BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9058
(142 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8BMS1|ECHA_MOUSE Trifunctional enzyme subunit alpha, mitochondrial OS=Mus musculus
GN=Hadha PE=1 SV=1
Length = 763
Score = 169 bits (427), Expect = 6e-42, Method: Composition-based stats.
Identities = 78/134 (58%), Positives = 100/134 (74%), Gaps = 1/134 (0%)
Query: 8 GRKSGKGYFVYAKGSKARPVNDGALAILKKYSLQPQSALK-DEDLQLRMVSRFVNEAVLC 66
GRKSGKG+++Y +GSK + +N IL L + + DED+Q R+++RFVNEAVLC
Sbjct: 629 GRKSGKGFYIYQEGSKNKSLNSEMDNILANLRLPAKPEVSSDEDVQYRVITRFVNEAVLC 688
Query: 67 LEETILNSPTDGDVGAVFGLGFPPFSGGPFRWVDWYGADKLVQKMLSYENLYGAPFRPCQ 126
L+E IL +P +GD+GAVFGLGFPP GGPFR+VD YGA K+V ++ YE+ YG F PCQ
Sbjct: 689 LQEGILATPAEGDIGAVFGLGFPPCLGGPFRFVDLYGAQKVVDRLRKYESAYGTQFTPCQ 748
Query: 127 LLLDHAKDSSKKFY 140
LLLDHA +SSKKFY
Sbjct: 749 LLLDHANNSSKKFY 762
>sp|P40939|ECHA_HUMAN Trifunctional enzyme subunit alpha, mitochondrial OS=Homo sapiens
GN=HADHA PE=1 SV=2
Length = 763
Score = 167 bits (424), Expect = 2e-41, Method: Composition-based stats.
Identities = 76/134 (56%), Positives = 98/134 (73%), Gaps = 1/134 (0%)
Query: 8 GRKSGKGYFVYAKGSKARPVNDGALAILKKYSLQPQSALK-DEDLQLRMVSRFVNEAVLC 66
GRKSGKG+++Y +G K + +N +IL L P+S + DED+Q R+V+RFVNEAV+C
Sbjct: 629 GRKSGKGFYIYQEGVKRKDLNSDMDSILASLKLPPKSEVSSDEDIQFRLVTRFVNEAVMC 688
Query: 67 LEETILNSPTDGDVGAVFGLGFPPFSGGPFRWVDWYGADKLVQKMLSYENLYGAPFRPCQ 126
L+E IL +P +GD+GAVFGLGFPP GGPFR+VD YGA K+V ++ YE YG F PCQ
Sbjct: 689 LQEGILATPAEGDIGAVFGLGFPPCLGGPFRFVDLYGAQKIVDRLKKYEAAYGKQFTPCQ 748
Query: 127 LLLDHAKDSSKKFY 140
LL DHA +KKFY
Sbjct: 749 LLADHANSPNKKFY 762
>sp|Q29554|ECHA_PIG Trifunctional enzyme subunit alpha, mitochondrial OS=Sus scrofa
GN=HADHA PE=1 SV=1
Length = 763
Score = 165 bits (417), Expect = 8e-41, Method: Composition-based stats.
Identities = 76/134 (56%), Positives = 98/134 (73%), Gaps = 1/134 (0%)
Query: 8 GRKSGKGYFVYAKGSKARPVNDGALAILKKYSLQPQSALK-DEDLQLRMVSRFVNEAVLC 66
GRKSGKG++VY +G K R VN +IL + + + DED+Q R+V+RFVNEAVLC
Sbjct: 629 GRKSGKGFYVYQEGVKNRNVNSDTESILASLKIPSRPDISSDEDIQYRLVTRFVNEAVLC 688
Query: 67 LEETILNSPTDGDVGAVFGLGFPPFSGGPFRWVDWYGADKLVQKMLSYENLYGAPFRPCQ 126
L+E IL +P +GD+GAVFGLGFPP GGPFR+VD YGA K+V ++ YE +YG F PCQ
Sbjct: 689 LQEGILATPAEGDIGAVFGLGFPPCLGGPFRFVDLYGAQKVVDRLRKYEAIYGKQFTPCQ 748
Query: 127 LLLDHAKDSSKKFY 140
LL+DHA +KKF+
Sbjct: 749 LLIDHASSPNKKFF 762
>sp|Q64428|ECHA_RAT Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus
norvegicus GN=Hadha PE=1 SV=2
Length = 763
Score = 160 bits (406), Expect = 2e-39, Method: Composition-based stats.
