Query psy9052
Match_columns 356
No_of_seqs 161 out of 925
Neff 5.9
Searched_HMMs 29240
Date Fri Aug 16 17:44:15 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9052.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9052hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qij_A Protein 4.1; cytoskelet 100.0 5.2E-49 1.8E-53 378.5 21.8 197 1-206 95-296 (296)
2 1ef1_A Moesin; membrane, FERM 100.0 4.2E-47 1.4E-51 362.4 22.3 209 1-210 80-293 (294)
3 1h4r_A Merlin; FERM, neurofibr 100.0 3.3E-46 1.1E-50 360.0 23.4 209 1-210 100-313 (314)
4 2i1j_A Moesin; FERM, coiled-co 100.0 1.3E-43 4.6E-48 368.7 23.1 211 1-212 83-298 (575)
5 1mix_A Talin; focal adhesion, 100.0 2.8E-40 9.4E-45 299.4 19.2 195 1-205 2-205 (206)
6 4f7g_A Talin-1; alpha-helix bu 100.0 2.3E-36 8E-41 278.5 19.6 191 10-210 23-221 (222)
7 3ivf_A Talin-1; FERM domain, c 100.0 4.7E-34 1.6E-38 281.4 20.5 195 1-205 167-370 (371)
8 4dxa_B KREV interaction trappe 100.0 1.8E-33 6.1E-38 272.8 16.9 192 2-199 99-313 (322)
9 2al6_A Focal adhesion kinase 1 100.0 5.1E-31 1.7E-35 260.9 20.1 205 1-210 97-326 (375)
10 3pvl_A Myosin VIIA isoform 1; 100.0 1.9E-30 6.5E-35 273.5 21.4 195 1-201 355-568 (655)
11 3au4_A Myosin-X; protein-prote 100.0 1.8E-28 6.2E-33 253.3 22.7 202 1-211 306-543 (555)
12 4eku_A Protein-tyrosine kinase 99.9 1.3E-25 4.3E-30 224.0 20.5 204 1-208 117-341 (392)
13 2j0j_A Focal adhesion kinase 1 99.8 3.3E-20 1.1E-24 194.8 20.5 201 1-205 97-321 (656)
14 1hbk_A ACBP, acyl-COA binding 97.2 0.0021 7.2E-08 51.0 9.8 80 20-120 6-88 (89)
15 3epy_A Acyl-COA-binding domain 97.2 0.0011 3.8E-08 52.7 7.4 81 19-120 7-88 (89)
16 2cb8_A Acyl-COA-binding protei 96.9 0.0037 1.3E-07 49.4 8.4 80 20-120 6-86 (87)
17 2lbb_A Acyl COA binding protei 96.9 0.0019 6.6E-08 52.0 6.4 80 20-120 14-95 (96)
18 1st7_A ACBP, acyl-COA-binding 96.8 0.0037 1.3E-07 49.2 7.7 75 20-115 5-79 (86)
19 2cop_A Acyl-coenzyme A binding 96.7 0.0053 1.8E-07 50.5 8.2 82 19-121 11-93 (109)
20 2wh5_A Acyl-COA-binding domain 96.5 0.011 3.7E-07 48.5 8.6 77 19-116 11-91 (106)
21 2cqu_A Peroxisomal D3,D2-enoyl 96.4 0.011 3.7E-07 49.2 7.9 81 19-120 19-100 (116)
22 3fp5_A Acyl-COA binding protei 96.1 0.027 9.1E-07 46.1 8.7 75 20-115 8-86 (106)
23 3flv_A Acyl-COA-binding domain 96.0 0.023 8E-07 47.4 8.2 81 19-120 27-112 (119)
24 4dx8_A Integrin beta-1-binding 78.6 25 0.00084 30.3 11.1 87 106-198 42-141 (154)
25 1xr0_B FGFR signalling adaptor 78.0 25 0.00086 29.4 10.8 66 131-196 26-95 (129)
26 3so6_A LDL receptor adaptor pr 72.6 23 0.00079 28.7 9.3 68 130-197 42-118 (137)
27 1p5t_A DOK1, docking protein 1 71.3 34 0.0012 28.4 9.9 58 132-189 25-92 (127)
28 1j0w_A Downstream of tyrosine 70.9 36 0.0012 27.2 9.7 59 131-189 20-85 (103)
29 2v76_A Docking protein 1; alte 70.4 35 0.0012 27.4 9.6 58 132-189 23-90 (107)
30 1aqc_A X11; PTB domain; 2.30A 68.3 25 0.00086 30.3 8.9 46 131-176 63-111 (172)
31 1qqg_A IRS-1, insulin receptor 67.1 26 0.00088 32.3 9.3 70 132-201 178-253 (264)
32 2kuq_A Fibroblast growth facto 66.6 62 0.0021 27.8 11.2 70 132-201 34-107 (153)
33 2kup_A Fibroblast growth facto 62.8 49 0.0017 28.2 9.3 58 132-189 34-95 (146)
34 2dlw_A Docking protein 2, isof 59.0 43 0.0015 27.2 8.1 64 132-198 28-98 (113)
35 4dbb_A Amyloid beta A4 precurs 57.7 37 0.0013 28.9 7.9 46 130-175 51-99 (162)
36 2ej8_A DCC-interacting protein 48.3 40 0.0014 28.5 6.6 47 130-176 55-107 (160)
37 2ela_A Adapter protein contain 43.5 44 0.0015 28.9 6.2 47 130-176 68-120 (175)
38 3d8d_A Amyloid beta A4 precurs 37.3 1.9E+02 0.0066 24.5 9.3 70 130-199 53-135 (148)
39 1ntv_A Disabled homolog 1; bet 35.1 67 0.0023 26.8 5.9 47 130-176 59-111 (152)
40 1n3h_A SHC transforming protei 34.0 51 0.0018 29.3 5.2 65 131-195 119-191 (207)
41 3f0w_A NUMB-R, NUMB-like prote 32.9 1.5E+02 0.0053 24.9 7.9 64 131-195 77-149 (168)
42 3suz_A Amyloid beta A4 precurs 29.5 1.3E+02 0.0044 28.9 7.6 44 132-175 66-112 (388)
43 1p3r_A Disabled homolog 2; PTB 29.1 93 0.0032 26.2 5.8 47 130-176 58-110 (160)
44 4fxw_B Splicing factor 1; UHM, 22.6 37 0.0013 28.2 1.9 20 285-304 103-122 (124)
45 3ml4_A Protein DOK-7; tyrosine 22.0 3.3E+02 0.011 24.7 8.2 69 131-199 130-204 (224)
46 2oqb_A Histone-arginine methyl 20.5 3.5E+02 0.012 22.0 9.5 64 133-199 35-103 (117)
No 1
>3qij_A Protein 4.1; cytoskeleton, structural genomics, structural genomics conso SGC; 1.80A {Homo sapiens} PDB: 1gg3_A 3bin_A 2he7_A 2rq1_A
Probab=100.00 E-value=5.2e-49 Score=378.47 Aligned_cols=197 Identities=28% Similarity=0.616 Sum_probs=185.1
Q ss_pred CcccCCCCCCCchhHHHHHHHHHHHHHHcCcccCCHHHHHHHHHHHHHhhhCCCCCccchhhhhhhhccCCchhhhcCCc
Q psy9052 1 MYYVSGISLITDEMTRYHCFLQLKNDIIEGRIQCNLDDAVVLASYCMQAEFGNYNSERHTLEYLKDFALFPKDLVENGHN 80 (356)
Q Consensus 1 kFY~~d~~~L~de~TR~LlYLQlr~dIl~Grlpcs~e~av~LAAL~lQae~GDy~~~~h~~~yl~~~~~lP~~i~~~~~~ 80 (356)
|||+++|..|.|++||+|+|+|+|+||++|+++|+.++|++||||++|+++|||+++.|..+|+....++|.+.
T Consensus 95 kfy~~~~~~l~~~~tr~l~ylQ~~~dil~G~~~c~~e~a~~LAAl~~Qae~Gd~~~~~~~~~yl~~~~~~P~~~------ 168 (296)
T 3qij_A 95 KFYPPDPAQLTEDITRYYLCLQLRQDIVAGRLPCSFATLALLGSYTIQSELGDYDPELHGVDYVSDFKLAPNQT------ 168 (296)
T ss_dssp SSCCSCGGGSSCHHHHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHCSCCHHHHTTCCCTTSCCSSSCC------
T ss_pred EEeCCCchhccCHHHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHhcCCCCccccchhhCcHhhcCCcCH------
Confidence 79999999999999999999999999999999999999999999999999999999889899999889999752
Q ss_pred chHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHhcCCCCCceeEEeecCCCCeEEEEeeccceEE-eCccceeeeecccc
Q psy9052 81 GLLERLTDAVIQQHSALVGLSQGTAEEYYILAAQQLDGYGQETFLVKDEHGLETILGVTLKGIIV-SGTNSSKFYKWAEI 159 (356)
Q Consensus 81 ~~le~~~~~I~~~Hk~L~GmS~~eAe~~FL~~a~~Lp~YGv~~F~Vkd~~~~~l~LGV~~~GI~V-~~~~~~~~f~W~~I 159 (356)
++|++.|.+.|++++|+|+.+|+.+||++|++||+||+++|.|++..|.++||||+.+||.| +.++++..|+|++|
T Consensus 169 ---~~~~~~I~~~h~~~~g~s~~eA~~~yL~~a~~l~~yG~~~f~vk~~~~~~~~LgV~~~Gi~v~~~~~kl~~f~w~~I 245 (296)
T 3qij_A 169 ---KELEEKVMELHKSYRSMTPAQADLEFLENAKKLSMYGVDLHKAKDLEGVDIILGVCSSGLLVYKDKLRINRFPWPKV 245 (296)
T ss_dssp ---HHHHHHHHHHHHTCCSCCHHHHHHHHHHHHTTSTTTTCEEEEEECTTSCEEEEEECSSEEEEEETTEEEEEEEGGGE
T ss_pred ---HHHHHHHHHHHHHccCCCHHHHHHHHHHHHhcccccCceEEEEEcCCCCEEEEEECCCeEEEEeCCCeEEEEEhhhc
Confidence 56889999999999999999999999999999999999999999999999999999999999 77777899999999
Q ss_pred cceeccCceEEEEEcCCC----CceEEEEeCCHHHHHHHHHHHHHhhHHhh
Q psy9052 160 ANVLNHKKNFGIETSNAD----DHIVNFVFPDVESAKYVFRMCVHQHTFYM 206 (356)
Q Consensus 160 ~~lsf~~k~F~I~~~~~~----~~~~~F~~~s~~~AK~Lwklcie~H~Ffr 206 (356)
.+|+|++|+|+|++.+.+ +.++.|++++.++||+||++|+++|+|||
T Consensus 246 ~~~s~~~k~F~i~~~~~~~~~~~~~~~f~~~~~~~~k~l~~~c~~~h~ffr 296 (296)
T 3qij_A 246 LKISYKRSSFFIKIRPGEQEQYESTIGFKLPSYRAAKKLWKVCVEHHTFFR 296 (296)
T ss_dssp EEEEEETTEEEEEEC-------CEEEEEECSSHHHHHHHHHHHHHHHHHTC
T ss_pred CEEEecCCEEEEEEecCccCCccceEEEECCCHHHHHHHHHHHHHhccccC
Confidence 999999999999997542 35789999999999999999999999997
No 2
>1ef1_A Moesin; membrane, FERM domain, tail domain, membrane protein; 1.90A {Homo sapiens} SCOP: a.11.2.1 b.55.1.5 d.15.1.4 PDB: 1sgh_A 1j19_A 2emt_A 2ems_A 2d10_A 2d11_A 2yvc_A 2d2q_A 2zpy_A 1gc7_A 1gc6_A 1ni2_A
Probab=100.00 E-value=4.2e-47 Score=362.40 Aligned_cols=209 Identities=27% Similarity=0.477 Sum_probs=192.7
Q ss_pred CcccCCCC-CCCchhHHHHHHHHHHHHHHcCcccCCHHHHHHHHHHHHHhhhCCCCCccchhhhhhhhccCCchhhhcCC
Q psy9052 1 MYYVSGIS-LITDEMTRYHCFLQLKNDIIEGRIQCNLDDAVVLASYCMQAEFGNYNSERHTLEYLKDFALFPKDLVENGH 79 (356)
Q Consensus 1 kFY~~d~~-~L~de~TR~LlYLQlr~dIl~Grlpcs~e~av~LAAL~lQae~GDy~~~~h~~~yl~~~~~lP~~i~~~~~ 79 (356)
|||++++. .+.|+.||+|+|+|+|+||++|+++|+.++|++||||++|+++|||+++.|..+|++...|+|+++++..+
T Consensus 80 kf~~~~~~~~l~~~~~~~l~y~Q~~~dil~g~~~~~~e~a~~Laal~~q~~~Gd~~~~~~~~~~l~~~~~lP~~~~~~~~ 159 (294)
T 1ef1_A 80 KFYPEDVSEELIQDITQRLFFLQVKEGILNDDIYCPPETAVLLASYAVQSKYGDFNKEVHKSGYLAGDKLLPQRVLEQHK 159 (294)
T ss_dssp SSCCSCHHHHCCSHHHHHHHHHHHHHHHHTTSSCCCHHHHHHHHHHHHHHHHCSCCTTTSCTTTTTTCCCSCHHHHHHBC
T ss_pred EEECCChHHhhccHHHHHHHHHHHHHHHHcCcccCCHHHHHHHHHHHHHHHhCCCCccccChhhccccccCCHHHHhhcC
Confidence 79999997 78899999999999999999999999999999999999999999999999999999999999999886533
Q ss_pred cchHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHhcCCCCCceeEEeecCCCCeEEEEeeccceEE-eCcc---ceeeee
Q psy9052 80 NGLLERLTDAVIQQHSALVGLSQGTAEEYYILAAQQLDGYGQETFLVKDEHGLETILGVTLKGIIV-SGTN---SSKFYK 155 (356)
Q Consensus 80 ~~~le~~~~~I~~~Hk~L~GmS~~eAe~~FL~~a~~Lp~YGv~~F~Vkd~~~~~l~LGV~~~GI~V-~~~~---~~~~f~ 155 (356)
. ..+.|.+.|.+.|++++|+++.+|+..||++|++||+||+++|.|+++.|.++||||+.+||.| +.++ +...|+
T Consensus 160 ~-~~~~~~~~I~~~~~~~~g~s~~~A~~~yL~~~~~lp~yG~~~f~v~~~~g~~~~Lgv~~~Gi~v~~~~~k~~~~~~f~ 238 (294)
T 1ef1_A 160 L-NKDQWEERIQVWHEEHRGMLREDAVLEYLKIAQDLEMYGVNYFSIKNKKGSELWLGVDALGLNIYEQNDRLTPKIGFP 238 (294)
T ss_dssp C-CHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTTSTTTTCEEEEEECTTCCEEEEEEETTEEEEEETTCSSSCSEEEE
T ss_pred C-CHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHcccCccCceEEeeecCCCCEEEEEEecCcEEEEeCCCccccceEEE
Confidence 1 1357899999999999999999999999999999999999999999999999999999999999 5443 457999
Q ss_pred cccccceeccCceEEEEEcCCCCceEEEEeCCHHHHHHHHHHHHHhhHHhhcCcc
Q psy9052 156 WAEIANVLNHKKNFGIETSNADDHIVNFVFPDVESAKYVFRMCVHQHTFYMTYEA 210 (356)
Q Consensus 156 W~~I~~lsf~~k~F~I~~~~~~~~~~~F~~~s~~~AK~Lwklcie~H~Ffr~~~~ 210 (356)
