BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9054
(156 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q28678|ICLN_RABIT Methylosome subunit pICln OS=Oryctolagus cuniculus GN=CLNS1A PE=2
SV=2
Length = 236
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/131 (48%), Positives = 87/131 (66%), Gaps = 4/131 (3%)
Query: 15 PEPSGNVLHQEPATTAYIENENLGTGTLYIAESKLQWTNSSSGLGFALEYPRITIHAISR 74
P P+ + HQ+P T A + + LGTGTLYIAES+L W + S GLGF+LEYP I++HA+SR
Sbjct: 10 PGPTEGLRHQQPDTEAVLNGKGLGTGTLYIAESRLSWLDGS-GLGFSLEYPTISLHAVSR 68
Query: 75 DTNHFAEECIYLQVEREKSDEGDGAGGDIGDEEDDDDDDEGSMIEIRLVPQDKTALEDIF 134
D N + +E +Y+ V + +E + DEE+D DDD + E R VP DK+ALE +F
Sbjct: 69 DPNAYPQEHLYVMVNAKFGEESKEL---VADEEEDSDDDVEPISEFRFVPGDKSALEAMF 125
Query: 135 MAMNQCQKLHP 145
AM +CQ LHP
Sbjct: 126 TAMCECQALHP 136
>sp|P54106|ICLN_XENLA Methylosome subunit pICln OS=Xenopus laevis GN=clns1a PE=2 SV=1
Length = 241
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/138 (47%), Positives = 87/138 (63%), Gaps = 4/138 (2%)
Query: 11 LSNLPEPSGNVLHQEPATTAYIENENLGTGTLYIAESKLQWTNSSSGLGFALEYPRITIH 70
LS+ P P+ V +P T A + LG GTLYIAES+L W N S GLGF+LEYP I++H
Sbjct: 4 LSSFPPPADGVRRLQPGTEAVVGGRGLGPGTLYIAESRLSWLNGS-GLGFSLEYPSISLH 62
Query: 71 AISRDTNHFAEECIYLQVEREKSDEGDG---AGGDIGDEEDDDDDDEGSMIEIRLVPQDK 127
AISRDT + EE +Y+ V + +D+ D +E +DDDDDE + EIR VP +K
Sbjct: 63 AISRDTAAYPEEHLYVMVNSKLADKEDKEAHMADQEEEESEDDDDDEEPITEIRFVPGEK 122
Query: 128 TALEDIFMAMNQCQKLHP 145
+ L ++F AM CQ LHP
Sbjct: 123 SDLGEMFSAMCDCQALHP 140
>sp|P35521|ICLN_CANFA Methylosome subunit pICln OS=Canis familiaris GN=CLNS1A PE=1 SV=1
Length = 235
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/137 (45%), Positives = 85/137 (62%), Gaps = 7/137 (5%)
Query: 11 LSNLPEPSG--NVLHQEPATTAYIENENLGTGTLYIAESKLQWTNSSSGLGFALEYPRIT 68
L + P P + Q+P T A + + LGTGTLYIAES+L W + S GLGF+LEYP I+
Sbjct: 4 LKSFPPPGSAEGLRQQQPETEAVLNGKGLGTGTLYIAESRLSWLDGS-GLGFSLEYPTIS 62
Query: 69 IHAISRDTNHFAEECIYLQVEREKSDEGDGAGGDIGDEEDDDDDDEGSMIEIRLVPQDKT 128
+HA+SRD N + E +Y+ V + +E + + E+D DDD + E R VP DK+
Sbjct: 63 LHAVSRDLNAYPREHLYVMVNAKFGEESKESVAE----EEDSDDDVEPIAEFRFVPSDKS 118
Query: 129 ALEDIFMAMNQCQKLHP 145
ALE +F AM +CQ LHP
Sbjct: 119 ALEAMFTAMCECQALHP 135
>sp|Q04753|ICLN_RAT Methylosome subunit pICln OS=Rattus norvegicus GN=Clns1a PE=2 SV=1
Length = 236
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/137 (45%), Positives = 88/137 (64%), Gaps = 6/137 (4%)
Query: 11 LSNLPEPSG--NVLHQEPATTAYIENENLGTGTLYIAESKLQWTNSSSGLGFALEYPRIT 68
