Query psy9055
Match_columns 284
No_of_seqs 157 out of 466
Neff 6.0
Searched_HMMs 29240
Date Fri Aug 16 17:48:14 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9055.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9055hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3bq3_A Defective in cullin ned 100.0 6.3E-83 2.2E-87 587.3 19.4 244 3-272 10-269 (270)
2 3tdu_A DCN1-like protein 1; E2 100.0 3.2E-75 1.1E-79 515.0 18.4 196 60-278 2-197 (200)
3 3kev_A Galieria sulfuraria DCU 100.0 9.8E-74 3.3E-78 505.2 19.6 193 58-275 3-195 (199)
4 4gba_A DCN1-like protein 3; E3 100.0 1.6E-72 5.6E-77 503.8 19.3 197 58-278 2-203 (221)
5 1v92_A NSFL1 cofactor P47; 3-h 99.3 1.4E-12 4.9E-17 88.5 5.0 44 5-48 2-45 (46)
6 2dam_A ETEA protein; KIAA0887, 99.3 2.5E-12 8.6E-17 94.7 4.6 49 1-49 11-60 (67)
7 3e21_A HFAF1, FAS-associated f 99.3 3.4E-12 1.2E-16 86.9 3.9 42 5-46 2-44 (45)
8 2dal_A Protein KIAA0794; FAS a 99.2 5.9E-12 2E-16 91.2 5.1 47 3-49 10-56 (62)
9 2dzl_A Protein FAM100B; UBA-li 99.2 1.8E-11 6.1E-16 89.9 5.8 46 4-49 11-58 (66)
10 2jp7_A MRNA export factor MEX6 97.8 2.4E-05 8.1E-10 55.6 5.0 45 3-47 1-45 (57)
11 1oai_A Nuclear RNA export fact 97.8 3.1E-05 1.1E-09 55.3 5.2 43 4-46 3-45 (59)
12 1z96_A DNA-damage, UBA-domain 97.5 0.00019 6.6E-09 46.3 5.3 39 6-45 2-40 (40)
13 4gew_A 5'-tyrosyl-DNA phosphod 97.3 0.00012 4.1E-09 68.7 4.3 42 7-48 44-85 (362)
14 1wj7_A Hypothetical protein (R 97.1 0.00059 2E-08 53.9 4.9 43 7-49 38-80 (104)
15 2l2d_A OTU domain-containing p 96.8 0.0024 8.4E-08 46.0 5.7 42 4-45 13-54 (73)
16 1qx2_A Vitamin D-dependent cal 96.4 0.0072 2.5E-07 42.2 6.2 68 61-128 4-74 (76)
17 3ox6_A Calcium-binding protein 96.2 0.097 3.3E-06 40.4 12.4 67 61-128 10-76 (153)
18 1avs_A Troponin C; muscle cont 96.1 0.026 8.8E-07 41.1 8.0 67 61-128 19-85 (90)
19 2ktg_A Calmodulin, putative; e 96.0 0.022 7.6E-07 40.7 7.1 68 60-128 12-79 (85)
20 2b1u_A Calmodulin-like protein 96.0 0.0068 2.3E-07 41.7 4.1 67 60-127 4-70 (71)
21 1dv0_A DNA repair protein HHR2 96.0 0.005 1.7E-07 41.6 3.3 42 6-48 2-43 (47)
22 2kn2_A Calmodulin; S MAPK phos 96.0 0.053 1.8E-06 39.3 9.2 70 60-130 7-76 (92)
23 1tiz_A Calmodulin-related prot 95.9 0.024 8.3E-07 38.3 6.4 64 63-127 2-65 (67)
24 2g3q_A Protein YBL047C; endocy 95.7 0.016 5.5E-07 38.0 4.7 39 8-47 4-42 (43)
25 2joj_A Centrin protein; N-term 95.7 0.026 8.7E-07 39.4 6.1 66 61-127 6-71 (77)
26 3qrx_A Centrin; calcium-bindin 95.7 0.48 1.6E-05 37.4 14.5 68 60-128 26-93 (169)
27 3sjs_A URE3-BP sequence specif 95.6 0.057 2E-06 46.2 9.3 67 61-128 50-116 (220)
28 1vg5_A RSGI RUH-014, rhomboid 95.6 0.019 6.5E-07 42.4 5.2 43 5-48 26-68 (73)
29 2opo_A Polcalcin CHE A 3; calc 95.6 0.073 2.5E-06 38.0 8.4 67 60-128 9-75 (86)
30 2ccm_A Calexcitin; EF hand, ca 95.6 0.62 2.1E-05 37.7 15.2 69 60-128 10-93 (191)
31 1ify_A HHR23A, UV excision rep 95.6 0.017 5.7E-07 39.3 4.5 40 7-47 7-46 (49)
32 1jkg_B TAP; NTF2-like domain, 95.5 0.0022 7.5E-08 57.7 0.0 45 4-48 194-238 (250)
33 2kz2_A Calmodulin, CAM; TR2C, 95.5 0.083 2.9E-06 39.2 8.9 67 59-126 26-92 (94)
34 4ds7_A Calmodulin, CAM; protei 95.5 0.26 8.8E-06 37.7 11.9 68 60-128 9-76 (147)
35 2jy5_A Ubiquilin-1; UBA, alter 95.4 0.023 7.9E-07 39.1 4.9 39 9-48 13-52 (52)
36 2lv7_A Calcium-binding protein 95.2 0.071 2.4E-06 40.6 7.6 65 60-125 34-98 (100)
37 1c7v_A CAVP, calcium vector pr 95.2 0.035 1.2E-06 39.3 5.5 69 60-130 7-76 (81)
38 1veg_A NEDD8 ultimate buster-1 95.2 0.026 9E-07 42.7 4.9 40 8-48 29-68 (83)
39 3fwb_A Cell division control p 95.1 0.29 1E-05 38.1 11.4 67 60-127 21-87 (161)
40 1j7q_A CAVP, calcium vector pr 95.1 0.09 3.1E-06 37.6 7.5 66 60-127 12-80 (86)
41 1k9u_A Polcalcin PHL P 7; poll 95.1 0.054 1.8E-06 38.0 6.1 65 62-128 3-67 (78)
42 2hpk_A Photoprotein berovin; s 95.0 0.37 1.3E-05 39.9 12.3 64 62-126 36-108 (208)
43 2mys_C Myosin; muscle protein, 95.0 0.088 3E-06 40.6 7.9 66 61-128 7-75 (149)
44 2znd_A Programmed cell death p 94.9 0.28 9.7E-06 39.2 10.8 68 60-128 5-73 (172)
45 1y1x_A Leishmania major homolo 94.8 0.5 1.7E-05 38.9 12.4 68 60-128 25-92 (191)
46 1yx7_A Calsensin, LAN3-6 antig 94.8 0.068 2.3E-06 37.8 6.1 67 61-128 6-78 (83)
47 2lmt_A Calmodulin-related prot 94.8 0.29 9.9E-06 38.6 10.5 125 1-126 1-146 (148)
48 2dkl_A Trinucleotide repeat co 94.7 0.049 1.7E-06 41.3 5.4 39 9-48 22-60 (85)
49 1top_A Troponin C; contractIle 94.7 0.13 4.3E-06 40.4 8.1 69 60-129 94-162 (162)
50 2d58_A Allograft inflammatory 94.7 0.096 3.3E-06 39.4 7.1 68 61-129 31-98 (107)
51 1top_A Troponin C; contractIle 94.6 0.8 2.7E-05 35.6 12.7 67 61-128 19-85 (162)
52 1dtl_A Cardiac troponin C; hel 94.6 0.14 4.7E-06 40.2 8.0 68 60-128 16-84 (161)
53 1nya_A Calerythrin; EF-hand, m 94.5 0.15 5E-06 40.5 8.3 68 61-129 6-88 (176)
54 1wlz_A DJBP, CAP-binding prote 94.5 0.11 3.7E-06 38.6 6.9 68 61-129 23-90 (105)
55 3fwb_A Cell division control p 94.5 0.15 5.1E-06 39.9 8.1 67 60-127 94-160 (161)
56 2bl0_C Myosin regulatory light 94.4 0.11 3.9E-06 39.9 7.1 66 61-127 5-70 (142)
57 2sas_A Sarcoplasmic calcium-bi 94.4 0.72 2.4E-05 36.6 12.2 69 60-128 6-89 (185)
58 3akb_A Putative calcium bindin 94.4 0.98 3.4E-05 35.1 12.8 67 61-128 3-84 (166)
59 1wiv_A UBP14, ubiquitin-specif 94.4 0.058 2E-06 39.7 5.0 41 8-49 29-69 (73)
60 3li6_A Calcium-binding protein 94.3 0.017 5.8E-07 39.1 1.9 63 65-128 3-65 (66)
61 1wji_A Tudor domain containing 94.2 0.051 1.7E-06 38.8 4.2 40 8-48 9-48 (63)
62 3ll8_B Calcineurin subunit B t 94.2 0.13 4.5E-06 39.9 7.1 72 59-131 72-148 (155)
63 2jnf_A Troponin C; stretch act 94.1 0.16 5.3E-06 39.8 7.5 68 61-128 12-79 (158)
64 5pal_A Parvalbumin; calcium-bi 94.1 0.19 6.4E-06 37.4 7.6 67 60-127 39-108 (109)
65 3mse_B Calcium-dependent prote 94.1 0.47 1.6E-05 38.5 10.6 66 61-129 38-103 (180)
66 2dah_A Ubiquilin-3; UBA domain 94.1 0.035 1.2E-06 38.5 3.0 40 9-49 10-50 (54)
67 2f33_A Calbindin; EF-hand, Ca2 94.0 0.39 1.3E-05 40.7 10.3 68 59-127 13-86 (263)
68 2f2o_A Calmodulin fused with c 94.0 0.27 9.1E-06 39.4 8.7 68 60-128 9-76 (179)
69 2pmy_A RAS and EF-hand domain- 94.0 0.18 6.1E-06 36.9 7.0 65 61-128 26-90 (91)
70 2dak_A Ubiquitin carboxyl-term 93.9 0.074 2.5E-06 37.8 4.5 39 8-47 9-47 (63)
71 2pvb_A Protein (parvalbumin); 93.8 0.2 7E-06 37.1 7.3 66 60-126 39-107 (108)
72 2knz_A Ubiquilin-4; cytoplasm, 93.8 0.082 2.8E-06 36.3 4.5 39 9-48 12-51 (53)
73 3qrx_A Centrin; calcium-bindin 93.8 0.22 7.7E-06 39.3 7.8 66 61-127 100-165 (169)
74 3rm1_A Protein S100-B; alpha-h 93.7 0.38 1.3E-05 35.4 8.6 68 62-129 9-82 (92)
75 4ds7_A Calmodulin, CAM; protei 93.7 0.17 5.8E-06 38.8 6.8 65 60-126 82-146 (147)
76 1rwy_A Parvalbumin alpha; EF-h 93.6 0.22 7.6E-06 36.9 7.2 67 60-127 39-108 (109)
77 1jba_A GCAP-2, protein (guanyl 93.6 1.2 3.9E-05 36.7 12.3 73 58-130 18-90 (204)
78 3ox6_A Calcium-binding protein 93.6 0.18 6.2E-06 38.8 6.9 123 3-126 4-152 (153)
79 2ekk_A UBA domain from E3 ubiq 93.6 0.12 4.1E-06 34.4 4.9 39 8-48 9-47 (47)
80 1exr_A Calmodulin; high resolu 93.6 0.27 9.1E-06 38.4 7.8 66 61-127 9-74 (148)
81 1alv_A Calpain, S-camld; calci 93.5 1.2 4.2E-05 35.5 12.0 66 61-128 3-76 (173)
82 3h4s_E KCBP interacting Ca2+-b 93.5 0.23 8E-06 39.0 7.4 68 61-129 39-107 (135)
83 2aao_A CDPK, calcium-dependent 93.5 0.29 9.8E-06 38.6 8.0 66 61-127 26-91 (166)
84 1pva_A Parvalbumin; calcium bi 93.5 0.22 7.7E-06 36.9 6.9 67 60-127 40-109 (110)
85 2ovk_C Myosin catalytic light 93.4 0.35 1.2E-05 38.0 8.3 68 60-128 83-152 (159)
86 2obh_A Centrin-2; DNA repair c 93.3 0.21 7.1E-06 39.0 6.8 66 61-127 5-70 (143)
87 3k21_A PFCDPK3, calcium-depend 93.3 0.27 9.1E-06 40.7 7.8 67 60-128 50-116 (191)
88 1wgn_A UBAP1, ubiquitin associ 93.2 0.062 2.1E-06 38.4 3.0 46 3-49 14-59 (63)
89 2bl0_B Myosin regulatory light 93.2 0.24 8.1E-06 38.0 6.8 64 61-128 4-67 (145)
90 1k2h_A S100A1, S-100 protein, 93.0 0.33 1.1E-05 35.0 7.1 68 61-128 8-81 (93)
91 2jnf_A Troponin C; stretch act 93.0 0.74 2.5E-05 35.8 9.7 64 62-126 91-154 (158)
92 1q80_A SCP, sarcoplasmic calci 93.0 2.6 9E-05 33.0 13.3 66 61-129 5-83 (174)
93 2bl0_B Myosin regulatory light 92.9 0.29 9.9E-06 37.5 7.0 67 60-127 74-140 (145)
94 1bu3_A Calcium-binding protein 92.9 0.22 7.4E-06 37.0 6.0 66 60-126 40-108 (109)
95 2obh_A Centrin-2; DNA repair c 92.9 0.5 1.7E-05 36.8 8.4 65 61-126 78-142 (143)
96 1k8u_A S100A6, calcyclin, CACY 92.8 0.25 8.4E-06 35.3 6.1 68 62-129 10-81 (90)
97 3ll8_B Calcineurin subunit B t 92.8 2.1 7.2E-05 32.8 12.0 64 61-129 5-68 (155)
98 1wdc_C Scallop myosin; calcium 92.8 0.33 1.1E-05 37.9 7.2 68 59-127 81-150 (156)
99 2znd_A Programmed cell death p 92.7 0.44 1.5E-05 38.1 8.0 66 62-128 74-139 (172)
100 3j04_B Myosin regulatory light 92.5 0.18 6.2E-06 38.7 5.3 105 22-127 25-140 (143)
101 1wr1_B Ubiquitin-like protein 92.5 0.16 5.4E-06 35.8 4.4 39 9-48 18-57 (58)
102 3fs7_A Parvalbumin, thymic; ca 92.5 0.3 1E-05 36.2 6.3 66 60-126 40-108 (109)
103 1ggw_A Protein (CDC4P); light 92.4 1.1 3.9E-05 34.0 9.9 63 62-129 5-67 (140)
104 1uhk_A Aequorin 2, aequorin; E 92.4 0.23 7.9E-06 40.0 6.0 68 60-128 14-91 (191)
105 1rro_A RAT oncomodulin; calciu 92.4 0.26 9E-06 36.5 5.9 66 60-126 39-107 (108)
106 1qls_A S100C protein, calgizza 92.3 0.4 1.4E-05 35.0 6.8 68 61-128 12-85 (99)
107 1qv0_A Obelin, OBL; photoprote 92.3 0.33 1.1E-05 39.3 6.9 68 60-128 18-95 (195)
108 2bwb_A Ubiquitin-like protein 92.3 0.22 7.6E-06 33.2 4.7 37 9-46 8-45 (46)
109 2cpw_A CBL-interacting protein 92.3 0.18 6.3E-06 35.9 4.6 38 10-48 21-59 (64)
110 1fi6_A EH domain protein REPS1 92.3 0.23 7.7E-06 36.7 5.3 66 61-129 8-73 (92)
111 2jjz_A Ionized calcium-binding 92.2 0.45 1.5E-05 38.1 7.5 67 61-128 49-115 (150)
112 2mys_C Myosin; muscle protein, 92.2 0.5 1.7E-05 36.1 7.5 66 60-127 83-148 (149)
113 2f2o_A Calmodulin fused with c 92.2 0.27 9.4E-06 39.3 6.2 128 3-131 4-152 (179)
114 2mys_B Myosin; muscle protein, 92.2 0.55 1.9E-05 37.1 7.9 68 60-128 93-160 (166)
115 2ovk_B RLC, myosin regulatory 92.1 0.37 1.3E-05 37.5 6.7 66 60-127 83-148 (153)
116 1m45_A MLC1P, myosin light cha 92.0 0.24 8.2E-06 38.3 5.5 66 60-126 81-146 (148)
117 2cp9_A EF-TS, EF-TSMT, elongat 92.0 0.16 5.6E-06 36.5 4.0 36 9-44 10-45 (64)
118 1qjt_A EH1, epidermal growth f 92.0 0.26 8.7E-06 37.3 5.5 66 61-129 10-75 (99)
119 1c07_A Protein (epidermal grow 92.0 0.25 8.7E-06 36.7 5.3 67 60-129 8-74 (95)
120 1exr_A Calmodulin; high resolu 91.7 0.9 3.1E-05 35.2 8.6 65 61-126 82-146 (148)
121 2kgr_A Intersectin-1; structur 91.7 0.52 1.8E-05 36.3 7.1 67 60-129 12-78 (111)
122 1wy9_A Allograft inflammatory 91.7 0.37 1.3E-05 38.5 6.4 67 61-128 47-113 (147)
123 2bec_A Calcineurin B homologou 91.6 0.35 1.2E-05 39.8 6.3 70 60-130 112-186 (202)
124 1cb1_A Calbindin D9K; calcium- 91.6 0.51 1.7E-05 32.5 6.3 67 60-128 5-76 (78)
125 2y5i_A S100Z, S100 calcium bin 91.5 0.82 2.8E-05 34.4 7.9 68 61-128 9-82 (99)
126 1uhk_A Aequorin 2, aequorin; E 91.5 0.55 1.9E-05 37.7 7.4 62 66-128 113-174 (191)
127 1w7j_B Myosin light chain 1; m 91.5 0.13 4.3E-06 40.0 3.3 68 61-129 9-78 (151)
128 1s6j_A CDPK, calcium-dependent 91.5 0.12 4.1E-06 36.9 3.0 62 62-124 23-84 (87)
129 1jfj_A Ehcabp, calcium-binding 91.5 0.31 1.1E-05 36.4 5.5 63 64-127 2-64 (134)
130 2dai_A Ubadc1, ubiquitin assoc 91.5 0.21 7.2E-06 37.6 4.3 40 8-48 29-68 (83)
131 1gjy_A Sorcin, CP-22, V19; cal 91.5 3.1 0.00011 32.8 11.8 60 68-128 7-71 (167)
132 1qv0_A Obelin, OBL; photoprote 91.4 0.54 1.9E-05 38.0 7.2 63 66-129 117-179 (195)
133 1dtl_A Cardiac troponin C; hel 91.4 0.23 7.7E-06 38.9 4.8 68 60-128 93-160 (161)
134 2lnk_A Protein S100-A4; EF-han 91.3 1.2 4.1E-05 34.8 8.8 69 60-128 20-94 (113)
135 3akb_A Putative calcium bindin 91.2 0.87 3E-05 35.4 8.1 63 63-128 99-161 (166)
136 1ggw_A Protein (CDC4P); light 91.1 0.38 1.3E-05 36.8 5.7 64 61-126 75-138 (140)
137 3sjs_A URE3-BP sequence specif 91.1 0.63 2.2E-05 39.6 7.6 64 63-128 118-181 (220)
138 1m45_A MLC1P, myosin light cha 91.1 0.17 5.7E-06 39.2 3.6 65 63-128 5-70 (148)
139 1vej_A Riken cDNA 4931431F19; 91.1 0.44 1.5E-05 35.1 5.6 39 9-48 30-69 (74)
140 1y1x_A Leishmania major homolo 91.0 0.9 3.1E-05 37.3 8.3 66 62-128 93-158 (191)
141 1fpw_A Yeast frequenin, calciu 91.0 1.6 5.4E-05 35.0 9.7 110 8-128 9-128 (190)
142 3j04_B Myosin regulatory light 91.0 0.34 1.2E-05 37.1 5.4 63 61-128 6-68 (143)
143 1xk4_A Calgranulin A; S100 fam 90.9 0.4 1.4E-05 35.1 5.4 65 62-128 10-78 (93)
144 2mys_B Myosin; muscle protein, 90.9 1.3 4.6E-05 34.7 9.0 63 61-128 24-87 (166)
145 1wdc_C Scallop myosin; calcium 90.8 0.49 1.7E-05 36.9 6.2 68 61-129 8-76 (156)
146 1wdc_B Scallop myosin; calcium 90.8 0.72 2.5E-05 36.0 7.2 104 22-127 36-150 (156)
147 2bl0_C Myosin regulatory light 90.8 0.45 1.5E-05 36.4 5.8 64 60-125 77-140 (142)
148 3e3r_A Calcyphosin, calcyphosi 90.6 0.54 1.8E-05 38.4 6.5 67 61-128 36-102 (204)
149 2l2e_A Calcium-binding protein 90.4 1.9 6.6E-05 34.6 9.7 109 8-127 9-127 (190)
150 1iq3_A Ralbp1-interacting prot 90.4 0.43 1.5E-05 36.9 5.3 67 60-129 20-86 (110)
151 3dtp_E RLC, myosin regulatory 90.3 0.76 2.6E-05 37.9 7.3 64 60-128 55-118 (196)
152 1k94_A Grancalcin; penta-EF-ha 90.3 1.4 4.7E-05 34.8 8.5 64 62-128 70-133 (165)
153 2ovk_C Myosin catalytic light 90.3 0.27 9.3E-06 38.6 4.2 67 61-128 8-75 (159)
154 2d8n_A Recoverin; structural g 90.2 1.5 5.1E-05 36.0 9.0 70 60-129 31-101 (207)
155 2lmt_A Calmodulin-related prot 90.2 0.54 1.9E-05 37.0 6.0 66 62-128 10-75 (148)
156 1s6c_A KV4 potassium channel-i 90.2 1.1 3.9E-05 35.8 8.0 69 59-128 53-121 (183)
157 2cwb_A Chimera of immunoglobul 90.1 0.33 1.1E-05 38.4 4.5 41 9-49 67-107 (108)
158 3dd4_A KV channel-interacting 90.0 6.7 0.00023 33.1 13.3 71 59-129 61-132 (229)
159 1juo_A Sorcin; calcium-binding 90.0 2.5 8.5E-05 34.6 10.2 65 62-128 33-102 (198)
160 2d8n_A Recoverin; structural g 90.0 2.5 8.6E-05 34.6 10.2 110 8-128 17-136 (207)
161 1j55_A S-100P protein; metal b 90.0 1.2 4E-05 33.1 7.4 68 61-128 8-81 (95)
162 1s6i_A CDPK, calcium-dependent 89.9 0.48 1.7E-05 39.1 5.6 66 62-128 10-75 (188)
163 2l2e_A Calcium-binding protein 89.8 1.7 5.7E-05 35.0 8.8 71 60-130 23-94 (190)
164 3n22_A Protein S100-A2; EF-han 89.8 1.6 5.6E-05 32.8 8.2 69 61-129 10-84 (98)
165 2ct9_A Calcium-binding protein 89.8 0.73 2.5E-05 38.2 6.7 70 60-130 111-185 (208)
166 1alv_A Calpain, S-camld; calci 89.7 1 3.6E-05 35.9 7.4 65 62-128 77-141 (173)
167 1whc_A RSGI RUH-027, UBA/UBX 3 89.7 0.2 6.8E-06 35.8 2.6 39 9-48 10-49 (64)
168 1bjf_A Neurocalcin delta; calc 89.6 2 7E-05 34.5 9.2 114 7-128 8-128 (193)
169 1k94_A Grancalcin; penta-EF-ha 89.6 3.9 0.00013 32.0 10.7 60 68-128 5-69 (165)
170 2jul_A Calsenilin; EF-hand, ca 89.4 1.2 4.2E-05 38.4 8.2 68 60-128 127-194 (256)
171 2qac_A Myosin A tail domain in 89.4 0.82 2.8E-05 35.2 6.4 64 60-126 82-145 (146)
172 1nya_A Calerythrin; EF-hand, m 89.4 2.3 7.9E-05 33.3 9.2 73 65-139 61-141 (176)
173 2kax_A Protein S100-A5; EF-han 89.3 1.2 4E-05 32.7 6.9 66 62-129 10-80 (92)
174 3khe_A Calmodulin-like domain 89.3 1.1 3.9E-05 35.9 7.4 66 60-128 121-186 (191)
175 2r2i_A Guanylyl cyclase-activa 89.2 0.56 1.9E-05 38.5 5.5 71 61-131 13-84 (198)
176 1s6c_A KV4 potassium channel-i 89.2 1 3.5E-05 36.0 7.1 70 60-129 16-86 (183)
177 1gjy_A Sorcin, CP-22, V19; cal 89.2 1.4 4.8E-05 34.9 7.8 64 62-128 72-135 (167)
178 1wdc_B Scallop myosin; calcium 89.2 1.5 5.2E-05 34.0 7.9 63 61-128 17-79 (156)
179 2ovk_B RLC, myosin regulatory 89.1 0.65 2.2E-05 36.1 5.6 62 61-127 15-76 (153)
180 3khe_A Calmodulin-like domain 89.1 0.73 2.5E-05 37.1 6.1 67 60-127 38-115 (191)
181 1q80_A SCP, sarcoplasmic calci 89.0 1.5 5.1E-05 34.5 7.8 65 61-128 93-157 (174)
182 3a8r_A Putative uncharacterize 88.7 0.56 1.9E-05 38.7 5.2 67 61-128 97-171 (179)
183 2ccm_A Calexcitin; EF hand, ca 88.7 1.8 6E-05 34.9 8.2 65 61-128 108-172 (191)
184 2ooa_A E3 ubiquitin-protein li 88.6 0.81 2.8E-05 31.5 4.9 34 9-43 12-45 (52)
185 3pm8_A PFCDPK2, calcium-depend 88.5 0.73 2.5E-05 38.2 5.8 66 61-127 56-121 (197)
186 2dag_A Ubiquitin carboxyl-term 88.5 0.4 1.4E-05 35.2 3.6 40 8-48 9-49 (74)
187 2ggz_A Guanylyl cyclase-activa 88.5 1.1 3.8E-05 37.3 7.0 72 59-130 16-88 (211)
188 1s1e_A KV channel interacting 88.3 1.5 5.1E-05 37.2 7.8 67 61-128 88-154 (224)
189 2hpk_A Photoprotein berovin; s 88.2 2.2 7.4E-05 35.1 8.6 62 64-128 130-191 (208)
190 3nso_A Protein S100-A3; EF-han 88.1 1.9 6.4E-05 32.9 7.5 67 62-128 10-82 (101)
191 1w7j_B Myosin light chain 1; m 88.0 0.32 1.1E-05 37.6 3.1 64 61-126 86-149 (151)
192 1a4p_A S100A10; S100 family, E 87.9 0.95 3.2E-05 33.7 5.6 67 61-129 8-79 (96)
193 1g8i_A Frequenin, neuronal cal 87.7 2.2 7.5E-05 34.2 8.1 110 8-128 9-128 (190)
194 3dtp_E RLC, myosin regulatory 87.6 1.1 3.9E-05 36.9 6.4 122 4-127 51-189 (196)
195 2d9s_A CBL E3 ubiquitin protei 87.5 1 3.5E-05 31.1 4.9 36 9-45 10-45 (53)
196 1vek_A UBP14, ubiquitin-specif 87.4 0.66 2.3E-05 34.8 4.3 40 8-48 29-69 (84)
197 3fia_A Intersectin-1; EH 1 dom 87.1 0.85 2.9E-05 36.5 5.1 67 59-130 30-97 (121)
198 3pm8_A PFCDPK2, calcium-depend 87.0 0.73 2.5E-05 38.2 4.9 67 60-127 127-195 (197)
199 1snl_A Nucleobindin 1, calnuc; 86.9 1.8 6.3E-05 32.1 6.7 64 63-127 21-100 (103)
200 3sg6_A Gcamp2, myosin light ch 86.8 6 0.00021 38.2 11.9 66 62-128 312-377 (450)
201 1s1e_A KV channel interacting 86.8 2 6.7E-05 36.5 7.7 71 59-129 48-119 (224)
202 2lvv_A Flagellar calcium-bindi 86.8 1.7 5.9E-05 36.8 7.3 66 61-129 132-200 (226)
203 1juo_A Sorcin; calcium-binding 86.7 2.2 7.4E-05 34.9 7.7 64 62-128 103-166 (198)
204 2wcb_A Protein S100-A12; calci 86.7 0.93 3.2E-05 33.7 4.9 68 61-128 11-84 (95)
205 3u0k_A Rcamp; fluorescent prot 86.5 1.7 5.8E-05 42.1 7.7 64 63-127 303-366 (440)
206 2sas_A Sarcoplasmic calcium-bi 86.4 1.7 5.9E-05 34.3 6.7 66 60-128 103-168 (185)
207 4eto_A Protein S100-A4; calciu 86.1 3.8 0.00013 30.4 8.1 67 62-128 10-82 (93)
208 2lhi_A Calmodulin, serine/thre 86.1 1.2 4E-05 36.6 5.7 65 62-127 11-75 (176)
209 2i7a_A Calpain 13; calcium-dep 85.9 1.7 5.7E-05 35.8 6.6 64 62-128 76-143 (174)
210 1bjf_A Neurocalcin delta; calc 85.8 2 6.8E-05 34.5 6.9 73 59-131 22-95 (193)
211 2lbc_A Ubiquitin carboxyl-term 85.2 1 3.5E-05 35.8 4.7 40 8-48 78-117 (126)
212 2l4h_A Calcium and integrin-bi 85.1 2.6 8.8E-05 35.5 7.5 66 61-127 128-202 (214)
213 1otr_A Protein CUE2; protein-p 85.0 1.7 5.9E-05 29.4 5.0 41 7-47 3-44 (49)
214 1tr8_A Conserved protein (MTH1 84.8 1.2 4.1E-05 34.7 4.8 34 9-42 66-99 (102)
215 1xk4_C Calgranulin B; S100 fam 84.8 4.3 0.00015 30.9 8.1 67 62-128 12-85 (113)
216 2r2i_A Guanylyl cyclase-activa 84.8 7.5 0.00026 31.4 10.1 67 62-129 52-118 (198)
217 2aao_A CDPK, calcium-dependent 84.2 0.96 3.3E-05 35.4 4.1 63 62-127 99-161 (166)
218 1jba_A GCAP-2, protein (guanyl 84.1 4.8 0.00017 32.8 8.6 69 59-128 56-124 (204)
219 2lvv_A Flagellar calcium-bindi 84.0 5.1 0.00018 33.8 8.9 64 61-125 50-123 (226)
220 3dd4_A KV channel-interacting 83.8 3.2 0.00011 35.2 7.5 67 60-127 136-214 (229)
221 3zwh_A Protein S100-A4; Ca-bin 83.8 6 0.00021 30.1 8.4 68 62-129 13-86 (104)
222 2bec_A Calcineurin B homologou 83.7 1.3 4.5E-05 36.3 4.9 64 61-129 28-91 (202)
223 2hps_A Coelenterazine-binding 83.6 2.4 8.3E-05 33.8 6.4 57 73-129 112-168 (186)
224 3bow_A Calpain-2 catalytic sub 83.6 4.8 0.00016 40.8 10.0 66 61-128 531-604 (714)
225 1wgl_A TOLL-interacting protei 83.5 1.4 4.9E-05 30.9 4.3 41 8-48 9-50 (59)
226 3e3r_A Calcyphosin, calcyphosi 83.2 2.2 7.7E-05 34.5 6.1 69 60-129 107-183 (204)
227 3i5g_B Myosin regulatory light 83.1 2.4 8.4E-05 33.8 6.2 123 3-127 9-148 (153)
228 2jul_A Calsenilin; EF-hand, ca 82.7 2.3 7.7E-05 36.7 6.2 72 59-130 88-160 (256)
229 2kyc_A Parvalbumin-3, parvalbu 82.7 0.31 1E-05 36.1 0.5 64 62-126 41-107 (108)
230 2dna_A Unnamed protein product 82.0 2.6 8.9E-05 30.4 5.2 41 9-49 20-60 (67)
231 3i5g_C Myosin catalytic light 82.0 6.4 0.00022 31.5 8.4 125 2-127 1-151 (159)
232 3mse_B Calcium-dependent prote 81.9 18 0.00061 28.8 11.3 66 61-127 107-178 (180)
233 1eh2_A EPS15; calcium binding, 81.8 3 0.0001 32.0 5.9 66 60-129 13-78 (106)
234 2lhi_A Calmodulin, serine/thre 81.7 2.8 9.4E-05 34.3 6.1 123 3-127 4-147 (176)
235 1g8i_A Frequenin, neuronal cal 81.7 3.3 0.00011 33.1 6.5 71 59-129 22-93 (190)
236 2cp8_A NEXT to BRCA1 gene 1 pr 81.6 2.4 8.2E-05 29.4 4.7 38 11-48 12-49 (54)
237 1ij5_A Plasmodial specific LAV 81.3 4.1 0.00014 37.0 7.7 63 62-125 122-184 (323)
238 2be4_A Hypothetical protein LO 81.3 4.2 0.00014 34.3 7.4 67 58-125 7-83 (272)
239 1jfj_A Ehcabp, calcium-binding 81.2 2 6.8E-05 31.8 4.7 59 61-124 74-132 (134)
240 3cs1_A Flagellar calcium-bindi 81.2 1.9 6.4E-05 36.2 5.0 65 61-128 129-196 (219)
241 2qac_A Myosin A tail domain in 81.0 3.1 0.00011 31.8 5.9 62 62-128 14-76 (146)
242 1fpw_A Yeast frequenin, calciu 80.8 4.3 0.00015 32.4 7.0 72 59-130 22-94 (190)
243 1ij5_A Plasmodial specific LAV 80.6 2.6 9E-05 38.3 6.1 19 111-129 265-284 (323)
244 2f33_A Calbindin; EF-hand, Ca2 80.6 4.3 0.00015 34.1 7.1 67 60-127 101-175 (263)
245 2jq6_A EH domain-containing pr 80.1 3.6 0.00012 33.4 6.2 66 60-129 49-114 (139)
246 3a4u_B Multiple coagulation fa 80.0 1.7 5.9E-05 34.4 4.2 65 60-125 66-142 (143)
247 2ehb_A Calcineurin B-like prot 80.0 5.9 0.0002 32.3 7.6 68 60-128 109-184 (207)
248 1vdl_A Ubiquitin carboxyl-term 79.4 1.8 6.1E-05 32.0 3.6 40 9-48 25-65 (80)
249 2zfd_A Calcineurin B-like prot 79.1 6.4 0.00022 33.0 7.7 68 60-128 120-195 (226)
250 3k21_A PFCDPK3, calcium-depend 78.9 7.5 0.00026 31.7 7.9 66 59-125 119-189 (191)
251 3nyv_A Calmodulin-domain prote 78.7 10 0.00034 35.5 9.7 67 61-128 334-411 (484)
252 3nxa_A Protein S100-A16; S100 78.3 7.2 0.00025 29.3 7.0 70 61-130 10-86 (100)
253 3sg6_A Gcamp2, myosin light ch 78.1 4.4 0.00015 39.2 7.1 66 60-126 383-448 (450)
254 1dgu_A Calcium-saturated CIB; 78.0 4.9 0.00017 32.1 6.4 64 62-129 20-91 (183)
255 2ggz_A Guanylyl cyclase-activa 77.6 6.4 0.00022 32.5 7.2 68 61-129 56-123 (211)
256 2h2k_A Protein S100-A13; calci 77.6 8.8 0.0003 29.2 7.4 65 62-128 22-91 (106)
257 3u0k_A Rcamp; fluorescent prot 77.2 4.7 0.00016 39.0 6.9 65 61-126 374-438 (440)
258 1psr_A Psoriasin, S100A7; EF-h 76.9 3.1 0.0001 31.1 4.5 66 61-128 9-81 (100)
259 1qxp_A MU-like calpain; M-calp 76.2 5.8 0.0002 41.0 7.9 65 62-128 607-671 (900)
260 2l4h_A Calcium and integrin-bi 74.5 16 0.00055 30.4 9.0 66 60-129 46-122 (214)
261 1dgu_A Calcium-saturated CIB; 74.4 3 0.0001 33.4 4.2 66 61-127 97-171 (183)
262 1djx_A PLC-D1, phosphoinositid 73.6 4.3 0.00015 40.7 5.8 67 62-129 11-77 (624)
263 3mwu_A Calmodulin-domain prote 72.9 1.8 6.3E-05 40.9 2.8 68 60-128 415-482 (486)
264 3mwu_A Calmodulin-domain prote 72.0 9.3 0.00032 35.9 7.5 67 60-127 329-409 (486)
265 2zfd_A Calcineurin B-like prot 71.8 42 0.0014 27.8 11.4 67 62-129 48-115 (226)
266 3i5g_C Myosin catalytic light 71.6 3.4 0.00012 33.2 3.8 66 62-128 9-75 (159)
267 3q5i_A Protein kinase; CDPK, m 71.6 8.1 0.00028 36.6 7.1 67 60-127 353-427 (504)
268 3i5g_B Myosin regulatory light 70.8 12 0.00042 29.6 7.1 62 62-128 16-77 (153)
269 2be4_A Hypothetical protein LO 70.4 6.6 0.00023 33.0 5.6 68 59-127 101-176 (272)
270 2ehb_A Calcineurin B-like prot 70.0 41 0.0014 27.0 10.6 67 62-130 37-105 (207)
271 2crn_A Ubash3A protein; compac 69.4 4.5 0.00015 28.6 3.5 39 9-48 10-49 (64)
272 3cs1_A Flagellar calcium-bindi 68.9 4.9 0.00017 33.6 4.4 66 61-127 47-122 (219)
273 1pva_A Parvalbumin; calcium bi 68.2 30 0.001 24.8 8.3 64 59-128 7-71 (110)
274 4drw_A Protein S100-A10/annexi 67.8 10 0.00035 29.8 5.8 67 62-130 15-86 (121)
275 1s6i_A CDPK, calcium-dependent 67.2 8.8 0.0003 31.2 5.5 69 60-129 44-112 (188)
276 1sjj_A Actinin; 3-helix bundle 67.0 5.3 0.00018 40.8 5.0 66 62-128 725-790 (863)
277 3bow_A Calpain-2 catalytic sub 66.9 8.9 0.00031 38.8 6.6 65 62-128 605-669 (714)
278 2i7a_A Calpain 13; calcium-dep 66.9 19 0.00064 29.3 7.5 60 77-141 18-83 (174)
279 1aip_C EF-TS, elongation facto 66.8 7.5 0.00026 33.6 5.1 38 8-45 3-40 (196)
280 1aua_A Phosphatidylinositol tr 66.7 7.8 0.00027 34.3 5.5 42 3-44 25-73 (296)
281 3lij_A Calcium/calmodulin depe 66.2 13 0.00046 34.9 7.3 66 61-129 425-490 (494)
282 3q8g_A CRAL-TRIO domain-contai 63.3 8.5 0.00029 35.0 5.1 42 3-44 34-82 (320)
283 3nyv_A Calmodulin-domain prote 63.3 18 0.0006 33.8 7.5 31 61-92 381-411 (484)
284 3q5i_A Protein kinase; CDPK, m 63.2 15 0.00052 34.6 7.1 66 61-129 434-499 (504)
285 2dhy_A CUE domain-containing p 63.0 9.9 0.00034 27.2 4.3 40 7-46 17-57 (67)
286 2jrf_A Tubulin polymerization- 62.8 16 0.00056 31.2 6.4 70 59-128 5-82 (184)
287 2ct9_A Calcium-binding protein 61.1 5.9 0.0002 32.5 3.3 64 61-129 28-91 (208)
288 3a8r_A Putative uncharacterize 61.1 21 0.00073 28.9 6.8 69 61-130 58-130 (179)
289 4ae4_A Ubiquitin-associated pr 61.0 9.8 0.00033 30.1 4.4 45 2-47 2-46 (118)
290 1xb2_B EF-TS, elongation facto 60.9 9.6 0.00033 34.8 5.0 39 8-46 4-42 (291)
291 1r5l_A Alpha-TTP, protein (alp 60.9 4.9 0.00017 34.7 2.9 42 3-44 3-54 (262)
292 1wlm_A Protein CGI-38; structu 60.2 16 0.00054 30.3 5.7 70 59-128 12-89 (151)
293 1bu3_A Calcium-binding protein 59.2 46 0.0016 23.8 8.0 65 58-128 6-71 (109)
294 1eg3_A Dystrophin; EF-hand lik 58.0 22 0.00077 31.8 6.8 65 59-127 165-242 (261)
295 1pul_A Hypothetical protein C3 57.8 54 0.0019 26.2 8.3 68 60-128 20-93 (125)
296 4ae4_A Ubiquitin-associated pr 56.1 16 0.00055 28.8 4.9 36 11-47 79-114 (118)
297 2juj_A E3 ubiquitin-protein li 55.6 21 0.00071 24.7 4.7 36 9-45 8-43 (56)
298 2lva_A Ubiquitin carboxyl-term 59.5 2.6 9E-05 34.0 0.0 41 8-48 18-59 (129)
299 1rwy_A Parvalbumin alpha; EF-h 53.8 41 0.0014 24.0 6.7 64 59-128 6-70 (109)
300 5pal_A Parvalbumin; calcium-bi 53.6 58 0.002 23.2 8.5 64 59-128 6-70 (109)
301 2pvb_A Protein (parvalbumin); 52.4 58 0.002 23.2 7.3 64 59-128 6-70 (108)
302 3lij_A Calcium/calmodulin depe 50.6 15 0.0005 34.7 4.6 67 60-127 344-418 (494)
303 1rro_A RAT oncomodulin; calciu 50.2 30 0.001 24.8 5.4 65 59-129 6-71 (108)
304 2di0_A Activating signal coint 50.1 35 0.0012 24.7 5.4 41 8-48 13-54 (71)
305 1oqy_A HHR23A, UV excision rep 49.8 15 0.00051 34.6 4.4 39 8-47 168-206 (368)
306 2oo9_A E3 ubiquitin-protein li 49.7 31 0.0011 22.9 4.7 35 9-44 5-39 (46)
307 3fs7_A Parvalbumin, thymic; ca 47.3 59 0.002 23.2 6.7 64 59-128 7-71 (109)
308 3h4s_E KCBP interacting Ca2+-b 47.0 10 0.00034 29.3 2.4 66 64-130 5-71 (135)
309 2boy_A 3-chlorocatechol 1,2-di 45.6 34 0.0012 30.6 5.8 51 214-274 13-63 (254)
310 1olm_A SEC14-like protein 2; l 43.8 29 0.00097 32.2 5.3 42 3-44 7-56 (403)
311 2zc2_A DNAD-like replication p 43.3 21 0.00072 25.4 3.5 71 63-137 5-77 (78)
312 2hps_A Coelenterazine-binding 40.1 11 0.00039 29.7 1.7 65 60-127 12-91 (186)
313 2ld7_B Paired amphipathic heli 37.3 65 0.0022 23.2 5.3 55 165-223 17-71 (75)
314 1ufz_A Hypothetical protein BA 35.8 29 0.001 25.9 3.2 45 4-48 26-76 (83)
315 2keb_A DNA polymerase subunit 34.5 56 0.0019 25.2 4.7 48 78-128 24-71 (101)
316 3ohm_B 1-phosphatidylinositol- 33.4 55 0.0019 34.3 6.0 71 60-131 221-305 (885)
317 2kld_A Polycystin-2; PC2, PKD2 32.7 9.9 0.00034 29.3 0.2 59 64-129 52-110 (123)
318 3c5t_B Exendin-4, exenatide; l 32.3 18 0.00061 22.2 1.2 10 262-271 11-20 (31)
319 1p3q_Q VPS9P, vacuolar protein 30.1 29 0.001 23.8 2.2 40 7-46 11-51 (54)
320 2kld_A Polycystin-2; PC2, PKD2 29.0 5.1 0.00017 31.0 -2.2 73 60-141 10-87 (123)
321 1djx_A PLC-D1, phosphoinositid 28.2 1.1E+02 0.0036 30.5 6.8 67 61-129 79-151 (624)
322 3q8k_A Flap endonuclease 1; he 25.6 2.3E+02 0.008 25.8 8.3 85 9-99 219-320 (341)
323 1dmh_A 1,2-CTD, catechol 1,2-d 25.3 1.3E+02 0.0043 27.6 6.2 51 213-273 36-91 (311)
324 2pjp_A Selenocysteine-specific 24.2 48 0.0017 25.4 2.8 21 12-32 83-103 (121)
325 1qxp_A MU-like calpain; M-calp 24.1 10 0.00035 39.2 -1.6 59 68-128 810-868 (900)
326 2zkm_X 1-phosphatidylinositol- 24.0 41 0.0014 34.7 3.0 68 61-129 218-299 (799)
327 2ou3_A Tellurite resistance pr 23.1 1.9E+02 0.0064 23.1 6.4 89 3-102 45-136 (161)
328 2cr7_A Paired amphipathic heli 23.0 1.2E+02 0.0042 21.9 4.7 56 165-224 19-75 (80)
329 2qho_B E3 ubiquitin-protein li 23.0 1E+02 0.0035 20.8 3.8 39 9-47 10-49 (53)
330 3h0g_D DNA-directed RNA polyme 21.9 2.1E+02 0.0071 22.8 6.3 32 115-147 84-115 (135)
331 2h5n_A Hypothetical protein PG 21.8 2.8E+02 0.0096 21.4 9.0 91 3-102 34-126 (133)
332 1ku1_A ARF guanine-nucleotide 21.8 1.8E+02 0.0062 25.3 6.4 38 8-45 23-63 (230)
333 1nri_A Hypothetical protein HI 21.5 34 0.0011 30.7 1.6 34 12-45 248-281 (306)
334 1e91_A Paired amphipathic heli 21.3 1.5E+02 0.0053 21.6 5.0 59 165-223 16-81 (85)
335 2lbc_A Ubiquitin carboxyl-term 21.0 78 0.0027 24.6 3.5 37 10-47 5-42 (126)
336 3g2s_A C-terminal fragment of 20.2 2.1E+02 0.0073 23.0 6.1 36 63-99 11-46 (149)
No 1
>3bq3_A Defective in cullin neddylation protein 1; ubiquitin, ubiquitination,SCF,cullin, E3 E2, cell cycle, protein degradation, ligase; 1.90A {Saccharomyces cerevisiae} PDB: 2is9_A* 3o2p_A 3o6b_A 3tdi_B 2l4e_A 2l4f_A
Probab=100.00 E-value=6.3e-83 Score=587.35 Aligned_cols=244 Identities=27% Similarity=0.571 Sum_probs=226.7
Q ss_pred CCCcchHHHHHHHHhhhCCCHHHHHHHHHhCCCChHHHHHhhcCCCcc-chhc----cCCcccHHHHHHHHHHhcCCCCC
Q psy9055 3 KLKSSQKDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQNPSA-YYKE----QKSSVDRKKLESLYSKYKDASEP 77 (284)
Q Consensus 3 ~l~~~~~~~i~qF~~iT~~s~~~A~~~L~~~~w~l~~A~~~fy~~~~~-~~~~----~~~~~~~~~l~~lFd~Y~d~~~~ 77 (284)
++++++++.|+|||++||+++++|++||++|+|||+.|+++||++|.. +.++ .++.++.++|+++|++|+ ++
T Consensus 10 ~l~~~~~~~i~qF~~iTg~~~~~A~~~L~~~~WdLe~Al~~ff~~~~~~~~~~~~~~~~~~~~~~~l~~lF~~Y~---~~ 86 (270)
T 3bq3_A 10 KDASPEQEAIESFTSLTKCDPKVSRKYLQRNHWNINYALNDYYDKEIGTFTDEVSTVAHPPVYPKELTQVFEHYI---NN 86 (270)
T ss_dssp ---CHHHHHHHHHHHHHCCCHHHHHHHHHTTTTCHHHHHHHHHHHHCC--------CCCCCSSCHHHHHHHHHHC---BT
T ss_pred hhccchHHHHHHHHHHcCCCHHHHHHHHHHcCCCHHHHHHHHHhCccccccccccccccccccHHHHHHHHHHhc---CC
Confidence 678889999999999999999999999999999999999999998875 3222 135678899999999999 45
Q ss_pred CccCHHHHHHHHHHcCCCCCchHHHHHHHhhccccc-ccccHHHHHHHHHHhCCCcHHHHHhhccchhHhhhhccccchH
Q psy9055 78 DKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQ-CEFSRDEFMNGMLELGCDSIEKLKMRLPSLEAELKDNLNCDSI 156 (284)
Q Consensus 78 ~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~-g~~tr~eF~~g~~~l~~~si~~lk~~l~~l~~~~~~~~~~~~~ 156 (284)
+.||+||+++||+||||+|||+++|||||+|+|++| |+|||+||++||+++||+||++||++||
T Consensus 87 d~I~~dG~~~~~~DLgv~ped~~~Lvla~~l~a~~~~g~ftr~ef~~G~~~l~~dsi~~lk~~l~--------------- 151 (270)
T 3bq3_A 87 NLFDIDSLVKFIEELGYNLEDLATLCLAHLLGYKKLEEPLKREDFLSTWFMQGCSTISDMQECIK--------------- 151 (270)
T ss_dssp TBCCHHHHHHHHHHHTCCTTCHHHHHHHHHTTCSCTTSCCCHHHHHHHHHHTTCCSHHHHHHHHH---------------
T ss_pred CccCHhhHHHHHHHcCCChhhHHHHHHHHHcCCCccCceeeHHHHHHHHHHhCCCCHHHHHHHHH---------------
Confidence 799999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred HHHhhhhhhHHH-HhhChhhHHHHHhhhhhcccCCCCCCCCHHHHHHHHHHhhcCCc------ccHHHHHHHHHhhccCC
Q psy9055 157 EKLKMRLPSLEA-ELKDNLKFKDFYQFTFNYAKNPGQKGLDLDMAITYWNIVLQGRF------KFLHLWCTFLQEHHKRS 229 (284)
Q Consensus 157 ~~~~~~~~~l~~-~l~d~~~Fk~~Y~f~F~~~k~~~qk~l~~etAi~~W~lll~~~~------~~l~~W~~FL~~~~~k~ 229 (284)
.|++ .+.|+++|++||+|||.|+|++|||+|++|+||+||+|||++++ +++++|++||+++++|+
T Consensus 152 --------~l~~~~~~d~~~Fk~~Y~f~F~~~r~~gqk~l~~d~Ai~~W~lll~~~~p~~~~~~~l~~W~~FL~~~~~k~ 223 (270)
T 3bq3_A 152 --------TLDVKLHEDLQYFTQIYNYAFNLILDPNRKDIDTDEGIQYWKLFFQPEYPVRMEPDLLEAWFRFLRDEGKTT 223 (270)
T ss_dssp --------HHHHHHHHCHHHHHHHHHHHHHHHCCTTCSEEEHHHHHHHHHHHTSTTSSCCCCHHHHHHHHHHHHHHTCCE
T ss_pred --------HHHHHHccCHHHHHHHHHHHHHHhcCcCcCcCcHHHHHHHHHHHcCCcccccccchHHHHHHHHHHhcCCCC
Confidence 7777 55899999999999999999999999999999999999999999 89999999999999999
Q ss_pred CChhhhHHHHHHHhhc---ccCCCCCCcCCCchHhHHHHHHHhhHh
Q psy9055 230 IPKDTWNLLLDFATAT---NEDMSNYDEEGAWPVLIDDFVEWAQPQ 272 (284)
Q Consensus 230 IskD~W~~~l~F~~~~---~~dls~YDe~~AWP~liDeFVe~~r~~ 272 (284)
||||||+|+|+|++++ ++|+++|||+||||+||||||||+|++
T Consensus 224 IskDtW~~~l~F~~~~~~~~~dls~YDe~~AWP~liDeFVe~~~~~ 269 (270)
T 3bq3_A 224 ISKDTWRMLLLFFKRYPTIQKIISDYDETAAWPFIIDEFYECLQDQ 269 (270)
T ss_dssp EEHHHHHHHHHHHHHCCSHHHHHHHCCTTSSCCHHHHHHHHHHHHT
T ss_pred cCHHHHHHHHHHHHHhccCCCccccCCccCccHHHHHHHHHHHhcc
Confidence 9999999999999999 789999999999999999999999985
No 2
>3tdu_A DCN1-like protein 1; E2:E3, ligase-protein binding complex; 1.50A {Homo sapiens} PDB: 3tdz_A 4gao_A*
Probab=100.00 E-value=3.2e-75 Score=515.03 Aligned_cols=196 Identities=70% Similarity=1.230 Sum_probs=188.1
Q ss_pred cHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHhCCCcHHHHHhh
Q psy9055 60 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLELGCDSIEKLKMR 139 (284)
Q Consensus 60 ~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~~si~~lk~~ 139 (284)
++++|+++|++|+||++++.||+||+++||+||||+|||+++|||||+|+|++||+|||+||++||+++||+|+++||++
T Consensus 2 ~~~~l~~lF~~Y~d~~~~d~I~~dG~~~~~~DLgv~ped~~~Lvlaw~l~a~~~g~ftr~ef~~G~~~l~~dsi~~lk~~ 81 (200)
T 3tdu_A 2 SRKKLEQLYNRYKDPQDENKIGIDGIQQFCDDLALDPASISVLIIAWKFRAATQCEFSKQEFMDGMTELGCDSIEKLKAQ 81 (200)
T ss_dssp CHHHHHHHHHHHEETTEEEEECHHHHHHHHHHHTCCTTSHHHHHHHHHTTCSSTTCEEHHHHHHHHHHHTCSSHHHHHHT
T ss_pred CHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCChhhHHHHHHHHHcCCCccCccCHHHHHHHHHHHccccHHHHHHH
Confidence 57899999999999987899999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchhHhhhhccccchHHHHhhhhhhHHHHhhChhhHHHHHhhhhhcccCCCCCCCCHHHHHHHHHHhhcCCcccHHHHH
Q psy9055 140 LPSLEAELKDNLNCDSIEKLKMRLPSLEAELKDNLKFKDFYQFTFNYAKNPGQKGLDLDMAITYWNIVLQGRFKFLHLWC 219 (284)
Q Consensus 140 l~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~d~~~Fk~~Y~f~F~~~k~~~qk~l~~etAi~~W~lll~~~~~~l~~W~ 219 (284)
|| .|+++++||++|++||+|||+|+|++|||+|++||||+||+|||+++++++++|+
T Consensus 82 l~-----------------------~l~~~l~d~~~Fk~~Y~ftF~~~r~~gqk~L~~e~Ai~~W~lll~~~~~~l~~W~ 138 (200)
T 3tdu_A 82 IP-----------------------KMEQELKEPGRFKDFYQFTFNFAKNPGQKGLDLEMAIAYWNLVLNGRFKFLDLWN 138 (200)
T ss_dssp HH-----------------------HHHHHTTSHHHHHHHHHHHHHHHSCTTCSSEEHHHHHHHHHHHSTTSCTTHHHHH
T ss_pred HH-----------------------HHHHHccCHHHHHHHHHHHHHHHcCcCcCcCCHHHHHHHHHHHcCCCchHHHHHH
Confidence 99 8888999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhccCCCChhhhHHHHHHHhhcccCCCCCCcCCCchHhHHHHHHHhhHhhhccCC
Q psy9055 220 TFLQEHHKRSIPKDTWNLLLDFATATNEDMSNYDEEGAWPVLIDDFVEWAQPQVKAANQ 278 (284)
Q Consensus 220 ~FL~~~~~k~IskD~W~~~l~F~~~~~~dls~YDe~~AWP~liDeFVe~~r~~~~~~~~ 278 (284)
+||+++++|+||||||+|+|+|++++++|+++|||+||||+||||||||+|+++.+.+.
T Consensus 139 ~FL~~~~~k~IskD~W~~~l~F~~~i~~dls~YDe~gAWP~liDeFVew~r~~~~~~~~ 197 (200)
T 3tdu_A 139 KFLLEHHKRSIPKDTWNLLLDFSTMIADDMSNYDEEGAWPVLIDDFVEFARPQIAGTKS 197 (200)
T ss_dssp HHHHHTTCCEECHHHHHHHHHHHHHCCTTCTTCCTTSSCCHHHHHHHHHHHHHCC----
T ss_pred HHHHhcCCcCcCHhHHHHHHHHHHHhcccccCCCCCCCchHHHHHHHHHHHHHhccccC
Confidence 99999999999999999999999999999999999999999999999999999887753
No 3
>3kev_A Galieria sulfuraria DCUN1 domain-containing prote; cullin, neddylation, DCN-1, center for eukaryotic structural genomics, PSI; HET: CSO MSE; 1.30A {Galdieria sulphuraria}
Probab=100.00 E-value=9.8e-74 Score=505.22 Aligned_cols=193 Identities=43% Similarity=0.901 Sum_probs=179.9
Q ss_pred cccHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHhCCCcHHHHH
Q psy9055 58 SVDRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLELGCDSIEKLK 137 (284)
Q Consensus 58 ~~~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~~si~~lk 137 (284)
++++++|+++|++|++|+++ .||+||+++||+||||+|||+++|||||+|+|++||+|||+||++||+++||+|+++||
T Consensus 3 ~~~~~~l~~lF~~Y~d~~~~-~I~~dG~~~~~~DLgv~ped~~~LvLaw~l~a~~~g~ftr~ef~~G~~~l~~dsi~~lk 81 (199)
T 3kev_A 3 RADKKAILELFQTYKEPLGN-YIGAEGLQRLFEDIQVDPSDVVTLVLAWKLKASSTCEFSEKEFVEGLANLQVDSLEKLK 81 (199)
T ss_dssp -CCHHHHHHHHHHHCCTTSS-EECHHHHHHHHHHTTCCTTSHHHHHHHHHTTCCSTTCEEHHHHHHHHHHTTCCSHHHHH
T ss_pred ccCHHHHHHHHHHhcCCCcC-ccCHHHHHHHHHHcCCChhhHHHHHHHHHcCCCccCcccHHHHHHHHHHhCCCCHHHHH
Confidence 46889999999999998775 99999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccchhHhhhhccccchHHHHhhhhhhHHHHhhChhhHHHHHhhhhhcccCCCCCCCCHHHHHHHHHHhhcCCcccHHH
Q psy9055 138 MRLPSLEAELKDNLNCDSIEKLKMRLPSLEAELKDNLKFKDFYQFTFNYAKNPGQKGLDLDMAITYWNIVLQGRFKFLHL 217 (284)
Q Consensus 138 ~~l~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~d~~~Fk~~Y~f~F~~~k~~~qk~l~~etAi~~W~lll~~~~~~l~~ 217 (284)
++|| .|+++++||++|++||+|||+|+|++|||+|++||||+||+|||+++++++++
T Consensus 82 ~~l~-----------------------~l~~~l~d~~~Fk~~Y~ftF~~~re~gqk~L~~e~Ai~~W~lll~~~~~~l~~ 138 (199)
T 3kev_A 82 RKLS-----------------------SLRKEIEDPSKFRAFYQFVFQYSKEPSQRSLPAETAMALWDVLLRGRFSLLDS 138 (199)
T ss_dssp HHHH-----------------------HHHHHTTSHHHHHHHHHHHHHHHSCTTCSSBCHHHHHHHHHHHHTTTCTTHHH
T ss_pred HHHH-----------------------HHHHHccCHHHHHHHHHHHHHHHcCcCcCCCCHHHHHHHHHHHhCCccHHHHH
Confidence 9999 88888999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhccCCCChhhhHHHHHHHhhcccCCCCCCcCCCchHhHHHHHHHhhHhhhc
Q psy9055 218 WCTFLQEHHKRSIPKDTWNLLLDFATATNEDMSNYDEEGAWPVLIDDFVEWAQPQVKA 275 (284)
Q Consensus 218 W~~FL~~~~~k~IskD~W~~~l~F~~~~~~dls~YDe~~AWP~liDeFVe~~r~~~~~ 275 (284)
|++||++++ |+||||||+|+|+|++++++++++|||+||||+||||||||+|++...