|++|.+|+|++++|+|++.+..++.+.|++++.+.||+||++|+++|+||+.+++
T Consensus 239 w~~I~~~~~~~~~f~i~~~~~~~~~~~f~~~~~~~~k~l~~l~~~~h~f~~~~r~ 293 (294)
T 1ef1_A 239 WSEIRNISFNDKKFVIKPIDKKAPDFVFYAPRLRINKRILALCMGNHELYMRRRK 293 (294)
T ss_dssp GGGEEEEEEETTEEEEEESSSSSCCEEEECSSHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred cccceEeeecCCEEEEEEccCccceEEEEeCCHHHHHHHHHHHHHHHHHHHhccC
Confidence 9999999999999999998654568999999999999999999999999998875
No 3
>1h4r_A Merlin; FERM, neurofibromatosis, NF2, structural protein, cytoskeleton, anti-oncogene; 1.8A {Homo sapiens} SCOP: a.11.2.1 b.55.1.5 d.15.1.4 PDB: 1isn_A 3u8z_A
Probab=100.00 E-value=3.3e-46 Score=359.95 Aligned_cols=209 Identities=26% Similarity=0.487 Sum_probs=192.9
Q ss_pred CcccCCCC-CCCchhHHHHHHHHHHHHHHcCcccCCHHHHHHHHHHHHHhhhCCCCCccchhhhhhhhccCCchhhhcCC
Q psy9052 1 MYYVSGIS-LITDEMTRYHCFLQLKNDIIEGRIQCNLDDAVVLASYCMQAEFGNYNSERHTLEYLKDFALFPKDLVENGH 79 (356)
Q Consensus 1 kFY~~d~~-~L~de~TR~LlYLQlr~dIl~Grlpcs~e~av~LAAL~lQae~GDy~~~~h~~~yl~~~~~lP~~i~~~~~ 79 (356)
|||++++. .+.|+.||+|+|+|+|+||++|+++|+.++|++||||++|+++|||+++.|..+|+....|+|+++++..+
T Consensus 100 kf~~~~~~~~l~~~~~~~l~y~Q~~~dil~g~~~~~~e~a~~Laal~~Qa~~Gd~~~~~~~~~~~~~~~~lP~~~~~~~~ 179 (314)
T 1h4r_A 100 KFYPENAEEELVQEITQHLFFLQVKKQILDEKIYCPPEASVLLASYAVQAKYGDYDPSVHKRGFLAQEELLPKRVINLYQ 179 (314)
T ss_dssp SSCCSSHHHHCCSHHHHHHHHHHHHHHHHTTSSCCCHHHHHHHHHHHHHHHHCSCCTTTSCTTTTTTCCCSCHHHHTTSC
T ss_pred EEecCCchhhhcCHHHHHHHHHHHHHHHhCCCccCCHHHHHHHHHHHHHHHHCCCCccccchhhcchhhcCCHHHHhhcc
Confidence 79999997 78899999999999999999999999999999999999999999999999999999999999999887532
Q ss_pred cchHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHhcCCCCCceeEEeecCCCCeEEEEeeccceEE-eCcc---ceeeee
Q psy9052 80 NGLLERLTDAVIQQHSALVGLSQGTAEEYYILAAQQLDGYGQETFLVKDEHGLETILGVTLKGIIV-SGTN---SSKFYK 155 (356)
Q Consensus 80 ~~~le~~~~~I~~~Hk~L~GmS~~eAe~~FL~~a~~Lp~YGv~~F~Vkd~~~~~l~LGV~~~GI~V-~~~~---~~~~f~ 155 (356)
. ..+.|.+.|.+.|++++|+|+.+|+.+||++|++||+||+++|.|+++.|.++||||+.+||.| +.++ +...|+
T Consensus 180 ~-~~~~~~~~I~~~~~~~~g~s~~eA~~~yL~~~~~lp~yG~~~f~v~~~~g~~~~LgI~~~Gi~v~~~~~k~~~~~~f~ 258 (314)
T 1h4r_A 180 M-TPEMWEERITAWYAEHRGRARDEAEMEYLKIAQDLEMYGVNYFAIRNKKGTELLLGVDALGLHIYDPENRLTPKISFP 258 (314)
T ss_dssp C-CHHHHHHHHHHHHHTTTTCCHHHHHHHHHHHHTTSTTTTCEEEEEEETTCCEEEEEECSSEEEEECTTCSSSCSEEEE
T ss_pred C-CHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHhccCccCceEEEeecCCCCEEEEEEeCCceEEEeCCCCcccceEEe
Confidence 1 1357899999999999999999999999999999999999999999999999999999999999 5443 357999
Q ss_pred cccccceeccCceEEEEEcCCCCceEEEEeCCHHHHHHHHHHHHHhhHHhhcCcc
Q psy9052 156 WAEIANVLNHKKNFGIETSNADDHIVNFVFPDVESAKYVFRMCVHQHTFYMTYEA 210 (356)
Q Consensus 156 W~~I~~lsf~~k~F~I~~~~~~~~~~~F~~~s~~~AK~Lwklcie~H~Ffr~~~~ 210 (356)
|++|.+|+|++++|+|++.+.....+.|++++.+.||+||++|+++|+||+.+++
T Consensus 259 w~~I~~~~~~~~~f~i~~~~~~~~~~~f~~~~~~~~k~i~~l~~~~h~f~~~~r~ 313 (314)
T 1h4r_A 259 WNEIRNISYSDKEFTIKPLDKKIDVFKFNSSKLRVNKLILQLCIGNHDLFMRRRK 313 (314)
T ss_dssp GGGEEEEEEETTEEEEEESSTTSCCEEEECCCHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred cccceEEEeeCCEEEEEEcCCCCceEEEEcCCHHHHHHHHHHHHHHHHHHHhhcC
Confidence 9999999999999999998765568999999999999999999999999998875
No 4
>2i1j_A Moesin; FERM, coiled-coil, C-ermad, ERM, radixin, ezrin, MER actin binding, masking, regulation, SELF-inhibition, cell A membrane protein; 2.10A {Spodoptera frugiperda} PDB: 2i1k_A 1e5w_A
Probab=100.00 E-value=1.3e-43 Score=368.75 Aligned_cols=211 Identities=25% Similarity=0.427 Sum_probs=193.8
Q ss_pred CcccCCCC-CCCchhHHHHHHHHHHHHHHcCcccCCHHHHHHHHHHHHHhhhCCCCCccchhhhhhhhccCCchhhhcCC
Q psy9052 1 MYYVSGIS-LITDEMTRYHCFLQLKNDIIEGRIQCNLDDAVVLASYCMQAEFGNYNSERHTLEYLKDFALFPKDLVENGH 79 (356)
Q Consensus 1 kFY~~d~~-~L~de~TR~LlYLQlr~dIl~Grlpcs~e~av~LAAL~lQae~GDy~~~~h~~~yl~~~~~lP~~i~~~~~ 79 (356)
|||++++. .+.|++|++|||+|+++||+.|++||+.++|+.||||++|+++|||+++.|..+|+....|+|.+++...+
T Consensus 83 kfy~~~~~~~l~d~~t~~LlYlQvk~dIl~G~l~c~~e~a~~LAAL~lQae~GDy~~~~~~~~yl~~~~~lP~~vl~~~~ 162 (575)
T 2i1j_A 83 KFYPEDVADELIQEITLKLFYLQVKNAILSDEIYCPPETSVLLASYAVQARHGDHNPAVHGPGFLANDRLLPQRVTDQHK 162 (575)
T ss_dssp SSCCSSHHHHCCSHHHHHHHHHHHHHHHHTTSSCCCHHHHHHHHHHHHHHHHCSCCTTTCCTTTTTTCCCSCHHHHHTBC
T ss_pred EEcCCChhhhcCCHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHhcCCChhhcccccccccccCCHHHHhhcC
Confidence 79999997 68899999999999999999999999999999999999999999999999999999999999999887532
Q ss_pred cchHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHhcCCCCCceeEEeecCCCCeEEEEeeccceEE-eCcc---ceeeee
Q psy9052 80 NGLLERLTDAVIQQHSALVGLSQGTAEEYYILAAQQLDGYGQETFLVKDEHGLETILGVTLKGIIV-SGTN---SSKFYK 155 (356)
Q Consensus 80 ~~~le~~~~~I~~~Hk~L~GmS~~eAe~~FL~~a~~Lp~YGv~~F~Vkd~~~~~l~LGV~~~GI~V-~~~~---~~~~f~ 155 (356)
. ..+.|...|...|++++|+|+.+|+..||++|++||+||+++|.|+++.|.++||||+..||.| +.++ ++..|+
T Consensus 163 ~-s~e~~~~~I~~~hk~l~G~s~~eA~~~yL~~a~~lp~YG~~~F~vkd~~g~~l~LGV~~~GI~v~~~~~k~~~l~~f~ 241 (575)
T 2i1j_A 163 M-SREEWEQSITNWWQEHRGMLREDAMMEYLKIAQDLEMYGVNYFEIRNKKNTELWLGVDALGLNIYEKDDKLTPKIGFP 241 (575)
T ss_dssp C-CHHHHHHHHHHHHGGGTTCCHHHHHHHHHHHHTTSTTTTCEEEEEECTTCCEEEEEECSSEEEEEETTCSSSCSEEEE
T ss_pred C-CHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHhccccCCEEEEEEecCCCEEEEEEcCCeeEEEeCCCCcccceEec
Confidence 1 1256899999999999999999999999999999999999999999999999999999999999 5433 457999
Q ss_pred cccccceeccCceEEEEEcCCCCceEEEEeCCHHHHHHHHHHHHHhhHHhhcCcccc
Q psy9052 156 WAEIANVLNHKKNFGIETSNADDHIVNFVFPDVESAKYVFRMCVHQHTFYMTYEATE 212 (356)
Q Consensus 156 W~~I~~lsf~~k~F~I~~~~~~~~~~~F~~~s~~~AK~Lwklcie~H~Ffr~~~~~~ 212 (356)
|++|.+|+|++++|+|.+.+..+..+.|++++.+.||+||++|+++|.||+.++.++
T Consensus 242 w~~I~~isf~~k~F~I~~~~~~~~~l~F~t~~~~~ak~i~~lc~~~H~ff~~~r~~d 298 (575)
T 2i1j_A 242 WSEIRNISFNDRKFIIKPIDKKAPDFVFFAPRVRVNKRILALCMGNHELYMRRRKPD 298 (575)
T ss_dssp GGGEEEEEEETTEEEEEESCTTSCCEEEECSCHHHHHHHHHHHHHHHHHHHHHTSCC
T ss_pred HHHhhcccCCCCeEEEEEccCCcceeEEEeCCchhHHHHHHHHHHHHHHHHHccCCC
Confidence 999999999999999999865456799999999999999999999999999887754
No 5
>1mix_A Talin; focal adhesion, integrin binding, FERM domain, cytoskeleton, structural protein; 1.75A {Gallus gallus} SCOP: a.11.2.1 b.55.1.5 PDB: 1miz_B 1mk7_B 1mk9_B 1y19_B 3g9w_A 2hrj_A 2g35_A* 2k00_A 2h7d_A* 2h7e_A* 2kgx_B
Probab=100.00 E-value=2.8e-40 Score=299.43 Aligned_cols=195 Identities=19% Similarity=0.337 Sum_probs=174.0
Q ss_pred CcccCCCC-CCCchhHHHHHHHHHHHHHHcCcccCCHHHHHHHHHHHHHhhhCCCCCccchhhhhhhhccCCchhhhcCC
Q psy9052 1 MYYVSGIS-LITDEMTRYHCFLQLKNDIIEGRIQCNLDDAVVLASYCMQAEFGNYNSERHTLEYLKDFALFPKDLVENGH 79 (356)
Q Consensus 1 kFY~~d~~-~L~de~TR~LlYLQlr~dIl~Grlpcs~e~av~LAAL~lQae~GDy~~~~h~~~yl~~~~~lP~~i~~~~~ 79 (356)
|||+.|+. .+.|+.||+|+|+|+|+||++|+++|+.++|++||||++|+++|||+++.|..+|+....|+|+++++...
T Consensus 2 kf~~~d~~~~~~d~~~~~l~y~Q~~~dil~g~~~~~~~~a~~Laal~~qa~~Gd~~~~~~~~~~~~~~~~lP~~~~~~~~ 81 (206)
T 1mix_A 2 KFFYSDQNVDSRDPVQLNLLYVQARDDILNGSHPVSFDKACEFAGYQCQIQFGPHNEQKHKPGFLELKDFLPKEYIKQKG 81 (206)
T ss_dssp CCCCCHHHHHTSCHHHHHHHHHHHHHHHHTTSSCCCHHHHHHHHHHHHHHHHCSCCTTTSCTTCSCGGGTSCGGGSTTCC
T ss_pred cccCCCCCCCcCCHHHHHHHHHHHHHHHHCCccccCHHHHHHHHHHhhhheecCCCcccccCCccchHhhCCHHHhhccc
Confidence 79998886 69999999999999999999999999999999999999999999999998989999999999999887532
Q ss_pred cchHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHhcCCCCCceeEEeecCC-C----CeEEEEeeccceEE-eCcc--ce
Q psy9052 80 NGLLERLTDAVIQQHSALVGLSQGTAEEYYILAAQQLDGYGQETFLVKDEH-G----LETILGVTLKGIIV-SGTN--SS 151 (356)
Q Consensus 80 ~~~le~~~~~I~~~Hk~L~GmS~~eAe~~FL~~a~~Lp~YGv~~F~Vkd~~-~----~~l~LGV~~~GI~V-~~~~--~~ 151 (356)
.+.|.+.|++++|+++.+|+..||++|++||+||+++|.|++.. | .++||||+.+||.+ +.++ .+
T Consensus 82 -------~~~i~~~~~~~~g~s~~~A~~~yL~~~~~l~~yG~~~f~v~~~~~g~~~~~~~~Lgi~~~Gi~~~~~~~~~~l 154 (206)
T 1mix_A 82 -------ERKIFMAHKNCGNMSEIEAKVRYVKLARSLKTYGVSFFLVKEKMKGKNKLVPRLLGITKECVMRVDEKTKEVI 154 (206)
T ss_dssp -------HHHHHHHHHHTTTCCHHHHHHHHHHHHHHSTTTTCEEEEEEECCSSCSSCEEEEEEECSSEEEEEETTTCCEE
T ss_pred -------HHHHHHHHHHccCCCHHHHHHHHHHHHHhCcccCceEEEEEEccCCCCCcCcEEEEEcccceEEeCCCCCcee
Confidence 58899999999999999999999999999999999999999874 4 69999999999999 5543 45
Q ss_pred eeeecccccceeccCceEEEEEcCCCCceEEEEeCCHHHHHHHHHHHHHhhHHh
Q psy9052 152 KFYKWAEIANVLNHKKNFGIETSNADDHIVNFVFPDVESAKYVFRMCVHQHTFY 205 (356)
Q Consensus 152 ~~f~W~~I~~lsf~~k~F~I~~~~~~~~~~~F~~~s~~~AK~Lwklcie~H~Ff 205 (356)
..|+|++|.+|++.+++|+|++.+..+.. |.|.+ ..|+.|+.+|.++|.++
T Consensus 155 ~~~~~~~I~~~~~~~~~f~i~~~~~~~~~--~~~~t-~~~~~i~~Li~~Yi~~~ 205 (206)
T 1mix_A 155 QEWSLTNIKRWAASPKSFTLDFGDYQDGY--YSVQT-TEGEQIAQLIAGYIDII 205 (206)
T ss_dssp EEEEGGGCCEEEECSSEEEEECGGGSSSC--EEEEC-SCHHHHHHHHHTTSCCC
T ss_pred eeeehhHeeecccCCCEEEEEeCcccceE--EEEEC-CcHHHHHHHHHHHHHHh
Confidence 79999999999999999999998653333 55544 35899999999998764
No 6
>4f7g_A Talin-1; alpha-helix bundle, integrin activation, cell adhesion; 2.05A {Mus musculus}
Probab=100.00 E-value=2.3e-36 Score=278.50 Aligned_cols=191 Identities=20% Similarity=0.334 Sum_probs=163.4
Q ss_pred CCchhHHHHHHHHHHHHHHcCcccCCHHHHHHHHHHHHHhhhCCCCCccchhhhhhhhccCCchhhhcCCcchHHHHHHH
Q psy9052 10 ITDEMTRYHCFLQLKNDIIEGRIQCNLDDAVVLASYCMQAEFGNYNSERHTLEYLKDFALFPKDLVENGHNGLLERLTDA 89 (356)
Q Consensus 10 L~de~TR~LlYLQlr~dIl~Grlpcs~e~av~LAAL~lQae~GDy~~~~h~~~yl~~~~~lP~~i~~~~~~~~le~~~~~ 89 (356)
..|+++++|+|+|+|+||++|+++|+.++|++||||++|+++|||+++.|..+|+....|+|++++... +++.