L + P P + Q+P T A + + LGTGTLYIAES+L W + S GLGF+LEYP I+
Sbjct: 4 LKSFPPPGSADGLRLQQPDTEAVLNGKGLGTGTLYIAESRLSWLDGS-GLGFSLEYPTIS 62
Query: 69 IHAISRDTNHFAEECIYLQVEREKSDEGDGAGGDIGDEEDDDDDDEGSMIEIRLVPQDKT 128
+HA+SRD N + +E +Y+ V + G+ + DE++DD+DD + E R VP DK+
Sbjct: 63 LHAVSRDPNAYPQEHLYVMV---NARFGEESKEPFSDEDEDDNDDVEPISEFRFVPSDKS 119
Query: 129 ALEDIFMAMNQCQKLHP 145
ALE +F AM +CQ LHP
Sbjct: 120 ALEAMFTAMCECQALHP 136
>sp|Q61189|ICLN_MOUSE Methylosome subunit pICln OS=Mus musculus GN=Clns1a PE=1 SV=1
Length = 236
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/137 (45%), Positives = 87/137 (63%), Gaps = 6/137 (4%)
Query: 11 LSNLPEPSG--NVLHQEPATTAYIENENLGTGTLYIAESKLQWTNSSSGLGFALEYPRIT 68
L + P P + Q+P T A + + LGTGTLYIAES+L W + S GLGF+LEYP I+
Sbjct: 4 LKSFPPPGSADGLRLQQPDTEAVLNGKGLGTGTLYIAESRLSWLDGS-GLGFSLEYPTIS 62
Query: 69 IHAISRDTNHFAEECIYLQVEREKSDEGDGAGGDIGDEEDDDDDDEGSMIEIRLVPQDKT 128
+HA+SRD N + +E +Y+ V + +E D E+++D+DD + E R VP DK+
Sbjct: 63 LHAVSRDPNAYPQEHLYVMVNAKLGEESKEPPSD---EDEEDNDDIEPISEFRFVPSDKS 119
Query: 129 ALEDIFMAMNQCQKLHP 145
ALE +F AM +CQ LHP
Sbjct: 120 ALEAMFTAMCECQALHP 136
>sp|P54105|ICLN_HUMAN Methylosome subunit pICln OS=Homo sapiens GN=CLNS1A PE=1 SV=1
Length = 237
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/131 (48%), Positives = 85/131 (64%), Gaps = 3/131 (2%)
Query: 15 PEPSGNVLHQEPATTAYIENENLGTGTLYIAESKLQWTNSSSGLGFALEYPRITIHAISR 74
P P+ +L Q+P T A + + LGTGTLYIAES+L W + S GLGF+LEYP I++HA+SR
Sbjct: 10 PGPAEGLLRQQPDTEAVLNGKGLGTGTLYIAESRLSWLDGS-GLGFSLEYPTISLHALSR 68
Query: 75 DTNHFAEECIYLQVEREKSDEGDGAGGDIGDEEDDDDDDEGSMIEIRLVPQDKTALEDIF 134
D + E +Y+ V + +E D +EE+D DDD + E R VP DK+ALE +F
Sbjct: 69 DRSDCLGEHLYVMVNAKFEEESKEPVAD--EEEEDSDDDVEPITEFRFVPSDKSALEAMF 126
Query: 135 MAMNQCQKLHP 145
AM +CQ LHP
Sbjct: 127 TAMCECQALHP 137
>sp|Q5R719|ICLN_PONAB Methylosome subunit pICln OS=Pongo abelii GN=CLNS1A PE=2 SV=1
Length = 237
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/131 (48%), Positives = 85/131 (64%), Gaps = 3/131 (2%)
Query: 15 PEPSGNVLHQEPATTAYIENENLGTGTLYIAESKLQWTNSSSGLGFALEYPRITIHAISR 74
P P+ +L Q+P T A + + LGTGTLYIAES+L W + S GLGF+LEYP I++HA+SR
Sbjct: 10 PGPAEGLLRQQPDTEAVLNGKGLGTGTLYIAESRLSWLDGS-GLGFSLEYPTISLHALSR 68
Query: 75 DTNHFAEECIYLQVEREKSDEGDGAGGDIGDEEDDDDDDEGSMIEIRLVPQDKTALEDIF 134
D + E +Y+ V + +E D +EE+D DDD + E R VP DK+ALE +F
Sbjct: 69 DRSDCLGEHLYVMVNAKFEEESKEPVAD--EEEEDSDDDVEPITEFRFVPSDKSALEAMF 126
Query: 135 MAMNQCQKLHP 145
AM +CQ LHP
Sbjct: 127 TAMCECQALHP 137