T Consensus 139 W~~FL~~~~-k~IskD~W~~~l~F~~~i~~dls~YDe~gAWP~liDeFVe~~r~~~~~ 195 (199)
T 3kev_A 139 WLEFLKNNT-HSISRDTWNLLYDFSQLSEKDLSDYDENGAWPVLIDDFVKWLKHEQPN 195 (199)
T ss_dssp HHHHGGGCC-SCBCHHHHHHHHHHHTC--CTTTTCC---CCCHHHHHHHHHHTTC---
T ss_pred HHHHHHhcC-CCcCHHHHHHHHHHHHHhcccccCCCCCCCchHHHHHHHHHHHHcCCC
Confidence 999999888 999999999999999999999999999999999999999999987443
No 4
>4gba_A DCN1-like protein 3; E3 ligase, ligase-peptide complex; HET: AME; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.6e-72 Score=503.80 Aligned_cols=197 Identities=41% Similarity=0.812 Sum_probs=185.0
Q ss_pred cccHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHhCCCcHHHHH
Q psy9055 58 SVDRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLELGCDSIEKLK 137 (284)
Q Consensus 58 ~~~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~~si~~lk 137 (284)
+++.++|+++|++|+|+ +++.||++|+++||+||||+|||+++|||||+|+|++||+|||+||++||+++||+|+++||
T Consensus 2 ~~~~~~l~~lF~~Y~d~-~~d~I~~eGi~~l~~DLgv~ped~~~LvLAw~l~A~~mg~ftr~eF~~G~~~l~~dsi~~lk 80 (221)
T 4gba_A 2 SSSLQRLEELFRRYKDE-REDAILEEGMERFCNDLCVDPTEFRVLLLAWKFQAATMCKFTRKEFFDGCKAISADSIDGIC 80 (221)
T ss_dssp ----CHHHHHHHTTSCS-SSSEECHHHHHHHHHHTTCCTTSHHHHHHHHHTTCCSTTCEEHHHHHHHHHHHTCSSHHHHH
T ss_pred CCCHHHHHHHHHHhcCC-CCCccCHHHHHHHHHHcCCChhhHHHHHHHHHhCCCccCcCcHHHHHHHHHHhCcCCHHHHH
Confidence 35678999999999997 56899999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccchhHhhhhccccchHHHHhhhhhhHHHHhhChhhHHHHHhhhhhcccC--CCCCCCCHHHHHHHHHHhhcC-Cccc
Q psy9055 138 MRLPSLEAELKDNLNCDSIEKLKMRLPSLEAELKDNLKFKDFYQFTFNYAKN--PGQKGLDLDMAITYWNIVLQG-RFKF 214 (284)
Q Consensus 138 ~~l~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~d~~~Fk~~Y~f~F~~~k~--~~qk~l~~etAi~~W~lll~~-~~~~ 214 (284)
++|| .|++++.||++||+||+|||+|+|+ +|||+|++||||+||+|||++ ++++
T Consensus 81 ~~l~-----------------------~L~~~l~d~~~Fk~~Y~ftF~~~~~~e~gqk~L~le~Ai~~W~Lll~~~~~~~ 137 (221)
T 4gba_A 81 ARFP-----------------------SLLTEAKQEDKFKDLYRFTFQFGLDSEEGQRSLHREIAIALWKLVFTQNNPPV 137 (221)
T ss_dssp HHHH-----------------------HHHHHTTSHHHHHHHHHHHHHHHSCTTTTCSSEEHHHHHHHHHHHTTTCCCTT
T ss_pred HHHH-----------------------HHHHHccCHHHHHHHHHHHHHHHhcCCccccCCCHHHHHHHHHHHcCCCCcHH
Confidence 9999 8888999999999999999999999 999999999999999999998 8999
Q ss_pred HHHHHHHHHhh--ccCCCChhhhHHHHHHHhhcccCCCCCCcCCCchHhHHHHHHHhhHhhhccCC
Q psy9055 215 LHLWCTFLQEH--HKRSIPKDTWNLLLDFATATNEDMSNYDEEGAWPVLIDDFVEWAQPQVKAANQ 278 (284)
Q Consensus 215 l~~W~~FL~~~--~~k~IskD~W~~~l~F~~~~~~dls~YDe~~AWP~liDeFVe~~r~~~~~~~~ 278 (284)
+++|++||+++ ++|+||||||+|||+|++++++|+++|||+||||+||||||||+|++.++...
T Consensus 138 l~~W~~FL~~~~~~~k~IskDtW~~~l~F~~~i~~dls~YDe~gAWP~liDeFVEw~ke~~~~~~~ 203 (221)
T 4gba_A 138 LDQWLNFLTENPSGIKGISRDTWNMFLNFTQVIGPDLSNYSEDEAWPSLFDTFVEWEMERRKREGE 203 (221)
T ss_dssp HHHHHHHHHHCTTCCCEECHHHHHHHHHHHHHSCSSCTTCCTTSCCCHHHHHHHHHHHHHHHCC--
T ss_pred HHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHHhcccccCCCCCCCchHHHHHHHHHHHHHhhhhhh
Confidence 99999999987 37999999999999999999999999999999999999999999999887643
No 5
>1v92_A NSFL1 cofactor P47; 3-helix bundle, recombination; NMR {Rattus norvegicus} SCOP: a.5.2.3
Probab=99.32 E-value=1.4e-12 Score=88.49 Aligned_cols=44 Identities=20% Similarity=0.458 Sum_probs=41.5
Q ss_pred CcchHHHHHHHHhhhCCCHHHHHHHHHhCCCChHHHHHhhcCCC
Q psy9055 5 KSSQKDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQNP 48 (284)
Q Consensus 5 ~~~~~~~i~qF~~iT~~s~~~A~~~L~~~~w~l~~A~~~fy~~~ 48 (284)
+++++++|.+|+++||+++.+|++||++++|||+.||+.||++|
T Consensus 2 M~~~~~~i~~F~~iTg~~~~~A~~~L~~~~wdle~Ai~~ff~~~ 45 (46)
T 1v92_A 2 AEERQDALREFVAVTGAEEDRARFFLESAGWDLQIALASFYEDG 45 (46)
T ss_dssp TTHHHHHHHHHHHHTCCCHHHHHHHHHHTTSCSHHHHHHHHHTC
T ss_pred cccHHHHHHHHHHHhCcCHHHHHHHHHHcCCCHHHHHHHHHcCC
Confidence 45788999999999999999999999999999999999999875
No 6
>2dam_A ETEA protein; KIAA0887, UBA-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.28 E-value=2.5e-12 Score=94.67 Aligned_cols=49 Identities=18% Similarity=0.352 Sum_probs=45.9
Q ss_pred CCCCCcchHHHHHHHHhhhC-CCHHHHHHHHHhCCCChHHHHHhhcCCCc
Q psy9055 1 MHKLKSSQKDKVKRFISFTQ-TGELTAINCLSQNDWKLDLASDNYFQNPS 49 (284)
Q Consensus 1 m~~l~~~~~~~i~qF~~iT~-~s~~~A~~~L~~~~w~l~~A~~~fy~~~~ 49 (284)
|++|+.+++++|+||++||| +++.+|++||+.++|||+.||+.||+.+.
T Consensus 11 ~~~Ls~~~~e~i~qF~~ITg~~d~~~A~~~Le~~~WnLe~Av~~ff~~~~ 60 (67)
T 2dam_A 11 ERDLTQEQTEKLLQFQDLTGIESMDQCRHTLEQHNWNIEAAVQDRLNEQE 60 (67)
T ss_dssp CCCCCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHTSCHHHHHHHHHHSSC
T ss_pred hhhcChhHHHHHHHHHHHhCCCCHHHHHHHHHHcCCCHHHHHHHHHhCCC
Confidence 56899999999999999999 89999999999999999999999998754
No 7
>3e21_A HFAF1, FAS-associated factor 1; UBA, alternative splicing, apoptosis, nucleus, phosphoprotein; 1.73A {Homo sapiens}
Probab=99.25 E-value=3.4e-12 Score=86.86 Aligned_cols=42 Identities=24% Similarity=0.287 Sum_probs=37.5
Q ss_pred CcchHHHHHHHHhhhCCCH-HHHHHHHHhCCCChHHHHHhhcC
Q psy9055 5 KSSQKDKVKRFISFTQTGE-LTAINCLSQNDWKLDLASDNYFQ 46 (284)
Q Consensus 5 ~~~~~~~i~qF~~iT~~s~-~~A~~~L~~~~w~l~~A~~~fy~ 46 (284)
+.+++++|.+|++|||+++ .+|++||+++||||+.|++.||.
T Consensus 2 ~~d~de~ia~F~~iTG~~d~~~A~~~Lea~nWDLe~Av~~f~~ 44 (45)
T 3e21_A 2 SMDREMILADFQACTGIENIDEAITLLEQNNWDLVAAINGVIP 44 (45)
T ss_dssp -CCHHHHHHHHHHHHCCCCHHHHHHHHHHTTTCHHHHHTTC--
T ss_pred cccHHHHHHHHHHHHCCCCHHHHHHHHHHcCCcHHHHHHHHcC
Confidence 4578999999999999997 99999999999999999999985
No 8
>2dal_A Protein KIAA0794; FAS associted factor 1, UBA-like domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.24 E-value=5.9e-12 Score=91.24 Aligned_cols=47 Identities=17% Similarity=0.261 Sum_probs=44.2
Q ss_pred CCCcchHHHHHHHHhhhCCCHHHHHHHHHhCCCChHHHHHhhcCCCc
Q psy9055 3 KLKSSQKDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQNPS 49 (284)
Q Consensus 3 ~l~~~~~~~i~qF~~iT~~s~~~A~~~L~~~~w~l~~A~~~fy~~~~ 49 (284)
.|+..++++|+||++|||+++++|++||+.++|||+.||+.||+++.
T Consensus 10 ~~s~~~~e~i~qF~~iTg~~~~~A~~~Le~~~WnLe~Av~~ff~~~~ 56 (62)
T 2dal_A 10 AASSALKGLIQQFTTITGASESVGKHMLEACNNNLEMAVTMFLDGGG 56 (62)
T ss_dssp SSCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTSCHHHHHHHHHHSCC
T ss_pred hcCccHHHHHHHHHHHhCCCHHHHHHHHHHcCCCHHHHHHHHHcCCC
Confidence 46788999999999999999999999999999999999999998875
No 9
>2dzl_A Protein FAM100B; UBA-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.20 E-value=1.8e-11 Score=89.87 Aligned_cols=46 Identities=15% Similarity=0.302 Sum_probs=41.4
Q ss_pred CCcc-hH-HHHHHHHhhhCCCHHHHHHHHHhCCCChHHHHHhhcCCCc
Q psy9055 4 LKSS-QK-DKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQNPS 49 (284)
Q Consensus 4 l~~~-~~-~~i~qF~~iT~~s~~~A~~~L~~~~w~l~~A~~~fy~~~~ 49 (284)
.+++ ++ ++|++|++|||+++.+|++||+.++|||+.||+.||+++.
T Consensus 11 ~m~~~~~q~~i~qF~~iTg~~~~~A~~~Le~~~WdLe~Al~~ff~~~~ 58 (66)
T 2dzl_A 11 NMDELRHQVMINQFVLAAGCAADQAKQLLQAAHWQFETALSTFFQETN 58 (66)
T ss_dssp CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHTTTTCHHHHHHHHHTCSC
T ss_pred HhhcCccHHHHHHHHHHcCCCHHHHHHHHHHcCCCHHHHHHHHHcCCC
Confidence 3444 55 7899999999999999999999999999999999998875
No 10
>2jp7_A MRNA export factor MEX67; solution MEX67, UBA, translation; NMR {Saccharomyces cerevisiae} PDB: 2khh_A
Probab=97.82 E-value=2.4e-05 Score=55.56 Aligned_cols=45 Identities=13% Similarity=0.245 Sum_probs=42.1
Q ss_pred CCCcchHHHHHHHHhhhCCCHHHHHHHHHhCCCChHHHHHhhcCC
Q psy9055 3 KLKSSQKDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQN 47 (284)
Q Consensus 3 ~l~~~~~~~i~qF~~iT~~s~~~A~~~L~~~~w~l~~A~~~fy~~ 47 (284)
+|++.|.++|.+|+..||.+.+-+..||+.++||++.|+..|-..
T Consensus 1 ~l~~~q~~mv~~~s~~T~Mn~e~S~~cL~~n~Wd~~~A~~~F~~~ 45 (57)
T 2jp7_A 1 RLNPVQLELLNKLHLETKLNAEYTFMLAEQSNWNYEVAIKGFQSS 45 (57)
T ss_dssp CCCHHHHHHHHHHHHHHCSCHHHHHHHHHHTTTCSHHHHHHHHHS
T ss_pred CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 478889999999999999999999999999999999999999654
No 11
>1oai_A Nuclear RNA export factor; nuclear transport, nuclear transport factor; 1.0A {Homo sapiens} SCOP: a.5.2.3
Probab=97.78 E-value=3.1e-05 Score=55.26 Aligned_cols=43 Identities=16% Similarity=0.390 Sum_probs=40.7
Q ss_pred CCcchHHHHHHHHhhhCCCHHHHHHHHHhCCCChHHHHHhhcC
Q psy9055 4 LKSSQKDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQ 46 (284)
Q Consensus 4 l~~~~~~~i~qF~~iT~~s~~~A~~~L~~~~w~l~~A~~~fy~ 46 (284)
|+..|.++|.+|+..||.+.+=+..||+.++||++.|+..|-.
T Consensus 3 ls~~q~~mv~~~s~~Tgmn~~~s~~cL~~~~Wd~~~A~~~F~~ 45 (59)
T 1oai_A 3 LSPEQQEMLQAFSTQSGMNLEWSQKCLQDNNWDYTRSAQAFTH 45 (59)
T ss_dssp CCHHHHHHHHHHHHHHCCCHHHHHHHHHHTTTCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 6788999999999999999999999999999999999999964
No 12
>1z96_A DNA-damage, UBA-domain protein MUD1; ubiquitin, three-helix bundle, protein transport; 1.80A {Schizosaccharomyces pombe} SCOP: a.5.2.1
Probab=97.48 E-value=0.00019 Score=46.35 Aligned_cols=39 Identities=21% Similarity=0.309 Sum_probs=34.7
Q ss_pred cchHHHHHHHHhhhCCCHHHHHHHHHhCCCChHHHHHhhc
Q psy9055 6 SSQKDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYF 45 (284)
Q Consensus 6 ~~~~~~i~qF~~iT~~s~~~A~~~L~~~~w~l~~A~~~fy 45 (284)
+...+.|++++++ |.+++.|++.|..++||++.|++..|
T Consensus 2 ~~~~~~i~~L~~m-Gf~~~~a~~AL~~~~~n~e~A~~~L~ 40 (40)
T 1z96_A 2 PGLNSKIAQLVSM-GFDPLEAAQALDAANGDLDVAASFLL 40 (40)
T ss_dssp -CHHHHHHHHHHT-TCCHHHHHHHHHHTTTCHHHHHHHHC
T ss_pred chHHHHHHHHHHc-CCCHHHHHHHHHHcCCCHHHHHHHHC
Confidence 3457789999999 99999999999999999999998754
No 13
>4gew_A 5'-tyrosyl-DNA phosphodiesterase; 5'-phosphotyrosyl-DNA diesterase, hydrolase; 2.35A {Caenorhabditis elegans} PDB: 4f1i_A
Probab=97.35 E-value=0.00012 Score=68.70 Aligned_cols=42 Identities=31% Similarity=0.470 Sum_probs=38.7
Q ss_pred chHHHHHHHHhhhCCCHHHHHHHHHhCCCChHHHHHhhcCCC
Q psy9055 7 SQKDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQNP 48 (284)
Q Consensus 7 ~~~~~i~qF~~iT~~s~~~A~~~L~~~~w~l~~A~~~fy~~~ 48 (284)
...+++++|.+||||++..|..||+.++|+|+.|++.||..+
T Consensus 44 ~~~~~~~~f~~~~~~~~~~~~~~l~~~~w~~~~~~~~~~~~~ 85 (362)
T 4gew_A 44 SDEQKLHEFAIITATDEAFAQSILQDVDWDLKKALDVFYGSE 85 (362)
T ss_dssp CHHHHHHHHHHHHTCCHHHHHHHTTSSSSCHHHHHHHHHHCG
T ss_pred chHHHHHHHHHHhCCcHHHHHHHHhhcCchHHHHHHHHcCCc
Confidence 456789999999999999999999999999999999999654
No 14
>1wj7_A Hypothetical protein (RSGI RUH-015); UBA domain, ubiquitin associated domain, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: a.5.2.1
Probab=97.07 E-value=0.00059 Score=53.88 Aligned_cols=43 Identities=16% Similarity=0.227 Sum_probs=39.4
Q ss_pred chHHHHHHHHhhhCCCHHHHHHHHHhCCCChHHHHHhhcCCCc
Q psy9055 7 SQKDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQNPS 49 (284)
Q Consensus 7 ~~~~~i~qF~~iT~~s~~~A~~~L~~~~w~l~~A~~~fy~~~~ 49 (284)
..++.|+..+++||++++.|+..|..++|||+.||+..++...
T Consensus 38 d~eekVk~L~EmtG~seeeAr~AL~~~ngDl~~AI~~Lleg~~ 80 (104)
T 1wj7_A 38 DFEEKVKQLIDITGKNQDECVIALHDCNGDVNRAINVLLEGNP 80 (104)
T ss_dssp HHHHHHHHHHHHTCCCHHHHHHHHHHHTSCHHHHHHHHHTCSS
T ss_pred cHHHHHHHHHHhhCCCHHHHHHHHHHcCCCHHHHHHHHHhCCC
Confidence 3467899999999999999999999999999999999997763
No 15
>2l2d_A OTU domain-containing protein 7A; UBA fold, structural genomics, PSI-biology, protein structur initiative, northeast structural genomics consortium; NMR {Homo sapiens}
Probab=96.80 E-value=0.0024 Score=46.01 Aligned_cols=42 Identities=19% Similarity=0.271 Sum_probs=38.4
Q ss_pred CCcchHHHHHHHHhhhCCCHHHHHHHHHhCCCChHHHHHhhc
Q psy9055 4 LKSSQKDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYF 45 (284)
Q Consensus 4 l~~~~~~~i~qF~~iT~~s~~~A~~~L~~~~w~l~~A~~~fy 45 (284)
++-+.+..+.+|+.-|||.+-.|+..|+-.||||.+|++.|=
T Consensus 13 mt~dmdavls~fvrstgaepgLaRDlleGKnWDl~AAL~D~e 54 (73)
T 2l2d_A 13 MTLDMDAVLSDFVRSTGAEPGLARDLLEGKNWDLTAALSDYE 54 (73)
T ss_dssp SSCCHHHHHHHHHHHHCCCHHHHHHHHHHTTTCHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHhcCCCcchhHHhhccCCccHhHHhhhHH
Confidence 445678889999999999999999999999999999999984
No 16
>1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand (helix-loop-helix) calcium binding protein, four-HEL domain, protein engineering; HET: FME; 1.44A {Bos taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A 1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A 1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A
Probab=96.43 E-value=0.0072 Score=42.19 Aligned_cols=68 Identities=13% Similarity=0.154 Sum_probs=53.8
Q ss_pred HHHHHHHHHHhcCCCCC-CccCHHHHHHHHHHcCCCC--CchHHHHHHHhhcccccccccHHHHHHHHHHh
Q psy9055 61 RKKLESLYSKYKDASEP-DKILVEGIMKFLDDLSLSP--ESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 61 ~~~l~~lFd~Y~d~~~~-~~I~~dG~~~~~edLgv~p--ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 128 (284)
...+..+|..|.|.+.. +.|+.+-+.+.+..+|..+ ..-.+-.+...+....-|.|+.+||+..+..+
T Consensus 4 ~~~l~~~F~~~~D~d~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~ 74 (76)
T 1qx2_A 4 PEEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFEEFLVMMKKI 74 (76)
T ss_dssp HHHHHHHHHHHHTSSSCTTSEEHHHHHHHHHHHGGGSCTTSCSHHHHHHHHCTTCSSEECHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccCCCcCeECHHHHHHHHHHhCCCcCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHh
Confidence 56899999999655556 7899999999999999776 54444445555666677999999999988775
No 17
>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A
Probab=96.21 E-value=0.097 Score=40.41 Aligned_cols=67 Identities=9% Similarity=0.161 Sum_probs=55.3
Q ss_pred HHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHh
Q psy9055 61 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 61 ~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 128 (284)
.+.+.++|..+-. +..+.|+.+-+.+++..+|+.+....+-.+...+....-|.|+.+||+..+...
T Consensus 10 ~~~l~~~F~~~D~-d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~ 76 (153)
T 3ox6_A 10 IEELREAFREFDK-DKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVELMGPK 76 (153)
T ss_dssp HHHHHHHHHHHHH-HCSSSCCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTTSTTCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCC-CCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCccCcHHHHHHHHHHH
Confidence 4678888888842 344789999999999999999988877777777777778999999999988653
No 18
>1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A
Probab=96.12 E-value=0.026 Score=41.05 Aligned_cols=67 Identities=13% Similarity=0.183 Sum_probs=55.4
Q ss_pred HHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHh
Q psy9055 61 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 61 ~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 128 (284)
...+..+|..| |.+..+.|+.+-+...+..+|+.+....+-.|...+....-|.|+.+||+..+...
T Consensus 19 ~~~l~~~F~~~-D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~D~~~dg~i~~~eF~~~~~~~ 85 (90)
T 1avs_A 19 IAEFKAAFDMF-DADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQ 85 (90)
T ss_dssp HHHHHHHHHHH-CTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCCSSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-CCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHH
Confidence 45788889999 55555899999999999999999887666666667777778999999999988763
No 19
>2ktg_A Calmodulin, putative; ehcam, Ca-binding protein, partially structured protein, CAM-like; NMR {Entamoeba histolytica} PDB: 2lc5_A
Probab=96.01 E-value=0.022 Score=40.66 Aligned_cols=68 Identities=16% Similarity=0.368 Sum_probs=56.5
Q ss_pred cHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHh
Q psy9055 60 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 60 ~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 128 (284)
....+..+|..| |.+..+.|+.+-+.+.+..+|+.+....+-.+...+....-|.|+.+||+..+...
T Consensus 12 ~~~~l~~~F~~~-D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~ 79 (85)
T 2ktg_A 12 EQQEYKEAFQLF-DKDNDNKLTAEELGTVMRALGANPTKQKISEIVKDYDKDNSGKFDQETFLTIMLEY 79 (85)
T ss_dssp HHHHHHHHHHHT-CTTCCSEEEHHHHHHHHHTTSSCCCHHHHHHHHHHHSSSSCSEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-CCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 346788899998 44555799999999999999999887777667777777778999999999998774
No 20
>2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens}
Probab=96.00 E-value=0.0068 Score=41.74 Aligned_cols=67 Identities=10% Similarity=0.174 Sum_probs=54.9
Q ss_pred cHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHH
Q psy9055 60 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE 127 (284)
Q Consensus 60 ~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~ 127 (284)
....+..+|..| |.+..+.|+.+-+.+++..+|..+....+-.+...+....-|.|+.+||+..|..
T Consensus 4 ~~~~l~~~F~~~-D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~ 70 (71)
T 2b1u_A 4 GLEDLQVAFRAF-DQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFARMLAQ 70 (71)
T ss_dssp THHHHHHHHTTS-CCSSSSEEEHHHHHHHGGGTTCSSCHHHHHHHHHHCCSSSSSEEETTHHHHHHTC
T ss_pred cHHHHHHHHHHH-CCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhh
Confidence 457899999888 5455578999999999999999887766666666777777899999999987753
No 21
>1dv0_A DNA repair protein HHR23A; helical bundle, DNA binding protein; HET: DNA; NMR {Homo sapiens} SCOP: a.5.2.1 PDB: 1f4i_A
Probab=95.99 E-value=0.005 Score=41.61 Aligned_cols=42 Identities=17% Similarity=0.204 Sum_probs=37.8
Q ss_pred cchHHHHHHHHhhhCCCHHHHHHHHHhCCCChHHHHHhhcCCC
Q psy9055 6 SSQKDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQNP 48 (284)
Q Consensus 6 ~~~~~~i~qF~~iT~~s~~~A~~~L~~~~w~l~~A~~~fy~~~ 48 (284)
+..+++|++.+++ |-++..|++-|.+++||.+.|++-.|.++
T Consensus 2 ~~e~eaI~rL~~m-GF~~~~a~~Al~a~~~n~e~A~~~Lf~~~ 43 (47)
T 1dv0_A 2 SQEKEAIERLKAL-GFPESLVIQAYFACEKNENLAANFLLSQN 43 (47)
T ss_dssp -CCHHHHTTTTTT-TCCHHHHHHHHTTTTSCHHHHHHHTTSCC
T ss_pred cchHHHHHHHHHc-CCCHHHHHHHHHHcCCCHHHHHHHHHhCc
Confidence 5667889999988 99999999999999999999999999765
No 22
>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max}
Probab=95.97 E-value=0.053 Score=39.29 Aligned_cols=70 Identities=11% Similarity=0.163 Sum_probs=57.2
Q ss_pred cHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHhCC
Q psy9055 60 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLELGC 130 (284)
Q Consensus 60 ~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~ 130 (284)
....+..+|..| |.+..+.|+.+-+.+.+..+|..+....+-.+...+....-|.|+.++|+..+.....
T Consensus 7 ~~~~l~~~F~~~-D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~dg~i~~~eF~~~~~~~~~ 76 (92)
T 2kn2_A 7 AEEELKEAFKVF-DKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKMMMTVRG 76 (92)
T ss_dssp HHHHHHHHHHHH-CTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCCSSEEHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHH-CCCCCCeEcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhccC
Confidence 456789999999 4445578999999999999999887766666666777777899999999999987543
No 23
>1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5
Probab=95.85 E-value=0.024 Score=38.26 Aligned_cols=64 Identities=13% Similarity=0.188 Sum_probs=52.2
Q ss_pred HHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHH
Q psy9055 63 KLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE 127 (284)
Q Consensus 63 ~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~ 127 (284)
.+.++|..| |.+..+.|+.+-+.+.+..+|..+....+-.+...+....-|.|+.+||+..+.+
T Consensus 2 ~l~~~F~~~-D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~ 65 (67)
T 1tiz_A 2 SAKRVFEKF-DKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIEK 65 (67)
T ss_dssp THHHHHHHH-CTTSSSCEEHHHHHHHHHHTCTTSCHHHHHHHHHHHCCSSSSEECHHHHHHHHHT
T ss_pred HHHHHHHHH-CCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 467788888 4444578999999999999999888776666666777777899999999998865
No 24
>2g3q_A Protein YBL047C; endocytosis, solution structure, UBA domain, endocytosis/signaling protein complex; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1
Probab=95.68 E-value=0.016 Score=37.96 Aligned_cols=39 Identities=21% Similarity=0.330 Sum_probs=34.5
Q ss_pred hHHHHHHHHhhhCCCHHHHHHHHHhCCCChHHHHHhhcCC
Q psy9055 8 QKDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQN 47 (284)
Q Consensus 8 ~~~~i~qF~~iT~~s~~~A~~~L~~~~w~l~~A~~~fy~~ 47 (284)
..+.|++.+++ |-+++.|++.|..++||++.|++-.+.+
T Consensus 4 ~e~~i~~L~~M-GF~~~~a~~AL~~~~~n~e~A~~~L~~~ 42 (43)
T 2g3q_A 4 KSLAVEELSGM-GFTEEEAHNALEKCNWDLEAATNFLLDS 42 (43)
T ss_dssp HHHHHHHHHTT-TSCHHHHHHHHHHHTSCHHHHHHHHHTC
T ss_pred CHHHHHHHHHc-CCCHHHHHHHHHHhCcCHHHHHHHHHcC
Confidence 35789999996 9999999999999999999999977653
No 25
>2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus}
Probab=95.68 E-value=0.026 Score=39.45 Aligned_cols=66 Identities=12% Similarity=0.256 Sum_probs=54.5
Q ss_pred HHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHH
Q psy9055 61 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE 127 (284)
Q Consensus 61 ~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~ 127 (284)
...+..+|..| |.+..+.|+.+-+.+.+..+|+.+....+-.+...+....-|.|+.+||+..+..
T Consensus 6 ~~~l~~~F~~~-D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~ 71 (77)
T 2joj_A 6 KQEIKEAFDLF-DTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIGFDDFLDIMTE 71 (77)
T ss_dssp HHHHHHHHHHH-CCSSSSEEEHHHHHHHHHHHTCCCHHHHHHHHHHHHCCSSSSEEEHHHHHHHHTH
T ss_pred HHHHHHHHHHh-CCCCCCCCcHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 46788899998 4455578999999999999999987766666666777777899999999998765
No 26
>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A
Probab=95.67 E-value=0.48 Score=37.39 Aligned_cols=68 Identities=9% Similarity=0.207 Sum_probs=56.3
Q ss_pred cHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHh
Q psy9055 60 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 60 ~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 128 (284)
..+.+.++|..|- .+..+.|+.+-+.+++..+|+.+....+-.+...+....-|.|+.+||+..+...
T Consensus 26 ~~~~l~~~F~~~D-~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~ 93 (169)
T 3qrx_A 26 QKQEIREAFDLFD-TDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLTMMTAK 93 (169)
T ss_dssp HHHHHHHHHHHHC-TTCCSEECHHHHHHHHHHTSCCCCHHHHHHHHHHHCSSSSSSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhC-CCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHH
Confidence 3457788888883 3445799999999999999999988877777777888888999999999988763
No 27
>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A
Probab=95.61 E-value=0.057 Score=46.22 Aligned_cols=67 Identities=10% Similarity=0.035 Sum_probs=55.6
Q ss_pred HHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHh
Q psy9055 61 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 61 ~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 128 (284)
.+.+.++|..+- .+..+.|+.+-+.+.+..+|+.+....+-.+...+....-|.|+.+||+..+..+
T Consensus 50 ~~~l~~~F~~~D-~d~~G~I~~~El~~~l~~~g~~~~~~~~~~l~~~~D~d~dg~I~~~EF~~~~~~~ 116 (220)
T 3sjs_A 50 YTRIYQWFMGVD-RDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNGHISFYEFMAMYKFM 116 (220)
T ss_dssp HHHHHHHHHHHC-TTCCSSBCHHHHHHCCBGGGBCCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhC-CCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHH
Confidence 356777888884 3445789999999999999999888777777777888888999999999988874
No 28
>1vg5_A RSGI RUH-014, rhomboid family protein; UBA domain, cDNA, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: a.5.2.1
Probab=95.57 E-value=0.019 Score=42.43 Aligned_cols=43 Identities=9% Similarity=0.215 Sum_probs=38.1
Q ss_pred CcchHHHHHHHHhhhCCCHHHHHHHHHhCCCChHHHHHhhcCCC
Q psy9055 5 KSSQKDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQNP 48 (284)
Q Consensus 5 ~~~~~~~i~qF~~iT~~s~~~A~~~L~~~~w~l~~A~~~fy~~~ 48 (284)
....++.|++.+++ |-+++.|+..|+.++||++.|++-.+...
T Consensus 26 ~~~~ee~I~~L~eM-GF~r~~a~~AL~~~~~nve~Ave~Ll~~~ 68 (73)
T 1vg5_A 26 VAASEEQIQKLVAM-GFDRTQVEVALAAADDDLTVAVEILMSQS 68 (73)
T ss_dssp SCCCHHHHHHHHTT-TCCHHHHHHHHHHHTSCHHHHHHHHHTCS
T ss_pred CcccHHHHHHHHHc-CCCHHHHHHHHHHhCCCHHHHHHHHHHCC
Confidence 44567899999997 89999999999999999999999988753
No 29
>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A
Probab=95.57 E-value=0.073 Score=38.02 Aligned_cols=67 Identities=19% Similarity=0.166 Sum_probs=54.9
Q ss_pred cHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHh
Q psy9055 60 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 60 ~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 128 (284)
..+.+..+|..| |.+..+.|+.+-+.+.+..+| .+....+-.+...+....-|.|+.+||+..+...
T Consensus 9 ~~~~l~~~F~~~-D~d~~G~i~~~el~~~l~~~g-~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~ 75 (86)
T 2opo_A 9 DIADRERIFKRF-DTNGDGKISSSELGDALKTLG-SVTPDEVRRMMAEIDTDGDGFISFDEFTDFARAN 75 (86)
T ss_dssp HHHHHHHHHHHH-CTTCSSEEEHHHHHHHHHTTT-TCCHHHHHHHHHHHCTTCSSEECHHHHHHHHHHC
T ss_pred hHHHHHHHHHHH-CCCCCCCcCHHHHHHHHHHcC-CCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHC
Confidence 356788999999 445558999999999999999 7766666666667777778999999999998875
No 30
>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii}
Probab=95.57 E-value=0.62 Score=37.66 Aligned_cols=69 Identities=12% Similarity=0.150 Sum_probs=55.4
Q ss_pred cHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHc----CCCCCchHHHHHH-----------HhhcccccccccHHHHHHH
Q psy9055 60 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDL----SLSPESKLVLIIA-----------WRFKAAAQCEFSRDEFMNG 124 (284)
Q Consensus 60 ~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edL----gv~ped~~~LvLa-----------~~l~a~~~g~~tr~eF~~g 124 (284)
..+++.++|..|.|.+..+.|+.+-+.+.+..+ |..+.+..+-.|. ..+....-|.|+.+||+..
T Consensus 10 ~~~~l~~~F~~~~D~d~dG~i~~~E~~~~l~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~ 89 (191)
T 2ccm_A 10 QRNKILRVFNTFYDCNHDGVIEWDDFELAIKKICNLHSWPTDGKKHNEARATLKLIWDGLRKYADENEDEQVTKEEWLKM 89 (191)
T ss_dssp HHHHHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHHHHHH
T ss_pred HHHHHHHhccccccCCCCCeeeHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCeECHHHHHHH
Confidence 456899999999555556799999999999999 9988876654444 5566677899999999998
Q ss_pred HHHh
Q psy9055 125 MLEL 128 (284)
Q Consensus 125 ~~~l 128 (284)
+..+
T Consensus 90 ~~~~ 93 (191)
T 2ccm_A 90 WAEC 93 (191)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8774
No 31
>1ify_A HHR23A, UV excision repair protein RAD23 homolog A; ubiquitin associated domain, UBA domain, ubiquitin proteosome pathway, DNA binding protein; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=95.57 E-value=0.017 Score=39.26 Aligned_cols=40 Identities=8% Similarity=0.043 Sum_probs=35.5
Q ss_pred chHHHHHHHHhhhCCCHHHHHHHHHhCCCChHHHHHhhcCC
Q psy9055 7 SQKDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQN 47 (284)
Q Consensus 7 ~~~~~i~qF~~iT~~s~~~A~~~L~~~~w~l~~A~~~fy~~ 47 (284)
...+.|++.+++ |-++..|+..|++++||++.|++-.+..
T Consensus 7 ~~~~~i~~L~~M-GF~~~~a~~AL~~~~~n~e~A~e~L~~g 46 (49)
T 1ify_A 7 EYETMLTEIMSM-GYERERVVAALRASYNNPHRAVEYLLTG 46 (49)
T ss_dssp HHHHHHHHHHHT-TCCHHHHHHHHHTTTSCSHHHHHHHHHC
T ss_pred cCHHHHHHHHHc-CCCHHHHHHHHHHhCCCHHHHHHHHHhC
Confidence 346789999998 8999999999999999999999987754
No 32
>1jkg_B TAP; NTF2-like domain, transport protein; 1.90A {Homo sapiens} SCOP: d.17.4.2 PDB: 1jn5_B 1go5_A
Probab=95.54 E-value=0.0022 Score=57.73 Aligned_cols=45 Identities=16% Similarity=0.347 Sum_probs=0.0
Q ss_pred CCcchHHHHHHHHhhhCCCHHHHHHHHHhCCCChHHHHHhhcCCC
Q psy9055 4 LKSSQKDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQNP 48 (284)
Q Consensus 4 l~~~~~~~i~qF~~iT~~s~~~A~~~L~~~~w~l~~A~~~fy~~~ 48 (284)
++..|+++|.+|+..||.+.+-+..||+.++||++.|+..|-...
T Consensus 194 ~~~~q~~~v~~~~~~T~mn~~~s~~cL~~~~Wd~~~A~~~F~~l~ 238 (250)
T 1jkg_B 194 LSPEQQEMLQAFSTQSGMNLEWSQKCLQDNNWDYTRSAQAFTHLK 238 (250)
T ss_dssp ---------------------------------------------
T ss_pred CCHHHHHHHHHHHHHhCCCHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 445677899999999999999999999999999999999996553
No 33
>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus}
Probab=95.53 E-value=0.083 Score=39.18 Aligned_cols=67 Identities=10% Similarity=0.102 Sum_probs=55.0
Q ss_pred ccHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHH
Q psy9055 59 VDRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML 126 (284)
Q Consensus 59 ~~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~ 126 (284)
...+.+.++|..| |.+..+.|+.+-+.+.+..+|..+.+-.+--+...+....-|.|+.+||+..+.
T Consensus 26 ~~~~~l~~~F~~~-D~d~~G~I~~~El~~~l~~~g~~~~~~e~~~l~~~~D~d~dG~I~~~EF~~~~~ 92 (94)
T 2kz2_A 26 DSEEEIREAFRVE-DKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 92 (94)
T ss_dssp SCHHHHHHHHHHH-CTTCCSCBCHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred CHHHHHHHHHHHH-CCCCcCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence 3567899999999 444557899999999999999988776666666667777789999999998775
No 34
>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A
Probab=95.49 E-value=0.26 Score=37.74 Aligned_cols=68 Identities=13% Similarity=0.206 Sum_probs=56.6
Q ss_pred cHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHh
Q psy9055 60 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 60 ~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 128 (284)
..+.+..+|..|- .+..+.|+.+-+.+++..+|+.+....+-.+...+....-|.|+.+||+..+...
T Consensus 9 ~~~~l~~~F~~~D-~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~ef~~~~~~~ 76 (147)
T 4ds7_A 9 QIAEFKEAFALFD-KDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAIEFSEFLALMSRQ 76 (147)
T ss_dssp HHHHHHHHHHHHC-TTCSSEEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHC-CCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHHh
Confidence 3467888898884 3445789999999999999999988877777778888888999999999988763
No 35
>2jy5_A Ubiquilin-1; UBA, alternative splicing, cytoplasm, nucleus, phosphoprotein, proteasome, signaling protein; NMR {Homo sapiens} PDB: 2jy6_B
Probab=95.43 E-value=0.023 Score=39.06 Aligned_cols=39 Identities=5% Similarity=0.166 Sum_probs=34.7
Q ss_pred HHHHHHHHhhhCC-CHHHHHHHHHhCCCChHHHHHhhcCCC
Q psy9055 9 KDKVKRFISFTQT-GELTAINCLSQNDWKLDLASDNYFQNP 48 (284)
Q Consensus 9 ~~~i~qF~~iT~~-s~~~A~~~L~~~~w~l~~A~~~fy~~~ 48 (284)
.+.|++.+++ |- ++..|++.|++++||++.|++-.|.+|
T Consensus 13 ~~~l~~L~~M-GF~~~~~~~~AL~~t~gn~e~A~e~L~~~~ 52 (52)
T 2jy5_A 13 QQQLEQLSAM-GFLNREANLQALIATGGDINAAIERLLGSS 52 (52)
T ss_dssp HHHHHHHHHT-TCCCHHHHHHHHHHHTTCHHHHHHHHTTCC
T ss_pred HHHHHHHHHc-CCCCHHHHHHHHHHhCCCHHHHHHHHHhCc
Confidence 4789999998 77 889999999999999999999888764
No 36
>2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens}
Probab=95.19 E-value=0.071 Score=40.64 Aligned_cols=65 Identities=12% Similarity=0.222 Sum_probs=54.1
Q ss_pred cHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHH
Q psy9055 60 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGM 125 (284)
Q Consensus 60 ~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~ 125 (284)
..+.|.+.|+.| |.++.+.|+.+-+.+.+..||+.+.+-.+-.|...+....-|.|+-+||++-|
T Consensus 34 ~~~el~~~F~~~-D~d~~G~I~~~El~~~l~~lg~~~~~~ei~~l~~~~D~d~dG~I~~~EF~~~m 98 (100)
T 2lv7_A 34 ELEEIREAFKVF-DRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFVTLL 98 (100)
T ss_dssp GHHHHHHHHHHT-CSSCSSCBCHHHHHHHHHHHTCCCCTTTHHHHHHHHCSSCSSSBCHHHHHHHT
T ss_pred HHHHHHHHHHHH-cCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCeEeHHHHHHHh
Confidence 345788899999 54556899999999999999999887777677777777888999999999754
No 37
>1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A
Probab=95.17 E-value=0.035 Score=39.32 Aligned_cols=69 Identities=12% Similarity=0.067 Sum_probs=55.1
Q ss_pred cHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcC-CCCCchHHHHHHHhhcccccccccHHHHHHHHHHhCC
Q psy9055 60 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLS-LSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLELGC 130 (284)
Q Consensus 60 ~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLg-v~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~ 130 (284)
....+. +|..| |.+..+.|+.+-+.+.+..+| ..+....+-.+...+....-|.|+.+||+..+....+
T Consensus 7 ~~~~l~-~F~~~-D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~~~ 76 (81)
T 1c7v_A 7 EEEILR-AFKVF-DANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLIKKSKN 76 (81)
T ss_dssp CHHHHH-HHHHH-SCSGGGEECHHHHHHHSSTTTTCCCCHHHHHHHHHHHCSSGGGSEEHHHHHHHHHCC--
T ss_pred HHHHHH-HHHHH-CCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhhhh
Confidence 457889 99999 444457899999999999999 8877766666666777777899999999998887543
No 38
>1veg_A NEDD8 ultimate buster-1; ubiquitin associated domain, UBA domain, three helix bundle, structural genomics; NMR {Mus musculus} SCOP: a.5.2.1
Probab=95.15 E-value=0.026 Score=42.70 Aligned_cols=40 Identities=10% Similarity=0.164 Sum_probs=36.6
Q ss_pred hHHHHHHHHhhhCCCHHHHHHHHHhCCCChHHHHHhhcCCC
Q psy9055 8 QKDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQNP 48 (284)
Q Consensus 8 ~~~~i~qF~~iT~~s~~~A~~~L~~~~w~l~~A~~~fy~~~ 48 (284)
..+.|++.+++ |-++..|+..|+.++||++.|++-.|.++
T Consensus 29 ~ee~I~~Lv~M-GF~~~~A~~AL~~t~gdve~A~e~L~sh~ 68 (83)
T 1veg_A 29 SQESINQLVYM-GFDTVVAEAALRVFGGNVQLAAQTLAHHG 68 (83)
T ss_dssp CHHHHHHHHHH-SCCHHHHHHHHHHTTTCHHHHHHHHHHHT
T ss_pred CHHHHHHHHHc-CCCHHHHHHHHHHcCCCHHHHHHHHHhCC
Confidence 46789999998 99999999999999999999999999754
No 39
>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A
Probab=95.14 E-value=0.29 Score=38.11 Aligned_cols=67 Identities=12% Similarity=0.180 Sum_probs=55.8
Q ss_pred cHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHH
Q psy9055 60 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE 127 (284)
Q Consensus 60 ~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~ 127 (284)
..+.+.++|..| |.+..+.|+.+-+.+++..+|+.+....+-.+...+....-|.|+.+||+..+..
T Consensus 21 ~~~~l~~~F~~~-D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~ 87 (161)
T 3fwb_A 21 QKQEIYEAFSLF-DMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLMKYDDFYIVMGE 87 (161)
T ss_dssp HHHHHHHHHHHH-CTTSSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSCEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-CCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCcCCCCeEeHHHHHHHHHH
Confidence 345677788888 4445579999999999999999998887777777888888899999999998875
No 40
>1j7q_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1j7r_A
Probab=95.08 E-value=0.09 Score=37.61 Aligned_cols=66 Identities=12% Similarity=0.147 Sum_probs=53.1
Q ss_pred cHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchH---HHHHHHhhcccccccccHHHHHHHHHH
Q psy9055 60 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKL---VLIIAWRFKAAAQCEFSRDEFMNGMLE 127 (284)
Q Consensus 60 ~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~---~LvLa~~l~a~~~g~~tr~eF~~g~~~ 127 (284)
....+..+|..| |.+..+.|+.+-+...+..+|..+.... +-.+...+....-|.|+. +|+..+..
T Consensus 12 ~~~~l~~~F~~~-D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~d~~~~g~i~~-eF~~~~~~ 80 (86)
T 1j7q_A 12 EKDECMKIFDIF-DRNAENIAPVSDTMDMLTKLGQTYTKRETEAIMKEARGPKGDKKNIGPE-EWLTLCSK 80 (86)
T ss_dssp HHHHHHHHHHHH-STTTTSCBCHHHHHHHHHHTSCCCSHHHHHHHHHHHHCSSCSSCCBCTT-HHHHHHHH
T ss_pred HHHHHHHHHHHh-CCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCCCcCCH-HHHHHHHH
Confidence 346788899999 4445578999999999999999988776 555555666666799999 99998876
No 41
>1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10
Probab=95.06 E-value=0.054 Score=38.00 Aligned_cols=65 Identities=15% Similarity=0.215 Sum_probs=52.2
Q ss_pred HHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHh
Q psy9055 62 KKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 62 ~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 128 (284)
+.+..+|..| |.+..+.|+.+-+.+.+..+| .+.+..+-.+...+....-|.|+.+||+..+...
T Consensus 3 ~~l~~~F~~~-D~~~~G~i~~~el~~~l~~~g-~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~~ 67 (78)
T 1k9u_A 3 DDMERIFKRF-DTNGDGKISLSELTDALRTLG-STSADEVQRMMAEIDTDGDGFIDFNEFISFCNAN 67 (78)
T ss_dssp CHHHHHHHHH-CTTCSSEECHHHHHHHHHHHH-TCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHC
T ss_pred HHHHHHHHHH-CCCCCCcCcHHHHHHHHHHhC-CCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHC
Confidence 4688899998 445557899999999999999 7666555555566677778999999999988874
No 42
>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola}
Probab=95.04 E-value=0.37 Score=39.87 Aligned_cols=64 Identities=9% Similarity=0.205 Sum_probs=51.1
Q ss_pred HHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCC--CCCchHHHHHH-------HhhcccccccccHHHHHHHHH
Q psy9055 62 KKLESLYSKYKDASEPDKILVEGIMKFLDDLSL--SPESKLVLIIA-------WRFKAAAQCEFSRDEFMNGML 126 (284)
Q Consensus 62 ~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv--~ped~~~LvLa-------~~l~a~~~g~~tr~eF~~g~~ 126 (284)
+.+.++|..+ |.+..+.|+.+-+...+..+|. .|....+-.+. ..+....-|.|+.+||+..|.
T Consensus 36 ~~l~~~F~~~-D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~l~~~~~~lf~~~D~d~dg~i~~~EF~~~~~ 108 (208)
T 2hpk_A 36 SRLYKRFDTF-DLDSDGKMEMDEVLYWPDRMRQLVNATDEQVEKMRDAVRVFFLHKGVEPVNGLLREDWVEANR 108 (208)
T ss_dssp CHHHHHHHHH-CTTCSSEECHHHHTHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCBTTTBEEGGGHHHHHH
T ss_pred HHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHH
Confidence 5788899998 4445578999999999999998 77665554444 666677789999999999886
No 43
>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C*
Probab=95.03 E-value=0.088 Score=40.57 Aligned_cols=66 Identities=12% Similarity=0.148 Sum_probs=54.5
Q ss_pred HHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhh---cccccccccHHHHHHHHHHh
Q psy9055 61 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRF---KAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 61 ~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l---~a~~~g~~tr~eF~~g~~~l 128 (284)
...+.++|..|- .+..+.|+.+-+.+++..+|+.|....+-.+...+ .... |.|+.++|+..+...
T Consensus 7 ~~~l~~~F~~~D-~~~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~~~~d~~~-g~i~~~eF~~~~~~~ 75 (149)
T 2mys_C 7 ADDFKEAFLLFD-RTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNA-AAITFEEFLPMLQAA 75 (149)
T ss_pred HHHHHHHHHHhC-CCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhhhccccC-CcCcHHHHHHHHHHH
Confidence 457888899884 34457899999999999999999877777777777 6666 999999999988875
No 44
>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A
Probab=94.88 E-value=0.28 Score=39.24 Aligned_cols=68 Identities=13% Similarity=0.083 Sum_probs=52.6
Q ss_pred cHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcC-CCCCchHHHHHHHhhcccccccccHHHHHHHHHHh
Q psy9055 60 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLS-LSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 60 ~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLg-v~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 128 (284)
..+.+.++|..+- .+..+.|+.+-+.+.+..+| ..+....+-.+...+....-|.|+.+||+..+..+
T Consensus 5 ~~~~l~~~F~~~D-~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~ef~~~~~~~ 73 (172)
T 2znd_A 5 DQSFLWNVFQRVD-KDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKYI 73 (172)
T ss_dssp -CHHHHHHHHHHC-TTCSSCEEHHHHHHHCCCSSSSCCCHHHHHHHHHHHCSSSSSEECHHHHHHHHHHH
T ss_pred chhHHHHHHHHhC-CCCCCcCcHHHHHHHHHhcCCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHH
Confidence 4578999999993 33447899999999999999 55655555555666777778999999999988763
No 45
>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8
Probab=94.81 E-value=0.5 Score=38.87 Aligned_cols=68 Identities=13% Similarity=0.106 Sum_probs=55.2
Q ss_pred cHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHh
Q psy9055 60 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 60 ~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 128 (284)
..+++.++|..+- .+..+.|+.+-+.+.+..+|..+....+-.+...+....-|.|+.+||+..+..+
T Consensus 25 ~~~~l~~~F~~~D-~d~~G~I~~~El~~~l~~~~~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~~ 92 (191)
T 1y1x_A 25 DNQELMEWFRAVD-TDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGEITFDEFKDLHHFI 92 (191)
T ss_dssp TTSCHHHHHHHHC-TTCSSSBCHHHHHHHHCBTTBCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHc-CCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHH
Confidence 4578999999993 3344789999999999888888877666666677777778999999999988763
No 46
>1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand, helix-loop- helix, nervous system, metal binding protein; NMR {Haemopis marmorata} PDB: 1yx8_A
Probab=94.79 E-value=0.068 Score=37.82 Aligned_cols=67 Identities=19% Similarity=0.262 Sum_probs=48.2
Q ss_pred HHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcC--CCC--CchHHHH--HHHhhcccccccccHHHHHHHHHHh
Q psy9055 61 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLS--LSP--ESKLVLI--IAWRFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 61 ~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLg--v~p--ed~~~Lv--La~~l~a~~~g~~tr~eF~~g~~~l 128 (284)
...+..+|..| |.+..+.|+.+-+.+.+..+| ..+ +.+..++ +...+....-|.|+.+||+.....+
T Consensus 6 ~~~l~~~F~~~-D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~~D~~~dg~I~~~eF~~~~~~~ 78 (83)
T 1yx7_A 6 KAELEAAFKKL-DANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADKNSDGKISKEEFLNANAEL 78 (83)
T ss_dssp CTHHHHHHHHH-SSSCSSSCSHHHHHHHHHHHTTCTTTTTTTTHHHHHHHHTTTCSSSCSCCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-CCCCCCcCcHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHhhHHH
Confidence 35788999999 444557899999999999999 444 4343321 3334445667999999999776653
No 47
>2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A
Probab=94.78 E-value=0.29 Score=38.57 Aligned_cols=125 Identities=12% Similarity=0.082 Sum_probs=81.2
Q ss_pred CCCCCcchHHHHH-HHHhh----hCC-CHHHHHHHHHhCCCChHHH-HH----hhcCCCccc---------h-hccCCcc
Q psy9055 1 MHKLKSSQKDKVK-RFISF----TQT-GELTAINCLSQNDWKLDLA-SD----NYFQNPSAY---------Y-KEQKSSV 59 (284)
Q Consensus 1 m~~l~~~~~~~i~-qF~~i----T~~-s~~~A~~~L~~~~w~l~~A-~~----~fy~~~~~~---------~-~~~~~~~ 59 (284)
|+.|+..|-+.++ -|..+ .|. +...-..+|+..+.++..+ +. .+-.+..+. . .......
T Consensus 1 Ms~lt~eqi~el~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~ 80 (148)
T 2lmt_A 1 MSELTEEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNFTEFCGIMAKQMRETD 80 (148)
T ss_dssp CCSCCSHHHHHHHHHHHHHHCSSCCEEEGGGHHHHHHHHTCCCCHHHHHHHHHHHHTTSTTEEEHHHHHHHHHHTTTTTT
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCCCeECHHHHHHHHHhcCCCchHHHHHHHHHhcccCCCCcccHHHHHHHHHHHhcccC
Confidence 7788888877665 35444 122 4445556666666654332 22 222222211 0 1112233
Q ss_pred cHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHH
Q psy9055 60 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML 126 (284)
Q Consensus 60 ~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~ 126 (284)
....|...|..| |.++.+.|+.+-+.+.+..+|..+.+..+-.|...+-...-|.|+-+||++-|.
T Consensus 81 ~~~~l~~aF~~~-D~d~~G~I~~~El~~~l~~~g~~~~~~e~~~l~~~~D~d~dG~I~~~EF~~~m~ 146 (148)
T 2lmt_A 81 TEEEMREAFKIF-DRDGDGFISPAELRFVMINLGEKVTDEEIDEMIREADFDGDGMINYEEFVWMIS 146 (148)
T ss_dssp THHHHHHHHHHH-HSSCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCCSCCSSEEHHHHHHHHT
T ss_pred cHHHHHHHHHHH-CCCCcCcCcHHHHHHHHHHcCccccHHHHHHHHHHhCCCCCCeEeHHHHHHHHh
Confidence 457799999998 444557999999999999999998877766666666677789999999998664
No 48
>2dkl_A Trinucleotide repeat containing 6C protein; TNRC6C, KIAA1582 protein, UBA domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=94.73 E-value=0.049 Score=41.30 Aligned_cols=39 Identities=18% Similarity=0.218 Sum_probs=35.8
Q ss_pred HHHHHHHHhhhCCCHHHHHHHHHhCCCChHHHHHhhcCCC
Q psy9055 9 KDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQNP 48 (284)
Q Consensus 9 ~~~i~qF~~iT~~s~~~A~~~L~~~~w~l~~A~~~fy~~~ 48 (284)
.+.|++++++ |.++..|++.|..++||++.|++-.|.++
T Consensus 22 ~~~I~qL~~M-GF~~~~a~~AL~~~n~n~e~A~ewL~~h~ 60 (85)
T 2dkl_A 22 SRLIKQLTDM-GFPREPAEEALKSNNMNLDQAMSALLEKK 60 (85)
T ss_dssp HHHHHHHHHH-TCCHHHHHHHHHHTTSCHHHHHHHHHTTS
T ss_pred HHHHHHHHHc-CCCHHHHHHHHHHcCCCHHHHHHHHHHCc
Confidence 5779999996 99999999999999999999999998765
No 49
>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ...
Probab=94.72 E-value=0.13 Score=40.35 Aligned_cols=69 Identities=13% Similarity=0.120 Sum_probs=53.5
Q ss_pred cHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHhC
Q psy9055 60 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLELG 129 (284)
Q Consensus 60 ~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~ 129 (284)
....+..+|..| |.+..+.|+.+-+.+++..+|..+.+..+-.+...+....-|.|+.+||+.-+..++
T Consensus 94 ~~~~~~~~F~~~-D~d~~G~I~~~e~~~~l~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~ 162 (162)
T 1top_A 94 SEEELANCFRIF-DKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMMEGVQ 162 (162)
T ss_dssp HHHHHHHHHHHH-CTTCSSCBCHHHHHHHHHTTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHSCC
T ss_pred cHHHHHHHHHHh-CCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhhcC
Confidence 345688889888 444557899999999999999777666555556666667779999999999887653
No 50
>2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein; 1.90A {Homo sapiens}
Probab=94.69 E-value=0.096 Score=39.42 Aligned_cols=68 Identities=15% Similarity=0.225 Sum_probs=55.3
Q ss_pred HHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHhC
Q psy9055 61 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLELG 129 (284)
Q Consensus 61 ~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~ 129 (284)
...+..+|..| |.+..+.|+.+-+...+..+|..+....+-.+...+....-|.|+.++|+..+....
T Consensus 31 ~~~l~~~F~~~-D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~l~~~~D~d~dg~i~~~eF~~~~~~~~ 98 (107)
T 2d58_A 31 LEGFKEKYMEF-DLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLGKR 98 (107)
T ss_dssp HHHHHHHHTTS-CCCTTSCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSSSSEECHHHHHHHHSSSS
T ss_pred HHHHHHHHHHH-CCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHcc
Confidence 35678888888 555557999999999999999998877766666677777789999999999887654
No 51
>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ...
Probab=94.63 E-value=0.8 Score=35.59 Aligned_cols=67 Identities=13% Similarity=0.183 Sum_probs=54.8
Q ss_pred HHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHh
Q psy9055 61 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 61 ~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 128 (284)
.+.+.++|..| |.+..+.|+.+-+..++..+|+.+....+-.+...+....-|.|+.+||+..+...
T Consensus 19 ~~~l~~~F~~~-D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~ 85 (162)
T 1top_A 19 IAEFKAAFDMF-DADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQ 85 (162)
T ss_dssp HHHHHHHHHTT-TCSCSSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHCTTSCCEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-CCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHcCCCCCcEeHHHHHHHHHHH
Confidence 45677888777 43445789999999999999999887777777777777778999999999988764
No 52
>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ...
Probab=94.57 E-value=0.14 Score=40.21 Aligned_cols=68 Identities=12% Similarity=0.179 Sum_probs=56.2
Q ss_pred cHHHHHHHHHHhcCCCC-CCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHh
Q psy9055 60 DRKKLESLYSKYKDASE-PDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 60 ~~~~l~~lFd~Y~d~~~-~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 128 (284)
..+.+..+|..|- .+. .+.|+.+-+..++..+|+.+....+-.+...+....-|.|+.+||+..+...
T Consensus 16 ~~~~l~~~F~~~D-~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~eF~~~~~~~ 84 (161)
T 1dtl_A 16 QKNEFKAAFDIFV-LGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRS 84 (161)
T ss_dssp HHHHHHHHHHHHT-TTCGGGSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHc-CCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHH
Confidence 3467888898884 444 5789999999999999999887777667777777788999999999998875
No 53
>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5
Probab=94.55 E-value=0.15 Score=40.54 Aligned_cols=68 Identities=10% Similarity=0.161 Sum_probs=54.3
Q ss_pred HHHHHHHHHHhcCCCCCCccCHHHHHH----HHHHcCCCCCchHHH-----------HHHHhhcccccccccHHHHHHHH
Q psy9055 61 RKKLESLYSKYKDASEPDKILVEGIMK----FLDDLSLSPESKLVL-----------IIAWRFKAAAQCEFSRDEFMNGM 125 (284)
Q Consensus 61 ~~~l~~lFd~Y~d~~~~~~I~~dG~~~----~~edLgv~ped~~~L-----------vLa~~l~a~~~g~~tr~eF~~g~ 125 (284)
.+++.++|..| |.+..+.|+.+-+.+ ++..+|++|....+- .+...+....-|.|+.+||+..+
T Consensus 6 ~~~l~~~F~~~-D~d~~G~i~~~el~~~~~~~l~~~g~~~~~~~~~~l~~~~~~~~~~lf~~~D~d~dg~i~~~Ef~~~~ 84 (176)
T 1nya_A 6 SDRLKKRFDRW-DFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLAKEAGVGSDGSLTEEQFIRVT 84 (176)
T ss_dssp HHHHHHHHHHC-CSSCCSSBCSHHHHHHHHHHHHHTSSCSSSHHHHHHHHHHHHHHHHHHHHHTSCTTCCBCHHHHHHHH
T ss_pred HHHHHHHHHHH-cCCCCCcccHHHHHHHHHHHHHHcCCCCCcHHHHHHHHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHH
Confidence 46889999999 444557899999998 789999999876654 34455666778999999999998
Q ss_pred HHhC
Q psy9055 126 LELG 129 (284)
Q Consensus 126 ~~l~ 129 (284)
..+.
T Consensus 85 ~~~~ 88 (176)
T 1nya_A 85 ENLI 88 (176)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8754
No 54
>1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7
Probab=94.51 E-value=0.11 Score=38.63 Aligned_cols=68 Identities=7% Similarity=0.061 Sum_probs=52.7
Q ss_pred HHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHhC
Q psy9055 61 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLELG 129 (284)
Q Consensus 61 ~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~ 129 (284)
...+..+|..| |.+..+.|+.+-+.+.+..+|..+....+-.|...+....-|.|+.++|+..+....
T Consensus 23 ~~~l~~~F~~~-D~d~~G~i~~~el~~~l~~~g~~~~~~e~~~l~~~~d~~~~g~i~~~eF~~~~~~~~ 90 (105)
T 1wlz_A 23 YHAITQEFENF-DTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGRLKYPDFLSRFSSET 90 (105)
T ss_dssp HHHHHHHHHHH-CTTCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTSCBCTTSCBCHHHHHHHHC---
T ss_pred HHHHHHHHHHH-CCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCCCCCCcHHHHHHHHhccC
Confidence 46788899998 445557899999999999999988776665555556666679999999999887644
No 55
>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A
Probab=94.50 E-value=0.15 Score=39.85 Aligned_cols=67 Identities=12% Similarity=0.248 Sum_probs=54.4
Q ss_pred cHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHH
Q psy9055 60 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE 127 (284)
Q Consensus 60 ~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~ 127 (284)
....+..+|..| |.+..+.|+.+-+.+++..+|..+.+-.+-.+...+....-|.|+.+||++.++.