T Consensus 23 ~~Dp~~l~l~ylQ~~~dil~G~~~~~~e~a~~LAal~~Qae~Gd~~~~~~~~~~~~l~~~lP~~~~~~~-------~~~~ 95 (222)
T 4f7g_A 23 SRDPVQLNLLYVQARDDILNGSHPVSFDKACEFAGFQCQIQFGPHNEQKHKAGFLDLKDFLPKEYVKQK-------GERK 95 (222)
T ss_dssp ---CCHHHHHHHHHHHHHHTTSSCCCHHHHHHHHHHHHHHHHCSCCTTTSCSSCSCGGGTSCGGGGGGC-------CHHH
T ss_pred CCCHHHHHHHHHHHHHHHhCCcccCCHHHHHHHHHHHHHHHHCCCCchhcccCccchhhccCHHHHhhh-------hHHH
Confidence 458899999999999999999999999999999999999999999999898889988999999988643 3578
Q ss_pred HHHHhhhccCCCHHHHHHHHHHHHhcCCCCCceeEEeecCC-C----CeEEEEeeccceEE-eCc--cceeeeecccccc
Q psy9052 90 VIQQHSALVGLSQGTAEEYYILAAQQLDGYGQETFLVKDEH-G----LETILGVTLKGIIV-SGT--NSSKFYKWAEIAN 161 (356)
Q Consensus 90 I~~~Hk~L~GmS~~eAe~~FL~~a~~Lp~YGv~~F~Vkd~~-~----~~l~LGV~~~GI~V-~~~--~~~~~f~W~~I~~ 161 (356)
|.+.|++++|+++.+|+.+||++|++||+||+++|.|++.. | .+++|||+.+||.| +.+ ..+..|+|.+|.+
T Consensus 96 I~~~h~~~~g~s~~eA~~~yL~~~~~l~~yG~~~f~v~~~~~g~~~~~~~~LgI~~~GI~v~~~~tk~~l~~~~~~~I~~ 175 (222)
T 4f7g_A 96 IFQAHKNCGQMSEIEAKVRYVKLARSLKTYGVSFFLVKEKMKGKNKLVPRLLGITKECVMRVDEKTKEVIQEWSLTNIKR 175 (222)
T ss_dssp HHHHHHTTTTCCHHHHHHHHHHHHHTSTTTTCEEEEEEEECTTSSCEEEEEEEECSSEEEEECTTTCCEEEEEEGGGCCE
T ss_pred HHHHHHhccCCCHHHHHHHHHHHHhhccccCcEEEEEEEecCCCCCCCCEEEEEcCCcEEEEcCCCCceeEeccHHHeee
Confidence 99999999999999999999999999999999999999864 3 58999999999999 544 3578999999999
Q ss_pred eeccCceEEEEEcCCCCceEEEEeCCHHHHHHHHHHHHHhhHHhhcCcc
Q psy9052 162 VLNHKKNFGIETSNADDHIVNFVFPDVESAKYVFRMCVHQHTFYMTYEA 210 (356)
Q Consensus 162 lsf~~k~F~I~~~~~~~~~~~F~~~s~~~AK~Lwklcie~H~Ffr~~~~ 210 (356)
|++.+++|+|++.+..... |.|.+. .|+.|..++.+++..++.+|+
T Consensus 176 ~~~~~~~f~I~~~~~~~~~--~~~~T~-q~~~I~~Li~~Yi~~~~~~r~ 221 (222)
T 4f7g_A 176 WAASPKSFTLDFGDYQDGY--YSVQTT-EGEQIAQLIAGYIDIILKKKK 221 (222)
T ss_dssp EEECSSEEEEECCTTSSSC--EEEECS-CHHHHHHHHHHHHHHTC----
T ss_pred eccCCCEEEEEECCccceE--EEEECC-cHHHHHHHHHHHHHHHHHhhc
Confidence 9999999999997542223 555553 588899999999988776654
No 7
>3ivf_A Talin-1; FERM domain, cell membrane, cell projection, cytoskeleton, M phosphoprotein, cell adhesion, structural protein; 1.94A {Mus musculus} PDB: 2kma_A 2kc1_A
Probab=100.00 E-value=4.7e-34 Score=281.42 Aligned_cols=195 Identities=20% Similarity=0.336 Sum_probs=168.7
Q ss_pred CcccCCCCC-CCchhHHHHHHHHHHHHHHcCcccCCHHHHHHHHHHHHHhhhCCCCCccchhhhhhhhccCCchhhhcCC
Q psy9052 1 MYYVSGISL-ITDEMTRYHCFLQLKNDIIEGRIQCNLDDAVVLASYCMQAEFGNYNSERHTLEYLKDFALFPKDLVENGH 79 (356)
Q Consensus 1 kFY~~d~~~-L~de~TR~LlYLQlr~dIl~Grlpcs~e~av~LAAL~lQae~GDy~~~~h~~~yl~~~~~lP~~i~~~~~ 79 (356)
|||++++.. +.|+.|++|+|+|+|+||++|+++|+.++|++||||++|+++|||+++.|..+|+....|+|.+++...
T Consensus 167 Kf~~~d~~~~~~D~~~~~l~y~Q~~~dil~G~~~c~~e~a~~LAAl~~qae~Gd~~~~~~~~~~~~l~~~lP~~~~~~~- 245 (371)
T 3ivf_A 167 KFFYSDQNVDSRDPVQLNLLYVQARDDILNGSHPVSFDKACEFAGFQCQIQFGPHNEQKHKAGFLDLKDFLPKEYVKQK- 245 (371)
T ss_dssp CCCCBCSSCBTTCHHHHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHHHHCSCCTTTSCTTCSCGGGTSCGGGTTSC-
T ss_pred EEecCCccccCCCHHHHHHHHHHhhHHHhCceeecCHHHHHHHHHHHHHHHhCCCChhhcccchhcccccCCHHHhCch-
Confidence 689887754 689999999999999999999999999999999999999999999999898889888999999988642
Q ss_pred cchHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHhcCCCCCceeEEeecCC-C----CeEEEEeeccceEE-eCc--cce
Q psy9052 80 NGLLERLTDAVIQQHSALVGLSQGTAEEYYILAAQQLDGYGQETFLVKDEH-G----LETILGVTLKGIIV-SGT--NSS 151 (356)
Q Consensus 80 ~~~le~~~~~I~~~Hk~L~GmS~~eAe~~FL~~a~~Lp~YGv~~F~Vkd~~-~----~~l~LGV~~~GI~V-~~~--~~~ 151 (356)
+ ++.|.+.|++++|+|+.+|+.+||+.|++||+||+++|.|+++. | .+++||||.+||.| +.+ ..+
T Consensus 246 ----~--e~~I~~~~~~~~g~s~~eA~~~yL~~~~~l~~yG~~~f~vk~~~~g~~~~~~~~LgI~~~GI~v~~~~~k~~l 319 (371)
T 3ivf_A 246 ----G--ERKIFQAHKNCGQMSEIEAKVRYVKLARSLKTYGVSFFLVKEKMKGKNKLVPRLLGITKECVMRVDEKTKEVI 319 (371)
T ss_dssp ----H--HHHHHHHHHHTTTCCHHHHHHHHHHHHHHSTTTTCEEEEEEEECTTSSCEEEEEEEECSSEEEEEETTTCCEE
T ss_pred ----H--HHHHHHHHHHccCCCHHHHHHHHHHHHhcccccCcEEEEEEEeccCCCCCccEEEEEcCCcEEEEcCCCCceE
Confidence 1 57899999999999999999999999999999999999998653 2 37999999999999 554 356
Q ss_pred eeeecccccceeccCceEEEEEcCCCCceEEEEeCCHHHHHHHHHHHHHhhHHh
Q psy9052 152 KFYKWAEIANVLNHKKNFGIETSNADDHIVNFVFPDVESAKYVFRMCVHQHTFY 205 (356)
Q Consensus 152 ~~f~W~~I~~lsf~~k~F~I~~~~~~~~~~~F~~~s~~~AK~Lwklcie~H~Ff 205 (356)
..|+|.+|.+|++.++.|+|.+.+..+..+.|.++ .|+.+-.++.+++..+
T Consensus 320 ~~~~~~~I~~~~~~~~~f~I~~~~~~~~~~~~~T~---~~~~I~~Li~~Yi~~i 370 (371)
T 3ivf_A 320 QEWSLTNIKRWAASPKSFTLDFGDYQDGYYSVQTT---EGEQIAQLIAGYIDII 370 (371)
T ss_dssp EEEEGGGCCEEEEETTEEEEECGGGSSSCEEEECS---CHHHHHHHHHHHHHC-
T ss_pred EeeehhheeeeecCCCEEEEEECCccCcEEEEECC---hHHHHHHHHHHHHHHh
Confidence 89999999999999999999997653334555443 5677888888887654
No 8
>4dxa_B KREV interaction trapped protein 1; GTPase, FERM, protein-protein interaction, GTP binding, CYTO protein binding; HET: GSP; 1.95A {Homo sapiens} PDB: 3u7d_A
Probab=100.00 E-value=1.8e-33 Score=272.75 Aligned_cols=192 Identities=16% Similarity=0.236 Sum_probs=161.1
Q ss_pred cccCCC-CCCCchhHHHHHHHHHHHHHHcCcccCCHHHHHHHHHHHHHhhhCCCCCccchhhhhh---hhccCCchhhhc
Q psy9052 2 YYVSGI-SLITDEMTRYHCFLQLKNDIIEGRIQCNLDDAVVLASYCMQAEFGNYNSERHTLEYLK---DFALFPKDLVEN 77 (356)
Q Consensus 2 FY~~d~-~~L~de~TR~LlYLQlr~dIl~Grlpcs~e~av~LAAL~lQae~GDy~~~~h~~~yl~---~~~~lP~~i~~~ 77 (356)
||+.++ ..+.|+.||+|+|+|+|+||++|+++|+.++|++||||++|+++|||+++.|..+|++ ...|+|.++++.
T Consensus 99 f~~~~~~~~~~d~~t~~l~y~Q~~~dil~G~~~c~~e~a~~LAAl~~q~e~Gd~~~~~~~~~~l~~~~l~~~lP~~~~~~ 178 (322)
T 4dxa_B 99 RLPLEVEKQIEDPLAILILFDEARYNLLKGFYTAPDAKLITLASLLLQIVYGNYESKKHKQGFLNEENLKSIVPVTKLKS 178 (322)
T ss_dssp TCCHHHHTTCCCHHHHHHHHHHHHHHHHHTCCCCCHHHHHHHHHHHHHHHHCSCCHHHHSSSCSCHHHHTTTSCTTTTTT
T ss_pred cccccccccccCHHHHHHHHHHHHHHHHCCcccCCHHHHHHHHHHHHHHHhCCCCcccccccccchhhhhhhCCHHHHhc
Confidence 445354 4688999999999999999999999999999999999999999999999888888875 368999998875
Q ss_pred CCcchHHHHHHHHHHHhhhc---cCCCHH--HHHHHHHHHHhcCCCCCceeEEeec--------CCCCeEEEEeeccceE
Q psy9052 78 GHNGLLERLTDAVIQQHSAL---VGLSQG--TAEEYYILAAQQLDGYGQETFLVKD--------EHGLETILGVTLKGII 144 (356)
Q Consensus 78 ~~~~~le~~~~~I~~~Hk~L---~GmS~~--eAe~~FL~~a~~Lp~YGv~~F~Vkd--------~~~~~l~LGV~~~GI~ 144 (356)
.. +.|++.|.+.|+++ +|++++ +|+.+||++|++||+||+++|.|+. ..+.++|||||.+||.
T Consensus 179 ~~----~~~~~~I~~~h~~~~~~~g~s~~~a~a~~~yL~~~~~lp~yG~~~f~v~~~~~~~g~~~~~~~~~LgV~~~Gv~ 254 (322)
T 4dxa_B 179 KA----PHWTNRILHEYKNLSTSEGVSKEMHHLQRMFLQNCWEIPTYGAAFFTGQIFTKASPSNHKVIPVYVGVNIKGLH 254 (322)
T ss_dssp TG----GGSHHHHHHHHHHHHC--CCCCCHHHHHHHHHHHHHTSTTTTCEEEEEEEECC-------EEEEEEEECSSEEE
T ss_pred CH----HHHHHHHHHHHHhcccccCCChhHHHHHHHHHHHHhcCCCcCeEEEEEEEeccCCCCccCCCeEEEEEccCceE
Confidence 32 34789999999999 999975 5699999999999999999999984 2245999999999999
Q ss_pred E-eCc--cceeeeeccccccee--ccCceEEEEEcCCCCceEEEEeCCH-HHHHHHHHHHH
Q psy9052 145 V-SGT--NSSKFYKWAEIANVL--NHKKNFGIETSNADDHIVNFVFPDV-ESAKYVFRMCV 199 (356)
Q Consensus 145 V-~~~--~~~~~f~W~~I~~ls--f~~k~F~I~~~~~~~~~~~F~~~s~-~~AK~Lwklci 199 (356)
| +.+ ..+..++|.+|. |+ +.+++|+|.+.+. +..+.|.++.. +.|+.|..+|.
T Consensus 255 v~~~~tk~~l~~~~~~~is-w~~s~~~~~f~i~~~~~-~~~~~~~t~q~~~i~~li~~~~~ 313 (322)
T 4dxa_B 255 LLNMETKALLISLKYGCFM-WQLGDTDTCFQIHSMEN-KMSFIVHTKQAGLVVKLLMKLNG 313 (322)
T ss_dssp EEETTTCCEEEEEETTSEE-EEECSSTTEEEEEESSS-CCEEEEECTTHHHHHHHHHHHHH
T ss_pred EEcCCCceeeeccccceeE-EeecCCCCEEEEEECCC-CccEEEEeCcHHHHHHHHHHHHH
Confidence 9 554 357889999997 87 7788999999754 34677777766 68888888774
No 9
>2al6_A Focal adhesion kinase 1; transferase; 2.35A {Gallus gallus} SCOP: a.11.2.1 b.55.1.5 d.15.1.4 PDB: 2j0m_A* 2aeh_A
Probab=99.97 E-value=5.1e-31 Score=260.90 Aligned_cols=205 Identities=16% Similarity=0.209 Sum_probs=172.2
Q ss_pred CcccCCCCC--CCchhHHHHHHHHHHHHHHcCc-ccCCHHHHHHHHHHHHHhhhCCCCCccc----hhhhhhh----hcc
Q psy9052 1 MYYVSGISL--ITDEMTRYHCFLQLKNDIIEGR-IQCNLDDAVVLASYCMQAEFGNYNSERH----TLEYLKD----FAL 69 (356)
Q Consensus 1 kFY~~d~~~--L~de~TR~LlYLQlr~dIl~Gr-lpcs~e~av~LAAL~lQae~GDy~~~~h----~~~yl~~----~~~ 69 (356)
|||++++.. ..|+.|+++||+|+|+||++|+ ++|+.++|+.||||++|+++|||++..+ ..+|+.. ..|
T Consensus 97 rF~~~~~~~l~~~D~~t~~~~y~Q~r~Dil~g~~~~~~~e~al~LAaL~~q~~~gD~~~~~~~~k~~~~~l~k~~~l~~f 176 (375)
T 2al6_A 97 RYLPKGFLNQFTEDKPTLNFFYQQVKNDYMLEIADQVDQEIALKLGCLEIRRSYGEMRGNALEKKSNYEVLEKDVGLRRF 176 (375)
T ss_dssp CCCCTTHHHHHTTCHHHHHHHHHHHHHHHHHHTTTTSCHHHHHHHHHHHHHHHTTTSCTTGGGSHHHHHHHHHTTCGGGT
T ss_pred EEecCCHHHhhhcCHHHHHHHHHHHHHHHHcCCCccCCHHHHHHHHHHHHHHHhhhccchhhcccCCHHHhhhcccHHHh
Confidence 799999853 4588999999999999999999 7899999999999999999999975422 3355543 489
Q ss_pred CCchhhhcCCcchHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHhcCCCCCceeEEeecCCC----CeEEEEeeccceEE
Q psy9052 70 FPKDLVENGHNGLLERLTDAVIQQHSALVGLSQGTAEEYYILAAQQLDGYGQETFLVKDEHG----LETILGVTLKGIIV 145 (356)
Q Consensus 70 lP~~i~~~~~~~~le~~~~~I~~~Hk~L~GmS~~eAe~~FL~~a~~Lp~YGv~~F~Vkd~~~----~~l~LGV~~~GI~V 145 (356)
+|+.++...+. +.|.+.|...|+++.|+++.+|+..||++|++||+||+++|.|+...+ ..++||++. ||.+
T Consensus 177 lP~~~~~~~~~---~~~~k~I~~~~k~~~g~s~~eAk~~yL~~~~~l~~yG~~~F~v~~~~~~~~~~~l~lg~~~-GI~~ 252 (375)
T 2al6_A 177 FPKSLLDSVKA---KTLRKLIQQTFRQFANLNREESILKFFEILSPVYRFDKECFKCALGSSWIISVELAIGPEE-GISY 252 (375)
T ss_dssp SCHHHHHSSCH---HHHHHHHHHHHHTTTTCCHHHHHHHHHHHHTTTCCCSCEEEEEEECSSSCEEEEEEEETTT-EEEE
T ss_pred CCHHHHHHhCh---HHHHHHHHHHHHHhhCCCHHHHHHHHHHHHhhcccCCcEEEEEeecCCCCcceEEEEecCC-CEEE
Confidence 99999876543 567899999999999999999999999999999999999999998754 577888864 9999
Q ss_pred -eC--ccceeeeecccccceecc-------CceEEEEEcCCCCceEEEEeCCHHHHHHHHHHHHHhhHHhhcCcc
Q psy9052 146 -SG--TNSSKFYKWAEIANVLNH-------KKNFGIETSNADDHIVNFVFPDVESAKYVFRMCVHQHTFYMTYEA 210 (356)
Q Consensus 146 -~~--~~~~~~f~W~~I~~lsf~-------~k~F~I~~~~~~~~~~~F~~~s~~~AK~Lwklcie~H~Ffr~~~~ 210 (356)
.. ......++|.+|.+|++. ++.|+|.+.+. .+.+.|.|++.+.|+.+..||.+++..+...+.
