| protocadherin 15 [Tribolium castaneum]
Length = 1539
Score = 131 bits (330), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 70/129 (54%), Positives = 89/129 (68%), Gaps = 24/129 (18%)
Query: 1 LTCTVKVSNRKRTIPVIVRVSD-------------------LTPVGSTIFKNLRAVDADA 41
L CT+K +++KRT+PVIVR+SD LTPVG+TIF+++ A D DA
Sbjct: 109 LICTIKSTHKKRTVPVIVRLSDINDNAPEFVNTPYETSISELTPVGTTIFQDILAKDKDA 168
Query: 42 GVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQ 101
GVNGLVEY IV + +N+ D DR+ DG+ YF+INLPHQGQVTVNR+LDFEKTQ
Sbjct: 169 GVNGLVEYSIV--KGENLAHED---DDRIHSEDGFGYFAINLPHQGQVTVNRTLDFEKTQ 223
Query: 102 RYLVTIVAS 110
RY VT+VA+
Sbjct: 224 RYYVTVVAT 232
>gi|91091750|ref|XP_968422.1| PREDICTED: similar to cadherin [Tribolium castaneum]
Length = 1516
Score = 131 bits (330), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 70/129 (54%), Positives = 89/129 (68%), Gaps = 24/129 (18%)
Query: 1 LTCTVKVSNRKRTIPVIVRVSD-------------------LTPVGSTIFKNLRAVDADA 41
L CT+K +++KRT+PVIVR+SD LTPVG+TIF+++ A D DA
Sbjct: 86 LICTIKSTHKKRTVPVIVRLSDINDNAPEFVNTPYETSISELTPVGTTIFQDILAKDKDA 145
Query: 42 GVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQ 101
GVNGLVEY IV + +N+ D DR+ DG+ YF+INLPHQGQVTVNR+LDFEKTQ
Sbjct: 146 GVNGLVEYSIV--KGENLAHED---DDRIHSEDGFGYFAINLPHQGQVTVNRTLDFEKTQ 200
Query: 102 RYLVTIVAS 110
RY VT+VA+
Sbjct: 201 RYYVTVVAT 209
>gi|357620011|gb|EHJ72353.1| putative cadherin [Danaus plexippus]
Length = 622
Score = 131 bits (329), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 68/129 (52%), Positives = 83/129 (64%), Gaps = 27/129 (20%)
Query: 1 LTCTVKVSNRKRTIPVIVRVSD-------------------LTPVGSTIFKNLRAVDADA 41
L C VK + ++RTIPVIVRVSD L P+GSTIF +RA+D DA
Sbjct: 110 LVCQVKATKKRRTIPVIVRVSDINDNAPVFQGTPYETSISELIPIGSTIFDGIRALDPDA 169
Query: 42 GVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQ 101
GVNGL EYFI+P +K + A+ DGY+ F I +PHQGQVTVNRSLD+E+TQ
Sbjct: 170 GVNGLAEYFIIPGDNKTLEAANAA--------DGYTNFEIPIPHQGQVTVNRSLDYERTQ 221
Query: 102 RYLVTIVAS 110
+YLVTIVAS
Sbjct: 222 KYLVTIVAS 230
>gi|195159268|ref|XP_002020504.1| GL14030 [Drosophila persimilis]
gi|194117273|gb|EDW39316.1| GL14030 [Drosophila persimilis]
Length = 576
Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/129 (50%), Positives = 88/129 (68%), Gaps = 25/129 (19%)
Query: 1 LTCTVKVSNRKRTIPVIVRVSDL-------------------TPVGSTIFKNLRAVDADA 41
++CT++ SN+KR IP+IVRVSD+ TPVG+TIF+N++A+D DA
Sbjct: 113 VSCTIRSSNKKRNIPIIVRVSDINDNAPRFMNTPYEVTVPESTPVGTTIFRNIQALDKDA 172
Query: 42 GVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQ 101
GVNGLVEYFI ++NI + +++T DGY F+I+ PHQGQVTV++ LD+EK Q
Sbjct: 173 GVNGLVEYFIA---EQNINATE---DEKLTSADGYGTFAISFPHQGQVTVSKILDYEKVQ 226
Query: 102 RYLVTIVAS 110
RY VTIVAS
Sbjct: 227 RYFVTIVAS 235
>gi|195444020|ref|XP_002069681.1| GK11655 [Drosophila willistoni]
gi|194165766|gb|EDW80667.1| GK11655 [Drosophila willistoni]
Length = 1731
Score = 125 bits (315), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 63/129 (48%), Positives = 86/129 (66%), Gaps = 25/129 (19%)
Query: 1 LTCTVKVSNRKRTIPVIVRVSDL-------------------TPVGSTIFKNLRAVDADA 41
++CTV+ +N+KR IP+IVRVSD+ TPVG+TIF+N++A+D DA
Sbjct: 113 VSCTVRTTNKKRNIPIIVRVSDINDNAPRFMNTPYEVTVPESTPVGTTIFRNIQALDKDA 172
Query: 42 GVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQ 101
GVNGLVEYFI G+ + +++T DGY F+I+ PHQGQVTV ++LD+EK Q
Sbjct: 173 GVNGLVEYFIAE------GSTNATEDEKLTSADGYGTFAISFPHQGQVTVAKTLDYEKIQ 226
Query: 102 RYLVTIVAS 110
RY +TIVAS
Sbjct: 227 RYYLTIVAS 235
>gi|125772752|ref|XP_001357648.1| GA15934 [Drosophila pseudoobscura pseudoobscura]
gi|54637380|gb|EAL26782.1| GA15934 [Drosophila pseudoobscura pseudoobscura]
Length = 1722
Score = 124 bits (311), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 64/129 (49%), Positives = 88/129 (68%), Gaps = 25/129 (19%)
Query: 1 LTCTVKVSNRKRTIPVIVRVSDL-------------------TPVGSTIFKNLRAVDADA 41
++CT++ SN+KR IP+IVRVSD+ TPVG+TIF+N++A+D DA
Sbjct: 113 VSCTIRSSNKKRNIPIIVRVSDINDNAPRFMNTPYEVTVPESTPVGTTIFRNIQALDKDA 172
Query: 42 GVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQ 101
GVNGLVEYFI +++I + +++T DGY F+I+ PHQGQVTV++ LD+EK Q
Sbjct: 173 GVNGLVEYFIA---EQSINATE---DEKLTSADGYGTFAISFPHQGQVTVSKILDYEKVQ 226
Query: 102 RYLVTIVAS 110
RY VTIVAS
Sbjct: 227 RYFVTIVAS 235
>gi|225581190|gb|ACN94758.1| GA15934 [Drosophila miranda]
Length = 1722
Score = 124 bits (311), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 64/129 (49%), Positives = 88/129 (68%), Gaps = 25/129 (19%)
Query: 1 LTCTVKVSNRKRTIPVIVRVSDL-------------------TPVGSTIFKNLRAVDADA 41
++CT++ SN+KR IP+IVRVSD+ TPVG+TIF+N++A+D DA
Sbjct: 113 VSCTIRSSNKKRNIPIIVRVSDINDNAPRFMNTPYEVTVPESTPVGTTIFRNIQALDKDA 172
Query: 42 GVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQ 101
GVNGLVEYFI +++I + +++T DGY F+I+ PHQGQVTV++ LD+EK Q
Sbjct: 173 GVNGLVEYFIA---EQSINATE---DEKLTSADGYGTFAISFPHQGQVTVSKILDYEKVQ 226
Query: 102 RYLVTIVAS 110
RY VTIVAS
Sbjct: 227 RYFVTIVAS 235
>gi|195108383|ref|XP_001998772.1| GI23447 [Drosophila mojavensis]
gi|193915366|gb|EDW14233.1| GI23447 [Drosophila mojavensis]
Length = 1684
Score = 124 bits (311), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 62/129 (48%), Positives = 87/129 (67%), Gaps = 25/129 (19%)
Query: 1 LTCTVKVSNRKRTIPVIVRVSDL-------------------TPVGSTIFKNLRAVDADA 41
++CT++ SN+KR IP+IVRVSD+ TP+G+T+++N++A+D DA
Sbjct: 82 VSCTIRESNKKRNIPLIVRVSDVNDNAPHFMNTPYEITVPESTPLGTTVYRNIQALDKDA 141
Query: 42 GVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQ 101
GVNGLVEYFIV G A+ +++T DGY F+I+ PHQGQVTV ++LD+EK Q
Sbjct: 142 GVNGLVEYFIVK------GDANSTEDEKLTSADGYGTFAISFPHQGQVTVAKTLDYEKIQ 195
Query: 102 RYLVTIVAS 110
RY +TIVAS
Sbjct: 196 RYYLTIVAS 204
>gi|195054108|ref|XP_001993968.1| GH18138 [Drosophila grimshawi]
gi|193895838|gb|EDV94704.1| GH18138 [Drosophila grimshawi]
Length = 1728
Score = 123 bits (308), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/129 (48%), Positives = 86/129 (66%), Gaps = 25/129 (19%)
Query: 1 LTCTVKVSNRKRTIPVIVRVSDL-------------------TPVGSTIFKNLRAVDADA 41
++CT++ +N+KR IP+IVRVSD+ TP+G+T+F+N++AVD DA
Sbjct: 120 VSCTIRETNKKRNIPLIVRVSDVNDNAPQFMNTPYEVTVPESTPLGTTVFRNIQAVDKDA 179
Query: 42 GVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQ 101
GVNGLVEYFIV G + +++T DGY F+I+ PHQGQVTV ++LD+EK Q
Sbjct: 180 GVNGLVEYFIVK------GNTNTTEDEKLTSADGYGSFAISFPHQGQVTVAKTLDYEKIQ 233
Query: 102 RYLVTIVAS 110
RY +TIVAS
Sbjct: 234 RYYLTIVAS 242
>gi|195389138|ref|XP_002053234.1| GJ23774 [Drosophila virilis]
gi|194151320|gb|EDW66754.1| GJ23774 [Drosophila virilis]
Length = 1731
Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/129 (46%), Positives = 86/129 (66%), Gaps = 25/129 (19%)
Query: 1 LTCTVKVSNRKRTIPVIVRVSDL-------------------TPVGSTIFKNLRAVDADA 41
++CT++ SN+KR IP+IVRVSD+ TP+G+T+++N++A+D DA
Sbjct: 117 VSCTIRESNKKRNIPIIVRVSDVNDNAPHFMNTPYEITVPESTPLGTTVYRNIQALDKDA 176
Query: 42 GVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQ 101
GVNGLVEYFIV G + D++T DG+ F+I+ PHQGQVTV ++LD+EK Q
Sbjct: 177 GVNGLVEYFIVK------GNINMTEDDKLTSADGFGTFAISFPHQGQVTVAKTLDYEKIQ 230
Query: 102 RYLVTIVAS 110
R+ +TIVAS
Sbjct: 231 RFYLTIVAS 239
>gi|157118805|ref|XP_001653269.1| cadherin [Aedes aegypti]
gi|108875581|gb|EAT39806.1| AAEL008421-PA [Aedes aegypti]
Length = 1736
Score = 118 bits (295), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 61/129 (47%), Positives = 83/129 (64%), Gaps = 22/129 (17%)
Query: 1 LTCTVKVSNRKRTIPVIVRVSDL-------------------TPVGSTIFKNLRAVDADA 41
++CT++ + R+R IP+IVRVSD+ TPVG+TIFKN+ A D DA
Sbjct: 114 ISCTIRSTRRRRNIPIIVRVSDVNDNPPMFINTPYETAVPESTPVGTTIFKNVLAQDKDA 173
Query: 42 GVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQ 101
GVNGLVEYF++ +NI + + +T DGY F+I PHQGQVTV ++LD+E+ Q
Sbjct: 174 GVNGLVEYFVIEGSRQNIS---DISPNTLTAADGYGVFAIAYPHQGQVTVVKTLDYERIQ 230
Query: 102 RYLVTIVAS 110
RY +TIVAS
Sbjct: 231 RYYLTIVAS 239
>gi|194906021|ref|XP_001981299.1| GG11701 [Drosophila erecta]
gi|190655937|gb|EDV53169.1| GG11701 [Drosophila erecta]
Length = 1705
Score = 118 bits (295), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 62/129 (48%), Positives = 85/129 (65%), Gaps = 26/129 (20%)
Query: 1 LTCTVKVSNRKRTIPVIVRVSDL-------------------TPVGSTIFKNLRAVDADA 41
++CT + +++KRTIP+IVRVSD+ TPVG+TIF+N++A+D DA
Sbjct: 112 VSCTTRSTSKKRTIPIIVRVSDINDNAPRFMNTPYEVTVPESTPVGTTIFRNIQALDKDA 171
Query: 42 GVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQ 101
GVNGLVEYFI G+A+ ++ + DGY F+I+ PHQGQVTV ++LDFEK Q
Sbjct: 172 GVNGLVEYFIAE------GSANSTDAEKYSA-DGYGTFAISFPHQGQVTVAKTLDFEKIQ 224
Query: 102 RYLVTIVAS 110
Y +TIVAS
Sbjct: 225 TYYLTIVAS 233
>gi|194745576|ref|XP_001955263.1| GF18671 [Drosophila ananassae]
gi|190628300|gb|EDV43824.1| GF18671 [Drosophila ananassae]
Length = 1704
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/129 (46%), Positives = 84/129 (65%), Gaps = 26/129 (20%)
Query: 1 LTCTVKVSNRKRTIPVIVRVSDL-------------------TPVGSTIFKNLRAVDADA 41
++CTV+ +++KR IP+IVRVSD+ TPVG+TIF+N++A+D DA
Sbjct: 112 VSCTVRSTSKKRNIPIIVRVSDINDNAPRFMNTPYEVTVPESTPVGTTIFRNIQALDKDA 171
Query: 42 GVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQ 101
GVNGLVEYFI G + +++ + DGY FSI+ PHQGQVTV ++LD+EK
Sbjct: 172 GVNGLVEYFIAE------GHVNATDEEKFSA-DGYGTFSISFPHQGQVTVAKTLDYEKIH 224
Query: 102 RYLVTIVAS 110
RY +TI+AS
Sbjct: 225 RYYLTIIAS 233
>gi|347967593|ref|XP_312660.5| AGAP002310-PA [Anopheles gambiae str. PEST]
gi|333468389|gb|EAA07876.6| AGAP002310-PA [Anopheles gambiae str. PEST]
Length = 1762
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/132 (47%), Positives = 84/132 (63%), Gaps = 26/132 (19%)
Query: 1 LTCTVKVSNRKRTIPVIVRVSDL----------------------TPVGSTIFKNLRAVD 38
+TC V+ + RKR IP+IVRVSD+ TPVG+TIF++++A D
Sbjct: 122 ITCMVRSTRRKRNIPIIVRVSDVNDNPPMFINTPYETTVPEVGVSTPVGTTIFRSIQATD 181
Query: 39 ADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSLDFE 98
DAGVNGLVEYFIV +NI + + +T DG+ F+I PHQGQVTV ++LD+E
Sbjct: 182 KDAGVNGLVEYFIVEGS-QNIS---DISPNTLTAADGFGVFAIAYPHQGQVTVVKTLDYE 237
Query: 99 KTQRYLVTIVAS 110
+TQRY +TIVAS
Sbjct: 238 RTQRYYLTIVAS 249
>gi|59936685|gb|AAX12106.1| cadherin 99C [Drosophila melanogaster]
gi|59936706|gb|AAX12107.1| cadherin 99C [Drosophila melanogaster]
Length = 1706
Score = 115 bits (287), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 61/129 (47%), Positives = 83/129 (64%), Gaps = 26/129 (20%)
Query: 1 LTCTVKVSNRKRTIPVIVRVSDL-------------------TPVGSTIFKNLRAVDADA 41
++CT + + +KRTIP+IVRVSD+ TPVG+TIF+N++A+D DA
Sbjct: 113 VSCTTRSTGKKRTIPIIVRVSDINDNAPRFMNTPYEVTVPESTPVGTTIFRNIQALDKDA 172
Query: 42 GVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQ 101
GVNGLVEYFI G+ + ++ + DGY F+I+ PHQGQVTV ++LDFEK Q
Sbjct: 173 GVNGLVEYFIAE------GSPNSTNVEKYSA-DGYGTFAISFPHQGQVTVAKTLDFEKIQ 225
Query: 102 RYLVTIVAS 110
Y +TIVAS
Sbjct: 226 TYYLTIVAS 234
>gi|195503140|ref|XP_002098526.1| GE23891 [Drosophila yakuba]
gi|194184627|gb|EDW98238.1| GE23891 [Drosophila yakuba]
Length = 1705
Score = 115 bits (287), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 61/129 (47%), Positives = 84/129 (65%), Gaps = 26/129 (20%)
Query: 1 LTCTVKVSNRKRTIPVIVRVSDL-------------------TPVGSTIFKNLRAVDADA 41
++CT + +++KRTIP+IVRVSD+ TPVG+TIF+N++A+D DA
Sbjct: 112 VSCTTRSTSKKRTIPIIVRVSDINDNAPRFMNTPYEVTVPESTPVGTTIFRNIQALDKDA 171
Query: 42 GVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQ 101
GVNGLVEYFI G+ + ++ + DGY F+I+ PHQGQVTV ++LDFEK Q
Sbjct: 172 GVNGLVEYFIAE------GSPNSTDVEKYSA-DGYGTFAISFPHQGQVTVAKTLDFEKIQ 224
Query: 102 RYLVTIVAS 110
Y +TIVAS
Sbjct: 225 TYYLTIVAS 233
>gi|54650730|gb|AAV36944.1| LP14319p [Drosophila melanogaster]
Length = 1691
Score = 115 bits (287), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 61/129 (47%), Positives = 83/129 (64%), Gaps = 26/129 (20%)
Query: 1 LTCTVKVSNRKRTIPVIVRVSDL-------------------TPVGSTIFKNLRAVDADA 41
++CT + + +KRTIP+IVRVSD+ TPVG+TIF+N++A+D DA
Sbjct: 98 VSCTTRSTGKKRTIPIIVRVSDINDNAPRFMNTPYEVTVPESTPVGTTIFRNIQALDKDA 157
Query: 42 GVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQ 101
GVNGLVEYFI G+ + ++ + DGY F+I+ PHQGQVTV ++LDFEK Q
Sbjct: 158 GVNGLVEYFIAE------GSPNSTNVEKYSA-DGYGTFAISFPHQGQVTVAKTLDFEKIQ 210
Query: 102 RYLVTIVAS 110
Y +TIVAS
Sbjct: 211 TYYLTIVAS 219
>gi|24651170|ref|NP_733314.1| cadherin 99C, isoform A [Drosophila melanogaster]
gi|320543453|ref|NP_001189311.1| cadherin 99C, isoform B [Drosophila melanogaster]
gi|23172606|gb|AAF56955.2| cadherin 99C, isoform A [Drosophila melanogaster]
gi|318068893|gb|ADV37401.1| cadherin 99C, isoform B [Drosophila melanogaster]
Length = 1706
Score = 115 bits (287), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 61/129 (47%), Positives = 83/129 (64%), Gaps = 26/129 (20%)
Query: 1 LTCTVKVSNRKRTIPVIVRVSDL-------------------TPVGSTIFKNLRAVDADA 41
++CT + + +KRTIP+IVRVSD+ TPVG+TIF+N++A+D DA
Sbjct: 113 VSCTTRSTGKKRTIPIIVRVSDINDNAPRFMNTPYEVTVPESTPVGTTIFRNIQALDKDA 172
Query: 42 GVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQ 101
GVNGLVEYFI G+ + ++ + DGY F+I+ PHQGQVTV ++LDFEK Q
Sbjct: 173 GVNGLVEYFIAE------GSPNSTNVEKYSA-DGYGTFAISFPHQGQVTVAKTLDFEKIQ 225
Query: 102 RYLVTIVAS 110
Y +TIVAS
Sbjct: 226 TYYLTIVAS 234
>gi|195341323|ref|XP_002037260.1| GM12830 [Drosophila sechellia]
gi|194131376|gb|EDW53419.1| GM12830 [Drosophila sechellia]
Length = 352
Score = 114 bits (286), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 61/129 (47%), Positives = 83/129 (64%), Gaps = 26/129 (20%)
Query: 1 LTCTVKVSNRKRTIPVIVRVSDL-------------------TPVGSTIFKNLRAVDADA 41
++CT + + +KRTIP+IVRVSD+ TPVG+TIF+N++A+D DA
Sbjct: 113 VSCTTRSTGKKRTIPIIVRVSDINDNAPRFMNTPYEVTVPESTPVGTTIFRNIQALDKDA 172
Query: 42 GVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQ 101
GVNGLVEYFI G+ + ++ + DGY F+I+ PHQGQVTV ++LDFEK Q
Sbjct: 173 GVNGLVEYFIAE------GSPNSTNVEKYSA-DGYGTFAISFPHQGQVTVAKTLDFEKIQ 225
Query: 102 RYLVTIVAS 110
Y +TIVAS
Sbjct: 226 TYYLTIVAS 234
>gi|312385761|gb|EFR30181.1| hypothetical protein AND_00375 [Anopheles darlingi]
Length = 279
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 65/87 (74%), Gaps = 4/87 (4%)
Query: 24 TPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINL 83
TPVG+TIF++++A D DAGVNGL+EYFIV +N+ + + +T DG+ F+I
Sbjct: 77 TPVGTTIFRSIQATDKDAGVNGLIEYFIVEGA-QNV---SDISPNTLTAADGHGVFAIAY 132
Query: 84 PHQGQVTVNRSLDFEKTQRYLVTIVAS 110
PHQGQVTV ++LD+E+TQRY +TIVAS
Sbjct: 133 PHQGQVTVVKTLDYERTQRYYLTIVAS 159
>gi|195574873|ref|XP_002105408.1| GD21473 [Drosophila simulans]
gi|194201335|gb|EDX14911.1| GD21473 [Drosophila simulans]
Length = 455
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/87 (55%), Positives = 63/87 (72%), Gaps = 7/87 (8%)
Query: 24 TPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINL 83
TPVG+TIF+N++A+D DAGVNGLVEYFI G+ + ++ + DGY F+I+
Sbjct: 76 TPVGTTIFRNIQALDKDAGVNGLVEYFIAE------GSPNSTNVEKYSA-DGYGTFAISF 128
Query: 84 PHQGQVTVNRSLDFEKTQRYLVTIVAS 110
PHQGQVTV ++LDFEK Q Y +TIVAS
Sbjct: 129 PHQGQVTVAKTLDFEKIQTYYLTIVAS 155
>gi|391337562|ref|XP_003743136.1| PREDICTED: protocadherin Fat 2-like [Metaseiulus occidentalis]
Length = 1401
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 71/129 (55%), Gaps = 34/129 (26%)
Query: 1 LTCTVKVSNRKRTIPVIVRVSDL-------------------TPVGSTIFKNLRAVDADA 41
+ C K +RK+ + V+VRV+D+ PVG+ +F N A D+D+
Sbjct: 110 IRCEAKDQSRKKVVQVLVRVNDVNDNAPQFTSENYTTSISEEAPVGTMVFANFTATDSDS 169
Query: 42 GVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQ 101
GVNGLVEYFI + G AD D SYFSI+ PHQG VT+ + LD+E+++
Sbjct: 170 GVNGLVEYFI-----EETGNAD----------DAASYFSIDSPHQGIVTIKKPLDYEQSK 214
Query: 102 RYLVTIVAS 110
YL+ ++A+
Sbjct: 215 AYLLRVIAA 223
>gi|321472651|gb|EFX83620.1| hypothetical protein DAPPUDRAFT_301624 [Daphnia pulex]
Length = 1627
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 69/134 (51%), Gaps = 25/134 (18%)
Query: 1 LTCTVKVSNRKRTIPVIVRVSDLT-------------------PVGSTIFKNLRAVDADA 41
++CT + R+R IPVIVR+SD+ PVG + +++ A DADA
Sbjct: 116 VSCTNSATGRRRNIPVIVRISDVNDKAPVFLNSSYSVTIPEDLPVGGIVIRDIEAKDADA 175
Query: 42 GVNGLVEYFIVPSQDK-----NIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSLD 96
G+N LVEY +VP+ + N+ + + DG+ F H +T+ + +D
Sbjct: 176 GINALVEYKVVPNSQRMRSGGNVSLFNETNP-ALDAFDGFGMFEFPAAHIPVLTLRQPID 234
Query: 97 FEKTQRYLVTIVAS 110
+E +RYLVTIVAS
Sbjct: 235 YESVRRYLVTIVAS 248
>gi|170037430|ref|XP_001846561.1| cadherin [Culex quinquefasciatus]
gi|167880554|gb|EDS43937.1| cadherin [Culex quinquefasciatus]
Length = 88
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 45/65 (69%), Gaps = 3/65 (4%)
Query: 24 TPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINL 83
TPVG+TIF+N++A D DAGVNGLVEYF+V +NI + + +T DGY F+I
Sbjct: 22 TPVGTTIFRNVQAQDKDAGVNGLVEYFVVEGSQQNISD---ISPNTLTAADGYGVFAIAY 78
Query: 84 PHQGQ 88
PHQGQ
Sbjct: 79 PHQGQ 83
>gi|443705216|gb|ELU01871.1| hypothetical protein CAPTEDRAFT_220753 [Capitella teleta]
Length = 9334
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 46/85 (54%), Gaps = 14/85 (16%)
Query: 14 IPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVV 73
IP V +S+LTPVG+TIF+ + A D DAG N +++ IV DG ++
Sbjct: 152 IPYEVLISELTPVGTTIFRQITATDLDAGSNSQIDFDIV--------AGDG------SIY 197
Query: 74 DGYSYFSINLPHQGQVTVNRSLDFE 98
DG +F I +G V + +LDFE
Sbjct: 198 DGVRHFHIPRQDEGLVVIANALDFE 222
>gi|260818609|ref|XP_002604475.1| hypothetical protein BRAFLDRAFT_79224 [Branchiostoma floridae]
gi|229289802|gb|EEN60486.1| hypothetical protein BRAFLDRAFT_79224 [Branchiostoma floridae]
Length = 662
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 28/96 (29%)
Query: 20 VSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS-Y 78
V +LTPVGST+F+ L A D D+ NG V Y I +G S Y
Sbjct: 107 VIELTPVGSTVFRRLTAEDPDSNENGRVSYQI----------------------EGQSEY 144
Query: 79 FSINLPHQGQVTVNRSLDFE-----KTQRYLVTIVA 109
F I LP G + + +SLD+E + ++YL+ IVA
Sbjct: 145 FEIPLPETGDIVLKQSLDYEGFQPGEKKKYLIPIVA 180
>gi|405951930|gb|EKC19797.1| Protocadherin-like wing polarity protein stan [Crassostrea gigas]
Length = 927
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 14/96 (14%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P V + PVG+T++ + D DAG N +E+ IV DG ++ D
Sbjct: 167 PYTASVDESAPVGTTVYSGISTTDLDAGPNKEIEFAIV--------AGDG------SIND 212
Query: 75 GYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
G + F + + +G++ V + LDFE Q Y +TI A+
Sbjct: 213 GSTRFLLPITSRGEIVVRQPLDFESVQSYTLTISAT 248
>gi|405961370|gb|EKC27181.1| Cadherin-89D [Crassostrea gigas]
Length = 551
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 14/96 (14%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P V + PVG+T++ + A D DAG N +E+ IV DG ++ D
Sbjct: 165 PYTASVDESAPVGTTVYSGISATDLDAGSNKEIEFAIV--------AGDG------SIND 210
Query: 75 GYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
G + F + +G++ V + LDFE + Y + I A+
Sbjct: 211 GSTKFLLPKKSRGEIVVRQPLDFESVRSYTLNISAT 246
>gi|390361181|ref|XP_794248.3| PREDICTED: protocadherin-15-like [Strongylocentrotus purpuratus]
Length = 1607
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 16/96 (16%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADA-GVNGLVEYFIVPSQDKNIGTADGVGKDRVTVV 73
P V VS+ T + IF + A D D NG + + IVP+Q+ +
Sbjct: 62 PYTVSVSEATAINEVIFAGIEADDNDGDNRNGQISFEIVPNQNDPMSN------------ 109
Query: 74 DGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
SYF + +G+VT+ +SLDFE Q++ V+IVA
Sbjct: 110 ---SYFDMPNTGKGEVTLLQSLDFETRQQWTVSIVA 142
>gi|395736272|ref|XP_003776724.1| PREDICTED: protocadherin beta-13 [Pongo abelii]
Length = 781
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 48/92 (52%), Gaps = 19/92 (20%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V++S+ +PVG + K + A DAD GVNG + Y + + D+ +GK
Sbjct: 250 VQISEDSPVGFLVVK-VSATDADTGVNGEISYSLFQASDE-------IGKT--------- 292
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
F IN P G++ + + LDFEK Q Y V I A
Sbjct: 293 -FKIN-PLTGEIELKKQLDFEKLQSYEVNIEA 322
>gi|327273774|ref|XP_003221655.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 1-like [Anolis
carolinensis]
Length = 4585
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 18/86 (20%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
P G+ + + ++A D D+G NG V Y + P+QD +I + F+IN
Sbjct: 2824 PAGTRVIQ-IKATDQDSGSNGQVTYRLYPAQDADISES----------------FAINA- 2865
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVAS 110
G +T + LD EK +Y +T+VAS
Sbjct: 2866 ETGWITTLKELDHEKQNKYKITVVAS 2891
>gi|327277139|ref|XP_003223323.1| PREDICTED: cadherin-related family member 1-like [Anolis
carolinensis]
Length = 867
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 24/97 (24%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P IV+V + TP GS+IFK + AVD D G G + YF+ +NI T
Sbjct: 141 PYIVQVPEDTPSGSSIFK-IEAVDKDTGSGGSITYFL-----QNIRT------------- 181
Query: 75 GYSYFSINLPHQGQVTVNR--SLDFEKTQRYLVTIVA 109
+ F+I+ H G + + +LD+EK++ Y VT+VA
Sbjct: 182 --NKFTIDR-HSGVLRIKSGVTLDYEKSRTYFVTVVA 215
>gi|357623109|gb|EHJ74393.1| cadherin [Danaus plexippus]
Length = 2755
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 23/98 (23%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQ--DKNIGTADGVGKDRVTV 72
P+ + +S++T +GSTI+ N A DAD+G NG + ++I+ SQ N+ D +
Sbjct: 824 PINIDISEITNIGSTIY-NFSAKDADSGSNGELNFYIISSQPVSNNVFNLDSL------- 875
Query: 73 VDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
G +T+N LDFE + Y + + A+
Sbjct: 876 -------------TGTLTLNSHLDFEILKEYWLVVEAT 900
Score = 35.0 bits (79), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 46/97 (47%), Gaps = 20/97 (20%)
Query: 13 TIPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTV 72
T V V V++ +GS ++ RA D D G NG+V Y +V + G A+
Sbjct: 290 TSSVRVSVAESAQIGSIVYA-ARATDEDEGKNGMVTYQLVSA----TGPAN--------- 335
Query: 73 VDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
F++N H G VT+ R LD+E R+ V I A
Sbjct: 336 -----TFAVNSQH-GLVTLLRLLDYENLVRHTVIISA 366
>gi|47219706|emb|CAG12628.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1389
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 46/97 (47%), Gaps = 18/97 (18%)
Query: 18 VRVSDLTPVGSTIFK----NLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVV 73
V VS+LTPVG+TIF N A D D G NG +EY I D V +R
Sbjct: 124 VAVSELTPVGTTIFSGFFGNNGATDIDDGPNGQIEYTI------QYNPNDPVETNRT--- 174
Query: 74 DGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + L++E+ RYLV I A+
Sbjct: 175 -----FDIPLTLFGAVVLRERLNYEEITRYLVIIQAN 206
>gi|443718191|gb|ELU08936.1| hypothetical protein CAPTEDRAFT_178354 [Capitella teleta]
Length = 890
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 43/92 (46%), Gaps = 18/92 (19%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V V + TP+G+ I + +RA D DAG NG VEY S ++ G G+
Sbjct: 141 VSVRENTPLGTNIMR-VRARDVDAGANGEVEYTFSDSTEREYGNLFGIS----------- 188
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
P +G + + LD+E YL++I A
Sbjct: 189 ------PEEGDIFLREELDYEDGDIYLLSITA 214
>gi|195350165|ref|XP_002041612.1| GM16650 [Drosophila sechellia]
gi|194123385|gb|EDW45428.1| GM16650 [Drosophila sechellia]
Length = 2943
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 48/102 (47%), Gaps = 28/102 (27%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNG-----LVEYF--IVPSQDKNIGTADGVGK 67
P+ ++VS+ TPVG TI N A DAD G NG L+ YF + SQ++ I + D +
Sbjct: 890 PIDLQVSEATPVG-TIIHNFTATDADTGTNGDLQYRLIRYFPQLNESQEQAIFSMDSL-- 946
Query: 68 DRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
G +++ LDFE Q YL+ + A
Sbjct: 947 ------------------TGALSLQAPLDFEAVQEYLLIVQA 970
>gi|301612237|ref|XP_002935627.1| PREDICTED: cadherin-6-like [Xenopus (Silurana) tropicalis]
Length = 792
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 17/91 (18%)
Query: 19 RVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSY 78
R + +PVGS+I K ++A DAD G N +EY I + N+ + DR+T
Sbjct: 278 RALESSPVGSSIGK-IKANDADVGENAEMEYHISEGDESNMFE---IITDRIT------- 326
Query: 79 FSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
+G +TV ++LDFEK + Y + + A
Sbjct: 327 ------QEGAITVKKALDFEKKKLYTLKVEA 351
>gi|195575605|ref|XP_002077668.1| GD22944 [Drosophila simulans]
gi|194189677|gb|EDX03253.1| GD22944 [Drosophila simulans]
Length = 3038
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 48/102 (47%), Gaps = 28/102 (27%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNG-----LVEYF--IVPSQDKNIGTADGVGK 67
P+ ++VS+ TPVG TI N A DAD G NG L+ YF + SQ++ I + D +
Sbjct: 1508 PIDLQVSEATPVG-TIIHNFTATDADTGTNGDLQYRLIRYFPQLNESQEQAIFSMDSL-- 1564
Query: 68 DRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
G +++ LDFE Q YL+ + A
Sbjct: 1565 ------------------TGALSLQAPLDFEAVQEYLLIVQA 1588
Score = 35.0 bits (79), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 19/84 (22%)
Query: 26 VGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPH 85
VG+++ + + A D DA NGLVEY I Q D F I+ P
Sbjct: 301 VGTSVLQ-VYASDTDADENGLVEYAINRRQS-----------------DKEQMFRID-PR 341
Query: 86 QGQVTVNRSLDFEKTQRYLVTIVA 109
G + +N++LDFE + + + +VA
Sbjct: 342 TGAIYINKALDFETKELHELVVVA 365
>gi|432847530|ref|XP_004066068.1| PREDICTED: protocadherin-23-like [Oryzias latipes]
Length = 3252
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 23/94 (24%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
+VS+ + +G+++ + + A D D G+NGLV Y I+ +K
Sbjct: 2564 AQVSENSQIGTSLLQ-VSAQDPDLGINGLVRYDIIAGNNKG------------------- 2603
Query: 78 YFSINL-PHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+NL PH G + +N SLD+E+ +Y +TI AS
Sbjct: 2604 --HLNLDPHTGLLLINHSLDYEQDPKYTLTIRAS 2635
>gi|326436675|gb|EGD82245.1| FAT3 protein [Salpingoeca sp. ATCC 50818]
Length = 7553
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 51/116 (43%), Gaps = 27/116 (23%)
Query: 1 LTCTVKVSNRKRTIPVIVR------VSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPS 54
T T+ +S+ PV VR V +LTPVG + L A DAD GV G V Y I
Sbjct: 3757 FTLTLSISDANDNAPVFVRDTVVISVPELTPVGQ-VLTQLIASDADTGVGGEVRYSITGG 3815
Query: 55 QDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
++ FSI+ G +++ + LD+E T Y +T+ A+
Sbjct: 3816 NEEG-------------------RFSIDA-MLGTISIQQPLDYETTMSYALTVTAT 3851
>gi|47224125|emb|CAG13045.1| unnamed protein product [Tetraodon nigroviridis]
Length = 230
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 58/120 (48%), Gaps = 18/120 (15%)
Query: 5 VKVSNRKRTIPVI-------VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFI-VPSQD 56
V++ N +PV V +++LTPVG+ +F +++A DAD N + YFI S
Sbjct: 81 VEILNANDNLPVFQDRADLTVHLNELTPVGTVVF-SVQATDAD---NDKIIYFIDQTSVS 136
Query: 57 KNIGTADGVGKDRVTVV------DGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
T + T V YF I LP+ G+V +++ LD+E VTI+AS
Sbjct: 137 SRSNTHTQTHTESFTPVCVCVWKPDAEYFKIELPNSGEVILSKPLDYESKDLLTVTILAS 196
>gi|426365058|ref|XP_004049606.1| PREDICTED: cadherin-23-like isoform 2 [Gorilla gorilla gorilla]
Length = 406
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 47/97 (48%), Gaps = 25/97 (25%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEY-FIVPSQDKNIGTADGVGKDRVTVV 73
P VR+ + TPVG+ IF + A D D G G V Y F PSQ
Sbjct: 136 PYSVRIPENTPVGTPIFI-VNATDPDLGAGGSVLYSFQPPSQ------------------ 176
Query: 74 DGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+F+I+ H G VTV R LD+E TQ Y +T+ A+
Sbjct: 177 ----FFAIDSAH-GIVTVIRELDYETTQAYQLTVNAT 208
>gi|332834375|ref|XP_507839.3| PREDICTED: cadherin-23 [Pan troglodytes]
Length = 1422
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 47/97 (48%), Gaps = 25/97 (25%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEY-FIVPSQDKNIGTADGVGKDRVTVV 73
P VR+ + TPVG+ IF + A D D G G V Y F PSQ
Sbjct: 136 PYSVRIPENTPVGTPIFI-VNATDPDLGAGGSVLYSFQPPSQ------------------ 176
Query: 74 DGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+F+I+ H G VTV R LD+E TQ Y +T+ A+
Sbjct: 177 ----FFAIDSAH-GIVTVIRELDYETTQAYQLTVNAT 208
>gi|397490019|ref|XP_003816007.1| PREDICTED: cadherin-23 [Pan paniscus]
Length = 3354
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 47/97 (48%), Gaps = 25/97 (25%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEY-FIVPSQDKNIGTADGVGKDRVTVV 73
P VR+ + TPVG+ IF + A D D G G V Y F PSQ
Sbjct: 136 PYSVRIPENTPVGTPIFI-VNATDPDLGAGGSVLYSFQPPSQ------------------ 176
Query: 74 DGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+F+I+ H G VTV R LD+E TQ Y +T+ A+
Sbjct: 177 ----FFAIDSAH-GIVTVIRELDYETTQAYQLTVNAT 208
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 40/85 (47%), Gaps = 23/85 (27%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
PVG TI + A DAD+G L+EY ++ DG S F+IN P
Sbjct: 2416 PVG-TIILTVTATDADSGNFALIEY---------------------SLGDGESKFAIN-P 2452
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVA 109
G + V SLD EK Y++T +A
Sbjct: 2453 TTGDIYVLSSLDREKKDHYILTALA 2477
>gi|403256580|ref|XP_003920947.1| PREDICTED: uncharacterized protein LOC101030360 [Saimiri
boliviensis boliviensis]
Length = 1858
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 19/92 (20%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V++S+ +P+G + K + A D D GVNG + Y + + D+ +GK
Sbjct: 918 VQISEDSPIGFLVVK-VSATDVDTGVNGEISYSLFQASDE-------IGKT--------- 960
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
F IN P G++ + + LDFEK Q Y V + A
Sbjct: 961 -FKIN-PLTGEIELKKQLDFEKLQSYEVNVEA 990
Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 43/94 (45%), Gaps = 21/94 (22%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEY-FIVPSQDKNIGTADGVGKDRVTVVDGY 76
V+V + P+GS I + A D DAG +G + Y F S+D R T
Sbjct: 1549 VQVPEDKPIGSWIV-TISAKDLDAGNHGKISYTFFHASEDV-----------RKT----- 1591
Query: 77 SYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F IN P G+V + LDFE Q Y + I A+
Sbjct: 1592 --FEIN-PMSGEVNLRSPLDFEAIQSYTINIQAT 1622
>gi|4887715|gb|AAA79329.2| adherin [Drosophila melanogaster]
Length = 3503
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 18/98 (18%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIV---PSQDKNIGTADGVGKDRVT 71
P+ ++VS+ TPVG TI N A DAD G NG ++Y ++ P +++ A
Sbjct: 1436 PIDLQVSEATPVG-TIIHNFTATDADTGTNGDLQYRLIRYFPQLNESQEQA--------- 1485
Query: 72 VVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
S FS++ G +++ LDFE Q YL+ + A
Sbjct: 1486 ----MSLFSMD-SLTGALSLQAPLDFEAVQEYLLIVQA 1518
Score = 35.0 bits (79), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 19/84 (22%)
Query: 26 VGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPH 85
VG+++ + + A D DA NGLVEY I Q D F I+ P
Sbjct: 248 VGTSVLQ-VYASDTDADENGLVEYAINRRQS-----------------DKEQMFRID-PR 288
Query: 86 QGQVTVNRSLDFEKTQRYLVTIVA 109
G + +N++LDFE + + + +VA
Sbjct: 289 TGAIYINKALDFETKELHELVVVA 312
>gi|345321587|ref|XP_003430456.1| PREDICTED: cadherin-related family member 1-like, partial
[Ornithorhynchus anatinus]
Length = 234
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 49/97 (50%), Gaps = 24/97 (24%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P IV V + TP GS+IF+ +RAVD D G G V YF+ ++ A+ DR
Sbjct: 141 PYIVLVPEDTPAGSSIFR-VRAVDRDTGAGGSVTYFLQNAR------ANKFTVDR----- 188
Query: 75 GYSYFSINLPHQG--QVTVNRSLDFEKTQRYLVTIVA 109
H G +V +LD+EK++ + VT+VA
Sbjct: 189 ----------HSGVLRVKAGATLDYEKSRTHFVTVVA 215
>gi|224043651|ref|XP_002200195.1| PREDICTED: protocadherin Fat 3 [Taeniopygia guttata]
Length = 4557
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 21/96 (21%)
Query: 12 RTIPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVT 71
++ P V+VS+ PVG+TI + ++A DAD+G NG V Y I D N+
Sbjct: 728 KSFPADVKVSEDLPVGATILR-IKAYDADSGFNGRVLYTI---SDGNVD----------- 772
Query: 72 VVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTI 107
S F+I++ G ++V LD EKT+ YL+ I
Sbjct: 773 -----SCFNIDM-EMGILSVLMPLDREKTELYLLNI 802
>gi|198421140|ref|XP_002120840.1| PREDICTED: hypothetical protein, partial [Ciona intestinalis]
Length = 2746
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 13/91 (14%)
Query: 20 VSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYF 79
V++ PVG I + A DADAG NG V Y IV S +IG + ++ SYF
Sbjct: 785 VAEDEPVGFPI-SQISAEDADAGTNGRVVYSIV-SVTSDIGRS----------IEEMSYF 832
Query: 80 SINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
++ P+ G +TV + LD+E+++ + + + AS
Sbjct: 833 HVD-PNTGVLTVAKQLDYERSKTHFINVSAS 862
>gi|262263239|tpg|DAA06616.1| TPA_inf: protocadherin gamma b14 isoform [Anolis carolinensis]
Length = 939
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 23/95 (24%)
Query: 17 IVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFI--VPSQDKNIGTADGVGKDRVTVVD 74
IV + + P GS + + ++A+D DAG NG + Y +P + + D
Sbjct: 249 IVNLKENMPRGSLVVQ-VKAMDKDAGSNGQINYVFKNIPERARQKFILD----------- 296
Query: 75 GYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
P G++T+ +SLDFE+T +YL+T+ A
Sbjct: 297 ---------PKDGEITIKKSLDFEETDKYLLTVEA 322
>gi|426365056|ref|XP_004049605.1| PREDICTED: cadherin-23-like isoform 1 [Gorilla gorilla gorilla]
Length = 530
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 47/97 (48%), Gaps = 25/97 (25%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEY-FIVPSQDKNIGTADGVGKDRVTVV 73
P VR+ + TPVG+ IF + A D D G G V Y F PSQ
Sbjct: 136 PYSVRIPENTPVGTPIFI-VNATDPDLGAGGSVLYSFQPPSQ------------------ 176
Query: 74 DGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+F+I+ H G VTV R LD+E TQ Y +T+ A+
Sbjct: 177 ----FFAIDSAH-GIVTVIRELDYETTQAYQLTVNAT 208
>gi|345311026|ref|XP_001519720.2| PREDICTED: protocadherin Fat 1-like, partial [Ornithorhynchus
anatinus]
Length = 2269
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 18/96 (18%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P V++ PVGS + + +RA D D G NG V+Y + P+QD+ + A
Sbjct: 1286 PYAASVAENRPVGSPVVQ-VRASDPDLGPNGQVQYALDPAQDRAVLEA------------ 1332
Query: 75 GYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F+++ P G +T R LD E+ + V +VAS
Sbjct: 1333 ----FAVH-PDSGWLTTLRELDREERATFRVLVVAS 1363
Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 30/94 (31%)
Query: 25 PVGSTIFKN---------LRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
P +T+F+N ++A DAD G+NG + Y +VP D
Sbjct: 1602 PFTATVFENTEPRTPLTRIQATDADTGLNGKIRYTLVPPAD------------------- 1642
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
S+FS++ G V + RSLD E + +T+ A
Sbjct: 1643 -SHFSVDA-DSGIVWLERSLDREVQAVHTLTVRA 1674
>gi|405973235|gb|EKC37959.1| Protocadherin Fat 1 [Crassostrea gigas]
Length = 3515
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 47/94 (50%), Gaps = 24/94 (25%)
Query: 20 VSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVP---SQDKNIGTADGVGKDRVTVVDGY 76
+S+ PVG+++ K + A DAD+G+N ++Y + P S+ NI
Sbjct: 1160 ISEAAPVGTSVLK-VTATDADSGINAEIQYDLSPLDNSRSINI----------------- 1201
Query: 77 SYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F IN P G + R LDFE TQ YL +VA+
Sbjct: 1202 --FQIN-PITGVLRTARLLDFEDTQEYLFHVVAT 1232
>gi|327270381|ref|XP_003219968.1| PREDICTED: protocadherin gamma-B1-like [Anolis carolinensis]
Length = 825
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 23/95 (24%)
Query: 17 IVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFI--VPSQDKNIGTADGVGKDRVTVVD 74
IV + + P GS + + ++A+D DAG NG + Y +P + + D
Sbjct: 249 IVNLKENMPRGSLVVQ-VKAMDKDAGSNGQINYVFKNIPERARQKFILD----------- 296
Query: 75 GYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
P G++T+ +SLDFE+T +YL+T+ A
Sbjct: 297 ---------PKDGKITIKKSLDFEETDKYLLTVEA 322
>gi|194382270|dbj|BAG58890.1| unnamed protein product [Homo sapiens]
Length = 802
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 19/92 (20%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V++S+ +PVG + K + A D D GVNG + Y + + ++ +GK
Sbjct: 250 VQISEDSPVGFLVVK-VSATDVDTGVNGEISYSLFQASEE-------IGKT--------- 292
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
F IN P G++ + + LDFEK Q Y V I A
Sbjct: 293 -FKIN-PLTGEIELKKQLDFEKLQSYEVNIEA 322
>gi|10433211|dbj|BAB13935.1| unnamed protein product [Homo sapiens]
Length = 744
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 19/92 (20%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V++S+ +PVG + K + A D D GVNG + Y + + ++ +GK
Sbjct: 250 VQISEDSPVGFLVVK-VSATDVDTGVNGEISYSLFQASEE-------IGKT--------- 292
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
F IN P G++ + + LDFEK Q Y V I A
Sbjct: 293 -FKIN-PLTGEIELKKQLDFEKLQSYEVNIEA 322
>gi|397518008|ref|XP_003829192.1| PREDICTED: protocadherin beta-13-like [Pan paniscus]
Length = 798
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 19/92 (20%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V++S+ +PVG + K + A D D GVNG + Y + + ++ +GK
Sbjct: 250 VQISEDSPVGFLVVK-VSATDVDTGVNGEISYSLFQASEE-------IGKT--------- 292
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
F IN P G++ + + LDFEK Q Y V I A
Sbjct: 293 -FKIN-PLTGEIELKKQLDFEKLQSYEVNIEA 322
>gi|291409467|ref|XP_002721024.1| PREDICTED: protocadherin 21 [Oryctolagus cuniculus]
Length = 857
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 24/97 (24%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P +V V + TP GS+IFK +RAVD D G G V YF+ +N+
Sbjct: 134 PYVVLVPEDTPAGSSIFK-VRAVDKDTGSGGSVTYFL-----QNLHP------------- 174
Query: 75 GYSYFSINLPHQG--QVTVNRSLDFEKTQRYLVTIVA 109
S F+++ H G ++ +LD+EK++ + +T+VA
Sbjct: 175 --SKFAVDR-HSGVLRLQAGATLDYEKSRTHFITVVA 208
>gi|269914130|ref|NP_001019301.2| protocadherin beta-13 precursor [Pan troglodytes]
Length = 798
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 19/92 (20%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V++S+ +PVG + K + A D D GVNG + Y + + ++ +GK
Sbjct: 250 VQISEDSPVGFLVVK-VSATDVDTGVNGEISYSLFQASEE-------IGKT--------- 292
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
F IN P G++ + + LDFEK Q Y V I A
Sbjct: 293 -FKIN-PLTGEIELKKQLDFEKLQSYEVNIEA 322
>gi|62510888|sp|Q5DRD6.1|PCDBD_PANTR RecName: Full=Protocadherin beta-13; Short=PCDH-beta-13; Flags:
Precursor
Length = 798
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 19/92 (20%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V++S+ +PVG + K + A D D GVNG + Y + + ++ +GK
Sbjct: 250 VQISEDSPVGFLVVK-VSATDVDTGVNGEISYSLFQASEE-------IGKT--------- 292
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
F IN P G++ + + LDFEK Q Y V I A
Sbjct: 293 -FKIN-PLTGEIELKKQLDFEKLQSYEVNIEA 322
>gi|11036654|ref|NP_061756.1| protocadherin beta-13 precursor [Homo sapiens]
gi|13431381|sp|Q9Y5F0.1|PCDBD_HUMAN RecName: Full=Protocadherin beta-13; Short=PCDH-beta-13; Flags:
Precursor
gi|5457033|gb|AAD43753.1|AF152492_1 protocadherin beta 13 [Homo sapiens]
gi|14009455|gb|AAK51613.1|AF217745_1 protocadherin-beta13 [Homo sapiens]
gi|21620005|gb|AAH33068.1| Protocadherin beta 13 [Homo sapiens]
gi|30411001|gb|AAH51348.1| Protocadherin beta 13 [Homo sapiens]
gi|37181979|gb|AAQ88793.1| PCDHB13 [Homo sapiens]
gi|47939613|gb|AAH71934.1| Protocadherin beta 13 [Homo sapiens]
gi|119582374|gb|EAW61970.1| protocadherin beta 13 [Homo sapiens]
Length = 798
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 19/92 (20%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V++S+ +PVG + K + A D D GVNG + Y + + ++ +GK
Sbjct: 250 VQISEDSPVGFLVVK-VSATDVDTGVNGEISYSLFQASEE-------IGKT--------- 292
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
F IN P G++ + + LDFEK Q Y V I A
Sbjct: 293 -FKIN-PLTGEIELKKQLDFEKLQSYEVNIEA 322
>gi|339241777|ref|XP_003376814.1| putative cadherin domain protein [Trichinella spiralis]
gi|316974454|gb|EFV57941.1| putative cadherin domain protein [Trichinella spiralis]
Length = 4414
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 45/85 (52%), Gaps = 21/85 (24%)
Query: 26 VGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPH 85
+G T+F+ +AVD D G +GLV Y I+ G DG + +D P+
Sbjct: 526 IGLTVFQ-FQAVDQDVGADGLVTYSIID------GNEDGRWR-----ID---------PN 564
Query: 86 QGQVTVNRSLDFEKTQRYLVTIVAS 110
G++TV RSLD E+ RY +T+ AS
Sbjct: 565 TGKLTVQRSLDREQVPRYNLTVAAS 589
>gi|158259103|dbj|BAF85510.1| unnamed protein product [Homo sapiens]
Length = 798
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 19/92 (20%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V++S+ +PVG + K + A D D GVNG + Y + + ++ +GK
Sbjct: 250 VQISEDSPVGFLVVK-VSATDVDTGVNGEISYSLFQASEE-------IGKT--------- 292
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
F IN P G++ + + LDFEK Q Y V I A
Sbjct: 293 -FKIN-PLTGEIELKKQLDFEKLQSYEVNIEA 322
>gi|301621392|ref|XP_002940039.1| PREDICTED: protocadherin gamma-B1-like [Xenopus (Silurana)
tropicalis]
Length = 900
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 43/92 (46%), Gaps = 17/92 (18%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V++S+ TPV +T+ ++ A D D G+N + Y + D + T
Sbjct: 251 VKMSENTPVNTTVL-SVDATDKDEGLNAQITYSFSKTSDNQLHTGT-------------- 295
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
F IN P G++T R LDFE Q Y + I A
Sbjct: 296 -FDIN-PTSGKITTKRDLDFESVQSYEIAIEA 325
>gi|345485230|ref|XP_003425221.1| PREDICTED: LOW QUALITY PROTEIN: protein dachsous-like [Nasonia
vitripennis]
Length = 3357
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 41/84 (48%), Gaps = 19/84 (22%)
Query: 26 VGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPH 85
VG+ + K + A DADAG NG +EY I Q D F I+ P
Sbjct: 240 VGTAVLK-VDASDADAGENGRIEYSINRRQS-----------------DREEMFRID-PE 280
Query: 86 QGQVTVNRSLDFEKTQRYLVTIVA 109
G V VN++LDFE +R+ + IVA
Sbjct: 281 TGMVYVNKALDFESKERHELVIVA 304
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 44/91 (48%), Gaps = 7/91 (7%)
Query: 20 VSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYF 79
V + P G+T+F RA D D GV G + Y IV S A+G + D + F
Sbjct: 2732 VGENEPAGTTVFA-ARASDLDRGVYGALNYSIV-SAAMAAAAANGFSD----IDDSWKLF 2785
Query: 80 SINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
SI+ P G VT D+E+ RY ++ A+
Sbjct: 2786 SID-PRSGAVTTRAVFDYEQRNRYAFSVRAT 2815
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 18/94 (19%)
Query: 17 IVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGY 76
+V V + P G+ + + +RA+D D G N V Y I+ KDR + DGY
Sbjct: 1199 VVSVREEQPPGTEVAR-VRALDNDLGENASVTYTIL--------------KDRDS--DGY 1241
Query: 77 SYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ F+I+ P G + +LD E Y +++ AS
Sbjct: 1242 NVFAID-PISGMIKTKVALDHEDRNVYRLSVKAS 1274
>gi|195470324|ref|XP_002087458.1| GE15963 [Drosophila yakuba]
gi|194173559|gb|EDW87170.1| GE15963 [Drosophila yakuba]
Length = 3556
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 18/98 (18%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIV---PSQDKNIGTADGVGKDRVT 71
P+ ++VS+ TPVG TI N A DAD G NG ++Y ++ P +++ A
Sbjct: 1489 PIDLQVSEATPVG-TIIHNFTATDADTGTNGDLQYRLIRYFPQLNESQEQA--------- 1538
Query: 72 VVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
+ FS++ G +++ LDFE Q YL+ + A
Sbjct: 1539 ----MTLFSMD-SLTGSLSLQAPLDFETVQEYLLIVQA 1571
Score = 35.0 bits (79), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 19/84 (22%)
Query: 26 VGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPH 85
VG+++ + + A D DA NGLVEY I Q D F I+ P
Sbjct: 301 VGTSVLQ-VYASDTDADENGLVEYAINRRQS-----------------DKEQMFRID-PR 341
Query: 86 QGQVTVNRSLDFEKTQRYLVTIVA 109
G + +N++LDFE + + + +VA
Sbjct: 342 TGAIYINKALDFETKELHELVVVA 365
Score = 34.7 bits (78), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 18/94 (19%)
Query: 17 IVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGY 76
+V V + P G+ + + +RAVD D G N + Y IV +D DG+
Sbjct: 1263 VVSVREEQPPGTEVVR-VRAVDRDHGQNASITYSIVKGRDS----------------DGH 1305
Query: 77 SYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
FSI+ P G + LD E+ Y + + AS
Sbjct: 1306 GLFSID-PSSGVIRTRVVLDHEERSIYRLGVAAS 1338
>gi|338716526|ref|XP_001501880.3| PREDICTED: protocadherin-15 [Equus caballus]
Length = 1548
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 42/95 (44%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I AD D
Sbjct: 156 VNELTPVGTTIFTGFAGDNGATDIDDGPNGQIEYVI------QYNPADPTSNDT------ 203
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E RY V I A+
Sbjct: 204 ---FEIPLMLTGNVVLRKRLNYEDKTRYFVIIQAN 235
>gi|311271345|ref|XP_001925718.2| PREDICTED: cadherin-23 [Sus scrofa]
Length = 3354
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 47/97 (48%), Gaps = 25/97 (25%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEY-FIVPSQDKNIGTADGVGKDRVTVV 73
P VR+ + TPVG+ IF + A D D G G V Y F PSQ
Sbjct: 136 PYSVRIPENTPVGTPIFI-VNATDPDLGAGGSVLYSFQPPSQ------------------ 176
Query: 74 DGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+F+I+ +G VTV R LD+E TQ Y +T+ A+
Sbjct: 177 ----FFAID-SARGIVTVTRELDYETTQAYQLTVNAT 208
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 21/94 (22%)
Query: 14 IPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVV 73
+P+ + +S+ +PV S+ ++ A DAD+G N L+ + NI + + ++R
Sbjct: 1854 LPMNISISENSPV-SSFVAHILASDADSGCNALLTF--------NITSGN---RERA--- 1898
Query: 74 DGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTI 107
FSIN G VTVNR LD E+ Y +TI
Sbjct: 1899 -----FSINA-TTGIVTVNRPLDRERIPEYKLTI 1926
Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Query: 12 RTIPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFI---VPSQDKNIGTADGV 65
+ +P + V + TP G +IF+ + A+D D G+NGLV Y + +P D I ++ GV
Sbjct: 891 QNLPFVAEVVEGTPAGVSIFQ-VVAIDLDEGLNGLVTYRMQVGMPRLDFLINSSSGV 946
>gi|391334511|ref|XP_003741647.1| PREDICTED: fat-like cadherin-related tumor suppressor homolog
[Metaseiulus occidentalis]
Length = 4558
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 48/98 (48%), Gaps = 21/98 (21%)
Query: 12 RTIPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVT 71
+ PV + V++ PVG+T+ LRA DAD G NG + Y I D
Sbjct: 737 KDTPVEISVNESVPVGTTLLP-LRAKDADHGYNGRIVYVISSGDDD-------------- 781
Query: 72 VVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
S F ++L ++G + + LD E+T +Y++TI A
Sbjct: 782 -----SCFKMDL-YKGNLMLVEPLDRERTPKYVLTITA 813
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 21/86 (24%)
Query: 24 TPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINL 83
T VG I + ++A DAD+GVNG + Y +V + D Y F+I+
Sbjct: 3366 TKVGERILQ-IQATDADSGVNGELSYAVVNASD-------------------YPEFAID- 3404
Query: 84 PHQGQVTVNRSLDFEKTQRYLVTIVA 109
P G V + +SLD E Y +VA
Sbjct: 3405 PQSGVVVLRKSLDRELQSDYYFLVVA 3430
>gi|449269882|gb|EMC80622.1| Protocadherin Fat 1 [Columba livia]
Length = 4590
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 18/86 (20%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
P G+ + + ++ D D+G+NG V Y + PSQ+ +D F+IN+
Sbjct: 2824 PAGTRVIQ-VKGTDLDSGLNGQVTYSLDPSQE----------------LDTIESFTINM- 2865
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVAS 110
G +T + LD EK +Y +T++AS
Sbjct: 2866 ETGWITTLKELDHEKRDKYRITVIAS 2891
>gi|194853658|ref|XP_001968202.1| GG24633 [Drosophila erecta]
gi|190660069|gb|EDV57261.1| GG24633 [Drosophila erecta]
Length = 3556
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 18/98 (18%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIV---PSQDKNIGTADGVGKDRVT 71
P+ ++VS+ TP+G TI N A DAD G NG ++Y ++ P +++ A
Sbjct: 1489 PIDLQVSEATPIG-TIIHNFTATDADTGTNGDLQYRLIRYFPQLNESQEQA--------- 1538
Query: 72 VVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
+ FS++ G +++ LDFE Q YL+ + A
Sbjct: 1539 ----MTLFSMD-SLTGSLSLQAPLDFETVQEYLLIVQA 1571
Score = 35.0 bits (79), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 19/84 (22%)
Query: 26 VGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPH 85
VG+++ + + A D DA NGLVEY I Q D F I+ P
Sbjct: 301 VGTSVLQ-VYASDTDADENGLVEYAINRRQS-----------------DKEQMFRID-PR 341
Query: 86 QGQVTVNRSLDFEKTQRYLVTIVA 109
G + +N++LDFE + + + +VA
Sbjct: 342 TGAIYINKALDFETKELHELVVVA 365
Score = 34.3 bits (77), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 18/94 (19%)
Query: 17 IVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGY 76
+V V + P G+ + + +RAVD D G N + Y IV +D DG+
Sbjct: 1263 VVSVREEQPPGTEVVR-VRAVDRDNGQNASITYSIVKGRDS----------------DGH 1305
Query: 77 SYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
FSI+ P G + LD E+ Y + + AS
Sbjct: 1306 GLFSID-PSSGVIRTRVVLDHEERSIYRLGVAAS 1338
>gi|431904057|gb|ELK09479.1| Protocadherin-21 [Pteropus alecto]
Length = 1249
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 24/97 (24%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P IV++ + TP GS+IFK + AVD D G G V YF+ Q
Sbjct: 527 PYIVQIPEDTPAGSSIFK-VHAVDKDTGSGGSVTYFLQNMQSTK---------------- 569
Query: 75 GYSYFSINLPHQG--QVTVNRSLDFEKTQRYLVTIVA 109
F+++ H G ++ +LD+EK + + VT+VA
Sbjct: 570 ----FAVDH-HSGVLRLRAGNTLDYEKARAHFVTVVA 601
>gi|148224178|ref|NP_001079094.1| cadherin 6, type 2, K-cadherin (fetal kidney) precursor [Xenopus
laevis]
gi|11119970|gb|AAG30810.1|AF263273_1 cadherin-6' [Xenopus laevis]
Length = 792
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 17/92 (18%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
+RV + +PVGS+I K ++A D D G N EY I + N+ + DR T
Sbjct: 277 LRVLESSPVGSSIGK-IKANDTDEGENAETEYHISEGDESNMF---DIITDRDT------ 326
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
+G +TV + LDFEK + Y +T+ A
Sbjct: 327 -------QEGVITVKKPLDFEKKKLYTLTVEA 351
>gi|60279665|ref|NP_001012504.1| protocadherin 15b precursor [Danio rerio]
gi|57471176|gb|AAW50924.1| protocadherin 15b [Danio rerio]
Length = 1907
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 46/97 (47%), Gaps = 19/97 (19%)
Query: 18 VRVSDLTPVGSTIFK----NLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVV 73
V V++LTPVG+TIF N AVD D G NG +EY T +D T
Sbjct: 161 VAVNELTPVGTTIFSGFTGNNGAVDIDDGPNGQIEY-----------TIQYNPRDPTT-- 207
Query: 74 DGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + L++E+ RYLV I A+
Sbjct: 208 --NRTFDIPLTLSGSVVLRERLNYEEITRYLVIIQAN 242
>gi|24580686|ref|NP_523446.2| dachsous [Drosophila melanogaster]
gi|22945533|gb|AAF51468.3| dachsous [Drosophila melanogaster]
Length = 3556
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 20/99 (20%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIV---PSQDKNIGTADGVGK-DRV 70
P+ ++VS+ TPVG TI N A DAD G NG ++Y ++ P +++ A + + D +
Sbjct: 1489 PIDLQVSEATPVG-TIIHNFTATDADTGTNGDLQYRLIRYFPQLNESQEQAMSLFRMDSL 1547
Query: 71 TVVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
T G +++ LDFE Q YL+ + A
Sbjct: 1548 T---------------GALSLQAPLDFEAVQEYLLIVQA 1571
Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 19/84 (22%)
Query: 26 VGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPH 85
VG+++ + + A D DA NGLVEY I Q D F I+ P
Sbjct: 301 VGTSVLQ-VYASDTDADENGLVEYAINRRQS-----------------DKEQMFRID-PR 341
Query: 86 QGQVTVNRSLDFEKTQRYLVTIVA 109
G + +N++LDFE + + + +VA
Sbjct: 342 TGAIYINKALDFETKELHELVVVA 365
>gi|25090185|sp|Q24292.3|DS_DROME RecName: Full=Protein dachsous; AltName: Full=Adherin; Flags:
Precursor
Length = 3503
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 20/99 (20%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIV---PSQDKNIGTADGVGK-DRV 70
P+ ++VS+ TPVG TI N A DAD G NG ++Y ++ P +++ A + + D +
Sbjct: 1436 PIDLQVSEATPVG-TIIHNFTATDADTGTNGDLQYRLIRYFPQLNESQEQAMSLFRMDSL 1494
Query: 71 TVVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
T G +++ LDFE Q YL+ + A
Sbjct: 1495 T---------------GALSLQAPLDFEAVQEYLLIVQA 1518
Score = 35.0 bits (79), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 19/84 (22%)
Query: 26 VGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPH 85
VG+++ + + A D DA NGLVEY I Q D F I+ P
Sbjct: 248 VGTSVLQ-VYASDTDADENGLVEYAINRRQS-----------------DKEQMFRID-PR 288
Query: 86 QGQVTVNRSLDFEKTQRYLVTIVA 109
G + +N++LDFE + + + +VA
Sbjct: 289 TGAIYINKALDFETKELHELVVVA 312
>gi|301621390|ref|XP_002940038.1| PREDICTED: protocadherin gamma-B1-like [Xenopus (Silurana)
tropicalis]
Length = 719
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 49/109 (44%), Gaps = 23/109 (21%)
Query: 7 VSNRKRTIPVI------VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIG 60
+S+ IPV VR+S+ +P+ ST+ + + A D D G+N + Y + D +
Sbjct: 234 ISDANDNIPVFTKEVYKVRISENSPINSTVIR-VNATDKDEGLNSQITYSFSKTSDNQLY 292
Query: 61 TADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
T S F IN P G++ LDFE Q Y +++ A
Sbjct: 293 T---------------SIFDIN-PTNGEIRTTSGLDFETVQNYEISVEA 325
>gi|126272937|ref|XP_001371001.1| PREDICTED: cadherin-related family member 1-like [Monodelphis
domestica]
Length = 861
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 52/97 (53%), Gaps = 24/97 (24%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P I+ V + TP GS+IFK ++A+D D G G V YF+ +N+ + + DR
Sbjct: 141 PYIILVPEDTPAGSSIFK-VQALDKDTGSGGSVTYFL-----QNLHS-NKFTMDR----- 188
Query: 75 GYSYFSINLPHQG--QVTVNRSLDFEKTQRYLVTIVA 109
H G +++V +LD+EK++ + +T++A
Sbjct: 189 ----------HSGVLRISVGATLDYEKSRTHFITVLA 215
>gi|431904134|gb|ELK09556.1| Cadherin-23 [Pteropus alecto]
Length = 1169
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 45/97 (46%), Gaps = 25/97 (25%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEY-FIVPSQDKNIGTADGVGKDRVTVV 73
P VR+ + TPVG+ IF + A D D G G V Y F PSQ I +A G+
Sbjct: 232 PYSVRIPENTPVGTPIFI-VNATDPDLGAGGSVLYSFQPPSQFFAIDSARGI-------- 282
Query: 74 DGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
VTV R LD+E TQ Y +T+ A+
Sbjct: 283 ---------------VTVTRELDYEITQAYQLTVNAT 304
Score = 34.7 bits (78), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Query: 12 RTIPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFI---VPSQDKNIGTADGV 65
+ +P + V + TP G ++++ + AVD D G+NGLV Y + +P D I ++ GV
Sbjct: 920 QNLPFVAEVLEGTPAGVSVYQ-VVAVDLDEGLNGLVSYRMQVGMPRMDFLINSSSGV 975
>gi|194855946|ref|XP_001968648.1| GG24390 [Drosophila erecta]
gi|190660515|gb|EDV57707.1| GG24390 [Drosophila erecta]
Length = 5150
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 21/117 (17%)
Query: 1 LTCTVKVS----NRKRTIPVIVRVSDLTPVGS----TIFKNLRAVDADAGVNGLVEYFIV 52
L+ TVKV+ + +PV V ++ + + T+ ++AVD D G NG ++Y +
Sbjct: 2146 LSSTVKVTILIKDVNDEVPVFVSANETAIMENVAINTVVIAVKAVDNDEGRNGYIDYLMK 2205
Query: 53 PSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
++D++IG +D + FS+N P GQ+ V +LD E YL+ I A
Sbjct: 2206 EARDEDIGQSDPLP------------FSLN-PTDGQLRVVDALDRELRSSYLLNITA 2249
>gi|296192993|ref|XP_002744345.1| PREDICTED: protocadherin beta-13 isoform 1 [Callithrix jacchus]
Length = 798
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 19/92 (20%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V++S+ +PVG + K + A D D GVNG + Y + + D+ +GK
Sbjct: 250 VQISEDSPVGFLVVK-VSATDVDTGVNGEISYSLFQASDE-------IGK---------- 291
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
F IN P G++ + + LDFE Q Y V + A
Sbjct: 292 TFKIN-PLTGEIELKKQLDFENLQSYEVNVEA 322
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 15/68 (22%)
Query: 36 AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSL 95
A D D+G N V Y ++P QD ++ A S SIN P G + RSL
Sbjct: 475 ATDRDSGTNAQVTYSLLPPQDPHLPLA--------------SLVSIN-PDNGHLFALRSL 519
Query: 96 DFEKTQRY 103
D+E Q +
Sbjct: 520 DYEALQAF 527
>gi|449269582|gb|EMC80343.1| Protocadherin Fat 3 [Columba livia]
Length = 4549
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 49/96 (51%), Gaps = 21/96 (21%)
Query: 12 RTIPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVT 71
++ P V+VS+ PVG+TI + ++A DAD+G NG V Y I D N+
Sbjct: 728 KSFPTDVKVSEDLPVGATILR-IKAYDADSGFNGRVLYTI---SDGNVD----------- 772
Query: 72 VVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTI 107
S F+I++ G + V LD EKT YL+ I
Sbjct: 773 -----SCFNIDM-ETGVLNVLMPLDREKTDLYLLNI 802
>gi|317419390|emb|CBN81427.1| Protocadherin-15, partial [Dicentrarchus labrax]
Length = 1994
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 46/97 (47%), Gaps = 19/97 (19%)
Query: 18 VRVSDLTPVGSTIFK----NLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVV 73
V VS+LTPVG+TIF N A D D G NG +EY I + KD T
Sbjct: 123 VAVSELTPVGTTIFSGFWGNNGATDIDDGPNGQIEYTIQYNP-----------KDPTT-- 169
Query: 74 DGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + L++E+ RYLV I A+
Sbjct: 170 --NRTFDIPLTLFGSVVLRERLNYEEITRYLVIIQAN 204
>gi|197097946|ref|NP_001125148.1| cadherin-12 precursor [Pongo abelii]
gi|55727130|emb|CAH90321.1| hypothetical protein [Pongo abelii]
Length = 794
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 17/93 (18%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
++V + +P+GS I + +RAVD D G N +EY IVP N+ D VT D
Sbjct: 276 LKVPESSPIGSAIGR-IRAVDPDFGQNAEIEYNIVPGDGGNLF-------DIVTDEDT-- 325
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+G + + +SLDFE + Y + AS
Sbjct: 326 -------QEGVIKLKKSLDFETKKAYTFKVEAS 351
>gi|198421354|ref|XP_002120352.1| PREDICTED: similar to protocadherin [Ciona intestinalis]
Length = 1024
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 47/95 (49%), Gaps = 12/95 (12%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFI---VPSQDKNIGTADGVGKDRVTVVD 74
V +S+ +P+ T F + A D D NG VE I +P+ T D VG D + D
Sbjct: 381 VYISESSPL-KTFFAYVSAKDNDLESNGEVELMIETFIPT------TRDDVGDDLIKSPD 433
Query: 75 GYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
YS F +N G + V R+LD E RY++ + A
Sbjct: 434 PYSSFVLN--DDGMLGVGRALDRETQPRYVIQVTA 466
>gi|297686900|ref|XP_002820971.1| PREDICTED: protocadherin-15-like [Pongo abelii]
Length = 211
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 43/95 (45%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I + D D D
Sbjct: 48 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYIIQYNPD------DPTSNDT------ 95
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G + + + L++E RY V I A+
Sbjct: 96 ---FEIPLMLTGNIVLRKRLNYEDKTRYFVIIQAN 127
>gi|347543915|gb|AEP02530.1| CDH23, partial [Rousettus leschenaultii]
Length = 3276
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 47/97 (48%), Gaps = 25/97 (25%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEY-FIVPSQDKNIGTADGVGKDRVTVV 73
P VR+ + TPVG+ IF + A D D G G V Y F PSQ
Sbjct: 128 PYSVRIPENTPVGTPIFI-VNATDPDLGAGGSVLYSFQPPSQ------------------ 168
Query: 74 DGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+F+I+ +G VTV R LD+E TQ Y +T+ A+
Sbjct: 169 ----FFAID-SARGIVTVTRELDYEITQAYQLTVNAT 200
Score = 37.7 bits (86), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 40/85 (47%), Gaps = 23/85 (27%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
PVG+ I + A DAD+G L+EY + DG GK FSIN P
Sbjct: 2408 PVGTVILT-VTATDADSGNFALIEYSL----------GDGEGK-----------FSIN-P 2444
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVA 109
G + V SLD EK Y++T +A
Sbjct: 2445 TTGDIYVLSSLDREKKDHYILTALA 2469
Score = 35.0 bits (79), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 21/94 (22%)
Query: 14 IPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVV 73
+P+ V +S+ +PV S+ ++ A DAD+G N L+ + I ++R
Sbjct: 1846 LPMNVTISENSPV-SSFVAHILASDADSGCNALLTFNITAGN-----------RERA--- 1890
Query: 74 DGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTI 107
F+IN G VTVNR LD E+ Y +TI
Sbjct: 1891 -----FAINA-TTGIVTVNRPLDRERIPEYKLTI 1918
Score = 34.7 bits (78), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Query: 12 RTIPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFI---VPSQDKNIGTADGV 65
+ +P + V + TP G ++++ + AVD D G+NGLV Y + +P D I ++ GV
Sbjct: 883 QNLPFVAEVLEGTPAGVSVYQ-VVAVDLDEGLNGLVSYRMQVGMPRMDFLINSSSGV 938
>gi|347543905|gb|AEP02525.1| CDH23, partial [Eonycteris spelaea]
Length = 3276
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 47/97 (48%), Gaps = 25/97 (25%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEY-FIVPSQDKNIGTADGVGKDRVTVV 73
P VR+ + TPVG+ IF + A D D G G V Y F PSQ
Sbjct: 128 PYSVRIPENTPVGTPIFI-VNATDPDLGAGGSVLYSFQPPSQ------------------ 168
Query: 74 DGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+F+I+ +G VTV R LD+E TQ Y +T+ A+
Sbjct: 169 ----FFAID-SARGIVTVTRELDYEITQAYQLTVNAT 200
Score = 38.1 bits (87), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 40/85 (47%), Gaps = 23/85 (27%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
PVG TI + A DAD+G L+EY + DG GK FSIN P
Sbjct: 2408 PVG-TIILTVTATDADSGNFALIEYSL----------GDGEGK-----------FSIN-P 2444
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVA 109
G + V SLD EK Y++T +A
Sbjct: 2445 TTGDIYVLSSLDREKKDHYILTALA 2469
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 21/94 (22%)
Query: 14 IPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVV 73
+P+ V +S+ +PV S+ ++ A DAD+G N L+ + NI T + ++R
Sbjct: 1846 LPMNVTISENSPV-SSFVAHILASDADSGCNALLTF--------NITTGN---RERA--- 1890
Query: 74 DGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTI 107
F+IN G VTVNR LD E+ Y +TI
Sbjct: 1891 -----FAINA-TTGIVTVNRPLDRERIPEYKLTI 1918
>gi|410896278|ref|XP_003961626.1| PREDICTED: protocadherin-15-like [Takifugu rubripes]
Length = 1746
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 45/97 (46%), Gaps = 19/97 (19%)
Query: 18 VRVSDLTPVGSTIFK----NLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVV 73
V VS+LTPVG+TIF N A D D G NG +EY I + N T +
Sbjct: 130 VAVSELTPVGTTIFSGFFGNNGATDIDDGPNGQIEYTI--QYNPNDPTTNKT-------- 179
Query: 74 DGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + L++E RYLV I A+
Sbjct: 180 -----FDIPLTLFGAVVLRERLNYEDITRYLVIIQAN 211
>gi|395820703|ref|XP_003783700.1| PREDICTED: protocadherin-15 isoform 3 [Otolemur garnettii]
Length = 1929
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 41/95 (43%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+T+F A D D G NG +EY I D D
Sbjct: 156 VNELTPVGTTVFTGFSGDNGATDIDDGPNGQIEYVI------QYNPEDPTSNDT------ 203
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L+FE RY V I A+
Sbjct: 204 ---FEIPLMLTGNVVLRKRLNFEDKTRYFVIIQAN 235
>gi|395820727|ref|XP_003783712.1| PREDICTED: protocadherin-15 isoform 15 [Otolemur garnettii]
Length = 1860
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 41/95 (43%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+T+F A D D G NG +EY I D D
Sbjct: 156 VNELTPVGTTVFTGFSGDNGATDIDDGPNGQIEYVI------QYNPEDPTSNDT------ 203
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L+FE RY V I A+
Sbjct: 204 ---FEIPLMLTGNVVLRKRLNFEDKTRYFVIIQAN 235
Score = 34.3 bits (77), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 44/103 (42%), Gaps = 15/103 (14%)
Query: 21 SDLTPVGSTIFKNLRAVDADAGVNGLVEY---------FIVPSQDKNIGTADGV----GK 67
+D+ P S I L AVDAD G NG + Y FI+ I A GV G+
Sbjct: 520 TDMNPGDSVI--QLTAVDADEGSNGEITYDILVGAQGDFIINRTTGLITVAPGVELIVGR 577
Query: 68 DRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
V G +T+ ++LD E T RY++ I AS
Sbjct: 578 TYALTVQAADNAPPAERSTGILTLGKALDRESTDRYILIITAS 620
>gi|395820717|ref|XP_003783707.1| PREDICTED: protocadherin-15 isoform 10 [Otolemur garnettii]
Length = 1926
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 41/95 (43%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+T+F A D D G NG +EY I D D
Sbjct: 156 VNELTPVGTTVFTGFSGDNGATDIDDGPNGQIEYVI------QYNPEDPTSNDT------ 203
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L+FE RY V I A+
Sbjct: 204 ---FEIPLMLTGNVVLRKRLNFEDKTRYFVIIQAN 235
>gi|119574816|gb|EAW54431.1| cadherin-like 23, isoform CRA_e [Homo sapiens]
Length = 430
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 45/97 (46%), Gaps = 25/97 (25%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEY-FIVPSQDKNIGTADGVGKDRVTVV 73
P VR+ + TPVG+ IF + A D D G G V Y F PSQ I +A G+
Sbjct: 181 PYSVRIPENTPVGTPIFI-VNATDPDLGAGGSVLYSFQPPSQFFAIDSARGI-------- 231
Query: 74 DGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
VTV R LD+E TQ Y +T+ A+
Sbjct: 232 ---------------VTVIRELDYETTQAYQLTVNAT 253
>gi|119574814|gb|EAW54429.1| cadherin-like 23, isoform CRA_c [Homo sapiens]
Length = 573
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 45/97 (46%), Gaps = 25/97 (25%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEY-FIVPSQDKNIGTADGVGKDRVTVV 73
P VR+ + TPVG+ IF + A D D G G V Y F PSQ I +A G+
Sbjct: 181 PYSVRIPENTPVGTPIFI-VNATDPDLGAGGSVLYSFQPPSQFFAIDSARGI-------- 231
Query: 74 DGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
VTV R LD+E TQ Y +T+ A+
Sbjct: 232 ---------------VTVIRELDYETTQAYQLTVNAT 253
>gi|449506248|ref|XP_004186131.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-15 [Taeniopygia
guttata]
Length = 2195
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 47/97 (48%), Gaps = 19/97 (19%)
Query: 18 VRVSDLTPVGSTIFK----NLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVV 73
V V++LTPVG+TIF N A+D D G NG +EY I + N T++
Sbjct: 154 VAVNELTPVGTTIFTGFSGNNGAIDIDDGPNGQIEYVI--QYNPNDKTSNRT-------- 203
Query: 74 DGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + L++E+ RY V + A+
Sbjct: 204 -----FDIPLTLSGAVVLRERLNYEEKTRYFVIVQAN 235
>gi|395820721|ref|XP_003783709.1| PREDICTED: protocadherin-15 isoform 12 [Otolemur garnettii]
Length = 1936
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 41/95 (43%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+T+F A D D G NG +EY I D D
Sbjct: 161 VNELTPVGTTVFTGFSGDNGATDIDDGPNGQIEYVI------QYNPEDPTSNDT------ 208
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L+FE RY V I A+
Sbjct: 209 ---FEIPLMLTGNVVLRKRLNFEDKTRYFVIIQAN 240
>gi|284925132|ref|NP_001165403.1| cadherin-23 isoform 5 precursor [Homo sapiens]
gi|146186735|gb|AAI39904.1| CDH23 protein [Homo sapiens]
Length = 406
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 45/97 (46%), Gaps = 25/97 (25%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEY-FIVPSQDKNIGTADGVGKDRVTVV 73
P VR+ + TPVG+ IF + A D D G G V Y F PSQ I +A G+
Sbjct: 136 PYSVRIPENTPVGTPIFI-VNATDPDLGAGGSVLYSFQPPSQFFAIDSARGI-------- 186
Query: 74 DGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
VTV R LD+E TQ Y +T+ A+
Sbjct: 187 ---------------VTVIRELDYETTQAYQLTVNAT 208
>gi|351707599|gb|EHB10518.1| Protocadherin-23 [Heterocephalus glaber]
Length = 3020
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 17/82 (20%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V +++ TPVG F ++A DADAG+ G VEY + DG D V
Sbjct: 330 VTLAEHTPVGH-CFLQVQASDADAGLYGCVEYSLY----------DGFQSDEAPPV---- 374
Query: 78 YFSINLPHQGQVTVNRSLDFEK 99
F I+ PH GQ+ V++ LD E+
Sbjct: 375 -FQID-PHTGQICVSQDLDRER 394
>gi|395820719|ref|XP_003783708.1| PREDICTED: protocadherin-15 isoform 11 [Otolemur garnettii]
Length = 1931
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 41/95 (43%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+T+F A D D G NG +EY I D D
Sbjct: 156 VNELTPVGTTVFTGFSGDNGATDIDDGPNGQIEYVI------QYNPEDPTSNDT------ 203
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L+FE RY V I A+
Sbjct: 204 ---FEIPLMLTGNVVLRKRLNFEDKTRYFVIIQAN 235
>gi|395820709|ref|XP_003783703.1| PREDICTED: protocadherin-15 isoform 6 [Otolemur garnettii]
Length = 1906
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 41/95 (43%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+T+F A D D G NG +EY I D D
Sbjct: 134 VNELTPVGTTVFTGFSGDNGATDIDDGPNGQIEYVI------QYNPEDPTSNDT------ 181
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L+FE RY V I A+
Sbjct: 182 ---FEIPLMLTGNVVLRKRLNFEDKTRYFVIIQAN 213
>gi|262263251|tpg|DAA06628.1| TPA_inf: protocadherin gamma c5 isoform [Anolis carolinensis]
Length = 950
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 18/85 (21%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
PVGS IFK L A D D G NG ++Y I T+D + K F ++ P
Sbjct: 256 PVGSLIFK-LNASDPDEGSNGEIQYSF------GIHTSDSIQK----------LFGLD-P 297
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVA 109
H G++ V +DFE++ Y + + A
Sbjct: 298 HTGEIYVQEIVDFEESHFYELHVRA 322
>gi|395820711|ref|XP_003783704.1| PREDICTED: protocadherin-15 isoform 7 [Otolemur garnettii]
Length = 1909
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 41/95 (43%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+T+F A D D G NG +EY I D D
Sbjct: 134 VNELTPVGTTVFTGFSGDNGATDIDDGPNGQIEYVI------QYNPEDPTSNDT------ 181
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L+FE RY V I A+
Sbjct: 182 ---FEIPLMLTGNVVLRKRLNFEDKTRYFVIIQAN 213
>gi|395820699|ref|XP_003783698.1| PREDICTED: protocadherin-15 isoform 1 [Otolemur garnettii]
Length = 1676
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 41/95 (43%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+T+F A D D G NG +EY I D D
Sbjct: 156 VNELTPVGTTVFTGFSGDNGATDIDDGPNGQIEYVI------QYNPEDPTSNDT------ 203
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L+FE RY V I A+
Sbjct: 204 ---FEIPLMLTGNVVLRKRLNFEDKTRYFVIIQAN 235
>gi|156361305|ref|XP_001625458.1| predicted protein [Nematostella vectensis]
gi|156212293|gb|EDO33358.1| predicted protein [Nematostella vectensis]
Length = 479
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 22/90 (24%)
Query: 20 VSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYF 79
V + +PVG+T K ++A+D D G N +EY I N
Sbjct: 289 VRENSPVGTTAIK-VQAIDTDTGSNAKIEYIIASGNTNN--------------------- 326
Query: 80 SINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
S ++ + G VTVN+++DFE + Y +TI+A
Sbjct: 327 SFDIDNHGFVTVNKAIDFETRKIYNLTIMA 356
>gi|109089755|ref|XP_001098443.1| PREDICTED: protocadherin-15 isoform 1 [Macaca mulatta]
Length = 1953
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 43/95 (45%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I + D D D
Sbjct: 156 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQYNPD------DPTSNDT------ 203
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E RY V I A+
Sbjct: 204 ---FEIPLMLTGNVVLRKRLNYEDKTRYFVIIQAN 235
>gi|426252711|ref|XP_004020046.1| PREDICTED: protocadherin-15 [Ovis aries]
Length = 1884
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 43/95 (45%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I + D D D
Sbjct: 156 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQYNPD------DPTSNDT------ 203
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E RY V I A+
Sbjct: 204 ---FEIPLMLTGNVVLRKRLNYEDKTRYFVIIQAN 235
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 51/127 (40%), Gaps = 22/127 (17%)
Query: 4 TVKVSNRKRTIPVIVRVS-------DLTPVGSTIFKNLRAVDADAGVNGLVEY------- 49
T++V + P +S D+ P S I L AVDAD G NG + Y
Sbjct: 496 TIRVMDANDNTPTFPEISYDVYVYTDMNPGDSVI--QLTAVDADEGSNGEITYEILVGAQ 553
Query: 50 --FIVPSQDKNIGTADGV----GKDRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQRY 103
FI+ I A GV G+ V G +T+ ++LD E T RY
Sbjct: 554 GDFIINKTTGLITVAPGVELMVGRTYALTVQAADNAPPAERSTGILTLGKALDRESTDRY 613
Query: 104 LVTIVAS 110
++ I AS
Sbjct: 614 ILIITAS 620
>gi|297301374|ref|XP_002805775.1| PREDICTED: protocadherin-15 isoform 6 [Macaca mulatta]
Length = 1950
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 43/95 (45%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I + D D D
Sbjct: 156 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQYNPD------DPTSNDT------ 203
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E RY V I A+
Sbjct: 204 ---FEIPLMLTGNVVLRKRLNYEDKTRYFVIIQAN 235
>gi|126330664|ref|XP_001369066.1| PREDICTED: protocadherin Fat 4 [Monodelphis domestica]
Length = 4980
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 44/93 (47%), Gaps = 22/93 (23%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V +S+ PV S FK ++A D D+G NG + Y IV + N G A G+ D
Sbjct: 1001 VTLSEAQPVNSLFFK-VQASDQDSGANGEIAYSIV---EGNTGNAFGIFPD--------- 1047
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
GQ+ V LD E RY++ +VAS
Sbjct: 1048 ---------GQLYVKSELDRELQDRYVLVVVAS 1071
>gi|395820713|ref|XP_003783705.1| PREDICTED: protocadherin-15 isoform 8 [Otolemur garnettii]
Length = 1674
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 41/95 (43%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+T+F A D D G NG +EY I D D
Sbjct: 156 VNELTPVGTTVFTGFSGDNGATDIDDGPNGQIEYVI------QYNPEDPTSNDT------ 203
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L+FE RY V I A+
Sbjct: 204 ---FEIPLMLTGNVVLRKRLNFEDKTRYFVIIQAN 235
>gi|296472886|tpg|DAA15001.1| TPA: protocadherin-related 15 isoform 3 [Bos taurus]
Length = 1681
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 43/95 (45%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I + D D D
Sbjct: 161 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQYNPD------DPTSNDT------ 208
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E RY V I A+
Sbjct: 209 ---FEIPLMLTGNVVLRKRLNYEDKTRYFVIIQAN 240
>gi|395820723|ref|XP_003783710.1| PREDICTED: protocadherin-15 isoform 13 [Otolemur garnettii]
Length = 1683
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 41/95 (43%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+T+F A D D G NG +EY I D D
Sbjct: 156 VNELTPVGTTVFTGFSGDNGATDIDDGPNGQIEYVI------QYNPEDPTSNDT------ 203
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L+FE RY V I A+
Sbjct: 204 ---FEIPLMLTGNVVLRKRLNFEDKTRYFVIIQAN 235
>gi|395820701|ref|XP_003783699.1| PREDICTED: protocadherin-15 isoform 2 [Otolemur garnettii]
Length = 1681
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 41/95 (43%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+T+F A D D G NG +EY I D D
Sbjct: 161 VNELTPVGTTVFTGFSGDNGATDIDDGPNGQIEYVI------QYNPEDPTSNDT------ 208
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L+FE RY V I A+
Sbjct: 209 ---FEIPLMLTGNVVLRKRLNFEDKTRYFVIIQAN 240
>gi|347543895|gb|AEP02520.1| PCDH15, partial [Cynopterus sphinx]
Length = 1902
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 43/95 (45%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I + D D D
Sbjct: 144 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQYNPD------DPTSNDT------ 191
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E RY V I A+
Sbjct: 192 ---FEIPLMLTGNVVLRKRLNYEDKTRYFVIIQAN 223
>gi|296472885|tpg|DAA15000.1| TPA: protocadherin-related 15 isoform 2 [Bos taurus]
Length = 1676
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 43/95 (45%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I + D D D
Sbjct: 156 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQYNPD------DPTSNDT------ 203
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E RY V I A+
Sbjct: 204 ---FEIPLMLTGNVVLRKRLNYEDKTRYFVIIQAN 235
>gi|37182356|gb|AAQ88980.1| CDH23 [Homo sapiens]
Length = 530
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 45/97 (46%), Gaps = 25/97 (25%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEY-FIVPSQDKNIGTADGVGKDRVTVV 73
P VR+ + TPVG+ IF + A D D G G V Y F PSQ I +A G+
Sbjct: 136 PYSVRIPENTPVGTPIFI-VNATDPDLGAGGSVLYSFQPPSQFFAIDSARGI-------- 186
Query: 74 DGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
VTV R LD+E TQ Y +T+ A+
Sbjct: 187 ---------------VTVIRELDYETTQAYQLTVNAT 208
>gi|297301370|ref|XP_002805773.1| PREDICTED: protocadherin-15 isoform 4 [Macaca mulatta]
Length = 1675
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 43/95 (45%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I + D D D
Sbjct: 156 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQYNPD------DPTSNDT------ 203
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E RY V I A+
Sbjct: 204 ---FEIPLMLTGNVVLRKRLNYEDKTRYFVIIQAN 235
>gi|395820705|ref|XP_003783701.1| PREDICTED: protocadherin-15 isoform 4 [Otolemur garnettii]
Length = 1795
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 41/95 (43%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+T+F A D D G NG +EY I D D
Sbjct: 161 VNELTPVGTTVFTGFSGDNGATDIDDGPNGQIEYVI------QYNPEDPTSNDT------ 208
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L+FE RY V I A+
Sbjct: 209 ---FEIPLMLTGNVVLRKRLNFEDKTRYFVIIQAN 240
>gi|390472322|ref|XP_002807487.2| PREDICTED: LOW QUALITY PROTEIN: cadherin-23 [Callithrix jacchus]
Length = 3348
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 45/97 (46%), Gaps = 25/97 (25%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEY-FIVPSQDKNIGTADGVGKDRVTVV 73
P VR+ + TPVG+ IF + A D D G G V Y F PSQ I +A G+
Sbjct: 136 PYSVRIPENTPVGTPIFI-VNATDPDLGAGGSVLYSFQPPSQFFTIDSARGI-------- 186
Query: 74 DGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
VTV R LD+E TQ Y +T+ A+
Sbjct: 187 ---------------VTVIRELDYETTQAYQLTVNAT 208
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Query: 12 RTIPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFI---VPSQDKNIGTADGV 65
+ +P + V + TP G +I++ + AVD D G+NGLV Y + +P D I ++ GV
Sbjct: 889 QNLPFVAEVLEGTPAGVSIYQ-VVAVDLDEGLNGLVSYRMQVAMPRMDFLINSSSGV 944
>gi|296472887|tpg|DAA15002.1| TPA: protocadherin-related 15 isoform 4 [Bos taurus]
Length = 1537
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 43/95 (45%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I + D D D
Sbjct: 156 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQYNPD------DPTSNDT------ 203
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E RY V I A+
Sbjct: 204 ---FEIPLMLTGNVVLRKRLNYEDKTRYFVIIQAN 235
>gi|403260248|ref|XP_003922589.1| PREDICTED: protocadherin-15 [Saimiri boliviensis boliviensis]
Length = 1869
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 43/95 (45%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I + D D D
Sbjct: 48 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQYNPD------DPTSNDT------ 95
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E RY V I A+
Sbjct: 96 ---FEIPLMLTGNVVLRKRLNYEDKTRYFVIIQAN 127
>gi|297301372|ref|XP_002805774.1| PREDICTED: protocadherin-15 isoform 5 [Macaca mulatta]
Length = 1680
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 43/95 (45%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I + D D D
Sbjct: 161 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQYNPD------DPTSNDT------ 208
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E RY V I A+
Sbjct: 209 ---FEIPLMLTGNVVLRKRLNYEDKTRYFVIIQAN 240
>gi|16507964|ref|NP_443068.1| cadherin-23 isoform 2 precursor [Homo sapiens]
gi|54035160|gb|AAH11570.1| Cadherin-like 23 [Homo sapiens]
gi|229597137|gb|AAI36977.1| Cadherin-like 23 [Homo sapiens]
gi|229597167|gb|AAI36978.1| Cadherin-like 23 [Homo sapiens]
Length = 530
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 45/97 (46%), Gaps = 25/97 (25%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEY-FIVPSQDKNIGTADGVGKDRVTVV 73
P VR+ + TPVG+ IF + A D D G G V Y F PSQ I +A G+
Sbjct: 136 PYSVRIPENTPVGTPIFI-VNATDPDLGAGGSVLYSFQPPSQFFAIDSARGI-------- 186
Query: 74 DGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
VTV R LD+E TQ Y +T+ A+
Sbjct: 187 ---------------VTVIRELDYETTQAYQLTVNAT 208
>gi|395820715|ref|XP_003783706.1| PREDICTED: protocadherin-15 isoform 9 [Otolemur garnettii]
Length = 1788
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 41/95 (43%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+T+F A D D G NG +EY I D D
Sbjct: 156 VNELTPVGTTVFTGFSGDNGATDIDDGPNGQIEYVI------QYNPEDPTSNDT------ 203