T Consensus 94 ~~~~~~~~F~~~-D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~ 160 (161)
T 3fwb_A 94 PLDEIKRAFQLF-DDDHTGKISIKNLRRVAKELGETLTDEELRAMIEEFDLDGDGEINENEFIAICTD 160 (161)
T ss_dssp HHHHHHHHHHHH-CTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHTTCSSSSSSEEHHHHHHHHHH
T ss_pred cHHHHHHHHHHH-cCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhc
Confidence 356788889988 4445578999999999999998888777766777777777899999999988764
No 56
>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=94.43 E-value=0.11 Score=39.88 Aligned_cols=66 Identities=14% Similarity=0.171 Sum_probs=55.6
Q ss_pred HHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHH
Q psy9055 61 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE 127 (284)
Q Consensus 61 ~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~ 127 (284)
.+.+.++|..|- .+..+.|+.+-+.+++..+|+.+....+-.|...+....-|.|+.+||+..+..
T Consensus 5 ~~~l~~~F~~~D-~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~ 70 (142)
T 2bl0_C 5 VSEFKEAFELFD-SERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQFPEFLSMMGR 70 (142)
T ss_dssp HHHHHHHHHHHC-TTCSSEEEHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHhC-CCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCcCCCCeeeHHHHHHHHHH
Confidence 467889999984 344578999999999999999998877777777777777899999999999886
No 57
>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5
Probab=94.42 E-value=0.72 Score=36.62 Aligned_cols=69 Identities=10% Similarity=0.059 Sum_probs=53.3
Q ss_pred cHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcC----CCCCchHHHHH-----------HHhhcccccccccHHHHHHH
Q psy9055 60 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLS----LSPESKLVLII-----------AWRFKAAAQCEFSRDEFMNG 124 (284)
Q Consensus 60 ~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLg----v~ped~~~LvL-----------a~~l~a~~~g~~tr~eF~~g 124 (284)
..+++..+|..|.|.+..+.|+.+-+...+..+| ..+....+-.| ...+....-|.|+.+||+..
T Consensus 6 ~~~~l~~~F~~~~D~d~dG~i~~~E~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~ 85 (185)
T 2sas_A 6 QKQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDEWRDLKGRADINKDDVVSWEEYLAM 85 (185)
T ss_dssp HHHHHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHHHHHH
T ss_pred HHHHHHHHHHHheeCCCCCeEcHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEcHHHHHHH
Confidence 4578999999994444557999999999999988 77776554333 44555667899999999999
Q ss_pred HHHh
Q psy9055 125 MLEL 128 (284)
Q Consensus 125 ~~~l 128 (284)
+..+
T Consensus 86 ~~~~ 89 (185)
T 2sas_A 86 WEKT 89 (185)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8775
No 58
>3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A
Probab=94.41 E-value=0.98 Score=35.10 Aligned_cols=67 Identities=13% Similarity=0.249 Sum_probs=50.7
Q ss_pred HHHHHHHHHHhcCCCCCCccCHHHHHHH----HHHcCCCCCchHHHHH-----------HHhhcccccccccHHHHHHHH
Q psy9055 61 RKKLESLYSKYKDASEPDKILVEGIMKF----LDDLSLSPESKLVLII-----------AWRFKAAAQCEFSRDEFMNGM 125 (284)
Q Consensus 61 ~~~l~~lFd~Y~d~~~~~~I~~dG~~~~----~edLgv~ped~~~LvL-----------a~~l~a~~~g~~tr~eF~~g~ 125 (284)
.+++..+|..| |.+..+.|+.+-+.+. +..+|+.|....+-.| ...+....-|.|+.+||+..+
T Consensus 3 ~~~l~~~F~~~-D~d~dG~i~~~E~~~~l~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~ 81 (166)
T 3akb_A 3 ERRIAARFTTF-DQDGNGHIDRSDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQGLAGIADRDGDQRITREEFVTGA 81 (166)
T ss_dssp HHHHHHHHHHH-CTTCSSEECHHHHHHHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHHHHHCTTSSSCEEHHHHHHTH
T ss_pred HHHHHHHHhHH-cCCCCCCcCHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence 46789999998 4455578999998886 5677999887655333 245566677999999999988
Q ss_pred HHh
Q psy9055 126 LEL 128 (284)
Q Consensus 126 ~~l 128 (284)
..+
T Consensus 82 ~~~ 84 (166)
T 3akb_A 82 VKR 84 (166)
T ss_dssp HHH
T ss_pred HHH
Confidence 775
No 59
>1wiv_A UBP14, ubiquitin-specific protease 14; ubiquitin associated domain, UBA domain, three helix bundle, structural genomics; NMR {Arabidopsis thaliana} SCOP: a.5.2.1
Probab=94.40 E-value=0.058 Score=39.66 Aligned_cols=41 Identities=24% Similarity=0.326 Sum_probs=36.5
Q ss_pred hHHHHHHHHhhhCCCHHHHHHHHHhCCCChHHHHHhhcCCCc
Q psy9055 8 QKDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQNPS 49 (284)
Q Consensus 8 ~~~~i~qF~~iT~~s~~~A~~~L~~~~w~l~~A~~~fy~~~~ 49 (284)
..+.|++.+++ |-++..|++.|+.++||++.|++-.|+++.
T Consensus 29 ~~~~v~~L~~M-GF~~~~a~~AL~~t~~nve~Ave~L~~~~~ 69 (73)
T 1wiv_A 29 DQSSVDTLLSF-GFAEDVARKALKASGGDIEKATDWVFNNSG 69 (73)
T ss_dssp CHHHHHHHHHH-TCCHHHHHHHHHHTTSCHHHHHHHHHHSCC
T ss_pred CHHHHHHHHHc-CCCHHHHHHHHHHhCCCHHHHHHHHHhCCC
Confidence 45789999987 899999999999999999999999887653
No 60
>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica}
Probab=94.34 E-value=0.017 Score=39.13 Aligned_cols=63 Identities=17% Similarity=0.263 Sum_probs=48.7
Q ss_pred HHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHh
Q psy9055 65 ESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 65 ~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 128 (284)
..+|..| |.+..+.|+.+-+..++..+|..+....+-.+...+....-|.|+.+||+..++.+
T Consensus 3 ~~~F~~~-D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~ef~~~~~~~ 65 (66)
T 3li6_A 3 EALFKEI-DVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSI 65 (66)
T ss_dssp CHHHHHH-CTTCSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSSSCCHHHHHHHHTCC
T ss_pred HHHHHHH-CCCCCCcccHHHHHHHHHHccCCCcHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhc
Confidence 4578777 43445789999999999999977665555555666677778999999999988654
No 61
>1wji_A Tudor domain containing protein 3; UBA domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=94.22 E-value=0.051 Score=38.85 Aligned_cols=40 Identities=13% Similarity=0.156 Sum_probs=35.6
Q ss_pred hHHHHHHHHhhhCCCHHHHHHHHHhCCCChHHHHHhhcCCC
Q psy9055 8 QKDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQNP 48 (284)
Q Consensus 8 ~~~~i~qF~~iT~~s~~~A~~~L~~~~w~l~~A~~~fy~~~ 48 (284)
..+.|++.+++ |-++..|++.|..++||++.|++-.+.+.
T Consensus 9 ~~~~I~~L~~M-GF~~~~a~~AL~~~~~nve~A~e~L~~~~ 48 (63)
T 1wji_A 9 DEKALKHITEM-GFSKEASRQALMDNGNNLEAALNVLLTSN 48 (63)
T ss_dssp CHHHHHHHHTT-TCCHHHHHHHHHHTTSCHHHHHHHHHHHS
T ss_pred CHHHHHHHHHc-CCCHHHHHHHHHHhCCCHHHHHHHHHHCC
Confidence 46789999985 99999999999999999999999888653
No 62
>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B*
Probab=94.19 E-value=0.13 Score=39.90 Aligned_cols=72 Identities=15% Similarity=0.123 Sum_probs=56.6
Q ss_pred ccHHHHHHHHHHhcCCCCCCccCHHHHHHHHHH-cCCCCCchHHHHHHHh----hcccccccccHHHHHHHHHHhCCC
Q psy9055 59 VDRKKLESLYSKYKDASEPDKILVEGIMKFLDD-LSLSPESKLVLIIAWR----FKAAAQCEFSRDEFMNGMLELGCD 131 (284)
Q Consensus 59 ~~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~ed-Lgv~ped~~~LvLa~~----l~a~~~g~~tr~eF~~g~~~l~~~ 131 (284)
.....+..+|..| |.+..+.|+.+-+.+++.. +|..+.+-.+-.+... +....-|.|+.+||+..+..+++.
T Consensus 72 ~~~~~~~~~F~~~-D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~~~~ 148 (155)
T 3ll8_B 72 DKEQKLRFAFRIY-DMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVVGGLDIH 148 (155)
T ss_dssp CHHHHHHHHHHHH-CTTCSSCBCHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHCTTSSSSBCHHHHHHHHGGGCGG
T ss_pred CHHHHHHHHHHHh-CCCCCCcCcHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHhccCch
Confidence 3457889999998 4445578999999999998 6877766555555554 677778999999999999998763
No 63
>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A
Probab=94.13 E-value=0.16 Score=39.82 Aligned_cols=68 Identities=13% Similarity=0.180 Sum_probs=56.2
Q ss_pred HHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHh
Q psy9055 61 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 61 ~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 128 (284)
.+.+.++|..|-..+..+.|+.+-+.+++..+|+.+....+-.|...+....-|.|+.+||+..+...
T Consensus 12 ~~~l~~~F~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~ 79 (158)
T 2jnf_A 12 VKLLETAFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFGNGDIDFDSFKIIGARF 79 (158)
T ss_dssp HHHHHHHHHHSBCSSSCSSEEHHHHHHHHHHTTCSCSHHHHHHHHHHHCTTCCSEECHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 45788889888513445789999999999999999987777777777777778999999999998875
No 64
>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4
Probab=94.13 E-value=0.19 Score=37.39 Aligned_cols=67 Identities=10% Similarity=0.110 Sum_probs=54.0
Q ss_pred cHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHc---CCCCCchHHHHHHHhhcccccccccHHHHHHHHHH
Q psy9055 60 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDL---SLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE 127 (284)
Q Consensus 60 ~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edL---gv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~ 127 (284)
....+..+|..| |.+..+.|+.+-+.+.+..+ |..+.+..+--+...+....-|.|+.+||+.-+++
T Consensus 39 ~~~~l~~~F~~~-D~d~~G~i~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~ 108 (109)
T 5pal_A 39 TDAQVKEVFEIL-DKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDGKIGADEFAKMVAQ 108 (109)
T ss_dssp CHHHHHHHHHHH-CTTCSSEECHHHHHTHHHHHCTTCCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred cHHHHHHHHHHH-CCCCCCcCcHHHHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence 467899999999 44455789999999999999 88887666555555666677899999999998775
No 65
>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum}
Probab=94.11 E-value=0.47 Score=38.54 Aligned_cols=66 Identities=17% Similarity=0.200 Sum_probs=50.3
Q ss_pred HHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHhC
Q psy9055 61 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLELG 129 (284)
Q Consensus 61 ~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~ 129 (284)
...+.++|..+ |.+..+.|+.+-+.+++..+|++++.+ -.+...+....-|.|+.+||+..+..+.
T Consensus 38 ~~~l~~~F~~~-D~d~~G~i~~~El~~~l~~~g~~~~~~--~~~~~~~D~d~~g~i~~~Ef~~~~~~~~ 103 (180)
T 3mse_B 38 IKYINELFYKL-DTNHNGSLSHREIYTVLASVGIKKWDI--NRILQALDINDRGNITYTEFMAGCYRWK 103 (180)
T ss_dssp HHHHHHHHHHH-CTTCSSSEEHHHHHHHHHHTTCCHHHH--HHHHHHHCTTCCSEECHHHHHHHHSCCT
T ss_pred HHHHHHHHHHh-CCCCCCcCCHHHHHHHHHHcCCCHHHH--HHHHHHhCCCCCCcCcHHHHHHHHHhcc
Confidence 46788899988 444557899999999999999986433 3344455566789999999998887643
No 66
>2dah_A Ubiquilin-3; UBA domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=94.07 E-value=0.035 Score=38.54 Aligned_cols=40 Identities=13% Similarity=0.118 Sum_probs=34.2
Q ss_pred HHHHHHHHhhhCCCHH-HHHHHHHhCCCChHHHHHhhcCCCc
Q psy9055 9 KDKVKRFISFTQTGEL-TAINCLSQNDWKLDLASDNYFQNPS 49 (284)
Q Consensus 9 ~~~i~qF~~iT~~s~~-~A~~~L~~~~w~l~~A~~~fy~~~~ 49 (284)
.+.|++.+++ |-++. .+++.|++++||++.||+..|..+.
T Consensus 10 ~~~l~~L~~M-GF~d~~~n~~AL~~~~Gdv~~Ave~L~~~~~ 50 (54)
T 2dah_A 10 QVQLEQLRSM-GFLNREANLQALIATGGDVDAAVEKLRQSSG 50 (54)
T ss_dssp HHHHHHHHHH-TCCCHHHHHHHHHHHTSCHHHHHHHHHHHSC
T ss_pred HHHHHHHHHc-CCCcHHHHHHHHHHcCCCHHHHHHHHHhCCC
Confidence 5779999988 88665 5699999999999999999997653
No 67
>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A
Probab=94.00 E-value=0.39 Score=40.74 Aligned_cols=68 Identities=4% Similarity=0.095 Sum_probs=52.5
Q ss_pred ccHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCc------hHHHHHHHhhcccccccccHHHHHHHHHH
Q psy9055 59 VDRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPES------KLVLIIAWRFKAAAQCEFSRDEFMNGMLE 127 (284)
Q Consensus 59 ~~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped------~~~LvLa~~l~a~~~g~~tr~eF~~g~~~ 127 (284)
...+.|..+|..|- .+..+.|+.+-+.+.+..||+.|.. ..+--+...+....-|.|+.+||+..+..
T Consensus 13 ~~~~~l~~~F~~~D-~d~~G~i~~~El~~~l~~l~~~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~Ef~~~~~~ 86 (263)
T 2f33_A 13 ITASQFFEIWLHFD-ADGSGYLEGKELQNLIQELLQARKKAGLELSPEMKTFVDQYGQRDDGKIGIVELAHVLPT 86 (263)
T ss_dssp CCHHHHHHHHHHHC-TTCSSSBCSHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHTTGGGCCBCHHHHHHHTTS
T ss_pred ccHHHHHHHHHHhC-CCCCCCcCHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHhCCCCCCcCcHHHHHHHHhh
Confidence 45678999999994 3445789999999999999887653 33334555666777899999999998754
No 68
>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A
Probab=93.98 E-value=0.27 Score=39.38 Aligned_cols=68 Identities=13% Similarity=0.175 Sum_probs=56.6
Q ss_pred cHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHh
Q psy9055 60 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 60 ~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 128 (284)
..+.+.++|..| |.+..+.|+.+-+..++..+|+.+....+-.+...+....-|.|+.+||+..+...
T Consensus 9 ~~~~l~~~F~~~-D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~EF~~~~~~~ 76 (179)
T 2f2o_A 9 QIAEFKEAFSLF-DKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARK 76 (179)
T ss_dssp HHHHHHHHHHHH-CTTCSSCBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-CCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhccCCCCCCcHHHHHHHHHHH
Confidence 346788999888 44445789999999999999999988777777777888888999999999988663
No 69
>2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens}
Probab=93.96 E-value=0.18 Score=36.88 Aligned_cols=65 Identities=18% Similarity=0.304 Sum_probs=48.9
Q ss_pred HHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHh
Q psy9055 61 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 61 ~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 128 (284)
...+..+|..|- .+..+.|+.+-+.+++..+|++.+.+. .+...+....-|.|+.+||+..+.++
T Consensus 26 ~~~l~~~F~~~D-~d~~G~I~~~El~~~l~~~g~~~~~~~--~~~~~~D~d~dg~I~~~EF~~~~~~~ 90 (91)
T 2pmy_A 26 LARLRSVFAACD-ANRSGRLEREEFRALCTELRVRPADAE--AVFQRLDADRDGAITFQEFARGFLGS 90 (91)
T ss_dssp HHHHHHHHHHHC-TTCSSSEEHHHHHHHHHHTTCCHHHHH--HHHHHHCTTCSSEECHHHHTHHHHHT
T ss_pred HHHHHHHHHHHC-CCCCCCCcHHHHHHHHHHcCcCHHHHH--HHHHHhCCCCCCCEeHHHHHHHHHHH
Confidence 356788899884 444578999999999999997554433 33344556667999999999988764
No 70
>2dak_A Ubiquitin carboxyl-terminal hydrolase 5; isopeptidase T, ubiquitin specific protease 5, USP 5, UBA domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=93.86 E-value=0.074 Score=37.77 Aligned_cols=39 Identities=23% Similarity=0.273 Sum_probs=35.2
Q ss_pred hHHHHHHHHhhhCCCHHHHHHHHHhCCCChHHHHHhhcCC
Q psy9055 8 QKDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQN 47 (284)
Q Consensus 8 ~~~~i~qF~~iT~~s~~~A~~~L~~~~w~l~~A~~~fy~~ 47 (284)
..+.|++.+++ |-+++.|++.|+.++||++.|++-.+.+
T Consensus 9 ~~~~v~~L~~M-GF~~~~a~~AL~~t~~nve~A~e~L~~~ 47 (63)
T 2dak_A 9 PEDCVTTIVSM-GFSRDQALKALRATNNSLERAVDWIFSH 47 (63)
T ss_dssp CHHHHHHHHHH-TCCHHHHHHHHHHTTSCSHHHHHHHHHH
T ss_pred CHHHHHHHHHc-CCCHHHHHHHHHHcCCCHHHHHHHHHhC
Confidence 46789999996 9999999999999999999999988864
No 71
>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A
Probab=93.84 E-value=0.2 Score=37.11 Aligned_cols=66 Identities=11% Similarity=0.065 Sum_probs=52.7
Q ss_pred cHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHc---CCCCCchHHHHHHHhhcccccccccHHHHHHHHH
Q psy9055 60 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDL---SLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML 126 (284)
Q Consensus 60 ~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edL---gv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~ 126 (284)
....+..+|..| |.+..+.|+.+-+.+++..+ |..+.+..+-.+...+....-|.|+.+||+..++
T Consensus 39 ~~~~l~~~F~~~-D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~ 107 (108)
T 2pvb_A 39 SLDDVKKAFYVI-DQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLADGDKDGDGMIGVDEFAAMIK 107 (108)
T ss_dssp CHHHHHHHHHHH-CTTCSSSBCHHHHHTGGGGTCTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred HHHHHHHHHHHH-CCCCCCcCCHHHHHHHHHHHhccCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence 457899999999 44555789999999999999 7777766655555566667789999999998765
No 72
>2knz_A Ubiquilin-4; cytoplasm, endoplasmic reticulum, nucleus, phosphoprotein, protein binding; NMR {Mus musculus}
Probab=93.83 E-value=0.082 Score=36.33 Aligned_cols=39 Identities=8% Similarity=0.162 Sum_probs=34.3
Q ss_pred HHHHHHHHhhhCC-CHHHHHHHHHhCCCChHHHHHhhcCCC
Q psy9055 9 KDKVKRFISFTQT-GELTAINCLSQNDWKLDLASDNYFQNP 48 (284)
Q Consensus 9 ~~~i~qF~~iT~~-s~~~A~~~L~~~~w~l~~A~~~fy~~~ 48 (284)
.+.|++.+++ |- ++..|+..|++++||++.|++-.+..+
T Consensus 12 ~~~l~~L~~M-GF~~~~~~~~AL~~t~gnve~Ave~L~~~~ 51 (53)
T 2knz_A 12 QQQLEQLNSM-GFINREANLQALIATGGDINAAIERLLGSQ 51 (53)
T ss_dssp HHHHHHHHTT-TCCCHHHHHHHHHHHTSCHHHHHHHHHHCC
T ss_pred HHHHHHHHHc-CCCCHHHHHHHHHHhCCCHHHHHHHHHHcC
Confidence 4568999998 56 899999999999999999999988764
No 73
>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A
Probab=93.77 E-value=0.22 Score=39.35 Aligned_cols=66 Identities=14% Similarity=0.237 Sum_probs=53.1
Q ss_pred HHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHH
Q psy9055 61 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE 127 (284)
Q Consensus 61 ~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~ 127 (284)
...+..+|..| |.+..+.|+.+-+.+++..+|..+.+-.+-.+...+....-|.|+.+||+..++.
T Consensus 100 ~~~~~~~F~~~-D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~ 165 (169)
T 3qrx_A 100 REEILKAFRLF-DDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRIMKK 165 (169)
T ss_dssp HHHHHHHHHHH-CTTCSSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCCSSSSCBCHHHHHHHHC-
T ss_pred HHHHHHHHHHh-CCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHh
Confidence 45778889888 5455578999999999999998877766666666777778899999999998765
No 74
>3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A 1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X* 3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A* 3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ...
Probab=93.73 E-value=0.38 Score=35.44 Aligned_cols=68 Identities=15% Similarity=0.208 Sum_probs=54.2
Q ss_pred HHHHHHHHHhcCCCC-CCccCHHHHHHHHHH-----cCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHhC
Q psy9055 62 KKLESLYSKYKDASE-PDKILVEGIMKFLDD-----LSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLELG 129 (284)
Q Consensus 62 ~~l~~lFd~Y~d~~~-~~~I~~dG~~~~~ed-----Lgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~ 129 (284)
..|..+|.+|-+.++ .+.|+.+-+.+++.. ||..+....+--+...+....-|.|+-+||+..+..+.
T Consensus 9 ~~l~~~F~~~D~~dG~~g~Is~~EL~~~l~~~~~~~lg~~~~~~~v~~~~~~~D~d~dG~I~f~EF~~~~~~l~ 82 (92)
T 3rm1_A 9 VALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSNGDGECDFQEFMAFVAMIT 82 (92)
T ss_dssp HHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCTTTSCCCCSHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCCCCcCeECHHHHHHHHHHHhhhhccCcccHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHHH
Confidence 567889999984322 359999999999999 99887776666666667777889999999999988753
No 75
>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A
Probab=93.69 E-value=0.17 Score=38.79 Aligned_cols=65 Identities=11% Similarity=0.106 Sum_probs=50.8
Q ss_pred cHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHH
Q psy9055 60 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML 126 (284)
Q Consensus 60 ~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~ 126 (284)
....+..+|..| |.+..+.|+.+-+.+++..+|..+.+-.+-.+...+. ..-|.|+.+||++-++
T Consensus 82 ~~~~~~~~F~~~-D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d-~~dg~i~~~eF~~~l~ 146 (147)
T 4ds7_A 82 SEQELLEAFKVF-DKNGDGLISAAELKHVLTSIGEKLTDAEVDEMLREVS-DGSGEINIKQFAALLS 146 (147)
T ss_dssp HHHHHHHHHHHH-CTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHS-SSCSSEEHHHHHHHTT
T ss_pred cHHHHHHHHHHh-CCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHHHhc-CCCCcCcHHHHHHHHh
Confidence 346788889888 4445578999999999999998877766655556666 7789999999998654
No 76
>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A
Probab=93.65 E-value=0.22 Score=36.86 Aligned_cols=67 Identities=10% Similarity=0.105 Sum_probs=53.2
Q ss_pred cHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHc---CCCCCchHHHHHHHhhcccccccccHHHHHHHHHH
Q psy9055 60 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDL---SLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE 127 (284)
Q Consensus 60 ~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edL---gv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~ 127 (284)
....+..+|..| |.+..+.|+.+-+.+++..+ |..+.+..+-.+...+....-|.|+.+||+..+..
T Consensus 39 ~~~~l~~~F~~~-D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~ 108 (109)
T 1rwy_A 39 SADDVKKVFHIL-DKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEFSTLVAE 108 (109)
T ss_dssp CHHHHHHHHHHH-STTCSSEECHHHHHTHHHHHCTTCCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHT
T ss_pred hHHHHHHHHHHH-CCCCCCeEcHHHHHHHHHHHhccCCCCCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHc
Confidence 457899999998 44455789999999999999 77777666555555666677899999999988764
No 77
>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5
Probab=93.63 E-value=1.2 Score=36.68 Aligned_cols=73 Identities=11% Similarity=0.200 Sum_probs=57.6
Q ss_pred cccHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHhCC
Q psy9055 58 SVDRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLELGC 130 (284)
Q Consensus 58 ~~~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~ 130 (284)
....+.+.++|..|-..+..+.|+.+-+.+++..+|..+....+-.+...+....-|.|+.+||+..+..++.
T Consensus 18 ~~~~~el~~~f~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~Ef~~~~~~~~~ 90 (204)
T 1jba_A 18 AADAAQLQEWYKKFLEECPSGTLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLR 90 (204)
T ss_dssp HHHHHHHHHHHHHHHSSSTTCCEEHHHHHHHHHCCSSSTTHHHHHHHHHHHCCSSSSEECHHHHHHHHHHHSS
T ss_pred CCCHHHHHHHHHHHHhhCCCCCcCHHHHHHHHHHhcCCCcHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHHcc
Confidence 3466889999999864313478999999999999999665555555666677777899999999999988754
No 78
>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A
Probab=93.62 E-value=0.18 Score=38.79 Aligned_cols=123 Identities=12% Similarity=0.149 Sum_probs=78.7
Q ss_pred CCCcchHHHHH-HHHhh----hC-CCHHHHHHHHHhCCCChHHH-HHhhc----CCCccc---------hhcc--CC---
Q psy9055 3 KLKSSQKDKVK-RFISF----TQ-TGELTAINCLSQNDWKLDLA-SDNYF----QNPSAY---------YKEQ--KS--- 57 (284)
Q Consensus 3 ~l~~~~~~~i~-qF~~i----T~-~s~~~A~~~L~~~~w~l~~A-~~~fy----~~~~~~---------~~~~--~~--- 57 (284)
.+++.+.+.+. -|..+ .| .+...-..+|...+..+... +...+ .+..+. .... ..
T Consensus 4 ~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~ 83 (153)
T 3ox6_A 4 SLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVELMGPKLLAETAD 83 (153)
T ss_dssp CCCHHHHHHHHHHHHHHHHHCSSSCCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTTSTTCCCHHHHHHHHHHHHTTCCHH
T ss_pred cCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCccCcHHHHHHHHHHHhhccccc
Confidence 45566555554 34443 23 36677777787776655432 22222 222211 0000 00
Q ss_pred cccHHHHHHHHHHhcCCCCCCccCHHHHHHHHHH-cCCCCCchHHHHHHHhhcccccccccHHHHHHHHH
Q psy9055 58 SVDRKKLESLYSKYKDASEPDKILVEGIMKFLDD-LSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML 126 (284)
Q Consensus 58 ~~~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~ed-Lgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~ 126 (284)
......+..+|..| |.+..+.|+.+-+.+++.. +|..+.+..+-.+...+....-|.|+.+||+..++
T Consensus 84 ~~~~~~~~~~F~~~-D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~ 152 (153)
T 3ox6_A 84 MIGVKELRDAFREF-DTNGDGEISTSELREAMRALLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMMS 152 (153)
T ss_dssp HHCHHHHHHHHHHH-CTTCSSSBCHHHHHHHHHHHHSSCCCHHHHHHHHHHHCSSSSSSBCHHHHHHHTC
T ss_pred cccHHHHHHHHHHh-CCCCCCcCcHHHHHHHHHHHhcCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHh
Confidence 11246788899998 4445579999999999999 89988877776677777777889999999998664
No 79
>2ekk_A UBA domain from E3 ubiquitin-protein ligase HUWE1; ubiquitin associated domain, compact three helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=93.60 E-value=0.12 Score=34.40 Aligned_cols=39 Identities=10% Similarity=0.334 Sum_probs=34.4
Q ss_pred hHHHHHHHHhhhCCCHHHHHHHHHhCCCChHHHHHhhcCCC
Q psy9055 8 QKDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQNP 48 (284)
Q Consensus 8 ~~~~i~qF~~iT~~s~~~A~~~L~~~~w~l~~A~~~fy~~~ 48 (284)
..+.|++.+++ |-+++.|++.|..++ |++.|++-.+.+|
T Consensus 9 ~~~~v~~L~~M-GF~~~~a~~AL~~~~-n~e~A~~~L~~h~ 47 (47)
T 2ekk_A 9 NQQQLQQLMDM-GFTREHAMEALLNTS-TMEQATEYLLTHP 47 (47)
T ss_dssp CHHHHHHHHHH-HCCHHHHHHHHHHSC-SHHHHHHHHHTCC
T ss_pred CHHHHHHHHHc-CCCHHHHHHHHHHcC-CHHHHHHHHHcCC
Confidence 46789999995 999999999999998 9999999887664
No 80
>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ...
Probab=93.58 E-value=0.27 Score=38.37 Aligned_cols=66 Identities=12% Similarity=0.178 Sum_probs=54.1
Q ss_pred HHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHH
Q psy9055 61 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE 127 (284)
Q Consensus 61 ~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~ 127 (284)
.+.+..+|..| |.+..+.|+.+-+...+..+|..|....+-.+...+....-|.|+.+||+..+..
T Consensus 9 ~~~l~~~F~~~-D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~ 74 (148)
T 1exr_A 9 IAEFKEAFALF-DKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMAR 74 (148)
T ss_dssp HHHHHHHHHHH-CTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHH-CCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHh
Confidence 35678888887 4445578999999999999999998877766666777777899999999998765
No 81
>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A
Probab=93.54 E-value=1.2 Score=35.49 Aligned_cols=66 Identities=8% Similarity=0.130 Sum_probs=51.7
Q ss_pred HHHHHHHHHHhcCCCCCCccCHHHHHHHHHHc-C-------CCCCchHHHHHHHhhcccccccccHHHHHHHHHHh
Q psy9055 61 RKKLESLYSKYKDASEPDKILVEGIMKFLDDL-S-------LSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 61 ~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edL-g-------v~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 128 (284)
.+++.++|..+- +..+.|+.+-+.+.+..+ | ..+....+-.+...+....-|.|+.+||+..+..+
T Consensus 3 ~~~l~~~F~~~D--d~~G~i~~~el~~~l~~~~g~~~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~ 76 (173)
T 1alv_A 3 VRQFRRLFAQLA--GDDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNNI 76 (173)
T ss_dssp HHHHHHHHHHHH--GGGTSBCHHHHHHHHHHHHHTCSTTCCSCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred hhHHHHHHHHHh--CCCCCcCHHHHHHHHHHhhhcccccccCCCCHHHHHHHHHHHcCCCCCccCHHHHHHHHHHH
Confidence 357889999995 445789999999999998 7 55555455556666777778999999999998863
No 82
>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana}
Probab=93.50 E-value=0.23 Score=38.97 Aligned_cols=68 Identities=15% Similarity=0.068 Sum_probs=54.4
Q ss_pred HHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCC-CCCchHHHHHHHhhcccccccccHHHHHHHHHHhC
Q psy9055 61 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSL-SPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLELG 129 (284)
Q Consensus 61 ~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv-~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~ 129 (284)
...+..+|..| |.+..+.|+.+-+.+.+..+|+ .+.+-.+-.+...+....-|.|+.+||+..+..+.
T Consensus 39 ~~~l~~~F~~~-D~d~~G~I~~~el~~~l~~~g~~~~~~~e~~~~~~~~D~d~dG~I~~~EF~~~~~~~~ 107 (135)
T 3h4s_E 39 VSELCKGFSLL-ADPERHLITAESLRRNSGILGIEGMSKEDAQGMVREGDLDGDGALNQTEFCVLMVRLS 107 (135)
T ss_dssp HHHHHHHHHHH-SBTTTTBBCHHHHHHHGGGGTCCCCCHHHHHHHHHHHCSSCSSSBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-CCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhC
Confidence 46788899998 4445589999999999999997 76665555555566667789999999999998863
No 83
>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana}
Probab=93.50 E-value=0.29 Score=38.60 Aligned_cols=66 Identities=14% Similarity=0.173 Sum_probs=54.8
Q ss_pred HHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHH
Q psy9055 61 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE 127 (284)
Q Consensus 61 ~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~ 127 (284)
...+.++|..|- .+..+.|+.+-+..++..+|..+....+-.+...+....-|.|+.+||+..+..
T Consensus 26 ~~~l~~~F~~~D-~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~ 91 (166)
T 2aao_A 26 IAGLKEMFNMID-ADKSGQITFEELKAGLKRVGANLKESEILDLMQAADVDNSGTIDYKEFIAATLH 91 (166)
T ss_dssp HHHHHHHHHHHC-TTCCSSBCHHHHHHHGGGGTCCCCHHHHHHHHHHHCTTCCSSBCHHHHHHHHTT
T ss_pred HHHHHHHHHHhC-CCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHH
Confidence 456888899884 345578999999999999999998777777777777788899999999988754
No 84
>1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A
Probab=93.46 E-value=0.22 Score=36.91 Aligned_cols=67 Identities=13% Similarity=0.094 Sum_probs=53.0
Q ss_pred cHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHc---CCCCCchHHHHHHHhhcccccccccHHHHHHHHHH
Q psy9055 60 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDL---SLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE 127 (284)
Q Consensus 60 ~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edL---gv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~ 127 (284)
....+..+|..| |.+..+.|+.+-+.+++..+ |..+.+..+-.+...+....-|.|+.+||+..+++
T Consensus 40 ~~~~l~~~F~~~-D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 109 (110)
T 1pva_A 40 SANDVKKVFKAI-DADASGFIEEEELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIGIDEFETLVHE 109 (110)
T ss_dssp CHHHHHHHHHHH-CTTCSSSBCHHHHHTGGGGTCTTCCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHC
T ss_pred hHHHHHHHHHHh-CCCCCCcCcHHHHHHHHHHHhhcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHh
Confidence 457899999998 44455789999999999999 77776666555666666677899999999987764
No 85
>2ovk_C Myosin catalytic light chain LC-1, mantle muscle, myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, contractIle protein; 2.60A {Todarodes pacificus} PDB: 2ekv_C 2ekw_C 2oy6_C* 3i5f_C* 3i5g_C 3i5h_C 3i5i_C
Probab=93.36 E-value=0.35 Score=37.97 Aligned_cols=68 Identities=10% Similarity=0.092 Sum_probs=55.0
Q ss_pred cHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHH--hhcccccccccHHHHHHHHHHh
Q psy9055 60 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAW--RFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 60 ~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~--~l~a~~~g~~tr~eF~~g~~~l 128 (284)
....+...|..| |.+..+.|+.+-+.+++..+|..+.+-.+-.+.. .+....-|.|+.+||++.+..-
T Consensus 83 ~~~~l~~~F~~~-D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~ 152 (159)
T 2ovk_C 83 AADEFMEAFKTF-DREGQGLISSAEIRNVLKMLGERITEDQCNDIFTFCDIREDIDGNIKYEDLMKKVMAG 152 (159)
T ss_dssp CHHHHHHHHHHT-CTTSSSEECHHHHHHHHHHSSSCCCHHHHHHHHHHTTCCCCTTCCEEHHHHHHHHHHC
T ss_pred cHHHHHHHHHHH-CCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhcCCCCCCCcEeHHHHHHHHhcC
Confidence 567888899998 5455578999999999999998877666655666 5667778999999999988763
No 86
>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A
Probab=93.31 E-value=0.21 Score=39.03 Aligned_cols=66 Identities=12% Similarity=0.269 Sum_probs=54.4
Q ss_pred HHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHH
Q psy9055 61 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE 127 (284)
Q Consensus 61 ~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~ 127 (284)
.+.+.++|..| |.+..+.|+.+-+...+..+|.+|....+--+...+....-|.|+.+||+..|..
T Consensus 5 ~~~l~~~F~~~-D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~ 70 (143)
T 2obh_A 5 KQEIREAFDLF-DADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQ 70 (143)
T ss_dssp HHHHHHHHHTT-CTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHTTTCCSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHh-CCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeeeHHHHHHHHHH
Confidence 46788899988 4445578999999999999999998877766666777777899999999998765
No 87
>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A
Probab=93.28 E-value=0.27 Score=40.72 Aligned_cols=67 Identities=19% Similarity=0.176 Sum_probs=53.6
Q ss_pred cHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHh
Q psy9055 60 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 60 ~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 128 (284)
..+.+.++|..| |.+..+.|+.+-+.+.+..+|+.+. ..+-.+...+....-|.|+.+||+..+...
T Consensus 50 ~~~~l~~~F~~~-D~d~~G~i~~~El~~~l~~~g~~~~-~~~~~l~~~~D~d~~g~i~~~EF~~~~~~~ 116 (191)
T 3k21_A 50 DVEKLKSTFLVL-DEDGKGYITKEQLKKGLEKDGLKLP-YNFDLLLDQIDSDGSGKIDYTEFIAAALDR 116 (191)
T ss_dssp HHHHHHHHHHHH-CTTCSSEECHHHHHHHHHHTTCCCC-TTHHHHHHHHCTTCSSSEEHHHHHHHHSCG
T ss_pred HHHHHHHHHHHH-CCCCCCCCcHHHHHHHHHHcCCCcH-HHHHHHHHHhCCCCCCeEeHHHHHHHHHhh
Confidence 346788899999 4445579999999999999999987 555556666677778999999999987543
No 88
>1wgn_A UBAP1, ubiquitin associated protein; ubiquitin associated protein 1 (UBAP1), UBA domain, structural genomics; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=93.19 E-value=0.062 Score=38.43 Aligned_cols=46 Identities=11% Similarity=0.205 Sum_probs=40.6
Q ss_pred CCCcchHHHHHHHHhhhCCCHHHHHHHHHhCCCChHHHHHhhcCCCc
Q psy9055 3 KLKSSQKDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQNPS 49 (284)
Q Consensus 3 ~l~~~~~~~i~qF~~iT~~s~~~A~~~L~~~~w~l~~A~~~fy~~~~ 49 (284)
.|++++.+.|...+++ |-++++|+.-|++.+.|+|.|++=-|.++.
T Consensus 14 ~ls~se~e~V~~LvsM-GFs~~qA~kALKat~~NvErAaDWLFSH~D 59 (63)
T 1wgn_A 14 MLSPSERQCVETVVNM-GYSYECVLRAMKKKGENIEQILDYLFAHSG 59 (63)
T ss_dssp TCCHHHHHHHHHHHHH-HCCHHHHHHHHHHHCSCHHHHHHHHHHHSC
T ss_pred hhCcchHHHHHHHHHc-CCCHHHHHHHHHHcCCCHHHHHHHHHhCCC
Confidence 4788889999988854 799999999999999999999999997753
No 89
>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=93.16 E-value=0.24 Score=37.96 Aligned_cols=64 Identities=16% Similarity=0.212 Sum_probs=50.3
Q ss_pred HHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHh
Q psy9055 61 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 61 ~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 128 (284)
++.+.++|..| |.+..+.|+.+-+.+++..+|+.+....+-.+... ..-|.|+.+||+..+...
T Consensus 4 ~~el~~~F~~~-D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~---~~~g~i~~~eF~~~~~~~ 67 (145)
T 2bl0_B 4 ADQIQECFQIF-DKDNDGKVSIEELGSALRSLGKNPTNAELNTIKGQ---LNAKEFDLATFKTVYRKP 67 (145)
T ss_dssp HHHHHHHHHHH-CTTCSSCEEGGGHHHHHHHTTCCCCHHHHHHHHHH---HTSSEECHHHHHHHHTSC
T ss_pred HHHHHHHHHHh-CCCCcCccCHHHHHHHHHHhCCCCCHHHHHHHHHh---cCCCeEcHHHHHHHHHHH
Confidence 44599999999 44455789999999999999999876655444333 567999999999988764
No 90
>1k2h_A S100A1, S-100 protein, alpha chain; non-covalent homodimer, X-type four-helix bundle, metal binding protein; NMR {Rattus norvegicus} SCOP: a.39.1.2 PDB: 1zfs_A 2k2f_A 2kbm_A 2l0p_A 2jpt_A
Probab=93.03 E-value=0.33 Score=34.95 Aligned_cols=68 Identities=15% Similarity=0.180 Sum_probs=53.0
Q ss_pred HHHHHHHHHHhcCCCCCC-ccCHHHHHHHHHH-----cCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHh
Q psy9055 61 RKKLESLYSKYKDASEPD-KILVEGIMKFLDD-----LSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 61 ~~~l~~lFd~Y~d~~~~~-~I~~dG~~~~~ed-----Lgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 128 (284)
...+..+|..|-..+..+ .|+.+-+.+.+.. +|..+....+-.+...+....-|.|+.+||+..+..+
T Consensus 8 ~~~l~~~F~~~D~~d~~G~~I~~~el~~~l~~~~~~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~ 81 (93)
T 1k2h_A 8 METLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDGEVDFQEFVVLVAAL 81 (93)
T ss_dssp HHHHHHHHHHHHTTSSCCSSCCHHHHHHHHHHHTHHHHHCCCCHHHHHHHHHHHHHCTTSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccCCCcCccCHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 457888999994123346 8999999999998 9988876665555556666677999999999998875
No 91
>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A
Probab=93.02 E-value=0.74 Score=35.80 Aligned_cols=64 Identities=19% Similarity=0.210 Sum_probs=41.9
Q ss_pred HHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHH
Q psy9055 62 KKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML 126 (284)
Q Consensus 62 ~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~ 126 (284)
..+..+|..| |.+..+.|+.+-+.+++..+|..+.+-.+-.+...+....-|.|+.+||++.+.
T Consensus 91 ~~~~~~F~~~-D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~ 154 (158)
T 2jnf_A 91 QELREAFRLY-DKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEFMGVMT 154 (158)
T ss_dssp STHHHHHHHH-CSSSSSSEEHHHHHHHHHHHCTTCCHHHHHHHHHHHCSSCCSEECSHHHHHHTS
T ss_pred HHHHHHHHHh-CCCCCCeEcHHHHHHHHHHhCCcCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence 4566777776 333446677777777777777666655555555556566667777777776554
No 92
>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A
Probab=93.00 E-value=2.6 Score=33.01 Aligned_cols=66 Identities=12% Similarity=0.204 Sum_probs=49.8
Q ss_pred HHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcC----CCCCchH-HHH--------HHHhhcccccccccHHHHHHHHHH
Q psy9055 61 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLS----LSPESKL-VLI--------IAWRFKAAAQCEFSRDEFMNGMLE 127 (284)
Q Consensus 61 ~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLg----v~ped~~-~Lv--------La~~l~a~~~g~~tr~eF~~g~~~ 127 (284)
.+++.++|..+ |.+..+.|+.+-+.+.+..+| ++|.... +.- |...+. .-|.|+.+||+..+..
T Consensus 5 ~~~l~~~F~~~-D~d~~G~i~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~D--~~g~i~~~EF~~~~~~ 81 (174)
T 1q80_A 5 VQKMKTYFNRI-DFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFLTAVA--GGKGIDETTFINSMKE 81 (174)
T ss_dssp HHHHHHHHHHH-CTTCSSEESHHHHHHHHHHHHHHSSCCTTHHHHHHHHHHHHHHHTGGGTT--TTSCEEHHHHHHHHHH
T ss_pred HHHHHHHHHhc-CCCCCCcEeHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHhcC--CCCeEcHHHHHHHHHH
Confidence 46789999999 545557899999999999998 9988755 211 122233 5689999999998887
Q ss_pred hC
Q psy9055 128 LG 129 (284)
Q Consensus 128 l~ 129 (284)
+.
T Consensus 82 ~~ 83 (174)
T 1q80_A 82 MV 83 (174)
T ss_dssp HT
T ss_pred Hc
Confidence 53
No 93
>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=92.89 E-value=0.29 Score=37.45 Aligned_cols=67 Identities=12% Similarity=0.149 Sum_probs=52.2
Q ss_pred cHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHH
Q psy9055 60 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE 127 (284)
Q Consensus 60 ~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~ 127 (284)
....+..+|..| |.+..+.|+.+-+.+++..+|..+.+-.+-.+...+....-|.|+.+||+..+..
T Consensus 74 ~~~~l~~~F~~~-D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 140 (145)
T 2bl0_B 74 QSKEMLDAFRAL-DKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKEVSVSGDGAINYESFVDMLVT 140 (145)
T ss_dssp GHHHHHHHHHHH-CSSSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHTTCCCCTTSEEEHHHHHHHHHH
T ss_pred cHHHHHHHHHHh-CCCCCCeEcHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCcEeHHHHHHHHHh
Confidence 567888999988 4444578999999999999998776655555555666667799999999998875
No 94
>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4
Probab=92.88 E-value=0.22 Score=37.03 Aligned_cols=66 Identities=9% Similarity=0.039 Sum_probs=51.4
Q ss_pred cHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHc---CCCCCchHHHHHHHhhcccccccccHHHHHHHHH
Q psy9055 60 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDL---SLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML 126 (284)
Q Consensus 60 ~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edL---gv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~ 126 (284)
....+..+|..| |.+..+.|+.+-+.+++..+ |..+.+..+-.+...+....-|.|+.+||+..++
T Consensus 40 ~~~~l~~~F~~~-D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~ 108 (109)
T 1bu3_A 40 SADDIKKAFFVI-DQDKSGFIEEDELKLFLQVFSAGARALTDAETKAFLKAGDSDGDGAIGVDEWAALVK 108 (109)
T ss_dssp CHHHHHHHHHHH-CTTCSSSEEHHHHHTHHHHHSTTCCCCCHHHHHHHHHHHCTTCSSEECHHHHHHHHT
T ss_pred hHHHHHHHHHHH-CCCCCCcCcHHHHHHHHHHHcccCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence 457899999998 44555789999999999999 7777665555555566667779999999998664
No 95
>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A
Probab=92.85 E-value=0.5 Score=36.77 Aligned_cols=65 Identities=15% Similarity=0.220 Sum_probs=50.1
Q ss_pred HHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHH
Q psy9055 61 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML 126 (284)
Q Consensus 61 ~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~ 126 (284)
...+...|..| |.+..+.|+.+-+.+.+..+|..+.+..+--+...+....-|.|+.+||+..|.
T Consensus 78 ~~~l~~~F~~~-D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~I~~~eF~~~~~ 142 (143)
T 2obh_A 78 KEEILKAFKLF-DDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIMK 142 (143)
T ss_dssp HHHHHHHHHHH-CTTCSSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHC
T ss_pred HHHHHHHHHHh-CCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHc
Confidence 35678889888 555557899999999999999887666555555566666789999999998653
No 96
>1k8u_A S100A6, calcyclin, CACY; calcium regulatory protein, calcium free, signaling protein; HET: MSE; 1.15A {Homo sapiens} SCOP: a.39.1.2 PDB: 1k96_A 1k9k_A 1k9p_A 1a03_A 1cnp_A 1jwd_A 2cnp_A 2jtt_A
Probab=92.84 E-value=0.25 Score=35.28 Aligned_cols=68 Identities=9% Similarity=0.155 Sum_probs=52.8
Q ss_pred HHHHHHHHHhcCCCCCC-ccCHHHHHHHHHH---cCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHhC
Q psy9055 62 KKLESLYSKYKDASEPD-KILVEGIMKFLDD---LSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLELG 129 (284)
Q Consensus 62 ~~l~~lFd~Y~d~~~~~-~I~~dG~~~~~ed---Lgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~ 129 (284)
..+..+|..|-..+..+ .|+.+-+.+.+.. +|..+....+-.+...+....-|.|+.+||+..+..+.
T Consensus 10 ~~l~~~F~~~D~~d~~G~~i~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~~ 81 (90)
T 1k8u_A 10 GLLVAIFHKYSGREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKDQEVNFQEYVTFLGALA 81 (90)
T ss_dssp HHHHHHHHHHHTSSSCTTEEEHHHHHHHHHHHSCCGGGTTSHHHHHHHHHHHHTTTCEEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCCCCcCCHHHHHHHHHHhcccCCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHH
Confidence 57888999996223446 8999999999997 99877766655555566666789999999999887753
No 97
>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B*
Probab=92.79 E-value=2.1 Score=32.81 Aligned_cols=64 Identities=22% Similarity=0.309 Sum_probs=47.8
Q ss_pred HHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHhC
Q psy9055 61 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLELG 129 (284)
Q Consensus 61 ~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~ 129 (284)
.+.+.++|..+- .+..+.|+.+-+ +.+..+|.+|+ +-.+...+....-|.|+.+||+..+..+.
T Consensus 5 ~~~l~~~F~~~D-~d~~G~i~~~el-~~l~~~~~~~~---~~~~~~~~D~~~~g~i~~~ef~~~~~~~~ 68 (155)
T 3ll8_B 5 IKRLGKRFKKLD-LDNSGSLSVEEF-MSLPELQQNPL---VQRVIDIFDTDGNGEVDFKEFIEGVSQFS 68 (155)
T ss_dssp HHHHHHHHHHHC-TTCSSSBCHHHH-TTSGGGTTCTT---HHHHHHHHCTTCSSSBCHHHHHHHHGGGC
T ss_pred HHHHHHHHHHhC-cCCCCeEcHHHH-HHhhccccchH---HHHHHHHHCCCCCCcCcHHHHHHHHHHHc
Confidence 357888898883 344578999999 67788888873 33344556666779999999999987753
No 98
>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ...
Probab=92.77 E-value=0.33 Score=37.91 Aligned_cols=68 Identities=10% Similarity=0.074 Sum_probs=53.3
Q ss_pred ccHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHh--hcccccccccHHHHHHHHHH
Q psy9055 59 VDRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWR--FKAAAQCEFSRDEFMNGMLE 127 (284)
Q Consensus 59 ~~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~--l~a~~~g~~tr~eF~~g~~~ 127 (284)
.....+..+|..| |.+..+.|+.+-+.+++..+|..+..-.+-.+... +....-|.|+.+||+..+..
T Consensus 81 ~~~~~l~~~F~~~-D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~ 150 (156)
T 1wdc_C 81 GTFADYMEAFKTF-DREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVMA 150 (156)
T ss_dssp CCHHHHHHHHHTT-CSSSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHHHHTCCCCTTSEEEHHHHHHHHHH
T ss_pred ChHHHHHHHHHHh-CCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCCCcEeHHHHHHHHhc
Confidence 3457888999988 44455789999999999999987766555555555 66677899999999998876
No 99
>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A
Probab=92.66 E-value=0.44 Score=38.05 Aligned_cols=66 Identities=15% Similarity=0.335 Sum_probs=53.0
Q ss_pred HHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHh
Q psy9055 62 KKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 62 ~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 128 (284)
..+..+|..| |.+..+.|+.+-+.+++..+|..+....+-.+...+....-|.|+.+||+..+..+
T Consensus 74 ~~~~~~F~~~-D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~ 139 (172)
T 2znd_A 74 TDWQNVFRTY-DRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIVL 139 (172)
T ss_dssp HHHHHHHHHH-CTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHH-CCCCCCccCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 4677788888 44445789999999999999988777666666666777778999999999998874
No 100
>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus}
Probab=92.52 E-value=0.18 Score=38.72 Aligned_cols=105 Identities=8% Similarity=0.041 Sum_probs=73.1
Q ss_pred CHHHHHHHHHhCCCChH-HHHHhhcCCCccc---------hh-ccCCcccHHHHHHHHHHhcCCCCCCccCHHHHHHHHH
Q psy9055 22 GELTAINCLSQNDWKLD-LASDNYFQNPSAY---------YK-EQKSSVDRKKLESLYSKYKDASEPDKILVEGIMKFLD 90 (284)
Q Consensus 22 s~~~A~~~L~~~~w~l~-~A~~~fy~~~~~~---------~~-~~~~~~~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~e 90 (284)
+...-...|...+.++. ..+...+....+. .. ..........+..+|..| |.+..+.|+.+-+.+++.
T Consensus 25 ~~~el~~~l~~~g~~~~~~~~~~~~~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~-D~d~~G~I~~~El~~~l~ 103 (143)
T 3j04_B 25 DKEDLHDMLASMGKNPTDEYLEGMMSEAPGPINFTMFLTMFGEKLNGTDPEDVIRNAFACF-DEEASGFIHEDHLRELLT 103 (143)
T ss_dssp CHHHHHHHHHHTSCCCCHHHHHTTTTTSSSCCCHHHHHHHHHHTTTSSCCHHHHHHHHTTS-CSSSCCCCCTTTHHHHHH
T ss_pred CHHHHHHHHHHhCCCCCHHHHHHHHHhCCCCcCHHHHHHHHHHHhccCCcHHHHHHHHHHH-CCCCCCeEcHHHHHHHHH
Confidence 56677777777766543 3355555442211 01 112233567888999988 444557899999999999
Q ss_pred HcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHH
Q psy9055 91 DLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE 127 (284)
Q Consensus 91 dLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~ 127 (284)
.+|..+.+-.+-.+...+....-|.|+.+||++.++.
T Consensus 104 ~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~ 140 (143)
T 3j04_B 104 TMGDRFTDEEVDEMYREAPIDKKGNFNYVEFTRILKH 140 (143)
T ss_dssp TSSSCCCHHHHHHHHHHTTCCSSSCCCSTHHHHHHHS
T ss_pred HcCCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHhc
Confidence 9998887776666666777777899999999998865
No 101
>1wr1_B Ubiquitin-like protein DSK2; UBA domain, UBA-ubiquitin complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1
Probab=92.48 E-value=0.16 Score=35.76 Aligned_cols=39 Identities=8% Similarity=0.098 Sum_probs=33.2
Q ss_pred HHHHHHHHhhhCC-CHHHHHHHHHhCCCChHHHHHhhcCCC
Q psy9055 9 KDKVKRFISFTQT-GELTAINCLSQNDWKLDLASDNYFQNP 48 (284)
Q Consensus 9 ~~~i~qF~~iT~~-s~~~A~~~L~~~~w~l~~A~~~fy~~~ 48 (284)
.+.|++.+++ |- ++..+++.|++++||++.|++-.|..|
T Consensus 18 ~~qi~~L~~M-GF~d~~~~~~AL~~~~gnve~Ave~L~~~~ 57 (58)
T 1wr1_B 18 EHQLRQLNDM-GFFDFDRNVAALRRSGGSVQGALDSLLNGD 57 (58)
T ss_dssp HHHHHHHHHH-TCCCHHHHHHHHHHHTSCHHHHHHHHHHTC
T ss_pred HHHHHHHHHc-CCCcHHHHHHHHHHhCCCHHHHHHHHHhCC
Confidence 4578899987 76 567789999999999999999988764
No 102
>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A
Probab=92.46 E-value=0.3 Score=36.24 Aligned_cols=66 Identities=12% Similarity=0.115 Sum_probs=51.9
Q ss_pred cHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHc---CCCCCchHHHHHHHhhcccccccccHHHHHHHHH
Q psy9055 60 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDL---SLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML 126 (284)
Q Consensus 60 ~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edL---gv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~ 126 (284)
....+..+|..| |.+..+.|+.+-+.+.+..+ |..+.+..+-.+...+....-|.|+.+||+.-|+
T Consensus 40 ~~~~l~~~F~~~-D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~EF~~~~~ 108 (109)
T 3fs7_A 40 TPDQIKKVFGIL-DQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVEEFQSLVK 108 (109)
T ss_dssp CHHHHHHHHHHH-STTCSSSBCHHHHHTTGGGTCTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHT
T ss_pred cHHHHHHHHHHH-CCCCCCeEeHHHHHHHHHHHhcccccCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence 467899999999 44455789999999999999 7777666555555566666789999999998764
No 103
>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5
Probab=92.45 E-value=1.1 Score=33.99 Aligned_cols=63 Identities=13% Similarity=0.165 Sum_probs=49.2
Q ss_pred HHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHhC
Q psy9055 62 KKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLELG 129 (284)
Q Consensus 62 ~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~ 129 (284)
+.+.++|..|- .+..+.|+.+-+.+.+..+|+.|....+-.+.. ..-|.|+.+||+..+..+.
T Consensus 5 ~~l~~~F~~~D-~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~----~~~g~i~~~eF~~~~~~~~ 67 (140)
T 1ggw_A 5 SPYKQAFSLFD-RHGTGRIPKTSIGDLLRACGQNPTLAEITEIES----TLPAEVDMEQFLQVLNRPN 67 (140)
T ss_dssp TTTHHHHHHTC-SSSSSEECHHHHHHHHHHTSCCCCHHHHHHHHT----TSCSSEEHHHHHHHHCTTS
T ss_pred HHHHHHHHHHC-CCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHh----CCCCcCcHHHHHHHHHHHh
Confidence 56888999884 344578999999999999999987655443322 5679999999999887653
No 104
>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A
Probab=92.43 E-value=0.23 Score=40.03 Aligned_cols=68 Identities=15% Similarity=0.194 Sum_probs=53.0
Q ss_pred cHHHHHHHHHHhcCCCCCCccCHHHHH-----HHHHHcCCCCCch-----HHHHHHHhhcccccccccHHHHHHHHHHh
Q psy9055 60 DRKKLESLYSKYKDASEPDKILVEGIM-----KFLDDLSLSPESK-----LVLIIAWRFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 60 ~~~~l~~lFd~Y~d~~~~~~I~~dG~~-----~~~edLgv~ped~-----~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 128 (284)
..+++..+|..| |.+..+.|+.+-+. ..+..+|+.|... .+-.+...+....-|.|+.+||+..|..+
T Consensus 14 ~~~~l~~~F~~~-D~d~~G~i~~~El~~~~~~~~l~~~g~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EF~~~~~~~ 91 (191)
T 1uhk_A 14 WIGRHKHMFNFL-DVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFGGAGMKYGVETDWPAYIEGWKKL 91 (191)
T ss_dssp HHHHHHHHHHHH-CTTCCSEEEHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCCTTCEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHhhc-cCCCCCcCcHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHhCcCCCCcCcHHHHHHHHHHH
Confidence 346788999998 44555789999998 7899999998766 33334455666677999999999998874
No 105
>1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A
Probab=92.36 E-value=0.26 Score=36.47 Aligned_cols=66 Identities=9% Similarity=0.112 Sum_probs=51.2
Q ss_pred cHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHc---CCCCCchHHHHHHHhhcccccccccHHHHHHHHH
Q psy9055 60 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDL---SLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML 126 (284)
Q Consensus 60 ~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edL---gv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~ 126 (284)
....+..+|..| |.+..+.|+.+-+.+++..+ |..+.+..+-.+...+....-|.|+.+||+..++
T Consensus 39 ~~~~l~~~F~~~-D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~ 107 (108)
T 1rro_A 39 SASQVKDIFRFI-DNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADNDGDGKIGADEFQEMVH 107 (108)
T ss_dssp CHHHHHHHHHHH-CTTCSSEECTHHHHTGGGGTCTTSCCCCHHHHHHHHHHHCCSSSSSEEHHHHHHHHT
T ss_pred cHHHHHHHHHHh-CCCCCCcCCHHHHHHHHHHHhhccCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHc
Confidence 457899999999 44455789999999999999 6666665555555566667789999999998664
No 106
>1qls_A S100C protein, calgizzarin; metal-binding protein/inhibitor, S100 family, EF-hand protein, complex (ligand/annexin), ligand of annexin II; 2.3A {Sus scrofa} SCOP: a.39.1.2 PDB: 1nsh_A
Probab=92.34 E-value=0.4 Score=35.01 Aligned_cols=68 Identities=15% Similarity=0.238 Sum_probs=50.6
Q ss_pred HHHHHHHHHHhcCCCCCC-ccCHHHHHHHHH-HcC----CCCCchHHHHHHHhhcccccccccHHHHHHHHHHh
Q psy9055 61 RKKLESLYSKYKDASEPD-KILVEGIMKFLD-DLS----LSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 61 ~~~l~~lFd~Y~d~~~~~-~I~~dG~~~~~e-dLg----v~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 128 (284)
...+..+|..|-+.+..+ .|+.+-+.+++. .+| ..+....+--|...+....-|.|+.+||+..+..+
T Consensus 12 ~~~l~~~F~~~Dd~d~~G~~I~~~el~~~l~~~~~~~~~~~~~~~~~~~l~~~~D~~~dg~I~~~EF~~~~~~~ 85 (99)
T 1qls_A 12 IESLIAIFQKHAGRDGNNTKISKTEFLIFMNTELAAFTQNQKDPGVLDRMMKKLDLDSDGQLDFQEFLNLIGGL 85 (99)
T ss_dssp HHHHHHHHHHHHTTSSCTTCBCHHHHHHHHTTTSHHHHHHCCCTHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCcCeeCHHHHHHHHHHHcchhccccCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 357889999996345556 899999999998 454 55555444445556666678999999999988775
No 107
>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A*
Probab=92.30 E-value=0.33 Score=39.28 Aligned_cols=68 Identities=19% Similarity=0.235 Sum_probs=52.4
Q ss_pred cHHHHHHHHHHhcCCCCCCccCHHHHH-----HHHHHcCCCCCch-----HHHHHHHhhcccccccccHHHHHHHHHHh
Q psy9055 60 DRKKLESLYSKYKDASEPDKILVEGIM-----KFLDDLSLSPESK-----LVLIIAWRFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 60 ~~~~l~~lFd~Y~d~~~~~~I~~dG~~-----~~~edLgv~ped~-----~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 128 (284)
..+.+.++|..| |.+..+.|+.+-+. ..+..+|++|... .+-.+...+....-|.|+.+||+..+..+
T Consensus 18 ~~~~l~~~F~~~-D~d~~G~i~~~El~~~~~~~~l~~~g~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EF~~~~~~~ 95 (195)
T 1qv0_A 18 WIKRHKHMFDFL-DINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGMEYGKEIAFPQFLDGWKQL 95 (195)
T ss_dssp HHHHHHHHHHHH-CTTCSSCBCHHHHHHHHHHTHHHHTTCCHHHHHHHHHHHHHHHHHTTCCTTCCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHhHc-CCCCCCcCcHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHcCCCCCceEcHHHHHHHHHHH
Confidence 346788889988 44455789999998 7889999998765 23334455666778999999999988774
No 108
>2bwb_A Ubiquitin-like protein DSK2; UBA, signaling protein; 2.3A {Saccharomyces cerevisiae} SCOP: a.5.2.1 PDB: 2bwe_A
Probab=92.27 E-value=0.22 Score=33.22 Aligned_cols=37 Identities=8% Similarity=0.058 Sum_probs=31.3
Q ss_pred HHHHHHHHhhhCCC-HHHHHHHHHhCCCChHHHHHhhcC
Q psy9055 9 KDKVKRFISFTQTG-ELTAINCLSQNDWKLDLASDNYFQ 46 (284)
Q Consensus 9 ~~~i~qF~~iT~~s-~~~A~~~L~~~~w~l~~A~~~fy~ 46 (284)
.+.|++.+++ |-+ +..+++.|++++||++.|++-.|.