Identities = 76/134 (56%), Positives = 97/134 (72%), Gaps = 1/134 (0%)
Query: 8 GRKSGKGYFVYAKGSKARPVNDGALAILKKYSLQPQSALK-DEDLQLRMVSRFVNEAVLC 66
GRKSGKG+++Y GSK + +N IL L + + DED+Q R+++RFVNEAVLC
Sbjct: 629 GRKSGKGFYIYQSGSKNKNLNSEIDNILVNLRLPAKPEVSSDEDIQYRVITRFVNEAVLC 688
Query: 67 LEETILNSPTDGDVGAVFGLGFPPFSGGPFRWVDWYGADKLVQKMLSYENLYGAPFRPCQ 126
L+E IL +P +GD+GAVFGLGFPP GGPFR+VD YGA K+V ++ YE+ YG F PCQ
Sbjct: 689 LQEGILATPEEGDIGAVFGLGFPPCLGGPFRFVDLYGAQKVVDRLRKYESAYGTQFTPCQ 748
Query: 127 LLLDHAKDSSKKFY 140
LL D A +SSKKFY
Sbjct: 749 LLRDLANNSSKKFY 762
>sp|Q9KT58|FADJ_VIBCH Fatty acid oxidation complex subunit alpha OS=Vibrio cholerae
serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
GN=fadJ PE=3 SV=2
Length = 708
Score = 125 bits (313), Expect = 1e-28, Method: Composition-based stats.
Identities = 64/134 (47%), Positives = 87/134 (64%), Gaps = 5/134 (3%)
Query: 8 GRKSGKGYFVYAKGSKARPVNDGALAILKKYSLQPQSALKDEDLQLRMVSRFVNEAVLCL 67
GRKSGKG++ Y KGSK + V+ +LK L P+S L D+++ +R + +NEAV CL
Sbjct: 580 GRKSGKGFYTY-KGSKKKEVDKSVYKLLK---LTPESKLNDKEIAMRCLLPMLNEAVRCL 635
Query: 68 EETILNSPTDGDVGAVFGLGFPPFSGGPFRWVDWYGADKLVQKMLSYENLYGAPFRPCQL 127
+E I+ S DGD+GA+FG+GFPPF GGPFR++D G K+V+ M + YG F PC
Sbjct: 636 DEGIIRSARDGDMGAIFGIGFPPFLGGPFRYMDTLGLTKVVEMMNQHTEKYGERFAPCDG 695
Query: 128 LLDHAKDSSKKFYP 141
LL A +KFYP
Sbjct: 696 LLTRA-GLGEKFYP 708
>sp|A5F2P2|FADJ_VIBC3 Fatty acid oxidation complex subunit alpha OS=Vibrio cholerae
serotype O1 (strain ATCC 39541 / Ogawa 395 / O395)
GN=fadJ PE=3 SV=1
Length = 708
Score = 125 bits (313), Expect = 1e-28, Method: Composition-based stats.
