Your job contains 1 sequence.
>psy9053
MSSTLMPYLKVVRHTLNAAMCLENFSSQVVERHNKPEVEVRTSKELLLTPVLISRNEKEK
VLIEGSINSVRISIAVKQADEIEKILCHKFMRFMMMRAENFIVLRRKPIEGYDISFLITN
FHTEQMYKHKLVDFVLHFMEEIDKEISEMKLAVNARARICSEEFLKRF
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy9053
(168 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q148J6 - symbol:ARPC4 "Actin-related protein 2/... 759 2.7e-75 1
UNIPROTKB|P59998 - symbol:ARPC4 "Actin-related protein 2/... 759 2.7e-75 1
MGI|MGI:1915339 - symbol:Arpc4 "actin related protein 2/3... 759 2.7e-75 1
RGD|1310096 - symbol:Arpc4 "actin related protein 2/3 com... 759 2.7e-75 1
UNIPROTKB|F1SQE6 - symbol:ARPC4 "Uncharacterized protein"... 754 9.3e-75 1
UNIPROTKB|F8WCF6 - symbol:ARPC4 "Actin-related protein 2/... 753 1.2e-74 1
ZFIN|ZDB-GENE-010724-9 - symbol:arpc4 "actin related prot... 753 1.2e-74 1
UNIPROTKB|E2QWU0 - symbol:ARPC4 "Uncharacterized protein"... 748 4.0e-74 1
FB|FBgn0031781 - symbol:Arpc4 "Actin-related protein 2/3 ... 726 8.6e-72 1
WB|WBGene00000204 - symbol:arx-6 species:6239 "Caenorhabd... 692 3.5e-68 1
DICTYBASE|DDB_G0269102 - symbol:arcD "actin-related prote... 624 5.5e-61 1
UNIPROTKB|F1P010 - symbol:F1P010 "Uncharacterized protein... 592 1.4e-57 1
ASPGD|ASPL0000073271 - symbol:AN8698 species:162425 "Emer... 588 3.6e-57 1
POMBASE|SPAC6G9.07c - symbol:arc4 "ARP2/3 actin-organizin... 569 3.7e-55 1
SGD|S000001496 - symbol:ARC19 "Subunit of the ARP2/3 comp... 541 3.5e-52 1
UNIPROTKB|F8WDD7 - symbol:ARPC4 "Actin-related protein 2/... 482 6.2e-46 1
UNIPROTKB|F6TTL5 - symbol:ARPC4 "Actin-related protein 2/... 371 3.6e-34 1
UNIPROTKB|H7C0A3 - symbol:ARPC4-TTLL3 "Protein ARPC4-TTLL... 322 5.6e-29 1
UNIPROTKB|F8WE39 - symbol:ARPC4 "Actin-related protein 2/... 169 9.1e-13 1
UNIPROTKB|F8WDW3 - symbol:ARPC4 "Actin-related protein 2/... 164 3.1e-12 1
>UNIPROTKB|Q148J6 [details] [associations]
symbol:ARPC4 "Actin-related protein 2/3 complex subunit 4"
species:9913 "Bos taurus" [GO:0042995 "cell projection"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003779
"actin binding" evidence=IEA] [GO:0034314 "Arp2/3 complex-mediated
actin nucleation" evidence=IEA] [GO:0030041 "actin filament
polymerization" evidence=IEA] [GO:0005885 "Arp2/3 protein complex"
evidence=IEA] InterPro:IPR008384 Pfam:PF05856 GO:GO:0005737
GO:GO:0005856 GO:GO:0030041 GO:GO:0042995 PDB:1K8K PDB:1TYQ
PDB:1U2V PDB:2P9I PDB:2P9K PDB:2P9L PDB:2P9N PDB:2P9P PDB:2P9S
PDB:2P9U PDB:3DXK PDB:3DXM PDB:3RSE PDBsum:1K8K PDBsum:1TYQ
PDBsum:1U2V PDBsum:2P9I PDBsum:2P9K PDBsum:2P9L PDBsum:2P9N
PDBsum:2P9P PDBsum:2P9S PDBsum:2P9U PDBsum:3DXK PDBsum:3DXM
PDBsum:3RSE EMBL:BC118263 IPI:IPI00708767 RefSeq:NP_001069631.1
UniGene:Bt.106660 ProteinModelPortal:Q148J6 SMR:Q148J6
DIP:DIP-29794N STRING:Q148J6 PRIDE:Q148J6
Ensembl:ENSBTAT00000010469 GeneID:539459 KEGG:bta:539459 CTD:10093
eggNOG:NOG261545 GeneTree:ENSGT00390000016233 HOGENOM:HOG000202303
HOVERGEN:HBG050582 InParanoid:Q148J6 KO:K05755 OMA:MCLENFS
OrthoDB:EOG4HDSVQ EvolutionaryTrace:Q148J6 NextBio:20878000
PANTHER:PTHR22629 Uniprot:Q148J6
Length = 168
Score = 759 (272.2 bits), Expect = 2.7e-75, P = 2.7e-75
Identities = 148/168 (88%), Positives = 158/168 (94%)
Query: 1 MSSTLMPYLKVVRHTLNAAMCLENFSSQVVERHNKPEVEVRTSKELLLTPVLISRNEKEK 60
M++TL PYL VR TL AA+CLENFSSQVVERHNKPEVEVR+SKELLL PV ISRNEKEK
Sbjct: 1 MTATLRPYLSAVRATLQAALCLENFSSQVVERHNKPEVEVRSSKELLLQPVTISRNEKEK 60
Query: 61 VLIEGSINSVRISIAVKQADEIEKILCHKFMRFMMMRAENFIVLRRKPIEGYDISFLITN 120
VLIEGSINSVR+SIAVKQADEIEKILCHKFMRFMMMRAENF +LRRKP+EGYDISFLITN
Sbjct: 61 VLIEGSINSVRVSIAVKQADEIEKILCHKFMRFMMMRAENFFILRRKPVEGYDISFLITN 120
Query: 121 FHTEQMYKHKLVDFVLHFMEEIDKEISEMKLAVNARARICSEEFLKRF 168
FHTEQMYKHKLVDFV+HFMEEIDKEISEMKL+VNARARI +EEFLK F
Sbjct: 121 FHTEQMYKHKLVDFVIHFMEEIDKEISEMKLSVNARARIVAEEFLKNF 168
>UNIPROTKB|P59998 [details] [associations]
symbol:ARPC4 "Actin-related protein 2/3 complex subunit 4"
species:9606 "Homo sapiens" [GO:0030041 "actin filament
polymerization" evidence=IEA] [GO:0034314 "Arp2/3 complex-mediated