T Consensus 8 ~~~i~~L~~M-GF~d~~~~~~AL~~~~gnv~~Ave~L~~ 45 (46)
T 2bwb_A 8 EHQLRQLNDM-GFFDFDRNVAALRRSGGSVQGALDSLLN 45 (46)
T ss_dssp HHHHHHHHHT-TCCCHHHHHHHHHHHTTCHHHHHHHHHC
T ss_pred HHHHHHHHHc-CCCcHHHHHHHHHHhCCCHHHHHHHHHc
Confidence 4678899987 764 567899999999999999998774
No 109
>2cpw_A CBL-interacting protein STS-1 variant; ubiquitin associated domain, UBA, compact three helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=92.26 E-value=0.18 Score=35.95 Aligned_cols=38 Identities=16% Similarity=0.184 Sum_probs=34.7
Q ss_pred HHHHHHHhhhCCCHHHHHHHHHhCCC-ChHHHHHhhcCCC
Q psy9055 10 DKVKRFISFTQTGELTAINCLSQNDW-KLDLASDNYFQNP 48 (284)
Q Consensus 10 ~~i~qF~~iT~~s~~~A~~~L~~~~w-~l~~A~~~fy~~~ 48 (284)
+.|++.+++ |-++..|++.|..++| |++.|++-.|+.+
T Consensus 21 ~~i~~L~~M-GF~~~~a~~AL~~t~~~nve~A~ewL~~~~ 59 (64)
T 2cpw_A 21 SALDVLLSM-GFPRARAQKALASTGGRSVQTACDWLFSHS 59 (64)
T ss_dssp CHHHHHHHH-TCCHHHHHHHHHHTTTSCHHHHHHHHHSCC
T ss_pred HHHHHHHHc-CCCHHHHHHHHHHcCCCCHHHHHHHHHhCC
Confidence 578999995 9999999999999999 9999999998765
No 110
>1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6
Probab=92.25 E-value=0.23 Score=36.73 Aligned_cols=66 Identities=12% Similarity=-0.006 Sum_probs=49.5
Q ss_pred HHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHhC
Q psy9055 61 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLELG 129 (284)
Q Consensus 61 ~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~ 129 (284)
...+.+.|+.| |.+..+.|+.+-+..++..+|++.+++.- +-..+....-|.|+.+||+..|..+.
T Consensus 8 ~~~~~~~F~~~-D~d~dG~I~~~el~~~l~~~g~~~~~~~~--i~~~~D~d~dG~i~~~EF~~~~~~~~ 73 (92)
T 1fi6_A 8 RQYYVNQFKTI-QPDLNGFIPGSAAKEFFTKSKLPILELSH--IWELSDFDKDGALTLDEFCAAFHLVV 73 (92)
T ss_dssp HHHHHHHHTTT-CCSTTCEEEHHHHHHHHHHHSSCHHHHHH--HHHHHCTTCSSEEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-CCCCCCcCcHHHHHHHHHHcCCCHHHHHH--HHHHHCCCCCCCCCHHHHHHHHHHHH
Confidence 45678889888 44445789999999999999976544332 22344566679999999999998764
No 111
>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A
Probab=92.19 E-value=0.45 Score=38.05 Aligned_cols=67 Identities=13% Similarity=0.215 Sum_probs=54.1
Q ss_pred HHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHh
Q psy9055 61 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 61 ~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 128 (284)
...+..+|..| |.+..+.|+.+-+...+..+|..+.+..+-.+...+....-|.|+.+||+..+...
T Consensus 49 ~~~l~~~F~~~-D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~l~~~~D~d~dg~I~~~eF~~~~~~~ 115 (150)
T 2jjz_A 49 LTAFKEKYMEF-DLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYRDFVNMMLGK 115 (150)
T ss_dssp HHHHHHHHTTS-CCCTTSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTTSCSSBCHHHHHHHHHSS
T ss_pred HHHHHHHHHHh-CCCCcCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHHHh
Confidence 46788889888 44555789999999999999998877666555556666677999999999988764
No 112
>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C*
Probab=92.18 E-value=0.5 Score=36.13 Aligned_cols=66 Identities=8% Similarity=0.081 Sum_probs=50.3
Q ss_pred cHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHH
Q psy9055 60 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE 127 (284)
Q Consensus 60 ~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~ 127 (284)
....+..+|..| |.+..+.|+.+-+.+++..+|..+.+..+-.+... ....-|.|+.++|+.-+..
T Consensus 83 ~~~~~~~~F~~~-D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~-d~~~dg~i~~~eF~~~~~~ 148 (149)
T 2mys_C 83 TFEDFVEGLRVF-DKEGNGTVMGAELRHVLATLGEKMTEEEVEELMKG-QEDSNGCINYEAFVKHIMS 148 (149)
T ss_pred hHHHHHHHHHHh-CCCCCceEcHHHHHHHHHHhCCCCCHHHHHHHHhh-CCCCCCcEeHHHHHHHHhc
Confidence 456788889888 44455789999999999999987665554444444 6666799999999987754
No 113
>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A
Probab=92.17 E-value=0.27 Score=39.32 Aligned_cols=128 Identities=11% Similarity=0.103 Sum_probs=75.8
Q ss_pred CCCcchHHHHH-HHHhh----hC-CCHHHHHHHHHhCCCChHH-HHHhhc----CCCccch---------hc-cCCcccH
Q psy9055 3 KLKSSQKDKVK-RFISF----TQ-TGELTAINCLSQNDWKLDL-ASDNYF----QNPSAYY---------KE-QKSSVDR 61 (284)
Q Consensus 3 ~l~~~~~~~i~-qF~~i----T~-~s~~~A~~~L~~~~w~l~~-A~~~fy----~~~~~~~---------~~-~~~~~~~ 61 (284)
.++..+.+.++ -|..+ .| .+...-...|...+.++.. .+...| .+..+.. .. .......
T Consensus 4 ~l~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~EF~~~~~~~~~~~~~~ 83 (179)
T 2f2o_A 4 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSE 83 (179)
T ss_dssp --CCSHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHccCcccH
Confidence 35566655554 34333 22 3667777788877765432 233333 2222110 00 0111233
Q ss_pred HHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHhCCC
Q psy9055 62 KKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLELGCD 131 (284)
Q Consensus 62 ~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~~ 131 (284)
..+..+|..| |.+..+.|+.+-+.+++..+|..+.+-.+-.+...+....-|.|+.+||+..+...+..
T Consensus 84 ~~~~~~F~~~-D~d~~G~I~~~E~~~~l~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~~~~ 152 (179)
T 2f2o_A 84 EEIREAFRVF-DKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAKGGG 152 (179)
T ss_dssp HHHHHHHHHH-CTTCSSEECHHHHHHHHHHC--CCCHHHHHHHHHHHCTTCSSSEEHHHHHHHSCC----
T ss_pred HHHHHHHHHh-CCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHcCCC
Confidence 5678889888 44455789999999999999988776666556666777778999999999988876543
No 114
>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B
Probab=92.16 E-value=0.55 Score=37.08 Aligned_cols=68 Identities=6% Similarity=-0.062 Sum_probs=52.7
Q ss_pred cHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHh
Q psy9055 60 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 60 ~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 128 (284)
....+..+|..| |.+..+.|+.+-+.+++..+|....+-.+-.+...+....-|.|+.+||+..|...
T Consensus 93 ~~~~l~~~F~~~-D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~I~~~eF~~~~~~~ 160 (166)
T 2mys_B 93 PEDVIMGAFKVL-DPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWAAFPPDVAGNVDYKNICYVITHG 160 (166)
T ss_pred cHHHHHHHHHHh-CCCCCcceeHHHHHHHHHHcCCCCCHHHHHHHHHhcCCCCCCeEeHHHHHHHHHhc
Confidence 456788899988 44455789999999999999977665555455555666677999999999988763
No 115
>2ovk_B RLC, myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, contractIle protein; 2.60A {Todarodes pacificus} PDB: 2ekv_B 2ekw_B 2oy6_B* 3i5f_B* 3i5g_B 3i5h_B 3i5i_B
Probab=92.08 E-value=0.37 Score=37.54 Aligned_cols=66 Identities=9% Similarity=0.088 Sum_probs=53.2
Q ss_pred cHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHH
Q psy9055 60 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE 127 (284)
Q Consensus 60 ~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~ 127 (284)
....+..+|..| |.+..+.|+.+-+.+++..+|....+-.+-.+...+.. .-|.|+.+||++-+..
T Consensus 83 ~~~~l~~~F~~~-D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~-~dg~I~~~eF~~~~~~ 148 (153)
T 2ovk_B 83 PEDALRNAFSMF-DEDGQGFIPEDYLKDLLENMGDNFSKEEIKNVWKDAPL-KNKQFNYNKMVDIKGK 148 (153)
T ss_dssp CTTHHHHHHHTT-CSSCSSCCCHHHHHHHHHHSSSCCCHHHHHHHHHHCCE-ETTEECHHHHHHHHHC
T ss_pred hHHHHHHHHHHH-CCCCCCeEcHHHHHHHHHHcCCCCCHHHHHHHHHHcCC-CCCEEeHHHHHHHHhc
Confidence 346788999998 44455789999999999999988776666666666666 7899999999998875
No 116
>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A
Probab=92.05 E-value=0.24 Score=38.27 Aligned_cols=66 Identities=14% Similarity=0.197 Sum_probs=53.2
Q ss_pred cHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHH
Q psy9055 60 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML 126 (284)
Q Consensus 60 ~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~ 126 (284)
....+..+|..| |.+..+.|+.+-+.+++..+|..+.+..+-.+...+....-|.|+.+||+..+.
T Consensus 81 ~~~~~~~~F~~~-D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~d~dg~i~~~eF~~~~~ 146 (148)
T 1m45_A 81 KTEDFVKAFQVF-DKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIEDVL 146 (148)
T ss_dssp CTHHHHHHHHTT-CSSSSSEEEHHHHHHHHHHSTTCCCHHHHHHHHTTCCCCTTSEEEHHHHHHHHH
T ss_pred cHHHHHHHHHHh-CCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHh
Confidence 447788999988 444557899999999999999987766665566666667789999999998775
No 117
>2cp9_A EF-TS, EF-TSMT, elongation factor TS, mitochondrial; UBA, structural genomics, human, NPPSFA; NMR {Homo sapiens} SCOP: a.5.2.2
Probab=92.04 E-value=0.16 Score=36.50 Aligned_cols=36 Identities=14% Similarity=-0.014 Sum_probs=33.6
Q ss_pred HHHHHHHHhhhCCCHHHHHHHHHhCCCChHHHHHhh
Q psy9055 9 KDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNY 44 (284)
Q Consensus 9 ~~~i~qF~~iT~~s~~~A~~~L~~~~w~l~~A~~~f 44 (284)
.+.|.+..+.||++-..|..-|..++||++.|+.-.
T Consensus 10 ~~~Vk~LRe~TGag~~dcKkAL~e~~GDi~~Ai~~L 45 (64)
T 2cp9_A 10 KELLMKLRRKTGYSFVNCKKALETCGGDLKQAEIWL 45 (64)
T ss_dssp CHHHHHHHHHHCCCHHHHHHHHHHHTSCHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHcCCCHHHHHHHH
Confidence 467999999999999999999999999999999865
No 118
>1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6
Probab=92.01 E-value=0.26 Score=37.32 Aligned_cols=66 Identities=17% Similarity=0.156 Sum_probs=49.5
Q ss_pred HHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHhC
Q psy9055 61 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLELG 129 (284)
Q Consensus 61 ~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~ 129 (284)
...+.++|+.| |.+..+.|+.+-+.+++..+|++.+.+ --+-..+....-|.|+++||+..|..+.
T Consensus 10 ~~~~~~~F~~~-D~d~dG~Is~~el~~~l~~~~l~~~~l--~~i~~~~D~d~dG~i~~~EF~~~~~~~~ 75 (99)
T 1qjt_A 10 NPVYEKYYRQV-EAGNTGRVLALDAAAFLKKSGLPDLIL--GKIWDLADTDGKGVLSKQEFFVALRLVA 75 (99)
T ss_dssp CTHHHHHHHHH-CCTTSSCCCSHHHHHHHHTSSSCHHHH--HHHHHHHCCSSSSSCCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-CCCCCCcCCHHHHHHHHHHcCCCHHHH--HHHHHHHCCCCCCcCCHHHHHHHHHHHH
Confidence 35788999998 444557899999999999999763332 2233345566789999999999998753
No 119
>1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6
Probab=91.96 E-value=0.25 Score=36.73 Aligned_cols=67 Identities=10% Similarity=0.072 Sum_probs=50.1
Q ss_pred cHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHhC
Q psy9055 60 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLELG 129 (284)
Q Consensus 60 ~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~ 129 (284)
..+.+.+.|..|- .+..+.|+.+-+..++..+|++.+.+.- +-..+....-|.|+.+||+..|..+.
T Consensus 8 ~~~~~~~~F~~~D-~d~dG~I~~~el~~~l~~~g~~~~~~~~--i~~~~D~d~dG~i~~~EF~~~~~~~~ 74 (95)
T 1c07_A 8 EKAKYDEIFLKTD-KDMDGFVSGLEVREIFLKTGLPSTLLAH--IWSLCDTKDCGKLSKDQFALAFHLIS 74 (95)
T ss_dssp HHHHHHHHHHHHC-TTCSSEECHHHHHHHHHTTTCCHHHHHH--HHHHHCTTCSSSEETTTHHHHHHHHH
T ss_pred HHHHHHHHHHHhC-CCCCCcEeHHHHHHHHHHcCCCHHHHHH--HHHHHCCCCCCcCCHHHHHHHHHHHH
Confidence 4567889999994 3445789999999999999976444332 22344556679999999999998754
No 120
>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ...
Probab=91.73 E-value=0.9 Score=35.22 Aligned_cols=65 Identities=12% Similarity=0.156 Sum_probs=49.3
Q ss_pred HHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHH
Q psy9055 61 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML 126 (284)
Q Consensus 61 ~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~ 126 (284)
...+...|..| |.+..+.|+.+-+.+++..+|..+.+..+-.+...+....-|.|+.+||+..|.
T Consensus 82 ~~~l~~~F~~~-D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~d~dg~i~~~eF~~~~~ 146 (148)
T 1exr_A 82 EEELIEAFKVF-DRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRMMV 146 (148)
T ss_dssp HHHHHHHHHHH-STTCSSCBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSSSSSBCHHHHHHHHH
T ss_pred HHHHHHHHHHh-CCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHc
Confidence 35677788777 445557899999999999999877665555555566666679999999998764
No 121
>2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens}
Probab=91.73 E-value=0.52 Score=36.27 Aligned_cols=67 Identities=16% Similarity=0.142 Sum_probs=48.3
Q ss_pred cHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHhC
Q psy9055 60 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLELG 129 (284)
Q Consensus 60 ~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~ 129 (284)
..+.+.++|..| |.+..+.|+.+-+.+++...+++.+ .+--+...+....-|.|+.+||+..|..+.
T Consensus 12 ~~~~l~~~F~~~-D~d~dG~I~~~El~~~l~~~~~~~~--~~~~i~~~~D~d~dG~I~~~EF~~~~~~~~ 78 (111)
T 2kgr_A 12 SRLKYRQLFNSH-DKTMSGHLTGPQARTILMQSSLPQA--QLASIWNLSDIDQDGKLTAEEFILAMHLID 78 (111)
T ss_dssp HHHHHHHHHHTT-SCSSCCEEEHHHHHHHHHTTCCCHH--HHHHHHHHHCSSCCSEEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-CCCCCCcCcHHHHHHHHHhCCCCHH--HHHHHHHHHCCCCCCCCcHHHHHHHHHHHH
Confidence 356788899999 4444578999999999985444433 333333445566789999999999988754
No 122
>1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A
Probab=91.65 E-value=0.37 Score=38.50 Aligned_cols=67 Identities=15% Similarity=0.261 Sum_probs=53.9
Q ss_pred HHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHh
Q psy9055 61 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 61 ~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 128 (284)
...+..+|..| |.+..+.|+.+-+...+..+|..+.+..+-.+...+....-|.|+.+||+..+...
T Consensus 47 ~~~l~~~F~~~-D~d~dG~I~~~El~~~l~~~g~~~~~~~~~~l~~~~D~d~dg~I~~~eF~~~~~~~ 113 (147)
T 1wy9_A 47 LEAFKVKYMEF-DLNGNGDIDIMSLKRMLEKLGVPKTHLELKRLIREVSSGSEETFSYSDFLRMMLGK 113 (147)
T ss_dssp HHHHHHHHTTS-CCCTTSSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCTTEECHHHHHHHHCSS
T ss_pred HHHHHHHHHHH-CCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHh
Confidence 45678888888 54555789999999999999999887666666666777778999999999988653
No 123
>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens}
Probab=91.57 E-value=0.35 Score=39.82 Aligned_cols=70 Identities=20% Similarity=0.229 Sum_probs=53.7
Q ss_pred cHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHc-CCCCCchHHHHHHHh----hcccccccccHHHHHHHHHHhCC
Q psy9055 60 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDL-SLSPESKLVLIIAWR----FKAAAQCEFSRDEFMNGMLELGC 130 (284)
Q Consensus 60 ~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edL-gv~ped~~~LvLa~~----l~a~~~g~~tr~eF~~g~~~l~~ 130 (284)
....+..+|..| |.+..+.|+.+-+.+++..+ |..+.+..+-.+... +....-|.|+.+||+..+...++
T Consensus 112 ~~~~l~~~F~~~-D~d~dG~Is~~El~~~l~~~~g~~~~~~~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~~~~~ 186 (202)
T 2bec_A 112 RRNKLHYAFQLY-DLDRDGKISRHEMLQVLRLMVGVQVTEEQLENIADRTVQEADEDGDGAVSFVEFTKSLEKMDV 186 (202)
T ss_dssp HHHHHHHHHHHH-CTTCSSEECHHHHHHHHHHSCCSCCCHHHHHHHHHHHHHHHCSSCSSSEEHHHHHHTTTTSCH
T ss_pred HHHHHHHHHHHh-CCCCCCeEcHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHhCc
Confidence 456788999998 44455789999999999999 977665544334433 66677899999999999887653
No 124
>1cb1_A Calbindin D9K; calcium-binding protein; NMR {Sus scrofa} SCOP: a.39.1.1
Probab=91.56 E-value=0.51 Score=32.50 Aligned_cols=67 Identities=15% Similarity=0.228 Sum_probs=48.5
Q ss_pred cHHHHHHHHHHhcCCCCCC-ccCHHHHHHHHHH-cCCC---CCchHHHHHHHhhcccccccccHHHHHHHHHHh
Q psy9055 60 DRKKLESLYSKYKDASEPD-KILVEGIMKFLDD-LSLS---PESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 60 ~~~~l~~lFd~Y~d~~~~~-~I~~dG~~~~~ed-Lgv~---ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 128 (284)
....+..+|..|-..+..+ .|+.+-+.+++.. +|.. ++.+.. +...+....-|.|+.+||+..|..+
T Consensus 5 ~~~~l~~~F~~~D~~d~~G~~i~~~el~~~l~~~~g~~~~~~~~~~~--~~~~~D~~~dg~i~~~eF~~~~~~~ 76 (78)
T 1cb1_A 5 SPAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDD--LFQELDKNGDGEVSFEEFQVLVKKI 76 (78)
T ss_dssp CHHHHHHHHHHHHTTSSSTTEECHHHHHHHHHHHCSSCCSSCCCSSH--HHHHTCCCSSSSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCCCcCEeCHHHHHHHHHHHhhhhcccHHHHHH--HHHHhcCCCCCCCcHHHHHHHHHHh
Confidence 3568999999995413346 8999999999985 8854 333332 3334555667999999999988775
No 125
>2y5i_A S100Z, S100 calcium binding protein Z; metal-binding protein, EF-hand, calcium regulation, oligomer neuronal development, spine2; 2.03A {Danio rerio}
Probab=91.54 E-value=0.82 Score=34.42 Aligned_cols=68 Identities=18% Similarity=0.232 Sum_probs=51.9
Q ss_pred HHHHHHHHHHhcCCCCCC-ccCHHHHHHHHHH-----cCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHh
Q psy9055 61 RKKLESLYSKYKDASEPD-KILVEGIMKFLDD-----LSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 61 ~~~l~~lFd~Y~d~~~~~-~I~~dG~~~~~ed-----Lgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 128 (284)
...|.+.|..|-+.++.+ .|+.+-+...+.. ||..+....+--+...+....-|.|+-+||+..+..+
T Consensus 9 ~~~l~~~F~~fDd~dg~gG~I~~~El~~~l~~~~~~~lg~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~~ 82 (99)
T 2y5i_A 9 MDALITVFHNYSGSEGDKYKLSKGELKELLNAELTDFLMSQKDPMLVEKIMNDLDSNKDNEVDFNEFVVLVAAL 82 (99)
T ss_dssp HHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHSGGGGTTSCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCcCcCCHHHHHHHHHHHhhhhccccccHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHH
Confidence 357888999995333334 8999999999986 7777766555555556667778999999999998874
No 126
>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A
Probab=91.53 E-value=0.55 Score=37.70 Aligned_cols=62 Identities=11% Similarity=0.103 Sum_probs=50.7
Q ss_pred HHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHh
Q psy9055 66 SLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 66 ~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 128 (284)
.+|..| |.+..+.|+.+-+.+++..+|..+.+-.+-.+...+....-|.|+.+||+..+..+
T Consensus 113 ~~F~~~-D~d~~G~Is~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~i~~~eF~~~~~~~ 174 (191)
T 1uhk_A 113 ALFDIV-DKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDEMTRQHLGF 174 (191)
T ss_dssp HHHHHH-CTTCSSEECHHHHHHHHHHHTSCCSHHHHHHHHHHSCCCTTSCEEHHHHHHHHHHH
T ss_pred HHHHHh-cCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 788888 44455789999999999999988776666666666666678999999999999875
No 127
>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C
Probab=91.52 E-value=0.13 Score=40.04 Aligned_cols=68 Identities=13% Similarity=0.174 Sum_probs=52.4
Q ss_pred HHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhccc--ccccccHHHHHHHHHHhC
Q psy9055 61 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAA--AQCEFSRDEFMNGMLELG 129 (284)
Q Consensus 61 ~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~--~~g~~tr~eF~~g~~~l~ 129 (284)
.+.+.++|..|- .+..+.|+.+-+.+.+..+|+.|....+-.+...+... .-|.|+.+||+..+....
T Consensus 9 ~~~l~~~F~~~D-~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~~~~g~i~~~eF~~~~~~~~ 78 (151)
T 1w7j_B 9 LEEFKEAFELFD-RVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDFETFLPMLQAVA 78 (151)
T ss_dssp --CHHHHHHHHC-CSSSSEEESTTHHHHHHHTTCCCCHHHHHHHTTCCCHHHHTTCEEEHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHC-CCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCcCcCCCCcCcHHHHHHHHHHHh
Confidence 356888999884 33447899999999999999999876665555555555 679999999999988753
No 128
>1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5
Probab=91.52 E-value=0.12 Score=36.85 Aligned_cols=62 Identities=11% Similarity=0.100 Sum_probs=50.4
Q ss_pred HHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHH
Q psy9055 62 KKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNG 124 (284)
Q Consensus 62 ~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g 124 (284)
..+.++|..| |.+..+.|+.+-+.+.+..+|..+....+-.+...+....-|.|+.++|+..
T Consensus 23 ~~~~~~F~~~-D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~ 84 (87)
T 1s6j_A 23 GGLKELFKMI-DTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAA 84 (87)
T ss_dssp TTTTTHHHHH-CTTCSSCEEHHHHHHHHHTTTSSCCHHHHHHHHHHHCTTCSSEECHHHHTTC
T ss_pred HHHHHHHHHH-CCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHH
Confidence 4577889988 4445578999999999999999888776666666777777899999999864
No 129
>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A
Probab=91.51 E-value=0.31 Score=36.45 Aligned_cols=63 Identities=16% Similarity=0.219 Sum_probs=51.5
Q ss_pred HHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHH
Q psy9055 64 LESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE 127 (284)
Q Consensus 64 l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~ 127 (284)
+.++|..+- .+..+.|+.+-+.+++..+|..+....+-.+...+....-|.|+.+||+..+..
T Consensus 2 l~~~F~~~D-~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~ef~~~~~~ 64 (134)
T 1jfj_A 2 AEALFKEID-VNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGS 64 (134)
T ss_dssp HHHHHHHHC-TTCSSEEEHHHHHHHHHTTCCSSHHHHHHHHHHHHCSSCCSEEEHHHHHHHTTC
T ss_pred HHHHHHHHC-CCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHcCCCCCeEcHHHHHHHHHH
Confidence 567888884 344578999999999999998887777666777777788899999999998863
No 130
>2dai_A Ubadc1, ubiquitin associated domain containing 1; UBA domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=91.50 E-value=0.21 Score=37.59 Aligned_cols=40 Identities=13% Similarity=0.160 Sum_probs=35.9
Q ss_pred hHHHHHHHHhhhCCCHHHHHHHHHhCCCChHHHHHhhcCCC
Q psy9055 8 QKDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQNP 48 (284)
Q Consensus 8 ~~~~i~qF~~iT~~s~~~A~~~L~~~~w~l~~A~~~fy~~~ 48 (284)
..+.|++.+++ |-++..|++.|..++||++.|++-.|++.
T Consensus 29 ~e~~i~~L~~M-GF~~~~a~~AL~~t~~nve~A~ewL~~~~ 68 (83)
T 2dai_A 29 DEAALRQLTEM-GFPENRATKALQLNHMSVPQAMEWLIEHA 68 (83)
T ss_dssp CHHHHHHHHHH-TCCHHHHHHHHHHTTSCHHHHHHHHHHGG
T ss_pred CHHHHHHHHHc-CCCHHHHHHHHHHhCCCHHHHHHHHHHCC
Confidence 46789999995 99999999999999999999999888653
No 131
>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8
Probab=91.45 E-value=3.1 Score=32.80 Aligned_cols=60 Identities=12% Similarity=0.091 Sum_probs=46.2
Q ss_pred HHHhcCCCCCCccCHHHHHHHHHHcCC-----CCCchHHHHHHHhhcccccccccHHHHHHHHHHh
Q psy9055 68 YSKYKDASEPDKILVEGIMKFLDDLSL-----SPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 68 Fd~Y~d~~~~~~I~~dG~~~~~edLgv-----~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 128 (284)
|..+ |.+..+.|+.+-+.+.+..||+ .+....+-.+...+....-|.|+.+||+..+..+
T Consensus 7 F~~~-D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~ 71 (167)
T 1gjy_A 7 YFAS-VAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVL 71 (167)
T ss_dssp HHHH-HCCTTSCBCHHHHHHHHHHHTCSTTSCCCCHHHHHHHHHHHCTTCCSCBCHHHHHHHHHHH
T ss_pred HHHH-HcCCCCcCCHHHHHHHHHhhcccCCCCCcCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHH
Confidence 5555 4445578999999999999998 3454555556666777778999999999988774
No 132
>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A*
Probab=91.42 E-value=0.54 Score=37.98 Aligned_cols=63 Identities=11% Similarity=0.133 Sum_probs=49.6
Q ss_pred HHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHhC
Q psy9055 66 SLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLELG 129 (284)
Q Consensus 66 ~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~ 129 (284)
.+|..| |.+..+.|+.+-+.+++..+|..+.+-.+-.+...+....-|.|+.+||+..+..+.
T Consensus 117 ~~F~~~-D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~ 179 (195)
T 1qv0_A 117 AVFDIF-DKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAGDLDVDEMTRQHLGFW 179 (195)
T ss_dssp HHHHHT-C----CEECHHHHHHHHHHHSSCCCHHHHHHHHHHSCCCTTSCEEHHHHHHHHHHHH
T ss_pred HHHHHh-cCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHc
Confidence 788888 444557899999999999999887766666666666677789999999999998864
No 133
>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ...
Probab=91.42 E-value=0.23 Score=38.90 Aligned_cols=68 Identities=15% Similarity=0.155 Sum_probs=49.7
Q ss_pred cHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHh
Q psy9055 60 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 60 ~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 128 (284)
....+..+|..| |.+..+.|+.+-+.+++..+|..+.+-.+-.+...+....-|.|+.+||+..+..+
T Consensus 93 ~~~~~~~~F~~~-D~d~~G~i~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~ 160 (161)
T 1dtl_A 93 SEEELSDLFRMF-DKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKGV 160 (161)
T ss_dssp HHHHHHHHHHHH-CTTCSSEEEHHHHGGGGTTC--CCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHHC-
T ss_pred HHHHHHHHHHHh-CCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHcC
Confidence 456688888888 44445789999999999999977666555555566666778999999999888653
No 134
>2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A
Probab=91.33 E-value=1.2 Score=34.83 Aligned_cols=69 Identities=12% Similarity=0.126 Sum_probs=52.3
Q ss_pred cHHHHHHHHHHhcCCCCCC-ccCHHHHHHHHHH-----cCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHh
Q psy9055 60 DRKKLESLYSKYKDASEPD-KILVEGIMKFLDD-----LSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 60 ~~~~l~~lFd~Y~d~~~~~-~I~~dG~~~~~ed-----Lgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 128 (284)
....|..+|..|-+.+..+ .|+.+-+..++.. ||..+.+..+--+...+....-|.|+-+||+..+..+
T Consensus 20 ~~~~l~~aF~~fD~~dgdGG~Is~~EL~~~l~~~l~~~lg~~~t~~ev~~li~~~D~dgdG~Idf~EF~~~m~~~ 94 (113)
T 2lnk_A 20 ALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSCI 94 (113)
T ss_dssp HHHHHHHHHHHTTTTTSCTTCBCHHHHHHHHHHHCGGGGTTCCCTTHHHHHHHHHCSSSSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcccCCCCCEECHHHHHHHHHHHcchhcCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHH
Confidence 3457888999995233333 8999999999976 7777766555555566677778999999999988774
No 135
>3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A
Probab=91.24 E-value=0.87 Score=35.41 Aligned_cols=63 Identities=10% Similarity=0.098 Sum_probs=47.5
Q ss_pred HHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHh
Q psy9055 63 KLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 63 ~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 128 (284)
.+..+|..| |.+..+.|+.+-+.+++..+|++.+.+ -.+...+....-|.|+.+||+..+..+
T Consensus 99 ~~~~~F~~~-D~d~~G~i~~~E~~~~l~~~~~~~~~~--~~~~~~~D~d~dg~i~~~ef~~~~~~~ 161 (166)
T 3akb_A 99 FLHAALGVA-DTDGDGAVTVADTARALTAFGVPEDLA--RQAAAALDTDGDGKVGETEIVPAFARY 161 (166)
T ss_dssp HHHHHHHHH-CSSSSSCCBHHHHHHHHHHTTCCHHHH--HHHHHHHCTTCSSBCCHHHHHHHHHHH
T ss_pred HHHHHHHHh-CCCCCCcCCHHHHHHHHHHhCCCHHHH--HHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 488889877 444557899999999999999444333 333445566678999999999998764
No 136
>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5
Probab=91.13 E-value=0.38 Score=36.80 Aligned_cols=64 Identities=11% Similarity=0.087 Sum_probs=50.0
Q ss_pred HHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHH
Q psy9055 61 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML 126 (284)
Q Consensus 61 ~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~ 126 (284)
...+..+|..| |.+..+.|+.+-+.+++..+|..+.+..+-.+...+.. .-|.|+.+||++-+.
T Consensus 75 ~~~~~~~F~~~-D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~-~dg~i~~~eF~~~~~ 138 (140)
T 1ggw_A 75 PEEFVKGFQVF-DKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVPV-KDGMVNYHDFVQMIL 138 (140)
T ss_dssp HHHHHHHHHTT-CSSCSSCCCHHHHHHHHHHHHSCSCHHHHHHHHHHTTC-SSCCSTTTHHHHHHH
T ss_pred HHHHHHHHHHh-CCCCCCcEeHHHHHHHHHHcCCCCCHHHHHHHHHhccC-CCCcEeHHHHHHHHh
Confidence 47888899888 44455789999999999999987766555555556666 779999999998775
No 137
>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A
Probab=91.10 E-value=0.63 Score=39.56 Aligned_cols=64 Identities=9% Similarity=0.055 Sum_probs=35.9
Q ss_pred HHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHh
Q psy9055 63 KLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 63 ~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 128 (284)
.+..+|..| |.+..+.|+.+-+.+++..+|....+-.+-.+...+. ..-|.|+.+||++.+..+
T Consensus 118 ~l~~~F~~~-D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~l~~~~d-d~dg~I~~~eF~~~~~~l 181 (220)
T 3sjs_A 118 LAYNLFVMN-ARARSGTLEPHEILPALQQLGFYINQRTSLLLHRLFA-RGMAFCDLNCWIAICAFA 181 (220)
T ss_dssp HHHHHHHHH-CCSSTTEECHHHHHHHHHHHTCCCCHHHHHHHHHHHC---CCSEEHHHHHHHHHHH
T ss_pred HHHHHHHHH-CCCCCCCCcHHHHHHHHHHhCCCCCHHHHHHHHHHhc-CCCCcCcHHHHHHHHHHH
Confidence 455555555 3333456777777777776666655444444444444 445667777777666554
No 138
>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A
Probab=91.09 E-value=0.17 Score=39.18 Aligned_cols=65 Identities=11% Similarity=0.154 Sum_probs=50.3
Q ss_pred HHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhh-cccccccccHHHHHHHHHHh
Q psy9055 63 KLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRF-KAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 63 ~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l-~a~~~g~~tr~eF~~g~~~l 128 (284)
.+.++|..|- .+..+.|+.+-+.+++..+|+.|....+-.+...+ ....-|.|+.+||+..+...
T Consensus 5 ~l~~~F~~~D-~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~~D~~~~g~i~~~eF~~~~~~~ 70 (148)
T 1m45_A 5 ANKDIFTLFD-KKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQITGLIEVN 70 (148)
T ss_dssp CCTTCHHHHC-TTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHC--CC--CCEEEHHHHHHHHHHT
T ss_pred HHHHHHHHHC-CCCCCCCCHHHHHHHHHHhCCCCCHHHHHHHHHHhhCCCCCCeEcHHHHHHHHHHH
Confidence 3456788774 34457899999999999999999877766666677 67778999999999988875
No 139
>1vej_A Riken cDNA 4931431F19; UBA domain, three helix bundle, ubiquitin associated domain, structural genomics; NMR {Mus musculus} SCOP: a.5.2.1
Probab=91.08 E-value=0.44 Score=35.12 Aligned_cols=39 Identities=8% Similarity=0.144 Sum_probs=34.1
Q ss_pred HHHHHHHHhhhCC-CHHHHHHHHHhCCCChHHHHHhhcCCC
Q psy9055 9 KDKVKRFISFTQT-GELTAINCLSQNDWKLDLASDNYFQNP 48 (284)
Q Consensus 9 ~~~i~qF~~iT~~-s~~~A~~~L~~~~w~l~~A~~~fy~~~ 48 (284)
.+.|++.+++ |- ++..+++.|+.++||++.||+-.|..+
T Consensus 30 e~qi~qL~eM-GF~dr~~~~~AL~~t~Gnve~Ave~L~~~~ 69 (74)
T 1vej_A 30 QQELEELKAL-GFANRDANLQALVATDGDIHAAIEMLLGAS 69 (74)
T ss_dssp HHHHHHHHHH-TCCCHHHHHHHHHHTTSCHHHHHHHHHTCC
T ss_pred HHHHHHHHHc-CCCcHHHHHHHHHHhCCCHHHHHHHHHhCC
Confidence 5679999998 76 567889999999999999999999765
No 140
>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8
Probab=91.01 E-value=0.9 Score=37.26 Aligned_cols=66 Identities=9% Similarity=0.117 Sum_probs=51.5
Q ss_pred HHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHh
Q psy9055 62 KKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 62 ~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 128 (284)
..+..+|..| |.+..+.|+.+-+.+++..+|..+.+..+-.+...+....-|.|+.+||+..+..+
T Consensus 93 ~~~~~~F~~~-D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~ 158 (191)
T 1y1x_A 93 LSMREGFRKR-DSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFDRQRRGSLGFDDYVELSIFV 158 (191)
T ss_dssp HHHHHHHHHH-CTTSSSCBCHHHHHHHHHTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHh-CCCCCCeEcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHH
Confidence 4567778877 44445789999999999999988776666556666666678999999999998864
No 141
>1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A
Probab=91.01 E-value=1.6 Score=35.04 Aligned_cols=110 Identities=11% Similarity=0.026 Sum_probs=69.5
Q ss_pred hHHHHHHHHhhhCCCHHHHHHHHHhCC-----CCh-----HHHHHhhcCCCccchhccCCcccHHHHHHHHHHhcCCCCC
Q psy9055 8 QKDKVKRFISFTQTGELTAINCLSQND-----WKL-----DLASDNYFQNPSAYYKEQKSSVDRKKLESLYSKYKDASEP 77 (284)
Q Consensus 8 ~~~~i~qF~~iT~~s~~~A~~~L~~~~-----w~l-----~~A~~~fy~~~~~~~~~~~~~~~~~~l~~lFd~Y~d~~~~ 77 (284)
.++.++.+...|+.+++.-..+.+..+ ..| ..++..... .......+..+|..+- .+..
T Consensus 9 ~~~~l~~l~~~~~~~~~~i~~~~~~fd~~~~~G~i~~~e~~~~l~~~~~----------~~~~~~~~~~~f~~~D-~d~~ 77 (190)
T 1fpw_A 9 SKDDLTCLKQSTYFDRREIQQWHKGFLRDCPSGQLAREDFVKIYKQFFP----------FGSPEDFANHLFTVFD-KDNN 77 (190)
T ss_dssp TTHHHHHHTTTCCSTHHHHHHHHHHHHHHCTTCCEEHHHHHHHHHHHCT----------TSCCSHHHHHHHHTCC-SSCS
T ss_pred CHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCcCcHHHHHHHHHHHcC----------CCCcHHHHHHHHHHHC-CCCC
Confidence 456678888888888876555544321 111 111111110 0112356788888874 3445
Q ss_pred CccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHh
Q psy9055 78 DKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 78 ~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 128 (284)
+.|+.+-+..++..++..+..-.+-.+-..+-...-|.|+.+||+..+..+
T Consensus 78 G~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~ef~~~~~~~ 128 (190)
T 1fpw_A 78 GFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVASV 128 (190)
T ss_dssp SEECHHHHHHHHHHHSCCCSTHHHHHHHHHHCSSCSSEEEHHHHHHHHHHH
T ss_pred CcEeHHHHHHHHHHHccCCcHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHH
Confidence 789999999999998877655444444455666777999999999988873
No 142
>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus}
Probab=91.00 E-value=0.34 Score=37.12 Aligned_cols=63 Identities=13% Similarity=0.132 Sum_probs=48.3
Q ss_pred HHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHh
Q psy9055 61 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 61 ~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 128 (284)
.+.+.++|..| |.+..+.|+.+-+.+++..+|+.|....+-.+... .-|.|+.++|+..+...
T Consensus 6 ~~~l~~~F~~~-D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~----~~g~i~~~eF~~~~~~~ 68 (143)
T 3j04_B 6 IQEFKEAFNMI-DQNRDGFIDKEDLHDMLASMGKNPTDEYLEGMMSE----APGPINFTMFLTMFGEK 68 (143)
T ss_dssp HHHHHHHHTTT-CSSCTTCCCHHHHHHHHHHTSCCCCHHHHHTTTTT----SSSCCCHHHHHHHHHHT
T ss_pred HHHHHHHHHHh-CCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHh----CCCCcCHHHHHHHHHHH
Confidence 35677888888 44455799999999999999999876554333222 66899999999998864
No 143
>1xk4_A Calgranulin A; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1mr8_A
Probab=90.92 E-value=0.4 Score=35.05 Aligned_cols=65 Identities=11% Similarity=0.153 Sum_probs=48.1
Q ss_pred HHHHHHHHHhcCCCCCC-ccCHHHHHHHH-HHcCCC--CCchHHHHHHHhhcccccccccHHHHHHHHHHh
Q psy9055 62 KKLESLYSKYKDASEPD-KILVEGIMKFL-DDLSLS--PESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 62 ~~l~~lFd~Y~d~~~~~-~I~~dG~~~~~-edLgv~--ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 128 (284)
..|..+|..|-..+..+ .|+.+-+.+++ ..+|.. .+++. .+...+....-|.|+.+||+..|..+
T Consensus 10 ~~l~~~F~~~D~~d~dG~~I~~~El~~~l~~~~g~~~~~~~~~--~l~~~~D~d~dG~I~~~EF~~~~~~~ 78 (93)
T 1xk4_A 10 NSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRKKGAD--VWFKELDINTDGAVNFQEFLILVIKM 78 (93)
T ss_dssp HHHHHHHHHHHTSSSCTTCBCHHHHHHHHHHHSCHHHHTTCHH--HHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCCCcCeECHHHHHHHHHHHCcccCCHHHHH--HHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence 57888999995424446 89999999999 789844 34442 23344555667999999999998875
No 144
>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B
Probab=90.88 E-value=1.3 Score=34.73 Aligned_cols=63 Identities=5% Similarity=0.006 Sum_probs=48.1
Q ss_pred HHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCC-CCCchHHHHHHHhhcccccccccHHHHHHHHHHh
Q psy9055 61 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSL-SPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 61 ~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv-~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 128 (284)
...+..+|..|- .+..+.|+.+-+...+..+|+ .+....+-.+.... -|.|+.+||+..+...
T Consensus 24 ~~~l~~~F~~~D-~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~l~~~~----dg~i~~~eF~~~~~~~ 87 (166)
T 2mys_B 24 IEDFKEAFTVID-QNADGIIDKDDLRETFAAMGRLNVKNEELDAMIKEA----SGPINFTVFLTMFGEK 87 (166)
T ss_pred HHHHHHHHHHHC-CCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHHHC----CCCcCHHHHHHHHHHH
Confidence 456888898884 444578999999999999999 88765444333322 5999999999998864
No 145
>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ...
Probab=90.84 E-value=0.49 Score=36.90 Aligned_cols=68 Identities=10% Similarity=0.106 Sum_probs=54.0
Q ss_pred HHHHHHHHHHhcCC-CCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHhC
Q psy9055 61 RKKLESLYSKYKDA-SEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLELG 129 (284)
Q Consensus 61 ~~~l~~lFd~Y~d~-~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~ 129 (284)
.+.+.++|..|-.. +..+.|+.+-+.+.+..+|+.|....+-.| ..+....-|.|+.+||+..+....
T Consensus 8 ~~~l~~~F~~~D~~~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l-~~~D~~~~g~i~~~eF~~~~~~~~ 76 (156)
T 1wdc_C 8 IDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAV-GGTHKMGEKSLPFEEFLPAYEGLM 76 (156)
T ss_dssp HHHHHHHHHHHHHHTCSSSCEEGGGHHHHHHHTTCCCCHHHHHHT-TCCSSTTSCEECHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHccCCCCCCCCcHHHHHHHHHHcCCCCCHHHHHHH-HhhCCCCCCeeeHHHHHHHHHHHh
Confidence 45688889888430 344789999999999999999987666666 666666789999999999998763
No 146
>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ...
Probab=90.80 E-value=0.72 Score=35.96 Aligned_cols=104 Identities=10% Similarity=0.101 Sum_probs=68.8
Q ss_pred CHHHHHHHHHhCCCChH-HHHHhhcCCCccc---------hh-ccCCcccHHHHHHHHHHhcCCCCCCccCHHHHHHHHH
Q psy9055 22 GELTAINCLSQNDWKLD-LASDNYFQNPSAY---------YK-EQKSSVDRKKLESLYSKYKDASEPDKILVEGIMKFLD 90 (284)
Q Consensus 22 s~~~A~~~L~~~~w~l~-~A~~~fy~~~~~~---------~~-~~~~~~~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~e 90 (284)
+...-...|...+.++. ..+...+.+..+. .. ..........+..+|..| |.+..+.|+.+-+.+++.
T Consensus 36 ~~~el~~~l~~~g~~~~~~~~~~~~~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~-D~d~~G~I~~~el~~~l~ 114 (156)
T 1wdc_B 36 SKEDIKAISEQLGRAPDDKELTAMLKEAPGPLNFTMFLSIFSDKLSGTDSEETIRNAFAMF-DEQETKKLNIEYIKDLLE 114 (156)
T ss_dssp CHHHHHHHHHHHSSCCCHHHHHHHHTTSSSCCCHHHHHHHHHHHTCSCCCHHHHHHHHHTT-CTTCCSCEEHHHHHHHHH
T ss_pred cHHHHHHHHHHhCCCCCHHHHHHHHHhCCCcCcHHHHHHHHHHHhcCCChHHHHHHHHHHH-CcCCCCccCHHHHHHHHH
Confidence 55666666666554432 3455555443221 01 001223457788899988 444557899999999999
Q ss_pred HcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHH
Q psy9055 91 DLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE 127 (284)
Q Consensus 91 dLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~ 127 (284)
.+|..+.+-.+-.|.-.+... -|.|+.+||++.+..
T Consensus 115 ~~g~~~~~~~~~~~~~~~d~~-dg~i~~~eF~~~~~~ 150 (156)
T 1wdc_B 115 NMGDNFNKDEMRMTFKEAPVE-GGKFDYVKFTAMIKG 150 (156)
T ss_dssp HSSSCCCHHHHHHHHHHCCEE-TTEECHHHHHHHHHT
T ss_pred HhCCCCCHHHHHHHHHhcCCC-CCEEeHHHHHHHHhc
Confidence 999877666555555666666 899999999998876
No 147
>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=90.76 E-value=0.45 Score=36.38 Aligned_cols=64 Identities=14% Similarity=0.142 Sum_probs=40.6
Q ss_pred cHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHH
Q psy9055 60 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGM 125 (284)
Q Consensus 60 ~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~ 125 (284)
....+..+|..| |.+..+.|+.+-+.+++..+|..+.+..+-.+...+. ..-|.|+.+||++.|
T Consensus 77 ~~~~~~~~F~~~-D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d-~~dg~i~~~eF~~~~ 140 (142)
T 2bl0_C 77 SEDILRQAFRTF-DPEGTGYIPKAALQDALLNLGDRLKPHEFAEFLGITE-TEKGQIRYDNFINTM 140 (142)
T ss_dssp CHHHHHHHHHHT-CCSSCSCEEHHHHHHHHHHSSSCCCHHHHHHHHHHHC-CSSSEECSHHHHTTT
T ss_pred hHHHHHHHHHHH-CCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhC-CCCCcEeHHHHHHHH
Confidence 445677777776 3334466777777777777776655554444444555 566777777777543
No 148
>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens}
Probab=90.56 E-value=0.54 Score=38.39 Aligned_cols=67 Identities=10% Similarity=0.171 Sum_probs=52.8
Q ss_pred HHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHh
Q psy9055 61 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 61 ~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 128 (284)
...+.++|..+ |.+..+.|+.+-+.+.+..+|+.+....+-.+...+....-|.|+.+||+..+...
T Consensus 36 ~~~l~~~F~~~-D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~ef~~~~~~~ 102 (204)
T 3e3r_A 36 IQGLARFFRQL-DRDGSRSLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEFLRALRPP 102 (204)
T ss_dssp ----CHHHHHH-CTTCCSSBCHHHHHHHHHTTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHTSCC
T ss_pred HHHHHHHHHHH-ccCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHhh
Confidence 45788899988 44455789999999999999999988777777777777788999999999987653
No 149
>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe}
Probab=90.44 E-value=1.9 Score=34.59 Aligned_cols=109 Identities=11% Similarity=0.057 Sum_probs=64.4
Q ss_pred hHHHHHHHHhhhCCCHHHHHHHHHhC-----CCCh-----HHHHHhhcCCCccchhccCCcccHHHHHHHHHHhcCCCCC
Q psy9055 8 QKDKVKRFISFTQTGELTAINCLSQN-----DWKL-----DLASDNYFQNPSAYYKEQKSSVDRKKLESLYSKYKDASEP 77 (284)
Q Consensus 8 ~~~~i~qF~~iT~~s~~~A~~~L~~~-----~w~l-----~~A~~~fy~~~~~~~~~~~~~~~~~~l~~lFd~Y~d~~~~ 77 (284)
..+.+++++..++.+.....+..+.. +..| ..++..... .......+..+|..+- .+..
T Consensus 9 ~~~el~~~~~~~~~~~~el~~~f~~~D~~~~~G~i~~~e~~~~l~~~~~----------~~~~~~~~~~~f~~~D-~d~~ 77 (190)
T 2l2e_A 9 SQDQLQDLVRSTRFDKKELQQWYKGFFKDCPSGHLNKSEFQKIYKQFFP----------FGDPSAFAEYVFNVFD-ADKN 77 (190)
T ss_dssp CHHHHHHHHHHHCSCSHHHHHHHHHHHHHSCCCEECHHHHHHHHHHHCC----------CSCHHHHHHHHHHHHC-SSST
T ss_pred CHHHHHHHHHhcCCCHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCC----------CCCccHHHHHHHHHhc-CCCC
Confidence 34557777777777776655554432 1111 111111110 1123456777888774 3344
Q ss_pred CccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHH
Q psy9055 78 DKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE 127 (284)
Q Consensus 78 ~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~ 127 (284)
+.|+.+-+..++..++..+..-.+-.+-..+....-|.|+.+||...+..
T Consensus 78 G~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~~~~ 127 (190)
T 2l2e_A 78 GYIDFKEFICALSVTSRGELNDKLIWAFQLYDLDNNGLISYDEMLRIVDA 127 (190)
T ss_dssp TCEEHHHHHHHHTTSSCSCSHHHHHHHHHHHCTTSCSCBCHHHHHHHHHH
T ss_pred CeEeHHHHHHHHHHHcCCCHHHHHHHHHhHccCCCCCcCcHHHHHHHHHH
Confidence 67888888888888877655444433444555666788888888888776
No 150
>1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain, POB1 EH domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6
Probab=90.35 E-value=0.43 Score=36.92 Aligned_cols=67 Identities=12% Similarity=0.033 Sum_probs=52.4
Q ss_pred cHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHhC
Q psy9055 60 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLELG 129 (284)
Q Consensus 60 ~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~ 129 (284)
....+.+.|+.| |.+..+.|+.+-+...+..+|++.+.+.-++ ..+....-|.|+.+||+..|..+.
T Consensus 20 ~~~~~~~~F~~~-D~d~dG~Is~~el~~~l~~~gl~~~el~~i~--~~~D~d~dG~I~~~EF~~~m~~~~ 86 (110)
T 1iq3_A 20 QREYYVNQFRSL-QPDPSSFISGSVAKNFFTKSKLSIPELSYIW--ELSDADCDGALTLPEFCAAFHLIV 86 (110)
T ss_dssp SHHHHHHHHHHH-CCSSSSEEEHHHHHHHCCSSSCSSCCHHHHH--HHHCSSSCSEEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-CCCCCCeEcHHHHHHHHHHcCCCHHHHHHHH--HHHcCCCCCcCcHHHHHHHHHHHH
Confidence 567899999999 4444578999999999999998776654432 344556679999999999998764
No 151
>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia}
Probab=90.34 E-value=0.76 Score=37.94 Aligned_cols=64 Identities=9% Similarity=0.019 Sum_probs=51.2
Q ss_pred cHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHh
Q psy9055 60 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 60 ~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 128 (284)
....|..+|..| |.+..+.|+.+-+..++..||+.+....+-.|...+ -|.|+.++|+..+...
T Consensus 55 ~~~~l~~~F~~~-D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~l~~~~----~g~i~~~eF~~~~~~~ 118 (196)
T 3dtp_E 55 QVQEFKEAFQLI-DQDKDGFISKNDIRATFDSLGRLCTEQELDSMVAEA----PGPINFTMFLTIFGDR 118 (196)
T ss_dssp THHHHHHHHHHH-CCSCSSBCCHHHHHHHHHTTSCCCCHHHHHHHHTTS----SSCCBHHHHHHHHHHC
T ss_pred HHHHHHHHHHHH-CCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHc----cCCCcHHHHHHHHHHH
Confidence 346789999998 434457999999999999999999876655554444 7999999999998764
No 152
>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A
Probab=90.27 E-value=1.4 Score=34.81 Aligned_cols=64 Identities=8% Similarity=0.144 Sum_probs=47.4
Q ss_pred HHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHh
Q psy9055 62 KKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 62 ~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 128 (284)
..+..+|..| |.+..+.|+.+-+.+++..+|..+....+-.+...+ ..-|.|+.+||+..+..+
T Consensus 70 ~~~~~~F~~~-D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~~~~~ 133 (165)
T 1k94_A 70 NAWKENFMTV-DQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRY--SKNGRIFFDDYVACCVKL 133 (165)
T ss_dssp HHHHHHHHHH-CTTCCSBCCHHHHHHHHHHTTCCCCHHHHHHHHHHH--CBTTBCBHHHHHHHHHHH
T ss_pred HHHHHHHHHh-CCCCCceECHHHHHHHHHHhCCCCCHHHHHHHHHHh--CCCCeEcHHHHHHHHHHH
Confidence 5677788887 444557899999999999999876654433333333 567899999999988775
No 153
>2ovk_C Myosin catalytic light chain LC-1, mantle muscle, myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, contractIle protein; 2.60A {Todarodes pacificus} PDB: 2ekv_C 2ekw_C 2oy6_C* 3i5f_C* 3i5g_C 3i5h_C 3i5i_C
Probab=90.25 E-value=0.27 Score=38.62 Aligned_cols=67 Identities=10% Similarity=0.133 Sum_probs=52.0
Q ss_pred HHHHHHHHHHhc-CCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHh
Q psy9055 61 RKKLESLYSKYK-DASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 61 ~~~l~~lFd~Y~-d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 128 (284)
.+.+.++|..|- +.+..+.|+.+-+..++..||+.|....+-.+...+... -|.|+.+||+..+..+
T Consensus 8 ~~~l~~~F~~~D~~~d~~G~i~~~el~~~l~~lg~~~~~~~~~~l~~~~d~~-~g~i~~~eF~~~~~~~ 75 (159)
T 2ovk_C 8 IEEVREVFDLFDFWDGRDGDVDAAKVGDLLRCLGMNPTEAQVHQHGGTKKMG-EKAYKLEEILPIYEEM 75 (159)
T ss_dssp HHHHHHHHHHHHHHTTSSSEEEGGGHHHHHHHTTCCCCHHHHHHTTCCSSTT-SCEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCCCCCcHHHHHHHHHHcCCCCCHHHHHHHHHHhcCC-CCeEcHHHHHHHHHHH
Confidence 467888999983 133457899999999999999999877666555555444 3999999999988653
No 154
>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A
Probab=90.23 E-value=1.5 Score=35.98 Aligned_cols=70 Identities=9% Similarity=0.117 Sum_probs=49.4
Q ss_pred cHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCC-CCchHHHHHHHhhcccccccccHHHHHHHHHHhC
Q psy9055 60 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLS-PESKLVLIIAWRFKAAAQCEFSRDEFMNGMLELG 129 (284)
Q Consensus 60 ~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~-ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~ 129 (284)
....+..+|..|...+..+.|+.+-+..++..+|.. +....+-.+...+....-|.|+.+||+..+..++
T Consensus 31 ~~~~i~~~f~~~d~~~~~G~i~~~ef~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~Ef~~~~~~~~ 101 (207)
T 2d8n_A 31 SEEELCSWYQSFLKDCPTGRITQQQFQSIYAKFFPDTDPKAYAQHVFRSFDSNLDGTLDFKEYVIALHMTT 101 (207)
T ss_dssp CHHHHHHHHHHHHHHCTTSEEEHHHHHHHHHHTCTTSCCHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHHS
T ss_pred CHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHhccCCCcHHHHHHHHHHhcCCCCCeEeHHHHHHHHHHHc
Confidence 456778888777532123679999999999988876 3333444455566666778899999998888765
No 155
>2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A
Probab=90.21 E-value=0.54 Score=36.95 Aligned_cols=66 Identities=12% Similarity=0.190 Sum_probs=55.4
Q ss_pred HHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHh
Q psy9055 62 KKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 62 ~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 128 (284)
+.|.++|..| |.+..+.|+.+=+..++..+|.+|....+-.+...+.....|.++.++|+..+...
T Consensus 10 ~el~~~F~~~-D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~ 75 (148)
T 2lmt_A 10 AEFKDAFVQF-DKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNFTEFCGIMAKQ 75 (148)
T ss_dssp HHHHHHHHHH-HCSSCCEEEGGGHHHHHHHHTCCCCHHHHHHHHHHHHTTSTTEEEHHHHHHHHHHT
T ss_pred HHHHHHHHHH-cCCCCCeECHHHHHHHHHhcCCCchHHHHHHHHHhcccCCCCcccHHHHHHHHHHH
Confidence 5677889988 33445799999999999999999998887777777778888999999999988663
No 156
>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E
Probab=90.17 E-value=1.1 Score=35.78 Aligned_cols=69 Identities=9% Similarity=0.098 Sum_probs=45.3
Q ss_pred ccHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHh
Q psy9055 59 VDRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 59 ~~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 128 (284)
.....+..+|..+-. +..+.|+.+-+..++..++..+..-.+-.+-..+-...-|.|+.+||...+..+
T Consensus 53 ~~~~~~~~~f~~~D~-d~~g~i~~~Ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~~~~~ 121 (183)
T 1s6c_A 53 DASTYAHYLFNAFDT-TQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAI 121 (183)
T ss_dssp CCHHHHHHHHHHHCT-TCSSCEEHHHHHHHHHHHHHCCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHhCC-CCCCcEeHHHHHHHHHHHcCCCHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHH
Confidence 355677778877742 334678888888888777655443333333345555667888888888888775
No 157
>2cwb_A Chimera of immunoglobulin G binding protein G and ubiquitin-like protein SB132; helical bundle, protein binding; NMR {Streptococcus SP} PDB: 2den_A
Probab=90.07 E-value=0.33 Score=38.35 Aligned_cols=41 Identities=7% Similarity=0.155 Sum_probs=34.9
Q ss_pred HHHHHHHHhhhCCCHHHHHHHHHhCCCChHHHHHhhcCCCc
Q psy9055 9 KDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQNPS 49 (284)
Q Consensus 9 ~~~i~qF~~iT~~s~~~A~~~L~~~~w~l~~A~~~fy~~~~ 49 (284)
.+.|++.+++=-.++..+++.|.+++||++.||+..|+.|.