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L+FE RY V I A+
Sbjct: 204 ---FEIPLMLTGNVVLRKRLNFEDKTRYFVIIQAN 235
>gi|395820707|ref|XP_003783702.1| PREDICTED: protocadherin-15 isoform 5 [Otolemur garnettii]
Length = 1790
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 41/95 (43%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+T+F A D D G NG +EY I D D
Sbjct: 156 VNELTPVGTTVFTGFSGDNGATDIDDGPNGQIEYVI------QYNPEDPTSNDT------ 203
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L+FE RY V I A+
Sbjct: 204 ---FEIPLMLTGNVVLRKRLNFEDKTRYFVIIQAN 235
>gi|347543897|gb|AEP02521.1| PCDH15, partial [Chaerephon plicatus]
Length = 1918
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 43/95 (45%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I + D D D
Sbjct: 149 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQYNPD------DPTSNDT------ 196
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E RY V I A+
Sbjct: 197 ---FEIPLMLTGNVVLRKRLNYEDKTRYFVIIQAN 228
>gi|297301366|ref|XP_002805771.1| PREDICTED: protocadherin-15 isoform 2 [Macaca mulatta]
Length = 1783
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 43/95 (45%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I + D D D
Sbjct: 156 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQYNPD------DPTSNDT------ 203
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E RY V I A+
Sbjct: 204 ---FEIPLMLTGNVVLRKRLNYEDKTRYFVIIQAN 235
>gi|198415281|ref|XP_002124308.1| PREDICTED: similar to FAT tumor suppressor homolog 4, partial
[Ciona intestinalis]
Length = 2620
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 48/93 (51%), Gaps = 22/93 (23%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGK-DRVTVVDGY 76
R+S+ PVGS + N+ A D D G+NG V+Y IV G K D++ VD Y
Sbjct: 185 ARISEDLPVGSLVI-NIEARDMDDGLNGKVKYKIV-----------GFDKPDQLFTVDAY 232
Query: 77 SYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
+ G + + +LD+E+T +LVTI A
Sbjct: 233 T---------GSIYLVGNLDYEQTPNHLVTIEA 256
>gi|291222991|ref|XP_002731484.1| PREDICTED: protocadherin-15-CD1-like [Saccoglossus kowalevskii]
Length = 1577
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 18/96 (18%)
Query: 14 IPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVV 73
+P VS+L VG+ IF+ + A D D+G G V Y+I P+ D
Sbjct: 146 LPYHTAVSELEDVGTIIFR-VSAEDPDSG--GAVSYYIRPNPDD---------------P 187
Query: 74 DGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
+ FSI+LP G + + ++LD+E + + + + A
Sbjct: 188 ESNESFSISLPSIGDIKLTKTLDYESKKEWRILVEA 223
>gi|195342415|ref|XP_002037796.1| GM18102 [Drosophila sechellia]
gi|194132646|gb|EDW54214.1| GM18102 [Drosophila sechellia]
Length = 3033
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 59/117 (50%), Gaps = 21/117 (17%)
Query: 1 LTCTVKVS----NRKRTIPVIVRVSDLTPVGS----TIFKNLRAVDADAGVNGLVEYFIV 52
L+ TVKV+ + +PV V ++ + + T+ ++AVD D G NG ++Y +
Sbjct: 2144 LSSTVKVTILIKDVNDEVPVFVSANETAIMENVAINTVVIAVKAVDNDEGRNGYIDYLMK 2203
Query: 53 PSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
++D+++G +D + FS+N P GQ+ V +LD E YL+ I A
Sbjct: 2204 EARDEDMGQSDPLP------------FSLN-PTDGQLRVVDALDRELRSSYLLNITA 2247
>gi|297301368|ref|XP_002805772.1| PREDICTED: protocadherin-15 isoform 3 [Macaca mulatta]
Length = 1788
Score = 42.0 bits (97), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 43/95 (45%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I + D D D
Sbjct: 161 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQYNPD------DPTSNDT------ 208
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E RY V I A+
Sbjct: 209 ---FEIPLMLTGNVVLRKRLNYEDKTRYFVIIQAN 240
>gi|395820915|ref|XP_003783801.1| PREDICTED: LOW QUALITY PROTEIN: cadherin-23 [Otolemur garnettii]
Length = 3351
Score = 42.0 bits (97), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 47/97 (48%), Gaps = 25/97 (25%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEY-FIVPSQDKNIGTADGVGKDRVTVV 73
P VR+ + TPVG+ IF + A D D G G V Y F PSQ
Sbjct: 136 PYSVRIPENTPVGTPIFI-VNATDPDLGAGGSVLYSFQPPSQ------------------ 176
Query: 74 DGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+F+I+ +G VTV R LD+E TQ Y +T+ A+
Sbjct: 177 ----FFAID-SARGIVTVIRELDYETTQAYQLTVNAT 208
Score = 35.4 bits (80), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Query: 12 RTIPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFI---VPSQDKNIGTADGV 65
+ +P + V + TP G ++++ L A+D D G+NGLV Y + +P D I ++ GV
Sbjct: 891 QNLPFVAEVLEGTPAGVSVYQVL-AIDLDEGLNGLVSYRMQVGMPRMDFLINSSSGV 946
Score = 34.7 bits (78), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 18/94 (19%)
Query: 17 IVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGY 76
I+ + + P+ S +++ + A D D G+NG V Y + K G D +
Sbjct: 2616 ILHIREEIPLRSNVYE-VYATDKDEGLNGAVRYSFL----KTAGNRD------------W 2658
Query: 77 SYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
YF+I+ P G + + LD EK Y + +VAS
Sbjct: 2659 EYFTID-PISGLIQTTQRLDREKQAVYSLILVAS 2691
>gi|296472884|tpg|DAA14999.1| TPA: protocadherin-related 15 isoform 1 [Bos taurus]
Length = 1789
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 43/95 (45%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I + D D D
Sbjct: 161 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQYNPD------DPTSNDT------ 208
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E RY V I A+
Sbjct: 209 ---FEIPLMLTGNVVLRKRLNYEDKTRYFVIIQAN 240
>gi|441600758|ref|XP_004087637.1| PREDICTED: protocadherin-15 isoform 1 [Nomascus leucogenys]
Length = 1674
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 43/95 (45%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I + D D D
Sbjct: 156 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQYNSD------DPTSNDT------ 203
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G + + + L++E RY V I A+
Sbjct: 204 ---FEIPLMLTGNIVLRKRLNYEDKTRYFVIIQAN 235
>gi|344275013|ref|XP_003409308.1| PREDICTED: protocadherin-15 isoform 2 [Loxodonta africana]
Length = 1945
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 43/95 (45%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I + D D D
Sbjct: 161 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQHNPD------DLTSNDT------ 208
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E RY V I A+
Sbjct: 209 ---FEIPLMLTGNVVLRKRLNYEDKTRYFVIIQAN 240
>gi|345791455|ref|XP_851607.2| PREDICTED: protocadherin-15 isoform 3 [Canis lupus familiaris]
Length = 1678
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 43/95 (45%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I + D D D
Sbjct: 156 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQYNPD------DPTSNDT------ 203
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E RY V I A+
Sbjct: 204 ---FEIPLMLTGNVVLRKRLNYEDKTRYFVIIQAN 235
>gi|344275023|ref|XP_003409313.1| PREDICTED: protocadherin-15 isoform 7 [Loxodonta africana]
Length = 1918
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 43/95 (45%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I + D D D
Sbjct: 134 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQHNPD------DLTSNDT------ 181
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E RY V I A+
Sbjct: 182 ---FEIPLMLTGNVVLRKRLNYEDKTRYFVIIQAN 213
>gi|402880813|ref|XP_003903984.1| PREDICTED: protocadherin-15, partial [Papio anubis]
Length = 655
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 43/95 (45%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I + D D D
Sbjct: 103 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQYNPD------DPTSNDT------ 150
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E RY V I A+
Sbjct: 151 ---FEIPLMLTGNVVLRKRLNYEDKTRYFVIIQAN 182
>gi|402880536|ref|XP_003903856.1| PREDICTED: cadherin-23 [Papio anubis]
Length = 3354
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 47/97 (48%), Gaps = 25/97 (25%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEY-FIVPSQDKNIGTADGVGKDRVTVV 73
P VR+ + TPVG+ IF + A D D G G V Y F PSQ
Sbjct: 136 PYSVRIPENTPVGTPIFI-VNATDPDLGAGGSVLYSFQPPSQ------------------ 176
Query: 74 DGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+F+I+ +G VTV R LD+E TQ Y +T+ A+
Sbjct: 177 ----FFAID-SARGIVTVIRELDYETTQAYQLTVNAT 208
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 40/85 (47%), Gaps = 23/85 (27%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
PVG+ I + A DAD+G L+EY + DG GK F+IN P
Sbjct: 2416 PVGTVILT-VTATDADSGNFALIEYSL----------GDGEGK-----------FAIN-P 2452
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVA 109
G + V SLD EK Y++T +A
Sbjct: 2453 TTGDIYVLSSLDREKKDHYILTALA 2477
>gi|348576082|ref|XP_003473816.1| PREDICTED: cadherin-23-like [Cavia porcellus]
Length = 3354
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 47/97 (48%), Gaps = 25/97 (25%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEY-FIVPSQDKNIGTADGVGKDRVTVV 73
P VR+ + TPVG+ IF + A D D G G V Y F PSQ
Sbjct: 136 PYSVRIPENTPVGTPIFI-VNATDPDLGAGGSVLYSFQPPSQ------------------ 176
Query: 74 DGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+F+I+ +G VTV R LD+E TQ Y +T+ A+
Sbjct: 177 ----FFAID-SARGIVTVIRELDYETTQAYQLTVNAT 208
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 40/85 (47%), Gaps = 23/85 (27%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
PVG+ I + A DAD+G L+EY + DG GK F+IN P
Sbjct: 2416 PVGTVILT-VTATDADSGNFALIEYSL----------GDGEGK-----------FAIN-P 2452
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVA 109
G + V SLD EK Y++T +A
Sbjct: 2453 ITGDIYVLSSLDREKKDHYILTALA 2477
>gi|344275017|ref|XP_003409310.1| PREDICTED: protocadherin-15 isoform 4 [Loxodonta africana]
Length = 1869
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 43/95 (45%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I + D D D
Sbjct: 156 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQHNPD------DLTSNDT------ 203
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E RY V I A+
Sbjct: 204 ---FEIPLMLTGNVVLRKRLNYEDKTRYFVIIQAN 235
>gi|344275015|ref|XP_003409309.1| PREDICTED: protocadherin-15 isoform 3 [Loxodonta africana]
Length = 1940
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 43/95 (45%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I + D D D
Sbjct: 156 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQHNPD------DLTSNDT------ 203
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E RY V I A+
Sbjct: 204 ---FEIPLMLTGNVVLRKRLNYEDKTRYFVIIQAN 235
>gi|284925128|ref|NP_001165401.1| cadherin-23 isoform 3 precursor [Homo sapiens]
Length = 1381
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 47/97 (48%), Gaps = 25/97 (25%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEY-FIVPSQDKNIGTADGVGKDRVTVV 73
P VR+ + TPVG+ IF + A D D G G V Y F PSQ
Sbjct: 136 PYSVRIPENTPVGTPIFI-VNATDPDLGAGGSVLYSFQPPSQ------------------ 176
Query: 74 DGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+F+I+ +G VTV R LD+E TQ Y +T+ A+
Sbjct: 177 ----FFAID-SARGIVTVIRELDYETTQAYQLTVNAT 208
>gi|426256116|ref|XP_004023263.1| PREDICTED: LOW QUALITY PROTEIN: cadherin-23 [Ovis aries]
Length = 1397
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 47/97 (48%), Gaps = 25/97 (25%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEY-FIVPSQDKNIGTADGVGKDRVTVV 73
P VR+ + TPVG+ IF + A D D G G V Y F PSQ
Sbjct: 138 PYSVRIPENTPVGTPIFI-VNATDPDLGAGGSVLYSFQPPSQ------------------ 178
Query: 74 DGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+F+I+ +G VTV R LD+E TQ Y +T+ A+
Sbjct: 179 ----FFAID-SARGIVTVIRELDYETTQAYQLTVNAT 210
Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Query: 12 RTIPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFI---VPSQDKNIGTADGV 65
+ +P + V + TP G ++++ + A+D D G+NGLV Y + +P D I ++ GV
Sbjct: 893 QNLPFVAEVLEGTPAGVSVYQ-VAAIDLDEGLNGLVSYRMQVGMPRMDFVINSSSGV 948
>gi|403273767|ref|XP_003928672.1| PREDICTED: cadherin-23 [Saimiri boliviensis boliviensis]
Length = 3354
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 45/96 (46%), Gaps = 23/96 (23%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P VR+ + TPVG+ IF + A D D G G V Y PS
Sbjct: 136 PYSVRIPENTPVGTPIFI-VNATDPDLGAGGSVLYSFQPSS------------------- 175
Query: 75 GYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+F+I+ +G VTV R LD+E TQ Y +T+ A+
Sbjct: 176 --QFFAID-SARGIVTVIRELDYETTQAYQLTVNAT 208
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 40/85 (47%), Gaps = 23/85 (27%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
PVG TI + A DAD+G L+EY + DG GK F+IN P
Sbjct: 2416 PVG-TIILTVTATDADSGNFALIEYSL----------GDGEGK-----------FAIN-P 2452
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVA 109
G + V SLD EK Y++T +A
Sbjct: 2453 TTGDIYVLSSLDREKKDHYILTALA 2477
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Query: 12 RTIPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFI---VPSQDKNIGTADGV 65
+ +P + V + TP G +I++ + AVD D G+NGLV Y + +P D I ++ GV
Sbjct: 891 QNLPFVAEVLEGTPAGVSIYQ-VVAVDLDEGLNGLVSYRMQVAMPRMDFLINSSSGV 946
>gi|345791459|ref|XP_003433494.1| PREDICTED: protocadherin-15 isoform 2 [Canis lupus familiaris]
Length = 1797
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 43/95 (45%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I + D D D
Sbjct: 161 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQYNPD------DPTSNDT------ 208
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E RY V I A+
Sbjct: 209 ---FEIPLMLTGNVVLRKRLNYEDKTRYFVIIQAN 240
>gi|444512234|gb|ELV10086.1| Cadherin-23 [Tupaia chinensis]
Length = 3381
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 47/97 (48%), Gaps = 25/97 (25%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEY-FIVPSQDKNIGTADGVGKDRVTVV 73
P VR+ + TPVG+ IF + A D D G G V Y F PSQ
Sbjct: 110 PYSVRIPENTPVGTPIFI-VNATDPDLGAGGSVLYSFQPPSQ------------------ 150
Query: 74 DGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+F+I+ +G VTV R LD+E TQ Y +T+ A+
Sbjct: 151 ----FFAID-SARGIVTVIRELDYETTQAYQLTVNAT 182
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 40/85 (47%), Gaps = 23/85 (27%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
PVG+ I + A DAD+G L+EY + DG GK F+IN P
Sbjct: 2386 PVGTVILT-VTATDADSGNFALIEYSL----------GDGEGK-----------FAIN-P 2422
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVA 109
G + V SLD EK Y++T +A
Sbjct: 2423 TTGDIYVLSSLDREKKNHYILTALA 2447
Score = 34.7 bits (78), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 21/94 (22%)
Query: 14 IPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVV 73
+P+ V +S+ +PV S+ ++ A DAD+G N L+ + I ++R ++
Sbjct: 1824 LPMNVTISENSPV-SSFVAHVLASDADSGCNALLTFNITAGN-----------RERAFII 1871
Query: 74 DGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTI 107
+ + G VTVNR LD E+ Y +TI
Sbjct: 1872 NATT---------GIVTVNRPLDRERIPEYKLTI 1896
>gi|441600767|ref|XP_004087640.1| PREDICTED: protocadherin-15 isoform 4 [Nomascus leucogenys]
Length = 1789
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 43/95 (45%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I + D D D
Sbjct: 161 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQYNSD------DPTSNDT------ 208
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G + + + L++E RY V I A+
Sbjct: 209 ---FEIPLMLTGNIVLRKRLNYEDKTRYFVIIQAN 240
>gi|441600764|ref|XP_004087639.1| PREDICTED: protocadherin-15 isoform 3 [Nomascus leucogenys]
Length = 1681
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 43/95 (45%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I + D D D
Sbjct: 161 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQYNSD------DPTSNDT------ 208
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G + + + L++E RY V I A+
Sbjct: 209 ---FEIPLMLTGNIVLRKRLNYEDKTRYFVIIQAN 240
>gi|12060937|gb|AAG48303.1|AF312024_1 cadherin related 23 [Homo sapiens]
gi|18077851|gb|AAG27034.2| cadherin 23 [Homo sapiens]
Length = 3354
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 47/97 (48%), Gaps = 25/97 (25%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEY-FIVPSQDKNIGTADGVGKDRVTVV 73
P VR+ + TPVG+ IF + A D D G G V Y F PSQ
Sbjct: 136 PYSVRIPENTPVGTPIFI-VNATDPDLGAGGSVLYSFQPPSQ------------------ 176
Query: 74 DGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+F+I+ +G VTV R LD+E TQ Y +T+ A+
Sbjct: 177 ----FFAID-SARGIVTVIRELDYETTQAYQLTVNAT 208
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 40/85 (47%), Gaps = 23/85 (27%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
PVG TI + A DAD+G L+EY ++ DG S F+IN P
Sbjct: 2416 PVG-TIILTVTATDADSGNFALIEY---------------------SLGDGESKFAIN-P 2452
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVA 109
G + V SLD EK Y++T +A
Sbjct: 2453 TTGDIYVLSSLDREKKDHYILTALA 2477
>gi|410169834|ref|XP_003960910.1| PREDICTED: cadherin-23-like [Homo sapiens]
Length = 1381
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 47/97 (48%), Gaps = 25/97 (25%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEY-FIVPSQDKNIGTADGVGKDRVTVV 73
P VR+ + TPVG+ IF + A D D G G V Y F PSQ
Sbjct: 136 PYSVRIPENTPVGTPIFI-VNATDPDLGAGGSVLYSFQPPSQ------------------ 176
Query: 74 DGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+F+I+ +G VTV R LD+E TQ Y +T+ A+
Sbjct: 177 ----FFAID-SARGIVTVIRELDYETTQAYQLTVNAT 208
>gi|345791457|ref|XP_003433493.1| PREDICTED: protocadherin-15 isoform 1 [Canis lupus familiaris]
Length = 1683
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 43/95 (45%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I + D D D
Sbjct: 161 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQYNPD------DPTSNDT------ 208
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E RY V I A+
Sbjct: 209 ---FEIPLMLTGNVVLRKRLNYEDKTRYFVIIQAN 240
>gi|344275011|ref|XP_003409307.1| PREDICTED: protocadherin-15 isoform 1 [Loxodonta africana]
Length = 1938
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 43/95 (45%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I + D D D
Sbjct: 156 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQHNPD------DLTSNDT------ 203
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E RY V I A+
Sbjct: 204 ---FEIPLMLTGNVVLRKRLNYEDKTRYFVIIQAN 235
>gi|327265474|ref|XP_003217533.1| PREDICTED: protocadherin Fat 2-like, partial [Anolis carolinensis]
Length = 2916
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 46/98 (46%), Gaps = 23/98 (23%)
Query: 12 RTIPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVT 71
+P + + D T G IF+ + A D D+G NG++ Y +
Sbjct: 637 ENVPYYIAIQDGTEPGDVIFQ-VSATDKDSGNNGVIFY---------------------S 674
Query: 72 VVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
V+ Y YF I+ P+ G +++ + LDF+ +Y++ + A
Sbjct: 675 FVEDYKYFWID-PYLGDISLKKPLDFQALNKYILRVTA 711
Score = 34.3 bits (77), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 21/93 (22%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V D PVG+ + + +RA+D D GVN + Y + + +
Sbjct: 128 AEVLDAAPVGTEVVQ-VRALDQDQGVNAEIHYNLEAGNNGD------------------- 167
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+F+IN+ G +TV++ L K +R+ +T+ A
Sbjct: 168 FFTINM-FSGIITVSQKLHHSKQERFTLTVKAE 199
>gi|311271574|ref|XP_001924567.2| PREDICTED: protocadherin-15 isoform 1 [Sus scrofa]
Length = 1948
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 43/95 (45%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I + D D D
Sbjct: 156 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQYNPD------DPTSNDT------ 203
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G + + + L++E RY V I A+
Sbjct: 204 ---FEIPLMLTGNIVLRKRLNYEDKTRYFVIIQAN 235
>gi|311271572|ref|XP_003133181.1| PREDICTED: protocadherin-15 isoform 6 [Sus scrofa]
Length = 1950
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 43/95 (45%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I + D D D
Sbjct: 156 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQYNPD------DPTSNDT------ 203
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G + + + L++E RY V I A+
Sbjct: 204 ---FEIPLMLTGNIVLRKRLNYEDKTRYFVIIQAN 235
>gi|189571674|ref|NP_071407.4| cadherin-23 isoform 1 precursor [Homo sapiens]
gi|408359994|sp|Q9H251.2|CAD23_HUMAN RecName: Full=Cadherin-23; AltName: Full=Otocadherin; Flags:
Precursor
Length = 3354
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 47/97 (48%), Gaps = 25/97 (25%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEY-FIVPSQDKNIGTADGVGKDRVTVV 73
P VR+ + TPVG+ IF + A D D G G V Y F PSQ
Sbjct: 136 PYSVRIPENTPVGTPIFI-VNATDPDLGAGGSVLYSFQPPSQ------------------ 176
Query: 74 DGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+F+I+ +G VTV R LD+E TQ Y +T+ A+
Sbjct: 177 ----FFAID-SARGIVTVIRELDYETTQAYQLTVNAT 208
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 40/85 (47%), Gaps = 23/85 (27%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
PVG TI + A DAD+G L+EY ++ DG S F+IN P
Sbjct: 2416 PVG-TIILTVTATDADSGNFALIEY---------------------SLGDGESKFAIN-P 2452
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVA 109
G + V SLD EK Y++T +A
Sbjct: 2453 TTGDIYVLSSLDREKKDHYILTALA 2477
>gi|40807027|gb|AAH65284.1| CDH23 protein [Homo sapiens]
Length = 1381
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 47/97 (48%), Gaps = 25/97 (25%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEY-FIVPSQDKNIGTADGVGKDRVTVV 73
P VR+ + TPVG+ IF + A D D G G V Y F PSQ
Sbjct: 136 PYSVRIPENTPVGTPIFI-VNATDPDLGAGGSVLYSFQPPSQ------------------ 176
Query: 74 DGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+F+I+ +G VTV R LD+E TQ Y +T+ A+
Sbjct: 177 ----FFAID-SARGIVTVIRELDYETTQAYQLTVNAT 208
>gi|284925130|ref|NP_001165402.1| cadherin-23 isoform 4 precursor [Homo sapiens]
gi|21619654|gb|AAH32581.1| CDH23 protein [Homo sapiens]
gi|325463513|gb|ADZ15527.1| cadherin-like 23 [synthetic construct]
Length = 1061
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 47/97 (48%), Gaps = 25/97 (25%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEY-FIVPSQDKNIGTADGVGKDRVTVV 73
P VR+ + TPVG+ IF + A D D G G V Y F PSQ
Sbjct: 136 PYSVRIPENTPVGTPIFI-VNATDPDLGAGGSVLYSFQPPSQ------------------ 176
Query: 74 DGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+F+I+ +G VTV R LD+E TQ Y +T+ A+
Sbjct: 177 ----FFAID-SARGIVTVIRELDYETTQAYQLTVNAT 208
>gi|344275031|ref|XP_003409317.1| PREDICTED: protocadherin-15 isoform 11 [Loxodonta africana]
Length = 1915
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 43/95 (45%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I + D D D
Sbjct: 134 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQHNPD------DLTSNDT------ 181
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E RY V I A+
Sbjct: 182 ---FEIPLMLTGNVVLRKRLNYEDKTRYFVIIQAN 213
>gi|344275029|ref|XP_003409316.1| PREDICTED: protocadherin-15 isoform 10 [Loxodonta africana]
Length = 1676
Score = 42.0 bits (97), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 43/95 (45%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I + D D D
Sbjct: 156 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQHNPD------DLTSNDT------ 203
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E RY V I A+
Sbjct: 204 ---FEIPLMLTGNVVLRKRLNYEDKTRYFVIIQAN 235
>gi|344275019|ref|XP_003409311.1| PREDICTED: protocadherin-15 isoform 5 [Loxodonta africana]
Length = 1935
Score = 42.0 bits (97), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 43/95 (45%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I + D D D
Sbjct: 156 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQHNPD------DLTSNDT------ 203
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E RY V I A+
Sbjct: 204 ---FEIPLMLTGNVVLRKRLNYEDKTRYFVIIQAN 235
>gi|341913678|ref|XP_003403671.1| PREDICTED: cadherin-23-like isoform 1 [Homo sapiens]
gi|341913680|ref|XP_003403672.1| PREDICTED: cadherin-23-like isoform 2 [Homo sapiens]
Length = 3354
Score = 42.0 bits (97), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 47/97 (48%), Gaps = 25/97 (25%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEY-FIVPSQDKNIGTADGVGKDRVTVV 73
P VR+ + TPVG+ IF + A D D G G V Y F PSQ
Sbjct: 136 PYSVRIPENTPVGTPIFI-VNATDPDLGAGGSVLYSFQPPSQ------------------ 176
Query: 74 DGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+F+I+ +G VTV R LD+E TQ Y +T+ A+
Sbjct: 177 ----FFAID-SARGIVTVIRELDYETTQAYQLTVNAT 208
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 40/85 (47%), Gaps = 23/85 (27%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
PVG TI + A DAD+G L+EY ++ DG S F+IN P
Sbjct: 2416 PVG-TIILTVTATDADSGNFALIEY---------------------SLGDGESKFAIN-P 2452
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVA 109
G + V SLD EK Y++T +A
Sbjct: 2453 TTGDIYVLSSLDREKKDHYILTALA 2477
>gi|311271576|ref|XP_003133183.1| PREDICTED: protocadherin-15 isoform 8 [Sus scrofa]
Length = 1945
Score = 42.0 bits (97), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 43/95 (45%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I + D D D
Sbjct: 156 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQYNPD------DPTSNDT------ 203
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G + + + L++E RY V I A+
Sbjct: 204 ---FEIPLMLTGNIVLRKRLNYEDKTRYFVIIQAN 235
>gi|15072441|gb|AAK31581.1| protocadherin 15 [Homo sapiens]
Length = 1955
Score = 42.0 bits (97), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 43/95 (45%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I + D D D
Sbjct: 156 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQYNPD------DPTSNDT------ 203
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G + + + L++E RY V I A+
Sbjct: 204 ---FEIPLMLTGNIVLRKRLNYEDKTRYFVIIQAN 235
>gi|344275027|ref|XP_003409315.1| PREDICTED: protocadherin-15 isoform 9 [Loxodonta africana]
Length = 1681
Score = 42.0 bits (97), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 43/95 (45%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I + D D D
Sbjct: 161 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQHNPD------DLTSNDT------ 208
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E RY V I A+
Sbjct: 209 ---FEIPLMLTGNVVLRKRLNYEDKTRYFVIIQAN 240
>gi|194591877|gb|ACF76478.1| protocadherin-15-CD3 isoform 1 [Homo sapiens]
Length = 1675
Score = 42.0 bits (97), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 43/95 (45%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I + D D D
Sbjct: 156 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQYNPD------DPTSNDT------ 203
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G + + + L++E RY V I A+
Sbjct: 204 ---FEIPLMLTGNIVLRKRLNYEDKTRYFVIIQAN 235
>gi|218505798|ref|NP_001136245.1| protocadherin-15 isoform CD1-10 precursor [Homo sapiens]
Length = 1932
Score = 42.0 bits (97), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 43/95 (45%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I + D D D
Sbjct: 134 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQYNPD------DPTSNDT------ 181
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G + + + L++E RY V I A+
Sbjct: 182 ---FEIPLMLTGNIVLRKRLNYEDKTRYFVIIQAN 213
>gi|441600761|ref|XP_004087638.1| PREDICTED: protocadherin-15 isoform 2 [Nomascus leucogenys]
Length = 1782
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 43/95 (45%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I + D D D
Sbjct: 156 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQYNSD------DPTSNDT------ 203
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G + + + L++E RY V I A+
Sbjct: 204 ---FEIPLMLTGNIVLRKRLNYEDKTRYFVIIQAN 235
>gi|311271578|ref|XP_003133185.1| PREDICTED: protocadherin-15 isoform 10 [Sus scrofa]
Length = 1928
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 43/95 (45%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I + D D D
Sbjct: 134 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQYNPD------DPTSNDT------ 181
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G + + + L++E RY V I A+
Sbjct: 182 ---FEIPLMLTGNIVLRKRLNYEDKTRYFVIIQAN 213
>gi|218505781|ref|NP_001136238.1| protocadherin-15 isoform CD1-7 precursor [Homo sapiens]
Length = 1952
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 43/95 (45%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I + D D D
Sbjct: 156 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQYNPD------DPTSNDT------ 203
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G + + + L++E RY V I A+
Sbjct: 204 ---FEIPLMLTGNIVLRKRLNYEDKTRYFVIIQAN 235
>gi|115387123|ref|NP_149045.3| protocadherin-15 isoform CD1-4 precursor [Homo sapiens]
gi|116242702|sp|Q96QU1.2|PCD15_HUMAN RecName: Full=Protocadherin-15; Flags: Precursor
gi|14581464|gb|AAK31804.1| protocadherin 15 [Homo sapiens]
gi|162318576|gb|AAI56451.1| Protocadherin 15 [synthetic construct]
Length = 1955
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 43/95 (45%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I + D D D
Sbjct: 156 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQYNPD------DPTSNDT------ 203
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G + + + L++E RY V I A+
Sbjct: 204 ---FEIPLMLTGNIVLRKRLNYEDKTRYFVIIQAN 235
>gi|281346572|gb|EFB22156.1| hypothetical protein PANDA_018331 [Ailuropoda melanoleuca]
Length = 989
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 44/95 (46%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY + + D D + D
Sbjct: 104 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVVQYNPD------DPMSNDT------ 151
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E RY V I A+
Sbjct: 152 ---FEIPLMLTGNVVLRKRLNYEDKTRYFVIIQAN 183
>gi|218505785|ref|NP_001136240.1| protocadherin-15 isoform CD1-9 precursor [Homo sapiens]
Length = 1935
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 43/95 (45%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I + D D D
Sbjct: 134 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQYNPD------DPTSNDT------ 181
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G + + + L++E RY V I A+
Sbjct: 182 ---FEIPLMLTGNIVLRKRLNYEDKTRYFVIIQAN 213
>gi|218505775|ref|NP_001136235.1| protocadherin-15 isoform CD1-1 precursor [Homo sapiens]
Length = 1962
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 43/95 (45%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I + D D D
Sbjct: 161 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQYNPD------DPTSNDT------ 208
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G + + + L++E RY V I A+
Sbjct: 209 ---FEIPLMLTGNIVLRKRLNYEDKTRYFVIIQAN 240
>gi|311271570|ref|XP_003133180.1| PREDICTED: protocadherin-15 isoform 5 [Sus scrofa]
Length = 1955
Score = 42.0 bits (97), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 43/95 (45%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I + D D D
Sbjct: 161 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQYNPD------DPTSNDT------ 208
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G + + + L++E RY V I A+
Sbjct: 209 ---FEIPLMLTGNIVLRKRLNYEDKTRYFVIIQAN 240
>gi|218505779|ref|NP_001136237.1| protocadherin-15 isoform CD1-6 precursor [Homo sapiens]
Length = 1886
Score = 42.0 bits (97), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 43/95 (45%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I + D D D
Sbjct: 156 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQYNPD------DPTSNDT------ 203
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G + + + L++E RY V I A+
Sbjct: 204 ---FEIPLMLTGNIVLRKRLNYEDKTRYFVIIQAN 235
Score = 34.3 bits (77), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 44/103 (42%), Gaps = 15/103 (14%)
Query: 21 SDLTPVGSTIFKNLRAVDADAGVNGLVEY---------FIVPSQDKNIGTADGV----GK 67
+D+ P S I L AVDAD G NG + Y FI+ I A GV G+
Sbjct: 520 TDMRPGDSVI--QLTAVDADEGSNGEITYEILVGAQGDFIINKTTGLITIAPGVEMIVGR 577
Query: 68 DRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
V G +T+ ++LD E T RY++ I AS
Sbjct: 578 TYALTVQAADNAPPAERSTGILTLGKALDRESTDRYILIITAS 620
>gi|311271582|ref|XP_003133182.1| PREDICTED: protocadherin-15 isoform 7 [Sus scrofa]
Length = 1879
Score = 42.0 bits (97), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 43/95 (45%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I + D D D
Sbjct: 156 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQYNPD------DPTSNDT------ 203
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G + + + L++E RY V I A+
Sbjct: 204 ---FEIPLMLTGNIVLRKRLNYEDKTRYFVIIQAN 235
>gi|119574537|gb|EAW54152.1| protocadherin 15, isoform CRA_b [Homo sapiens]
Length = 1954
Score = 42.0 bits (97), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 43/95 (45%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I + D D D
Sbjct: 156 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQYNPD------DPTSNDT------ 203
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G + + + L++E RY V I A+
Sbjct: 204 ---FEIPLMLTGNIVLRKRLNYEDKTRYFVIIQAN 235
>gi|157108477|ref|XP_001650243.1| cadherin [Aedes aegypti]
gi|108884003|gb|EAT48228.1| AAEL000700-PA [Aedes aegypti]
Length = 3131
Score = 42.0 bits (97), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 11/116 (9%)
Query: 1 LTCTVKVSNRKRTIPVI------VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPS 54
LT V+V + PV ++VS+ TP S I + + AVDAD G N + Y I+
Sbjct: 649 LTILVEVQDVNDNAPVFERSEYAIKVSESTPSNSQIMQ-VTAVDADTGNNARLTYRILGD 707
Query: 55 QDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ T G + + + F I P+ G + + LD E +RY +T++ S
Sbjct: 708 DQR---TRTGKSSSKASEANTPEIFGI-FPNSGWIYLRTKLDREDQERYNITVIVS 759
Score = 37.7 bits (86), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 18/94 (19%)
Query: 17 IVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGY 76
+V V + P+G+ + + +RA+D D GVN + Y I+ +D DG+
Sbjct: 896 VVSVREEQPIGTEVVR-VRAIDRDYGVNASITYSILKGRDS----------------DGH 938
Query: 77 SYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F+I+ P G + SLD E+ Y + + A+
Sbjct: 939 GMFTID-PITGLIRTKASLDHEEKTIYRLAVAAT 971
Score = 35.0 bits (79), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 19/96 (19%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P+ V +S+ VGS +F N A D D+G N ++Y NI K+
Sbjct: 1119 PMNVYISEDAAVGSVVF-NFTATDNDSGTNAEIKY--------NISKPATAQKE------ 1163
Query: 75 GYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+FSI+ G +T+ LD+E+T+ +L+ + A+
Sbjct: 1164 ---FFSID-SLTGSLTLLAPLDYEETKEFLLIVQAT 1195
>gi|444728966|gb|ELW69398.1| Protocadherin-15 [Tupaia chinensis]
Length = 2019
Score = 42.0 bits (97), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 41/95 (43%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I D D
Sbjct: 204 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVI------QYNPEDPTSNDT------ 251
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E RY V I A+
Sbjct: 252 ---FEIPLMLTGNVVLRKRLNYEDKTRYFVIIQAN 283
>gi|344257115|gb|EGW13219.1| Protocadherin Fat 4 [Cricetulus griseus]
Length = 5152
Score = 42.0 bits (97), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 44/93 (47%), Gaps = 22/93 (23%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V +S+ PV S FK ++A D D+G NG + Y I D N G A G+ D
Sbjct: 1174 VTLSESEPVNSRFFK-VQASDKDSGANGEIAYTIT---DGNTGDAFGIFPD--------- 1220
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
GQ+ + LD E +RY++ +VAS
Sbjct: 1221 ---------GQLYIKSELDRELQERYVLLVVAS 1244
>gi|218505793|ref|NP_001136244.1| protocadherin-15 isoform CD3-2 precursor [Homo sapiens]
Length = 1677
Score = 42.0 bits (97), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 43/95 (45%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I + D D D
Sbjct: 156 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQYNPD------DPTSNDT------ 203
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G + + + L++E RY V I A+
Sbjct: 204 ---FEIPLMLTGNIVLRKRLNYEDKTRYFVIIQAN 235
>gi|218505777|ref|NP_001136236.1| protocadherin-15 isoform CD1-2 precursor [Homo sapiens]
Length = 1957
Score = 42.0 bits (97), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 43/95 (45%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I + D D D
Sbjct: 156 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQYNPD------DPTSNDT------ 203
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G + + + L++E RY V I A+
Sbjct: 204 ---FEIPLMLTGNIVLRKRLNYEDKTRYFVIIQAN 235
>gi|80478612|gb|AAI08255.1| CDH23 protein [Homo sapiens]
Length = 445
Score = 42.0 bits (97), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 44/96 (45%), Gaps = 25/96 (26%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEY-FIVPSQDKNIGTADGVGKDRVTVV 73
P VR+ + TPVG+ IF + A D D G G V Y F PSQ I +A G+
Sbjct: 77 PYSVRIPENTPVGTPIFI-VNATDPDLGAGGSVLYSFQPPSQFFAIDSARGI-------- 127
Query: 74 DGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
VTV R LD+E TQ Y +T+ A
Sbjct: 128 ---------------VTVIRELDYETTQAYQLTVNA 148
>gi|218505791|ref|NP_001136243.1| protocadherin-15 isoform CD3-1 precursor [Homo sapiens]
Length = 1682
Score = 41.6 bits (96), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 43/95 (45%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I + D D D
Sbjct: 161 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQYNPD------DPTSNDT------ 208
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G + + + L++E RY V I A+
Sbjct: 209 ---FEIPLMLTGNIVLRKRLNYEDKTRYFVIIQAN 240
>gi|218505789|ref|NP_001136242.1| protocadherin-15 isoform CD2-2 precursor [Homo sapiens]
Length = 1539
Score = 41.6 bits (96), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 43/95 (45%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I + D D D
Sbjct: 156 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQYNPD------DPTSNDT------ 203
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G + + + L++E RY V I A+
Sbjct: 204 ---FEIPLMLTGNIVLRKRLNYEDKTRYFVIIQAN 235
>gi|444725389|gb|ELW65955.1| Cadherin-related family member 1 [Tupaia chinensis]
Length = 916
Score = 41.6 bits (96), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 20/95 (21%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P +V V + TP GS+IFK ++AVD D G G V YF+ ++ + +
Sbjct: 139 PYVVLVPEDTPAGSSIFK-VQAVDQDTGSGGSVAYFL---------------QNPHSTIF 182
Query: 75 GYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
+ S L Q T LD+EK++ +L+T++A
Sbjct: 183 AVDHLSGELHLQEGAT----LDYEKSRTHLITVLA 213
>gi|311271580|ref|XP_003133187.1| PREDICTED: protocadherin-15 isoform 12 [Sus scrofa]
Length = 1925
Score = 41.6 bits (96), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 43/95 (45%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I + D D D
Sbjct: 134 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQYNPD------DPTSNDT------ 181
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G + + + L++E RY V I A+
Sbjct: 182 ---FEIPLMLTGNIVLRKRLNYEDKTRYFVIIQAN 213
>gi|194591875|gb|ACF76477.1| protocadherin-15-CD2 isoform 2 [Homo sapiens]
Length = 1520
Score = 41.6 bits (96), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 43/95 (45%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I + D D D
Sbjct: 156 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQYNPD------DPTSNDT------ 203
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G + + + L++E RY V I A+
Sbjct: 204 ---FEIPLMLTGNIVLRKRLNYEDKTRYFVIIQAN 235
>gi|218505787|ref|NP_001136241.1| protocadherin-15 isoform CD2-1 precursor [Homo sapiens]
Length = 1790
Score = 41.6 bits (96), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 43/95 (45%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I + D D D
Sbjct: 161 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQYNPD------DPTSNDT------ 208
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G + + + L++E RY V I A+
Sbjct: 209 ---FEIPLMLTGNIVLRKRLNYEDKTRYFVIIQAN 240
>gi|354495052|ref|XP_003509646.1| PREDICTED: protocadherin Fat 4 [Cricetulus griseus]
Length = 4981
Score = 41.6 bits (96), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 44/93 (47%), Gaps = 22/93 (23%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V +S+ PV S FK ++A D D+G NG + Y I D N G A G+ D
Sbjct: 1003 VTLSESEPVNSRFFK-VQASDKDSGANGEIAYTIT---DGNTGDAFGIFPD--------- 1049
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
GQ+ + LD E +RY++ +VAS
Sbjct: 1050 ---------GQLYIKSELDRELQERYVLLVVAS 1073
Score = 34.3 bits (77), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 40/90 (44%), Gaps = 22/90 (24%)
Query: 20 VSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYF 79
V + P G+T+ +L A DAD+G N ++ Y V S D ++ D
Sbjct: 3205 VMENAPSGTTVI-HLNATDADSGTNAVIAY-TVQSSDSDLFVID---------------- 3246
Query: 80 SINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
P+ G +T LDFE Q Y +T+ A
Sbjct: 3247 ----PNTGVITTQGFLDFETKQSYHLTVKA 3272
>gi|311271564|ref|XP_003133178.1| PREDICTED: protocadherin-15 isoform 3 [Sus scrofa]
Length = 1676
Score = 41.6 bits (96), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 43/95 (45%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I + D D D
Sbjct: 156 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQYNPD------DPTSNDT------ 203
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G + + + L++E RY V I A+
Sbjct: 204 ---FEIPLMLTGNIVLRKRLNYEDKTRYFVIIQAN 235
>gi|57997201|emb|CAD38850.2| hypothetical protein [Homo sapiens]
Length = 956
Score = 41.6 bits (96), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 43/95 (45%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I + D D D
Sbjct: 156 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQYNPD------DPTSNDT------ 203
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G + + + L++E RY V I A+
Sbjct: 204 ---FEIPLMLTGNIVLRKRLNYEDKTRYFVIIQAN 235
>gi|344275025|ref|XP_003409314.1| PREDICTED: protocadherin-15 isoform 8 [Loxodonta africana]
Length = 1789
Score = 41.6 bits (96), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 43/95 (45%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I + D D D
Sbjct: 161 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQHNPD------DLTSNDT------ 208
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E RY V I A+
Sbjct: 209 ---FEIPLMLTGNVVLRKRLNYEDKTRYFVIIQAN 240
>gi|335301963|ref|XP_003359335.1| PREDICTED: protocadherin-15 [Sus scrofa]
Length = 1538
Score = 41.6 bits (96), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 43/95 (45%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I + D D D
Sbjct: 156 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQYNPD------DPTSNDT------ 203
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G + + + L++E RY V I A+
Sbjct: 204 ---FEIPLMLTGNIVLRKRLNYEDKTRYFVIIQAN 235
>gi|311271562|ref|XP_003133177.1| PREDICTED: protocadherin-15 isoform 2 [Sus scrofa]
Length = 1681
Score = 41.6 bits (96), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 43/95 (45%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I + D D D
Sbjct: 161 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQYNPD------DPTSNDT------ 208
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G + + + L++E RY V I A+
Sbjct: 209 ---FEIPLMLTGNIVLRKRLNYEDKTRYFVIIQAN 240
>gi|85725313|gb|ABC79274.1| protocadherin-15-CD2 isoform 7 [Mus musculus]
Length = 719
Score = 41.6 bits (96), Expect = 0.056, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 41/95 (43%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I D D
Sbjct: 156 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVI------QYNPEDPTSNDT------ 203
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E RY V I A+
Sbjct: 204 ---FEIPLMLTGNVVLRKRLNYEDKTRYYVIIQAN 235
>gi|157409|gb|AAA28530.1| fat protein [Drosophila melanogaster]
Length = 5147
Score = 41.6 bits (96), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 59/117 (50%), Gaps = 21/117 (17%)
Query: 1 LTCTVKVS----NRKRTIPVIVRVSDLTPVGS----TIFKNLRAVDADAGVNGLVEYFIV 52
L+ TVKV+ + +PV V ++ + + T+ ++AVD D G NG ++Y +
Sbjct: 2147 LSSTVKVTILIKDVNDEVPVFVSANETAIMENVAINTVVIAVKAVDNDEGRNGYIDYLMK 2206
Query: 53 PSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
++D+++G +D + FS+N P GQ+ V +LD E YL+ I A
Sbjct: 2207 EARDEDMGQSDPLP------------FSLN-PTDGQLRVVDALDRELRSSYLLNITA 2250
>gi|326673345|ref|XP_003199850.1| PREDICTED: protocadherin-10-like [Danio rerio]
Length = 791
Score = 41.6 bits (96), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 19/93 (20%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V + + P+G+ + K L A D D G NG + Y V KNI + Y
Sbjct: 251 VSLRENAPLGTLVIK-LNATDLDEGQNGEIVYSFV----KNI--------------EKYI 291
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
Y + +L + G++ V SLDFEK+ Y + ++AS
Sbjct: 292 YDTFDLDNTGEIRVKGSLDFEKSNVYRIAVMAS 324
>gi|335301958|ref|XP_003359333.1| PREDICTED: protocadherin-15 [Sus scrofa]
Length = 1674
Score = 41.6 bits (96), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 43/95 (45%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I + D D D
Sbjct: 156 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQYNPD------DPTSNDT------ 203
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G + + + L++E RY V I A+
Sbjct: 204 ---FEIPLMLTGNIVLRKRLNYEDKTRYFVIIQAN 235
>gi|332030997|gb|EGI70623.1| Protein dachsous [Acromyrmex echinatior]
Length = 680
Score = 41.6 bits (96), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 40/84 (47%), Gaps = 19/84 (22%)
Query: 26 VGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPH 85
VG+ + + A DADAG NG +EY I Q D F I+ P
Sbjct: 308 VGTPVLA-VNATDADAGDNGRIEYSINRRQS-----------------DREEMFRID-PE 348
Query: 86 QGQVTVNRSLDFEKTQRYLVTIVA 109
G V VN++LDFE +R+ + IVA
Sbjct: 349 TGMVYVNKALDFESKERHELVIVA 372
>gi|119574536|gb|EAW54151.1| protocadherin 15, isoform CRA_a [Homo sapiens]
Length = 1401
Score = 41.6 bits (96), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 43/95 (45%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I + D D D
Sbjct: 156 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQYNPD------DPTSNDT------ 203
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G + + + L++E RY V I A+
Sbjct: 204 ---FEIPLMLTGNIVLRKRLNYEDKTRYFVIIQAN 235
>gi|397501091|ref|XP_003821231.1| PREDICTED: protocadherin-15-like, partial [Pan paniscus]
Length = 1136
Score = 41.6 bits (96), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 43/95 (45%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I + D D D
Sbjct: 161 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQYNPD------DPTSNDT------ 208
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G + + + L++E RY V I A+
Sbjct: 209 ---FEIPLMLTGNIVLRKRLNYEDKTRYFVIIQAN 240
>gi|410974945|ref|XP_003993899.1| PREDICTED: protocadherin-15 isoform 3 [Felis catus]
Length = 1923
Score = 41.6 bits (96), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 41/95 (43%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I D D
Sbjct: 161 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVI------QYNPEDPTSNDT------ 208
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E RY V I A+
Sbjct: 209 ---FEIPLMLTGNVVLRKRLNYEDKTRYFVIIQAN 240
>gi|355709594|gb|AES03643.1| protocadherin gamma subfamily B, 6 [Mustela putorius furo]
Length = 146
Score = 41.6 bits (96), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 43/92 (46%), Gaps = 19/92 (20%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V VS+ P GS++ + + A D D GVN V Y+ R T +
Sbjct: 52 VSVSENLPTGSSVLQ-VTATDKDEGVNSEVNYYF-----------------RSTAQNTRH 93
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
FS++ G + N+SLDFE T+RY + + A
Sbjct: 94 MFSLD-EKTGMIKNNQSLDFEDTERYSMEVEA 124
>gi|335301961|ref|XP_003359334.1| PREDICTED: protocadherin-15 [Sus scrofa]
Length = 1785
Score = 41.6 bits (96), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 43/95 (45%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I + D D D
Sbjct: 156 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQYNPD------DPTSNDT------ 203
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G + + + L++E RY V I A+
Sbjct: 204 ---FEIPLMLTGNIVLRKRLNYEDKTRYFVIIQAN 235
>gi|85725341|gb|ABC79287.1| protocadherin-15-CD3 isoform 4 [Gallus gallus]
Length = 384
Score = 41.6 bits (96), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 46/97 (47%), Gaps = 19/97 (19%)
Query: 18 VRVSDLTPVGSTIFK----NLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVV 73
V V++LTPVG+TIF N A D D G NG +EY I + N T++
Sbjct: 154 VAVNELTPVGTTIFTGFSGNNGATDIDDGPNGQIEYVI--QYNPNDKTSNRT-------- 203
Query: 74 DGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + L++E+ RY V + A+
Sbjct: 204 -----FDIPLTLSGAVVLRERLNYEEKTRYFVIVQAN 235
>gi|85725335|gb|ABC79285.1| protocadherin-15-CD3 isoform 2 [Gallus gallus]
Length = 618
Score = 41.6 bits (96), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 46/97 (47%), Gaps = 19/97 (19%)
Query: 18 VRVSDLTPVGSTIFK----NLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVV 73
V V++LTPVG+TIF N A D D G NG +EY I + N T++
Sbjct: 154 VAVNELTPVGTTIFTGFSGNNGATDIDDGPNGQIEYVI--QYNPNDKTSNRT-------- 203
Query: 74 DGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + L++E+ RY V + A+
Sbjct: 204 -----FDIPLTLSGAVVLRERLNYEEKTRYFVIVQAN 235
>gi|170032327|ref|XP_001844033.1| protocadherin gamma B4 [Culex quinquefasciatus]
gi|167872319|gb|EDS35702.1| protocadherin gamma B4 [Culex quinquefasciatus]
Length = 2020
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 21/95 (22%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P V++S+ + +G+ + + + DAD G+NG V Y+I ADG G +R + D
Sbjct: 1459 PYKVQISEGSSIGTQLIR-VYTNDADEGLNGDVFYYI----------ADGNGDERFVIDD 1507
Query: 75 GYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
GQ+T+ ++LD E Y +TIVA
Sbjct: 1508 A----------TGQITLAKALDRETVSMYKLTIVA 1532
Score = 38.5 bits (88), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 21/93 (22%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
+ +++ TP+G+ + + RA D D GVN + + I G R T
Sbjct: 1568 ISINETTPIGTELIR-FRATDMDLGVNSQITFSI------------AAGNRRDT------ 1608
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I+ P G + ++R LD+E TQ Y + I AS
Sbjct: 1609 -FHID-PTSGYLYLHRLLDYEDTQSYSLNITAS 1639
>gi|85725337|gb|ABC79286.1| protocadherin-15-CD3 isoform 3 [Gallus gallus]
Length = 302
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 46/97 (47%), Gaps = 19/97 (19%)
Query: 18 VRVSDLTPVGSTIFK----NLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVV 73
V V++LTPVG+TIF N A D D G NG +EY I + N T++
Sbjct: 154 VAVNELTPVGTTIFTGFSGNNGATDIDDGPNGQIEYVI--QYNPNDKTSNRT-------- 203
Query: 74 DGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + L++E+ RY V + A+
Sbjct: 204 -----FDIPLTLSGAVVLRERLNYEEKTRYFVIVQAN 235
>gi|300794761|ref|NP_001178634.1| protocadherin Fat 4 [Rattus norvegicus]
Length = 4979
Score = 41.6 bits (96), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 44/93 (47%), Gaps = 22/93 (23%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V +S+ PV S FK ++A+D D+G NG + Y I D N G A G+ D
Sbjct: 1003 VTLSESEPVNSRFFK-VQALDKDSGANGEIAYAIT---DGNSGEAFGIFPD--------- 1049
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
GQ+ + LD E RY++ +VAS
Sbjct: 1050 ---------GQLYIKSELDRELQDRYVLLVVAS 1073
Score = 35.0 bits (79), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 47/98 (47%), Gaps = 26/98 (26%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIV-PSQDK-NIGTADGVGKDRVTV 72
P + + + TP+ + +FK +A D D+G N +EY ++ P+ +K +IGT D
Sbjct: 2054 PKLTYIPENTPIDTVVFK-AQATDPDSGPNSYIEYTLLNPAGNKFSIGTID--------- 2103
Query: 73 VDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
G+V + LD E+ Y +T+VA+
Sbjct: 2104 --------------GEVHLTGELDREEVSNYSLTVVAT 2127
Score = 34.3 bits (77), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 40/90 (44%), Gaps = 22/90 (24%)
Query: 20 VSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYF 79
V + P G+T+ +L A DAD+G N ++ Y V S D ++ D
Sbjct: 3203 VMENAPSGTTVI-HLNATDADSGANAVIAY-TVQSSDSDLFVID---------------- 3244
Query: 80 SINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
P+ G +T LDFE Q Y +T+ A
Sbjct: 3245 ----PNTGVITTQGFLDFETKQSYHLTVKA 3270
>gi|194591873|gb|ACF76476.1| protocadherin-15-CD2 isoform 1 [Homo sapiens]
Length = 1783
Score = 41.6 bits (96), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 43/95 (45%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I + D D D
Sbjct: 156 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQYNPD------DPTSNDT------ 203
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G + + + L++E RY V I A+
Sbjct: 204 ---FEIPLMLTGNIVLRKRLNYEDKTRYFVIIQAN 235
>gi|85725311|gb|ABC79273.1| protocadherin-15-CD2 isoform 6 [Mus musculus]
Length = 650
Score = 41.6 bits (96), Expect = 0.060, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 41/95 (43%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I D D
Sbjct: 156 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVI------QYNPEDPTSNDT------ 203
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E RY V I A+
Sbjct: 204 ---FEIPLMLTGNVVLRKRLNYEDKTRYYVIIQAN 235
>gi|410974949|ref|XP_003993901.1| PREDICTED: protocadherin-15 isoform 5 [Felis catus]
Length = 1672
Score = 41.6 bits (96), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 41/95 (43%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I D D
Sbjct: 156 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVI------QYNPEDPTSNDT------ 203
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E RY V I A+
Sbjct: 204 ---FEIPLMLTGNVVLRKRLNYEDKTRYFVIIQAN 235
>gi|410974941|ref|XP_003993897.1| PREDICTED: protocadherin-15 isoform 1 [Felis catus]
Length = 1679
Score = 41.6 bits (96), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 41/95 (43%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I D D
Sbjct: 161 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVI------QYNPEDPTSNDT------ 208
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E RY V I A+
Sbjct: 209 ---FEIPLMLTGNVVLRKRLNYEDKTRYFVIIQAN 240
>gi|344238297|gb|EGV94400.1| Protocadherin beta-6 [Cricetulus griseus]
Length = 2168
Score = 41.6 bits (96), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 43/92 (46%), Gaps = 19/92 (20%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V++ + +P+GS I + A D D GVNG + Y + + D D
Sbjct: 1350 VQIPEDSPIGSLI-TTVSATDKDIGVNGQISYSLFQASD-----------------DISK 1391
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
FS + P G+V + LDFEKTQ Y V I A
Sbjct: 1392 TFSTH-PLTGEVRLKEQLDFEKTQSYEVNIEA 1422
>gi|193785246|dbj|BAG54399.1| unnamed protein product [Homo sapiens]
Length = 725
Score = 41.6 bits (96), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 43/95 (45%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I + D D D
Sbjct: 134 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQYNPD------DPTSNDT------ 181
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G + + + L++E RY V I A+
Sbjct: 182 ---FEIPLMLTGNIVLRKRLNYEDKTRYFVIIQAN 213
>gi|392338710|ref|XP_001070073.3| PREDICTED: protocadherin Fat 4 [Rattus norvegicus]
Length = 4981
Score = 41.6 bits (96), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 44/93 (47%), Gaps = 22/93 (23%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V +S+ PV S FK ++A+D D+G NG + Y I D N G A G+ D
Sbjct: 1003 VTLSESEPVNSRFFK-VQALDKDSGANGEIAYAIT---DGNSGEAFGIFPD--------- 1049
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
GQ+ + LD E RY++ +VAS
Sbjct: 1050 ---------GQLYIKSELDRELQDRYVLLVVAS 1073
Score = 35.0 bits (79), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 47/98 (47%), Gaps = 26/98 (26%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIV-PSQDK-NIGTADGVGKDRVTV 72
P + + + TP+ + +FK +A D D+G N +EY ++ P+ +K +IGT D
Sbjct: 2054 PKLTYIPENTPIDTVVFK-AQATDPDSGPNSYIEYTLLNPAGNKFSIGTID--------- 2103
Query: 73 VDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
G+V + LD E+ Y +T+VA+
Sbjct: 2104 --------------GEVHLTGELDREEVSNYSLTVVAT 2127
Score = 34.3 bits (77), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 40/90 (44%), Gaps = 22/90 (24%)
Query: 20 VSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYF 79
V + P G+T+ +L A DAD+G N ++ Y V S D ++ D
Sbjct: 3205 VMENAPSGTTVI-HLNATDADSGANAVIAY-TVQSSDSDLFVID---------------- 3246
Query: 80 SINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
P+ G +T LDFE Q Y +T+ A
Sbjct: 3247 ----PNTGVITTQGFLDFETKQSYHLTVKA 3272
>gi|410974951|ref|XP_003993902.1| PREDICTED: protocadherin-15 isoform 6 [Felis catus]
Length = 1681
Score = 41.6 bits (96), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 41/95 (43%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I D D
Sbjct: 156 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVI------QYNPEDPTSNDT------ 203
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E RY V I A+
Sbjct: 204 ---FEIPLMLTGNVVLRKRLNYEDKTRYFVIIQAN 235
>gi|410974947|ref|XP_003993900.1| PREDICTED: protocadherin-15 isoform 4 [Felis catus]
Length = 1674
Score = 41.6 bits (96), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 41/95 (43%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I D D
Sbjct: 156 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVI------QYNPEDPTSNDT------ 203
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E RY V I A+
Sbjct: 204 ---FEIPLMLTGNVVLRKRLNYEDKTRYFVIIQAN 235
>gi|241148648|ref|XP_002405854.1| protocadherin-16, putative [Ixodes scapularis]
gi|215493769|gb|EEC03410.1| protocadherin-16, putative [Ixodes scapularis]
Length = 3222
Score = 41.6 bits (96), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 23/91 (25%)
Query: 20 VSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYF 79
V++ P G+T+ + L A DAD+G N +V+Y +V G S F
Sbjct: 1502 VAENEPPGTTVTQ-LSASDADSGRNRIVQY---------------------ALVGGSSDF 1539
Query: 80 SINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+++ P G VT S D+E+T Y++ +VAS
Sbjct: 1540 AVD-PQSGVVTAQSSFDYEQTSEYVLEVVAS 1569
Score = 38.5 bits (88), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 27/93 (29%)
Query: 20 VSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIV---PSQDKNIGTADGVGKDRVTVVDGY 76
VS+ + VG+++ + + A D D G +G V Y I+ P+ D ++G GV
Sbjct: 439 VSENSSVGASVLR-VSATDQDEGASGQVRYSIIAGDPNHDFSVGQDTGV----------- 486
Query: 77 SYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
+ V RSLD+E+ RYL+T+ A
Sbjct: 487 ------------LRVRRSLDYERRTRYLLTLQA 507
>gi|410974955|ref|XP_003993904.1| PREDICTED: protocadherin-15 isoform 8 [Felis catus]
Length = 1788
Score = 41.6 bits (96), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 41/95 (43%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I D D
Sbjct: 156 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVI------QYNPEDPTSNDT------ 203
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E RY V I A+
Sbjct: 204 ---FEIPLMLTGNVVLRKRLNYEDKTRYFVIIQAN 235
>gi|410974953|ref|XP_003993903.1| PREDICTED: protocadherin-15 isoform 7 [Felis catus]
Length = 1786
Score = 41.6 bits (96), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 41/95 (43%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I D D
Sbjct: 156 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVI------QYNPEDPTSNDT------ 203
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E RY V I A+
Sbjct: 204 ---FEIPLMLTGNVVLRKRLNYEDKTRYFVIIQAN 235
>gi|410974959|ref|XP_003993906.1| PREDICTED: protocadherin-15 isoform 10 [Felis catus]
Length = 1528
Score = 41.6 bits (96), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 41/95 (43%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I D D
Sbjct: 156 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVI------QYNPEDPTSNDT------ 203
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E RY V I A+
Sbjct: 204 ---FEIPLMLTGNVVLRKRLNYEDKTRYFVIIQAN 235
>gi|213625109|gb|AAI69845.1| Cadherin 6, type 2, K-cadherin [Xenopus laevis]
Length = 792
Score = 41.6 bits (96), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 17/92 (18%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
+R + +PVGS+I K ++A D D G N EY I + N+ + DR T
Sbjct: 277 LRALESSPVGSSIGK-IKANDTDEGENAETEYHISEGDESNMF---DIITDRDT------ 326
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
+G +TV + LDFEK + Y +T+ A
Sbjct: 327 -------QEGVITVKKPLDFEKKKLYTLTVEA 351
>gi|311271566|ref|XP_003133179.1| PREDICTED: protocadherin-15 isoform 4 [Sus scrofa]
Length = 1792
Score = 41.6 bits (96), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 43/95 (45%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I + D D D
Sbjct: 161 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQYNPD------DPTSNDT------ 208
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G + + + L++E RY V I A+
Sbjct: 209 ---FEIPLMLTGNIVLRKRLNYEDKTRYFVIIQAN 240
>gi|11119968|gb|AAG30809.1|AF263272_1 cadherin-6 [Xenopus laevis]
gi|213626669|gb|AAI69843.1| Cadherin 6, type 2, K-cadherin [Xenopus laevis]
Length = 792
Score = 41.6 bits (96), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 17/92 (18%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
+R + +PVGS+I K ++A D D G N EY I + N+ + DR T
Sbjct: 277 LRALESSPVGSSIGK-IKANDTDEGENAETEYHISEGDESNMF---DIITDRDT------ 326
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
+G +TV + LDFEK + Y +T+ A
Sbjct: 327 -------QEGVITVKKPLDFEKKKLYTLTVEA 351
>gi|410974957|ref|XP_003993905.1| PREDICTED: protocadherin-15 isoform 9 [Felis catus]
Length = 1538
Score = 41.6 bits (96), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 41/95 (43%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I D D
Sbjct: 156 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVI------QYNPEDPTSNDT------ 203
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E RY V I A+
Sbjct: 204 ---FEIPLMLTGNVVLRKRLNYEDKTRYFVIIQAN 235
>gi|410915852|ref|XP_003971401.1| PREDICTED: protocadherin Fat 3-like [Takifugu rubripes]
Length = 4766
Score = 41.6 bits (96), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 49/102 (48%), Gaps = 21/102 (20%)
Query: 6 KVSNRKRTIPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGV 65
K + + +P + V + PVG ++F+ +RA D DAG NG V + I D N G +
Sbjct: 715 KQAPQFEALPTSILVREDLPVGGSVFE-VRARDGDAGFNGRVLFSI---SDGNKGNS--- 767
Query: 66 GKDRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTI 107
F+IN+ G +TV + LD E+ RY + I
Sbjct: 768 -------------FNINM-ENGLITVFQQLDRERLDRYFLNI 795
>gi|410974943|ref|XP_003993898.1| PREDICTED: protocadherin-15 isoform 2 [Felis catus]
Length = 1793
Score = 41.6 bits (96), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 41/95 (43%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I D D
Sbjct: 161 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVI------QYNPEDPTSNDT------ 208
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E RY V I A+
Sbjct: 209 ---FEIPLMLTGNVVLRKRLNYEDKTRYFVIIQAN 240
>gi|297301192|ref|XP_002805748.1| PREDICTED: cadherin-23-like [Macaca mulatta]
Length = 3485
Score = 41.6 bits (96), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 47/97 (48%), Gaps = 25/97 (25%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEY-FIVPSQDKNIGTADGVGKDRVTVV 73
P VR+ + TPVG+ IF + A D D G G V Y F PSQ
Sbjct: 288 PYSVRIPENTPVGTPIFI-VNATDPDLGAGGSVLYSFQPPSQ------------------ 328
Query: 74 DGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+F+I+ +G +TV R LD+E TQ Y +T+ A+
Sbjct: 329 ----FFAID-SARGIITVIRELDYETTQAYQLTVNAT 360
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 40/85 (47%), Gaps = 23/85 (27%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
PVG+ I + A DAD+G L+EY + DG GK F+IN P
Sbjct: 2547 PVGTVIL-TVTATDADSGNFALIEYSL----------GDGEGK-----------FAIN-P 2583
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVA 109
G + V SLD EK Y++T +A
Sbjct: 2584 TTGDIYVLSSLDREKKDHYILTALA 2608
>gi|426364795|ref|XP_004049480.1| PREDICTED: protocadherin-15-like, partial [Gorilla gorilla gorilla]
Length = 585
Score = 41.6 bits (96), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 41/93 (44%), Gaps = 19/93 (20%)
Query: 22 DLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
DLTPVG+TIF A D D G NG +EY I + D D D
Sbjct: 85 DLTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQYNPD------DPTSNDT-------- 130
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G + + + L++E RY V I A+
Sbjct: 131 -FEIPLMLTGNIVLRKRLNYEDKTRYFVIIQAN 162
>gi|85725329|gb|ABC79282.1| protocadherin-15-CD1 isoform 1 [Gallus gallus]
Length = 1899
Score = 41.6 bits (96), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 46/97 (47%), Gaps = 19/97 (19%)
Query: 18 VRVSDLTPVGSTIFK----NLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVV 73
V V++LTPVG+TIF N A D D G NG +EY I + N T++
Sbjct: 154 VAVNELTPVGTTIFTGFSGNNGATDIDDGPNGQIEYVI--QYNPNDKTSNRT-------- 203
Query: 74 DGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + L++E+ RY V + A+
Sbjct: 204 -----FDIPLTLSGAVVLRERLNYEEKTRYFVIVQAN 235
>gi|85725333|gb|ABC79284.1| protocadherin-15-CD3 isoform 1 [Gallus gallus]
Length = 1710
Score = 41.6 bits (96), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 46/97 (47%), Gaps = 19/97 (19%)
Query: 18 VRVSDLTPVGSTIFK----NLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVV 73
V V++LTPVG+TIF N A D D G NG +EY I + N T++
Sbjct: 154 VAVNELTPVGTTIFTGFSGNNGATDIDDGPNGQIEYVI--QYNPNDKTSNRT-------- 203
Query: 74 DGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + L++E+ RY V + A+
Sbjct: 204 -----FDIPLTLSGAVVLRERLNYEEKTRYFVIVQAN 235
>gi|291404355|ref|XP_002718532.1| PREDICTED: protocadherin 15 isoform 2 [Oryctolagus cuniculus]
Length = 1899
Score = 41.6 bits (96), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 43/95 (45%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I + D D D
Sbjct: 134 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQYNPD------DPTSNDT------ 181
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E RY V + A+
Sbjct: 182 ---FEIPLMLTGNVVLRKRLNYEDKTRYFVIVQAN 213
>gi|291404353|ref|XP_002718531.1| PREDICTED: protocadherin 15 isoform 1 [Oryctolagus cuniculus]
Length = 1902
Score = 41.2 bits (95), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 43/95 (45%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I + D D D
Sbjct: 134 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQYNPD------DPTSNDT------ 181
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E RY V + A+
Sbjct: 182 ---FEIPLMLTGNVVLRKRLNYEDKTRYFVIVQAN 213
>gi|380011903|ref|XP_003690033.1| PREDICTED: LOW QUALITY PROTEIN: protein dachsous-like, partial
[Apis florea]
Length = 2820
Score = 41.2 bits (95), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 20/96 (20%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P+ VRVS+ +GSTI+ NL A+D D+G+NG + Y +V + D D +T
Sbjct: 878 PITVRVSERAAIGSTIY-NLTAIDLDSGLNGDLRYGLV----AEFPSRDSFAVDSLT--- 929
Query: 75 GYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
G +T+ + LD E+ Y + + AS
Sbjct: 930 ------------GALTLAKPLDREERAEYTLILRAS 953
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 37/77 (48%), Gaps = 19/77 (24%)
Query: 34 LRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNR 93
L A DAD G+NG V Y IV D N A F+I+ P+ G V N
Sbjct: 1705 LSASDADQGMNGRVLYHIV---DGNPDNA----------------FTISPPYSGIVRTNI 1745
Query: 94 SLDFEKTQRYLVTIVAS 110
LD E ++Y +TI+A+
Sbjct: 1746 VLDREIREKYRLTIIAT 1762
Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 43/91 (47%), Gaps = 12/91 (13%)
Query: 20 VSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYF 79
V + P+G+T+F + RA D D G+ G + Y IV + G +D R+ VDG S
Sbjct: 2209 VGENEPIGTTVF-SARASDLDRGIFGSLNYSIVSA--AATGFSDIDDSWRLFAVDGKS-- 2263
Query: 80 SINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
G VT D+E RY T+ A+
Sbjct: 2264 -------GTVTTRAVFDYELRNRYAFTLRAT 2287
Score = 34.3 bits (77), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 18/94 (19%)
Query: 17 IVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGY 76
+V V + P G+ + + +RA+D D G N V Y I+ +D DGY
Sbjct: 666 VVSVREEQPPGTEVAR-VRALDTDLGENASVTYTILKDRDS----------------DGY 708
Query: 77 SYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ F+++ P G + LD E+ Y V++ A+
Sbjct: 709 NVFTVD-PITGMIRTKAVLDHEERNVYRVSVKAT 741
>gi|17352473|ref|NP_477497.1| fat [Drosophila melanogaster]
gi|13124727|sp|P33450.3|FAT_DROME RecName: Full=Cadherin-related tumor suppressor; AltName:
Full=Protein fat; Flags: Precursor
gi|7295732|gb|AAF51036.1| fat [Drosophila melanogaster]
Length = 5147
Score = 41.2 bits (95), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 13/82 (15%)
Query: 28 STIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQG 87
+T+ ++AVD D G NG ++Y + ++D+++G +D + FS+N P G
Sbjct: 2182 NTVVIAVKAVDNDEGRNGYIDYLMKEARDEDMGQSDPLP------------FSLN-PTDG 2228
Query: 88 QVTVNRSLDFEKTQRYLVTIVA 109
Q+ V +LD E YL+ I A
Sbjct: 2229 QLRVVDALDRELRSSYLLNITA 2250
>gi|297676223|ref|XP_002816042.1| PREDICTED: protocadherin beta-8 [Pongo abelii]
Length = 801
Score = 41.2 bits (95), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 19/92 (20%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V++S+ +PVG + K + A DAD GVNG + Y + + D+ +GK
Sbjct: 250 VQISEDSPVGFLVVK-VSATDADTGVNGEISYSLFQASDE-------IGKT--------- 292
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
F ++ G++ + + LDFEK Q Y V I A
Sbjct: 293 -FKVDF-LTGEIRLRKQLDFEKFQSYEVNIEA 322
>gi|326923240|ref|XP_003207847.1| PREDICTED: protocadherin-15-like [Meleagris gallopavo]
Length = 2258
Score = 41.2 bits (95), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 46/97 (47%), Gaps = 19/97 (19%)
Query: 18 VRVSDLTPVGSTIFK----NLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVV 73
V V++LTPVG+TIF N A D D G NG +EY I + N T++
Sbjct: 220 VAVNELTPVGTTIFTGFSGNNGATDIDDGPNGQIEYVI--QYNPNDKTSNRT-------- 269
Query: 74 DGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + L++E+ RY V + A+
Sbjct: 270 -----FDIPLTLSGAVVLRERLNYEEKTRYFVIVQAN 301
>gi|392355304|ref|XP_003751999.1| PREDICTED: protocadherin-15-like [Rattus norvegicus]
Length = 389
Score = 41.2 bits (95), Expect = 0.073, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 41/95 (43%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I D D
Sbjct: 161 VNELTPVGTTIFTGFAGDNGATDIDDGPNGQIEYVI------QYNPEDPTSNDT------ 208
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E RY V I A+
Sbjct: 209 ---FEIPLMLTGNVVLRKRLNYEDKTRYYVIIQAN 240
>gi|149048782|gb|EDM01323.1| similar to FAT tumor suppressor homolog 4 (predicted) [Rattus
norvegicus]
Length = 1155
Score = 41.2 bits (95), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 44/93 (47%), Gaps = 22/93 (23%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V +S+ PV S FK ++A+D D+G NG + Y I D N G A G+ D
Sbjct: 1003 VTLSESEPVNSRFFK-VQALDKDSGANGEIAYAIT---DGNSGEAFGIFPD--------- 1049
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
GQ+ + LD E RY++ +VAS
Sbjct: 1050 ---------GQLYIKSELDRELQDRYVLLVVAS 1073
>gi|363733446|ref|XP_420617.3| PREDICTED: protocadherin Fat 4 [Gallus gallus]
Length = 5019
Score = 41.2 bits (95), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 28/113 (24%)
Query: 4 TVKVSNRKRTIPVIVRVS------DLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDK 57
TV V + PV ++S + PV S FK + A D D+GVNG + Y I+ +
Sbjct: 1017 TVSVHDVNDNPPVFDQLSYEITILESEPVNSRFFK-VHATDKDSGVNGEIAYSII---EG 1072
Query: 58 NIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
N G A G+ D GQ+ + LD E +RY++ +VAS
Sbjct: 1073 NAGDAFGIFPD------------------GQLYIKSELDRELQERYILLVVAS 1107
>gi|347543893|gb|AEP02519.1| PCDH15, partial [Myotis altarium]
Length = 1916
Score = 41.2 bits (95), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 43/95 (45%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I + D D D
Sbjct: 149 VNELTPVGTTIFTGFAGDNGATDIDDGPNGQIEYVIQYNPD------DPTSNDT------ 196
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E RY V I A+
Sbjct: 197 ---FEIPLMLTGNVVLRKRLNYEDKTRYYVIIQAN 228
>gi|328790020|ref|XP_392300.4| PREDICTED: protein dachsous-like [Apis mellifera]
Length = 3415
Score = 41.2 bits (95), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 46/96 (47%), Gaps = 20/96 (20%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P+ VRVS+ +GSTI+ NL AVD D+G+NG + Y +V D D +T
Sbjct: 1460 PITVRVSERAAIGSTIY-NLTAVDLDSGLNGDLRYGLV----AEFPPRDSFAVDSLT--- 1511
Query: 75 GYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
G +T+ + LD E+ Y + + AS
Sbjct: 1512 ------------GALTLAKPLDREERAEYTLILKAS 1535
Score = 40.8 bits (94), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 40/84 (47%), Gaps = 19/84 (22%)
Query: 26 VGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPH 85
VG+ + + A D+DAG NG +EY I Q D F I+ P
Sbjct: 237 VGTPVLA-VNATDSDAGENGRIEYSINRRQS-----------------DREEMFRID-PE 277
Query: 86 QGQVTVNRSLDFEKTQRYLVTIVA 109
G V VN++LDFE +R+ + IVA
Sbjct: 278 TGMVYVNKALDFESKERHELVIVA 301
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 19/77 (24%)
Query: 34 LRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNR 93
L A DAD G+NG + Y IV D N A F+I+ P+ G V N
Sbjct: 2289 LSASDADQGMNGRILYHIV---DGNPDNA----------------FTISPPYSGIVRTNI 2329
Query: 94 SLDFEKTQRYLVTIVAS 110
LD E ++Y +TI+A+
Sbjct: 2330 VLDREIREKYRLTIIAT 2346
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 43/91 (47%), Gaps = 12/91 (13%)
Query: 20 VSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYF 79
V + PVG+T+F + RA D D G+ G + Y IV + G +D R+ VDG S
Sbjct: 2794 VGENEPVGTTVF-SARASDLDRGIFGALNYSIVSA--AATGFSDIDDSWRLFAVDGKS-- 2848
Query: 80 SINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
G VT D+E RY T+ A+
Sbjct: 2849 -------GTVTTRAVFDYELRNRYAFTLRAT 2872
Score = 35.0 bits (79), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 18/94 (19%)
Query: 17 IVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGY 76
+V V + P G+ + + +RA+D D G N V Y I+ KDR + DGY
Sbjct: 1248 VVSVREEQPPGTEVAR-VRALDTDLGENASVTYTIL--------------KDRDS--DGY 1290
Query: 77 SYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ F+I+ P G + LD E+ Y V++ A+
Sbjct: 1291 NVFTID-PITGMIRTKAVLDHEERNVYRVSVKAT 1323
>gi|326429213|gb|EGD74783.1| hypothetical protein PTSG_07016 [Salpingoeca sp. ATCC 50818]
Length = 8457
Score = 41.2 bits (95), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 21/96 (21%)
Query: 14 IPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVV 73
+P V V + T V S I + L A D D G NG VE+F+ ++ N
Sbjct: 3751 VPNAVDVIETTAVPSRIVQ-LLAYDLDTGANGDVEFFLNSTRPAN--------------- 3794
Query: 74 DGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
+ F+++ QG V ++ LDFE T+ Y+VT+VA
Sbjct: 3795 ---APFAVS--QQGMVFLSGPLDFEMTKEYVVTVVA 3825
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 12/93 (12%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V S+ +PVG T+ + + A DAD NG V + + + TA G G V V ++
Sbjct: 5675 VVTSEASPVG-TVLRQVVAHDADDNANGQVRFGL-----HDTTTASG-GGSTVATVGPFT 5727
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ G + + + LD+E Q Y +T+VA+
Sbjct: 5728 MYG-----NGSLVLTQPLDYEVQQTYTLTVVAT 5755
>gi|113206102|ref|NP_001038119.1| protocadherin-15 precursor [Gallus gallus]
gi|85725331|gb|ABC79283.1| protocadherin-15-CD2/CD3 isoform 1 [Gallus gallus]
Length = 2192
Score = 41.2 bits (95), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 46/97 (47%), Gaps = 19/97 (19%)
Query: 18 VRVSDLTPVGSTIFK----NLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVV 73
V V++LTPVG+TIF N A D D G NG +EY I + N T++
Sbjct: 154 VAVNELTPVGTTIFTGFSGNNGATDIDDGPNGQIEYVI--QYNPNDKTSNRT-------- 203
Query: 74 DGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + L++E+ RY V + A+
Sbjct: 204 -----FDIPLTLSGAVVLRERLNYEEKTRYFVIVQAN 235
>gi|432099155|gb|ELK28528.1| Protocadherin-15 [Myotis davidii]
Length = 351
Score = 41.2 bits (95), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 43/95 (45%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I + D D D
Sbjct: 150 VNELTPVGTTIFTGFAGDNGATDIDDGPNGQIEYVIQYNPD------DPTSNDT------ 197
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E RY V I A+
Sbjct: 198 ---FEIPLMLTGNVVLRKRLNYEDKTRYYVIIQAN 229
>gi|395501629|ref|XP_003755194.1| PREDICTED: cadherin-related family member 1 [Sarcophilus harrisii]
Length = 861
Score = 41.2 bits (95), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 24/97 (24%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P I+ V + TP G++IFK ++AVD D G G V YF+ +N+ T + DR
Sbjct: 141 PYIILVPEDTPAGNSIFK-VQAVDKDTGSGGSVTYFL-----QNLLT-NKFTMDR----- 188
Query: 75 GYSYFSINLPHQG--QVTVNRSLDFEKTQRYLVTIVA 109
H G ++ +LD+EK++ + VT+VA
Sbjct: 189 ----------HSGVLRIRAGATLDYEKSRTHFVTVVA 215
>gi|432922377|ref|XP_004080322.1| PREDICTED: protocadherin-15-like [Oryzias latipes]
Length = 2269
Score = 41.2 bits (95), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 45/97 (46%), Gaps = 19/97 (19%)
Query: 18 VRVSDLTPVGSTIFK----NLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVV 73
V +S+LTPVG+TIF N A D D G NG +EY I + TA+
Sbjct: 178 VSISELTPVGTTIFSGFSGNNGATDIDDGPNGQIEYTI--QYNPKDPTANRT-------- 227
Query: 74 DGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + L++E RYLV I A+
Sbjct: 228 -----FDIPLTLFGSVVLRERLNYEDITRYLVIIQAN 259
>gi|432104085|gb|ELK30915.1| Protocadherin Fat 4 [Myotis davidii]
Length = 2711
Score = 41.2 bits (95), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 44/93 (47%), Gaps = 22/93 (23%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V +S+ PV S FK ++A D D+G NG + Y I + NIG A G+ D
Sbjct: 1003 VTLSESEPVNSRFFK-VQAFDKDSGANGEIAYSIA---EGNIGDAFGIFPD--------- 1049
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
GQ+ + LD E RY++ +VAS
Sbjct: 1050 ---------GQLYIKSELDRELQDRYVLLVVAS 1073
>gi|162417991|ref|NP_001104793.1| protocadherin Fat 3 precursor [Gallus gallus]
Length = 4557
Score = 41.2 bits (95), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 49/96 (51%), Gaps = 21/96 (21%)
Query: 12 RTIPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVT 71
+T P V VS+ PVG+TI + ++A DAD+G NG V Y I + G AD
Sbjct: 728 KTFPTDVMVSEDLPVGATILR-IKAYDADSGFNGKVVYTI------SDGNAD-------- 772
Query: 72 VVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTI 107
S F+I++ G + V LD EKT Y++ I
Sbjct: 773 -----SCFNIDI-ETGVLKVLMPLDREKTDLYILNI 802
>gi|363746707|ref|XP_001235607.2| PREDICTED: protocadherin beta-14-like, partial [Gallus gallus]
Length = 460
Score = 41.2 bits (95), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 19/92 (20%)
