Your job contains 1 sequence.
>psy9047
LTCTVKVSNRKRTIPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIG
TADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS
The BLAST search returned 5 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy9047
(110 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0039709 - symbol:Cad99C "Cadherin 99C" species:722... 264 3.2e-21 1
UNIPROTKB|E1B949 - symbol:FAT4 "Uncharacterized protein" ... 89 5.3e-06 2
UNIPROTKB|F1NXZ3 - symbol:FAT3 "Uncharacterized protein" ... 89 7.0e-06 2
UNIPROTKB|F1NXZ5 - symbol:FAT3 "Uncharacterized protein" ... 89 8.9e-06 2
RGD|1564291 - symbol:Fat4 "FAT tumor suppressor homolog 4... 80 1.1e-05 2
UNIPROTKB|Q6V0I7 - symbol:FAT4 "Protocadherin Fat 4" spec... 85 1.3e-05 2
UNIPROTKB|E2RR85 - symbol:FAT4 "Uncharacterized protein" ... 84 2.2e-05 2
UNIPROTKB|F1LY95 - symbol:F1LY95 "Uncharacterized protein... 85 3.8e-05 2
UNIPROTKB|Q9Y5G3 - symbol:PCDHGB1 "Protocadherin gamma-B1... 82 6.0e-05 2
WB|WBGene00000396 - symbol:cdh-4 species:6239 "Caenorhabd... 79 7.8e-05 2
UNIPROTKB|E2R8V4 - symbol:PCDHGB1 "Uncharacterized protei... 83 0.00011 2
UNIPROTKB|F1SUA7 - symbol:CDH23 "Uncharacterized protein"... 85 0.00026 2
MGI|MGI:1890219 - symbol:Cdh23 "cadherin 23 (otocadherin)... 86 0.00026 2
UNIPROTKB|F1NHQ5 - symbol:LOC427547 "Uncharacterized prot... 85 0.00037 2
UNIPROTKB|F1NHQ1 - symbol:LOC427547 "Uncharacterized prot... 85 0.00037 2
UNIPROTKB|F1NJK1 - symbol:LOC427547 "Uncharacterized prot... 85 0.00039 2
UNIPROTKB|F1MXP9 - symbol:CDH23 "Uncharacterized protein"... 84 0.00042 2
UNIPROTKB|F1P8X5 - symbol:CDH23 "Uncharacterized protein"... 83 0.00042 2
UNIPROTKB|F1LPE5 - symbol:Cdh23 "Cadherin-23" species:101... 83 0.00051 2
UNIPROTKB|F1M2P9 - symbol:Cdh23 "Cadherin-23" species:101... 83 0.00052 2
RGD|619760 - symbol:Cdh23 "cadherin-related 23" species:1... 83 0.00052 2
UNIPROTKB|P58365 - symbol:Cdh23 "Cadherin-23" species:101... 83 0.00052 2
WB|WBGene00000395 - symbol:cdh-3 species:6239 "Caenorhabd... 79 0.00079 2
UNIPROTKB|E7EM97 - symbol:PCDH15 "Protocadherin-15" speci... 92 0.00080 1
>FB|FBgn0039709 [details] [associations]
symbol:Cad99C "Cadherin 99C" species:7227 "Drosophila
melanogaster" [GO:0016339 "calcium-dependent cell-cell adhesion"
evidence=ISS] [GO:0005887 "integral to plasma membrane"
evidence=ISS] [GO:0007156 "homophilic cell adhesion" evidence=IEA]
[GO:0048100 "wing disc anterior/posterior pattern formation"
evidence=IMP] [GO:0016021 "integral to membrane" evidence=ISS]
[GO:0005509 "calcium ion binding" evidence=ISS] [GO:0007155 "cell
adhesion" evidence=ISS] [GO:0007224 "smoothened signaling pathway"
evidence=IMP] [GO:0007304 "chorion-containing eggshell formation"
evidence=IMP] [GO:0005902 "microvillus" evidence=IDA] [GO:0032529
"follicle cell microvillus organization" evidence=IMP] [GO:0032533
"regulation of follicle cell microvillus length" evidence=IMP]
[GO:0016324 "apical plasma membrane" evidence=IDA] [GO:0007305
"vitelline membrane formation involved in chorion-containing
eggshell formation" evidence=IMP] InterPro:IPR002126
InterPro:IPR003961 InterPro:IPR015919 InterPro:IPR020894
Pfam:PF00028 PRINTS:PR00205 PROSITE:PS00232 PROSITE:PS50268
PROSITE:PS50853 SMART:SM00112 GO:GO:0005887 GO:GO:0016324
GO:GO:0005509 GO:GO:0016339 GO:GO:0007156 GO:GO:0005902
GO:GO:0007224 SUPFAM:SSF49313 Gene3D:2.60.40.60 GO:GO:0007305
FlyBase:FBgn0039709 GO:GO:0032529 GO:GO:0032533 EMBL:AY853686
EMBL:AY853687 STRING:Q5D716 InParanoid:Q5D716 Uniprot:Q5D716
Length = 1706
Score = 264 (98.0 bits), Expect = 3.2e-21, P = 3.2e-21
Identities = 61/129 (47%), Positives = 83/129 (64%)
Query: 1 LTCTVKVSNRKRTIPVIVRVSDL-------------------TPVGSTIFKNLRAVDADA 41
++CT + + +KRTIP+IVRVSD+ TPVG+TIF+N++A+D DA
Sbjct: 113 VSCTTRSTGKKRTIPIIVRVSDINDNAPRFMNTPYEVTVPESTPVGTTIFRNIQALDKDA 172
Query: 42 GVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQ 101
GVNGLVEYFI G+ + ++ + DGY F+I+ PHQGQVTV ++LDFEK Q
Sbjct: 173 GVNGLVEYFIAE------GSPNSTNVEKYSA-DGYGTFAISFPHQGQVTVAKTLDFEKIQ 225
Query: 102 RYLVTIVAS 110
Y +TIVAS
Sbjct: 226 TYYLTIVAS 234
>UNIPROTKB|E1B949 [details] [associations]
symbol:FAT4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005509 "calcium
ion binding" evidence=IEA] [GO:0007156 "homophilic cell adhesion"
evidence=IEA] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR002126 InterPro:IPR015919 InterPro:IPR018097
InterPro:IPR020894 Pfam:PF00028 Pfam:PF07645 PRINTS:PR00205
PROSITE:PS00232 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS50268
SMART:SM00112 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0016021 GO:GO:0005886 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186
InterPro:IPR001791 SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025
GO:GO:0007156 SUPFAM:SSF49313 Gene3D:2.60.40.60
GeneTree:ENSGT00700000104207 Pfam:PF02210 OMA:GKMCESS
EMBL:DAAA02044707 EMBL:DAAA02044708 EMBL:DAAA02044709
IPI:IPI00704274 Ensembl:ENSBTAT00000013316 Uniprot:E1B949
Length = 4983
Score = 89 (36.4 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIV-PSQDK-NIGTADG 64
P + + + TP+ + +FK +A D D+G N +EY ++ PS +K IGT DG
Sbjct: 2054 PKLTYIPENTPIDTIVFK-AQATDPDSGPNSYIEYTLLNPSGNKFTIGTIDG 2104
Score = 68 (29.0 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 13/23 (56%), Positives = 19/23 (82%)
Query: 87 GQVTVNRSLDFEKTQRYLVTIVA 109
GQV++++ LDFEK Q+Y+V I A
Sbjct: 2619 GQVSISQPLDFEKIQKYVVWIEA 2641
Score = 63 (27.2 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 15/31 (48%), Positives = 19/31 (61%)
Query: 79 FSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
FSIN P GQ+TV LD E Y +T++A
Sbjct: 3453 FSIN-PQTGQITVTAELDRETLPIYNLTVLA 3482
Score = 54 (24.1 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 12/26 (46%), Positives = 15/26 (57%)