actin nucleation" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0042995 "cell projection" evidence=IEA]
[GO:0005885 "Arp2/3 protein complex" evidence=IDA] [GO:0030674
"protein binding, bridging" evidence=IPI] [GO:0051015 "actin
filament binding" evidence=NAS] [GO:0045010 "actin nucleation"
evidence=NAS] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR008384 Pfam:PF05856 GO:GO:0005737 GO:GO:0030041
GO:GO:0042995 GO:GO:0045010 GO:GO:0005885 CTD:10093
eggNOG:NOG261545 HOGENOM:HOG000202303 HOVERGEN:HBG050582 KO:K05755
OrthoDB:EOG4HDSVQ PANTHER:PTHR22629 EMBL:AF019888 EMBL:AF006087
EMBL:BC012596 IPI:IPI00554811 RefSeq:NP_005709.1 UniGene:Hs.323342
ProteinModelPortal:P59998 SMR:P59998 DIP:DIP-33188N IntAct:P59998
STRING:P59998 PhosphoSite:P59998 DMDM:38372625 PaxDb:P59998
PRIDE:P59998 DNASU:10093 Ensembl:ENST00000397261 GeneID:10093
KEGG:hsa:10093 UCSC:uc003bsz.2 GeneCards:GC03P009834 HGNC:HGNC:707
MIM:604226 neXtProt:NX_P59998 PharmGKB:PA25002 ChiTaRS:ARPC4
GenomeRNAi:10093 NextBio:38169 ArrayExpress:P59998 Bgee:P59998
CleanEx:HS_ARPC4 Genevestigator:P59998 GermOnline:ENSG00000156983
Uniprot:P59998
Length = 168
Score = 759 (272.2 bits), Expect = 2.7e-75, P = 2.7e-75
Identities = 148/168 (88%), Positives = 158/168 (94%)
Query: 1 MSSTLMPYLKVVRHTLNAAMCLENFSSQVVERHNKPEVEVRTSKELLLTPVLISRNEKEK 60
M++TL PYL VR TL AA+CLENFSSQVVERHNKPEVEVR+SKELLL PV ISRNEKEK
Sbjct: 1 MTATLRPYLSAVRATLQAALCLENFSSQVVERHNKPEVEVRSSKELLLQPVTISRNEKEK 60
Query: 61 VLIEGSINSVRISIAVKQADEIEKILCHKFMRFMMMRAENFIVLRRKPIEGYDISFLITN 120
VLIEGSINSVR+SIAVKQADEIEKILCHKFMRFMMMRAENF +LRRKP+EGYDISFLITN
Sbjct: 61 VLIEGSINSVRVSIAVKQADEIEKILCHKFMRFMMMRAENFFILRRKPVEGYDISFLITN 120
Query: 121 FHTEQMYKHKLVDFVLHFMEEIDKEISEMKLAVNARARICSEEFLKRF 168
FHTEQMYKHKLVDFV+HFMEEIDKEISEMKL+VNARARI +EEFLK F
Sbjct: 121 FHTEQMYKHKLVDFVIHFMEEIDKEISEMKLSVNARARIVAEEFLKNF 168
>MGI|MGI:1915339 [details] [associations]
symbol:Arpc4 "actin related protein 2/3 complex, subunit 4"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0003779 "actin binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005885 "Arp2/3 protein complex" evidence=ISO;TAS] [GO:0008150
"biological_process" evidence=ND] [GO:0030041 "actin filament
polymerization" evidence=IEA] [GO:0034314 "Arp2/3 complex-mediated
actin nucleation" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR008384 Pfam:PF05856 MGI:MGI:1915339
GO:GO:0005737 GO:GO:0030041 GO:GO:0042995 GO:GO:0005885 CTD:10093
eggNOG:NOG261545 GeneTree:ENSGT00390000016233 HOGENOM:HOG000202303
HOVERGEN:HBG050582 KO:K05755 OMA:MCLENFS PANTHER:PTHR22629
EMBL:AJ278129 EMBL:AK017993 EMBL:AK039215 EMBL:AK077325
EMBL:AK133626 EMBL:AK136082 EMBL:AK150690 EMBL:AK153380
EMBL:AK166440 EMBL:BC015280 IPI:IPI00138691 RefSeq:NP_001163956.1
RefSeq:NP_001163957.1 RefSeq:NP_080828.1 UniGene:Mm.289306
UniGene:Mm.472172 ProteinModelPortal:P59999 SMR:P59999
IntAct:P59999 STRING:P59999 PhosphoSite:P59999 PaxDb:P59999
PRIDE:P59999 Ensembl:ENSMUST00000156898 GeneID:68089 KEGG:mmu:68089
UCSC:uc009dfs.2 InParanoid:P59999 NextBio:326392 Bgee:P59999
CleanEx:MM_ARPC4 Genevestigator:P59999
GermOnline:ENSMUSG00000072846 Uniprot:P59999
Length = 168
Score = 759 (272.2 bits), Expect = 2.7e-75, P = 2.7e-75
Identities = 148/168 (88%), Positives = 158/168 (94%)
Query: 1 MSSTLMPYLKVVRHTLNAAMCLENFSSQVVERHNKPEVEVRTSKELLLTPVLISRNEKEK 60
M++TL PYL VR TL AA+CLENFSSQVVERHNKPEVEVR+SKELLL PV ISRNEKEK
Sbjct: 1 MTATLRPYLSAVRATLQAALCLENFSSQVVERHNKPEVEVRSSKELLLQPVTISRNEKEK 60
Query: 61 VLIEGSINSVRISIAVKQADEIEKILCHKFMRFMMMRAENFIVLRRKPIEGYDISFLITN 120
VLIEGSINSVR+SIAVKQADEIEKILCHKFMRFMMMRAENF +LRRKP+EGYDISFLITN
Sbjct: 61 VLIEGSINSVRVSIAVKQADEIEKILCHKFMRFMMMRAENFFILRRKPVEGYDISFLITN 120
Query: 121 FHTEQMYKHKLVDFVLHFMEEIDKEISEMKLAVNARARICSEEFLKRF 168
FHTEQMYKHKLVDFV+HFMEEIDKEISEMKL+VNARARI +EEFLK F
Sbjct: 121 FHTEQMYKHKLVDFVIHFMEEIDKEISEMKLSVNARARIVAEEFLKNF 168
>RGD|1310096 [details] [associations]
symbol:Arpc4 "actin related protein 2/3 complex, subunit 4"
species:10116 "Rattus norvegicus" [GO:0005885 "Arp2/3 protein
complex" evidence=IEA] [GO:0030041 "actin filament polymerization"