Query: 19 RVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSY 78
RV + P GS + + + A+DAD G+NG V Y I+ S VG+ +S
Sbjct: 187 RVVENAPGGSLVLR-VMAMDADVGINGDVSYQIIQS----------VGQ-------SHSA 228
Query: 79 FSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F+IN + G++ V LDFE +Q++ +++ A+
Sbjct: 229 FAINSTN-GEIRVREPLDFEASQKHELSVRAT 259
>gi|300794778|ref|NP_001178135.1| cadherin-23 precursor [Bos taurus]
Length = 3354
Score = 41.2 bits (95), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 47/97 (48%), Gaps = 25/97 (25%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEY-FIVPSQDKNIGTADGVGKDRVTVV 73
P VR+ + TPVG+ IF + A D D G G V Y F PSQ
Sbjct: 136 PYSVRIPENTPVGTPIFI-VNATDPDLGAGGSVLYSFQPPSQ------------------ 176
Query: 74 DGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+F+++ +G VTV R LD+E TQ Y +T+ A+
Sbjct: 177 ----FFAVD-SARGIVTVIRELDYETTQAYQLTVNAT 208
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 40/85 (47%), Gaps = 23/85 (27%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
PVG+ I + A DAD+G L+EY ++VDG F+I+ P
Sbjct: 2416 PVGTVILT-VTATDADSGNFALIEY---------------------SLVDGEGKFAIS-P 2452
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVA 109
G + V SLD EK Y++T +A
Sbjct: 2453 TTGDIYVLSSLDREKKDHYILTALA 2477
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 21/94 (22%)
Query: 14 IPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVV 73
+P+ V +S+ +P+ S + + L A DAD+G N L+ + I ++R
Sbjct: 1854 LPMNVTISENSPISSFVARIL-ASDADSGCNALLTFNITAGN-----------RERA--- 1898
Query: 74 DGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTI 107
FSIN G +TVNR LD E+ Y +TI
Sbjct: 1899 -----FSINA-TTGIITVNRPLDRERIPEYRLTI 1926
Score = 34.3 bits (77), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Query: 12 RTIPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFI---VPSQDKNIGTADGV 65
+ +P + V + TP G ++++ + A+D D G+NGLV Y + +P D I ++ GV
Sbjct: 891 QNLPFVAEVLEGTPAGVSVYQ-VVAIDLDEGLNGLVSYRMQVGMPRMDFVINSSSGV 946
>gi|296472179|tpg|DAA14294.1| TPA: cadherin-23-like [Bos taurus]
Length = 3354
Score = 41.2 bits (95), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 47/97 (48%), Gaps = 25/97 (25%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEY-FIVPSQDKNIGTADGVGKDRVTVV 73
P VR+ + TPVG+ IF + A D D G G V Y F PSQ
Sbjct: 136 PYSVRIPENTPVGTPIFI-VNATDPDLGAGGSVLYSFQPPSQ------------------ 176
Query: 74 DGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+F+++ +G VTV R LD+E TQ Y +T+ A+
Sbjct: 177 ----FFAVD-SARGIVTVIRELDYETTQAYQLTVNAT 208
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 40/85 (47%), Gaps = 23/85 (27%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
PVG+ I + A DAD+G L+EY ++VDG F+I+ P
Sbjct: 2416 PVGTVILT-VTATDADSGNFALIEY---------------------SLVDGEGKFAIS-P 2452
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVA 109
G + V SLD EK Y++T +A
Sbjct: 2453 TTGDIYVLSSLDREKKDHYILTALA 2477
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 21/94 (22%)
Query: 14 IPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVV 73
+P+ V +S+ +P+ S + + L A DAD+G N L+ + I ++R
Sbjct: 1854 LPMNVTISENSPISSFVARIL-ASDADSGCNALLTFNITAGN-----------RERA--- 1898
Query: 74 DGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTI 107
FSIN G +TVNR LD E+ Y +TI
Sbjct: 1899 -----FSINA-TTGIITVNRPLDRERIPEYRLTI 1926
Score = 34.3 bits (77), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Query: 12 RTIPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFI---VPSQDKNIGTADGV 65
+ +P + V + TP G ++++ + A+D D G+NGLV Y + +P D I ++ GV
Sbjct: 891 QNLPFVAEVLEGTPAGVSVYQ-VVAIDLDEGLNGLVSYRMQVGMPRMDFVINSSSGV 946
>gi|426246690|ref|XP_004017125.1| PREDICTED: cadherin-12 [Ovis aries]
Length = 794
Score = 41.2 bits (95), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 17/93 (18%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
++V + +PVGS I + +RAVD D G N +EY IVP N+ D VT D
Sbjct: 276 LKVPESSPVGSAIGR-IRAVDPDFGQNAEIEYNIVPGDGGNLF-------DIVTDEDT-- 325
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+G + + + LDFE + Y + AS
Sbjct: 326 -------QEGVIKLKKPLDFETKKAYTFKVEAS 351
>gi|149021384|gb|EDL78847.1| rCG59113 [Rattus norvegicus]
Length = 4589
Score = 41.2 bits (95), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 43/86 (50%), Gaps = 18/86 (20%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
P GS + + +RA D D+GVNG V Y + SQD +I + F+IN+
Sbjct: 2824 PAGSRVIQ-VRASDLDSGVNGQVMYSLDQSQDADIIES----------------FAINM- 2865
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVAS 110
G +T + LD E+ Y + +VAS
Sbjct: 2866 ETGWITTLKELDHEERASYQIKVVAS 2891
>gi|332688250|ref|NP_001193887.1| cadherin-12 precursor [Bos taurus]
gi|296475699|tpg|DAA17814.1| TPA: cadherin 12, type 2 (N-cadherin 2) [Bos taurus]
Length = 794
Score = 41.2 bits (95), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 17/93 (18%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
++V + +PVGS I + +RAVD D G N +EY IVP N+ D VT D
Sbjct: 276 LKVPESSPVGSAIGR-IRAVDPDFGQNAEIEYNIVPGDGGNLF-------DIVTDEDT-- 325
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+G + + + LDFE + Y + AS
Sbjct: 326 -------QEGVIKLKKPLDFETKKAYTFKVEAS 351
>gi|26331732|dbj|BAC29596.1| unnamed protein product [Mus musculus]
Length = 802
Score = 41.2 bits (95), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 19/92 (20%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
++ + +P+G I + A D D GVNG + Y + +DG+ K
Sbjct: 250 AQIPEDSPIGFLII-TVSATDKDIGVNGQISYSL-------FQVSDGISK---------- 291
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
FSI+ P G+V + LDFEKTQ Y + I A
Sbjct: 292 TFSIH-PLTGEVRLKEHLDFEKTQSYEINIEA 322
>gi|17865345|ref|NP_446096.1| cadherin-23 precursor [Rattus norvegicus]
gi|17365948|sp|P58365.1|CAD23_RAT RecName: Full=Cadherin-23; AltName: Full=Otocadherin; Flags:
Precursor
gi|14625443|dbj|BAB61904.1| KIAA1774 protein [Rattus norvegicus]
Length = 3317
Score = 41.2 bits (95), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 47/97 (48%), Gaps = 25/97 (25%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEY-FIVPSQDKNIGTADGVGKDRVTVV 73
P VR+ + TPVG+ IF + A D D G G V Y F PSQ
Sbjct: 136 PYSVRIPENTPVGTPIFI-VNATDPDLGAGGSVLYSFQPPSQ------------------ 176
Query: 74 DGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+F+I+ +G VTV R LD+E TQ Y +T+ A+
Sbjct: 177 ----FFAID-SARGIVTVIRELDYEVTQAYQLTVNAT 208
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 23/84 (27%)
Query: 26 VGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPH 85
VG+ I + + A DAD+G L+EY ++VDG F+IN P+
Sbjct: 2415 VGTVILR-VTATDADSGNFALIEY---------------------SLVDGEGKFAIN-PN 2451
Query: 86 QGQVTVNRSLDFEKTQRYLVTIVA 109
G + V SLD EK Y++T +A
Sbjct: 2452 TGDIYVLSSLDREKKDHYILTALA 2475
Score = 35.0 bits (79), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 21/99 (21%)
Query: 12 RTIPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVT 71
+ +P + V + TP G ++++ + A+D D G+NGLV Y + VG R+
Sbjct: 889 QNLPFVAEVLEGTPAGVSVYQ-VVAIDLDEGLNGLVSYRM------------QVGMPRMD 935
Query: 72 VVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F IN G VT LD E+ Y + +VAS
Sbjct: 936 -------FVIN-STSGVVTTTAELDRERIAEYQLRVVAS 966
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 18/94 (19%)
Query: 17 IVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGY 76
I+ + + P+ S +++ + A D D G+NG V Y + K+ G D +
Sbjct: 2617 ILHIKEEIPLRSNVYE-VYATDKDEGLNGAVRYSFL----KSTGNRD------------W 2659
Query: 77 SYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
YF+I+ P G + + LD EK Y + +VAS
Sbjct: 2660 EYFTID-PISGLIQTAQRLDREKQAVYSLILVAS 2692
>gi|344246426|gb|EGW02530.1| Protocadherin-15 [Cricetulus griseus]
Length = 1827
Score = 41.2 bits (95), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 41/95 (43%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I D D
Sbjct: 104 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVI------QYNPEDPTSNDT------ 151
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E RY V I A+
Sbjct: 152 ---FEIPLMLTGNVVLRKRLNYEDKTRYYVIIQAN 183
>gi|301753499|ref|XP_002912636.1| PREDICTED: protocadherin gamma-B6-like [Ailuropoda melanoleuca]
Length = 905
Score = 41.2 bits (95), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 43/92 (46%), Gaps = 19/92 (20%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V VS+ P GS++ + + A D D GVN V Y+ R T
Sbjct: 249 VSVSENLPPGSSVLQ-VTATDKDEGVNAEVNYYF-----------------RSTAQSTRH 290
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
FS++ G +T N+SLDFE T+RY + + A
Sbjct: 291 TFSLD-EKTGMITNNQSLDFEDTERYTMEVEA 321
>gi|218505729|ref|NP_001136212.1| protocadherin-15 isoform CD1-7 precursor [Mus musculus]
Length = 1933
Score = 41.2 bits (95), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 41/95 (43%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I D D
Sbjct: 156 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVI------QYNPEDPTSNDT------ 203
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E RY V I A+
Sbjct: 204 ---FEIPLMLTGNVVLRKRLNYEDKTRYYVIIQAN 235
>gi|218505722|ref|NP_001136209.1| protocadherin-15 isoform CD1-6 precursor [Mus musculus]
Length = 1867
Score = 41.2 bits (95), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 41/95 (43%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I D D
Sbjct: 156 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVI------QYNPEDPTSNDT------ 203
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E RY V I A+
Sbjct: 204 ---FEIPLMLTGNVVLRKRLNYEDKTRYYVIIQAN 235
>gi|218505717|ref|NP_001136208.1| protocadherin-15 isoform CD1-4 precursor [Mus musculus]
Length = 1936
Score = 41.2 bits (95), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 41/95 (43%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I D D
Sbjct: 156 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVI------QYNPEDPTSNDT------ 203
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E RY V I A+
Sbjct: 204 ---FEIPLMLTGNVVLRKRLNYEDKTRYYVIIQAN 235
>gi|13929168|ref|NP_114007.1| protocadherin Fat 1 precursor [Rattus norvegicus]
gi|4426629|gb|AAD20459.1| protocadherin [Rattus norvegicus]
Length = 4589
Score = 41.2 bits (95), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 43/86 (50%), Gaps = 18/86 (20%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
P GS + + +RA D D+GVNG V Y + SQD +I + F+IN+
Sbjct: 2824 PAGSRVIQ-VRASDLDSGVNGQVMYSLDQSQDADIIES----------------FAINM- 2865
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVAS 110
G +T + LD E+ Y + +VAS
Sbjct: 2866 ETGWITTLKELDHEERASYQIKVVAS 2891
>gi|410926607|ref|XP_003976769.1| PREDICTED: cadherin-7-like [Takifugu rubripes]
Length = 815
Score = 41.2 bits (95), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 50/103 (48%), Gaps = 25/103 (24%)
Query: 11 KRTIPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRV 70
+R+ VR S+L ST+ +RAVD D G N ++Y I+ DG
Sbjct: 270 RRSYQFSVRESELV---STVVAKIRAVDPDEGPNAELDYRIL----------DG------ 310
Query: 71 TVVDGYSYFSI---NLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
DG FSI + +G +T++++LDFE Y++ + AS
Sbjct: 311 ---DGLGIFSITTDSHTQEGLITLHKNLDFETKSSYMLRVEAS 350
>gi|354485686|ref|XP_003505014.1| PREDICTED: protocadherin-15 isoform 7 [Cricetulus griseus]
Length = 1926
Score = 41.2 bits (95), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 41/95 (43%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I D D
Sbjct: 156 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVI------QYNPEDPTSNDT------ 203
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E RY V I A+
Sbjct: 204 ---FEIPLMLTGNVVLRKRLNYEDKTRYYVIIQAN 235
>gi|354485674|ref|XP_003505008.1| PREDICTED: protocadherin-15 isoform 1 [Cricetulus griseus]
Length = 1931
Score = 41.2 bits (95), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 41/95 (43%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I D D
Sbjct: 156 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVI------QYNPEDPTSNDT------ 203
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E RY V I A+
Sbjct: 204 ---FEIPLMLTGNVVLRKRLNYEDKTRYYVIIQAN 235
>gi|341941234|sp|Q99PJ1.2|PCD15_MOUSE RecName: Full=Protocadherin-15; Flags: Precursor
Length = 1943
Score = 41.2 bits (95), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 41/95 (43%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I D D
Sbjct: 161 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVI------QYNPEDPTSNDT------ 208
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E RY V I A+
Sbjct: 209 ---FEIPLMLTGNVVLRKRLNYEDKTRYYVIIQAN 240
>gi|326914512|ref|XP_003203569.1| PREDICTED: protocadherin Fat 3-like, partial [Meleagris gallopavo]
Length = 1203
Score = 41.2 bits (95), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 48/96 (50%), Gaps = 21/96 (21%)
Query: 12 RTIPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVT 71
+T P V VS+ PVG+TI + ++A DAD+G NG V Y I +DG R
Sbjct: 728 KTFPTDVMVSEDLPVGATILR-IKAYDADSGFNGRVVYTI----------SDGNADSR-- 774
Query: 72 VVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTI 107
F+I++ G + V LD EKT Y++ I
Sbjct: 775 -------FNIDI-ETGVLKVLMPLDREKTDLYILNI 802
>gi|440898521|gb|ELR50004.1| Cadherin-12, partial [Bos grunniens mutus]
Length = 619
Score = 41.2 bits (95), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 17/93 (18%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
++V + +PVGS I + +RAVD D G N +EY IVP N+ D VT D
Sbjct: 101 LKVPESSPVGSAIGR-IRAVDPDFGQNAEIEYNIVPGDGGNLF-------DIVTDEDT-- 150
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+G + + + LDFE + Y + AS
Sbjct: 151 -------QEGVIKLKKPLDFETKKAYTFKVEAS 176
>gi|12483917|gb|AAG53891.1|AF281899_1 protocadherin [Mus musculus]
Length = 1943
Score = 41.2 bits (95), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 41/95 (43%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I D D
Sbjct: 161 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVI------QYNPEDPTSNDT------ 208
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E RY V I A+
Sbjct: 209 ---FEIPLMLTGNVVLRKRLNYEDKTRYYVIIQAN 240
>gi|354485680|ref|XP_003505011.1| PREDICTED: protocadherin-15 isoform 4 [Cricetulus griseus]
Length = 1929
Score = 41.2 bits (95), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 41/95 (43%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I D D
Sbjct: 156 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVI------QYNPEDPTSNDT------ 203
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E RY V I A+
Sbjct: 204 ---FEIPLMLTGNVVLRKRLNYEDKTRYYVIIQAN 235
>gi|111074522|ref|NP_075604.2| protocadherin-15 isoform CD1-1 precursor [Mus musculus]
gi|225000578|gb|AAI72646.1| Protocadherin 15 [synthetic construct]
Length = 1943
Score = 41.2 bits (95), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 41/95 (43%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I D D
Sbjct: 161 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVI------QYNPEDPTSNDT------ 208
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E RY V I A+
Sbjct: 209 ---FEIPLMLTGNVVLRKRLNYEDKTRYYVIIQAN 240
>gi|85725287|gb|ABC79261.1| protocadherin-15-CD1 isoform 4 [Mus musculus]
Length = 1936
Score = 41.2 bits (95), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 41/95 (43%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I D D
Sbjct: 156 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVI------QYNPEDPTSNDT------ 203
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E RY V I A+
Sbjct: 204 ---FEIPLMLTGNVVLRKRLNYEDKTRYYVIIQAN 235
>gi|354485688|ref|XP_003505015.1| PREDICTED: protocadherin-15 isoform 8 [Cricetulus griseus]
Length = 1906
Score = 41.2 bits (95), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 41/95 (43%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I D D
Sbjct: 134 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVI------QYNPEDPTSNDT------ 181
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E RY V I A+
Sbjct: 182 ---FEIPLMLTGNVVLRKRLNYEDKTRYYVIIQAN 213
>gi|344272204|ref|XP_003407925.1| PREDICTED: cadherin-12 [Loxodonta africana]
Length = 794
Score = 41.2 bits (95), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 17/93 (18%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
++V + +PVGS I + +RAVD D G N +EY IVP N+ D VT D
Sbjct: 276 LKVPESSPVGSAIGR-IRAVDPDFGKNAEIEYNIVPGDGGNLF-------DIVTDEDT-- 325
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+G + + + LDFE + Y + AS
Sbjct: 326 -------QEGVIKLKKPLDFETKKAYTFKVEAS 351
>gi|218505715|ref|NP_001136207.1| protocadherin-15 isoform CD1-2 precursor [Mus musculus]
Length = 1938
Score = 41.2 bits (95), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 41/95 (43%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I D D
Sbjct: 156 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVI------QYNPEDPTSNDT------ 203
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E RY V I A+
Sbjct: 204 ---FEIPLMLTGNVVLRKRLNYEDKTRYYVIIQAN 235
>gi|354485682|ref|XP_003505012.1| PREDICTED: protocadherin-15 isoform 5 [Cricetulus griseus]
Length = 1860
Score = 41.2 bits (95), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 41/95 (43%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I D D
Sbjct: 156 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVI------QYNPEDPTSNDT------ 203
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E RY V I A+
Sbjct: 204 ---FEIPLMLTGNVVLRKRLNYEDKTRYYVIIQAN 235
Score = 34.7 bits (78), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 50/108 (46%), Gaps = 25/108 (23%)
Query: 21 SDLTPVGSTIFKNLRAVDADAGVNGLVEY---------FIVPSQDKNIGTADGVGKDRVT 71
+D++P S I L AVDAD G NG + Y FI+ + A GV
Sbjct: 520 TDMSPGDSVI--QLTAVDADEGSNGEISYEILVGAQGDFIINRTTGLVSIAPGV-----E 572
Query: 72 VVDGYSYF-----SINLP----HQGQVTVNRSLDFEKTQRYLVTIVAS 110
++ G +Y S N P G +T+ ++LD E T RY++ + AS
Sbjct: 573 LIVGQTYALTVQASDNAPPAERSTGILTLGKALDRESTDRYILIVTAS 620
>gi|158297323|ref|XP_317578.4| AGAP007905-PA [Anopheles gambiae str. PEST]
gi|157015140|gb|EAA12903.4| AGAP007905-PA [Anopheles gambiae str. PEST]
Length = 2864
Score = 41.2 bits (95), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 18/94 (19%)
Query: 17 IVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGY 76
+V V + P+G+ + K +RA+D D G N + Y I+ +D DGY
Sbjct: 640 VVSVREEQPIGTEVVK-VRAIDRDHGQNASISYSILKGRDS----------------DGY 682
Query: 77 SYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
FSI+ P G + SLD E+ Y + + A+
Sbjct: 683 GMFSID-PMSGVIRTKTSLDHEEKTIYRLAVAAT 715
Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 50/116 (43%), Gaps = 11/116 (9%)
Query: 1 LTCTVKVSNRKRTIPVI------VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPS 54
LT V+V + P+ + V + TP S I + + A DAD G N + Y I+
Sbjct: 393 LTILVEVQDVNDNAPIFEKNEYAISVIESTPSNSQILQ-VSATDADTGNNARLTYKILGE 451
Query: 55 QDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ G + V + + F P+ G + + LD E +RY +T++ S
Sbjct: 452 DHQRTGKSTQPASPDEPVAEIFGIF----PNSGWIYLRTKLDREVKERYNITVIVS 503
Score = 34.3 bits (77), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 47/95 (49%), Gaps = 15/95 (15%)
Query: 16 VIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V + V + +GS +++ A D D+G++G++ Y + G + + R
Sbjct: 303 VRISVPENVEIGSPLYE-ANAQDKDSGMSGVITYMLA-------GQGNTLSGARS----- 349
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
S FS++ G +T+ R LD+E QR+ + + AS
Sbjct: 350 -SLFSMD-SRSGHLTLARPLDYESMQRHTLVVTAS 382
>gi|85725297|gb|ABC79266.1| protocadherin-15-CD1 isoform 7 [Mus musculus]
Length = 1933
Score = 41.2 bits (95), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 41/95 (43%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I D D
Sbjct: 156 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVI------QYNPEDPTSNDT------ 203
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E RY V I A+
Sbjct: 204 ---FEIPLMLTGNVVLRKRLNYEDKTRYYVIIQAN 235
>gi|85725291|gb|ABC79263.1| protocadherin-15-CD1 isoform 6 [Mus musculus]
Length = 1867
Score = 41.2 bits (95), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 41/95 (43%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I D D
Sbjct: 156 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVI------QYNPEDPTSNDT------ 203
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E RY V I A+
Sbjct: 204 ---FEIPLMLTGNVVLRKRLNYEDKTRYYVIIQAN 235
>gi|354485676|ref|XP_003505009.1| PREDICTED: protocadherin-15 isoform 2 [Cricetulus griseus]
Length = 1909
Score = 41.2 bits (95), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 41/95 (43%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I D D
Sbjct: 134 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVI------QYNPEDPTSNDT------ 181
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E RY V I A+
Sbjct: 182 ---FEIPLMLTGNVVLRKRLNYEDKTRYYVIIQAN 213
>gi|405962038|gb|EKC27752.1| Protocadherin Fat 4 [Crassostrea gigas]
Length = 10119
Score = 41.2 bits (95), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 15/74 (20%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
P+G T+++ + A DAD NG + Y ++ DG T+ DG +F+IN P
Sbjct: 150 PIGLTVYQQITATDADQSNNGQITYSLL--------AGDG------TINDGSRFFAIN-P 194
Query: 85 HQGQVTVNRSLDFE 98
G +TV +LD+E
Sbjct: 195 TTGVLTVKETLDYE 208
>gi|85725295|gb|ABC79265.1| protocadherin-15-CD1 isoform 9 [Mus musculus]
Length = 1916
Score = 41.2 bits (95), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 41/95 (43%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I D D
Sbjct: 134 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVI------QYNPEDPTSNDT------ 181
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E RY V I A+
Sbjct: 182 ---FEIPLMLTGNVVLRKRLNYEDKTRYYVIIQAN 213
>gi|218505727|ref|NP_001136211.1| protocadherin-15 isoform CD1-9 precursor [Mus musculus]
Length = 1916
Score = 41.2 bits (95), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 41/95 (43%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I D D
Sbjct: 134 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVI------QYNPEDPTSNDT------ 181
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E RY V I A+
Sbjct: 182 ---FEIPLMLTGNVVLRKRLNYEDKTRYYVIIQAN 213
>gi|85725299|gb|ABC79267.1| protocadherin-15-CD1 isoform 10 [Mus musculus]
Length = 1913
Score = 41.2 bits (95), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 41/95 (43%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I D D
Sbjct: 134 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVI------QYNPEDPTSNDT------ 181
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E RY V I A+
Sbjct: 182 ---FEIPLMLTGNVVLRKRLNYEDKTRYYVIIQAN 213
>gi|85725282|gb|ABC79259.1| protocadherin-15-CD1 isoform 2 [Mus musculus]
Length = 1938
Score = 41.2 bits (95), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 41/95 (43%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I D D
Sbjct: 156 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVI------QYNPEDPTSNDT------ 203
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E RY V I A+
Sbjct: 204 ---FEIPLMLTGNVVLRKRLNYEDKTRYYVIIQAN 235
>gi|218505731|ref|NP_001136213.1| protocadherin-15 isoform CD1-10 precursor [Mus musculus]
Length = 1913
Score = 41.2 bits (95), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 41/95 (43%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I D D
Sbjct: 134 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVI------QYNPEDPTSNDT------ 181
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E RY V I A+
Sbjct: 182 ---FEIPLMLTGNVVLRKRLNYEDKTRYYVIIQAN 213
>gi|326673293|ref|XP_003199824.1| PREDICTED: protocadherin-10-like [Danio rerio]
Length = 791
Score = 40.8 bits (94), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 19/93 (20%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V + + P+G+ + K L A D D G NG + Y V KNI + Y
Sbjct: 251 VSLRENAPLGTLVIK-LNATDLDEGQNGEIVYSFV----KNI--------------EKYI 291
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
Y + +L + G++ V SLDFEK Y + ++AS
Sbjct: 292 YDTFDLDNTGEIRVKGSLDFEKNNVYRIAVMAS 324
>gi|85725303|gb|ABC79269.1| protocadherin-15-CD2 isoform 2 [Mus musculus]
Length = 1518
Score = 40.8 bits (94), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 41/95 (43%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I D D
Sbjct: 156 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVI------QYNPEDPTSNDT------ 203
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E RY V I A+
Sbjct: 204 ---FEIPLMLTGNVVLRKRLNYEDKTRYYVIIQAN 235
>gi|126291072|ref|XP_001378094.1| PREDICTED: protocadherin-12 [Monodelphis domestica]
Length = 1182
Score = 40.8 bits (94), Expect = 0.092, Method: Composition-based stats.
Identities = 39/118 (33%), Positives = 50/118 (42%), Gaps = 30/118 (25%)
Query: 2 TCTVKVS--NRKRTIPVIVRVSDLTPVGS-----TIFKNLRAVDADAGVNGLVEYFI--- 51
T VKVS + PV S VG T+ NL A D D G NG VE+ +
Sbjct: 224 TSLVKVSVLDSNDNSPVFAESSLALEVGEDTIPGTLLLNLTATDPDEGPNGEVEFSLGKH 283
Query: 52 VPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
VP +N FSI+ GQ+T+NR LD+EKT Y + + A
Sbjct: 284 VPPDVQNT-------------------FSID-AQTGQITLNRPLDYEKTPAYEIDVQA 321
>gi|85725309|gb|ABC79272.1| protocadherin-15-CD2 isoform 5 [Mus musculus]
Length = 334
Score = 40.8 bits (94), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 41/95 (43%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I D D
Sbjct: 156 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVI------QYNPEDPTSNDT------ 203
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E RY V I A+
Sbjct: 204 ---FEIPLMLTGNVVLRKRLNYEDKTRYYVIIQAN 235
>gi|218505745|ref|NP_001136219.1| protocadherin-15 isoform SI-1 precursor [Mus musculus]
gi|74226398|dbj|BAE23903.1| unnamed protein product [Mus musculus]
gi|85725323|gb|ABC79279.1| protocadherin-15-secreted isoform 1 [Mus musculus]
Length = 1176
Score = 40.8 bits (94), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 41/95 (43%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I D D
Sbjct: 161 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVI------QYNPEDPTSNDT------ 208
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E RY V I A+
Sbjct: 209 ---FEIPLMLTGNVVLRKRLNYEDKTRYYVIIQAN 240
>gi|449278207|gb|EMC86141.1| Protocadherin Fat 4, partial [Columba livia]
Length = 4990
Score = 40.8 bits (94), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 52/113 (46%), Gaps = 28/113 (24%)
Query: 4 TVKVSNRKRTIPVIVRVS------DLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDK 57
TV V + PV ++S + PV S FK ++A D D+GVNG + Y I+ +
Sbjct: 989 TVSVHDVNDNPPVFDQLSYEITILESEPVNSRFFK-VQASDKDSGVNGEIAYSII---EG 1044
Query: 58 NIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
N G A G+ D GQ+ + LD E +RY++ +VAS
Sbjct: 1045 NTGDAFGIFPD------------------GQLYIKSELDRELQERYILLVVAS 1079
>gi|347543889|gb|AEP02517.1| PCDH15, partial [Eonycteris spelaea]
Length = 1901
Score = 40.8 bits (94), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 42/95 (44%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I + D
Sbjct: 144 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQYNPDDPTSN-------------- 189
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ F I L G V + + L++E RY V I A+
Sbjct: 190 -NTFEIPLMLTGNVVLRKRLNYEDKTRYFVIIQAN 223
>gi|85725327|gb|ABC79281.1| protocadherin-15-secreted isoform 3 [Mus musculus]
Length = 650
Score = 40.8 bits (94), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 41/95 (43%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I D D
Sbjct: 156 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVI------QYNPEDPTSNDT------ 203
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E RY V I A+
Sbjct: 204 ---FEIPLMLTGNVVLRKRLNYEDKTRYYVIIQAN 235
>gi|417407147|gb|JAA50198.1| Putative cadherin egf lag seven-pass g-type receptor [Desmodus
rotundus]
Length = 4593
Score = 40.8 bits (94), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 42/86 (48%), Gaps = 18/86 (20%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
P GS + + +RA D D+G NG V Y + PSQ +I + F+IN+
Sbjct: 2821 PGGSRVIQ-VRASDLDSGTNGQVMYSLDPSQSVDITES----------------FAINM- 2862
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVAS 110
G +T + LD EK Y + +VAS
Sbjct: 2863 ETGWITTLKELDHEKRDNYQIKVVAS 2888
>gi|85725319|gb|ABC79277.1| protocadherin-15-CD3 isoform 2 [Mus musculus]
Length = 1677
Score = 40.8 bits (94), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 41/95 (43%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I D D
Sbjct: 156 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVI------QYNPEDPTSNDT------ 203
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E RY V I A+
Sbjct: 204 ---FEIPLMLTGNVVLRKRLNYEDKTRYYVIIQAN 235
>gi|354485678|ref|XP_003505010.1| PREDICTED: protocadherin-15 isoform 3 [Cricetulus griseus]
Length = 1672
Score = 40.8 bits (94), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 41/95 (43%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I D D
Sbjct: 156 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVI------QYNPEDPTSNDT------ 203
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E RY V I A+
Sbjct: 204 ---FEIPLMLTGNVVLRKRLNYEDKTRYYVIIQAN 235
>gi|85725284|gb|ABC79260.1| protocadherin-15-CD1 isoform 3 [Mus musculus]
gi|85725289|gb|ABC79262.1| protocadherin-15-CD1 isoform 5 [Mus musculus]
Length = 684
Score = 40.8 bits (94), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 41/95 (43%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I D D
Sbjct: 156 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVI------QYNPEDPTSNDT------ 203
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E RY V I A+
Sbjct: 204 ---FEIPLMLTGNVVLRKRLNYEDKTRYYVIIQAN 235
>gi|85725317|gb|ABC79276.1| protocadherin-15-CD3 isoform 1 [Mus musculus]
Length = 1682
Score = 40.8 bits (94), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 41/95 (43%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I D D
Sbjct: 161 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVI------QYNPEDPTSNDT------ 208
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E RY V I A+
Sbjct: 209 ---FEIPLMLTGNVVLRKRLNYEDKTRYYVIIQAN 240
>gi|218505743|ref|NP_001136218.1| protocadherin-15 isoform CD3-1 precursor [Mus musculus]
Length = 1682
Score = 40.8 bits (94), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 41/95 (43%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I D D
Sbjct: 161 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVI------QYNPEDPTSNDT------ 208
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E RY V I A+
Sbjct: 209 ---FEIPLMLTGNVVLRKRLNYEDKTRYYVIIQAN 240
>gi|85725315|gb|ABC79275.1| protocadherin-15-CD2 isoform 8 [Mus musculus]
Length = 981
Score = 40.8 bits (94), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 41/95 (43%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I D D
Sbjct: 156 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVI------QYNPEDPTSNDT------ 203
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E RY V I A+
Sbjct: 204 ---FEIPLMLTGNVVLRKRLNYEDKTRYYVIIQAN 235
>gi|218505747|ref|NP_001136220.1| protocadherin-15 isoform SI-2 precursor [Mus musculus]
gi|85725325|gb|ABC79280.1| protocadherin-15-secreted isoform 2 [Mus musculus]
Length = 1171
Score = 40.8 bits (94), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 41/95 (43%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I D D
Sbjct: 156 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVI------QYNPEDPTSNDT------ 203
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E RY V I A+
Sbjct: 204 ---FEIPLMLTGNVVLRKRLNYEDKTRYYVIIQAN 235
>gi|427798291|gb|JAA64597.1| Putative cadherin egf lag seven-pass g-type receptor, partial
[Rhipicephalus pulchellus]
Length = 3724
Score = 40.8 bits (94), Expect = 0.096, Method: Composition-based stats.
Identities = 28/90 (31%), Positives = 40/90 (44%), Gaps = 20/90 (22%)
Query: 20 VSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYF 79
VS++ PVGS I ++A D GVN + Y +V D +F
Sbjct: 3130 VSEVAPVGSPISAAIKATSRDVGVNAQITYALVAGND-------------------MGHF 3170
Query: 80 SINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
SI P G + V R LD+E+T Y + + A
Sbjct: 3171 SIE-PKTGVLRVARPLDYEETPSYQLAVEA 3199
>gi|218505773|ref|NP_001136232.1| protocadherin-15 isoform CD3-2 precursor [Mus musculus]
Length = 1677
Score = 40.8 bits (94), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 41/95 (43%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I D D
Sbjct: 156 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVI------QYNPEDPTSNDT------ 203
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E RY V I A+
Sbjct: 204 ---FEIPLMLTGNVVLRKRLNYEDKTRYYVIIQAN 235
>gi|218505737|ref|NP_001136215.1| protocadherin-15 isoform CD2-2 precursor [Mus musculus]
Length = 1518
Score = 40.8 bits (94), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 41/95 (43%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I D D
Sbjct: 156 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVI------QYNPEDPTSNDT------ 203
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E RY V I A+
Sbjct: 204 ---FEIPLMLTGNVVLRKRLNYEDKTRYYVIIQAN 235
>gi|62643091|ref|XP_229369.3| PREDICTED: cadherin-12-like [Rattus norvegicus]
gi|109466218|ref|XP_001062023.1| PREDICTED: cadherin-12-like [Rattus norvegicus]
Length = 794
Score = 40.8 bits (94), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 17/93 (18%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
++V + +PVGS I + +RAVD D G N +EY IVP N+ D VT D
Sbjct: 276 LKVPESSPVGSAIGR-IRAVDPDFGKNAEIEYNIVPGDGGNLF-------DIVTDEDT-- 325
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+G + + + LDFE + Y + AS
Sbjct: 326 -------QEGIIKLKKPLDFETKKAYTFKVEAS 351
>gi|149026451|gb|EDL82601.1| similar to cadherin 12, type 2 preproprotein (predicted) [Rattus
norvegicus]
Length = 570
Score = 40.8 bits (94), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 17/93 (18%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
++V + +PVGS I + +RAVD D G N +EY IVP N+ D VT D
Sbjct: 52 LKVPESSPVGSAIGR-IRAVDPDFGKNAEIEYNIVPGDGGNLF-------DIVTDEDT-- 101
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+G + + + LDFE + Y + AS
Sbjct: 102 -------QEGIIKLKKPLDFETKKAYTFKVEAS 127
>gi|56606025|ref|NP_001008420.1| cadherin-12 precursor [Mus musculus]
gi|81910017|sp|Q5RJH3.1|CAD12_MOUSE RecName: Full=Cadherin-12; Flags: Precursor
gi|55991463|gb|AAH86655.1| Cadherin 12 [Mus musculus]
Length = 794
Score = 40.8 bits (94), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 17/93 (18%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
++V + +PVGS I + +RAVD D G N +EY IVP N+ D VT D
Sbjct: 276 LKVPESSPVGSAIGR-IRAVDPDFGKNAEIEYNIVPGDGGNLF-------DIVTDEDT-- 325
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+G + + + LDFE + Y + AS
Sbjct: 326 -------QEGIIKLKKPLDFETKKAYTFKVEAS 351
>gi|218505733|ref|NP_001136214.1| protocadherin-15 isoform CD2-1 precursor [Mus musculus]
Length = 1790
Score = 40.8 bits (94), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 41/95 (43%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I D D
Sbjct: 161 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVI------QYNPEDPTSNDT------ 208
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E RY V I A+
Sbjct: 209 ---FEIPLMLTGNVVLRKRLNYEDKTRYYVIIQAN 240
>gi|85725301|gb|ABC79268.1| protocadherin-15-CD2 isoform 1 [Mus musculus]
Length = 1790
Score = 40.8 bits (94), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 41/95 (43%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I D D
Sbjct: 161 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVI------QYNPEDPTSNDT------ 208
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E RY V I A+
Sbjct: 209 ---FEIPLMLTGNVVLRKRLNYEDKTRYYVIIQAN 240
>gi|350594182|ref|XP_003133907.3| PREDICTED: cadherin-12 [Sus scrofa]
Length = 794
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 17/93 (18%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
++V + +P+GS I + +RAVD D G N +EY IVP N+ D VT D
Sbjct: 276 LKVPESSPIGSAIGR-IRAVDPDFGQNAEIEYNIVPGDGGNLF-------DIVTDEDT-- 325
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+G + + + LDFE + Y + AS
Sbjct: 326 -------QEGVIKLKKPLDFETKKAYTFKVEAS 351
>gi|403298927|ref|XP_003940251.1| PREDICTED: cadherin-10 [Saimiri boliviensis boliviensis]
Length = 788
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 17/95 (17%)
Query: 16 VIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
+ +RV + +PVG+ I +++A DAD G N VEY I+ DG G D +V
Sbjct: 274 IHLRVLESSPVGTAI-GSVKATDADTGKNAEVEYRII----------DGDGTDMFDIV-- 320
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ +G +TV + LDFE + Y + + A
Sbjct: 321 ----TEKDTQEGIITVKKPLDFESRRLYTLKVEAE 351
>gi|301608774|ref|XP_002933948.1| PREDICTED: cadherin-related family member 1-like [Xenopus
(Silurana) tropicalis]
Length = 873
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 46/97 (47%), Gaps = 24/97 (24%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P IV V + TP GS+IFK + AVD D G G + Y I
Sbjct: 142 PYIVTVPEDTPPGSSIFK-IEAVDKDTGSGGSITYIIQEMHS------------------ 182
Query: 75 GYSYFSINLPHQG--QVTVNRSLDFEKTQRYLVTIVA 109
S F+I+ H G ++ SLDFEK++ + V+++A
Sbjct: 183 --SKFTIDR-HSGVLRLKAGMSLDFEKSRTHFVSVLA 216
>gi|149412791|ref|XP_001507184.1| PREDICTED: cadherin-12 [Ornithorhynchus anatinus]
Length = 794
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 17/93 (18%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
++V + +PVGS I + +RAVD D G N +EY IVP N+ +
Sbjct: 276 LKVPESSPVGSAIGR-IRAVDPDLGKNAEIEYNIVPGDGGNL----------------FD 318
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ +G + + + LDFE + Y + AS
Sbjct: 319 IITDENTQEGVIKLKKPLDFETKKAYTFKVEAS 351
>gi|410949750|ref|XP_003981581.1| PREDICTED: cadherin-12 [Felis catus]
Length = 794
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 17/93 (18%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
++V + +P+GS I + +RAVD D G N +EY IVP N+ D VT D
Sbjct: 276 LKVPESSPIGSAIGR-IRAVDPDFGQNAEIEYNIVPGDGGNLF-------DIVTDEDT-- 325
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+G + + + LDFE + Y + AS
Sbjct: 326 -------QEGVIKLKKPLDFETKKAYTFKVEAS 351
>gi|348555724|ref|XP_003463673.1| PREDICTED: cadherin-12-like [Cavia porcellus]
Length = 794
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 17/93 (18%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
++V + +P+GS I + +RAVD D G N +EY IVP N+ D VT D
Sbjct: 276 LKVPESSPIGSAIGR-IRAVDPDFGQNAEIEYNIVPGDGGNLF-------DIVTDEDT-- 325
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+G + + + LDFE + Y + AS
Sbjct: 326 -------QEGVIKLKKPLDFETKKAYTFKVEAS 351
>gi|322800567|gb|EFZ21553.1| hypothetical protein SINV_02181 [Solenopsis invicta]
Length = 1368
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 20/96 (20%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P+I+RVS+ +GSTI+ NL A D D+G+NG + Y +V A+ K
Sbjct: 596 PIIIRVSERAAIGSTIY-NLTASDRDSGLNGDLRYGLV---------AEFPPK------- 638
Query: 75 GYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
YF+++ G +T+ + LD E+ Y++ + AS
Sbjct: 639 --GYFAVD-SLTGALTLAKQLDREERTEYVLILKAS 671
Score = 35.0 bits (79), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 18/94 (19%)
Query: 17 IVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGY 76
+V V + P G+ + + +RA+D D G N V Y I KDR + DGY
Sbjct: 384 VVSVREEQPTGTEVAR-VRALDTDLGENASVTYSI--------------SKDRDS--DGY 426
Query: 77 SYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ F+I+ P G + LD E+ Y V++ A+
Sbjct: 427 NVFTID-PITGMIRTKAVLDHEERNVYRVSVRAT 459
>gi|114600892|ref|XP_517720.2| PREDICTED: cadherin-12 isoform 2 [Pan troglodytes]
Length = 794
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 17/93 (18%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
++V + +P+GS I + +RAVD D G N +EY IVP N+ D VT D
Sbjct: 276 LKVPESSPIGSAIGR-IRAVDPDFGQNAEIEYNIVPGDGGNLF-------DIVTDEDT-- 325
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+G + + + LDFE + Y + AS
Sbjct: 326 -------QEGVIKLKKPLDFETKKAYTFKVEAS 351
>gi|221040610|dbj|BAH11982.1| unnamed protein product [Homo sapiens]
Length = 754
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 17/93 (18%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
++V + +P+GS I + +RAVD D G N +EY IVP N+ D VT D
Sbjct: 236 LKVPESSPIGSAIGR-IRAVDPDFGQNAEIEYNIVPGDGGNLF-------DIVTDEDT-- 285
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+G + + + LDFE + Y + AS
Sbjct: 286 -------QEGVIKLKKPLDFETKKAYTFKVEAS 311
>gi|194884197|ref|XP_001976182.1| GG20142 [Drosophila erecta]
gi|190659369|gb|EDV56582.1| GG20142 [Drosophila erecta]
Length = 3582
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 43/95 (45%), Gaps = 16/95 (16%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P V + PVG+T+ + A D+D GVN + Y + +G+ D
Sbjct: 901 PYSASVFEDAPVGTTVLV-VSATDSDVGVNAQITYSLNEESINGLGSPDP---------- 949
Query: 75 GYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
FSIN P G + N +LD E T YL+T+ A
Sbjct: 950 ----FSIN-PQTGAIVTNAALDRETTSGYLLTVTA 979
>gi|85725307|gb|ABC79271.1| protocadherin-15-CD2 isoform 4 [Mus musculus]
Length = 326
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 41/95 (43%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I D D
Sbjct: 156 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVI------QYNPEDPTSNDT------ 203
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E RY V I A+
Sbjct: 204 ---FEIPLMLTGNVVLRKRLNYEDKTRYYVIIQAN 235
>gi|109076806|ref|XP_001082276.1| PREDICTED: cadherin-12-like [Macaca mulatta]
gi|355749838|gb|EHH54176.1| Brain cadherin [Macaca fascicularis]
Length = 794
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 17/93 (18%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
++V + +P+GS I + +RAVD D G N +EY IVP N+ D VT D
Sbjct: 276 LKVPESSPIGSAIGR-IRAVDPDFGQNAEIEYNIVPGDGGNLF-------DIVTDEDT-- 325
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+G + + + LDFE + Y + AS
Sbjct: 326 -------QEGVIKLKKPLDFETKKAYTFKVEAS 351
>gi|431905037|gb|ELK10094.1| Protocadherin-15 [Pteropus alecto]
Length = 1134
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 42/95 (44%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I + D
Sbjct: 48 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQYNPDDPTSN-------------- 93
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ F I L G V + + L++E RY V I A+
Sbjct: 94 -NTFEIPLMLTGNVVLRKRLNYEDKTRYFVIIQAN 127
>gi|301621394|ref|XP_002940040.1| PREDICTED: hypothetical protein LOC100489805 [Xenopus (Silurana)
tropicalis]
Length = 5636
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 17/92 (18%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V +S+ P+ S++ L A D D G N + Y I + + N T S
Sbjct: 2726 VSISENAPINSSVII-LTATDKDEGTNAQITYSISKTSENNFYT---------------S 2769
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
F+IN P G++T+ SL+FE T+ Y +++ A
Sbjct: 2770 VFNIN-PVMGEITIKGSLNFEATEHYEMSVQA 2800
Score = 37.7 bits (86), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 17/92 (18%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V +S+ TP+ ST+ + + A D D G N + Y + V + S
Sbjct: 5032 VSISENTPINSTVLR-VNASDMDEGTNAQITY--------------SFSRTSVNSLHA-S 5075
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
FSIN P G++T N L+FE + Y +++ A
Sbjct: 5076 MFSIN-PTSGEITTNNLLNFEAKKDYEISVQA 5106
>gi|297747350|ref|NP_001177099.1| FAT tumor suppressor homolog 1 [Sus scrofa]
Length = 4588
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 18/86 (20%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
P GS + + +RA D D+G NG V Y + SQ V V++ F+IN+
Sbjct: 2823 PAGSRVIQ-IRASDLDSGTNGQVMYNLDQSQ-------------SVEVIES---FAINM- 2864
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVAS 110
G +T + LD EK RY + +VAS
Sbjct: 2865 ETGWITTLKELDHEKRDRYQIKVVAS 2890
>gi|148676976|gb|EDL08923.1| cadherin 12 [Mus musculus]
Length = 570
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 17/93 (18%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
++V + +PVGS I + +RAVD D G N +EY IVP N+ D VT D
Sbjct: 52 LKVPESSPVGSAIGR-IRAVDPDFGKNAEIEYNIVPGDGGNLF-------DIVTDEDT-- 101
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+G + + + LDFE + Y + AS
Sbjct: 102 -------QEGIIKLKKPLDFETKKAYTFKVEAS 127
>gi|16445393|ref|NP_004052.2| cadherin-12 preproprotein [Homo sapiens]
gi|158937438|sp|P55289.2|CAD12_HUMAN RecName: Full=Cadherin-12; AltName: Full=Brain cadherin;
Short=BR-cadherin; AltName: Full=Neural type cadherin 2;
Short=N-cadherin 2; Flags: Precursor
gi|29126956|gb|AAH47608.1| Cadherin 12, type 2 (N-cadherin 2) [Homo sapiens]
gi|119631141|gb|EAX10736.1| cadherin 12, type 2 (N-cadherin 2), isoform CRA_c [Homo sapiens]
gi|189054555|dbj|BAG37328.1| unnamed protein product [Homo sapiens]
gi|190689985|gb|ACE86767.1| cadherin 12, type 2 (N-cadherin 2) protein [synthetic construct]
gi|190691357|gb|ACE87453.1| cadherin 12, type 2 (N-cadherin 2) protein [synthetic construct]
Length = 794
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 17/93 (18%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
++V + +P+GS I + +RAVD D G N +EY IVP N+ D VT D
Sbjct: 276 LKVPESSPIGSAIGR-IRAVDPDFGQNAEIEYNIVPGDGGNLF-------DIVTDEDT-- 325
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+G + + + LDFE + Y + AS
Sbjct: 326 -------QEGVIKLKKPLDFETKKAYTFKVEAS 351
>gi|506406|gb|AAA35623.1| cadherin-12 [Homo sapiens]
Length = 794
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 17/93 (18%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
++V + +P+GS I + +RAVD D G N +EY IVP N+ D VT D
Sbjct: 276 LKVPESSPIGSAIGR-IRAVDPDFGQNAEIEYNIVPGDGGNLF-------DIVTDEDT-- 325
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+G + + + LDFE + Y + AS
Sbjct: 326 -------QEGVIKLKKPLDFETKKAYTFKVEAS 351
>gi|119631139|gb|EAX10734.1| cadherin 12, type 2 (N-cadherin 2), isoform CRA_a [Homo sapiens]
Length = 637
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 17/93 (18%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
++V + +P+GS I + +RAVD D G N +EY IVP N+ D VT D
Sbjct: 276 LKVPESSPIGSAIGR-IRAVDPDFGQNAEIEYNIVPGDGGNL-------FDIVTDEDT-- 325
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+G + + + LDFE + Y + AS
Sbjct: 326 -------QEGVIKLKKPLDFETKKAYTFKVEAS 351
>gi|426385068|ref|XP_004059056.1| PREDICTED: cadherin-12 [Gorilla gorilla gorilla]
Length = 536
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 17/93 (18%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
++V + +P+GS I + +RAVD D G N +EY IVP N+ D VT D
Sbjct: 18 LKVPESSPIGSAIGR-IRAVDPDFGQNAEIEYNIVPGDGGNLF-------DIVTDEDT-- 67
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+G + + + LDFE + Y + AS
Sbjct: 68 -------QEGVIKLKKPLDFETKKAYTFKVEAS 93
>gi|73954381|ref|XP_546371.2| PREDICTED: cadherin-12 isoform 2 [Canis lupus familiaris]
Length = 794
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 17/93 (18%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
++V + +P+GS I + +RAVD D G N +EY IVP N+ D VT D
Sbjct: 276 LKVPESSPIGSAIGR-IRAVDPDFGQNAEIEYNIVPGDGGNLF-------DIVTDEDT-- 325
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+G + + + LDFE + Y + AS
Sbjct: 326 -------QEGVIKLKKPLDFETKKAYTFKVEAS 351
>gi|194223990|ref|XP_001501060.2| PREDICTED: cadherin-12 [Equus caballus]
Length = 794
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 23/96 (23%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
++V + +P+GS I + +RAVD D G N +EY IVP DG +
Sbjct: 276 LKVPESSPIGSAIGR-IRAVDPDFGQNAEIEYNIVPG-------------------DGGN 315
Query: 78 YFSINLP---HQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I+ +G + + + LDFE + Y + AS
Sbjct: 316 LFDISTDEDTQEGVIKLKKPLDFETKKAYTFKVEAS 351
>gi|405778352|ref|NP_001258306.1| protocadherin-15 precursor [Rattus norvegicus]
Length = 1791
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 41/95 (43%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I D D
Sbjct: 161 VNELTPVGTTIFTGFAGDNGATDIDDGPNGQIEYVI------QYNPEDPTSNDT------ 208
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E RY V I A+
Sbjct: 209 ---FEIPLMLTGNVVLRKRLNYEDKTRYYVIIQAN 240
>gi|431917280|gb|ELK16816.1| Cadherin-12 [Pteropus alecto]
Length = 656
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 17/93 (18%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
++V + +P+GS I + +RAVD D G N +EY IVP N+ D VT D
Sbjct: 138 LKVPESSPIGSAIGR-IRAVDPDFGQNAEIEYNIVPGDGGNLF-------DIVTDEDT-- 187
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+G + + + LDFE + Y + AS
Sbjct: 188 -------QEGVIKLKKPLDFETKKAYTFKVEAS 213
>gi|411024213|pdb|4APX|B Chain B, Crystal Structure Of Mouse Cadherin-23 Ec1-2 And
Protocadherin-15 Ec1-2 Form I
gi|411024216|pdb|4AQ8|C Chain C, Crystal Structure Of Mouse Cadherin-23 Ec1-2 And
Protocadherin-15 Ec1-2 Form Ii
gi|411024217|pdb|4AQ8|D Chain D, Crystal Structure Of Mouse Cadherin-23 Ec1-2 And
Protocadherin-15 Ec1-2 Form Ii
gi|411024219|pdb|4AQA|B Chain B, Crystal Structure Of Deafness Associated Mutant Mouse
Cadherin-23 Ec1-2d124g And Protocadherin-15 Ec1-2 Form I
gi|411024221|pdb|4AQE|B Chain B, Crystal Structure Of Deafness Associated Mutant Mouse
Cadherin-23 Ec1-2s70p And Protocadherin-15 Ec1-2 Form I
gi|411024223|pdb|4AXW|B Chain B, Crystal Structure Of Mouse Cadherin-23 Ec1-2 And
Protocadherin-15 Ec1-2, Form I 2.2a
Length = 242
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 41/95 (43%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I D D
Sbjct: 136 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVI------QYNPEDPTSNDT------ 183
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E RY V I A+
Sbjct: 184 ---FEIPLMLTGNVVLRKRLNYEDKTRYYVIIQAN 215
>gi|397464861|ref|XP_003804273.1| PREDICTED: cadherin-12 [Pan paniscus]
Length = 570
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 17/93 (18%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
++V + +P+GS I + +RAVD D G N +EY IVP N+ D VT D
Sbjct: 52 LKVPESSPIGSAIGR-IRAVDPDFGQNAEIEYNIVPGDGGNLF-------DIVTDEDT-- 101
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+G + + + LDFE + Y + AS
Sbjct: 102 -------QEGVIKLKKPLDFETKKAYTFKVEAS 127
>gi|119631140|gb|EAX10735.1| cadherin 12, type 2 (N-cadherin 2), isoform CRA_b [Homo sapiens]
Length = 570
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 17/93 (18%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
++V + +P+GS I + +RAVD D G N +EY IVP N+ D VT D
Sbjct: 52 LKVPESSPIGSAIGR-IRAVDPDFGQNAEIEYNIVPGDGGNLF-------DIVTDEDT-- 101
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+G + + + LDFE + Y + AS
Sbjct: 102 -------QEGVIKLKKPLDFETKKAYTFKVEAS 127
>gi|344248183|gb|EGW04287.1| Cadherin-12 [Cricetulus griseus]
Length = 548
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 17/93 (18%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
++V + +P+GS I + +RAVD D G N +EY IVP N+ D VT D
Sbjct: 30 LKVPESSPIGSAIGR-IRAVDPDFGKNAEIEYNIVPGDGGNLF-------DIVTDEDT-- 79
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+G + + + LDFE + Y + AS
Sbjct: 80 -------QEGIIKLKKPLDFETKKAYTFKVEAS 105
>gi|345798946|ref|XP_003434509.1| PREDICTED: cadherin-12 isoform 1 [Canis lupus familiaris]
Length = 754
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 17/93 (18%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
++V + +P+GS I + +RAVD D G N +EY IVP N+ D VT D
Sbjct: 236 LKVPESSPIGSAIGR-IRAVDPDFGQNAEIEYNIVPGDGGNLF-------DIVTDEDT-- 285
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+G + + + LDFE + Y + AS
Sbjct: 286 -------QEGVIKLKKPLDFETKKAYTFKVEAS 311
>gi|326918941|ref|XP_003205743.1| PREDICTED: protocadherin Fat 4-like [Meleagris gallopavo]
Length = 5008
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 52/113 (46%), Gaps = 28/113 (24%)
Query: 4 TVKVSNRKRTIPVIVRVS------DLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDK 57
TV V + PV ++S + PV S FK ++A D D+GVNG + Y I+ +
Sbjct: 1022 TVSVHDVNDNPPVFDQLSYEITILESEPVNSRFFK-VQASDKDSGVNGEIAYSII---EG 1077
Query: 58 NIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
N G A G+ D GQ+ + LD E +RY++ +VAS
Sbjct: 1078 NAGDAFGIFPD------------------GQLYIKSELDRELQERYVLLVVAS 1112
Score = 34.3 bits (77), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 22/91 (24%)
Query: 19 RVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSY 78
+V + P G+T+ + L A DAD+G N ++ Y I S D ++ D
Sbjct: 3226 KVLENAPSGTTVIR-LNASDADSGPNAVIAYAIQ-SSDSDLFVID--------------- 3268
Query: 79 FSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
P+ G +T LD+E Q Y +TI A
Sbjct: 3269 -----PNTGTITTQGFLDYETKQSYHLTIKA 3294
>gi|403298924|ref|XP_003940250.1| PREDICTED: cadherin-12 [Saimiri boliviensis boliviensis]
Length = 794
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 44/96 (45%), Gaps = 23/96 (23%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
++V + +PVGS I + +RAVD D G N +EY IVP DG +
Sbjct: 276 LKVPESSPVGSAIGR-IRAVDPDFGQNAEIEYNIVPG-------------------DGGN 315
Query: 78 YFSI---NLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I +G + + + LDFE + Y + AS
Sbjct: 316 LFDIVTDEETQEGVIKLKKPLDFETKKAYTFKVEAS 351
>gi|350403194|ref|XP_003486727.1| PREDICTED: protein dachsous-like [Bombus impatiens]
Length = 3229
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 20/96 (20%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P+ VRVS+ +GSTI+ NL A+D D+G+NG + Y +V + D +T
Sbjct: 1283 PITVRVSEKAVIGSTIY-NLTAIDLDSGLNGDLRYGLV----AEFPSRGSFAVDSLT--- 1334
Query: 75 GYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
G +T+ R LD E+ Y++ + AS
Sbjct: 1335 ------------GALTLARPLDREERAEYMLILKAS 1358
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 19/93 (20%)
Query: 17 IVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGY 76
+ +++ VG+ + + A D+DAG NG +EY I Q D
Sbjct: 132 VASIAENATVGTPVLA-VNATDSDAGDNGRIEYSINRRQS-----------------DRE 173
Query: 77 SYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
F I+ P G V VN++LDFE +R+ + IVA
Sbjct: 174 EMFRID-PETGMVYVNKALDFESKERHELVIVA 205
Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 18/94 (19%)
Query: 17 IVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGY 76
+V V + P G+ + + +RA+D D G N V Y I+ KDR + DGY
Sbjct: 1071 VVSVREEQPPGTEVAR-VRALDTDLGENASVTYTIL--------------KDRDS--DGY 1113
Query: 77 SYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ F+I+ P G + LD E+ Y V++ A+
Sbjct: 1114 NVFTID-PITGMIRTKAVLDHEERNVYRVSVKAT 1146
>gi|432112003|gb|ELK35037.1| Cadherin-12 [Myotis davidii]
Length = 727
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 17/93 (18%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
++V + +P+GS I + +RAVD D G N +EY IVP N+ D VT D
Sbjct: 209 LKVPESSPIGSAIGR-IRAVDPDFGQNAEIEYNIVPGDGGNLF-------DIVTDEDT-- 258
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+G + + + LDFE + Y + AS
Sbjct: 259 -------QEGIIKLKKPLDFETKKAYTFKVEAS 284
>gi|405977655|gb|EKC42094.1| Protein dachsous [Crassostrea gigas]
Length = 2755
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 18/95 (18%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P+ V++ P G+++ N+ A D DA NG + Y ++ D N+
Sbjct: 650 PIEATVNENEPKGTSVL-NISAKDDDALENGTISYSLIAEGDVNV--------------- 693
Query: 75 GYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
YF+I+ P G VT LDFE+ RY + ++A
Sbjct: 694 -LKYFAIH-PKTGLVTTLEVLDFEQKNRYALGVIA 726
>gi|395541765|ref|XP_003772809.1| PREDICTED: protocadherin Fat 4 [Sarcophilus harrisii]
Length = 5148
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 43/93 (46%), Gaps = 22/93 (23%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V +S+ PV S FK ++A D D+G NG + Y I + N G A G+ D
Sbjct: 1169 VTLSEAQPVNSLFFK-VQASDQDSGANGEIAYSIA---EGNTGNAFGIFPD--------- 1215
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
GQ+ V LD E RY++ +VAS
Sbjct: 1216 ---------GQLYVKSELDRELQDRYVLLVVAS 1239
>gi|194758613|ref|XP_001961556.1| GF14875 [Drosophila ananassae]
gi|190615253|gb|EDV30777.1| GF14875 [Drosophila ananassae]
Length = 3563
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 18/98 (18%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIV---PSQDKNIGTADGVGKDRVT 71
P+ ++ + TPVGS I N A DAD G NG ++Y ++ P+ +++ A
Sbjct: 1485 PIDLQAKETTPVGS-IIHNFTATDADTGTNGELQYRLLRYFPNVNESQEAA--------- 1534
Query: 72 VVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
S FS++ P G +++ LDFE YL+ + A
Sbjct: 1535 ----TSLFSMD-PLTGSLSLLAPLDFEAVPEYLLIVQA 1567
Score = 34.7 bits (78), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 19/84 (22%)
Query: 26 VGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPH 85
VG+++ + + A D DA NGLVEY I Q K+++ +D P
Sbjct: 298 VGTSVLQ-VYASDTDADENGLVEYAINRRQSD---------KEKMFRID---------PR 338
Query: 86 QGQVTVNRSLDFEKTQRYLVTIVA 109
G + +N+ LDFE + + + +VA
Sbjct: 339 TGAIYINKPLDFETKELHELVVVA 362
>gi|326671188|ref|XP_002663584.2| PREDICTED: protocadherin alpha-6-like [Danio rerio]
Length = 777
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 44/93 (47%), Gaps = 20/93 (21%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEY-FIVPSQDKNIGTADGVGKDRVTVVDGY 76
VRV++ TP GS I K + A D D G NG V Y F Q+KN+
Sbjct: 229 VRVTENTPRGSKIIK-INATDVDEGSNGEVMYLFSSHGQEKNLDA--------------- 272
Query: 77 SYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
F+IN P G++ V ++DFE Y + + A
Sbjct: 273 --FAIN-PQSGEIKVKGNVDFEDKAFYELRVEA 302
>gi|395501475|ref|XP_003755120.1| PREDICTED: protocadherin-15 [Sarcophilus harrisii]
Length = 1782
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 43/95 (45%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I + D D D
Sbjct: 132 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQYNPD------DPTSNDT------ 179
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E RY V + A+
Sbjct: 180 ---FEIPLTLTGTVVLRKRLNYEDKTRYYVIVQAN 211
>gi|449499705|ref|XP_004186240.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 4 [Taeniopygia
guttata]
Length = 5033
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 52/113 (46%), Gaps = 28/113 (24%)
Query: 4 TVKVSNRKRTIPVIVRVS------DLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDK 57
TV V + PV ++S + PV S FK ++A D D+GVNG + Y I+ +
Sbjct: 1029 TVSVHDVNDNPPVFDQLSYEITILESEPVNSRFFK-VQASDKDSGVNGEIAYSII---EG 1084
Query: 58 NIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
N G A G+ D GQ+ + LD E +RY++ +VAS
Sbjct: 1085 NAGDAFGIFPD------------------GQLYIKSELDRELQERYVLLVVAS 1119
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 26/98 (26%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDK--NIGTADGVGKDRVTV 72
P + V + TP+ + +FK +A D D+G N +EY ++P +IGT D
Sbjct: 2100 PKLTYVPENTPIDTVVFK-AQATDPDSGPNSYIEYSLLPPPGNKFSIGTID--------- 2149
Query: 73 VDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
G+V + LD E Y +T+VA+
Sbjct: 2150 --------------GEVRLTGELDREAVANYTLTVVAT 2173
>gi|354491659|ref|XP_003507972.1| PREDICTED: cadherin-12 [Cricetulus griseus]
Length = 796
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 17/93 (18%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
++V + +P+GS I + +RAVD D G N +EY IVP N+ D VT D
Sbjct: 278 LKVPESSPIGSAIGR-IRAVDPDFGKNAEIEYNIVPGDGGNLF-------DIVTDEDT-- 327
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+G + + + LDFE + Y + AS
Sbjct: 328 -------QEGIIKLKKPLDFETKKAYTFKVEAS 353
>gi|189236209|ref|XP_971084.2| PREDICTED: similar to AGAP007924-PA [Tribolium castaneum]
Length = 4974
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 21/95 (22%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P V+VS+ +PVG+ + + L DAD G+NG V Y IV D DG R T+ +
Sbjct: 1202 PYRVQVSEGSPVGTQVIR-LFTSDADEGLNGDVFYSIVQGND------DG----RFTIEE 1250
Query: 75 GYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
GQ+ +++ LD E YL+T+VA
Sbjct: 1251 A----------TGQIILSKILDRETVSNYLLTVVA 1275
Score = 38.1 bits (87), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 51/116 (43%), Gaps = 27/116 (23%)
Query: 1 LTCTVKVSNRKRTIPVIVRVS------DLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPS 54
+T T+ V+ + +PV +S + P+GSTI + A D D G NG++ Y I
Sbjct: 3086 VTVTLVVTGENKYMPVFTALSYQVIVPENEPLGSTIL-TVNASDDDQGPNGMIRYKI--- 3141
Query: 55 QDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
G + + VD YS G VT+ + LD++ Q Y + I A
Sbjct: 3142 --------SGGNERKEFAVDPYS---------GAVTILQPLDYDTIQEYHLNITAE 3180
Score = 34.3 bits (77), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 41/92 (44%), Gaps = 18/92 (19%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V +S+ P G T+ L A D D G NG V Y + P ++ D V V+D +
Sbjct: 580 VSLSENAPPG-TLIAMLTASDHDQGTNGSVAYSLHPVTQQHY--------DNVLVLDSLT 630
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
GQ+T + LD E+ Y + ++A
Sbjct: 631 ---------GQLTTRKKLDREEISHYEIHVIA 653
>gi|157108475|ref|XP_001650242.1| protocadherin [Aedes aegypti]
gi|108884002|gb|EAT48227.1| AAEL000717-PA [Aedes aegypti]
Length = 605
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 19/84 (22%)
Query: 26 VGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPH 85
+G+T+ + + A D DAG NG+VEY I Q KD++ +D P+
Sbjct: 271 IGTTVLQ-VYATDQDAGENGMVEYAINRRQSD---------KDQMFRID---------PN 311
Query: 86 QGQVTVNRSLDFEKTQRYLVTIVA 109
G ++VN+ LDFE + + + +VA
Sbjct: 312 TGLISVNKPLDFETKELHELVVVA 335
>gi|410975521|ref|XP_003994179.1| PREDICTED: cadherin-related family member 1 [Felis catus]
Length = 909
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 46/97 (47%), Gaps = 24/97 (24%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P IV+V + P GS+I K + AVD D G G V YF+ +N+ A DR
Sbjct: 189 PYIVQVPEDIPTGSSIIK-VHAVDKDTGSGGSVTYFL-----QNM-HATKFAMDR----- 236
Query: 75 GYSYFSINLPHQG--QVTVNRSLDFEKTQRYLVTIVA 109
H G ++ +LD+EK Q + VT+VA
Sbjct: 237 ----------HSGVLRLRAGATLDYEKAQAHFVTVVA 263
>gi|340728239|ref|XP_003402435.1| PREDICTED: protein dachsous-like [Bombus terrestris]
Length = 3327
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 19/93 (20%)
Query: 17 IVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGY 76
+ +++ VG+ + + A D+DAG NG +EY I Q D
Sbjct: 230 VASIAENATVGTPVLA-VNATDSDAGDNGRIEYSINRRQS-----------------DRE 271
Query: 77 SYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
F I+ P G V VN++LDFE +R+ + IVA
Sbjct: 272 EMFRID-PETGMVYVNKALDFESKERHELVIVA 303
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 20/96 (20%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P+ VRVS+ +GST++ NL A+D D+G+NG + Y +V + D +T
Sbjct: 1381 PITVRVSEKAVIGSTVY-NLTAIDLDSGLNGDLRYSLV----AEFPSRGSFAVDSLT--- 1432
Query: 75 GYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
G +T+ R LD E+ Y++ + AS
Sbjct: 1433 ------------GALTLARPLDREERAEYMLILKAS 1456
Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 18/94 (19%)
Query: 17 IVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGY 76
+V V + P G+ + + +RA+D D G N V Y I+ KDR + DGY
Sbjct: 1169 VVSVREEQPPGTEVAR-VRALDTDLGENASVTYTIL--------------KDRDS--DGY 1211
Query: 77 SYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ F+I+ P G + LD E+ Y V++ A+
Sbjct: 1212 NVFTID-PITGMIRTKAVLDHEERNVYRVSVKAT 1244
>gi|44890274|gb|AAH66823.1| Pcdhgb7 protein [Mus musculus]
Length = 931
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 19/92 (20%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
VR+ + P G+T+ + L+A+D D G+N Y +G A+ G
Sbjct: 249 VRLPEDLPPGTTVLR-LKAMDQDEGINAEFTYSF-------LGVAN----------KGQH 290
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
FS+N P G + +SLDFE+ +RY + + A
Sbjct: 291 EFSLN-PLTGDIVTLQSLDFEEVERYTIGVEA 321
>gi|357623110|gb|EHJ74394.1| dachsous [Danaus plexippus]
Length = 463
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 19/84 (22%)
Query: 26 VGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPH 85
VG+T+ K + A+D+D G NG++EY I Q D + F IN P
Sbjct: 123 VGTTVLK-VFAIDSDEGENGVIEYSINRRQS-----------------DRDNMFKIN-PD 163
Query: 86 QGQVTVNRSLDFEKTQRYLVTIVA 109
G++ VN+ LDFE + + + +VA
Sbjct: 164 TGEIIVNKLLDFETKELHELVVVA 187
>gi|156371437|ref|XP_001628770.1| predicted protein [Nematostella vectensis]
gi|156215755|gb|EDO36707.1| predicted protein [Nematostella vectensis]
Length = 470
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 22/74 (29%)
Query: 36 AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSL 95
AVD D+G N V Y ++VDG S FSI+ P+ GQ+ V+R+L
Sbjct: 79 AVDMDSGSNSQVTY---------------------SIVDGNSSFSID-PNTGQIIVHRTL 116
Query: 96 DFEKTQRYLVTIVA 109
DFE T+ +++ + A
Sbjct: 117 DFEVTRSFILRVQA 130
>gi|432904778|ref|XP_004077412.1| PREDICTED: cadherin-related family member 1-like [Oryzias latipes]
Length = 887
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 24/100 (24%)
Query: 12 RTIPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVT 71
+ +P ++ V + T GS+I+K + AVD DAG G V +F+ Q
Sbjct: 154 QNLPAMINVVETTESGSSIYK-VEAVDRDAGSGGSVTFFLQMQQ---------------- 196
Query: 72 VVDGYSYFSINLPHQG--QVTVNRSLDFEKTQRYLVTIVA 109
S F+I+ H G ++ LD+EKT+ + VT++A
Sbjct: 197 ----VSLFTIDR-HSGVLRIKSGEMLDYEKTKTHFVTVIA 231
>gi|195576483|ref|XP_002078105.1| GD22718 [Drosophila simulans]
gi|194190114|gb|EDX03690.1| GD22718 [Drosophila simulans]
Length = 3385
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 58/117 (49%), Gaps = 21/117 (17%)
Query: 1 LTCTVKVS----NRKRTIPVIVRVSDLTPVGS----TIFKNLRAVDADAGVNGLVEYFIV 52
L+ TVKV+ + +PV V ++ + + T+ ++AVD D G NG ++Y +
Sbjct: 691 LSSTVKVTILIKDVNDEVPVFVSANETAIMENVAINTVVIAVKAVDNDEGRNGYIDYLMK 750
Query: 53 PSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
+ D+++G +D + FS+N P GQ+ V +LD E YL+ I A
Sbjct: 751 EAGDEDMGQSDPLP------------FSLN-PTDGQLRVVDALDRELRSSYLLNITA 794
>gi|288557284|ref|NP_001165667.1| cadherin-related family member 1 precursor [Xenopus laevis]
gi|82235639|sp|Q6B457.1|CDHR1_XENLA RecName: Full=Cadherin-related family member 1; AltName:
Full=Photoreceptor cadherin; Short=prCAD; AltName:
Full=Protocadherin-21; Flags: Precursor
gi|50980846|gb|AAT91269.1| photoreceptor cadherin [Xenopus laevis]
Length = 867
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 46/97 (47%), Gaps = 24/97 (24%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P IV V + TP GS+IFK + AVD D G G + Y I
Sbjct: 142 PYIVTVPEDTPPGSSIFK-IEAVDKDTGSGGSITYIIQEMHG------------------ 182
Query: 75 GYSYFSINLPHQG--QVTVNRSLDFEKTQRYLVTIVA 109
S F+I+ H G ++ SLDFEK++ + V+++A
Sbjct: 183 --SKFTIDR-HSGVLRIKAGVSLDFEKSRTHFVSVLA 216
>gi|390460196|ref|XP_002745206.2| PREDICTED: protocadherin Fat 1 [Callithrix jacchus]
Length = 4541
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 18/86 (20%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
P G+ + + +RA DAD+G NG V Y + SQ + VV+ F+IN+
Sbjct: 2823 PAGTRVIQ-IRASDADSGTNGQVMYRLDQSQ-------------SMEVVES---FAINV- 2864
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVAS 110
G +T + LD EKT Y + +VAS
Sbjct: 2865 ETGWITTLKELDHEKTDNYQIKVVAS 2890
>gi|793943|gb|AAB48539.1| Br-cadherin [Homo sapiens]
Length = 794
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 17/93 (18%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
++V + +P+GS I + +RAVD D G N +EY IVP N+ D VT D
Sbjct: 276 LKVPESSPIGSAIGR-IRAVDPDFGQNAEIEYNIVPGDGGNLF-------DIVTDEDT-- 325
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+G + + + LDFE + Y + AS
Sbjct: 326 -------QEGVIKLKKPLDFETKKAYTFKVDAS 351
>gi|344274597|ref|XP_003409101.1| PREDICTED: cadherin-23 [Loxodonta africana]
Length = 3663
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 44/97 (45%), Gaps = 25/97 (25%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEY-FIVPSQDKNIGTADGVGKDRVTVV 73
P VR+ + TPVG+ IF + A D D G G V Y F PSQ I +A G+
Sbjct: 344 PYSVRIPENTPVGTPIFI-VNATDPDLGAGGSVLYSFQPPSQFFTIDSARGI-------- 394
Query: 74 DGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
VTV LD+E TQ Y +T+ A+
Sbjct: 395 ---------------VTVIHELDYETTQAYQLTVNAT 416
Score = 34.7 bits (78), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Query: 12 RTIPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFI---VPSQDKNIGTADGV 65
+ +P + V + TP G ++++ + AVD D G+NGLV Y + +P D I ++ GV
Sbjct: 1200 QNLPFMAEVLEGTPAGVSVYQ-VVAVDLDEGLNGLVSYRMQVGMPRMDFLINSSSGV 1255
>gi|431899687|gb|ELK07641.1| Protocadherin Fat 4 [Pteropus alecto]
Length = 1782
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 50/116 (43%), Gaps = 28/116 (24%)
Query: 1 LTCTVKVSNRKRTIPVI------VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPS 54
L TV V + PV V +S+ PV S FK ++A D D+G NG + Y I
Sbjct: 980 LILTVHVHDVNDNPPVFDQLSYEVTLSESEPVNSRFFK-VQAFDKDSGANGEIAYSIA-- 1036
Query: 55 QDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ N G A G+ D GQ+ + LD E RY++ +VAS
Sbjct: 1037 -EGNTGDAFGIFPD------------------GQLYIKSELDRELQDRYVLLVVAS 1073
>gi|53292623|ref|NP_001005402.1| cadherin-related family member 1 precursor [Danio rerio]
gi|82235637|sp|Q6B3P0.1|CDHR1_DANRE RecName: Full=Cadherin-related family member 1; AltName:
Full=Photoreceptor cadherin; Short=prCAD; AltName:
Full=Protocadherin-21; Flags: Precursor
gi|51012435|gb|AAT92537.1| photoreceptor cadherin [Danio rerio]
Length = 857
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 23/100 (23%)
Query: 12 RTIPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVT 71
+ +P IV V + T GS+I+K ++AVD D G G V YF+ S+
Sbjct: 140 QNMPSIVDVPENTTSGSSIYK-VQAVDRDTGSGGSVTYFLQSSEQS-------------- 184
Query: 72 VVDGYSYFSINLPHQG--QVTVNRSLDFEKTQRYLVTIVA 109
F+I+ H G ++ SLD+EK++ + +T+VA
Sbjct: 185 -----PKFAIDH-HSGVLRIKPGESLDYEKSRTHFITVVA 218
>gi|431917279|gb|ELK16815.1| Cadherin-10 [Pteropus alecto]
Length = 810
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 17/95 (17%)
Query: 16 VIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
+ +RV + +PVG+ I +++A+DAD G N VEY I+ DG G D ++
Sbjct: 274 IHLRVLESSPVGTAI-GSVKAIDADTGKNAEVEYRII----------DGDGTDMFDII-- 320
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ +G +TV + LD+E + Y + + A
Sbjct: 321 ----TEKDTQEGIITVKKPLDYESRRLYTLKVEAE 351
>gi|395833102|ref|XP_003789584.1| PREDICTED: cadherin-12 [Otolemur garnettii]
Length = 794
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 23/96 (23%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
++V + +P+GS I + +RAVD D G N +EY IVP DG +
Sbjct: 276 LKVPESSPIGSAIGR-IRAVDPDFGQNAEIEYNIVPG-------------------DGGN 315
Query: 78 YFSI---NLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I +G + + + LDFE + Y + AS
Sbjct: 316 LFDIVTDEETQEGVIKLKKPLDFETKKAYTFKVEAS 351
>gi|47205895|emb|CAF90216.1| unnamed protein product [Tetraodon nigroviridis]
Length = 300
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 48/97 (49%), Gaps = 24/97 (24%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P IV VS+ T GS+I++ ++AVD D G G V YF+ S
Sbjct: 120 PFIVAVSEDTAAGSSIYR-VQAVDRDMGSGGSVSYFLQTSP------------------- 159
Query: 75 GYSYFSINLPHQG--QVTVNRSLDFEKTQRYLVTIVA 109
+S F+I+ H G ++ +LD+E T + VT+VA
Sbjct: 160 -FSKFTID-GHSGILRIKPGETLDYETTPTHFVTVVA 194
>gi|296194864|ref|XP_002745149.1| PREDICTED: cadherin-12 [Callithrix jacchus]
Length = 794
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 23/96 (23%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
++V + +P+GS I + +RAVD D G N +EY IVP DG +
Sbjct: 276 LKVPESSPIGSAIGR-IRAVDPDFGQNAEIEYNIVPG-------------------DGGN 315
Query: 78 YFSI---NLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I +G + + + LDFE + Y + AS
Sbjct: 316 LFDIVTDEETQEGVIKLKKPLDFETKKAYTFKVEAS 351
>gi|327280258|ref|XP_003224869.1| PREDICTED: protocadherin-15-like [Anolis carolinensis]
Length = 2104
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 45/99 (45%), Gaps = 23/99 (23%)
Query: 18 VRVSDLTPVGSTIFK----NLRAVDADAGVNGLVEYFIV--PSQDKNIGTADGVGKDRVT 71
+ V++LTPVG+TIF N A D D G NG +EY I PS + T
Sbjct: 159 IAVNELTPVGTTIFTGFSGNNGATDIDDGPNGQIEYVIQYNPSDPTSNMT---------- 208
Query: 72 VVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + L++E+ RY V + A+
Sbjct: 209 -------FDIPLTLSGAVVLRERLNYEEKTRYFVVVQAN 240
>gi|442623252|ref|NP_001260871.1| starry night, isoform F [Drosophila melanogaster]
gi|440214275|gb|AGB93404.1| starry night, isoform F [Drosophila melanogaster]
Length = 3648
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 42/95 (44%), Gaps = 16/95 (16%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P V + PVG+T+ + A D+D GVN + Y + +G+ D
Sbjct: 901 PYSASVFEDAPVGTTVLV-VSATDSDVGVNAQITYSLNEESINGLGSPDP---------- 949
Query: 75 GYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
FSIN P G + N LD E T YL+T+ A
Sbjct: 950 ----FSIN-PQTGAIVTNAPLDRETTSGYLLTVTA 979
>gi|307194561|gb|EFN76853.1| Cadherin-related tumor suppressor [Harpegnathos saltator]
Length = 3259
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 51/116 (43%), Gaps = 27/116 (23%)
Query: 1 LTCTVKVSNRKRTIPVI------VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPS 54
+T T+ +S R P VRV + PV +TI + AVD D+G NG+V Y I
Sbjct: 1344 VTLTLVISGENRHAPTFAAVSYQVRVPENEPVNTTIL-TVSAVDGDSGPNGMVRYKISAG 1402
Query: 55 QDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
++N +F ++ G VT+ LD++ Q Y + I A+
Sbjct: 1403 NERN------------------EFFVHSI--TGAVTILEPLDYDMVQEYRLNITAT 1438
>gi|270006422|gb|EFA02870.1| fat protein [Tribolium castaneum]
Length = 1781
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 21/95 (22%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P V+VS+ +PVG+ + + L DAD G+NG V Y IV D DG R T+ +
Sbjct: 1202 PYRVQVSEGSPVGTQVIR-LFTSDADEGLNGDVFYSIVQGND------DG----RFTIEE 1250
Query: 75 GYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
GQ+ +++ LD E YL+T+VA
Sbjct: 1251 A----------TGQIILSKILDRETVSNYLLTVVA 1275
>gi|334311403|ref|XP_003339609.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 2-like [Monodelphis
domestica]
Length = 4351
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 53/113 (46%), Gaps = 27/113 (23%)
Query: 4 TVKVSNRKRTIPVIVRV------SDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDK 57
T+++ +R P +++ S + +G+ + + +RA+DAD G NG V+Y + +
Sbjct: 1537 TIQIEDRNLHSPSFIQLHYETTTSTIAALGTELLQ-VRALDADRGFNGQVQYSLQAGNSE 1595
Query: 58 NIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
++ T D PH G +TV + LD + +Y++T+ A
Sbjct: 1596 SLFTID--------------------PHLGIITVAQKLDLMQQDQYMLTVRAE 1628
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 41/98 (41%), Gaps = 23/98 (23%)
Query: 12 RTIPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVT 71
R +P + D T G +F+ + A+D D G NG + Y
Sbjct: 2066 RHLPYYTAIQDGTEPGDVLFQ-VSAIDLDIGANGAITY---------------------A 2103
Query: 72 VVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
+ Y YF I+ P+ G +++ + D+ +Y + ++A
Sbjct: 2104 FAEDYMYFWID-PYLGDISLKKPFDYRALNKYTLRVIA 2140
>gi|6049492|gb|AAF02618.1|AF172329_1 starry night protein [Drosophila melanogaster]
Length = 3579
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 42/95 (44%), Gaps = 16/95 (16%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P V + PVG+T+ + A D+D GVN + Y + +G+ D
Sbjct: 901 PYSASVFEDAPVGTTVLV-VSATDSDVGVNAQITYSLNEESINGLGSPDP---------- 949
Query: 75 GYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
FSIN P G + N LD E T YL+T+ A
Sbjct: 950 ----FSIN-PQTGAIVTNAPLDRETTSGYLLTVTA 979
>gi|354484877|ref|XP_003504612.1| PREDICTED: cadherin-related family member 1 [Cricetulus griseus]
Length = 918
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 24/97 (24%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P +V V + TP GS+IFK + A D D G G V YF+ +N+ +
Sbjct: 203 PYVVLVPENTPAGSSIFK-VHAEDKDTGSGGSVTYFL-----QNLHS------------- 243
Query: 75 GYSYFSINLPHQG--QVTVNRSLDFEKTQRYLVTIVA 109
S F+++ H G ++ +LD+EK++ + +T+VA
Sbjct: 244 --SKFTMDR-HSGVLRLQAGATLDYEKSRAHFITVVA 277
>gi|195582246|ref|XP_002080939.1| GD10750 [Drosophila simulans]
gi|194192948|gb|EDX06524.1| GD10750 [Drosophila simulans]
Length = 3463
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 42/95 (44%), Gaps = 16/95 (16%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P V + PVG+T+ + A D+D GVN + Y + +G+ D
Sbjct: 901 PYSASVFEDAPVGTTVLV-VSATDSDVGVNAQITYSLNEESINGLGSPDP---------- 949
Query: 75 GYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
FSIN P G + N LD E T YL+T+ A
Sbjct: 950 ----FSIN-PQTGAIVTNAPLDRETTSGYLLTVTA 979
>gi|281363131|ref|NP_001163113.1| starry night, isoform B [Drosophila melanogaster]
gi|386767714|ref|NP_001246257.1| starry night, isoform D [Drosophila melanogaster]
gi|272432431|gb|ACZ94388.1| starry night, isoform B [Drosophila melanogaster]
gi|383302401|gb|AFH08011.1| starry night, isoform D [Drosophila melanogaster]
Length = 3574
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 42/95 (44%), Gaps = 16/95 (16%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P V + PVG+T+ + A D+D GVN + Y + +G+ D
Sbjct: 901 PYSASVFEDAPVGTTVLV-VSATDSDVGVNAQITYSLNEESINGLGSPDP---------- 949
Query: 75 GYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
FSIN P G + N LD E T YL+T+ A
Sbjct: 950 ----FSIN-PQTGAIVTNAPLDRETTSGYLLTVTA 979
>gi|221330158|ref|NP_724962.3| starry night, isoform A [Drosophila melanogaster]
gi|320543771|ref|NP_001188903.1| starry night, isoform C [Drosophila melanogaster]
gi|226694203|sp|Q9V5N8.4|STAN_DROME RecName: Full=Protocadherin-like wing polarity protein stan;
AltName: Full=Protein flamingo; AltName: Full=Protein
starry night; Flags: Precursor
gi|220902172|gb|AAF58763.5| starry night, isoform A [Drosophila melanogaster]
gi|318068565|gb|ADV37150.1| starry night, isoform C [Drosophila melanogaster]
Length = 3579
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 42/95 (44%), Gaps = 16/95 (16%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P V + PVG+T+ + A D+D GVN + Y + +G+ D
Sbjct: 901 PYSASVFEDAPVGTTVLV-VSATDSDVGVNAQITYSLNEESINGLGSPDP---------- 949
Query: 75 GYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
FSIN P G + N LD E T YL+T+ A
Sbjct: 950 ----FSIN-PQTGAIVTNAPLDRETTSGYLLTVTA 979
>gi|432863491|ref|XP_004070093.1| PREDICTED: uncharacterized protein LOC101165055 [Oryzias latipes]
Length = 808
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 34/112 (30%), Positives = 49/112 (43%), Gaps = 28/112 (25%)
Query: 5 VKVSNRKRTIPVI------VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKN 58
VK+ N PV + +S+LT V + +F +RA DAD DK
Sbjct: 120 VKILNENDNSPVFENKEQTLFISELTKVNTVVF-TVRATDAD--------------NDKI 164