T Consensus 67 ~~qL~qL~eMGF~d~~~ni~AL~~t~Gdve~AVe~L~~~~~ 107 (108)
T 2cwb_A 67 QPQLQQLRDMGIQDDELSLRALQATGGDIQAALELIFAGGA 107 (108)
T ss_dssp HHHHHHHHTTTCCCHHHHHHHHHHHTSCHHHHHHHHHHTSC
T ss_pred HHHHHHHHHcCCCCHHHHHHHHHHhCCCHHHHHHHHHhcCC
Confidence 56788888865456789999999999999999999997753
No 158
>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A
Probab=90.03 E-value=6.7 Score=33.10 Aligned_cols=71 Identities=15% Similarity=0.269 Sum_probs=52.5
Q ss_pred ccHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHc-CCCCCchHHHHHHHhhcccccccccHHHHHHHHHHhC
Q psy9055 59 VDRKKLESLYSKYKDASEPDKILVEGIMKFLDDL-SLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLELG 129 (284)
Q Consensus 59 ~~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edL-gv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~ 129 (284)
.+++.+..++..|.+.+..+.|+.+-+.+++..+ +..+....+-.+...+....-|.|+.+||+.++..+.
T Consensus 61 ~s~~ei~~l~~~F~~~d~~G~Is~~ef~~~l~~~~~~~~~~~~~~~lf~~~D~d~~G~I~~~Ef~~~l~~~~ 132 (229)
T 3dd4_A 61 FTKKELQILYRGFKNECPSGVVNEETFKEIYSQFFPQGDSTTYAHFLFNAFDTDHNGAVSFEDFIKGLSILL 132 (229)
T ss_dssp HHHHHHHHHHHHHHTTCCSCCCCHHHHHHHHHHHSCSSSHHHHHHHHHHTTCSSCCSSCCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhhCCCCCcCHHHHHHHHHHHCCCCCcHHHHHHHHHHcCCCCCCeEeHHHHHHHHHHHc
Confidence 3566788888888754444789999999999885 3334444444566677777789999999999988753
No 159
>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A
Probab=90.00 E-value=2.5 Score=34.58 Aligned_cols=65 Identities=12% Similarity=0.095 Sum_probs=50.1
Q ss_pred HHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCC-----CCchHHHHHHHhhcccccccccHHHHHHHHHHh
Q psy9055 62 KKLESLYSKYKDASEPDKILVEGIMKFLDDLSLS-----PESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 62 ~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~-----ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 128 (284)
++|.+ |..+ |.+..+.|+.+-+.+.+..||++ +....+-.+...+....-|.|+.+||+..+..+
T Consensus 33 ~~l~~-F~~~-D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~eF~~~~~~~ 102 (198)
T 1juo_A 33 DPLYG-YFAA-VAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVL 102 (198)
T ss_dssp CTTHH-HHHH-HHTTTTEECHHHHHHHHHHHTTTCSSCCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHH
T ss_pred HHHHH-HHHH-hCCCCCcCCHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhCCCCCCeECHHHHHHHHHHH
Confidence 56777 8777 33455789999999999999983 454455556666777778999999999998874
No 160
>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A
Probab=89.99 E-value=2.5 Score=34.57 Aligned_cols=110 Identities=6% Similarity=0.085 Sum_probs=72.3
Q ss_pred hHHHHHHHHhhhCCCHHHHHHHHHhC-----CCCh-----HHHHHhhcCCCccchhccCCcccHHHHHHHHHHhcCCCCC
Q psy9055 8 QKDKVKRFISFTQTGELTAINCLSQN-----DWKL-----DLASDNYFQNPSAYYKEQKSSVDRKKLESLYSKYKDASEP 77 (284)
Q Consensus 8 ~~~~i~qF~~iT~~s~~~A~~~L~~~-----~w~l-----~~A~~~fy~~~~~~~~~~~~~~~~~~l~~lFd~Y~d~~~~ 77 (284)
..+.+.+++..+|.++.....+.+.. +..| ..++.... ........+..+|..+- .+..
T Consensus 17 ~~~el~~~~~~~~~~~~~i~~~f~~~d~~~~~G~i~~~ef~~~l~~~~----------~~~~~~~~~~~~f~~~D-~d~~ 85 (207)
T 2d8n_A 17 SKEILEELQLNTKFSEEELCSWYQSFLKDCPTGRITQQQFQSIYAKFF----------PDTDPKAYAQHVFRSFD-SNLD 85 (207)
T ss_dssp CHHHHHHHHHHSSCCHHHHHHHHHHHHHHCTTSEEEHHHHHHHHHHTC----------TTSCCHHHHHHHHHHHC-TTCC
T ss_pred CHHHHHHHHHHcCCCHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHhc----------cCCCcHHHHHHHHHHhc-CCCC
Confidence 34567888888888887666665532 1111 11111111 11134578899999884 3445
Q ss_pred CccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHh
Q psy9055 78 DKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 78 ~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 128 (284)
+.|+.+-+..++..++..+..-.+-.+-..+-...-|.|+++||+..+..+
T Consensus 86 G~i~~~Ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~I~~~E~~~~l~~~ 136 (207)
T 2d8n_A 86 GTLDFKEYVIALHMTTAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVMAI 136 (207)
T ss_dssp SEEEHHHHHHHHHHHSCSSSSTTHHHHHHHHCTTCSSEECHHHHHHHHHHH
T ss_pred CeEeHHHHHHHHHHHcCCCHHHHHHHHHHHhcCCCCCeEcHHHHHHHHHHH
Confidence 789999999999999866544444444445666778999999999999875
No 161
>1j55_A S-100P protein; metal binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.2 PDB: 1ozo_A
Probab=89.99 E-value=1.2 Score=33.10 Aligned_cols=68 Identities=10% Similarity=0.187 Sum_probs=46.5
Q ss_pred HHHHHHHHHHhcCCCC-CCccCHHHHHHHHHH-----cCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHh
Q psy9055 61 RKKLESLYSKYKDASE-PDKILVEGIMKFLDD-----LSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 61 ~~~l~~lFd~Y~d~~~-~~~I~~dG~~~~~ed-----Lgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 128 (284)
...|.++|..|-..+. .+.|+.+-+.+.+.. ||..+.+..+--+...+....-|.|+-+||+..|..+
T Consensus 8 ~~~l~~~F~~fD~~dgd~G~I~~~El~~~l~~~~~~~lg~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~~ 81 (95)
T 1j55_A 8 MGMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDANGDAQVDFSEFIVFVAAI 81 (95)
T ss_dssp HHHHHHHHHHHTTSSSCTTEECHHHHHHHHHHHSTTCC------CHHHHHHHHHCSSSSSSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCCCcCCHHHHHHHHHHHhHhhcccccCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHH
Confidence 3578889999952233 368999999999986 6766555444445555666778999999999998764
No 162
>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5
Probab=89.86 E-value=0.48 Score=39.06 Aligned_cols=66 Identities=12% Similarity=0.122 Sum_probs=55.0
Q ss_pred HHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHh
Q psy9055 62 KKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 62 ~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 128 (284)
+.+.++|..| |.+..+.|+.+-+.+.+..+|+.+....+-.|...+....-|.|+.+||+..+..+
T Consensus 10 ~~l~~~F~~~-D~d~dG~I~~~E~~~~l~~~g~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~~ 75 (188)
T 1s6i_A 10 GGLKELFKMI-DTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAATVHL 75 (188)
T ss_dssp CSHHHHHHTT-SSSSSSCEEHHHHHHHHTTTTCCCCHHHHHHHHHHTCTTCSSEECHHHHHHHHTTS
T ss_pred HHHHHHHHHH-CCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCeEeHHHHHHHHHHH
Confidence 5688899988 44455789999999999999999987777677777777788999999999988654
No 163
>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe}
Probab=89.81 E-value=1.7 Score=34.98 Aligned_cols=71 Identities=13% Similarity=0.143 Sum_probs=51.4
Q ss_pred cHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCc-hHHHHHHHhhcccccccccHHHHHHHHHHhCC
Q psy9055 60 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPES-KLVLIIAWRFKAAAQCEFSRDEFMNGMLELGC 130 (284)
Q Consensus 60 ~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped-~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~ 130 (284)
+++.+.++|..+-.....+.|+.+-+..++..+|..+.. ..+-.+...+....-|.|+.+||+..+..++.
T Consensus 23 ~~~el~~~f~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~ef~~~~~~~~~ 94 (190)
T 2l2e_A 23 DKKELQQWYKGFFKDCPSGHLNKSEFQKIYKQFFPFGDPSAFAEYVFNVFDADKNGYIDFKEFICALSVTSR 94 (190)
T ss_dssp CSHHHHHHHHHHHHHSCCCEECHHHHHHHHHHHCCCSCHHHHHHHHHHHHCSSSTTCEEHHHHHHHHTTSSC
T ss_pred CHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCCCccHHHHHHHHHhcCCCCCeEeHHHHHHHHHHHcC
Confidence 446788889888542124689999999999999765332 22333444566677899999999999987654
No 164
>3n22_A Protein S100-A2; EF-hand, calcium-binding, zinc-binding, tumor supressor, CAL binding protein; 1.30A {Homo sapiens} SCOP: a.39.1.2 PDB: 2rgi_A 4duq_A
Probab=89.80 E-value=1.6 Score=32.84 Aligned_cols=69 Identities=9% Similarity=0.070 Sum_probs=51.4
Q ss_pred HHHHHHHHHHhcCCCCC-CccCHHHHHHHHHH-----cCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHhC
Q psy9055 61 RKKLESLYSKYKDASEP-DKILVEGIMKFLDD-----LSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLELG 129 (284)
Q Consensus 61 ~~~l~~lFd~Y~d~~~~-~~I~~dG~~~~~ed-----Lgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~ 129 (284)
-..|.+.|..|-+.++. +.|+.+-+.+++.. ||..+.+-.+--+-..+-...-|.|+-+||+..+..+.
T Consensus 10 i~~l~~~F~~fd~~dgdgG~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~~~~~~ 84 (98)
T 3n22_A 10 LAVLVTTFHKYSSQEGDKFKLSKGEMKELLHKELPSFVGEKVDEEGLKKLMGSLDENSDQQVDFQEYAVFLALIT 84 (98)
T ss_dssp HHHHHHHHHHHHTTSSSTTSBCHHHHHHHHHHHCHHHHCSSCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCCCeECHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHH
Confidence 35788889999643333 49999999999985 55566655555555566677789999999999888753
No 165
>2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A
Probab=89.76 E-value=0.73 Score=38.22 Aligned_cols=70 Identities=17% Similarity=0.234 Sum_probs=53.1
Q ss_pred cHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHc-CCCCCchHHHHH----HHhhcccccccccHHHHHHHHHHhCC
Q psy9055 60 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDL-SLSPESKLVLII----AWRFKAAAQCEFSRDEFMNGMLELGC 130 (284)
Q Consensus 60 ~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edL-gv~ped~~~LvL----a~~l~a~~~g~~tr~eF~~g~~~l~~ 130 (284)
....+..+|..| |.+..+.|+.+-+.+++..+ |..+.+..+-.+ ...+....-|.|+.+||+..+...++
T Consensus 111 ~~~~l~~~F~~~-D~d~dG~Is~~El~~~l~~~~g~~~s~~~~~~l~~~~~~~~D~d~dG~Is~~EF~~~~~~~~~ 185 (208)
T 2ct9_A 111 RSNKLHFAFRLY-DLDKDDKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFVKVLEKVDV 185 (208)
T ss_dssp HHHHHHHHHHHH-CTTCSSEECHHHHHHHHHHHSCTTCCHHHHHHHHHHHHHHHCSSSSSSEEHHHHHHTTTTSCG
T ss_pred HHHHHHHHHHHH-CCCCCCEEcHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHhccCh
Confidence 456788899988 44455799999999999987 977765544333 44555667899999999999887654
No 166
>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A
Probab=89.69 E-value=1 Score=35.91 Aligned_cols=65 Identities=17% Similarity=0.341 Sum_probs=48.8
Q ss_pred HHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHh
Q psy9055 62 KKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 62 ~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 128 (284)
..+..+|..| |.+..+.|+.+-+.+++..+|..+..-.+-.+...+. ..-|.|+.+||+..+..+
T Consensus 77 ~~~~~~F~~~-D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d-d~dg~i~~~eF~~~~~~~ 141 (173)
T 1alv_A 77 KKWQAIYKQF-DVDRSGTIGSSELPGAFEAAGFHLNEHLYSMIIRRYS-DEGGNMDFDNFISCLVRL 141 (173)
T ss_dssp HHHHHHHHHH-CTTCCSSBCTTTHHHHHHHHTCCCCHHHHHHHHHHHT-CSSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHH-CCCCCCCCCHHHHHHHHHHcCCCCCHHHHHHHHHHhc-CCCCcCcHHHHHHHHHHH
Confidence 4577788888 4444578999999999999998876654444444444 667999999999988764
No 167
>1whc_A RSGI RUH-027, UBA/UBX 33.3 kDa protein; UBA domain, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Mus musculus} SCOP: a.5.2.1
Probab=89.68 E-value=0.2 Score=35.76 Aligned_cols=39 Identities=13% Similarity=0.112 Sum_probs=34.5
Q ss_pred HHHHHHHHhhhCCCHHHHHHHHHhC-CCChHHHHHhhcCCC
Q psy9055 9 KDKVKRFISFTQTGELTAINCLSQN-DWKLDLASDNYFQNP 48 (284)
Q Consensus 9 ~~~i~qF~~iT~~s~~~A~~~L~~~-~w~l~~A~~~fy~~~ 48 (284)
.+.|++.+++ |-++..|++.|..+ +||++.|++-.++.+
T Consensus 10 ~~~v~~L~~M-GF~~~~a~~AL~~t~~~nve~A~ewLl~~~ 49 (64)
T 1whc_A 10 LTALESLIEM-GFPRGRAEKALALTGNQGIEAAMDWLMEHE 49 (64)
T ss_dssp CCHHHHHHTT-TCCHHHHHHHHHHHTSCCHHHHHHHHHHHT
T ss_pred HHHHHHHHHc-CCCHHHHHHHHHHhcCCCHHHHHHHHHhCC
Confidence 4579999995 99999999999999 799999999888654
No 168
>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5
Probab=89.63 E-value=2 Score=34.47 Aligned_cols=114 Identities=10% Similarity=0.036 Sum_probs=67.9
Q ss_pred chHHHHHHHHhhhCCCHHHHHHHHHhC-----CCChHHH-HHhhcCCCccchhccC-CcccHHHHHHHHHHhcCCCCCCc
Q psy9055 7 SQKDKVKRFISFTQTGELTAINCLSQN-----DWKLDLA-SDNYFQNPSAYYKEQK-SSVDRKKLESLYSKYKDASEPDK 79 (284)
Q Consensus 7 ~~~~~i~qF~~iT~~s~~~A~~~L~~~-----~w~l~~A-~~~fy~~~~~~~~~~~-~~~~~~~l~~lFd~Y~d~~~~~~ 79 (284)
-.++.++.....|+.+++....+.+.. +..|... +...+ +... .......+..+|..+- .+..+.
T Consensus 8 l~~~~l~~l~~~~~~~~~~i~~~f~~fd~~~~~G~i~~~e~~~~l-------~~~~~~~~~~~~~~~~f~~~D-~d~~g~ 79 (193)
T 1bjf_A 8 LRPEVMQDLLESTDFTEHEIQEWYKGFLRDCPSGHLSMEEFKKIY-------GNFFPYGDASKFAEHVFRTFD-ANGDGT 79 (193)
T ss_dssp CCHHHHHHHHHHSSCCHHHHHHHHHHHHHHSTTSEEEHHHHHHHH-------TTTSSSSCCHHHHHHHHHHHC-SSCSSE
T ss_pred CCHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCCCcCHHHHHHHH-------HHhcCcCChHHHHHHHHHHhC-CCCCCc
Confidence 345677788888888887655544332 1111100 00000 0000 1123456788888884 334468
Q ss_pred cCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHh
Q psy9055 80 ILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 80 I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 128 (284)
|+.+-+..++..++..+..-.+-.+-..+-...-|.|+++||...+..+
T Consensus 80 i~~~Ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~I~~~E~~~~~~~~ 128 (193)
T 1bjf_A 80 IDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAI 128 (193)
T ss_dssp EEHHHHHHHHHHHTSSCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHcCCCHHHHHHHHHhhcCCCCCCeECHHHHHHHHHHH
Confidence 9999999888888776544333334445666777899999999888764
No 169
>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A
Probab=89.56 E-value=3.9 Score=32.05 Aligned_cols=60 Identities=12% Similarity=0.083 Sum_probs=45.0
Q ss_pred HHHhcCCCCCCccCHHHHHHHHHHcCC-----CCCchHHHHHHHhhcccccccccHHHHHHHHHHh
Q psy9055 68 YSKYKDASEPDKILVEGIMKFLDDLSL-----SPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 68 Fd~Y~d~~~~~~I~~dG~~~~~edLgv-----~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 128 (284)
|..+ |.+..+.|+.+-+.+.+..||+ .+....+--+...+....-|.|+.+||+..+..+
T Consensus 5 F~~~-D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~ 69 (165)
T 1k94_A 5 YFSA-VAGQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAAL 69 (165)
T ss_dssp HHHH-HHGGGTSBCHHHHHHHHHHHTTTTTSCCCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHH
T ss_pred HHHH-hCCCCCcCCHHHHHHHHHHhccccCCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHH
Confidence 4444 2233478999999999999998 4455555556666777778999999999988763
No 170
>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus}
Probab=89.42 E-value=1.2 Score=38.41 Aligned_cols=68 Identities=12% Similarity=0.075 Sum_probs=39.3
Q ss_pred cHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHh
Q psy9055 60 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 60 ~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 128 (284)
....+..+|..+- .+..+.|+.+-+..++..++..+..-.+-.+-..+-...-|.|+.+||...+..+
T Consensus 127 ~~~~~~~~f~~~D-~d~dG~I~~~Ef~~~l~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~Ef~~~l~~~ 194 (256)
T 2jul_A 127 ATTYAHFLFNAFD-ADGNGAIHFEDFVVGLSILLRGTVHEKLKWAFNLYDINKDGCITKEEMLAIMKSI 194 (256)
T ss_dssp CHHHHHHHHHHSS-CSCCSEECSHHHHHHHHHHHSCCHHHHHHHHHHHTCCSSSSCBCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHhc-cCCCCcCcHHHHHHHHHHHhccChHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 3455666776663 2333567777777777766654433333223334445556777777777776664
No 171
>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A
Probab=89.38 E-value=0.82 Score=35.20 Aligned_cols=64 Identities=9% Similarity=0.164 Sum_probs=45.6
Q ss_pred cHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHH
Q psy9055 60 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML 126 (284)
Q Consensus 60 ~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~ 126 (284)
....+..+|..| |.+..+.|+.+-+.+++..+|..+.+-.+-.+...+ ..-|.|+.+||+.-|.
T Consensus 82 ~~~~l~~~F~~~-D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~l~ 145 (146)
T 2qac_A 82 NVEELIKMFAHF-DNNCTGYLTKSQMKNILTTWGDALTDQEAIDALNAF--SSEDNIDYKLFCEDIL 145 (146)
T ss_dssp CHHHHHHHHHTT-CTTCSSEEEHHHHHHHHHHSSSCCCHHHHHHHHHHH--CSSSEEEHHHHHHHHT
T ss_pred hHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHhCCCCCHHHHHHHHHHc--CCCCcCcHHHHHHHHh
Confidence 457788888888 444457899999999999998766544443333333 5568899999987653
No 172
>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5
Probab=89.38 E-value=2.3 Score=33.34 Aligned_cols=73 Identities=16% Similarity=0.157 Sum_probs=47.2
Q ss_pred HHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCc--------hHHHHHHHhhcccccccccHHHHHHHHHHhCCCcHHHH
Q psy9055 65 ESLYSKYKDASEPDKILVEGIMKFLDDLSLSPES--------KLVLIIAWRFKAAAQCEFSRDEFMNGMLELGCDSIEKL 136 (284)
Q Consensus 65 ~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped--------~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~~si~~l 136 (284)
..+|..+ |.+..+.|+.+-+..++..+...+.. ..+-.+-..+-...-|.|+++||...+..+| -+.+.+
T Consensus 61 ~~lf~~~-D~d~dg~i~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~g-~~~~~~ 138 (176)
T 1nya_A 61 DYLAKEA-GVGSDGSLTEEQFIRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTALG-MSKAEA 138 (176)
T ss_dssp HHHHHHH-TSCTTCCBCHHHHHHHHHHHHSSSCHHHHHHHHHHHHHHHHHHTCSSCCSEEEHHHHHHHHHHTT-CCHHHH
T ss_pred HHHHHHh-CCCCCCeEcHHHHHHHHHHHhcCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHhC-CCHHHH
Confidence 3677766 33444679999998888877666554 1122233345566678999999999988887 344444
Q ss_pred Hhh
Q psy9055 137 KMR 139 (284)
Q Consensus 137 k~~ 139 (284)
+..
T Consensus 139 ~~~ 141 (176)
T 1nya_A 139 AEA 141 (176)
T ss_dssp HHH
T ss_pred HHH
Confidence 333
No 173
>2kax_A Protein S100-A5; EF-hand, calcium binding protien, calcium, polymorphism, structural genomics, spine2, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 2kay_A
Probab=89.33 E-value=1.2 Score=32.71 Aligned_cols=66 Identities=11% Similarity=0.142 Sum_probs=47.8
Q ss_pred HHHHHHHHHhcCCCCCC-ccCHHHHHHHHHH---cC-CCCCchHHHHHHHhhcccccccccHHHHHHHHHHhC
Q psy9055 62 KKLESLYSKYKDASEPD-KILVEGIMKFLDD---LS-LSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLELG 129 (284)
Q Consensus 62 ~~l~~lFd~Y~d~~~~~-~I~~dG~~~~~ed---Lg-v~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~ 129 (284)
..|...|..|-+.+..+ .|+.+-+.+++.. +| ++++.+. .+...+....-|.|+-+||+..+..+.
T Consensus 10 ~~l~~~F~~~D~~d~dG~~I~~~El~~~l~~~~~~~~~~~~~i~--~~~~~~D~d~dG~I~f~EF~~~~~~~~ 80 (92)
T 2kax_A 10 TTMVTTFHKYSGREGSKLTLSRKELKELIKKELCLGEMKESSID--DLMKSLDKNSDQEIDFKEYSVFLTMLC 80 (92)
T ss_dssp HHHHHHHHHHHTTSSCSSEEEHHHHHHHHHHHSCCTTTCCTTHH--HHHHHHTTTCSSEEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCCCCCeeCHHHHHHHHHHHcCCCCCCHHHHH--HHHHHhCCCCCCcCcHHHHHHHHHHHH
Confidence 57888999997445556 9999999999986 44 3333333 333455666679999999999987753
No 174
>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii}
Probab=89.30 E-value=1.1 Score=35.88 Aligned_cols=66 Identities=15% Similarity=0.258 Sum_probs=42.9
Q ss_pred cHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHh
Q psy9055 60 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 60 ~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 128 (284)
....+..+|..| |.+..+.|+.+-+.+++. |..+.+-.+-.+...+....-|.|+.+||++.|..+
T Consensus 121 ~~~~~~~~F~~~-D~d~~G~I~~~E~~~~l~--~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~ 186 (191)
T 3khe_A 121 SRERLLAAFQQF-DSDGSGKITNEELGRLFG--VTEVDDETWHQVLQECDKNNDGEVDFEEFVEMMQKI 186 (191)
T ss_dssp CHHHHHHHHHHH-CTTCSSEECHHHHHHHTT--SSCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHH
T ss_pred hHHHHHHHHHHH-CCCCcCcCCHHHHHHHHc--cCCCCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 345677777777 333446788888887777 555555444445555555566778888888777663
No 175
>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus}
Probab=89.25 E-value=0.56 Score=38.46 Aligned_cols=71 Identities=13% Similarity=0.132 Sum_probs=54.4
Q ss_pred HHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchH-HHHHHHhhcccccccccHHHHHHHHHHhCCC
Q psy9055 61 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKL-VLIIAWRFKAAAQCEFSRDEFMNGMLELGCD 131 (284)
Q Consensus 61 ~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~-~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~~ 131 (284)
.+.+..+|..|-..+..+.|+.+-+..++..+|++|.... +--+...+....-|.|+.+||+..+..++..
T Consensus 13 ~~el~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~I~~~Ef~~~~~~~~~~ 84 (198)
T 2r2i_A 13 ATECHQWYKKFMTECPSGQLTLYEFKQFFGLKNLSPSANKYVEQMFETFDFNKDGYIDFMEYVAALSLVLKG 84 (198)
T ss_dssp TSCHHHHHHHHHHHCTTSEECHHHHHHHHTCCSCCHHHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHSSC
T ss_pred HHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCcchHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHccC
Confidence 3467788888864323478999999999999999887644 3345556667778999999999999987654
No 176
>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E
Probab=89.22 E-value=1 Score=36.03 Aligned_cols=70 Identities=13% Similarity=0.207 Sum_probs=51.7
Q ss_pred cHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCC-CCchHHHHHHHhhcccccccccHHHHHHHHHHhC
Q psy9055 60 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLS-PESKLVLIIAWRFKAAAQCEFSRDEFMNGMLELG 129 (284)
Q Consensus 60 ~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~-ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~ 129 (284)
+++.+..+|..|..-+..+.|+.+-+..++..+|.. +....+-.+-..+....-|.|+.+||+..+..++
T Consensus 16 s~~~i~~l~~~fd~~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~ 86 (183)
T 1s6c_A 16 TKRELQVLYRGFKNEXPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILL 86 (183)
T ss_dssp CHHHHHHHHHHHHHHCTTSEECHHHHHHHHHHHSTTSCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHHcCCCChHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHHc
Confidence 456666666666531233689999999999999976 4444444556667777789999999999998764
No 177
>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8
Probab=89.16 E-value=1.4 Score=34.92 Aligned_cols=64 Identities=14% Similarity=0.278 Sum_probs=47.5
Q ss_pred HHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHh
Q psy9055 62 KKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 62 ~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 128 (284)
..+..+|..| |.+..+.|+.+-+.+++..+|..+....+-.+...+ ..-|.|+.+||+..+..+
T Consensus 72 ~~~~~~F~~~-D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~~~~~ 135 (167)
T 1gjy_A 72 NGWRQHFISF-DSDRSGTVDPQELQKALTTMGFRLNPQTVNSIAKRY--STSGKITFDDYIACCVKL 135 (167)
T ss_dssp HHHHHHHHHH-CTTCCSEECHHHHHHHHHTTTCCCCHHHHHHHHHHT--CBTTBEEHHHHHHHHHHH
T ss_pred HHHHHHHHHh-CCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHh--CcCCcCcHHHHHHHHHHH
Confidence 4677778887 444557899999999999999876654443333333 567899999999988774
No 178
>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ...
Probab=89.15 E-value=1.5 Score=34.04 Aligned_cols=63 Identities=14% Similarity=0.193 Sum_probs=48.4
Q ss_pred HHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHh
Q psy9055 61 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 61 ~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 128 (284)
...+..+|..|- .+..+.|+.+-+.+.+..+|+.+....+-.+. . ..-|.|+.++|+..+...
T Consensus 17 ~~~l~~~F~~~D-~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~---~-~~~g~i~~~eF~~~~~~~ 79 (156)
T 1wdc_B 17 IQEMKEAFSMID-VDRDGFVSKEDIKAISEQLGRAPDDKELTAML---K-EAPGPLNFTMFLSIFSDK 79 (156)
T ss_dssp HHHHHHHHHHHC-TTCSSSCCHHHHHHHHHHHSSCCCHHHHHHHH---T-TSSSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHC-CCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHH---H-hCCCcCcHHHHHHHHHHH
Confidence 456888899884 44557899999999999999998765443333 2 346999999999998764
No 179
>2ovk_B RLC, myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, contractIle protein; 2.60A {Todarodes pacificus} PDB: 2ekv_B 2ekw_B 2oy6_B* 3i5f_B* 3i5g_B 3i5h_B 3i5i_B
Probab=89.11 E-value=0.65 Score=36.13 Aligned_cols=62 Identities=13% Similarity=0.165 Sum_probs=49.1
Q ss_pred HHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHH
Q psy9055 61 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE 127 (284)
Q Consensus 61 ~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~ 127 (284)
.+.+..+|..| |.+..+.|+.+-+.+++..+|+.+....+-.+...+ -|.|+.++|+..+..
T Consensus 15 ~~~l~~~F~~~-D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~----~g~i~~~eF~~~~~~ 76 (153)
T 2ovk_B 15 MQELKEAFTMI-DQDRDGFIGMEDLKDMFSSLGRVPPDDELNAMLKEC----PGQLNFTAFLTLFGE 76 (153)
T ss_dssp HHHHHHHHHHH-CCSTTTCCCHHHHHHHTTTTTSCCCHHHHHHHHHHS----SSCCCSHHHHHTTTT
T ss_pred HHHHHHHHHHh-CCCCCCeECHHHHHHHHHHhCCCCCHHHHHHHHHHc----CCCCCHHHHHHHHHH
Confidence 45678888888 434457899999999999999999876665555444 789999999998765
No 180
>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii}
Probab=89.09 E-value=0.73 Score=37.06 Aligned_cols=67 Identities=13% Similarity=0.138 Sum_probs=51.8
Q ss_pred cHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHc-----------CCCCCchHHHHHHHhhcccccccccHHHHHHHHHH
Q psy9055 60 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDL-----------SLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE 127 (284)
Q Consensus 60 ~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edL-----------gv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~ 127 (284)
....+.++|..| |.+..+.|+.+-+...+..+ |..+....+-.+...+....-|.|+.+||+..+..
T Consensus 38 ~~~~l~~~F~~~-D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~~g~i~~~ef~~~~~~ 115 (191)
T 3khe_A 38 ETKELTQIFRQL-DNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDRNGYIEYSEFVTVCMD 115 (191)
T ss_dssp TTHHHHHHHHHH-CTTCSSEECHHHHHHHHHHHHC-----CCHHHHHHHHHHHHHHHHHTCTTCSSSEEHHHHHHHHSC
T ss_pred HHHHHHHHHHHH-cCCCCCCCcHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHhCCCCCCcCCHHHHHHHHHH
Confidence 347899999999 33445789999999999988 66655555555666677777899999999998754
No 181
>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A
Probab=89.03 E-value=1.5 Score=34.47 Aligned_cols=65 Identities=15% Similarity=0.128 Sum_probs=50.0
Q ss_pred HHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHh
Q psy9055 61 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 61 ~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 128 (284)
...+..+|..| |.+..+.|+.+-+.+++..+|++++.+..+ ...+....-|.|+.+||+..+..+
T Consensus 93 ~~~~~~~F~~~-D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~--~~~~D~d~dg~i~~~ef~~~~~~~ 157 (174)
T 1q80_A 93 EGPLPLFFRAV-DTNEDNNISRDEYGIFFGMLGLDKTMAPAS--FDAIDTNNDGLLSLEEFVIAGSDF 157 (174)
T ss_dssp HTHHHHHHHHH-CTTSSSSBCHHHHHHHHHHHTCCGGGHHHH--HHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHh-CCCCCCcccHHHHHHHHHHcCCCHHHHHHH--HHHhCCCCCceEeHHHHHHHHHHH
Confidence 36788899988 444457899999999999999877654433 333455667999999999998764
No 182
>3a8r_A Putative uncharacterized protein; EF-hand, membrane, oxidoreductase, transmembrane, calcium BI protein; 2.40A {Oryza sativa japonica group}
Probab=88.73 E-value=0.56 Score=38.69 Aligned_cols=67 Identities=9% Similarity=0.188 Sum_probs=43.3
Q ss_pred HHHHHHHHHHhcCCCCCCccCHHHHHHHHH-HcCCC-C------CchHHHHHHHhhcccccccccHHHHHHHHHHh
Q psy9055 61 RKKLESLYSKYKDASEPDKILVEGIMKFLD-DLSLS-P------ESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 61 ~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~e-dLgv~-p------ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 128 (284)
...+..+|..| |.+..+.|+.+-+.+.+. .+|.+ + .+..+--+...+....-|.|+.+||+..|...
T Consensus 97 ~~~l~~~F~~~-D~d~dG~Is~~El~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~ 171 (179)
T 3a8r_A 97 DNRLRTFFDMV-DKNADGRLTAEEVKEIIALSASANKLSKIKERADEYTALIMEELDPTNLGYIEMEDLEALLLQS 171 (179)
T ss_dssp HHHHHHHHHHH-CTTCSSCBCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHSTTCCSEECHHHHHHHHC--
T ss_pred HHHHHHHHHHH-CCCCCCcCCHHHHHHHHHHHhccccccccccchHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhC
Confidence 45677888887 444557788888888887 78776 4 22222223334445566888888888877653
No 183
>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii}
Probab=88.71 E-value=1.8 Score=34.88 Aligned_cols=65 Identities=11% Similarity=0.033 Sum_probs=49.1
Q ss_pred HHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHh
Q psy9055 61 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 61 ~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 128 (284)
...+..+|..| |.+..+.|+.+-+.+++..+|++++.+. .+...+-...-|.|+.+||+..+..+
T Consensus 108 ~~~~~~~F~~~-D~d~dG~I~~~E~~~~l~~~g~~~~~~~--~~~~~~D~d~dG~i~~~Ef~~~~~~~ 172 (191)
T 2ccm_A 108 TKYMNFMFDVN-DTSGDNIIDKHEYSTVYMSYGIPKSDCD--AAFDTLSDGGKTMVTREIFARLWTEY 172 (191)
T ss_dssp HHHHHHHHHHH-CTTCSSBCCHHHHHHHHHTTTCCHHHHH--HHHHHHTTTTTSCCBHHHHHHHHHHH
T ss_pred HHHHHHHHHHh-CCCCCCcCcHHHHHHHHHHhCCCHHHHH--HHHHHhCCCCCCCcCHHHHHHHHHHH
Confidence 45688889888 4445578999999999999996655443 23334455667999999999998875
No 184
>2ooa_A E3 ubiquitin-protein ligase CBL-B; alpha-helical domain; 1.56A {Homo sapiens} PDB: 2oob_A 2jnh_A 2do6_A
Probab=88.59 E-value=0.81 Score=31.51 Aligned_cols=34 Identities=9% Similarity=0.058 Sum_probs=30.3
Q ss_pred HHHHHHHHhhhCCCHHHHHHHHHhCCCChHHHHHh
Q psy9055 9 KDKVKRFISFTQTGELTAINCLSQNDWKLDLASDN 43 (284)
Q Consensus 9 ~~~i~qF~~iT~~s~~~A~~~L~~~~w~l~~A~~~ 43 (284)
.+.|++.|++ |-+.+.|++.|..+++|++.|.+-
T Consensus 12 ~~~Ia~Lm~m-GFsr~~ai~AL~~a~nnve~Aani 45 (52)
T 2ooa_A 12 DAKIAKLMGE-GYAFEEVKRALEIAQNNVEVARSI 45 (52)
T ss_dssp HHHHHHHHHT-TCCHHHHHHHHHHTTTCHHHHHHH
T ss_pred HHHHHHHHHc-CCCHHHHHHHHHHhCCCHHHHHHH
Confidence 3678888885 999999999999999999999874
No 185
>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1}
Probab=88.51 E-value=0.73 Score=38.23 Aligned_cols=66 Identities=9% Similarity=0.209 Sum_probs=45.1
Q ss_pred HHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHH
Q psy9055 61 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE 127 (284)
Q Consensus 61 ~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~ 127 (284)
...|.++|..+ |.+..+.|+.+-+...+..+|..+....+-.|...+....-|.|+.+||+..+..
T Consensus 56 ~~~l~~~F~~~-D~d~~G~Is~~El~~~l~~~g~~~~~~~~~~l~~~~D~d~~g~I~~~EF~~~~~~ 121 (197)
T 3pm8_A 56 INNLRNIFIAL-DVDNSGTLSSQEILDGLKKIGYQKIPPDIHQVLRDIDSNASGQIHYTDFLAATID 121 (197)
T ss_dssp HHHHHHHHHHH-CTTCSSEECHHHHHHHHHHHC----CHHHHHHHHC-------CEEHHHHHHTTCC
T ss_pred HHHHHHHHHHH-CCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHH
Confidence 46788889888 4445579999999999999999988777777777777777899999999987643
No 186
>2dag_A Ubiquitin carboxyl-terminal hydrolase 5; isopeptidase T, ubiquitin specific protease 5 (USP 5), UBA domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=88.50 E-value=0.4 Score=35.17 Aligned_cols=40 Identities=3% Similarity=-0.053 Sum_probs=34.9
Q ss_pred hHHHHHHHHhhhCCCHHHHHHHHHhCC-CChHHHHHhhcCCC
Q psy9055 8 QKDKVKRFISFTQTGELTAINCLSQND-WKLDLASDNYFQNP 48 (284)
Q Consensus 8 ~~~~i~qF~~iT~~s~~~A~~~L~~~~-w~l~~A~~~fy~~~ 48 (284)
..+.|++.+++ |-++..|++.|..++ ||++.|++-.|+..
T Consensus 9 ~e~~v~~L~~M-GF~~~~a~~AL~~t~n~~ve~A~ewL~~~~ 49 (74)
T 2dag_A 9 DESVIIQLVEM-GFPMDACRKAVYYTGNSGAEAAMNWVMSHM 49 (74)
T ss_dssp CHHHHHHHHHH-SCCHHHHHHHHHHHTSCCHHHHHHHHHHHT
T ss_pred CHHHHHHHHHc-CCCHHHHHHHHHHhCCCCHHHHHHHHHhCC
Confidence 46789999995 999999999999998 58999999988643
No 187
>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens}
Probab=88.49 E-value=1.1 Score=37.29 Aligned_cols=72 Identities=10% Similarity=0.038 Sum_probs=49.3
Q ss_pred ccHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchH-HHHHHHhhcccccccccHHHHHHHHHHhCC
Q psy9055 59 VDRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKL-VLIIAWRFKAAAQCEFSRDEFMNGMLELGC 130 (284)
Q Consensus 59 ~~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~-~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~ 130 (284)
...+.|.++|..|-..+..+.|+.+-+.+++..+|++|.... +--+...+....-|.|+.+||+..+..++.
T Consensus 16 ls~~ei~~~f~~fD~~~~~G~is~~El~~~l~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~ 88 (211)
T 2ggz_A 16 VPTQETHVWYRTFMMEYPSGLQTLHEFKTLLGLQGLNQKANKHIDQVYNTFDTNKDGFVDFLEFIAAVNLIMQ 88 (211)
T ss_dssp --------CCCSHHHHCTTSEEEHHHHHHHTTCCSCCHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHSC
T ss_pred CCHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCcchHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHhcc
Confidence 355778888888854223478999999999999999876543 334455666777899999999999998764
No 188
>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5
Probab=88.32 E-value=1.5 Score=37.21 Aligned_cols=67 Identities=9% Similarity=0.120 Sum_probs=27.9
Q ss_pred HHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHh
Q psy9055 61 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 61 ~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 128 (284)
...+..+|..+- .+..+.|+.+-+..++..++..+..-.+-.+-..+-...-|.|+++||...+..+
T Consensus 88 ~~~~~~~f~~~D-~d~~G~I~~~Ef~~~l~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~l~~~ 154 (224)
T 1s1e_A 88 STYAHYLFNAFD-TTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAI 154 (224)
T ss_dssp HHHHHHHHHHHC-TTCSSCBCHHHHHHHHHHHHHCCHHHHHHHHHHHHCTTCCSEECHHHHHHHHHHH
T ss_pred HHHHHHHHHHhc-CCCCCcEeHHHHHHHHHHHccCCHHHHHHHHHHHHcCCCCCeECHHHHHHHHHHH
Confidence 344445555442 2222445555555555444432222111112222333444555555555555443
No 189
>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola}
Probab=88.21 E-value=2.2 Score=35.08 Aligned_cols=62 Identities=11% Similarity=0.215 Sum_probs=48.5
Q ss_pred HHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHh
Q psy9055 64 LESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 64 l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 128 (284)
+..+|..| |.+..+.|+.+-+.+++..+|++++.+..+ .-.+....-|.|+.+||+..+...
T Consensus 130 ~~~~F~~~-D~d~~G~Is~~El~~~l~~~g~~~~~~~~~--~~~~D~d~dG~I~~~EF~~~~~~~ 191 (208)
T 2hpk_A 130 SNSYYDVL-DDDGDGTVDVDELKTMMKAFDVPQEAAYTF--FEKADTDKSGKLERTELVHLFRKF 191 (208)
T ss_dssp HHHHHHHH-CTTCSSSBCHHHHHHHHHHTTSCTTHHHHH--HHHHCTTCCSSBCHHHHHHHHHHH
T ss_pred HHHHHHHh-CCCCCCcCCHHHHHHHHHHhCcCHHHHHHH--HHHhCCCCCCcCcHHHHHHHHHHH
Confidence 78899988 444557899999999999999776655433 334455667999999999998875
No 190
>3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein; 1.45A {Homo sapiens} SCOP: a.39.1.2 PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A
Probab=88.11 E-value=1.9 Score=32.93 Aligned_cols=67 Identities=10% Similarity=0.120 Sum_probs=50.7
Q ss_pred HHHHHHHHHhcCCCC-CCccCHHHHHHHHHH-----cCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHh
Q psy9055 62 KKLESLYSKYKDASE-PDKILVEGIMKFLDD-----LSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 62 ~~l~~lFd~Y~d~~~-~~~I~~dG~~~~~ed-----Lgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 128 (284)
..|.+.|..|-+.++ .+.|+.+-+.+++.. ||-.+.+-.+=-+-..+-...-|.|+-+||+.-+..+
T Consensus 10 ~~l~~aF~~fd~~dg~~G~Is~~EL~~~l~~~l~~~lg~~~~~~ev~~~i~~~D~dgDG~Idf~EF~~~~~~~ 82 (101)
T 3nso_A 10 AAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYVRSLACL 82 (101)
T ss_dssp HHHHHHHHHHHTTSSCTTEECHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHHHCCCSCEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhcCCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence 567888999964333 379999999999985 4666666555555555666778999999999988775
No 191
>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C
Probab=88.05 E-value=0.32 Score=37.65 Aligned_cols=64 Identities=11% Similarity=0.138 Sum_probs=48.7
Q ss_pred HHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHH
Q psy9055 61 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML 126 (284)
Q Consensus 61 ~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~ 126 (284)
...+..+|..| |.+..+.|+.+-+.+++..+|..+.+..+-.+...+. ..-|.|+.+||+..+.
T Consensus 86 ~~~l~~~F~~~-D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d-~~dg~i~~~eF~~~~~ 149 (151)
T 1w7j_B 86 YEDYLEGFRVF-DKEGNGKVMGAELRHVLTTLGEKMTEEEVETVLAGHE-DSNGCINYEAFLKHIL 149 (151)
T ss_dssp --CCHHHHHTT-CTTSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHTTCC-CTTSEEEHHHHHHHTC
T ss_pred HHHHHHHHHHh-CCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHhcc-CCCCeEeHHHHHHHHh
Confidence 34567788888 4445578999999999999998876665555555666 7789999999998764
No 192
>1a4p_A S100A10; S100 family, EF-hand protein, ligand of annexin II, calcium/phospholipid binding protein, calcium-phospholipid protein complex; 2.25A {Homo sapiens} SCOP: a.39.1.2 PDB: 1bt6_A
Probab=87.92 E-value=0.95 Score=33.75 Aligned_cols=67 Identities=10% Similarity=0.130 Sum_probs=49.5
Q ss_pred HHHHHHHHHHhcCCCCCCccCHHHHHHHHHH-----cCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHhC
Q psy9055 61 RKKLESLYSKYKDASEPDKILVEGIMKFLDD-----LSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLELG 129 (284)
Q Consensus 61 ~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~ed-----Lgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~ 129 (284)
...|.+.|..|-+. + +.|+.+-+...+.. ||..+.+-.+--+...+....-|.|+-+||+..|..+.
T Consensus 8 ~~~l~~~F~~fD~~-d-g~Is~~El~~~l~~~~~~~lg~~~~~~ev~~l~~~~D~d~dG~I~f~EF~~~~~~~~ 79 (96)
T 1a4p_A 8 METMMFTFHKFAGD-K-GYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAGLT 79 (96)
T ss_dssp HHHHHHHHHHHHGG-G-CSBCHHHHHHHHHHHCHHHHHHSCCTTHHHHHHHHHCTTSSSCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCC-C-CeECHHHHHHHHHHHcccccccccCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHH
Confidence 35688889999532 3 38999999999975 66666555554455566667789999999999988753
No 193
>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A
Probab=87.73 E-value=2.2 Score=34.19 Aligned_cols=110 Identities=10% Similarity=0.049 Sum_probs=64.6
Q ss_pred hHHHHHHHHhhhCCCHHHHHHHHHhCC-----CCh-----HHHHHhhcCCCccchhccCCcccHHHHHHHHHHhcCCCCC
Q psy9055 8 QKDKVKRFISFTQTGELTAINCLSQND-----WKL-----DLASDNYFQNPSAYYKEQKSSVDRKKLESLYSKYKDASEP 77 (284)
Q Consensus 8 ~~~~i~qF~~iT~~s~~~A~~~L~~~~-----w~l-----~~A~~~fy~~~~~~~~~~~~~~~~~~l~~lFd~Y~d~~~~ 77 (284)
.++.++++...|+.+...-..+.+..+ ..| ..++...+. .......+..+|..+- .+..
T Consensus 9 ~~~~l~~l~~~~~~~~~~i~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~----------~~~~~~~~~~~f~~~D-~d~~ 77 (190)
T 1g8i_A 9 KPEVVEELTRKTYFTEKEVQQWYKGFIKDCPSGQLDAAGFQKIYKQFFP----------FGDPTKFATFVFNVFD-ENKD 77 (190)
T ss_dssp CHHHHHHHHHTSSSCHHHHHHHHHHHHHHCTTSEEEHHHHHHHHHHHCT----------TSCTHHHHHHHHHHHC-TTCS
T ss_pred CHHHHHHHHHccCCCHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCC----------CCChHHHHHHHHHHHh-cCCC
Confidence 456778888888887766555444321 111 111111110 0123456777888774 3344
Q ss_pred CccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHh
Q psy9055 78 DKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 78 ~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 128 (284)
+.|+.+-+..++..++..+..-.+-.+-..+-...-|.|+++||...+..+
T Consensus 78 g~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~l~~~ 128 (190)
T 1g8i_A 78 GRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDIVDAI 128 (190)
T ss_dssp SEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHH
T ss_pred CeEeHHHHHHHHHHhcCCCHHHHHHHHHHhhcCCCCCeECHHHHHHHHHHH
Confidence 678888888888877765443333334445556667888888888887773
No 194
>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia}
Probab=87.56 E-value=1.1 Score=36.88 Aligned_cols=122 Identities=6% Similarity=-0.020 Sum_probs=76.7
Q ss_pred CCcchHHHHH-HHHhh----hC-CCHHHHHHHHHhCCCChHH-HHHhhcCCCcc---c------hh-ccCCcccHHHHHH
Q psy9055 4 LKSSQKDKVK-RFISF----TQ-TGELTAINCLSQNDWKLDL-ASDNYFQNPSA---Y------YK-EQKSSVDRKKLES 66 (284)
Q Consensus 4 l~~~~~~~i~-qF~~i----T~-~s~~~A~~~L~~~~w~l~~-A~~~fy~~~~~---~------~~-~~~~~~~~~~l~~ 66 (284)
++..+...++ -|..+ .| .+...-..+|...+.++.. -+...+..-.+ + .. ..........+..
T Consensus 51 ls~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~l~~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~ 130 (196)
T 3dtp_E 51 FTQHQVQEFKEAFQLIDQDKDGFISKNDIRATFDSLGRLCTEQELDSMVAEAPGPINFTMFLTIFGDRIAGTDEEDVIVN 130 (196)
T ss_dssp SCTTTHHHHHHHHHHHCCSCSSBCCHHHHHHHHHTTSCCCCHHHHHHHHTTSSSCCBHHHHHHHHHHCCCSSCCHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHccCCCcHHHHHHHHHHHhcCCCcHHHHHH
Confidence 4555555554 34333 23 3566777777776665432 23333322111 1 01 1122334678888
Q ss_pred HHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHH
Q psy9055 67 LYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE 127 (284)
Q Consensus 67 lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~ 127 (284)
+|..| |.+..+.|+.+-+.+++ .+|..+.+-.+-.|.-.+....-|.|+.++|++.|..
T Consensus 131 ~F~~~-D~d~~G~Is~~El~~~l-~~g~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~ 189 (196)
T 3dtp_E 131 AFNLF-DEGDGKCKEETLKRSLT-TWGEKFSQDEVDQALSEAPIDGNGLIDIKKFAQILTK 189 (196)
T ss_dssp HHHTT-CSSSSCCBHHHHHHHHH-HSSSCCCHHHHHHHHHSSCEETTEECHHHHHHHHHSS
T ss_pred HHHHH-CCCCCCcCcHHHHHHHH-HcCCCCCHHHHHHHHHHcCCCCCCEEeHHHHHHHHHc
Confidence 99988 44455789999999999 9998877666666666666667899999999987765
No 195
>2d9s_A CBL E3 ubiquitin protein ligase; UBA domain, dimer, protein binding, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=87.51 E-value=1 Score=31.12 Aligned_cols=36 Identities=11% Similarity=0.114 Sum_probs=31.3
Q ss_pred HHHHHHHHhhhCCCHHHHHHHHHhCCCChHHHHHhhc
Q psy9055 9 KDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYF 45 (284)
Q Consensus 9 ~~~i~qF~~iT~~s~~~A~~~L~~~~w~l~~A~~~fy 45 (284)
...|++.|++ |.+.+.|++.|...++|++.|.+---
T Consensus 10 e~~I~~L~~l-GF~r~~ai~AL~~a~nnve~Aa~iL~ 45 (53)
T 2d9s_A 10 SSEIERLMSQ-GYSYQDIQKALVIAHNNIEMAKNILR 45 (53)
T ss_dssp HHHHHHHHHH-TCCHHHHHHHHHHTTTCHHHHHHHHH
T ss_pred HHHHHHHHHc-CCCHHHHHHHHHHhcCCHHHHHHHHH
Confidence 3568888885 99999999999999999999998653
No 196
>1vek_A UBP14, ubiquitin-specific protease 14, putative; UBA domain, three helix bundle, ubiquitin associated domain, structural genomics; NMR {Arabidopsis thaliana} SCOP: a.5.2.1
Probab=87.37 E-value=0.66 Score=34.84 Aligned_cols=40 Identities=10% Similarity=0.139 Sum_probs=34.9
Q ss_pred hHHHHHHHHhhhCCCHHHHHHHHHhC-CCChHHHHHhhcCCC
Q psy9055 8 QKDKVKRFISFTQTGELTAINCLSQN-DWKLDLASDNYFQNP 48 (284)
Q Consensus 8 ~~~~i~qF~~iT~~s~~~A~~~L~~~-~w~l~~A~~~fy~~~ 48 (284)
..+.|++.+++ |-++..|++.|..+ |||++.|++-.|...
T Consensus 29 ~e~~v~~L~~M-GF~~~~a~~AL~~t~n~n~e~A~ewL~~h~ 69 (84)
T 1vek_A 29 NEEIVAQLVSM-GFSQLHCQKAAINTSNAGVEEAMNWLLSHM 69 (84)
T ss_dssp CHHHHHHHHHH-TCCHHHHHHHHHHTTTCCHHHHHHHHHHHT
T ss_pred CHHHHHHHHHc-CCCHHHHHHHHHHHcCCCHHHHHHHHHhCC
Confidence 46789999995 99999999999988 499999999888653
No 197
>3fia_A Intersectin-1; EH 1 domain, NESG, structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 1.45A {Homo sapiens} PDB: 2khn_A
Probab=87.10 E-value=0.85 Score=36.53 Aligned_cols=67 Identities=15% Similarity=0.133 Sum_probs=51.0
Q ss_pred ccHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHH-hhcccccccccHHHHHHHHHHhCC
Q psy9055 59 VDRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAW-RFKAAAQCEFSRDEFMNGMLELGC 130 (284)
Q Consensus 59 ~~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~-~l~a~~~g~~tr~eF~~g~~~l~~ 130 (284)
..++++.++|+.+. + ..+.|+.+-+..++...|++.+.+ -=.| ..-...-|.++++||+.+|.-+.+
T Consensus 30 ee~~~y~~iF~~lD-~-~dG~Isg~elr~~~~~sgLp~~~L---~~Iw~laD~d~dG~Ld~~EF~~aM~Li~~ 97 (121)
T 3fia_A 30 EERAKHDQQFHSLK-P-ISGFITGDQARNFFFQSGLPQPVL---AQIWALADMNNDGRMDQVEFSIAMKLIKL 97 (121)
T ss_dssp HHHHHHHHHHHHTC-C-BTTBEEHHHHHHHHGGGCCCHHHH---HHHHHHHCTTCSSEECHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhC-C-CCCeECHHHHHHHHHHcCCCHHHH---HHHHHHHcCCCCCcCCHHHHHHHHHHHHH
Confidence 35678999999994 4 457899999999999999975543 2223 334566799999999999988643
No 198
>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1}
Probab=87.03 E-value=0.73 Score=38.23 Aligned_cols=67 Identities=16% Similarity=0.115 Sum_probs=46.9
Q ss_pred cHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHc--CCCCCchHHHHHHHhhcccccccccHHHHHHHHHH
Q psy9055 60 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDL--SLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE 127 (284)
Q Consensus 60 ~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edL--gv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~ 127 (284)
....+..+|..| |.++.+.|+.+-+.+++..+ |..+.+..+-.+...+....-|.|+.+||+.-|++
T Consensus 127 ~~~~l~~~F~~~-D~d~~G~Is~~El~~~l~~~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~ 195 (197)
T 3pm8_A 127 KKEVCLIPFKFF-DIDGNGKISVEELKRIFGRDDIENPLIDKAIDSLLQEVDLNGDGEIDFHEFMLMMSK 195 (197)
T ss_dssp SHHHHHHHHHHH-CTTCSSEECHHHHHHHHC----CCHHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHHC
T ss_pred hHHHHHHHHHHH-CCCCCCCCCHHHHHHHHHhcccCCCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHc
Confidence 456788888888 44455789999999999888 55554444444555566667789999999987764
No 199
>1snl_A Nucleobindin 1, calnuc; EF-hand, calcium-binding, metal binding protein; NMR {Homo sapiens} SCOP: a.39.1.7
Probab=86.93 E-value=1.8 Score=32.06 Aligned_cols=64 Identities=6% Similarity=0.079 Sum_probs=46.0
Q ss_pred HHHHHHHHhcCCCCCCccCHHHHHHHHHH-----cCCCCCch-----------HHHHHHHhhcccccccccHHHHHHHHH
Q psy9055 63 KLESLYSKYKDASEPDKILVEGIMKFLDD-----LSLSPESK-----------LVLIIAWRFKAAAQCEFSRDEFMNGML 126 (284)
Q Consensus 63 ~l~~lFd~Y~d~~~~~~I~~dG~~~~~ed-----Lgv~ped~-----------~~LvLa~~l~a~~~g~~tr~eF~~g~~ 126 (284)
.+..+|..| |.+..+.|+.+=+..++.. +|..+... .+--+.-.+....-|.||.+||+..+.
T Consensus 21 ~~~~~F~~~-D~d~dG~I~~~El~~~l~~~~~~~~g~~~~~~~~~~~~e~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~ 99 (103)
T 1snl_A 21 NPKTFFILH-DINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNVDTNQDRLVTLEEFLASTQ 99 (103)
T ss_dssp CHHHHHHHH-CSSCCSEEEHHHHHHHHHHHHHTTSCCSSCSSHHHHTTHHHHHHHHHHHHHTCSSCSSEEEHHHHHHHHH
T ss_pred CHHHHHHHH-cCCCCCcccHHHHHHHHHHHHHHHhccCCCCccHHHHHHHHHHHHHHHHHHcCCCCCCcCCHHHHHHHHh
Confidence 477788888 4445578999999999986 68776542 122233455566789999999999876
Q ss_pred H
Q psy9055 127 E 127 (284)
Q Consensus 127 ~ 127 (284)
+
T Consensus 100 ~ 100 (103)
T 1snl_A 100 R 100 (103)
T ss_dssp C
T ss_pred c
Confidence 4
No 200
>3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A
Probab=86.84 E-value=6 Score=38.21 Aligned_cols=66 Identities=12% Similarity=0.166 Sum_probs=54.7
Q ss_pred HHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHh
Q psy9055 62 KKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 62 ~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 128 (284)
+.+.++|..+- .+..+.|+.+-+.+++..+|..+....+-.|...+....-|.|+.+||+..|..+
T Consensus 312 ~el~~~F~~fD-~D~dG~Is~~EL~~~L~~lg~~~s~eel~~Lf~~~D~DgdG~IsfeEFl~ll~~~ 377 (450)
T 3sg6_A 312 AEFKEAFSLFD-KDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARK 377 (450)
T ss_dssp HHHHHHHHHHC-TTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHTTCTTSSSSEEHHHHHHHHHC-
T ss_pred HHHHHHHHHHC-CCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCcccHHHHHHHHHhh
Confidence 57888999983 3344789999999999999999987777677777777778999999999998763
No 201
>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5
Probab=86.82 E-value=2 Score=36.46 Aligned_cols=71 Identities=13% Similarity=0.202 Sum_probs=53.5
Q ss_pred ccHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCC-CCchHHHHHHHhhcccccccccHHHHHHHHHHhC
Q psy9055 59 VDRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLS-PESKLVLIIAWRFKAAAQCEFSRDEFMNGMLELG 129 (284)
Q Consensus 59 ~~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~-ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~ 129 (284)
..++.+..+|+.|...+..+.|+.+-+.+++..+|.. +....+-.+...+....-|.|+.+||+..+..++
T Consensus 48 ~s~~ei~~l~~~Fd~~d~~G~I~~~E~~~~l~~l~~~~~~~~~~~~~f~~~D~d~~G~I~~~Ef~~~l~~~~ 119 (224)
T 1s1e_A 48 FTKRELQVLYRGFKNECPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILL 119 (224)
T ss_dssp CCHHHHHHHHHHHHHHCTTSCBCHHHHHHHHHTTCTTSCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHhcCCCCcHHHHHHHHHHhcCCCCCcEeHHHHHHHHHHHc
Confidence 4667888888877642234789999999999999865 3444444455566777789999999999998865
No 202
>2lvv_A Flagellar calcium-binding protein TB-24; EF-hand, metal binding protein; NMR {Trypanosoma brucei brucei}
Probab=86.79 E-value=1.7 Score=36.79 Aligned_cols=66 Identities=11% Similarity=0.070 Sum_probs=50.9
Q ss_pred HHHHHHHHHHhcCCCCCCccCHHHHHHHHHHc---CCCCCchHHHHHHHhhcccccccccHHHHHHHHHHhC
Q psy9055 61 RKKLESLYSKYKDASEPDKILVEGIMKFLDDL---SLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLELG 129 (284)
Q Consensus 61 ~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edL---gv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~ 129 (284)
...+..+|..| |.+..+.|+.+-+.+++..+ |++++++.. +.-.+....-|.|+.+||+.-+....