>sp|Q9LVA7|ICLN_ARATH Chloride conductance regulatory protein ICln OS=Arabidopsis
thaliana GN=At5g62290 PE=2 SV=1
Length = 229
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 72/138 (52%), Gaps = 8/138 (5%)
Query: 21 VLHQEPATTAYIENENLGT-GTLYIAESKLQW-TNSSSGLGFALEYPRITIHAISRDTNH 78
++H + + + N + + GTLYI KL W ++ G+A+++ I++HA+SRD
Sbjct: 29 LMHVQTSVAVALGNRPIESPGTLYITSRKLIWLSDVDMAKGYAVDFLSISLHAVSRDPEA 88
Query: 79 FAEECIYLQVEREKSDEGDGAGGDIGDEEDDDDDDEGSMIEIRLVPQDKTALEDIFMAMN 138
++ CIY Q+E E+ ++ + D + E+RLVP D T LE +F
Sbjct: 89 YSSPCIYTQIEVEEDEDDESDSESTEVL------DLSKIREMRLVPSDSTQLETLFDVFC 142
Query: 139 QCQKLHPDPDQSPLSGNG 156
+C +L+P+P Q +G
Sbjct: 143 ECAELNPEPVQEEEEESG 160
>sp|A5DVG6|LOT5_LODEL Protein LOT5 OS=Lodderomyces elongisporus (strain ATCC 11503 / CBS
2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) GN=LOT5 PE=3
SV=1
Length = 244
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 54/127 (42%), Gaps = 37/127 (29%)
Query: 32 IENENLGTGTLYIAESKLQWTNSSSGLGFALEYPRITIHAISRDTNHFAEECIYLQVERE 91
+ N L ++++ S + + GLGF + Y I +HA+ DT +YLQ+E
Sbjct: 55 LRNFTLDQCSIFVLSSCFIIWSETDGLGFEIPYQSIYLHALD-DTG-----MLYLQIENN 108
Query: 92 KSDEGDGAGGDIGDEEDDDDDDEGSMIEIRLVP--QDKTALE------------DIFMAM 137
+ E D + +E+RL+P +D ++L DI+ AM
Sbjct: 109 RLHESDE-----------------NTVELRLLPNQEDSSSLSNPLFREMNGGALDIYHAM 151
Query: 138 NQCQKLH 144
N C +H
Sbjct: 152 NTCSAMH 158
>sp|A3LX72|LOT5_PICST Protein LOT5 OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS
6054 / NBRC 10063 / NRRL Y-11545) GN=LOT5 PE=3 SV=2
Length = 282
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 60/147 (40%), Gaps = 29/147 (19%)
Query: 24 QEPATTAYIENENLGTGTLYIAESKLQWTNSSSGLGFALEYPRITIHAISRDTNHFAEEC 83
QE +E+ + +L++ + L +S+ LG L Y I +HA+ ++ +
Sbjct: 59 QELVVCPELESVDYSNVSLFVLNTSLIVWFNSADLGLELPYQSIILHALHTLSD---DTF 115
Query: 84 IYLQVEREKSDEGDGAGGDIGDEEDDDDDDEGSMIEIRLVPQDK---------------- 127
+YLQ+ + +G + IEIR+V DK
Sbjct: 116 LYLQILSNECITSIPSGTT----------EFVPSIEIRIVKNDKPGNPLNDNPLLVHNSN 165
Query: 128 TALEDIFMAMNQCQKLHPDPDQSPLSG 154
+++E ++ AM++C H D D SG
Sbjct: 166 SSIETVYEAMSKCSAFHFDSDSEDESG 192
>sp|A5DN53|LOT5_PICGU Protein LOT5 OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS
566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324)
GN=LOT5 PE=3 SV=2
Length = 254
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 51/124 (41%), Gaps = 22/124 (17%)
Query: 42 LYIAESKLQWTNSSSGLGFALEYPRITIHAISRDTNHFAEECIYLQVEREKSDEGDGAGG 101
LY+ S L +++ G + Y +I +HA+ + ++ +YLQ+ G