T Consensus 253 ~~~~~~~~~~~~~f~~I~~i~~~~~~~~~~~~~~~I~v~~~-~~~~~f~~~t~~~a~~i~~Li~gY~rl~~~~~~ 326 (375)
T 2al6_A 253 LTDKGANPTHLADFNQVQTIQYSNSEDKDRKGMLQLKIAGA-PEPLTVTAPSLTIAENMADLIDGYCRLVNGATQ 326 (375)
T ss_dssp ESSTTSCEEEEECGGGEEEEEEECCSSSCCCEEEEEEETTC-SSCEEEEESSHHHHHHHHHHHHHHHHHHHTCSS
T ss_pred EeCCCCceEEEechhHccEEEEEeccccCCceEEEEEECCC-CCcEEEEeCCHHHHHHHHHHHhhheEEecCCCc
Confidence 33 345688999999999652 24677776543 368999999999999999999999999886544
No 10
>3pvl_A Myosin VIIA isoform 1; protein complex, novel folding, protein cargo binding, cargo proteins, motor protein-protein transport complex; 2.80A {Mus musculus}
Probab=99.97 E-value=1.9e-30 Score=273.52 Aligned_cols=195 Identities=14% Similarity=0.137 Sum_probs=168.6
Q ss_pred CcccCCCCCCCchhHHHHHHHHHHHHHHcCcccCCHH-HHHHHHHHHHHhhhCCCCCccchhhhhhhhccCCchhhhcCC
Q psy9052 1 MYYVSGISLITDEMTRYHCFLQLKNDIIEGRIQCNLD-DAVVLASYCMQAEFGNYNSERHTLEYLKDFALFPKDLVENGH 79 (356)
Q Consensus 1 kFY~~d~~~L~de~TR~LlYLQlr~dIl~Grlpcs~e-~av~LAAL~lQae~GDy~~~~h~~~yl~~~~~lP~~i~~~~~ 79 (356)
|||++....+.|+++++|+|+|+++||++|+++|+.+ ++++||||++|+++|||++..+....+ ..|+|..++....
T Consensus 355 kff~p~~~~~~d~it~~LlYlQ~k~dIl~Grlpc~~E~~a~~LAAl~~Qae~Gd~~~~~~~~~~L--~~~lP~~~l~~~~ 432 (655)
T 3pvl_A 355 EVFTPWHNPSEDNVATNLIYQQVVRGVKFGEYRCEKEDDLAELASQQYFVDYGSEMILERLLSLV--PTYIPDREITPLK 432 (655)
T ss_dssp CCCCTTCCGGGCHHHHHHHHHHHHHHHHHTSSCCSSHHHHHHHHHHHHHHHHTTCCCHHHHHHHH--HHHSCGGGCCSSS
T ss_pred EEecCCcccccCHHHHHHHHHHHhcccccCccCCChHHHHHHHHHHHHHHHhCCCcchhhHHHHH--HHhCCHHHHhccC
Confidence 6898877788999999999999999999999999955 999999999999999998755443333 4689999876531
Q ss_pred cchHHHHHHHHHHHhhhc----cCCCHHHHHHHHHHHH-hcCCCCCceeEEeecCCC-----CeEEEEeeccceEE-eCc
Q psy9052 80 NGLLERLTDAVIQQHSAL----VGLSQGTAEEYYILAA-QQLDGYGQETFLVKDEHG-----LETILGVTLKGIIV-SGT 148 (356)
Q Consensus 80 ~~~le~~~~~I~~~Hk~L----~GmS~~eAe~~FL~~a-~~Lp~YGv~~F~Vkd~~~-----~~l~LGV~~~GI~V-~~~ 148 (356)
..+.|.+.|...|+++ +|+++.+|+.+||+.| ++||+||++||.|++..| .++|||||..||.| +.+
T Consensus 433 --~~~~w~~~I~~~hkk~~~~~~g~s~~eAk~~yL~~a~~~lp~YG~~fF~vk~~~g~~lp~~~l~LgVn~~GV~v~d~~ 510 (655)
T 3pvl_A 433 --NLEKWAQLAIAAHKKGIYAQRRTDSQKVKEDVVNYARFKWPLLFSRFYEAYKFSGPPLPKSDVIVAVNWTGVYFVDEQ 510 (655)
T ss_dssp --CHHHHHHHHHHHHHHHHHTTCSSCHHHHHHHHHHHHHHHCTTTSCEEEEEEEEESSCCSCSEEEEEEETTEEEEECTT
T ss_pred --CHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhccccCcEEEEEEecCCCCCCCccEEEEEcCCceEEEcCC
Confidence 2377999999999999 9999999999999999 899999999999998766 58999999999999 554
Q ss_pred c-ceeeeecccccceeccC------ceEEEEEcCCCCceEEEEeCCHHHHHHHHHHHHHh
Q psy9052 149 N-SSKFYKWAEIANVLNHK------KNFGIETSNADDHIVNFVFPDVESAKYVFRMCVHQ 201 (356)
Q Consensus 149 ~-~~~~f~W~~I~~lsf~~------k~F~I~~~~~~~~~~~F~~~s~~~AK~Lwklcie~ 201 (356)
+ .+..|+|.+|.+|++++ ++|+|.... +....|.+++...++.||+.+++-
T Consensus 511 ~k~ll~f~~~eI~~is~~~~~~~~~~~ftl~~~~--~~~~~F~T~~a~~I~~LI~~yi~~ 568 (655)
T 3pvl_A 511 EQVLLELSFPEIMAVSSSRGTKMMAPSFTLATIK--GDEYTFTSSNAEDIRDLVVTFLEG 568 (655)
T ss_dssp CCEEEEEEGGGEEEEEEECCCSSSCCEEEEEETT--SCEEEEECTTHHHHHHHHHHHHHH
T ss_pred CceEEEechhHceEEeccCcccccccEEEEEecc--CceEEEEcCCHHHHHHHHHHHHHH
Confidence 4 35689999999999987 689998653 357889999999999999998875
No 11
>3au4_A Myosin-X; protein-protein complex, motor protein cargo transportation, protein-apoptosis complex; 1.90A {Homo sapiens} PDB: 3au5_A 3pzd_A
Probab=99.96 E-value=1.8e-28 Score=253.34 Aligned_cols=202 Identities=16% Similarity=0.238 Sum_probs=162.8
Q ss_pred CcccCCCCCCCchhHHHHHHHHHHHHHHcCcccCCHHHHHHHHHHHHHhhhCCCCCccchhhhhhhhccCCchhhhc---
Q psy9052 1 MYYVSGISLITDEMTRYHCFLQLKNDIIEGRIQCNLDDAVVLASYCMQAEFGNYNSERHTLEYLKDFALFPKDLVEN--- 77 (356)
Q Consensus 1 kFY~~d~~~L~de~TR~LlYLQlr~dIl~Grlpcs~e~av~LAAL~lQae~GDy~~~~h~~~yl~~~~~lP~~i~~~--- 77 (356)
+||++....+.|+++++|+|+|+++||++|+++|+.+++++||||++|+++|||++.... .....|+|..+++.
T Consensus 306 ~ff~~~~~~~~d~~~~~lly~Q~~~dil~G~~~~~~e~a~~LAAl~lQ~~~GD~~~~~~~---~~l~~~lP~~~l~~~~~ 382 (555)
T 3au4_A 306 YCFLDTDNVPKDSVEFAFMFEQAHEAVIHGHHPAPEENLQVLAALRLQYLQGDYTLHAAI---PPLEEVYSLQRLKARIS 382 (555)
T ss_dssp EECSCCTTCCTTSHHHHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHHHHCSCCTTCCC---CCGGGTSCCHHHHHHHH
T ss_pred EeecCcccCCcchHHHHhhHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHcCCCccccch---hhhhhhCCHHHhhhhhc
Confidence 477765566778999999999999999999999999999999999999999999975432 12357899975532
Q ss_pred ----------C--------C---cch-----HHHHHHHHHHHhhhccCCCHHHHHHHHHHHHhcCCCCCceeEEeecCCC
Q psy9052 78 ----------G--------H---NGL-----LERLTDAVIQQHSALVGLSQGTAEEYYILAAQQLDGYGQETFLVKDEHG 131 (356)
Q Consensus 78 ----------~--------~---~~~-----le~~~~~I~~~Hk~L~GmS~~eAe~~FL~~a~~Lp~YGv~~F~Vkd~~~ 131 (356)
+ . .+. .+.+.+.|.+.|++++|+++.+|+..||++|++||+||+++|.|+++.+
T Consensus 383 ~~~k~~s~~~~~l~~~~~~~~~~~~~W~~~~~~~~~~~I~~~~~~~~g~s~~eA~~~yL~~~~~lp~yG~~~F~v~~~~~ 462 (555)
T 3au4_A 383 QSTKTFSFRTGSVVRQKVEEEQMLDMWIKEEVSSARASIIDKWRKFQGMNQEQAMAKYMALIKEWPGYGSTLFDVECKEG 462 (555)
T ss_dssp HTTCCEECCTTSCCEECCCCHHHHHHHTHHHHHHHHHHHHHHHHTTTTCCHHHHHHHHHHHHTTSTTTTCEEEEEEEEES
T ss_pred cccccccccccccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhCCCcCceEEEEEecCC
Confidence 0 0 000 1345788999999999999999999999999999999999999998755
Q ss_pred ---CeEEEEeeccceEE-eCcc--ceeeeeccccccee-ccCceEEEEEcCCCCceEEEEeCCHHHHHHHHHHHHHhhHH
Q psy9052 132 ---LETILGVTLKGIIV-SGTN--SSKFYKWAEIANVL-NHKKNFGIETSNADDHIVNFVFPDVESAKYVFRMCVHQHTF 204 (356)
Q Consensus 132 ---~~l~LGV~~~GI~V-~~~~--~~~~f~W~~I~~ls-f~~k~F~I~~~~~~~~~~~F~~~s~~~AK~Lwklcie~H~F 204 (356)
..+||||+.+||.| +.++ .+.+|+|.+|.+|+ +.+++|+|.+.+ +. |.|.+ ..|..+..++.+++..
T Consensus 463 ~~~~~l~LgV~~~GI~v~~~~~k~~l~~~~~~~I~~~~~~~~~~f~i~~~~---~~--l~f~T-~qa~~i~~LI~~Yi~~ 536 (555)
T 3au4_A 463 GFPQELWLGVSADAVSVYKRGEGRPLEVFQYEHILSFGAPLANTYKIVVDE---RE--LLFET-SEVVDVAKLMKAYISM 536 (555)
T ss_dssp SSCSEEEEEECSSEEEEEETTCSSCSEEEEGGGEEEEEEEETTEEEEEETT---EE--EEEEC-TTHHHHHHHHHHHHHH
T ss_pred CCCceEEEEEcccceEEECCCCCeeEEEEEhhheeeecCCCCCEEEEEECC---cE--EEEEC-CCHHHHHHHHHHHHHH
Confidence 69999999999999 5543 46799999999998 478999999873 34 44444 3566777888888887
Q ss_pred hhcCccc
Q psy9052 205 YMTYEAT 211 (356)
Q Consensus 205 fr~~~~~ 211 (356)
++.++..
T Consensus 537 l~~~r~~ 543 (555)
T 3au4_A 537 IVKKRYS 543 (555)
T ss_dssp HHHHHCC
T ss_pred HHHhhhc
Confidence 7766553
No 12
>4eku_A Protein-tyrosine kinase 2-beta; proline-rich tyrosine kinase 2, FERM domain, transferase; 3.25A {Homo sapiens}
Probab=99.94 E-value=1.3e-25 Score=224.03 Aligned_cols=204 Identities=14% Similarity=0.150 Sum_probs=164.8
Q ss_pred CcccCCCCC-C-CchhHHHHHHHHHHHHHHcCc-ccCCHHHHHHHHHHHHHhhhCCCCCcc----chhhhhh----hhcc
Q psy9052 1 MYYVSGISL-I-TDEMTRYHCFLQLKNDIIEGR-IQCNLDDAVVLASYCMQAEFGNYNSER----HTLEYLK----DFAL 69 (356)
Q Consensus 1 kFY~~d~~~-L-~de~TR~LlYLQlr~dIl~Gr-lpcs~e~av~LAAL~lQae~GDy~~~~----h~~~yl~----~~~~ 69 (356)
||||+|+.. + .|+.+.++||+|+|.|+++|. ++|+.++|++||||.+|+++||+.... ....++. ...|
T Consensus 117 rF~p~d~~~l~~~D~~~~~ylY~Q~r~D~l~g~~~~~~~e~al~LAaL~~q~~~gd~~~~a~~~k~~~~~l~k~~~lk~f 196 (392)
T 4eku_A 117 RYLPEDFMESLKEDRTTLLYFYQQLRNDYMQRYASKVSEGMALQLGCLELRRFFKDMPHNALDKKSNFELLEKEVGLDLF 196 (392)
T ss_dssp CSCCTTTHHHHTTCHHHHHHHHHHHHHHHHHHTTTTSCHHHHHHHHHHHHHHHTTTSCTTGGGSHHHHHHHHHHTCGGGT
T ss_pred EEEcCCHHHhhhcChHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHhhhcchhhhccCCCHHHHhhhccHHHh
Confidence 799999854 4 467777899999999999998 789999999999999999999997532 2333433 3579
Q ss_pred CCchhhhcCCcchHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHhcCCCCCceeEEeecCC--CCeEEEEeeccceEE-e
Q psy9052 70 FPKDLVENGHNGLLERLTDAVIQQHSALVGLSQGTAEEYYILAAQQLDGYGQETFLVKDEH--GLETILGVTLKGIIV-S 146 (356)
Q Consensus 70 lP~~i~~~~~~~~le~~~~~I~~~Hk~L~GmS~~eAe~~FL~~a~~Lp~YGv~~F~Vkd~~--~~~l~LGV~~~GI~V-~ 146 (356)
+|+.++..... +.+...|...|+++.|+++.+|+..||+.+++||+||+++|.|+... +.+++|.|+++||.+ .
T Consensus 197 lP~~l~~~ik~---k~~rk~I~~~~kk~~~ls~~eakl~YL~~l~~Lp~yG~e~F~vk~~s~~~~~~~L~Vg~~GIs~~~ 273 (392)
T 4eku_A 197 FPKQMQENLKP---KQFRKMIQQTFQQYASLREEECVMKFFNTLAGFANIDQETYRCELIQGWNITVDLVIGPKGIRQLT 273 (392)
T ss_dssp SCHHHHHHSCH---HHHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTSSCCSCEEEEEEEESSSCCCEEEEEETTEEEEEC
T ss_pred cCHHHHhhcCH---HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhhhccCcEEEEEEeccCCcceeEEEEcCCcEEEEC
Confidence 99998775443 46788999999999999999999999999999999999999998643 356777777789999 4
Q ss_pred Cc--cceeeeecccccceeccC---c--eEEEEEcCCCCceEEEEeCCHHHHHHHHHHHHHhhHHhhcC
Q psy9052 147 GT--NSSKFYKWAEIANVLNHK---K--NFGIETSNADDHIVNFVFPDVESAKYVFRMCVHQHTFYMTY 208 (356)
Q Consensus 147 ~~--~~~~~f~W~~I~~lsf~~---k--~F~I~~~~~~~~~~~F~~~s~~~AK~Lwklcie~H~Ffr~~ 208 (356)
.+ .....++|.+|.+|+... + .|.|...+. .+.+.|.|++...|+.++.|+.++...+...
T Consensus 274 ~k~~~~~~~~~f~~I~~Is~~~~s~~~~~v~I~~~~~-~~~l~~~~~s~~~A~~~~~LidGY~RL~~d~ 341 (392)
T 4eku_A 274 SQDAKPTCLAEFKQIRSIRCLPLEEGQAVLQLGIEGA-PQALSIKTSSLAEAENMADLIDGYCRLQGEH 341 (392)
T ss_dssp SSCSCCEEEECGGGBCCCCEEEETTTEEEEEECBTTC-SSCEEEEESCHHHHHHHHHHHHHHHHHHSSS
T ss_pred CCCCceeEEechHHceEEEEEeccCCceEEEEEECCC-CcceEEEeCCHHHHHHHHHHHHHHHhhccCC
Confidence 33 367899999999996532 3 455544433 3479999999999999999999997776543
No 13
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=99.85 E-value=3.3e-20 Score=194.84 Aligned_cols=201 Identities=15% Similarity=0.216 Sum_probs=163.0
Q ss_pred CcccCCCCCC--CchhHHHHHHHHHHHHHHcCccc-CCHHHHHHHHHHHHHhhhCCCCCc----cchhhhhhh----hcc
Q psy9052 1 MYYVSGISLI--TDEMTRYHCFLQLKNDIIEGRIQ-CNLDDAVVLASYCMQAEFGNYNSE----RHTLEYLKD----FAL 69 (356)
Q Consensus 1 kFY~~d~~~L--~de~TR~LlYLQlr~dIl~Grlp-cs~e~av~LAAL~lQae~GDy~~~----~h~~~yl~~----~~~ 69 (356)
||||+|+..| .|..|+++||+|+|.|+++|+++ |+.++|+.||+|.+|++|||++.. ....+++.. ..|
T Consensus 97 rf~p~~~~~l~~~d~~~~~ylf~Q~r~D~~~~~~~~~~~~~al~La~l~~~~~~~d~~~~a~~~~~~~~~~~k~~~~~~f 176 (656)
T 2j0j_A 97 RYLPKGFLNQFTEDKPTLNFFYQQVKNDYMLEIADQVDQEIALKLGCLEIRRSYGEMRGNALEKKSNYEVLEKDVGLRRF 176 (656)
T ss_dssp CCCCTTHHHHHHTCHHHHHHHHHHHHHHHHHHTGGGSCHHHHHHHHHHHHHHHTTTSCTTGGGSHHHHHHHHHTTTGGGT
T ss_pred EEcCCCHHHHHhccHHHHHHHHHHHHHHHHhcccccccHhHHHHHHHHHHHHHhhhccchhhhcCCCHHHHHhhccHHHh
Confidence 7999999866 56779999999999999999996 899999999999999999999543 112233322 479
Q ss_pred CCchhhhcCCcchHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHhcCCCCCceeEEeecCCCCe--EEEEeecc-ceEE-
Q psy9052 70 FPKDLVENGHNGLLERLTDAVIQQHSALVGLSQGTAEEYYILAAQQLDGYGQETFLVKDEHGLE--TILGVTLK-GIIV- 145 (356)
Q Consensus 70 lP~~i~~~~~~~~le~~~~~I~~~Hk~L~GmS~~eAe~~FL~~a~~Lp~YGv~~F~Vkd~~~~~--l~LGV~~~-GI~V- 145 (356)
+|+.++...+. +.+...|.+.|+++.|+++.+|+..||+.++.+++||++.|.|++..|.. +-|.|+++ ||..