Query: 59 IGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
I D + YF I+LP+ G+V +++ LDFE VT+ AS
Sbjct: 165 IYAIDQTSPNA-------EYFKIDLPNSGRVILSKPLDFETKPLLTVTVFAS 209
>gi|47551325|ref|NP_999974.1| cadherin-23 precursor [Danio rerio]
gi|46452161|gb|AAS98176.1| cadherin 23 [Danio rerio]
Length = 3366
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 25/97 (25%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEY-FIVPSQDKNIGTADGVGKDRVTVV 73
P +++ + TPVG+++F + A D D GV G V + F PSQ
Sbjct: 142 PYAIQIPENTPVGTSVFM-VNATDPDQGVGGSVLFSFQPPSQ------------------ 182
Query: 74 DGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+FSI+ +G VTV R+LD+E T Y +T+ A+
Sbjct: 183 ----FFSID-GARGIVTVTRALDYETTIAYQLTVNAT 214
>gi|386767716|ref|NP_001246258.1| starry night, isoform E [Drosophila melanogaster]
gi|383302402|gb|AFH08012.1| starry night, isoform E [Drosophila melanogaster]
Length = 3578
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 42/95 (44%), Gaps = 16/95 (16%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P V + PVG+T+ + A D+D GVN + Y + +G+ D
Sbjct: 901 PYSASVFEDAPVGTTVLV-VSATDSDVGVNAQITYSLNEESINGLGSPDP---------- 949
Query: 75 GYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
FSIN P G + N LD E T YL+T+ A
Sbjct: 950 ----FSIN-PQTGAIVTNAPLDRETTSGYLLTVTA 979
>gi|348576470|ref|XP_003474010.1| PREDICTED: protocadherin-15-like isoform 1 [Cavia porcellus]
Length = 1944
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 41/95 (43%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I D D
Sbjct: 161 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVI------QYNPEDPTSNDT------ 208
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E +Y V I A+
Sbjct: 209 ---FEIPLMLTGNVVLRKRLNYEDKTQYFVIIQAN 240
>gi|195333203|ref|XP_002033281.1| GM21230 [Drosophila sechellia]
gi|194125251|gb|EDW47294.1| GM21230 [Drosophila sechellia]
Length = 3575
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 42/95 (44%), Gaps = 16/95 (16%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P V + PVG+T+ + A D+D GVN + Y + +G+ D
Sbjct: 901 PYSASVFEDAPVGTTVLV-VSATDSDVGVNAQITYSLNEESINGLGSPDP---------- 949
Query: 75 GYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
FSIN P G + N LD E T YL+T+ A
Sbjct: 950 ----FSIN-PQTGAIVTNAPLDRETTSGYLLTVTA 979
>gi|5832705|dbj|BAA84069.1| Flamingo [Drosophila melanogaster]
Length = 3575
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 42/95 (44%), Gaps = 16/95 (16%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P V + PVG+T+ + A D+D GVN + Y + +G+ D
Sbjct: 902 PYSASVFEDAPVGTTVLV-VSATDSDVGVNAQITYSLNEESINGLGSPDP---------- 950
Query: 75 GYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
FSIN P G + N LD E T YL+T+ A
Sbjct: 951 ----FSIN-PQTGAIVTNAPLDRETTSGYLLTVTA 980
>gi|348576476|ref|XP_003474013.1| PREDICTED: protocadherin-15-like isoform 4 [Cavia porcellus]
Length = 1939
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 41/95 (43%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I D D
Sbjct: 156 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVI------QYNPEDPTSNDT------ 203
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E +Y V I A+
Sbjct: 204 ---FEIPLMLTGNVVLRKRLNYEDKTQYFVIIQAN 235
>gi|348576474|ref|XP_003474012.1| PREDICTED: protocadherin-15-like isoform 3 [Cavia porcellus]
Length = 1937
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 41/95 (43%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I D D
Sbjct: 156 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVI------QYNPEDPTSNDT------ 203
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E +Y V I A+
Sbjct: 204 ---FEIPLMLTGNVVLRKRLNYEDKTQYFVIIQAN 235
>gi|347543899|gb|AEP02522.1| CDH23, partial [Miniopterus schreibersii]
Length = 3274
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 47/97 (48%), Gaps = 25/97 (25%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEY-FIVPSQDKNIGTADGVGKDRVTVV 73
P VR+ + TPVG+ IF + A D D G G V Y F PSQ
Sbjct: 128 PYSVRIPEDTPVGTPIFI-VNATDPDLGAGGSVLYSFQPPSQ------------------ 168
Query: 74 DGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+F+I+ +G VTV + LD+E TQ Y +T+ A+
Sbjct: 169 ----FFAID-SARGIVTVIQELDYETTQAYQLTVNAT 200
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 40/85 (47%), Gaps = 23/85 (27%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
PVG+ I + A DAD+G ++EY G DG GK F+IN P
Sbjct: 2406 PVGTVILT-VTATDADSGNFAVIEY----------GLVDGEGK-----------FAIN-P 2442
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVA 109
G + V SLD EK Y++T +A
Sbjct: 2443 TTGDIYVLSSLDREKKDHYILTALA 2467
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 21/94 (22%)
Query: 14 IPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVV 73
+P+ V +S+ +PV S+ ++ A DAD+G N L+ + I ++R
Sbjct: 1844 LPMNVTISENSPV-SSFVAHILASDADSGCNALLTFNITAGN-----------RERA--- 1888
Query: 74 DGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTI 107
FSIN G VTVNR LD E+ Y +TI
Sbjct: 1889 -----FSINA-TSGVVTVNRPLDRERIPEYKLTI 1916
>gi|345799035|ref|XP_003434519.1| PREDICTED: cadherin-23 isoform 1 [Canis lupus familiaris]
Length = 3354
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 44/96 (45%), Gaps = 23/96 (23%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P VR+ + TPVG+ IF + A D D G G V Y P
Sbjct: 136 PYSVRIPENTPVGTPIFI-VNATDPDLGAGGSVLYSFQPPS------------------- 175
Query: 75 GYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+F+I+ +G VTV R LD+E TQ Y +T+ A+
Sbjct: 176 --PFFAID-SARGIVTVVRELDYETTQAYQLTVNAT 208
Score = 35.8 bits (81), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 40/85 (47%), Gaps = 23/85 (27%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
PVG+ I + A DAD+G L+EY + DG GK F+IN P
Sbjct: 2416 PVGTVILT-VTASDADSGNFALIEYSL----------GDGEGK-----------FAIN-P 2452
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVA 109
G + V SLD EK Y++T +A
Sbjct: 2453 TTGDIYVLSSLDREKKDHYILTALA 2477
Score = 35.4 bits (80), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 21/94 (22%)
Query: 14 IPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVV 73
+P+ + +S+ +PV S+ ++ A DAD+G N L+ + I ++R
Sbjct: 1854 LPMNITISENSPV-SSFVTHILASDADSGCNALLTFNITAGN-----------RERA--- 1898
Query: 74 DGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTI 107
FSIN G +TVNR LD E+ Y +TI
Sbjct: 1899 -----FSINA-TTGVITVNRPLDRERIPEYKLTI 1926
>gi|348576482|ref|XP_003474016.1| PREDICTED: protocadherin-15-like isoform 7 [Cavia porcellus]
Length = 1868
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 41/95 (43%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I D D
Sbjct: 156 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVI------QYNPEDPTSNDT------ 203
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E +Y V I A+
Sbjct: 204 ---FEIPLMLTGNVVLRKRLNYEDKTQYFVIIQAN 235
>gi|291395174|ref|XP_002714126.1| PREDICTED: cadherin 12, type 2 [Oryctolagus cuniculus]
Length = 794
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 17/93 (18%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
++V + +PVGS + + +RAVD D G N +EY IVP N+ +
Sbjct: 276 LKVPESSPVGSAVGR-IRAVDPDFGQNAEIEYNIVPGDGGNL----------------FD 318
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ +G + + + LDFE + Y + AS
Sbjct: 319 IITDEETQEGVIKLKKPLDFETKKAYTFKVEAS 351
>gi|195483670|ref|XP_002090383.1| GE12832 [Drosophila yakuba]
gi|194176484|gb|EDW90095.1| GE12832 [Drosophila yakuba]
Length = 3570
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 42/95 (44%), Gaps = 16/95 (16%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P V + PVG+T+ + A D+D GVN + Y + +G+ D
Sbjct: 901 PYSASVFEDAPVGTTVLV-VSATDSDVGVNAQITYSLNEESINGLGSPDP---------- 949
Query: 75 GYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
FSIN P G + N LD E T YL+T+ A
Sbjct: 950 ----FSIN-PQTGAIVTNAPLDRETTSGYLLTVTA 979
>gi|348576478|ref|XP_003474014.1| PREDICTED: protocadherin-15-like isoform 5 [Cavia porcellus]
Length = 1934
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 41/95 (43%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I D D
Sbjct: 156 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVI------QYNPEDPTSNDT------ 203
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E +Y V I A+
Sbjct: 204 ---FEIPLMLTGNVVLRKRLNYEDKTQYFVIIQAN 235
>gi|189241585|ref|XP_970293.2| PREDICTED: similar to Cad89D CG14900-PA [Tribolium castaneum]
Length = 1675
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 55/119 (46%), Gaps = 28/119 (23%)
Query: 1 LTCTVKVSNRKRTIPVIV------RVSDLTPVGSTIFKNLRAVDADAG--VNGLVEYFIV 52
L+ TV V + PV V V +LTPVG TIF+ +RA D D N V+Y I+
Sbjct: 119 LSVTVYVEDVNDHAPVFVGAPYQLAVDELTPVGLTIFRGIRASDRDKPNTPNSDVQYAII 178
Query: 53 PSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQR-YLVTIVAS 110
++ GK F+++ Q + + R LD++ R +L+TI AS
Sbjct: 179 SGNER--------GK-----------FALDSSQQAFLILKRPLDYDTGDREFLLTIAAS 218
>gi|326919108|ref|XP_003205825.1| PREDICTED: protocadherin Fat 1-like [Meleagris gallopavo]
Length = 4590
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 18/86 (20%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
P G+ + + ++ D D+G+NG V Y + PSQ+ +D F+IN+
Sbjct: 2824 PAGTRVIQ-VKGTDLDSGLNGQVTYSLDPSQE----------------LDVIESFAINM- 2865
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVAS 110
G +T + LD E +Y +T++AS
Sbjct: 2866 ETGWITTLKELDHEMRDKYKITVIAS 2891
>gi|307184762|gb|EFN71076.1| Protein dachsous [Camponotus floridanus]
Length = 2212
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 26/99 (26%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIV---PSQDKNIGTADGVGKDRVT 71
P+ +RVS+ +GSTI+ NL A D D+G+NG + Y +V PS+
Sbjct: 285 PITIRVSEKAAIGSTIY-NLTASDLDSGLNGDLRYSLVDEFPSK---------------- 327
Query: 72 VVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
YF+++ G VT+ + LD E+ Y + + AS
Sbjct: 328 -----GYFAVD-SLTGAVTLAKQLDREERADYTLILKAS 360
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 18/94 (19%)
Query: 17 IVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGY 76
+V V + P G+ + K +RA+D D G N V Y I+ +D DGY
Sbjct: 73 VVSVREEQPPGTEVAK-VRALDMDLGENASVTYSILKDRDS----------------DGY 115
Query: 77 SYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ F+I+ P G + LD E+ Y V++ A+
Sbjct: 116 NVFTID-PITGMIRTKAVLDHEERNVYRVSVKAT 148
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 36/77 (46%), Gaps = 19/77 (24%)
Query: 34 LRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNR 93
L A DAD G+N + Y IV D N A F+I+ PH G V N
Sbjct: 1093 LSADDADQGLNSRILYHIV---DGNPDNA----------------FTISPPHSGIVRTNI 1133
Query: 94 SLDFEKTQRYLVTIVAS 110
LD E ++Y +TI+A+
Sbjct: 1134 VLDREVREKYRLTIIAT 1150
>gi|344277382|ref|XP_003410481.1| PREDICTED: protocadherin Fat 4 [Loxodonta africana]
Length = 4980
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 43/93 (46%), Gaps = 22/93 (23%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V +S+ PV S FK ++A D D+G NG V Y I + N G A GV D
Sbjct: 1003 VTLSESEPVNSRFFK-VQASDKDSGANGEVAYSIA---EGNAGDAFGVFPD--------- 1049
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
GQ+ + LD E RY++ +VAS
Sbjct: 1050 ---------GQLYIKSELDRELQDRYVLLVVAS 1073
>gi|348524542|ref|XP_003449782.1| PREDICTED: protocadherin-23-like [Oreochromis niloticus]
Length = 3262
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 43/93 (46%), Gaps = 21/93 (22%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
+VS+ + +G+ + + + A D D G NGLV Y I+ K D
Sbjct: 2572 AQVSENSQLGTKLVQ-VSAHDPDLGTNGLVRYDIISGNSKGHLKLD-------------- 2616
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
P G + VN SLD+EK +Y++TI AS
Sbjct: 2617 ------PQSGLLVVNNSLDYEKDSKYILTIRAS 2643
>gi|348508893|ref|XP_003441987.1| PREDICTED: protocadherin-15 [Oreochromis niloticus]
Length = 2302
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 45/97 (46%), Gaps = 19/97 (19%)
Query: 18 VRVSDLTPVGSTIFK----NLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVV 73
V V++LTPVG+TIF N A D D G NG +EY I + TA+
Sbjct: 201 VAVNELTPVGTTIFSGFSGNNGATDIDDGPNGQIEYTI--QYNPRDPTANRT-------- 250
Query: 74 DGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + L++E RYLV I A+
Sbjct: 251 -----FDIPLTLFGSVVLRERLNYEDITRYLVIIQAN 282
>gi|270001266|gb|EEZ97713.1| cadherin-like protein [Tribolium castaneum]
Length = 1840
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 55/119 (46%), Gaps = 28/119 (23%)
Query: 1 LTCTVKVSNRKRTIPVIV------RVSDLTPVGSTIFKNLRAVDADAG--VNGLVEYFIV 52
L+ TV V + PV V V +LTPVG TIF+ +RA D D N V+Y I+
Sbjct: 119 LSVTVYVEDVNDHAPVFVGAPYQLAVDELTPVGLTIFRGIRASDRDKPNTPNSDVQYAII 178
Query: 53 PSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQR-YLVTIVAS 110
++ GK F+++ Q + + R LD++ R +L+TI AS
Sbjct: 179 SGNER--------GK-----------FALDSSQQAFLILKRPLDYDTGDREFLLTIAAS 218
>gi|348576490|ref|XP_003474020.1| PREDICTED: protocadherin-15-like isoform 11 [Cavia porcellus]
Length = 1914
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 41/95 (43%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I D D
Sbjct: 134 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVI------QYNPEDPTSNDT------ 181
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E +Y V I A+
Sbjct: 182 ---FEIPLMLTGNVVLRKRLNYEDKTQYFVIIQAN 213
>gi|348576486|ref|XP_003474018.1| PREDICTED: protocadherin-15-like isoform 9 [Cavia porcellus]
Length = 1917
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 41/95 (43%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I D D
Sbjct: 134 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVI------QYNPEDPTSNDT------ 181
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E +Y V I A+
Sbjct: 182 ---FEIPLMLTGNVVLRKRLNYEDKTQYFVIIQAN 213
>gi|195118208|ref|XP_002003632.1| GI18019 [Drosophila mojavensis]
gi|193914207|gb|EDW13074.1| GI18019 [Drosophila mojavensis]
Length = 2980
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 53/98 (54%), Gaps = 18/98 (18%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIV---PSQDKNIGTADGVGKDRVT 71
P+ ++VS+ PVG+ I N A DAD+G NG ++Y ++ P ++++ +R T
Sbjct: 865 PIELQVSESLPVGA-IIHNFTATDADSGTNGELQYRLLRYSPQLNESL--------ERTT 915
Query: 72 VVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
+ ++ S+ G +++ LD+E Q YL+ + A
Sbjct: 916 PL--FALDSLT----GSLSLQAPLDYESLQEYLLIVQA 947
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 16/93 (17%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V VSD T +G + ++ AVD DAG NG + Y IV + +G G+ R+ G
Sbjct: 998 VYVSDATRIGEMV-THIVAVDRDAGENGRISYDIV--------SGNGEGRFRIKAQSGII 1048
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ LP + +KT R+++TI AS
Sbjct: 1049 ELAKTLPPASE-------QLDKTGRFILTIRAS 1074
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 53/118 (44%), Gaps = 14/118 (11%)
Query: 1 LTCTVKVSNRKRTIPVIVR------VSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPS 54
LT V V + PV R VS+ P+ + I + + A D D G N + Y IV +
Sbjct: 389 LTILVDVQDVNDNPPVFERDEYAVNVSESRPINAQIIQ-VNASDLDTGNNARITYRIVDA 447
Query: 55 QDKNIGT--ADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
N A+ G D D +F I P+ G + + +LD E RY +T++A+
Sbjct: 448 GADNASQSLANAGGPD----ADLAQHFGI-FPNSGWIYLRAALDRESRDRYELTVLAT 500
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 8/95 (8%)
Query: 16 VIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V + V + +G+ +F A D D+G +G V Y I + + T G GK + T G
Sbjct: 292 VRISVPENAELGTPLFA-AHAHDKDSGSSGQVTYSITGNAN---ATQPGRGKAQPT---G 344
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ F+I+ G + ++R LD+E QR+ + + A+
Sbjct: 345 AALFAIDA-RSGHLVLSRHLDYETAQRHSLIVTAT 378
>gi|48976115|ref|NP_001001759.1| cadherin-related family member 1 precursor [Gallus gallus]
gi|82244739|sp|Q8UVJ7.1|CDHR1_CHICK RecName: Full=Cadherin-related family member 1; AltName:
Full=Photoreceptor cadherin; Short=prCAD; AltName:
Full=Protocadherin-21; Flags: Precursor
gi|18182379|gb|AAL65141.1|AF426394_1 photoreceptor cadherin [Gallus gallus]
Length = 865
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 24/97 (24%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P IV+V + +P GS+IFK + AVD D G G + YF+ +NI A+ DR
Sbjct: 141 PYIVQVPENSPSGSSIFK-IEAVDRDTGSGGSITYFL-----QNI-HANKFTIDR----- 188
Query: 75 GYSYFSINLPHQGQVTVNR--SLDFEKTQRYLVTIVA 109
H G + + +LD+EK++ + V +VA
Sbjct: 189 ----------HSGVLRIKSGVTLDYEKSRTHFVVVVA 215
>gi|402872881|ref|XP_003919617.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin gamma-B3 [Papio
anubis]
Length = 767
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 53/114 (46%), Gaps = 22/114 (19%)
Query: 2 TCTVKVSNRKRTIPVI------VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQ 55
T T+ + N +PV V V++ P G++I ++ A D D G NGLV Y+IV S
Sbjct: 440 TITLHILNVNDNVPVFHQASYTVHVAENNPPGASI-AHVSASDPDLGPNGLVYYYIVASD 498
Query: 56 DKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
+ + SY S++ P G V V R+ D E+ + +T+ A
Sbjct: 499 --------------LEPRELSSYVSVS-PQSGVVFVQRAFDHEQLHAFELTLQA 537
>gi|426256142|ref|XP_004021700.1| PREDICTED: cadherin-related family member 1 [Ovis aries]
Length = 892
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 24/97 (24%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P +V+V + TP GS++ + +RAVD D G G V YF+ KN ++
Sbjct: 164 PYVVQVPEDTPSGSSLAR-VRAVDRDTGSAGSVTYFL-----KNPHPSE----------- 206
Query: 75 GYSYFSINLPHQG--QVTVNRSLDFEKTQRYLVTIVA 109
FS++ H G ++ +LDFEK + + +T+VA
Sbjct: 207 ----FSVDR-HSGVLRLQAGATLDFEKARAHFLTVVA 238
>gi|410948495|ref|XP_003980974.1| PREDICTED: protocadherin gamma-B1 [Felis catus]
Length = 763
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 19/92 (20%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V + + P G+++ + + A D D GVN + Y + N T+ +
Sbjct: 247 VNIQENVPWGTSVLQ-VMATDQDQGVNAEITYAFL-----NAPTSTSL------------ 288
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
F++N P+ G +T N +LDFE+T RY++++ A
Sbjct: 289 LFNLN-PNTGDITTNGTLDFEETSRYMLSVEA 319
>gi|301755822|ref|XP_002913760.1| PREDICTED: LOW QUALITY PROTEIN: cadherin-23-like [Ailuropoda
melanoleuca]
Length = 3353
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 44/96 (45%), Gaps = 23/96 (23%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P VR+ + TPVG+ IF + A D D G G V Y P
Sbjct: 136 PYSVRIPENTPVGTPIFI-VNATDPDLGAGGSVLYSFQPPS------------------- 175
Query: 75 GYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+F+I+ +G VTV R LD+E TQ Y +T+ A+
Sbjct: 176 --PFFTID-SARGIVTVVRELDYETTQAYQLTVNAT 208
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 40/85 (47%), Gaps = 23/85 (27%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
PVG+ I + A DAD+G L+EY + DG GK F+IN P
Sbjct: 2415 PVGTVILT-VTATDADSGNFALIEYSL----------GDGEGK-----------FAIN-P 2451
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVA 109
G + V SLD EK Y++T +A
Sbjct: 2452 TTGDIYVLSSLDREKKNHYILTALA 2476
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 21/94 (22%)
Query: 14 IPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVV 73
+P + +S+ +PV S++ ++ A DAD+G N L+ + I ++R
Sbjct: 1854 LPANITISENSPV-SSVIAHILASDADSGCNALLTFNITAGN-----------RERA--- 1898
Query: 74 DGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTI 107
FSIN G +TVNR LD E+ Y +TI
Sbjct: 1899 -----FSINA-TTGVITVNRPLDREQIPEYKLTI 1926
Score = 34.7 bits (78), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Query: 12 RTIPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFI---VPSQDKNIGTADGV 65
+ +P + V + TP G ++++ + AVD D G+NGLV Y + +P D I ++ GV
Sbjct: 891 QNLPFVAEVLEGTPAGVSVYQ-VVAVDLDEGLNGLVSYRMQVGMPRMDFLINSSSGV 946
>gi|11128037|ref|NP_061745.1| protocadherin gamma-B1 isoform 1 precursor [Homo sapiens]
gi|37999833|sp|Q9Y5G3.1|PCDGD_HUMAN RecName: Full=Protocadherin gamma-B1; Short=PCDH-gamma-B1; Flags:
Precursor
gi|5456957|gb|AAD43724.1| protocadherin gamma B1 [Homo sapiens]
gi|119582356|gb|EAW61952.1| hCG1982215, isoform CRA_ae [Homo sapiens]
Length = 927
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 56/111 (50%), Gaps = 26/111 (23%)
Query: 5 VKVSNRKRTIPV----IVRVS--DLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKN 58
++V++ PV + RVS + P G+++ + + A D D G+N + Y + S
Sbjct: 227 IRVTDANDNAPVFSQEVYRVSLQENVPWGTSVLR-VMATDQDEGINAEITYAFLNSP--- 282
Query: 59 IGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
I T S F++N P+ G +T N +LDFE+T RY++++ A
Sbjct: 283 IST---------------SLFNLN-PNTGDITTNGTLDFEETSRYVLSVEA 317
>gi|344243558|gb|EGV99661.1| Protocadherin-21 [Cricetulus griseus]
Length = 820
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 24/97 (24%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P +V V + TP GS+IFK + A D D G G V YF+ +N+ +
Sbjct: 139 PYVVLVPENTPAGSSIFK-VHAEDKDTGSGGSVTYFL-----QNLHS------------- 179
Query: 75 GYSYFSINLPHQG--QVTVNRSLDFEKTQRYLVTIVA 109
S F+++ H G ++ +LD+EK++ + +T+VA
Sbjct: 180 --SKFTMDR-HSGVLRLQAGATLDYEKSRAHFITVVA 213
>gi|347543903|gb|AEP02524.1| CDH23, partial [Hipposideros larvatus]
Length = 3276
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 23/96 (23%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P VR+ + TPVG+ IF + A D D G G V Y P +
Sbjct: 128 PYSVRIPEDTPVGTPIFI-VNATDPDLGAGGSVLYSFQPPSE------------------ 168
Query: 75 GYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+F+I+ +G VTV + LD+E TQ Y +T+ A+
Sbjct: 169 ---FFAID-SARGIVTVIQELDYETTQSYQLTVYAT 200
Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 41/85 (48%), Gaps = 23/85 (27%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
PVG+ I + + A DAD+G ++EY G +G GK FSIN P
Sbjct: 2408 PVGTVILR-VTATDADSGNYAVIEY----------GLGNGEGK-----------FSIN-P 2444
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVA 109
G + V SLD EK Y++T +A
Sbjct: 2445 TTGDIYVLSSLDREKKDHYILTAIA 2469
Score = 35.4 bits (80), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 21/94 (22%)
Query: 14 IPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVV 73
+P+ V VS+ +PV S+ ++ A DAD+G N L+ + I ++R
Sbjct: 1846 LPMNVTVSENSPV-SSFVAHILASDADSGCNALLTFNITAGN-----------RERA--- 1890
Query: 74 DGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTI 107
F+IN G VTVNR LD E+ +Y +TI
Sbjct: 1891 -----FAINA-TTGIVTVNRPLDRERIPQYRLTI 1918
>gi|348576480|ref|XP_003474015.1| PREDICTED: protocadherin-15-like isoform 6 [Cavia porcellus]
Length = 1676
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 41/95 (43%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I D D
Sbjct: 156 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVI------QYNPEDPTSNDT------ 203
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E +Y V I A+
Sbjct: 204 ---FEIPLMLTGNVVLRKRLNYEDKTQYFVIIQAN 235
>gi|449268810|gb|EMC79648.1| Cadherin-10 [Columba livia]
Length = 789
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 17/95 (17%)
Query: 16 VIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
+ +RV + +PVG+ I +++A DAD G N VEY I+ DG G D +V
Sbjct: 274 IHLRVPESSPVGTAI-GSVKATDADTGKNAEVEYRII----------DGDGTDMFDIV-- 320
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ +G +TV + LD+E + Y + + A
Sbjct: 321 ----TQKDTQEGIITVRKPLDYETRRLYTLKVEAE 351
>gi|348576472|ref|XP_003474011.1| PREDICTED: protocadherin-15-like isoform 2 [Cavia porcellus]
Length = 1681
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 41/95 (43%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I D D
Sbjct: 161 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVI------QYNPEDPTSNDT------ 208
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E +Y V I A+
Sbjct: 209 ---FEIPLMLTGNVVLRKRLNYEDKTQYFVIIQAN 240
>gi|345781801|ref|XP_532835.3| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 1 [Canis lupus
familiaris]
Length = 4589
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 43/86 (50%), Gaps = 18/86 (20%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
P GS + + +RA D D+G NG V Y + SQ V V++ F+IN+
Sbjct: 2823 PAGSRVIQ-IRASDLDSGTNGQVMYSLDQSQ-------------SVEVIES---FAINM- 2864
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVAS 110
G ++ + LD EK RY + +VAS
Sbjct: 2865 ETGWISTLKELDHEKRDRYQIQVVAS 2890
>gi|195153499|ref|XP_002017663.1| GL17301 [Drosophila persimilis]
gi|194113459|gb|EDW35502.1| GL17301 [Drosophila persimilis]
Length = 2716
Score = 39.7 bits (91), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 42/95 (44%), Gaps = 16/95 (16%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P V + PVG+T+ + A D+D G+N + Y + +G+ D
Sbjct: 906 PYSASVFEDAPVGTTVLV-VSATDSDVGINAQITYSLNEESINGLGSPDP---------- 954
Query: 75 GYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
FSIN P G + N LD E T YL+T+ A
Sbjct: 955 ----FSIN-PQTGAIVTNAPLDRETTSGYLLTVTA 984
>gi|198460509|ref|XP_001361746.2| GA11265 [Drosophila pseudoobscura pseudoobscura]
gi|198137039|gb|EAL26325.2| GA11265 [Drosophila pseudoobscura pseudoobscura]
Length = 3592
Score = 39.7 bits (91), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 42/95 (44%), Gaps = 16/95 (16%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P V + PVG+T+ + A D+D G+N + Y + +G+ D
Sbjct: 906 PYSASVFEDAPVGTTVLV-VSATDSDVGINAQITYSLNEESINGLGSPDP---------- 954
Query: 75 GYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
FSIN P G + N LD E T YL+T+ A
Sbjct: 955 ----FSIN-PQTGAIVTNAPLDRETTSGYLLTVTA 984
>gi|348576488|ref|XP_003474019.1| PREDICTED: protocadherin-15-like isoform 10 [Cavia porcellus]
Length = 1537
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 41/95 (43%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I D D
Sbjct: 156 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVI------QYNPEDPTSNDT------ 203
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E +Y V I A+
Sbjct: 204 ---FEIPLMLTGNVVLRKRLNYEDKTQYFVIIQAN 235
>gi|195471220|ref|XP_002087903.1| GE14764 [Drosophila yakuba]
gi|194174004|gb|EDW87615.1| GE14764 [Drosophila yakuba]
Length = 5024
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 13/82 (15%)
Query: 28 STIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQG 87
+T+ ++AVD D G NG ++Y + + D+++G D + FS+N P G
Sbjct: 2060 NTVVIAVKAVDNDEGRNGYIDYLMKEASDEDMGQLDPLP------------FSLN-PTDG 2106
Query: 88 QVTVNRSLDFEKTQRYLVTIVA 109
Q+ V +LD E YL+ I A
Sbjct: 2107 QLRVVDALDRELRSSYLLNITA 2128
>gi|395504786|ref|XP_003756728.1| PREDICTED: protocadherin gamma-B7 [Sarcophilus harrisii]
Length = 807
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 54/114 (47%), Gaps = 22/114 (19%)
Query: 2 TCTVKVSNRKRTIPVIVR------VSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQ 55
T T+ +++ P+ ++ + + P GS+I + + A DAD NG V YFI+ S
Sbjct: 438 TLTLHIADINDNAPIFLQPYYVAYIPENNPSGSSITR-VSAYDADLEENGRVSYFIINSD 496
Query: 56 DKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
++ A SY S+N H G + RS D+E+ + + +T+ A
Sbjct: 497 LVSLPLA--------------SYVSVN-SHSGDIFAQRSFDYEQVRTFQLTLQA 535
>gi|347543913|gb|AEP02529.1| CDH23, partial [Taphozous melanopogon]
Length = 3205
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 47/97 (48%), Gaps = 25/97 (25%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEY-FIVPSQDKNIGTADGVGKDRVTVV 73
P VR+ + TPVG+ IF + A D D G G V Y F PSQ
Sbjct: 128 PYSVRIPENTPVGTPIFI-VNATDPDLGAGGSVLYSFQPPSQ------------------ 168
Query: 74 DGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+F+I+ +G +TV + LD+E TQ Y +T+ A+
Sbjct: 169 ----FFAID-SARGIITVIQELDYETTQAYQLTVNAT 200
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 44/90 (48%), Gaps = 23/90 (25%)
Query: 20 VSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYF 79
+S+ PVG+ I + + A DAD+G L+EY + DG GK F
Sbjct: 2401 ISEDVPVGTVILR-VTATDADSGNFALIEYSL----------GDGEGK-----------F 2438
Query: 80 SINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
+IN P G + V SLD EK Y++T +A
Sbjct: 2439 AIN-PTTGDIYVLSSLDREKKDHYILTALA 2467
>gi|326927706|ref|XP_003210032.1| PREDICTED: protocadherin gamma-C5-like, partial [Meleagris
gallopavo]
Length = 794
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 18/92 (19%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V++ + TPVG+ + + L A D D G NG +Y + T++ V +
Sbjct: 249 VQIPENTPVGALLLQ-LNASDPDEGPNGETQYSF------GVHTSEAVRR---------- 291
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
F+++ PH G+V V+ LDFE++ Y + + A
Sbjct: 292 LFALD-PHSGEVRVSGELDFEESPFYEIHVRA 322
>gi|403182344|gb|EAT48765.2| AAEL000246-PA [Aedes aegypti]
Length = 3468
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 44/95 (46%), Gaps = 16/95 (16%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P V + PVG+T+ + A D+D GVN + Y + N + +G+G +
Sbjct: 904 PYTASVFEDAPVGTTVLV-VFATDSDVGVNAQITYLL------NDESVNGLGSNEP---- 952
Query: 75 GYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
FSIN P G + N LD E YL+T+ A
Sbjct: 953 ----FSIN-PQTGAIITNAPLDRETMSGYLLTVTA 982
>gi|157123386|ref|XP_001660147.1| cadherin [Aedes aegypti]
Length = 3478
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 44/95 (46%), Gaps = 16/95 (16%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P V + PVG+T+ + A D+D GVN + Y + N + +G+G +
Sbjct: 904 PYTASVFEDAPVGTTVLV-VFATDSDVGVNAQITYLL------NDESVNGLGSNEP---- 952
Query: 75 GYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
FSIN P G + N LD E YL+T+ A
Sbjct: 953 ----FSIN-PQTGAIITNAPLDRETMSGYLLTVTA 982
>gi|116110522|gb|ABJ74640.1| stan [Drosophila miranda]
Length = 549
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 42/95 (44%), Gaps = 16/95 (16%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P V + PVG+T+ + A D+D G+N + Y + +G+ D
Sbjct: 87 PYSASVFEDAPVGTTVLV-VSATDSDVGINAQITYSLNEESINGLGSPDP---------- 135
Query: 75 GYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
FSIN P G + N LD E T YL+T+ A
Sbjct: 136 ----FSIN-PQTGAIVTNAPLDRETTSGYLLTVTA 165
>gi|345479135|ref|XP_001602595.2| PREDICTED: cadherin-related tumor suppressor-like [Nasonia
vitripennis]
Length = 4967
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 27/113 (23%)
Query: 3 CTVKVSNRKRTIPVIV------RVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQD 56
T+ V+ R P V RV + PV +TI + AVD+D G NG+V Y I
Sbjct: 3091 ATLVVTGENRHAPTFVAVSYQVRVPENEPVNTTIL-TVNAVDSDDGPNGMVRYEI----- 3144
Query: 57 KNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
G +R FSI+ P G VT+ +LD++ Q Y + I A
Sbjct: 3145 -------SAGNER-------HEFSIH-PITGAVTILDALDYDTVQEYRLNITA 3182
>gi|297461475|ref|XP_001249786.2| PREDICTED: protocadherin Fat 4 [Bos taurus]
gi|297484612|ref|XP_002694439.1| PREDICTED: protocadherin Fat 4 [Bos taurus]
gi|296478713|tpg|DAA20828.1| TPA: fat-like [Bos taurus]
Length = 4981
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 22/93 (23%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V +S+ PV S FK ++A D D+G NG + Y I + N G A G+ D
Sbjct: 1003 VTLSESEPVNSRFFK-VQAFDKDSGANGEIAYSIA---EGNTGDAFGIFPD--------- 1049
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
GQ+ + LD E RY++ +VAS
Sbjct: 1050 ---------GQLYIKSELDRELQDRYVLLVVAS 1073
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 46/98 (46%), Gaps = 26/98 (26%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIV-PSQDK-NIGTADGVGKDRVTV 72
P + + + TP+ + +FK +A D D+G N +EY ++ PS +K IGT DG
Sbjct: 2054 PKLTYIPENTPIDTIVFK-AQATDPDSGPNSYIEYTLLNPSGNKFTIGTIDG-------- 2104
Query: 73 VDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+V + LD E+ Y +T+VA+
Sbjct: 2105 ---------------EVRLTGELDREEVSNYTLTVVAT 2127
Score = 34.3 bits (77), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 22/85 (25%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
P G+T+ +L A DAD+G N ++ Y I S D ++ D P
Sbjct: 3208 PSGTTVI-HLNATDADSGTNAVIAYTIQ-SSDSDLFVID--------------------P 3245
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVA 109
+ G VT LDFE Q Y +T+ A
Sbjct: 3246 NTGVVTTQGFLDFETKQSYHLTVKA 3270
>gi|116110500|gb|ABJ74629.1| stan [Drosophila miranda]
gi|116110502|gb|ABJ74630.1| stan [Drosophila miranda]
gi|116110504|gb|ABJ74631.1| stan [Drosophila miranda]
gi|116110506|gb|ABJ74632.1| stan [Drosophila miranda]
gi|116110508|gb|ABJ74633.1| stan [Drosophila miranda]
gi|116110510|gb|ABJ74634.1| stan [Drosophila miranda]
gi|116110512|gb|ABJ74635.1| stan [Drosophila miranda]
gi|116110516|gb|ABJ74637.1| stan [Drosophila miranda]
gi|116110518|gb|ABJ74638.1| stan [Drosophila miranda]
gi|116110524|gb|ABJ74641.1| stan [Drosophila miranda]
gi|116110526|gb|ABJ74642.1| stan [Drosophila miranda]
gi|116110528|gb|ABJ74643.1| stan [Drosophila miranda]
gi|116110530|gb|ABJ74644.1| stan [Drosophila miranda]
gi|116110532|gb|ABJ74645.1| stan [Drosophila miranda]
gi|116110534|gb|ABJ74646.1| stan [Drosophila miranda]
Length = 549
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 42/95 (44%), Gaps = 16/95 (16%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P V + PVG+T+ + A D+D G+N + Y + +G+ D
Sbjct: 87 PYSASVFEDAPVGTTVLV-VSATDSDVGINAQITYSLNEESINGLGSPDP---------- 135
Query: 75 GYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
FSIN P G + N LD E T YL+T+ A
Sbjct: 136 ----FSIN-PQTGAIVTNAPLDRETTSGYLLTVTA 165
>gi|301769907|ref|XP_002920372.1| PREDICTED: protocadherin Fat 4-like [Ailuropoda melanoleuca]
gi|281339428|gb|EFB15012.1| hypothetical protein PANDA_009099 [Ailuropoda melanoleuca]
Length = 4980
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 22/93 (23%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V +S+ PV S FK ++A D D+G NG + Y I + N G A G+ D
Sbjct: 1003 VTLSESEPVNSRFFK-VQAFDKDSGANGEIAYSIA---EGNTGDAFGIFPD--------- 1049
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
GQ+ + LD E RY++ +VAS
Sbjct: 1050 ---------GQLYIKSELDRELQDRYVLLVVAS 1073
>gi|153792706|ref|NP_899044.3| protocadherin Fat 4 precursor [Mus musculus]
gi|341940688|sp|Q2PZL6.2|FAT4_MOUSE RecName: Full=Protocadherin Fat 4; AltName: Full=FAT tumor suppressor
homolog 4; AltName: Full=Fat-like cadherin protein FAT-J;
Flags: Precursor
Length = 4981
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 43/93 (46%), Gaps = 22/93 (23%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V +S+ PV S FK ++A D D+G NG + Y I D N G A G+ D
Sbjct: 1003 VTLSESEPVNSRFFK-VQASDKDSGANGEIAYTIT---DGNNGDAFGIFPD--------- 1049
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
GQ+ + LD E RY++ +VAS
Sbjct: 1050 ---------GQLYIKSELDRELQDRYVLLVVAS 1073
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 26/98 (26%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIV-PSQDK-NIGTADGVGKDRVTV 72
P + + + TP+ + +FK +A D D+G N +EY ++ PS +K +IGT D
Sbjct: 2054 PKLTYIPENTPIDTVVFK-AQATDPDSGPNSYIEYTLLNPSGNKFSIGTID--------- 2103
Query: 73 VDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
G+V + LD E+ Y +T+VA+
Sbjct: 2104 --------------GEVHLTGELDREEVSNYSLTVVAT 2127
Score = 34.7 bits (78), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 40/90 (44%), Gaps = 22/90 (24%)
Query: 20 VSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYF 79
V + P G+T+ +L A DAD+G N ++ Y V S D ++ D
Sbjct: 3205 VMENAPSGTTVI-HLNATDADSGANAVIAY-TVQSSDSDLFVID---------------- 3246
Query: 80 SINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
P+ G +T LDFE Q Y +T+ A
Sbjct: 3247 ----PNMGVITTQGFLDFETKQSYHLTVKA 3272
>gi|82659759|gb|ABB88946.1| Fat4 [Mus musculus]
Length = 4981
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 43/93 (46%), Gaps = 22/93 (23%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V +S+ PV S FK ++A D D+G NG + Y I D N G A G+ D
Sbjct: 1003 VTLSESEPVNSRFFK-VQASDKDSGANGEIAYTIT---DGNNGDAFGIFPD--------- 1049
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
GQ+ + LD E RY++ +VAS
Sbjct: 1050 ---------GQLYIKSELDRELQDRYVLLVVAS 1073
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 26/98 (26%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIV-PSQDK-NIGTADGVGKDRVTV 72
P + + + TP+ + +FK +A D D+G N +EY ++ PS +K +IGT D
Sbjct: 2054 PKLTYIPENTPIDTVVFK-AQATDPDSGPNSYIEYTLLNPSGNKFSIGTID--------- 2103
Query: 73 VDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
G+V + LD E+ Y +T+VA+
Sbjct: 2104 --------------GEVHLTGELDREEVSNYSLTVVAT 2127
Score = 34.7 bits (78), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 40/90 (44%), Gaps = 22/90 (24%)
Query: 20 VSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYF 79
V + P G+T+ +L A DAD+G N ++ Y V S D ++ D
Sbjct: 3205 VMENAPSGTTVI-HLNATDADSGANAVIAY-TVQSSDSDLFVID---------------- 3246
Query: 80 SINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
P+ G +T LDFE Q Y +T+ A
Sbjct: 3247 ----PNMGVITTQGFLDFETKQSYHLTVKA 3272
>gi|410908209|ref|XP_003967583.1| PREDICTED: neural-cadherin-like [Takifugu rubripes]
Length = 2990
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 52/117 (44%), Gaps = 28/117 (23%)
Query: 1 LTCTVKVSNRKRTIPVIVRVSDL-------TPVGSTIFKNLRAVDADAGVNGLVEYFIVP 53
+ CT++V + P S L TPVG++I + + A D D+G+NG + I+P
Sbjct: 1693 IHCTIQVEDENDNAPEFASSSHLLSPLPEDTPVGTSIIQ-VVATDTDSGLNGEILCSILP 1751
Query: 54 SQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
D + +F+++ G VTV R LD E Y + +VA+
Sbjct: 1752 QSDP------------------HGHFAVS--RAGLVTVARPLDREAVAGYELVVVAT 1788
>gi|301621845|ref|XP_002940255.1| PREDICTED: protocadherin Fat 3-like [Xenopus (Silurana) tropicalis]
Length = 1106
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 46/96 (47%), Gaps = 21/96 (21%)
Query: 12 RTIPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVT 71
++ P V V + PVGS I +RA DAD+G NG V Y I D N+ +
Sbjct: 729 KSFPSDVSVKEDLPVGSPILL-IRATDADSGFNGKVLYTI---SDGNMDSC--------- 775
Query: 72 VVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTI 107
F+I++ GQ+ V +D E T RY++ I
Sbjct: 776 -------FNIDM-ETGQLKVMMPMDRETTDRYILNI 803
>gi|116110498|gb|ABJ74628.1| stan [Drosophila pseudoobscura]
Length = 549
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 42/95 (44%), Gaps = 16/95 (16%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P V + PVG+T+ + A D+D G+N + Y + +G+ D
Sbjct: 87 PYSASVFEDAPVGTTVLV-VSATDSDVGINAQITYSLNEESINGLGSPDP---------- 135
Query: 75 GYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
FSIN P G + N LD E T YL+T+ A
Sbjct: 136 ----FSIN-PQTGAIVTNAPLDRETTSGYLLTVTA 165
>gi|116110514|gb|ABJ74636.1| stan [Drosophila miranda]
Length = 549
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 42/95 (44%), Gaps = 16/95 (16%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P V + PVG+T+ + A D+D G+N + Y + +G+ D
Sbjct: 87 PYSASVFEDAPVGTTVLV-VSATDSDVGINAQITYSLNEESINGLGSPDP---------- 135
Query: 75 GYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
FSIN P G + N LD E T YL+T+ A
Sbjct: 136 ----FSIN-PQTGAIVTNAPLDRETTSGYLLTVTA 165
>gi|345324502|ref|XP_003430824.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 3-like
[Ornithorhynchus anatinus]
Length = 4517
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 50/104 (48%), Gaps = 26/104 (25%)
Query: 9 NRKR-----TIPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTAD 63
NR+R + P V V + PVG+ I K ++A DADAG NG V + I + G D
Sbjct: 715 NRQRPQFDKSFPANVAVREDLPVGAGILK-IQASDADAGFNGKVVFTI------SDGNTD 767
Query: 64 GVGKDRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTI 107
G F+I+L GQ+ V LD E+T YL+ I
Sbjct: 768 G-------------RFAIDL-ETGQLRVLMPLDREQTDLYLLNI 797
>gi|410956898|ref|XP_003985073.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 4 [Felis catus]
Length = 4915
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 22/93 (23%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V +S+ PV S FK ++A D D+G NG + Y I + N G A G+ D
Sbjct: 1003 VTLSESEPVNSRFFK-VQAFDKDSGANGEIAYSIA---EGNTGDAFGIFPD--------- 1049
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
GQ+ + LD E RY++ +VAS
Sbjct: 1050 ---------GQLYIKSELDRELQDRYVLLVVAS 1073
Score = 34.3 bits (77), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 22/85 (25%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
P G+T+ +L A DAD+G N ++ Y V S D ++ D P
Sbjct: 3178 PSGTTVI-HLNATDADSGTNAVIAY-TVQSSDSDLFVID--------------------P 3215
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVA 109
+ G +T LDFE Q Y +T+ A
Sbjct: 3216 NTGVITTQGFLDFETKQSYHLTVKA 3240
>gi|440902766|gb|ELR53515.1| Protocadherin Fat 4 [Bos grunniens mutus]
Length = 4963
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 22/93 (23%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V +S+ PV S FK ++A D D+G NG + Y I + N G A G+ D
Sbjct: 985 VTLSESEPVNSRFFK-VQAFDKDSGANGEIAYSIA---EGNTGDAFGIFPD--------- 1031
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
GQ+ + LD E RY++ +VAS
Sbjct: 1032 ---------GQLYIKSELDRELQDRYVLLVVAS 1055
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 46/98 (46%), Gaps = 26/98 (26%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIV-PSQDK-NIGTADGVGKDRVTV 72
P + + + TP+ + +FK +A D D+G N +EY ++ PS +K IGT DG
Sbjct: 2035 PKLTYIPENTPIDTIVFK-AQATDPDSGPNSYIEYTLLNPSGNKFTIGTIDG-------- 2085
Query: 73 VDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+V + LD E+ Y +T+VA+
Sbjct: 2086 ---------------EVRLTGELDREEVSNYTLTVVAT 2108
Score = 34.3 bits (77), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 22/85 (25%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
P G+T+ +L A DAD+G N ++ Y I S D ++ D P
Sbjct: 3191 PSGTTVI-HLNATDADSGTNAVIAYTIQ-SSDSDLFVID--------------------P 3228
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVA 109
+ G VT LDFE Q Y +T+ A
Sbjct: 3229 NTGVVTTQGFLDFETKQSYHLTVKA 3253
>gi|426247077|ref|XP_004017313.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 4 [Ovis aries]
Length = 4968
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 22/93 (23%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V +S+ PV S FK ++A D D+G NG + Y I + N G A G+ D
Sbjct: 990 VTLSESEPVNSRFFK-VQAFDKDSGANGEIAYSIA---EGNTGDAFGIFPD--------- 1036
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
GQ+ + LD E RY++ +VAS
Sbjct: 1037 ---------GQLYIKSELDRELQDRYVLLVVAS 1060
Score = 34.3 bits (77), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 22/85 (25%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
P G+T+ +L A DAD+G N ++ Y I S D ++ D P
Sbjct: 3195 PSGTTVI-HLNATDADSGTNAVIAYTIQ-SSDSDLFVID--------------------P 3232
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVA 109
+ G VT LDFE Q Y +T+ A
Sbjct: 3233 NTGVVTTQGFLDFETKQSYHLTVKA 3257
>gi|403271744|ref|XP_003927769.1| PREDICTED: protocadherin Fat 4 [Saimiri boliviensis boliviensis]
Length = 4981
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 22/93 (23%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V +S+ PV S FK ++A D D+G NG + Y I + N G A G+ D
Sbjct: 1003 VTLSESEPVNSRFFK-VQASDKDSGANGEIAYAIA---EGNTGDAFGIFPD--------- 1049
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
GQ+ + LD E RY++ +VAS
Sbjct: 1050 ---------GQLYIKSELDRELQDRYVLMVVAS 1073
Score = 34.3 bits (77), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 22/85 (25%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
P G+T+ +L A DAD+G N ++ Y V S D ++ D P
Sbjct: 3208 PSGTTVI-HLNATDADSGTNAVIAY-TVQSSDSDLFVID--------------------P 3245
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVA 109
+ G +T LDFE Q Y +T+ A
Sbjct: 3246 NTGVITTQGFLDFETKQSYHLTVKA 3270
>gi|426256282|ref|XP_004021770.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 1 [Ovis aries]
Length = 4588
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 40/86 (46%), Gaps = 18/86 (20%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
P GS + + +RA D D+G NG V Y + SQ VD F+IN+
Sbjct: 2823 PAGSRVIQ-IRASDLDSGSNGQVMYNLDQSQS----------------VDVIESFAINM- 2864
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVAS 110
G +T R LD EK Y + +VAS
Sbjct: 2865 ETGWITTLRELDHEKRDSYQIKVVAS 2890
>gi|66346693|ref|NP_005236.2| protocadherin Fat 1 precursor [Homo sapiens]
gi|334302792|sp|Q14517.2|FAT1_HUMAN RecName: Full=Protocadherin Fat 1; AltName: Full=Cadherin family
member 7; AltName: Full=Cadherin-related tumor suppressor
homolog; AltName: Full=Protein fat homolog; Contains:
RecName: Full=Protocadherin Fat 1, nuclear form; Flags:
Precursor
Length = 4588
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 18/86 (20%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
P GS + + +RA DAD+G NG V Y + SQ V V++ F+IN+
Sbjct: 2823 PGGSRVIQ-IRASDADSGTNGQVMYSLDQSQ-------------SVEVIES---FAINM- 2864
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVAS 110
G +T + LD EK Y + +VAS
Sbjct: 2865 ETGWITTLKELDHEKRDNYQIKVVAS 2890
>gi|345784074|ref|XP_856760.2| PREDICTED: protocadherin Fat 4 isoform 2 [Canis lupus familiaris]
Length = 4980
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 22/93 (23%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V +S+ PV S FK ++A D D+G NG + Y I + N G A G+ D
Sbjct: 1003 VTLSESEPVNSRFFK-VQAFDKDSGANGEIAYSIA---EGNTGDAFGIFPD--------- 1049
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
GQ+ + LD E RY++ +VAS
Sbjct: 1050 ---------GQLYIKSELDRELQDRYVLLVVAS 1073
Score = 34.3 bits (77), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 22/85 (25%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
P G+T+ +L A DAD+G N ++ Y V S D ++ D P
Sbjct: 3208 PSGTTVI-HLNATDADSGTNAVIAY-TVQSSDSDLFVID--------------------P 3245
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVA 109
+ G +T LDFE Q Y +T+ A
Sbjct: 3246 NTGVITTQGFLDFETKQSYHLTVKA 3270
>gi|195388388|ref|XP_002052862.1| GJ19658 [Drosophila virilis]
gi|194149319|gb|EDW65017.1| GJ19658 [Drosophila virilis]
Length = 3639
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 53/98 (54%), Gaps = 18/98 (18%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIV---PSQDKNIGTADGVGKDRVT 71
P+ + VS+ PVG+ I N A DAD+G NG ++Y ++ P ++++ ++++
Sbjct: 1532 PIELEVSESLPVGA-ILHNFTATDADSGTNGELQYRLLRYTPQLNESL--------EQIS 1582
Query: 72 VVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
+ ++ S+ G +++ LDFE Q YL+ + A
Sbjct: 1583 PL--FALDSLT----GSLSLQAPLDFESLQEYLLIVQA 1614
Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 16/93 (17%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V VSD T +G + ++ AVD+DAG NG + Y IV + +G G+ R+ G
Sbjct: 1658 VYVSDATRIGELV-THIVAVDSDAGENGRISYDIV--------SGNGEGRFRIKPQSGII 1708
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ LP + +KT R+++TI AS
Sbjct: 1709 ELAKTLPPASE-------QLDKTGRFMLTIRAS 1734
>gi|426346210|ref|XP_004040777.1| PREDICTED: protocadherin Fat 1 [Gorilla gorilla gorilla]
Length = 4495
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 18/86 (20%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
P GS + + +RA DAD+G NG V Y + SQ V V++ F+IN+
Sbjct: 2823 PGGSRVIQ-IRASDADSGTNGQVMYSLDQSQ-------------SVEVIES---FAINM- 2864
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVAS 110
G +T + LD EK Y + +VAS
Sbjct: 2865 ETGWITTLKELDHEKRDNYQIKVVAS 2890
>gi|127139454|ref|NP_001076038.1| protocadherin gamma-B1 precursor [Pan troglodytes]
gi|62510863|sp|Q5DRB0.1|PCDGD_PANTR RecName: Full=Protocadherin gamma-B1; Short=PCDH-gamma-B1; Flags:
Precursor
Length = 927
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 54/111 (48%), Gaps = 26/111 (23%)
Query: 5 VKVSNRKRTIPVI------VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKN 58
++V++ PV V + + P G+++ + + A D D G+N + Y + S
Sbjct: 227 IRVTDANDNAPVFSQEVYRVSLQENVPWGTSVLR-VMATDQDEGINAEITYAFLNSP--- 282
Query: 59 IGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
I T S F++N P+ G +T N +LDFE+T RY++++ A
Sbjct: 283 IST---------------SLFNLN-PNTGDITTNGTLDFEETSRYVLSVEA 317
>gi|405953973|gb|EKC21529.1| Protocadherin Fat 4 [Crassostrea gigas]
Length = 4768
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 21/84 (25%)
Query: 26 VGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPH 85
+G+T+ + + A D+D+G+NG+V +FI D AD FS++ P
Sbjct: 1991 IGTTLLQ-VTATDSDSGLNGVVRFFITSGDDN----AD---------------FSMD-PS 2029
Query: 86 QGQVTVNRSLDFEKTQRYLVTIVA 109
G + V ++LD+E+ +Y +TI A
Sbjct: 2030 SGVLRVQKNLDYERVNKYTLTIQA 2053
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 21/91 (23%)
Query: 20 VSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYF 79
V + TP+G+TI + AVDAD G+NG V Y +V + G S F
Sbjct: 1671 VPEDTPIGTTIAL-VEAVDADQGLNGEVVYTLVSTW-------------------GQSIF 1710
Query: 80 SINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
++ P G + + +++D+E+ + +TI+AS
Sbjct: 1711 HLD-PQMGTIRLIKNVDYEQNHLFSLTILAS 1740
>gi|297674808|ref|XP_002815402.1| PREDICTED: protocadherin Fat 1 [Pongo abelii]
Length = 4588
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 18/86 (20%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
P GS + + +RA DAD+G NG V Y + SQ V V++ F+IN+
Sbjct: 2823 PGGSRVIQ-IRASDADSGTNGQVMYSLDQSQ-------------SVEVIES---FAINM- 2864
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVAS 110
G +T + LD EK Y + +VAS
Sbjct: 2865 ETGWITTLKELDHEKRDNYQIKVVAS 2890
>gi|1107687|emb|CAA60685.1| homologue of Drosophila Fat protein [Homo sapiens]
Length = 4590
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 18/86 (20%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
P GS + + +RA DAD+G NG V Y + SQ V V++ F+IN+
Sbjct: 2825 PGGSRVIQ-IRASDADSGTNGQVMYSLDQSQ-------------SVEVIES---FAINM- 2866
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVAS 110
G +T + LD EK Y + +VAS
Sbjct: 2867 ETGWITTLKELDHEKRDNYQIKVVAS 2892
>gi|332244501|ref|XP_003271412.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 4-like [Nomascus
leucogenys]
Length = 4981
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 22/93 (23%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V +S+ PV S FK ++A D D+G NG + Y I + N G A G+ D
Sbjct: 1003 VTLSESEPVNSRFFK-VQASDKDSGANGEIAYTIA---EGNTGDAFGIFPD--------- 1049
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
GQ+ + LD E RY++ +VAS
Sbjct: 1050 ---------GQLYIKSELDRELQDRYVLMVVAS 1073
Score = 34.3 bits (77), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 22/85 (25%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
P G+T+ +L A DAD+G N ++ Y V S D ++ D P
Sbjct: 3208 PSGTTVI-HLNATDADSGTNAVIAY-TVQSSDSDLFVID--------------------P 3245
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVA 109
+ G +T LDFE Q Y +T+ A
Sbjct: 3246 NTGVITTQGFLDFETKQSYHLTVKA 3270
>gi|347543891|gb|AEP02518.1| PCDH15, partial [Hipposideros armiger]
Length = 1925
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 41/95 (43%), Gaps = 19/95 (20%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I D D
Sbjct: 149 VNELTPVGTTIFTGFAGDNGATDIDDGPNGQIEYAI------QYNPEDPTSNDT------ 196
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G V + + L++E +Y V I A+
Sbjct: 197 ---FEIPLMLTGDVVLRKRLNYEDKTQYFVIIQAN 228
>gi|224045062|ref|XP_002199117.1| PREDICTED: cadherin-10 [Taeniopygia guttata]
Length = 789
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 17/95 (17%)
Query: 16 VIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
+ +R+ + +PVG+ I +++A DAD G N VEY I+ DG G D +V
Sbjct: 274 IHLRIPESSPVGTAI-GSVKATDADTGKNAEVEYRII----------DGDGTDMFDIV-- 320
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ +G +TV + LD+E + Y + + A
Sbjct: 321 ----TQKDTQEGIITVRKPLDYETRRLYTLKVEAE 351
>gi|167516998|ref|XP_001742840.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163779464|gb|EDQ93078.1| predicted protein [Monosiga brevicollis MX1]
Length = 7042
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 23/94 (24%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P + +S+ T VG+T+ A DADAGVN + + + QD N G
Sbjct: 2209 PASLTLSEATAVGTTL-HTFEATDADAGVNAALTWSL---QDTNNG-------------- 2250
Query: 75 GYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIV 108
FSIN G++ + R+ DFE + +T+V
Sbjct: 2251 ---RFSIN--ENGELKLERAFDFEAQPYHQLTVV 2279
Score = 35.0 bits (79), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 48/112 (42%), Gaps = 26/112 (23%)
Query: 2 TCTVKVSNRKRTIPVIVRVSDLTPVGS----TIFKNLRAVDADAGVNGLVEYFIVPSQDK 57
T +++ N PV +D++ + + T+ + A DAD G NG V Y
Sbjct: 3196 TVVIQILNENENAPVFQSSADISVLENVTTGTVIGQMVATDADEGANGEVRY-------- 3247
Query: 58 NIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
++ G S+ SI+ G +T+ LD+E QR VT+VA
Sbjct: 3248 -------------SLTQGGSFVSID-AITGVLTLRSGLDYETRQRVEVTVVA 3285
>gi|327274092|ref|XP_003221812.1| PREDICTED: protocadherin Fat 4-like [Anolis carolinensis]
Length = 4863
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 43/93 (46%), Gaps = 22/93 (23%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V +S+L PV S F ++ A D D+G NG + Y I+ + N G A G+ D
Sbjct: 1047 VTISELEPVNSRFF-SVHASDKDSGENGEIAYNII---EGNTGDAFGIFPD--------- 1093
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
GQ+ + LD E +RY + + AS
Sbjct: 1094 ---------GQLYIKSELDRELQERYTLVVAAS 1117
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 26/98 (26%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIV-PSQDK-NIGTADGVGKDRVTV 72
P + + + TPV + +FK +A D D+G N +EY ++ PS K +IGT D
Sbjct: 2098 PKLTYIPENTPVDTIVFK-AQATDPDSGPNSYIEYSLLNPSGKKFSIGTID--------- 2147
Query: 73 VDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
G+V + LD E Y +TI+A+
Sbjct: 2148 --------------GEVRLTGELDRETVSNYTLTIIAT 2171
>gi|307197254|gb|EFN78559.1| Protein dachsous [Harpegnathos saltator]
Length = 2617
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 46/96 (47%), Gaps = 20/96 (20%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P+ VRVS+ +GSTI+ NL A D D+G+NG + Y +V A VD
Sbjct: 676 PITVRVSERAAIGSTIY-NLTASDLDSGLNGELRYGLVAEFPSTCSFA----------VD 724
Query: 75 GYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ G +T+ +SLD E+ Y + + AS
Sbjct: 725 SLT---------GALTLAKSLDREERAEYTLILKAS 751
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 50/115 (43%), Gaps = 37/115 (32%)
Query: 14 IPVIVRVSDL---------TPVGSTIFK---------NLRAVDADAGVNGLVEYFIVPSQ 55
+ VIVRVSD+ T +T+ + L A DAD G+N + Y IV
Sbjct: 1462 VKVIVRVSDVNDNPPIFTQTQYSATVLEGNAKGDFVVKLSASDADQGMNSRILYHIV--- 1518
Query: 56 DKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
D N A F+IN P+ G V N LD E ++Y +TI+A+
Sbjct: 1519 DGNPDNA----------------FTINPPYSGIVQTNIVLDREIREKYRLTIIAT 1557
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 12/91 (13%)
Query: 20 VSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYF 79
V + PVG+T+F + RA D D G+ G + Y IV + D D + F
Sbjct: 2003 VGENEPVGTTVF-SARASDLDRGIFGSLNYSIVSAAATGFSDID----------DSWKLF 2051
Query: 80 SINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+++ G VT D+E+ RY T+ A+
Sbjct: 2052 AVD-DKSGIVTARAVFDYEQRNRYAFTLRAT 2081
>gi|355687592|gb|EHH26176.1| hypothetical protein EGK_16078 [Macaca mulatta]
Length = 4981
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 22/93 (23%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V +S+ PV S FK ++A D D+G NG + Y I + N G A G+ D
Sbjct: 1003 VTLSESEPVNSRFFK-VQASDKDSGANGEIAYTIA---EGNTGDAFGIFPD--------- 1049
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
GQ+ + LD E RY++ +VAS
Sbjct: 1050 ---------GQLYIKSELDRELQDRYVLMVVAS 1073
Score = 34.7 bits (78), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 22/85 (25%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
P G+T+ +L A DAD+G N ++ Y V S D ++ D P
Sbjct: 3208 PSGTTVI-HLNATDADSGTNAVIAY-TVQSSDSDLFVVD--------------------P 3245
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVA 109
+ G +T LDFE Q Y +T+ A
Sbjct: 3246 NTGVITTQGFLDFETKQSYHLTVKA 3270
>gi|297293338|ref|XP_002804233.1| PREDICTED: protocadherin Fat 4-like isoform 2 [Macaca mulatta]
Length = 4981
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 22/93 (23%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V +S+ PV S FK ++A D D+G NG + Y I + N G A G+ D
Sbjct: 1003 VTLSESEPVNSRFFK-VQASDKDSGANGEIAYTIA---EGNTGDAFGIFPD--------- 1049
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
GQ+ + LD E RY++ +VAS
Sbjct: 1050 ---------GQLYIKSELDRELQDRYVLMVVAS 1073
Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 22/85 (25%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
P G+T+ +L A DAD+G N ++ Y V S D ++ D P
Sbjct: 3208 PSGTTVI-HLNATDADSGTNAVIAY-TVQSSDSDLFVVD--------------------P 3245
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVA 109
+ G +T LDFE Q Y +T+ A
Sbjct: 3246 NTGVITTQGFLDFETKQSYHLTVKA 3270
>gi|426345436|ref|XP_004040420.1| PREDICTED: protocadherin Fat 4 [Gorilla gorilla gorilla]
Length = 4981
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 22/93 (23%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V +S+ PV S FK ++A D D+G NG + Y I + N G A G+ D
Sbjct: 1003 VTLSESEPVNSRFFK-VQASDKDSGANGEIAYTIA---EGNTGDAFGIFPD--------- 1049
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
GQ+ + LD E RY++ +VAS
Sbjct: 1050 ---------GQLYIKSELDRELQDRYVLMVVAS 1073
Score = 34.3 bits (77), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 22/85 (25%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
P G+T+ +L A DAD+G N ++ Y V S D ++ D P
Sbjct: 3208 PSGTTVI-HLNATDADSGTNAVIAY-TVQSSDSDLFVID--------------------P 3245
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVA 109
+ G +T LDFE Q Y +T+ A
Sbjct: 3246 NTGVITTQGFLDFETKQSYHLTVKA 3270
>gi|410220660|gb|JAA07549.1| FAT tumor suppressor homolog 4 [Pan troglodytes]
gi|410307816|gb|JAA32508.1| FAT tumor suppressor homolog 4 [Pan troglodytes]
Length = 4983
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 22/93 (23%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V +S+ PV S FK ++A D D+G NG + Y I + N G A G+ D
Sbjct: 1003 VTLSESEPVNSRFFK-VQASDKDSGANGEIAYTIA---EGNTGDAFGIFPD--------- 1049
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
GQ+ + LD E RY++ +VAS
Sbjct: 1050 ---------GQLYIKSELDRELQDRYVLMVVAS 1073
Score = 34.3 bits (77), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 22/85 (25%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
P G+T+ +L A DAD+G N ++ Y V S D ++ D P
Sbjct: 3210 PSGTTVI-HLNATDADSGTNAVIAY-TVQSSDSDLFVID--------------------P 3247
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVA 109
+ G +T LDFE Q Y +T+ A
Sbjct: 3248 NTGVITTQGFLDFETKQSYHLTVKA 3272
>gi|165932370|ref|NP_078858.4| protocadherin Fat 4 precursor [Homo sapiens]
gi|172046149|sp|Q6V0I7.2|FAT4_HUMAN RecName: Full=Protocadherin Fat 4; Short=hFat4; AltName:
Full=Cadherin family member 14; AltName: Full=FAT tumor
suppressor homolog 4; AltName: Full=Fat-like cadherin
protein FAT-J; Flags: Precursor
Length = 4981
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 22/93 (23%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V +S+ PV S FK ++A D D+G NG + Y I + N G A G+ D
Sbjct: 1003 VTLSESEPVNSRFFK-VQASDKDSGANGEIAYTIA---EGNTGDAFGIFPD--------- 1049
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
GQ+ + LD E RY++ +VAS
Sbjct: 1050 ---------GQLYIKSELDRELQDRYVLMVVAS 1073
Score = 34.3 bits (77), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 22/85 (25%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
P G+T+ +L A DAD+G N ++ Y V S D ++ D P
Sbjct: 3208 PSGTTVI-HLNATDADSGTNAVIAY-TVQSSDSDLFVID--------------------P 3245
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVA 109
+ G +T LDFE Q Y +T+ A
Sbjct: 3246 NTGVITTQGFLDFETKQSYHLTVKA 3270
>gi|119625020|gb|EAX04615.1| FAT tumor suppressor homolog 1 (Drosophila), isoform CRA_b [Homo
sapiens]
Length = 3841
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 18/86 (20%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
P GS + + +RA DAD+G NG V Y + SQ V V++ F+IN+
Sbjct: 2826 PGGSRVIQ-IRASDADSGTNGQVMYSLDQSQ-------------SVEVIES---FAINM- 2867
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVAS 110
G +T + LD EK Y + +VAS
Sbjct: 2868 ETGWITTLKELDHEKRDNYQIKVVAS 2893
>gi|402870407|ref|XP_003899216.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 4 [Papio anubis]
Length = 4928
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 22/93 (23%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V +S+ PV S FK ++A D D+G NG + Y I + N G A G+ D
Sbjct: 1003 VTLSESEPVNSRFFK-VQASDKDSGANGEIAYTIA---EGNTGDAFGIFPD--------- 1049
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
GQ+ + LD E RY++ +VAS
Sbjct: 1050 ---------GQLYIKSELDRELQDRYVLMVVAS 1073
Score = 34.3 bits (77), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 22/85 (25%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
P G+T+ +L A DAD+G N ++ Y V S D ++ D P
Sbjct: 3208 PSGTTVI-HLNATDADSGTNAVIAY-TVQSSDSDLFVID--------------------P 3245
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVA 109
+ G +T LDFE Q Y +T+ A
Sbjct: 3246 NTGVITTQGFLDFETKQSYHLTVKA 3270
>gi|332820147|ref|XP_526682.3| PREDICTED: protocadherin Fat 4 isoform 2 [Pan troglodytes]
Length = 4981
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 22/93 (23%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V +S+ PV S FK ++A D D+G NG + Y I + N G A G+ D
Sbjct: 1003 VTLSESEPVNSRFFK-VQASDKDSGANGEIAYTIA---EGNTGDAFGIFPD--------- 1049
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
GQ+ + LD E RY++ +VAS
Sbjct: 1050 ---------GQLYIKSELDRELQDRYVLMVVAS 1073
Score = 34.3 bits (77), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 22/85 (25%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
P G+T+ +L A DAD+G N ++ Y V S D ++ D P
Sbjct: 3208 PSGTTVI-HLNATDADSGTNAVIAY-TVQSSDSDLFVID--------------------P 3245
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVA 109
+ G +T LDFE Q Y +T+ A
Sbjct: 3246 NTGVITTQGFLDFETKQSYHLTVKA 3270
>gi|297674308|ref|XP_002815174.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 4 [Pongo abelii]
Length = 5022
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 22/93 (23%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V +S+ PV S FK ++A D D+G NG + Y I + N G A G+ D
Sbjct: 1003 VTLSESEPVNSRFFK-VQASDKDSGANGEIAYTIA---EGNTGDAFGIFPD--------- 1049
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
GQ+ + LD E RY++ +VAS
Sbjct: 1050 ---------GQLYIKSELDRELQDRYVLMVVAS 1073
>gi|229442261|gb|AAI72773.1| FAT tumor suppressor 1 precursor [synthetic construct]
Length = 1338
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 18/86 (20%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
P GS + + +RA DAD+G NG V Y + SQ V V++ F+IN+
Sbjct: 747 PGGSRVIQ-IRASDADSGTNGQVMYSLDQSQ-------------SVEVIES---FAINM- 788
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVAS 110
G +T + LD EK Y + +VAS
Sbjct: 789 ETGWITTLKELDHEKRDNYQIKVVAS 814
>gi|119625608|gb|EAX05203.1| FAT tumor suppressor homolog 4 (Drosophila) [Homo sapiens]
Length = 4929
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 22/93 (23%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V +S+ PV S FK ++A D D+G NG + Y I + N G A G+ D
Sbjct: 1003 VTLSESEPVNSRFFK-VQASDKDSGANGEIAYTIA---EGNTGDAFGIFPD--------- 1049
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
GQ+ + LD E RY++ +VAS
Sbjct: 1050 ---------GQLYIKSELDRELQDRYVLMVVAS 1073
Score = 34.3 bits (77), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 22/85 (25%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
P G+T+ +L A DAD+G N ++ Y V S D ++ D P
Sbjct: 3157 PSGTTVI-HLNATDADSGTNAVIAY-TVQSSDSDLFVID--------------------P 3194
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVA 109
+ G +T LDFE Q Y +T+ A
Sbjct: 3195 NTGVITTQGFLDFETKQSYHLTVKA 3219
>gi|410349159|gb|JAA41183.1| FAT tumor suppressor homolog 1 [Pan troglodytes]
Length = 4588
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 18/86 (20%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
P GS + + +RA DAD+G NG V Y + SQ V V++ F+IN+
Sbjct: 2823 PGGSRVIQ-IRASDADSGTNGQVMYSLDQSQ-------------SVEVIES---FAINM- 2864
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVAS 110
G +T + LD EK Y + +VAS
Sbjct: 2865 ETGWITTLKELDHEKRDNYQIKVVAS 2890
>gi|410304872|gb|JAA31036.1| FAT tumor suppressor homolog 1 [Pan troglodytes]
Length = 4588
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 18/86 (20%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
P GS + + +RA DAD+G NG V Y + SQ V V++ F+IN+
Sbjct: 2823 PGGSRVIQ-IRASDADSGTNGQVMYSLDQSQ-------------SVEVIES---FAINM- 2864
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVAS 110
G +T + LD EK Y + +VAS
Sbjct: 2865 ETGWITTLKELDHEKRDNYQIKVVAS 2890
>gi|410225470|gb|JAA09954.1| FAT tumor suppressor homolog 1 [Pan troglodytes]
gi|410225472|gb|JAA09955.1| FAT tumor suppressor homolog 1 [Pan troglodytes]
Length = 4588
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 18/86 (20%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
P GS + + +RA DAD+G NG V Y + SQ V V++ F+IN+
Sbjct: 2823 PGGSRVIQ-IRASDADSGTNGQVMYSLDQSQ-------------SVEVIES---FAINM- 2864
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVAS 110
G +T + LD EK Y + +VAS
Sbjct: 2865 ETGWITTLKELDHEKRDNYQIKVVAS 2890
>gi|397506036|ref|XP_003823543.1| PREDICTED: protocadherin Fat 1 [Pan paniscus]
Length = 4588
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 18/86 (20%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
P GS + + +RA DAD+G NG V Y + SQ V V++ F+IN+
Sbjct: 2823 PGGSRVIQ-IRASDADSGTNGQVMYSLDQSQ-------------SVEVIES---FAINM- 2864
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVAS 110
G +T + LD EK Y + +VAS
Sbjct: 2865 ETGWITTLKELDHEKRDNYQIKVVAS 2890
>gi|397490949|ref|XP_003816443.1| PREDICTED: protocadherin Fat 4 [Pan paniscus]
Length = 4981
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 22/93 (23%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V +S+ PV S FK ++A D D+G NG + Y I + N G A G+ D
Sbjct: 1003 VTLSESEPVNSRFFK-VQASDKDSGANGEIAYTIA---EGNTGDAFGIFPD--------- 1049
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
GQ+ + LD E RY++ +VAS
Sbjct: 1050 ---------GQLYIKSELDRELQDRYVLMVVAS 1073
Score = 34.3 bits (77), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 22/85 (25%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
P G+T+ +L A DAD+G N ++ Y V S D ++ D P
Sbjct: 3208 PSGTTVI-HLNATDADSGTNAVIAY-TVQSSDSDLFVID--------------------P 3245
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVA 109
+ G +T LDFE Q Y +T+ A
Sbjct: 3246 NTGVITTQGFLDFETKQSYHLTVKA 3270
>gi|410267946|gb|JAA21939.1| FAT tumor suppressor homolog 1 [Pan troglodytes]
Length = 4588
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 18/86 (20%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
P GS + + +RA DAD+G NG V Y + SQ V V++ F+IN+
Sbjct: 2823 PGGSRVIQ-IRASDADSGTNGQVMYSLDQSQ-------------SVEVIES---FAINM- 2864
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVAS 110
G +T + LD EK Y + +VAS
Sbjct: 2865 ETGWITTLKELDHEKRDNYQIKVVAS 2890
>gi|296195619|ref|XP_002745420.1| PREDICTED: protocadherin Fat 4 [Callithrix jacchus]
Length = 4981
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 22/93 (23%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V +S+ PV S FK ++A D D+G NG + Y I + N G A G+ D
Sbjct: 1003 VTLSESEPVNSRFFK-VQASDKDSGANGEIAYTIA---EGNTGDAFGIFPD--------- 1049
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
GQ+ + LD E RY++ +VAS
Sbjct: 1050 ---------GQLYIKSELDRELQDRYVLMVVAS 1073
Score = 34.3 bits (77), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 22/85 (25%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
P G+T+ +L A DAD+G N ++ Y V S D ++ D P
Sbjct: 3208 PSGTTVI-HLNATDADSGTNAVIAY-TVQSSDSDLFVID--------------------P 3245
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVA 109
+ G +T LDFE Q Y +T+ A
Sbjct: 3246 NTGVITTQGFLDFETKQSYHLTVKA 3270
>gi|355749557|gb|EHH53956.1| hypothetical protein EGM_14676 [Macaca fascicularis]
Length = 4981
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 22/93 (23%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V +S+ PV S FK ++A D D+G NG + Y I + N G A G+ D
Sbjct: 1003 VTLSESEPVNSRFFK-VQASDKDSGANGEIAYTIA---EGNTGDAFGIFPD--------- 1049
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
GQ+ + LD E RY++ +VAS
Sbjct: 1050 ---------GQLYIKSELDRELQDRYVLMVVAS 1073
Score = 34.3 bits (77), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 22/85 (25%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
P G+T+ +L A DAD+G N ++ Y V S D ++ D P
Sbjct: 3208 PSGTTVI-HLNATDADSGTNAVIAY-TVQSSDSDLFVID--------------------P 3245
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVA 109
+ G +T LDFE Q Y +T+ A
Sbjct: 3246 NTGVITTQGFLDFETKQSYHLTVKA 3270
>gi|351701751|gb|EHB04670.1| Protocadherin Fat 4 [Heterocephalus glaber]
Length = 4953
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 22/93 (23%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V +S+ PV S FK ++A D D+G NG + Y I + N G A G+ D
Sbjct: 1002 VTLSESEPVNSRFFK-VQASDEDSGANGEIAYTIA---EGNAGDAFGIFPD--------- 1048
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
GQ+ + LD E RY++ +VAS
Sbjct: 1049 ---------GQLYIKSELDRELQDRYVLVVVAS 1072
>gi|332820729|ref|XP_003310638.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 1 [Pan troglodytes]
Length = 4588
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 18/86 (20%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
P GS + + +RA DAD+G NG V Y + SQ V V++ F+IN+
Sbjct: 2823 PGGSRVIQ-IRASDADSGTNGQVMYSLDQSQ-------------SVEVIES---FAINM- 2864
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVAS 110
G +T + LD EK Y + +VAS
Sbjct: 2865 ETGWITTLKELDHEKRDNYQIKVVAS 2890
>gi|332228105|ref|XP_003263231.1| PREDICTED: cadherin-10 [Nomascus leucogenys]
Length = 788
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 17/95 (17%)
Query: 16 VIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
+ +RV + +PVG+ I +++A DAD G N VEY I+ DG G D +V
Sbjct: 274 IHLRVLESSPVGTAI-GSVKATDADTGKNAEVEYRII----------DGDGTDMFDIV-- 320
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ +G +TV + LD+E + Y + + A
Sbjct: 321 ----TEKDTQEGIITVKKPLDYESRRLYTLKVEAE 351
>gi|297293336|ref|XP_002804232.1| PREDICTED: protocadherin Fat 4-like isoform 1 [Macaca mulatta]
Length = 4981
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 22/93 (23%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V +S+ PV S FK ++A D D+G NG + Y I + N G A G+ D
Sbjct: 1003 VTLSESEPVNSRFFK-VQASDKDSGANGEIAYTIA---EGNTGDAFGIFPD--------- 1049
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
GQ+ + LD E RY++ +VAS
Sbjct: 1050 ---------GQLYIKSELDRELQDRYVLMVVAS 1073
Score = 34.7 bits (78), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 22/85 (25%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
P G+T+ +L A DAD+G N ++ Y V S D ++ D P
Sbjct: 3208 PSGTTVI-HLNATDADSGTNAVIAY-TVQSSDSDLFVVD--------------------P 3245
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVA 109
+ G +T LDFE Q Y +T+ A
Sbjct: 3246 NTGVITTQGFLDFETKQSYHLTVKA 3270
>gi|116110496|gb|ABJ74627.1| stan [Drosophila affinis]
Length = 549
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 42/95 (44%), Gaps = 16/95 (16%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P V + PVG+T+ + A D+D G+N + Y + +G+ D
Sbjct: 87 PYSASVFEDAPVGTTVLV-VSATDSDVGINAQITYSLNEESINGLGSPDP---------- 135
Query: 75 GYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
FSIN P G + N LD E T YL+T+ A
Sbjct: 136 ----FSIN-PQTGAIITNAPLDRETTSGYLLTVTA 165
>gi|14270490|ref|NP_115266.1| protocadherin gamma-B1 isoform 2 precursor [Homo sapiens]
gi|5457082|gb|AAD43777.1|AF152517_1 protocadherin gamma B1 short form protein [Homo sapiens]
gi|74353521|gb|AAI03927.1| Protocadherin gamma subfamily B, 1 [Homo sapiens]
gi|74355149|gb|AAI03928.1| Protocadherin gamma subfamily B, 1 [Homo sapiens]
gi|119582359|gb|EAW61955.1| hCG1982215, isoform CRA_ah [Homo sapiens]
Length = 810
Score = 39.3 bits (90), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 54/111 (48%), Gaps = 26/111 (23%)
Query: 5 VKVSNRKRTIPVI------VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKN 58
++V++ PV V + + P G+++ + + A D D G+N + Y + S
Sbjct: 227 IRVTDANDNAPVFSQEVYRVSLQENVPWGTSVLR-VMATDQDEGINAEITYAFLNSP--- 282
Query: 59 IGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
I T S F++N P+ G +T N +LDFE+T RY++++ A
Sbjct: 283 IST---------------SLFNLN-PNTGDITTNGTLDFEETSRYVLSVEA 317
>gi|47217686|emb|CAG13317.1| unnamed protein product [Tetraodon nigroviridis]
Length = 686
Score = 39.3 bits (90), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 24/97 (24%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P IV VS+ T GS+I++ ++AVD D G G V YF+ S
Sbjct: 120 PFIVAVSEDTAAGSSIYR-VQAVDRDMGSGGSVSYFLQTSP------------------- 159
Query: 75 GYSYFSINLPHQG--QVTVNRSLDFEKTQRYLVTIVA 109
+S F+I+ H G ++ + +LD+E T + VT+VA
Sbjct: 160 -FSKFTID-GHSGILRIKPSETLDYETTPTHFVTVVA 194
>gi|47551319|ref|NP_999838.1| cadherin-10 precursor [Gallus gallus]
gi|3023428|sp|P79995.1|CAD10_CHICK RecName: Full=Cadherin-10; Flags: Precursor
gi|1841296|dbj|BAA19130.1| cadherin-10 [Gallus gallus]
Length = 789
Score = 39.3 bits (90), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 17/95 (17%)
Query: 16 VIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
+ +R+ + +PVG+ I +++A DAD G N VEY I+ DG G D +V
Sbjct: 274 IHLRIPESSPVGTPI-GSIKATDADTGKNAEVEYRII----------DGDGTDMFDIV-- 320
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ +G +TV + LD+E + Y + + A
Sbjct: 321 ----TQRDTQEGIITVRKPLDYETRRLYTLKVEAE 351
>gi|5514625|gb|AAD44017.1|AF039747_1 cadherin-10 [Homo sapiens]
Length = 788
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 17/95 (17%)
Query: 16 VIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
+ +RV + +PVG+ I +++A DAD G N VEY I+ DG G D +V
Sbjct: 274 IHLRVLESSPVGTAI-GSVKATDADTGKNAEVEYRII----------DGDGTDMFDIV-- 320
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ +G +TV + LD+E + Y + + A
Sbjct: 321 ----TEKDTQEGIITVKKPLDYESRRLYTLKVEAE 351
>gi|348582920|ref|XP_003477224.1| PREDICTED: protocadherin gamma-A5-like [Cavia porcellus]
Length = 814
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 19/92 (20%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V V + PVG+ + L A DAD G+NG V YF +D ++
Sbjct: 249 VSVPENIPVGTRLL-TLTASDADEGINGKVTYFFRNEED---------------IISKTF 292
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
NL G+++ +SLD+E+++ YL+ +VA
Sbjct: 293 QLDSNL---GEISTMQSLDYEESRFYLMEVVA 321
>gi|74355151|gb|AAI03929.1| Protocadherin gamma subfamily B, 1 [Homo sapiens]
Length = 810
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 54/111 (48%), Gaps = 26/111 (23%)
Query: 5 VKVSNRKRTIPVI------VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKN 58
++V++ PV V + + P G+++ + + A D D G+N + Y + S
Sbjct: 227 IRVTDANDNAPVFSQEVYRVSLQENVPWGTSVLR-VMATDQDEGINAEITYAFLNSP--- 282
Query: 59 IGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
I T S F++N P+ G +T N +LDFE+T RY++++ A
Sbjct: 283 IST---------------SLFNLN-PNTGDITTNGTLDFEETSRYVLSVEA 317
>gi|119625021|gb|EAX04616.1| FAT tumor suppressor homolog 1 (Drosophila), isoform CRA_c [Homo
sapiens]
Length = 2228
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 18/86 (20%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
P GS + + +RA DAD+G NG V Y + SQ V V++ F+IN+
Sbjct: 1213 PGGSRVIQ-IRASDADSGTNGQVMYSLDQSQ-------------SVEVIES---FAINM- 1254
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVAS 110
G +T + LD EK Y + +VAS
Sbjct: 1255 ETGWITTLKELDHEKRDNYQIKVVAS 1280
>gi|16306530|ref|NP_006718.2| cadherin-10 preproprotein [Homo sapiens]
gi|114600883|ref|XP_001136070.1| PREDICTED: cadherin-10 isoform 2 [Pan troglodytes]
gi|426385060|ref|XP_004059054.1| PREDICTED: cadherin-10 [Gorilla gorilla gorilla]
gi|116241276|sp|Q9Y6N8.2|CAD10_HUMAN RecName: Full=Cadherin-10; AltName: Full=T2-cadherin; Flags:
Precursor
gi|6483303|dbj|BAA87417.1| cadherin-10 [Homo sapiens]
gi|119631147|gb|EAX10742.1| cadherin 10, type 2 (T2-cadherin) [Homo sapiens]
gi|157169618|gb|AAI52829.1| Cadherin 10, type 2 (T2-cadherin) [synthetic construct]
gi|162319316|gb|AAI56819.1| Cadherin 10, type 2 (T2-cadherin) [synthetic construct]
Length = 788
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 17/95 (17%)
Query: 16 VIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
+ +RV + +PVG+ I +++A DAD G N VEY I+ DG G D +V
Sbjct: 274 IHLRVLESSPVGTAI-GSVKATDADTGKNAEVEYRII----------DGDGTDMFDIV-- 320
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ +G +TV + LD+E + Y + + A
Sbjct: 321 ----TEKDTQEGIITVKKPLDYESRRLYTLKVEAE 351
>gi|327276783|ref|XP_003223147.1| PREDICTED: cadherin-10-like [Anolis carolinensis]
Length = 789
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 17/95 (17%)
Query: 16 VIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V R+ + +PVG+ I +++A DAD G N +EY IV DG G+D +V
Sbjct: 274 VHFRIQESSPVGTPI-GSVKASDADVGRNAELEYRIV----------DGDGRDMFDIV-- 320
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ +G +TV + LD+E + Y + + A
Sbjct: 321 ----TQKDTQEGIITVRKPLDYENRRLYTLKVEAE 351
>gi|119625019|gb|EAX04614.1| FAT tumor suppressor homolog 1 (Drosophila), isoform CRA_a [Homo
sapiens]
Length = 3377
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 18/86 (20%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
P GS + + +RA DAD+G NG V Y + SQ V V++ F+IN+
Sbjct: 2823 PGGSRVIQ-IRASDADSGTNGQVMYSLDQSQ-------------SVEVIES---FAINM- 2864
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVAS 110
G +T + LD EK Y + +VAS
Sbjct: 2865 ETGWITTLKELDHEKRDNYQIKVVAS 2890
>gi|426350352|ref|XP_004042741.1| PREDICTED: protocadherin gamma-B1 [Gorilla gorilla gorilla]
Length = 810
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 54/111 (48%), Gaps = 26/111 (23%)
Query: 5 VKVSNRKRTIPVI------VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKN 58
++V++ PV V + + P G+++ + + A D D G+N + Y + S
Sbjct: 227 IRVTDANDNAPVFSQEVYRVSLQENVPWGTSVLR-VMATDQDEGINAEITYAFLNSP--- 282
Query: 59 IGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
I T S F++N P+ G +T N +LDFE+T RY++++ A
Sbjct: 283 IST---------------SLFNLN-PNTGDITTNGTLDFEETSRYVLSVEA 317
>gi|397475352|ref|XP_003809105.1| PREDICTED: cadherin-10 [Pan paniscus]
Length = 788
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 17/95 (17%)
Query: 16 VIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
+ +RV + +PVG+ I +++A DAD G N VEY I+ DG G D +V
Sbjct: 274 IHLRVLESSPVGTAI-GSVKATDADTGKNAEVEYRII----------DGDGTDMFDIV-- 320
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ +G +TV + LD+E + Y + + A
Sbjct: 321 ----TEKDTQEGIITVKKPLDYESRRLYTLKVEAE 351
>gi|395735689|ref|XP_002815502.2| PREDICTED: cadherin-10 [Pongo abelii]
Length = 792
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 17/95 (17%)
Query: 16 VIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
+ +RV + +PVG+ I +++A DAD G N VEY I+ DG G D +V
