BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9049
(64 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9VH19|LMLN_DROME Leishmanolysin-like peptidase OS=Drosophila melanogaster
GN=Invadolysin PE=2 SV=2
Length = 683
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/32 (78%), Positives = 29/32 (90%)
Query: 4 RLDAEKFQLINNTVLPEAVHFWEQALMVRKTE 35
RL+ EKF LIN+TVLPEAV FWEQALMVR+T+
Sbjct: 92 RLEEEKFNLINDTVLPEAVQFWEQALMVRETK 123
>sp|Q29AK2|LMLN_DROPS Leishmanolysin-like peptidase OS=Drosophila pseudoobscura
pseudoobscura GN=GA17800 PE=3 SV=1
Length = 684
Score = 57.8 bits (138), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/32 (78%), Positives = 29/32 (90%)
Query: 4 RLDAEKFQLINNTVLPEAVHFWEQALMVRKTE 35
RL+ EKF LIN+TVLPEAV FWEQALMVR+T+
Sbjct: 92 RLEEEKFNLINDTVLPEAVQFWEQALMVRETK 123
>sp|Q61YG1|LMLN_CAEBR Leishmanolysin-like peptidase OS=Caenorhabditis briggsae
GN=CBG03556 PE=3 SV=2
Length = 663
Score = 36.6 bits (83), Expect = 0.044, Method: Composition-based stats.
Identities = 16/28 (57%), Positives = 19/28 (67%)
Query: 5 LDAEKFQLINNTVLPEAVHFWEQALMVR 32
L AE +N T+LPEAV +WE AL VR
Sbjct: 83 LTAEVQHFVNTTLLPEAVGYWENALRVR 110
Score = 36.2 bits (82), Expect = 0.054, Method: Composition-based stats.
Identities = 16/27 (59%), Positives = 19/27 (70%)
Query: 38 TVLPEAVHFWEQALMVRKTEKVIRLNR 64
T+LPEAV +WE AL VR + IRL R
Sbjct: 94 TLLPEAVGYWENALRVRPMKTPIRLRR 120
>sp|O62446|LMLN_CAEEL Leishmanolysin-like peptidase OS=Caenorhabditis elegans GN=Y43F4A.1
PE=2 SV=1
Length = 663
Score = 36.6 bits (83), Expect = 0.050, Method: Composition-based stats.
Identities = 16/28 (57%), Positives = 19/28 (67%)
Query: 5 LDAEKFQLINNTVLPEAVHFWEQALMVR 32
L AE +N T+LPEAV +WE AL VR
Sbjct: 83 LTAEVQNFVNTTLLPEAVGYWENALRVR 110
Score = 35.8 bits (81), Expect = 0.087, Method: Composition-based stats.
Identities = 16/27 (59%), Positives = 18/27 (66%)
Query: 38 TVLPEAVHFWEQALMVRKTEKVIRLNR 64
T+LPEAV +WE AL VR IRL R
Sbjct: 94 TLLPEAVGYWENALRVRPMTTPIRLRR 120
>sp|Q9LKJ3|PHSH_WHEAT Alpha-glucan phosphorylase, H isozyme OS=Triticum aestivum PE=2
SV=1
Length = 832
Score = 30.4 bits (67), Expect = 3.7, Method: Composition-based stats.
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Query: 14 NNTVLPEAVHFWEQALMVRKTEKNTVLPEAV--HFWEQALMVRK 55
N+TVLPEA+ W QA+M + ++ + E + F E + RK
Sbjct: 369 NHTVLPEALEKWSQAVMKKLLPRHMEIIEEIDKRFREMVISTRK 412
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.132 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,220,099
Number of Sequences: 539616
Number of extensions: 529702
Number of successful extensions: 1775
Number of sequences better than 100.0: 5
Number of HSP's better than 100.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1766
Number of HSP's gapped (non-prelim): 9
length of query: 64
length of database: 191,569,459
effective HSP length: 36
effective length of query: 28
effective length of database: 172,143,283
effective search space: 4820011924
effective search space used: 4820011924
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 55 (25.8 bits)