Sbjct: 80 LYVLNSCLLLWSATHKFGVEVPYQKIVLHALQHQQD---QDVLYLQLR----------PG 126
Query: 102 DIGDEEDDDDDDEGSMIEIR---------LVPQDKTALEDIFMAMNQCQKLHPDPDQSPL 152
+ + + + D + I I+ + P + I+ M QC LH D D+S
Sbjct: 127 EQLNAKTESDYEPYIEITIKSSEPHSGLAICPPGTDTIPAIYDGMAQCSALHADEDESTE 186
Query: 153 SGNG 156
NG
Sbjct: 187 EDNG 190
>sp|A8FYK0|RLMM_SHESH Ribosomal RNA large subunit methyltransferase M OS=Shewanella
sediminis (strain HAW-EB3) GN=rlmM PE=3 SV=1
Length = 360
Score = 31.6 bits (70), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 4/89 (4%)
Query: 4 RTFQSIPLSNLPEPSGNVLHQEPATTAYIENENLGTGTLYIAESKLQWTNSSSGLGFALE 63
R F ++PL + SGN+L +E ++ I + +GT Y+ S ++N+SS +
Sbjct: 120 RKF-TVPLRQKLKNSGNLLKKESSSRPIIHVCFVASGTAYVGFS---FSNNSSPYPMGIP 175
Query: 64 YPRITIHAISRDTNHFAEECIYLQVEREK 92
++ A SR T E I+ E EK
Sbjct: 176 RLKMASDAPSRSTLKLDEAFIHFIPEEEK 204
>sp|P98157|LRP1_CHICK Low-density lipoprotein receptor-related protein 1 OS=Gallus gallus
GN=LRP1 PE=2 SV=1
Length = 4543
Score = 31.6 bits (70), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/69 (21%), Positives = 33/69 (47%)
Query: 5 TFQSIPLSNLPEPSGNVLHQEPATTAYIENENLGTGTLYIAESKLQWTNSSSGLGFALEY 64
+F++ + L +P V+H + + +N+ + + L +TN +G A++Y
Sbjct: 1690 SFKNAVIQGLDKPHCLVVHPLHGKLYWTDGDNISVANMDGSNRTLLFTNQRGPVGLAIDY 1749
Query: 65 PRITIHAIS 73
P ++ IS
Sbjct: 1750 PESKLYWIS 1758
>sp|Q555D2|Y6503_DICDI Uncharacterized protein DDB_G0274915 OS=Dictyostelium discoideum
GN=DDB_G0274915 PE=4 SV=2
Length = 1839
Score = 31.2 bits (69), Expect = 2.6, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 4/61 (6%)
Query: 80 AEECIYLQVEREKSDEGDGAGGDIGDEED----DDDDDEGSMIEIRLVPQDKTALEDIFM 135
AEE Y+ + ++ +EGDG GGD+ EE+ D D+E + Q T L +F
Sbjct: 921 AEEAFYVPPDSDEENEGDGNGGDLEAEEEFYVPPDSDEEKEKEKKPKTKQQSTQLTGLFA 980
Query: 136 A 136
A
Sbjct: 981 A 981
>sp|O13777|YIU1_SCHPO Uncharacterized protein C1610.01 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC1610.01 PE=4 SV=1
Length = 217
Score = 30.8 bits (68), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 64/146 (43%), Gaps = 24/146 (16%)
Query: 17 PSGNVLHQEPATTAYI---ENENLGTG---TLYIAESKLQWTNSSSGLGFALEYPRITIH 70
P+ +++ E T Y + E+ G TL + + G+ + Y IT+H
Sbjct: 24 PNQEIVYFEEKTVPYKIRSDEESFPLGKLITLLVTSQSFILFDEEQNSGWKIPYETITLH 83
Query: 71 AI-SRDTNHFAEECIYLQVEREKSD-------EGDGAGGDIGDEEDDDDDDEGS--MIEI 120
A S+D + +Y+Q+E E + + + G + + +D++E + +E+
Sbjct: 84 AKQSKDKPY-----VYVQLEGEAIRPLLDHILKFERSSGTLHEAPSTEDENEFTDDFLEL 138
Query: 121 RLVPQDKTALEDIFMAMNQCQKLHPD 146
L D ++ + A+ CQ LHPD