Sbjct: 274 IHLRVLESSPVGTAI-GSVKATDADTGKNAEVEYRII----------DGDGTDMFDIV-- 320
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ +G +TV + LD+E + Y + + A
Sbjct: 321 ----TEKDTQEGIITVKKPLDYESRRLYTLKVEAE 351
>gi|158284502|ref|XP_307205.4| AGAP011526-PA [Anopheles gambiae str. PEST]
gi|157020993|gb|EAA03222.4| AGAP011526-PA [Anopheles gambiae str. PEST]
Length = 1376
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 11/83 (13%)
Query: 28 STIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQG 87
+T F +RAVDAD N +V+Y I SQ+ I G+ + + T+ D G
Sbjct: 128 NTTFYRVRAVDADDNQNAVVKYSIFDSQNSGIRELFGLEEPQFTINDA-----------G 176
Query: 88 QVTVNRSLDFEKTQRYLVTIVAS 110
Q+ + ++LD E +L+ I+A
Sbjct: 177 QLRLAKTLDREVRDAHLIAILAE 199
>gi|358341131|dbj|GAA48880.1| protocadherin Fat 1 [Clonorchis sinensis]
Length = 5772
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 44/91 (48%), Gaps = 2/91 (2%)
Query: 20 VSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYF 79
VS+ PVG + + LRA D D+G G + Y + + T + SYF
Sbjct: 2714 VSEREPVGFLVLQ-LRATDPDSGYGGQITYSLESHHSGDTSPTQLTRHISDTSRESLSYF 2772
Query: 80 SINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ H GQ+T+ R+L+++K+ + +A+
Sbjct: 2773 ECD-EHTGQITLARNLNYQKSAVHQFWAIAT 2802
>gi|395510875|ref|XP_003759693.1| PREDICTED: cadherin-6 [Sarcophilus harrisii]
Length = 790
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 21/87 (24%)
Query: 24 TPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINL 83
TP+G ++A+DAD G N +EY I DG G D V+ +
Sbjct: 285 TPIG-----RIKAIDADVGENAEIEYSIT----------DGEGLDMFDVI------TDQE 323
Query: 84 PHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+G +TV + LDFEK + Y + + AS
Sbjct: 324 TQEGIITVKKVLDFEKKKLYTLKVEAS 350
>gi|391336951|ref|XP_003742838.1| PREDICTED: cadherin-89D-like [Metaseiulus occidentalis]
Length = 292
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 45/98 (45%), Gaps = 22/98 (22%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAG--VNGLVEYFIVPSQDKNIGTADGVGKDRVTV 72
P + V +LTPVG TIF+ + AVD D N V Y IV D N
Sbjct: 129 PYHLEVDELTPVGLTIFRGIHAVDRDKPNTPNSDVTYAIVGGNDNN-------------- 174
Query: 73 VDGYSYFSINLPHQGQVTVNRSLDFEKTQR-YLVTIVA 109
F+++ P +G + +N+ LD++ R Y + I A
Sbjct: 175 -----SFALSDPLEGIIVINKPLDYDHGTRVYKLQIQA 207
>gi|18087755|ref|NP_291063.1| protocadherin gamma-A2 precursor [Mus musculus]
gi|13876330|gb|AAK26085.1| protocadherin gamma A2 [Mus musculus]
gi|148678173|gb|EDL10120.1| mCG133388, isoform CRA_c [Mus musculus]
gi|223459982|gb|AAI39179.1| Protocadherin gamma subfamily A, 2 [Mus musculus]
Length = 931
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 19/92 (20%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
VRV + TPVG+ I + A DAD G N V YF Q+ + G D +
Sbjct: 249 VRVPENTPVGTRIL-TVTATDADEGYNAQVTYF----QEHDPGE----------TTDAFE 293
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
S + G +T+ +SLD+EK + + + I A
Sbjct: 294 LKSTS----GDITITKSLDYEKAKFHEIDIEA 321
>gi|443731666|gb|ELU16708.1| hypothetical protein CAPTEDRAFT_199171 [Capitella teleta]
Length = 1979
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 23/96 (23%)
Query: 14 IPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVV 73
+P + + +P+G+++FK + A D D G G V Y NI + DG+
Sbjct: 232 LPYRASLPEDSPMGTSVFK-VSATDPDNGEAGFVSY--------NITSKDGL-------- 274
Query: 74 DGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
FSIN G+VT+ + LD+E + Y + I+A
Sbjct: 275 -----FSINTA-TGEVTLAQDLDYETEKFYQLEIIA 304
>gi|224052330|ref|XP_002193468.1| PREDICTED: cadherin-related family member 1 [Taeniopygia guttata]
Length = 865
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 24/97 (24%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P IV+V + TP S+IFK + A+D D G G + YF+ +NI T
Sbjct: 141 PYIVQVPENTPSSSSIFK-VEAIDKDTGSGGSITYFL-----QNIHT------------- 181
Query: 75 GYSYFSINLPHQGQVTVNR--SLDFEKTQRYLVTIVA 109
+ F+I+ H G + + +LD+EK++ + V +VA
Sbjct: 182 --NKFTIDR-HSGVLRIKPGVTLDYEKSRTHFVVVVA 215
>gi|198437132|ref|XP_002124366.1| PREDICTED: similar to KIAA0279 protein [Ciona intestinalis]
Length = 2808
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 44/93 (47%), Gaps = 23/93 (24%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
VRV + V S I N+ A DAD+G+NGLV Y + G
Sbjct: 441 VRVYENARVNS-IIANISATDADSGMNGLVSYVL---------------------YSGRR 478
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F IN P G++++ LD+E T+RY + + A+
Sbjct: 479 TFRIN-PQTGEISLIARLDYEVTKRYQLRVRAT 510
>gi|148703182|gb|EDL35129.1| mCG142340, isoform CRA_b [Mus musculus]
Length = 1859
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 43/93 (46%), Gaps = 22/93 (23%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V +S+ PV S FK ++A D D+G NG + Y I D N G A G+ D
Sbjct: 1003 VTLSESEPVNSRFFK-VQASDKDSGANGEIAYTIT---DGNNGDAFGIFPD--------- 1049
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
GQ+ + LD E RY++ +VAS
Sbjct: 1050 ---------GQLYIKSELDRELQDRYVLLVVAS 1073
>gi|118090437|ref|XP_420680.2| PREDICTED: protocadherin Fat 1 [Gallus gallus]
Length = 4590
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 18/86 (20%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
P G+ + + ++ D D+G+NG V Y + PSQ+ +I + F+IN+
Sbjct: 2824 PAGTRVIQ-VKGTDLDSGLNGQVTYSLDPSQELDIIES----------------FAINM- 2865
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVAS 110
G +T + LD E +Y +T+VA+
Sbjct: 2866 ETGWITTLKELDHEMRDKYKITVVAA 2891
>gi|261289539|ref|XP_002604746.1| hypothetical protein BRAFLDRAFT_122557 [Branchiostoma floridae]
gi|229290074|gb|EEN60756.1| hypothetical protein BRAFLDRAFT_122557 [Branchiostoma floridae]
Length = 1252
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 49/99 (49%), Gaps = 20/99 (20%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P +S+L VG+T+ + A D D G +G V++F+ QD +D + D
Sbjct: 199 PAPTSISELIAVGTTVLR-ASATDRDIGASGNVQFFV---QDN---PSDPLADD------ 245
Query: 75 GYSYFSINLPHQGQVTVNRSLDFEKT----QRYLVTIVA 109
+F I LP QG +T+ ++++E +YL+ + A
Sbjct: 246 ---FFEIPLPAQGFITLKTAVNYEAADNTDHQYLLVVTA 281
>gi|391332942|ref|XP_003740885.1| PREDICTED: protein dachsous-like [Metaseiulus occidentalis]
Length = 3117
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 19/95 (20%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P++ VS+ T GS + + A D D+G+NGLV Y I+ +G GK T+
Sbjct: 1399 PIVFSVSENTSPGS-LLNAITAHDEDSGLNGLVRYSII--------EPNGSGKPTFTID- 1448
Query: 75 GYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
P G +T+ LD+EK +Y+ + A
Sbjct: 1449 ---------PVSGVITLIEPLDYEKQAQYIFVVEA 1474
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 19/93 (20%)
Query: 17 IVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGY 76
+ +++ VG+++ + L A D D G NG V Y I Q D
Sbjct: 240 VATIAENATVGTSVLRVL-ATDTDEGRNGEVRYSINRRQS-----------------DRE 281
Query: 77 SYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
YF+I+ P G++ VN+ LDFE + + + +VA
Sbjct: 282 QYFNID-PKSGEIFVNKPLDFETKESHELVVVA 313
>gi|443694652|gb|ELT95736.1| hypothetical protein CAPTEDRAFT_182594 [Capitella teleta]
Length = 2682
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 45/92 (48%), Gaps = 22/92 (23%)
Query: 20 VSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIV-PSQDKNIGTADGVGKDRVTVVDGYSY 78
V++ + +GSTI +RA D D+G NG +EY I+ PS G + V +D
Sbjct: 146 VTESSSIGSTII-TVRASDEDSGHNGEIEYSILNPS-----------GPNEVFNID---- 189
Query: 79 FSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
P G +T N+ LD EK Y + + AS
Sbjct: 190 -----PRVGSITTNKKLDREKHASYTLQVQAS 216
>gi|440900245|gb|ELR51425.1| Cadherin-related family member 1, partial [Bos grunniens mutus]
Length = 869
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 24/97 (24%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P +V+V + TP GS+I + +RAVD D G G V YF+ KN +
Sbjct: 141 PYVVQVPEDTPSGSSIAR-VRAVDRDTGSAGSVTYFL-----KNPHPTE----------- 183
Query: 75 GYSYFSINLPHQG--QVTVNRSLDFEKTQRYLVTIVA 109
FS++ H G ++ LDFEK + + VT+VA
Sbjct: 184 ----FSVDR-HSGVLRLRAGAILDFEKARAHFVTVVA 215
>gi|338716849|ref|XP_001917733.2| PREDICTED: LOW QUALITY PROTEIN: cadherin-23 [Equus caballus]
Length = 3354
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 44/96 (45%), Gaps = 23/96 (23%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P VR+ + TPVG+ IF + A D D G G V Y P
Sbjct: 136 PYSVRIPENTPVGTPIFI-VNATDPDLGAGGSVLYSFQPPS------------------- 175
Query: 75 GYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+F+I+ +G VTV R LD+E TQ Y +T+ A+
Sbjct: 176 --LFFAID-SARGIVTVIRELDYETTQAYQLTVNAT 208
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 40/85 (47%), Gaps = 23/85 (27%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
PVG+ I + A DAD+G LVEY + DG GK F+IN P
Sbjct: 2416 PVGTVILT-VTATDADSGNFALVEYSL----------GDGEGK-----------FAIN-P 2452
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVA 109
G + V SLD EK Y++T +A
Sbjct: 2453 VTGDIYVLSSLDREKKDHYILTALA 2477
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 18/94 (19%)
Query: 17 IVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGY 76
I+ + + TP+ S +++ + A D D G+NG V Y + K G D +
Sbjct: 2619 ILHIREETPLRSNVYE-VYATDKDEGLNGAVRYSFL----KTAGNRD------------W 2661
Query: 77 SYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
YF+I+ P G + + LD EK Y + +VAS
Sbjct: 2662 EYFTID-PISGLIQTAQRLDREKQAVYSLILVAS 2694
Score = 34.7 bits (78), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Query: 12 RTIPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFI---VPSQDKNIGTADGV 65
+ +P + V + TP G +I++ + A+D D G+NGLV Y + +P D I ++ GV
Sbjct: 891 QNLPFVAEVLEGTPAGVSIYQ-VVAIDLDEGLNGLVTYRMQVGMPRMDFLINSSSGV 946
>gi|397517968|ref|XP_003829175.1| PREDICTED: protocadherin gamma-B1 [Pan paniscus]
Length = 810
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 54/111 (48%), Gaps = 26/111 (23%)
Query: 5 VKVSNRKRTIPVI------VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKN 58
++V++ PV V + + P G+++ + + A D D G+N + Y + S
Sbjct: 227 IRVTDANDNAPVFSQEVYRVSLQENVPWGTSVLR-VMATDQDEGINAEITYAFLNSP--- 282
Query: 59 IGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
I T S F++N P+ G +T N +LDFE+T RY++++ A
Sbjct: 283 IST---------------SLFNLN-PNTGDITTNGTLDFEETSRYVLSVEA 317
>gi|118092647|ref|XP_421595.2| PREDICTED: cadherin-23 [Gallus gallus]
Length = 3365
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 45/101 (44%), Gaps = 23/101 (22%)
Query: 10 RKRTIPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDR 69
R P VR+ + TPVG+ IF + A D D G G V Y P
Sbjct: 137 RFHNQPYSVRIPENTPVGTPIFI-VNATDPDQGAGGSVLYSFQPPS-------------- 181
Query: 70 VTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
S+F+I+ +G VTV R LD+E TQ Y + + A+
Sbjct: 182 -------SFFAID-SGRGIVTVIRELDYEVTQAYQLQVNAT 214
>gi|443732026|gb|ELU16918.1| hypothetical protein CAPTEDRAFT_222008 [Capitella teleta]
Length = 4878
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 21/90 (23%)
Query: 20 VSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYF 79
+S+ T VG +F ++A+D D G+NG VEY I N+GTA F
Sbjct: 1304 ISEATEVGRELFT-VKAIDEDLGLNGFVEYSIA---GGNVGTA----------------F 1343
Query: 80 SINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
I+ + G++++ LD+E+ Y++ I A
Sbjct: 1344 HID-SNSGRLSLASPLDYEQQSLYILEIQA 1372
>gi|355691234|gb|EHH26419.1| T2-cadherin [Macaca mulatta]
Length = 783
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 17/95 (17%)
Query: 16 VIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
+ +RV + +PVG+ I +++A DAD G N VEY I+ DG G D +V
Sbjct: 297 IHLRVLESSPVGTAI-GSVKATDADTGKNAEVEYRII----------DGDGTDMFDIV-- 343
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ +G +TV + LD+E + Y + + A
Sbjct: 344 ----TEKDTQEGIITVKQPLDYESRRLYTLKVEAE 374
>gi|194208467|ref|XP_001502920.2| PREDICTED: protocadherin Fat 4 isoform 1 [Equus caballus]
Length = 4981
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 43/93 (46%), Gaps = 22/93 (23%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V +S+ PV S FK ++A D D+G NG + Y I + N G A G+ D
Sbjct: 1003 VTLSESEPVNSRFFK-VQAFDKDSGANGEIAYSIA---EGNTGDAFGIFPD--------- 1049
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
GQ+ + LD E RY++ ++AS
Sbjct: 1050 ---------GQLYIKSELDRELQDRYVLLVIAS 1073
>gi|47194716|emb|CAF87248.1| unnamed protein product [Tetraodon nigroviridis]
Length = 523
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 18/93 (19%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V + + PVG+T+ + + A DAD G NG V Y S ++N+
Sbjct: 98 VLLQENAPVGTTVIQ-VNATDADEGANGEVVYSFSNSMNQNV----------------LD 140
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F IN G++T+ +D+E+ RY V + AS
Sbjct: 141 LFEIN-ELTGEITIKGPIDYEENDRYEVEVEAS 172
>gi|291395181|ref|XP_002714131.1| PREDICTED: cadherin 10, type 2 [Oryctolagus cuniculus]
Length = 788
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 17/95 (17%)
Query: 16 VIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
+ +RV + +PVG+ I +++A DAD G N VEY I+ DG G D ++
Sbjct: 274 IHLRVLESSPVGTAI-GSVKATDADTGKNAEVEYRII----------DGDGTDMFDII-- 320
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ +G +TV + LD+E + Y + + A
Sbjct: 321 ----TEKDTQEGIITVKKQLDYESRRLYTLKVEAE 351
>gi|27807345|ref|NP_777248.1| cadherin-related family member 1 precursor [Bos taurus]
gi|75073580|sp|Q8WN91.1|CDHR1_BOVIN RecName: Full=Cadherin-related family member 1; AltName:
Full=Photoreceptor cadherin; Short=prCAD; AltName:
Full=Protocadherin-21; Flags: Precursor
gi|18182375|gb|AAL65139.1|AF426392_1 photoreceptor cadherin [Bos taurus]
Length = 867
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 46/106 (43%), Gaps = 42/106 (39%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P +V+V + TP GS+I + +RAVD D G G V YF+ KN
Sbjct: 139 PYVVQVPEDTPSGSSIAR-VRAVDRDTGSAGSVTYFL-----KN---------------- 176
Query: 75 GYSYFSINLPHQGQVTVNRS-----------LDFEKTQRYLVTIVA 109
PH + +V+R LDFEK + + VT+VA
Sbjct: 177 ---------PHPTEFSVDRHSGVLRLRAGAILDFEKARAHFVTVVA 213
>gi|410975450|ref|XP_004001382.1| PREDICTED: LOW QUALITY PROTEIN: cadherin-23, partial [Felis catus]
Length = 1169
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 44/96 (45%), Gaps = 23/96 (23%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P VR+ + TPVG+ IF + A D D G G V Y P
Sbjct: 87 PYSVRIPENTPVGTPIFI-VNATDPDLGAGGSVLYSFQPPS------------------- 126
Query: 75 GYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+F+I+ +G VTV R LD+E TQ Y +T+ A+
Sbjct: 127 --LFFAID-SARGIVTVIRELDYETTQAYQLTVNAT 159
Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Query: 12 RTIPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFI---VPSQDKNIGTADGV 65
+ +P + V + TP G ++++ + A+D D G+NGLV Y I +P D I ++ GV
Sbjct: 842 QNLPFVAEVLEGTPAGVSVYQ-VVAIDLDEGLNGLVSYRIQVGMPRMDFLINSSSGV 897
>gi|444705648|gb|ELW47051.1| Protocadherin Fat 1 [Tupaia chinensis]
Length = 4584
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 18/86 (20%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
P GS + + +RA D D+G NG V Y + SQ VD F+IN+
Sbjct: 2817 PAGSRVIQ-IRASDLDSGTNGQVMYSLDQSQS----------------VDVIESFAINM- 2858
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVAS 110
G +T + LD EK Y + +VAS
Sbjct: 2859 ETGWITTLKELDHEKRDSYQIKVVAS 2884
>gi|354479104|ref|XP_003501753.1| PREDICTED: cadherin-6 [Cricetulus griseus]
gi|344245509|gb|EGW01613.1| Cadherin-6 [Cricetulus griseus]
Length = 790
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 17/92 (18%)
Query: 19 RVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSY 78
+ + +P G+ I + ++A DAD G N +EY I DG G+D V+
Sbjct: 276 KTPESSPPGTPIGR-IKASDADVGENAEIEYSIT----------DGEGQDMFDVI----- 319
Query: 79 FSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ +G +TV + LDFEK + Y + + AS
Sbjct: 320 -TDQETQEGIITVKKLLDFEKKKVYTLKVEAS 350
>gi|340723065|ref|XP_003399918.1| PREDICTED: protocadherin-like wing polarity protein stan-like
[Bombus terrestris]
Length = 3163
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 41/86 (47%), Gaps = 12/86 (13%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
PVGST+ ++A D DAG N VEY I + T G G V D F I+ P
Sbjct: 380 PVGSTVV-TVKATDQDAGRNAEVEYSI-------LSTTSGSG---VANADDALTFRID-P 427
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVAS 110
G VT LD EKT+ Y V + S
Sbjct: 428 RTGVVTTRTPLDREKTEVYTVILSVS 453
>gi|241811209|ref|XP_002414572.1| conserved hypothetical protein [Ixodes scapularis]
gi|215508783|gb|EEC18237.1| conserved hypothetical protein [Ixodes scapularis]
Length = 236
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 22/101 (21%)
Query: 12 RTIPVIVRVSDLTPVGSTIFKNLRAVDADAG--VNGLVEYFIVPSQDKNIGTADGVGKDR 69
+ +P + V +LTPVG T+F+ + A+D D N V Y IV + N
Sbjct: 57 QNVPYHLEVDELTPVGLTVFRGVHAIDRDKPNTPNSDVTYAIVGGNENN----------- 105
Query: 70 VTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQR-YLVTIVA 109
F+++ P +G + +N+ LDF+ R Y + I A
Sbjct: 106 --------SFALSDPLEGIIVINKPLDFDHGPREYRLEIQA 138
>gi|449504736|ref|XP_004176434.1| PREDICTED: LOW QUALITY PROTEIN: cadherin-23 [Taeniopygia guttata]
Length = 3375
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 44/96 (45%), Gaps = 23/96 (23%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P VR+ + TPVG+ IF + A D D G G V Y P
Sbjct: 149 PYSVRIPENTPVGTPIFI-VNATDPDQGAGGSVLYSFQPPS------------------- 188
Query: 75 GYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
S+F+I+ +G VTV R LD+E TQ Y + + A+
Sbjct: 189 --SFFAID-SGRGIVTVIRELDYEVTQAYQLQVNAT 221
>gi|347543911|gb|AEP02528.1| CDH23, partial [Hipposideros armiger]
Length = 3209
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 23/96 (23%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P VR+ + TPVG+ IF + A D D G G V Y P +
Sbjct: 128 PYSVRIPEDTPVGTPIFI-VNATDPDLGAGGSVLYSFQPPSE------------------ 168
Query: 75 GYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+F+I+ +G VTV + LD+E TQ Y +T+ A+
Sbjct: 169 ---FFAID-SARGIVTVIQELDYETTQSYQLTVNAT 200
Score = 38.5 bits (88), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 41/85 (48%), Gaps = 23/85 (27%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
PVG+ I + + A DAD+G ++EY G +G GK FSIN P
Sbjct: 2406 PVGTVILR-VTATDADSGNYAVIEY----------GLGNGEGK-----------FSIN-P 2442
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVA 109
G + V SLD EK Y++T +A
Sbjct: 2443 TTGDIYVLSSLDREKKDHYILTAIA 2467
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 21/94 (22%)
Query: 14 IPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVV 73
+P+ V +S+ +PV S+ ++ A DAD+G N L+ + I +DR
Sbjct: 1844 LPMNVTISENSPV-SSFVAHILASDADSGCNALLTFNITAGN-----------RDRA--- 1888
Query: 74 DGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTI 107
F+IN G VTVNR LD E+ +Y +TI
Sbjct: 1889 -----FAINA-TTGIVTVNRPLDRERIPQYRLTI 1916
>gi|347543901|gb|AEP02523.1| CDH23, partial [Aselliscus stoliczkanus]
Length = 3138
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 23/96 (23%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P VR+ + TPVG+ IF + A D D G G V Y P +
Sbjct: 128 PYSVRIPEDTPVGTPIFI-VNATDPDLGAGGSVLYSFQPPSE------------------ 168
Query: 75 GYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+F+I+ +G VTV + LD+E TQ Y +T+ A+
Sbjct: 169 ---FFAID-SARGIVTVIQELDYETTQSYQLTVNAT 200
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 40/85 (47%), Gaps = 23/85 (27%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
PVG+ I + + A DAD+G ++EY G +G GK FSIN P
Sbjct: 2406 PVGTVILR-VTATDADSGNYAVIEY----------GLGNGEGK-----------FSIN-P 2442
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVA 109
G + V LD EK Y++T +A
Sbjct: 2443 TTGDIYVLSPLDREKKDHYILTAIA 2467
Score = 35.0 bits (79), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 21/94 (22%)
Query: 14 IPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVV 73
+P+ V +S+ +PV S+ ++ A DAD+G N L+ + I ++R
Sbjct: 1844 LPMNVTISENSPV-SSFVAHILASDADSGCNALLTFNITAGN-----------RERA--- 1888
Query: 74 DGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTI 107
F+IN G VTVNR LD E+ +Y +TI
Sbjct: 1889 -----FAINA-TTGIVTVNRPLDRERIPQYRLTI 1916
>gi|322800564|gb|EFZ21550.1| hypothetical protein SINV_01487 [Solenopsis invicta]
Length = 565
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 39/84 (46%), Gaps = 19/84 (22%)
Query: 26 VGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPH 85
VG+ + + A DADAG NG +EY I Q D F I+ P
Sbjct: 236 VGTPVLA-VNATDADAGDNGRIEYSINRRQS-----------------DREEMFRID-PE 276
Query: 86 QGQVTVNRSLDFEKTQRYLVTIVA 109
G V VN++LDFE + + + IVA
Sbjct: 277 TGMVYVNKALDFESKEHHELVIVA 300
>gi|395833100|ref|XP_003789583.1| PREDICTED: cadherin-10 [Otolemur garnettii]
Length = 788
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 17/95 (17%)
Query: 16 VIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
+ +RV + +PVG+ I +++A DAD G N VEY I+ DG G D ++
Sbjct: 274 IHLRVLESSPVGTAI-GSVKATDADTGKNAEVEYRII----------DGDGTDMFDII-- 320
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ +G +TV + LD+E + Y + + A
Sbjct: 321 ----TEKDTQEGIITVKKPLDYESRRLYTLKVEAE 351
>gi|326917119|ref|XP_003204849.1| PREDICTED: cadherin-10-like [Meleagris gallopavo]
Length = 789
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 17/95 (17%)
Query: 16 VIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
+ +R+ + +PVG+ I +++A DAD G N VEY IV DG G D +V
Sbjct: 274 IHLRIPESSPVGTAI-GSVKATDADIGKNAEVEYRIV----------DGDGTDMFDIV-- 320
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ +G +TV + LD+E + Y + + A
Sbjct: 321 ----TQRDTQEGIITVRKPLDYETRRLYTLKVEAE 351
>gi|426246688|ref|XP_004017124.1| PREDICTED: cadherin-10 [Ovis aries]
Length = 788
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 17/95 (17%)
Query: 16 VIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
+ +RV + +PVG+ I +++A DAD G N VEY I+ DG G D ++
Sbjct: 274 IHLRVLESSPVGTAI-GSVKATDADTGKNAEVEYRII----------DGDGTDMFDII-- 320
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ +G +TV + LD+E + Y + + A
Sbjct: 321 ----TEKDTQEGIITVKKPLDYESRRLYTLKVEAE 351
>gi|440907670|gb|ELR57787.1| Cadherin-10 [Bos grunniens mutus]
Length = 788
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 17/95 (17%)
Query: 16 VIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
+ +RV + +PVG+ I +++A DAD G N VEY I+ DG G D ++
Sbjct: 274 IHLRVLESSPVGTAI-GSVKATDADTGKNAEVEYRII----------DGDGTDMFDII-- 320
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ +G +TV + LD+E + Y + + A
Sbjct: 321 ----TEKDTQEGIITVKKPLDYESRRLYTLKVEAE 351
>gi|47213179|emb|CAF95368.1| unnamed protein product [Tetraodon nigroviridis]
Length = 3762
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 45/96 (46%), Gaps = 23/96 (23%)
Query: 14 IPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVV 73
+P + + + + G +++ AVD D G N + Y ++
Sbjct: 2017 LPFSIVIPESSEPGDVLYQ-ASAVDGDLGENASILY---------------------SLE 2054
Query: 74 DGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
+ YS F I+ PH G +++ R LDFE +Y++T++A
Sbjct: 2055 EDYSLFRID-PHAGDISLQRPLDFEALNKYVLTVLA 2089
>gi|410949753|ref|XP_003981582.1| PREDICTED: cadherin-10 [Felis catus]
Length = 773
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 17/95 (17%)
Query: 16 VIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
+ +RV + +PVG+ I +++A DAD G N VEY I+ DG G D ++
Sbjct: 274 IHLRVLESSPVGTAI-GSVKATDADTGKNAEVEYRII----------DGDGTDMFDII-- 320
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ +G +TV + LD+E + Y + + A
Sbjct: 321 ----TEKDTQEGIITVKKPLDYESRRLYTLKVEAE 351
>gi|402871232|ref|XP_003899578.1| PREDICTED: cadherin-10 [Papio anubis]
Length = 788
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 17/95 (17%)
Query: 16 VIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
+ +RV + +PVG+ I +++A DAD G N VEY I+ DG G D +V
Sbjct: 274 IHLRVLESSPVGTAI-GSVKATDADTGKNAEVEYRII----------DGDGTDMFDIV-- 320
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ +G +TV + LD+E + Y + + A
Sbjct: 321 ----TEKDTQEGIITVKQPLDYESRRLYTLKVEAE 351
>gi|395820393|ref|XP_003783552.1| PREDICTED: cadherin-related family member 1 [Otolemur garnettii]
Length = 858
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 24/97 (24%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P +V V + TP GS+IFK + AVD D G G V YF+ +N+ + DR
Sbjct: 139 PYVVLVPEDTPAGSSIFK-VHAVDKDTGSGGSVTYFL-----QNLHSTK-FAMDR----- 186
Query: 75 GYSYFSINLPHQG--QVTVNRSLDFEKTQRYLVTIVA 109
H G ++ +LD+E ++ + VT+VA
Sbjct: 187 ----------HSGVLRLQAGATLDYEMSRTHYVTVVA 213
>gi|311273524|ref|XP_003133908.1| PREDICTED: cadherin-10 [Sus scrofa]
Length = 788
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 17/95 (17%)
Query: 16 VIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
+ +RV + +PVG+ I +++A DAD G N VEY I+ DG G D ++
Sbjct: 274 IHLRVLESSPVGTAI-GSVKATDADTGKNAEVEYRII----------DGDGTDMFDII-- 320
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ +G +TV + LD+E + Y + + A
Sbjct: 321 ----TEKDTQEGIITVKKPLDYESRRLYTLKVEAE 351
>gi|195437548|ref|XP_002066702.1| GK24627 [Drosophila willistoni]
gi|194162787|gb|EDW77688.1| GK24627 [Drosophila willistoni]
Length = 3471
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 19/98 (19%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIV---PSQDKNIGTADGVGKDRVT 71
P+ + VS+ T VG+ I+ N A DADAG N ++Y ++ P N + D +T
Sbjct: 1452 PLELNVSEATSVGTIIY-NFTATDADAGHNAELQYRLLSYSPHHYPNESVGEIFAMDSLT 1510
Query: 72 VVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
G +++ LDFE + YL+ + A
Sbjct: 1511 ---------------GSLSLQSPLDFESIKEYLLVVQA 1533
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 18/94 (19%)
Query: 17 IVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGY 76
+V V + P G+ + + +RA+D D+G N + Y IV +D DG+
Sbjct: 1231 VVSVREEQPPGTEVVR-IRAIDRDSGQNASITYSIVKGRDS----------------DGH 1273
Query: 77 SYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
FSI+ P G + LD E+ Y + + A+
Sbjct: 1274 GLFSID-PQTGVIRTRTVLDHEERSIYRLGVAAT 1306
>gi|73953936|ref|XP_854194.1| PREDICTED: cadherin-10 isoform 1 [Canis lupus familiaris]
Length = 788
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 17/95 (17%)
Query: 16 VIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
+ +RV + +PVG+ I +++A DAD G N VEY I+ DG G D ++
Sbjct: 274 IHLRVLESSPVGTAI-GSVKATDADTGKNAEVEYRII----------DGDGTDMFDII-- 320
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ +G +TV + LD+E + Y + + A
Sbjct: 321 ----TEKDTQEGIITVKKPLDYESRRLYTLKVEAE 351
>gi|355749840|gb|EHH54178.1| T2-cadherin [Macaca fascicularis]
gi|380788279|gb|AFE66015.1| cadherin-10 preproprotein [Macaca mulatta]
Length = 788
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 17/95 (17%)
Query: 16 VIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
+ +RV + +PVG+ I +++A DAD G N VEY I+ DG G D +V
Sbjct: 274 IHLRVLESSPVGTAI-GSVKATDADTGKNAEVEYRII----------DGDGTDMFDIV-- 320
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ +G +TV + LD+E + Y + + A
Sbjct: 321 ----TEKDTQEGIITVKQPLDYESRRLYTLKVEAE 351
>gi|274325621|ref|NP_001069734.2| cadherin-10 precursor [Bos taurus]
gi|296475703|tpg|DAA17818.1| TPA: cadherin 10, type 2 (T2-cadherin) [Bos taurus]
Length = 788
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 17/95 (17%)
Query: 16 VIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
+ +RV + +PVG+ I +++A DAD G N VEY I+ DG G D ++
Sbjct: 274 IHLRVLESSPVGTAI-GSVKATDADTGKNAEVEYRII----------DGDGTDMFDII-- 320
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ +G +TV + LD+E + Y + + A
Sbjct: 321 ----TEKDTQEGIITVKKPLDYESRRLYTLKVEAE 351
>gi|348582123|ref|XP_003476826.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 4-like [Cavia
porcellus]
Length = 4819
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 22/93 (23%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V +S+ PV S FK ++A D D+G NG + Y I + N G A G+ D
Sbjct: 1003 VTLSESEPVNSRFFK-VQASDKDSGANGEIAYTI---SEGNTGDAFGIFPD--------- 1049
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
GQ+ + LD E RY++ +VAS
Sbjct: 1050 ---------GQLYIKSELDRELQDRYVLLVVAS 1073
>gi|195496048|ref|XP_002095528.1| GE19644 [Drosophila yakuba]
gi|194181629|gb|EDW95240.1| GE19644 [Drosophila yakuba]
Length = 3884
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 40/84 (47%), Gaps = 21/84 (25%)
Query: 26 VGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPH 85
VGS I +++A D D+ VNGLV Y NI D +G+ FSI P
Sbjct: 2588 VGSKIL-DIKATDEDSDVNGLVTY--------NIEKGDNIGQ-----------FSIE-PK 2626
Query: 86 QGQVTVNRSLDFEKTQRYLVTIVA 109
G ++V+R LD E Y + I A
Sbjct: 2627 NGTISVSRPLDRETISHYTLEIQA 2650
>gi|229577125|ref|NP_001153302.1| cadherin-12 precursor [Danio rerio]
Length = 800
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 44/96 (45%), Gaps = 23/96 (23%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
+RV + +PVGS++ + ++A D D G N VEY I+P DG S
Sbjct: 277 LRVPESSPVGSSVGR-VKAHDLDTGKNAEVEYSILPG-------------------DGGS 316
Query: 78 YFSI---NLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I +G V + + LDFE + Y + AS
Sbjct: 317 MFDIYSNKDTQEGTVILKKRLDFETRKAYTFKVEAS 352
>gi|296193009|ref|XP_002744358.1| PREDICTED: protocadherin gamma-B1 [Callithrix jacchus]
Length = 872
Score = 38.9 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 29/111 (26%), Positives = 54/111 (48%), Gaps = 25/111 (22%)
Query: 5 VKVSNRKRTIPV----IVRVS--DLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKN 58
++V++ PV + RVS + P G+++ + + A D D G+N + Y + S
Sbjct: 228 IRVTDANDNAPVFSQDVYRVSLQENVPWGTSVLR-VMATDQDEGINAEITYAFLNSP--- 283
Query: 59 IGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
+ +F++N P+ G +T N +LDFE+T RY++ + A
Sbjct: 284 --------------ISTSLFFNLN-PNTGDITTNGTLDFEETSRYVLGVEA 319
>gi|339242691|ref|XP_003377271.1| putative cadherin domain protein [Trichinella spiralis]
gi|316973941|gb|EFV57484.1| putative cadherin domain protein [Trichinella spiralis]
Length = 1264
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 17 IVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIV 52
IV ++D TPVG I + RA DAD+G+NG + Y+IV
Sbjct: 878 IVEITDHTPVGFPIL-HTRAEDADSGMNGKINYYIV 912
>gi|339258504|ref|XP_003369438.1| putative cadherin domain protein [Trichinella spiralis]
gi|316966323|gb|EFV50917.1| putative cadherin domain protein [Trichinella spiralis]
Length = 2240
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 19/96 (19%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
PVI + + TPVG+ I+ A DAD G G ++Y I+ D +G ++ +D
Sbjct: 790 PVIFSLPENTPVGTDIWM-YNATDADTGKFGRLKYRII---------DDDLGNSKMFFID 839
Query: 75 GYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
P +G + + LD+EK Y++ + A+
Sbjct: 840 ---------PLRGVLQLQSELDYEKCTEYVIVVEAT 866
>gi|339263900|ref|XP_003366918.1| putative cadherin domain protein [Trichinella spiralis]
gi|316965206|gb|EFV49989.1| putative cadherin domain protein [Trichinella spiralis]
Length = 386
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 17 IVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIV 52
IV ++D TPVG I + RA DAD+G+NG + Y+IV
Sbjct: 341 IVEITDHTPVGFPIL-HTRAEDADSGMNGKINYYIV 375
>gi|301770177|ref|XP_002920504.1| PREDICTED: cadherin-10-like [Ailuropoda melanoleuca]
gi|281338529|gb|EFB14113.1| hypothetical protein PANDA_009239 [Ailuropoda melanoleuca]
Length = 788
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 17/95 (17%)
Query: 16 VIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
+ +RV + +PVG+ I +++A DAD G N VEY I+ DG G D ++
Sbjct: 274 IHLRVLESSPVGTAI-GSVKATDADTGKNAEVEYRII----------DGDGTDMFDII-- 320
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ +G +TV + LD+E + Y + + A
Sbjct: 321 ----TEKDTQEGIITVKKPLDYESRRLYTLKVEAE 351
>gi|47216287|emb|CAF96583.1| unnamed protein product [Tetraodon nigroviridis]
Length = 3280
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 53/112 (47%), Gaps = 27/112 (24%)
Query: 5 VKVSNRKRTIPVI------VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKN 58
+ V++R PV +VS+ +P G+ + + + A D D G N LV + I+ K
Sbjct: 2590 LTVADRNDNAPVFSSTEYHAQVSESSPRGTRLVQ-VSARDPDLGANSLVRFDIISGNSKG 2648
Query: 59 IGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
++ ++ P G + VN+SLD+E+ +Y++T+ AS
Sbjct: 2649 -------------------HYKLD-PESGLLAVNQSLDYEQDPKYILTVRAS 2680
>gi|326923292|ref|XP_003207872.1| PREDICTED: cadherin-related family member 1-like [Meleagris
gallopavo]
Length = 759
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 48/97 (49%), Gaps = 24/97 (24%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P IV+V + +P GS+IFK + AVD D G G + YF+ +NI A+ DR
Sbjct: 133 PYIVQVPENSPSGSSIFK-IEAVDRDTGSGGSITYFL-----QNI-HANKFTIDR----- 180
Query: 75 GYSYFSINLPHQGQVTVNR--SLDFEKTQRYLVTIVA 109
H G + + +LD+EK++ + V VA
Sbjct: 181 ----------HSGVLRIKSGVTLDYEKSRTHFVVAVA 207
>gi|148703591|gb|EDL35538.1| mCG141119 [Mus musculus]
Length = 4592
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 18/86 (20%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
P GS + + +RA D D+G NG V Y + SQD +I + F+IN+
Sbjct: 2827 PGGSRVIQ-IRASDLDSGANGQVMYSLDQSQDADIIES----------------FAINM- 2868
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVAS 110
G +T + LD E+ Y + +VAS
Sbjct: 2869 ETGWITTLKELDHEERASYQIKVVAS 2894
>gi|157951641|ref|NP_001074755.2| FAT tumor suppressor homolog 1 precursor [Mus musculus]
Length = 4590
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 18/86 (20%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
P GS + + +RA D D+G NG V Y + SQD +I + F+IN+
Sbjct: 2825 PGGSRVIQ-IRASDLDSGANGQVMYSLDQSQDADIIES----------------FAINM- 2866
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVAS 110
G +T + LD E+ Y + +VAS
Sbjct: 2867 ETGWITTLKELDHEERASYQIKVVAS 2892
>gi|114107607|gb|AAI22936.1| pcdhgc5 protein [Xenopus (Silurana) tropicalis]
Length = 924
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 18/92 (19%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V V + TP + I K L A D D G+NG +EYF D T+
Sbjct: 249 VIVQENTPQNTVILK-LNATDRDEGLNGEIEYFF----------------DYHTLHSVKE 291
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
F++N + G+++VN +DFE+ + Y +++ A
Sbjct: 292 LFTLNQQY-GEISVNGVIDFEEKEFYEISVRA 322
>gi|338718927|ref|XP_001917231.2| PREDICTED: cadherin-10 [Equus caballus]
Length = 789
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 17/95 (17%)
Query: 16 VIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
+ +RV + +PVG+ I +++A DAD G N VEY I+ DG G D ++
Sbjct: 274 IHLRVLESSPVGTAI-GSVKATDADTGKNAEVEYRII----------DGDGTDMFDII-- 320
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ +G +TV + LD+E + Y + + A
Sbjct: 321 ----TDKDTQEGIITVKKPLDYESRRLYTLKVEAE 351
>gi|332030986|gb|EGI70612.1| Protein dachsous [Acromyrmex echinatior]
Length = 2470
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIV 52
P+IV VS+ T +GSTI+ NL A D D+G+NG + Y +V
Sbjct: 554 PIIVLVSETTAIGSTIY-NLTASDLDSGLNGELRYGLV 590
>gi|300794923|ref|NP_001179921.1| protocadherin Fat 1 precursor [Bos taurus]
Length = 4588
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 18/86 (20%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
P GS + + +RA D D+G NG V Y + SQ VD F++N+
Sbjct: 2823 PAGSRVIQ-IRASDLDSGSNGQVMYNLDQSQS----------------VDVIESFAVNM- 2864
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVAS 110
G +T R LD EK Y + +VAS
Sbjct: 2865 ETGWITTLRELDHEKRDSYQIKVVAS 2890
>gi|26006183|dbj|BAC41434.1| mKIAA0327 splice variant 1 [Mus musculus]
Length = 939
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 19/92 (20%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
VRV + TPVG+ I + A DAD G N V YF Q+ + G D +
Sbjct: 257 VRVPENTPVGTRIL-TVTATDADEGYNAQVTYF----QEHDPGE----------TSDAFE 301
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
S + G +T+ +SLD+EK + + + I A
Sbjct: 302 LKSTS----GDITITKSLDYEKAKFHEIDIEA 329
>gi|348536028|ref|XP_003455499.1| PREDICTED: protocadherin-8 [Oreochromis niloticus]
Length = 982
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 18/93 (19%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V +++ PVG + + + A D D G+NG V Y +DG+ ++
Sbjct: 247 VELNEDYPVGHRVLR-VHAFDPDDGINGEVMYAF----------SDGLS------LEAAR 289
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F ++ PH G VT+ +DFEK + Y ++I AS
Sbjct: 290 LFHLD-PHSGDVTLKALVDFEKRRSYELSIKAS 321
>gi|327267535|ref|XP_003218556.1| PREDICTED: cadherin-23-like [Anolis carolinensis]
Length = 3346
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 23/101 (22%)
Query: 10 RKRTIPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDR 69
R P VR+ + TPVG+ IF + A D D G G V Y PS +
Sbjct: 116 RFHNQPYSVRIPENTPVGTPIFI-VNATDPDQGAGGSVLYSFQPSSN------------- 161
Query: 70 VTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+F+I+ +G V+V R+LD+E TQ Y + + A+
Sbjct: 162 --------FFTID-SGRGIVSVIRALDYEVTQAYQLQVNAT 193
Score = 34.7 bits (78), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 23/85 (27%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
P+G+ I + +RA DAD+G ++Y + DG GK F IN P
Sbjct: 2401 PLGTIILR-VRATDADSGRFAQIQYSL----------GDGEGK-----------FGIN-P 2437
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVA 109
+ G + + +LD EK Y +T VA
Sbjct: 2438 NTGDIYILSALDREKKDHYTLTAVA 2462
>gi|301607154|ref|XP_002933176.1| PREDICTED: cadherin-12-like [Xenopus (Silurana) tropicalis]
Length = 766
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 44/96 (45%), Gaps = 23/96 (23%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
++V + +PVGS I K +RAVD D G N +EY IVP DG +
Sbjct: 249 LKVPEASPVGSPIGK-IRAVDPDFGRNAEIEYSIVPG-------------------DGGN 288
Query: 78 YFSINLP---HQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I +G + + + LDFE + Y + A+
Sbjct: 289 LFDIKTDDDTQEGIIFLIKPLDFETKKAYTFKVEAT 324
>gi|297294043|ref|XP_001084117.2| PREDICTED: cadherin-10-like [Macaca mulatta]
Length = 798
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 17/95 (17%)
Query: 16 VIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
+ +RV + +PVG+ I +++A DAD G N VEY I+ DG G D +V
Sbjct: 286 IHLRVLESSPVGTAI-GSVKATDADTGKNAEVEYRII----------DGDGTDMFDIV-- 332
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ +G +TV + LD+E + Y + + A
Sbjct: 333 ----TEKDTQEGIITVKQPLDYESRRLYTLKVEAE 363
>gi|440903408|gb|ELR54072.1| Protocadherin Fat 1 [Bos grunniens mutus]
Length = 4588
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 18/86 (20%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
P GS + + +RA D D+G NG V Y + SQ VD F++N+
Sbjct: 2823 PAGSRVIQ-IRASDLDSGSNGQVMYNLDQSQS----------------VDVIESFAVNM- 2864
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVAS 110
G +T R LD EK Y + +VAS
Sbjct: 2865 ETGWITTLRELDHEKRDSYQIKVVAS 2890
>gi|296472443|tpg|DAA14558.1| TPA: FAT tumor suppressor homolog 1-like [Bos taurus]
Length = 4588
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 18/86 (20%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
P GS + + +RA D D+G NG V Y + SQ VD F++N+
Sbjct: 2823 PAGSRVIQ-IRASDLDSGSNGQVMYNLDQSQS----------------VDVIESFAVNM- 2864
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVAS 110
G +T R LD EK Y + +VAS
Sbjct: 2865 ETGWITTLRELDHEKRDSYQIKVVAS 2890
>gi|444707751|gb|ELW48953.1| Cadherin-10 [Tupaia chinensis]
Length = 764
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 17/95 (17%)
Query: 16 VIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
+ +RV + +PVG+ I +++A DAD G N VEY I+ DG G D ++
Sbjct: 250 IHLRVLESSPVGTPI-GSVKATDADTGKNAEVEYRII----------DGDGTDMFDII-- 296
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ +G +TV + LD+E + Y + + A
Sbjct: 297 ----TEKDTQEGVITVKKPLDYESRRLYTLKVEAE 327
>gi|348522710|ref|XP_003448867.1| PREDICTED: cadherin-related family member 5-like [Oreochromis
niloticus]
Length = 680
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 25/92 (27%)
Query: 20 VSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPS-QDKNIGTADGVGKDRVTVVDGYSY 78
+S+LT V S +F ++AVDAD V + Y I PS QD +
Sbjct: 175 ISELTAVNSVVF-TVKAVDADGDV---ISYIIDPSSQDAQ-------------------F 211
Query: 79 FSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I+LP+ G+V +N+ LD+E T+ +L I+ +
Sbjct: 212 FRIDLPNTGKVVLNKPLDYE-TRTHLQLIMWA 242
>gi|126320877|ref|XP_001364775.1| PREDICTED: cadherin-10 [Monodelphis domestica]
Length = 788
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 17/95 (17%)
Query: 16 VIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
+ +RV + +PVG+ I +++A DAD G N +EY I+ DG G D ++
Sbjct: 274 IHLRVPESSPVGTAI-GSVKATDADTGKNAEIEYRII----------DGDGTDMFDII-- 320
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ +G +TV + LD+E + Y + + A
Sbjct: 321 ----TQKDTQEGILTVRKPLDYESRRLYTLKVEAE 351
>gi|296220222|ref|XP_002756214.1| PREDICTED: cadherin-related family member 1 [Callithrix jacchus]
Length = 859
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 25/97 (25%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P IV V + P GS+IFK + AVD D G G V YF+ +N+
Sbjct: 139 PYIVLVPEDIPAGSSIFK-VHAVDRDTGSGGSVTYFL-----QNL--------------- 177
Query: 75 GYSYFSINLPHQG--QVTVNRSLDFEKTQRYLVTIVA 109
+S F+++ H G ++ +LD+E+++ + +T+VA
Sbjct: 178 -HSPFAVDR-HSGVLRLQSGATLDYERSRTHYITVVA 212
>gi|6688786|emb|CAB65271.1| mouse fat 1 cadherin [Mus musculus]
Length = 4587
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 18/86 (20%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
P GS + + +RA D D+G NG V Y + SQD +I + F+IN+
Sbjct: 2825 PGGSRVIQ-IRASDLDSGANGQVMYSLDQSQDADIIES----------------FAINM- 2866
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVAS 110
G +T + LD E+ Y + +VAS
Sbjct: 2867 ETGWITTLKELDHEERASYQIKVVAS 2892
>gi|312384516|gb|EFR29227.1| hypothetical protein AND_02014 [Anopheles darlingi]
Length = 741
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 19/84 (22%)
Query: 26 VGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPH 85
+G+T+ + + A D DAG NGLVEY I Q D F I+ P
Sbjct: 260 LGTTVLQ-VYATDQDAGENGLVEYAINRRQS-----------------DKEQMFRID-PA 300
Query: 86 QGQVTVNRSLDFEKTQRYLVTIVA 109
G ++VN+ LDFE + + + +VA
Sbjct: 301 TGLISVNKPLDFETRELHELVVVA 324
>gi|334311091|ref|XP_001377866.2| PREDICTED: protocadherin gamma-B4-like [Monodelphis domestica]
Length = 814
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 16/93 (17%)
Query: 17 IVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGY 76
++ V + P G++I ++ A D D G NGLV Y IV + + +V G
Sbjct: 455 VIYVPENNPSGASI-GSVSASDPDVGENGLVSYSIV--------------RSDLDLVPGS 499
Query: 77 SYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
SY S++ H G + RS D+E+ + + V + A
Sbjct: 500 SYVSVS-DHNGDIFSQRSFDYEQVRTFEVILQA 531
>gi|148700221|gb|EDL32168.1| cadherin 23 (otocadherin), isoform CRA_b [Mus musculus]
Length = 1951
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 23/84 (27%)
Query: 26 VGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPH 85
VG+ I + + A DAD+G L+EY ++VDG F+IN P+
Sbjct: 1014 VGTVILR-VTATDADSGNFALIEY---------------------SLVDGEGKFAIN-PN 1050
Query: 86 QGQVTVNRSLDFEKTQRYLVTIVA 109
G ++V SLD EK Y++T +A
Sbjct: 1051 TGDISVLSSLDREKKDHYILTALA 1074
>gi|410901112|ref|XP_003964040.1| PREDICTED: protocadherin-15-like [Takifugu rubripes]
Length = 2753
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 29/102 (28%)
Query: 18 VRVSDLTPVGSTIFK----NLRAVDADAGVNGLVEYFIV-----PSQDKNIGTADGVGKD 68
V V++LTPVG+TIF N A D D G NG +EY ++ P +K + + +
Sbjct: 159 VAVNELTPVGTTIFTGFSGNNGATDIDDGPNGHIEYSVLYNPNDPESNKTVSVGNTLS-- 216
Query: 69 RVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
G + + L++E+ RYLV + A+
Sbjct: 217 ------------------GHIILAERLNYEERTRYLVVVQAN 240
>gi|119514250|gb|ABL75913.1| protocadherin 2A32 [Takifugu rubripes]
Length = 943
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 19/93 (20%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
VRVS+ PVG+ I K L A D D G NG + Y ++ + N
Sbjct: 245 VRVSEGVPVGTQILK-LNANDLDEGSNGDLRYSLMKRGNVN-----------------SE 286
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
FS++ P G++ V SLD+E++ Y + + A+
Sbjct: 287 KFSVD-PESGEIVVKASLDYEESGAYELRVQAT 318
>gi|50254110|gb|AAT72164.1| cadherin 23 isoform B2 [Mus musculus]
Length = 1079
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 23/84 (27%)
Query: 26 VGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPH 85
VG+ I + + A DAD+G L+EY ++VDG F+IN P+
Sbjct: 177 VGTVILR-VTATDADSGNFALIEY---------------------SLVDGEGKFAIN-PN 213
Query: 86 QGQVTVNRSLDFEKTQRYLVTIVA 109
G ++V SLD EK Y++T +A
Sbjct: 214 TGDISVLSSLDREKKDHYILTALA 237
>gi|50254108|gb|AAT72163.1| cadherin 23 isoform B1 [Mus musculus]
Length = 1114
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 23/84 (27%)
Query: 26 VGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPH 85
VG+ I + + A DAD+G L+EY ++VDG F+IN P+
Sbjct: 177 VGTVILR-VTATDADSGNFALIEY---------------------SLVDGEGKFAIN-PN 213
Query: 86 QGQVTVNRSLDFEKTQRYLVTIVA 109
G ++V SLD EK Y++T +A
Sbjct: 214 TGDISVLSSLDREKKDHYILTALA 237
>gi|351714550|gb|EHB17469.1| Cadherin-10 [Heterocephalus glaber]
Length = 788
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 17/95 (17%)
Query: 16 VIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
+ +RV + +PVG+ + +++A DAD G N VEY I+ DG G D +V
Sbjct: 274 IHLRVLESSPVGTAV-GSVKATDADTGKNAEVEYRII----------DGDGTDMFDIV-- 320
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ +G +TV + LD+E + Y + + A
Sbjct: 321 ----TEKDTQEGIITVKKPLDYESRRLYTLKVEAE 351
>gi|449475308|ref|XP_004175477.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin gamma-A3-like
[Taeniopygia guttata]
Length = 821
Score = 38.9 bits (89), Expect = 0.44, Method: Composition-based stats.
Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 19/92 (20%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V + + TP GST+ N+ A DADAG N + Y G GK V+ ++
Sbjct: 258 VSLREDTPPGSTVL-NISASDADAGTNAHITY--------------GFGKMPTKVLQKFT 302
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
+ +G +T+ LDFE T+ Y + + A
Sbjct: 303 VDA----QRGTITLQEELDFEDTRGYTLLVEA 330
>gi|296472099|tpg|DAA14214.1| TPA: protocadherin 21 precursor [Bos taurus]
Length = 868
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 44/106 (41%), Gaps = 42/106 (39%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P +V+V + TP GS+I + +RAVD D G G V YF
Sbjct: 139 PYVVQVPEDTPSGSSIAR-VRAVDRDTGSAGSVTYF------------------------ 173
Query: 75 GYSYFSINLPHQGQVTVNRS-----------LDFEKTQRYLVTIVA 109
+ PH + +V+R LDFEK + + VT+VA
Sbjct: 174 ------LKYPHPTEFSVDRHSGVLRLRAGAILDFEKARAHFVTVVA 213
>gi|410925630|ref|XP_003976283.1| PREDICTED: protocadherin beta-14-like [Takifugu rubripes]
Length = 810
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 18/93 (19%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V + + TP+G+T+ + + A DAD G NG + Y S ++N+
Sbjct: 250 VMLHENTPIGTTVIQ-VNATDADDGPNGEIVYSFSNSMNQNV----------------LD 292
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F IN G++TV +D+E+ +RY + + AS
Sbjct: 293 LFDIN-EVTGEITVKGLIDYEENERYEIEVEAS 324
>gi|395510871|ref|XP_003759691.1| PREDICTED: cadherin-10 [Sarcophilus harrisii]
Length = 788
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 17/95 (17%)
Query: 16 VIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
+ +RV + +PVG+ I +++A DAD G N +EY I+ DG G D ++
Sbjct: 274 IHLRVPESSPVGTAI-GSVKATDADTGKNAEIEYRII----------DGDGTDMFDII-- 320
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ +G +TV + LD+E + Y + + A
Sbjct: 321 ----TQKDTQEGILTVRKPLDYESRRLYTLKVEAE 351
>gi|386118331|gb|AFI99113.1| dachsous protocadherin [Clytia hemisphaerica]
Length = 3438
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 40/93 (43%), Gaps = 20/93 (21%)
Query: 17 IVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGY 76
++++ + P S +F+ A D D G NG V Y I+ S G
Sbjct: 2698 VIKIKENMPPHSVVFR-AGATDKDIGENGRVSYRILES-------------------GGR 2737
Query: 77 SYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
YF +N G V RSLD+EK Y + ++A
Sbjct: 2738 DYFYMNESIPGWVYTKRSLDYEKNSSYTLRVLA 2770
>gi|195112356|ref|XP_002000740.1| GI10394 [Drosophila mojavensis]
gi|193917334|gb|EDW16201.1| GI10394 [Drosophila mojavensis]
Length = 2242
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 19/89 (21%)
Query: 14 IPVIVRVSDLTPVGSTIFKNLRAVDADAG--VNGLVEYFI--VPSQDKNIGTADGVGKDR 69
+P +V V + TPV S IF+ ++A D D N V + + VP Q
Sbjct: 163 VPYVVDVDENTPVDSIIFEGVQAFDRDKPNTPNSEVHFSMSTVPEQ-------------- 208
Query: 70 VTVVDGYSYFSINLPHQGQVTVNRSLDFE 98
DG YF++ PH+ + + R LDF+
Sbjct: 209 -LSADGRPYFALKSPHRPLLILKRELDFD 236
>gi|194874570|ref|XP_001973423.1| GG16079 [Drosophila erecta]
gi|190655206|gb|EDV52449.1| GG16079 [Drosophila erecta]
Length = 4446
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 45/92 (48%), Gaps = 21/92 (22%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V V++ VGS I +++A D D+ +NGLV Y NI D +G+
Sbjct: 3146 VNVNEDIFVGSKIL-DIKATDEDSDINGLVTY--------NIEKGDNIGQ---------- 3186
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
FSI+ P G ++V+R LD E Y + I A
Sbjct: 3187 -FSID-PKNGTISVSRPLDRETIPHYTLEIQA 3216
>gi|442633558|ref|NP_001027138.2| kugelei, isoform D [Drosophila melanogaster]
gi|440216049|gb|AAZ66056.2| kugelei, isoform D [Drosophila melanogaster]
Length = 4699
Score = 38.5 bits (88), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 41/84 (48%), Gaps = 21/84 (25%)
Query: 26 VGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPH 85
VGS I +++A D D+ VNGLV Y NI D +G+ FSI+ P
Sbjct: 3393 VGSKIL-DVKATDEDSDVNGLVTY--------NIERGDNIGQ-----------FSID-PK 3431
Query: 86 QGQVTVNRSLDFEKTQRYLVTIVA 109
G ++V+R LD E Y + I A
Sbjct: 3432 NGTISVSRPLDRETISHYTLEIQA 3455
>gi|442633556|ref|NP_649171.3| kugelei, isoform C [Drosophila melanogaster]
gi|440216048|gb|AAF49078.3| kugelei, isoform C [Drosophila melanogaster]
Length = 4689
Score = 38.5 bits (88), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 41/84 (48%), Gaps = 21/84 (25%)
Query: 26 VGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPH 85
VGS I +++A D D+ VNGLV Y NI D +G+ FSI+ P
Sbjct: 3393 VGSKIL-DVKATDEDSDVNGLVTY--------NIERGDNIGQ-----------FSID-PK 3431
Query: 86 QGQVTVNRSLDFEKTQRYLVTIVA 109
G ++V+R LD E Y + I A
Sbjct: 3432 NGTISVSRPLDRETISHYTLEIQA 3455
>gi|432879584|ref|XP_004073499.1| PREDICTED: uncharacterized protein LOC101171842 [Oryzias latipes]
Length = 8377
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 38/85 (44%), Gaps = 18/85 (21%)
Query: 26 VGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPH 85
VGS + + A D D GVN VEY D I Y FSIN H
Sbjct: 3017 VGSNVI-TVNATDLDEGVNADVEYSFGGELDPQI----------------YEIFSIN-KH 3058
Query: 86 QGQVTVNRSLDFEKTQRYLVTIVAS 110
G+++V +DFEK + Y + + AS
Sbjct: 3059 SGEISVKGEIDFEKAEVYKLDVHAS 3083
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 53/116 (45%), Gaps = 24/116 (20%)
Query: 1 LTCTVKVSNRKRTIPVI------VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPS 54
L TV +S+ PV V V + P G+ + + A D+D GVN +EY +
Sbjct: 1537 LNITVIISDVNDNPPVCDKQKYTVTVKENAPTGTYLL-TVNASDSDEGVNSEIEYSLR-- 1593
Query: 55 QDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
K R V D ++ S G+VTVN +LD+E+ Q Y + ++A+
Sbjct: 1594 -----------SKFRGLVSDPFALNS----KTGKVTVNGNLDYEEKQVYEINVMAA 1634
Score = 34.7 bits (78), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 18/87 (20%)
Query: 24 TPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINL 83
+P+G+T+ + + A D D G+NG V Y + G KD++ +F IN
Sbjct: 7027 SPIGTTVIQ-VNATDLDDGINGEVTY-----------SFGGEVKDKIR-----EFFEIN- 7068
Query: 84 PHQGQVTVNRSLDFEKTQRYLVTIVAS 110
G++ V ++DFE R+ + I AS
Sbjct: 7069 SDTGEIIVKGNIDFELQDRFDIDIQAS 7095
>gi|156351334|ref|XP_001622464.1| predicted protein [Nematostella vectensis]
gi|156209012|gb|EDO30364.1| predicted protein [Nematostella vectensis]
Length = 2058
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 21/92 (22%)
Query: 19 RVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSY 78
+ + TP+GST+ + A D D G+N + Y I+ G +DGV
Sbjct: 161 EIEENTPIGSTVVT-VEARDGDVGINNPILYEIIS------GNSDGV------------- 200
Query: 79 FSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F+I+ + G +TVN S+D EKT + +T+ AS
Sbjct: 201 FTID-SNTGVITVNGSIDAEKTDVFRITVKAS 231
Score = 37.7 bits (86), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 19/96 (19%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P + ++++ VG+TI K + A+DAD+G N V+Y K
Sbjct: 50 PYMAKIAENARVGTTILK-ISAIDADSGTNSQVQY-----------------KFSNATAT 91
Query: 75 GYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+FS+N + G++T+ LDFE + Y++ ++A
Sbjct: 92 QTPFFSLNSVN-GELTLGGPLDFEVARSYMLVVIAE 126
>gi|25090328|sp|Q9VW71.2|FAT2_DROME RecName: Full=Fat-like cadherin-related tumor suppressor homolog;
AltName: Full=Protein kugelei; Flags: Precursor
Length = 4705
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 41/84 (48%), Gaps = 21/84 (25%)
Query: 26 VGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPH 85
VGS I +++A D D+ VNGLV Y NI D +G+ FSI+ P
Sbjct: 3409 VGSKIL-DVKATDEDSDVNGLVTY--------NIERGDNIGQ-----------FSID-PK 3447
Query: 86 QGQVTVNRSLDFEKTQRYLVTIVA 109
G ++V+R LD E Y + I A
Sbjct: 3448 NGTISVSRPLDRETISHYTLEIQA 3471
>gi|410913723|ref|XP_003970338.1| PREDICTED: protocadherin Fat 1-like [Takifugu rubripes]
Length = 1748
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 18/93 (19%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V + + +P+G+T+ + + A DAD G NG V Y S ++N+
Sbjct: 241 VMLHENSPIGTTVIQ-VNATDADDGPNGEVVYSFSNSMNQNV----------------LD 283
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F IN G++TV +D+E+ +RY + + AS
Sbjct: 284 LFDIN-EITGEITVKGPIDYEENERYEIEVEAS 315
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 42/93 (45%), Gaps = 18/93 (19%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V + + P+GS + + + A D D G NG V Y S NI +
Sbjct: 1190 VTLPENAPLGSAVVQ-VNATDLDEGQNGEVSYSFGNSVSNNI----------------FQ 1232
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F IN P G++TV +D+E+ +Y + I AS
Sbjct: 1233 LFGIN-PSTGEITVKGLIDYEQKDKYEIEIEAS 1264
>gi|195429581|ref|XP_002062836.1| GK19483 [Drosophila willistoni]
gi|194158921|gb|EDW73822.1| GK19483 [Drosophila willistoni]
Length = 3590
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 42/95 (44%), Gaps = 16/95 (16%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P V + PVG+T+ + A D+D G+N + Y + +GTAD
Sbjct: 895 PYSSSVFEDAPVGTTVLV-VSATDSDVGINAQITYSLNEESINGLGTADP---------- 943
Query: 75 GYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
FSIN G + N LD E T YL+T+ A
Sbjct: 944 ----FSINQ-QTGAIVTNAPLDRETTSGYLLTVTA 973
>gi|119514198|gb|ABL75861.1| protocadherin 2A21 [Takifugu rubripes]
Length = 938
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 18/93 (19%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V + + +P+G+T+ + + A DAD G NG V Y S ++N+
Sbjct: 250 VMLHENSPIGTTVIQ-VNATDADDGPNGEVVYSFSNSMNQNV----------------LD 292
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F IN G++TV +D+E+ +RY + + AS
Sbjct: 293 LFDIN-EITGEITVKGPIDYEENERYEIEVEAS 324
>gi|14039469|gb|AAK53234.1|AF326309_1 protocadherin-betaP [Mus musculus]
Length = 216
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 19/91 (20%)
Query: 19 RVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSY 78
++ + +P+G I + A D D GVNG + Y + +D + K
Sbjct: 10 QIPEDSPIGFLII-TVSATDKDIGVNGQISYSL-------FQVSDDISK----------T 51
Query: 79 FSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
FSI+ P G+V + LDFEKTQ Y + I A
Sbjct: 52 FSIH-PLTGEVRLKEHLDFEKTQSYEINIEA 81
>gi|116110556|gb|ABJ74657.1| stan [Drosophila miranda]
Length = 549
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 42/95 (44%), Gaps = 16/95 (16%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P V + PVG+T+ + A D+D G+N + Y + +G+ D
Sbjct: 87 PYSASVFEDAPVGTTVLV-VSATDSDVGINAQITYSLNEESINGLGSPDP---------- 135
Query: 75 GYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
FSIN P G + N LD E T YL+T+ +
Sbjct: 136 ----FSIN-PQTGAIVTNAPLDRETTSGYLLTVTS 165
>gi|12330560|gb|AAG52817.1|AF308939_1 cadherin-related 23 protein [Mus musculus]
Length = 3354
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 23/84 (27%)
Query: 26 VGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPH 85
VG+ I + + A DAD+G L+EY ++VDG F+IN P+
Sbjct: 2417 VGTVILR-VTATDADSGNFALIEY---------------------SLVDGEGKFAIN-PN 2453
Query: 86 QGQVTVNRSLDFEKTQRYLVTIVA 109
G ++V SLD EK Y++T +A
Sbjct: 2454 TGDISVLSSLDREKKDHYILTALA 2477
Score = 37.7 bits (86), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 44/96 (45%), Gaps = 23/96 (23%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P VR+ + TPVG+ IF + A D D G G V Y P
Sbjct: 136 PYSVRIPENTPVGTPIFI-VNATDPDLGAGGSVLYSFQPPS------------------- 175
Query: 75 GYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+F+I+ +G VTV + LD+E TQ Y +T+ A+
Sbjct: 176 --PFFAID-SARGIVTVIQELDYEVTQAYQLTVNAT 208
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 21/99 (21%)
Query: 12 RTIPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVT 71
R +P + + + TP G ++++ + A+D D G+NGLV Y + VG R+
Sbjct: 891 RNLPFVAEILEGTPAGVSVYQ-VVAIDLDEGLNGLVSYRM------------QVGMPRMD 937
Query: 72 VVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F IN G VT LD E+ Y + +VAS
Sbjct: 938 -------FVIN-STSGVVTTTAELDRERIAEYQLRVVAS 968
>gi|410913731|ref|XP_003970342.1| PREDICTED: uncharacterized protein LOC101075470 [Takifugu rubripes]
Length = 4803
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 19/93 (20%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
VRVS+ PVG+ I K L A D D G NG + Y ++ + N
Sbjct: 4252 VRVSEGVPVGTQILK-LNANDLDEGSNGDLRYSLMKRGNVN-----------------SE 4293
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
FS++ P G++ V SLD+E++ Y + + A+
Sbjct: 4294 KFSVD-PESGEIVVKASLDYEESGAYELRVQAT 4325
>gi|363738906|ref|XP_003642093.1| PREDICTED: protocadherin gamma-B1-like [Gallus gallus]
Length = 917
Score = 38.5 bits (88), Expect = 0.50, Method: Composition-based stats.
Identities = 34/107 (31%), Positives = 46/107 (42%), Gaps = 29/107 (27%)
Query: 5 VKVSNRKRTIPVI------VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFI--VPSQD 56
V VS+ PV ++ + PVGS + + +RA DADAG NG V YF VP
Sbjct: 362 VNVSDANDNAPVFNKNAYDAQMRENLPVGSLVLQ-VRAADADAGSNGRVSYFFGNVPESV 420
Query: 57 KNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQRY 103
+ S FSI+ G+V LDFE+ +Y
Sbjct: 421 R-------------------SLFSID-AESGEVRTAGPLDFEERSKY 447
>gi|358001060|ref|NP_001239564.1| cadherin-23 isoform 2 precursor [Mus musculus]
Length = 3352
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 23/84 (27%)
Query: 26 VGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPH 85
VG+ I + + A DAD+G L+EY ++VDG F+IN P+
Sbjct: 2415 VGTVILR-VTATDADSGNFALIEY---------------------SLVDGEGKFAIN-PN 2451
Query: 86 QGQVTVNRSLDFEKTQRYLVTIVA 109
G ++V SLD EK Y++T +A
Sbjct: 2452 TGDISVLSSLDREKKDHYILTALA 2475
Score = 37.7 bits (86), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 44/96 (45%), Gaps = 23/96 (23%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P VR+ + TPVG+ IF + A D D G G V Y P
Sbjct: 136 PYSVRIPENTPVGTPIFI-VNATDPDLGAGGSVLYSFQPPS------------------- 175
Query: 75 GYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+F+I+ +G VTV + LD+E TQ Y +T+ A+
Sbjct: 176 --PFFAID-SARGIVTVIQELDYEVTQAYQLTVNAT 208
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 21/99 (21%)
Query: 12 RTIPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVT 71
R +P + + + TP G ++++ + A+D D G+NGLV Y + VG R+
Sbjct: 889 RNLPFVAEILEGTPAGVSVYQ-VVAIDLDEGLNGLVSYRM------------QVGMPRMD 935
Query: 72 VVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F IN G VT LD E+ Y + +VAS
Sbjct: 936 -------FVIN-STSGVVTTTAELDRERIAEYQLRVVAS 966
>gi|311250321|ref|XP_003124098.1| PREDICTED: protocadherin beta-5-like [Sus scrofa]
Length = 785
Score = 38.5 bits (88), Expect = 0.50, Method: Composition-based stats.
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 26/96 (27%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVT---VVD 74
V++ + +P+ +T+ + A D DAG NG V Y + D VT V+D
Sbjct: 249 VQIPENSPL-NTLVAAVSARDLDAGTNGNVAYALFQG-------------DEVTQPFVID 294
Query: 75 GYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ G++ + R+LDFE+TQRY V I A+
Sbjct: 295 ELT---------GEIRLQRALDFEETQRYTVEITAT 321
>gi|195114028|ref|XP_002001569.1| GI16125 [Drosophila mojavensis]
gi|193912144|gb|EDW11011.1| GI16125 [Drosophila mojavensis]
Length = 5013
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 21/90 (23%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V V + P+GSTI + A D D G NG++ Y IV D
Sbjct: 3088 VIVPENEPIGSTILT-VSATDKDNGPNGMLHYNIVDGNDS-------------------E 3127
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTI 107
F++N H G +T+ + LD+++ Q Y + I
Sbjct: 3128 NFNVN-KHTGAITIMQPLDYDQMQEYHLNI 3156
>gi|116110536|gb|ABJ74647.1| stan [Drosophila miranda]
gi|116110538|gb|ABJ74648.1| stan [Drosophila miranda]
gi|116110540|gb|ABJ74649.1| stan [Drosophila miranda]
gi|116110542|gb|ABJ74650.1| stan [Drosophila miranda]
gi|116110544|gb|ABJ74651.1| stan [Drosophila miranda]
gi|116110546|gb|ABJ74652.1| stan [Drosophila miranda]
gi|116110548|gb|ABJ74653.1| stan [Drosophila miranda]
gi|116110550|gb|ABJ74654.1| stan [Drosophila miranda]
gi|116110552|gb|ABJ74655.1| stan [Drosophila miranda]
gi|116110554|gb|ABJ74656.1| stan [Drosophila miranda]
gi|116110558|gb|ABJ74658.1| stan [Drosophila miranda]
gi|116110560|gb|ABJ74659.1| stan [Drosophila miranda]
gi|116110562|gb|ABJ74660.1| stan [Drosophila miranda]
gi|116110564|gb|ABJ74661.1| stan [Drosophila miranda]
gi|116110566|gb|ABJ74662.1| stan [Drosophila miranda]
gi|116110568|gb|ABJ74663.1| stan [Drosophila miranda]
gi|116110570|gb|ABJ74664.1| stan [Drosophila miranda]
Length = 549
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 42/95 (44%), Gaps = 16/95 (16%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P V + PVG+T+ + A D+D G+N + Y + +G+ D
Sbjct: 87 PYSASVFEDAPVGTTVLV-VSATDSDVGINAQITYSLNEESINGLGSPDP---------- 135
Query: 75 GYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
FSIN P G + N LD E T YL+T+ +
Sbjct: 136 ----FSIN-PQTGAIVTNAPLDRETTSGYLLTVTS 165
>gi|197098194|ref|NP_001125246.1| cadherin-6 [Pongo abelii]
gi|55727434|emb|CAH90472.1| hypothetical protein [Pongo abelii]
Length = 790
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 17/91 (18%)
Query: 19 RVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSY 78
R + +P+G+ I + ++A DAD G N +EY I DG G D V+
Sbjct: 276 RTPESSPLGTPIGR-IKASDADVGENAEIEYSIT----------DGEGLDMFDVI----- 319
Query: 79 FSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
+ +G +TV + LDFEK + Y + + A
Sbjct: 320 -TDQETQEGIITVKKLLDFEKKKVYTLKVEA 349
>gi|341940299|sp|Q99PF4.2|CAD23_MOUSE RecName: Full=Cadherin-23; AltName: Full=Otocadherin; Flags:
Precursor
Length = 3354
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 23/84 (27%)
Query: 26 VGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPH 85
VG+ I + + A DAD+G L+EY ++VDG F+IN P+
Sbjct: 2417 VGTVILR-VTATDADSGNFALIEY---------------------SLVDGEGKFAIN-PN 2453
Query: 86 QGQVTVNRSLDFEKTQRYLVTIVA 109
G ++V SLD EK Y++T +A
Sbjct: 2454 TGDISVLSSLDREKKDHYILTALA 2477
Score = 37.7 bits (86), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 44/96 (45%), Gaps = 23/96 (23%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P VR+ + TPVG+ IF + A D D G G V Y P
Sbjct: 136 PYSVRIPENTPVGTPIFI-VNATDPDLGAGGSVLYSFQPPS------------------- 175
Query: 75 GYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+F+I+ +G VTV + LD+E TQ Y +T+ A+
Sbjct: 176 --PFFAID-SARGIVTVIQELDYEVTQAYQLTVNAT 208
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 21/99 (21%)
Query: 12 RTIPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVT 71
R +P + + + TP G ++++ + A+D D G+NGLV Y + VG R+
Sbjct: 891 RNLPFVAEILEGTPAGVSVYQ-VVAIDLDEGLNGLVSYRM------------QVGMPRMD 937
Query: 72 VVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F IN G VT LD E+ Y + +VAS
Sbjct: 938 -------FVIN-STSGVVTTTAELDRERIAEYQLRVVAS 968
>gi|60417438|emb|CAI59611.1| cadherin 23 [Mus musculus]
Length = 3352
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 23/84 (27%)
Query: 26 VGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPH 85
VG+ I + + A DAD+G L+EY ++VDG F+IN P+
Sbjct: 2415 VGTVILR-VTATDADSGNFALIEY---------------------SLVDGEGKFAIN-PN 2451
Query: 86 QGQVTVNRSLDFEKTQRYLVTIVA 109
G ++V SLD EK Y++T +A
Sbjct: 2452 TGDISVLSSLDREKKDHYILTALA 2475
Score = 37.7 bits (86), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 44/96 (45%), Gaps = 23/96 (23%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P VR+ + TPVG+ IF + A D D G G V Y P
Sbjct: 136 PYSVRIPENTPVGTPIFI-VNATDPDLGAGGSVLYSFQPPS------------------- 175
Query: 75 GYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+F+I+ +G VTV + LD+E TQ Y +T+ A+
Sbjct: 176 --PFFAID-SARGIVTVIQELDYEVTQAYQLTVNAT 208
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 21/99 (21%)
Query: 12 RTIPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVT 71
R +P + + + TP G ++++ + A+D D G+NGLV Y + VG R+
Sbjct: 889 RNLPFVAEILEGTPAGVSVYQ-VVAIDLDEGLNGLVSYRM------------QVGMPRMD 935
Query: 72 VVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F IN G VT LD E+ Y + +VAS
Sbjct: 936 -------FVIN-STSGVVTTTAELDRERIAEYQLRVVAS 966
>gi|332234763|ref|XP_003266573.1| PREDICTED: protocadherin gamma-B1 [Nomascus leucogenys]
Length = 810
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 26/111 (23%)
Query: 5 VKVSNRKRTIPVI------VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKN 58
++V++ PV V + + P G+++ + L A D D G+N + Y + S
Sbjct: 227 IRVTDANDNAPVFSQEVYRVSLQENVPWGTSVLRVL-ATDQDEGINAEITYAFLNSP--- 282
Query: 59 IGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
I T S F++N P+ G +T N +LDFE+T RY++ + A
Sbjct: 283 IST---------------SLFNLN-PNTGDITTNGTLDFEETSRYVLGVEA 317
>gi|124517680|ref|NP_075859.2| cadherin-23 isoform 1 precursor [Mus musculus]
gi|148700222|gb|EDL32169.1| cadherin 23 (otocadherin), isoform CRA_c [Mus musculus]
Length = 3354
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 23/84 (27%)
Query: 26 VGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPH 85
VG+ I + + A DAD+G L+EY ++VDG F+IN P+
Sbjct: 2417 VGTVILR-VTATDADSGNFALIEY---------------------SLVDGEGKFAIN-PN 2453
Query: 86 QGQVTVNRSLDFEKTQRYLVTIVA 109
G ++V SLD EK Y++T +A
Sbjct: 2454 TGDISVLSSLDREKKDHYILTALA 2477
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 44/96 (45%), Gaps = 23/96 (23%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P VR+ + TPVG+ IF + A D D G G V Y P
Sbjct: 136 PYSVRIPENTPVGTPIFI-VNATDPDLGAGGSVLYSFQPPS------------------- 175
Query: 75 GYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+F+I+ +G VTV + LD+E TQ Y +T+ A+
Sbjct: 176 --PFFAID-SARGIVTVIQELDYEVTQAYQLTVNAT 208
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 21/99 (21%)
Query: 12 RTIPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVT 71
R +P + + + TP G ++++ + A+D D G+NGLV Y + VG R+
Sbjct: 891 RNLPFVAEILEGTPAGVSVYQ-VVAIDLDEGLNGLVSYRM------------QVGMPRMD 937
Query: 72 VVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F IN G VT LD E+ Y + +VAS
Sbjct: 938 -------FVIN-STSGVVTTTAELDRERIAEYQLRVVAS 968
>gi|148700220|gb|EDL32167.1| cadherin 23 (otocadherin), isoform CRA_a [Mus musculus]
Length = 3319
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 23/84 (27%)
Query: 26 VGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPH 85
VG+ I + + A DAD+G L+EY ++VDG F+IN P+
Sbjct: 2417 VGTVILR-VTATDADSGNFALIEY---------------------SLVDGEGKFAIN-PN 2453
Query: 86 QGQVTVNRSLDFEKTQRYLVTIVA 109
G ++V SLD EK Y++T +A
Sbjct: 2454 TGDISVLSSLDREKKDHYILTALA 2477
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 44/96 (45%), Gaps = 23/96 (23%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P VR+ + TPVG+ IF + A D D G G V Y P
Sbjct: 136 PYSVRIPENTPVGTPIFI-VNATDPDLGAGGSVLYSFQPPS------------------- 175
Query: 75 GYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+F+I+ +G VTV + LD+E TQ Y +T+ A+
Sbjct: 176 --PFFAID-SARGIVTVIQELDYEVTQAYQLTVNAT 208
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 21/99 (21%)
Query: 12 RTIPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVT 71
R +P + + + TP G ++++ + A+D D G+NGLV Y + VG R+
Sbjct: 891 RNLPFVAEILEGTPAGVSVYQ-VVAIDLDEGLNGLVSYRM------------QVGMPRMD 937
Query: 72 VVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F IN G VT LD E+ Y + +VAS
Sbjct: 938 -------FVIN-STSGVVTTTAELDRERIAEYQLRVVAS 968
>gi|157649918|gb|ABV59343.1| protocadherin mu4 [Callorhinchus milii]
Length = 964
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 18/85 (21%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
PVG+ + K L A D D G NG + Y + GKDRV + F+++ P
Sbjct: 255 PVGTLVIK-LNATDLDDGSNGDIVY-----------SFSNYGKDRVREL-----FNVD-P 296
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVA 109
H G++ V LDFE+ Y + + A
Sbjct: 297 HTGEIRVKGKLDFEEANVYEINVEA 321
>gi|167538373|ref|XP_001750851.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163770672|gb|EDQ84355.1| predicted protein [Monosiga brevicollis MX1]
Length = 10056
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 22/93 (23%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V V + +G TI + L A D DAG NG V Y ++P D +
Sbjct: 7459 VAVPENEAIGETI-EQLVAFDPDAGANGTVSYSLLP--------------------DNLT 7497
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
FSI+ G++ VN SLD+E Q + T+ A+
Sbjct: 7498 AFSIDA-TTGRLRVNASLDYETQQSFEFTVRAT 7529
>gi|12965351|gb|AAK07670.1| cadherin 23 [Mus musculus]
Length = 3322
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 23/84 (27%)
Query: 26 VGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPH 85
VG+ I + + A DAD+G L+EY ++VDG F+IN P+
Sbjct: 2420 VGTVILR-VTATDADSGNFALIEY---------------------SLVDGEGKFAIN-PN 2456
Query: 86 QGQVTVNRSLDFEKTQRYLVTIVA 109
G ++V SLD EK Y++T +A
Sbjct: 2457 TGDISVLSSLDREKKDHYILTALA 2480
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 44/96 (45%), Gaps = 23/96 (23%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P VR++ TPVG+ IF + A D D G G V Y P
Sbjct: 136 PYSVRITQNTPVGTPIFI-VNATDPDLGAGGSVLYSFQPPS------------------- 175
Query: 75 GYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+F+I+ +G VTV + LD+E TQ Y +T+ A+
Sbjct: 176 --PFFAID-SARGIVTVIQELDYEVTQAYQLTVNAT 208
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 21/99 (21%)
Query: 12 RTIPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVT 71
R +P + + + TP G ++++ + A+D D G+NGLV Y + VG R+
Sbjct: 894 RNLPFVAEILEGTPAGVSVYQ-VVAIDLDEGLNGLVSYRM------------QVGMPRMD 940
Query: 72 VVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F IN G VT LD E+ Y + +VAS
Sbjct: 941 -------FVIN-STSGVVTTTAELDRERIAEYQLRVVAS 971
>gi|60417434|emb|CAI59609.1| cadherin 23 [Mus musculus]
Length = 3283
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 23/84 (27%)
Query: 26 VGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPH 85
VG+ I + + A DAD+G L+EY ++VDG F+IN P+
Sbjct: 2415 VGTVILR-VTATDADSGNFALIEY---------------------SLVDGEGKFAIN-PN 2451
Query: 86 QGQVTVNRSLDFEKTQRYLVTIVA 109
G ++V SLD EK Y++T +A
Sbjct: 2452 TGDISVLSSLDREKKDHYILTALA 2475
Score = 37.7 bits (86), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 44/96 (45%), Gaps = 23/96 (23%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P VR+ + TPVG+ IF + A D D G G V Y P
Sbjct: 136 PYSVRIPENTPVGTPIFI-VNATDPDLGAGGSVLYSFQPPS------------------- 175
Query: 75 GYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+F+I+ +G VTV + LD+E TQ Y +T+ A+
Sbjct: 176 --PFFAID-SARGIVTVIQELDYEVTQAYQLTVNAT 208
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 21/99 (21%)
Query: 12 RTIPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVT 71
R +P + + + TP G ++++ + A+D D G+NGLV Y + VG R+
Sbjct: 889 RNLPFVAEILEGTPAGVSVYQ-VVAIDLDEGLNGLVSYRM------------QVGMPRMD 935
Query: 72 VVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F IN G VT LD E+ Y + +VAS
Sbjct: 936 -------FVIN-STSGVVTTTAELDRERIAEYQLRVVAS 966
>gi|60417436|emb|CAI59610.1| cadherin 23 [Mus musculus]
Length = 3267
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 23/84 (27%)
Query: 26 VGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPH 85
VG+ I + + A DAD+G L+EY ++VDG F+IN P+
Sbjct: 2415 VGTVILR-VTATDADSGNFALIEY---------------------SLVDGEGKFAIN-PN 2451
Query: 86 QGQVTVNRSLDFEKTQRYLVTIVA 109
G ++V SLD EK Y++T +A
Sbjct: 2452 TGDISVLSSLDREKKDHYILTALA 2475
Score = 37.7 bits (86), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 44/96 (45%), Gaps = 23/96 (23%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P VR+ + TPVG+ IF + A D D G G V Y P
Sbjct: 136 PYSVRIPENTPVGTPIFI-VNATDPDLGAGGSVLYSFQPPS------------------- 175
Query: 75 GYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+F+I+ +G VTV + LD+E TQ Y +T+ A+
Sbjct: 176 --PFFAID-SARGIVTVIQELDYEVTQAYQLTVNAT 208
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 21/99 (21%)
Query: 12 RTIPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVT 71
R +P + + + TP G ++++ + A+D D G+NGLV Y + VG R+
Sbjct: 889 RNLPFVAEILEGTPAGVSVYQ-VVAIDLDEGLNGLVSYRM------------QVGMPRMD 935
Query: 72 VVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F IN G VT LD E+ Y + +VAS
Sbjct: 936 -------FVIN-STSGVVTTTAELDRERIAEYQLRVVAS 966
>gi|334313644|ref|XP_001380300.2| PREDICTED: cadherin-23-like, partial [Monodelphis domestica]
Length = 401
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 44/97 (45%), Gaps = 25/97 (25%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEY-FIVPSQDKNIGTADGVGKDRVTVV 73
P VR+ + TPVG+ IF + A D D G G V Y F PS+ I +A G+
Sbjct: 286 PYSVRIPENTPVGTPIFI-VNATDPDLGAGGSVLYSFQPPSEFFAIDSARGI-------- 336
Query: 74 DGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
VTV R LD+E TQ Y + + A+
Sbjct: 337 ---------------VTVIRELDYEVTQAYQLVVNAT 358
>gi|348508820|ref|XP_003441951.1| PREDICTED: cadherin-related family member 1-like [Oreochromis
niloticus]
Length = 862
Score = 38.5 bits (88), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 24/100 (24%)
Query: 12 RTIPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVT 71
+ +P I+ + + T GS+I++ ++AVD D G G V Y++ S
Sbjct: 138 QNLPFIIDIPEDTAPGSSIYR-VQAVDKDMGSGGSVSYYLQTSP---------------- 180
Query: 72 VVDGYSYFSINLPHQG--QVTVNRSLDFEKTQRYLVTIVA 109
++ F+I+ H G +V + +LDFE T + VT+VA
Sbjct: 181 ----FTKFTIDG-HSGILRVKLGETLDFETTPTHFVTVVA 215
>gi|344265590|ref|XP_003404866.1| PREDICTED: protocadherin gamma-B6-like [Loxodonta africana]
Length = 871
Score = 38.5 bits (88), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 19/92 (20%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
+ +S+ P G+++F+ + A D D G+N + Y+ R T
Sbjct: 249 ISLSENLPPGTSVFR-VSATDQDEGINAEISYYF-----------------RSTTQSTRH 290
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
FS++ G VT N+SLDFE RY++ + A
Sbjct: 291 MFSVD-EKTGVVTNNQSLDFEDVARYIMEVEA 321
>gi|440892176|gb|ELR45491.1| Protocadherin gamma-C3, partial [Bos grunniens mutus]
Length = 817
Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 15/72 (20%)
Query: 30 IFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQV 89
+ +L A D D+G+N L+ Y ++ +++++ + S+ S+N P G V
Sbjct: 573 LLCSLAASDPDSGLNALISYSLLEPRNRDVSAS--------------SFISLN-PQTGAV 617
Query: 90 TVNRSLDFEKTQ 101
RS D+E+TQ
Sbjct: 618 HATRSFDYEQTQ 629
>gi|345496415|ref|XP_001602469.2| PREDICTED: protocadherin-like wing polarity protein stan-like
[Nasonia vitripennis]
Length = 3216
Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 45/91 (49%), Gaps = 12/91 (13%)
Query: 20 VSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYF 79
V + P+GS++ +++A D D G N VEY IV + T+ + S F
Sbjct: 382 VHESVPIGSSVI-SIKATDQDMGKNSEVEYSIVSTTGGGT----------TTLTEDQSTF 430
Query: 80 SINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
I+ P G VT SLD EKT+ Y V I AS
Sbjct: 431 RID-PRTGIVTTKTSLDREKTEVYTVIIQAS 460
>gi|209489409|gb|ACI49172.1| hypothetical protein Csp3_JD01.004 [Caenorhabditis angaria]
Length = 4291
Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 12 RTIPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFI 51
+ P I+ VS+ P+G TI LRA D D G NG V Y I
Sbjct: 574 ESFPEILEVSEDAPIG-TIIAKLRATDEDTGYNGFVRYVI 612
>gi|391338304|ref|XP_003743499.1| PREDICTED: LOW QUALITY PROTEIN: cadherin-related tumor
suppressor-like [Metaseiulus occidentalis]
Length = 4957
Score = 38.5 bits (88), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 52/114 (45%), Gaps = 30/114 (26%)
Query: 1 LTCTVKVSNRKRTIPVI------VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPS 54
+T T++++ + P + V++ PVG+ + ++A D D GVNG + + I
Sbjct: 3085 VTVTIRITQENKNAPSFSSASYQISVAENEPVGNELL-TIQASDPDEGVNGQLAFSI--- 3140
Query: 55 QDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIV 108
A+G F+I+ H G VT+N SLDFE Q Y + +
Sbjct: 3141 ------EANG-------------NFAID-KHSGIVTLNESLDFETAQGYSLKVA 3174
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 38/86 (44%), Gaps = 21/86 (24%)
Query: 24 TPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINL 83
TP G I ++RA DAD G NG V Y ++ G FS+N
Sbjct: 1857 TPRGHKI-GSVRATDADIGQNGQVSYSVLSDW-------------------GNDLFSLN- 1895
Query: 84 PHQGQVTVNRSLDFEKTQRYLVTIVA 109
P G T+ +LD+E+ Q Y+ + A
Sbjct: 1896 PQTGVFTLTSNLDYEQYQHYIFVVSA 1921
>gi|262263247|tpg|DAA06624.1| TPA_inf: protocadherin gamma b22 isoform [Anolis carolinensis]
Length = 938
Score = 38.5 bits (88), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 19/92 (20%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V + + P+GS + + + A+D D GVN +EY +I T
Sbjct: 249 VSIVESVPIGSLLLQ-VSALDKDDGVNAQIEYHF-----SSISTT------------AQQ 290
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
F ++ PH G++ + +LDFE+T Y +++ A
Sbjct: 291 KFRLD-PHSGKIAIKENLDFEETDAYTMSVEA 321
>gi|441596423|ref|XP_004092928.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin beta-8 [Nomascus
leucogenys]
Length = 804
Score = 38.5 bits (88), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 19/92 (20%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V++S+ +PVG + K + A D D GVNG + Y + + D+ T
Sbjct: 250 VQISEDSPVGFLVVK-VSATDVDTGVNGEISYSLFQASDEISKT---------------- 292
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
F+++ G++ + + LDFEK Q Y V I A
Sbjct: 293 -FNVDF-LTGEIRLKKQLDFEKLQSYEVNIEA 322
>gi|326673545|ref|XP_683010.4| PREDICTED: protocadherin-12 [Danio rerio]
Length = 1153
Score = 38.5 bits (88), Expect = 0.56, Method: Composition-based stats.