Identities = 64/134 (47%), Positives = 87/134 (64%), Gaps = 5/134 (3%)
Query: 8 GRKSGKGYFVYAKGSKARPVNDGALAILKKYSLQPQSALKDEDLQLRMVSRFVNEAVLCL 67
GRKSGKG++ Y KGSK + V+ +LK L P+S L D+++ +R + +NEAV CL
Sbjct: 580 GRKSGKGFYTY-KGSKKKEVDKSVYKLLK---LTPESKLNDKEIAMRCLLPMLNEAVRCL 635
Query: 68 EETILNSPTDGDVGAVFGLGFPPFSGGPFRWVDWYGADKLVQKMLSYENLYGAPFRPCQL 127
+E I+ S DGD+GA+FG+GFPPF GGPFR++D G K+V+ M + YG F PC
Sbjct: 636 DEGIIRSARDGDMGAIFGIGFPPFLGGPFRYMDTLGLTKVVEMMNQHTEKYGERFAPCDG 695
Query: 128 LLDHAKDSSKKFYP 141
LL A +KFYP
Sbjct: 696 LLTRA-GLGEKFYP 708
>sp|Q87MM3|FADJ_VIBPA Fatty acid oxidation complex subunit alpha OS=Vibrio
parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
GN=fadJ PE=3 SV=1
Length = 703
Score = 125 bits (313), Expect = 1e-28, Method: Composition-based stats.
Identities = 64/133 (48%), Positives = 88/133 (66%), Gaps = 6/133 (4%)
Query: 8 GRKSGKGYFVYAKGSKARPVNDGALAILKKYSLQPQSALKDEDLQLRMVSRFVNEAVLCL 67
GRKSGKG++ Y KG K + V+ +LK L P+S L D D+ LR V +NEAV CL
Sbjct: 577 GRKSGKGFYTY-KGKK-KEVDKSIYKLLK---LTPESKLSDNDIALRCVLPMLNEAVRCL 631
Query: 68 EETILNSPTDGDVGAVFGLGFPPFSGGPFRWVDWYGADKLVQKMLSYENLYGAPFRPCQL 127
++ I+ SP DGD+GA+FG+GFPPF GGPFR++D +G +LV+KM + + YG + PC
Sbjct: 632 DDGIIRSPRDGDIGAIFGIGFPPFLGGPFRYMDQFGLKELVEKMNEFASKYGDRYAPCDG 691
Query: 128 LLDHAKDSSKKFY 140
LL A + + FY
Sbjct: 692 LLTRAGE-GRTFY 703
>sp|Q8DB47|FADJ_VIBVU Fatty acid oxidation complex subunit alpha OS=Vibrio vulnificus
(strain CMCP6) GN=fadJ PE=3 SV=1
Length = 705
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/133 (48%), Positives = 88/133 (66%), Gaps = 6/133 (4%)
Query: 8 GRKSGKGYFVYAKGSKARPVNDGALAILKKYSLQPQSALKDEDLQLRMVSRFVNEAVLCL 67
GRKSGKG++ Y KG K + V+ +LK L P+S L D D+ LR V +NEAV CL
Sbjct: 577 GRKSGKGFYTY-KGKK-KEVDKSVYKLLK---LTPESKLSDNDIALRCVLPMLNEAVRCL 631
Query: 68 EETILNSPTDGDVGAVFGLGFPPFSGGPFRWVDWYGADKLVQKMLSYENLYGAPFRPCQL 127
++ I+ SP DGD+GA+FG+GFPPF GGPFR++D +G +LV+KM + YG F PC
Sbjct: 632 DDGIIRSPRDGDIGAIFGIGFPPFLGGPFRYMDQFGLKELVEKMNQFAEKYGDRFAPCDG 691
Query: 128 LLDHAKDSSKKFY 140
LL A + ++FY
Sbjct: 692 LLTRAGE-GRRFY 703
>sp|Q7MIS5|FADJ_VIBVY Fatty acid oxidation complex subunit alpha OS=Vibrio vulnificus
(strain YJ016) GN=fadJ PE=3 SV=1
Length = 705
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/133 (48%), Positives = 88/133 (66%), Gaps = 6/133 (4%)
Query: 8 GRKSGKGYFVYAKGSKARPVNDGALAILKKYSLQPQSALKDEDLQLRMVSRFVNEAVLCL 67
GRKSGKG++ Y KG K + V+ +LK L P+S L D D+ LR V +NEAV CL
Sbjct: 577 GRKSGKGFYTY-KGKK-KEVDKSVYKLLK---LTPESKLSDNDIALRCVLPMLNEAVRCL 631
Query: 68 EETILNSPTDGDVGAVFGLGFPPFSGGPFRWVDWYGADKLVQKMLSYENLYGAPFRPCQL 127
++ I+ SP DGD+GA+FG+GFPPF GGPFR++D +G +LV+KM + YG F PC
Sbjct: 632 DDGIIRSPRDGDIGAIFGIGFPPFLGGPFRYMDQFGLKELVEKMNQFAEKYGDRFAPCDG 691
Query: 128 LLDHAKDSSKKFY 140
LL A + ++FY
Sbjct: 692 LLTRAGE-GRRFY 703
>sp|A3QFP3|FADJ_SHELP Fatty acid oxidation complex subunit alpha OS=Shewanella loihica
(strain ATCC BAA-1088 / PV-4) GN=fadJ PE=3 SV=1
Length = 706
Score = 120 bits (302), Expect = 2e-27, Method: Composition-based stats.