evidence=IEA] [GO:0034314 "Arp2/3 complex-mediated actin
nucleation" evidence=IEA] InterPro:IPR008384 Pfam:PF05856
RGD:1310096 GO:GO:0005856 GO:GO:0030041 CTD:10093 eggNOG:NOG261545
GeneTree:ENSGT00390000016233 HOGENOM:HOG000202303
HOVERGEN:HBG050582 KO:K05755 OrthoDB:EOG4HDSVQ PANTHER:PTHR22629
EMBL:CH473957 EMBL:BC167049 IPI:IPI00372040 RefSeq:NP_001100085.2
UniGene:Rn.198683 SMR:B2RZ72 MINT:MINT-7138173 STRING:B2RZ72
Ensembl:ENSRNOT00000011937 GeneID:297518 KEGG:rno:297518
UCSC:RGD:1310096 NextBio:642364 Genevestigator:B2RZ72
Uniprot:B2RZ72
Length = 168
Score = 759 (272.2 bits), Expect = 2.7e-75, P = 2.7e-75
Identities = 148/168 (88%), Positives = 158/168 (94%)
Query: 1 MSSTLMPYLKVVRHTLNAAMCLENFSSQVVERHNKPEVEVRTSKELLLTPVLISRNEKEK 60
M++TL PYL VR TL AA+CLENFSSQVVERHNKPEVEVR+SKELLL PV ISRNEKEK
Sbjct: 1 MTATLRPYLSAVRATLQAALCLENFSSQVVERHNKPEVEVRSSKELLLQPVTISRNEKEK 60
Query: 61 VLIEGSINSVRISIAVKQADEIEKILCHKFMRFMMMRAENFIVLRRKPIEGYDISFLITN 120
VLIEGSINSVR+SIAVKQADEIEKILCHKFMRFMMMRAENF +LRRKP+EGYDISFLITN
Sbjct: 61 VLIEGSINSVRVSIAVKQADEIEKILCHKFMRFMMMRAENFFILRRKPVEGYDISFLITN 120
Query: 121 FHTEQMYKHKLVDFVLHFMEEIDKEISEMKLAVNARARICSEEFLKRF 168
FHTEQMYKHKLVDFV+HFMEEIDKEISEMKL+VNARARI +EEFLK F
Sbjct: 121 FHTEQMYKHKLVDFVIHFMEEIDKEISEMKLSVNARARIVAEEFLKNF 168
>UNIPROTKB|F1SQE6 [details] [associations]
symbol:ARPC4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0034314 "Arp2/3 complex-mediated actin nucleation"
evidence=IEA] [GO:0030041 "actin filament polymerization"
evidence=IEA] [GO:0005885 "Arp2/3 protein complex" evidence=IEA]
InterPro:IPR008384 Pfam:PF05856 GO:GO:0005856 GO:GO:0030041
GeneTree:ENSGT00390000016233 OMA:MCLENFS PANTHER:PTHR22629
EMBL:CU633418 UniGene:Ssc.51863 Ensembl:ENSSSCT00000012642
Uniprot:F1SQE6
Length = 167
Score = 754 (270.5 bits), Expect = 9.3e-75, P = 9.3e-75
Identities = 147/167 (88%), Positives = 157/167 (94%)
Query: 2 SSTLMPYLKVVRHTLNAAMCLENFSSQVVERHNKPEVEVRTSKELLLTPVLISRNEKEKV 61
++TL PYL VR TL AA+CLENFSSQVVERHNKPEVEVR+SKELLL PV ISRNEKEKV
Sbjct: 1 TATLRPYLSAVRATLQAALCLENFSSQVVERHNKPEVEVRSSKELLLQPVTISRNEKEKV 60
Query: 62 LIEGSINSVRISIAVKQADEIEKILCHKFMRFMMMRAENFIVLRRKPIEGYDISFLITNF 121
LIEGSINSVR+SIAVKQADEIEKILCHKFMRFMMMRAENF +LRRKP+EGYDISFLITNF
Sbjct: 61 LIEGSINSVRVSIAVKQADEIEKILCHKFMRFMMMRAENFFILRRKPVEGYDISFLITNF 120
Query: 122 HTEQMYKHKLVDFVLHFMEEIDKEISEMKLAVNARARICSEEFLKRF 168
HTEQMYKHKLVDFV+HFMEEIDKEISEMKL+VNARARI +EEFLK F
Sbjct: 121 HTEQMYKHKLVDFVIHFMEEIDKEISEMKLSVNARARIVAEEFLKNF 167
>UNIPROTKB|F8WCF6 [details] [associations]
symbol:ARPC4 "Actin-related protein 2/3 complex subunit 4"
species:9606 "Homo sapiens" [GO:0005885 "Arp2/3 protein complex"
evidence=IEA] [GO:0030041 "actin filament polymerization"
evidence=IEA] [GO:0034314 "Arp2/3 complex-mediated actin
nucleation" evidence=IEA] InterPro:IPR008384 Pfam:PF05856
GO:GO:0005856 GO:GO:0030041 PANTHER:PTHR22629 HGNC:HGNC:707
ChiTaRS:ARPC4 EMBL:AC022382 IPI:IPI00925334
ProteinModelPortal:F8WCF6 SMR:F8WCF6 Ensembl:ENST00000424442
ArrayExpress:F8WCF6 Bgee:F8WCF6 Uniprot:F8WCF6
Length = 181
Score = 753 (270.1 bits), Expect = 1.2e-74, P = 1.2e-74
Identities = 147/166 (88%), Positives = 157/166 (94%)
Query: 1 MSSTLMPYLKVVRHTLNAAMCLENFSSQVVERHNKPEVEVRTSKELLLTPVLISRNEKEK 60
M++TL PYL VR TL AA+CLENFSSQVVERHNKPEVEVR+SKELLL PV ISRNEKEK
Sbjct: 1 MTATLRPYLSAVRATLQAALCLENFSSQVVERHNKPEVEVRSSKELLLQPVTISRNEKEK 60
Query: 61 VLIEGSINSVRISIAVKQADEIEKILCHKFMRFMMMRAENFIVLRRKPIEGYDISFLITN 120
VLIEGSINSVR+SIAVKQADEIEKILCHKFMRFMMMRAENF +LRRKP+EGYDISFLITN
Sbjct: 61 VLIEGSINSVRVSIAVKQADEIEKILCHKFMRFMMMRAENFFILRRKPVEGYDISFLITN 120
Query: 121 FHTEQMYKHKLVDFVLHFMEEIDKEISEMKLAVNARARICSEEFLK 166
FHTEQMYKHKLVDFV+HFMEEIDKEISEMKL+VNARARI +EEFLK
Sbjct: 121 FHTEQMYKHKLVDFVIHFMEEIDKEISEMKLSVNARARIVAEEFLK 166
>ZFIN|ZDB-GENE-010724-9 [details] [associations]
symbol:arpc4 "actin related protein 2/3 complex,
subunit 4" species:7955 "Danio rerio" [GO:0034314 "Arp2/3
complex-mediated actin nucleation" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0030041 "actin filament