Identities = 31/95 (32%), Positives = 45/95 (47%), Gaps = 18/95 (18%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P ++ +++ T G TI NLRA D D G NG VEY + + + ++
Sbjct: 224 PSVIELAENTIRG-TIVLNLRATDPDQGANGEVEYSL----------------SKHSPLE 266
Query: 75 GYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
FSI+ P G +T+ LDFE+ Y V I A
Sbjct: 267 VQRLFSIH-PKTGALTLQGPLDFEEKNVYEVDIQA 300
Score = 35.0 bits (79), Expect = 6.0, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 16/79 (20%)
Query: 31 FKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVT 90
F + A D D G++G V + I S + TA +FS++ P G+VT
Sbjct: 458 FLTVEAHDVDLGLSGQVSFSIRESNELGTPTA---------------FFSVH-PSSGEVT 501
Query: 91 VNRSLDFEKTQRYLVTIVA 109
V +SLD+E+++ Y + A
Sbjct: 502 VQQSLDYEESRVYSFIVEA 520
>gi|25453400|ref|NP_037059.1| cadherin-6 precursor [Rattus norvegicus]
gi|1705546|sp|P55280.1|CADH6_RAT RecName: Full=Cadherin-6; AltName: Full=Kidney cadherin;
Short=K-cadherin; Flags: Precursor
gi|435461|dbj|BAA04975.1| K-cadherin [Rattus norvegicus]
Length = 789
Score = 38.5 bits (88), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 17/92 (18%)
Query: 19 RVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSY 78
+ + +P G+ I + ++A DAD G N +EY I DG G D V+
Sbjct: 276 KTPESSPPGTPIGR-IKASDADVGENAEIEYSIT----------DGEGHDMFDVI----- 319
Query: 79 FSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ +G +TV + LDFEK + Y + + AS
Sbjct: 320 -TDQETQEGIITVKKLLDFEKKRVYTLKVEAS 350
>gi|449267275|gb|EMC78241.1| Protocadherin Fat 4, partial [Columba livia]
Length = 3610
Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 19/92 (20%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
VRV + PVGST+ + A DAD GVNG V+Y + +K
Sbjct: 1681 VRVPEDVPVGSTLV-TVTATDADDGVNGHVKYSLKKITEK-----------------ASQ 1722
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
F ++ +G +T+ RSLDFE+ Y + + A
Sbjct: 1723 IFQLDA-EKGAITLVRSLDFEEGDSYELEVQA 1753
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 19/92 (20%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
VRV + PVGST+ + A D DAG+NG V+Y + ++T +
Sbjct: 822 VRVPEDVPVGSTLVTVI-ATDPDAGLNGHVKYSL----------------KKITEI-ASQ 863
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
F ++ G +T+ RSLDFE+ Y V + A
Sbjct: 864 IFQLD-SETGAITLVRSLDFEEGDTYEVEVQA 894
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 19/92 (20%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
VRV + PVGSTI + A DAD G+NG ++Y + + D
Sbjct: 2327 VRVPEDVPVGSTIVI-VTATDADEGLNGCIKYSLKKATDL-----------------ASE 2368
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
F +++ G + + RSLDFE+ Y + + A
Sbjct: 2369 IFHLDV-ETGAIALVRSLDFEEGDTYEMDVQA 2399
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 19/92 (20%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
VRV + PVGST+ + A D D G+NG V+Y + + D +
Sbjct: 503 VRVPEDVPVGSTLVI-VTATDPDEGLNGYVKYSLKKAMDLS-----------------SE 544
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
F +++ G +T+ RSLDFE+ Y + + A
Sbjct: 545 IFHLDV-ETGAITLVRSLDFEEGDSYEMDVQA 575
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 19/90 (21%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
VRV + PVGST+ + A DAD G NG ++Y + + D +
Sbjct: 175 VRVPEDVPVGSTLV-TVTATDADEGPNGHLKYSLKKATDMAL-----------------D 216
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTI 107
F ++ G +T+ RSLD+EK Y + +
Sbjct: 217 IFRLDA-ETGAITLVRSLDYEKDDSYEMEV 245
>gi|262263236|tpg|DAA06613.1| TPA_inf: protocadherin gamma b11 isoform [Anolis carolinensis]
Length = 936
Score = 38.5 bits (88), Expect = 0.57, Method: Composition-based stats.
Identities = 28/93 (30%), Positives = 49/93 (52%), Gaps = 19/93 (20%)
Query: 17 IVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGY 76
+V + + TP GS + + ++A D DAG NG + Y +NI +RV
Sbjct: 249 MVNLKENTPRGSLVVQ-MKATDKDAGSNGQITYNF-----RNI-------PERVN----- 290
Query: 77 SYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
FS++ G++ + +LDFE++++YLV + A
Sbjct: 291 QKFSLD-SKNGKIMIKEALDFEESEKYLVAVEA 322
>gi|242024858|ref|XP_002432843.1| Cadherin-23 precursor, putative [Pediculus humanus corporis]
gi|212518352|gb|EEB20105.1| Cadherin-23 precursor, putative [Pediculus humanus corporis]
Length = 2799
Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 11/91 (12%)
Query: 20 VSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQ-DKNIGTADGVGKDRVTVVDGYSY 78
V++ PVG+++F RAVDAD G+ G + Y I+ + + G+ D G ++ VD
Sbjct: 2099 VAENEPVGTSVFT-ARAVDADKGIFGKLNYSILSAATSTDSGSTDSEGSWKLFKVDS--- 2154
Query: 79 FSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
+ G V+ N D+E RY + A
Sbjct: 2155 ------NTGVVSTNSVFDYENKNRYAFILHA 2179
Score = 35.0 bits (79), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 18/94 (19%)
Query: 17 IVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGY 76
+V V + P G+ + K ++A+D D G N + Y I+ +D DGY
Sbjct: 644 VVSVREEQPGGTEVTK-IKAIDKDKGKNSTITYSILKGRDS----------------DGY 686
Query: 77 SYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F+I+ P G + +LD E+ Y + + A+
Sbjct: 687 DLFTID-PITGSIRTRTTLDHEERSIYRLAVAAT 719
>gi|297300998|ref|XP_001086534.2| PREDICTED: cadherin-related family member 1 [Macaca mulatta]
Length = 897
Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 25/97 (25%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P + V + P GS+IFK + AVD D G G V YF+ +N+
Sbjct: 139 PYVALVPEDIPAGSSIFK-VHAVDRDTGSGGSVTYFL-----QNL--------------- 177
Query: 75 GYSYFSINLPHQG--QVTVNRSLDFEKTQRYLVTIVA 109
+S F+++ H G ++ +LD+E+++ + VT+VA
Sbjct: 178 -HSPFAVDR-HSGVLRLQAGATLDYERSRTHYVTVVA 212
>gi|170031843|ref|XP_001843793.1| cadherin [Culex quinquefasciatus]
gi|167871192|gb|EDS34575.1| cadherin [Culex quinquefasciatus]
Length = 2888
Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 19/96 (19%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P+ V +S+ +PVG+ +F N A D+D+G N ++Y N+ K+
Sbjct: 899 PINVYISEDSPVGAIVF-NFTATDSDSGTNAELKY--------NLSKPATPQKE------ 943
Query: 75 GYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
YFSI+ G +T+ LD+E+T+ +L+ + A+
Sbjct: 944 ---YFSID-SLTGSLTLLAPLDYEETKEFLLIVQAT 975
Score = 38.1 bits (87), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 18/94 (19%)
Query: 17 IVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGY 76
+V V + P+G+ + + +RA+D D G N + Y I+ +D DGY
Sbjct: 676 VVSVREEQPIGTEVVR-VRAIDRDNGANASITYSILKGRDS----------------DGY 718
Query: 77 SYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
FSI+ P G + SLD E+ Y + + A+
Sbjct: 719 GMFSID-PISGVLRTKVSLDHEEKTIYRLAVAAT 751
Score = 34.3 bits (77), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 53/116 (45%), Gaps = 13/116 (11%)
Query: 1 LTCTVKVSNRKRTIPVI------VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPS 54
LT V+V + P+ ++V + TP S I + + AVDAD G N + Y I+
Sbjct: 431 LTIMVEVQDVNDNPPIFEKTEYSIKVIESTPSNSQIVQ-VTAVDADTGNNARLTYRIL-G 488
Query: 55 QDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
D+ + D V D + F P+ G + + LD E +RY +T++ S
Sbjct: 489 DDQRQRSGKSTSSDE-HVPDIFGIF----PNSGWIYLRTKLDRELQERYNITVIVS 539
>gi|345328648|ref|XP_003431289.1| PREDICTED: protocadherin gamma-A10-like [Ornithorhynchus anatinus]
Length = 870
Score = 38.1 bits (87), Expect = 0.59, Method: Composition-based stats.
Identities = 33/111 (29%), Positives = 49/111 (44%), Gaps = 25/111 (22%)
Query: 5 VKVSNRKRTIPVIVR------VSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKN 58
VKV + P+ R V + P GS + + ++A D D G N LV Y +V DK+
Sbjct: 230 VKVLDANDNAPIFDRTLYQGKVREDIPTGSPVVR-VKATDKDEGSNSLVTYSLVKLSDKD 288
Query: 59 IGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
G + V+D P G++ V +LDFE + Y + I A
Sbjct: 289 SG---------LFVMD---------PQSGEIKVEGNLDFEAMEFYELEIQA 321
>gi|149027277|gb|EDL82944.1| rCG23692 [Rattus norvegicus]
Length = 790
Score = 38.1 bits (87), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 17/92 (18%)
Query: 19 RVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSY 78
+ + +P G+ I + ++A DAD G N +EY I DG G D V+
Sbjct: 276 KTPESSPPGTPIGR-IKASDADVGENAEIEYSIT----------DGEGHDMFDVI----- 319
Query: 79 FSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ +G +TV + LDFEK + Y + + AS
Sbjct: 320 -TDQETQEGIITVKKLLDFEKKRVYTLKVEAS 350
>gi|403255752|ref|XP_003920575.1| PREDICTED: protocadherin gamma-B1 [Saimiri boliviensis boliviensis]
Length = 812
Score = 38.1 bits (87), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 19/92 (20%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V + + P G+++ + L A D D G+N + Y + S I T+
Sbjct: 247 VSLQENVPWGTSVLRVL-ATDQDEGINAEITYAFLNSP---ISTS--------------L 288
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
+F++N P+ G +T N +LDFE+T RY++ + A
Sbjct: 289 FFNLN-PNTGDITTNGTLDFEETNRYVLGVEA 319
>gi|270006423|gb|EFA02871.1| cadherin-like protein [Tribolium castaneum]
Length = 3284
Score = 38.1 bits (87), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 51/115 (44%), Gaps = 27/115 (23%)
Query: 1 LTCTVKVSNRKRTIPVIVRVS------DLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPS 54
+T T+ V+ + +PV +S + P+GSTI + A D D G NG++ Y I
Sbjct: 1396 VTVTLVVTGENKYMPVFTALSYQVIVPENEPLGSTIL-TVNASDDDQGPNGMIRYKI--- 1451
Query: 55 QDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
G + + VD YS G VT+ + LD++ Q Y + I A
Sbjct: 1452 --------SGGNERKEFAVDPYS---------GAVTILQPLDYDTIQEYHLNITA 1489
>gi|344272208|ref|XP_003407927.1| PREDICTED: LOW QUALITY PROTEIN: cadherin-10-like [Loxodonta
africana]
Length = 788
Score = 38.1 bits (87), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 17/95 (17%)
Query: 16 VIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
+ +RV + +PV + I N++A DAD G N VEY I+ DG G D ++
Sbjct: 274 IHLRVLESSPVXTAI-GNVKATDADTGKNAEVEYRII----------DGDGTDMFDII-- 320
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ +G +TV + LD+E + Y + + A
Sbjct: 321 ----TEKDTQEGIITVKKPLDYESRRLYTLKVEAE 351
>gi|403256576|ref|XP_003920945.1| PREDICTED: protocadherin beta-8-like [Saimiri boliviensis
boliviensis]
Length = 1087
Score = 38.1 bits (87), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 19/92 (20%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V++S+ +P+G + K + A DAD GVNG + Y + + D+ + VD +
Sbjct: 743 VQISEDSPIGFLVIK-VSATDADTGVNGEISYSLFQASDE---------ISKTFKVDSLT 792
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
G++ + + LDFEK Y + I A
Sbjct: 793 ---------GEIRLEKQLDFEKLHSYEINIEA 815
>gi|347543907|gb|AEP02526.1| CDH23, partial [Myotis altarium]
Length = 3209
Score = 38.1 bits (87), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 44/96 (45%), Gaps = 23/96 (23%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P VR+ + TPVG+ IF + A D D G G V Y P
Sbjct: 128 PYSVRIPEDTPVGTPIFI-VNATDPDLGAGGSVLYSFQPPS------------------- 167
Query: 75 GYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+F+I+ +G VTV + LD+E TQ Y +T+ A+
Sbjct: 168 --PFFAID-SARGIVTVIQELDYETTQAYQLTVNAT 200
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 40/85 (47%), Gaps = 23/85 (27%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
PVG+ I + A DAD+G ++EY ++VDG F+IN P
Sbjct: 2406 PVGTVILT-VTASDADSGNFAVIEY---------------------SLVDGEGKFAIN-P 2442
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVA 109
G + V SLD EK Y++T +A
Sbjct: 2443 TTGDIYVLSSLDREKKDHYILTALA 2467
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 18/94 (19%)
Query: 17 IVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGY 76
IV + + P+ S +++ + A D D G+NG V Y + K G D +
Sbjct: 2609 IVHIKEEVPLRSNVYE-VYATDQDEGLNGAVRYSFL----KTTGNRD------------W 2651
Query: 77 SYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
YF+I+ P G + + LD EK Y + +VAS
Sbjct: 2652 EYFTID-PISGLIQTAQRLDREKQAVYSLILVAS 2684
Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 21/94 (22%)
Query: 14 IPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVV 73
+P+ V +S+ +PV S+ ++ A DAD+G N L+ + I ++R
Sbjct: 1844 LPMNVTISENSPV-SSFVAHILASDADSGCNALLTFNITAGN-----------RERA--- 1888
Query: 74 DGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTI 107
F+IN G VTVNR LD E+ Y +TI
Sbjct: 1889 -----FTINA-TSGIVTVNRPLDRERIPEYKLTI 1916
>gi|149640326|ref|XP_001510246.1| PREDICTED: protocadherin beta-14-like [Ornithorhynchus anatinus]
Length = 796
Score = 38.1 bits (87), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 44/93 (47%), Gaps = 19/93 (20%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V++S+ +P GS + + A D DAGVNG + Y ++ T
Sbjct: 249 VQISENSPEGSMV-STVTAQDFDAGVNGEISYTFFHVSEEIRKT---------------- 291
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F IN P G++ V LDFE TQ Y+V I A+
Sbjct: 292 -FEIN-PKSGEIRVTGKLDFEVTQLYVVDIQAT 322
>gi|148728175|ref|NP_444371.3| protocadherin beta 16 precursor [Mus musculus]
gi|13876292|gb|AAK26066.1| protocadherin beta 16 [Mus musculus]
gi|109733261|gb|AAI16626.1| Protocadherin beta 16 [Mus musculus]
gi|148678208|gb|EDL10155.1| mCG141291 [Mus musculus]
Length = 802
Score = 38.1 bits (87), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 43/92 (46%), Gaps = 19/92 (20%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
++ + +P+G I + A D D GVNG + Y + +D + K
Sbjct: 250 AQIPEDSPIGFLII-TVSATDKDIGVNGQISYSL-------FQVSDDISK---------- 291
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
FSI+ P G+V + LDFEKTQ Y + I A
Sbjct: 292 TFSIH-PLTGEVRLKEHLDFEKTQSYEINIEA 322
>gi|345307957|ref|XP_001508966.2| PREDICTED: protocadherin Fat 2 [Ornithorhynchus anatinus]
Length = 4144
Score = 38.1 bits (87), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 43/98 (43%), Gaps = 23/98 (23%)
Query: 12 RTIPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVT 71
+P V + T G +F+ + A D D G NG V Y G +D
Sbjct: 2066 ENLPYFTSVPEGTDPGDVVFQ-VSATDRDLGANGTVTY--------------GFAED--- 2107
Query: 72 VVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
Y YF I+ P+ G +++ + LD+ +YL+ ++A
Sbjct: 2108 ----YQYFRID-PYLGDISLRKPLDYRALNKYLLKVIA 2140
>gi|109732291|gb|AAI15721.1| Protocadherin beta 16 [Mus musculus]
Length = 802
Score = 38.1 bits (87), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 43/92 (46%), Gaps = 19/92 (20%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
++ + +P+G I + A D D GVNG + Y + +D + K
Sbjct: 250 AQIPEDSPIGFLII-TVSATDKDIGVNGQISYSL-------FQVSDDISK---------- 291
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
FSI+ P G+V + LDFEKTQ Y + I A
Sbjct: 292 TFSIH-PLTGEVRLKEHLDFEKTQSYEINIEA 322
>gi|157426849|ref|NP_001098715.1| protocadherin-19 isoform a precursor [Mus musculus]
gi|341942207|sp|Q80TF3.3|PCD19_MOUSE RecName: Full=Protocadherin-19; Flags: Precursor
Length = 1145
Score = 38.1 bits (87), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 15/74 (20%)
Query: 36 AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSL 95
A D D G+NG V Y IVPSQ +++ ++Y SIN P+ G + RS
Sbjct: 477 ARDPDMGLNGSVSYQIVPSQVRDMPV--------------FTYVSIN-PNSGDIYALRSF 521
Query: 96 DFEKTQRYLVTIVA 109
+ E+T+ + ++A
Sbjct: 522 NHEQTKAFEFKVLA 535
>gi|348501710|ref|XP_003438412.1| PREDICTED: protocadherin-15-like [Oreochromis niloticus]
Length = 2718
Score = 38.1 bits (87), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 44/97 (45%), Gaps = 19/97 (19%)
Query: 18 VRVSDLTPVGSTIFK----NLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVV 73
V V++LTP G+TIF N A D D G NG +EY I+ +D V V
Sbjct: 130 VAVNELTPPGTTIFTGFSGNNGATDIDDGPNGHIEYSIL------YNPSDPASNRTVAVS 183
Query: 74 DGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ S G + + L++E RYLV + A+
Sbjct: 184 NSLS---------GSIILAERLNYEDRTRYLVLVQAN 211
>gi|291223058|ref|XP_002731529.1| PREDICTED: fat-like [Saccoglossus kowalevskii]
Length = 4968
Score = 38.1 bits (87), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 21/91 (23%)
Query: 20 VSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYF 79
VS+ +G+++ + + A+D D G NG V Y I+ + G+DR ++ D YS
Sbjct: 1835 VSESETIGTSVGE-VIAIDPDEGSNGNVTYSIL----------EDWGQDRFSL-DSYS-- 1880
Query: 80 SINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
G T+++ LDFE+ Q YL+ + AS
Sbjct: 1881 -------GIFTLDKKLDFEEVQYYLIVVEAS 1904
>gi|355691685|gb|EHH26870.1| hypothetical protein EGK_16946 [Macaca mulatta]
Length = 801
Score = 38.1 bits (87), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 19/92 (20%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V++S+ +P+G + K + A D D GVNG + Y + + D+ + VD +
Sbjct: 250 VQISEDSPIGFLVVK-VSATDVDTGVNGEISYSLFQASDE---------ISKTFKVDSLT 299
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
G++ + + LDFEK Q Y V I A
Sbjct: 300 ---------GEIELKKQLDFEKLQSYEVNIEA 322
>gi|240975980|ref|XP_002402241.1| protocadherin-16, putative [Ixodes scapularis]
gi|215491130|gb|EEC00771.1| protocadherin-16, putative [Ixodes scapularis]
Length = 2493
Score = 38.1 bits (87), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 21/91 (23%)
Query: 20 VSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYF 79
V + +P+G+T+F RA+DAD G+ G + Y + A+G G+D+ F
Sbjct: 2024 VEESSPIGTTVF-TARAMDADRGLYGKLNYTM----------AEGEGRDK---------F 2063
Query: 80 SINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
I+ G +T D+E RY TI+A+
Sbjct: 2064 RIDR-DTGVITTEVVFDYESKNRYYFTILAT 2093
>gi|402872877|ref|XP_003900321.1| PREDICTED: protocadherin beta-13, partial [Papio anubis]
Length = 603
Score = 38.1 bits (87), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 19/92 (20%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V++S+ +P+G + K + A D D GVNG + Y + + D+ + VD +
Sbjct: 55 VQISEDSPIGFLVVK-VSATDVDTGVNGEISYSLFQASDE---------ISKTFKVDSLT 104
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
G++ + + LDFEK Q Y V I A
Sbjct: 105 ---------GEIELKKQLDFEKLQSYEVNIEA 127
>gi|363745760|ref|XP_428051.3| PREDICTED: protocadherin beta-4 [Gallus gallus]
Length = 811
Score = 38.1 bits (87), Expect = 0.68, Method: Composition-based stats.
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 19/92 (20%)
Query: 19 RVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSY 78
RV + P S + + + A+DAD G+NG V Y I+ S V +S
Sbjct: 244 RVVENAPERSLVLR-VMAMDADVGINGDVSYQIIQS-----------------VGQSHSA 285
Query: 79 FSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F+IN G++ V LDFE +Q++ +++ A+
Sbjct: 286 FAIN-STNGEILVREPLDFEASQKHELSVRAT 316
>gi|395508999|ref|XP_003758794.1| PREDICTED: cadherin-23-like, partial [Sarcophilus harrisii]
Length = 3356
Score = 38.1 bits (87), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 44/96 (45%), Gaps = 23/96 (23%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P VR+ + TPVG+ IF + A D D G G V Y P +
Sbjct: 137 PYSVRIPENTPVGTPIFI-VNATDPDLGAGGSVLYSFQPPSE------------------ 177
Query: 75 GYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+F+I+ +G VTV R LD+E TQ Y + + A+
Sbjct: 178 ---FFAID-SARGIVTVIRELDYEVTQAYQLVVNAT 209
Score = 34.3 bits (77), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 38/85 (44%), Gaps = 23/85 (27%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
PVG TI + A DAD+G L+EY + DG GK F IN P
Sbjct: 2417 PVG-TIILTVTATDADSGPFALIEYSL----------GDGEGK-----------FGIN-P 2453
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVA 109
G + V SLD E Y++T +A
Sbjct: 2454 TTGDIYVLSSLDREMKAHYILTALA 2478
>gi|332234757|ref|XP_003266570.1| PREDICTED: protocadherin gamma-B3 [Nomascus leucogenys]
Length = 814
Score = 38.1 bits (87), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 26/116 (22%)
Query: 2 TCTVKVSNRKRTIPVI------VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPS- 54
T T+ + + +PV V V++ P G++I ++ A D D G NGLV Y+IV S
Sbjct: 437 TITLHILDVNDNVPVFHQASYTVHVAENNPPGASI-AHVSASDPDLGPNGLVSYYIVASD 495
Query: 55 -QDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
Q + + SY S+N G V R+LD E+ + + +T+ A
Sbjct: 496 LQPRELS----------------SYVSVNA-QSGVVFAQRALDHEQLRAFELTLQA 534
>gi|332234728|ref|XP_003266556.1| PREDICTED: protocadherin beta-13-like [Nomascus leucogenys]
Length = 801
Score = 38.1 bits (87), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 19/92 (20%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V++S+ +PVG + K + A D D GVNG + Y + + D+ T
Sbjct: 250 VQISEDSPVGFLVVK-VSATDVDTGVNGEISYSLFQASDEISKT---------------- 292
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
F ++ G++ + + LDFEK Q Y V I A
Sbjct: 293 -FKVDF-LTGEIRLKKQLDFEKLQSYEVNIEA 322
>gi|157426851|ref|NP_001098716.1| protocadherin-19 isoform b precursor [Mus musculus]
Length = 1097
Score = 38.1 bits (87), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 15/74 (20%)
Query: 36 AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSL 95
A D D G+NG V Y IVPSQ +++ ++Y SIN P+ G + RS
Sbjct: 477 ARDPDMGLNGSVSYQIVPSQVRDMPV--------------FTYVSIN-PNSGDIYALRSF 521
Query: 96 DFEKTQRYLVTIVA 109
+ E+T+ + ++A
Sbjct: 522 NHEQTKAFEFKVLA 535
>gi|148688470|gb|EDL20417.1| mCG11037, isoform CRA_a [Mus musculus]
Length = 1098
Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 15/74 (20%)
Query: 36 AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSL 95
A D D G+NG V Y IVPSQ +++ ++Y SIN P+ G + RS
Sbjct: 477 ARDPDMGLNGSVSYQIVPSQVRDMPV--------------FTYVSIN-PNSGDIYALRSF 521
Query: 96 DFEKTQRYLVTIVA 109
+ E+T+ + ++A
Sbjct: 522 NHEQTKAFEFKVLA 535
>gi|109079045|ref|XP_001091651.1| PREDICTED: protocadherin beta-13-like isoform 1 [Macaca mulatta]
Length = 798
Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 19/92 (20%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V++S+ +P+G + K + A D D GVNG + Y + + D+ + VD +
Sbjct: 250 VQISEDSPIGFLVVK-VSATDVDTGVNGEISYSLFQASDE---------ISKTFKVDSLT 299
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
G++ + + LDFEK Q Y V I A
Sbjct: 300 ---------GEIELKKQLDFEKLQSYEVNIEA 322
>gi|395546174|ref|XP_003774966.1| PREDICTED: protocadherin-19 [Sarcophilus harrisii]
Length = 968
Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 15/74 (20%)
Query: 36 AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSL 95
A D D G+NG V Y IVPSQ +++ ++Y SIN P+ G + RS
Sbjct: 469 ARDPDLGLNGSVSYQIVPSQVRDMPV--------------FTYVSIN-PNSGDIYALRSF 513
Query: 96 DFEKTQRYLVTIVA 109
+ E+T+ + ++A
Sbjct: 514 NHEQTKAFEFKVLA 527
>gi|354474923|ref|XP_003499679.1| PREDICTED: protocadherin-19-like [Cricetulus griseus]
Length = 1304
Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 15/74 (20%)
Query: 36 AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSL 95
A D D G+NG V Y IVPSQ +++ ++Y SIN P+ G + RS
Sbjct: 636 ARDPDLGLNGSVSYQIVPSQVRDMPV--------------FTYVSIN-PNSGDIYALRSF 680
Query: 96 DFEKTQRYLVTIVA 109
+ E+T+ + ++A
Sbjct: 681 NHEQTKAFEFKVLA 694
>gi|332861180|ref|XP_003317603.1| PREDICTED: protocadherin-19 [Pan troglodytes]
Length = 1139
Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 15/74 (20%)
Query: 36 AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSL 95
A D D G+NG V Y IVPSQ +++ ++Y SIN P+ G + RS
Sbjct: 477 ARDPDLGLNGSVSYQIVPSQVRDMPV--------------FTYVSIN-PNSGDIYALRSF 521
Query: 96 DFEKTQRYLVTIVA 109
+ E+T+ + ++A
Sbjct: 522 NHEQTKAFEFKVLA 535
>gi|28972716|dbj|BAC65774.1| mKIAA1313 protein [Mus musculus]
gi|148688471|gb|EDL20418.1| mCG11037, isoform CRA_b [Mus musculus]
Length = 969
Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 15/74 (20%)
Query: 36 AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSL 95
A D D G+NG V Y IVPSQ +++ ++Y SIN P+ G + RS
Sbjct: 301 ARDPDMGLNGSVSYQIVPSQVRDMPV--------------FTYVSIN-PNSGDIYALRSF 345
Query: 96 DFEKTQRYLVTIVA 109
+ E+T+ + ++A
Sbjct: 346 NHEQTKAFEFKVLA 359
>gi|148692950|gb|EDL24897.1| protocadherin 21 [Mus musculus]
Length = 891
Score = 38.1 bits (87), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 24/97 (24%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P I+RV + P GS+IFK ++A D D G G V Y + +N+ +
Sbjct: 171 PYIIRVPENIPAGSSIFK-VQAEDKDTGSGGSVTYSL-----QNLHS------------- 211
Query: 75 GYSYFSINLPHQG--QVTVNRSLDFEKTQRYLVTIVA 109
S FS++ H G ++ +LD+EK++ + +T++A
Sbjct: 212 --SKFSMDR-HSGVLRLQAGATLDYEKSRAHYITVIA 245
>gi|410895435|ref|XP_003961205.1| PREDICTED: cadherin-related family member 1-like [Takifugu
rubripes]
Length = 862
Score = 38.1 bits (87), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 24/100 (24%)
Query: 12 RTIPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVT 71
+ +P IV VS+ S+I++ ++AVD D G G V Y + PS
Sbjct: 138 QNLPFIVDVSEDAAAESSIYR-VQAVDKDMGSGGSVSYILQPSP---------------- 180
Query: 72 VVDGYSYFSINLPHQG--QVTVNRSLDFEKTQRYLVTIVA 109
+S F+I+ H G ++ +LD+E T + VT+VA
Sbjct: 181 ----FSKFTID-GHSGILRIKPGETLDYETTPTHFVTVVA 215
>gi|302564429|ref|NP_001181814.1| protocadherin beta-13 precursor [Macaca mulatta]
Length = 753
Score = 38.1 bits (87), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 19/92 (20%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V++S+ +P+G + K + A D D GVNG + Y + + D+ + VD +
Sbjct: 250 VQISEDSPIGFLVVK-VSATDVDTGVNGEISYSLFQASDE---------ISKTFKVDSLT 299
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
G++ + + LDFEK Q Y V I A
Sbjct: 300 ---------GEIELKKQLDFEKLQSYEVNIEA 322
>gi|355704978|gb|EHH30903.1| Protocadherin-19, partial [Macaca mulatta]
Length = 1061
Score = 38.1 bits (87), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 15/74 (20%)
Query: 36 AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSL 95
A D D G+NG V Y IVPSQ +++ ++Y SIN P+ G + RS
Sbjct: 467 ARDPDLGLNGSVSYQIVPSQVRDMPV--------------FTYVSIN-PNSGDIYALRSF 511
Query: 96 DFEKTQRYLVTIVA 109
+ E+T+ + ++A
Sbjct: 512 NHEQTKAFEFKVLA 525
>gi|297676249|ref|XP_002816052.1| PREDICTED: protocadherin gamma-B1 [Pongo abelii]
Length = 810
Score = 38.1 bits (87), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 26/111 (23%)
Query: 5 VKVSNRKRTIPVI------VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKN 58
++V++ PV V + + P G+++ + + A D D G+N + Y + S
Sbjct: 227 IRVTDANDNAPVFSQEVYRVSLQENVPWGTSVLR-VMATDQDEGINAEITYAFLNSP--- 282
Query: 59 IGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
I T S F++N P+ G +T N +LDFE+T RY++ + A
Sbjct: 283 IST---------------SLFNLN-PNTGDITTNGTLDFEETSRYVLGVEA 317
>gi|302564845|ref|NP_001180833.1| protocadherin beta-8 precursor [Macaca mulatta]
Length = 801
Score = 38.1 bits (87), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 19/92 (20%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V++S+ +P+G + K + A D D GVNG + Y + + D+ + VD +
Sbjct: 250 VQISEDSPIGFLVVK-VSATDVDTGVNGEISYSLFQASDE---------ISKTFKVDSLT 299
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
G++ + + LDFEK Q Y V I A
Sbjct: 300 ---------GEIELKKQLDFEKLQSYEVNIEA 322
>gi|432952200|ref|XP_004085002.1| PREDICTED: protocadherin gamma-A11-like [Oryzias latipes]
Length = 799
Score = 38.1 bits (87), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 15/77 (19%)
Query: 33 NLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVN 92
+++A DAD G N V YF+ +D NI + +YFS+N G+V
Sbjct: 463 SVKAQDADYGNNARVSYFL---EDANING-----------MPASAYFSVNA-ESGEVVAV 507
Query: 93 RSLDFEKTQRYLVTIVA 109
RS D+E+T+ + + + A
Sbjct: 508 RSFDYEQTKEFHICVKA 524
>gi|426385038|ref|XP_004059045.1| PREDICTED: cadherin-6 [Gorilla gorilla gorilla]
Length = 790
Score = 38.1 bits (87), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 17/92 (18%)
Query: 19 RVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSY 78
+ + +P G+ I + ++A DAD G N +EY I DG G D VV
Sbjct: 276 KTPESSPPGTPIGR-IKASDADVGENAEIEYSIT----------DGEGLDMFDVV----- 319
Query: 79 FSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ +G +TV + LDFEK + Y + + AS
Sbjct: 320 -TDQETQEGIITVKKLLDFEKKKVYTLKVEAS 350
>gi|380802201|gb|AFE72976.1| protocadherin beta-8 precursor, partial [Macaca mulatta]
Length = 166
Score = 38.1 bits (87), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 19/92 (20%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V++S+ +P+G + K + A D D GVNG + Y + + D+ + VD +
Sbjct: 35 VQISEDSPIGFLVVK-VSATDVDTGVNGEISYSLFQASDE---------ISKTFKVDSLT 84
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
G++ + + LDFEK Q Y V I A
Sbjct: 85 ---------GEIELKKQLDFEKLQSYEVNIEA 107
>gi|110002501|gb|AAI18530.1| Pcdh19 protein [Mus musculus]
Length = 992
Score = 38.1 bits (87), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 15/74 (20%)
Query: 36 AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSL 95
A D D G+NG V Y IVPSQ +++ ++Y SIN P+ G + RS
Sbjct: 372 ARDPDMGLNGSVSYQIVPSQVRDMPV--------------FTYVSIN-PNSGDIYALRSF 416
Query: 96 DFEKTQRYLVTIVA 109
+ E+T+ + ++A
Sbjct: 417 NHEQTKAFEFKVLA 430
>gi|23503767|emb|CAD52120.1| novel protein similar to human procadherin 15 (PCDH15) [Danio
rerio]
gi|94732780|emb|CAK03588.1| novel protein similar to human procadherin 15 (PCDH15) [Danio
rerio]
Length = 623
Score = 38.1 bits (87), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 44/97 (45%), Gaps = 19/97 (19%)
Query: 18 VRVSDLTPVGSTIFK----NLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVV 73
V V++LTPVG+TIF N A D D G NG +EY I D + V +
Sbjct: 101 VSVNELTPVGTTIFTGFSGNNGATDIDDGPNGQIEYAI------QYNPNDPMSNRTVRIA 154
Query: 74 DGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
S G + + L++E+ RYL+ + A+
Sbjct: 155 GTLS---------GNIVLAERLNYEERTRYLIIVQAN 182
>gi|26006279|dbj|BAC41482.1| mKIAA1775 protein [Mus musculus]
Length = 856
Score = 38.1 bits (87), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 24/97 (24%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P I+RV + P GS+IFK ++A D D G G V Y + +N+ +
Sbjct: 138 PYIIRVPENIPAGSSIFK-VQAEDKDTGSGGSVTYSL-----QNLHS------------- 178
Query: 75 GYSYFSINLPHQG--QVTVNRSLDFEKTQRYLVTIVA 109
S FS++ H G ++ +LD+EK++ + +T++A
Sbjct: 179 --SKFSMDR-HSGVLRLQAGATLDYEKSRAHYITVIA 212
>gi|345807767|ref|XP_549133.2| PREDICTED: LOW QUALITY PROTEIN: protocadherin-19 [Canis lupus
familiaris]
Length = 1145
Score = 38.1 bits (87), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 15/74 (20%)
Query: 36 AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSL 95
A D D G+NG V Y IVPSQ +++ ++Y SIN P+ G + RS
Sbjct: 477 ARDPDLGLNGSVSYQIVPSQVRDMPV--------------FTYVSIN-PNSGDIYALRSF 521
Query: 96 DFEKTQRYLVTIVA 109
+ E+T+ + ++A
Sbjct: 522 NHEQTKAFEFKVLA 535
>gi|16716433|ref|NP_444363.1| protocadherin beta 8 precursor [Mus musculus]
gi|13876318|gb|AAK26079.1| protocadherin beta 8 [Mus musculus]
gi|117580256|gb|AAI27161.1| Protocadherin beta 8 [Mus musculus]
gi|148678216|gb|EDL10163.1| mCG141292 [Mus musculus]
Length = 779
Score = 38.1 bits (87), Expect = 0.74, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 15/70 (21%)
Query: 34 LRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNR 93
+ A D+D+G NGL+ Y ++P D+ +G A S SIN GQ+ R
Sbjct: 472 ISATDSDSGSNGLIIYSLLPPHDQQLGLA--------------SLISIN-SDNGQLFALR 516
Query: 94 SLDFEKTQRY 103
+LD+E Q +
Sbjct: 517 ALDYEALQAF 526
>gi|351711409|gb|EHB14328.1| Protocadherin-19 [Heterocephalus glaber]
Length = 1145
Score = 38.1 bits (87), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 15/74 (20%)
Query: 36 AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSL 95
A D D G+NG V Y IVPSQ +++ ++Y SIN P+ G + RS
Sbjct: 477 ARDPDLGLNGSVSYQIVPSQVRDMPV--------------FTYVSIN-PNSGDIYALRSF 521
Query: 96 DFEKTQRYLVTIVA 109
+ E+T+ + ++A
Sbjct: 522 NHEQTKAFEFKVLA 535
>gi|388454671|ref|NP_001252617.1| protocadherin-19 precursor [Macaca mulatta]
gi|387539728|gb|AFJ70491.1| protocadherin-19 isoform c precursor [Macaca mulatta]
Length = 1148
Score = 38.1 bits (87), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 15/74 (20%)
Query: 36 AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSL 95
A D D G+NG V Y IVPSQ +++ ++Y SIN P+ G + RS
Sbjct: 477 ARDPDLGLNGSVSYQIVPSQVRDMPV--------------FTYVSIN-PNSGDIYALRSF 521
Query: 96 DFEKTQRYLVTIVA 109
+ E+T+ + ++A
Sbjct: 522 NHEQTKAFEFKVLA 535
>gi|432106743|gb|ELK32395.1| Cadherin-23 [Myotis davidii]
Length = 500
Score = 38.1 bits (87), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 44/96 (45%), Gaps = 23/96 (23%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P VR+ + TPVG+ IF + A D D G G V Y P
Sbjct: 136 PYSVRIPEDTPVGTPIFI-VNATDPDLGAGGSVLYSFQPPS------------------- 175
Query: 75 GYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+F+I+ +G VTV + LD+E TQ Y +T+ A+
Sbjct: 176 --PFFAID-SARGIVTVIQELDYETTQAYQLTVNAT 208
>gi|395840235|ref|XP_003792969.1| PREDICTED: LOW QUALITY PROTEIN: cadherin-6 [Otolemur garnettii]
Length = 788
Score = 38.1 bits (87), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 17/92 (18%)
Query: 19 RVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSY 78
+ + +P G+ I + ++A DAD G N +EY I DG G D VV
Sbjct: 274 KTPESSPPGTPIGR-IKASDADVGENAEIEYSIT----------DGEGLDMFDVV----- 317
Query: 79 FSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ +G +TV + LDFEK + Y + + AS
Sbjct: 318 -TDQETQEGIITVKKLLDFEKKKVYTLKVEAS 348
>gi|390335673|ref|XP_003724198.1| PREDICTED: protocadherin Fat 4-like [Strongylocentrotus purpuratus]
Length = 1754
Score = 38.1 bits (87), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 21/93 (22%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V +++ P+G I N AVD D G NG+V+Y I+P+ D YS
Sbjct: 1371 VFITENNPLGLLII-NAFAVDDDVGANGVVDYSILPNFD-------------------YS 1410
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F+I+ P G +T+ S D E Y +T+VA+
Sbjct: 1411 DFTID-PVTGDITILVSADREIKDSYTLTVVAT 1442
>gi|355757529|gb|EHH61054.1| Protocadherin-19, partial [Macaca fascicularis]
Length = 1098
Score = 38.1 bits (87), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 15/74 (20%)
Query: 36 AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSL 95
A D D G+NG V Y IVPSQ +++ ++Y SIN P+ G + RS
Sbjct: 427 ARDPDLGLNGSVSYQIVPSQVRDMPV--------------FTYVSIN-PNSGDIYALRSF 471
Query: 96 DFEKTQRYLVTIVA 109
+ E+T+ + ++A
Sbjct: 472 NHEQTKAFEFKVLA 485
>gi|296235957|ref|XP_002763119.1| PREDICTED: protocadherin-19 isoform 2 [Callithrix jacchus]
Length = 1145
Score = 38.1 bits (87), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 15/74 (20%)
Query: 36 AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSL 95
A D D G+NG V Y IVPSQ +++ ++Y SIN P+ G + RS
Sbjct: 477 ARDPDLGLNGSVSYQIVPSQVRDMPV--------------FTYVSIN-PNSGDIYALRSF 521
Query: 96 DFEKTQRYLVTIVA 109
+ E+T+ + ++A
Sbjct: 522 NHEQTKAFEFKVLA 535
>gi|157742927|gb|AAI16269.1| Pcdhb8 protein [Mus musculus]
Length = 779
Score = 38.1 bits (87), Expect = 0.76, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 15/70 (21%)
Query: 34 LRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNR 93
+ A D+D+G NGL+ Y ++P D+ +G A S SIN GQ+ R
Sbjct: 472 ISATDSDSGSNGLIIYSLLPPHDQQLGLA--------------SLISIN-SDNGQLFALR 516
Query: 94 SLDFEKTQRY 103
+LD+E Q +
Sbjct: 517 ALDYEALQAF 526
>gi|426396635|ref|XP_004064537.1| PREDICTED: protocadherin-19 isoform 1 [Gorilla gorilla gorilla]
Length = 1148
Score = 38.1 bits (87), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 15/74 (20%)
Query: 36 AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSL 95
A D D G+NG V Y IVPSQ +++ ++Y SIN P+ G + RS
Sbjct: 477 ARDPDLGLNGSVSYQIVPSQVRDMPV--------------FTYVSIN-PNSGDIYALRSF 521
Query: 96 DFEKTQRYLVTIVA 109
+ E+T+ + ++A
Sbjct: 522 NHEQTKAFEFKVLA 535
>gi|296434287|ref|NP_001171809.1| protocadherin-19 isoform c precursor [Homo sapiens]
gi|397478182|ref|XP_003810432.1| PREDICTED: protocadherin-19 isoform 2 [Pan paniscus]
gi|73620979|sp|Q8TAB3.3|PCD19_HUMAN RecName: Full=Protocadherin-19; Flags: Precursor
gi|161138205|gb|ABX58058.1| protocadherin 19 [Homo sapiens]
Length = 1148
Score = 38.1 bits (87), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 15/74 (20%)
Query: 36 AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSL 95
A D D G+NG V Y IVPSQ +++ ++Y SIN P+ G + RS
Sbjct: 477 ARDPDLGLNGSVSYQIVPSQVRDMPV--------------FTYVSIN-PNSGDIYALRSF 521
Query: 96 DFEKTQRYLVTIVA 109
+ E+T+ + ++A
Sbjct: 522 NHEQTKAFEFKVLA 535
>gi|403298744|ref|XP_003940168.1| PREDICTED: protocadherin-19 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 1145
Score = 38.1 bits (87), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 15/74 (20%)
Query: 36 AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSL 95
A D D G+NG V Y IVPSQ +++ ++Y SIN P+ G + RS
Sbjct: 477 ARDPDLGLNGSVSYQIVPSQVRDMPV--------------FTYVSIN-PNSGDIYALRSF 521
Query: 96 DFEKTQRYLVTIVA 109
+ E+T+ + ++A
Sbjct: 522 NHEQTKAFEFKVLA 535
>gi|444525553|gb|ELV14079.1| Protocadherin-12 [Tupaia chinensis]
Length = 1241
Score = 37.7 bits (86), Expect = 0.77, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 36/81 (44%), Gaps = 17/81 (20%)
Query: 29 TIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQ 88
T+ NL A D D G NG VE+F+ + + FSI+ GQ
Sbjct: 266 TLLINLTATDPDQGPNGEVEFFLSEHMPREV----------------LDTFSID-AKTGQ 308
Query: 89 VTVNRSLDFEKTQRYLVTIVA 109
V + RSLD+EK Y V + A
Sbjct: 309 VFLLRSLDYEKNSAYEVDVQA 329
>gi|440911967|gb|ELR61581.1| Protocadherin-19, partial [Bos grunniens mutus]
Length = 1132
Score = 37.7 bits (86), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 15/74 (20%)
Query: 36 AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSL 95
A D D G+NG V Y IVPSQ +++ ++Y SIN P+ G + RS
Sbjct: 464 ARDPDLGLNGSVSYQIVPSQVRDMPV--------------FTYVSIN-PNSGDIYALRSF 508
Query: 96 DFEKTQRYLVTIVA 109
+ E+T+ + ++A
Sbjct: 509 NHEQTKAFEFKVLA 522
>gi|18700014|ref|NP_570948.1| cadherin-related family member 1 precursor [Mus musculus]
gi|81879437|sp|Q8VHP6.1|CDHR1_MOUSE RecName: Full=Cadherin-related family member 1; AltName:
Full=Photoreceptor cadherin; Short=prCAD; AltName:
Full=Protocadherin-21; Flags: Precursor
gi|18182377|gb|AAL65140.1|AF426393_1 photoreceptor cadherin [Mus musculus]
gi|34849787|gb|AAH58270.1| Protocadherin 21 [Mus musculus]
gi|37537227|gb|AAH42454.2| Protocadherin 21 [Mus musculus]
Length = 859
Score = 37.7 bits (86), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 24/97 (24%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P I+RV + P GS+IFK ++A D D G G V Y + +N+ +
Sbjct: 139 PYIIRVPENIPAGSSIFK-VQAEDKDTGSGGSVTYSL-----QNLHS------------- 179
Query: 75 GYSYFSINLPHQG--QVTVNRSLDFEKTQRYLVTIVA 109
S FS++ H G ++ +LD+EK++ + +T++A
Sbjct: 180 --SKFSMDR-HSGVLRLQAGATLDYEKSRAHYITVIA 213
>gi|326928556|ref|XP_003210443.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 2-like [Meleagris
gallopavo]
Length = 4281
Score = 37.7 bits (86), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 21/89 (23%)
Query: 22 DLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSI 81
D VG+ I + +RA+D D G N + Y + G A+G +FSI
Sbjct: 1573 DSAAVGTEILQ-VRALDQDQGANAEIHYSL------QAGNAEG-------------FFSI 1612
Query: 82 NLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ PH G +TV + LD K +R+ + + A
Sbjct: 1613 D-PHSGIITVAQKLDPSKQERFTLIVKAE 1640
>gi|157742892|gb|AAI16270.1| Pcdhb8 protein [Mus musculus]
Length = 776
Score = 37.7 bits (86), Expect = 0.77, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 15/70 (21%)
Query: 34 LRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNR 93
+ A D+D+G NGL+ Y ++P D+ +G A S SIN GQ+ R
Sbjct: 469 ISATDSDSGSNGLIIYSLLPPHDQQLGLA--------------SLISIN-SDNGQLFALR 513
Query: 94 SLDFEKTQRY 103
+LD+E Q +
Sbjct: 514 ALDYEALQAF 523
>gi|297710521|ref|XP_002831925.1| PREDICTED: protocadherin-19 isoform 2 [Pongo abelii]
Length = 1148
Score = 37.7 bits (86), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 15/74 (20%)
Query: 36 AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSL 95
A D D G+NG V Y IVPSQ +++ ++Y SIN P+ G + RS
Sbjct: 477 ARDPDLGLNGSVSYQIVPSQVRDMPV--------------FTYVSIN-PNSGDIYALRSF 521
Query: 96 DFEKTQRYLVTIVA 109
+ E+T+ + ++A
Sbjct: 522 NHEQTKAFEFKVLA 535
>gi|301787011|ref|XP_002928921.1| PREDICTED: protocadherin-19-like isoform 1 [Ailuropoda melanoleuca]
gi|281344172|gb|EFB19756.1| hypothetical protein PANDA_018983 [Ailuropoda melanoleuca]
Length = 1145
Score = 37.7 bits (86), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 15/74 (20%)
Query: 36 AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSL 95
A D D G+NG V Y IVPSQ +++ ++Y SIN P+ G + RS
Sbjct: 477 ARDPDLGLNGSVSYQIVPSQVRDMPV--------------FTYVSIN-PNSGDIYALRSF 521
Query: 96 DFEKTQRYLVTIVA 109
+ E+T+ + ++A
Sbjct: 522 NHEQTKAFEFKVLA 535
>gi|26338323|dbj|BAC32847.1| unnamed protein product [Mus musculus]
Length = 671
Score = 37.7 bits (86), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 15/74 (20%)
Query: 36 AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSL 95
A D D G+NG V Y IVPSQ +++ ++Y SIN P+ G + RS
Sbjct: 372 ARDPDMGLNGSVSYQIVPSQVRDMPV--------------FTYVSIN-PNSGDIYALRSF 416
Query: 96 DFEKTQRYLVTIVA 109
+ E+T+ + ++A
Sbjct: 417 NHEQTKAFEFKVLA 430
>gi|449512576|ref|XP_002199124.2| PREDICTED: protocadherin gamma-C3-like, partial [Taeniopygia
guttata]
Length = 772
Score = 37.7 bits (86), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 19/92 (20%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V + + TP GST+ N+ A DADAG N + Y G GK V+ ++
Sbjct: 170 VSLREDTPPGSTVL-NISASDADAGTNAHITY--------------GFGKMPTKVLQKFT 214
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
+ +G +T+ LDFE T+ Y + + A
Sbjct: 215 VDA----QRGTITLQEELDFEDTRGYTLLVEA 242
>gi|426258401|ref|XP_004022800.1| PREDICTED: protocadherin-19 [Ovis aries]
Length = 1122
Score = 37.7 bits (86), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 15/74 (20%)
Query: 36 AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSL 95
A D D G+NG V Y IVPSQ +++ ++Y SIN P+ G + RS
Sbjct: 454 ARDPDLGLNGSVSYQIVPSQVRDMPV--------------FTYVSIN-PNSGDIYALRSF 498
Query: 96 DFEKTQRYLVTIVA 109
+ E+T+ + ++A
Sbjct: 499 NHEQTKAFEFKVLA 512
>gi|358419856|ref|XP_003584345.1| PREDICTED: protocadherin-19 isoform 1 [Bos taurus]
gi|359081739|ref|XP_003588171.1| PREDICTED: protocadherin-19 isoform 2 [Bos taurus]
Length = 1145
Score = 37.7 bits (86), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 15/74 (20%)
Query: 36 AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSL 95
A D D G+NG V Y IVPSQ +++ ++Y SIN P+ G + RS
Sbjct: 477 ARDPDLGLNGSVSYQIVPSQVRDMPV--------------FTYVSIN-PNSGDIYALRSF 521
Query: 96 DFEKTQRYLVTIVA 109
+ E+T+ + ++A
Sbjct: 522 NHEQTKAFEFKVLA 535
>gi|332254732|ref|XP_003276486.1| PREDICTED: protocadherin-19 isoform 2 [Nomascus leucogenys]
Length = 1148
Score = 37.7 bits (86), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 15/74 (20%)
Query: 36 AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSL 95
A D D G+NG V Y IVPSQ +++ ++Y SIN P+ G + RS
Sbjct: 477 ARDPDLGLNGSVSYQIVPSQVRDMPV--------------FTYVSIN-PNSGDIYALRSF 521
Query: 96 DFEKTQRYLVTIVA 109
+ E+T+ + ++A
Sbjct: 522 NHEQTKAFEFKVLA 535
>gi|327269193|ref|XP_003219379.1| PREDICTED: protocadherin Fat 3-like [Anolis carolinensis]
Length = 4553
Score = 37.7 bits (86), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 47/96 (48%), Gaps = 21/96 (21%)
Query: 12 RTIPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVT 71
++ P V V + PVG+TIF+ ++A D D+G NG V Y I D N+
Sbjct: 723 KSFPNDVSVREDLPVGATIFR-IKAYDVDSGFNGKVLYTI---SDGNVD----------- 767
Query: 72 VVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTI 107
S F++ + G + V LD EKT+ YL+ I
Sbjct: 768 -----SCFNLEM-ETGLLKVLLPLDREKTELYLLNI 797
>gi|301770757|ref|XP_002920796.1| PREDICTED: protocadherin Fat 2-like [Ailuropoda melanoleuca]
gi|281339749|gb|EFB15333.1| hypothetical protein PANDA_009583 [Ailuropoda melanoleuca]
Length = 4351
Score = 37.7 bits (86), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 44/100 (44%), Gaps = 23/100 (23%)
Query: 10 RKRTIPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDR 69
R + +P + D T G +F+ + A D D GVNG V Y
Sbjct: 2069 RFKHLPYYTIIQDGTEPGDVLFQ-VSATDQDLGVNGAVTY-------------------- 2107
Query: 70 VTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
+ Y+YF I+ P+ G +++ + D++ +Y + ++A
Sbjct: 2108 -AFAEDYAYFRID-PYLGDISLKKPFDYKALNKYHLKVIA 2145
>gi|116110520|gb|ABJ74639.1| stan [Drosophila miranda]
Length = 549
Score = 37.7 bits (86), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 41/95 (43%), Gaps = 16/95 (16%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P V + PVG+T+ + A D+D G+N + Y + +G+ D
Sbjct: 87 PYSASVFEDAPVGTTVLV-VSATDSDVGINAQITYSLNEESINGLGSPDP---------- 135
Query: 75 GYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
FSIN P G + N LD E YL+T+ A
Sbjct: 136 ----FSIN-PQTGAIVTNAPLDRETASGYLLTVTA 165
>gi|395850619|ref|XP_003797877.1| PREDICTED: protocadherin-19 isoform 1 [Otolemur garnettii]
Length = 1148
Score = 37.7 bits (86), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 15/74 (20%)
Query: 36 AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSL 95
A D D G+NG V Y IVPSQ +++ ++Y SIN P+ G + RS
Sbjct: 477 ARDPDLGLNGSVSYQIVPSQVRDMPV--------------FTYVSIN-PNSGDIYALRSF 521
Query: 96 DFEKTQRYLVTIVA 109
+ E+T+ + ++A
Sbjct: 522 NHEQTKAFEFKVLA 535
>gi|344296748|ref|XP_003420066.1| PREDICTED: protocadherin-19 isoform 1 [Loxodonta africana]
Length = 1145
Score = 37.7 bits (86), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 15/74 (20%)
Query: 36 AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSL 95
A D D G+NG V Y IVPSQ +++ ++Y SIN P+ G + RS
Sbjct: 477 ARDPDLGLNGSVSYQIVPSQVRDMPV--------------FTYVSIN-PNSGDIYALRSF 521
Query: 96 DFEKTQRYLVTIVA 109
+ E+T+ + ++A
Sbjct: 522 NHEQTKAFEFKVLA 535
>gi|297295324|ref|XP_002804588.1| PREDICTED: protein dachsous-like [Macaca mulatta]
Length = 2233
Score = 37.7 bits (86), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 15/72 (20%)
Query: 30 IFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQV 89
+ +L A D D+G+N L+ Y ++ +++++ + S+ S+N P G V
Sbjct: 1330 LLCSLAASDPDSGLNALISYSLLEPRNRDVSAS--------------SFISLN-PQTGAV 1374
Query: 90 TVNRSLDFEKTQ 101
RS D+E+TQ
Sbjct: 1375 HATRSFDYEQTQ 1386
>gi|410896880|ref|XP_003961927.1| PREDICTED: protocadherin-8-like [Takifugu rubripes]
Length = 998
Score = 37.7 bits (86), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 44/95 (46%), Gaps = 18/95 (18%)
Query: 16 VIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
+ V + + +PVG + K + A D D GVNG V Y + +G R+ VD
Sbjct: 275 LTVELDEDSPVGHRVLK-VHAFDPDDGVNGEVTYALAEGFSPEVG--------RLFHVD- 324
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
P+ G VT+ +DFE+ + Y + I AS
Sbjct: 325 --------PYTGDVTLKALVDFERRRSYELVIKAS 351
>gi|301787013|ref|XP_002928922.1| PREDICTED: protocadherin-19-like isoform 2 [Ailuropoda melanoleuca]
Length = 1098
Score = 37.7 bits (86), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 15/74 (20%)
Query: 36 AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSL 95
A D D G+NG V Y IVPSQ +++ ++Y SIN P+ G + RS
Sbjct: 477 ARDPDLGLNGSVSYQIVPSQVRDMPV--------------FTYVSIN-PNSGDIYALRSF 521
Query: 96 DFEKTQRYLVTIVA 109
+ E+T+ + ++A
Sbjct: 522 NHEQTKAFEFKVLA 535
>gi|297710519|ref|XP_002831924.1| PREDICTED: protocadherin-19 isoform 1 [Pongo abelii]
Length = 1101
Score = 37.7 bits (86), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 15/74 (20%)
Query: 36 AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSL 95
A D D G+NG V Y IVPSQ +++ ++Y SIN P+ G + RS
Sbjct: 477 ARDPDLGLNGSVSYQIVPSQVRDMPV--------------FTYVSIN-PNSGDIYALRSF 521
Query: 96 DFEKTQRYLVTIVA 109
+ E+T+ + ++A
Sbjct: 522 NHEQTKAFEFKVLA 535
>gi|387539726|gb|AFJ70490.1| protocadherin-19 isoform a precursor [Macaca mulatta]
Length = 1101
Score = 37.7 bits (86), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 15/74 (20%)
Query: 36 AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSL 95
A D D G+NG V Y IVPSQ +++ ++Y SIN P+ G + RS
Sbjct: 477 ARDPDLGLNGSVSYQIVPSQVRDMPV--------------FTYVSIN-PNSGDIYALRSF 521
Query: 96 DFEKTQRYLVTIVA 109
+ E+T+ + ++A
Sbjct: 522 NHEQTKAFEFKVLA 535
>gi|195591705|ref|XP_002085579.1| GD14851 [Drosophila simulans]
gi|194197588|gb|EDX11164.1| GD14851 [Drosophila simulans]
Length = 2585
Score = 37.7 bits (86), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 41/84 (48%), Gaps = 21/84 (25%)
Query: 26 VGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPH 85
VGS I +++A D D+ VNGLV Y NI D +G+ FS++ P
Sbjct: 1602 VGSKIL-DVKATDEDSDVNGLVTY--------NIERGDNIGQ-----------FSVD-PK 1640
Query: 86 QGQVTVNRSLDFEKTQRYLVTIVA 109
G ++V+R LD E Y + I A
Sbjct: 1641 NGTISVSRPLDRETISHYTLEIQA 1664
>gi|157426845|ref|NP_065817.2| protocadherin-19 isoform b precursor [Homo sapiens]
Length = 1100
Score = 37.7 bits (86), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 15/74 (20%)
Query: 36 AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSL 95
A D D G+NG V Y IVPSQ +++ ++Y SIN P+ G + RS
Sbjct: 477 ARDPDLGLNGSVSYQIVPSQVRDMPV--------------FTYVSIN-PNSGDIYALRSF 521
Query: 96 DFEKTQRYLVTIVA 109
+ E+T+ + ++A
Sbjct: 522 NHEQTKAFEFKVLA 535
>gi|157426847|ref|NP_001098713.1| protocadherin-19 isoform a precursor [Homo sapiens]
gi|397478180|ref|XP_003810431.1| PREDICTED: protocadherin-19 isoform 1 [Pan paniscus]
gi|168273220|dbj|BAG10449.1| protocadherin-19 precursor [synthetic construct]
Length = 1101
Score = 37.7 bits (86), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 15/74 (20%)
Query: 36 AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSL 95
A D D G+NG V Y IVPSQ +++ ++Y SIN P+ G + RS
Sbjct: 477 ARDPDLGLNGSVSYQIVPSQVRDMPV--------------FTYVSIN-PNSGDIYALRSF 521
Query: 96 DFEKTQRYLVTIVA 109
+ E+T+ + ++A
Sbjct: 522 NHEQTKAFEFKVLA 535
>gi|338729354|ref|XP_003365876.1| PREDICTED: protocadherin-19 isoform 2 [Equus caballus]
Length = 1217
Score = 37.7 bits (86), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 15/74 (20%)
Query: 36 AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSL 95
A D D G+NG V Y IVPSQ +++ ++Y SIN P+ G + RS
Sbjct: 546 ARDPDLGLNGSVSYQIVPSQVRDMPV--------------FTYVSIN-PNSGDIYALRSF 590
Query: 96 DFEKTQRYLVTIVA 109
+ E+T+ + ++A
Sbjct: 591 NHEQTKAFEFKVLA 604
>gi|426396637|ref|XP_004064538.1| PREDICTED: protocadherin-19 isoform 2 [Gorilla gorilla gorilla]
Length = 1101
Score = 37.7 bits (86), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 15/74 (20%)
Query: 36 AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSL 95
A D D G+NG V Y IVPSQ +++ ++Y SIN P+ G + RS
Sbjct: 477 ARDPDLGLNGSVSYQIVPSQVRDMPV--------------FTYVSIN-PNSGDIYALRSF 521
Query: 96 DFEKTQRYLVTIVA 109
+ E+T+ + ++A
Sbjct: 522 NHEQTKAFEFKVLA 535
>gi|355562447|gb|EHH19041.1| hypothetical protein EGK_19676 [Macaca mulatta]
Length = 859
Score = 37.7 bits (86), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 25/97 (25%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P + V + P GS+IFK + AVD D G G V YF+ +N+
Sbjct: 139 PYVALVPEDIPAGSSIFK-VHAVDRDTGSGGSVTYFL-----QNL--------------- 177
Query: 75 GYSYFSINLPHQG--QVTVNRSLDFEKTQRYLVTIVA 109
+S F+++ H G ++ +LD+E+++ + VT+VA
Sbjct: 178 -HSPFAVDR-HSGVLRLQAGATLDYERSRTHYVTVVA 212
>gi|324499655|gb|ADY39858.1| Protocadherin-like wing polarity protein stan [Ascaris suum]
Length = 2637
Score = 37.7 bits (86), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 17/90 (18%)
Query: 20 VSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYF 79
+S+ TPVG++ F + A D DAG N V+YFI DK D DR +
Sbjct: 802 ISEDTPVGTS-FMQITATDLDAGSNAFVDYFI-DVNDKRALKVDAFKLDRSS-------- 851
Query: 80 SINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
G + V++ LD E+ +++ ++A
Sbjct: 852 -------GTLRVHKKLDREQNDIHVIPVIA 874
>gi|432098502|gb|ELK28221.1| Protocadherin-19 [Myotis davidii]
Length = 1148
Score = 37.7 bits (86), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 15/74 (20%)
Query: 36 AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSL 95
A D D G+NG V Y IVPSQ +++ ++Y SIN P+ G + RS
Sbjct: 477 ARDPDLGLNGSVSYQIVPSQVRDMPV--------------FTYVSIN-PNSGDIYALRSF 521
Query: 96 DFEKTQRYLVTIVA 109
+ E+T+ + ++A
Sbjct: 522 NHEQTKAFEFKVLA 535
>gi|402880272|ref|XP_003903732.1| PREDICTED: cadherin-related family member 1 [Papio anubis]
Length = 859
Score = 37.7 bits (86), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 25/97 (25%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P + V + P GS+IFK + AVD D G G V YF+ +N+
Sbjct: 139 PYVALVPEDIPAGSSIFK-VHAVDRDTGSGGSVTYFL-----QNL--------------- 177
Query: 75 GYSYFSINLPHQG--QVTVNRSLDFEKTQRYLVTIVA 109
+S F+++ H G ++ +LD+E+++ + VT+VA
Sbjct: 178 -HSPFAVDR-HSGVLRLQAGATLDYERSRTHYVTVVA 212
>gi|395850621|ref|XP_003797878.1| PREDICTED: protocadherin-19 isoform 2 [Otolemur garnettii]
Length = 1101
Score = 37.7 bits (86), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 15/74 (20%)
Query: 36 AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSL 95
A D D G+NG V Y IVPSQ +++ ++Y SIN P+ G + RS
Sbjct: 477 ARDPDLGLNGSVSYQIVPSQVRDMPV--------------FTYVSIN-PNSGDIYALRSF 521
Query: 96 DFEKTQRYLVTIVA 109
+ E+T+ + ++A
Sbjct: 522 NHEQTKAFEFKVLA 535
>gi|355782790|gb|EHH64711.1| hypothetical protein EGM_18008 [Macaca fascicularis]
Length = 859
Score = 37.7 bits (86), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 25/97 (25%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P + V + P GS+IFK + AVD D G G V YF+ +N+
Sbjct: 139 PYVALVPEDIPAGSSIFK-VHAVDRDTGSGGSVTYFL-----QNL--------------- 177
Query: 75 GYSYFSINLPHQG--QVTVNRSLDFEKTQRYLVTIVA 109
+S F+++ H G ++ +LD+E+++ + VT+VA
Sbjct: 178 -HSPFAVDR-HSGVLRLQAGATLDYERSRTHYVTVVA 212
>gi|332254730|ref|XP_003276485.1| PREDICTED: protocadherin-19 isoform 1 [Nomascus leucogenys]
Length = 1101
Score = 37.7 bits (86), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 15/74 (20%)
Query: 36 AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSL 95
A D D G+NG V Y IVPSQ +++ ++Y SIN P+ G + RS
Sbjct: 477 ARDPDLGLNGSVSYQIVPSQVRDMPV--------------FTYVSIN-PNSGDIYALRSF 521
Query: 96 DFEKTQRYLVTIVA 109
+ E+T+ + ++A
Sbjct: 522 NHEQTKAFEFKVLA 535
>gi|321479216|gb|EFX90172.1| hypothetical protein DAPPUDRAFT_6 [Daphnia pulex]
Length = 3261
Score = 37.7 bits (86), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 42/93 (45%), Gaps = 20/93 (21%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V V + VG + K + A D D GVN +V Y + DG GK Y
Sbjct: 541 VSVREDEAVGHCVLK-VSATDPDCGVNAIVNYTM----------GDGFGK--------YR 581
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F +N P G++ ++ +LD EK Y I+A+
Sbjct: 582 EFEVN-PSSGEICISAALDHEKRNIYEFPILAT 613
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 45/97 (46%), Gaps = 22/97 (22%)
Query: 13 TIPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTV 72
T+ V + V++ +GS I+ A D D+G NG V Y ++ + D
Sbjct: 846 TVVVKISVAENAELGSPIYA-AHAHDDDSGDNGAVIYQLLTNPD---------------- 888
Query: 73 VDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
F I+ P QG + + R LDFE TQ+Y + I A
Sbjct: 889 ----GLFKID-PRQGFIMLTRKLDFETTQKYALVIGA 920
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 19/91 (20%)
Query: 20 VSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYF 79
V++ +G+++ + + A D DAG NG + Y I Q +D V V+D
Sbjct: 219 VAENATIGTSVLQ-VFATDTDAGDNGRITYSINRRQSD---------RDSVFVID----- 263
Query: 80 SINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
P G ++VNR LDFE + + + +VAS
Sbjct: 264 ----PLTGVISVNRPLDFETKEVHELVVVAS 290
>gi|156379093|ref|XP_001631293.1| predicted protein [Nematostella vectensis]
gi|156218331|gb|EDO39230.1| predicted protein [Nematostella vectensis]
Length = 4354
Score = 37.7 bits (86), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 21/94 (22%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
+ V + +P+G+++ ++ A DAD G N + YF I D GK
Sbjct: 2679 ISVPEDSPIGTSVL-DIYATDADVGENAKITYF--------ISKGDPEGK---------- 2719
Query: 78 YFSI-NLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
FSI P +G++ VN LDFE Y + + A+
Sbjct: 2720 -FSIVTSPVKGELVVNGKLDFETKSSYTLEVTAT 2752
>gi|403298746|ref|XP_003940169.1| PREDICTED: protocadherin-19 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 1098
Score = 37.7 bits (86), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 15/74 (20%)
Query: 36 AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSL 95
A D D G+NG V Y IVPSQ +++ ++Y SIN P+ G + RS
Sbjct: 477 ARDPDLGLNGSVSYQIVPSQVRDMPV--------------FTYVSIN-PNSGDIYALRSF 521
Query: 96 DFEKTQRYLVTIVA 109
+ E+T+ + ++A
Sbjct: 522 NHEQTKAFEFKVLA 535
>gi|334350362|ref|XP_003342342.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-19-like [Monodelphis
domestica]
Length = 1144
Score = 37.7 bits (86), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 15/74 (20%)
Query: 36 AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSL 95
A D D G+NG V Y IVPSQ +++ ++Y SIN P+ G + RS
Sbjct: 475 ARDPDLGLNGSVSYQIVPSQVRDMPV--------------FTYVSIN-PNSGDIYALRSF 519
Query: 96 DFEKTQRYLVTIVA 109
+ E+T+ + ++A
Sbjct: 520 NHEQTKAFEFKVLA 533
>gi|194680343|ref|XP_602429.4| PREDICTED: protocadherin-19 isoform 2 [Bos taurus]
gi|297492738|ref|XP_002699839.1| PREDICTED: protocadherin-19 isoform 1 [Bos taurus]
gi|296471029|tpg|DAA13144.1| TPA: protocadherin 10-like [Bos taurus]
Length = 1098
Score = 37.7 bits (86), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 15/74 (20%)
Query: 36 AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSL 95
A D D G+NG V Y IVPSQ +++ ++Y SIN P+ G + RS
Sbjct: 477 ARDPDLGLNGSVSYQIVPSQVRDMPV--------------FTYVSIN-PNSGDIYALRSF 521
Query: 96 DFEKTQRYLVTIVA 109
+ E+T+ + ++A
Sbjct: 522 NHEQTKAFEFKVLA 535
>gi|60279655|ref|NP_001012500.1| protocadherin 15a precursor [Danio rerio]
gi|57471174|gb|AAW50923.1| protocadherin 15a [Danio rerio]
Length = 1796
Score = 37.7 bits (86), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 44/97 (45%), Gaps = 19/97 (19%)
Query: 18 VRVSDLTPVGSTIFK----NLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVV 73
V V++LTPVG+TIF N A D D G NG +EY I D + V +
Sbjct: 159 VSVNELTPVGTTIFTGFSGNNGATDIDDGPNGQIEYAI------QYNPNDPMSNRTVRIA 212
Query: 74 DGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
S G + + L++E+ RYL+ + A+
Sbjct: 213 GTLS---------GNIVLAERLNYEERTRYLIIVQAN 240
>gi|344296750|ref|XP_003420067.1| PREDICTED: protocadherin-19 isoform 2 [Loxodonta africana]
Length = 1098
Score = 37.7 bits (86), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 15/74 (20%)
Query: 36 AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSL 95
A D D G+NG V Y IVPSQ +++ ++Y SIN P+ G + RS
Sbjct: 477 ARDPDLGLNGSVSYQIVPSQVRDMPV--------------FTYVSIN-PNSGDIYALRSF 521
Query: 96 DFEKTQRYLVTIVA 109
+ E+T+ + ++A
Sbjct: 522 NHEQTKAFEFKVLA 535
>gi|296235955|ref|XP_002763118.1| PREDICTED: protocadherin-19 isoform 1 [Callithrix jacchus]
Length = 1098
Score = 37.7 bits (86), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 15/74 (20%)
Query: 36 AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSL 95
A D D G+NG V Y IVPSQ +++ ++Y SIN P+ G + RS
Sbjct: 477 ARDPDLGLNGSVSYQIVPSQVRDMPV--------------FTYVSIN-PNSGDIYALRSF 521
Query: 96 DFEKTQRYLVTIVA 109
+ E+T+ + ++A
Sbjct: 522 NHEQTKAFEFKVLA 535
>gi|194228094|ref|XP_001914715.1| PREDICTED: protocadherin-19 isoform 1 [Equus caballus]
Length = 1170
Score = 37.7 bits (86), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 15/74 (20%)
Query: 36 AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSL 95
A D D G+NG V Y IVPSQ +++ ++Y SIN P+ G + RS
Sbjct: 546 ARDPDLGLNGSVSYQIVPSQVRDMPV--------------FTYVSIN-PNSGDIYALRSF 590
Query: 96 DFEKTQRYLVTIVA 109
+ E+T+ + ++A
Sbjct: 591 NHEQTKAFEFKVLA 604
>gi|281306738|ref|NP_001162600.1| protocadherin-19 precursor [Rattus norvegicus]
gi|149055462|gb|EDM07046.1| protocadherin 19 (predicted) [Rattus norvegicus]
Length = 1098
Score = 37.7 bits (86), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 15/74 (20%)
Query: 36 AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSL 95
A D D G+NG V Y IVPSQ +++ ++Y SIN P+ G + RS
Sbjct: 477 ARDPDLGLNGSVSYQIVPSQVRDMPV--------------FTYVSIN-PNSGDIYALRSF 521
Query: 96 DFEKTQRYLVTIVA 109
+ E+T+ + ++A
Sbjct: 522 NHEQTKAFEFKVLA 535
>gi|403285668|ref|XP_003934135.1| PREDICTED: protocadherin Fat 2 [Saimiri boliviensis boliviensis]
Length = 4369
Score = 37.7 bits (86), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 44/98 (44%), Gaps = 23/98 (23%)
Query: 12 RTIPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVT 71
+ +P + D T G +F+ + A D D G NG+V Y T
Sbjct: 2091 KHLPYYTIIQDGTEPGDVLFQ-VSATDEDLGTNGVVTY---------------------T 2128
Query: 72 VVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
+ Y+YF I+ P+ G +++ + D++ +Y + ++A
Sbjct: 2129 FAEDYTYFRID-PYLGDISLRKPFDYQALNKYRLKVIA 2165
>gi|334329182|ref|XP_003341195.1| PREDICTED: protocadherin-16 [Monodelphis domestica]
Length = 3184
Score = 37.7 bits (86), Expect = 0.84, Method: Composition-based stats.
Identities = 32/92 (34%), Positives = 43/92 (46%), Gaps = 24/92 (26%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
VRVS+ P G+T+ LRA D D GVNG V Y GV D
Sbjct: 1534 VRVSENRPPGTTVL-TLRATDPDLGVNGQVTY-------------GGVSGDT-------- 1571
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
FS++ P+ G +T + LD E+ Q +T+ A
Sbjct: 1572 -FSLD-PNSGVLTTRQVLDREEQQEINLTVYA 1601
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 48/110 (43%), Gaps = 28/110 (25%)
Query: 2 TCTVKVSNRKRTI--------PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVP 53
T TV+VS R R P + V++ P G+T ++ A D D+G NG + Y ++
Sbjct: 967 TATVRVSIRDRNDHGPRLTEEPTFLAVAENQPPGTTA-GHITATDRDSGPNGHLTYHLLQ 1025
Query: 54 SQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQRY 103
D++ F I+ P G+VT RSLD E+ Y
Sbjct: 1026 PPDES------------------GAFHIH-PQTGEVTTRRSLDREQQSSY 1056
>gi|197097808|ref|NP_001126353.1| protocadherin beta-4 precursor [Pongo abelii]
gi|55731190|emb|CAH92309.1| hypothetical protein [Pongo abelii]
Length = 795
Score = 37.7 bits (86), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 36/78 (46%), Gaps = 15/78 (19%)
Query: 33 NLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVN 92
++RA D D+G N V Y ++P QD N+ A S SIN G +
Sbjct: 471 SVRATDRDSGTNAQVTYSLLPPQDPNLPLA--------------SLVSINA-DNGHLFAL 515
Query: 93 RSLDFEKTQRYLVTIVAS 110
RSLD+E Q + + AS
Sbjct: 516 RSLDYEALQAFEFRVGAS 533
>gi|194219808|ref|XP_001917815.1| PREDICTED: protocadherin gamma-B1-like [Equus caballus]
Length = 812
Score = 37.7 bits (86), Expect = 0.85, Method: Composition-based stats.