Identities = 60/133 (45%), Positives = 85/133 (63%), Gaps = 4/133 (3%)
Query: 8 GRKSGKGYFVYAKGSKARPVNDGALAILKKYSLQPQSALKDEDLQLRMVSRFVNEAVLCL 67
GRK+GKG++ Y SK + V++ +L L P + + L R V + +NEAV CL
Sbjct: 577 GRKNGKGFYQYGAKSKKKLVDESVYGVL---GLTPGADGEPIALAERCVVQMLNEAVRCL 633
Query: 68 EETILNSPTDGDVGAVFGLGFPPFSGGPFRWVDWYGADKLVQKMLSYENLYGAPFRPCQL 127
EE I+ SP DGD+GA+FG+GFPPF GGPFR++D GA LV+ + Y++ +G F PC
Sbjct: 634 EEGIIASPRDGDIGAIFGIGFPPFLGGPFRYMDSLGAKHLVETLKRYQDQFGDRFAPCDR 693
Query: 128 LLDHAKDSSKKFY 140
L++ A +S KFY
Sbjct: 694 LVEMA-ESGSKFY 705
>sp|A7MS61|FADJ_VIBHB Fatty acid oxidation complex subunit alpha OS=Vibrio harveyi
(strain ATCC BAA-1116 / BB120) GN=fadJ PE=3 SV=1
Length = 704
Score = 119 bits (299), Expect = 4e-27, Method: Composition-based stats.
Identities = 61/133 (45%), Positives = 88/133 (66%), Gaps = 6/133 (4%)
Query: 8 GRKSGKGYFVYAKGSKARPVNDGALAILKKYSLQPQSALKDEDLQLRMVSRFVNEAVLCL 67
GRK+GKG++ Y KG K + V+ ++ K +L P+S L D D+ LR V +NEAV CL
Sbjct: 577 GRKTGKGFYTY-KGKK-KEVDK---SVYKLLNLTPESKLSDNDIALRCVLPMLNEAVRCL 631
Query: 68 EETILNSPTDGDVGAVFGLGFPPFSGGPFRWVDWYGADKLVQKMLSYENLYGAPFRPCQL 127
++ I+ SP DGD+GA+FG+GFPPF GGPF ++D +G +LV+KM + + YG + PC
Sbjct: 632 DDGIIRSPRDGDIGAIFGIGFPPFLGGPFCYMDQFGLKELVEKMNEFASKYGDRYAPCDG 691
Query: 128 LLDHAKDSSKKFY 140
LL A + + FY
Sbjct: 692 LLTRAGE-GRNFY 703
>sp|Q8ECP7|FADJ_SHEON Fatty acid oxidation complex subunit alpha OS=Shewanella oneidensis
(strain MR-1) GN=fadJ PE=3 SV=1
Length = 707
Score = 116 bits (291), Expect = 3e-26, Method: Composition-based stats.