polymerization" evidence=IEA] [GO:0005885 "Arp2/3 protein complex"
evidence=IEA] InterPro:IPR008384 Pfam:PF05856
ZFIN:ZDB-GENE-010724-9 GO:GO:0005856 GO:GO:0030041
GeneTree:ENSGT00390000016233 PANTHER:PTHR22629 EMBL:CR450814
IPI:IPI00504792 Ensembl:ENSDART00000146470 ArrayExpress:E9QJ46
Bgee:E9QJ46 Uniprot:E9QJ46
Length = 193
Score = 753 (270.1 bits), Expect = 1.2e-74, P = 1.2e-74
Identities = 146/167 (87%), Positives = 158/167 (94%)
Query: 2 SSTLMPYLKVVRHTLNAAMCLENFSSQVVERHNKPEVEVRTSKELLLTPVLISRNEKEKV 61
++TL PYL VR TL AA+CLENFSSQVVERHNKPEVEVR+SKELLL PV+ISRN+KEKV
Sbjct: 27 TATLRPYLNAVRATLQAALCLENFSSQVVERHNKPEVEVRSSKELLLQPVVISRNDKEKV 86
Query: 62 LIEGSINSVRISIAVKQADEIEKILCHKFMRFMMMRAENFIVLRRKPIEGYDISFLITNF 121
LIEGSINSVR+SIAVKQADEIEKILCHKFMRFMMMRAENF +LRRKP+EGYDISFLITNF
Sbjct: 87 LIEGSINSVRVSIAVKQADEIEKILCHKFMRFMMMRAENFFILRRKPVEGYDISFLITNF 146
Query: 122 HTEQMYKHKLVDFVLHFMEEIDKEISEMKLAVNARARICSEEFLKRF 168
HTEQMYKHKLVDFV+HFMEEIDKEISEMKL+VNARARI +EEFLK F
Sbjct: 147 HTEQMYKHKLVDFVIHFMEEIDKEISEMKLSVNARARIVAEEFLKNF 193
>UNIPROTKB|E2QWU0 [details] [associations]
symbol:ARPC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0034314 "Arp2/3 complex-mediated actin
nucleation" evidence=IEA] [GO:0030041 "actin filament
polymerization" evidence=IEA] [GO:0005885 "Arp2/3 protein complex"
evidence=IEA] InterPro:IPR008384 Pfam:PF05856 GO:GO:0005856
GO:GO:0030041 GeneTree:ENSGT00390000016233 OMA:MCLENFS
PANTHER:PTHR22629 EMBL:AAEX03012078 ProteinModelPortal:E2QWU0
PRIDE:E2QWU0 Ensembl:ENSCAFT00000008564 NextBio:20852177
Uniprot:E2QWU0
Length = 167
Score = 748 (268.4 bits), Expect = 4.0e-74, P = 4.0e-74
Identities = 146/165 (88%), Positives = 156/165 (94%)
Query: 2 SSTLMPYLKVVRHTLNAAMCLENFSSQVVERHNKPEVEVRTSKELLLTPVLISRNEKEKV 61
++TL PYL VR TL AA+CLENFSSQVVERHNKPEVEVR+SKELLL PV ISRNEKEKV
Sbjct: 2 TATLRPYLSAVRATLQAALCLENFSSQVVERHNKPEVEVRSSKELLLQPVTISRNEKEKV 61
Query: 62 LIEGSINSVRISIAVKQADEIEKILCHKFMRFMMMRAENFIVLRRKPIEGYDISFLITNF 121
LIEGSINSVR+SIAVKQADEIEKILCHKFMRFMMMRAENF +LRRKP+EGYDISFLITNF
Sbjct: 62 LIEGSINSVRVSIAVKQADEIEKILCHKFMRFMMMRAENFFILRRKPVEGYDISFLITNF 121
Query: 122 HTEQMYKHKLVDFVLHFMEEIDKEISEMKLAVNARARICSEEFLK 166
HTEQMYKHKLVDFV+HFMEEIDKEISEMKL+VNARARI +EEFLK
Sbjct: 122 HTEQMYKHKLVDFVIHFMEEIDKEISEMKLSVNARARIVAEEFLK 166
>FB|FBgn0031781 [details] [associations]
symbol:Arpc4 "Actin-related protein 2/3 complex, subunit 4"
species:7227 "Drosophila melanogaster" [GO:0003779 "actin binding"
evidence=ISS] [GO:0005200 "structural constituent of cytoskeleton"
evidence=ISS] [GO:0034314 "Arp2/3 complex-mediated actin
nucleation" evidence=ISS] [GO:0005885 "Arp2/3 protein complex"
evidence=ISS] [GO:0008360 "regulation of cell shape" evidence=IMP]
[GO:0030866 "cortical actin cytoskeleton organization"
evidence=IMP] [GO:0030031 "cell projection assembly" evidence=IMP]
[GO:0006911 "phagocytosis, engulfment" evidence=IMP] [GO:0042060
"wound healing" evidence=IMP] [GO:0000902 "cell morphogenesis"
evidence=IMP] InterPro:IPR008384 Pfam:PF05856 GO:GO:0003779
GO:GO:0006911 EMBL:AE014134 GO:GO:0008360 GO:GO:0005856
GO:GO:0030866 GO:GO:0030041 GO:GO:0000902 GO:GO:0042060
GO:GO:0030031 eggNOG:NOG261545 GeneTree:ENSGT00390000016233
KO:K05755 OMA:MCLENFS PANTHER:PTHR22629 EMBL:AY113475 EMBL:BT125913
RefSeq:NP_608996.1 UniGene:Dm.30772 SMR:Q9VMH2 IntAct:Q9VMH2
MINT:MINT-319668 STRING:Q9VMH2 EnsemblMetazoa:FBtr0079200
GeneID:33864 KEGG:dme:Dmel_CG5972 UCSC:CG5972-RA CTD:33864
FlyBase:FBgn0031781 InParanoid:Q9VMH2 OrthoDB:EOG4WM39X
GenomeRNAi:33864 NextBio:785680 Uniprot:Q9VMH2
Length = 168
Score = 726 (260.6 bits), Expect = 8.6e-72, P = 8.6e-72
Identities = 139/168 (82%), Positives = 157/168 (93%)
Query: 1 MSSTLMPYLKVVRHTLNAAMCLENFSSQVVERHNKPEVEVRTSKELLLTPVLISRNEKEK 60
M++TL PYL VRH+L AAMCL++F SQVVERHNKPEVE+ +SKEL+LTPV++SRNE+EK
Sbjct: 1 MAATLKPYLTAVRHSLTAAMCLQDFPSQVVERHNKPEVEICSSKELVLTPVVVSRNEREK 60
Query: 61 VLIEGSINSVRISIAVKQADEIEKILCHKFMRFMMMRAENFIVLRRKPIEGYDISFLITN 120
VLIE SINSVR+SIAVKQADEIE+ILCHKF RFMM RAE+F++LRRKPIEGYDISFLITN
Sbjct: 61 VLIEPSINSVRVSIAVKQADEIERILCHKFTRFMMRRAESFVILRRKPIEGYDISFLITN 120