T Consensus 132 ~~~l~~~F~~~-D~d~dG~Is~~El~~~l~~~~~~g~~~~e~~~--~~~~~D~d~dG~Is~~EF~~~~~~~~ 200 (226)
T 2lvv_A 132 IFELTVMFDTM-DKDGSLLLELQEFKEALPKLKEWGVDITDATT--VFNEIDTNGSGVVTFDEFSCWAVTKK 200 (226)
T ss_dssp HHHHHHHHHHH-SCSSCCEECHHHHHHHHHHHHHHTCCCCSCHH--HHHHHCCSCSSCEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-cCCCCCeEcHHHHHHHHHHHhhcCCCHHHHHH--HHHHhCCCCCCcEeHHHHHHHHHhcC
Confidence 34788889988 44455799999999999888 999987433 33344556679999999999888743
No 203
>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A
Probab=86.71 E-value=2.2 Score=34.95 Aligned_cols=64 Identities=14% Similarity=0.275 Sum_probs=46.4
Q ss_pred HHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHh
Q psy9055 62 KKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 62 ~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 128 (284)
..+..+|..| |.+..+.|+.+-+.+++..+|..+.+..+-.+...+ ..-|.|+.+||+..+..+
T Consensus 103 ~~~~~~F~~~-D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~l~~~~--d~dg~i~~~eF~~~~~~~ 166 (198)
T 1juo_A 103 NGWRQHFISF-DTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRY--STNGKITFDDYIACCVKL 166 (198)
T ss_dssp HHHHHHHHTT-CTTCCSEECHHHHHHHHHHTTCCCCHHHHHHHHHHT--CSSSSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHh-CCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHh--CCCCeEcHHHHHHHHHHH
Confidence 4566778777 444457899999999999999876655444444444 556889999999988774
No 204
>2wcb_A Protein S100-A12; calcium signalling, HOST-parasite response, metal binding PR; 1.73A {Homo sapiens} PDB: 1odb_A* 2wc8_A 2wcf_A 2wce_A 1e8a_A 1gqm_A
Probab=86.69 E-value=0.93 Score=33.67 Aligned_cols=68 Identities=9% Similarity=0.092 Sum_probs=49.7
Q ss_pred HHHHHHHHHHhcCCCCCC-ccCHHHHHHHHHH-----cCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHh
Q psy9055 61 RKKLESLYSKYKDASEPD-KILVEGIMKFLDD-----LSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 61 ~~~l~~lFd~Y~d~~~~~-~I~~dG~~~~~ed-----Lgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 128 (284)
...|.+.|..|-+.+..+ .|+.+-+.+++.. ||..+....+--+...+....-|.|+-+||+..+..+
T Consensus 11 ~~~l~~~F~~fD~~dg~gg~I~~~El~~~l~~~~~~~lg~~~~~~~v~~~~~~~D~d~dG~I~f~EF~~~~~~~ 84 (95)
T 2wcb_A 11 LEGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDANQDEQVDFQEFISLVAIA 84 (95)
T ss_dssp HHHHHHHHHHHHTSSSSTTEEEHHHHHHHHHHHTHHHHHHCCCHHHHHHHHTTSSSSTTSEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCCCccCHHHHHHHHHHHhhhhccccccHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHH
Confidence 356888999996333334 8999999999976 6766665544444445556678999999999988764
No 205
>3u0k_A Rcamp; fluorescent protein, calcium binding, EF-hand, genetically E calcium indicator; HET: NFA CRK; 2.10A {Entacmaea quadricolor}
Probab=86.48 E-value=1.7 Score=42.12 Aligned_cols=64 Identities=14% Similarity=0.190 Sum_probs=53.8
Q ss_pred HHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHH
Q psy9055 63 KLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE 127 (284)
Q Consensus 63 ~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~ 127 (284)
.|.++|+.| |.+..+.|+.+=+.+.+..||++|.+..+--|...+....-|.|+-+||+..+..
T Consensus 303 ELREaF~~f-DkDgdG~IS~eELk~aLrsLG~~~TeeEI~~Lf~~~D~DgDG~IdFeEFl~lms~ 366 (440)
T 3u0k_A 303 EFKEAFSLF-DKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLIMMAR 366 (440)
T ss_dssp HHHHHHHHH-CTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCSSSEEHHHHHHHHHT
T ss_pred HHHHHHHHH-cCCCCCEECHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 466678877 4455589999999999999999999888877778888888899999999987754
No 206
>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5
Probab=86.38 E-value=1.7 Score=34.30 Aligned_cols=66 Identities=11% Similarity=0.176 Sum_probs=50.6
Q ss_pred cHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHh
Q psy9055 60 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 60 ~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 128 (284)
....+..+|..| |.+..+.|+.+-+.+++..+|++.+.+..+. ..+-...-|.|+.+||+..+...
T Consensus 103 ~~~~~~~~F~~~-D~d~dG~Is~~E~~~~l~~~g~~~~~~~~~~--~~~D~d~dG~i~~~ef~~~~~~~ 168 (185)
T 2sas_A 103 CQNRIPFLFKGM-DVSGDGIVDLEEFQNYCKNFQLQCADVPAVY--NVITDGGKVTFDLNRYKELYYRL 168 (185)
T ss_dssp HHHHHHHHHHHH-CTTSSSCCCHHHHHHHTTSSCCCCSSHHHHH--HHHHTTTTSCCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-cCCCCCeEcHHHHHHHHHHhCCCHHHHHHHH--HHhcCCCCCcCcHHHHHHHHHHH
Confidence 346788899988 4444578999999999999998877654433 33445567999999999998875
No 207
>4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A*
Probab=86.14 E-value=3.8 Score=30.35 Aligned_cols=67 Identities=12% Similarity=0.117 Sum_probs=47.7
Q ss_pred HHHHHHHHHhcCCCC-CCccCHHHHHHHHHH-cC----CCCCchHHHHHHHhhcccccccccHHHHHHHHHHh
Q psy9055 62 KKLESLYSKYKDASE-PDKILVEGIMKFLDD-LS----LSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 62 ~~l~~lFd~Y~d~~~-~~~I~~dG~~~~~ed-Lg----v~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 128 (284)
..|.+.|..|.+.++ .+.|+.+-+.+++.. || -.+.+-.+=-+-..+-...-|.|+-+||+..+..+
T Consensus 10 ~~l~~~F~~fd~~dg~~G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~~~~~ 82 (93)
T 4eto_A 10 DVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSCI 82 (93)
T ss_dssp HHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGGC---CCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHcccCCCCCeECHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHH
Confidence 578889999963333 369999999999985 76 22333344444445566678999999999988875
No 208
>2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae}
Probab=86.06 E-value=1.2 Score=36.58 Aligned_cols=65 Identities=15% Similarity=0.240 Sum_probs=54.9
Q ss_pred HHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHH
Q psy9055 62 KKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE 127 (284)
Q Consensus 62 ~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~ 127 (284)
+.|.+.|+.| |.+..+.|+.+-+...+..||++|....+--+...+....-|.++-++|+..+..
T Consensus 11 ~elk~~F~~~-D~d~dG~I~~~El~~~l~~lg~~~~~~~~~~~~~~~d~d~~~~i~~~ef~~~~~~ 75 (176)
T 2lhi_A 11 AEFKEAFALF-DKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSR 75 (176)
T ss_dssp GHHHHHHHTT-CSSCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTTCSSCSSSBCTTHHHHHHTS
T ss_pred HHHHHHHHHH-CCCCCCCCCHHHHHHHHHHcCCChhHHHHHHHHHHhCcCCCccchHHHHHHHHHH
Confidence 4688889988 4445579999999999999999999888877777788888899999999987654
No 209
>2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens}
Probab=85.92 E-value=1.7 Score=35.82 Aligned_cols=64 Identities=13% Similarity=0.288 Sum_probs=49.8
Q ss_pred HHHHHHHHHhcCCCCCCccCHHHHHHHHHHc----CCCCCchHHHHHHHhhcccccccccHHHHHHHHHHh
Q psy9055 62 KKLESLYSKYKDASEPDKILVEGIMKFLDDL----SLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 62 ~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edL----gv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 128 (284)
..+...|..| | +..+.|+.+-+.+.+..+ |..+.+..+=.+...+. ..-|.|+.+||+.-+..+
T Consensus 76 ~~l~~aF~~f-D-d~~G~I~~~El~~~l~~l~~~~G~~~~~~~~~~l~~~~d-d~dG~I~~~EF~~~~~~~ 143 (174)
T 2i7a_A 76 VHYQHVFQKV-Q-TSPGVLLSSDLWKAIENTDFLRGIFISRELLHLVTLRYS-DSVGRVSFPSLVCFLMRL 143 (174)
T ss_dssp HHHHHHHHHH-C-SBTTBEEGGGHHHHHHTCGGGTTCCCCHHHHHHHHHHHS-CTTSEECHHHHHHHHHHH
T ss_pred HHHHHHHHHh-c-CCCCcCCHHHHHHHHHHhHhccCCCCCHHHHHHHHHHHc-CCCCeEcHHHHHHHHHHH
Confidence 5677889988 4 556789999999999999 98877655544444455 567999999999988763
No 210
>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5
Probab=85.85 E-value=2 Score=34.53 Aligned_cols=73 Identities=10% Similarity=0.159 Sum_probs=54.7
Q ss_pred ccHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCch-HHHHHHHhhcccccccccHHHHHHHHHHhCCC
Q psy9055 59 VDRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESK-LVLIIAWRFKAAAQCEFSRDEFMNGMLELGCD 131 (284)
Q Consensus 59 ~~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~-~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~~ 131 (284)
..++.+..+|..|...+..+.|+.+-+.+++..+|..+..- .+--+...+-...-|.|+.+||+..+..++..
T Consensus 22 ~~~~~i~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~~ 95 (193)
T 1bjf_A 22 FTEHEIQEWYKGFLRDCPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFIIALSVTSRG 95 (193)
T ss_dssp CCHHHHHHHHHHHHHHSTTSEEEHHHHHHHHTTTSSSSCCHHHHHHHHHHHCSSCSSEEEHHHHHHHHHHHTSS
T ss_pred CCHHHHHHHHHHHHHHCCCCCcCHHHHHHHHHHhcCcCChHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHcCC
Confidence 45678889999886421246899999999999999876432 23334455666778999999999999987643
No 211
>2lbc_A Ubiquitin carboxyl-terminal hydrolase 13; tandem UBA of USP13; NMR {Homo sapiens}
Probab=85.20 E-value=1 Score=35.83 Aligned_cols=40 Identities=25% Similarity=0.267 Sum_probs=36.1
Q ss_pred hHHHHHHHHhhhCCCHHHHHHHHHhCCCChHHHHHhhcCCC
Q psy9055 8 QKDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQNP 48 (284)
Q Consensus 8 ~~~~i~qF~~iT~~s~~~A~~~L~~~~w~l~~A~~~fy~~~ 48 (284)
..+.|++.+++ |.++..|++.|..++||++.|++-.+..+
T Consensus 78 ~e~~v~~L~~M-GF~~~~a~~AL~~~~~~~e~A~e~L~~~~ 117 (126)
T 2lbc_A 78 PEEIVAIITSM-GFQRNQAIQALRATNNNLERALDWIFSHP 117 (126)
T ss_dssp CHHHHHHHHHH-TSCHHHHHHHHHHHTSCHHHHHHHHHTCC
T ss_pred CHHHHHHHHHc-CCCHHHHHHHHHHcCCCHHHHHHHHHhCC
Confidence 45789999995 99999999999999999999999988765
No 212
>2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A
Probab=85.11 E-value=2.6 Score=35.51 Aligned_cols=66 Identities=17% Similarity=0.179 Sum_probs=49.0
Q ss_pred HHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcC-------CCCCchHHHH--HHHhhcccccccccHHHHHHHHHH
Q psy9055 61 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLS-------LSPESKLVLI--IAWRFKAAAQCEFSRDEFMNGMLE 127 (284)
Q Consensus 61 ~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLg-------v~ped~~~Lv--La~~l~a~~~g~~tr~eF~~g~~~ 127 (284)
...+..+|..| |.+..+.|+.+-+.+++..+| ++++.+..++ +...+....-|.|+.+||+..+..
T Consensus 128 ~~~l~~~F~~~-D~d~dG~Is~~El~~~l~~~~~~~~~~~~s~~e~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~~ 202 (214)
T 2l4h_A 128 DIKSHYAFRIF-DFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVISR 202 (214)
T ss_dssp HHHHHHHHHHH-CTTCSSCBCHHHHHHHHHHHHHSSSCTTCSCTHHHHHHHHHHHHHCCSCCSSBCSHHHHHHHHT
T ss_pred HHHHHHHHHHh-CCCCCCcCCHHHHHHHHHHHhccccCCCCCHHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHh
Confidence 45888999988 444557899999999999885 4455544332 444555666799999999998875
No 213
>1otr_A Protein CUE2; protein-protein complex, cell cycle; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.4
Probab=84.95 E-value=1.7 Score=29.41 Aligned_cols=41 Identities=15% Similarity=0.182 Sum_probs=34.3
Q ss_pred chHHHHHHHHhhh-CCCHHHHHHHHHhCCCChHHHHHhhcCC
Q psy9055 7 SQKDKVKRFISFT-QTGELTAINCLSQNDWKLDLASDNYFQN 47 (284)
Q Consensus 7 ~~~~~i~qF~~iT-~~s~~~A~~~L~~~~w~l~~A~~~fy~~ 47 (284)
+..+.+++.+++. +++..+++..|+++++|++.|++...+.
T Consensus 3 ~~e~~v~~L~EMFP~~~~~~ik~~L~~~~Gd~d~Ai~~LL~~ 44 (49)
T 1otr_A 3 DHESKLSILMDMFPAISKSKLQVHLLENNNDLDLTIGLLLKE 44 (49)
T ss_dssp SHHHHHHHHHHHCSSSCHHHHHHHHHHTTTCSHHHHHHHHHH
T ss_pred hhHHHHHHHHHHCCCCCHHHHHHHHHHcCCCHHHHHHHHHhc
Confidence 3457788888885 5688999999999999999999987643
No 214
>1tr8_A Conserved protein (MTH177); chaperones, nascent polypeptide-associated complex, ribosome domain, ubiquitin, chaperone; 2.27A {Methanothermobacter marburgensis}
Probab=84.84 E-value=1.2 Score=34.69 Aligned_cols=34 Identities=18% Similarity=0.135 Sum_probs=30.8
Q ss_pred HHHHHHHHhhhCCCHHHHHHHHHhCCCChHHHHH
Q psy9055 9 KDKVKRFISFTQTGELTAINCLSQNDWKLDLASD 42 (284)
Q Consensus 9 ~~~i~qF~~iT~~s~~~A~~~L~~~~w~l~~A~~ 42 (284)
.+.|.--|+=||+|.+.|++.|+.+++|+-.|+-
T Consensus 66 ~edi~lv~~q~~vs~~~A~~aL~~~~gDiv~Ai~ 99 (102)
T 1tr8_A 66 EDDIELVMNQTGASREDATRALQETGGDLAEAIM 99 (102)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHTTTCHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHcCCCHHHHHH
Confidence 4568888999999999999999999999999974
No 215
>1xk4_C Calgranulin B; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1irj_A*
Probab=84.80 E-value=4.3 Score=30.88 Aligned_cols=67 Identities=16% Similarity=0.184 Sum_probs=49.0
Q ss_pred HHHHHHHHHhcCCCCCC-ccCHHHHHHHHH-HcCCC---C--CchHHHHHHHhhcccccccccHHHHHHHHHHh
Q psy9055 62 KKLESLYSKYKDASEPD-KILVEGIMKFLD-DLSLS---P--ESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 62 ~~l~~lFd~Y~d~~~~~-~I~~dG~~~~~e-dLgv~---p--ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 128 (284)
..|...|..|-..+..+ .|+.+-+.+++. .||.. | ....+-.+...+....-|.|+-+||+..+..+
T Consensus 12 ~~l~~~F~~fD~~dgdG~~Is~~El~~~l~~~lg~~~~~~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~~ 85 (113)
T 1xk4_C 12 ETIINTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFIMLMARL 85 (113)
T ss_dssp HHHHHHHHHHHTTSSSTTSBCHHHHHHHHHHHTTTTTTTGGGCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhhcccccCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHHH
Confidence 56788899996423445 899999999998 88853 2 33333344455666678999999999998875
No 216
>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus}
Probab=84.78 E-value=7.5 Score=31.43 Aligned_cols=67 Identities=10% Similarity=0.081 Sum_probs=48.4
Q ss_pred HHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHhC
Q psy9055 62 KKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLELG 129 (284)
Q Consensus 62 ~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~ 129 (284)
..+..+|..+- .+..+.|+.+-+..++..++..+..-.+-.+-..+-...-|.|+++||...+..++
T Consensus 52 ~~~~~~f~~~D-~d~~G~I~~~Ef~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~Ef~~~~~~~~ 118 (198)
T 2r2i_A 52 KYVEQMFETFD-FNKDGYIDFMEYVAALSLVLKGKVDQKLRWYFKLYDVDGNGCIDRGELLNIIKAIR 118 (198)
T ss_dssp HHHHHHHHHHC-TTCSSCEEHHHHHHHHHHHSSCCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHTT
T ss_pred HHHHHHHHHHC-CCCCCeEcHHHHHHHHHHHccCchHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHH
Confidence 45888888874 34446799999999998888766444443444455666778999999999888764
No 217
>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana}
Probab=84.22 E-value=0.96 Score=35.44 Aligned_cols=63 Identities=11% Similarity=0.179 Sum_probs=36.9
Q ss_pred HHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHH
Q psy9055 62 KKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE 127 (284)
Q Consensus 62 ~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~ 127 (284)
..+..+|..| |.+..+.|+.+-+.+++..+|++++.+..++ ..+....-|.|+.+||+..+..
T Consensus 99 ~~~~~~F~~~-D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~--~~~d~~~dg~i~~~eF~~~~~~ 161 (166)
T 2aao_A 99 DHLFAAFTYF-DKDGSGYITPDELQQACEEFGVEDVRIEELM--RDVDQDNDGRIDYNEFVAMMQK 161 (166)
T ss_dssp HHHHHHHHHH-CTTCSSSBCHHHHHHHTCC--------CCHH--HHHCTTCSSSBCHHHHHHHHC-
T ss_pred HHHHHHHHHh-CCCCCCcCcHHHHHHHHHHcCCCHHHHHHHH--HHhCCCCCCcEeHHHHHHHHHh
Confidence 5677778777 4444467888888888888887765543322 3344455688888888887655
No 218
>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5
Probab=84.09 E-value=4.8 Score=32.79 Aligned_cols=69 Identities=7% Similarity=0.068 Sum_probs=54.4
Q ss_pred ccHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHh
Q psy9055 59 VDRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 59 ~~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 128 (284)
.....+..+|..+- .+..+.|+.+-+..++..++..+..-.+-.+-..+-...-|.|+++||...+..+
T Consensus 56 ~~~~~~~~~f~~~D-~d~~G~i~~~Ef~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~~~ 124 (204)
T 1jba_A 56 EATQYVEAMFRAFD-TNGDNTIDFLEYVAALNLVLRGTLEHKLKWTFKIYDKDRNGCIDRQELLDIVESI 124 (204)
T ss_dssp TTHHHHHHHHHHHC-CSSSSEECHHHHHHHHHHHSSCCCTHHHHHHHHHHCSSCSSCBCHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHc-CCCCCeEeHHHHHHHHHHHccCCHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 45678889999984 3444789999999999999877665555555556677778999999999998876
No 219
>2lvv_A Flagellar calcium-binding protein TB-24; EF-hand, metal binding protein; NMR {Trypanosoma brucei brucei}
Probab=83.96 E-value=5.1 Score=33.76 Aligned_cols=64 Identities=16% Similarity=0.143 Sum_probs=44.1
Q ss_pred HHHHHHHHHHhcCCCCCCccCHHHHHH-HHHHcCCCCCchHHHHHHHhh---------cccccccccHHHHHHHH
Q psy9055 61 RKKLESLYSKYKDASEPDKILVEGIMK-FLDDLSLSPESKLVLIIAWRF---------KAAAQCEFSRDEFMNGM 125 (284)
Q Consensus 61 ~~~l~~lFd~Y~d~~~~~~I~~dG~~~-~~edLgv~ped~~~LvLa~~l---------~a~~~g~~tr~eF~~g~ 125 (284)
...|.++|..|- .+..+.|+.+-+.+ +...+|+++....+-.+...+ ....-|.|+.+||+..+
T Consensus 50 ~~~l~~~F~~~D-~d~dG~Is~~El~~~l~~~lg~~~~~~~~~~~~~~~f~~~~~~~~D~d~~G~I~~~EF~~~~ 123 (226)
T 2lvv_A 50 KSRRIELFKQFD-TNGTGKLGFREVLDGCYGILKLDEFTTHLPDIVQRAFDKAKDLGNKVKGVGEEDLVEFLEFR 123 (226)
T ss_dssp HHHHHHHHHHHG-GGSCSCBCSHHHHHHHHHTTCCTTTSSSCHHHHHHHHHHHHHHHHHHSCCCCCSCBCHHHHH
T ss_pred HHHHHHHHHHHC-CCCCCcCcHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhcccCCCCCCCCcCCHHHHHHHH
Confidence 457888898883 33447899999998 778889886543332222222 45567899999999854
No 220
>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A
Probab=83.79 E-value=3.2 Score=35.20 Aligned_cols=67 Identities=15% Similarity=0.228 Sum_probs=47.2
Q ss_pred cHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHc------------CCCCCchHHHHHHHhhcccccccccHHHHHHHHHH
Q psy9055 60 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDL------------SLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE 127 (284)
Q Consensus 60 ~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edL------------gv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~ 127 (284)
....+..+|..| |.++.+.|+.+-+.+++..+ |.......+-.+...+....-|.||.+||++.++.
T Consensus 136 ~~~~l~~~F~~~-D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~Is~~EF~~~~~~ 214 (229)
T 3dd4_A 136 VQEKLNWAFNLY-DINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGVVTIDEFIESCQK 214 (229)
T ss_dssp HHHHHHHHHHHH-CTTCSSCCBHHHHHHHHHHHHHHCC-----------CCTHHHHHHHHHCSSCSSBCCHHHHHHHHHT
T ss_pred hHHHHHHHHHHh-CCCCCCeECHHHHHHHHHHHHHHhccccCCCcchhhHHHHHHHHHHHhcCCCCCcEeHHHHHHHHHh
Confidence 346788889888 44455789999999999887 33433344444455666677899999999998875
No 221
>3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens}
Probab=83.77 E-value=6 Score=30.10 Aligned_cols=68 Identities=12% Similarity=0.134 Sum_probs=49.4
Q ss_pred HHHHHHHHHhcCCCC-CCccCHHHHHHHHHH-cC----CCCCchHHHHHHHhhcccccccccHHHHHHHHHHhC
Q psy9055 62 KKLESLYSKYKDASE-PDKILVEGIMKFLDD-LS----LSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLELG 129 (284)
Q Consensus 62 ~~l~~lFd~Y~d~~~-~~~I~~dG~~~~~ed-Lg----v~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~ 129 (284)
..|.+.|..|-+.++ .+.|+.+-+.+++.. || -.+.+..+--+-..+-...-|.|+-+||+..+..+-
T Consensus 13 ~~l~~aF~~fD~~dgd~G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~dgDG~Idf~EF~~~m~~~~ 86 (104)
T 3zwh_A 13 DVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSWLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSSIA 86 (104)
T ss_dssp HHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGGSCSSCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCCCCeECHHHHHHHHHHHcchhccCCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHHH
Confidence 567788999964333 358999999999985 66 333444444455556667789999999999888754
No 222
>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens}
Probab=83.67 E-value=1.3 Score=36.27 Aligned_cols=64 Identities=11% Similarity=0.095 Sum_probs=49.2
Q ss_pred HHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHhC
Q psy9055 61 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLELG 129 (284)
Q Consensus 61 ~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~ 129 (284)
.+.|.++|..| |.+..+.|+.+-+.++ ..||++|. +-.|...+....-|.|+.+||+..+....
T Consensus 28 ~~~l~~~F~~~-D~d~dG~I~~~El~~~-~~lg~~~~---~~~l~~~~D~d~dg~i~~~EF~~~~~~~~ 91 (202)
T 2bec_A 28 LLRLHHRFRAL-DRNKKGYLSRMDLQQI-GALAVNPL---GDRIIESFFPDGSQRVDFPGFVRVLAHFR 91 (202)
T ss_dssp HHHHHHHHHHH-CSSCSSCCCHHHHHTC-HHHHHSTT---HHHHHHTTSCSSCCCCCHHHHHHHHGGGS
T ss_pred HHHHHHHHHHH-CCCCCCCcCHHHHHHH-HhcCCCcc---HHHHHHHhCCCCCCcCcHHHHHHHHHHhc
Confidence 35677788888 3344578999999999 89999887 33344566667789999999999988754
No 223
>2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A
Probab=83.61 E-value=2.4 Score=33.78 Aligned_cols=57 Identities=14% Similarity=0.178 Sum_probs=44.1
Q ss_pred CCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHhC
Q psy9055 73 DASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLELG 129 (284)
Q Consensus 73 d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~ 129 (284)
|.+..+.|+.+-+.+++..+|....+-.+-.+...+-...-|.|+.+||+..+..+.
T Consensus 112 D~d~~G~I~~~E~~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~i~~~ef~~~~~~~~ 168 (186)
T 2hps_A 112 DTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDEFLVTVNDFL 168 (186)
T ss_dssp CTTCSSEEEHHHHHHHHHHHCTTCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHH
T ss_pred cCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHh
Confidence 666668899999999999999665544444445555666789999999999988753
No 224
>3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L
Probab=83.60 E-value=4.8 Score=40.79 Aligned_cols=66 Identities=12% Similarity=0.103 Sum_probs=54.6
Q ss_pred HHHHHHHHHHhcCCCCCCccCHHHHHHHHHHc--------CCCCCchHHHHHHHhhcccccccccHHHHHHHHHHh
Q psy9055 61 RKKLESLYSKYKDASEPDKILVEGIMKFLDDL--------SLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 61 ~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edL--------gv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 128 (284)
.+.|.++|++|- +..+.|+.+-+.+.+..+ |..+....+-.|...+....-|.|+.+||+..|..+
T Consensus 531 ~~~l~~~F~~~D--d~dG~Is~~El~~~L~~l~~~~~~~~g~~~s~~~~~~l~~~~D~d~~G~I~f~EF~~l~~~~ 604 (714)
T 3bow_A 531 GDGFRRLFAQLA--GEDAEISAFELQTILRRVLAKREDIKSDGFSIETCKIMVDMLDEDGSGKLGLKEFYILWTKI 604 (714)
T ss_dssp CHHHHHHHHHHH--GGGTSBCHHHHHHHHHHHHTTCTTSCCSCCCHHHHHHHHHHHCCSSCSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHc--CCCCcCCHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 467999999997 344789999999999998 777776666666667777788999999999999874
No 225
>1wgl_A TOLL-interacting protein; CUE domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, immune system; NMR {Homo sapiens} SCOP: a.5.2.4
Probab=83.55 E-value=1.4 Score=30.86 Aligned_cols=41 Identities=12% Similarity=0.100 Sum_probs=35.3
Q ss_pred hHHHHHHHHhhh-CCCHHHHHHHHHhCCCChHHHHHhhcCCC
Q psy9055 8 QKDKVKRFISFT-QTGELTAINCLSQNDWKLDLASDNYFQNP 48 (284)
Q Consensus 8 ~~~~i~qF~~iT-~~s~~~A~~~L~~~~w~l~~A~~~fy~~~ 48 (284)
..+.|+++.++- +.+..+.+..|+++++|++.||+...+-.
T Consensus 9 ~ee~l~~L~emFP~ld~~~I~~vL~a~~gdvd~aI~~LL~m~ 50 (59)
T 1wgl_A 9 SEEDLKAIQDMFPNMDQEVIRSVLEAQRGNKDAAINSLLQMG 50 (59)
T ss_dssp CHHHHHHHHHHCSSSCHHHHHHHHTTTTTCHHHHHHHHHHSS
T ss_pred CHHHHHHHHHHCCCCCHHHHHHHHHHcCCCHHHHHHHHHcCc
Confidence 457788888887 66889999999999999999999998653
No 226
>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens}
Probab=83.24 E-value=2.2 Score=34.54 Aligned_cols=69 Identities=12% Similarity=0.138 Sum_probs=48.9
Q ss_pred cHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHc-------CCCCCchHHHHHHHhhcc-cccccccHHHHHHHHHHhC
Q psy9055 60 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDL-------SLSPESKLVLIIAWRFKA-AAQCEFSRDEFMNGMLELG 129 (284)
Q Consensus 60 ~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edL-------gv~ped~~~LvLa~~l~a-~~~g~~tr~eF~~g~~~l~ 129 (284)
....+..+|..| |.+..+.|+.+-+.+++..+ |....+-.+-.+...+.. ..-|.||.+||+..+..++
T Consensus 107 ~~~~~~~~F~~~-D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~dg~Is~~EF~~~~~~~~ 183 (204)
T 3e3r_A 107 REAVIAAAFAKL-DRSGDGVVTVDDLRGVYSGRAHPKVRSGEWTEDEVLRRFLDNFDSSEKDGQVTLAEFQDYYSGVS 183 (204)
T ss_dssp HHHHHHHHHHHH-CTTCSSEECHHHHHHHCCCTTCHHHHTTSSCHHHHHHHHHHHHSCSSCCSCEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-CcCCCCeEeHHHHHHHHccccCCccccCCCChHHHHHHHHHHhhccCCCCcCcHHHHHHHHHHcC
Confidence 345788899988 44455789999999999854 444433334344445555 6779999999999888864
No 227
>3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B
Probab=83.09 E-value=2.4 Score=33.85 Aligned_cols=123 Identities=11% Similarity=0.105 Sum_probs=74.0
Q ss_pred CCCcchHHHHHH-HHhh----hCC-CHHHHHHHHHhCCCChHHH-HHhhcCCCc---cc------hhc-cCCcccHHHHH
Q psy9055 3 KLKSSQKDKVKR-FISF----TQT-GELTAINCLSQNDWKLDLA-SDNYFQNPS---AY------YKE-QKSSVDRKKLE 65 (284)
Q Consensus 3 ~l~~~~~~~i~q-F~~i----T~~-s~~~A~~~L~~~~w~l~~A-~~~fy~~~~---~~------~~~-~~~~~~~~~l~ 65 (284)
+|+..|-+.+++ |..+ .|. +...-...|++-+.+...+ +..+..... .+ ... .........|.
T Consensus 9 ~Lt~~qi~elk~~F~~~D~d~dG~I~~~El~~~l~~lg~~~~~~~~~~~~~~~~~~i~f~ef~~~~~~~~~~~~~~~~l~ 88 (153)
T 3i5g_B 9 KLSQRQMQELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAMLKECPGQLNFTAFLTLFGEKVSGTDPEDALR 88 (153)
T ss_dssp TCCHHHHHHHHHHHHHHCCSTTSCCCHHHHHHHHHHTTSCCCHHHHHHHHHTSSSCCCSHHHHHTTTTTTTTCCCHHHHH
T ss_pred CCCHHHHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHcCCCccHHHHHHHHHhccCCccHHHHHHHHHhhhcccccHHHHH
Confidence 455555555543 3333 243 5566666777666655433 222222211 11 001 11222457899
Q ss_pred HHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHH
Q psy9055 66 SLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE 127 (284)
Q Consensus 66 ~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~ 127 (284)
..|..| |.++.+.|+.+-+.+.+..+|..+.+-.+=-|.-.+... -|.|+-+||++-|..
T Consensus 89 ~aF~~f-D~d~~G~I~~~el~~~l~~~g~~ls~~ei~~~~~~~D~~-dG~I~y~EF~~~m~~ 148 (153)
T 3i5g_B 89 NAFSMF-DEDGQGFIPEDYLKDLLENMGDNFSKEEIKNVWKDAPLK-NKQFNYNKMVDIKGK 148 (153)
T ss_dssp HHHHTT-CSSCSSCCCHHHHHHHHHSSSSCCCHHHHHHHHTTCCEE-TTEECHHHHHHHHHC
T ss_pred HHHhcc-ccCCCCeEeHHHHHHHHHHcCCcCCHHHHHHHHHHhCCC-cCEEcHHHHHHHhcC
Confidence 999998 445568999999999999999887665443333333334 699999999998765
No 228
>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus}
Probab=82.69 E-value=2.3 Score=36.70 Aligned_cols=72 Identities=15% Similarity=0.217 Sum_probs=53.2
Q ss_pred ccHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCC-CCCchHHHHHHHhhcccccccccHHHHHHHHHHhCC
Q psy9055 59 VDRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSL-SPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLELGC 130 (284)
Q Consensus 59 ~~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv-~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~ 130 (284)
..++.|..+|..|...+..+.|+.+-+..++..+|- .+.+..+-.+-..+....-|.|+.+||+..+..++.
T Consensus 88 ~s~~ei~~l~~~fd~~~~~G~I~~~ef~~~l~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~l~~~~~ 160 (256)
T 2jul_A 88 FTKKELQSLYRGFKNECPTGLVDEDTFKLIYSQFFPQGDATTYAHFLFNAFDADGNGAIHFEDFVVGLSILLR 160 (256)
T ss_dssp SCHHHHHHHHHHHHHHCTTSSEEHHHHHHHHHHHCCSSCCHHHHHHHHHHSSCSCCSEECSHHHHHHHHHHHS
T ss_pred CCHHHHHHHHHHHHhhCCCCcCCHHHHHHHHHHHcccCCcHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHhc
Confidence 466788888888875333468999999999999873 333334444555666677899999999999988754
No 229
>2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A
Probab=82.67 E-value=0.31 Score=36.11 Aligned_cols=64 Identities=11% Similarity=0.135 Sum_probs=45.7
Q ss_pred HHHHHHHHHhcCCCCCCccCHHHHHHHHHHc---CCCCCchHHHHHHHhhcccccccccHHHHHHHHH
Q psy9055 62 KKLESLYSKYKDASEPDKILVEGIMKFLDDL---SLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML 126 (284)
Q Consensus 62 ~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edL---gv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~ 126 (284)
..+..+|..| |.+..+.|+.+-+.+++..+ |..+.+..+-.+...+....-|.|+.+||+..++
T Consensus 41 ~~l~~~F~~~-D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~ 107 (108)
T 2kyc_A 41 SQLKEIFRIL-DNDQSGFIEEDELKYFLQRFESGARVLTASETKTFLAAADHDGDGKIGAEEFQEMVQ 107 (108)
T ss_dssp SSHHHHCSSS-CSCCSSCCCGGGTTTSHHHHSSSCCCCCTTTTHHHHTTTCCSSSSCCCSSHHHHHHH
T ss_pred HHHHHHHHHh-CCCCCCeEcHHHHHHHHHHHhhccCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHh
Confidence 4677888887 44455789999999999888 6665544433344455556679999999998764
No 230
>2dna_A Unnamed protein product; ubiquitin associated domain, DSK2 protein, proteasome, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.5.2.1
Probab=81.98 E-value=2.6 Score=30.41 Aligned_cols=41 Identities=7% Similarity=0.007 Sum_probs=33.0
Q ss_pred HHHHHHHHhhhCCCHHHHHHHHHhCCCChHHHHHhhcCCCc
Q psy9055 9 KDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQNPS 49 (284)
Q Consensus 9 ~~~i~qF~~iT~~s~~~A~~~L~~~~w~l~~A~~~fy~~~~ 49 (284)
.+.|++.+++==.++...++.|++++.|++.||+-.|..+.
T Consensus 20 ~~ql~qL~~MGF~d~~an~~AL~at~Gnve~Ave~L~~~~~ 60 (67)
T 2dna_A 20 SKEMECLQAMGFVNYNANLQALIATDGDTNAAIYKLKSSQG 60 (67)
T ss_dssp HHHHHHHHHHTCCCHHHHHHHHHHTTSCHHHHHHHHHHCCS
T ss_pred HHHHHHHHHcCCCcHHHHHHHHHHcCCCHHHHHHHHHhCCC
Confidence 34677887754455666699999999999999999998765
No 231
>3i5g_C Myosin catalytic light chain LC-1, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_C 3i5h_C 3i5i_C
Probab=81.97 E-value=6.4 Score=31.54 Aligned_cols=125 Identities=10% Similarity=0.076 Sum_probs=78.1
Q ss_pred CCCCcchHHHHHH-HHhh------hCC-CHHHHHHHHHhCCCChHH-HHHhhcCCC---ccc---------h---hccCC
Q psy9055 2 HKLKSSQKDKVKR-FISF------TQT-GELTAINCLSQNDWKLDL-ASDNYFQNP---SAY---------Y---KEQKS 57 (284)
Q Consensus 2 ~~l~~~~~~~i~q-F~~i------T~~-s~~~A~~~L~~~~w~l~~-A~~~fy~~~---~~~---------~---~~~~~ 57 (284)
++|+..|-+.+++ |..+ .|. +...-...|++-+.++.. -+..+.... .+. . .....
T Consensus 1 sqLt~eqi~elre~F~~fD~~~d~dG~I~~~El~~~lr~lG~~~t~~el~~~~~~d~~~~g~i~f~eFl~~~~~~~~~~~ 80 (159)
T 3i5g_C 1 SQLTKDEIEEVREVFDLFDFWDGRDGDVDAAKVGDLLRCLGMNPTEAQVHQHGGTKKMGEKAYKLEEILPIYEEMSSKDT 80 (159)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHTTSSSCEEGGGHHHHHHHTTCCCCHHHHHTTTCCSSTTSCEECHHHHHHHHHHHTTCCT
T ss_pred CCCCHHHHHHHHHHHHHHCcCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHcccccCCCcccHHHHHHHHHHhhcccc
Confidence 3577777666653 4332 233 556666777777776533 345544321 111 0 01112
Q ss_pred cccHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcc--cccccccHHHHHHHHHH
Q psy9055 58 SVDRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKA--AAQCEFSRDEFMNGMLE 127 (284)
Q Consensus 58 ~~~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a--~~~g~~tr~eF~~g~~~ 127 (284)
......|.+.|..| |.++.+.|+.+-+.+.+..+|..+.+-.+=.|.-.+.. ..-|.|+-+||++-|..
T Consensus 81 ~~~~~~l~~aF~~f-D~d~~G~I~~~el~~~l~~~g~~ls~~e~~~l~~~~D~~~d~dG~I~~~EF~~~m~~ 151 (159)
T 3i5g_C 81 GTAADEFMEAFKTF-DREGQGLISSAEIRNVLKMLGERITEDQCNDIFTFCDIREDIDGNIKYEDLMKKVMA 151 (159)
T ss_dssp TCCHHHHHHHHHHH-CTTSSSEECHHHHHHHHHHSSSCCCHHHHHHHHHHTTCCCCSSCCEEHHHHHHHHHH
T ss_pred cchHHHHHHHHHHH-hcCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCcCCCCCCeEeHHHHHHHHHC
Confidence 33456788899988 55556899999999999999988776554444333332 44689999999998765
No 232
>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum}
Probab=81.88 E-value=18 Score=28.81 Aligned_cols=66 Identities=20% Similarity=0.188 Sum_probs=43.1
Q ss_pred HHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcc------cccccccHHHHHHHHHH
Q psy9055 61 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKA------AAQCEFSRDEFMNGMLE 127 (284)
Q Consensus 61 ~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a------~~~g~~tr~eF~~g~~~ 127 (284)
...+..+|..| |.+..+.|+.+-+.+++...+++++.+.-++-..-... ..-|.|+.+||++-+..
T Consensus 107 ~~~~~~~F~~~-D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~d~~~d~~~~~~~~G~i~~~eF~~~l~~ 178 (180)
T 3mse_B 107 STFLKAAFNKI-DKDEDGYISKSDIVSLVHDKVLDNNDIDNFFLSVHSIKKGIPREHIINKISFQEFKDYMLS 178 (180)
T ss_dssp -CHHHHHHHHH-CTTCSSCBCHHHHHHHTTTSSCCHHHHHHHHHHHHTC---------CCCBCHHHHHHHHHT
T ss_pred HHHHHHHHHHH-CCCCCCCCCHHHHHHHHcCCCCCHHHHHHHHHHhhhccCcccccccCCeeeHHHHHHHHHh
Confidence 35788889888 44455789999999999866666555544332222211 12289999999987754
No 233
>1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A 1f8h_A 1ff1_A
Probab=81.84 E-value=3 Score=31.95 Aligned_cols=66 Identities=14% Similarity=0.095 Sum_probs=49.1
Q ss_pred cHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHhC
Q psy9055 60 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLELG 129 (284)
Q Consensus 60 ~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~ 129 (284)
....+.++|+.|-. ..+.|+.+-+...+..+|++.+.+.- +-..+....-|.|+.+||+..|..+.
T Consensus 13 e~~~~~~~F~~~D~--~dG~Is~~el~~~l~~~gl~~~el~~--i~~~~D~d~dG~id~~EF~~~m~~~~ 78 (106)
T 1eh2_A 13 DKAKYDAIFDSLSP--VNGFLSGDKVKPVLLNSKLPVDILGR--VWELSDIDHDGMLDRDEFAVAMFLVY 78 (106)
T ss_dssp HHHHHHHHHTTSCC--SSSCCBHHHHHHHHHTTTCCHHHHHH--HHHHHCSSCSSBCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCC--CCCeEcHHHHHHHHHHcCCCHHHHHH--HHHHHcCCCCCcCcHHHHHHHHHHHH
Confidence 34567788888843 45799999999999999976544332 22344556689999999999998764
No 234
>2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae}
Probab=81.74 E-value=2.8 Score=34.30 Aligned_cols=123 Identities=11% Similarity=0.113 Sum_probs=75.6
Q ss_pred CCCcchHHHHH-HHHhh----hCC-CHHHHHHHHHhCCCChHH-HHHhhcC----CCccc---------hhc-cCCcccH
Q psy9055 3 KLKSSQKDKVK-RFISF----TQT-GELTAINCLSQNDWKLDL-ASDNYFQ----NPSAY---------YKE-QKSSVDR 61 (284)
Q Consensus 3 ~l~~~~~~~i~-qF~~i----T~~-s~~~A~~~L~~~~w~l~~-A~~~fy~----~~~~~---------~~~-~~~~~~~ 61 (284)
.|+..|-+.++ -|..+ .|. +...-...|...+.++.. -+...+. ++.+. ... .......
T Consensus 4 ~Lt~eqi~elk~~F~~~D~d~dG~I~~~El~~~l~~lg~~~~~~~~~~~~~~~d~d~~~~i~~~ef~~~~~~~~~~~~~~ 83 (176)
T 2lhi_A 4 NLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQLKSNDSE 83 (176)
T ss_dssp CCCTTGGGHHHHHHHTTCSSCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTTCSSCSSSBCTTHHHHHHTSSCCSSHHH
T ss_pred cCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHcCCChhHHHHHHHHHHhCcCCCccchHHHHHHHHHHhcccCCcH
Confidence 46666655453 34444 233 556666777776665432 2333332 11111 001 1122234
Q ss_pred HHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHH
Q psy9055 62 KKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE 127 (284)
Q Consensus 62 ~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~ 127 (284)
..|...|..| |.++.+.|+.+-+.+.+..+|..+.+-.+=-|...+. ..-|.|+-+||++-|++
T Consensus 84 ~~l~~aF~~f-D~d~~G~I~~~el~~~l~~~g~~~~~~ei~~l~~~~d-d~dG~I~~~EF~~~m~k 147 (176)
T 2lhi_A 84 QELLEAFKVF-DKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREVS-DGSGEINIQQFAALLSK 147 (176)
T ss_dssp HHHHHHHHHH-CSSCSSSBCHHHHHHHHHTTTCCCCHHHHHHHHHHHH-TTSSCBCTTHHHHHHTC
T ss_pred HHHHHHHHHh-CCCCCCcCcHHHHHHHHHHcCcccchHHHHHHHHhhc-CCCCeEeHHHHHHHHHh
Confidence 6788899988 5556689999999999999999887655433333444 55799999999998865
No 235
>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A
Probab=81.68 E-value=3.3 Score=33.13 Aligned_cols=71 Identities=11% Similarity=0.214 Sum_probs=51.0
Q ss_pred ccHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCC-CCCchHHHHHHHhhcccccccccHHHHHHHHHHhC
Q psy9055 59 VDRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSL-SPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLELG 129 (284)
Q Consensus 59 ~~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv-~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~ 129 (284)
..++.+..+|..|...+..+.|+.+-+.+++..++- ......+-.+...+....-|.|+.+||+..+..++
T Consensus 22 ~~~~~i~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~ 93 (190)
T 1g8i_A 22 FTEKEVQQWYKGFIKDCPSGQLDAAGFQKIYKQFFPFGDPTKFATFVFNVFDENKDGRIEFSEFIQALSVTS 93 (190)
T ss_dssp SCHHHHHHHHHHHHHHCTTSEEEHHHHHHHHHHHCTTSCTHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCCChHHHHHHHHHHHhcCCCCeEeHHHHHHHHHHhc
Confidence 456788889888864323468999999999998821 22223333445556667789999999999998865
No 236
>2cp8_A NEXT to BRCA1 gene 1 protein; UBA domain, structural genomics, human, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=81.61 E-value=2.4 Score=29.36 Aligned_cols=38 Identities=5% Similarity=0.111 Sum_probs=33.2
Q ss_pred HHHHHHhhhCCCHHHHHHHHHhCCCChHHHHHhhcCCC
Q psy9055 11 KVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQNP 48 (284)
Q Consensus 11 ~i~qF~~iT~~s~~~A~~~L~~~~w~l~~A~~~fy~~~ 48 (284)
+++++.++==++...-++.|++++||++.||+.-...+
T Consensus 12 ~L~~L~eMGF~D~~~N~~aL~~~~gnv~~aI~~Ll~~~ 49 (54)
T 2cp8_A 12 LMAHLFEMGFCDRQLNLRLLKKHNYNILQVVTELLQLS 49 (54)
T ss_dssp HHHHHHHHTCCCHHHHHHHHTTTTTCHHHHHHHHHHHS
T ss_pred HHHHHHHcCCCcHHHHHHHHHHcCCCHHHHHHHHHhcc
Confidence 68889888777899999999999999999999877543
No 237
>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A
Probab=81.31 E-value=4.1 Score=36.96 Aligned_cols=63 Identities=10% Similarity=0.035 Sum_probs=48.5
Q ss_pred HHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHH
Q psy9055 62 KKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGM 125 (284)
Q Consensus 62 ~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~ 125 (284)
..|..+|..+ |.+..+.|+.+-+...+..||+.+....+-.|...+....-|.|+-.+|+..+
T Consensus 122 ~~l~~~F~~~-D~d~dG~Is~~El~~~L~~lg~~~~~~~i~~l~~~~D~d~~G~I~f~ef~~l~ 184 (323)
T 1ij5_A 122 NILRQLFLSS-AVSGSGKFSFQDLKQVLAKYADTIPEGPLKKLFVMVENDTKGRMSYITLVAVA 184 (323)
T ss_dssp HHHHHHHTSS-SSTTSSCCCHHHHHHHHHHHHTTSCSSHHHHHHHHHHHCCSSTHHHHHHTTSH
T ss_pred HHHHHHHHHH-hCCCCCCCcHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcCcHHHHHhhh
Confidence 4566667666 44455789999999999999999887777666666777777999998888643
No 238
>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A
Probab=81.30 E-value=4.2 Score=34.33 Aligned_cols=67 Identities=15% Similarity=0.214 Sum_probs=50.2
Q ss_pred cccHHHHHHHHHHhcCCCCCCccCHHHHHHHHH----HcCC--CCCchHHHHHH----HhhcccccccccHHHHHHHH
Q psy9055 58 SVDRKKLESLYSKYKDASEPDKILVEGIMKFLD----DLSL--SPESKLVLIIA----WRFKAAAQCEFSRDEFMNGM 125 (284)
Q Consensus 58 ~~~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~e----dLgv--~ped~~~LvLa----~~l~a~~~g~~tr~eF~~g~ 125 (284)
....+.|..+|..|- .+..+.|+.+-+.+.+. .||+ .|....+--+. ..+....-|.|+.+||+..+
T Consensus 7 ~~~~~~l~~~F~~~D-~d~~G~i~~~El~~~l~~~~~~lg~~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~ 83 (272)
T 2be4_A 7 NLDAAGFLQIWQHFD-ADDNGYIEGKELDDFFRHMLKKLQPKDKITDERVQQIKKSFMSAYDATFDGRLQIEELANMI 83 (272)
T ss_dssp CCCHHHHHHHHHHHC-TTCCSEEEGGGHHHHHHHHHHHHSTTSCCCHHHHHHHHHHHSCHHHHTCCSEEEHHHHHHHH
T ss_pred hcCHHHHHHHHHHhc-CCCCCCcCHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEeHHHHHHHH
Confidence 346788999999994 44557899999999998 9999 77654433222 24445667999999999993
No 239
>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A
Probab=81.23 E-value=2 Score=31.81 Aligned_cols=59 Identities=17% Similarity=0.232 Sum_probs=34.5
Q ss_pred HHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHH
Q psy9055 61 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNG 124 (284)
Q Consensus 61 ~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g 124 (284)
+..+..+|..|- .+..+.|+.+-+.+++..+|..+ +-.+...+....-|.|+.+||++-
T Consensus 74 ~~~~~~~f~~~D-~d~~G~i~~~e~~~~l~~~~~~~----~~~~~~~~D~~~dg~i~~~ef~~~ 132 (134)
T 1jfj_A 74 KIGLKVLYKLMD-VDGDGKLTKEEVTSFFKKHGIEK----VAEQVMKADANGDGYITLEEFLEF 132 (134)
T ss_dssp HHHHHHHHHHHC-CSSSSEEEHHHHHHHHTTTTCHH----HHHHHHHHHCSSSSEEEHHHHHHH
T ss_pred HHHHHHHHHHHC-CCCCCccCHHHHHHHHHHhCHHH----HHHHHHHhCCCCCCcEeHHHHHHH
Confidence 345677777763 23345677777777777766543 222223334455677777777654
No 240
>3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi}
Probab=81.19 E-value=1.9 Score=36.25 Aligned_cols=65 Identities=17% Similarity=0.110 Sum_probs=48.1
Q ss_pred HHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcC---CCCCchHHHHHHHhhcccccccccHHHHHHHHHHh
Q psy9055 61 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLS---LSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 61 ~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLg---v~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 128 (284)
...+..+|..| |.+..+.|+.+-+.+++..+| ++++.+..+ ...+....-|.|+.+||+..+...
T Consensus 129 ~~~l~~~F~~~-D~d~~G~Is~~El~~~l~~~g~~~~~~~e~~~l--~~~~D~d~dG~I~~~EF~~~~~~~ 196 (219)
T 3cs1_A 129 FFELTVMFDEI-DASGNMLVDEEEFKRAVPKLEAWGAKVEDPAAL--FKELDKNGTGSVTFDEFAAWASAV 196 (219)
T ss_dssp HHHHHHHHHTT-CSSSSSEEEHHHHHHHHHHHHHHTCCCSCHHHH--HHHHCTTSSSEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-CCCCCCcCcHHHHHHHHHHhcccCCCHHHHHHH--HHHhCCCCCCcEeHHHHHHHHHHh
Confidence 35688889888 444557899999999998886 555654333 334455567999999999988773
No 241
>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A
Probab=81.04 E-value=3.1 Score=31.77 Aligned_cols=62 Identities=11% Similarity=0.101 Sum_probs=48.9
Q ss_pred HHHHHHHHHhcCCCC-CCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHh
Q psy9055 62 KKLESLYSKYKDASE-PDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 62 ~~l~~lFd~Y~d~~~-~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 128 (284)
..+.++|..|-. +. .+.|+.+-+.+.+..+|++|....+-.+...+... |+.++|+..+...
T Consensus 14 ~~l~~~F~~~D~-d~~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~----i~~~eF~~~~~~~ 76 (146)
T 2qac_A 14 VDESDVRIYFNE-KSSGGKISIDNASYNARKLGLAPSSIDEKKIKELYGDN----LTYEQYLEYLSIC 76 (146)
T ss_dssp SCHHHHHHHHHH-HCBTTBEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCSE----ECHHHHHHHHHHT
T ss_pred HHHHHHHHHhCc-cCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCC----CCHHHHHHHHHHH
Confidence 357788888853 34 47899999999999999999877666666655554 9999999988864
No 242
>1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A
Probab=80.81 E-value=4.3 Score=32.36 Aligned_cols=72 Identities=10% Similarity=0.112 Sum_probs=52.5
Q ss_pred ccHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCC-CchHHHHHHHhhcccccccccHHHHHHHHHHhCC
Q psy9055 59 VDRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSP-ESKLVLIIAWRFKAAAQCEFSRDEFMNGMLELGC 130 (284)
Q Consensus 59 ~~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~p-ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~ 130 (284)
..++.+..+|+.|...+..+.|+.+-+..++..+|... ....+-.+...+....-|.|+.+||+..+..++.
T Consensus 22 ~~~~~i~~~~~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~ef~~~~~~~~~ 94 (190)
T 1fpw_A 22 FDRREIQQWHKGFLRDCPSGQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFIHFEEFITVLSTTSR 94 (190)
T ss_dssp STHHHHHHHHHHHHHHCTTCCEEHHHHHHHHHHHCTTSCCSHHHHHHHHTCCSSCSSEECHHHHHHHHHHHSC
T ss_pred CCHHHHHHHHHHHHHHCCCCcCcHHHHHHHHHHHcCCCCcHHHHHHHHHHHCCCCCCcEeHHHHHHHHHHHcc
Confidence 46678888888885322246899999999999996532 2233333445566677899999999999998764
No 243
>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A
Probab=80.60 E-value=2.6 Score=38.28 Aligned_cols=19 Identities=11% Similarity=0.027 Sum_probs=8.9
Q ss_pred cccccccHHHHHHHH-HHhC
Q psy9055 111 AAQCEFSRDEFMNGM-LELG 129 (284)
Q Consensus 111 ~~~g~~tr~eF~~g~-~~l~ 129 (284)
..-|.||+++|...+ ..+|
T Consensus 265 d~dG~Is~~El~~~l~~~~g 284 (323)
T 1ij5_A 265 DKSGQLSKEEVQKVLEDAHI 284 (323)
T ss_dssp SSCSSEEHHHHHHHHHHTTC
T ss_pred CCCCCccHHHHHHHHHHHcC
Confidence 334455555555554 4443
No 244
>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A
Probab=80.58 E-value=4.3 Score=34.06 Aligned_cols=67 Identities=16% Similarity=0.223 Sum_probs=51.1
Q ss_pred cHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHc----CCCCCchHHHH----HHHhhcccccccccHHHHHHHHHH
Q psy9055 60 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDL----SLSPESKLVLI----IAWRFKAAAQCEFSRDEFMNGMLE 127 (284)
Q Consensus 60 ~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edL----gv~ped~~~Lv----La~~l~a~~~g~~tr~eF~~g~~~ 127 (284)
....+..+|..| |.+..+.|+.+-+.+++..+ |..+.+..+-- +...+....-|.|+.+||+..+..
T Consensus 101 ~~~~l~~~F~~~-D~d~~G~i~~~el~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~~~~ 175 (263)
T 2f33_A 101 SCEEFMKTWRKY-DTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGKLELTEMARLLPV 175 (263)
T ss_dssp CHHHHHHHHTTS-STTTCSSBCHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHTCSSSSSCBCHHHHHHHSCT
T ss_pred HHHHHHHHHHHH-CCCCCCCcCHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHhcCCCCCCeEcHHHHHHHHHH
Confidence 557788999888 44455789999999999988 88877654432 444556667899999999987754
No 245
>2jq6_A EH domain-containing protein 1; metal binding protein; NMR {Homo sapiens} PDB: 2kff_A 2kfg_A 2kfh_A 2ksp_A
Probab=80.11 E-value=3.6 Score=33.39 Aligned_cols=66 Identities=12% Similarity=0.012 Sum_probs=50.6
Q ss_pred cHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHhC
Q psy9055 60 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLELG 129 (284)
Q Consensus 60 ~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~ 129 (284)
....+.++|+.|- +..+.|+.+-+...+..+|++.+.+.- |-..+....-|.|+.+||+..|..+.
T Consensus 49 e~~~l~~~F~~fD--d~dG~Is~~El~~~l~~~gl~~~el~~--I~~~~D~d~dG~Ld~~EF~~am~li~ 114 (139)
T 2jq6_A 49 DKPTYDEIFYTLS--PVNGKITGANAKKEMVKSKLPNTVLGK--IWKLADVDKDGLLDDEEFALANHLIK 114 (139)
T ss_dssp THHHHHHHHHHSC--CSSSEEEHHHHHHHHHHTTCCHHHHHH--HHHHHCSSCCSEEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhC--CCCCeECHHHHHHHHHHhCcCHHHHHH--HHHHhCCCCCCcCcHHHHHHHHHHHH
Confidence 5678999999996 445789999999999999976543322 22234556789999999999998764
No 246
>3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER, golgi, transport, disulfide bond, endopla reticulum, ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A 3lcp_C
Probab=80.03 E-value=1.7 Score=34.41 Aligned_cols=65 Identities=8% Similarity=0.061 Sum_probs=42.2
Q ss_pred cHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcC----------CCCCchHHHH--HHHhhcccccccccHHHHHHHH
Q psy9055 60 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLS----------LSPESKLVLI--IAWRFKAAAQCEFSRDEFMNGM 125 (284)
Q Consensus 60 ~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLg----------v~ped~~~Lv--La~~l~a~~~g~~tr~eF~~g~ 125 (284)
....+..+|..| |.+..+.|+.+-+.+.+..++ ++++.+.-++ +...+....-|.|+.+||+..|
T Consensus 66 ~~~~l~~~F~~~-D~d~dG~I~~~El~~~l~~~~~~~~~~~g~~~s~~e~~~~~~~~f~~~D~d~dG~Is~~EF~~~~ 142 (143)
T 3a4u_B 66 PQELQLHYFKMH-DYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINIIDGVLRDDDKNNDGYIDYAEFAKSL 142 (143)
T ss_dssp HHHHHHHHHHHT-CTTCSSCEEHHHHHHTCC-------------CCHHHHHHHHHHHHHHHCTTCSSEECHHHHHC--
T ss_pred HHHHHHHHHHHh-CCCCCCccCHHHHHHHHHHHHhhhccccCCCCCHHHHHHHHHHHHHHcCCCCCCcEeHHHHHHHH
Confidence 356788899999 555567899999999998884 3333333222 1134455667999999998654
No 247
>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A
Probab=79.99 E-value=5.9 Score=32.27 Aligned_cols=68 Identities=12% Similarity=0.132 Sum_probs=48.9
Q ss_pred cHHHHHHHHHHhcCCCCCCccCHHHHHHHHH----HcCCCCCchHHHHHH----HhhcccccccccHHHHHHHHHHh
Q psy9055 60 DRKKLESLYSKYKDASEPDKILVEGIMKFLD----DLSLSPESKLVLIIA----WRFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 60 ~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~e----dLgv~ped~~~LvLa----~~l~a~~~g~~tr~eF~~g~~~l 128 (284)
....+..+|..| |.+..+.|+.+-+.+++. .+|....+..+-.+. ..+....-|.|+.+||+..+...
T Consensus 109 ~~~~l~~~F~~~-D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~ 184 (207)
T 2ehb_A 109 VHEKVKFAFKLY-DLRQTGFIEREELKEMVVALLHESELVLSEDMIEVMVDKAFVQADRKNDGKIDIDEWKDFVSLN 184 (207)
T ss_dssp HHHHHHHHHHHH-CTTCCSSEEHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHC
T ss_pred HHHHHHHHHHHh-CCCCCCcCcHHHHHHHHHHHHHHcccccCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhC
Confidence 456788999888 444557899999999985 567666544332222 25556678999999999988873
No 248
>1vdl_A Ubiquitin carboxyl-terminal hydrolase 25; UBA domain, mouse cDNA, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: a.5.2.1
Probab=79.40 E-value=1.8 Score=32.02 Aligned_cols=40 Identities=13% Similarity=0.120 Sum_probs=33.5
Q ss_pred HHHHHHHHhhhCCCH-HHHHHHHHhCCCChHHHHHhhcCCC
Q psy9055 9 KDKVKRFISFTQTGE-LTAINCLSQNDWKLDLASDNYFQNP 48 (284)
Q Consensus 9 ~~~i~qF~~iT~~s~-~~A~~~L~~~~w~l~~A~~~fy~~~ 48 (284)
+-.++|..+|||..+ ..-.+.|++++.||..||.-.-+.+
T Consensus 25 q~lLnQLrEITGiqD~~~L~~ALkas~Gdl~~AV~~LT~~~ 65 (80)
T 1vdl_A 25 QTFLNQLREITGINDAQILQQALKDSNGNLELAVAFLTAKN 65 (80)
T ss_dssp HHHHHHHHHHSCCCCHHHHHHHHHHHTSCHHHHHHHHHTTS
T ss_pred HHHHHHHHHHhCCCcHHHHHHHHHhccCCHHHHHHHHhccc
Confidence 346899999999976 6678899999999999998766553
No 249
>2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A
Probab=79.06 E-value=6.4 Score=32.96 Aligned_cols=68 Identities=10% Similarity=0.135 Sum_probs=49.6
Q ss_pred cHHHHHHHHHHhcCCCCCCccCHHHHHHHHH----HcCCCCCchHHHHHH----HhhcccccccccHHHHHHHHHHh
Q psy9055 60 DRKKLESLYSKYKDASEPDKILVEGIMKFLD----DLSLSPESKLVLIIA----WRFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 60 ~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~e----dLgv~ped~~~LvLa----~~l~a~~~g~~tr~eF~~g~~~l 128 (284)
....+..+|..| |.+..+.|+.+-+.+++. .+|..+.+..+-.+. ..+....-|.|+.+||+..+...