Identities = 55/132 (41%), Positives = 81/132 (61%), Gaps = 3/132 (2%)
Query: 8 GRKSGKGYFVYAKGSKARPVNDGALAILKKYSLQPQSALKDEDLQLRMVSRFVNEAVLCL 67
GRK+GKG++ Y SK + V++ +L ++P + + R V + +NEAV CL
Sbjct: 579 GRKNGKGFYQYGAASKKKAVDETVYGVL---GIKPGVDKEMSAVAERCVVQMLNEAVRCL 635
Query: 68 EETILNSPTDGDVGAVFGLGFPPFSGGPFRWVDWYGADKLVQKMLSYENLYGAPFRPCQL 127
+ I+ SP DGD+GA+FG+GFPPF GGPF ++D GAD LV+ + Y+ YG F PCQ
Sbjct: 636 DAGIIASPRDGDIGAIFGIGFPPFLGGPFHYIDTLGADNLVKILERYQTQYGDRFEPCQR 695
Query: 128 LLDHAKDSSKKF 139
L A + ++ F
Sbjct: 696 LKAMAAEKARFF 707
>sp|B0TL21|FADJ_SHEHH Fatty acid oxidation complex subunit alpha OS=Shewanella
halifaxensis (strain HAW-EB4) GN=fadJ PE=3 SV=1
Length = 708
Score = 116 bits (291), Expect = 4e-26, Method: Composition-based stats.
Identities = 54/132 (40%), Positives = 85/132 (64%), Gaps = 3/132 (2%)
Query: 8 GRKSGKGYFVYAKGSKARPVNDGALAILKKYSLQPQSALKDEDLQLRMVSRFVNEAVLCL 67
GRK+GKG+++Y KA+ V+ ++L L+P + ++ R V + +NEAV CL
Sbjct: 579 GRKNGKGFYLYGGKKKAKEVDQTVYSVL---GLKPGVDTEATEVAQRCVVQMLNEAVRCL 635
Query: 68 EETILNSPTDGDVGAVFGLGFPPFSGGPFRWVDWYGADKLVQKMLSYENLYGAPFRPCQL 127
EE+I+ P DGD+GA+FG+GFPPF GGPF ++D GA LV+ + +Y++ YG+ F P
Sbjct: 636 EESIIACPRDGDIGAIFGIGFPPFLGGPFHYIDTLGAANLVKILENYQSRYGSRFEPAAK 695
Query: 128 LLDHAKDSSKKF 139
L A++ ++ F
Sbjct: 696 LKQMAEEGTRFF 707
>sp|A1JK30|FADJ_YERE8 Fatty acid oxidation complex subunit alpha OS=Yersinia
enterocolitica serotype O:8 / biotype 1B (strain 8081)
GN=fadJ PE=3 SV=2
Length = 745
Score = 116 bits (290), Expect = 5e-26, Method: Composition-based stats.
Identities = 59/139 (42%), Positives = 85/139 (61%), Gaps = 6/139 (4%)
Query: 8 GRKSGKGYFVY-AKGS----KARPVNDGALAILKKYSLQPQSALKDEDLQLRMVSRFVNE 62
GRK+G+G+++Y AK S K PV ++ + P++ L+ + R +NE
Sbjct: 594 GRKNGRGFYLYPAKSSGFKWKRSPVKQVDTSVYTLLGVTPKAHLESAVIAQRCTMMMLNE 653
Query: 63 AVLCLEETILNSPTDGDVGAVFGLGFPPFSGGPFRWVDWYGADKLVQKMLSYENLYGAPF 122
A CL+E+I+ +P DGD+GAVFG+GFPPF GGPFR++D GADK+V+ + YG F
Sbjct: 654 AARCLDESIIRNPRDGDIGAVFGIGFPPFLGGPFRYMDSLGADKVVKTLNLLAQQYGERF 713
Query: 123 RPCQLLLDHAKDSSKKFYP 141
PC LL+ A K+FYP
Sbjct: 714 EPCSLLVTMA-GQQKRFYP 731
>sp|Q07ZP8|FADJ_SHEFN Fatty acid oxidation complex subunit alpha OS=Shewanella
frigidimarina (strain NCIMB 400) GN=fadJ PE=3 SV=1
Length = 710
Score = 115 bits (288), Expect = 8e-26, Method: Composition-based stats.