T Consensus 177 iP~~~~~~~~~---~~~~k~i~~~~k~~~~~~~~~~~lk~l~~l~~~~~yg~e~f~~~~~~g~~~~~~l~vg~~~GI~~~ 253 (656)
T 2j0j_A 177 FPKSLLDSVKA---KTLRKLIQQTFRQFANLNREESILKFFEILSPVYRFDKECFKCALGSSWIISVELAIGPEEGISYL 253 (656)
T ss_dssp SCHHHHHHSCH---HHHHHHHHHHHGGGTTCCHHHHHHHHHHHHGGGCCTTSEEEEEEEESSSEEEEEEEEETTTEEEEC
T ss_pred CCHHHHHHhhh---hHHHHHHHHHHHHHhcCCHHHHHHHHHHHhccccccCceEEeeccCCCCcccEEEEECCCCCeEEE
Confidence 99998876553 45688999999999999999999999999999999999999999987744 66667776 9998
Q ss_pred eC--ccceeeeecccccceecc----C---ceEEEEEcCCCCceEEEEeCCHHHHHHHHHHHHHhhHHh
Q psy9052 146 SG--TNSSKFYKWAEIANVLNH----K---KNFGIETSNADDHIVNFVFPDVESAKYVFRMCVHQHTFY 205 (356)
Q Consensus 146 ~~--~~~~~~f~W~~I~~lsf~----~---k~F~I~~~~~~~~~~~F~~~s~~~AK~Lwklcie~H~Ff 205 (356)
.. ........|++|..|... + +.+.+.+... .+.+.+.+++...|+.+..+|-++....
T Consensus 254 ~~~~~~~~~~~~f~~I~~I~~~~~~~~~~k~~~~~~~~~~-~~~l~i~~~s~~~ae~~a~LidGy~rL~ 321 (656)
T 2j0j_A 254 TDKGANPTHLADFNQVQTIQYSNSEDKDRKGMLQLKIAGA-PEPLTVTAPSLTIAENMADLIDGYCRLV 321 (656)
T ss_dssp CSSSSCCEEEECGGGEEEBCEEECSSSSCCEEEEEEESSC-SSCEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCceecccccceeEEEEeeccccCCcceEEEEeccC-CcceEEECCCchhhHHHHHhhcceeeee
Confidence 22 345678999999999665 2 3455555433 4678999999999999999998864443
No 14
>1hbk_A ACBP, acyl-COA binding protein; fatty acid metabolism; HET: COA MYR; 2.0A {Plasmodium falciparum} SCOP: a.11.1.1
Probab=97.24 E-value=0.0021 Score=50.95 Aligned_cols=80 Identities=16% Similarity=0.151 Sum_probs=58.6
Q ss_pred HHHHHHHHHcCc--ccCCHHHHHHHHHHHHHhhhCCCCCccchhhhhhhhccCCchhhhcCCcchHHHHHHHHHHHhhhc
Q psy9052 20 FLQLKNDIIEGR--IQCNLDDAVVLASYCMQAEFGNYNSERHTLEYLKDFALFPKDLVENGHNGLLERLTDAVIQQHSAL 97 (356)
Q Consensus 20 YLQlr~dIl~Gr--lpcs~e~av~LAAL~lQae~GDy~~~~h~~~yl~~~~~lP~~i~~~~~~~~le~~~~~I~~~Hk~L 97 (356)
|..+...|-.-. ...+.++-.+|=||--||..||++..++. .+. + ..+.=-..|+++
T Consensus 6 F~~A~~~v~~l~~~~~~~~~~~L~LYalyKQAt~Gd~~~~~Pg--~~d--------~-----------~~~aKw~AW~~l 64 (89)
T 1hbk_A 6 FEECVSFINGLPRTINLPNELKLDLYKYYKQSTIGNCNIKEPS--AHK--------Y-----------IDRKKYEAWKSV 64 (89)
T ss_dssp HHHHHHHHHHSCTTCCCCHHHHHHHHHHHHHHHTCSCCSCCCC--TTS--------H-----------HHHHHHHHHHHT
T ss_pred HHHHHHHHHhcCCcCCCCHHHHHHHHHHHHHhhcCCCCCCCCC--ccC--------H-----------HhHHHHHHHHHh
Confidence 666666666544 55789999999999999999999754321 111 1 112234689999
Q ss_pred cCCCHHHHHHHHHHHHhc-CCCCC
Q psy9052 98 VGLSQGTAEEYYILAAQQ-LDGYG 120 (356)
Q Consensus 98 ~GmS~~eAe~~FL~~a~~-Lp~YG 120 (356)
.|||+++|+..|++++.+ .|.||
T Consensus 65 ~gms~eeA~~~YI~~v~~l~~~~~ 88 (89)
T 1hbk_A 65 ENLNREDAQKRYVDIVSEIFPYWQ 88 (89)
T ss_dssp TTCCHHHHHHHHHHHHHHHCTTTT
T ss_pred cCCCHHHHHHHHHHHHHHHccccc
Confidence 999999999999999976 55555
No 15
>3epy_A Acyl-COA-binding domain-containing protein 7; acyl-COA binding protein, fatty acid, lipid metabolism, structural genomics; HET: COA PLM; 2.00A {Homo sapiens} SCOP: a.11.1.1
Probab=97.16 E-value=0.0011 Score=52.69 Aligned_cols=81 Identities=23% Similarity=0.229 Sum_probs=60.0
Q ss_pred HHHHHHHHHHcCcccCCHHHHHHHHHHHHHhhhCCCCCccchhhhhhhhccCCchhhhcCCcchHHHHHHHHHHHhhhcc
Q psy9052 19 CFLQLKNDIIEGRIQCNLDDAVVLASYCMQAEFGNYNSERHTLEYLKDFALFPKDLVENGHNGLLERLTDAVIQQHSALV 98 (356)
Q Consensus 19 lYLQlr~dIl~Grlpcs~e~av~LAAL~lQae~GDy~~~~h~~~yl~~~~~lP~~i~~~~~~~~le~~~~~I~~~Hk~L~ 98 (356)
-|.++...|-.-.-..+.++-.+|=||--||..||++..++ +.+. + ....=-+.|+++.
T Consensus 7 ~F~~A~~~vk~l~~~p~~~~~L~lYalyKQAt~Gd~~~~~P--g~~d--------~-----------~~~aKw~AW~~l~ 65 (89)
T 3epy_A 7 DFDRAAEDVRKLKARPDDGELKELYGLYKQAIVGDINIACP--GMLD--------L-----------KGKAKWEAWNLKK 65 (89)
T ss_dssp HHHHHHHHGGGCSSCCCHHHHHHHHHHHHHHHTCSCCSCCT--TTTC--------H-----------HHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHcCCCcCHHHHHHHHHHHHHHhhCCCCCCCC--cccc--------h-----------HHHHHHHHHHHhh
Confidence 47778888876555678899999999999999999985432 2121 0 1122235799999
Q ss_pred CCCHHHHHHHHHHHHhc-CCCCC
Q psy9052 99 GLSQGTAEEYYILAAQQ-LDGYG 120 (356)
Q Consensus 99 GmS~~eAe~~FL~~a~~-Lp~YG 120 (356)
|||+++|+..|++.+.+ .|.||
T Consensus 66 g~s~eeA~~~Yi~~v~~l~~ky~ 88 (89)
T 3epy_A 66 GLSTEDATSAYISKAKELIEKYG 88 (89)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHHHHhhhhc
Confidence 99999999999999976 45555
No 16
>2cb8_A Acyl-COA-binding protein; acyl-coenzyme A binding protein, fatty acid, acetylation, alternative splicing, lipid-binding, transport; HET: MYA; 1.4A {Homo sapiens} PDB: 2fj9_A 1aca_A* 1hb6_A 1hb8_A 1nti_A 1nvl_A* 2abd_A 2fdq_A
Probab=96.94 E-value=0.0037 Score=49.39 Aligned_cols=80 Identities=21% Similarity=0.284 Sum_probs=57.6
Q ss_pred HHHHHHHHHcCcccCCHHHHHHHHHHHHHhhhCCCCCccchhhhhhhhccCCchhhhcCCcchHHHHHHHHHHHhhhccC
Q psy9052 20 FLQLKNDIIEGRIQCNLDDAVVLASYCMQAEFGNYNSERHTLEYLKDFALFPKDLVENGHNGLLERLTDAVIQQHSALVG 99 (356)
Q Consensus 20 YLQlr~dIl~Grlpcs~e~av~LAAL~lQae~GDy~~~~h~~~yl~~~~~lP~~i~~~~~~~~le~~~~~I~~~Hk~L~G 99 (356)
|.++...|-.-.-..+.++-..|=||--||..||++...+ +.+. + ..+.=-+.|+++.|
T Consensus 6 F~~A~~~vk~l~~~~~~~~~L~lYalyKQAt~Gd~~~~~P--g~~d--------~-----------~~~aKw~AW~~l~g 64 (87)
T 2cb8_A 6 FEKAAEEVRHLKTKPSDEEMLFIYGHYKQATVGDINTERP--GMLD--------F-----------TGKAKWDAWNELKG 64 (87)
T ss_dssp HHHHHHHGGGCSSCCCHHHHHHHHHHHHHHHTCSCCSCCC--CTTC--------H-----------HHHHHHHHHHTTTT
T ss_pred HHHHHHHHHHccCCcCHHHHHHHHHHHHhhhhCCCCCCCC--Cccc--------H-----------HHHHHHHHHHHcCC
Confidence 6666666664444567899999999999999999985432 2111 1 11223468999999
Q ss_pred CCHHHHHHHHHHHHhc-CCCCC
Q psy9052 100 LSQGTAEEYYILAAQQ-LDGYG 120 (356)
Q Consensus 100 mS~~eAe~~FL~~a~~-Lp~YG 120 (356)
||+++|+..|++++.+ ++.||
T Consensus 65 ms~eeA~~~Yi~~v~~l~~~~~ 86 (87)
T 2cb8_A 65 TSKEDAMKAYINKVEELKKKYG 86 (87)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999976 44444
No 17
>2lbb_A Acyl COA binding protein; protein binding, structural genomi seattle structural genomics center for infectious disease,; NMR {Babesia bovis}
Probab=96.86 E-value=0.0019 Score=52.02 Aligned_cols=80 Identities=21% Similarity=0.283 Sum_probs=58.3
Q ss_pred HHHHHHHHHcCc-ccCCHHHHHHHHHHHHHhhhCCCCCccchhhhhhhhccCCchhhhcCCcchHHHHHHHHHHHhhhcc
Q psy9052 20 FLQLKNDIIEGR-IQCNLDDAVVLASYCMQAEFGNYNSERHTLEYLKDFALFPKDLVENGHNGLLERLTDAVIQQHSALV 98 (356)
Q Consensus 20 YLQlr~dIl~Gr-lpcs~e~av~LAAL~lQae~GDy~~~~h~~~yl~~~~~lP~~i~~~~~~~~le~~~~~I~~~Hk~L~ 98 (356)
|.++...|-.-. ...+.++-.+|=||--||..||++..++ +.+. + ..+.=-+.|+++.
T Consensus 14 F~~A~~~vk~l~~~~ps~~~~L~LYaLyKQAt~Gd~~~~~P--g~~d--------~-----------~graKw~AW~~l~ 72 (96)
T 2lbb_A 14 FDAAVKYVSNTTTMMASNDDKLCFYKYYKQATVGDCNKPKP--GMLQ--------L-----------QEKYKWEAWNALR 72 (96)
T ss_dssp HHHHHHHHHHCCCSCCCTTTTTHHHHHHHHTTTSSCCCCCC--CSSC--------S-----------HHHHHHHHHHHTT
T ss_pred HHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhcCCCCCCCC--Cccc--------H-----------HhHHHHHHHHHhc
Confidence 666777776433 4567889999999999999999985432 2221 1 1122346899999
Q ss_pred CCCHHHHHHHHHHHHhc-CCCCC
Q psy9052 99 GLSQGTAEEYYILAAQQ-LDGYG 120 (356)
Q Consensus 99 GmS~~eAe~~FL~~a~~-Lp~YG 120 (356)
|||+++|+..||+++.+ .|.||
T Consensus 73 gmS~eeAm~~YI~lv~~l~~~~~ 95 (96)
T 2lbb_A 73 GMSTESAKEAYVKLLDTLAPSWR 95 (96)
T ss_dssp TCCHHHHHHHHHHHHHHHCGGGT
T ss_pred CCCHHHHHHHHHHHHHHHhchhc
Confidence 99999999999999976 55554
No 18
>1st7_A ACBP, acyl-COA-binding protein; four helix bundle, transport protein; NMR {Saccharomyces cerevisiae}
Probab=96.84 E-value=0.0037 Score=49.23 Aligned_cols=75 Identities=23% Similarity=0.232 Sum_probs=54.8
Q ss_pred HHHHHHHHHcCcccCCHHHHHHHHHHHHHhhhCCCCCccchhhhhhhhccCCchhhhcCCcchHHHHHHHHHHHhhhccC
Q psy9052 20 FLQLKNDIIEGRIQCNLDDAVVLASYCMQAEFGNYNSERHTLEYLKDFALFPKDLVENGHNGLLERLTDAVIQQHSALVG 99 (356)
Q Consensus 20 YLQlr~dIl~Grlpcs~e~av~LAAL~lQae~GDy~~~~h~~~yl~~~~~lP~~i~~~~~~~~le~~~~~I~~~Hk~L~G 99 (356)
|..+...|-.-.-..+.++-.+|=||--||..||++..++. .+. + ..+.=-..|+++.|
T Consensus 5 F~~A~~~v~~l~~~~~~~~~L~lYalyKQAt~Gd~~~~~Pg--~~d--------~-----------~~raKw~AW~~l~g 63 (86)
T 1st7_A 5 FEEKAKAVNELPTKPSTDELLELYALYKQATVGDNDKEKPG--IFN--------M-----------KDRYKWEAWENLKG 63 (86)
T ss_dssp HHHHHHHHTSCSSCCCHHHHHHHHHHHHHHHHCSCCCCCCC--SSC--------H-----------HHHHHHHHHHTTTT
T ss_pred HHHHHHHHHHccCCcCHHHHHHHHHHHHHHhhCCCCCCCCC--ccC--------H-----------HHHHHHHHHHHcCC
Confidence 56666666644444678999999999999999999853321 111 1 11223468999999
Q ss_pred CCHHHHHHHHHHHHhc
Q psy9052 100 LSQGTAEEYYILAAQQ 115 (356)
Q Consensus 100 mS~~eAe~~FL~~a~~ 115 (356)
||+++|+..||+++.+
T Consensus 64 ms~eeA~~~YI~~v~~ 79 (86)
T 1st7_A 64 KSQEDAEKEYIALVDQ 79 (86)
T ss_dssp THHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHH
Confidence 9999999999999976
No 19
>2cop_A Acyl-coenzyme A binding domain containing 6; acyl COA binding protein, COA binding protein, lipid binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.74 E-value=0.0053 Score=50.51 Aligned_cols=82 Identities=16% Similarity=0.168 Sum_probs=60.8
Q ss_pred HHHHHHHHHHcCcccCCHHHHHHHHHHHHHhhhCCCCCccchhhhhhhhccCCchhhhcCCcchHHHHHHHHHHHhhhcc
Q psy9052 19 CFLQLKNDIIEGRIQCNLDDAVVLASYCMQAEFGNYNSERHTLEYLKDFALFPKDLVENGHNGLLERLTDAVIQQHSALV 98 (356)
Q Consensus 19 lYLQlr~dIl~Grlpcs~e~av~LAAL~lQae~GDy~~~~h~~~yl~~~~~lP~~i~~~~~~~~le~~~~~I~~~Hk~L~ 98 (356)
-|.++...|-.-.-..+.++-++|=||--||..||++..++ +.+. + ....=-..|++|.