Query: 121 FHTEQMYKHKLVDFVLHFMEEIDKEISEMKLAVNARARICSEEFLKRF 168
FHTEQMYKHKLVDFV+ FMEEIDKEISEMKLAVNARAR C+EEFLKRF
Sbjct: 121 FHTEQMYKHKLVDFVISFMEEIDKEISEMKLAVNARARTCAEEFLKRF 168
>WB|WBGene00000204 [details] [associations]
symbol:arx-6 species:6239 "Caenorhabditis elegans"
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0030041 "actin
filament polymerization" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009790 "embryo development" evidence=IMP] [GO:0043652
"engulfment of apoptotic cell" evidence=IMP] [GO:0016331
"morphogenesis of embryonic epithelium" evidence=IMP] [GO:0010631
"epithelial cell migration" evidence=IMP] InterPro:IPR008384
Pfam:PF05856 GO:GO:0009792 GO:GO:0005737 GO:GO:0040010
GO:GO:0005856 GO:GO:0030041 GO:GO:0016331 GO:GO:0043652
GO:GO:0010631 eggNOG:NOG261545 GeneTree:ENSGT00390000016233
HOGENOM:HOG000202303 KO:K05755 OMA:MCLENFS PANTHER:PTHR22629
EMBL:FO080789 RefSeq:NP_498020.1 ProteinModelPortal:P58798
SMR:P58798 STRING:P58798 PaxDb:P58798 EnsemblMetazoa:C35D10.16
GeneID:175650 KEGG:cel:CELE_C35D10.16 UCSC:C35D10.16 CTD:175650
WormBase:C35D10.16 InParanoid:P58798 NextBio:889060 Uniprot:P58798
Length = 169
Score = 692 (248.7 bits), Expect = 3.5e-68, P = 3.5e-68
Identities = 131/168 (77%), Positives = 154/168 (91%)
Query: 1 MSSTLMPYLKVVRHTLNAAMCLENFSSQVVERHNKPEVEVRTSKELLLTPVLISRNEKEK 60
MS+TL PYL+ VRHTL AA+CLE FSSQVVERHNKPEVEV+TSKELL+TPV+++RN++E+
Sbjct: 1 MSATLQPYLEAVRHTLQAALCLEQFSSQVVERHNKPEVEVQTSKELLMTPVVVARNKQER 60
Query: 61 VLIEGSINSVRISIAVKQADEIEKILCHKFMRFMMMRAENFIVLRRKPIEGYDISFLITN 120
VLIE S+NSVRISIA+KQ+DEIEKILCHKF RFM RA+NF VLRRKP+ GYDISFLIT
Sbjct: 61 VLIEPSVNSVRISIAIKQSDEIEKILCHKFTRFMCQRADNFFVLRRKPLPGYDISFLITA 120
Query: 121 FHTEQMYKHKLVDFVLHFMEEIDKEISEMKLAVNARARICSEEFLKRF 168
HTE M+KHKLVDF+LHFM+EIDKEISEMKL++NARAR+ +EEFLKRF
Sbjct: 121 SHTEAMFKHKLVDFLLHFMQEIDKEISEMKLSLNARARVSAEEFLKRF 168
>DICTYBASE|DDB_G0269102 [details] [associations]
symbol:arcD "actin-related protein 2/3 complex,
subunit 4" species:44689 "Dictyostelium discoideum" [GO:0030670
"phagocytic vesicle membrane" evidence=IDA] [GO:0006909
"phagocytosis" evidence=IEP] [GO:0006887 "exocytosis" evidence=IEP]
[GO:0031982 "vesicle" evidence=IDA] [GO:0005885 "Arp2/3 protein
complex" evidence=IEA;IDA] [GO:0030864 "cortical actin
cytoskeleton" evidence=IC] [GO:0030175 "filopodium" evidence=IC]
[GO:0051015 "actin filament binding" evidence=TAS] [GO:0045335
"phagocytic vesicle" evidence=TAS] [GO:0045010 "actin nucleation"
evidence=TAS] [GO:0030041 "actin filament polymerization"
evidence=IEA;TAS] [GO:0006928 "cellular component movement"
evidence=TAS] [GO:0031252 "cell leading edge" evidence=IDA]
[GO:0031143 "pseudopodium" evidence=IEA;IDA] [GO:0034314 "Arp2/3
complex-mediated actin nucleation" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003779
"actin binding" evidence=IEA] [GO:0005938 "cell cortex"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005905
"coated pit" evidence=IDA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR008384 Pfam:PF05856
dictyBase:DDB_G0269102 GO:GO:0005829 GO:GO:0031252
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0030670
GO:GO:0006909 GO:GO:0006928 GO:GO:0030175 GO:GO:0031143
GO:GO:0030041 GO:GO:0030864 GO:GO:0006887 GO:GO:0045010
GO:GO:0005885 eggNOG:NOG261545 KO:K05755 OMA:MCLENFS
PANTHER:PTHR22629 EMBL:AF095933 RefSeq:XP_646414.1
ProteinModelPortal:O96625 SMR:O96625 STRING:O96625 PRIDE:O96625
EnsemblProtists:DDB0191121 GeneID:8617371 KEGG:ddi:DDB_G0269102
ProtClustDB:PTZ00278 Uniprot:O96625
Length = 169
Score = 624 (224.7 bits), Expect = 5.5e-61, P = 5.5e-61
Identities = 111/168 (66%), Positives = 147/168 (87%)
Query: 1 MSSTLMPYLKVVRHTLNAAMCLENFSSQVVERHNKPEVEVRTSKELLLTPVLISRNEKEK 60
MS+ +PYL +R+TL A+MCL+NF SQ+VERHNKPEVEV+TSKEL+L PV+I+RN+ E+
Sbjct: 1 MSTAQVPYLNCIRNTLTASMCLQNFGSQIVERHNKPEVEVKTSKELVLNPVIIARNKNER 60
Query: 61 VLIEGSINSVRISIAVKQADEIEKILCHKFMRFMMMRAENFIVLRRKPIEGYDISFLITN 120
VLIE SINS+RIS+++K++DE++ IL KF+RF+ RAENFI+LRRKP+EGYDISFL+TN
Sbjct: 61 VLIETSINSIRISVSIKKSDEVDVILAKKFVRFLQQRAENFIILRRKPVEGYDISFLVTN 120