T Consensus 120 ~~~~l~~~F~~~-D~d~~G~Is~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~EF~~~~~~~ 195 (226)
T 2zfd_A 120 IDDKIHFSFQLY-DLKQQGFIERQEVKQMVVATLAESGMNLKDTVIEDIIDKTFEEADTKHDGKIDKEEWRSLVLRH 195 (226)
T ss_dssp HHHHHHHHHHHH-CTTSSSSEEHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHCSSCSSEECHHHHHHHHHHS
T ss_pred HHHHHHHHHHHh-CCCCCCcccHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhC
Confidence 456788999888 444557899999999985 678776554332222 25556778999999999988763
No 250
>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A
Probab=78.85 E-value=7.5 Score=31.66 Aligned_cols=66 Identities=12% Similarity=0.118 Sum_probs=41.1
Q ss_pred ccHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHc--CCCCCc--h-HHHHHHHhhcccccccccHHHHHHHH
Q psy9055 59 VDRKKLESLYSKYKDASEPDKILVEGIMKFLDDL--SLSPES--K-LVLIIAWRFKAAAQCEFSRDEFMNGM 125 (284)
Q Consensus 59 ~~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edL--gv~ped--~-~~LvLa~~l~a~~~g~~tr~eF~~g~ 125 (284)
.....+..+|..| |.+..+.|+.+-+.+++... |..+.+ . .+-.+...+....-|.|+.+||++.|
T Consensus 119 ~~~~~l~~~F~~~-D~d~~G~Is~~El~~~l~~~~~~~~l~~~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~ 189 (191)
T 3k21_A 119 LSKKLIYCAFRVF-DVDNDGEITTAELAHILYNGNKKGNITQRDVNRVKRMIRDVDKNNDGKIDFHEFSEMM 189 (191)
T ss_dssp CCHHHHHHHHHHH-STTCSSCBCHHHHHHHHHHSSSCSCCCHHHHHHHHHHHHHHCSSSSSSBCHHHHHHHH
T ss_pred ccHHHHHHHHHHh-CCCCCCcCCHHHHHHHHHhcCCCCCCCHhHHHHHHHHHHHhcCCCCCeECHHHHHHHH
Confidence 3456777778777 33444678888888888773 333322 1 23334445555667888888888755
No 251
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=78.74 E-value=10 Score=35.54 Aligned_cols=67 Identities=9% Similarity=0.081 Sum_probs=45.5
Q ss_pred HHHHHHHHHHhcCCCCCCccCHHHH----HHHHHHcCCCCC-------chHHHHHHHhhcccccccccHHHHHHHHHHh
Q psy9055 61 RKKLESLYSKYKDASEPDKILVEGI----MKFLDDLSLSPE-------SKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 61 ~~~l~~lFd~Y~d~~~~~~I~~dG~----~~~~edLgv~pe-------d~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 128 (284)
.+.+.++|+.+- .+..+.|+.+-+ .+++..+|.+|. ...+--+...+....-|.|+.+||+..+...
T Consensus 334 ~~~l~~~F~~~D-~d~dG~I~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~D~d~~g~i~~~Ef~~~~~~~ 411 (484)
T 3nyv_A 334 TKELTAIFHKMD-KNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAMDR 411 (484)
T ss_dssp HHHHHHHHHHHC-TTCSSEEEHHHHHHHHHHHHC----CGGGCSHHHHHHHHHHHHHHHTCCTTSEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHhC-cCCCceEeHHHHHHHHHHHhhhcccccccccccccHHHHHHHHHHhCCCCCCeEeHHHHHHHHHhc
Confidence 356788888884 444578999988 666677899887 3444445555666778999999999887663
No 252
>3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} SCOP: a.39.1.0 PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A
Probab=78.28 E-value=7.2 Score=29.28 Aligned_cols=70 Identities=16% Similarity=0.049 Sum_probs=48.3
Q ss_pred HHHHHHHHHHhcCCC--CCCccCHHHHHHHHHHcC-CCCCc----hHHHHHHHhhcccccccccHHHHHHHHHHhCC
Q psy9055 61 RKKLESLYSKYKDAS--EPDKILVEGIMKFLDDLS-LSPES----KLVLIIAWRFKAAAQCEFSRDEFMNGMLELGC 130 (284)
Q Consensus 61 ~~~l~~lFd~Y~d~~--~~~~I~~dG~~~~~edLg-v~ped----~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~ 130 (284)
-..|.+.|..|-..+ +.+.|+.+-+..++..++ -.+.+ -.+=-+.-.+-...-|.|+-+||+..|..+..
T Consensus 10 i~~l~~~F~~fD~~~g~~~G~Is~~EL~~~l~~~~~~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~m~~~~~ 86 (100)
T 3nxa_A 10 VIVLVENFYKYVSKYSLVKNKISKSSFREMLQKELNHMLSDTGNRKAADKLIQNLDANHDGRISFDEYWTLIGGITG 86 (100)
T ss_dssp HHHHHHHHHHTSCTTCSCTTCBCHHHHHHHHHHHSTTTTCSSHHHHHHHHHHHHSCCCSSCCBCHHHHHHHHHHHHG
T ss_pred HHHHHHHHHHHcCcCCCCCCeEcHHHHHHHHHHHccccccccccHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHH
Confidence 356888999995433 247999999999998644 33332 12222333455667899999999999988643
No 253
>3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A
Probab=78.14 E-value=4.4 Score=39.21 Aligned_cols=66 Identities=11% Similarity=0.158 Sum_probs=52.4
Q ss_pred cHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHH
Q psy9055 60 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML 126 (284)
Q Consensus 60 ~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~ 126 (284)
....+..+|..| |.+..+.|+.+-+.+++..+|..+.+-.+-.|...+....-|.|+.+||+..|.
T Consensus 383 ~~e~l~~aFk~f-D~D~dG~Is~eELr~~L~~lG~~ls~eei~~Lf~~~D~D~DG~IsfdEFv~~L~ 448 (450)
T 3sg6_A 383 SEEEIREAFRVF-DKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 448 (450)
T ss_dssp CHHHHHHHHHHH-CTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTSSSSEEHHHHHHHHC
T ss_pred hhhHHHHHHHHh-CCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence 446788889888 444557899999999999999888776666666667767789999999998764
No 254
>1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A*
Probab=77.97 E-value=4.9 Score=32.07 Aligned_cols=64 Identities=14% Similarity=0.233 Sum_probs=46.4
Q ss_pred HHHHHHHHHhcCC----CC-C--CccCHHHHHHHHHHcCCCCCchHHHHHHHhhccccccc-ccHHHHHHHHHHhC
Q psy9055 62 KKLESLYSKYKDA----SE-P--DKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCE-FSRDEFMNGMLELG 129 (284)
Q Consensus 62 ~~l~~lFd~Y~d~----~~-~--~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~-~tr~eF~~g~~~l~ 129 (284)
+.+.+.|..+-.. +. . +.|+.+-+.. +..+|.+|..-.++. .+....-|. |+.+||+..+..+.
T Consensus 20 ~~l~~~F~~~D~~~~~~~~~~~~G~i~~~el~~-l~~~g~~~~~~~l~~---~~D~d~~G~~I~~~EF~~~~~~~~ 91 (183)
T 1dgu_A 20 LLAHRRFCELLPQEQRSVESSLRAQVPFEQILS-LPELKANPFKERICR---VFSTSPAKDSLSFEDFLDLLSVFS 91 (183)
T ss_dssp HHHHHHHHHHSCSTTCSSCCCTTTCSCHHHHHT-STTSSSCTTHHHHHH---HHSCSSSSCCCCHHHHHHHHHHHS
T ss_pred HHHHHHHHHhCccccccccccccCcCcHHHHHH-HHhhhcCcHHHHHHH---HhCCCCCCCEecHHHHHHHHHHhc
Confidence 3455566666331 23 4 7899999999 999999987654433 346666799 99999999998754
No 255
>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens}
Probab=77.56 E-value=6.4 Score=32.52 Aligned_cols=68 Identities=6% Similarity=0.165 Sum_probs=51.7
Q ss_pred HHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHhC
Q psy9055 61 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLELG 129 (284)
Q Consensus 61 ~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~ 129 (284)
...+..+|..+- .+..+.|+.+-+..++..++..+..-.+-.+-..+-...-|.|+++||...+..++
T Consensus 56 ~~~~~~~f~~~D-~d~dG~I~~~Ef~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~E~~~~l~~~~ 123 (211)
T 2ggz_A 56 NKHIDQVYNTFD-TNKDGFVDFLEFIAAVNLIMQEKMEQKLKWYFKLYDADGNGSIDKNELLDMFMAVQ 123 (211)
T ss_dssp HHHHHHHHHHHC-TTCSSEEEHHHHHHHHHHHSCSSHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHc-CCCCCeEeHHHHHHHHHHhccCchHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHH
Confidence 345889999884 34457899999999999988766444444444456667789999999999998875
No 256
>2h2k_A Protein S100-A13; calcium binding protein, metal binding protein; 2.00A {Homo sapiens} PDB: 1yur_A 1yus_A 1yut_A 1yuu_A 2egd_A 2k8m_B 2ki4_B* 2ki6_C* 2kot_A* 2l5x_B 2cxj_A
Probab=77.55 E-value=8.8 Score=29.21 Aligned_cols=65 Identities=12% Similarity=0.131 Sum_probs=46.0
Q ss_pred HHHHHHHHHhcCCCC-CCccCHHHHHHHHHH-cCCC-C--CchHHHHHHHhhcccccccccHHHHHHHHHHh
Q psy9055 62 KKLESLYSKYKDASE-PDKILVEGIMKFLDD-LSLS-P--ESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 62 ~~l~~lFd~Y~d~~~-~~~I~~dG~~~~~ed-Lgv~-p--ed~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 128 (284)
..|.+.|..|-..++ .+.|+.+-+..++.. ||.. + +.+.- +...+....-|.|+-+||+..+...
T Consensus 22 ~~l~~aF~~fD~~dg~~G~Is~~EL~~~l~~~lg~~~~~~~ev~~--li~~~D~d~dG~Idf~EF~~~~~~~ 91 (106)
T 2h2k_A 22 ETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDE--KMKSLDVNQDSELKFNEYWRLIGEL 91 (106)
T ss_dssp HHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHCTTTTTTCCCHHH--HHHHHCTTCSSSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHcccCCCCCEECHHHHHHHHHHHcCcCCCCHHHHHH--HHHHHCCCCCCCCcHHHHHHHHHHH
Confidence 568888999962233 358999999999975 8733 2 33333 3334555667999999999988764
No 257
>3u0k_A Rcamp; fluorescent protein, calcium binding, EF-hand, genetically E calcium indicator; HET: NFA CRK; 2.10A {Entacmaea quadricolor}
Probab=77.21 E-value=4.7 Score=39.04 Aligned_cols=65 Identities=11% Similarity=0.157 Sum_probs=50.8
Q ss_pred HHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHH
Q psy9055 61 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGML 126 (284)
Q Consensus 61 ~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~ 126 (284)
...|.+.|..| |.+..+.|+.+-+.+++..+|..+.+-.+--|...+....-|.|+.+||++-|.
T Consensus 374 eeeLreAFk~f-DkDgdG~IS~eELr~vL~~lGe~LSdeEIdeLfke~D~DgDGkIsyeEFvkmMt 438 (440)
T 3u0k_A 374 EEEIREAFRVF-DKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 438 (440)
T ss_dssp CHHHHHHHHHH-CTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHC
T ss_pred HHHHHHHHHHH-CCCCcCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHhC
Confidence 35788889888 445557899999999999999888776665555566666779999999998664
No 258
>1psr_A Psoriasin, S100A7; EF-hand protein, MAD phasing, psoriasis, S100 protein family; 1.05A {Homo sapiens} SCOP: a.39.1.2 PDB: 2psr_A 2wor_A* 2wos_A* 3psr_A 2wnd_A
Probab=76.85 E-value=3.1 Score=31.11 Aligned_cols=66 Identities=14% Similarity=0.231 Sum_probs=45.8
Q ss_pred HHHHHHHHHHhcCCCCCCccCHHHHHHHHHH-----cCC--CCCchHHHHHHHhhcccccccccHHHHHHHHHHh
Q psy9055 61 RKKLESLYSKYKDASEPDKILVEGIMKFLDD-----LSL--SPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 61 ~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~ed-----Lgv--~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 128 (284)
...|.+.|..|-+. + +.|+.+-+.+++.. ||. .+.+-.+--+...+....-|.|+-+||+..+..+
T Consensus 9 ~~~l~~~F~~fD~~-~-g~Is~~El~~~l~~~~~~~lg~~~~~~~~ev~~l~~~~D~d~dG~I~f~EF~~~~~~~ 81 (100)
T 1psr_A 9 IIGMIDMFHKYTRR-D-DKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFEKKDKNEDKKIDFSEFLSLLGDI 81 (100)
T ss_dssp HHHHHHHHHHTCCT-T-SCBCHHHHHHHHHHHCHHHHHHHHHTTCCGGGTHHHHHCTTCSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCC-C-CeECHHHHHHHHHHHhHhhhccccccCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 35688889999532 3 59999999999976 554 3332222223344556667999999999988764
No 259
>1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3
Probab=76.23 E-value=5.8 Score=41.02 Aligned_cols=65 Identities=14% Similarity=0.286 Sum_probs=51.1
Q ss_pred HHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHh
Q psy9055 62 KKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 62 ~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 128 (284)
..+..+|..| |.+..+.|+.+-+.+.+..+|..+.+..+-.|...+. ..-|.|+.+||+..+..+
T Consensus 607 ~~l~~~F~~~-D~d~~G~Is~~El~~~l~~~g~~l~~~~~~~l~~~~d-d~dg~I~~~eF~~~~~~~ 671 (900)
T 1qxp_A 607 RNYLTIFRKF-DLDKSGSMSAYEMRMAIEAAGFKLPCQLHQVIVARFA-DDELIIDFDNFVRCLVRL 671 (900)
T ss_dssp HHHHHHHGGG-CTTCCSCCBHHHHHHHHHHTTEECCHHHHHHHHHHTS-CSSSBCCHHHHHHHHHHH
T ss_pred HHHHHHHHhh-CCCCCCeECHHHHHHHHHHhCCCCCHHHHHHHHHHhC-CCCCeEcHHHHHHHHHHH
Confidence 5677788888 4445578999999999999998877665555555555 667999999999998874
No 260
>2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A
Probab=74.51 E-value=16 Score=30.42 Aligned_cols=66 Identities=14% Similarity=0.265 Sum_probs=46.3
Q ss_pred cHHHHHHHHHHhc--CC-----CC-C--CccCHHHHHHHHHHcCCCCCchHHHHHHHhhccccccc-ccHHHHHHHHHHh
Q psy9055 60 DRKKLESLYSKYK--DA-----SE-P--DKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCE-FSRDEFMNGMLEL 128 (284)
Q Consensus 60 ~~~~l~~lFd~Y~--d~-----~~-~--~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~-~tr~eF~~g~~~l 128 (284)
+++.|..+|..|. ++ +. . +.|+.+-+.+ +..||.+|..-.+ ...+....-|. |+.+||+..+..+
T Consensus 46 s~~ei~~l~~~F~~~D~~~~~~d~~~~dG~I~~~E~~~-l~~lg~~~~~~~l---f~~~D~d~dG~~I~f~EF~~~~~~~ 121 (214)
T 2l4h_A 46 TKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILS-LPELKANPFKERI---CRVFSTSPAKDSLSFEDFLDLLSVF 121 (214)
T ss_dssp CHHHHHHHHHHHHHHSCGGGCCHHHHTTSEECHHHHTT-CHHHHTSTTHHHH---HHHHCCSSSCCSEEHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHhCcccccccccccCCcCCHHHHHH-hhccCCChHHHHH---HHHhCcCCCCCEecHHHHHHHHHHH
Confidence 4556666666554 33 11 2 6899999999 8899999875443 33345566799 9999999999875
Q ss_pred C
Q psy9055 129 G 129 (284)
Q Consensus 129 ~ 129 (284)
.
T Consensus 122 ~ 122 (214)
T 2l4h_A 122 S 122 (214)
T ss_dssp S
T ss_pred c
Confidence 3
No 261
>1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A*
Probab=74.44 E-value=3 Score=33.35 Aligned_cols=66 Identities=14% Similarity=0.111 Sum_probs=46.6
Q ss_pred HHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCC-----CC--CchHHHH--HHHhhcccccccccHHHHHHHHHH
Q psy9055 61 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSL-----SP--ESKLVLI--IAWRFKAAAQCEFSRDEFMNGMLE 127 (284)
Q Consensus 61 ~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv-----~p--ed~~~Lv--La~~l~a~~~g~~tr~eF~~g~~~ 127 (284)
...+..+|..| |.+..+.|+.+-+.+++..+|. .+ +.+..++ +...+....-|.|+.+||+..+..
T Consensus 97 ~~~l~~~F~~~-D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~ 171 (183)
T 1dgu_A 97 DIKSHYAFRIF-DFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVISR 171 (183)
T ss_dssp HHHHHHHHHHH-CTTCSSEEEHHHHHHHHHHHHSSSCCCHHHHHHHHHHHHHHHHHHCTTSSSEEEHHHHHHHHCS
T ss_pred HHHHHHHHHHh-CCCCCCcCCHHHHHHHHHHHhcccccCCCCHHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHh
Confidence 45788899988 4445578999999999999876 22 2222221 344455566799999999987765
No 262
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=73.63 E-value=4.3 Score=40.73 Aligned_cols=67 Identities=13% Similarity=0.137 Sum_probs=8.4
Q ss_pred HHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHhC
Q psy9055 62 KKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLELG 129 (284)
Q Consensus 62 ~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~ 129 (284)
..|.++|+.+- .+..+.|+.+-+.+++..||+++..-.+--+...+....-|.|+-+||+.-+..+.
T Consensus 11 ~~l~~~F~~fD-~d~dG~Is~~El~~~l~~lg~~~s~~el~~lf~~~D~d~~G~I~f~EF~~~~~~l~ 77 (624)
T 1djx_A 11 HWIHSCLRKAD-KNKDNKMNFKELKDFLKELNIQVDDGYARKIFRECDHSQTDSLEDEEIETFYKMLT 77 (624)
T ss_dssp ----------------------------------------------------------CTTHHHHHHT
T ss_pred HHHHHHHHHhC-CCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHhc
Confidence 46777888873 33447899999999999999987665544444445556679999999999998764
No 263
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=72.86 E-value=1.8 Score=40.86 Aligned_cols=68 Identities=16% Similarity=0.269 Sum_probs=26.3
Q ss_pred cHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHh
Q psy9055 60 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 60 ~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 128 (284)
....+..+|..| |.+..+.|+.+-+.+++..+|..+.+..+--+...+....-|.|+.+||++.+..+
T Consensus 415 ~~~~~~~~F~~~-D~d~dG~Is~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~ 482 (486)
T 3mwu_A 415 SRERMERAFKMF-DKDGSGKISTKELFKLFSQADSSIQMEELESIIEQVDNNKDGEVDFNEFVEMLQNF 482 (486)
T ss_dssp CHHHHHHHHHHH-CSSCSSSBCSSCC--------------------CCCCSSCSSSBCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHh-CCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHh
Confidence 345566666666 33333566666666666666644433332222223333445666666666665553
No 264
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=71.96 E-value=9.3 Score=35.93 Aligned_cols=67 Identities=10% Similarity=0.229 Sum_probs=48.6
Q ss_pred cHHHHHHHHHHhcCCCCCCccCHHHH----HHHHHHcCCCCC----------chHHHHHHHhhcccccccccHHHHHHHH
Q psy9055 60 DRKKLESLYSKYKDASEPDKILVEGI----MKFLDDLSLSPE----------SKLVLIIAWRFKAAAQCEFSRDEFMNGM 125 (284)
Q Consensus 60 ~~~~l~~lFd~Y~d~~~~~~I~~dG~----~~~~edLgv~pe----------d~~~LvLa~~l~a~~~g~~tr~eF~~g~ 125 (284)
..+.+.++|+.| |.+..+.|+.+-+ .+++..+|+++. ...+-.+...+....-|.|+.+||+..+
T Consensus 329 ~~~~l~~~F~~~-D~d~dG~I~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~Ef~~~~ 407 (486)
T 3mwu_A 329 ETKQLTEIFRKL-DTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLMPLLDMDGSGSIEYSEFIASA 407 (486)
T ss_dssp HHHHHHHHHHHH-CTTCSSSBCHHHHHHHHHHHHHHHTCCGGGHHHHTSSCHHHHHHHHHHHHCTTCCSSBCHHHHHHHH
T ss_pred HHHHHHHHHHHh-CCCCCceeeHHHHHHHHHHhhhhhcccchhcccccchhhHHHHHHHHHHhcCCCCCcCcHHHHHHHH
Confidence 346788889988 4445578998888 556667799887 3344445556667778999999998876
Q ss_pred HH
Q psy9055 126 LE 127 (284)
Q Consensus 126 ~~ 127 (284)
..
T Consensus 408 ~~ 409 (486)
T 3mwu_A 408 ID 409 (486)
T ss_dssp SC
T ss_pred Hh
Confidence 44
No 265
>2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A
Probab=71.77 E-value=42 Score=27.77 Aligned_cols=67 Identities=18% Similarity=0.095 Sum_probs=46.7
Q ss_pred HHHHHHHHHhcCC-CCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHhC
Q psy9055 62 KKLESLYSKYKDA-SEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLELG 129 (284)
Q Consensus 62 ~~l~~lFd~Y~d~-~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~ 129 (284)
+.+.++|..+-.. +..+.|+.+-+...+.. +..+....+--+...+....-|.|+.+||+..+..++
T Consensus 48 ~~l~~~F~~~D~d~~~~G~I~~~El~~~l~~-~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~ 115 (226)
T 2zfd_A 48 EALYELFKKISSAVIDDGLINKEEFQLALFK-TNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFH 115 (226)
T ss_dssp HHHHHHHHHHHTSSSCSSSBCHHHHHHHHHS-CSSCCCHHHHHHHHHHCSSCSSSBCHHHHHHHHHHTS
T ss_pred HHHHHHHHHhCcccCCCCeEcHHHHHHHHhc-cCcccHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHc
Confidence 4466667766432 14478999999998876 4444444332355667777789999999999999875
No 266
>3i5g_C Myosin catalytic light chain LC-1, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_C 3i5h_C 3i5i_C
Probab=71.63 E-value=3.4 Score=33.22 Aligned_cols=66 Identities=11% Similarity=0.166 Sum_probs=46.0
Q ss_pred HHHHHHHHHhcC-CCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHh
Q psy9055 62 KKLESLYSKYKD-ASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 62 ~~l~~lFd~Y~d-~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 128 (284)
+.+.+.|+.|-. .+..+.|+.+=+...+..||++|....+--+... ....-|.|+-++|+..+..+
T Consensus 9 ~elre~F~~fD~~~d~dG~I~~~El~~~lr~lG~~~t~~el~~~~~~-d~~~~g~i~f~eFl~~~~~~ 75 (159)
T 3i5g_C 9 EEVREVFDLFDFWDGRDGDVDAAKVGDLLRCLGMNPTEAQVHQHGGT-KKMGEKAYKLEEILPIYEEM 75 (159)
T ss_dssp HHHHHHHHHHHHHTTSSSCEEGGGHHHHHHHTTCCCCHHHHHTTTCC-SSTTSCEECHHHHHHHHHHH
T ss_pred HHHHHHHHHHCcCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHcc-cccCCCcccHHHHHHHHHHh
Confidence 456667777731 1234689999999999999999987654333211 12235889999999988764
No 267
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=71.57 E-value=8.1 Score=36.59 Aligned_cols=67 Identities=16% Similarity=0.201 Sum_probs=52.8
Q ss_pred cHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHc--------CCCCCchHHHHHHHhhcccccccccHHHHHHHHHH
Q psy9055 60 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDL--------SLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE 127 (284)
Q Consensus 60 ~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edL--------gv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~ 127 (284)
..+.+.++|+.+ |.+..+.|+.+-+...+..+ |+.+....+-.+...+....-|.|+.+||+..+..
T Consensus 353 ~~~~l~~~F~~~-D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~ 427 (504)
T 3q5i_A 353 ERKELTDIFKKL-DKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKNGYIEYSEFISVCMD 427 (504)
T ss_dssp HHHHHHHHHHHH-CTTCSSEECHHHHHHHHHHHHHHC--CCSCCCHHHHHHHHHHHHCTTCSSSEEHHHHHHHHSC
T ss_pred HHHHHHHHHHee-CCCCCCeEcHHHHHHHHHHhhhcccccccccccHHHHHHHHHHhCCCCCCcEeHHHHHHHHHh
Confidence 346788899998 43455799999999999888 66776666666777777778899999999987754
No 268
>3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B
Probab=70.81 E-value=12 Score=29.56 Aligned_cols=62 Identities=13% Similarity=0.168 Sum_probs=45.9
Q ss_pred HHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHh
Q psy9055 62 KKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 62 ~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 128 (284)
+.|.+.|..| |.+..+.|+.+-+...+..||.+|.+..+-.+-. ..-|.|+-++|+..+...
T Consensus 16 ~elk~~F~~~-D~d~dG~I~~~El~~~l~~lg~~~~~~~~~~~~~----~~~~~i~f~ef~~~~~~~ 77 (153)
T 3i5g_B 16 QELKEAFTMI-DQDRDGFIGMEDLKDMFSSLGRVPPDDELNAMLK----ECPGQLNFTAFLTLFGEK 77 (153)
T ss_dssp HHHHHHHHHH-CCSTTSCCCHHHHHHHHHHTTSCCCHHHHHHHHH----TSSSCCCSHHHHHTTTTT
T ss_pred HHHHHHHHHH-CCCCCCeEcHHHHHHHHHHcCCCccHHHHHHHHH----hccCCccHHHHHHHHHhh
Confidence 4566778888 4445579999999999999999998765433221 234679999999887654
No 269
>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A
Probab=70.35 E-value=6.6 Score=33.05 Aligned_cols=68 Identities=15% Similarity=0.189 Sum_probs=51.0
Q ss_pred ccHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHc----CCCCCchHHHH----HHHhhcccccccccHHHHHHHHHH
Q psy9055 59 VDRKKLESLYSKYKDASEPDKILVEGIMKFLDDL----SLSPESKLVLI----IAWRFKAAAQCEFSRDEFMNGMLE 127 (284)
Q Consensus 59 ~~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edL----gv~ped~~~Lv----La~~l~a~~~g~~tr~eF~~g~~~ 127 (284)
.....+..+|..| |.+..+.|+.+-+.+++..+ |..+.+..+-. +...+....-|.|+.+||+..+..
T Consensus 101 ~~~~~l~~~F~~~-D~d~~G~i~~~e~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~ 176 (272)
T 2be4_A 101 DNSVEFMKIWRKY-DADSSGYISAAELKNFLKDLFLQHKKKIPPNKLDEYTDAMMKIFDKNKDGRLDLNDLARILAL 176 (272)
T ss_dssp CCHHHHHHHHHHH-CTTCCSEEEGGGHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHCSSCSSEEEHHHHGGGSCC
T ss_pred ccHHHHHHHHHHh-CCCCCCccCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhccCCCCcCcHHHHHHHHhh
Confidence 3567889999998 44455789999999999988 88776544321 444556667899999999987754
No 270
>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A
Probab=70.04 E-value=41 Score=27.00 Aligned_cols=67 Identities=16% Similarity=0.062 Sum_probs=44.6
Q ss_pred HHHHHHHHHhcCCC--CCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHhCC
Q psy9055 62 KKLESLYSKYKDAS--EPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLELGC 130 (284)
Q Consensus 62 ~~l~~lFd~Y~d~~--~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~ 130 (284)
+.+.++|..+-. + ..+.|+.+-+...+.. +.......+--+...+....-|.|+.+||+..+..++.
T Consensus 37 ~~l~~~F~~~D~-d~~~~G~i~~~e~~~~l~~-~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~ 105 (207)
T 2ehb_A 37 EALYELFKKLSS-SIIDDGLIHKEEFQLALFR-NRNRRNLFADRIFDVFDVKRNGVIEFGEFVRSLGVFHP 105 (207)
T ss_dssp HHHHHHHHHHTT-SSSCSSCEEHHHHHHHHHS-CTTCCCHHHHHHHHHHCTTCSSEECHHHHHHHHGGGST
T ss_pred HHHHHHHHHhcc-ccCCCCccCHHHHHHHHhc-cccccHHHHHHHHHHhcCCCCCeEeHHHHHHHHHHHcc
Confidence 456666776643 3 4468999888888865 33333333322555666677799999999999887653
No 271
>2crn_A Ubash3A protein; compact three-helix bundle, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=69.36 E-value=4.5 Score=28.63 Aligned_cols=39 Identities=10% Similarity=0.033 Sum_probs=32.9
Q ss_pred HHHHHHHHhhhCCCHHHHHHHHHhCCC-ChHHHHHhhcCCC
Q psy9055 9 KDKVKRFISFTQTGELTAINCLSQNDW-KLDLASDNYFQNP 48 (284)
Q Consensus 9 ~~~i~qF~~iT~~s~~~A~~~L~~~~w-~l~~A~~~fy~~~ 48 (284)
.+.|++.++ .|-+++.|++.|..+++ +++.|++-.++..
T Consensus 10 e~~v~~L~~-MGF~~~~a~~AL~~t~n~~~e~A~~wL~~h~ 49 (64)
T 2crn_A 10 PSLLEPLLA-MGFPVHTALKALAATGRKTAEEALAWLHDHC 49 (64)
T ss_dssp CSSHHHHHH-TSCCHHHHHHHHHHHTSCCHHHHHHHHHHHS
T ss_pred HHHHHHHHH-cCCCHHHHHHHHHHhCCCCHHHHHHHHHhCC
Confidence 346888888 59999999999999865 9999999888653
No 272
>3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi}
Probab=68.89 E-value=4.9 Score=33.57 Aligned_cols=66 Identities=14% Similarity=0.055 Sum_probs=45.1
Q ss_pred HHHHHHHHHHhcCCCCCCccCHHHHHHHHHH-cCCCCCc--hHHHHHHH------hhc-ccccccccHHHHHHHHHH
Q psy9055 61 RKKLESLYSKYKDASEPDKILVEGIMKFLDD-LSLSPES--KLVLIIAW------RFK-AAAQCEFSRDEFMNGMLE 127 (284)
Q Consensus 61 ~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~ed-Lgv~ped--~~~LvLa~------~l~-a~~~g~~tr~eF~~g~~~ 127 (284)
...+..+|..|- .+..+.|+.+-+.+.+.. ||++|.. +.-++-.. .+. ...-|.|+.+||+..+..
T Consensus 47 ~~~l~~~F~~~D-~d~dG~I~~~El~~~l~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~I~~~EF~~~~~~ 122 (219)
T 3cs1_A 47 KQRRIELFKKFD-KNETGKLCYDEVYSGCLEVLKLDEFTSRVRDITKRAFDKSRTLGSKLENKGSEDFVEFLEFRLM 122 (219)
T ss_dssp HHHHHHHHHHHC-TTCSSCBCHHHHHHHHHHTTCGGGTCSCHHHHHHHHHHHHHHHHHHHHTSCCCSSBCHHHHHHH
T ss_pred HHHHHHHHHHhC-CCCCCcCcHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHhhhhccCCCCcCCHHHHHHHHHH
Confidence 456788898884 344578999999999987 8988754 32222111 111 255689999999987655
No 273
>1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A
Probab=68.20 E-value=30 Score=24.81 Aligned_cols=64 Identities=9% Similarity=0.077 Sum_probs=47.3
Q ss_pred ccHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHH-hhcccccccccHHHHHHHHHHh
Q psy9055 59 VDRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAW-RFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 59 ~~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~-~l~a~~~g~~tr~eF~~g~~~l 128 (284)
++...+.++|..+- ..+.|+.+.+.+++ ...++...-+.-++ .+-...-|.|++++|...+..+
T Consensus 7 ~t~~e~~~~~~~~d---~~g~i~~~ef~~~~---~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~ 71 (110)
T 1pva_A 7 LKADDIKKALDAVK---AEGSFNHKKFFALV---GLKAMSANDVKKVFKAIDADASGFIEEEELKFVLKSF 71 (110)
T ss_dssp SCHHHHHHHHHHTC---STTCCCHHHHHHHH---TCTTSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGT
T ss_pred CCHHHHHHHHHhcC---CCCcCcHHHHHHHH---ccCcchHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 46788999999985 23579988887776 34555555555444 4556778999999999999887
No 274
>4drw_A Protein S100-A10/annexin A2 chimeric protein; atypical EF-hand, heteropentameric complex, membrane repair; 3.50A {Homo sapiens}
Probab=67.81 E-value=10 Score=29.78 Aligned_cols=67 Identities=10% Similarity=0.128 Sum_probs=52.9
Q ss_pred HHHHHHHHHhcCCCCCCccCHHHHHHHHHH-----cCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHhCC
Q psy9055 62 KKLESLYSKYKDASEPDKILVEGIMKFLDD-----LSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLELGC 130 (284)
Q Consensus 62 ~~l~~lFd~Y~d~~~~~~I~~dG~~~~~ed-----Lgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~ 130 (284)
..|..+|.+|.. + .+.|+.+=+.+++.. ||-.+....+=-+-..+-.-.-|.|+=+||+.-+..+-+
T Consensus 15 e~l~~~F~~yd~-d-dG~Is~~EL~~~l~~~~~~~l~~~~~~~~v~~~i~~~D~d~DG~IdF~EF~~lm~~l~~ 86 (121)
T 4drw_A 15 ETMMFTFHKFAG-D-KGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAGLTI 86 (121)
T ss_dssp HHHHHTTGGGSC-T-TCSCCHHHHHHHTTTSCHHHHTTSSCTTHHHHHHHHHCTTCSSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcC-C-CCEEcHHHHHHHHHHHhhhhcccCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHHH
Confidence 356667888854 2 478999999999976 888777766666777778888899999999998888643
No 275
>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5
Probab=67.16 E-value=8.8 Score=31.21 Aligned_cols=69 Identities=10% Similarity=0.073 Sum_probs=38.5
Q ss_pred cHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHhC
Q psy9055 60 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLELG 129 (284)
Q Consensus 60 ~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~ 129 (284)
....+..+|..+- .+..+.|+.+-+..++..+.-......+..+-..+-...-|.|+++||...+..+|
T Consensus 44 ~~~~~~~l~~~~D-~d~dG~I~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~g 112 (188)
T 1s6i_A 44 MESEIKDLMDAAD-IDKSGTIDYGEFIAATVHLNKLEREENLVSAFSYFDKDGSGYITLDEIQQACKDFG 112 (188)
T ss_dssp CHHHHHHHHHHTC-TTCSSEECHHHHHHHHTTSSSSCCCCSTHHHHHHTTTTCSSEEEHHHHHHTTTTTT
T ss_pred CHHHHHHHHHHcC-CCCCCeEeHHHHHHHHHHHhccCHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcC
Confidence 3456777777763 23335677777777765543221111222222234455567777777777776665
No 276
>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1
Probab=66.96 E-value=5.3 Score=40.76 Aligned_cols=66 Identities=9% Similarity=0.068 Sum_probs=52.6
Q ss_pred HHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHh
Q psy9055 62 KKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 62 ~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 128 (284)
..+..+|..| |.+..+.|+.+-+...+..+|..+.+..+=.+...+....-|.|+.+||+..|...
T Consensus 725 ~~~~~~F~~~-D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~ 790 (863)
T 1sjj_A 725 NEFRASFNHF-DRKKTGMMDCEDFRACLISMGYNMGEAEFARIMSIVDPNRMGVVTFQAFIDFMSRE 790 (863)
T ss_dssp HHHHHHHTTT-CSSSSSEEESTTHHHHHHHHTCCCCTHHHHHHHHHHCTTSCSEEETTHHHHTHHHH
T ss_pred HHHHHHHHHH-CCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 4566677777 44455789999999999999999887666666666666778999999999998875
No 277
>3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L
Probab=66.93 E-value=8.9 Score=38.80 Aligned_cols=65 Identities=18% Similarity=0.319 Sum_probs=47.8
Q ss_pred HHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHh
Q psy9055 62 KKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 62 ~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 128 (284)
..+..+|..| |.+..+.|+.+-+.+.+..+|..+.+-.+-.|...+. ..-|.|+.+||+..+..+
T Consensus 605 ~~l~~~F~~~-D~d~dG~Is~~El~~~L~~~G~~ls~~~~~~l~~~~D-d~dG~Isf~EF~~~l~~~ 669 (714)
T 3bow_A 605 QKYQKIYREI-DVDRSGTMNSYEMRKALEEAGFKLPCQLHQVIVARFA-DDELIIDFDNFVRCLVRL 669 (714)
T ss_dssp HHHHHHHHHH-CTTCCSSEEHHHHHHHHHHTTEECCHHHHHHHHHHHS-CTTCEECHHHHHHHHHHH
T ss_pred HHHHHHHHHh-CCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHHHhC-CCCCeEcHHHHHHHHHHH
Confidence 4567778887 4445578999999999999997766554444444555 667889999999988764
No 278
>2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens}
Probab=66.90 E-value=19 Score=29.29 Aligned_cols=60 Identities=8% Similarity=-0.006 Sum_probs=42.2
Q ss_pred CCccCHHHHHHHHHHc------CCCCCchHHHHHHHhhcccccccccHHHHHHHHHHhCCCcHHHHHhhcc
Q psy9055 77 PDKILVEGIMKFLDDL------SLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLELGCDSIEKLKMRLP 141 (284)
Q Consensus 77 ~~~I~~dG~~~~~edL------gv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~~si~~lk~~l~ 141 (284)
.+.|+.+-+...+..| |..+....+--+.-.+....-|.|+.+||+..|..+ .+++....
T Consensus 18 dG~I~~~EL~~~l~~l~~~~~~g~~~~~~~~~~l~~~~D~d~~G~I~f~EF~~~~~~~-----~~l~~aF~ 83 (174)
T 2i7a_A 18 GSDIDATQLQGLLNQELLTGPPGDMFSLDECRSLVALMELKVNGRLDQEEFARLWKRL-----VHYQHVFQ 83 (174)
T ss_dssp CCCEEHHHHHHHHHHHHC-----CCCCHHHHHHHHHHHCSSCSSEECHHHHHHHHHHH-----HHHHHHHH
T ss_pred CCcCCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHH-----HHHHHHHH
Confidence 3689999999999998 556654444444455666667999999999988764 45555443
No 279
>1aip_C EF-TS, elongation factor TS; nucleotide exchange, GTP-binding, complex of two elongation factors; 3.00A {Thermus thermophilus} SCOP: a.5.2.2 d.43.1.1
Probab=66.77 E-value=7.5 Score=33.63 Aligned_cols=38 Identities=18% Similarity=0.267 Sum_probs=34.7
Q ss_pred hHHHHHHHHhhhCCCHHHHHHHHHhCCCChHHHHHhhc
Q psy9055 8 QKDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYF 45 (284)
Q Consensus 8 ~~~~i~qF~~iT~~s~~~A~~~L~~~~w~l~~A~~~fy 45 (284)
..+.|.+..+.||+.--.+..-|..++||++.|++--=
T Consensus 3 ~a~~VKeLRe~TGagmmdCKkAL~e~~GD~ekAie~LR 40 (196)
T 1aip_C 3 QMELIKKLREATGAGMMDVKRALEDAGWDEEKAVQLLR 40 (196)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHHHHHTTTCHHHHHHHHH
T ss_pred hHHHHHHHHHHhCCCHHHHHHHHHHcCCCHHHHHHHHH
Confidence 45789999999999999999999999999999998653
No 280
>1aua_A Phosphatidylinositol transfer protein SEC14P; phospholipid-binding protein, peripheral golgi membrane protein, phospholipid exchange; HET: BOG; 2.50A {Saccharomyces cerevisiae} SCOP: a.5.3.1 c.13.1.1
Probab=66.71 E-value=7.8 Score=34.33 Aligned_cols=42 Identities=17% Similarity=0.341 Sum_probs=36.1
Q ss_pred CCCcchHHHHHHHHhhhC-------CCHHHHHHHHHhCCCChHHHHHhh
Q psy9055 3 KLKSSQKDKVKRFISFTQ-------TGELTAINCLSQNDWKLDLASDNY 44 (284)
Q Consensus 3 ~l~~~~~~~i~qF~~iT~-------~s~~~A~~~L~~~~w~l~~A~~~f 44 (284)
.|+..|++.|++|.+... .++....+||.+.+||++.|...+
T Consensus 25 ~l~~~q~~~l~~lr~~l~~~~~~~~~dd~~LlRFLrarkfdv~~A~~~l 73 (296)
T 1aua_A 25 NLDSAQEKALAELRKLLEDAGFIERLDDSTLLRFLRARKFDVQLAKEMF 73 (296)
T ss_dssp TCCTTHHHHHHHHHHHHHHTTCCSSCSHHHHHHHHHHTTTCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHhcCCCCCCchHHHHHHHHHcCCCHHHHHHHH
Confidence 578889999999987653 567899999999999999998876
No 281
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=66.15 E-value=13 Score=34.94 Aligned_cols=66 Identities=20% Similarity=0.253 Sum_probs=34.3
Q ss_pred HHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHhC
Q psy9055 61 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLELG 129 (284)
Q Consensus 61 ~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~ 129 (284)
...+..+|..| |.++.+.|+.+-+.+++...+++.+.+. -+-..+....-|.|+.+||++.|++++
T Consensus 425 ~~~~~~~F~~~-D~d~~G~Is~~El~~~l~~~~~~~~~~~--~~~~~~D~d~dG~I~~~EF~~~~~~~~ 490 (494)
T 3lij_A 425 KDKLESAFQKF-DQDGNGKISVDELASVFGLDHLESKTWK--EMISGIDSNNDGDVDFEEFCKMIQKLC 490 (494)
T ss_dssp HHHHHHHHHHH-CTTCSSEECHHHHHHHC-CCSCCCHHHH--HHHHTTCSSSSSSEEHHHHHHHHHHHS
T ss_pred HHHHHHHHHHH-CCCCCCcCCHHHHHHHHHhcCCCHHHHH--HHHHHhCCCCCCcCCHHHHHHHHHhhc
Confidence 34566666666 3334456666666666655333333222 222233344556677777776666654
No 282
>3q8g_A CRAL-TRIO domain-containing protein YKL091C; string motif, signaling protein, directed evoluti SEC14, phospholipid transporter, lipid; HET: PEE; 1.80A {Saccharomyces cerevisiae} PDB: 3b7n_A* 3b74_A* 3b7q_A* 3b7z_A*
Probab=63.35 E-value=8.5 Score=35.04 Aligned_cols=42 Identities=14% Similarity=0.332 Sum_probs=36.8
Q ss_pred CCCcchHHHHHHHHhhh-------CCCHHHHHHHHHhCCCChHHHHHhh
Q psy9055 3 KLKSSQKDKVKRFISFT-------QTGELTAINCLSQNDWKLDLASDNY 44 (284)
Q Consensus 3 ~l~~~~~~~i~qF~~iT-------~~s~~~A~~~L~~~~w~l~~A~~~f 44 (284)
.|+..|++.|++|.+.. ..++..-.+||.+.+||++.|...+
T Consensus 34 ~lt~~q~~~l~~lR~~l~~~~~~~~~dD~~LLRFLRArkfdv~kA~~mL 82 (320)
T 3q8g_A 34 NLTKEQEEALLQFRSILLEKNYKERLDDSTLLRFLRARKFDINASVEMF 82 (320)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTCCSSCSHHHHHHHHHHTTTCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHcCCCHHHHHHHH
Confidence 57888999999999875 3567899999999999999999877
No 283
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=63.32 E-value=18 Score=33.84 Aligned_cols=31 Identities=6% Similarity=0.059 Sum_probs=13.4
Q ss_pred HHHHHHHHHHhcCCCCCCccCHHHHHHHHHHc
Q psy9055 61 RKKLESLYSKYKDASEPDKILVEGIMKFLDDL 92 (284)
Q Consensus 61 ~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edL 92 (284)
...+.++|..+- .+..+.|+.+-+...+...
T Consensus 381 ~~~~~~~~~~~D-~d~~g~i~~~Ef~~~~~~~ 411 (484)
T 3nyv_A 381 EHEVDQVLDAVD-FDKNGYIEYSEFVTVAMDR 411 (484)
T ss_dssp HHHHHHHHHHHT-CCTTSEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHhC-CCCCCeEeHHHHHHHHHhc
Confidence 344445555442 2222445555444444433
No 284
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=63.20 E-value=15 Score=34.64 Aligned_cols=66 Identities=17% Similarity=0.215 Sum_probs=37.0
Q ss_pred HHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHhC
Q psy9055 61 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLELG 129 (284)
Q Consensus 61 ~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~ 129 (284)
...+..+|+.| |.++.+.|+.+-+.+++...+++.+.+.- +...+....-|.|+.+||++.|.+++
T Consensus 434 ~~~~~~~F~~~-D~d~dG~Is~~El~~~l~~~~~~~~~~~~--~~~~~D~d~dG~I~~~EF~~~~~~~~ 499 (504)
T 3q5i_A 434 EERLRRAFNLF-DTDKSGKITKEELANLFGLTSISEKTWND--VLGEADQNKDNMIDFDEFVSMMHKIC 499 (504)
T ss_dssp HHHHHHHHHHH-CTTCCSEECHHHHHHHTTCSCCCHHHHHH--HHHTTCSSCSSSEEHHHHHHHHHHHC
T ss_pred HHHHHHHHHHh-cCCCCCcCcHHHHHHHHhhCCCCHHHHHH--HHHHhCCCCCCcEeHHHHHHHHHHhc
Confidence 35566666666 33344567777777666665544433222 22333444556777777777666643
No 285
>2dhy_A CUE domain-containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=62.99 E-value=9.9 Score=27.23 Aligned_cols=40 Identities=15% Similarity=0.101 Sum_probs=34.6
Q ss_pred chHHHHHHHHhhh-CCCHHHHHHHHHhCCCChHHHHHhhcC
Q psy9055 7 SQKDKVKRFISFT-QTGELTAINCLSQNDWKLDLASDNYFQ 46 (284)
Q Consensus 7 ~~~~~i~qF~~iT-~~s~~~A~~~L~~~~w~l~~A~~~fy~ 46 (284)
...+.+.++.++. +.+..+.+.-|+++++|++.||+....
T Consensus 17 ~~~~~v~~L~~MFP~lD~~vI~~vL~a~~G~vd~aId~LL~ 57 (67)
T 2dhy_A 17 EFNQAMDDFKTMFPNMDYDIIECVLRANSGAVDATIDQLLQ 57 (67)
T ss_dssp CSHHHHHHHHHHCSSSCHHHHHHHHHHHTSCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHCCCCCHHHHHHHHHHcCCCHHHHHHHHHh
Confidence 4567889998888 558899999999999999999999874
No 286
>2jrf_A Tubulin polymerization-promoting protein family member 3; solution structure, structural genomics, PSI-2, protein structure initiative; NMR {Homo sapiens}
Probab=62.77 E-value=16 Score=31.17 Aligned_cols=70 Identities=20% Similarity=0.219 Sum_probs=50.5
Q ss_pred ccHHHHHHHHHHhcCC----CCCCccCHHHHHHHHHHcCCCC-Cc---hHHHHHHHhhcccccccccHHHHHHHHHHh
Q psy9055 59 VDRKKLESLYSKYKDA----SEPDKILVEGIMKFLDDLSLSP-ES---KLVLIIAWRFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 59 ~~~~~l~~lFd~Y~d~----~~~~~I~~dG~~~~~edLgv~p-ed---~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 128 (284)
++...|.++|..|..- .+...|+-..+.++|.|.||=. -. ..+=++--++++..--.|+=++|+..+..+
T Consensus 5 ~~~~~L~~~F~~F~~fG~~~~~~~eMd~~~F~KlcKD~~liDgk~~T~tdvDIiF~KvK~k~~rkI~feqF~~aL~~l 82 (184)
T 2jrf_A 5 TDIAGLEESFRKFAIHGDPKASGQEMNGKNWAKLCKDCKVADGKSVTGTDVDIVFSKVKGKSARVINYEEFKKALEEL 82 (184)
T ss_dssp SSCSHHHHHHHHHHSSSCTTSTTSEEEHHHHHHHHHHTTCCCSSSSCHHHHHHHHHHHCCSCCSEEEHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHhcCCCCCccccCcHHHHHHHHHHcCCccCCCCChhhcchhhheeccCcceeecHHHHHHHHHHH
Confidence 3556899999999962 2235799999999999999874 22 222223335666656679999999998875
No 287
>2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A
Probab=61.13 E-value=5.9 Score=32.51 Aligned_cols=64 Identities=14% Similarity=0.233 Sum_probs=45.5
Q ss_pred HHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHhC
Q psy9055 61 RKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLELG 129 (284)
Q Consensus 61 ~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~ 129 (284)
.+.+.++|..|- .+..+.|+.+-+..++ .||++|..-.+ ...+....-|.|+.+||+..+..+.
T Consensus 28 ~~~l~~~F~~~D-~d~dG~Is~~El~~~~-~lg~~~~~~~l---~~~~d~~~~g~i~~~EF~~~~~~~~ 91 (208)
T 2ct9_A 28 ITRLYSRFTSLD-KGENGTLSREDFQRIP-ELAINPLGDRI---INAFFSEGEDQVNFRGFMRTLAHFR 91 (208)
T ss_dssp HHHHHHHHHHHC-TTCSSEECTGGGGGCH-HHHTSTTHHHH---HHTTSCTTCSCEEHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHC-CCCCCcCcHHHHHHHH-HcCCCCcHHHH---HHHHcCCCCCcCcHHHHHHHHHhhc
Confidence 356777788873 3344688888888754 78998864332 3345566679999999999988753
No 288
>3a8r_A Putative uncharacterized protein; EF-hand, membrane, oxidoreductase, transmembrane, calcium BI protein; 2.40A {Oryza sativa japonica group}
Probab=61.05 E-value=21 Score=28.88 Aligned_cols=69 Identities=7% Similarity=0.065 Sum_probs=37.3
Q ss_pred HHHHHHHHHHhcC--CCCCCccCHHHHHHHHHHcCCCCCchHHHHHHH-hhcccccccccHHHHHHHHH-HhCC
Q psy9055 61 RKKLESLYSKYKD--ASEPDKILVEGIMKFLDDLSLSPESKLVLIIAW-RFKAAAQCEFSRDEFMNGML-ELGC 130 (284)
Q Consensus 61 ~~~l~~lFd~Y~d--~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~-~l~a~~~g~~tr~eF~~g~~-~l~~ 130 (284)
...+..+|+.+.. ..+.+.|+.+.+..++..+.- .+...-|.-+. .+-...-|.|+++|+...+. .+|.
T Consensus 58 ~~~~~~i~~~~d~~~~~~~~~i~~~ef~~~~~~~~~-~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~ 130 (179)
T 3a8r_A 58 DEFAVQMFDSLARKRGIVKQVLTKDELKDFYEQLTD-QGFDNRLRTFFDMVDKNADGRLTAEEVKEIIALSASA 130 (179)
T ss_dssp HHHHHHHHHHHHHHHTCCSSEECHHHHHHHHHHHHC-CCHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhccCCCCCcCHHHHHHHHHHHcC-CCHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHhcc
Confidence 3445555554431 122356777777777665531 12222233222 34455667888888887777 6654
No 289
>4ae4_A Ubiquitin-associated protein 1; protein transport, endosomal sorting, tetherin, VPU, HIV-1, monoubiquitin; HET: NHE; 1.65A {Homo sapiens} PDB: 4ae4_B*
Probab=61.04 E-value=9.8 Score=30.11 Aligned_cols=45 Identities=9% Similarity=0.192 Sum_probs=39.2
Q ss_pred CCCCcchHHHHHHHHhhhCCCHHHHHHHHHhCCCChHHHHHhhcCC
Q psy9055 2 HKLKSSQKDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQN 47 (284)
Q Consensus 2 ~~l~~~~~~~i~qF~~iT~~s~~~A~~~L~~~~w~l~~A~~~fy~~ 47 (284)
+-|++.+++.|.+++++ |-+...|+.-|.+++.|.+.|++-.+..
T Consensus 2 ~~l~~~e~~~v~~l~~M-GFp~~~~~kAl~~~g~~~e~amewL~~h 46 (118)
T 4ae4_A 2 SHMSPSERQCVETVVNM-GYSYECVLRAMKAAGANIEQILDYLFAH 46 (118)
T ss_dssp CCSCHHHHHHHHHHHHT-TCCHHHHHHHHHHHCSCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHc-CCCHHHHHHHHHHHCcCHHHHHHHHHHh
Confidence 35888999999999985 9999999999999988999999988754
No 290
>1xb2_B EF-TS, elongation factor TS, mitochondrial, EF-TSMT; protein-protein complex, translation; HET: MSE; 2.20A {Bos taurus} SCOP: a.5.2.2 d.43.1.1 d.43.1.1
Probab=60.94 E-value=9.6 Score=34.82 Aligned_cols=39 Identities=13% Similarity=0.046 Sum_probs=35.3
Q ss_pred hHHHHHHHHhhhCCCHHHHHHHHHhCCCChHHHHHhhcC
Q psy9055 8 QKDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQ 46 (284)
Q Consensus 8 ~~~~i~qF~~iT~~s~~~A~~~L~~~~w~l~~A~~~fy~ 46 (284)
..++|++..+.||+.--.+.+-|..++||++.|++--=.
T Consensus 4 ta~~VKeLRe~TGagmmdCKKAL~e~~GD~ekAie~LR~ 42 (291)
T 1xb2_B 4 SKELLMKLRRKTGYSFINCKKALETCGGDLKQAESWLHK 42 (291)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHHHHHTTTCHHHHHHHHHH
T ss_pred CHHHHHHHHHHhCCCHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 457899999999999999999999999999999986644
No 291
>1r5l_A Alpha-TTP, protein (alpha-tocopherol transfer protein); ataxia with vitamin E deficiency, transport protein; HET: MSE VIV; 1.50A {Homo sapiens} SCOP: a.5.3.1 c.13.1.1 PDB: 1oiz_A* 1oip_A*
Probab=60.92 E-value=4.9 Score=34.70 Aligned_cols=42 Identities=14% Similarity=0.139 Sum_probs=30.2
Q ss_pred CCCcchHHHHHHHHhhhC----------CCHHHHHHHHHhCCCChHHHHHhh
Q psy9055 3 KLKSSQKDKVKRFISFTQ----------TGELTAINCLSQNDWKLDLASDNY 44 (284)
Q Consensus 3 ~l~~~~~~~i~qF~~iT~----------~s~~~A~~~L~~~~w~l~~A~~~f 44 (284)
.|++.+++.|++|.+... .++....+||.+.+||++.|...+
T Consensus 3 ~ls~~~~~~l~~lr~~l~~~~~~~~~~~~dd~~LlRFLra~k~dv~~A~~~l 54 (262)
T 1r5l_A 3 HMSPLLQPGLAALRRRAREAGVPLAPLPLTDSFLLRFLRARDFDLDLAWRLL 54 (262)
T ss_dssp ------CTTHHHHHHHHHHHTCCCSSSCCCHHHHHHHHHHTTTCHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHHHhCCcccCCCCCCHHHHHHHHHhCCCCHHHHHHHH
Confidence 467788888888876642 467899999999999999999876
No 292
>1wlm_A Protein CGI-38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: a.39.1.11
Probab=60.19 E-value=16 Score=30.26 Aligned_cols=70 Identities=20% Similarity=0.215 Sum_probs=50.8
Q ss_pred ccHHHHHHHHHHhcCC----CCCCccCHHHHHHHHHHcCCCC-Cch---HHHHHHHhhcccccccccHHHHHHHHHHh
Q psy9055 59 VDRKKLESLYSKYKDA----SEPDKILVEGIMKFLDDLSLSP-ESK---LVLIIAWRFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 59 ~~~~~l~~lFd~Y~d~----~~~~~I~~dG~~~~~edLgv~p-ed~---~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 128 (284)
.+...|.++|..|..- .....|+-..+.++|.|.||=. -.+ .+=++--++++..-..|+=++|++.+..+
T Consensus 12 ~d~~~L~~~F~~F~~fG~~~~~~~~M~~~~f~Kl~kD~~lidgk~~T~tdvDiiF~KvK~k~~rkI~f~qF~~aL~~l 89 (151)
T 1wlm_A 12 TDIAGLEESFRKFAIHGDPKASGQEMNGKNWAKLCKDCKVADGKAVTGTDVDIVFSKVKAKSARVINYEEFKKALEEL 89 (151)
T ss_dssp CSCCSHHHHHHHHHTSSCSSCCSSEEEHHHHHHHHHHTSCCCSSSSCHHHHHHHHHHHSCSSCSEEEHHHHHHHHHHT
T ss_pred ccHHHHHHHHHHHHhcccCCcccccCCHHHHHHHHHHCCCCcCCCCChhhcceehheeccCccceecHHHHHHHHHHH
Confidence 3556899999999963 2235799999999999999875 222 22223335666666779999999998875
No 293
>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4
Probab=59.24 E-value=46 Score=23.79 Aligned_cols=65 Identities=9% Similarity=0.049 Sum_probs=47.0
Q ss_pred cccHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHH-hhcccccccccHHHHHHHHHHh
Q psy9055 58 SVDRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAW-RFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 58 ~~~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~-~l~a~~~g~~tr~eF~~g~~~l 128 (284)
.++...+.++|..+- ..+.|+.+.+..++. ..++...-+.-++ .+-...-|.|+++||...+..+
T Consensus 6 ~~~~~e~~~~~~~~d---~~g~i~~~eF~~~~~---~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~ 71 (109)
T 1bu3_A 6 ILADADVAAALKACE---AADSFNYKAFFAKVG---LTAKSADDIKKAFFVIDQDKSGFIEEDELKLFLQVF 71 (109)
T ss_dssp SSCHHHHHHHHHHTC---STTCCCHHHHHHHHT---GGGSCHHHHHHHHHHHCTTCSSSEEHHHHHTHHHHH
T ss_pred cCCHHHHHHHHHHhC---CCCcCcHHHHHHHHH---cChhhHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHH
Confidence 346788999999985 235799998888774 2334444444443 4556678999999999999988
No 294
>1eg3_A Dystrophin; EF-hand like domain, WW domain, structural protein; 2.00A {Homo sapiens} SCOP: a.39.1.7 a.39.1.7 b.72.1.1 PDB: 1eg4_A
Probab=58.03 E-value=22 Score=31.75 Aligned_cols=65 Identities=12% Similarity=-0.021 Sum_probs=44.0
Q ss_pred ccHHHHHHHHHHhcCCCCCCccCHHHHHHHHHH-------cCCC----CCchHHHH--HHHhhcccccccccHHHHHHHH
Q psy9055 59 VDRKKLESLYSKYKDASEPDKILVEGIMKFLDD-------LSLS----PESKLVLI--IAWRFKAAAQCEFSRDEFMNGM 125 (284)
Q Consensus 59 ~~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~ed-------Lgv~----ped~~~Lv--La~~l~a~~~g~~tr~eF~~g~ 125 (284)
.-..++.-+|.-|.|. .+.|+-+-+..++.+ +|-. .+.+.-.| +-.+++ .-|.||.+||++|+
T Consensus 165 ~leeKL~w~F~lyDD~--~G~I~~~El~~il~~i~~i~~~vge~~~~~~~~~e~~v~~~F~~~d--~dg~It~~EFl~~~ 240 (261)
T 1eg3_A 165 HLEDKYRYLFKQVASS--TGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFAN--NKPEIEAALFLDWM 240 (261)
T ss_dssp CHHHHHHHHHHHHSCT--TSCBCHHHHHHHHHHHHHHHHHTTCGGGGTCSCCHHHHHHHHHHTT--TCSCBCHHHHHHHH
T ss_pred CHHHHHHHHHheeeCC--CCCCcHHHHHHHHHHHHHHHHhcCCcccCCCCCHHHHHHHHHHhCC--CCCcCCHHHHHHHH
Confidence 3456999999999743 368999998888865 3422 12233333 222343 56899999999998
Q ss_pred HH
Q psy9055 126 LE 127 (284)
Q Consensus 126 ~~ 127 (284)
+.