T Consensus 11 ~F~~A~~~vk~l~~~p~~~~~L~LYaLyKQAt~Gd~~~~~P--g~~d--------~-----------~~raKw~AW~~l~ 69 (109)
T 2cop_A 11 LFEKAAAHLQGLIQVASREQLLYLYARYKQVKVGNCNTPKP--SFFD--------F-----------EGKQKWEAWKALG 69 (109)
T ss_dssp HHHHHHHHHTTSTTTSCHHHHHHHHHHHHHHHTCSCCSCCC--CSSC--------H-----------HHHHHHHHHHSCT
T ss_pred HHHHHHHHHHHcccCCCHHHHHHHHHHHHHhhcCCCCCCCC--CccC--------H-----------HHHHHHHHHHHhc
Confidence 47777777775555568899999999999999999985432 1111 1 1122346899999
Q ss_pred CCCHHHHHHHHHHHHhc-CCCCCc
Q psy9052 99 GLSQGTAEEYYILAAQQ-LDGYGQ 121 (356)
Q Consensus 99 GmS~~eAe~~FL~~a~~-Lp~YGv 121 (356)
|||+++|+..||+++.+ .|.|+.
T Consensus 70 gms~eeAm~~YI~lv~~l~~~~~~ 93 (109)
T 2cop_A 70 DSSPSQAMQEYIAVVKKLDPGWNP 93 (109)
T ss_dssp TCCHHHHHHHHHHHHHHHCTTCCC
T ss_pred CCCHHHHHHHHHHHHHHHhhhhcc
Confidence 99999999999999986 566664
No 20
>2wh5_A Acyl-COA-binding domain-containing protein 4; alternative splicing, fatty acid metabolism, lipid transport, lipid binding protein; HET: STE ST9 COA; 2.60A {Homo sapiens}
Probab=96.53 E-value=0.011 Score=48.47 Aligned_cols=77 Identities=18% Similarity=0.191 Sum_probs=55.8
Q ss_pred HHHHHHHHHHc----CcccCCHHHHHHHHHHHHHhhhCCCCCccchhhhhhhhccCCchhhhcCCcchHHHHHHHHHHHh
Q psy9052 19 CFLQLKNDIIE----GRIQCNLDDAVVLASYCMQAEFGNYNSERHTLEYLKDFALFPKDLVENGHNGLLERLTDAVIQQH 94 (356)
Q Consensus 19 lYLQlr~dIl~----Grlpcs~e~av~LAAL~lQae~GDy~~~~h~~~yl~~~~~lP~~i~~~~~~~~le~~~~~I~~~H 94 (356)
-|.++...|.. |....+.++-++|=||--||..||++..++ +.+. + ..+.=-..|
T Consensus 11 ~F~~A~~~vk~l~~~g~~~ps~e~~L~LYaLyKQAt~Gd~~~~~P--g~~d--------~-----------~~~aKw~AW 69 (106)
T 2wh5_A 11 QFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQATMGPCLVPRP--GFWD--------P-----------IGRYKWDAW 69 (106)
T ss_dssp HHHHHHHHHHHSCSSCSCCCCHHHHHHHHHHHHHHHHCSCCSCCC--CTTC--------H-----------HHHHHHHHH
T ss_pred HHHHHHHHHHhccccCCCCCCHHHHHHHHHHHhhhccCCCCCCCC--Cccc--------H-----------HHHHHHHHH
Confidence 35666666543 445678999999999999999999975432 1111 1 112224679
Q ss_pred hhccCCCHHHHHHHHHHHHhcC
Q psy9052 95 SALVGLSQGTAEEYYILAAQQL 116 (356)
Q Consensus 95 k~L~GmS~~eAe~~FL~~a~~L 116 (356)
+++.|||+++|+..|++++.+|
T Consensus 70 ~~l~gms~eeA~~~YI~~v~~l 91 (106)
T 2wh5_A 70 NSLGKMSREEAMSAYITEMKLV 91 (106)
T ss_dssp HTTTTCCHHHHHHHHHHHHHHH
T ss_pred HHhcCCCHHHHHHHHHHHHHHH
Confidence 9999999999999999999764
No 21
>2cqu_A Peroxisomal D3,D2-enoyl-COA isomerase; acyl-COA binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.38 E-value=0.011 Score=49.18 Aligned_cols=81 Identities=17% Similarity=0.110 Sum_probs=57.9
Q ss_pred HHHHHHHHHHcCcccCCHHHHHHHHHHHHHhhhCCCCCccchhhhhhhhccCCchhhhcCCcchHHHHHHHHHHHhhhcc
Q psy9052 19 CFLQLKNDIIEGRIQCNLDDAVVLASYCMQAEFGNYNSERHTLEYLKDFALFPKDLVENGHNGLLERLTDAVIQQHSALV 98 (356)
Q Consensus 19 lYLQlr~dIl~Grlpcs~e~av~LAAL~lQae~GDy~~~~h~~~yl~~~~~lP~~i~~~~~~~~le~~~~~I~~~Hk~L~ 98 (356)
-|.++...|-.-.-..+.++-++|=||.-||..||++..++ +.+. + ..+.=-+.|++|.
T Consensus 19 ~F~~A~~~vk~l~~~p~~~~~L~LYaLyKQAt~Gd~~~~~P--g~~d--------~-----------~graKw~AW~~l~ 77 (116)
T 2cqu_A 19 DFENSMNQVKLLKKDPGNEVKLKLYALYKQATEGPCNMPKP--GVFD--------L-----------INKAKWDAWNALG 77 (116)
T ss_dssp HHHHHHHHHHHCCSCCCHHHHHHHHHHHTTTTTCSCCSCCC--CTTC--------H-----------HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHccCCCCHHHHHHHHHHHHHHhcCCCCCCCC--Cccc--------H-----------HHHHHHHHHHHhc
Confidence 46677777664333457889999999999999999974332 1111 1 1122346799999
Q ss_pred CCCHHHHHHHHHHHHhc-CCCCC
Q psy9052 99 GLSQGTAEEYYILAAQQ-LDGYG 120 (356)
Q Consensus 99 GmS~~eAe~~FL~~a~~-Lp~YG 120 (356)
||++++|+..||+++.+ +|.|+
T Consensus 78 gms~eeAm~~YI~lv~~l~~~~~ 100 (116)
T 2cqu_A 78 SLPKEAARQNYVDLVSSLSPSLE 100 (116)
T ss_dssp SCCHHHHHHHHHHHHHHHCSCCC
T ss_pred CCCHHHHHHHHHHHHHHHccccc
Confidence 99999999999999976 45554
No 22
>3fp5_A Acyl-COA binding protein; ACBP, cacao disease, fatty acid metabolism, lipid binding protein; HET: MES; 1.61A {Moniliophthora perniciosa} SCOP: a.11.1.0
Probab=96.09 E-value=0.027 Score=46.09 Aligned_cols=75 Identities=20% Similarity=0.249 Sum_probs=54.5
Q ss_pred HHHHHHHHHc----CcccCCHHHHHHHHHHHHHhhhCCCCCccchhhhhhhhccCCchhhhcCCcchHHHHHHHHHHHhh
Q psy9052 20 FLQLKNDIIE----GRIQCNLDDAVVLASYCMQAEFGNYNSERHTLEYLKDFALFPKDLVENGHNGLLERLTDAVIQQHS 95 (356)
Q Consensus 20 YLQlr~dIl~----Grlpcs~e~av~LAAL~lQae~GDy~~~~h~~~yl~~~~~lP~~i~~~~~~~~le~~~~~I~~~Hk 95 (356)
|.++...|-. |....+.++-..|=||--||..||++...+ +.+. + ....=-..|+
T Consensus 8 F~~A~~~vk~l~~~g~~~ps~~~~L~LYalyKQAt~Gd~~~~~P--g~~d--------~-----------~~raKw~AW~ 66 (106)
T 3fp5_A 8 FDKAVEIVQSLPKDGPIKPTQDEQLYFYKYFKQATVGDVNISRP--GLMD--------F-----------TGKAKWDAWK 66 (106)
T ss_dssp HHHHHHHHHHCCSSSSSCCCHHHHHHHHHHHHHHHTCSCCSCCC--CTTC--------H-----------HHHHHHHHHH
T ss_pred HHHHHHHHHhcccccCCCCCHHHHHHHHHHHHHHhcCCCCCCCC--Cccc--------h-----------HHHHHHHHHH
Confidence 5566666643 335678999999999999999999975432 1111 0 1122235899
Q ss_pred hccCCCHHHHHHHHHHHHhc
Q psy9052 96 ALVGLSQGTAEEYYILAAQQ 115 (356)
Q Consensus 96 ~L~GmS~~eAe~~FL~~a~~ 115 (356)
++.|||+++|+..|++.+.+
T Consensus 67 ~l~gmS~eeA~~~YI~~v~~ 86 (106)
T 3fp5_A 67 SVEGTSKEVAYQKYVEKLLE 86 (106)
T ss_dssp TTTTCCHHHHHHHHHHHHHH
T ss_pred HccCCCHHHHHHHHHHHHHH
Confidence 99999999999999999975
No 23
>3flv_A Acyl-COA-binding domain-containing protein 5; lipid binding, structural genomics, struct genomics consortium, SGC, lipid-binding, membrane; HET: STE COA; 1.70A {Homo sapiens}
Probab=96.03 E-value=0.023 Score=47.40 Aligned_cols=81 Identities=16% Similarity=0.132 Sum_probs=57.2
Q ss_pred HHHHHHHHHHc----CcccCCHHHHHHHHHHHHHhhhCCCCCccchhhhhhhhccCCchhhhcCCcchHHHHHHHHHHHh
Q psy9052 19 CFLQLKNDIIE----GRIQCNLDDAVVLASYCMQAEFGNYNSERHTLEYLKDFALFPKDLVENGHNGLLERLTDAVIQQH 94 (356)
Q Consensus 19 lYLQlr~dIl~----Grlpcs~e~av~LAAL~lQae~GDy~~~~h~~~yl~~~~~lP~~i~~~~~~~~le~~~~~I~~~H 94 (356)
-|.++...|.. |....+.++-..|=||--||..||++..++ +.+. + ....=-..|
T Consensus 27 ~F~~A~~~Vk~l~~~g~~~ps~d~~L~LYaLyKQAT~Gd~~~~~P--g~~d--------~-----------~graKw~AW 85 (119)
T 3flv_A 27 RFEAAVKVIQSLPKNGSFQPTNEMMLKFYSFYKQATEGPCKLSRP--GFWD--------P-----------IGRYKWDAW 85 (119)
T ss_dssp HHHHHHHHHHHHHHHSSCCCCHHHHHHHHHHHHHHHTCSCCSCCC--CTTC--------H-----------HHHHHHHHH
T ss_pred HHHHHHHHHHhCcccCCCCCCHHHHHHHHHHHHHHhcCCCCCCCC--CccC--------H-----------HHHHHHHHH
Confidence 35555555543 555678999999999999999999975432 1111 0 112223589
Q ss_pred hhccCCCHHHHHHHHHHHHhc-CCCCC
Q psy9052 95 SALVGLSQGTAEEYYILAAQQ-LDGYG 120 (356)
Q Consensus 95 k~L~GmS~~eAe~~FL~~a~~-Lp~YG 120 (356)
+++.|||+++|+..|++++.+ ++.|+
T Consensus 86 ~~l~gmS~eeAm~~YI~~v~~l~~~~~ 112 (119)
T 3flv_A 86 SSLGDMTKEEAMIAYVEEMKKIIETMP 112 (119)
T ss_dssp HHTTTCCHHHHHHHHHHHHHHHHHHSC
T ss_pred HHccCCCHHHHHHHHHHHHHHHHhhCC
Confidence 999999999999999999976 44444
No 24
>4dx8_A Integrin beta-1-binding protein 1; protein-protien complex, PTB domain, nudix fold, protein-Pro interaction, membrane, nucleus, protein binding; 2.54A {Homo sapiens} PDB: 4dx9_A
Probab=78.63 E-value=25 Score=30.29 Aligned_cols=87 Identities=22% Similarity=0.214 Sum_probs=56.1
Q ss_pred HHHHHHHHhcCCCCCceeEEeecCCCCeEEEEeeccceEE-eCc--cceeeeeccccc-ceeccCce------EEEEEcC
Q psy9052 106 EEYYILAAQQLDGYGQETFLVKDEHGLETILGVTLKGIIV-SGT--NSSKFYKWAEIA-NVLNHKKN------FGIETSN 175 (356)
Q Consensus 106 e~~FL~~a~~Lp~YGv~~F~Vkd~~~~~l~LGV~~~GI~V-~~~--~~~~~f~W~~I~-~lsf~~k~------F~I~~~~ 175 (356)
...||+.++++...- |.... ..++++|+..||.| +.+ ..+...|..+|. -++|.+.- |.++..+
T Consensus 42 ll~~ID~aQq~gkLP---~~~~~---Edvi~svSkyGvkl~~~d~~dvl~RipL~~I~~~v~YdDg~g~g~~vla~KT~~ 115 (154)
T 4dx8_A 42 LINYIDVAQQDGKLP---FVPPE---EEFIMGVSKYGIKVSTSDQYDVLHRHALYLIIRMVCYDDGLGAGKSLLALKTTD 115 (154)
T ss_dssp HHHHHHHHHHTTSSC---SSCCS---CCEEEEEETTEEEEEETTSCCEEEEEEGGGEEEEEEEECCSSSCCEEEEEEEEC
T ss_pred HHHHHHHHHHhCcCC---CCCCc---CeEEEEEeccCcEEEeccCcccccchhHHHhhhheeeccccccccEEEEEEecC
Confidence 457888887643222 11122 25999999999999 544 456889999998 55664332 4556553
Q ss_pred CCCc---eEEEEeCCHHHHHHHHHHH
Q psy9052 176 ADDH---IVNFVFPDVESAKYVFRMC 198 (356)
Q Consensus 176 ~~~~---~~~F~~~s~~~AK~Lwklc 198 (356)
.+.+ -..|.|.+...|+.|=++.
T Consensus 116 ~~~~~~~~hv~Qc~s~~~A~~iC~~l 141 (154)
T 4dx8_A 116 ASNEEYSLWVYQCNSLEQAQAICKVL 141 (154)
T ss_dssp TTSCCEEEEEEEESSHHHHHHHHHHH
T ss_pred CCCceEEEEEEEcCCHHHHHHHHHHH
Confidence 3222 3688899988777765554
No 25
>1xr0_B FGFR signalling adaptor SNT-1; phosphotyrosine binding domain, PTB, TRK, NPXPY motif,, signaling protein/growth factor receptor complex; NMR {Homo sapiens} SCOP: b.55.1.2
Probab=78.02 E-value=25 Score=29.39 Aligned_cols=66 Identities=14% Similarity=0.118 Sum_probs=49.5
Q ss_pred CCeEEEEeeccceEE-eCccceeeeecccccceeccCceEEEEEcCCCC---ceEEEEeCCHHHHHHHHH
Q psy9052 131 GLETILGVTLKGIIV-SGTNSSKFYKWAEIANVLNHKKNFGIETSNADD---HIVNFVFPDVESAKYVFR 196 (356)
Q Consensus 131 ~~~l~LGV~~~GI~V-~~~~~~~~f~W~~I~~lsf~~k~F~I~~~~~~~---~~~~F~~~s~~~AK~Lwk 196 (356)
-.+.+|-|+...|.+ ..+.....|||..|.+..+.++.|.++...... -...|.+.....--.++.
T Consensus 26 ~g~~~L~lt~~~L~L~~~~~~~~~Wp~~~LRrYG~d~~~FsFEaGRRC~tGeGiF~F~t~~~~~If~~l~ 95 (129)
T 1xr0_B 26 LGSGIMELTDTELILYTRKRDSVKWHYLCLRRYGYDSNLFSFESGRRCQTGQGIFAFKCARAEELFNMLQ 95 (129)
T ss_dssp CCCEEEEECSSCEEEEETTTEEEEECSTTEEEEEECSSEEEEEECSCSTTCSEEEEEECSCHHHHHHHHH
T ss_pred ceeEEEEEecCEEEEEeCCCCeeEcchHHhhhcCccCCEEEEEcCCCCCCCCcEEEEEcCCHHHHHHHHH
Confidence 368999999999999 656667899999999999999999999875432 245666665544333333
No 26
>3so6_A LDL receptor adaptor protein; PTB, endocytic adaptor, autosomal reces hypercholesterolemia, ARH, cholesterol; 1.37A {Rattus norvegicus}
Probab=72.58 E-value=23 Score=28.67 Aligned_cols=68 Identities=16% Similarity=0.127 Sum_probs=47.1
Q ss_pred CCCeEEEEeeccceEE-eCcc--ceeeeecccccceecc---CceEEEEEcCCCCce---EEEEeCCHHHHHHHHHH
Q psy9052 130 HGLETILGVTLKGIIV-SGTN--SSKFYKWAEIANVLNH---KKNFGIETSNADDHI---VNFVFPDVESAKYVFRM 197 (356)
Q Consensus 130 ~~~~l~LGV~~~GI~V-~~~~--~~~~f~W~~I~~lsf~---~k~F~I~~~~~~~~~---~~F~~~s~~~AK~Lwkl 197 (356)
...+++|-|+.+||.+ +.++ .+..++...|.-++.. .+.|-...+...... ..|.+.+...|+.|-..