Query: 121 FHTEQMYKHKLVDFVLHFMEEIDKEISEMKLAVNARARICSEEFLKRF 168
FHTE M+KHKLVDF++ FME+ID+EIS++KL +NAR RI + E+LK F
Sbjct: 121 FHTENMFKHKLVDFIIQFMEDIDREISDLKLTLNARGRIVASEYLKNF 168
>UNIPROTKB|F1P010 [details] [associations]
symbol:F1P010 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005885 "Arp2/3 protein complex" evidence=IEA]
[GO:0030041 "actin filament polymerization" evidence=IEA]
[GO:0034314 "Arp2/3 complex-mediated actin nucleation"
evidence=IEA] InterPro:IPR008384 Pfam:PF05856 GO:GO:0005856
GO:GO:0030041 GeneTree:ENSGT00390000016233 PANTHER:PTHR22629
EMBL:AADN02014160 IPI:IPI00586861 Ensembl:ENSGALT00000010814
OMA:SFLIPFD Uniprot:F1P010
Length = 128
Score = 592 (213.5 bits), Expect = 1.4e-57, P = 1.4e-57
Identities = 115/128 (89%), Positives = 123/128 (96%)
Query: 41 RTSKELLLTPVLISRNEKEKVLIEGSINSVRISIAVKQADEIEKILCHKFMRFMMMRAEN 100
R+SKELLL PV+ISRNEKEKVLIEGSINSVR+SIAVKQADEIEKILCHKFMRFMMMRAE
Sbjct: 1 RSSKELLLQPVIISRNEKEKVLIEGSINSVRVSIAVKQADEIEKILCHKFMRFMMMRAEK 60
Query: 101 FIVLRRKPIEGYDISFLITNFHTEQMYKHKLVDFVLHFMEEIDKEISEMKLAVNARARIC 160
F +LRRKP+EGYDISFLITNFHTEQMYKHKLVDFV+HFMEEIDKEISEMKL+VNARARI
Sbjct: 61 FFILRRKPVEGYDISFLITNFHTEQMYKHKLVDFVIHFMEEIDKEISEMKLSVNARARIV 120
Query: 161 SEEFLKRF 168
+EEFLK F
Sbjct: 121 AEEFLKNF 128
>ASPGD|ASPL0000073271 [details] [associations]
symbol:AN8698 species:162425 "Emericella nidulans"
[GO:0030041 "actin filament polymerization" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005885 "Arp2/3 protein
complex" evidence=IEA] [GO:0030479 "actin cortical patch"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] [GO:0000147 "actin
cortical patch assembly" evidence=IEA] [GO:0034314 "Arp2/3
complex-mediated actin nucleation" evidence=IEA] InterPro:IPR008384
Pfam:PF05856 GO:GO:0005856 GO:GO:0030041 EMBL:BN001303 OMA:MCLENFS
PANTHER:PTHR22629 EnsemblFungi:CADANIAT00006374 Uniprot:C8VA50
Length = 169
Score = 588 (212.0 bits), Expect = 3.6e-57, P = 3.6e-57
Identities = 114/168 (67%), Positives = 135/168 (80%)
Query: 1 MSSTLMPYLKVVRHTLNAAMCLENFSSQVVERHNKPEVEVRTSKELLLTPVLISRNEKEK 60
MS +L PYL+ VR +L AA+ + NF+SQ ERHN PE+E +S ELLL P+ ISRNE EK
Sbjct: 1 MSQSLRPYLQCVRSSLTAALAISNFASQTSERHNVPEIEAASSPELLLNPLTISRNENEK 60
Query: 61 VLIEGSINSVRISIAVKQADEIEKILCHKFMRFMMMRAENFIVLRRKPIEGYDISFLITN 120
VLIE S+NSVR+SI +KQADEIE IL HKF RF+ RAE+F +LRRKP++GYDISFLITN
Sbjct: 61 VLIEPSVNSVRVSIRIKQADEIEHILVHKFERFLTQRAESFFILRRKPVKGYDISFLITN 120
Query: 121 FHTEQMYKHKLVDFVLHFMEEIDKEISEMKLAVNARARICSEEFLKRF 168
FHTE M KHKLVDF+L FMEE+DKEISEMKL +NARAR +E FL F
Sbjct: 121 FHTEAMLKHKLVDFILQFMEEVDKEISEMKLFLNARARFVAESFLTPF 168
>POMBASE|SPAC6G9.07c [details] [associations]
symbol:arc4 "ARP2/3 actin-organizing complex subunit
Arc4" species:4896 "Schizosaccharomyces pombe" [GO:0000147 "actin
cortical patch assembly" evidence=IC] [GO:0003779 "actin binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0005885 "Arp2/3 protein complex"
evidence=IDA] [GO:0006897 "endocytosis" evidence=IC] [GO:0030479
"actin cortical patch" evidence=IDA] [GO:0034314 "Arp2/3
complex-mediated actin nucleation" evidence=IDA] InterPro:IPR008384
Pfam:PF05856 PomBase:SPAC6G9.07c GO:GO:0005829 GO:GO:0005634
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0006897 GO:GO:0030479
GO:GO:0000147 GO:GO:0030041 GO:GO:0005885 GO:GO:0034314 PDB:3DWL
PDBsum:3DWL eggNOG:NOG261545 HOGENOM:HOG000202303 KO:K05755
OMA:MCLENFS PANTHER:PTHR22629 EMBL:AB010050 PIR:T39069 PIR:T43309
RefSeq:NP_594116.1 ProteinModelPortal:Q92352 SMR:Q92352
IntAct:Q92352 STRING:Q92352 PRIDE:Q92352 EnsemblFungi:SPAC6G9.07c.1
GeneID:2541767 KEGG:spo:SPAC6G9.07c OrthoDB:EOG4J6W16
EvolutionaryTrace:Q92352 NextBio:20802858 Uniprot:Q92352
Length = 168
Score = 569 (205.4 bits), Expect = 3.7e-55, P = 3.7e-55
Identities = 107/168 (63%), Positives = 138/168 (82%)
Query: 1 MSSTLMPYLKVVRHTLNAAMCLENFSSQVVERHNKPEVEVRTSKELLLTPVLISRNEKEK 60
MS+TL PYL VR TL A++ LE FSS++VER ++PEVEV S E+LL P+++SRNE+E+
Sbjct: 1 MSNTLRPYLNAVRSTLTASLALEEFSSEIVERQSQPEVEVGRSPEILLKPLVVSRNEQEQ 60