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 19/92 (20%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V + + P G+++ + + A D D GVN V Y + N T+ +
Sbjct: 247 VSLQENVPPGTSVLR-VMATDQDEGVNAEVTYAFL-----NAPTSTSL------------ 288
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
F++N P+ G +T N +LDFE+T RY++ + A
Sbjct: 289 LFNLN-PNTGDITTNGTLDFEETSRYILGVEA 319
>gi|402910758|ref|XP_003918019.1| PREDICTED: protocadherin-19-like, partial [Papio anubis]
Length = 939
Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 15/74 (20%)
Query: 36 AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSL 95
A D D G+NG V Y IVPSQ +++ ++Y SIN P+ G + RS
Sbjct: 477 ARDPDLGLNGSVSYQIVPSQVRDMPV--------------FTYVSIN-PNSGDIYALRSF 521
Query: 96 DFEKTQRYLVTIVA 109
+ E+T+ + ++A
Sbjct: 522 NHEQTKAFEFKVLA 535
>gi|348543886|ref|XP_003459413.1| PREDICTED: protocadherin Fat 3-like [Oreochromis niloticus]
Length = 4593
Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 13/86 (15%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
PVG+ I + ++A D D+G NG V Y +G+ + +D T+V S FSI+
Sbjct: 2837 PVGTRIIQ-VQARDPDSGANGQVTY--------TLGSLIQLKEDSDTLV---STFSID-S 2883
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ G +T + LD E + Y T+VAS
Sbjct: 2884 NTGWITTRKDLDHETSPSYTFTVVAS 2909
Score = 34.7 bits (78), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 43/96 (44%), Gaps = 21/96 (21%)
Query: 12 RTIPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVT 71
+T P + V + VGS++FK + A D D G NG + Y I D NI
Sbjct: 727 KTFPTHITVQEDLKVGSSVFK-VNAYDGDTGFNGQILYSI---SDGNIDNC--------- 773
Query: 72 VVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTI 107
F+I+ G ++V +D EK RYL+ +
Sbjct: 774 -------FTIDT-QTGLISVFLHMDREKRDRYLLNL 801
>gi|224045060|ref|XP_002199084.1| PREDICTED: cadherin-12 [Taeniopygia guttata]
Length = 793
Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 17/93 (18%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
++V + + VGS I + +RAVD D G N +EY IVP N+ D Y+
Sbjct: 276 LKVPETSHVGSAIGR-IRAVDPDFGKNAEIEYNIVPGDGGNLFD---------ITTDEYT 325
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+G + + + LDFE + Y + AS
Sbjct: 326 -------QEGVIKLKKPLDFETKKAYTFKVEAS 351
>gi|444721940|gb|ELW62647.1| Protocadherin Fat 4 [Tupaia chinensis]
Length = 2300
Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 43/93 (46%), Gaps = 22/93 (23%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V +S+ PV S F+ ++A D D+G NG + Y I + N G A G+ D
Sbjct: 964 VTLSESEPVNSRFFQ-VQASDKDSGANGEISYTIA---EGNTGDAFGIFPD--------- 1010
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
GQ+ + LD E RY++ +VAS
Sbjct: 1011 ---------GQLYIKSELDRELQDRYVLVVVAS 1034
>gi|431895727|gb|ELK05148.1| Protocadherin-19 [Pteropus alecto]
Length = 1195
Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 15/74 (20%)
Query: 36 AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSL 95
A D D G+NG V Y IVPSQ +++ ++Y SIN P+ G + RS
Sbjct: 477 ARDPDLGLNGSVSYQIVPSQVRDMPV--------------FTYVSIN-PNSGDIYALRSF 521
Query: 96 DFEKTQRYLVTIVA 109
+ E+T+ + ++A
Sbjct: 522 NHEQTKAFEFKVLA 535
>gi|410988979|ref|XP_004000747.1| PREDICTED: protocadherin-19 isoform 2 [Felis catus]
Length = 1143
Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 15/74 (20%)
Query: 36 AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSL 95
A D D G+NG V Y IVPSQ +++ ++Y SIN P+ G + RS
Sbjct: 477 ARDPDLGLNGSVSYQIVPSQVRDMPV--------------FTYVSIN-PNSGDIYALRSF 521
Query: 96 DFEKTQRYLVTIVA 109
+ E+T+ + ++A
Sbjct: 522 NHEQTKTFEFKVLA 535
>gi|395845725|ref|XP_003795575.1| PREDICTED: protocadherin Fat 4 isoform 2 [Otolemur garnettii]
Length = 4981
Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 42/92 (45%), Gaps = 22/92 (23%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V +S+ PV S FK ++A D D+G NG + Y I + N G A G+ D
Sbjct: 1003 VTLSESEPVNSRFFK-VQASDKDSGANGEIAYTIA---EGNTGDAFGIFPD--------- 1049
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
GQ+ + LD E RY++ +VA
Sbjct: 1050 ---------GQLYIKSELDRELQDRYVLLVVA 1072
Score = 34.3 bits (77), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 22/85 (25%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
P G+T+ +L A DAD+G N ++ Y V S D ++ D P
Sbjct: 3208 PSGTTVI-HLNATDADSGTNAVIAY-TVQSSDSDLFVID--------------------P 3245
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVA 109
+ G +T LDFE Q Y +T+ A
Sbjct: 3246 NTGVITTQGFLDFETKQSYHLTVKA 3270
>gi|395845723|ref|XP_003795574.1| PREDICTED: protocadherin Fat 4 isoform 1 [Otolemur garnettii]
Length = 4982
Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 42/92 (45%), Gaps = 22/92 (23%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V +S+ PV S FK ++A D D+G NG + Y I + N G A G+ D
Sbjct: 1003 VTLSESEPVNSRFFK-VQASDKDSGANGEIAYTIA---EGNTGDAFGIFPD--------- 1049
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
GQ+ + LD E RY++ +VA
Sbjct: 1050 ---------GQLYIKSELDRELQDRYVLLVVA 1072
Score = 34.3 bits (77), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 22/85 (25%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
P G+T+ +L A DAD+G N ++ Y V S D ++ D P
Sbjct: 3210 PSGTTVI-HLNATDADSGTNAVIAY-TVQSSDSDLFVID--------------------P 3247
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVA 109
+ G +T LDFE Q Y +T+ A
Sbjct: 3248 NTGVITTQGFLDFETKQSYHLTVKA 3272
>gi|119623210|gb|EAX02805.1| protocadherin 19, isoform CRA_b [Homo sapiens]
Length = 996
Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 15/74 (20%)
Query: 36 AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSL 95
A D D G+NG V Y IVPSQ +++ ++Y SIN P+ G + RS
Sbjct: 372 ARDPDLGLNGSVSYQIVPSQVRDMPV--------------FTYVSIN-PNSGDIYALRSF 416
Query: 96 DFEKTQRYLVTIVA 109
+ E+T+ + ++A
Sbjct: 417 NHEQTKAFEFKVLA 430
>gi|444518256|gb|ELV12058.1| Protocadherin-19 [Tupaia chinensis]
Length = 996
Score = 37.7 bits (86), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 15/74 (20%)
Query: 36 AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSL 95
A D D G+NG V Y IVPSQ +++ ++Y SIN P+ G + RS
Sbjct: 372 ARDPDLGLNGSVSYQIVPSQVRDMPV--------------FTYVSIN-PNSGDIYALRSF 416
Query: 96 DFEKTQRYLVTIVA 109
+ E+T+ + ++A
Sbjct: 417 NHEQTKAFEFKVLA 430
>gi|410988977|ref|XP_004000746.1| PREDICTED: protocadherin-19 isoform 1 [Felis catus]
Length = 1096
Score = 37.7 bits (86), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 15/74 (20%)
Query: 36 AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSL 95
A D D G+NG V Y IVPSQ +++ ++Y SIN P+ G + RS
Sbjct: 477 ARDPDLGLNGSVSYQIVPSQVRDMPV--------------FTYVSIN-PNSGDIYALRSF 521
Query: 96 DFEKTQRYLVTIVA 109
+ E+T+ + ++A
Sbjct: 522 NHEQTKTFEFKVLA 535
>gi|270006362|gb|EFA02810.1| dachsous [Tribolium castaneum]
Length = 3474
Score = 37.7 bits (86), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 19/76 (25%)
Query: 35 RAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRS 94
A D D+G NG+V Y IV N G G+ F+++ P G +T+ R
Sbjct: 944 HARDRDSGANGVVRYKIV-----NNGATGGL-------------FNVD-PKLGHLTLTRH 984
Query: 95 LDFEKTQRYLVTIVAS 110
LD+E TQR+ + I A+
Sbjct: 985 LDYETTQRHSLIITAT 1000
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 18/94 (19%)
Query: 17 IVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGY 76
+V V + P G+ + + +RAVD+D G N + Y ++ QD DGY
Sbjct: 1349 VVSVREEQPPGTEVVR-VRAVDSDNGQNASITYSLLKRQDS----------------DGY 1391
Query: 77 SYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I+ P G + LD E+ Y + +VAS
Sbjct: 1392 GVFKID-PLTGVIRTRMMLDHEEKTIYRLAVVAS 1424
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 19/93 (20%)
Query: 17 IVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGY 76
I V + VG+T+ + + A D D+G NG +EY I Q +D + +D
Sbjct: 231 IATVPENATVGTTVLQ-VFATDKDSGENGQIEYSINRRQSD---------RDNMFRID-- 278
Query: 77 SYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
P G + VN+ LDFE + + + IVA
Sbjct: 279 -------PTTGLIVVNKPLDFETKELHELVIVA 304
Score = 34.7 bits (78), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 48/116 (41%), Gaps = 26/116 (22%)
Query: 1 LTCTVKVSNRKRTIPVIVR------VSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPS 54
LT V+V + PV R V + PV S I + + AVD D G N + Y ++P
Sbjct: 1011 LTVLVEVQDVNDNPPVFERNEYSKSVEESRPVNSQILQ-VTAVDLDTGNNARLTYRLLPG 1069
Query: 55 QDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
N G G+ P+ G + + SLD E RY +T+ A+
Sbjct: 1070 N--NTGEVFGI-----------------FPNSGWLYLKGSLDRETKDRYELTVTAT 1106
>gi|431904131|gb|ELK09553.1| Cadherin-23 [Pteropus alecto]
Length = 1499
Score = 37.7 bits (86), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 40/85 (47%), Gaps = 23/85 (27%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
PVG+ I + A DAD+G L+EY + DG GK FSIN P
Sbjct: 561 PVGTVIL-TVTATDADSGNFALIEYSL----------GDGEGK-----------FSIN-P 597
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVA 109
G + V SLD EK Y++T +A
Sbjct: 598 TTGDIYVLSSLDREKKDHYILTALA 622
>gi|334349291|ref|XP_001365044.2| PREDICTED: cadherin-23, partial [Monodelphis domestica]
Length = 3103
Score = 37.7 bits (86), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 39/86 (45%), Gaps = 23/86 (26%)
Query: 24 TPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINL 83
TPVG+ I + A DAD+G L+EY ++VDG F IN
Sbjct: 2162 TPVGTVILT-VTATDADSGAFALIEY---------------------SLVDGEGKFGIN- 2198
Query: 84 PHQGQVTVNRSLDFEKTQRYLVTIVA 109
P G + V SLD E Y++T +A
Sbjct: 2199 PTTGDIYVLSSLDRETKAHYILTALA 2224
>gi|348570448|ref|XP_003471009.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-19-like [Cavia
porcellus]
Length = 1148
Score = 37.7 bits (86), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 15/74 (20%)
Query: 36 AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSL 95
A D D G+NG V Y IVPSQ +++ ++Y SIN P+ G + RS
Sbjct: 477 ARDPDLGLNGSVSYQIVPSQVRDMPV--------------FTYVSIN-PNAGDIYALRSF 521
Query: 96 DFEKTQRYLVTIVA 109
+ E+T+ + ++A
Sbjct: 522 NHEQTKAFEFKVLA 535
>gi|308487574|ref|XP_003105982.1| CRE-CDH-4 protein [Caenorhabditis remanei]
gi|308254556|gb|EFO98508.1| CRE-CDH-4 protein [Caenorhabditis remanei]
Length = 4379
Score = 37.7 bits (86), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 50/93 (53%), Gaps = 6/93 (6%)
Query: 17 IVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGY 76
I +V + T +G + +++A+DAD+ G V Y + + GTA+ D
Sbjct: 3257 IGKVKENTKIGEKVL-SVKAIDADSEHFGAVSYELEMISE---GTAEVRNSDSTPTHTLT 3312
Query: 77 SYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
F+IN QG + +N+S+D+EK ++Y + ++A
Sbjct: 3313 IPFTINA--QGDILINQSIDYEKVKKYNLKVIA 3343
>gi|301621398|ref|XP_002940042.1| PREDICTED: protocadherin gamma-B1-like [Xenopus (Silurana)
tropicalis]
Length = 824
Score = 37.7 bits (86), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 17/90 (18%)
Query: 20 VSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYF 79
+S+ TP+ ST+ + A D D G+N + Y S + ++ T S F
Sbjct: 254 ISENTPINSTVLI-VNATDKDEGLNAQITYSFSKSSENSLYT---------------SMF 297
Query: 80 SINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
SI+ P G++ R+L+FE+ + Y ++I A
Sbjct: 298 SIS-PTNGEIKSKRTLNFEEKRNYELSIQA 326
>gi|156386258|ref|XP_001633830.1| predicted protein [Nematostella vectensis]
gi|156220905|gb|EDO41767.1| predicted protein [Nematostella vectensis]
Length = 4187
Score = 37.7 bits (86), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 17/73 (23%)
Query: 38 DADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSLDF 97
D DAGVNG VEY IV + + S F I H G++ + LD+
Sbjct: 1439 DPDAGVNGEVEYCIV----------------QTAKAESASLFKIE-SHSGRILTVKPLDY 1481
Query: 98 EKTQRYLVTIVAS 110
E Q +++TI AS
Sbjct: 1482 ETMQEHVLTIKAS 1494
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 48/111 (43%), Gaps = 25/111 (22%)
Query: 3 CTVKVSNRK----RTIPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKN 58
T K+ NR R+ + +S+ TP+ +T+ A D D G NGLV Y IV
Sbjct: 674 ATAKLHNRHHPVFRSHDQNIHISESTPI-ATVVSQFMATDEDKGYNGLVLYSIVE----- 727
Query: 59 IGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
G D V F+IN+ G++TV LD E Y + I A
Sbjct: 728 -GDVDSV-------------FNINM-FTGELTVAMPLDRETISSYTLNISA 763
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 42/93 (45%), Gaps = 21/93 (22%)
Query: 17 IVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGY 76
I +S+L P+ + + + L A D DAG NG + Y I + +GK
Sbjct: 325 ITNLSELAPIHTPVLRVL-ATDKDAGSNGNIMYVITRGNE--------LGK--------- 366
Query: 77 SYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
F IN GQ+ LD+E QR+ +T+ A
Sbjct: 367 --FEIN-SKTGQIYTKGDLDYESRQRFDLTVAA 396
>gi|301629645|ref|XP_002943948.1| PREDICTED: protocadherin-16-like, partial [Xenopus (Silurana)
tropicalis]
Length = 1933
Score = 37.7 bits (86), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 47/95 (49%), Gaps = 21/95 (22%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P++V + + PVGST + A D D G NG V Y +V D+ GK
Sbjct: 584 PLVVWLPEDLPVGSTAIY-MVAQDPDLGDNGKVGYQLVGGNDE--------GK------- 627
Query: 75 GYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
F ++ P G +TV R+LD E T+ Y +T+VA
Sbjct: 628 ----FQLH-PSSGALTVVRTLDRETTEGYNLTVVA 657
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 48/116 (41%), Gaps = 31/116 (26%)
Query: 2 TCTVKV--------SNRKRTIPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVP 53
TCTV+V S R + ++ P G T+ + + A D DAG NG V Y + P
Sbjct: 222 TCTVRVRVTDENDNSPRLSEERFFLSATENRPPGETVGR-VSATDRDAGPNGRVSYRLPP 280
Query: 54 SQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
+ S F IN PH G+++ R LD E Y + ++A
Sbjct: 281 LE---------------------SDFHIN-PHTGELSTRRVLDRELQATYQLLVIA 314
>gi|148747842|ref|NP_001092077.1| protocadherin-19 precursor [Gallus gallus]
gi|143330542|gb|ABO93197.1| protocadherin 19 [Gallus gallus]
Length = 1086
Score = 37.7 bits (86), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 15/74 (20%)
Query: 36 AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSL 95
A D D G+NG V Y IVPSQ +++ ++Y SIN P+ G + RS
Sbjct: 475 ARDPDLGLNGSVSYQIVPSQVRDMPV--------------FTYVSIN-PNSGDIYALRSF 519
Query: 96 DFEKTQRYLVTIVA 109
+ E+T+ + ++A
Sbjct: 520 NHEQTKAFEFKVLA 533
>gi|392334144|ref|XP_003753090.1| PREDICTED: protocadherin beta-13-like [Rattus norvegicus]
gi|392354647|ref|XP_003751815.1| PREDICTED: protocadherin beta-13-like [Rattus norvegicus]
gi|149017303|gb|EDL76354.1| protocadherin beta 16 (predicted) [Rattus norvegicus]
Length = 800
Score = 37.7 bits (86), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 19/92 (20%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V++ + +P+G I + A D D GVNG + Y + ++ + K
Sbjct: 250 VQIPEDSPIGFLII-TVSATDKDIGVNGEISYSL-------FQVSNDISK---------- 291
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
FSI+ P G+V + LDFEKTQ Y + I A
Sbjct: 292 TFSIH-PLTGEVRLKEHLDFEKTQSYEINIEA 322
>gi|332251712|ref|XP_003274990.1| PREDICTED: cadherin-6 [Nomascus leucogenys]
Length = 790
Score = 37.7 bits (86), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 17/92 (18%)
Query: 19 RVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSY 78
+ + +P G+ I + ++A DAD G N +EY I DG G D V+
Sbjct: 276 KTPESSPPGTPIGR-IKASDADVGENAEIEYSIT----------DGEGLDMFDVI----- 319
Query: 79 FSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ +G +TV + LDFEK + Y + + AS
Sbjct: 320 -TDQETQEGVITVKKLLDFEKKKVYTLKVEAS 350
>gi|195159445|ref|XP_002020589.1| GL15349 [Drosophila persimilis]
gi|194117539|gb|EDW39582.1| GL15349 [Drosophila persimilis]
Length = 1812
Score = 37.7 bits (86), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 46/100 (46%), Gaps = 22/100 (22%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNG-----LVEYFIVPSQDKNIGTADGVGKDR 69
PV +R+S+ T VG+ + N A DAD G NG L+ YF + ++ + T
Sbjct: 1484 PVELRLSEATAVGAVV-HNFTATDADTGTNGELQYRLLRYFPLLNETQEQATP------- 1535
Query: 70 VTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
V VD + G +++ LDFE Q Y + + A
Sbjct: 1536 VFAVDSLT---------GSLSLQAPLDFEAVQEYTLIVQA 1566
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 19/84 (22%)
Query: 26 VGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPH 85
VG+++ + + A D DA NGLVEY I Q D F I+ P
Sbjct: 290 VGTSVLQ-VYASDTDAEENGLVEYAINRRQS-----------------DKEQMFRID-PQ 330
Query: 86 QGQVTVNRSLDFEKTQRYLVTIVA 109
G + +N++LDFE + + + +VA
Sbjct: 331 TGAIFINKALDFETKELHELVVVA 354
>gi|196004380|ref|XP_002112057.1| hypothetical protein TRIADDRAFT_84 [Trichoplax adhaerens]
gi|190585956|gb|EDV26024.1| hypothetical protein TRIADDRAFT_84, partial [Trichoplax adhaerens]
Length = 2004
Score = 37.7 bits (86), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 18/91 (19%)
Query: 19 RVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSY 78
++ + PVG+T+ + + A D D G NG + Y I D G + SY
Sbjct: 327 KIGEDAPVGTTLIQ-MNATDPDHGNNGQITYSI-----------DSFGSPQSN-----SY 369
Query: 79 FSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
F+I+ P + RSLD+E+ + + +TI A
Sbjct: 370 FAID-PKTAVIRTRRSLDYEQQRHHSITIRA 399
>gi|444713187|gb|ELW54095.1| Protocadherin beta-18 [Tupaia chinensis]
Length = 1696
Score = 37.7 bits (86), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 19/92 (20%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V++ + +P+ S + K + A D DAGVNG + Y + V +D +
Sbjct: 249 VQIPENSPLDSLVIK-VSATDLDAGVNGELSY-----------SFSHVSRDIRKI----- 291
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
F I+ P GQV + SLDFE Q Y V I A
Sbjct: 292 -FEIH-PDSGQVYLKASLDFETIQSYTVNIQA 321
>gi|410039500|ref|XP_001158019.3| PREDICTED: LOW QUALITY PROTEIN: cadherin-6 isoform 2 [Pan
troglodytes]
Length = 790
Score = 37.7 bits (86), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 17/92 (18%)
Query: 19 RVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSY 78
+ + +P G+ I + ++A DAD G N +EY I DG G D V+
Sbjct: 276 KTPESSPPGTPIGR-IKASDADVGENAEIEYSIT----------DGEGLDMFDVI----- 319
Query: 79 FSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ +G +TV + LDFEK + Y + + AS
Sbjct: 320 -TDQETQEGIITVKKLLDFEKKKVYTLKVEAS 350
>gi|355691239|gb|EHH26424.1| Kidney cadherin [Macaca mulatta]
gi|355749842|gb|EHH54180.1| Kidney cadherin [Macaca fascicularis]
gi|380808526|gb|AFE76138.1| cadherin-6 preproprotein [Macaca mulatta]
Length = 790
Score = 37.7 bits (86), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 17/92 (18%)
Query: 19 RVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSY 78
+ + +P G+ I + ++A DAD G N +EY I DG G D V+
Sbjct: 276 KTPESSPPGTPIGR-IKASDADVGENAEIEYSIT----------DGEGLDMFDVI----- 319
Query: 79 FSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ +G +TV + LDFEK + Y + + AS
Sbjct: 320 -TDQETQEGIITVKKLLDFEKKKVYTLKVEAS 350
>gi|426350311|ref|XP_004042722.1| PREDICTED: protocadherin beta-4 [Gorilla gorilla gorilla]
Length = 795
Score = 37.7 bits (86), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 15/78 (19%)
Query: 33 NLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVN 92
++RA D D+G N V Y ++PSQD ++ A S SIN G +
Sbjct: 471 SVRATDRDSGTNAQVTYSLLPSQDPHLPLA--------------SLVSINA-DNGHLFAL 515
Query: 93 RSLDFEKTQRYLVTIVAS 110
RSLD+E Q + + AS
Sbjct: 516 RSLDYEALQAFEFRVGAS 533
>gi|73949399|ref|XP_849349.1| PREDICTED: protocadherin gamma-B1 [Canis lupus familiaris]
Length = 818
Score = 37.7 bits (86), Expect = 0.95, Method: Composition-based stats.
Identities = 29/112 (25%), Positives = 52/112 (46%), Gaps = 27/112 (24%)
Query: 5 VKVSNRKRTIPVI------VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEY-FIVPSQDK 57
++V++ PV V + + P G+++ + + A D D GVN + Y F+
Sbjct: 228 IQVTDANDNAPVFSQDTYRVSLQENVPWGTSLLQ-VMATDQDEGVNAEITYAFLSAPTST 286
Query: 58 NIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
++ F++N P+ G +T N +LDFEKT RY++ + A
Sbjct: 287 SL------------------LFNLN-PNTGDITTNGTLDFEKTSRYMLVVEA 319
>gi|321458298|gb|EFX69368.1| hypothetical protein DAPPUDRAFT_329129 [Daphnia pulex]
Length = 5030
Score = 37.7 bits (86), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 20/82 (24%)
Query: 29 TIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQ 88
T+ +L A DAD+ NG+++Y I+ G GKD +F+I+ G
Sbjct: 3271 TLVMDLEAFDADSAKNGIIQYSII----------GGNGKD---------FFTID-SETGV 3310
Query: 89 VTVNRSLDFEKTQRYLVTIVAS 110
VT S DFE+ Y + ++AS
Sbjct: 3311 VTTKSSFDFEEKNYYELDVLAS 3332
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 21/96 (21%)
Query: 14 IPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVV 73
+P +VS+ V + +F+ + A DAD +NG + Y+I +G G + +
Sbjct: 1235 VPYKTQVSEGAAVDTQVFR-VVATDADDQLNGGIFYYIT----------EGNGDHKFRID 1283
Query: 74 DGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
+ GQ+ +NR+LD E + RY +TI A
Sbjct: 1284 EA----------SGQIVLNRALDRETSDRYTLTIGA 1309
Score = 34.7 bits (78), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 48/110 (43%), Gaps = 27/110 (24%)
Query: 7 VSNRKRTIPVIVRVS------DLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIG 60
V+ R P+ +S + P+GS I ++ A D D+G NG+V Y IV ++N
Sbjct: 3139 VTGENRHTPIFTALSYQIIVQENEPLGSIIV-SVTASDNDSGPNGVVHYAIVSGNEENKF 3197
Query: 61 TADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
D P+ G ++V +LDF+ ++ + I A+
Sbjct: 3198 LID--------------------PNTGDISVANTLDFDTLPKFTLNITAT 3227
>gi|301613239|ref|XP_002936117.1| PREDICTED: cadherin-7-like [Xenopus (Silurana) tropicalis]
Length = 783
Score = 37.7 bits (86), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 17/91 (18%)
Query: 20 VSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYF 79
V + P+GST+ K ++A DAD GVN +EY I+ G DG+ K VD +
Sbjct: 271 VPESLPIGSTVAK-IKADDADIGVNAEMEYKILD------GDVDGMFK---ITVDKDT-- 318
Query: 80 SINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+G +T + LD+E Y + I AS
Sbjct: 319 -----QEGIITTKQELDYESKTSYTLRIEAS 344
>gi|390342985|ref|XP_798777.3| PREDICTED: cadherin-23-like, partial [Strongylocentrotus purpuratus]
Length = 3673
Score = 37.7 bits (86), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 21/93 (22%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V +++ P+G I N AVD D G NG+V+Y I+P+ D YS
Sbjct: 2788 VFITENNPLGLLII-NAFAVDDDVGANGVVDYSILPNFD-------------------YS 2827
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F+I+ P G +T+ S D E Y +T+VA+
Sbjct: 2828 DFTID-PVTGDITILVSADREIKDSYTLTVVAT 2859
>gi|326429811|gb|EGD75381.1| cadherin [Salpingoeca sp. ATCC 50818]
Length = 3697
Score = 37.7 bits (86), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 21/93 (22%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V +++ P+G +F + A DADAG N + Y IV G +DR + D
Sbjct: 2843 VSLAESRPLGR-VFAGISATDADAGANAAITYAIV----------GGNEEDRFAIDD--- 2888
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
G++++ SL+FE T Y++T+ AS
Sbjct: 2889 -------VTGELSLVASLNFEATTSYVLTVQAS 2914
>gi|301607896|ref|XP_002933536.1| PREDICTED: protocadherin-23-like [Xenopus (Silurana) tropicalis]
Length = 3303
Score = 37.7 bits (86), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 21/92 (22%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V V + P+ STI + A D+D G N + Y IV D+N+ T D
Sbjct: 2609 VSVREHYPLKSTIII-ISATDSDTGENADITYSIVSGNDENVFTIDA------------- 2654
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
G VT+ + LD+E+T +Y +T+ A
Sbjct: 2655 -------QNGTVTLVQPLDYEETMKYSLTLQA 2679
>gi|291395191|ref|XP_002714142.1| PREDICTED: cadherin 6, type 2 preproprotein-like [Oryctolagus
cuniculus]
Length = 790
Score = 37.7 bits (86), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 17/92 (18%)
Query: 19 RVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSY 78
+ + +P G+ I + ++A DAD G N +EY I DG G D V+
Sbjct: 276 KTPESSPPGTPIGR-IKASDADMGENAEIEYSIT----------DGEGLDMFDVI----- 319
Query: 79 FSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ +G +TV + LDFEK + Y + + AS
Sbjct: 320 -TDQETQEGIITVKKLLDFEKQKVYTLKVEAS 350
>gi|74228343|dbj|BAE24021.1| unnamed protein product [Mus musculus]
Length = 874
Score = 37.7 bits (86), Expect = 0.96, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 15/69 (21%)
Query: 33 NLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVN 92
+L A D D+G+N L+ Y ++ +++++ + S+ S+N P G V
Sbjct: 479 SLAASDPDSGLNALISYSLLEPRNRDVSAS--------------SFISLN-PQTGAVHAT 523
Query: 93 RSLDFEKTQ 101
RS D+E+TQ
Sbjct: 524 RSFDYEQTQ 532
>gi|410948361|ref|XP_003980909.1| PREDICTED: protocadherin gamma-C4 [Felis catus]
Length = 851
Score = 37.7 bits (86), Expect = 0.96, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 15/69 (21%)
Query: 33 NLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVN 92
+L A D D+G+N L+ Y ++ +++++ + S+ S+N P G V
Sbjct: 476 SLAASDPDSGLNALISYSLLEPRNRDVSAS--------------SFISLN-PQTGAVHAT 520
Query: 93 RSLDFEKTQ 101
RS D+E+TQ
Sbjct: 521 RSFDYEQTQ 529
>gi|195325660|gb|ACF95738.1| protocadherin-19 [Mustela putorius furo]
Length = 965
Score = 37.7 bits (86), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 15/74 (20%)
Query: 36 AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSL 95
A D D G+NG V Y IVPSQ +++ ++Y SIN P+ G + RS
Sbjct: 444 ARDPDLGLNGSVSYQIVPSQVRDMPV--------------FTYVSIN-PNSGDIYALRSF 488
Query: 96 DFEKTQRYLVTIVA 109
+ E+T+ + ++A
Sbjct: 489 NHEQTKAFEFKVLA 502
>gi|126320889|ref|XP_001364843.1| PREDICTED: cadherin-6 [Monodelphis domestica]
Length = 790
Score = 37.7 bits (86), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 21/87 (24%)
Query: 24 TPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINL 83
TP+G ++A+DAD G N +EY I +G G D V+ +
Sbjct: 285 TPIG-----RIKAIDADVGENAEIEYSIT----------EGEGLDMFDVI------TDQE 323
Query: 84 PHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+G +TV + LDFEK + Y + + AS
Sbjct: 324 TQEGIITVKKVLDFEKKKLYTLKVEAS 350
>gi|449498420|ref|XP_004175825.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-19 [Taeniopygia
guttata]
Length = 1012
Score = 37.7 bits (86), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 15/74 (20%)
Query: 36 AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSL 95
A D D G+NG V Y IVPSQ +++ ++Y SIN P+ G + RS
Sbjct: 425 ARDPDLGLNGSVSYQIVPSQVRDMPV--------------FTYVSIN-PNSGDIYALRSF 469
Query: 96 DFEKTQRYLVTIVA 109
+ E+T+ + ++A
Sbjct: 470 NHEQTKAFEFKVLA 483
>gi|353231968|emb|CCD79323.1| putative cadherin [Schistosoma mansoni]
Length = 3738
Score = 37.7 bits (86), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 23/92 (25%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
+R+S+L P+G + + L+A+ D G N ++ Y ++ Q + G + T
Sbjct: 1545 IRISELAPIGERLTR-LKAISQDEGDNAVIHYRLLTKQPE-------FGLNETT------ 1590
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
G + + + LD+E+T Y +TI A
Sbjct: 1591 ---------GDLWLQKPLDYEQTSAYFLTIEA 1613
>gi|326927331|ref|XP_003209846.1| PREDICTED: neural-cadherin-like [Meleagris gallopavo]
Length = 2531
Score = 37.7 bits (86), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Query: 12 RTIPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIV 52
+ P + VS G+ ++K L AVDAD G+NG VEYF++
Sbjct: 13 KPFPFLAVVSPQATEGTEVYK-LLAVDADEGINGTVEYFLL 52
>gi|256075218|ref|XP_002573917.1| hypothetical protein [Schistosoma mansoni]
Length = 3738
Score = 37.7 bits (86), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 23/92 (25%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
+R+S+L P+G + + L+A+ D G N ++ Y ++ Q + G + T
Sbjct: 1545 IRISELAPIGERLTR-LKAISQDEGDNAVIHYRLLTKQPE-------FGLNETT------ 1590
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
G + + + LD+E+T Y +TI A
Sbjct: 1591 ---------GDLWLQKPLDYEQTSAYFLTIEA 1613
>gi|332244197|ref|XP_003271259.1| PREDICTED: cadherin-23-like isoform 1 [Nomascus leucogenys]
Length = 1122
Score = 37.7 bits (86), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 54/133 (40%), Gaps = 47/133 (35%)
Query: 1 LTCTVKVSN-----RKRTIPVIVRVSDLT-------------------PVGSTIFKNLRA 36
L TV+ S+ R IPV + + D+ PVG TI + A
Sbjct: 128 LNFTVRASDNGSPPRAAEIPVYLEIMDINDNNPIFDQPSYQEAVFEDVPVG-TIILTVTA 186
Query: 37 VDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSLD 96
DAD+G L+EY ++ DG S F+IN P G + V SLD
Sbjct: 187 TDADSGNFALIEY---------------------SLGDGESKFAIN-PTTGDIYVLSSLD 224
Query: 97 FEKTQRYLVTIVA 109
EK Y++T +A
Sbjct: 225 REKKDHYILTALA 237
>gi|301753513|ref|XP_002912643.1| PREDICTED: protocadherin gamma-B1-like [Ailuropoda melanoleuca]
Length = 826
Score = 37.7 bits (86), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 21/93 (22%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEY-FIVPSQDKNIGTADGVGKDRVTVVDGY 76
V + + P G+++ + + A D D GVN + Y F+ ++
Sbjct: 249 VSLQENVPSGTSVLQ-VMATDQDEGVNAEITYAFLSAPTSTSL----------------- 290
Query: 77 SYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
F++N P+ G +T N +LDFEKT RY++ + A
Sbjct: 291 -LFNLN-PNTGDITTNGTLDFEKTSRYMLVVEA 321
>gi|18087749|ref|NP_291060.1| protocadherin gamma-C4 [Mus musculus]
gi|13876362|gb|AAK26101.1| protocadherin gamma C4 [Mus musculus]
gi|40673932|gb|AAH64808.1| Protocadherin gamma subfamily C, 4 [Mus musculus]
gi|148678188|gb|EDL10135.1| mCG133388, isoform CRA_r [Mus musculus]
Length = 941
Score = 37.7 bits (86), Expect = 0.99, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 15/69 (21%)
Query: 33 NLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVN 92
+L A D D+G+N L+ Y ++ +++++ + S+ S+N P G V
Sbjct: 479 SLAASDPDSGLNALISYSLLEPRNRDVSAS--------------SFISLN-PQTGAVHAT 523
Query: 93 RSLDFEKTQ 101
RS D+E+TQ
Sbjct: 524 RSFDYEQTQ 532
>gi|149726256|ref|XP_001504114.1| PREDICTED: protocadherin beta-14-like [Equus caballus]
Length = 798
Score = 37.7 bits (86), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 45/94 (47%), Gaps = 21/94 (22%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEY-FIVPSQDKNIGTADGVGKDRVTVVDGY 76
V+V + TP+GS I + A D DAG G + Y F+ S+D R T
Sbjct: 249 VQVLEDTPIGSWII-TISAKDLDAGNYGKISYTFLHASEDI-----------RKT----- 291
Query: 77 SYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F IN P G V + SLDFE TQ Y + I A+
Sbjct: 292 --FEIN-PASGDVHLRSSLDFEVTQSYTINIQAT 322
>gi|402872852|ref|XP_003919612.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin gamma-C4 [Papio
anubis]
Length = 868
Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 15/69 (21%)
Query: 33 NLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVN 92
+L A D D+G+N L+ Y ++ +++++ + S+ S+N P G V
Sbjct: 476 SLAASDPDSGLNALISYSLLEPRNRDVSAS--------------SFISLN-PQTGAVHAT 520
Query: 93 RSLDFEKTQ 101
RS D+E+TQ
Sbjct: 521 RSFDYEQTQ 529
>gi|12652559|gb|AAH00019.1| CDH6 protein [Homo sapiens]
gi|119631170|gb|EAX10765.1| cadherin 6, type 2, K-cadherin (fetal kidney), isoform CRA_c [Homo
sapiens]
Length = 663
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 17/92 (18%)
Query: 19 RVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSY 78
+ + +P G+ I + ++A DAD G N +EY I DG G D V+
Sbjct: 276 KTPESSPPGTPIGR-IKASDADVGENAEIEYSIT----------DGEGLDMFDVI----- 319
Query: 79 FSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ +G +TV + LDFEK + Y + + AS
Sbjct: 320 -TDQETQEGIITVKKLLDFEKKKVYTLKVEAS 350
>gi|444725570|gb|ELW66133.1| Cadherin-6 [Tupaia chinensis]
Length = 790
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 17/92 (18%)
Query: 19 RVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSY 78
+ + +P G+ I + ++A DAD G N +EY I DG G D V+
Sbjct: 276 KTPESSPPGTPIGR-IKASDADVGENAEIEYSIT----------DGEGLDMFDVI----- 319
Query: 79 FSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ +G +TV + LDFEK + Y + + AS
Sbjct: 320 -TDQETQEGIITVKKLLDFEKKKVYTLKVEAS 350
>gi|432907406|ref|XP_004077628.1| PREDICTED: cadherin-23-like [Oryzias latipes]
Length = 1749
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 21/94 (22%)
Query: 17 IVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGY 76
++ V + +P G+ + RAVDAD G N +V YFI G +DG
Sbjct: 1119 VLSVPEQSPPGTIVGNVTRAVDADEGSNAIVFYFIAG------GNSDG------------ 1160
Query: 77 SYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F ++L +G++ V + LD E T Y + I AS
Sbjct: 1161 -NFGLSL--EGELRVLKELDREVTPSYSIIIKAS 1191
>gi|345548553|gb|AEO12553.1| Lefftyrin, partial [Oscarella carmela]
Length = 14757
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 51/112 (45%), Gaps = 29/112 (25%)
Query: 5 VKVSNRKRTIPVIVR------VSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKN 58
V VS+ PV V + + +P G+ + A D D G NGLV Y +
Sbjct: 2740 VTVSDENDNTPVFVNAVRNISLREDSPRGTEV-ATFTATDRDIGNNGLVTY--------S 2790
Query: 59 IGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
G+ + F+IN G V ++RSLDFEKTQRY + ++AS
Sbjct: 2791 FGSF-------------LAEFNIN-GSTGVVVLSRSLDFEKTQRYDLDVIAS 2828
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 21/94 (22%)
Query: 17 IVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGY 76
+ +++ VG +F +RA DAD G NGLV Y I G DG
Sbjct: 6207 LASIAENASVGDLVF-TVRANDADEGTNGLVSYSI------RSGNRDG------------ 6247
Query: 77 SYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F+++ + GQ+ V + LD E Y++TI+AS
Sbjct: 6248 -QFTVDHSN-GQIAVLKPLDREAVNSYVLTILAS 6279
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 43/90 (47%), Gaps = 21/90 (23%)
Query: 20 VSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYF 79
VS+ VG+++ + ++A D D G+N LV Y V + N+G A F
Sbjct: 1008 VSESFSVGTSVVQ-VKATDLDTGLNALVSYSFV---NGNVGQA----------------F 1047
Query: 80 SINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
IN G VTV SLDFE Y +TI A
Sbjct: 1048 GIN-SSNGLVTVAASLDFETRPAYSLTIEA 1076
Score = 35.0 bits (79), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 42/93 (45%), Gaps = 23/93 (24%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V VS+ VGST+F A D D G N +V Y IV G S
Sbjct: 10223 VSVSEDVDVGSTVF-TASAADNDEGRNAIVVYEIV---------------------SGSS 10260
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F+IN G+VTV SLD E +++TI AS
Sbjct: 10261 SFAINT-TAGEVTVINSLDREVQSNFVLTIRAS 10292
Score = 34.3 bits (77), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 20/75 (26%)
Query: 36 AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSL 95
A D DAG N V+Y I G A+G FS+N P G++ NR+L
Sbjct: 5106 ATDNDAGTNAFVKYSITE------GNANGT-------------FSVN-PFLGEIETNRAL 5145
Query: 96 DFEKTQRYLVTIVAS 110
D E Y + ++A+
Sbjct: 5146 DRENVAAYSLKVLAT 5160
>gi|397495449|ref|XP_003818567.1| PREDICTED: cadherin-6 [Pan paniscus]
gi|410224428|gb|JAA09433.1| cadherin 6, type 2, K-cadherin (fetal kidney) [Pan troglodytes]
Length = 790
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 17/92 (18%)
Query: 19 RVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSY 78
+ + +P G+ I + ++A DAD G N +EY I DG G D V+
Sbjct: 276 KTPESSPPGTPIGR-IKASDADVGENAEIEYSIT----------DGEGLDMFDVI----- 319
Query: 79 FSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ +G +TV + LDFEK + Y + + AS
Sbjct: 320 -TDQETQEGIITVKKLLDFEKKKVYTLKVEAS 350
>gi|281345413|gb|EFB20997.1| hypothetical protein PANDA_000354 [Ailuropoda melanoleuca]
Length = 2272
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 21/93 (22%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEY-FIVPSQDKNIGTADGVGKDRVTVVDGY 76
V + + P G+++ + + A D D GVN + Y F+ ++
Sbjct: 971 VSLQENVPSGTSVLQ-VMATDQDEGVNAEITYAFLSAPTSTSL----------------- 1012
Query: 77 SYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
F++N P+ G +T N +LDFEKT RY++ + A
Sbjct: 1013 -LFNLN-PNTGDITTNGTLDFEKTSRYMLVVEA 1043
>gi|119574811|gb|EAW54426.1| cadherin-like 23, isoform CRA_a [Homo sapiens]
gi|119574812|gb|EAW54427.1| cadherin-like 23, isoform CRA_a [Homo sapiens]
Length = 1781
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 40/85 (47%), Gaps = 23/85 (27%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
PVG TI + A DAD+G L+EY ++ DG S F+IN P
Sbjct: 843 PVG-TIILTVTATDADSGNFALIEY---------------------SLGDGESKFAIN-P 879
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVA 109
G + V SLD EK Y++T +A
Sbjct: 880 TTGDIYVLSSLDREKKDHYILTALA 904
>gi|47223231|emb|CAF98615.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1372
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 29/102 (28%)
Query: 18 VRVSDLTPVGSTIFK----NLRAVDADAGVNGLVEYFIV-----PSQDKNIGTADGVGKD 68
V V++LTPVG+TIF N A D D G NG +EY I+ P ++ + + +
Sbjct: 122 VAVNELTPVGTTIFTGFSGNNGATDIDDGPNGHIEYSILYNPNDPESNRTVSVGNTLS-- 179
Query: 69 RVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
G + + L++E+ RYLV + A+
Sbjct: 180 ------------------GYIILAERLNYEERTRYLVVVQAN 203
>gi|410260548|gb|JAA18240.1| cadherin 6, type 2, K-cadherin (fetal kidney) [Pan troglodytes]
gi|410289524|gb|JAA23362.1| cadherin 6, type 2, K-cadherin (fetal kidney) [Pan troglodytes]
gi|410330019|gb|JAA33956.1| cadherin 6, type 2, K-cadherin (fetal kidney) [Pan troglodytes]
Length = 790
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 17/92 (18%)
Query: 19 RVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSY 78
+ + +P G+ I + ++A DAD G N +EY I DG G D V+
Sbjct: 276 KTPESSPPGTPIGR-IKASDADVGENAEIEYSIT----------DGEGLDMFDVI----- 319
Query: 79 FSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ +G +TV + LDFEK + Y + + AS
Sbjct: 320 -TDQETQEGIITVKKLLDFEKKKVYTLKVEAS 350
>gi|296194856|ref|XP_002745137.1| PREDICTED: cadherin-6 isoform 2 [Callithrix jacchus]
Length = 790
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 17/92 (18%)
Query: 19 RVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSY 78
+ + +P G+ I + ++A DAD G N +EY I DG G D V+
Sbjct: 276 KTPESSPPGTPIGR-IKASDADVGENAEIEYSIT----------DGEGLDMFHVI----- 319
Query: 79 FSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ +G +TV + LDFEK + Y + + AS
Sbjct: 320 -TDQETQEGIITVKKLLDFEKKKVYTLKVEAS 350
>gi|432933149|ref|XP_004081829.1| PREDICTED: protocadherin-8-like [Oryzias latipes]
Length = 965
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 42/93 (45%), Gaps = 18/93 (19%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V +++ PVG + + + A D D GVNG V Y +GT R+ VD
Sbjct: 248 VELNEDAPVGHRVLR-VHAFDPDDGVNGEVVY--------ALGTGVSTEAARIFHVDS-- 296
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
H G VT+ +DFEK + Y + I AS
Sbjct: 297 -------HSGDVTLKARVDFEKRRSYELKIRAS 322
>gi|395817369|ref|XP_003782144.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-12 [Otolemur
garnettii]
Length = 1185
Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 31/84 (36%), Positives = 40/84 (47%), Gaps = 23/84 (27%)
Query: 29 TIFKNLRAVDADAGVNGLVEYFI---VPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPH 85
T+ NL A D D G NG VE+F+ VP + V+D FSI+
Sbjct: 261 TLLINLTATDPDQGPNGEVEFFLSKHVPPE----------------VLDT---FSID-AK 300
Query: 86 QGQVTVNRSLDFEKTQRYLVTIVA 109
GQV + RSLD+EK Y V + A
Sbjct: 301 TGQVILLRSLDYEKNPAYEVDVQA 324
>gi|348520342|ref|XP_003447687.1| PREDICTED: protocadherin-12 [Oreochromis niloticus]
Length = 1166
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 41/93 (44%), Gaps = 18/93 (19%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V + + T +G+T+ K L+A D D G NG VEY + R+ VD
Sbjct: 245 VSLPEDTALGTTVIK-LKATDPDQGANGEVEYSFSKHTHPEV--------QRLFYVD--- 292
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
P G+V++ LD+E Y V + AS
Sbjct: 293 ------PQTGEVSIRAPLDYEAQSSYEVIVQAS 319
>gi|410913715|ref|XP_003970334.1| PREDICTED: uncharacterized protein LOC101073688 [Takifugu rubripes]
Length = 3967
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 18/93 (19%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V + + PVG+T+ K + A+D D G NG +EY + + + I Y+
Sbjct: 2625 VEIYENVPVGTTVTK-VSAIDPDEGANGEIEYSLSEAIHQKI----------------YN 2667
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F ++ GQ+ + LD+E+++ Y + I AS
Sbjct: 2668 LFELD-SLTGQIKLKGMLDYEESETYKLDIEAS 2699
Score = 34.7 bits (78), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 18/93 (19%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
+ +++ P G+TI ++A+D D G NG VEY +G A + +DG S
Sbjct: 3429 IEINENVPAGTTI-TTVKAIDPDEGSNGEVEY--------TLGEAPTRKIYDIFEIDGVS 3479
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
G++ + LDFE+T Y + I AS
Sbjct: 3480 ---------GRIILKGVLDFEETSIYKLDIEAS 3503
>gi|328778418|ref|XP_624236.3| PREDICTED: protocadherin-like wing polarity protein stan-like [Apis
mellifera]
Length = 3163
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 43/86 (50%), Gaps = 12/86 (13%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
PVGST+ ++A D DAG N VEY I+ S + GTA+ + F I+ P
Sbjct: 380 PVGSTVV-TVKATDQDAGRNAEVEYSIL-STTSSSGTAN---------TEDALIFRID-P 427
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVAS 110
G VT LD EKT+ Y V + S
Sbjct: 428 RTGVVTTRTPLDREKTEVYTVILSVS 453
>gi|119631168|gb|EAX10763.1| cadherin 6, type 2, K-cadherin (fetal kidney), isoform CRA_a [Homo
sapiens]
Length = 386
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 17/92 (18%)
Query: 19 RVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSY 78
+ + +P G+ I + ++A DAD G N +EY I DG G D V+
Sbjct: 197 KTPESSPPGTPIGR-IKASDADVGENAEIEYSIT----------DGEGLDMFDVI----- 240
Query: 79 FSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ +G +TV + LDFEK + Y + + AS
Sbjct: 241 -TDQETQEGIITVKKLLDFEKKKVYTLKVEAS 271
>gi|157113610|ref|XP_001652021.1| protocadherin [Aedes aegypti]
gi|108877667|gb|EAT41892.1| AAEL006534-PA, partial [Aedes aegypti]
Length = 1647
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 21/95 (22%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P V++S+ + +G+ + + + DAD G+NG V Y+I A+G +R + D
Sbjct: 1126 PYKVQISEGSSIGTQLIR-VYTNDADEGLNGDVFYYI----------AEGNSDERFVIDD 1174
Query: 75 GYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
GQ+T+ ++LD E Y +TIVA
Sbjct: 1175 A----------TGQITLAKALDRETVSMYKLTIVA 1199
>gi|4826673|ref|NP_004923.1| cadherin-6 preproprotein [Homo sapiens]
gi|1705545|sp|P55285.1|CADH6_HUMAN RecName: Full=Cadherin-6; AltName: Full=Kidney cadherin;
Short=K-cadherin; Flags: Precursor
gi|974185|dbj|BAA06562.1| cadherin-6 [Homo sapiens]
gi|119631169|gb|EAX10764.1| cadherin 6, type 2, K-cadherin (fetal kidney), isoform CRA_b [Homo
sapiens]
gi|158256016|dbj|BAF83979.1| unnamed protein product [Homo sapiens]
Length = 790
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 17/92 (18%)
Query: 19 RVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSY 78
+ + +P G+ I + ++A DAD G N +EY I DG G D V+
Sbjct: 276 KTPESSPPGTPIGR-IKASDADVGENAEIEYSIT----------DGEGLDMFDVI----- 319
Query: 79 FSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ +G +TV + LDFEK + Y + + AS
Sbjct: 320 -TDQETQEGIITVKKLLDFEKKKVYTLKVEAS 350
>gi|426350358|ref|XP_004042744.1| PREDICTED: protocadherin gamma-C4 [Gorilla gorilla gorilla]
Length = 871
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 15/69 (21%)
Query: 33 NLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVN 92
+L A D D+G+N L+ Y ++ +++++ + S+ S+N P G V
Sbjct: 476 SLAASDPDSGLNALISYSLLEPRNRDVSAS--------------SFISLN-PQTGAVHAT 520
Query: 93 RSLDFEKTQ 101
RS D+E+TQ
Sbjct: 521 RSFDYEQTQ 529
>gi|426231057|ref|XP_004009562.1| PREDICTED: protocadherin gamma-B5 [Ovis aries]
Length = 805
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 16/93 (17%)
Query: 17 IVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGY 76
+V V + P G++I + +RA D D G NG V Y IV S + +
Sbjct: 454 VVHVPENNPPGASI-EQVRASDPDLGPNGHVSYSIVASDLEPRALS-------------- 498
Query: 77 SYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
SY S+N P G V R+ D E+ + + +T+ A
Sbjct: 499 SYVSVN-PQSGVVFAQRAFDHEQLRAFELTLQA 530
>gi|14277682|ref|NP_115782.1| protocadherin gamma-C4 isoform 2 precursor [Homo sapiens]
gi|5457098|gb|AAD43785.1|AF152525_1 protocadherin gamma C4 short form protein [Homo sapiens]
gi|71680343|gb|AAI01036.1| Protocadherin gamma subfamily C, 4 [Homo sapiens]
gi|72533492|gb|AAI01039.1| Protocadherin gamma subfamily C, 4 [Homo sapiens]
gi|119582350|gb|EAW61946.1| hCG1982215, isoform CRA_y [Homo sapiens]
Length = 871
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 15/69 (21%)
Query: 33 NLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVN 92
+L A D D+G+N L+ Y ++ +++++ + S+ S+N P G V
Sbjct: 476 SLAASDPDSGLNALISYSLLEPRNRDVSAS--------------SFISLN-PQTGAVHAT 520
Query: 93 RSLDFEKTQ 101
RS D+E+TQ
Sbjct: 521 RSFDYEQTQ 529
>gi|11128025|ref|NP_061751.1| protocadherin gamma-C4 isoform 1 precursor [Homo sapiens]
gi|37999827|sp|Q9Y5F7.1|PCDGL_HUMAN RecName: Full=Protocadherin gamma-C4; Short=PCDH-gamma-C4; Flags:
Precursor
gi|62510856|sp|Q5DRA3.1|PCDGL_PANTR RecName: Full=Protocadherin gamma-C4; Short=PCDH-gamma-C4; Flags:
Precursor
gi|5456982|gb|AAD43732.1| protocadherin gamma C4 [Homo sapiens]
gi|119582353|gb|EAW61949.1| hCG1982215, isoform CRA_ab [Homo sapiens]
Length = 938
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 15/69 (21%)
Query: 33 NLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVN 92
+L A D D+G+N L+ Y ++ +++++ + S+ S+N P G V
Sbjct: 476 SLAASDPDSGLNALISYSLLEPRNRDVSAS--------------SFISLN-PQTGAVHAT 520
Query: 93 RSLDFEKTQ 101
RS D+E+TQ
Sbjct: 521 RSFDYEQTQ 529
>gi|395817387|ref|XP_003782153.1| PREDICTED: protocadherin gamma-C4 [Otolemur garnettii]
Length = 832
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 15/69 (21%)
Query: 33 NLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVN 92
+L A D D+G+N L+ Y ++ +++++ + S+ S+N P G V
Sbjct: 476 SLAASDPDSGLNALISYSLLEPRNRDVSAS--------------SFISLN-PQTGAVHAT 520
Query: 93 RSLDFEKTQ 101
RS D+E+TQ
Sbjct: 521 RSFDYEQTQ 529
>gi|348582944|ref|XP_003477236.1| PREDICTED: protocadherin gamma-C4-like [Cavia porcellus]
Length = 869
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 15/69 (21%)
Query: 33 NLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVN 92
+L A D D+G+N L+ Y ++ +++++ + S+ S+N P G V
Sbjct: 476 SLAASDPDSGLNALISYSLLEPRNRDVSAS--------------SFISLN-PQTGAVHAT 520
Query: 93 RSLDFEKTQ 101
RS D+E+TQ
Sbjct: 521 RSFDYEQTQ 529
>gi|347543909|gb|AEP02527.1| CDH23, partial [Chaerephon plicatus]
Length = 3209
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 44/96 (45%), Gaps = 23/96 (23%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P VR+ + TPVG+ IF + A D D G G V Y P
Sbjct: 128 PYSVRIPENTPVGTPIFI-VNATDPDLGAGGSVLYSFQPPS------------------- 167
Query: 75 GYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+F+I+ +G VTV + LD+E TQ Y +T+ A+
Sbjct: 168 --PFFAID-SARGIVTVIQELDYEITQAYQLTVNAT 200
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 46/94 (48%), Gaps = 21/94 (22%)
Query: 14 IPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVV 73
+P+ V +S+ +PV S + + L A DAD+G N L+ + I ++R
Sbjct: 1844 LPMNVTISENSPVSSFVARIL-ASDADSGCNALLTFNITAGN-----------RERA--- 1888
Query: 74 DGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTI 107
FSIN G VTVNR LD E+ Y +TI
Sbjct: 1889 -----FSINA-TTGIVTVNRPLDRERIPEYKLTI 1916
Score = 34.7 bits (78), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 39/85 (45%), Gaps = 23/85 (27%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
PVG+ I + A DAD+G L+EY + DG GK F+IN P
Sbjct: 2406 PVGTVILT-VTATDADSGNFALIEYSL----------GDGEGK-----------FAIN-P 2442
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVA 109
G + V LD EK Y++T +A
Sbjct: 2443 TTGDIYVLSPLDREKKDHYILTALA 2467
Score = 34.7 bits (78), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Query: 12 RTIPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFI---VPSQDKNIGTADGV 65
+ +P + V + TP G ++++ + AVD D G+NGLV Y + +P D I ++ GV
Sbjct: 881 QNLPFVAEVLEGTPAGVSVYQ-VVAVDLDEGLNGLVSYRMQVGMPRMDFLINSSSGV 936
Score = 34.3 bits (77), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 18/94 (19%)
Query: 17 IVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGY 76
I+ + + P+ S +++ + A D D G+NG V Y + K G D +
Sbjct: 2609 ILHIREEIPLRSNVYE-VYATDKDEGLNGAVRYSFL----KTTGNRD------------W 2651
Query: 77 SYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
YF+I+ P G + + LD EK Y + +VAS
Sbjct: 2652 EYFTID-PVSGLIQTAQRLDREKQALYSLILVAS 2684
>gi|345793799|ref|XP_003433807.1| PREDICTED: protocadherin gamma-C4 [Canis lupus familiaris]
Length = 856
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 15/69 (21%)
Query: 33 NLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVN 92
+L A D D+G+N L+ Y ++ +++++ + S+ S+N P G V
Sbjct: 476 SLAASDPDSGLNALISYSLLEPRNRDVSAS--------------SFISLN-PQTGAVHAT 520
Query: 93 RSLDFEKTQ 101
RS D+E+TQ
Sbjct: 521 RSFDYEQTQ 529
>gi|444713193|gb|ELW54101.1| Protocadherin gamma-B2 [Tupaia chinensis]
Length = 759
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 54/115 (46%), Gaps = 22/115 (19%)
Query: 1 LTCTVKVSNRKRTIPV------IVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPS 54
++ T++VS+ +PV +V V + P G++I + + A D D G NG V Y IV S
Sbjct: 436 ISITLRVSDVNDNVPVFQQASYLVHVPENNPPGASIAQ-VSASDPDLGPNGHVSYSIVAS 494
Query: 55 QDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
+ + SY S+N P G V R+ D E+ + + +T+ A
Sbjct: 495 DLEPRALS--------------SYVSVN-PQSGVVFAQRAFDHEQLRAFELTLQA 534
>gi|426229752|ref|XP_004023519.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin gamma-C4 [Ovis aries]
Length = 865
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 15/69 (21%)
Query: 33 NLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVN 92
+L A D D+G+N L+ Y ++ +++++ + S+ S+N P G V
Sbjct: 476 SLAASDPDSGLNALISYSLLEPRNRDVSAS--------------SFISLN-PQTGAVHAT 520
Query: 93 RSLDFEKTQ 101
RS D+E+TQ
Sbjct: 521 RSFDYEQTQ 529
>gi|284925134|ref|NP_001165404.1| cadherin-23 isoform 6 [Homo sapiens]
gi|50254112|gb|AAT72165.1| cadherin 23 isoform B1 [Homo sapiens]
Length = 1114
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 40/85 (47%), Gaps = 23/85 (27%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
PVG TI + A DAD+G L+EY ++ DG S F+IN P
Sbjct: 176 PVG-TIILTVTATDADSGNFALIEY---------------------SLGDGESKFAIN-P 212
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVA 109
G + V SLD EK Y++T +A
Sbjct: 213 TTGDIYVLSSLDREKKDHYILTALA 237
>gi|403255734|ref|XP_003920566.1| PREDICTED: protocadherin gamma-C4-like isoform 2 [Saimiri
boliviensis boliviensis]
Length = 938
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 15/69 (21%)
Query: 33 NLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVN 92
+L A D D+G+N L+ Y ++ +++++ + S+ S+N P G V
Sbjct: 476 SLAASDPDSGLNALISYSLLEPRNRDVSAS--------------SFISLN-PQTGAVHAT 520
Query: 93 RSLDFEKTQ 101
RS D+E+TQ
Sbjct: 521 RSFDYEQTQ 529
>gi|397517980|ref|XP_003829180.1| PREDICTED: protocadherin gamma-C4 [Pan paniscus]
Length = 871
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 15/69 (21%)
Query: 33 NLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVN 92
+L A D D+G+N L+ Y ++ +++++ + S+ S+N P G V
Sbjct: 476 SLAASDPDSGLNALISYSLLEPRNRDVSAS--------------SFISLN-PQTGAVHAT 520
Query: 93 RSLDFEKTQ 101
RS D+E+TQ
Sbjct: 521 RSFDYEQTQ 529
>gi|395736301|ref|XP_003776733.1| PREDICTED: protocadherin gamma-C4 [Pongo abelii]
Length = 871
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 15/69 (21%)
Query: 33 NLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVN 92
+L A D D+G+N L+ Y ++ +++++ + S+ S+N P G V
Sbjct: 476 SLAASDPDSGLNALISYSLLEPRNRDVSAS--------------SFISLN-PQTGAVHAT 520
Query: 93 RSLDFEKTQ 101
RS D+E+TQ
Sbjct: 521 RSFDYEQTQ 529
>gi|390459338|ref|XP_003732280.1| PREDICTED: protocadherin gamma-C4-like [Callithrix jacchus]
Length = 871
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 15/69 (21%)
Query: 33 NLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVN 92
+L A D D+G+N L+ Y ++ +++++ + S+ S+N P G V
Sbjct: 476 SLAASDPDSGLNALISYSLLEPRNRDVSAS--------------SFISLN-PQTGAVHAT 520
Query: 93 RSLDFEKTQ 101
RS D+E+TQ
Sbjct: 521 RSFDYEQTQ 529
>gi|380800259|gb|AFE72005.1| protocadherin gamma-C4 isoform 1 precursor, partial [Macaca
mulatta]
Length = 936
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 15/69 (21%)
Query: 33 NLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVN 92
+L A D D+G+N L+ Y ++ +++++ + S+ S+N P G V
Sbjct: 474 SLAASDPDSGLNALISYSLLEPRNRDVSAS--------------SFISLN-PQTGAVHAT 518
Query: 93 RSLDFEKTQ 101
RS D+E+TQ
Sbjct: 519 RSFDYEQTQ 527
>gi|344238053|gb|EGV94156.1| Protocadherin-19 [Cricetulus griseus]
Length = 611
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 15/74 (20%)
Query: 36 AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSL 95
A D D G+NG V Y IVPSQ +++ ++Y SIN P+ G + RS
Sbjct: 372 ARDPDLGLNGSVSYQIVPSQVRDMPV--------------FTYVSIN-PNSGDIYALRSF 416
Query: 96 DFEKTQRYLVTIVA 109
+ E+T+ + ++A
Sbjct: 417 NHEQTKAFEFKVLA 430
>gi|332234776|ref|XP_003266579.1| PREDICTED: protocadherin gamma-C4 [Nomascus leucogenys]
Length = 871
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 15/69 (21%)
Query: 33 NLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVN 92
+L A D D+G+N L+ Y ++ +++++ + S+ S+N P G V
Sbjct: 476 SLAASDPDSGLNALISYSLLEPRNRDVSAS--------------SFISLN-PQTGAVHAT 520
Query: 93 RSLDFEKTQ 101
RS D+E+TQ
Sbjct: 521 RSFDYEQTQ 529
>gi|327276771|ref|XP_003223141.1| PREDICTED: cadherin-12-like [Anolis carolinensis]
Length = 791
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 23/96 (23%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
++V + + +GS I + +RAVD D+G N +EY IVP DG +
Sbjct: 273 LKVPESSLIGSAIGR-IRAVDPDSGRNAEIEYTIVPG-------------------DGGN 312
Query: 78 YFSINLP---HQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I+ +G + + + LDFE + Y + AS
Sbjct: 313 LFDISTDENTQEGIIKLKKPLDFETKKAYTFKVEAS 348
>gi|127139226|ref|NP_001076023.1| protocadherin gamma-C4 [Pan troglodytes]
Length = 938
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 15/69 (21%)
Query: 33 NLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVN 92
+L A D D+G+N L+ Y ++ +++++ + S+ S+N P G V
Sbjct: 476 SLAASDPDSGLNALISYSLLEPRNRDVSAS--------------SFISLN-PQTGAVHAT 520
Query: 93 RSLDFEKTQ 101
RS D+E+TQ
Sbjct: 521 RSFDYEQTQ 529
>gi|133777266|gb|AAI01037.1| PCDHGC4 protein [Homo sapiens]
Length = 870
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 15/69 (21%)
Query: 33 NLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVN 92
+L A D D+G+N L+ Y ++ +++++ + S+ S+N P G V
Sbjct: 475 SLAASDPDSGLNALISYSLLEPRNRDVSAS--------------SFISLN-PQTGAVHAT 519
Query: 93 RSLDFEKTQ 101
RS D+E+TQ
Sbjct: 520 RSFDYEQTQ 528
>gi|403290283|ref|XP_003936252.1| PREDICTED: cadherin-6 [Saimiri boliviensis boliviensis]
Length = 790
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 17/92 (18%)
Query: 19 RVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSY 78
+ + +P G+ I + ++A DAD G N +EY I DG G D V+
Sbjct: 276 KTPESSPPGTPIGR-IKASDADVGENAEIEYSIT----------DGEGLDMFDVI----- 319
Query: 79 FSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ +G +TV + LDFEK + Y + + AS
Sbjct: 320 -TDQETQEGIITVKKLLDFEKKKVYTLKVEAS 350
>gi|380807263|gb|AFE75507.1| protocadherin-19 isoform c precursor, partial [Macaca mulatta]
Length = 130
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 15/77 (19%)
Query: 33 NLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVN 92
++ A D D G+NG V Y IVPSQ +++ ++Y SIN P+ G +
Sbjct: 8 SVSARDPDLGLNGSVSYQIVPSQVRDMPV--------------FTYVSIN-PNSGDIYAL 52
Query: 93 RSLDFEKTQRYLVTIVA 109
RS + E+T+ + ++A
Sbjct: 53 RSFNHEQTKAFEFKVLA 69
>gi|344265172|ref|XP_003404660.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 2-like [Loxodonta
africana]
Length = 4345
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 44/98 (44%), Gaps = 23/98 (23%)
Query: 12 RTIPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVT 71
+ +P + D T G +F+ + A D D GVNG+V Y
Sbjct: 2063 QHLPYYTIIQDGTEPGDVLFQ-VSATDQDLGVNGVVTY---------------------A 2100
Query: 72 VVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
+ Y+YF I+ P+ G +++ + D++ +Y + ++A
Sbjct: 2101 FAEDYTYFRID-PYLGDISLKKPFDYKALNKYCLKVIA 2137
>gi|119514193|gb|ABL75856.1| protocadherin 2A16 [Takifugu rubripes]
Length = 939
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 18/93 (19%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V + + PVG+T+ K + A+D D G NG +EY + + + I Y+
Sbjct: 255 VEIYENVPVGTTVTK-VSAIDPDEGANGEIEYSLSEAIHQKI----------------YN 297
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F ++ GQ+ + LD+E+++ Y + I AS
Sbjct: 298 LFELD-SLTGQIKLKGMLDYEESETYKLDIEAS 329
>gi|410900464|ref|XP_003963716.1| PREDICTED: LOW QUALITY PROTEIN: cadherin-23-like [Takifugu
rubripes]
Length = 3370
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 43/96 (44%), Gaps = 23/96 (23%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P V + + TPVG +IF + A D D G G V + P
Sbjct: 142 PYTVHIPENTPVGRSIFM-VNATDPDQGTGGSVLFSFQPPS------------------- 181
Query: 75 GYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
S+F+I+ +G VTV + LD+E T Y +T+ A+
Sbjct: 182 --SFFTID-GARGTVTVTKPLDYETTSAYQLTVNAT 214
Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 46/101 (45%), Gaps = 27/101 (26%)
Query: 10 RKRTIPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDR 69
+K TIP + +P G+ + RAVDAD G N +V YFI G +DG
Sbjct: 2739 QKMTIP------EHSPPGTMVGNVTRAVDADEGSNAVVYYFIAG------GNSDG----- 2781
Query: 70 VTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F ++L G++ + R LD E+ Y + I AS
Sbjct: 2782 --------NFGLSL--DGELKLYRDLDREEIPVYSIIIKAS 2812
>gi|326924382|ref|XP_003208407.1| PREDICTED: protocadherin-19-like [Meleagris gallopavo]
Length = 998
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 15/74 (20%)
Query: 36 AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSL 95
A D D G+NG V Y IVPSQ +++ ++Y SIN P+ G + RS
Sbjct: 493 ARDPDLGLNGSVSYQIVPSQVRDMPV--------------FTYVSIN-PNSGDIYALRSF 537
Query: 96 DFEKTQRYLVTIVA 109
+ E+T+ + ++A
Sbjct: 538 NHEQTKAFEFKVLA 551
>gi|431892542|gb|ELK02975.1| Protocadherin gamma-C4 [Pteropus alecto]
Length = 865
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 15/69 (21%)
Query: 33 NLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVN 92
+L A D D+G+N L+ Y ++ +++++ + S+ S+N P G V
Sbjct: 476 SLAASDPDSGLNALISYSLLEPRNRDVSAS--------------SFISLN-PQTGAVHAT 520
Query: 93 RSLDFEKTQ 101
RS D+E+TQ
Sbjct: 521 RSFDYEQTQ 529
>gi|344257356|gb|EGW13460.1| Protocadherin gamma-C4 [Cricetulus griseus]
Length = 605
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 15/69 (21%)
Query: 33 NLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVN 92
+L A D D+G+N L+ Y ++ +++++ + S+ S+N P G V
Sbjct: 218 SLAASDPDSGLNALISYSLLEPRNRDVSAS--------------SFISLN-PQTGAVHAT 262
Query: 93 RSLDFEKTQ 101
RS D+E+TQ
Sbjct: 263 RSFDYEQTQ 271
>gi|338713192|ref|XP_001504036.2| PREDICTED: LOW QUALITY PROTEIN: protocadherin gamma-C4 [Equus
caballus]
Length = 871
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 15/69 (21%)
Query: 33 NLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVN 92
+L A D D+G+N L+ Y ++ +++++ + S+ S+N P G V
Sbjct: 476 SLAASDPDSGLNALISYSLLEPRNRDVSAS--------------SFISLN-PQTGAVHAT 520
Query: 93 RSLDFEKTQ 101
RS D+E+TQ
Sbjct: 521 RSFDYEQTQ 529
>gi|149038755|gb|EDL93044.1| rCG22004, isoform CRA_b [Rattus norvegicus]
Length = 2970
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 23/84 (27%)
Query: 26 VGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPH 85
VG+ I + + A DAD+G L+EY ++VDG F+IN P+
Sbjct: 2033 VGTVILR-VTATDADSGNFALIEY---------------------SLVDGEGKFAIN-PN 2069
Query: 86 QGQVTVNRSLDFEKTQRYLVTIVA 109
G + V SLD EK Y++T +A
Sbjct: 2070 TGDIYVLSSLDREKKDHYILTALA 2093
Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 21/99 (21%)
Query: 12 RTIPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVT 71
+ +P + V + TP G ++++ + A+D D G+NGLV Y + VG R+
Sbjct: 507 QNLPFVAEVLEGTPAGVSVYQ-VVAIDLDEGLNGLVSYRM------------QVGMPRMD 553
Query: 72 VVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F IN G VT LD E+ Y + +VAS
Sbjct: 554 -------FVIN-STSGVVTTTAELDRERIAEYQLRVVAS 584
Score = 34.7 bits (78), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 18/94 (19%)
Query: 17 IVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGY 76
I+ + + P+ S +++ + A D D G+NG V Y + K+ G D +
Sbjct: 2235 ILHIKEEIPLRSNVYE-VYATDKDEGLNGAVRYSFL----KSTGNRD------------W 2277
Query: 77 SYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
YF+I+ P G + + LD EK Y + +VAS
Sbjct: 2278 EYFTID-PISGLIQTAQRLDREKQAVYSLILVAS 2310
>gi|350595824|ref|XP_003135278.3| PREDICTED: protocadherin-19, partial [Sus scrofa]
Length = 782
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 15/74 (20%)
Query: 36 AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSL 95
A D D G+NG V Y IVPSQ +++ ++Y SIN P+ G + RS
Sbjct: 307 ARDPDLGLNGSVSYQIVPSQVRDMPV--------------FTYVSIN-PNSGDIYALRSF 351
Query: 96 DFEKTQRYLVTIVA 109
+ E+T+ + ++A
Sbjct: 352 NHEQTKAFEFKVLA 365
>gi|332834334|ref|XP_003312663.1| PREDICTED: cadherin-23-like isoform 1 [Pan troglodytes]
Length = 1114
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 40/85 (47%), Gaps = 23/85 (27%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
PVG TI + A DAD+G L+EY ++ DG S F+IN P
Sbjct: 176 PVG-TIILTVTATDADSGNFALIEY---------------------SLGDGESKFAIN-P 212
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVA 109
G + V SLD EK Y++T +A
Sbjct: 213 TTGDIYVLSSLDREKKDHYILTALA 237
>gi|149038756|gb|EDL93045.1| rCG22004, isoform CRA_c [Rattus norvegicus]
Length = 2935
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 23/84 (27%)
Query: 26 VGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPH 85
VG+ I + + A DAD+G L+EY ++VDG F+IN P+
Sbjct: 2033 VGTVILR-VTATDADSGNFALIEY---------------------SLVDGEGKFAIN-PN 2069
Query: 86 QGQVTVNRSLDFEKTQRYLVTIVA 109
G + V SLD EK Y++T +A
Sbjct: 2070 TGDIYVLSSLDREKKDHYILTALA 2093
Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 21/99 (21%)
Query: 12 RTIPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVT 71
+ +P + V + TP G ++++ + A+D D G+NGLV Y + VG R+
Sbjct: 507 QNLPFVAEVLEGTPAGVSVYQ-VVAIDLDEGLNGLVSYRM------------QVGMPRMD 553
Query: 72 VVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F IN G VT LD E+ Y + +VAS
Sbjct: 554 -------FVIN-STSGVVTTTAELDRERIAEYQLRVVAS 584
Score = 34.7 bits (78), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 18/94 (19%)
Query: 17 IVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGY 76
I+ + + P+ S +++ + A D D G+NG V Y + K+ G D +
Sbjct: 2235 ILHIKEEIPLRSNVYE-VYATDKDEGLNGAVRYSFL----KSTGNRD------------W 2277
Query: 77 SYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
YF+I+ P G + + LD EK Y + +VAS
Sbjct: 2278 EYFTID-PISGLIQTAQRLDREKQAVYSLILVAS 2310
>gi|149038757|gb|EDL93046.1| rCG22004, isoform CRA_d [Rattus norvegicus]
Length = 2934
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 23/84 (27%)
Query: 26 VGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPH 85
VG+ I + + A DAD+G L+EY ++VDG F+IN P+
Sbjct: 2032 VGTVILR-VTATDADSGNFALIEY---------------------SLVDGEGKFAIN-PN 2068
Query: 86 QGQVTVNRSLDFEKTQRYLVTIVA 109
G + V SLD EK Y++T +A
Sbjct: 2069 TGDIYVLSSLDREKKDHYILTALA 2092
Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 21/99 (21%)
Query: 12 RTIPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVT 71
+ +P + V + TP G ++++ + A+D D G+NGLV Y + VG R+
Sbjct: 507 QNLPFVAEVLEGTPAGVSVYQ-VVAIDLDEGLNGLVSYRM------------QVGMPRMD 553
Query: 72 VVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F IN G VT LD E+ Y + +VAS
Sbjct: 554 -------FVIN-STSGVVTTTAELDRERIAEYQLRVVAS 584
Score = 34.7 bits (78), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 18/94 (19%)
Query: 17 IVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGY 76
I+ + + P+ S +++ + A D D G+NG V Y + K+ G D +
Sbjct: 2234 ILHIKEEIPLRSNVYE-VYATDKDEGLNGAVRYSFL----KSTGNRD------------W 2276
Query: 77 SYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
YF+I+ P G + + LD EK Y + +VAS
Sbjct: 2277 EYFTID-PISGLIQTAQRLDREKQAVYSLILVAS 2309
>gi|431918261|gb|ELK17488.1| Protocadherin-23 [Pteropus alecto]
Length = 3338
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 52/112 (46%), Gaps = 37/112 (33%)
Query: 2 TC--TVKVSNRKRTIPVIVR------VSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVP 53
TC ++ V + P+ R +++ PVG F ++A DADAG+NGL+EY
Sbjct: 635 TCLVSITVDDMNDNEPIFQRQVYNATLAEHAPVGH-CFLQVKASDADAGLNGLIEY---- 689
Query: 54 SQDKNIGTADGVGKDRVTVVDGY-SY-----FSINLPHQGQVTVNRSLDFEK 99
++ DG+ SY F I+ P GQ+ V++ +D EK
Sbjct: 690 -----------------SLYDGFQSYGAPQAFQID-PRDGQICVSQDIDREK 723
Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 24/113 (21%)
Query: 1 LTCTVKVSNRKRTIPVIVRVSDLTPVGST---IFKNLRAVDADAGVNGLVEYFIVPSQDK 57
+ CTV+ N +IV + D+ + + + + A D DAG NG VEY I+ D
Sbjct: 1806 ILCTVEDEN-DHAPEIIVPIHDIEVLENQEPGVVYTVLASDMDAGTNGAVEYHII---DG 1861
Query: 58 NIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
N G YF+IN G+++ +LD E+ + + I+ S
Sbjct: 1862 NTG----------------EYFAIN-ETSGELSTTHALDREQVNSFALVILCS 1897
>gi|47227017|emb|CAG05909.1| unnamed protein product [Tetraodon nigroviridis]
Length = 881
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 18/95 (18%)
Query: 16 VIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
+ V + + +PVG + + + A D D GVNG V Y + +G R+ VD
Sbjct: 244 LTVELDEDSPVGHRVLR-VHAFDPDEGVNGEVTYALAAGFSPEVG--------RLFHVD- 293
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
P+ G+VT+ +DFE+ + Y + I AS
Sbjct: 294 --------PYTGEVTLKGLVDFERRRLYELVIKAS 320
>gi|395504758|ref|XP_003756714.1| PREDICTED: protocadherin beta-16-like [Sarcophilus harrisii]
Length = 792
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 19/91 (20%)
Query: 20 VSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYF 79
V++ +P+GS + + AVD+D G NG V Y S +N G G+ F
Sbjct: 251 VAENSPIGSEV-TTVSAVDSDQGRNGEVTY----SFSQNAGK-------------GHRAF 292
Query: 80 SINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
I+ G++ V++ LDFE T++Y +++ A+
Sbjct: 293 QID-SLTGEIRVSKPLDFEMTEKYELSVRAT 322
>gi|327281345|ref|XP_003225409.1| PREDICTED: neural-cadherin-like [Anolis carolinensis]
Length = 2607
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 52/115 (45%), Gaps = 28/115 (24%)
Query: 3 CTVKVSNRKRTIPV----IVRVSDL---TPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQ 55
C ++V + PV +V++S PVG+TI + A D D+ +NG +EY I
Sbjct: 1320 CLIEVEDCNDHTPVFNSQLVQLSPFYENIPVGTTII-TVTATDEDSNLNGAIEYSIQLDS 1378
Query: 56 DKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
D F+++ G VTV++SLD E TQ Y + + AS
Sbjct: 1379 DPT------------------GQFAVD--QDGHVTVSKSLDREATQAYGLIVQAS 1413
>gi|426365080|ref|XP_004049616.1| PREDICTED: cadherin-23-like [Gorilla gorilla gorilla]
Length = 1049
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 40/85 (47%), Gaps = 23/85 (27%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
PVG TI + A DAD+G L+EY ++ DG S F+IN P
Sbjct: 176 PVG-TIILTVTATDADSGNFALIEY---------------------SLGDGESKFAIN-P 212
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVA 109
G + V SLD EK Y++T +A
Sbjct: 213 TTGDIYVLSSLDREKKDHYILTALA 237
>gi|383849585|ref|XP_003700425.1| PREDICTED: protocadherin-like wing polarity protein stan-like
[Megachile rotundata]
Length = 3164
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 12/86 (13%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
PVGST+ ++A D DAG N +EY I+ + + G T++ F I+ P
Sbjct: 380 PVGSTVV-TVKATDQDAGRNAELEYSIL-----STTSGSGTANSEDTLI-----FRID-P 427
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVAS 110
G VT LD EKT+ Y V + S
Sbjct: 428 RSGVVTTRTPLDREKTEVYTVILSVS 453
>gi|332834336|ref|XP_003312664.1| PREDICTED: cadherin-23-like isoform 2 [Pan troglodytes]
Length = 1079
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 40/85 (47%), Gaps = 23/85 (27%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
PVG TI + A DAD+G L+EY ++ DG S F+IN P
Sbjct: 176 PVG-TIILTVTATDADSGNFALIEY---------------------SLGDGESKFAIN-P 212
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVA 109
G + V SLD EK Y++T +A
Sbjct: 213 TTGDIYVLSSLDREKKDHYILTALA 237
>gi|224068302|ref|XP_002191697.1| PREDICTED: protocadherin beta-4-like [Taeniopygia guttata]
Length = 813
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 49/94 (52%), Gaps = 19/94 (20%)
Query: 17 IVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGY 76
I +V + TP GS + ++A D DAGVNG++ Y + ++ +G +D
Sbjct: 242 IGKVLENTPEGSVVL-TVQATDQDAGVNGVISYQL----NQAVGQSD------------- 283
Query: 77 SYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
S F I+ P G++ + + LDFE + + + + A+
Sbjct: 284 SAFLID-PITGEIKITKPLDFEAAETHEMIVRAT 316
>gi|284925136|ref|NP_001165405.1| cadherin-23 isoform 7 [Homo sapiens]
gi|50254114|gb|AAT72166.1| cadherin 23 isoform B2 [Homo sapiens]
Length = 1079
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 40/85 (47%), Gaps = 23/85 (27%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
PVG TI + A DAD+G L+EY ++ DG S F+IN P
Sbjct: 176 PVG-TIILTVTATDADSGNFALIEY---------------------SLGDGESKFAIN-P 212
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVA 109
G + V SLD EK Y++T +A
Sbjct: 213 TTGDIYVLSSLDREKKDHYILTALA 237
>gi|327270367|ref|XP_003219961.1| PREDICTED: protocadherin gamma-B5-like [Anolis carolinensis]
Length = 818
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 19/92 (20%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V + + P+GS + + + A+D D GVN +EY +I T
Sbjct: 249 VSIVESVPIGSLLLQ-VSALDKDDGVNAQIEYHF-----SSISTT------------AQQ 290
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
F ++ PH G++ + +LDFE+T Y +++ A
Sbjct: 291 KFRLD-PHSGKIAIKENLDFEETDAYTMSVEA 321
>gi|195976043|gb|ACG63553.1| cadherin 23 isoform E [Mus musculus]
Length = 347
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 44/96 (45%), Gaps = 23/96 (23%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P VR+ + TPVG+ IF + A D D G G V Y P
Sbjct: 24 PYSVRIPENTPVGTPIFI-VNATDPDLGAGGSVLYSFQPPS------------------- 63
Query: 75 GYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+F+I+ +G VTV + LD+E TQ Y +T+ A+
Sbjct: 64 --PFFAID-SARGIVTVIQELDYEVTQAYQLTVNAT 96
>gi|405957379|gb|EKC23594.1| Protocadherin-9 [Crassostrea gigas]
Length = 1201
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 19/89 (21%)
Query: 22 DLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSI 81
DL P GST+ K L A DAD G NG V Y + P Q ++I +D + S
Sbjct: 314 DLAP-GSTVMK-LSATDADIGANGRVIYKLSPYQSQDI-------------IDMFQIDSA 358
Query: 82 NLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
N G +T+ +SL +E + Y + + A+
Sbjct: 359 N----GYLTLAKSLKYEPDEVYRIIVDAT 383
>gi|327270385|ref|XP_003219970.1| PREDICTED: protocadherin gamma-B1-like [Anolis carolinensis]
Length = 822
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 23/94 (24%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFI--VPSQDKNIGTADGVGKDRVTVVDG 75
V + + TP S + + ++A D DAG NG V Y +P + + + D KD
Sbjct: 253 VNLKENTPRRSLVVQ-VKATDKDAGSNGQVTYNFRNIPERARQKFSLDS--KD------- 302
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
G++T+ +LDFE+++RYLV + A
Sbjct: 303 -----------GKITIKEALDFEESERYLVAVEA 325
>gi|119574817|gb|EAW54432.1| cadherin-like 23, isoform CRA_f [Homo sapiens]
Length = 1079
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 40/85 (47%), Gaps = 23/85 (27%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
PVG TI + A DAD+G L+EY ++ DG S F+IN P
Sbjct: 176 PVG-TIILTVTATDADSGNFALIEY---------------------SLGDGESKFAIN-P 212
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVA 109
G + V SLD EK Y++T +A
Sbjct: 213 TTGDIYVLSSLDREKKDHYILTALA 237
>gi|431902348|gb|ELK08849.1| Protocadherin Fat 1 [Pteropus alecto]
Length = 4588
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 42/86 (48%), Gaps = 18/86 (20%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
P GS + + +RA D D+G NG V Y + SQ V V++ FSIN+
Sbjct: 2823 PGGSRVIQ-IRASDLDSGTNGQVMYSLDQSQ-------------SVEVIES---FSINM- 2864
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVAS 110
G +T + LD E+ Y + +VAS
Sbjct: 2865 ETGWITTLKELDHERRDNYQIKVVAS 2890
>gi|158297299|ref|XP_317558.4| AGAP007924-PA [Anopheles gambiae str. PEST]
gi|157015128|gb|EAA12848.4| AGAP007924-PA [Anopheles gambiae str. PEST]
Length = 5159
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 21/95 (22%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P V++S+ +G+ + + + DAD G+NG V Y+I ++G +R + D
Sbjct: 1219 PYRVQISEGASIGTQLVR-VYTHDADEGLNGDVFYYI----------SEGNRAERFAIDD 1267
Query: 75 GYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
GQ+T+ R+LD E T Y +T+VA
Sbjct: 1268 S----------TGQITLARALDRETTASYRLTVVA 1292
>gi|14625439|dbj|BAB61902.1| KIAA1774 protein [Homo sapiens]
Length = 1147
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 40/85 (47%), Gaps = 23/85 (27%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
PVG TI + A DAD+G L+EY ++ DG S F+IN P
Sbjct: 244 PVG-TIILTVTATDADSGNFALIEY---------------------SLGDGESKFAIN-P 280
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVA 109
G + V SLD EK Y++T +A
Sbjct: 281 TTGDIYVLSSLDREKKDHYILTALA 305
>gi|332029981|gb|EGI69806.1| Protocadherin-like wing polarity protein stan [Acromyrmex
echinatior]
Length = 3164
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 20/88 (22%)
Query: 22 DLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSI 81
DL + + +RA+DADAG N V Y I+ +N + D +
Sbjct: 495 DLDYTTNPVIARIRAMDADAGANAAVRYAIIGGNTQNTFSIDSM---------------- 538
Query: 82 NLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
G VT+ + LD+E T+ Y + I A
Sbjct: 539 ----NGDVTLVKPLDYESTRSYKIVIRA 562
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 12/83 (14%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
PVGST+ ++A D D G N VEY IV + +T ++ + F I+ P
Sbjct: 380 PVGSTVI-TVKATDQDTGRNAEVEYSIVSI----------MAGSSITHMEDTATFRID-P 427
Query: 85 HQGQVTVNRSLDFEKTQRYLVTI 107
G VT LD E+T+ Y V +
Sbjct: 428 RSGVVTTRTPLDREQTEIYTVVL 450
Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 17/92 (18%)
Query: 20 VSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYF 79
VS+ PVG +I + ++A DAD G N L++Y IG D G F
Sbjct: 599 VSESVPVGYSILR-VQAYDADEGNNALIKY--------TIGARDFTGASTEN-------F 642
Query: 80 SINLPHQ-GQVTVNRSLDFEKTQRYLVTIVAS 110
I + + G + + LD E+ +Y T++A+
Sbjct: 643 PITVKAETGWIYTTKQLDREQCSKYQFTVIAA 674
>gi|119514200|gb|ABL75863.1| protocadherin 2A23 [Takifugu rubripes]
Length = 938
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 42/93 (45%), Gaps = 18/93 (19%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V + + P+GS + + + A D D G NG V Y S NI +
Sbjct: 250 VTLPENAPLGSAVVQ-VNATDLDEGQNGEVSYSFGNSVSNNI----------------FQ 292
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F IN P G++TV +D+E+ +Y + I AS
Sbjct: 293 LFGIN-PSTGEITVKGLIDYEQKDKYEIEIEAS 324
>gi|33112062|gb|AAP94032.1| cadherin 7 precursor [Mus musculus]
gi|148707892|gb|EDL39839.1| cadherin 7, type 2 [Mus musculus]
gi|187954405|gb|AAI41120.1| Cadherin 7, type 2 [Mus musculus]
Length = 785
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 17/91 (18%)
Query: 20 VSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYF 79
V + PV S + + ++A DAD GVN +EY IV DGVG +++
Sbjct: 271 VPESLPVASVVAR-IKAADADIGVNAEMEYKIV--------DGDGVGIFKISADKDT--- 318
Query: 80 SINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+G +T+ + LDFE Y + I A+
Sbjct: 319 -----QEGIITIQKELDFEAKTSYTLRIEAA 344
>gi|348544835|ref|XP_003459886.1| PREDICTED: cadherin-7-like [Oreochromis niloticus]
Length = 1193
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 20/85 (23%)
Query: 28 STIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPH-- 85
S + ++A+DADAG N ++Y I+ DG+G R+ + PH
Sbjct: 692 SAVVAKIKALDADAGPNAEMDYRIL--------DGDGLGTFRM----------LTDPHTQ 733
Query: 86 QGQVTVNRSLDFEKTQRYLVTIVAS 110
+G V + ++LDFE RY + + AS
Sbjct: 734 EGLVILIKTLDFETKTRYTLRVEAS 758
>gi|395814685|ref|XP_003780875.1| PREDICTED: protocadherin Fat 3 isoform 2 [Otolemur garnettii]
Length = 4589
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 47/98 (47%), Gaps = 25/98 (25%)
Query: 12 RTIPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVT 71
++ P V V + PVG+ I K ++A DAD+G NG V + T
Sbjct: 727 KSFPSDVAVKEDLPVGANILK-IKAYDADSGFNGKVLF---------------------T 764
Query: 72 VVDGY--SYFSINLPHQGQVTVNRSLDFEKTQRYLVTI 107
+ DG S F+I++ GQ+ V +D E+T YL+ I
Sbjct: 765 ISDGNTDSCFNIDM-ETGQLKVLMPMDREQTDLYLLNI 801
>gi|380024251|ref|XP_003695917.1| PREDICTED: cadherin-89D-like [Apis florea]