Query: 84 PHQGQVTVNRSLDFEKTQRYLVTIVA 109
P+ G VT LDFE Q Y +T+ A
Sbjct: 3245 PNTGVVTTQGFLDFETKQSYHLTVKA 3270
Score = 50 (22.7 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 11/32 (34%), Positives = 22/32 (68%)
Query: 79 FSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F+IN G +T+ ++LD+E Q++ +T+ A+
Sbjct: 3137 FAIN-SSTGVLTLAKALDYELCQKHEMTVSAT 3167
Score = 47 (21.6 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 9/24 (37%), Positives = 15/24 (62%)
Query: 87 GQVTVNRSLDFEKTQRYLVTIVAS 110
G+V + LD E+ Y +T+VA+
Sbjct: 2104 GEVRLTGELDREEVSNYTLTVVAT 2127
>UNIPROTKB|F1NXZ3 [details] [associations]
symbol:FAT3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0007156 "homophilic cell
adhesion" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR000742 InterPro:IPR002126
InterPro:IPR015919 InterPro:IPR020894 Pfam:PF00008 Pfam:PF00028
PRINTS:PR00205 PROSITE:PS00232 PROSITE:PS50026 PROSITE:PS50268
SMART:SM00112 SMART:SM00181 GO:GO:0016021 GO:GO:0005886
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025
GO:GO:0007156 SUPFAM:SSF49313 Gene3D:2.60.40.60
GeneTree:ENSGT00700000104156 Pfam:PF02210 EMBL:AADN02004863
EMBL:AADN02004864 EMBL:AADN02004865 EMBL:AADN02004866
EMBL:AADN02004867 EMBL:AADN02004868 EMBL:AADN02004869
EMBL:AADN02004870 EMBL:AADN02004871 IPI:IPI00595688
Ensembl:ENSGALT00000027850 Uniprot:F1NXZ3
Length = 4029
Score = 89 (36.4 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 20/40 (50%), Positives = 27/40 (67%)
Query: 12 RTIPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFI 51
+T P V VS+ PVG+TI + ++A DAD+G NG V Y I
Sbjct: 692 KTFPTDVMVSEDLPVGATILR-IKAYDADSGFNGKVVYTI 730
Score = 65 (27.9 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 15/38 (39%), Positives = 24/38 (63%)
Query: 73 VDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
VDG F+IN P+ G +T ++LD+E Y +T+ A+
Sbjct: 1675 VDGL--FTIN-PYSGVITSQKALDYEHASFYQLTVQAT 1709
Score = 54 (24.1 bits), Expect = 9.3e-05, Sum P(2) = 9.3e-05
Identities = 16/60 (26%), Positives = 31/60 (51%)
Query: 52 VPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTV-NRSLDFEKTQRYLVTIVAS 110
+ +QD + T + + R+T + ++F IN P G +T +R LD E+ + + + S
Sbjct: 1135 IQAQDPDSSTNEKLAY-RITSGNPQNFFVIN-PKTGLITTTSRKLDREQQAEHFLEVTVS 1192
Score = 48 (22.0 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 15/46 (32%), Positives = 24/46 (52%)
Query: 66 GKDRVTVVDGY--SYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
G+ ++V G + FS++ P G V V + LD E+ Y + I A
Sbjct: 3342 GQIHFSIVSGDQDNEFSVD-PGSGLVKVKKKLDRERISGYSLVIQA 3386
>UNIPROTKB|F1NXZ5 [details] [associations]
symbol:FAT3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0007156 "homophilic cell
adhesion" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR002126 InterPro:IPR015919 InterPro:IPR018097
InterPro:IPR020894 Pfam:PF00008 Pfam:PF00028 Pfam:PF07645
PRINTS:PR00205 PROSITE:PS00232 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS50268 SMART:SM00112 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 GO:GO:0016021 GO:GO:0005886 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 InterPro:IPR001791 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 GO:GO:0007156 SUPFAM:SSF49313 Gene3D:2.60.40.60
GeneTree:ENSGT00700000104156 Pfam:PF02210 KO:K16506 CTD:120114
OMA:DNGWMVT EMBL:AADN02004863 EMBL:AADN02004864 EMBL:AADN02004865
EMBL:AADN02004866 EMBL:AADN02004867 EMBL:AADN02004868
EMBL:AADN02004869 EMBL:AADN02004870 EMBL:AADN02004871
IPI:IPI00583549 RefSeq:NP_001104793.1 UniGene:Gga.49207
Ensembl:ENSGALT00000027846 GeneID:395167 KEGG:gga:395167
NextBio:20815258 Uniprot:F1NXZ5
Length = 4557
Score = 89 (36.4 bits), Expect = 8.9e-06, Sum P(2) = 8.9e-06
Identities = 20/40 (50%), Positives = 27/40 (67%)
Query: 12 RTIPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFI 51
+T P V VS+ PVG+TI + ++A DAD+G NG V Y I
Sbjct: 728 KTFPTDVMVSEDLPVGATILR-IKAYDADSGFNGKVVYTI 766
Score = 65 (27.9 bits), Expect = 8.9e-06, Sum P(2) = 8.9e-06
Identities = 15/38 (39%), Positives = 24/38 (63%)
Query: 73 VDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
VDG F+IN P+ G +T ++LD+E Y +T+ A+
Sbjct: 1711 VDGL--FTIN-PYSGVITSQKALDYEHASFYQLTVQAT 1745
Score = 54 (24.1 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 16/60 (26%), Positives = 31/60 (51%)
Query: 52 VPSQDKNIGTADGVGKDRVTVVDGYSYFSINLPHQGQVTV-NRSLDFEKTQRYLVTIVAS 110
+ +QD + T + + R+T + ++F IN P G +T +R LD E+ + + + S
Sbjct: 1171 IQAQDPDSSTNEKLAY-RITSGNPQNFFVIN-PKTGLITTTSRKLDREQQAEHFLEVTVS 1228
Score = 46 (21.3 bits), Expect = 0.00077, Sum P(2) = 0.00077
Identities = 9/31 (29%), Positives = 19/31 (61%)
Query: 79 FSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
F+IN G ++++ SLD+E + + + + A
Sbjct: 3285 FNIN-SKTGAISISESLDYESCKDFYLVVEA 3314
>RGD|1564291 [details] [associations]
symbol:Fat4 "FAT tumor suppressor homolog 4 (Drosophila)"
species:10116 "Rattus norvegicus" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007156 "homophilic cell adhesion" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR002126 InterPro:IPR015919
InterPro:IPR018097 InterPro:IPR020894 Pfam:PF00008 Pfam:PF00028
Pfam:PF07645 PRINTS:PR00205 PROSITE:PS00232 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS50268 SMART:SM00112 SMART:SM00179
SMART:SM00181 InterPro:IPR000152 RGD:1564291 GO:GO:0016021
GO:GO:0005886 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 GO:GO:0007156 SUPFAM:SSF49313
Gene3D:2.60.40.60 GeneTree:ENSGT00700000104207 Pfam:PF02210
CTD:79633 KO:K16669 OMA:GKMCESS OrthoDB:EOG4HDSSK IPI:IPI00561034
RefSeq:XP_001070073.3 UniGene:Rn.30629 ProteinModelPortal:D3ZEH1
PhosphoSite:D3ZEH1 PRIDE:D3ZEH1 Ensembl:ENSRNOT00000038703
GeneID:310341 KEGG:rno:310341 UCSC:RGD:1564291 Uniprot:D3ZEH1
Length = 4981