Sbjct: 139 TLYVTD---VDSCYQALCTCQSLHPD 161
>sp|Q07954|LRP1_HUMAN Prolow-density lipoprotein receptor-related protein 1 OS=Homo sapiens
GN=LRP1 PE=1 SV=2
Length = 4544
Score = 30.4 bits (67), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 16/79 (20%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
Query: 5 TFQSIPLSNLPEPSGNVLHQEPATTAYIENENLGTGTLYIAESKLQWTNSSSGLGFALEY 64
+F++ + L +P G V+H + + +N+ + + L ++ +G A+++
Sbjct: 1692 SFKNAVVQGLEQPHGLVVHPLRGKLYWTDGDNISMANMDGSNRTLLFSGQKGPVGLAIDF 1751
Query: 65 PRITIHAISRDTNHFAEEC 83
P ++ IS NH C
Sbjct: 1752 PESKLYWIS-SGNHTINRC 1769
>sp|Q91ZX7|LRP1_MOUSE Prolow-density lipoprotein receptor-related protein 1 OS=Mus musculus
GN=Lrp1 PE=1 SV=1
Length = 4545
Score = 30.4 bits (67), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 16/79 (20%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
Query: 5 TFQSIPLSNLPEPSGNVLHQEPATTAYIENENLGTGTLYIAESKLQWTNSSSGLGFALEY 64
+F++ + L +P G V+H + + +N+ + + L ++ +G A+++
Sbjct: 1693 SFKNAVVQGLEQPHGLVVHPLRGKLYWTDGDNISMANMDGSNHTLLFSGQKGPVGLAIDF 1752
Query: 65 PRITIHAISRDTNHFAEEC 83
P ++ IS NH C
Sbjct: 1753 PESKLYWIS-SGNHTINRC 1770
>sp|Q6VAB6|KSR2_HUMAN Kinase suppressor of Ras 2 OS=Homo sapiens GN=KSR2 PE=1 SV=2
Length = 950
Score = 30.0 bits (66), Expect = 5.4, Method: Composition-based stats.
Identities = 26/114 (22%), Positives = 49/114 (42%), Gaps = 3/114 (2%)
Query: 22 LHQEPATTAYIENENLGTGTLYIAESKLQWTNSSSGLGFALEYPRITIHAISRDTNHFAE 81
LH P T +N NL Y + + + + P++ +H ++ +N E
Sbjct: 546 LHPSPQCTRQQKNFNLPASHYYKYKQQFIFPDVVPVPETPTRAPQVILHPVT--SNPILE 603
Query: 82 ECIYLQVEREKSDEGDGAGGDIGDEEDDDDDDEGSMIEIRLVPQDKTALEDIFM 135
LQ+E E + E + + + EDD ++ S++ R P+ K + IF+
Sbjct: 604 GNPLLQIEVEPTSENEEVHDEAEESEDDFEEMNLSLLSARSFPR-KASQTSIFL 656
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.311 0.133 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 67,684,734
Number of Sequences: 539616
Number of extensions: 3071310
Number of successful extensions: 19094
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 167
Number of HSP's successfully gapped in prelim test: 109
Number of HSP's that attempted gapping in prelim test: 16800
Number of HSP's gapped (non-prelim): 1700
length of query: 156
length of database: 191,569,459
effective HSP length: 107
effective length of query: 49
effective length of database: 133,830,547
effective search space: 6557696803
effective search space used: 6557696803
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 56 (26.2 bits)