Length = 1936
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 21/98 (21%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAG--VNGLVEYFIVPSQDKNIGTADGVGKDRVTV 72
P V V +LTPVG TIF+ + AVD D N V Y IV ++ GK
Sbjct: 152 PYHVTVDELTPVGVTIFRGIHAVDGDKPNTPNSDVHYAIVKGNER--------GK----- 198
Query: 73 VDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
FS+ H+ + + + +D++ R ++A+
Sbjct: 199 ------FSLESGHRTALILRKPVDYDNGDREFTLVIAA 230
>gi|403270556|ref|XP_003927241.1| PREDICTED: protocadherin-17 [Saimiri boliviensis boliviensis]
Length = 1159
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 15/74 (20%)
Query: 36 AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSL 95
A D D G NG V Y I+PS +IG V Y+Y S+N P G + RS
Sbjct: 496 AQDPDLGQNGTVSYSILPS---HIGD-----------VSIYTYVSVN-PTNGAIYALRSF 540
Query: 96 DFEKTQRYLVTIVA 109
+FE+T+ + ++A
Sbjct: 541 NFEQTKSFEFKVLA 554
>gi|296189177|ref|XP_002742673.1| PREDICTED: protocadherin-17 [Callithrix jacchus]
Length = 1159
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 15/74 (20%)
Query: 36 AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSL 95
A D D G NG V Y I+PS +IG V Y+Y S+N P G + RS
Sbjct: 496 AQDPDLGQNGTVSYSILPS---HIGD-----------VSIYTYVSVN-PTNGAIYALRSF 540
Query: 96 DFEKTQRYLVTIVA 109
+FE+T+ + ++A
Sbjct: 541 NFEQTKSFEFKVLA 554
>gi|431918060|gb|ELK17288.1| Protocadherin Fat 2 [Pteropus alecto]
Length = 4424
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 43/98 (43%), Gaps = 23/98 (23%)
Query: 12 RTIPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVT 71
+ +P + D T G +F+ + A D D GVNG V Y
Sbjct: 2145 KHLPYYTIIQDGTEPGDVLFQ-VSATDQDLGVNGAVTY---------------------A 2182
Query: 72 VVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
+ Y+YF I+ P+ G +++ + D++ +Y + ++A
Sbjct: 2183 FAEDYTYFRID-PYLGDISLKKPFDYQALNKYHLKVIA 2219
>gi|402871255|ref|XP_003899588.1| PREDICTED: cadherin-6-like, partial [Papio anubis]
Length = 519
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 17/92 (18%)
Query: 19 RVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSY 78
+ + +P G+ I + ++A DAD G N +EY I DG G D V+
Sbjct: 5 KTPESSPPGTPIGR-IKASDADVGENAEIEYSIT----------DGEGLDMFDVI----- 48
Query: 79 FSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ +G +T+ + LDFEK + Y + + AS
Sbjct: 49 -TDQETQEGIITIKKLLDFEKKKVYTLKVEAS 79
>gi|395814683|ref|XP_003780874.1| PREDICTED: protocadherin Fat 3 isoform 1 [Otolemur garnettii]
Length = 4557
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 47/98 (47%), Gaps = 25/98 (25%)
Query: 12 RTIPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVT 71
++ P V V + PVG+ I K ++A DAD+G NG V + T
Sbjct: 727 KSFPSDVAVKEDLPVGANILK-IKAYDADSGFNGKVLF---------------------T 764
Query: 72 VVDGY--SYFSINLPHQGQVTVNRSLDFEKTQRYLVTI 107
+ DG S F+I++ GQ+ V +D E+T YL+ I
Sbjct: 765 ISDGNTDSCFNIDM-ETGQLKVLMPMDREQTDLYLLNI 801
>gi|350414007|ref|XP_003490178.1| PREDICTED: protocadherin-like wing polarity protein stan-like
[Bombus impatiens]
Length = 3163
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 40/86 (46%), Gaps = 12/86 (13%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
PVGST+ ++A D D G N VEY I + T G G V D F I+ P
Sbjct: 380 PVGSTVV-TVKATDQDTGRNAEVEYSI-------LSTTSGSG---VANADDALTFRID-P 427
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVAS 110
G VT LD EKT+ Y V + S
Sbjct: 428 RTGVVTTRTPLDREKTEVYTVILSVS 453
>gi|444525563|gb|ELV14089.1| Protocadherin gamma-C4 [Tupaia chinensis]
Length = 865
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 15/69 (21%)
Query: 33 NLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVN 92
+L A D D+G+N L+ Y ++ +++++ + S+ S+N P G V
Sbjct: 476 SLAASDPDSGLNSLISYSLLEPRNRDVSAS--------------SFISLN-PQTGAVHAT 520
Query: 93 RSLDFEKTQ 101
RS D+E+TQ
Sbjct: 521 RSFDYEQTQ 529
>gi|386118337|gb|AFI99116.1| seven transmembrane protocadherin flamingo [Clytia hemisphaerica]
Length = 2923
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 23/97 (23%)
Query: 16 VIVRVSDLTP---VGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTV 72
+ R SD+ VGS ++K L A D D+G NG + + + DG+ +D
Sbjct: 549 IFERTSDIMEDIKVGSFVYK-LSARDRDSGPNGDITFKL----------EDGLPQDFPFE 597
Query: 73 VDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
+D P G++TV++ LD+E T+ Y ++A
Sbjct: 598 LD---------PKSGEITVSKGLDYETTKSYKFGVIA 625
>gi|344287782|ref|XP_003415631.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 3-like [Loxodonta
africana]
Length = 4556
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 47/98 (47%), Gaps = 25/98 (25%)
Query: 12 RTIPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVT 71
++ P V V + PVG+ I K ++A DAD+G NG V + T
Sbjct: 726 KSFPSDVAVKEDLPVGANILK-IKAYDADSGFNGKVLF---------------------T 763
Query: 72 VVDGY--SYFSINLPHQGQVTVNRSLDFEKTQRYLVTI 107
+ DG S F+I++ GQ+ V +D E+T YL+ I
Sbjct: 764 ISDGNTDSCFNIDM-ETGQLKVLMPMDREQTDLYLLNI 800
>gi|74228177|dbj|BAE23971.1| unnamed protein product [Mus musculus]
Length = 671
Score = 37.0 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 15/69 (21%)
Query: 33 NLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVN 92
+L A D D+G+N L+ Y ++ +++++ + S+ S+N P G V
Sbjct: 209 SLAASDPDSGLNALISYSLLEPRNRDVSAS--------------SFISLN-PQTGAVHAT 253
Query: 93 RSLDFEKTQ 101
RS D+E+TQ
Sbjct: 254 RSFDYEQTQ 262
>gi|348545824|ref|XP_003460379.1| PREDICTED: cadherin-7-like [Oreochromis niloticus]
Length = 701
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 20/85 (23%)
Query: 28 STIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPH-- 85
S + ++A+DADAG N ++Y I+ DG+G R+ + PH
Sbjct: 354 SAVVAKIKALDADAGPNAEMDYRIL--------DGDGLGTFRM----------LTDPHTQ 395
Query: 86 QGQVTVNRSLDFEKTQRYLVTIVAS 110
+G V + ++LDFE RY + + AS
Sbjct: 396 EGLVILIKTLDFETKTRYTLRVEAS 420
>gi|348507435|ref|XP_003441261.1| PREDICTED: cadherin-23-like [Oreochromis niloticus]
Length = 3464
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 23/96 (23%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P V + + TPVG +IF + A D D G G V + P
Sbjct: 238 PYTVNIPEDTPVGRSIFM-VNASDPDQGTGGSVLFSFQPPS------------------- 277
Query: 75 GYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
++F+I+ +G VTV R+LD+E T Y +T+ A+
Sbjct: 278 --AFFAID-GARGTVTVTRALDYETTTAYQLTVNAT 310
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 23/92 (25%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
+ + + TP G+++ + L A D DAG G+V Y+ D+
Sbjct: 567 ISLPENTPPGTSLLRIL-ATDGDAGTFGIVRYYFTDEPDQ-------------------- 605
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
FSI+ G V + SLD+E +R+ +T++A
Sbjct: 606 -FSID-EETGWVVLQASLDYELMRRFTLTVLA 635
Score = 34.7 bits (78), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 45/101 (44%), Gaps = 29/101 (28%)
Query: 15 PVIVRVSDLTPV------GSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKD 68
PV V+ S PV G+TI + +RA DAD+G+ ++EY
Sbjct: 2499 PVFVQPSYQEPVFENVDLGTTIVR-VRATDADSGLFAVIEY------------------- 2538
Query: 69 RVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
++VDG F I P G++ + LD E Y +T VA
Sbjct: 2539 --SLVDGEGKFGIR-PSTGEIYILSPLDRETKDHYTLTAVA 2576
>gi|149017351|gb|EDL76402.1| rCG49295, isoform CRA_al [Rattus norvegicus]
Length = 761
Score = 37.0 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 15/69 (21%)
Query: 33 NLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVN 92
+L A D D+G+N L+ Y ++ +++++ + S+ S+N P G V
Sbjct: 361 SLAASDPDSGLNALISYSLLEPRNRDVSAS--------------SFISLN-PQTGAVHAT 405
Query: 93 RSLDFEKTQ 101
RS D+E+TQ
Sbjct: 406 RSFDYEQTQ 414
>gi|149017350|gb|EDL76401.1| rCG49295, isoform CRA_ak [Rattus norvegicus]
Length = 823
Score = 37.0 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 15/69 (21%)
Query: 33 NLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVN 92
+L A D D+G+N L+ Y ++ +++++ + S+ S+N P G V
Sbjct: 361 SLAASDPDSGLNALISYSLLEPRNRDVSAS--------------SFISLN-PQTGAVHAT 405
Query: 93 RSLDFEKTQ 101
RS D+E+TQ
Sbjct: 406 RSFDYEQTQ 414
>gi|293343041|ref|XP_001065084.2| PREDICTED: protocadherin beta-14 [Rattus norvegicus]
gi|293354900|ref|XP_001055753.2| PREDICTED: protocadherin beta-14 [Rattus norvegicus]
gi|149017301|gb|EDL76352.1| rCG49606 [Rattus norvegicus]
Length = 798
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 19/93 (20%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V+V + +PVGS + + A D DAG +G + Y + S ++ +
Sbjct: 250 VQVQENSPVGSLVI-TVSARDLDAGTHGELSYSLFQSSNQVLRA---------------- 292
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F IN G++ V + LDFE+TQ Y + I AS
Sbjct: 293 -FEINT-DTGEIRVRKLLDFEETQSYRMEIEAS 323
>gi|432880945|ref|XP_004073728.1| PREDICTED: protocadherin Fat 2-like [Oryzias latipes]
Length = 4001
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 49/97 (50%), Gaps = 23/97 (23%)
Query: 14 IPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVV 73
+P + +S+ + G +++ A+D+D G NG + Y ++V
Sbjct: 2197 LPFSMMISEDSEPGDVLYQ-ATAIDSDQGENGSIIY---------------------SLV 2234
Query: 74 DGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ + +F I+ P G +++ + LDFE +Y++T++A+
Sbjct: 2235 EDFDFFWID-PDVGDISLKKPLDFEALNKYVLTVLAT 2270
>gi|395520507|ref|XP_003764370.1| PREDICTED: protocadherin Fat 3 isoform 1 [Sarcophilus harrisii]
Length = 4557
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 47/98 (47%), Gaps = 25/98 (25%)
Query: 12 RTIPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVT 71
++ P + V + PVG+ I K ++A DAD+G NG V + T
Sbjct: 727 KSFPSDIAVKEDMPVGANILK-IKAFDADSGFNGKVVF---------------------T 764
Query: 72 VVDGY--SYFSINLPHQGQVTVNRSLDFEKTQRYLVTI 107
+ DG S F+I++ GQ+ V +D E+T YL+ I
Sbjct: 765 ISDGNTDSCFNIDM-ETGQLKVLMPMDREQTDLYLLNI 801
>gi|344239133|gb|EGV95236.1| Cadherin-7 [Cricetulus griseus]
Length = 719
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 23/94 (24%)
Query: 20 VSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYF 79
V + PV S + + ++A DAD GVN +EY IV DG DG F
Sbjct: 205 VPESLPVASVVAR-IKAADADIGVNAEMEYKIV----------DG---------DGLGIF 244
Query: 80 SINLP---HQGQVTVNRSLDFEKTQRYLVTIVAS 110
I+ +G +T+ + LDFE Y + I A+
Sbjct: 245 KISADKDTQEGIITIQKELDFEAKTSYTLRIEAA 278
>gi|242008966|ref|XP_002425264.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212509029|gb|EEB12526.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 1882
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 46/100 (46%), Gaps = 22/100 (22%)
Query: 14 IPVIVRVSDLTPVGSTIFKNLRAVDADAG--VNGLVEYFIVPSQDKNIGTADGVGKDRVT 71
+P V V +LTPVG TIF+ +RA+D D N V Y IV G +G
Sbjct: 110 VPYHVTVDELTPVGLTIFRGIRAIDRDKPNTPNSDVHYAIVG------GNKEG------- 156
Query: 72 VVDGYSYFSINLPHQGQVTVNRSLDFEK-TQRYLVTIVAS 110
FS+ H+ + + + LD++ Y + I+AS
Sbjct: 157 ------KFSLESSHRPDLILRKPLDYDSGGTEYALKIMAS 190
>gi|441620238|ref|XP_004088652.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 1 [Nomascus
leucogenys]
Length = 4585
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 42/86 (48%), Gaps = 18/86 (20%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
P GS + + +RA DAD+G N V Y + SQ V V++ F+IN+
Sbjct: 2820 PGGSRVIQ-IRASDADSGTNSQVMYSLDQSQ-------------SVEVIES---FAINM- 2861
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVAS 110
G +T + LD EK Y + +VAS
Sbjct: 2862 ETGWITTLKELDHEKRDNYQIKVVAS 2887
>gi|410925628|ref|XP_003976282.1| PREDICTED: protocadherin alpha-8-like [Takifugu rubripes]
Length = 808
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 42/93 (45%), Gaps = 18/93 (19%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V + + P+GS + + + A D D G NG V Y S NI +
Sbjct: 250 VTLPENAPLGSAVVQ-VNATDLDEGQNGEVSYSFGNSVSNNI----------------FQ 292
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F IN P G++TV +D+E+ +Y + I AS
Sbjct: 293 LFGIN-PSTGEITVKGLIDYEQKDKYEIEIEAS 324
>gi|260828414|ref|XP_002609158.1| hypothetical protein BRAFLDRAFT_131370 [Branchiostoma floridae]
gi|229294513|gb|EEN65168.1| hypothetical protein BRAFLDRAFT_131370 [Branchiostoma floridae]
Length = 2847
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 21/91 (23%)
Query: 20 VSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYF 79
VS+ TP+GS I N+ AV D G N + Y I+ + GK F
Sbjct: 1976 VSESTPIGSQII-NVYAVSKDVGPNAEITYEIISGNEH--------GK-----------F 2015
Query: 80 SINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
I + G++T+ +LD+E +Q Y +T+ AS
Sbjct: 2016 EIG-SYSGKITIVNTLDYEASQGYYLTVKAS 2045
>gi|395520509|ref|XP_003764371.1| PREDICTED: protocadherin Fat 3 isoform 2 [Sarcophilus harrisii]
Length = 4589
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 47/98 (47%), Gaps = 25/98 (25%)
Query: 12 RTIPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVT 71
++ P + V + PVG+ I K ++A DAD+G NG V + T
Sbjct: 727 KSFPSDIAVKEDMPVGANILK-IKAFDADSGFNGKVVF---------------------T 764
Query: 72 VVDGY--SYFSINLPHQGQVTVNRSLDFEKTQRYLVTI 107
+ DG S F+I++ GQ+ V +D E+T YL+ I
Sbjct: 765 ISDGNTDSCFNIDM-ETGQLKVLMPMDREQTDLYLLNI 801
>gi|395511789|ref|XP_003760134.1| PREDICTED: cadherin-7 [Sarcophilus harrisii]
Length = 785
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 17/91 (18%)
Query: 20 VSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYF 79
V + PV S + + ++A DAD G N +EY IV DG+G +++V
Sbjct: 271 VPESLPVASVVAR-IKAADADVGPNAEMEYKIV--------DGDGLGVFKISVDKDT--- 318
Query: 80 SINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+G +T+ + LDFE Y + I AS
Sbjct: 319 -----QEGIITIQKELDFEAKTSYTLRIEAS 344
>gi|380798659|gb|AFE71205.1| protocadherin-17 precursor, partial [Macaca mulatta]
Length = 750
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 15/74 (20%)
Query: 36 AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSL 95
A D D G NG V Y I+PS +IG V Y+Y S+N P G + RS
Sbjct: 87 AQDPDLGQNGTVSYSILPS---HIGD-----------VSIYTYVSVN-PTNGAIYALRSF 131
Query: 96 DFEKTQRYLVTIVA 109
+FE+T+ + ++A
Sbjct: 132 NFEQTKAFEFKVLA 145
>gi|195976045|gb|ACG63554.1| cadherin 23 isoform F [Mus musculus]
Length = 283
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 44/96 (45%), Gaps = 23/96 (23%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P VR+ + TPVG+ IF + A D D G G V Y P
Sbjct: 24 PYSVRIPENTPVGTPIFI-VNATDPDLGAGGSVLYSFQPPS------------------- 63
Query: 75 GYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+F+I+ +G VTV + LD+E TQ Y +T+ A+
Sbjct: 64 --PFFAID-SARGIVTVIQELDYEVTQAYQLTVNAT 96
>gi|355754720|gb|EHH58621.1| Protocadherin-68 [Macaca fascicularis]
Length = 1159
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 15/74 (20%)
Query: 36 AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSL 95
A D D G NG V Y I+PS +IG V Y+Y S+N P G + RS
Sbjct: 496 AQDPDLGQNGTVSYSILPS---HIGD-----------VSIYTYVSVN-PTNGAIYALRSF 540
Query: 96 DFEKTQRYLVTIVA 109
+FE+T+ + ++A
Sbjct: 541 NFEQTKAFEFKVLA 554
>gi|109079047|ref|XP_001091889.1| PREDICTED: protocadherin beta-14 isoform 2 [Macaca mulatta]
Length = 798
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 15/68 (22%)
Query: 36 AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSL 95
A D D+G N LV Y ++PSQD ++ A S SIN G + RSL
Sbjct: 475 ATDRDSGTNALVTYSLLPSQDPHLPLA--------------SLVSINT-DNGHLFALRSL 519
Query: 96 DFEKTQRY 103
D+E Q +
Sbjct: 520 DYEALQEF 527
>gi|156399383|ref|XP_001638481.1| predicted protein [Nematostella vectensis]
gi|156225602|gb|EDO46418.1| predicted protein [Nematostella vectensis]
Length = 1888
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 40/85 (47%), Gaps = 25/85 (29%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
PVG+T+ ++ A D D+GVNG YF V SQ +FS++ P
Sbjct: 851 PVGTTVL-SVTARDLDSGVNGQFHYF-VESQ----------------------FFSVD-P 885
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVA 109
+ G +T R LDFE + +VA
Sbjct: 886 YTGWITTKRPLDFETNPTHSFLVVA 910
>gi|388452353|ref|NP_001252640.1| protocadherin-17 precursor [Macaca mulatta]
gi|355701017|gb|EHH29038.1| Protocadherin-68 [Macaca mulatta]
gi|387539438|gb|AFJ70346.1| protocadherin-17 precursor [Macaca mulatta]
Length = 1159
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 15/74 (20%)
Query: 36 AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSL 95
A D D G NG V Y I+PS +IG V Y+Y S+N P G + RS
Sbjct: 496 AQDPDLGQNGTVSYSILPS---HIGD-----------VSIYTYVSVN-PTNGAIYALRSF 540
Query: 96 DFEKTQRYLVTIVA 109
+FE+T+ + ++A
Sbjct: 541 NFEQTKAFEFKVLA 554
>gi|411024220|pdb|4AQE|A Chain A, Crystal Structure Of Deafness Associated Mutant Mouse
Cadherin-23 Ec1-2s70p And Protocadherin-15 Ec1-2 Form I
Length = 214
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 44/96 (45%), Gaps = 23/96 (23%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P VR+ + TPVG+ IF + A D D G G V Y P
Sbjct: 114 PYSVRIPENTPVGTPIFI-VNATDPDLGAGGSVLYSFQPPS------------------- 153
Query: 75 GYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+F+I+ +G VTV + LD+E TQ Y +T+ A+
Sbjct: 154 --PFFAIDS-ARGIVTVIQELDYEVTQAYQLTVNAT 186
>gi|402902128|ref|XP_003913973.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-17-like [Papio
anubis]
Length = 1137
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 15/74 (20%)
Query: 36 AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSL 95
A D D G NG V Y I+PS +IG V Y+Y S+N P G + RS
Sbjct: 496 AQDPDLGQNGTVSYSILPS---HIGD-----------VSIYTYVSVN-PTNGAIYALRSF 540
Query: 96 DFEKTQRYLVTIVA 109
+FE+T+ + ++A
Sbjct: 541 NFEQTKAFEFKVLA 554
>gi|351712831|gb|EHB15750.1| Cadherin-23 [Heterocephalus glaber]
Length = 3280
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 40/85 (47%), Gaps = 23/85 (27%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
PVG+ I + A DAD+G L+EY + DG GK F+IN P
Sbjct: 2342 PVGTVILM-VTATDADSGSFALIEYSL----------GDGEGK-----------FAIN-P 2378
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVA 109
G + V SLD EK Y++T +A
Sbjct: 2379 TTGDIYVVSSLDREKKDHYILTALA 2403
Score = 34.7 bits (78), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 41/88 (46%), Gaps = 25/88 (28%)
Query: 24 TPVGSTIFKNLRAVDADAGVNGLVEY-FIVPSQDKNIGTADGVGKDRVTVVDGYSYFSIN 82
TPVG+ IF + A D D G G V Y F PSQ +F+I+
Sbjct: 3 TPVGTPIFI-VNATDPDLGAGGSVLYSFQPPSQ----------------------FFAID 39
Query: 83 LPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+G V V R LD+E TQ Y +T+ A+
Sbjct: 40 -SARGIVIVIRELDYETTQAYQLTVNAT 66
>gi|297787787|pdb|3MVS|A Chain A, Structure Of The N-Terminus Of Cadherin 23
Length = 210
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 44/96 (45%), Gaps = 23/96 (23%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P VR+ + TPVG+ IF + A D D G G V Y P
Sbjct: 113 PYSVRIPENTPVGTPIFI-VNATDPDLGAGGSVLYSFQPPS------------------- 152
Query: 75 GYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+F+I+ +G VTV + LD+E TQ Y +T+ A+
Sbjct: 153 --PFFAID-SARGIVTVIQELDYEVTQAYQLTVNAT 185
>gi|294979311|pdb|2WD0|A Chain A, Crystal Structure Of Nonsyndromic Deafness (Dfnb12)
Associated Mutant D124g Of Mouse Cadherin-23 Ec1-2
gi|294979312|pdb|2WD0|C Chain C, Crystal Structure Of Nonsyndromic Deafness (Dfnb12)
Associated Mutant D124g Of Mouse Cadherin-23 Ec1-2
gi|411024218|pdb|4AQA|A Chain A, Crystal Structure Of Deafness Associated Mutant Mouse
Cadherin-23 Ec1-2d124g And Protocadherin-15 Ec1-2 Form I
Length = 214
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 44/96 (45%), Gaps = 23/96 (23%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P VR+ + TPVG+ IF + A D D G G V Y P
Sbjct: 114 PYSVRIPENTPVGTPIFI-VNATDPDLGAGGSVLYSFQPPS------------------- 153
Query: 75 GYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+F+I+ +G VTV + LD+E TQ Y +T+ A+
Sbjct: 154 --PFFAID-SARGIVTVIQELDYEVTQAYQLTVNAT 186
>gi|94538350|ref|NP_001035519.1| protocadherin-17 precursor [Homo sapiens]
gi|118572683|sp|O14917.2|PCD17_HUMAN RecName: Full=Protocadherin-17; AltName: Full=Protocadherin-68;
Flags: Precursor
gi|54673582|gb|AAH28165.1| Protocadherin 17 [Homo sapiens]
gi|119572445|gb|EAW52060.1| protocadherin 17, isoform CRA_b [Homo sapiens]
gi|158260983|dbj|BAF82669.1| unnamed protein product [Homo sapiens]
Length = 1159
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 15/74 (20%)
Query: 36 AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSL 95
A D D G NG V Y I+PS +IG V Y+Y S+N P G + RS
Sbjct: 496 AQDPDLGQNGTVSYSILPS---HIGD-----------VSIYTYVSVN-PTNGAIYALRSF 540
Query: 96 DFEKTQRYLVTIVA 109
+FE+T+ + ++A
Sbjct: 541 NFEQTKAFEFKVLA 554
>gi|355691687|gb|EHH26872.1| hypothetical protein EGK_16950 [Macaca mulatta]
Length = 732
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 15/68 (22%)
Query: 36 AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSL 95
A D D+G N LV Y ++PSQD ++ A S SIN G + RSL
Sbjct: 475 ATDRDSGTNALVTYSLLPSQDPHLPLA--------------SLVSINT-DNGHLFALRSL 519
Query: 96 DFEKTQRY 103
D+E Q +
Sbjct: 520 DYEALQEF 527
>gi|348582951|ref|XP_003477239.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-12-like [Cavia
porcellus]
Length = 1180
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 37/81 (45%), Gaps = 17/81 (20%)
Query: 29 TIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQ 88
T+ NL A D D G NG VE+F+ GK V FS+N GQ
Sbjct: 261 TLLINLTATDPDQGPNGEVEFFL--------------GKHMPPEV--LHTFSVN-AKTGQ 303
Query: 89 VTVNRSLDFEKTQRYLVTIVA 109
VT+ + LD+EK Y V + A
Sbjct: 304 VTLRQPLDYEKNPAYEVDVQA 324
>gi|294979310|pdb|2WCP|A Chain A, Crystal Structure Of Mouse Cadherin-23 Ec1-2
gi|294979325|pdb|2WHV|A Chain A, Crystal Structure Of Mouse Cadherin-23 Ec1-2 (all Cation
Binding Sites Occupied By Calcium)
gi|411024212|pdb|4APX|A Chain A, Crystal Structure Of Mouse Cadherin-23 Ec1-2 And
Protocadherin-15 Ec1-2 Form I
gi|411024214|pdb|4AQ8|A Chain A, Crystal Structure Of Mouse Cadherin-23 Ec1-2 And
Protocadherin-15 Ec1-2 Form Ii
gi|411024215|pdb|4AQ8|B Chain B, Crystal Structure Of Mouse Cadherin-23 Ec1-2 And
Protocadherin-15 Ec1-2 Form Ii
gi|411024222|pdb|4AXW|A Chain A, Crystal Structure Of Mouse Cadherin-23 Ec1-2 And
Protocadherin-15 Ec1-2, Form I 2.2a
Length = 214
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 44/96 (45%), Gaps = 23/96 (23%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P VR+ + TPVG+ IF + A D D G G V Y P
Sbjct: 114 PYSVRIPENTPVGTPIFI-VNATDPDLGAGGSVLYSFQPPS------------------- 153
Query: 75 GYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+F+I+ +G VTV + LD+E TQ Y +T+ A+
Sbjct: 154 --PFFAID-SARGIVTVIQELDYEVTQAYQLTVNAT 186
>gi|114649929|ref|XP_522770.2| PREDICTED: protocadherin-17 [Pan troglodytes]
gi|397509954|ref|XP_003825373.1| PREDICTED: protocadherin-17 [Pan paniscus]
Length = 1159
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 15/74 (20%)
Query: 36 AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSL 95
A D D G NG V Y I+PS +IG V Y+Y S+N P G + RS
Sbjct: 496 AQDPDLGQNGTVSYSILPS---HIGD-----------VSIYTYVSVN-PTNGAIYALRSF 540
Query: 96 DFEKTQRYLVTIVA 109
+FE+T+ + ++A
Sbjct: 541 NFEQTKAFEFKVLA 554
>gi|47209298|emb|CAF94673.1| unnamed protein product [Tetraodon nigroviridis]
Length = 3417
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 18/84 (21%)
Query: 27 GSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQ 86
G T+ ++A DAD G+NG V Y I ++ + F+IN
Sbjct: 2920 GGTVVTTVKATDADTGLNGEVSYSIA-----------------YVAIEASNLFAIN-SQT 2961
Query: 87 GQVTVNRSLDFEKTQRYLVTIVAS 110
G++ LDFEK++ Y + + AS
Sbjct: 2962 GEIKAVGKLDFEKSKTYQLNVQAS 2985
>gi|242024810|ref|XP_002432819.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212518328|gb|EEB20081.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 1972
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 11/96 (11%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P + + + TPVG IF N+ D D G+NG V P D+ T D + + +
Sbjct: 147 PYSISLFENTPVGKVIFDNITVQDKDGGINGDVILSCTPPDDETCKTFDVTTE---KLAE 203
Query: 75 GYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
G +G +T+ + LD+E Y +++ A+
Sbjct: 204 GL--------FKGVITLLKPLDYESRTSYSLSVKAT 231
>gi|260830788|ref|XP_002610342.1| hypothetical protein BRAFLDRAFT_72456 [Branchiostoma floridae]
gi|229295707|gb|EEN66352.1| hypothetical protein BRAFLDRAFT_72456 [Branchiostoma floridae]
Length = 3154
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 17/95 (17%)
Query: 16 VIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEY-FIVPSQDKNIGTADGVGKDRVTVVD 74
+ V V + +P G +++ AVD D G+NG+V Y F +P+ G++R
Sbjct: 2491 MTVSVPENSPSGHFVYQAF-AVDEDTGINGIVSYDFFIPN-----------GRERGG--- 2535
Query: 75 GYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
+ F+I+ P G +T LD E Y + IVA
Sbjct: 2536 DWEKFAID-PFSGNITTVEPLDRELQAEYTLIIVA 2569
>gi|395745398|ref|XP_002824363.2| PREDICTED: LOW QUALITY PROTEIN: protocadherin-17-like [Pongo
abelii]
Length = 1205
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 15/74 (20%)
Query: 36 AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSL 95
A D D G NG V Y I+PS +IG V Y+Y S+N P G + RS
Sbjct: 496 AQDPDLGQNGTVSYSILPS---HIGD-----------VSIYTYVSVN-PTNGAIYALRSF 540
Query: 96 DFEKTQRYLVTIVA 109
+FE+T+ + ++A
Sbjct: 541 NFEQTKAFEFKVLA 554
>gi|345319681|ref|XP_003430184.1| PREDICTED: cadherin-23 [Ornithorhynchus anatinus]
Length = 2471
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 35/57 (61%), Gaps = 4/57 (7%)
Query: 12 RTIPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFI---VPSQDKNIGTADGV 65
+ +P + V + P GS++F+ + AVD D G+NGLV Y + +P D +I ++ G+
Sbjct: 323 QNLPSVAEVPEGIPAGSSVFQ-VVAVDLDEGLNGLVTYRMQVGMPRMDFSINSSSGL 378
>gi|4323225|gb|AAD16267.1| cadherin [Gallus gallus]
Length = 142
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 15/74 (20%)
Query: 36 AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSL 95
A D D G+NG V Y IVPSQ +++ ++Y SIN P+ G + RS
Sbjct: 63 ARDPDLGLNGSVSYQIVPSQVRDMPV--------------FTYVSIN-PNSGDIYALRSF 107
Query: 96 DFEKTQRYLVTIVA 109
+ E+T+ + ++A
Sbjct: 108 NHEQTKAFEFKVLA 121
>gi|443732014|gb|ELU16906.1| hypothetical protein CAPTEDRAFT_32685, partial [Capitella teleta]
Length = 709
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 18/92 (19%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V + + TP + I + LRA DAD GVNG V+Y + G G+
Sbjct: 225 VTIDENTPRLTNIIQ-LRAQDADWGVNGKVQYSLSARSASTYGHLFGIHNS--------- 274
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
GQV V ++DFE + Y +TIVA
Sbjct: 275 --------TGQVFVKGAVDFESSPSYHLTIVA 298
>gi|441614468|ref|XP_003257449.2| PREDICTED: LOW QUALITY PROTEIN: protocadherin-17 [Nomascus
leucogenys]
Length = 1213
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 15/74 (20%)
Query: 36 AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSL 95
A D D G NG V Y I+PS +IG V Y+Y S+N P G + RS
Sbjct: 467 AQDPDLGQNGTVSYSILPS---HIGD-----------VSIYTYVSVN-PTNGAIYALRSF 511
Query: 96 DFEKTQRYLVTIVA 109
+FE+T+ + ++A
Sbjct: 512 NFEQTKAFEFKVLA 525
>gi|109504669|ref|XP_214434.4| PREDICTED: cadherin-related family member 2-like [Rattus
norvegicus]
gi|293342620|ref|XP_001070261.2| PREDICTED: cadherin-related family member 2-like [Rattus
norvegicus]
Length = 1310
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 33/63 (52%), Gaps = 10/63 (15%)
Query: 5 VKVSNRKRTIPVIVR------VSDLTPVGSTIFKNLRAVDADAGVNGLVEYFI---VPSQ 55
V V +R PV + + + PVGS +F L A D D G +GLVEYFI +PS
Sbjct: 113 VIVEDRNDNAPVFLNTEFSTSIKETLPVGSVVFSVL-AEDKDTGSSGLVEYFIEKVIPST 171
Query: 56 DKN 58
D +
Sbjct: 172 DNS 174
>gi|110347562|ref|NP_031692.2| cadherin-6 precursor [Mus musculus]
gi|341940302|sp|P97326.2|CADH6_MOUSE RecName: Full=Cadherin-6; AltName: Full=Kidney cadherin;
Short=K-cadherin; Flags: Precursor
gi|76825288|gb|AAI07014.1| Cdh6 protein [Mus musculus]
Length = 790
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 17/92 (18%)
Query: 19 RVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSY 78
+ + +P G+ I + ++A DAD G N +EY I DG G + V+
Sbjct: 276 KTPESSPPGTPIGR-IKASDADVGENAEIEYSIT----------DGEGHEMFDVI----- 319
Query: 79 FSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ +G +TV + LDFEK + Y + + AS
Sbjct: 320 -TDQETQEGIITVKKLLDFEKKKVYTLKVEAS 350
>gi|76827148|gb|AAI07009.1| Cdh6 protein [Mus musculus]
gi|148671304|gb|EDL03251.1| cadherin 6 [Mus musculus]
Length = 790
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 17/92 (18%)
Query: 19 RVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSY 78
+ + +P G+ I + ++A DAD G N +EY I DG G + V+
Sbjct: 276 KTPESSPPGTPIGR-IKASDADVGENAEIEYSIT----------DGEGHEMFDVI----- 319
Query: 79 FSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ +G +TV + LDFEK + Y + + AS
Sbjct: 320 -TDQETQEGIITVKKLLDFEKKKVYTLKVEAS 350
>gi|74210196|dbj|BAE23328.1| unnamed protein product [Mus musculus]
Length = 785
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 23/94 (24%)
Query: 20 VSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYF 79
V + PV S + + ++A DAD GVN +EY IV DG DG F
Sbjct: 271 VPESLPVASVVAR-IKAADADIGVNAEMEYKIV----------DG---------DGLGIF 310
Query: 80 SINLP---HQGQVTVNRSLDFEKTQRYLVTIVAS 110
I+ +G +T+ + LDFE Y + I A+
Sbjct: 311 KISADKDTQEGIITIQKELDFEAKTSYTLRIEAA 344
>gi|348560794|ref|XP_003466198.1| PREDICTED: cadherin-related family member 1-like [Cavia porcellus]
Length = 857
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 44/97 (45%), Gaps = 24/97 (24%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P +V V + TP GS++FK + AVD D G G V YF+ DR
Sbjct: 139 PYVVLVPEDTPAGSSLFK-VHAVDRDTGSGGSVTYFLQSLHPTKFAM------DR----- 186
Query: 75 GYSYFSINLPHQG--QVTVNRSLDFEKTQRYLVTIVA 109
H G ++ +LD+E+++ + +T+VA
Sbjct: 187 ----------HSGVLRLQAGATLDYEESRTHFLTVVA 213
>gi|190338128|gb|AAI62806.1| Cdh7 protein [Danio rerio]
Length = 787
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 17/91 (18%)
Query: 20 VSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYF 79
V + PV S + K ++A+D+D G N ++Y I+ DG+G RVT
Sbjct: 268 VPESLPVASVVAK-IKALDSDIGPNAEMDYRII--------EGDGLGVFRVTTDKDT--- 315
Query: 80 SINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+G +T+ ++LDFE Y + I AS
Sbjct: 316 -----QEGVITLQKNLDFETKSSYTLKIEAS 341
>gi|426375605|ref|XP_004054620.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-17 [Gorilla gorilla
gorilla]
Length = 1166
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 15/74 (20%)
Query: 36 AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSL 95
A D D G NG V Y I+PS +IG V Y+Y S+N P G + RS
Sbjct: 467 AQDPDLGQNGTVSYSILPS---HIGD-----------VSIYTYVSVN-PTNGAIYALRSF 511
Query: 96 DFEKTQRYLVTIVA 109
+FE+T+ + ++A
Sbjct: 512 NFEQTKAFEFKVLA 525
>gi|363738275|ref|XP_425119.3| PREDICTED: neural-cadherin-like [Gallus gallus]
Length = 2503
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 14 IPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIV 52
P + VS G+ ++K L AVDAD G+NG VEYF++
Sbjct: 4 FPFLAVVSPQATEGTEVYK-LLAVDADEGINGTVEYFLL 41
>gi|350397190|ref|XP_003484800.1| PREDICTED: cadherin-89D-like [Bombus impatiens]
Length = 1913
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 21/98 (21%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAG--VNGLVEYFIVPSQDKNIGTADGVGKDRVTV 72
P V V +LTPVG TIF+ + AVD D N V Y IV ++ GK
Sbjct: 125 PYHVTVDELTPVGVTIFRGIHAVDGDKPNTPNSDVHYAIVKGNEQ--------GK----- 171
Query: 73 VDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
FS+ H+ + + + +D++ R ++A+
Sbjct: 172 ------FSLESGHRTALILRKPVDYDNGDREFTLVIAA 203
>gi|355562512|gb|EHH19106.1| hypothetical protein EGK_19751 [Macaca mulatta]
Length = 3359
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 48/102 (47%), Gaps = 30/102 (29%)
Query: 15 PVIVRVSDL-----TPVGSTIFKNLRAVDADAGVNGLVEY-FIVPSQDKNIGTADGVGKD 68
P VR+ ++ TPVG+ IF + A D D G G V Y F PSQ
Sbjct: 136 PYSVRIPEVGATRNTPVGTPIFI-VNATDPDLGAGGSVLYSFQPPSQ------------- 181
Query: 69 RVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+F+I+ +G +TV R LD+E TQ Y +T+ A+
Sbjct: 182 ---------FFAID-SARGIITVIRELDYETTQAYQLTVNAT 213
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 40/85 (47%), Gaps = 23/85 (27%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
PVG+ I + A DAD+G L+EY + DG GK F+IN P
Sbjct: 2421 PVGTVILT-VTATDADSGNFALIEYSL----------GDGEGK-----------FAIN-P 2457
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVA 109
G + V SLD EK Y++T +A
Sbjct: 2458 TTGDIYVLSSLDREKKDHYILTALA 2482
>gi|27370290|ref|NP_766441.1| cadherin-7 precursor [Mus musculus]
gi|81913388|sp|Q8BM92.1|CADH7_MOUSE RecName: Full=Cadherin-7; Flags: Precursor
gi|26329695|dbj|BAC28586.1| unnamed protein product [Mus musculus]
Length = 785
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 23/94 (24%)
Query: 20 VSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYF 79
V + PV S + + ++A DAD GVN +EY IV DG DG F
Sbjct: 271 VPESLPVASVVAR-IKAADADIGVNAEMEYKIV----------DG---------DGLGIF 310
Query: 80 SINLP---HQGQVTVNRSLDFEKTQRYLVTIVAS 110
I+ +G +T+ + LDFE Y + I A+
Sbjct: 311 KISADKDTQEGIITIQKELDFEAKTSYTLRIEAA 344
>gi|355782853|gb|EHH64774.1| hypothetical protein EGM_18085 [Macaca fascicularis]
Length = 3359
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 48/102 (47%), Gaps = 30/102 (29%)
Query: 15 PVIVRVSDL-----TPVGSTIFKNLRAVDADAGVNGLVEY-FIVPSQDKNIGTADGVGKD 68
P VR+ ++ TPVG+ IF + A D D G G V Y F PSQ
Sbjct: 136 PYSVRIPEVGATRNTPVGTPIFI-VNATDPDLGAGGSVLYSFQPPSQ------------- 181
Query: 69 RVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+F+I+ +G +TV R LD+E TQ Y +T+ A+
Sbjct: 182 ---------FFAID-SARGIITVIRELDYETTQAYQLTVNAT 213
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 40/85 (47%), Gaps = 23/85 (27%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
PVG+ I + A DAD+G L+EY + DG GK F+IN P
Sbjct: 2421 PVGTVILT-VTATDADSGNFALIEYSL----------GDGEGK-----------FAIN-P 2457
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVA 109
G + V SLD EK Y++T +A
Sbjct: 2458 TTGDIYVLSSLDREKKDHYILTALA 2482
>gi|354481305|ref|XP_003502842.1| PREDICTED: cadherin-7 [Cricetulus griseus]
Length = 785
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 23/94 (24%)
Query: 20 VSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYF 79
V + PV S + + ++A DAD GVN +EY IV DG DG F
Sbjct: 271 VPESLPVASVVAR-IKAADADIGVNAEMEYKIV----------DG---------DGLGIF 310
Query: 80 SINLP---HQGQVTVNRSLDFEKTQRYLVTIVAS 110
I+ +G +T+ + LDFE Y + I A+
Sbjct: 311 KISADKDTQEGIITIQKELDFEAKTSYTLRIEAA 344
>gi|351713329|gb|EHB16248.1| Protocadherin Fat 3 [Heterocephalus glaber]
Length = 1039
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 25/98 (25%)
Query: 12 RTIPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVT 71
++ P V V + PVG+ I N++A DAD+G NG V + T
Sbjct: 660 KSFPSDVAVKENLPVGANIL-NIKAYDADSGFNGKVLF---------------------T 697
Query: 72 VVDGY--SYFSINLPHQGQVTVNRSLDFEKTQRYLVTI 107
+ DG S F+I++ GQ+ V +D E T YL+ I
Sbjct: 698 ISDGNTDSCFNIDM-ETGQLKVLMPMDREHTDLYLLNI 734
>gi|340725720|ref|XP_003401214.1| PREDICTED: cadherin-89D-like [Bombus terrestris]
Length = 1913
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 21/98 (21%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAG--VNGLVEYFIVPSQDKNIGTADGVGKDRVTV 72
P V V +LTPVG TIF+ + AVD D N V Y IV ++ GK
Sbjct: 125 PYHVTVDELTPVGVTIFRGIHAVDGDKPNTPNSDVHYAIVKGNEQ--------GK----- 171
Query: 73 VDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
FS+ H+ + + + +D++ R ++A+
Sbjct: 172 ------FSLESGHRTALILRKPVDYDNGDREFTLVIAA 203
>gi|449277761|gb|EMC85812.1| Cadherin-23, partial [Columba livia]
Length = 3246
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 45/101 (44%), Gaps = 23/101 (22%)
Query: 10 RKRTIPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDR 69
R P VR+ + TPVG+ IF + A D D G G V Y P +
Sbjct: 83 RFHNQPYSVRIPENTPVGTPIFI-VNATDPDQGAGGSVLYSFQPPSN------------- 128
Query: 70 VTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+F+I+ +G V+V R LD+E TQ Y + + A+
Sbjct: 129 --------FFAID-SGRGIVSVIRELDYEVTQAYQLQVNAT 160
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 23/85 (27%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
P+G+ I + ++A DAD+G L++Y + DG GK F IN P
Sbjct: 2338 PLGTVILR-VKATDADSGRFALIQYSL----------GDGEGK-----------FGIN-P 2374
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVA 109
+ G + + +LD EK Y +T VA
Sbjct: 2375 NTGDIYILSALDREKKDHYTLTAVA 2399
Score = 35.0 bits (79), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 38/86 (44%), Gaps = 23/86 (26%)
Query: 24 TPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINL 83
T VG+T+ + + A D D G G V YF D+ FS++
Sbjct: 423 TTVGTTVLQ-VHATDNDVGTYGKVSYFFSDDPDR---------------------FSLD- 459
Query: 84 PHQGQVTVNRSLDFEKTQRYLVTIVA 109
G + + LDFE TQRY +TI+A
Sbjct: 460 KDTGVILLTARLDFETTQRYTLTIIA 485
>gi|291384089|ref|XP_002708683.1| PREDICTED: FAT tumor suppressor homolog 3 [Oryctolagus cuniculus]
Length = 4559
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 25/98 (25%)
Query: 12 RTIPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVT 71
++ P V V + PVG+ I K ++A DAD+G NG V + T
Sbjct: 727 KSFPSDVAVKEDMPVGANILK-IKAYDADSGFNGKVLF---------------------T 764
Query: 72 VVDGY--SYFSINLPHQGQVTVNRSLDFEKTQRYLVTI 107
+ DG S F+I++ GQ+ V +D E T YL+ I
Sbjct: 765 ISDGNTDSCFNIDM-ETGQLKVLMPMDREHTDLYLLNI 801
>gi|148676983|gb|EDL08930.1| mCG123390, isoform CRA_d [Mus musculus]
gi|148676984|gb|EDL08931.1| mCG123390, isoform CRA_d [Mus musculus]
Length = 789
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 17/95 (17%)
Query: 16 VIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
+ +RV + +PVG+ + +++A DAD G N V+Y I+ DG G D ++
Sbjct: 275 IHLRVLESSPVGTAV-GSVKATDADTGKNAEVDYRII----------DGDGTDMFDII-- 321
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ +G +TV + LD+E + Y + + A
Sbjct: 322 ----TEKDTQEGIITVKKPLDYENRRLYTLKVEAE 352
>gi|363747345|ref|XP_003643989.1| PREDICTED: protocadherin gamma-A8-like, partial [Gallus gallus]
Length = 349
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 19/86 (22%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
VRV + PVGST+ + + A D D G+NG ++Y DK +
Sbjct: 250 VRVPEDVPVGSTLLR-VTATDPDDGINGNIQYSFPEISDK-----------------ASN 291
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRY 103
F + P G + + R+LDFE+ Y
Sbjct: 292 IFHLE-PETGAIRLVRNLDFEERSFY 316
>gi|338713598|ref|XP_001917824.2| PREDICTED: LOW QUALITY PROTEIN: protocadherin beta-8-like [Equus
caballus]
Length = 760
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 19/92 (20%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V++ + +P+G I + A DAD G NG + Y + + ++ T
Sbjct: 249 VQIPEDSPIGFLIV-TVSATDADIGANGEISYSLFQAPEEISKT---------------- 291
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
F IN P G++ + + LDFE Q Y V I A
Sbjct: 292 -FEIN-PKTGEIRLKKQLDFETVQSYEVNIEA 321
>gi|326917137|ref|XP_003204858.1| PREDICTED: cadherin-12-like, partial [Meleagris gallopavo]
Length = 522
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 43/96 (44%), Gaps = 23/96 (23%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
++V + + VGS I + +RAVD D G N +EY IVP DG +
Sbjct: 4 LKVPESSHVGSAIGR-IRAVDPDFGKNAEIEYNIVPG-------------------DGGN 43
Query: 78 YFSINLP---HQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I +G + + + LDFE + Y + AS
Sbjct: 44 LFDITTDENTQEGVIKLKKPLDFETKKAYTFKVEAS 79
>gi|449272686|gb|EMC82483.1| Cadherin-12 [Columba livia]
Length = 794
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 43/96 (44%), Gaps = 23/96 (23%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
++V + + VGS I + +RAVD D G N +EY IVP DG +
Sbjct: 276 LKVPESSHVGSAIGR-IRAVDPDFGQNAEIEYNIVPG-------------------DGGN 315
Query: 78 YFSINLP---HQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I +G + + + LDFE + Y + AS
Sbjct: 316 LFDITTDENTQEGVIKLKKPLDFETKKAYTFKVEAS 351
>gi|116875770|ref|NP_001070916.1| cadherin-7 [Danio rerio]
gi|89242690|gb|ABD64678.1| cadherin-7 type II [Danio rerio]
Length = 787
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 17/91 (18%)
Query: 20 VSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYF 79
V + PV S + K ++A+D+D G N ++Y I+ DG+G RVT
Sbjct: 268 VPESLPVASVVAK-IKALDSDIGPNAEMDYRII--------EGDGLGVFRVTTDKDT--- 315
Query: 80 SINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+G +T+ ++LDFE Y + I AS
Sbjct: 316 -----QEGVITLQKNLDFETKSSYTLKIEAS 341
>gi|341896095|gb|EGT52030.1| hypothetical protein CAEBREN_12407 [Caenorhabditis brenneri]
Length = 4597
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Query: 13 TIPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFI--VPSQDKNIGTAD 63
+ P +V V++ P+G+ + K L+A D D+G NGL+ Y I +P + T D
Sbjct: 605 SFPEVVEVTEDAPIGTVVAK-LQATDEDSGYNGLIRYTIHDLPGSSHEVLTVD 656
>gi|147906821|ref|NP_001079607.1| protocadherin gamma subfamily A, 2 [Xenopus laevis]
gi|28175715|gb|AAH45118.1| MGC53493 protein [Xenopus laevis]
Length = 927
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 17/82 (20%)
Query: 28 STIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQG 87
+T+ L A D D G+NG +EYF D T+ F++N G
Sbjct: 258 NTVILKLNATDQDEGLNGEIEYFF----------------DYDTLKSVKEIFTLNQ-QSG 300
Query: 88 QVTVNRSLDFEKTQRYLVTIVA 109
+++VN +DFE+ + Y +++ A
Sbjct: 301 EISVNGVIDFEEKEFYEISVRA 322
>gi|124249202|ref|NP_033995.1| cadherin-10 precursor [Mus musculus]
gi|341940565|sp|P70408.3|CAD10_MOUSE RecName: Full=Cadherin-10; AltName: Full=T2-cadherin; Flags:
Precursor
gi|74216076|dbj|BAE23714.1| unnamed protein product [Mus musculus]
Length = 788
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 17/95 (17%)
Query: 16 VIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
+ +RV + +PVG+ + +++A DAD G N V+Y I+ DG G D ++
Sbjct: 274 IHLRVLESSPVGTAV-GSVKATDADTGKNAEVDYRII----------DGDGTDMFDII-- 320
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ +G +TV + LD+E + Y + + A
Sbjct: 321 ----TEKDTQEGIITVKKPLDYENRRLYTLKVEAE 351
>gi|334330616|ref|XP_001369584.2| PREDICTED: protocadherin Fat 3 [Monodelphis domestica]
Length = 4557
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 47/98 (47%), Gaps = 25/98 (25%)
Query: 12 RTIPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVT 71
++ P + V + PVG+ I K ++A DAD+G NG V + T
Sbjct: 727 KSFPSDIAVKEDLPVGANILK-IKAFDADSGFNGKVVF---------------------T 764
Query: 72 VVDGY--SYFSINLPHQGQVTVNRSLDFEKTQRYLVTI 107
+ DG S F+I++ GQ+ V +D E+T YL+ I
Sbjct: 765 ISDGNTDSCFNIDM-ETGQLKVLMPMDREQTDLYLLNI 801
>gi|18369837|gb|AAL67951.1|AF183946_1 transmembrane glycoprotein cadherin-10 [Mus musculus]
Length = 788
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 17/95 (17%)
Query: 16 VIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
+ +RV + +PVG+ + +++A DAD G N V+Y I+ DG G D ++
Sbjct: 274 IHLRVLESSPVGTAV-GSVKATDADTGKNAEVDYRII----------DGDGTDMFDII-- 320
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ +G +TV + LD+E + Y + + A
Sbjct: 321 ----TEKDTQEGIITVKKPLDYENRRLYTLKVEAE 351
>gi|187954825|gb|AAI41148.1| Pcdhb5 protein [Mus musculus]
Length = 792
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 45/96 (46%), Gaps = 19/96 (19%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P V+V + +P S + L A DADAG G V Y + + D+ T
Sbjct: 245 PYEVQVLESSPPDSPVLTVL-AQDADAGNFGRVSYGLFQASDEIQKT------------- 290
Query: 75 GYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
FSIN G++ + + LDFEKT+ Y V I A+
Sbjct: 291 ----FSIN-EFTGEIRLKKKLDFEKTESYHVEIEAT 321
>gi|432099002|gb|ELK28484.1| Protocadherin Fat 1 [Myotis davidii]
Length = 3387
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 42/86 (48%), Gaps = 18/86 (20%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
P GS + + +RA D D+G NG V Y + SQ V V++ F+IN+
Sbjct: 1823 PGGSRVIQ-VRASDLDSGANGQVMYSLDQSQ-------------SVEVIES---FAINM- 1864
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVAS 110
G +T + LD EK Y + +VAS
Sbjct: 1865 ETGWITTLKELDHEKRDSYQIKVVAS 1890
>gi|274323706|ref|NP_001162102.1| cadherin-10 precursor [Rattus norvegicus]
Length = 788
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 17/95 (17%)
Query: 16 VIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
+ +RV + +PVG+ + +++A DAD G N V+Y I+ DG G D ++
Sbjct: 274 IHLRVLESSPVGTAV-GSVKATDADTGKNAEVDYRII----------DGDGTDMFDII-- 320
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ +G +TV + LD+E + Y + + A
Sbjct: 321 ----TEKDTQEGIITVKKPLDYENRRLYTLKVEAE 351
>gi|42490812|gb|AAH66179.1| LOC633332 protein [Mus musculus]
Length = 792
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 45/96 (46%), Gaps = 19/96 (19%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P V+V + +P S + L A DADAG G V Y + + D+ T
Sbjct: 245 PYEVQVLESSPPDSPVLTVL-AQDADAGNFGRVSYGLFQASDEIQKT------------- 290
Query: 75 GYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
FSIN G++ + + LDFEKT+ Y V I A+
Sbjct: 291 ----FSIN-EFTGEIRLKKKLDFEKTESYHVEIEAT 321
>gi|30354729|gb|AAH52056.1| Cadherin 10 [Mus musculus]
gi|38565914|gb|AAH62962.1| Cadherin 10 [Mus musculus]
Length = 788
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 17/95 (17%)
Query: 16 VIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
+ +RV + +PVG+ + +++A DAD G N V+Y I+ DG G D ++
Sbjct: 274 IHLRVLESSPVGTAV-GSVKATDADTGKNAEVDYRII----------DGDGTDMFDII-- 320
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ +G +TV + LD+E + Y + + A
Sbjct: 321 ----TEKDTQEGIITVKKPLDYENRRLYTLKVEAE 351
>gi|148676980|gb|EDL08927.1| mCG123390, isoform CRA_a [Mus musculus]
Length = 769
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 17/95 (17%)
Query: 16 VIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
+ +RV + +PVG+ + +++A DAD G N V+Y I+ DG G D ++
Sbjct: 255 IHLRVLESSPVGTAV-GSVKATDADTGKNAEVDYRII----------DGDGTDMFDII-- 301
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ +G +TV + LD+E + Y + + A
Sbjct: 302 ----TEKDTQEGIITVKKPLDYENRRLYTLKVEAE 332
>gi|2599502|gb|AAB84144.1| protocadherin 68 [Homo sapiens]
Length = 889
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 15/74 (20%)
Query: 36 AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSL 95
A D D G NG V Y I+PS IG V Y+Y S+N P G + RS
Sbjct: 496 AQDPDLGQNGTVSYSILPSH---IGD-----------VSIYTYVSVN-PTNGAIYALRSF 540
Query: 96 DFEKTQRYLVTIVA 109
+FE+T+ + ++A
Sbjct: 541 NFEQTKAFEFKVLA 554
>gi|363730470|ref|XP_418999.3| PREDICTED: cadherin-12 [Gallus gallus]
Length = 859
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 43/96 (44%), Gaps = 23/96 (23%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
++V + + VGS I + +RAVD D G N +EY IVP DG +
Sbjct: 341 LKVPESSHVGSAIGR-IRAVDPDFGKNAEIEYNIVPG-------------------DGGN 380
Query: 78 YFSINLP---HQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I +G + + + LDFE + Y + AS
Sbjct: 381 LFDITTDENTQEGVIKLKKPLDFETKKAYTFKVEAS 416
>gi|345799013|ref|XP_853425.2| PREDICTED: cadherin-related family member 1 [Canis lupus
familiaris]
Length = 913
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 24/97 (24%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P +V+V + P GS++ K + AVD D G G V YF+ +Q
Sbjct: 188 PYMVQVPEDIPPGSSLIK-VHAVDKDTGSGGSVTYFLQSAQ------------------- 227
Query: 75 GYSYFSINLPHQG--QVTVNRSLDFEKTQRYLVTIVA 109
+ F+++ H G ++ +LD+EK + ++VT+VA
Sbjct: 228 -ATVFAVDR-HSGVLRLRAGATLDYEKARAHVVTVVA 262
>gi|149026447|gb|EDL82597.1| cadherin 10, isoform CRA_b [Rattus norvegicus]
Length = 769
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 17/95 (17%)
Query: 16 VIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
+ +RV + +PVG+ + +++A DAD G N V+Y I+ DG G D ++
Sbjct: 255 IHLRVLESSPVGTAV-GSVKATDADTGKNAEVDYRII----------DGDGTDMFDII-- 301
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ +G +TV + LD+E + Y + + A
Sbjct: 302 ----TEKDTQEGIITVKKPLDYENRRLYTLKVEAE 332
>gi|327270433|ref|XP_003219994.1| PREDICTED: protocadherin beta-16-like [Anolis carolinensis]
Length = 811
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 15/81 (18%)
Query: 30 IFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQV 89
+ ++ AVD D NG+V Y I+P +IGT+ SY SIN G +
Sbjct: 444 LLGSIYAVDLDTDQNGMVTYSILPG---DIGTSPAA-----------SYISIN-SETGNM 488
Query: 90 TVNRSLDFEKTQRYLVTIVAS 110
RSLD+E+ + + +T+ A+
Sbjct: 489 YALRSLDYEQIKDFRITVRAT 509
>gi|58865998|ref|NP_001012215.1| protocadherin gamma-B7 precursor [Rattus norvegicus]
gi|56269452|gb|AAH87084.1| Protocadherin gamma subfamily B, 7 [Rattus norvegicus]
gi|149017342|gb|EDL76393.1| rCG49295, isoform CRA_ac [Rattus norvegicus]
Length = 931
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 19/92 (20%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
VRV + P G+T+ + LRA D D G+N Y +G A+ +
Sbjct: 249 VRVREDLPPGTTVLR-LRATDQDEGINAEFTYSF-------LGVANKAQHE--------- 291
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
FS++ P G + +SLDFE+ ++Y + + A
Sbjct: 292 -FSLD-PVTGDIITLQSLDFEEVEQYTIDVEA 321
>gi|334331227|ref|XP_003341469.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 1-like [Monodelphis
domestica]
Length = 4550
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 18/86 (20%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
P GS + + ++A D D+G NG V Y + SQ +D F+I++
Sbjct: 2786 PGGSRVIQ-VKATDLDSGANGQVLYSLDQSQS----------------LDVIESFAIDM- 2827
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVAS 110
G +T + LD EK +Y +T+VAS
Sbjct: 2828 ETGWITTLKELDHEKRDKYHITVVAS 2853
>gi|194226506|ref|XP_001916261.1| PREDICTED: protocadherin Fat 1 [Equus caballus]
Length = 4588
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 42/86 (48%), Gaps = 18/86 (20%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
P GS + + +RA D D+G NG V Y + SQ V V++ F+IN+
Sbjct: 2823 PGGSRVIQ-IRASDLDSGTNGQVMYSLDQSQ-------------SVEVLES---FAINM- 2864
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVAS 110
G +T + LD EK Y + +VAS
Sbjct: 2865 ETGWITTLKELDHEKRDNYQIKVVAS 2890
>gi|432098834|gb|ELK28329.1| Protocadherin Fat 2 [Myotis davidii]
Length = 4335
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 43/98 (43%), Gaps = 23/98 (23%)
Query: 12 RTIPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVT 71
+ +P + D T G IF+ + A D D GVNG V Y
Sbjct: 2070 KHLPYYTIIQDGTEPGDVIFQ-VSASDQDLGVNGAVTY---------------------A 2107
Query: 72 VVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
+ Y+YF I+ P+ G +++ + D++ +Y + ++A
Sbjct: 2108 FSEEYTYFRID-PYLGDISLKKPFDYQALNKYHLKVIA 2144
>gi|402872875|ref|XP_003919499.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin beta-8 [Papio anubis]
Length = 715
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 19/91 (20%)
Query: 19 RVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSY 78
++S+ +P+G + K + A D D GVNG + Y + + D+ + VD +
Sbjct: 165 QISEDSPIGFLVVK-VSATDVDTGVNGEISYSLFQASDE---------ISKTFKVDSLT- 213
Query: 79 FSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
G++ + + LDFEK Q Y V I A
Sbjct: 214 --------GEIELKKQLDFEKLQSYEVNIEA 236
>gi|355691768|gb|EHH26953.1| hypothetical protein EGK_17044 [Macaca mulatta]
Length = 4349
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 42/98 (42%), Gaps = 23/98 (23%)
Query: 12 RTIPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVT 71
+ +P + D T G +F+ + A D D G NG V Y
Sbjct: 2071 KHLPYYTIIQDGTEPGDVLFQ-VSATDEDLGTNGAVTY---------------------E 2108
Query: 72 VVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
+ Y+YF I+ P+ G +T+ + D++ +Y + ++A
Sbjct: 2109 FAEDYTYFRID-PYLGDITLKKPFDYQALNKYRLKVIA 2145
>gi|149017343|gb|EDL76394.1| rCG49295, isoform CRA_ad [Rattus norvegicus]
Length = 869
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 19/92 (20%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
VRV + P G+T+ + LRA D D G+N Y +G A+ +
Sbjct: 249 VRVREDLPPGTTVLR-LRATDQDEGINAEFTYSF-------LGVANKAQHE--------- 291
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
FS++ P G + +SLDFE+ ++Y + + A
Sbjct: 292 -FSLD-PVTGDIITLQSLDFEEVEQYTIDVEA 321
>gi|109079410|ref|XP_001110265.1| PREDICTED: protocadherin Fat 2-like [Macaca mulatta]
Length = 4349
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 42/98 (42%), Gaps = 23/98 (23%)
Query: 12 RTIPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVT 71
+ +P + D T G +F+ + A D D G NG V Y
Sbjct: 2071 KHLPYYTIIQDGTEPGDVLFQ-VSATDEDLGTNGAVTY---------------------E 2108
Query: 72 VVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
+ Y+YF I+ P+ G +T+ + D++ +Y + ++A
Sbjct: 2109 FAEDYTYFRID-PYLGDITLKKPFDYQALNKYRLKVIA 2145
>gi|118084781|ref|XP_001231264.1| PREDICTED: protocadherin-9 isoform 1 [Gallus gallus]
Length = 1237
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 18/95 (18%)
Query: 16 VIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V V + + PVG+++ + L A DAD G N + Y G R
Sbjct: 257 VEVHIPENAPVGTSVIQ-LHATDADIGSNAEIRYIF--------GAQVAPATKR------ 301
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+F++N G +TV RSLD E+T + VT++AS
Sbjct: 302 --FFALNN-TTGLITVQRSLDREETAIHKVTVLAS 333
>gi|119572446|gb|EAW52061.1| protocadherin 17, isoform CRA_c [Homo sapiens]
Length = 889
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 15/74 (20%)
Query: 36 AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSL 95
A D D G NG V Y I+PS IG V Y+Y S+N P G + RS
Sbjct: 496 AQDPDLGQNGTVSYSILPSH---IGD-----------VSIYTYVSVN-PTNGAIYALRSF 540
Query: 96 DFEKTQRYLVTIVA 109
+FE+T+ + ++A
Sbjct: 541 NFEQTKAFEFKVLA 554
>gi|432961282|ref|XP_004086589.1| PREDICTED: protocadherin Fat 4-like [Oryzias latipes]
Length = 4971
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 23/90 (25%)
Query: 20 VSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYF 79
V++ PVG T+ + + D DAG N + Y ++ D F
Sbjct: 2758 VAENAPVGYTVTR-VTTTDEDAGSNAISRY---------------------SLTDSGLPF 2795
Query: 80 SINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
SIN P+ G +T+NR L+ E+T Y+V + A
Sbjct: 2796 SIN-PNTGDITINRPLNREETDHYIVKVSA 2824
>gi|355677298|gb|AER95951.1| cadherin 6, type 2, K-cadherin [Mustela putorius furo]
Length = 512
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 17/92 (18%)
Query: 19 RVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSY 78
+ + +P G+ I + ++A DAD G N +EY I +G G D VV
Sbjct: 88 KTPESSPPGTPIGR-IKASDADMGENAEIEYSIT----------EGEGLDMFDVVTDQET 136
Query: 79 FSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+G +TV + LDFEK + Y + + AS
Sbjct: 137 ------QEGVITVKKLLDFEKKKVYTLKVEAS 162
>gi|262263237|tpg|DAA06614.1| TPA_inf: protocadherin gamma b12 isoform [Anolis carolinensis]
Length = 939
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 23/94 (24%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFI--VPSQDKNIGTADGVGKDRVTVVDG 75
V + + TP S + + ++A D DAG NG V Y +P + + + D KD
Sbjct: 250 VNLKENTPRRSLVVQ-VKATDKDAGSNGQVTYNFRNIPERARQKFSLDS--KD------- 299
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
G++T+ +LDFE+++RYLV + A
Sbjct: 300 -----------GKITIKEALDFEESERYLVAVEA 322
>gi|119572444|gb|EAW52059.1| protocadherin 17, isoform CRA_a [Homo sapiens]
Length = 899
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 15/74 (20%)
Query: 36 AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSL 95
A D D G NG V Y I+PS IG V Y+Y S+N P G + RS
Sbjct: 496 AQDPDLGQNGTVSYSILPSH---IGD-----------VSIYTYVSVN-PTNGAIYALRSF 540
Query: 96 DFEKTQRYLVTIVA 109
+FE+T+ + ++A
Sbjct: 541 NFEQTKAFEFKVLA 554
>gi|355750344|gb|EHH54682.1| hypothetical protein EGM_15570 [Macaca fascicularis]
Length = 4349
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 42/98 (42%), Gaps = 23/98 (23%)
Query: 12 RTIPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVT 71
+ +P + D T G +F+ + A D D G NG V Y
Sbjct: 2071 KHLPYYTIIQDGTEPGDVLFQ-VSATDEDLGTNGAVTY---------------------E 2108
Query: 72 VVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
+ Y+YF I+ P+ G +T+ + D++ +Y + ++A
Sbjct: 2109 FAEDYTYFRID-PYLGDITLKKPFDYQALNKYRLKVIA 2145
>gi|348514391|ref|XP_003444724.1| PREDICTED: protocadherin gamma-A11-like [Oreochromis niloticus]
Length = 684
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 55/115 (47%), Gaps = 22/115 (19%)
Query: 1 LTCTVKVSNRKRTIPVIVR------VSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPS 54
+T T+++S+ PV + V++ G ++ ++A D D G N + YF+ S
Sbjct: 426 VTLTLQISDVNDNAPVFEQQFLTAFVNENNSPGMSLL-TVKASDMDYGSNARISYFLEDS 484
Query: 55 QDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
Q + + +YFS+N+ +G++ RS D+E+T+ + + + A
Sbjct: 485 QLNGMSAS--------------AYFSVNV-ERGEIVAVRSFDYEQTKEFHIRVKA 524
>gi|330367381|dbj|BAK19471.1| cadherin-7 [Streptopelia risoria]
Length = 189
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 23/94 (24%)
Query: 20 VSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYF 79
V + PV S + + ++A DAD G N +EY IV DG DG F
Sbjct: 3 VPESLPVASVVAR-IKAADADVGPNAEMEYKIV----------DG---------DGLGVF 42
Query: 80 SINL---PHQGQVTVNRSLDFEKTQRYLVTIVAS 110
I++ +G +T+ + LDFE Y + I A+
Sbjct: 43 KISVDKDTQEGIITIQKELDFEAKTSYTLRIEAA 76
>gi|148703183|gb|EDL35130.1| mCG142341 [Mus musculus]
Length = 2317
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 26/98 (26%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIV-PSQDK-NIGTADGVGKDRVTV 72
P + + + TP+ + +FK +A D D+G N +EY ++ PS +K +IGT D
Sbjct: 5 PKLTYIPENTPIDTVVFK-AQATDPDSGPNSYIEYTLLNPSGNKFSIGTID--------- 54
Query: 73 VDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
G+V + LD E+ Y +T+VA+
Sbjct: 55 --------------GEVHLTGELDREEVSNYSLTVVAT 78
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 40/90 (44%), Gaps = 22/90 (24%)
Query: 20 VSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYF 79
V + P G+T+ +L A DAD+G N ++ Y V S D ++ D
Sbjct: 1108 VMENAPSGTTVI-HLNATDADSGANAVIAY-TVQSSDSDLFVID---------------- 1149
Query: 80 SINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
P+ G +T LDFE Q Y +T+ A
Sbjct: 1150 ----PNMGVITTQGFLDFETKQSYHLTVKA 1175
>gi|94369682|ref|XP_143371.6| PREDICTED: similar to cadherin protein [Mus musculus]
Length = 2842
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVG 66
+R+S TP G+ ++ RA D D+G+NGLV Y I Q G G
Sbjct: 423 IRISQTTPPGTALYL-ARAQDRDSGLNGLVRYSIASPQPSEFSMDQGRG 470
>gi|449475304|ref|XP_004175476.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin beta-14-like
[Taeniopygia guttata]
Length = 737
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 19/94 (20%)
Query: 17 IVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGY 76
I R+ + P GS + L A D DAGVNG + Y + +G +D
Sbjct: 242 IGRIMENMPEGSVVLTVL-ATDQDAGVNGDISYQL----SLEVGQSD------------- 283
Query: 77 SYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
S F I+ P G++ + + LDFE +R+ +++ A+
Sbjct: 284 SAFVID-PITGEIKLRKPLDFEAAERHEMSVRAT 316
>gi|440911891|gb|ELR61516.1| Cadherin-23, partial [Bos grunniens mutus]
Length = 3319
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 48/102 (47%), Gaps = 30/102 (29%)
Query: 15 PVIVRVSDL-----TPVGSTIFKNLRAVDADAGVNGLVEY-FIVPSQDKNIGTADGVGKD 68
P VR+ ++ TPVG+ IF + A D D G G V Y F PSQ
Sbjct: 88 PYSVRIPEVEQRGNTPVGTPIFI-VNATDPDLGAGGSVLYSFQPPSQ------------- 133
Query: 69 RVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+F+++ +G VTV R LD+E TQ Y +T+ A+
Sbjct: 134 ---------FFAVD-SARGIVTVIRELDYETTQAYQLTVNAT 165
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 40/85 (47%), Gaps = 23/85 (27%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
PVG+ I + A DAD+G L+EY ++VDG F+I+ P
Sbjct: 2381 PVGTVILT-VTATDADSGNFALIEY---------------------SLVDGEGKFAIS-P 2417
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVA 109
G + V SLD EK Y++T +A
Sbjct: 2418 TTGDIYVLSSLDREKKDHYILTALA 2442
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 21/94 (22%)
Query: 14 IPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVV 73
+P+ V +S+ +P+ S + + L A DAD+G N L+ + I ++R
Sbjct: 1818 LPMNVTISENSPISSFVARIL-ASDADSGCNALLTFNITAGN-----------RERA--- 1862
Query: 74 DGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTI 107
FSIN G +TVNR LD E+ Y +TI
Sbjct: 1863 -----FSINA-TTGIITVNRPLDRERIPEYRLTI 1890
Score = 34.3 bits (77), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Query: 12 RTIPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFI---VPSQDKNIGTADGV 65
+ +P + V + TP G ++++ + A+D D G+NGLV Y + +P D I ++ GV
Sbjct: 846 QNLPFVAEVLEGTPAGVSVYQ-VVAIDLDEGLNGLVSYRMQVGMPRMDFVINSSSGV 901
>gi|431892557|gb|ELK02990.1| Protocadherin beta-14 [Pteropus alecto]
Length = 798
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 38/87 (43%), Gaps = 19/87 (21%)
Query: 24 TPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINL 83
TP+GS I + A D DAG G + Y + + D F IN
Sbjct: 255 TPIGSWII-TITAKDLDAGYYGKISYMFFHASE-----------------DIRKTFEIN- 295
Query: 84 PHQGQVTVNRSLDFEKTQRYLVTIVAS 110
P G+V + SLDFE Q Y++ I A+
Sbjct: 296 PTSGEVHLRSSLDFEVIQSYIINIQAT 322
>gi|410949738|ref|XP_003981575.1| PREDICTED: LOW QUALITY PROTEIN: cadherin-6 [Felis catus]
Length = 791
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 17/92 (18%)
Query: 19 RVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSY 78
+ + +P G+ I + ++A DAD G N +EY I +G G D VV
Sbjct: 277 KTPESSPPGTPIGR-IKASDADMGENAEIEYSIT----------EGEGLDMFDVV----- 320
Query: 79 FSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ +G +TV + LDFEK + Y + + AS
Sbjct: 321 -TDQETQEGVITVKKVLDFEKKKVYTLKVEAS 351
>gi|327269958|ref|XP_003219759.1| PREDICTED: cadherin-7-like [Anolis carolinensis]
Length = 785
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 17/91 (18%)
Query: 20 VSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYF 79
V + PV S + + L+A DAD G N +EY IV DG+G +V +VD +
Sbjct: 271 VPESLPVASVVAR-LKAADADMGPNAEMEYKIV--------DGDGLGVFKV-LVDKET-- 318
Query: 80 SINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+G +T+ + LD+E Y + I A+
Sbjct: 319 -----QEGIITIQKELDYEAKASYTLRIEAA 344
>gi|326914028|ref|XP_003203331.1| PREDICTED: protocadherin-9-like [Meleagris gallopavo]
Length = 1032
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 18/95 (18%)
Query: 16 VIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V V + + PVG+++ + L A DAD G N + Y G R
Sbjct: 257 VEVHIPENAPVGTSVIQ-LHATDADIGSNAEIRYIF--------GAQVAPATKR------ 301
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+F++N G +TV RSLD E+T + VT++AS
Sbjct: 302 --FFALNN-TTGLITVQRSLDREETAIHKVTVLAS 333
>gi|402873140|ref|XP_003900444.1| PREDICTED: protocadherin Fat 2 [Papio anubis]
Length = 4349
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 42/98 (42%), Gaps = 23/98 (23%)
Query: 12 RTIPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVT 71
+ +P + D T G +F+ + A D D G NG V Y
Sbjct: 2071 KHLPYYTIIQDGTEPGDVLFQ-VSATDEDLGTNGAVTY---------------------E 2108
Query: 72 VVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
+ Y+YF I+ P+ G +T+ + D++ +Y + ++A
Sbjct: 2109 FAEDYTYFRID-PYLGDITLKKPFDYQALNKYRLKVIA 2145
>gi|348555728|ref|XP_003463675.1| PREDICTED: LOW QUALITY PROTEIN: cadherin-10-like [Cavia porcellus]
Length = 708
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 17/95 (17%)
Query: 16 VIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
+ +RV + +PVG+ + +++A DAD G N VEY I+ DG G + ++
Sbjct: 274 IHLRVLESSPVGTAV-GSVKATDADTGKNAEVEYRII----------DGDGTEMFDII-- 320
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ +G +TV + LD+E + Y + + A
Sbjct: 321 ----TEKDTQEGIITVKKPLDYESRRLYTLKVEAE 351
>gi|297686510|ref|XP_002820787.1| PREDICTED: cadherin-related family member 1, partial [Pongo abelii]
Length = 743
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 25/97 (25%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P + V + P GS IFK + AVD D G G V YF+ +N+
Sbjct: 23 PYVALVPEDIPAGSIIFK-VHAVDRDTGSGGSVTYFL-----QNL--------------- 61
Query: 75 GYSYFSINLPHQG--QVTVNRSLDFEKTQRYLVTIVA 109
+S F+++ H G ++ +LD+E+++ + +T+VA
Sbjct: 62 -HSPFAVDR-HSGVLRLQAGATLDYERSRTHYITVVA 96
>gi|126320872|ref|XP_001364635.1| PREDICTED: cadherin-12 [Monodelphis domestica]
Length = 794
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 44/93 (47%), Gaps = 17/93 (18%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
++V + + VGS I + +RAVD D G N +EY IVP N+ D VT D
Sbjct: 276 LKVPESSLVGSAIGR-IRAVDPDFGKNAEIEYNIVPGDGGNLF-------DIVTDEDT-- 325
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+G + + + LDFE + Y + AS
Sbjct: 326 -------QEGVIKLKKPLDFETKKAYTFKVEAS 351
>gi|167736396|ref|NP_001108074.1| protocadherin beta-4 [Rattus norvegicus]
gi|149017292|gb|EDL76343.1| rCG49299 [Rattus norvegicus]
Length = 797
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 44/96 (45%), Gaps = 19/96 (19%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P V+V + P S I L A DADAG G V Y + + D+ T
Sbjct: 245 PYEVQVPESCPPDSPILTVL-APDADAGNFGSVSYGLFQASDEIQKT------------- 290
Query: 75 GYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
FSIN G++ + + LDFEKT+ Y V I A+
Sbjct: 291 ----FSIN-EVTGEIRLKKELDFEKTESYRVEIEAT 321
>gi|345320270|ref|XP_001519499.2| PREDICTED: protocadherin gamma-C4 [Ornithorhynchus anatinus]
Length = 867
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 10/72 (13%)
Query: 30 IFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQV 89
+ +L A D D+G+NGL+ Y ++ + + + S+ S+N P G V
Sbjct: 470 LLCSLAASDPDSGLNGLIAYSLLEPRGR---------EAAAAAAAASSFLSLN-PQTGAV 519
Query: 90 TVNRSLDFEKTQ 101
RS D+E+TQ
Sbjct: 520 HAARSFDYEQTQ 531
>gi|224043469|ref|XP_002199274.1| PREDICTED: protocadherin-9 [Taeniopygia guttata]
Length = 1203
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 18/95 (18%)
Query: 16 VIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V V + + PVG+++ + L A DAD G N + Y G R
Sbjct: 257 VEVHIPENAPVGTSVIQ-LHATDADIGSNAEIRYIF--------GAQVAPATKR------ 301
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+F++N G +TV RSLD E+T + VT++AS
Sbjct: 302 --FFALNN-TTGLITVQRSLDREETAIHKVTVLAS 333
>gi|432106747|gb|ELK32399.1| Cadherin-23 [Myotis davidii]
Length = 1729
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 18/94 (19%)
Query: 17 IVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGY 76
IV + + P+ S +++ + A D D G+NG V Y + K G D +
Sbjct: 996 IVHIKEEVPLRSNVYE-VYATDQDEGLNGAVRYSFL----KTTGNRD------------W 1038
Query: 77 SYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
YF+I+ P G + + LD EK Y + +VAS
Sbjct: 1039 EYFTID-PISGLIQTAQRLDREKQAMYSLILVAS 1071
Score = 35.8 bits (81), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 40/85 (47%), Gaps = 23/85 (27%)
Query: 25 PVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLP 84
PVG+ I + A DAD+G ++EY ++VDG F+IN P
Sbjct: 837 PVGTVIL-TVTASDADSGNFAVIEY---------------------SLVDGEGKFAIN-P 873
Query: 85 HQGQVTVNRSLDFEKTQRYLVTIVA 109
G + V SLD EK Y++T +A
Sbjct: 874 TTGDIYVLSSLDREKKDHYILTALA 898
Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 21/94 (22%)
Query: 14 IPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVV 73
+P+ V +S+ +PV S+ ++ A DAD+G N L+ + +T
Sbjct: 275 LPMNVTISENSPV-SSFVAHILASDADSGCNALLTF-------------------NITAG 314
Query: 74 DGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTI 107
+ F+IN G VTVNR LD E+ Y +TI
Sbjct: 315 NRERAFAINA-TSGIVTVNRPLDRERIPEYKLTI 347
>gi|73949439|ref|XP_849512.1| PREDICTED: protocadherin gamma-B6 [Canis lupus familiaris]
Length = 819
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 41/92 (44%), Gaps = 19/92 (20%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
+ VS+ P GS++ + + A D D G+N V Y+ R T
Sbjct: 249 ISVSENLPPGSSVLQ-VTATDKDEGINAEVNYYF-----------------RSTAQSTRH 290
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
FS++ G + N+ LDFE T+RY + + A
Sbjct: 291 MFSLD-EKTGTIKNNQPLDFEDTERYTMEVEA 321
>gi|395830699|ref|XP_003788456.1| PREDICTED: cadherin-7 [Otolemur garnettii]
Length = 869
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 17/91 (18%)
Query: 20 VSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYF 79
V + PV S + + ++A DAD G N +EY IV DG+G +++V
Sbjct: 355 VPESLPVASVVAR-IKAADADIGANAEMEYKIV--------DGDGLGIFKISVDKDT--- 402
Query: 80 SINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+G +T+ + LDFE Y + I A+
Sbjct: 403 -----QEGIITIQKELDFEAKTSYTLRIEAA 428
>gi|328721195|ref|XP_001944272.2| PREDICTED: cadherin-related tumor suppressor-like [Acyrthosiphon
pisum]
Length = 5057
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 20/77 (25%)
Query: 33 NLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVN 92
++ AVD D GVNG+V Y ++ ++ F+I+ PH G ++
Sbjct: 1852 DITAVDEDEGVNGVVTYSVISDWANDV-------------------FNID-PHTGAFSLT 1891
Query: 93 RSLDFEKTQRYLVTIVA 109
LD E+ Q Y++T+ A
Sbjct: 1892 GKLDHEEVQHYIMTVQA 1908
Score = 35.0 bits (79), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 41/92 (44%), Gaps = 23/92 (25%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYS 77
V V + P+GST+ ++A D D G NGLV Y +K
Sbjct: 3104 VFVPENEPIGSTVLT-VKATDQDEGPNGLVRYSFENLSEK-------------------- 3142
Query: 78 YFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
F +N G +T+ + LDFE+ + Y + ++A
Sbjct: 3143 -FKLN-SDTGAITIAQILDFERIREYKLNVIA 3172
>gi|256081070|ref|XP_002576797.1| cadherin [Schistosoma mansoni]
gi|353232368|emb|CCD79723.1| putative cadherin [Schistosoma mansoni]
Length = 1073
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 30/101 (29%), Positives = 44/101 (43%), Gaps = 26/101 (25%)
Query: 9 NRKRTIPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKD 68
NR +TI VS P G F + A+D DAG NG + YFI D
Sbjct: 896 NRTKTI-----VSYKEPSGYA-FTQVLAIDIDAGENGTILYFIHSGND------------ 937
Query: 69 RVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
+ YF +N P G +++N+ + + YL+T+ A
Sbjct: 938 -------HHYFKLN-PKNGILSINKKIPYTGIGEYLLTLEA 970
>gi|440892168|gb|ELR45483.1| Protocadherin-12 [Bos grunniens mutus]
Length = 1197
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 30/84 (35%), Positives = 38/84 (45%), Gaps = 23/84 (27%)
Query: 29 TIFKNLRAVDADAGVNGLVEYFI---VPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPH 85
T+ NL A D D G NG VEYF+ VP + N FSI+
Sbjct: 260 TLLINLTATDPDQGPNGEVEYFLSKHVPLEVLNT-------------------FSID-AK 299
Query: 86 QGQVTVNRSLDFEKTQRYLVTIVA 109
GQVT+ + LD+EK Y V + A
Sbjct: 300 TGQVTLLQHLDYEKNPAYEVDVQA 323
>gi|403304025|ref|XP_003942614.1| PREDICTED: cadherin-related family member 1 [Saimiri boliviensis
boliviensis]
Length = 1014
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 25/97 (25%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVD 74
P +V V + P GS+IFK + AVD D G G V YF+ +N+
Sbjct: 294 PYVVLVPEDIPAGSSIFK-VHAVDRDTGSGGSVTYFL-----QNL--------------- 332
Query: 75 GYSYFSINLPHQG--QVTVNRSLDFEKTQRYLVTIVA 109
+S F+++ H G ++ +LD+E+++ + + +VA
Sbjct: 333 -HSPFAVDR-HSGVLRLQPEATLDYERSRTHYIPVVA 367
>gi|363729170|ref|XP_003640607.1| PREDICTED: protocadherin-9 [Gallus gallus]
Length = 1018
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 18/95 (18%)
Query: 16 VIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V V + + PVG+++ + L A DAD G N + Y G R
Sbjct: 257 VEVHIPENAPVGTSVIQ-LHATDADIGSNAEIRYIF--------GAQVAPATKR------ 301
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+F++N G +TV RSLD E+T + VT++AS
Sbjct: 302 --FFALNN-TTGLITVQRSLDREETAIHKVTVLAS 333
>gi|119583578|gb|EAW63174.1| cadherin 7, type 2, isoform CRA_b [Homo sapiens]
Length = 630
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 17/91 (18%)
Query: 20 VSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYF 79
V + PV S + + ++A DAD G N +EY IV DG+G +++ VD +
Sbjct: 271 VPESLPVASVVAR-IKAADADIGANAEMEYKIV--------DGDGLGIFKIS-VDKET-- 318
Query: 80 SINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+G +T+ + LDFE Y + I A+
Sbjct: 319 -----QEGIITIQKELDFEAKTSYTLRIEAA 344
>gi|23331158|gb|AAH36786.1| CDH7 protein [Homo sapiens]
Length = 630
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 17/91 (18%)
Query: 20 VSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYF 79
V + PV S + + ++A DAD G N +EY IV DG+G +++ VD +
Sbjct: 271 VPESLPVASVVAR-IKAADADIGANAEMEYKIV--------DGDGLGIFKIS-VDKET-- 318
Query: 80 SINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+G +T+ + LDFE Y + I A+
Sbjct: 319 -----QEGIITIQKELDFEAKTSYTLRIEAA 344
>gi|410901222|ref|XP_003964095.1| PREDICTED: cadherin-related family member 1-like [Takifugu
rubripes]
Length = 871
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 49/99 (49%), Gaps = 19/99 (19%)
Query: 12 RTIPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVT 71
+ +P I V + T GS+I++ ++AVD D G G V Y++ + N +
Sbjct: 138 QNMPAIADVMETTESGSSIYR-VQAVDKDTGSGGSVTYYLQVQEYHNPQS---------- 186
Query: 72 VVDGYSYFSINLPHQG--QVTVNRSLDFEKTQRYLVTIV 108
+ F+I+ H G ++ LD+EKT+ + VT++
Sbjct: 187 -----TLFTIDR-HSGVVRIKAGEMLDYEKTKAHFVTVI 219
>gi|402903308|ref|XP_003914513.1| PREDICTED: cadherin-7 [Papio anubis]
Length = 809
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 17/91 (18%)
Query: 20 VSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYF 79
V + PV S + + ++A DAD G N +EY IV DG+G +++V
Sbjct: 271 VPESLPVASVVAR-IKAADADIGANAEMEYRIV--------DGDGLGIFKISV------- 314
Query: 80 SINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+G +T+ + LDFE Y + I A+
Sbjct: 315 -DKETQEGIITIQKELDFEAKTSYTLRIEAA 344
>gi|268574264|ref|XP_002642109.1| C. briggsae CBR-CDH-4 protein [Caenorhabditis briggsae]
Length = 4339
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 10/91 (10%)
Query: 19 RVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSY 78
+V + + VG + ++AVDAD+ G V Y + AD D +
Sbjct: 3227 KVKENSKVGEKVL-TVKAVDADSEHFGAVSYELE-------LIADKASDDSLPTTSVTPP 3278
Query: 79 FSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
FSIN G V +N+ +D+EKT++Y + ++A
Sbjct: 3279 FSINA--NGDVLINQPIDYEKTKKYNLKLIA 3307
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 13 TIPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFI 51
+ P +V V++ P+G+ + K L++ D DAG NGL+ Y I
Sbjct: 605 SFPEVVEVTEDAPIGTVVAK-LQSSDEDAGYNGLIRYVI 642
>gi|405953857|gb|EKC21435.1| Protocadherin Fat 4 [Crassostrea gigas]
Length = 2261
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 22 DLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDR 69
D TPVG+T++ + A D DAG N +EY IV + D +I A + R
Sbjct: 106 DSTPVGTTVYSGISATDLDAGQNKEIEYAIV-AGDGSIDKASNPAERR 152
>gi|397514081|ref|XP_003827329.1| PREDICTED: cadherin-7 isoform 2 [Pan paniscus]
Length = 869
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 17/91 (18%)
Query: 20 VSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYF 79
V + PV S + + ++A DAD G N +EY IV DG+G +++ VD +
Sbjct: 355 VPESLPVASVVAR-IKAADADIGANAEMEYKIV--------DGDGLGIFKIS-VDKET-- 402
Query: 80 SINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+G +T+ + LDFE Y + I A+
Sbjct: 403 -----QEGIITIQKELDFEAKTSYTLRIEAA 428
>gi|354477312|ref|XP_003500865.1| PREDICTED: cadherin-10 [Cricetulus griseus]
Length = 788
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 17/95 (17%)
Query: 16 VIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
+ +RV + +PVG+ + +++A DAD G N V+Y I+ DG G D ++
Sbjct: 274 IHLRVLESSPVGTAV-GSVKATDADMGKNAEVDYRII----------DGDGTDMFDII-- 320
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ +G +TV + LD+E + Y + + A
Sbjct: 321 ----TEKDTQEGIITVKKPLDYESRRLYTLKVEAE 351
>gi|292620545|ref|XP_001922093.2| PREDICTED: protocadherin beta-16-like [Danio rerio]
Length = 800
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 37/82 (45%), Gaps = 18/82 (21%)
Query: 29 TIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQ 88
TI + A DAD G+N +EY I QD N+ + KD GQ
Sbjct: 249 TIVSTVSATDADEGINSKIEYSIANRQD-NVRQLFDINKD-----------------NGQ 290
Query: 89 VTVNRSLDFEKTQRYLVTIVAS 110
V V +DFEK + Y +++ AS
Sbjct: 291 VRVVGIIDFEKARNYEISVQAS 312
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.136 0.382
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,598,479,714
Number of Sequences: 23463169
Number of extensions: 61418364
Number of successful extensions: 140321
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 1734
Number of HSP's that attempted gapping in prelim test: 133151
Number of HSP's gapped (non-prelim): 9336
length of query: 110
length of database: 8,064,228,071
effective HSP length: 78
effective length of query: 32
effective length of database: 6,234,100,889
effective search space: 199491228448
effective search space used: 199491228448
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 69 (31.2 bits)