Score = 80 (33.2 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 21/51 (41%), Positives = 29/51 (56%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVGKD 68
V +S+ PV S FK ++A+D D+G NG + Y I D N G A G+ D
Sbjct: 1003 VTLSESEPVNSRFFK-VQALDKDSGANGEIAYAIT---DGNSGEAFGIFPD 1049
Score = 74 (31.1 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 79 FSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
F I+ P GQV++++ LDFEK Q+Y+V I A
Sbjct: 2614 FQID-PLTGQVSISQPLDFEKIQKYIVWIEA 2643
Score = 65 (27.9 bits), Expect = 8.9e-05, Sum P(2) = 8.9e-05
Identities = 14/36 (38%), Positives = 22/36 (61%)
Query: 74 DGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
DG F +N P G + R+LD+E+ Q Y++T+ A
Sbjct: 1884 DGDGVFFLN-PVTGVFNLTRALDYERQQYYILTVRA 1918
Score = 57 (25.1 bits), Expect = 0.00058, Sum P(2) = 0.00058
Identities = 16/49 (32%), Positives = 25/49 (51%)
Query: 64 GVGKD---RVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
GV D +T + + FSI+ P+ G + + + LDFE Y + I A
Sbjct: 1345 GVNADLHYTITGSNNHGTFSIS-PNTGSIFLAKKLDFETQSLYKLNITA 1392
>UNIPROTKB|Q6V0I7 [details] [associations]
symbol:FAT4 "Protocadherin Fat 4" species:9606 "Homo
sapiens" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007156 "homophilic
cell adhesion" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR002126
InterPro:IPR015919 InterPro:IPR018097 InterPro:IPR020894
Pfam:PF00028 Pfam:PF07645 PRINTS:PR00205 PROSITE:PS00232
PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS50268 SMART:SM00112
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0016021
GO:GO:0005886 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 eggNOG:NOG12793 InterPro:IPR001791
SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025 GO:GO:0007156
SUPFAM:SSF49313 Gene3D:2.60.40.60 HSSP:P97291 Pfam:PF02210
EMBL:AY356402 EMBL:AC079835 EMBL:AC092629 EMBL:AC098865
EMBL:AB075518 EMBL:AK026709 EMBL:AK291461 EMBL:AL713715
IPI:IPI00419327 IPI:IPI00852735 IPI:IPI00888207 RefSeq:NP_078858.4
UniGene:Hs.563205 ProteinModelPortal:Q6V0I7 SMR:Q6V0I7
IntAct:Q6V0I7 MINT:MINT-2876314 STRING:Q6V0I7 PhosphoSite:Q6V0I7
DMDM:172046149 PaxDb:Q6V0I7 PRIDE:Q6V0I7 Ensembl:ENST00000335110
Ensembl:ENST00000394329 GeneID:79633 KEGG:hsa:79633 UCSC:uc003ifi.1
UCSC:uc003ifj.4 CTD:79633 GeneCards:GC04P126237 H-InvDB:HIX0004488
HGNC:HGNC:23109 MIM:612411 neXtProt:NX_Q6V0I7 PharmGKB:PA134954366
HOGENOM:HOG000074162 HOVERGEN:HBG104800 InParanoid:Q6V0I7 KO:K16669
OMA:GKMCESS OrthoDB:EOG4HDSSK ChiTaRS:FAT4 GenomeRNAi:79633
NextBio:68741 ArrayExpress:Q6V0I7 Bgee:Q6V0I7 CleanEx:HS_FAT4
Genevestigator:Q6V0I7 Uniprot:Q6V0I7
Length = 4981
Score = 85 (35.0 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 19/52 (36%), Positives = 32/52 (61%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIV-PSQDK-NIGTADG 64
P + + + TP+ + +FK +A D D+G N +EY ++ P +K +IGT DG
Sbjct: 2054 PKLTYIPENTPIDTVVFK-AQATDPDSGPNSYIEYTLLNPLGNKFSIGTIDG 2104
Score = 68 (29.0 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 13/23 (56%), Positives = 19/23 (82%)
Query: 87 GQVTVNRSLDFEKTQRYLVTIVA 109
GQV++++ LDFEK Q+Y+V I A
Sbjct: 2619 GQVSISQPLDFEKIQKYVVWIEA 2641
Score = 59 (25.8 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 79 FSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
FSIN P GQ+TV LD E Y ++++A
Sbjct: 3453 FSIN-PQTGQITVTAELDRETLPIYNLSVLA 3482
Score = 53 (23.7 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 84 PHQGQVTVNRSLDFEKTQRYLVTIVA 109
P+ G +T LDFE Q Y +T+ A
Sbjct: 3245 PNTGVITTQGFLDFETKQSYHLTVKA 3270
>UNIPROTKB|E2RR85 [details] [associations]
symbol:FAT4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007156 "homophilic cell adhesion" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=IEA] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR002126 InterPro:IPR015919 InterPro:IPR018097
InterPro:IPR020894 Pfam:PF00028 Pfam:PF07645 PRINTS:PR00205
PROSITE:PS00232 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS50268
SMART:SM00112 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0016021 GO:GO:0005886 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186
InterPro:IPR001791 SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025
GO:GO:0007156 SUPFAM:SSF49313 Gene3D:2.60.40.60
GeneTree:ENSGT00700000104207 Pfam:PF02210 OMA:GKMCESS
EMBL:AAEX03011791 EMBL:AAEX03011792 EMBL:AAEX03011793
Ensembl:ENSCAFT00000006363 Uniprot:E2RR85
Length = 4982
Score = 84 (34.6 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 19/52 (36%), Positives = 32/52 (61%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIV-PSQDK-NIGTADG 64
P + + + TP+ + +FK +A D D+G N +EY ++ P +K +IGT DG
Sbjct: 2054 PKLTYIPENTPIDTIVFK-AQATDPDSGPNSYIEYTLLNPLGNKFSIGTIDG 2104
Score = 67 (28.6 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 12/23 (52%), Positives = 19/23 (82%)
Query: 87 GQVTVNRSLDFEKTQRYLVTIVA 109
GQV++++ LDFEK Q+Y++ I A
Sbjct: 2621 GQVSISQPLDFEKIQKYVIWIEA 2643
Score = 64 (27.6 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 14/41 (34%), Positives = 24/41 (58%)
Query: 69 RVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
R +++D F+IN P G + ++R L+ E T RY + + A
Sbjct: 2810 RYSIMDTSLPFTIN-PSTGDIVISRPLNREDTDRYRIRVSA 2849
Score = 63 (27.2 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 15/31 (48%), Positives = 19/31 (61%)
Query: 79 FSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
FSIN P GQ+TV LD E Y +T++A
Sbjct: 3455 FSIN-PQTGQITVTAELDRETLPIYNLTVLA 3484
Score = 53 (23.7 bits), Expect = 0.00058, Sum P(2) = 0.00058
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 84 PHQGQVTVNRSLDFEKTQRYLVTIVA 109
P+ G +T LDFE Q Y +T+ A
Sbjct: 3247 PNTGVITTQGFLDFETKQSYHLTVKA 3272
>UNIPROTKB|F1LY95 [details] [associations]
symbol:F1LY95 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007156 "homophilic