T Consensus 42 ~~~~v~L~Vs~~gi~l~d~~~~~~~~~~~i~~Isf~~~d~~~~~~FafI~r~~~~~~~~CHvF~c~~~~~A~~i~~~ 118 (137)
T 3so6_A 42 KLQKVTLKVSPRGIILTDSLTSQLIENVSIYRISYCTADKMHDKVFAYIAQSQQNESLECHAFLCTKRKVAQAVTLT 118 (137)
T ss_dssp CCEEEEEEEETTEEEEEETTTCCEEEEEEGGGEEEEEECSSSTTEEEEEEECSSSSCEEEEEEECSSHHHHHHHHHH
T ss_pred CCCEEEEEEeCCeEEEEECCCCcEEEeeccCEEEEEEecCCCCCEEEEEEEcCCCCeEEEEEEEeCCHHHHHHHHHH
Confidence 4568999999999999 6543 4577887787766654 357887776543222 57888887666665543
No 27
>1p5t_A DOK1, docking protein 1; signaling protein; 2.35A {Mus musculus} SCOP: b.55.1.2 PDB: 1uef_A*
Probab=71.26 E-value=34 Score=28.45 Aligned_cols=58 Identities=14% Similarity=0.111 Sum_probs=44.8
Q ss_pred CeEEEEeeccceEE-eC------ccceeeeecccccceeccCceEEEEEcCCC---CceEEEEeCCHH
Q psy9052 132 LETILGVTLKGIIV-SG------TNSSKFYKWAEIANVLNHKKNFGIETSNAD---DHIVNFVFPDVE 189 (356)
Q Consensus 132 ~~l~LGV~~~GI~V-~~------~~~~~~f~W~~I~~lsf~~k~F~I~~~~~~---~~~~~F~~~s~~ 189 (356)
.+.+|-|+..+|.+ .. ...+..|||.-|.+..+.++.|.++..... .-...|.+....
T Consensus 25 G~y~L~vt~~~l~L~~~~~~~~~~~~l~~Wp~~~LRryG~d~~~FsFEaGRrC~tGeG~f~F~t~~~~ 92 (127)
T 1p5t_A 25 GSYILRVEAEKLTLLTLGAQSQILEPLLFWPYTLLRRYGRDKVMFSFEAGRRCPSGPGTFTFQTSQGN 92 (127)
T ss_dssp SEEEEEECSSEEEEEEECTTTCSEEEEEEEEGGGEEEEEECSSEEEEEECTTSTTCSEEEEEECSCHH
T ss_pred ccEEEEEcCCEEEEEecCcccCCCcceEEEehHHhhhcCccCCEEEEEecCCCCCCCcEEEEEeCCHH
Confidence 48999999999999 42 124578999999999999999999997542 234667766654
No 28
>1j0w_A Downstream of tyrosine kinase 5; beta strands, ALFA helix, transferase; 2.50A {Homo sapiens} SCOP: b.55.1.2
Probab=70.92 E-value=36 Score=27.19 Aligned_cols=59 Identities=15% Similarity=0.059 Sum_probs=46.7
Q ss_pred CCeEEEEeeccceEE-eCc---cceeeeecccccceeccCceEEEEEcCCCC---ceEEEEeCCHH
Q psy9052 131 GLETILGVTLKGIIV-SGT---NSSKFYKWAEIANVLNHKKNFGIETSNADD---HIVNFVFPDVE 189 (356)
Q Consensus 131 ~~~l~LGV~~~GI~V-~~~---~~~~~f~W~~I~~lsf~~k~F~I~~~~~~~---~~~~F~~~s~~ 189 (356)
..+.+|=|+..+|.+ +.. ..+..|||..|.+.++.++.|.++...... -...|.+....
T Consensus 20 ~G~~~L~l~~~~l~L~~~~~~~~~l~~Wp~~~LRRyG~~~~~FsFEaGRrC~tG~G~f~F~~~~~~ 85 (103)
T 1j0w_A 20 HGECALQITYEYICLWDVQNPRVKLISWPLSALRRYGRDTTWFTFEAGRMCETGEGLFIFQTRDGE 85 (103)
T ss_dssp CEEEEEEECSSEEEEEESSSTTBEEEEEEGGGEEEEEECSSEEEEEECSSSSSCSEEEEEECSCHH
T ss_pred CccEEEEECCCEEEEEecCCCCcceEEeeHHHHhhcCccCCEEEEEeCCCCCCCCcEEEEEcCCHH
Confidence 468899999999999 543 357899999999999999999999875422 35677777664
No 29
>2v76_A Docking protein 1; alternative splicing, protein-binding, PTB domain, phosphorylation, adaptor protein; HET: PGE; 1.60A {Homo sapiens}
Probab=70.42 E-value=35 Score=27.43 Aligned_cols=58 Identities=10% Similarity=0.064 Sum_probs=44.4
Q ss_pred CeEEEEeeccceEE-eC----c--cceeeeecccccceeccCceEEEEEcCCC---CceEEEEeCCHH
Q psy9052 132 LETILGVTLKGIIV-SG----T--NSSKFYKWAEIANVLNHKKNFGIETSNAD---DHIVNFVFPDVE 189 (356)
Q Consensus 132 ~~l~LGV~~~GI~V-~~----~--~~~~~f~W~~I~~lsf~~k~F~I~~~~~~---~~~~~F~~~s~~ 189 (356)
.+.+|-|....|.+ .. . ..+..|||..|.+..+.++.|.++..... .-...|.+....
T Consensus 23 G~y~L~v~~~~l~L~~~~~~~~~~~~~~~Wp~~~LRryG~d~~~FsFEaGRrc~tG~G~f~F~~~~~~ 90 (107)
T 2v76_A 23 GSYVLRVEAERLTLLTVGAQSQILEPLLSWPYTLLRRYGRDKVMFSFEAGRRCPSGPGTFTFQTAQGN 90 (107)
T ss_dssp SEEEEEECSSEEEEEEEC----CEEEEEEEEGGGEEEEEECSSEEEEEECTTSTTCSEEEEEECSCHH
T ss_pred ccEEEEEcCCEEEEEecCccCCCCceeEEEEhHHhhhcCccCCEEEEEecCCCCCCCcEEEEEeCCHH
Confidence 38999999999999 42 1 24578999999999999999999987532 235677777664
No 30
>1aqc_A X11; PTB domain; 2.30A {Homo sapiens} SCOP: b.55.1.2 PDB: 1x11_A*
Probab=68.27 E-value=25 Score=30.28 Aligned_cols=46 Identities=11% Similarity=-0.051 Sum_probs=36.4
Q ss_pred CCeEEEEeeccceEE-eCc--cceeeeecccccceeccCceEEEEEcCC
Q psy9052 131 GLETILGVTLKGIIV-SGT--NSSKFYKWAEIANVLNHKKNFGIETSNA 176 (356)
Q Consensus 131 ~~~l~LGV~~~GI~V-~~~--~~~~~f~W~~I~~lsf~~k~F~I~~~~~ 176 (356)
+.++.|-|+.+||.| +.+ ..+..++...|.-+.-.++.|....+..
T Consensus 63 ~~~V~L~IS~~gikv~d~~t~~il~~~~l~~ISf~aD~~~~FayIar~~ 111 (172)
T 1aqc_A 63 MTEVDLFILTQRIKVLNADTQETMMDHPLRTISYIADIGNIVVLMARRR 111 (172)
T ss_dssp -CEEEEEECSSEEEEEETTTCCEEEEEEGGGEEEEEEETTEEEEEECCC
T ss_pred CcEEEEEEECCeEEEEeCCCCceEeccccceEEEEeeCCcEEEEEecCC
Confidence 578999999999999 654 3568888888888877777888877653
No 31
>1qqg_A IRS-1, insulin receptor substrate 1; beta-sandwhich, signal transduction; 2.30A {Homo sapiens} SCOP: b.55.1.2 b.55.1.2 PDB: 1irs_A*
Probab=67.14 E-value=26 Score=32.25 Aligned_cols=70 Identities=14% Similarity=0.007 Sum_probs=56.2
Q ss_pred CeEEEEeeccceEE-eC--ccceeeeecccccceeccCceEEEEEcCCC---CceEEEEeCCHHHHHHHHHHHHHh
Q psy9052 132 LETILGVTLKGIIV-SG--TNSSKFYKWAEIANVLNHKKNFGIETSNAD---DHIVNFVFPDVESAKYVFRMCVHQ 201 (356)
Q Consensus 132 ~~l~LGV~~~GI~V-~~--~~~~~~f~W~~I~~lsf~~k~F~I~~~~~~---~~~~~F~~~s~~~AK~Lwklcie~ 201 (356)
.+..|-++.+.|.+ .. ..++..||+..|...+..+..|.|+..... .-.+.|.+++...|+.+...+.+-
T Consensus 178 G~y~l~l~~~~l~L~~~~~~~~~~~wpl~~lRr~G~~~~~F~fEaGR~c~~G~G~f~f~t~~~~i~~~i~~~i~~~ 253 (264)
T 1qqg_A 178 GIYRLCLTSKTISFVKLNSEAAAVVLQLMNIRRCGHSENFFFIEVGRSAVTGPGEFWMQVDDSVVAQNMHETILEA 253 (264)
T ss_dssp EEEEEEECSSEEEEEETTCSSCSEEEEGGGEEEEEEETTEEEEEECTTSTTCSEEEEEECSCHHHHHHHHHHHHHH
T ss_pred CceEEEEeCcEEEEEecCCCcceEEeehhheecccccCcEEEEEecCCCCCCCcEEEEecCcHHHHHHHHHHHHHH
Confidence 57889999999999 43 346789999999999999999999997532 236788888888888888877644
No 32
>2kuq_A Fibroblast growth factor receptor substrate 3, LI residue peptide from ALK tyrosine...; chimera, SNT-2, PTB domain, HALK, structural genomics; NMR {Homo sapiens} PDB: 2yt2_A
Probab=66.56 E-value=62 Score=27.77 Aligned_cols=70 Identities=9% Similarity=0.083 Sum_probs=50.5
Q ss_pred CeEEEEeeccceEE-eCccceeeeecccccceeccCceEEEEEcCCC--C-ceEEEEeCCHHHHHHHHHHHHHh
Q psy9052 132 LETILGVTLKGIIV-SGTNSSKFYKWAEIANVLNHKKNFGIETSNAD--D-HIVNFVFPDVESAKYVFRMCVHQ 201 (356)
Q Consensus 132 ~~l~LGV~~~GI~V-~~~~~~~~f~W~~I~~lsf~~k~F~I~~~~~~--~-~~~~F~~~s~~~AK~Lwklcie~ 201 (356)
.+.+|-|+...|.+ ..+.....|||..|.+..+.++.|.++..... + -...|.+...+.--.++...+..
T Consensus 34 G~~~L~lt~~~L~L~~~~~~~~~WPy~~LRRYG~d~~~FsFEaGRRC~tGeGiF~F~t~~~e~If~~l~~~iq~ 107 (153)
T 2kuq_A 34 GSGVMELTQSELVLHLHRREAVRWPYLCLRRYGYDSNLFSFESGRRCQTGQGIFAFKCSRAEEIFNLLQDLMQC 107 (153)
T ss_dssp EEEEEEECSSCEEEECSSSCCEEECGGGEEEEEEETTEEEEEECTTSTTCSEEEEEECTTHHHHHHHHHHHHHS
T ss_pred eeEEEEEcCCEEEEEeCCCCceEccHHHhhhcCccCCEEEEECCCCCCCCCcEEEEEcCCHHHHHHHHHHHHhc
Confidence 57899999999999 55555679999999999999999999987542 2 24566666555444444444433
No 33
>2kup_A Fibroblast growth factor receptor substrate 3; complex, SNT-2, PTB domain, HALK, structural genomics, signa protein, NPPSFA; NMR {Homo sapiens} PDB: 2ys5_A
Probab=62.85 E-value=49 Score=28.23 Aligned_cols=58 Identities=10% Similarity=0.123 Sum_probs=44.8
Q ss_pred CeEEEEeeccceEE-eCccceeeeecccccceeccCceEEEEEcCCC--C-ceEEEEeCCHH
Q psy9052 132 LETILGVTLKGIIV-SGTNSSKFYKWAEIANVLNHKKNFGIETSNAD--D-HIVNFVFPDVE 189 (356)
Q Consensus 132 ~~l~LGV~~~GI~V-~~~~~~~~f~W~~I~~lsf~~k~F~I~~~~~~--~-~~~~F~~~s~~ 189 (356)
.+.+|-|+...|.+ ..+.....|||..|.+..+.++.|.++..... + -...|.+....
T Consensus 34 G~~~L~Lt~~~L~L~~~~~~~~~WPy~~LRRYG~d~~~FsFEaGRrC~tGeGiF~F~t~~~e 95 (146)
T 2kup_A 34 GSGVMELTQSELVLHLHRREAVRWPYLCLRRYGYDSNLFSFESGRRCQTGQGIFAFKCSRAE 95 (146)
T ss_dssp EEEEEEECSSCEEEECSSSCCEEECGGGCSCEEEETTEEEEEECTTSSSCSEEEEEECTTHH
T ss_pred eeEEEEEccCEEEEEcCCCCeeEcCHHHhhhcCccCCEEEEEcCCCCCCCCCEEEEEcCCHH
Confidence 57889999999988 55566789999999999999999999987542 2 24555555543
No 34
>2dlw_A Docking protein 2, isoform A; IRS domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=59.00 E-value=43 Score=27.23 Aligned_cols=64 Identities=11% Similarity=0.022 Sum_probs=46.7
Q ss_pred CeEEEEeeccceEE-eC---ccceeeeecccccceeccCceEEEEEcCCCC---ceEEEEeCCHHHHHHHHHHH
Q psy9052 132 LETILGVTLKGIIV-SG---TNSSKFYKWAEIANVLNHKKNFGIETSNADD---HIVNFVFPDVESAKYVFRMC 198 (356)
Q Consensus 132 ~~l~LGV~~~GI~V-~~---~~~~~~f~W~~I~~lsf~~k~F~I~~~~~~~---~~~~F~~~s~~~AK~Lwklc 198 (356)
.+++|-|...+|.+ .. ...+..||+.-|.+..+.++.|.++...... -...|.+.... .|+.+.
T Consensus 28 G~y~L~l~~~~l~L~~~~~~~~~l~~Wpl~~LRryG~d~~~FsfEaGRrC~tGeG~f~F~t~~~~---~if~~l 98 (113)
T 2dlw_A 28 GSYTLRAGESALELWGGPEPGTQLYDWPYRFLRRFGRDKVTFSFEAGRRCVSGEGNFEFETRQGN---EIFLAL 98 (113)
T ss_dssp SEEEEEECSSBEECCCSSSSCCCSSCCBGGGCCCEEEETTEEEEEECSSCSSCSEEEEECCSTHH---HHHHHH
T ss_pred ccEEEEEcCCEEEEEecCCCCCceEEEEhHHhhhcCccCCEEEEEecCCCCCCCCEEEEEcCCHH---HHHHHH
Confidence 48999999999999 42 2456899999999999999999999875422 23455554443 444443
No 35
>4dbb_A Amyloid beta A4 precursor protein-binding family 1; X11S/mints, PTB domain, chimera protein, protein transport; HET: IPA GOL; 1.90A {Rattus norvegicus}
Probab=57.73 E-value=37 Score=28.87 Aligned_cols=46 Identities=11% Similarity=-0.042 Sum_probs=37.0
Q ss_pred CCCeEEEEeeccceEE-eCc--cceeeeecccccceeccCceEEEEEcC
Q psy9052 130 HGLETILGVTLKGIIV-SGT--NSSKFYKWAEIANVLNHKKNFGIETSN 175 (356)
Q Consensus 130 ~~~~l~LGV~~~GI~V-~~~--~~~~~f~W~~I~~lsf~~k~F~I~~~~ 175 (356)
...++.|-|+.+||.| +.+ ..+..++...|.-.+..++.|....+.
T Consensus 51 ~~~~V~L~IS~~gIkv~d~~t~~~i~~~~l~~ISf~a~~~~~f~fIar~ 99 (162)
T 4dbb_A 51 PMTEVDLFISTQRIKVLNADTQEPMMDHPLRTISYIADIGNIVVLMARR 99 (162)
T ss_dssp CCEEEEEEEESSEEEEEETTTCCEEEEEEGGGEEEEEEETTEEEEEEEE
T ss_pred CCcEEEEEEECCEEEEEECCCCcEEeeeecceeEEEEECCCEEEEEecc
Confidence 3468999999999999 554 456888888888888778888887765
No 36
>2ej8_A DCC-interacting protein 13 alpha; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.84A {Homo sapiens}
Probab=48.30 E-value=40 Score=28.54 Aligned_cols=47 Identities=15% Similarity=0.111 Sum_probs=36.2
Q ss_pred CCCeEEEEeeccceEE-eCc--cceeeeecccccceeccCc---eEEEEEcCC
Q psy9052 130 HGLETILGVTLKGIIV-SGT--NSSKFYKWAEIANVLNHKK---NFGIETSNA 176 (356)
Q Consensus 130 ~~~~l~LGV~~~GI~V-~~~--~~~~~f~W~~I~~lsf~~k---~F~I~~~~~ 176 (356)
....+.|-|+.+||.| +.+ ..+..|+-..|.-++.... .|....+..