Identities = 59/134 (44%), Positives = 82/134 (61%), Gaps = 5/134 (3%)
Query: 8 GRKSGKGYFVYA-KGSKARPVNDGALAILKKYSLQPQSALKDEDLQLRMVSRFVNEAVLC 66
GRK+GKG++ Y K KA+ V++ +L + A + + R + +NEAV C
Sbjct: 579 GRKNGKGFYQYGPKAKKAKLVDESVYKVLDILIASDKEA---KGVAERCTIQMLNEAVRC 635
Query: 67 LEETILNSPTDGDVGAVFGLGFPPFSGGPFRWVDWYGADKLVQKMLSYENLYGAPFRPCQ 126
LEE I+ S DGD+GA+FG+GFPPF GGPFR++D GA LV + Y++LYG F PC
Sbjct: 636 LEEGIIASARDGDIGAIFGIGFPPFLGGPFRYIDTLGASNLVATLQGYQSLYGDRFAPCD 695
Query: 127 LLLDHAKDSSKKFY 140
L+ A D S +FY
Sbjct: 696 TLVKMASDGS-QFY 708
>sp|A6WQ25|FADJ_SHEB8 Fatty acid oxidation complex subunit alpha OS=Shewanella baltica
(strain OS185) GN=fadJ PE=3 SV=1
Length = 706
Score = 115 bits (287), Expect = 1e-25, Method: Composition-based stats.
Identities = 55/133 (41%), Positives = 86/133 (64%), Gaps = 4/133 (3%)
Query: 8 GRKSGKGYFVY-AKGSKARPVNDGALAILKKYSLQPQSALKDEDLQLRMVSRFVNEAVLC 66
GRK+GKG++ Y A KA+ V++ +L ++P + + + R V + +NEAV C
Sbjct: 577 GRKNGKGFYQYGASSKKAKAVDESVYGVL---GIKPGTNKDAKAVAERCVVQMLNEAVRC 633
Query: 67 LEETILNSPTDGDVGAVFGLGFPPFSGGPFRWVDWYGADKLVQKMLSYENLYGAPFRPCQ 126
LE+ I+ SP DGD+GA+FG+GFPPF GGPF ++D GA LV+ + SY++ +G F PC+
Sbjct: 634 LEDGIIASPRDGDIGAIFGIGFPPFLGGPFHYIDTLGAANLVKILESYQSQFGNRFEPCE 693
Query: 127 LLLDHAKDSSKKF 139
L A++++ F
Sbjct: 694 RLKTMAQENAHFF 706
>sp|A0KV76|FADJ_SHESA Fatty acid oxidation complex subunit alpha OS=Shewanella sp.
(strain ANA-3) GN=fadJ PE=3 SV=1
Length = 709
Score = 114 bits (286), Expect = 2e-25, Method: Composition-based stats.
Identities = 60/139 (43%), Positives = 86/139 (61%), Gaps = 13/139 (9%)
Query: 8 GRKSGKGYFVYAKGSKA----RPVNDGALAILKKYSLQPQSALKDEDLQL---RMVSRFV 60
GRK+GKG++ YA G+KA + V++ A+L ++P D+DL R V + +
Sbjct: 577 GRKNGKGFYQYAAGNKASSKKKAVDESVYAVL---GIKPG---MDKDLSAVAERCVVQML 630
Query: 61 NEAVLCLEETILNSPTDGDVGAVFGLGFPPFSGGPFRWVDWYGADKLVQKMLSYENLYGA 120
NEAV CL++ I+ SP DGD+GA+FG+GFPPF GGPF ++D GAD LV + Y+ YG
Sbjct: 631 NEAVRCLDDGIIASPRDGDIGAIFGIGFPPFLGGPFHYIDTLGADNLVNILERYQAQYGD 690
Query: 121 PFRPCQLLLDHAKDSSKKF 139
F PC L A + ++ F
Sbjct: 691 RFEPCPRLKAMAAEKARFF 709
>sp|Q0HKD1|FADJ_SHESM Fatty acid oxidation complex subunit alpha OS=Shewanella sp.