cell adhesion" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR002126 InterPro:IPR015919
InterPro:IPR020894 Pfam:PF00028 PRINTS:PR00205 PROSITE:PS00232
PROSITE:PS50268 SMART:SM00112 GO:GO:0016021 GO:GO:0005886
GO:GO:0005509 GO:GO:0007156 SUPFAM:SSF49313 Gene3D:2.60.40.60
OMA:DKDGHFE GeneTree:ENSGT00570000078935 IPI:IPI00368355
Ensembl:ENSRNOT00000032147 ArrayExpress:F1LY95 Uniprot:F1LY95
Length = 3251
Score = 85 (35.0 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 20/49 (40%), Positives = 27/49 (55%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQDKNIGTADGVG 66
+R+S T G+ ++ RAVD D+G+NGLV Y I SQ G G
Sbjct: 906 IRISLTTAPGTALYL-ARAVDRDSGLNGLVRYSIANSQPSEFSMDQGRG 953
Score = 60 (26.2 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 63 DGVGKDRVTVV--DGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
D GK +VV D +F I+ G + + + LD+E T YL+ +++
Sbjct: 1365 DHSGKSHFSVVAEDKDDHFEID-SLTGDLFLTKELDYEMTSHYLIRVIS 1412
Score = 55 (24.4 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 73 VDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
VD + F I+ P G + + R LD+E TQ Y + A
Sbjct: 1046 VDS-AVFRIH-PRTGWIYLRRQLDYESTQTYKFRVFA 1080
>UNIPROTKB|Q9Y5G3 [details] [associations]
symbol:PCDHGB1 "Protocadherin gamma-B1" species:9606 "Homo
sapiens" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0007156 "homophilic cell adhesion" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] InterPro:IPR002126 InterPro:IPR015919
InterPro:IPR020894 Pfam:PF00028 PRINTS:PR00205 PROSITE:PS00232
PROSITE:PS50268 SMART:SM00112 GO:GO:0016021 GO:GO:0005886
EMBL:CH471062 GO:GO:0005509 GO:GO:0007156 SUPFAM:SSF49313
Gene3D:2.60.40.60 InterPro:IPR013164 Pfam:PF08266
HOVERGEN:HBG054878 HOGENOM:HOG000220892 UniGene:Hs.368160
HPA:HPA008755 MIM:604968 EMBL:AF152330 EMBL:AF152517 EMBL:BC103926
EMBL:BC103927 IPI:IPI00028615 IPI:IPI00215841 RefSeq:NP_061745.1
RefSeq:NP_115266.1 ProteinModelPortal:Q9Y5G3 SMR:Q9Y5G3
PhosphoSite:Q9Y5G3 DMDM:37999833 PRIDE:Q9Y5G3
Ensembl:ENST00000523390 GeneID:56104 KEGG:hsa:56104 UCSC:uc003ljo.2
UCSC:uc011daq.2 CTD:56104 GeneCards:GC05P141211 HGNC:HGNC:8708
MIM:606299 neXtProt:NX_Q9Y5G3 PharmGKB:PA33056 KO:K16496
OMA:TSKNYYK GenomeRNAi:56104 NextBio:61535 ArrayExpress:Q9Y5G3
Bgee:Q9Y5G3 Genevestigator:Q9Y5G3 Uniprot:Q9Y5G3
Length = 927
Score = 82 (33.9 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 15/33 (45%), Positives = 25/33 (75%)
Query: 77 SYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
S F++N P+ G +T N +LDFE+T RY++++ A
Sbjct: 286 SLFNLN-PNTGDITTNGTLDFEETSRYVLSVEA 317
Score = 50 (22.7 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 15/56 (26%), Positives = 29/56 (51%)
Query: 5 VKVSNRKRTIPV----IVRVS--DLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPS 54
++V++ PV + RVS + P G+++ + + A D D G+N + Y + S
Sbjct: 227 IRVTDANDNAPVFSQEVYRVSLQENVPWGTSVLR-VMATDQDEGINAEITYAFLNS 281
Score = 40 (19.1 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 36 AVDADAGVNGLVEYFIVPSQDKNIGTAD 63
A DAD N L Y I P+Q ++ T +
Sbjct: 154 AQDADVEGNSLKLYTINPNQYFSLSTKE 181
>WB|WBGene00000396 [details] [associations]
symbol:cdh-4 species:6239 "Caenorhabditis elegans"
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0007156
"homophilic cell adhesion" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0007413 "axonal fasciculation"
evidence=IMP] [GO:0007163 "establishment or maintenance of cell
polarity" evidence=IMP] [GO:0007411 "axon guidance" evidence=IMP]
InterPro:IPR000742 InterPro:IPR002126 InterPro:IPR015919
InterPro:IPR020894 Pfam:PF00028 PRINTS:PR00205 PROSITE:PS00232
PROSITE:PS50026 PROSITE:PS50268 SMART:SM00112 SMART:SM00181
GO:GO:0016021 GO:GO:0005886 GO:GO:0007411 GO:GO:0007163
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 eggNOG:NOG12793 InterPro:IPR001791
SMART:SM00282 PROSITE:PS50025 GO:GO:0007413 GO:GO:0007156
SUPFAM:SSF49313 Gene3D:2.60.40.60 GeneTree:ENSGT00700000104156
Pfam:PF02210 EMBL:Z34802 EMBL:Z35599 EMBL:Z35662 PIR:T20721
RefSeq:NP_001254917.1 HSSP:P00740 ProteinModelPortal:Q19319
SMR:Q19319 STRING:Q19319 PaxDb:Q19319 EnsemblMetazoa:F25F2.2a
GeneID:175590 KEGG:cel:CELE_F25F2.2 UCSC:F25F2.2 CTD:175590
WormBase:F25F2.2a HOGENOM:HOG000021369 KO:K16506 OMA:PYEAFIV
ArrayExpress:Q19319 Uniprot:Q19319
Length = 4292
Score = 79 (32.9 bits), Expect = 7.8e-05, Sum P(2) = 7.8e-05
Identities = 21/67 (31%), Positives = 33/67 (49%)
Query: 13 TIPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFI--VPSQDKNIGTADGVGKDRV 70
+ P IV V++ P+G+ + K L+A D D G NG + Y I + + T D + +
Sbjct: 610 SFPEIVEVTEDAPIGTVVAK-LQANDEDTGYNGFIRYVIHDIAGSSHEVLTVDEQSGE-I 667
Query: 71 TVVDGYS 77
TV S
Sbjct: 668 TVASDLS 674
Score = 71 (30.1 bits), Expect = 7.8e-05, Sum P(2) = 7.8e-05
Identities = 13/27 (48%), Positives = 19/27 (70%)
Query: 84 PHQGQVTVNRSLDFEKTQRYLVTIVAS 110
P G VT+ LD+EKTQ+Y + +VA+
Sbjct: 2233 PETGDVTITGQLDYEKTQKYDLKLVAT 2259
>UNIPROTKB|E2R8V4 [details] [associations]
symbol:PCDHGB1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007156 "homophilic cell adhesion" evidence=IEA] [GO:0005509
"calcium ion binding" evidence=IEA] InterPro:IPR002126
InterPro:IPR015919 InterPro:IPR020894 Pfam:PF00028 PRINTS:PR00205
PROSITE:PS00232 PROSITE:PS50268 SMART:SM00112 GO:GO:0016021
GO:GO:0005886 GO:GO:0005509 GO:GO:0007156 SUPFAM:SSF49313
Gene3D:2.60.40.60 InterPro:IPR013164 Pfam:PF08266 OMA:TSKNYYK
GeneTree:ENSGT00700000104231 EMBL:AAEX03001396
Ensembl:ENSCAFT00000009858 Uniprot:E2R8V4
Length = 812
Score = 83 (34.3 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 15/31 (48%), Positives = 23/31 (74%)
Query: 79 FSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
F++N P+ G +T N +LDFEKT RY++ + A
Sbjct: 290 FNLN-PNTGDITTNGTLDFEKTSRYMLVVEA 319
Score = 45 (20.9 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 10/32 (31%), Positives = 18/32 (56%)