Query: 61 VLIEGSINSVRISIAVKQADEIEKILCHKFMRFMMMRAENFIVLRRKPIEGYDISFLITN 120
LIE S+NSVR SI +KQ DEIE+IL KFM+F+M RAE+F +LRRKP++GYDISFLITN
Sbjct: 61 CLIESSVNSVRFSIRIKQVDEIERILVRKFMQFLMGRAESFFILRRKPVQGYDISFLITN 120
Query: 121 FHTEQMYKHKLVDFVLHFMEEIDKEISEMKLAVNARARICSEEFLKRF 168
+HTE+M KHKLVDF++ FMEE+D EISEMKL +N RAR+ +E +L F
Sbjct: 121 YHTEEMLKHKLVDFIIEFMEEVDAEISEMKLFLNGRARLVAETYLSCF 168
>SGD|S000001496 [details] [associations]
symbol:ARC19 "Subunit of the ARP2/3 complex" species:4932
"Saccharomyces cerevisiae" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0000001 "mitochondrion inheritance" evidence=TAS] [GO:0034314
"Arp2/3 complex-mediated actin nucleation" evidence=IEA]
[GO:0005885 "Arp2/3 protein complex" evidence=IEA;IDA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0003779 "actin binding"
evidence=IEA] [GO:0000147 "actin cortical patch assembly"
evidence=IMP] [GO:0030041 "actin filament polymerization"
evidence=IEA] [GO:0030479 "actin cortical patch" evidence=IEA]
[GO:0005198 "structural molecule activity" evidence=IMP]
InterPro:IPR008384 Pfam:PF05856 SGD:S000001496 GO:GO:0005198
EMBL:BK006944 GO:GO:0030479 GO:GO:0000001 GO:GO:0000147
GO:GO:0030041 GO:GO:0005885 eggNOG:NOG261545
GeneTree:ENSGT00390000016233 HOGENOM:HOG000202303 KO:K05755
OMA:MCLENFS PANTHER:PTHR22629 OrthoDB:EOG4J6W16 EMBL:X74152
EMBL:S53418 EMBL:Z28013 EMBL:AY558348 PIR:S37826 RefSeq:NP_012912.1
ProteinModelPortal:P33204 SMR:P33204 DIP:DIP-1819N IntAct:P33204
MINT:MINT-382542 STRING:P33204 PaxDb:P33204 PeptideAtlas:P33204
EnsemblFungi:YKL013C GeneID:853856 KEGG:sce:YKL013C CYGD:YKL013c
NextBio:975097 Genevestigator:P33204 GermOnline:YKL013C
Uniprot:P33204
Length = 171
Score = 541 (195.5 bits), Expect = 3.5e-52, P = 3.5e-52
Identities = 111/169 (65%), Positives = 132/169 (78%)
Query: 1 MSSTLMPYLKVVRHTLNAAMCLENFSSQVVERHNKPEVEV-RTSKELLLTPVLISRNEKE 59
MS +L PYL VR++L AA+ L NFSSQ VERHN+PEVEV TS ELLL P+ ISRNE E
Sbjct: 1 MSQSLRPYLTAVRYSLEAALTLSNFSSQEVERHNRPEVEVPNTSAELLLQPMHISRNENE 60
Query: 60 KVLIEGSINSVRISIAVKQADEIEKILCHKFMRFMMMRAENFIVLRRKPIEGYDISFLIT 119
+VLIE S+NSVR+S+ VKQADEIE+IL HKF RF+ RAE F +LRR PI GY ISFLIT
Sbjct: 61 QVLIEPSVNSVRMSLMVKQADEIEQILVHKFTRFLEQRAEAFYILRRVPIPGYSISFLIT 120
Query: 120 NFHTEQMYKHKLVDFVLHFMEEIDKEISEMKLAVNARARICSEEFLKRF 168
N HTE M KLVDF++ FME++DKEISE+KL +NARAR +E +L F
Sbjct: 121 NKHTESMKTGKLVDFIIEFMEDVDKEISEIKLFLNARARFVAEAYLDEF 169
>UNIPROTKB|F8WDD7 [details] [associations]
symbol:ARPC4 "Actin-related protein 2/3 complex subunit 4"
species:9606 "Homo sapiens" [GO:0005885 "Arp2/3 protein complex"
evidence=IEA] [GO:0030041 "actin filament polymerization"
evidence=IEA] [GO:0034314 "Arp2/3 complex-mediated actin
nucleation" evidence=IEA] InterPro:IPR008384 Pfam:PF05856
GO:GO:0005856 GO:GO:0030041 PANTHER:PTHR22629 HGNC:HGNC:707
ChiTaRS:ARPC4 EMBL:AC022382 IPI:IPI00926232
ProteinModelPortal:F8WDD7 SMR:F8WDD7 Ensembl:ENST00000440787
ArrayExpress:F8WDD7 Bgee:F8WDD7 Uniprot:F8WDD7
Length = 113
Score = 482 (174.7 bits), Expect = 6.2e-46, P = 6.2e-46
Identities = 95/110 (86%), Positives = 102/110 (92%)
Query: 1 MSSTLMPYLKVVRHTLNAAMCLENFSSQVVERHNKPEVEVRTSKELLLTPVLISRNEKEK 60
M++TL PYL VR TL AA+CLENFSSQVVERHNKPEVEVR+SKELLL PV ISRNEKEK
Sbjct: 1 MTATLRPYLSAVRATLQAALCLENFSSQVVERHNKPEVEVRSSKELLLQPVTISRNEKEK 60
Query: 61 VLIEGSINSVRISIAVKQADEIEKILCHKFMRFMMMRAENFIVLRRKPIE 110
VLIEGSINSVR+SIAVKQADEIEKILCHKFMRFMMMRAENF +LRRKP+E
Sbjct: 61 VLIEGSINSVRVSIAVKQADEIEKILCHKFMRFMMMRAENFFILRRKPVE 110
>UNIPROTKB|F6TTL5 [details] [associations]
symbol:ARPC4 "Actin-related protein 2/3 complex subunit 4"
species:9606 "Homo sapiens" [GO:0005885 "Arp2/3 protein complex"
evidence=IEA] [GO:0030041 "actin filament polymerization"
evidence=IEA] [GO:0034314 "Arp2/3 complex-mediated actin
nucleation" evidence=IEA] InterPro:IPR008384 Pfam:PF05856
GO:GO:0005856 GO:GO:0030041 CTD:10093 KO:K05755 PANTHER:PTHR22629
UniGene:Hs.323342 DNASU:10093 GeneID:10093 KEGG:hsa:10093
HGNC:HGNC:707 ChiTaRS:ARPC4 GenomeRNAi:10093 NextBio:38169
EMBL:AC022382 IPI:IPI00607772 RefSeq:NP_001020130.1
RefSeq:NP_001020131.1 SMR:F6TTL5 Ensembl:ENST00000287613