T Consensus 241 ~~ 242 (261)
T 1eg3_A 241 RL 242 (261)
T ss_dssp HT
T ss_pred Hh
Confidence 76
No 295
>1pul_A Hypothetical protein C32E8.3 in chromosome I; alpha helical, northeast structural genomics consortium, PSI, protein structure initiative; NMR {Caenorhabditis elegans} SCOP: a.39.1.11
Probab=57.78 E-value=54 Score=26.20 Aligned_cols=68 Identities=10% Similarity=0.122 Sum_probs=49.0
Q ss_pred cHHHHHHHHHHhcCCC--CCCccCHHHHHHHHHHcCCCC-Cch---HHHHHHHhhcccccccccHHHHHHHHHHh
Q psy9055 60 DRKKLESLYSKYKDAS--EPDKILVEGIMKFLDDLSLSP-ESK---LVLIIAWRFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 60 ~~~~l~~lFd~Y~d~~--~~~~I~~dG~~~~~edLgv~p-ed~---~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 128 (284)
+.+.|+++|..|..-. ....|+...+.++|.|.||=. -.+ -+=++--++ +..-..|+=++|+..+..+
T Consensus 20 ~~~~L~~~F~~Fa~fG~~~~~~M~~k~f~K~~kD~~lidgk~iT~TdvDIiF~Kv-~k~~r~I~f~qF~~aL~~l 93 (125)
T 1pul_A 20 DDADVKKRWDAFTKFGAATATEMTGKNFDKWLKDAGVLDNKAITGTMTGIAFSKV-TGPKKKATFDETKKVLAFV 93 (125)
T ss_dssp CHHHHHHHHHHHHHHTCSSSSCCCHHHHHHHHHHHTSCCSSSSCHHHHHHHHHHH-TCSSSCCCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhcCCCccccCcHHHHHHHHHHCCCCCCCCCCccccceeehcc-cCCcceecHHHHHHHHHHH
Confidence 5678999999998421 126799999999999999875 222 221222345 5556779999999998885
No 296
>4ae4_A Ubiquitin-associated protein 1; protein transport, endosomal sorting, tetherin, VPU, HIV-1, monoubiquitin; HET: NHE; 1.65A {Homo sapiens} PDB: 4ae4_B*
Probab=56.05 E-value=16 Score=28.82 Aligned_cols=36 Identities=11% Similarity=0.055 Sum_probs=30.3
Q ss_pred HHHHHHhhhCCCHHHHHHHHHhCCCChHHHHHhhcCC
Q psy9055 11 KVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQN 47 (284)
Q Consensus 11 ~i~qF~~iT~~s~~~A~~~L~~~~w~l~~A~~~fy~~ 47 (284)
.|.+|+++ |-++..|+.-|..++.|++.|++-.+..
T Consensus 79 ~v~~L~eM-GF~~~~a~~AL~~~~nd~erAlewL~~~ 114 (118)
T 4ae4_A 79 LMSKFKEM-GFELKDIKEVLLLHNNDQDNALEDLMAR 114 (118)
T ss_dssp HHHHHHHT-TCCHHHHHHHHHHTTTCHHHHHHHHHHH
T ss_pred HHHHHHHc-CCCHHHHHHHHHHcCCCHHHHHHHHHHh
Confidence 46666664 7999999999999999999999987643
No 297
>2juj_A E3 ubiquitin-protein ligase CBL; alpha helix, UBA domain, calcium, cytoplasm, metal- binding, phosphorylation, proto-oncogene, SH2 domain; NMR {Homo sapiens}
Probab=55.56 E-value=21 Score=24.72 Aligned_cols=36 Identities=8% Similarity=0.078 Sum_probs=30.9
Q ss_pred HHHHHHHHhhhCCCHHHHHHHHHhCCCChHHHHHhhc
Q psy9055 9 KDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYF 45 (284)
Q Consensus 9 ~~~i~qF~~iT~~s~~~A~~~L~~~~w~l~~A~~~fy 45 (284)
.+.|.+.|++ |-+...|++-|..++.|++.|.|-..
T Consensus 8 e~~Ia~L~sm-Gfsr~da~~AL~ia~Ndv~~AtNiLl 43 (56)
T 2juj_A 8 SSEIENLMSQ-GYSYQDIQKALVIAQNNIEMAKNILR 43 (56)
T ss_dssp HHHHHHHHTT-TCCHHHHHHHHHHTTTCSHHHHHHHH
T ss_pred hHHHHHHHHc-CCCHHHHHHHHHHhcccHHHHHHHHH
Confidence 4568888874 89999999999999999999988654
No 298
>2lva_A Ubiquitin carboxyl-terminal hydrolase 28; UIM, ubiquitin interacting motif, UBA domain, NESG, northeas structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=59.47 E-value=2.6 Score=33.97 Aligned_cols=41 Identities=7% Similarity=-0.006 Sum_probs=34.4
Q ss_pred hHHHHHHHHhhhCCCH-HHHHHHHHhCCCChHHHHHhhcCCC
Q psy9055 8 QKDKVKRFISFTQTGE-LTAINCLSQNDWKLDLASDNYFQNP 48 (284)
Q Consensus 8 ~~~~i~qF~~iT~~s~-~~A~~~L~~~~w~l~~A~~~fy~~~ 48 (284)
.+-.++|..+|||..+ ..-.+.|++++.||..||.-+=+.+
T Consensus 18 ~Q~lLNQLrEITGIqD~~~L~~ALkAsnGdl~qAV~~LT~~~ 59 (129)
T 2lva_A 18 GQMLLNQLREITGIQDPSFLHEALKASNGDITQAVSLLTDER 59 (129)
Confidence 3446899999999985 6788999999999999998776553
No 299
>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A
Probab=53.79 E-value=41 Score=24.01 Aligned_cols=64 Identities=8% Similarity=0.104 Sum_probs=46.4
Q ss_pred ccHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHH-hhcccccccccHHHHHHHHHHh
Q psy9055 59 VDRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAW-RFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 59 ~~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~-~l~a~~~g~~tr~eF~~g~~~l 128 (284)
++...+.++|..+- ..+.|+.+-+.+++. ..++....+.-++ .+-...-|.|++++|...++.+
T Consensus 6 ~t~~e~~~~~~~~d---~~g~i~~~eF~~~~~---~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~ 70 (109)
T 1rwy_A 6 LSAEDIKKAIGAFT---AADSFDHKKFFQMVG---LKKKSADDVKKVFHILDKDKSGFIEEDELGSILKGF 70 (109)
T ss_dssp SCHHHHHHHHHTTC---STTCCCHHHHHHHHT---GGGSCHHHHHHHHHHHSTTCSSEECHHHHHTHHHHH
T ss_pred CCHHHHHHHHHHcC---CCCcEeHHHHHHHHh---cCcchHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHH
Confidence 45688999999985 235799988888773 3334444444443 4556678999999999999998
No 300
>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4
Probab=53.63 E-value=58 Score=23.23 Aligned_cols=64 Identities=9% Similarity=0.185 Sum_probs=46.4
Q ss_pred ccHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHH-hhcccccccccHHHHHHHHHHh
Q psy9055 59 VDRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAW-RFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 59 ~~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~-~l~a~~~g~~tr~eF~~g~~~l 128 (284)
.+.+.+.++|..+-. .+.|+.+-+..++. .......-+.-++ .+-...-|.|+++|+...++.+
T Consensus 6 ~s~~ei~~~~~~~d~---~g~i~~~eF~~~~~---~~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~ 70 (109)
T 5pal_A 6 LKADDINKAISAFKD---PGTFDYKRFFHLVG---LKGKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGF 70 (109)
T ss_dssp SCHHHHHHHHHHTCS---TTCCCHHHHHHHHT---CTTCCHHHHHHHHHHHCTTCSSEECHHHHHTHHHHH
T ss_pred CCHHHHHHHHHHhCC---CCcCcHHHHHHHHh---hccCcHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHH
Confidence 467889999999853 36798887777664 3444444444443 5556678999999999999987
No 301
>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A
Probab=52.43 E-value=58 Score=23.18 Aligned_cols=64 Identities=8% Similarity=0.013 Sum_probs=46.1
Q ss_pred ccHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHH-hhcccccccccHHHHHHHHHHh
Q psy9055 59 VDRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAW-RFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 59 ~~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~-~l~a~~~g~~tr~eF~~g~~~l 128 (284)
++...+.++|..+- ..+.|+.+-...++.- .+....-+.-++ .+-...-|.|++++|...++.+
T Consensus 6 ~~~~e~~~l~~~~d---~~g~i~~~eF~~~~~~---~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~ 70 (108)
T 2pvb_A 6 LKDADVAAALAACS---AADSFKHKEFFAKVGL---ASKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNF 70 (108)
T ss_dssp SCHHHHHHHHHHTC---STTCCCHHHHHHHHTG---GGSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGT
T ss_pred CCHHHHHHHHHHhC---CCCcCcHHHHHHHHhC---ChhHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHH
Confidence 46788999999885 2357999988888742 333344444333 4556678999999999999887
No 302
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=50.64 E-value=15 Score=34.67 Aligned_cols=67 Identities=13% Similarity=0.113 Sum_probs=49.2
Q ss_pred cHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCC--------CCchHHHHHHHhhcccccccccHHHHHHHHHH
Q psy9055 60 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLS--------PESKLVLIIAWRFKAAAQCEFSRDEFMNGMLE 127 (284)
Q Consensus 60 ~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~--------ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~ 127 (284)
..+.+.++|+.+ |.+..+.|+.+-+...+..+|.+ +....+--+...+....-|.|+.+||+..+..
T Consensus 344 ~~~~l~~~F~~~-D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~~G~I~~~EF~~~~~~ 418 (494)
T 3lij_A 344 ETKELTDIFRHI-DKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNGYIDYSEFVTVAMD 418 (494)
T ss_dssp HHHHHHHHHHHH-CTTCSSEECHHHHHHTTHHHHSSCCCCC--CHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHSC
T ss_pred HHHHHHHHHHHh-CcCCCCeEcHHHHHHHHHHhcccccccccccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence 345788889888 44455899999999999999754 22334444555566677899999999998754
No 303
>1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A
Probab=50.17 E-value=30 Score=24.77 Aligned_cols=65 Identities=11% Similarity=0.111 Sum_probs=46.8
Q ss_pred ccHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHH-hhcccccccccHHHHHHHHHHhC
Q psy9055 59 VDRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAW-RFKAAAQCEFSRDEFMNGMLELG 129 (284)
Q Consensus 59 ~~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~-~l~a~~~g~~tr~eF~~g~~~l~ 129 (284)
++.+.+.++|..+- ..+.|+.+-+..++. ..+....-+.-++ .+-...-|.|+++||...+..++
T Consensus 6 ~t~~e~~~~~~~~d---~~g~i~~~eF~~~~~---~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~ 71 (108)
T 1rro_A 6 LSAEDIAAALQECQ---DPDTFEPQKFFQTSG---LSKMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQ 71 (108)
T ss_dssp SCHHHHHHHHHHTC---STTCCCHHHHHHHHS---GGGSCHHHHHHHHHHHCTTCSSEECTHHHHTGGGGTC
T ss_pred CCHHHHHHHHHHcc---CCCCcCHHHHHHHHh---cCcccHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHh
Confidence 46789999999984 236799999888874 3334444444333 45566789999999999998874
No 304
>2di0_A Activating signal cointegrator 1 complex subunit 2; ASCC2, CUE domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.5.2.4
Probab=50.14 E-value=35 Score=24.74 Aligned_cols=41 Identities=12% Similarity=0.244 Sum_probs=35.3
Q ss_pred hHHHHHHHHhhh-CCCHHHHHHHHHhCCCChHHHHHhhcCCC
Q psy9055 8 QKDKVKRFISFT-QTGELTAINCLSQNDWKLDLASDNYFQNP 48 (284)
Q Consensus 8 ~~~~i~qF~~iT-~~s~~~A~~~L~~~~w~l~~A~~~fy~~~ 48 (284)
-.+.|.|-.++. ...+....++|+.++.|.|.++++.+++.
T Consensus 13 l~s~I~qV~DLfPdLG~gfi~~~L~~y~~nvE~vin~LLE~~ 54 (71)
T 2di0_A 13 LDSLISQVKDLLPDLGEGFILACLEYYHYDPEQVINNILEER 54 (71)
T ss_dssp HHHHHHHHHHHCCSSCHHHHHHHHHHTTTCHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHcccCCHHHHHHHHHHhCCCHHHHHHHHHccC
Confidence 456788888887 55889999999999999999999999874
No 305
>1oqy_A HHR23A, UV excision repair protein RAD23 homolog A; DNA repair, proteasome-mediated degradation, protein- protein interaction, replication; NMR {Homo sapiens} SCOP: a.5.2.1 a.5.2.1 a.189.1.1 d.15.1.1 PDB: 1qze_A 1tp4_A
Probab=49.84 E-value=15 Score=34.56 Aligned_cols=39 Identities=8% Similarity=0.043 Sum_probs=34.5
Q ss_pred hHHHHHHHHhhhCCCHHHHHHHHHhCCCChHHHHHhhcCC
Q psy9055 8 QKDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNYFQN 47 (284)
Q Consensus 8 ~~~~i~qF~~iT~~s~~~A~~~L~~~~w~l~~A~~~fy~~ 47 (284)
..+.|++.+++ |-+++.|++.|.+++||++.|++-.|..
T Consensus 168 ~~~~i~~l~~M-Gf~~~~~~~AL~a~~nn~~~A~e~L~~g 206 (368)
T 1oqy_A 168 YETMLTEIMSM-GYERERVVAALRASYNNPHRAVEYLLTG 206 (368)
T ss_dssp HHHHHHHHHTT-TCCSHHHHHHHHHSCSSTTHHHHTTTTS
T ss_pred hHHHHHHHHHc-CCCHHHHHHHHHHcCCCHHHHHHHHHhC
Confidence 46678888875 8999999999999999999999998854
No 306
>2oo9_A E3 ubiquitin-protein ligase CBL; alpha-helical domain, homodimer; 2.10A {Homo sapiens}
Probab=49.67 E-value=31 Score=22.93 Aligned_cols=35 Identities=9% Similarity=0.111 Sum_probs=28.8
Q ss_pred HHHHHHHHhhhCCCHHHHHHHHHhCCCChHHHHHhh
Q psy9055 9 KDKVKRFISFTQTGELTAINCLSQNDWKLDLASDNY 44 (284)
Q Consensus 9 ~~~i~qF~~iT~~s~~~A~~~L~~~~w~l~~A~~~f 44 (284)
...|+..++. |-+.+.|++-|..++.|++.|.|-.
T Consensus 5 e~~I~~L~s~-Gf~~~~~~rAL~ia~Nnie~A~nIL 39 (46)
T 2oo9_A 5 SSEIENLMSQ-GYSYQDIQKALVIAQNNIEMAKNIL 39 (46)
T ss_dssp HHHHHHHHHT-TBCHHHHHHHHHHTTTCHHHHHHHH
T ss_pred HHHHHHHHHc-CCCHHHHHHHHHHhhccHHHHHHHH
Confidence 3456666663 8899999999999999999998864
No 307
>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A
Probab=47.30 E-value=59 Score=23.18 Aligned_cols=64 Identities=11% Similarity=0.093 Sum_probs=46.3
Q ss_pred ccHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHH-hhcccccccccHHHHHHHHHHh
Q psy9055 59 VDRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAW-RFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 59 ~~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~-~l~a~~~g~~tr~eF~~g~~~l 128 (284)
.....+.++|..+- ..+.|+.+-+..++.. .+....-+.-++ .+-...-|.|+++|+...+..+
T Consensus 7 ~~~~ei~~~~~~~D---~~g~i~~~eF~~~~~~---~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~ 71 (109)
T 3fs7_A 7 LSAKDIESALSSCQ---AADSFNYKSFFSTVGL---SSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNF 71 (109)
T ss_dssp SCHHHHHHHHHHTC---STTCCCHHHHHHHHTC---TTCCHHHHHHHHHHHSTTCSSSBCHHHHHTTGGGT
T ss_pred CCHHHHHHHHHhcC---CCCcCcHHHHHHHHhc---CCCcHHHHHHHHHHHCCCCCCeEeHHHHHHHHHHH
Confidence 46789999999994 2467998887777643 444444444333 4556678999999999988887
No 308
>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana}
Probab=46.99 E-value=10 Score=29.26 Aligned_cols=66 Identities=9% Similarity=0.029 Sum_probs=27.3
Q ss_pred HHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHH-hhcccccccccHHHHHHHHHHhCC
Q psy9055 64 LESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAW-RFKAAAQCEFSRDEFMNGMLELGC 130 (284)
Q Consensus 64 l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~-~l~a~~~g~~tr~eF~~g~~~l~~ 130 (284)
+.++|..+- .+..+.|+.+-+..++...--......-+.-++ .+-...-|.|+++||...++.+|.
T Consensus 5 ~~~l~~~~D-~d~~G~I~~~EF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~ 71 (135)
T 3h4s_E 5 EKSMLLETT-STTKMETKYEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAESLRRNSGILGI 71 (135)
T ss_dssp ---------------CCCC-----------CHHHHHHHHHHHHHHHSBTTTTBBCHHHHHHHGGGGTC
T ss_pred HHHHHHHHc-CCCCCcEeHHHHHHHHHHHccccchHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCC
Confidence 345666663 334467888887777654322222223333333 445667899999999999999884
No 309
>2boy_A 3-chlorocatechol 1,2-dioxygenase; beta barrel, oxidoreductase; HET: BHO LPP; 1.9A {Rhodococcus opacus}
Probab=45.57 E-value=34 Score=30.57 Aligned_cols=51 Identities=16% Similarity=0.403 Sum_probs=42.5
Q ss_pred cHHHHHHHHHhhccCCCChhhhHHHHHHHhhcccCCCCCCcCCCchHhHHHHHHHhhHhhh
Q psy9055 214 FLHLWCTFLQEHHKRSIPKDTWNLLLDFATATNEDMSNYDEEGAWPVLIDDFVEWAQPQVK 274 (284)
Q Consensus 214 ~l~~W~~FL~~~~~k~IskD~W~~~l~F~~~~~~dls~YDe~~AWP~liDeFVe~~r~~~~ 274 (284)
++..--+|+++.. +|-|.|..-++|+..+. ..+-|+.|+|-||+-+.....
T Consensus 13 lv~hlh~f~re~~---lT~~E~~~~i~~l~~~G-------~r~E~~Lll~~lvd~~~~~~~ 63 (254)
T 2boy_A 13 MIAAINAVIKDEK---VSYSEYKASTGWLISVG-------EKNEWPLFLDVFFEHAIESVA 63 (254)
T ss_dssp HHHHHHHHHHHHT---CCHHHHHHHHHHHHHHH-------HTTCHHHHHHHHTHHHHHHHH
T ss_pred HHHHHHHHHHHhC---CCHHHHHHHHHHHHHHh-------hcCcHHHHHHHHHHHHhcccc
Confidence 4556667887764 99999999999999988 678999999999998887643
No 310
>1olm_A SEC14-like protein 2; lipid-binding protein, cholesterol biosynthesis, oxidized vitamin E, lipid-binding, transport, transcription regulation; HET: VTQ; 1.95A {Homo sapiens} SCOP: a.5.3.1 b.132.1.1 c.13.1.1 PDB: 1o6u_A* 1olm_E*
Probab=43.80 E-value=29 Score=32.16 Aligned_cols=42 Identities=14% Similarity=0.249 Sum_probs=35.6
Q ss_pred CCCcchHHHHHHHHhhh--------CCCHHHHHHHHHhCCCChHHHHHhh
Q psy9055 3 KLKSSQKDKVKRFISFT--------QTGELTAINCLSQNDWKLDLASDNY 44 (284)
Q Consensus 3 ~l~~~~~~~i~qF~~iT--------~~s~~~A~~~L~~~~w~l~~A~~~f 44 (284)
.|+..|++.|++|.+.. ..++..-.+||.+.+||++.|...+
T Consensus 7 ~l~~~q~~~l~~lr~~l~~~~~~l~~~dD~~LlRFLrarkfdv~~A~~~l 56 (403)
T 1olm_A 7 DLSPRQKEALAKFRENVQDVLPALPNPDDYFLLRWLRARSFDLQKSEAML 56 (403)
T ss_dssp BCCHHHHHHHHHHHHHHGGGGGGSSCCCHHHHHHHHHHTTTCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHhhccCCCCCChhHHHHHHHhcCCCHHHHHHHH
Confidence 57888999999997653 3566889999999999999999876
No 311
>2zc2_A DNAD-like replication protein; GI 24377835, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.10A {Streptococcus mutans UA159}
Probab=43.30 E-value=21 Score=25.36 Aligned_cols=71 Identities=8% Similarity=0.073 Sum_probs=44.6
Q ss_pred HHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhh--cccccccccHHHHHHHHHHhCCCcHHHHH
Q psy9055 63 KLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRF--KAAAQCEFSRDEFMNGMLELGCDSIEKLK 137 (284)
Q Consensus 63 ~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l--~a~~~g~~tr~eF~~g~~~l~~~si~~lk 137 (284)
.+-..|+++... -...+..+-+..++++.|++++ ++...+-+-+ +..++..+ +.-+..|++-|+.|+++.+
T Consensus 5 ~l~~~~e~~~gr-~ls~~e~~~i~~w~~~~~~~~e-lI~~A~~~a~~~~~~s~~Yi--~~Il~~W~~~gi~T~e~a~ 77 (78)
T 2zc2_A 5 ALVEDFERELGR-MLSPFELEDLQKTVSDDKTDPD-LVRSALREAVFNGKTNWNYI--QAILRNWRHEGISTLRQVE 77 (78)
T ss_dssp HHHHHHHHHHTS-CCCHHHHHHHHHHHTTTCCCHH-HHHHHHHHHHHHTCCCHHHH--HHHHHHHHHTTCCSHHHHC
T ss_pred HHHHHHHHHhCC-CCCHHHHHHHHHHHHHhCCCHH-HHHHHHHHHHHcCCCCHHHH--HHHHHHHHHcCCCCHHHHh
Confidence 445556655431 1234677888899999998876 4333333333 33343333 4578889999999998764
No 312
>2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A
Probab=40.05 E-value=11 Score=29.71 Aligned_cols=65 Identities=9% Similarity=0.034 Sum_probs=45.1
Q ss_pred cHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHc------CCCCCchHHHHHH---------HhhcccccccccHHHHHHH
Q psy9055 60 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDL------SLSPESKLVLIIA---------WRFKAAAQCEFSRDEFMNG 124 (284)
Q Consensus 60 ~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edL------gv~ped~~~LvLa---------~~l~a~~~g~~tr~eF~~g 124 (284)
..+.+.++|..| |.+..+.|+.+-+.+.+..+ |+.|....+-.+. ..+....-|.|+.+| ..
T Consensus 12 ~~~~l~~~F~~~-D~d~dG~i~~~El~~~l~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~f~~~D~d~dg~I~~~E--~~ 88 (186)
T 2hps_A 12 HLRKMKTRMQRV-DVTGDGFISREDYELIAVRIAKIAKLSAEKAEETRQEFLRVADQLGLAPGVRISVEEAAVNAT--DS 88 (186)
T ss_dssp HHHHHHHHHHTT-CTTCSSEEEHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHTCCTTCEEEHHHHHHHHH--HH
T ss_pred HHHHHHHHhhhc-CCCCCCccCHHHHHHHHHHHHHHHHcCCCCCcHHHHHHHHHHHHHHHHHhcCCCCCCcccHHH--HH
Confidence 346788899988 44455789999999999876 8887665554443 334445568888888 44
Q ss_pred HHH
Q psy9055 125 MLE 127 (284)
Q Consensus 125 ~~~ 127 (284)
+..
T Consensus 89 ~~~ 91 (186)
T 2hps_A 89 LLK 91 (186)
T ss_dssp HHH
T ss_pred HHH
Confidence 444
No 313
>2ld7_B Paired amphipathic helix protein SIN3A; transcription; NMR {Mus musculus}
Probab=37.25 E-value=65 Score=23.21 Aligned_cols=55 Identities=11% Similarity=0.193 Sum_probs=44.9
Q ss_pred hHHHHhhChhhHHHHHhhhhhcccCCCCCCCCHHHHHHHHHHhhcCCcccHHHHHHHHH
Q psy9055 165 SLEAELKDNLKFKDFYQFTFNYAKNPGQKGLDLDMAITYWNIVLQGRFKFLHLWCTFLQ 223 (284)
Q Consensus 165 ~l~~~l~d~~~Fk~~Y~f~F~~~k~~~qk~l~~etAi~~W~lll~~~~~~l~~W~~FL~ 223 (284)
.++..+.+++.+.+|-+-.--|. |..|+..+-+..=..+|+++.++++.|.+||.
T Consensus 17 kVK~~l~~~~~Y~eFLk~lnlf~----q~~Id~~eLv~~V~~~lg~~pdL~~~Fk~Fl~ 71 (75)
T 2ld7_B 17 KVRKALRSAEAYENFLRCLVIFN----QEVISRAELVQLVSPFLGKFPELFNWFKNFLG 71 (75)
T ss_dssp HHHHHHCSHHHHHHHHHHHHHHH----TTCSCHHHHHHHTHHHHTTCHHHHHHHHHHHT
T ss_pred HHHHHcCCHHHHHHHHHHHHHhh----hcCcCHHHHHHHHHHHHccCHHHHHHHHHHcC
Confidence 45556667888888777666666 77899999999999999988899999999984
No 314
>1ufz_A Hypothetical protein BAB28515; HBS1-like domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, translatio; NMR {Mus musculus} SCOP: a.5.9.1
Probab=35.79 E-value=29 Score=25.90 Aligned_cols=45 Identities=4% Similarity=0.101 Sum_probs=35.3
Q ss_pred CCcchHHH----HHHHHhhhC--CCHHHHHHHHHhCCCChHHHHHhhcCCC
Q psy9055 4 LKSSQKDK----VKRFISFTQ--TGELTAINCLSQNDWKLDLASDNYFQNP 48 (284)
Q Consensus 4 l~~~~~~~----i~qF~~iT~--~s~~~A~~~L~~~~w~l~~A~~~fy~~~ 48 (284)
|+..++.+ +.|..++.| +++.+-+..-=++++|++.|++.+++.+
T Consensus 26 Ls~~d~arL~SCLd~iR~VlGdsV~e~~Lv~ailk~dfD~ekALd~vL~~~ 76 (83)
T 1ufz_A 26 LSEIDQARLYSCLDHMREVLGDAVPDDILTEAILKHKFDVQKALSVVLEQD 76 (83)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTTTSCHHHHHHHHHHTTSCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHcccCCHHHHHHHHHHhcCCHHHHHHHHHhcc
Confidence 44444444 568888887 4778888888999999999999999653
No 315
>2keb_A DNA polymerase subunit alpha B; DNA polymerase alpha, DNA replication, nucleus, phosphoprote binding protein; HET: DNA; NMR {Homo sapiens}
Probab=34.47 E-value=56 Score=25.22 Aligned_cols=48 Identities=8% Similarity=0.057 Sum_probs=36.6
Q ss_pred CccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHh
Q psy9055 78 DKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 78 ~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 128 (284)
....++-|.+-++++||+|+|.++=-++.++-.=+ ++-++||.-|-+.
T Consensus 24 ~~Vsae~L~eEfdefGi~~~d~VldKc~ELC~~y~---lda~e~VeeWmAF 71 (101)
T 2keb_A 24 MSASAQQLAEELQIFGLDCEEALIEKLVELCVQYG---QNEEGMVGELIAF 71 (101)
T ss_dssp CCCCHHHHHHHHHHHTCBCCHHHHHHHHHHHHHHT---CCHHHHHHHHHHH
T ss_pred hhccHHHHHHHHHHcCCCCCHHHHHHHHHHHHHcC---CCHHHHHHHHHHH
Confidence 34688999999999999999965544555554422 5789999999997
No 316
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=33.44 E-value=55 Score=34.25 Aligned_cols=71 Identities=10% Similarity=0.177 Sum_probs=48.7
Q ss_pred cHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCC----------CchHHHHHHHhhccc----ccccccHHHHHHHH
Q psy9055 60 DRKKLESLYSKYKDASEPDKILVEGIMKFLDDLSLSP----------ESKLVLIIAWRFKAA----AQCEFSRDEFMNGM 125 (284)
Q Consensus 60 ~~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~p----------ed~~~LvLa~~l~a~----~~g~~tr~eF~~g~ 125 (284)
.++.|..+|..|.. ++.+.|+.+.+.+|+.+.+-++ ..-.+.-|....... .-|.++.++|+.-|
T Consensus 221 ~R~EI~eiF~~yds-d~~g~mT~~EL~~FL~~~Q~e~~~~e~~~~~~t~e~~~~iI~k~e~~~~~~~~g~LsldgF~~yL 299 (885)
T 3ohm_B 221 LRPDIDKILLEIGA-KGKPYLTLEQLMDFINQKQRDPRLNEVLYPPLRPSQARLLIEKYEPNQQFLERDQMSMEGFSRYL 299 (885)
T ss_dssp CCHHHHHHHHHTTC-CSTTCEEHHHHHHHHHHHSSCTTSCTTTSCCCCHHHHHHHHHHHCCCHHHHHTTEECHHHHHHHH
T ss_pred CHHHHHHHHHHHhc-CCCCccCHHHHHHHHHHhcCcccccccccccCCHHHHHHHHHHhcCChhhhccCccchhhhhhhc
Confidence 35789999999943 2346899999999999996442 112223333333322 46889999999999
Q ss_pred HHhCCC
Q psy9055 126 LELGCD 131 (284)
Q Consensus 126 ~~l~~~ 131 (284)
..-.+.
T Consensus 300 ~S~~~~ 305 (885)
T 3ohm_B 300 GGEENG 305 (885)
T ss_dssp TSTTSC
T ss_pred cCcccC
Confidence 876554
No 317
>2kld_A Polycystin-2; PC2, PKD2, calcium binding domain, EF hand, cytosolic, calcium, coiled coil, disease mutation, glycoprotein, ION transport; NMR {Homo sapiens} PDB: 2kle_A 2kq6_A 2y4q_A
Probab=32.73 E-value=9.9 Score=29.30 Aligned_cols=59 Identities=10% Similarity=0.071 Sum_probs=40.9
Q ss_pred HHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHhC
Q psy9055 64 LESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLELG 129 (284)
Q Consensus 64 l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~ 129 (284)
+.+.|..| | +.|+.+-+.+.+..+|. .+..+--+...+....-|.|+.+||+.-+..+.
T Consensus 52 l~~aF~~f-D----G~I~~~El~~~l~~lG~--t~~ei~~~~~~~D~d~dG~I~~~EF~~~~~~~~ 110 (123)
T 2kld_A 52 ISESLRQG-G----GKLNFDELRQDLKGKGH--TDAEIEAIFTKYDQDGDQELTEHEHQQMRDDLE 110 (123)
T ss_dssp CSCSSTTT-T----TCEEHHHHHHHTTTCCS--SHHHHHHHHHHHSSSSCCEECSHHHHHCSCTTT
T ss_pred HHHHHHHh-C----CCCCHHHHHHHHHHhCC--CHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHH
Confidence 44445554 2 68999999999999998 223333344445566679999999998876654
No 318
>3c5t_B Exendin-4, exenatide; ligand-bound G protein-coupled receptor extracellular domain protein coupled receptor, glycoprotein, membrane; HET: 10M; 2.10A {Homo sapiens} SCOP: j.6.1.1 PDB: 3c59_B*
Probab=32.34 E-value=18 Score=22.19 Aligned_cols=10 Identities=30% Similarity=0.870 Sum_probs=8.4
Q ss_pred HHHHHHHhhH
Q psy9055 262 IDDFVEWAQP 271 (284)
Q Consensus 262 iDeFVe~~r~ 271 (284)
.-|||+|+..
T Consensus 11 akdFv~WL~n 20 (31)
T 3c5t_B 11 VRLFIEWLKN 20 (31)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHh
Confidence 5689999985
No 319
>1p3q_Q VPS9P, vacuolar protein sorting-associated protein VPS9; trafficking, post translational modification, mono- ubiquitination; 1.70A {Saccharomyces cerevisiae} SCOP: a.5.2.4 PDB: 1mn3_A
Probab=30.12 E-value=29 Score=23.80 Aligned_cols=40 Identities=8% Similarity=0.074 Sum_probs=29.2
Q ss_pred chHHHHHHHHhhhC-CCHHHHHHHHHhCCCChHHHHHhhcC
Q psy9055 7 SQKDKVKRFISFTQ-TGELTAINCLSQNDWKLDLASDNYFQ 46 (284)
Q Consensus 7 ~~~~~i~qF~~iT~-~s~~~A~~~L~~~~w~l~~A~~~fy~ 46 (284)
.+++.++++.++.. .+.++-..-|.+++++++.|||+..+
T Consensus 11 e~~~~~~~L~~MFP~lD~evI~~Vl~a~~G~~~~~IdaLLq 51 (54)
T 1p3q_Q 11 ERKDTLNTLQNMFPDMDPSLIEDVCIAAASRIGPCVDALLS 51 (54)
T ss_dssp HHHHHHHHHHHHSTTSCHHHHHHHHHHSCC--CGGGC----
T ss_pred HHHHHHHHHHHHcccCCHHHHHHHHHHcCCCHHHHHHHHHh
Confidence 35677899999885 47799999999999999999987653
No 320
>2kld_A Polycystin-2; PC2, PKD2, calcium binding domain, EF hand, cytosolic, calcium, coiled coil, disease mutation, glycoprotein, ION transport; NMR {Homo sapiens} PDB: 2kle_A 2kq6_A 2y4q_A
Probab=29.01 E-value=5.1 Score=31.04 Aligned_cols=73 Identities=10% Similarity=0.130 Sum_probs=23.1
Q ss_pred cHHHHHHHHHHhcCCCCCCccCHHHHHH-----HHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHhCCCcHH
Q psy9055 60 DRKKLESLYSKYKDASEPDKILVEGIMK-----FLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLELGCDSIE 134 (284)
Q Consensus 60 ~~~~l~~lFd~Y~d~~~~~~I~~dG~~~-----~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l~~~si~ 134 (284)
....+.+++..+ .+.|+.+.... ++.....+++...-|.-|. ..-- |.|+.+++...++.+|. |-+
T Consensus 10 t~~ei~~~~~~~-----~g~i~f~EF~~~~~~~~~~~~~~~~~~~~~l~~aF--~~fD-G~I~~~El~~~l~~lG~-t~~ 80 (123)
T 2kld_A 10 TYSEVKSDLAQQ-----KAEMELSDLIRKGYHKALVKLKLKKNTVDDISESL--RQGG-GKLNFDELRQDLKGKGH-TDA 80 (123)
T ss_dssp ----------------------------------------------CCSCSS--TTTT-TCEEHHHHHHHTTTCCS-SHH
T ss_pred CHHHHHHHHHHc-----CCCccHHHHHhHhHHHHHHHhhcChhHHHHHHHHH--HHhC-CCCCHHHHHHHHHHhCC-CHH
Confidence 345667777655 24577777766 5554433333222121111 1111 99999999999999987 666
Q ss_pred HHHhhcc
Q psy9055 135 KLKMRLP 141 (284)
Q Consensus 135 ~lk~~l~ 141 (284)
+++..+.
T Consensus 81 ei~~~~~ 87 (123)
T 2kld_A 81 EIEAIFT 87 (123)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6555443
No 321
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=28.24 E-value=1.1e+02 Score=30.55 Aligned_cols=67 Identities=21% Similarity=0.388 Sum_probs=46.1
Q ss_pred HHHHHHHHHHhcCCCCCCccCHHHHHHHHHHc-CCC-CCchHHHHHHHhhccc----ccccccHHHHHHHHHHhC
Q psy9055 61 RKKLESLYSKYKDASEPDKILVEGIMKFLDDL-SLS-PESKLVLIIAWRFKAA----AQCEFSRDEFMNGMLELG 129 (284)
Q Consensus 61 ~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edL-gv~-ped~~~LvLa~~l~a~----~~g~~tr~eF~~g~~~l~ 129 (284)
++.|.++|..|-. + .+.|+.+.+.+++..+ |.. ..+-.+--|...+... .-|.|+-+||++-|..-.
T Consensus 79 ~~el~~aF~~fD~-~-~G~Is~~EL~~fL~~~qge~~ls~ee~~~ii~~~d~d~~~~~dG~Is~deF~~~L~s~~ 151 (624)
T 1djx_A 79 RAEIDRAFEEAAG-S-AETLSVERLVTFLQHQQREEEAGPALALSLIERYEPSETAKAQRQMTKDGFLMYLLSAD 151 (624)
T ss_dssp CHHHHHHHHHHHT-T-SSSEEHHHHHHHHHHTSCCSSCSHHHHHHHHHHHCCCHHHHHTTEECHHHHHHHHHSTT
T ss_pred HHHHHHHHHHhcC-C-CCeecHHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCChhhccCCCCCHHHHHHHhcCcc
Confidence 4679999999965 2 4789999999999976 544 3332222222323222 469999999999988644
No 322
>3q8k_A Flap endonuclease 1; helix-3 turn-helix, hydrophobic wedge, 3' flap binding site, hydrolase-DNA complex, DNA repair, replication; HET: DNA; 2.20A {Homo sapiens} PDB: 3q8l_A* 3q8m_A*
Probab=25.64 E-value=2.3e+02 Score=25.79 Aligned_cols=85 Identities=13% Similarity=0.181 Sum_probs=53.7
Q ss_pred HHHHHHHHhhhC---------CCHHHHHHHHHhCCCChHHHHHhhcCCCccchhccCCcccHHHHHHHHHHhcCCCCC--
Q psy9055 9 KDKVKRFISFTQ---------TGELTAINCLSQNDWKLDLASDNYFQNPSAYYKEQKSSVDRKKLESLYSKYKDASEP-- 77 (284)
Q Consensus 9 ~~~i~qF~~iT~---------~s~~~A~~~L~~~~w~l~~A~~~fy~~~~~~~~~~~~~~~~~~l~~lFd~Y~d~~~~-- 77 (284)
.+.+-.|+.++| +-+++|.++|+.++ +|+..++..=.... .. ..........++| ...+-.++
T Consensus 219 ~~q~id~~~L~G~D~~~gipGiG~KtA~kll~~~g-sle~i~~~~~~~k~-~~---~~~~~~~~~r~l~-l~~~V~~~~~ 292 (341)
T 3q8k_A 219 QEQFVDLCILLGSDYCESIRGIGPKRAVDLIQKHK-SIEEIVRRLDPNKY-PV---PENWLHKEAHQLF-LEPEVLDPES 292 (341)
T ss_dssp HHHHHHHHHHHCCSSSCCCTTCCHHHHHHHHHHHC-SHHHHHHHSCTTTS-CC---CTTCCHHHHHHHH-HSCCCCCTTT
T ss_pred HHHHHHHHHhcCCCCCCCCCCccHHHHHHHHHHcC-CHHHHHHHHHhcCC-CC---CcccchHHHHHHh-CCCCCCCCcc
Confidence 355677787877 56799999999998 88887775432211 00 1111135577788 44321111
Q ss_pred -----CccCHHHHHHHH-HHcCCCCCch
Q psy9055 78 -----DKILVEGIMKFL-DDLSLSPESK 99 (284)
Q Consensus 78 -----~~I~~dG~~~~~-edLgv~ped~ 99 (284)
...+.+++..|+ +.+|.++|-+
T Consensus 293 ~~l~~~~pd~~~l~~fl~~~~~f~~~rv 320 (341)
T 3q8k_A 293 VELKWSEPNEEELIKFMCGEKQFSEERI 320 (341)
T ss_dssp SCCCCCCCCHHHHHHHHTTTTCCCHHHH
T ss_pred cccCCCCCCHHHHHHHHHHhcCCCHHHH
Confidence 357888888888 8888877543
No 323
>1dmh_A 1,2-CTD, catechol 1,2-dioxygenase; aromatic hydrocarbon degradation, alpha/beta FO metalloenzyme, substrate, oxidoreductase; HET: LIO; 1.70A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1dlq_A* 1dlm_A* 1dlt_A*
Probab=25.27 E-value=1.3e+02 Score=27.64 Aligned_cols=51 Identities=10% Similarity=0.165 Sum_probs=42.5
Q ss_pred ccHHHHHHHHHhhccCCCChhhhHHHHHHHhhcccCCCCCCcCCCchHh-----HHHHHHHhhHhh
Q psy9055 213 KFLHLWCTFLQEHHKRSIPKDTWNLLLDFATATNEDMSNYDEEGAWPVL-----IDDFVEWAQPQV 273 (284)
Q Consensus 213 ~~l~~W~~FL~~~~~k~IskD~W~~~l~F~~~~~~dls~YDe~~AWP~l-----iDeFVe~~r~~~ 273 (284)
.++..--+|+++.. +|-|.|..-++|+..+. ..+-|+.| ++-||+-+....
T Consensus 36 ~lv~hlh~f~re~~---lT~~Ew~~~i~fL~~~G-------~r~E~~Llsd~LGl~~lvd~~~~~~ 91 (311)
T 1dmh_A 36 RVLSDLYKAIEDLN---ITSDEYWAGVAYLNQLG-------ANQEAGLLSPGLGFDHYLDMRMDAE 91 (311)
T ss_dssp HHHHHHHHHHHHTT---CCHHHHHHHHHHHHHHH-------HTTCHHHHHHHTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhC---CCHHHHHHHHHHHHHHH-------hcCcHHHhhhhcchHHHHHHHhccc
Confidence 34666677777653 99999999999999988 67899999 999999988764
No 324
>2pjp_A Selenocysteine-specific elongation factor; SELB, protein-RNA complex, elongation factor, winged- helix, bulge, translation/RNA complex; 2.30A {Escherichia coli}
Probab=24.17 E-value=48 Score=25.40 Aligned_cols=21 Identities=24% Similarity=0.178 Sum_probs=18.6
Q ss_pred HHHHHhhhCCCHHHHHHHHHh
Q psy9055 12 VKRFISFTQTGELTAINCLSQ 32 (284)
Q Consensus 12 i~qF~~iT~~s~~~A~~~L~~ 32 (284)
+.+|.+.+|+|.+.|+.+|+-
T Consensus 83 ~ae~Rd~lg~sRK~ai~lLE~ 103 (121)
T 2pjp_A 83 AADFRDRLGVGRKLAIQILEY 103 (121)
T ss_dssp HHHHHHHHTSCHHHHHHHHHH
T ss_pred HHHHHHHHCCcHHHHHHHHHH
Confidence 789999999999999988864
No 325
>1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3
Probab=24.05 E-value=10 Score=39.22 Aligned_cols=59 Identities=12% Similarity=0.313 Sum_probs=25.1
Q ss_pred HHHhcCCCCCCccCHHHHHHHHHHcCCCCCchHHHHHHHhhcccccccccHHHHHHHHHHh
Q psy9055 68 YSKYKDASEPDKILVEGIMKFLDDLSLSPESKLVLIIAWRFKAAAQCEFSRDEFMNGMLEL 128 (284)
Q Consensus 68 Fd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~~~LvLa~~l~a~~~g~~tr~eF~~g~~~l 128 (284)
|..| |.+..+.|+.+-+.+.+..+|+.+.+-.+=.|...+. ..-|.|+.+||+..+..+
T Consensus 810 F~~~-D~d~dG~Is~~El~~~l~~~g~~ls~~~~~~l~~~~d-d~dg~Is~~EF~~~~~~l 868 (900)
T 1qxp_A 810 YKRF-ETDRSGTIGSNELPGAFEAAGFHLNQHIYSMIIRRYS-DETGNMDFDNFISCLVRL 868 (900)
T ss_dssp C-----CCSCC-------CCTTGGGTCCCCSCCCC---------CCSCCCHHHHHHHHHHH
T ss_pred HHHh-CCCCCCccCHHHHHHHHHhcCCCCCHHHHHHHHHHhc-CCCCeECHHHHHHHHHHH
Confidence 4444 3334456777777777777775544322222222333 456778888888877764
No 326
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=23.97 E-value=41 Score=34.67 Aligned_cols=68 Identities=15% Similarity=0.248 Sum_probs=37.7
Q ss_pred HHHHHHHHHHhcCCCCCCccCHHHHHHHHHHc-C-----------CCCCchHHHHHHHhhc--ccccccccHHHHHHHHH
Q psy9055 61 RKKLESLYSKYKDASEPDKILVEGIMKFLDDL-S-----------LSPESKLVLIIAWRFK--AAAQCEFSRDEFMNGML 126 (284)
Q Consensus 61 ~~~l~~lFd~Y~d~~~~~~I~~dG~~~~~edL-g-----------v~ped~~~LvLa~~l~--a~~~g~~tr~eF~~g~~ 126 (284)
++.|..+|..|-. ++.+.|+.+.+.+|+.++ | ++.+++.-++--+... ...-|.|+-+||+.-|.
T Consensus 218 r~el~~aF~~fD~-d~~g~Is~~eL~~fL~~~Qge~~~~~~~~~~~t~ee~~~iI~~~d~d~~~~~dg~is~eeF~~~L~ 296 (799)
T 2zkm_X 218 RPEIDEIFTSYHA-KAKPYMTKEHLTKFINQKQRDSRLNSLLFPPARPDQVQGLIDKYEPSGINAQRGQLSPEGMVWFLC 296 (799)
T ss_dssp CHHHHTTCC---------CCCHHHHHHHHHHTCC---------------CHHHHHHHHCCC--------CCHHHHHHHHH
T ss_pred HHHHHHHHHHhcc-CCCCeEcHHHHHHHHHHhcCCcccccccccCCCHHHHHHHHHHhhcccccccCCccchhhhhhccc
Confidence 4678888888832 234689999999999998 4 3445554444333222 11468999999999998
Q ss_pred HhC
Q psy9055 127 ELG 129 (284)
Q Consensus 127 ~l~ 129 (284)
.-.
T Consensus 297 S~~ 299 (799)
T 2zkm_X 297 GPE 299 (799)
T ss_dssp STT
T ss_pred Ccc
Confidence 643
No 327
>2ou3_A Tellurite resistance protein of COG3793; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE I3A; 1.85A {Nostoc punctiforme} SCOP: a.287.1.1
Probab=23.07 E-value=1.9e+02 Score=23.08 Aligned_cols=89 Identities=17% Similarity=0.025 Sum_probs=49.6
Q ss_pred CCCcchHHHHHHHHhhhCCCHHHHHHHHH-hCCCChHHHHHhhcCCCccchhccCCcccHH-HHHHHHHH-hcCCCCCCc
Q psy9055 3 KLKSSQKDKVKRFISFTQTGELTAINCLS-QNDWKLDLASDNYFQNPSAYYKEQKSSVDRK-KLESLYSK-YKDASEPDK 79 (284)
Q Consensus 3 ~l~~~~~~~i~qF~~iT~~s~~~A~~~L~-~~~w~l~~A~~~fy~~~~~~~~~~~~~~~~~-~l~~lFd~-Y~d~~~~~~ 79 (284)
.++..+.+.|.+++.-.|.++.......+ ...-++...+..+=.. ...+. -++.++.- |+|.. -+.
T Consensus 45 ~v~~~E~~~i~~~~~~~~l~~~~~~~l~~~~~~~~l~~~~~~i~~~----------~~~~~~~l~~l~~vA~ADG~-~~~ 113 (161)
T 2ou3_A 45 VISPEEKDWALGFCASWGVADWVIEDLKTYEADEALEEVIARSPQV----------SMAQRDILLSAIWVSAADGE-LHE 113 (161)
T ss_dssp CCCHHHHHHHHHHHHHTTCCHHHHHHHHHCCCCSCHHHHHTTCTTG----------GGCHHHHHHHHHHHHHTTSS-CCH
T ss_pred CCCHHHHHHHHHHHHHcCCCHHHHHHHhhccCCCCHHHHHHHHHHH----------hccHHHHHHHHHHHHHHcCC-CCH
Confidence 35667788888888888888876655555 3344443322211000 00111 33444432 34421 133
Q ss_pred cCHHHHHHHHHHcCCCCCchHHH
Q psy9055 80 ILVEGIMKFLDDLSLSPESKLVL 102 (284)
Q Consensus 80 I~~dG~~~~~edLgv~ped~~~L 102 (284)
-...=+.++++-|||++.++..+
T Consensus 114 ~E~~~L~~iA~~Lgls~~~~~~l 136 (161)
T 2ou3_A 114 KEKAKIRKMATILGIKEEIVDQL 136 (161)
T ss_dssp HHHHHHHHHHHHHTCCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHH
Confidence 45566888888899988876555
No 328
>2cr7_A Paired amphipathic helix protein SIN3B; paired amphipathic helix repeat, transcriptional repressor, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2rmr_A 2rms_A
Probab=23.05 E-value=1.2e+02 Score=21.86 Aligned_cols=56 Identities=11% Similarity=0.244 Sum_probs=43.9
Q ss_pred hHHHHh-hChhhHHHHHhhhhhcccCCCCCCCCHHHHHHHHHHhhcCCcccHHHHHHHHHh
Q psy9055 165 SLEAEL-KDNLKFKDFYQFTFNYAKNPGQKGLDLDMAITYWNIVLQGRFKFLHLWCTFLQE 224 (284)
Q Consensus 165 ~l~~~l-~d~~~Fk~~Y~f~F~~~k~~~qk~l~~etAi~~W~lll~~~~~~l~~W~~FL~~ 224 (284)
.+.... .+|+.+++|-.---.|-. ..+++...++-=..||.++.+++..+-.||-.
T Consensus 19 ~VK~rF~~~p~~Y~~FL~im~~fk~----~~~~~~~v~~rV~~Lf~~hpdLi~gFn~FLP~ 75 (80)
T 2cr7_A 19 QVKIRFGSDPATYNGFLEIMKEFKS----QSIDTPGVIRRVSQLFHEHPDLIVGFNAFLPS 75 (80)
T ss_dssp HHHHHTSSCHHHHHHHHHHHHHHHT----TSSCHHHHHHHHHHHGGGCHHHHHHHHHHSSC
T ss_pred HHHHHHccChHHHHHHHHHHHHHHh----cCCCHHHHHHHHHHHHcCCHHHHHHHHHHCcC
Confidence 444445 468888888886666653 46889999999999999999999999999853
No 329
>2qho_B E3 ubiquitin-protein ligase EDD1; protein-protein complex, protein binding/ligase complex; 1.85A {Homo sapiens}
Probab=23.00 E-value=1e+02 Score=20.78 Aligned_cols=39 Identities=13% Similarity=0.222 Sum_probs=31.0
Q ss_pred HHHHHHHHhh-hCCCHHHHHHHHHhCCCChHHHHHhhcCC
Q psy9055 9 KDKVKRFISF-TQTGELTAINCLSQNDWKLDLASDNYFQN 47 (284)
Q Consensus 9 ~~~i~qF~~i-T~~s~~~A~~~L~~~~w~l~~A~~~fy~~ 47 (284)
.+.|.|-..+ -|.|..+-++=|++.|-|++.|++.....
T Consensus 10 e~li~q~q~VLqgksR~vIirELqrTnLdVN~AvNNlLsR 49 (53)
T 2qho_B 10 EELISQAQVVLQGKSRSVIIRELQRTNLDVNLAVNNLLSR 49 (53)
T ss_dssp HHHHHHHHHHSTTCCHHHHHHHHHHTTTCHHHHHHHHHC-
T ss_pred HHHHHHHHHHhcCCcHHHHHHHHHHhCccHHHHHHHHhcc
Confidence 4556665554 47789999999999999999999987654
No 330
>3h0g_D DNA-directed RNA polymerase II subunit RPB4; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=21.92 E-value=2.1e+02 Score=22.81 Aligned_cols=32 Identities=25% Similarity=0.457 Sum_probs=26.7
Q ss_pred cccHHHHHHHHHHhCCCcHHHHHhhccchhHhh
Q psy9055 115 EFSRDEFMNGMLELGCDSIEKLKMRLPSLEAEL 147 (284)
Q Consensus 115 ~~tr~eF~~g~~~l~~~si~~lk~~l~~l~~~~ 147 (284)
.+++-|-.. +..+.+.|.+..|.-||+++..+
T Consensus 84 ~L~~fEia~-L~NL~P~t~dEak~LIpsL~~r~ 115 (135)
T 3h0g_D 84 RFHKFERAQ-LGTLCCEDAEEARTLIPSLANKI 115 (135)
T ss_dssp CSCHHHHHH-HHHHCCCCHHHHHHHCGGGTTTS
T ss_pred cCCHHHHHH-HccCCCCCHHHHHHHHHHhcccC
Confidence 477777755 88899999999999999888664
No 331
>2h5n_A Hypothetical protein PG_1108; SAD, MCSG,PSI, structural genomics, PR structure initiative; 2.01A {Porphyromonas gingivalis} SCOP: a.287.1.2
Probab=21.84 E-value=2.8e+02 Score=21.45 Aligned_cols=91 Identities=11% Similarity=-0.099 Sum_probs=55.0
Q ss_pred CCCcchHHHHHHHHhhhCCCHHHHHHHHHhCC-CChHHHHHhhcCCCccchhccCCcccHHHHHHHHHH-hcCCCCCCcc
Q psy9055 3 KLKSSQKDKVKRFISFTQTGELTAINCLSQND-WKLDLASDNYFQNPSAYYKEQKSSVDRKKLESLYSK-YKDASEPDKI 80 (284)
Q Consensus 3 ~l~~~~~~~i~qF~~iT~~s~~~A~~~L~~~~-w~l~~A~~~fy~~~~~~~~~~~~~~~~~~l~~lFd~-Y~d~~~~~~I 80 (284)
.+++.+.+.+++++.-.|.++..+.+.++... -....++..+-..+ ...-..-++.+|.= |+|. .-+.-
T Consensus 34 ~v~~~E~~~l~~~l~~lgl~~~e~~~l~~~~~~~~~~~~~~~~~~~~--------~e~r~~ll~~L~~IA~ADG-~i~~~ 104 (133)
T 2h5n_A 34 KIKPAEIAVMTREFMRFGILQDQVDLLLKASDSIEASQAVALIARMD--------EERKKYVASYLGVIMASDG-DIDDN 104 (133)
T ss_dssp CCCHHHHHHHHHHHGGGTCCHHHHHHHHHHHTTSCHHHHHHHHHTSC--------HHHHHHHHHHHHHHSCBTT-BCCHH
T ss_pred CCCHHHHHHHHHHHHHhCcCHHHHHHHHHHHHhccHHHHHHHHHcCC--------HHHHHHHHHHHHHHhhcCC-CCCHH
Confidence 45677888899998888999988888877764 35666665431111 00011233444432 2231 11333
Q ss_pred CHHHHHHHHHHcCCCCCchHHH
Q psy9055 81 LVEGIMKFLDDLSLSPESKLVL 102 (284)
Q Consensus 81 ~~dG~~~~~edLgv~ped~~~L 102 (284)
...=+.+.|+-||+++.+..--
T Consensus 105 E~~lLr~ia~~Lgls~~d~~~~ 126 (133)
T 2h5n_A 105 ELALWTLISTLCGLPTMTVMEA 126 (133)
T ss_dssp HHHHHHHHHHHHTCCCCCHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHH
Confidence 4556788889999999998433
No 332
>1ku1_A ARF guanine-nucleotide exchange factor 2; SEC7 domain, guanine nucleotide exchange factor (GEF), ARF small GTP-binding proteins; 1.93A {Saccharomyces cerevisiae} SCOP: a.118.3.1 PDB: 1re0_B*
Probab=21.83 E-value=1.8e+02 Score=25.31 Aligned_cols=38 Identities=11% Similarity=0.125 Sum_probs=26.7
Q ss_pred hHHHHHHHHhhhCCCHHHHHHHHHhCCC---ChHHHHHhhc
Q psy9055 8 QKDKVKRFISFTQTGELTAINCLSQNDW---KLDLASDNYF 45 (284)
Q Consensus 8 ~~~~i~qF~~iT~~s~~~A~~~L~~~~w---~l~~A~~~fy 45 (284)
++..+.+.+..-+.+++.+++||..+++ +-...|..|+
T Consensus 23 ~K~~~~~~~~~FN~~PkkGI~~L~~~g~l~~~~~~~iA~fL 63 (230)
T 1ku1_A 23 RKTEFIECTNAFNEKPKKGIPMLIEKGFIASDSDKDIAEFL 63 (230)
T ss_dssp HHHHHHHHHHHHHHCHHHHHHHHHHTTSSSCSSHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHCCCcCCCCHHHHHHHH
Confidence 4555677777778888888888888876 2345666664
No 333
>1nri_A Hypothetical protein HI0754; structural genomics, haemophilus influ PSI, protein structure initiative, midwest center for struc genomics; 1.90A {Haemophilus influenzae} SCOP: c.80.1.3
Probab=21.52 E-value=34 Score=30.70 Aligned_cols=34 Identities=21% Similarity=0.121 Sum_probs=9.9
Q ss_pred HHHHHhhhCCCHHHHHHHHHhCCCChHHHHHhhc
Q psy9055 12 VKRFISFTQTGELTAINCLSQNDWKLDLASDNYF 45 (284)
Q Consensus 12 i~qF~~iT~~s~~~A~~~L~~~~w~l~~A~~~fy 45 (284)
.+-.+.+||++.++|...|+++++++-.||-...
T Consensus 248 ~~~i~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~ 281 (306)
T 1nri_A 248 VRIVMQATDCNKTLAEQTLLEADQNAKLAIMMIL 281 (306)
T ss_dssp HHHHHHHSCCCC----------------------
T ss_pred HHHHHHHhCCCHHHHHHHHHHhCCChHHHHHHHH
Confidence 5567789999999999999999999999998764
No 334
>1e91_A Paired amphipathic helix protein SIN3B; eukaryotic transcriptional regulation, SIN3, PAH domains, protein-protein interactions; NMR {Mus musculus} SCOP: a.59.1.1 PDB: 1pd7_A
Probab=21.34 E-value=1.5e+02 Score=21.58 Aligned_cols=59 Identities=15% Similarity=0.327 Sum_probs=43.2
Q ss_pred hHHHHh-hChhhHHHHHhhhhhcccCC------CCCCCCHHHHHHHHHHhhcCCcccHHHHHHHHH
Q psy9055 165 SLEAEL-KDNLKFKDFYQFTFNYAKNP------GQKGLDLDMAITYWNIVLQGRFKFLHLWCTFLQ 223 (284)
Q Consensus 165 ~l~~~l-~d~~~Fk~~Y~f~F~~~k~~------~qk~l~~etAi~~W~lll~~~~~~l~~W~~FL~ 223 (284)
.+.... .+|+.+++|-.---.|-++. ..+++.+...++-=..||.++.+++..+-.||-
T Consensus 16 kVK~rF~~~p~~Y~~FL~il~~yk~~~~d~~~~~~~~~s~~eV~~~V~~Lf~~hpDLl~~F~~FLP 81 (85)
T 1e91_A 16 KIKTRFLDHPEIYRSFLEILHTYQKEQLHTKGRPFRGMSEEEVFTEVANLFRGQEDLLSEFGQFLP 81 (85)
T ss_dssp HHHHHTSSCHHHHHHHHHHHHHHHHTTCSSSCCCSSCCCHHHHHHHHHHHTSSCHHHHHHHHHHSC
T ss_pred HHHHHHhcChHHHHHHHHHHHHHHHccccccccccccCcHHHHHHHHHHHHccCHHHHHHHHHHCc
Confidence 444445 36888888877555554432 124578899999999999999999999999984
No 335
>2lbc_A Ubiquitin carboxyl-terminal hydrolase 13; tandem UBA of USP13; NMR {Homo sapiens}
Probab=20.97 E-value=78 Score=24.60 Aligned_cols=37 Identities=5% Similarity=-0.094 Sum_probs=31.2
Q ss_pred HHHHHHHhhhCCCHHHHHHHHHhCCC-ChHHHHHhhcCC
Q psy9055 10 DKVKRFISFTQTGELTAINCLSQNDW-KLDLASDNYFQN 47 (284)
Q Consensus 10 ~~i~qF~~iT~~s~~~A~~~L~~~~w-~l~~A~~~fy~~ 47 (284)
+.|.+.++ .|-++..|+.-|..++. +++.|++=.+.+
T Consensus 5 ~~l~~L~~-MGF~~~~a~~AL~~t~n~~~e~A~~wL~~~ 42 (126)
T 2lbc_A 5 SSVMQLAE-MGFPLEACRKAVYFTGNMGAEVAFNWIIVH 42 (126)
T ss_dssp HHHHHHHT-TSSCCHHHHHHHHHHTSCCHHHHHHHHHHG
T ss_pred HHHHHHHH-cCCCHHHHHHHHHHcCCCCHHHHHHHHHHh
Confidence 56788888 79999999999999976 899999877654
No 336
>3g2s_A C-terminal fragment of sortilin-related receptor; ADP-ribosylation factor binding protein GGA1, VHS, acidic- cluster dileucine signal, sorla; 1.70A {Homo sapiens} SCOP: a.118.9.2 PDB: 3g2t_A* 3g2u_A 3g2v_A* 3g2w_A 1ujk_A* 1jwf_A 1ujj_A 1jwg_A* 1py1_A*
Probab=20.17 E-value=2.1e+02 Score=22.95 Aligned_cols=36 Identities=17% Similarity=0.178 Sum_probs=21.3
Q ss_pred HHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCCCCch
Q psy9055 63 KLESLYSKYKDASEPDKILVEGIMKFLDDLSLSPESK 99 (284)
Q Consensus 63 ~l~~lFd~Y~d~~~~~~I~~dG~~~~~edLgv~ped~ 99 (284)
.++.+-++=-++.- ..-+.++++.+|+-+.-+++.+
T Consensus 11 ~~~~~IekATs~~l-~~~dw~~ileicD~I~~~~~~p 46 (149)
T 3g2s_A 11 TLEARINRATNPLN-KELDWASINGFCEQLNEDFEGP 46 (149)
T ss_dssp CHHHHHHHHSCTTC-SSCCHHHHHHHHHHGGGSSSHH
T ss_pred cHHHHHHHHcCCCC-CCcCHHHHHHHHHHHHCCCCcH
Confidence 34445555444432 2356777788887777776554
Done!