Query: 18 VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEY 49
V + + P G+++ + + A D D GVN + Y
Sbjct: 247 VSLQENVPWGTSLLQ-VMATDQDEGVNAEITY 277
Score = 39 (18.8 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 10/20 (50%), Positives = 12/20 (60%)
Query: 36 AVDADAGVNGLVEYFIVPSQ 55
A DADA N L Y I P++
Sbjct: 155 AQDADAESNSLKIYTINPNE 174
>UNIPROTKB|F1SUA7 [details] [associations]
symbol:CDH23 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051480 "cytosolic calcium ion homeostasis"
evidence=IEA] [GO:0050957 "equilibrioception" evidence=IEA]
[GO:0045494 "photoreceptor cell maintenance" evidence=IEA]
[GO:0007605 "sensory perception of sound" evidence=IEA] [GO:0006816
"calcium ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0007156 "homophilic cell adhesion"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] InterPro:IPR002126
InterPro:IPR015919 InterPro:IPR020894 Pfam:PF00028 PRINTS:PR00205
PROSITE:PS00232 PROSITE:PS50268 SMART:SM00112 GO:GO:0016021
GO:GO:0005886 GO:GO:0005929 GO:GO:0045202 GO:GO:0005509
GO:GO:0007626 GO:GO:0045494 GO:GO:0006816 GO:GO:0007605
GO:GO:0051480 GO:GO:0005932 GO:GO:0001917 GO:GO:0007156
GO:GO:0060088 SUPFAM:SSF49313 GO:GO:0048563 Gene3D:2.60.40.60
GO:GO:0032420 GO:GO:0032426 GO:GO:0050957
GeneTree:ENSGT00700000104207 OMA:DVTEGQP EMBL:CU468981
EMBL:CT954215 EMBL:CU041351 Ensembl:ENSSSCT00000011250
Uniprot:F1SUA7
Length = 3306
Score = 85 (35.0 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 21/57 (36%), Positives = 34/57 (59%)
Query: 12 RTIPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFI---VPSQDKNIGTADGV 65
+ +P + V + TP G +IF+ + A+D D G+NGLV Y + +P D I ++ GV
Sbjct: 841 QNLPFVAEVVEGTPAGVSIFQVV-AIDLDEGLNGLVTYRMQVGMPRLDFLINSSSGV 896
Score = 52 (23.4 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 87 GQVTVNRSLDFEKTQRYLVTIVAS 110
G+V V R LD E+ Y++ +VAS
Sbjct: 1427 GEVFVARPLDREERDHYILKVVAS 1450
Score = 51 (23.0 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ YF+I+ P G + + LD EK Y + +VAS
Sbjct: 2613 WEYFTID-PISGLIQTAQRLDREKQAVYSLILVAS 2646
Score = 47 (21.6 bits), Expect = 0.00083, Sum P(2) = 0.00083
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 68 DRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
D T + F I+ G +TV +D EK Y +T+VA
Sbjct: 1301 DAYTSAQAKALFKIDAV-TGVITVKGLVDREKGDFYTLTVVA 1341
>MGI|MGI:1890219 [details] [associations]
symbol:Cdh23 "cadherin 23 (otocadherin)" species:10090 "Mus
musculus" [GO:0001917 "photoreceptor inner segment" evidence=IDA]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005929 "cilium" evidence=IDA] [GO:0005932
"microtubule basal body" evidence=IDA] [GO:0006816 "calcium ion
transport" evidence=ISO] [GO:0007155 "cell adhesion" evidence=TAS]
[GO:0007156 "homophilic cell adhesion" evidence=IEA] [GO:0007605
"sensory perception of sound" evidence=ISO;IGI;IMP] [GO:0007626
"locomotory behavior" evidence=IMP] [GO:0008344 "adult locomotory
behavior" evidence=IMP] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016339
"calcium-dependent cell-cell adhesion" evidence=ISS] [GO:0032420
"stereocilium" evidence=IDA] [GO:0032426 "stereocilium bundle tip"
evidence=IDA] [GO:0042472 "inner ear morphogenesis" evidence=IMP]
[GO:0042491 "auditory receptor cell differentiation" evidence=IMP]
[GO:0045202 "synapse" evidence=IDA] [GO:0045494 "photoreceptor cell
maintenance" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0048563 "post-embryonic organ morphogenesis"
evidence=IMP] [GO:0048839 "inner ear development" evidence=IMP]
[GO:0050953 "sensory perception of light stimulus"
evidence=ISO;IMP] [GO:0050957 "equilibrioception" evidence=ISO]
[GO:0051480 "cytosolic calcium ion homeostasis" evidence=ISO]
[GO:0060013 "righting reflex" evidence=IMP] [GO:0060088 "auditory
receptor cell stereocilium organization" evidence=IGI;IMP]
InterPro:IPR002126 InterPro:IPR015919 InterPro:IPR020894
Pfam:PF00028 PRINTS:PR00205 PROSITE:PS00232 PROSITE:PS50268
SMART:SM00112 MGI:MGI:1890219 GO:GO:0016021 GO:GO:0005886
GO:GO:0005929 GO:GO:0045202 GO:GO:0005509 GO:GO:0007626
GO:GO:0007605 eggNOG:NOG12793 GO:GO:0005932 GO:GO:0001917
GO:GO:0016339 GO:GO:0007156 GO:GO:0060088 SUPFAM:SSF49313
GO:GO:0048563 Gene3D:2.60.40.60 CTD:64072 HOGENOM:HOG000139588
HOVERGEN:HBG050768 KO:K06813 GO:GO:0032420 GO:GO:0032426
EMBL:AF308939 EMBL:AY026062 EMBL:AK016365 EMBL:AC079082
EMBL:AC079818 EMBL:AC079819 EMBL:AC153517 IPI:IPI00120997
IPI:IPI00311743 RefSeq:NP_075859.2 UniGene:Mm.440327 PDB:2WBX
PDB:2WCP PDB:2WD0 PDB:2WHV PDB:3MVS PDB:4APX PDB:4AQ8 PDB:4AQA
PDB:4AQE PDB:4AXW PDBsum:2WBX PDBsum:2WCP PDBsum:2WD0 PDBsum:2WHV
PDBsum:3MVS PDBsum:4APX PDBsum:4AQ8 PDBsum:4AQA PDBsum:4AQE
PDBsum:4AXW ProteinModelPortal:Q99PF4 SMR:Q99PF4 DIP:DIP-42152N
MINT:MINT-1895823 STRING:Q99PF4 PhosphoSite:Q99PF4 PRIDE:Q99PF4
Ensembl:ENSMUST00000105461 Ensembl:ENSMUST00000105463 GeneID:22295
KEGG:mmu:22295 UCSC:uc007feu.1 UCSC:uc007fev.1
GeneTree:ENSGT00700000104207 InParanoid:Q99PF4 OMA:DVTEGQP
EvolutionaryTrace:Q99PF4 NextBio:302447 Bgee:Q99PF4
Genevestigator:Q99PF4 GermOnline:ENSMUSG00000012819 GO:GO:0050953
Uniprot:Q99PF4
Length = 3354
Score = 86 (35.3 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 19/57 (33%), Positives = 33/57 (57%)
Query: 12 RTIPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFI---VPSQDKNIGTADGV 65
R +P + + + TP G ++++ + A+D D G+NGLV Y + +P D I + GV
Sbjct: 891 RNLPFVAEILEGTPAGVSVYQVV-AIDLDEGLNGLVSYRMQVGMPRMDFVINSTSGV 946
Score = 51 (23.0 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ YF+I+ P G + + LD EK Y + +VAS
Sbjct: 2661 WEYFTID-PISGLIQTAQRLDREKQAVYSLILVAS 2694
Score = 50 (22.7 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 79 FSINLPHQGQVTVNRSLDFEKTQ-RYLVTIVAS 110