Ensembl:ENST00000498623 UCSC:uc003bta.2 Uniprot:F6TTL5
Length = 78
Score = 371 (135.7 bits), Expect = 3.6e-34, P = 3.6e-34
Identities = 70/78 (89%), Positives = 75/78 (96%)
Query: 91 MRFMMMRAENFIVLRRKPIEGYDISFLITNFHTEQMYKHKLVDFVLHFMEEIDKEISEMK 150
MRFMMMRAENF +LRRKP+EGYDISFLITNFHTEQMYKHKLVDFV+HFMEEIDKEISEMK
Sbjct: 1 MRFMMMRAENFFILRRKPVEGYDISFLITNFHTEQMYKHKLVDFVIHFMEEIDKEISEMK 60
Query: 151 LAVNARARICSEEFLKRF 168
L+VNARARI +EEFLK F
Sbjct: 61 LSVNARARIVAEEFLKNF 78
>UNIPROTKB|H7C0A3 [details] [associations]
symbol:ARPC4-TTLL3 "Protein ARPC4-TTLL3" species:9606 "Homo
sapiens" [GO:0005885 "Arp2/3 protein complex" evidence=IEA]
[GO:0030041 "actin filament polymerization" evidence=IEA]
[GO:0034314 "Arp2/3 complex-mediated actin nucleation"
evidence=IEA] InterPro:IPR008384 Pfam:PF05856 GO:GO:0005856
GO:GO:0030041 PANTHER:PTHR22629 EMBL:AC022382
ProteinModelPortal:H7C0A3 Ensembl:ENST00000453882 HGNC:HGNC:38830
ChiTaRS:ARPC4-TTLL3 Uniprot:H7C0A3
Length = 167
Score = 322 (118.4 bits), Expect = 5.6e-29, P = 5.6e-29
Identities = 66/85 (77%), Positives = 74/85 (87%)
Query: 2 SSTLMPYLKVVRHTLNAAMCLENFSSQVVERHNKPEVEVRTSKELLLTPVLISRNEKEKV 61
++TL PYL VR TL AA+CLENFSSQVVERHNKPEVEVR+SKELLL PV ISRNEKEKV
Sbjct: 2 TATLRPYLSAVRATLQAALCLENFSSQVVERHNKPEVEVRSSKELLLQPVTISRNEKEKV 61
Query: 62 LIEGSINSVRISIAVKQADEIEKIL 86
LIEGSINSVR+SIAVKQ +I ++
Sbjct: 62 LIEGSINSVRVSIAVKQGYDISFLI 86
Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
Identities = 61/115 (53%), Positives = 81/115 (70%)
Query: 52 LISRNEKEKVLIEGSINSVRISIAVKQADEIEKILCHKFMRFMMMRAENFIVLRRKPIEG 111
++ R+ K +V + S + + + + +E EK+L + + + I ++ +G
Sbjct: 29 VVERHNKPEVEVRSSKELLLQPVTISR-NEKEKVLIEGSINSVRVS----IAVK----QG 79
Query: 112 YDISFLITNFHTEQMYKHKLVDFVLHFMEEIDKEISEMKLAVNARARICSEEFLK 166
YDISFLITNFHTEQMYKHKLVDFV+HFMEEIDKEISEMKL+VNARARI +EEFLK
Sbjct: 80 YDISFLITNFHTEQMYKHKLVDFVIHFMEEIDKEISEMKLSVNARARIVAEEFLK 134
>UNIPROTKB|F8WE39 [details] [associations]
symbol:ARPC4 "Actin-related protein 2/3 complex subunit 4"
species:9606 "Homo sapiens" [GO:0005885 "Arp2/3 protein complex"
evidence=IEA] [GO:0030041 "actin filament polymerization"
evidence=IEA] [GO:0034314 "Arp2/3 complex-mediated actin
nucleation" evidence=IEA] InterPro:IPR008384 Pfam:PF05856
GO:GO:0005856 GO:GO:0030041 PANTHER:PTHR22629 HGNC:HGNC:707
ChiTaRS:ARPC4 EMBL:AC022382 IPI:IPI00924833
ProteinModelPortal:F8WE39 SMR:F8WE39 Ensembl:ENST00000418163
ArrayExpress:F8WE39 Bgee:F8WE39 Uniprot:F8WE39
Length = 47
Score = 169 (64.5 bits), Expect = 9.1e-13, P = 9.1e-13
Identities = 33/41 (80%), Positives = 36/41 (87%)
Query: 1 MSSTLMPYLKVVRHTLNAAMCLENFSSQVVERHNKPEVEVR 41
M++TL PYL VR TL AA+CLENFSSQVVERHNKPEVEVR
Sbjct: 1 MTATLRPYLSAVRATLQAALCLENFSSQVVERHNKPEVEVR 41
>UNIPROTKB|F8WDW3 [details] [associations]
symbol:ARPC4 "Actin-related protein 2/3 complex subunit 4"
species:9606 "Homo sapiens" [GO:0005885 "Arp2/3 protein complex"
evidence=IEA] [GO:0030041 "actin filament polymerization"
evidence=IEA] [GO:0034314 "Arp2/3 complex-mediated actin
nucleation" evidence=IEA] InterPro:IPR008384 Pfam:PF05856
GO:GO:0005856 GO:GO:0030041 PANTHER:PTHR22629 HGNC:HGNC:707
ChiTaRS:ARPC4 EMBL:AC022382 IPI:IPI00925522
ProteinModelPortal:F8WDW3 SMR:F8WDW3 Ensembl:ENST00000417500
ArrayExpress:F8WDW3 Bgee:F8WDW3 Uniprot:F8WDW3
Length = 44
Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 32/40 (80%), Positives = 35/40 (87%)
Query: 1 MSSTLMPYLKVVRHTLNAAMCLENFSSQVVERHNKPEVEV 40
M++TL PYL VR TL AA+CLENFSSQVVERHNKPEVEV
Sbjct: 1 MTATLRPYLSAVRATLQAALCLENFSSQVVERHNKPEVEV 40
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.325 0.136 0.375 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 168 168 0.00079 108 3 10 22 0.45 31
31 0.46 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 20
No. of states in DFA: 589 (63 KB)
Total size of DFA: 183 KB (2105 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 25.23u 0.07s 25.30t Elapsed: 00:00:25
Total cpu time: 25.23u 0.07s 25.30t Elapsed: 00:00:25
Start: Thu Aug 15 12:14:48 2013 End: Thu Aug 15 12:15:13 2013