T Consensus 55 ~~~~v~L~VS~~gi~l~d~~tk~~~~~~~i~~ISfca~d~~~~r~FafIar~~ 107 (160)
T 2ej8_A 55 RMTESHLLVTCDCLKLIDPQTQVTRLTFPLPCVVLYATHQENKRLFGFVLRTS 107 (160)
T ss_dssp CCCEEEEEEESSEEEEECTTTCCEEEEEEGGGEEEEEEETTEEEEEEEEEEEC
T ss_pred cCCEEEEEEECCeEEEEeCCCCeEEEEeeCCeEEEEEecCCCCeEEEEEEecC
Confidence 3568999999999999 554 3468899888888877664 687777654
No 37
>2ela_A Adapter protein containing PH domain, PTB domain and leucine zipper motif 1; APPL, cell cycle; 2.00A {Homo sapiens}
Probab=43.53 E-value=44 Score=28.87 Aligned_cols=47 Identities=15% Similarity=0.111 Sum_probs=36.2
Q ss_pred CCCeEEEEeeccceEE-eCc--cceeeeecccccceeccCc---eEEEEEcCC
Q psy9052 130 HGLETILGVTLKGIIV-SGT--NSSKFYKWAEIANVLNHKK---NFGIETSNA 176 (356)
Q Consensus 130 ~~~~l~LGV~~~GI~V-~~~--~~~~~f~W~~I~~lsf~~k---~F~I~~~~~ 176 (356)
...++.|-|+.+||.| +.+ ..+..|+-.+|.-++.... .|....+..
T Consensus 68 ~~~~V~L~VS~~gI~l~d~~tk~~i~~~~i~~ISfca~d~~d~r~FafIar~~ 120 (175)
T 2ela_A 68 RMTESHLLVTCDCLKLIDPQTQVTRLTFPLPCVVLYATHQENKRLFGFVLRTS 120 (175)
T ss_dssp CCEEEEEEECSSEEEEECTTTCCEEEEEEGGGEEEEEEETTEEEEEEEEEEEC
T ss_pred cCCEEEEEEECCeEEEEeCCCCcEEEEeecCEEEEEEeCCCCCcEEEEEEecC
Confidence 3467999999999999 554 3468899888888877664 777777653
No 38
>3d8d_A Amyloid beta A4 precursor protein-binding family 1; alpha-beta structure, phosphotyrosine binding domain; 2.20A {Homo sapiens} PDB: 3d8e_A 3d8f_A
Probab=37.30 E-value=1.9e+02 Score=24.52 Aligned_cols=70 Identities=10% Similarity=0.067 Sum_probs=50.8
Q ss_pred CCCeEEEEeeccceEE-eCc--cceeeeecccccceeccC-----ceEEEEEcCCCCc---eEEEEeCCH--HHHHHHHH
Q psy9052 130 HGLETILGVTLKGIIV-SGT--NSSKFYKWAEIANVLNHK-----KNFGIETSNADDH---IVNFVFPDV--ESAKYVFR 196 (356)
Q Consensus 130 ~~~~l~LGV~~~GI~V-~~~--~~~~~f~W~~I~~lsf~~-----k~F~I~~~~~~~~---~~~F~~~s~--~~AK~Lwk 196 (356)
.|+.++|=|+..+|.+ +.. ..+..||-..|.-|.-.+ +.|.+.++..+.. -..|.|+.+ ..|..|-.
T Consensus 53 ~gq~~~L~v~~~tlrLvD~~tk~~L~~~pI~~I~f~~~gr~~~~~~dFAfv~rd~~t~~~~CHvFrCe~~a~~Ia~al~~ 132 (148)
T 3d8d_A 53 EGKDLLLQLEDETLKLVEPQSQALLHAQPIISIRVWGVGRDSGRERDFAYVARDKLTQMLKCHVFRCEAPAKNIATSLHE 132 (148)
T ss_dssp TTCEEEEEEETTEEEEECTTTCCEEEEEEGGGCCEEEECCCC--CCEEEEEEECTTTCCEEEEEEEESSCHHHHHHHHHH
T ss_pred cCceEEEEEcCCeEEEecCCCCceEEEeeEEEEEEEeCCCCCCccccEEEEEecCCCcceEeEEEEcCCchHHHHHHHHH
Confidence 3678999999999999 654 468999999999776632 2598888754322 257888765 46677776
Q ss_pred HHH
Q psy9052 197 MCV 199 (356)
Q Consensus 197 lci 199 (356)
.|.
T Consensus 133 ~c~ 135 (148)
T 3d8d_A 133 ICS 135 (148)
T ss_dssp HHH
T ss_pred HHH
Confidence 664
No 39
>1ntv_A Disabled homolog 1; beta-sandwich, signaling protein; 1.50A {Mus musculus} SCOP: b.55.1.2 PDB: 1nu2_A* 1oqn_A*
Probab=35.07 E-value=67 Score=26.81 Aligned_cols=47 Identities=17% Similarity=0.287 Sum_probs=33.1
Q ss_pred CCCeEEEEeeccceEE-eCcc--ceeeeecccccceeccC---ceEEEEEcCC
Q psy9052 130 HGLETILGVTLKGIIV-SGTN--SSKFYKWAEIANVLNHK---KNFGIETSNA 176 (356)
Q Consensus 130 ~~~~l~LGV~~~GI~V-~~~~--~~~~f~W~~I~~lsf~~---k~F~I~~~~~ 176 (356)
...++.|-|+.+||.| +.++ .+..++..+|.-++... +.|...+++.
T Consensus 59 ~~~~v~L~IS~~GI~v~d~~tk~~~~~~~l~~ISf~a~d~~d~r~FafI~k~~ 111 (152)
T 1ntv_A 59 HKQKIFLTISFGGIKIFDEKTGALQHHHAVHEISYIAKDITDHRAFGYVCGKE 111 (152)
T ss_dssp CCEEEEEEEETTEEEEEETTTCCEEEEECGGGEEEEEECTTCTTEEEEEESST
T ss_pred CCCEEEEEEECCeEEEEECCCCceEeeeecCcEEEEeCCCCCCcEEEEEEEcC
Confidence 3478999999999999 6543 45777777777666532 3566666543
No 40
>1n3h_A SHC transforming protein; free protein, beta sandwich, signaling protein; NMR {Homo sapiens} SCOP: b.55.1.2 PDB: 1oy2_A 2l1c_A* 1shc_A*
Probab=34.00 E-value=51 Score=29.28 Aligned_cols=65 Identities=9% Similarity=0.057 Sum_probs=42.3
Q ss_pred CCeEEEEeeccceEE-eCc--cceeeeeccccccee-c---cCceEEEEEcCCCCceEEEEeC-CHHHHHHHH
Q psy9052 131 GLETILGVTLKGIIV-SGT--NSSKFYKWAEIANVL-N---HKKNFGIETSNADDHIVNFVFP-DVESAKYVF 195 (356)
Q Consensus 131 ~~~l~LGV~~~GI~V-~~~--~~~~~f~W~~I~~ls-f---~~k~F~I~~~~~~~~~~~F~~~-s~~~AK~Lw 195 (356)
..++.|-|+.+||.| +.+ ..+..++-..|.-++ . ..+.|....+...+...++.|. +...|..|-
T Consensus 119 ~~~V~L~IS~~gIkv~d~~t~~~i~~~~i~~ISf~a~~d~~~~~~FafIar~~~~~~~CHVF~cs~~~A~~I~ 191 (207)
T 1n3h_A 119 GMPITLTVSTSSLNLMAADCKQIIANHHMQSISFASGGDPDTAEYVAYVAKDPVNQRACHILECPEGLAQDVI 191 (207)
T ss_dssp SEEEEEEEETTEEEEEETTTTSCBCCCSCCCCSSSCSSSTTSSSCEEEEECCSSSCCEEEEEECSSSTHHHHH
T ss_pred CceEEEEEECCeEEEEeCCCCceeeeeccceEEEEeccCCCcCCEEEEEecCCCCCEEEEEEEcCHHHHHHHH
Confidence 578999999999999 654 346778777777666 2 2367887776543334444443 333455543
No 41
>3f0w_A NUMB-R, NUMB-like protein; PH domain-like, PID domain, phosphoprotein, signaling protei structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens} PDB: 1wj1_A 2nmb_A* 1ddm_A
Probab=32.85 E-value=1.5e+02 Score=24.93 Aligned_cols=64 Identities=11% Similarity=0.091 Sum_probs=42.3
Q ss_pred CCeEEEEeeccceEE-eCc--cceeeeecccccceecc---CceEEEEEcCCCCce---EEEEeCCHHHHHHHH
Q psy9052 131 GLETILGVTLKGIIV-SGT--NSSKFYKWAEIANVLNH---KKNFGIETSNADDHI---VNFVFPDVESAKYVF 195 (356)
Q Consensus 131 ~~~l~LGV~~~GI~V-~~~--~~~~~f~W~~I~~lsf~---~k~F~I~~~~~~~~~---~~F~~~s~~~AK~Lw 195 (356)
..++.|-|+.+||.| +.+ ..+..++...|.-++.. .+.|-...+...... ..|.+.... |+.|-
T Consensus 77 ~~~V~L~VS~~GI~l~d~~t~~~l~~~~i~~ISf~~~d~~~~~~FafIar~~~~~~~~CHvF~c~~~~-A~~I~ 149 (168)
T 3f0w_A 77 SVKSVLWVSADGLRVVDDKTKDLLVDQTIEKVSFCAPDRNLDKAFSYICRDGTTRRWICHCFLALKDS-GERLS 149 (168)
T ss_dssp CEEEEEEECSSEEEEEETTTCCEEEEEEGGGEEEEEECSSCTTEEEEEEEETTTTEEEEEEEEESSSC-HHHHH
T ss_pred CcEEEEEEECCEEEEEeCCCCeEEEeeecCcEEEEecCCCCCcEEEEEEecCCCCcEEEEEEEeccch-HHHHH
Confidence 578999999999999 654 34677887777766653 347887776542222 567776432 44443
No 42
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=29.52 E-value=1.3e+02 Score=28.92 Aligned_cols=44 Identities=11% Similarity=0.000 Sum_probs=30.5
Q ss_pred CeEEEEeeccceEE-eCc--cceeeeecccccceeccCceEEEEEcC
Q psy9052 132 LETILGVTLKGIIV-SGT--NSSKFYKWAEIANVLNHKKNFGIETSN 175 (356)
Q Consensus 132 ~~l~LGV~~~GI~V-~~~--~~~~~f~W~~I~~lsf~~k~F~I~~~~ 175 (356)
.++.|-|+.+||.| +.+ +.+..++...|.-+.-.++.|....+.
T Consensus 66 ~~v~l~IS~~gi~v~~~~t~~~~~~~~l~~IS~~~d~~~~~~~iak~ 112 (388)
T 3suz_A 66 TEVDLFISTQRIKVLNADTQETMMDHALRTISYIADIGNIVVLMARR 112 (388)
T ss_dssp EEEEEEECSSEEEEEETTTCCEEEEEEGGGEEEEEECSSEEEEEEEE
T ss_pred ceEEEEEEeceEEEEecCCcChhhhccccceeEEeecCceEEEEEec
Confidence 57999999999999 554 345666655555544455667776654
No 43
>1p3r_A Disabled homolog 2; PTB, signaling protein; 2.10A {Mus musculus} SCOP: b.55.1.2 PDB: 1m7e_A
Probab=29.08 E-value=93 Score=26.19 Aligned_cols=47 Identities=15% Similarity=0.224 Sum_probs=33.9
Q ss_pred CCCeEEEEeeccceEE-eCcc--ceeeeecccccceeccC---ceEEEEEcCC
Q psy9052 130 HGLETILGVTLKGIIV-SGTN--SSKFYKWAEIANVLNHK---KNFGIETSNA 176 (356)
Q Consensus 130 ~~~~l~LGV~~~GI~V-~~~~--~~~~f~W~~I~~lsf~~---k~F~I~~~~~ 176 (356)
...++.|-|+.+||.| +.++ .+..|+-..|.-.+... +.|....+..
T Consensus 58 ~~~~V~L~IS~~GI~v~d~~tk~~~~~~~l~~ISfca~d~~d~r~FafI~k~~ 110 (160)
T 1p3r_A 58 HKQRIWVNISLSGIKIIDEKTGVIEHEHPVNKISFIARDVTDNRAFGYVCGGE 110 (160)
T ss_dssp CCEEEEEEEETTEEEEEETTTCCEEEEECGGGEEEEEECTTCTTEEEEEESST
T ss_pred CCCEEEEEEECCeEEEEECCCCeEEEecccCeEEEEecCCCCCcEEEEEEecC
Confidence 3467999999999999 6543 45778877777766643 4577777654
No 44
>4fxw_B Splicing factor 1; UHM, protein binding, phosphorylat; HET: SEP; 2.29A {Homo sapiens} PDB: 4fxx_A
Probab=22.61 E-value=37 Score=28.16 Aligned_cols=20 Identities=30% Similarity=0.710 Sum_probs=14.5
Q ss_pred CchhhHhhhCCCCCCCCChH
Q psy9052 285 QDIDKLRSLLPSYRPAPDYE 304 (356)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~ 304 (356)
.=++.+-.+.|.|+|-+||-
T Consensus 103 ~lIe~~~k~~P~fkpP~DYk 122 (124)
T 4fxw_B 103 NLITEMVALNPDFKPPADYK 122 (124)
T ss_dssp HHHHHGGGTCSSCCCCCC--
T ss_pred HHHHHHHHHCcCCCCCCCCC
Confidence 34456668999999999994
No 45
>3ml4_A Protein DOK-7; tyrosine phosphorylation, adapter protein, dimerization, SIG protein; HET: PTR; 2.60A {Mus musculus}
Probab=22.04 E-value=3.3e+02 Score=24.65 Aligned_cols=69 Identities=10% Similarity=0.087 Sum_probs=52.5
Q ss_pred CCeEEEEeeccceEE-eCc--cceeeeecccccceeccCceEEEEEcCCCC---ceEEEEeCCHHHHHHHHHHHH
Q psy9052 131 GLETILGVTLKGIIV-SGT--NSSKFYKWAEIANVLNHKKNFGIETSNADD---HIVNFVFPDVESAKYVFRMCV 199 (356)
Q Consensus 131 ~~~l~LGV~~~GI~V-~~~--~~~~~f~W~~I~~lsf~~k~F~I~~~~~~~---~~~~F~~~s~~~AK~Lwklci 199 (356)
..+++|-|+...+.+ .+. ..+..|+...+......++.|..+.....+ -...|.+...+.--.++.+++
T Consensus 130 sG~a~Lhl~~~~l~L~~~~~~~~l~~W~L~~LRRYG~~~~~F~FE~grrC~~geG~f~f~t~qge~I~~lfd~~~ 204 (224)
T 3ml4_A 130 SGPATLHLCNDILVLARDIPPTVMGQWKLSDLRRYGAVPNGFIFEGGTRCGYWAGVFFLSSAEGEQMSFLFDCIV 204 (224)
T ss_dssp CEEEEEEEETTEEEEEETTTTEEEEEEEGGGEEEEEEETTEEEEEECGGGGGGCEEEEEECSCHHHHHHHHHHHT
T ss_pred CCcEEEEecCCcEEEccCCCccEEEEcchHHhhhhcccCCEeEEecCCcCCCCCCEEEEecCcHHHHHHHHHHHH
Confidence 458999999999999 543 356899999999999999999999864322 245666666666666777664
No 46
>2oqb_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase, transcriptional regulati activation domain; 1.69A {Rattus norvegicus}
Probab=20.50 E-value=3.5e+02 Score=22.05 Aligned_cols=64 Identities=9% Similarity=-0.064 Sum_probs=43.0
Q ss_pred eEEEEeeccceEE---eC-ccceeeeecc-cccceeccCceEEEEEcCCCCceEEEEeCCHHHHHHHHHHHH
Q psy9052 133 ETILGVTLKGIIV---SG-TNSSKFYKWA-EIANVLNHKKNFGIETSNADDHIVNFVFPDVESAKYVFRMCV 199 (356)
Q Consensus 133 ~l~LGV~~~GI~V---~~-~~~~~~f~W~-~I~~lsf~~k~F~I~~~~~~~~~~~F~~~s~~~AK~Lwklci 199 (356)
.+.+.-.++|+.| ++ ......|+-. +-.-..-.++.|.|.+. .+.+-|.|.++..++.+.++..
T Consensus 35 ~L~~~ydpqg~sv~i~~~~~~~l~ef~V~~~TEc~rVGk~S~litlg---~~slLl~Fas~~d~~~F~~~l~ 103 (117)
T 2oqb_A 35 RLEVRAGPDAAGIALYSHEDVCVFKCSVSRETECSRVGRQSFIITLG---CNSVLIQFATPHDFCSFYNILK 103 (117)
T ss_dssp EEEEEECSSEEEEEEECTTCCEEEEEEEETTSEEEEETTTEEEEEET---TEEEEEECSSHHHHHHHHHHHH
T ss_pred EEEEEECCCCcEEEEEcCCCeEEEEEEecCCccceeecCeEEEEEEC---CcEEEEEeCCHHHHHHHHHHHH
Confidence 4555666889988 33 3445555543 33333455678999886 3589999999998888776653
Done!