F IN H G +T + LD+E + RY + + A+
Sbjct: 1683 FRIN-KHTGVITAAKELDYEISHGRYTLIVTAT 1714
Score = 49 (22.3 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 87 GQVTVNRSLDFEKTQRYLVTIVAS 110
G+V V + LD E+ Y++ +VAS
Sbjct: 1477 GEVFVAKPLDREELDHYILKVVAS 1500
Score = 46 (21.3 bits), Expect = 0.00085, Sum P(2) = 0.00085
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 68 DRVTVVDGYSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVA 109
D T + F I+ G +TV +D EK Y +T+VA
Sbjct: 1351 DAYTSAQAKALFKIDAI-TGVITVKGLVDREKGDFYTLTVVA 1391
>UNIPROTKB|F1NHQ5 [details] [associations]
symbol:LOC427547 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0007156 "homophilic cell adhesion" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR000233 InterPro:IPR000742
InterPro:IPR002126 InterPro:IPR015919 InterPro:IPR020894
Pfam:PF00008 Pfam:PF00028 Pfam:PF01049 PRINTS:PR00205
PROSITE:PS00232 PROSITE:PS50026 PROSITE:PS50268 SMART:SM00112
SMART:SM00181 InterPro:IPR000152 GO:GO:0016021 GO:GO:0005886
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 GO:GO:0007156 SUPFAM:SSF49313
Gene3D:2.60.40.60 GeneTree:ENSGT00700000104156 Pfam:PF02210
EMBL:AADN02031705 IPI:IPI00822157 Ensembl:ENSGALT00000039438
ArrayExpress:F1NHQ5 Uniprot:F1NHQ5
Length = 2500
Score = 85 (35.0 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 18/38 (47%), Positives = 25/38 (65%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIV 52
P + VS G+ ++K L AVDAD G+NG VEYF++
Sbjct: 21 PFLAVVSPQATEGTEVYK-LLAVDADEGINGTVEYFLL 57
Score = 48 (22.0 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 12/32 (37%), Positives = 21/32 (65%)
Query: 79 FSINLPHQGQVTVNRSLDFEKTQ-RYLVTIVA 109
FSI+ G +++ RS+D+E Q +YL+ + A
Sbjct: 162 FSIDQA-TGDISLTRSVDYESDQHQYLLLVRA 192
>UNIPROTKB|F1NHQ1 [details] [associations]
symbol:LOC427547 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0007156 "homophilic cell adhesion" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR000233 InterPro:IPR000742
InterPro:IPR002126 InterPro:IPR015919 InterPro:IPR020894
Pfam:PF00008 Pfam:PF00028 Pfam:PF01049 PRINTS:PR00205
PROSITE:PS00232 PROSITE:PS50026 PROSITE:PS50268 SMART:SM00112
SMART:SM00181 InterPro:IPR000152 GO:GO:0016021 GO:GO:0005886
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 GO:GO:0007156 SUPFAM:SSF49313
Gene3D:2.60.40.60 GeneTree:ENSGT00700000104156 Pfam:PF02210
EMBL:AADN02031705 IPI:IPI00823067 Ensembl:ENSGALT00000039440
ArrayExpress:F1NHQ1 Uniprot:F1NHQ1
Length = 2501
Score = 85 (35.0 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 18/38 (47%), Positives = 25/38 (65%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIV 52
P + VS G+ ++K L AVDAD G+NG VEYF++
Sbjct: 21 PFLAVVSPQATEGTEVYK-LLAVDADEGINGTVEYFLL 57
Score = 48 (22.0 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 12/32 (37%), Positives = 21/32 (65%)
Query: 79 FSINLPHQGQVTVNRSLDFEKTQ-RYLVTIVA 109
FSI+ G +++ RS+D+E Q +YL+ + A
Sbjct: 162 FSIDQA-TGDISLTRSVDYESDQHQYLLLVRA 192
>UNIPROTKB|F1NJK1 [details] [associations]
symbol:LOC427547 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0007156 "homophilic cell adhesion" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR000233 InterPro:IPR000742
InterPro:IPR002126 InterPro:IPR015919 InterPro:IPR020894
Pfam:PF00008 Pfam:PF00028 Pfam:PF01049 PRINTS:PR00205
PROSITE:PS00232 PROSITE:PS50026 PROSITE:PS50268 SMART:SM00112
SMART:SM00181 InterPro:IPR000152 GO:GO:0016021 GO:GO:0005886
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 GO:GO:0007156 SUPFAM:SSF49313
Gene3D:2.60.40.60 GeneTree:ENSGT00700000104156 Pfam:PF02210
EMBL:AADN02031705 IPI:IPI00592269 Ensembl:ENSGALT00000007377
OMA:DYESDQH ArrayExpress:F1NJK1 Uniprot:F1NJK1
Length = 2537
Score = 85 (35.0 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 18/38 (47%), Positives = 25/38 (65%)
Query: 15 PVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIV 52
P + VS G+ ++K L AVDAD G+NG VEYF++
Sbjct: 21 PFLAVVSPQATEGTEVYK-LLAVDADEGINGTVEYFLL 57
Score = 48 (22.0 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 12/32 (37%), Positives = 21/32 (65%)
Query: 79 FSINLPHQGQVTVNRSLDFEKTQ-RYLVTIVA 109
FSI+ G +++ RS+D+E Q +YL+ + A
Sbjct: 162 FSIDQA-TGDISLTRSVDYESDQHQYLLLVRA 192
>UNIPROTKB|F1MXP9 [details] [associations]
symbol:CDH23 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051480 "cytosolic calcium ion homeostasis"
evidence=IEA] [GO:0050957 "equilibrioception" evidence=IEA]
[GO:0045494 "photoreceptor cell maintenance" evidence=IEA]
[GO:0007605 "sensory perception of sound" evidence=IEA] [GO:0006816
"calcium ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0007156 "homophilic cell adhesion"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] InterPro:IPR002126
InterPro:IPR015919 InterPro:IPR020894 Pfam:PF00028 PRINTS:PR00205
PROSITE:PS00232 PROSITE:PS50268 SMART:SM00112 GO:GO:0016021
GO:GO:0005886 GO:GO:0005929 GO:GO:0045202 GO:GO:0005509
GO:GO:0007626 GO:GO:0045494 GO:GO:0006816 GO:GO:0007605
GO:GO:0051480 GO:GO:0005932 GO:GO:0001917 GO:GO:0007156
GO:GO:0060088 SUPFAM:SSF49313 GO:GO:0048563 Gene3D:2.60.40.60
GO:GO:0032420 GO:GO:0032426 GO:GO:0050957
GeneTree:ENSGT00700000104207 OMA:DVTEGQP EMBL:DAAA02061868
EMBL:DAAA02061863 EMBL:DAAA02061864 EMBL:DAAA02061865
EMBL:DAAA02061866 EMBL:DAAA02061867 IPI:IPI00698312
Ensembl:ENSBTAT00000028652 Uniprot:F1MXP9
Length = 3354
Score = 84 (34.6 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 19/57 (33%), Positives = 34/57 (59%)
Query: 12 RTIPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFI---VPSQDKNIGTADGV 65
+ +P + V + TP G ++++ + A+D D G+NGLV Y + +P D I ++ GV
Sbjct: 891 QNLPFVAEVLEGTPAGVSVYQVV-AIDLDEGLNGLVSYRMQVGMPRMDFVINSSSGV 946
Score = 51 (23.0 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 87 GQVTVNRSLDFEKTQRYLVTIVAS 110
G++ V R LD E+ Y++ +VAS
Sbjct: 1477 GEIFVARPLDREELDHYILKVVAS 1500
Score = 51 (23.0 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ YF+I+ P G + + LD EK Y + +VAS
Sbjct: 2661 WEYFTID-PISGLIQTAQRLDREKQAVYSLILVAS 2694
>UNIPROTKB|F1P8X5 [details] [associations]
symbol:CDH23 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007156 "homophilic cell adhesion" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=IEA] InterPro:IPR002126 InterPro:IPR015919
InterPro:IPR020894 Pfam:PF00028 PRINTS:PR00205 PROSITE:PS00232
PROSITE:PS50268 SMART:SM00112 GO:GO:0016021 GO:GO:0005886
GO:GO:0005509 GO:GO:0007156 SUPFAM:SSF49313 Gene3D:2.60.40.60
GeneTree:ENSGT00700000104207 OMA:DVTEGQP EMBL:AAEX03002815
EMBL:AAEX03002816 Ensembl:ENSCAFT00000022666 Uniprot:F1P8X5
Length = 3359
Score = 83 (34.3 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 19/57 (33%), Positives = 34/57 (59%)
Query: 12 RTIPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFI---VPSQDKNIGTADGV 65
+ +P + V + TP G ++++ + A+D D G+NGLV Y + +P D I ++ GV
Sbjct: 896 QNLPSVAEVLEGTPAGVSVYQVV-AIDLDEGLNGLVSYRMQVGMPRMDFLINSSSGV 951
Score = 52 (23.4 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 87 GQVTVNRSLDFEKTQRYLVTIVAS 110
G+V V R LD E+ Y++ +VAS
Sbjct: 1482 GEVFVARPLDREELDHYILKVVAS 1505
Score = 52 (23.4 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ YF+I+ P G + + LD EK Y + +VAS
Sbjct: 2666 WEYFTID-PVSGLIQTAQRLDREKQALYSLILVAS 2699
>UNIPROTKB|F1LPE5 [details] [associations]
symbol:Cdh23 "Cadherin-23" species:10116 "Rattus
norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007156 "homophilic
cell adhesion" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR002126 InterPro:IPR015919
InterPro:IPR020894 Pfam:PF00028 PRINTS:PR00205 PROSITE:PS00232
PROSITE:PS50268 SMART:SM00112 GO:GO:0016021 GO:GO:0005886
GO:GO:0005509 GO:GO:0007156 SUPFAM:SSF49313 Gene3D:2.60.40.60
GeneTree:ENSGT00700000104207 IPI:IPI00480591
Ensembl:ENSRNOT00000048029 ArrayExpress:F1LPE5 Uniprot:F1LPE5
Length = 3271
Score = 83 (34.3 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 19/57 (33%), Positives = 33/57 (57%)
Query: 12 RTIPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFI---VPSQDKNIGTADGV 65
+ +P + V + TP G ++++ + A+D D G+NGLV Y + +P D I + GV
Sbjct: 843 QNLPFVAEVLEGTPAGVSVYQVV-AIDLDEGLNGLVSYRMQVGMPRMDFVINSTSGV 898
Score = 51 (23.0 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ YF+I+ P G + + LD EK Y + +VAS
Sbjct: 2613 WEYFTID-PISGLIQTAQRLDREKQAVYSLILVAS 2646
>UNIPROTKB|F1M2P9 [details] [associations]
symbol:Cdh23 "Cadherin-23" species:10116 "Rattus
norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007156 "homophilic
cell adhesion" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR002126 InterPro:IPR015919
InterPro:IPR020894 Pfam:PF00028 PRINTS:PR00205 PROSITE:PS00232
PROSITE:PS50268 SMART:SM00112 GO:GO:0016021 GO:GO:0005886
GO:GO:0005929 GO:GO:0045202 GO:GO:0005509 GO:GO:0007626
GO:GO:0045494 GO:GO:0006816 GO:GO:0007605 GO:GO:0051480
GO:GO:0005932 GO:GO:0001917 GO:GO:0007156 GO:GO:0060088
SUPFAM:SSF49313 GO:GO:0048563 Gene3D:2.60.40.60 GO:GO:0032420
GO:GO:0032426 GO:GO:0050957 IPI:IPI00566642
Ensembl:ENSRNOT00000043015 ArrayExpress:F1M2P9 Uniprot:F1M2P9
Length = 3306
Score = 83 (34.3 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 19/57 (33%), Positives = 33/57 (57%)
Query: 12 RTIPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFI---VPSQDKNIGTADGV 65
+ +P + V + TP G ++++ + A+D D G+NGLV Y + +P D I + GV
Sbjct: 843 QNLPFVAEVLEGTPAGVSVYQVV-AIDLDEGLNGLVSYRMQVGMPRMDFVINSTSGV 898
Score = 51 (23.0 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ YF+I+ P G + + LD EK Y + +VAS
Sbjct: 2613 WEYFTID-PISGLIQTAQRLDREKQAVYSLILVAS 2646
>RGD|619760 [details] [associations]
symbol:Cdh23 "cadherin-related 23" species:10116 "Rattus
norvegicus" [GO:0001917 "photoreceptor inner segment" evidence=ISO]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005929 "cilium" evidence=ISO]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0006816
"calcium ion transport" evidence=ISO] [GO:0007156 "homophilic cell
adhesion" evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=ISO] [GO:0007626 "locomotory behavior" evidence=ISO]
[GO:0008344 "adult locomotory behavior" evidence=ISO] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0032420 "stereocilium"
evidence=ISO] [GO:0032426 "stereocilium bundle tip" evidence=ISO]
[GO:0042472 "inner ear morphogenesis" evidence=ISO] [GO:0042491
"auditory receptor cell differentiation" evidence=ISO] [GO:0045202
"synapse" evidence=ISO] [GO:0045494 "photoreceptor cell
maintenance" evidence=ISO] [GO:0048563 "post-embryonic organ
morphogenesis" evidence=ISO] [GO:0048839 "inner ear development"
evidence=ISO] [GO:0050910 "detection of mechanical stimulus
involved in sensory perception of sound" evidence=TAS] [GO:0050953
"sensory perception of light stimulus" evidence=ISO] [GO:0050957
"equilibrioception" evidence=ISO] [GO:0051480 "cytosolic calcium
ion homeostasis" evidence=ISO] [GO:0060013 "righting reflex"
evidence=ISO] [GO:0060088 "auditory receptor cell stereocilium
organization" evidence=ISO] InterPro:IPR002126 InterPro:IPR015919
InterPro:IPR020894 Pfam:PF00028 PRINTS:PR00205 PROSITE:PS00232
PROSITE:PS50268 SMART:SM00112 RGD:619760 GO:GO:0016021
GO:GO:0005886 GO:GO:0005509 GO:GO:0050910 eggNOG:NOG12793
GO:GO:0007156 SUPFAM:SSF49313 Gene3D:2.60.40.60 CTD:64072
HOGENOM:HOG000139588 HOVERGEN:HBG050768 KO:K06813 EMBL:AB053447
IPI:IPI00480591 RefSeq:NP_446096.1 UniGene:Rn.208796
ProteinModelPortal:P58365 STRING:P58365 PhosphoSite:P58365
PRIDE:P58365 GeneID:114102 KEGG:rno:114102 UCSC:RGD:619760
NextBio:618265 ArrayExpress:P58365 Genevestigator:P58365
Uniprot:P58365
Length = 3317
Score = 83 (34.3 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 19/57 (33%), Positives = 33/57 (57%)
Query: 12 RTIPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFI---VPSQDKNIGTADGV 65
+ +P + V + TP G ++++ + A+D D G+NGLV Y + +P D I + GV
Sbjct: 889 QNLPFVAEVLEGTPAGVSVYQVV-AIDLDEGLNGLVSYRMQVGMPRMDFVINSTSGV 944
Score = 51 (23.0 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ YF+I+ P G + + LD EK Y + +VAS
Sbjct: 2659 WEYFTID-PISGLIQTAQRLDREKQAVYSLILVAS 2692
Score = 50 (22.7 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 87 GQVTVNRSLDFEKTQRYLVTIVAS 110
G+V V + LD E+ Y++ IVAS
Sbjct: 1475 GEVFVAKPLDREELDHYILKIVAS 1498
>UNIPROTKB|P58365 [details] [associations]
symbol:Cdh23 "Cadherin-23" species:10116 "Rattus
norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0007156 "homophilic cell adhesion" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR002126
InterPro:IPR015919 InterPro:IPR020894 Pfam:PF00028 PRINTS:PR00205
PROSITE:PS00232 PROSITE:PS50268 SMART:SM00112 RGD:619760
GO:GO:0016021 GO:GO:0005886 GO:GO:0005509 GO:GO:0050910
eggNOG:NOG12793 GO:GO:0007156 SUPFAM:SSF49313 Gene3D:2.60.40.60
CTD:64072 HOGENOM:HOG000139588 HOVERGEN:HBG050768 KO:K06813
EMBL:AB053447 IPI:IPI00480591 RefSeq:NP_446096.1 UniGene:Rn.208796
ProteinModelPortal:P58365 STRING:P58365 PhosphoSite:P58365
PRIDE:P58365 GeneID:114102 KEGG:rno:114102 UCSC:RGD:619760
NextBio:618265 ArrayExpress:P58365 Genevestigator:P58365
Uniprot:P58365
Length = 3317
Score = 83 (34.3 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 19/57 (33%), Positives = 33/57 (57%)
Query: 12 RTIPVIVRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFI---VPSQDKNIGTADGV 65
+ +P + V + TP G ++++ + A+D D G+NGLV Y + +P D I + GV
Sbjct: 889 QNLPFVAEVLEGTPAGVSVYQVV-AIDLDEGLNGLVSYRMQVGMPRMDFVINSTSGV 944
Score = 51 (23.0 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
+ YF+I+ P G + + LD EK Y + +VAS
Sbjct: 2659 WEYFTID-PISGLIQTAQRLDREKQAVYSLILVAS 2692
Score = 50 (22.7 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 87 GQVTVNRSLDFEKTQRYLVTIVAS 110
G+V V + LD E+ Y++ IVAS
Sbjct: 1475 GEVFVAKPLDREELDHYILKIVAS 1498
>WB|WBGene00000395 [details] [associations]
symbol:cdh-3 species:6239 "Caenorhabditis elegans"
[GO:0005886 "plasma membrane" evidence=IEA;IDA] [GO:0005509
"calcium ion binding" evidence=IEA] [GO:0007156 "homophilic cell
adhesion" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0045138 "tail tip morphogenesis"
evidence=IMP] [GO:0016331 "morphogenesis of embryonic epithelium"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005198
"structural molecule activity" evidence=TAS] InterPro:IPR000742
InterPro:IPR002126 InterPro:IPR015919 InterPro:IPR020894
Pfam:PF00028 PRINTS:PR00205 PROSITE:PS00232 PROSITE:PS50268
SMART:SM00112 SMART:SM00181 GO:GO:0016021 GO:GO:0005886
GO:GO:0005737 GO:GO:0005198 GO:GO:0030054 GO:GO:0005509
InterPro:IPR013032 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 eggNOG:NOG12793
InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025 GO:GO:0016331
GO:GO:0007156 GO:GO:0045138 SUPFAM:SSF49313 Gene3D:2.60.40.60
GeneTree:ENSGT00700000104170 Pfam:PF02210 EMBL:FO080308 PIR:S44887
RefSeq:NP_498687.1 ProteinModelPortal:P34616 SMR:P34616
PaxDb:P34616 PRIDE:P34616 EnsemblMetazoa:ZK112.7 GeneID:176085
KEGG:cel:CELE_ZK112.7 UCSC:ZK112.7 CTD:176085 WormBase:ZK112.7
HOGENOM:HOG000015891 InParanoid:P34616 OMA:GWITVAG NextBio:891046
ArrayExpress:P34616 Uniprot:P34616
Length = 3343
Score = 79 (32.9 bits), Expect = 0.00079, Sum P(2) = 0.00079
Identities = 21/58 (36%), Positives = 33/58 (56%)
Query: 1 LTCTVKVSNRKRTIPVI--VRVSDLTPVGSTIFKNLRAVDADAGVNGLVEYFIVPSQD 56
+T VK N+ I I + V + P+G TIF ++A D D+G++G+V Y I+ D
Sbjct: 619 ITLIVKPLNQHSPICQITEIHVLENAPIG-TIFGRIQARDEDSGLSGVVSYKILTKSD 675
Score = 59 (25.8 bits), Expect = 0.00079, Sum P(2) = 0.00079
Identities = 12/21 (57%), Positives = 14/21 (66%)
Query: 87 GQVTVNRSLDFEKTQRYLVTI 107
G V VN SLDFEK Q Y + +
Sbjct: 2198 GMVFVNDSLDFEKKQSYRIKV 2218
>UNIPROTKB|E7EM97 [details] [associations]
symbol:PCDH15 "Protocadherin-15" species:9606 "Homo
sapiens" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007156 "homophilic
cell adhesion" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR002126 InterPro:IPR015919
InterPro:IPR020894 Pfam:PF00028 PRINTS:PR00205 PROSITE:PS00232
PROSITE:PS50268 SMART:SM00112 GO:GO:0016021 GO:GO:0005886
GO:GO:0005509 GO:GO:0007156 SUPFAM:SSF49313 Gene3D:2.60.40.60
EMBL:AC074322 EMBL:AL353784 EMBL:AC013737 EMBL:AC024073
EMBL:AC027671 EMBL:AL356114 EMBL:AL360214 EMBL:AC016817
EMBL:AL365496 HGNC:HGNC:14674 EMBL:AC016822 EMBL:AC051618
EMBL:AC069545 EMBL:AC079271 EMBL:AL355314 EMBL:AL390785
EMBL:AL391356 EMBL:AL603835 IPI:IPI00893117
ProteinModelPortal:E7EM97 SMR:E7EM97 Ensembl:ENST00000414367
ArrayExpress:E7EM97 Bgee:E7EM97 Uniprot:E7EM97
Length = 329
Score = 92 (37.4 bits), Expect = 0.00080, P = 0.00080
Identities = 32/95 (33%), Positives = 43/95 (45%)
Query: 20 VSDLTPVGSTIFKNLR----AVDADAGVNGLVEYFIVPSQDKNIGTADGVGKDRVTVVDG 75
V++LTPVG+TIF A D D G NG +EY I + D D D
Sbjct: 156 VNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQYNPD------DPTSNDT------ 203
Query: 76 YSYFSINLPHQGQVTVNRSLDFEKTQRYLVTIVAS 110
F I L G + + + L++E RY V I A+
Sbjct: 204 ---FEIPLMLTGNIVLRKRLNYEDKTRYFVIIQAN 235
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.136 0.382 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 110 110 0.00091 102 3 11 22 0.44 30
29 0.42 32
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 24
No. of states in DFA: 514 (55 KB)
Total size of DFA: 95 KB (2069 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 10.86u 0.10s 10.96t Elapsed: 00:00:12
Total cpu time: 10.86u 0.10s 10.96t Elapsed: 00:00:13
Start: Thu Aug 15 12:03:52 2013 End: Thu Aug 15 12:04:05 2013