(strain MR-4) GN=fadJ PE=3 SV=1
Length = 709
Score = 114 bits (285), Expect = 2e-25, Method: Composition-based stats.
Identities = 56/136 (41%), Positives = 85/136 (62%), Gaps = 7/136 (5%)
Query: 8 GRKSGKGYFVYAKGSKA----RPVNDGALAILKKYSLQPQSALKDEDLQLRMVSRFVNEA 63
GRK+GKG++ YA G+KA + V++ +L ++P + + R V + +NEA
Sbjct: 577 GRKNGKGFYQYAAGNKAPSKKKAVDESVYGVL---GIKPGIDKEMSAVAERCVVQMLNEA 633
Query: 64 VLCLEETILNSPTDGDVGAVFGLGFPPFSGGPFRWVDWYGADKLVQKMLSYENLYGAPFR 123
V CL++ I+ SP DGD+GA+FG+GFPPF GGPF ++D GAD LV+ + Y+ YG F
Sbjct: 634 VRCLDDGIIASPRDGDIGAIFGIGFPPFLGGPFHYIDTLGADNLVKILERYQAQYGDRFE 693
Query: 124 PCQLLLDHAKDSSKKF 139
PC L + A + ++ F
Sbjct: 694 PCPRLKEMAAEKTRFF 709
>sp|Q0HWN3|FADJ_SHESR Fatty acid oxidation complex subunit alpha OS=Shewanella sp.
(strain MR-7) GN=fadJ PE=3 SV=1
Length = 709
Score = 114 bits (284), Expect = 2e-25, Method: Composition-based stats.
Identities = 56/136 (41%), Positives = 85/136 (62%), Gaps = 7/136 (5%)
Query: 8 GRKSGKGYFVYAKGSKA----RPVNDGALAILKKYSLQPQSALKDEDLQLRMVSRFVNEA 63
GRK+GKG++ YA G+KA + V++ +L ++P + + R V + +NEA
Sbjct: 577 GRKNGKGFYQYAAGNKASSKKKVVDESVYGVL---GIKPGIDKEMSAVAERCVVQMLNEA 633
Query: 64 VLCLEETILNSPTDGDVGAVFGLGFPPFSGGPFRWVDWYGADKLVQKMLSYENLYGAPFR 123
V CL++ I+ SP DGD+GA+FG+GFPPF GGPF ++D GAD LV+ + Y+ YG F
Sbjct: 634 VRCLDDGIIASPRDGDIGAIFGIGFPPFLGGPFHYIDTLGADNLVKILERYQAQYGDRFE 693
Query: 124 PCQLLLDHAKDSSKKF 139
PC L + A + ++ F
Sbjct: 694 PCPRLKEMAAEKTRFF 709
>sp|Q6LTK3|FADJ_PHOPR Fatty acid oxidation complex subunit alpha OS=Photobacterium
profundum GN=fadJ PE=3 SV=1
Length = 715
Score = 112 bits (281), Expect = 5e-25, Method: Composition-based stats.
Identities = 54/133 (40%), Positives = 84/133 (63%), Gaps = 6/133 (4%)
Query: 8 GRKSGKGYFVYAKGSKARPVNDGALAILKKYSLQPQSALKDEDLQLRMVSRFVNEAVLCL 67
GRKSGKG+++Y +K + V+ ++ K SL+P+ +D+ LR +NEA CL
Sbjct: 588 GRKSGKGFYLY--NTKKKEVDK---SVYKLLSLEPEQKAAGQDIALRCTLMMLNEAARCL 642
Query: 68 EETILNSPTDGDVGAVFGLGFPPFSGGPFRWVDWYGADKLVQKMLSYENLYGAPFRPCQL 127
+E ++ S DGD+GA+FG+GFPPF GGPFR++D GA ++V+ + + + YG F PC
Sbjct: 643 DEGVIKSARDGDIGAIFGIGFPPFLGGPFRYMDTLGAKRVVEMLKDHTDKYGGRFTPCDK 702
Query: 128 LLDHAKDSSKKFY 140
L+ A + + FY
Sbjct: 703 LVAMANE-EQSFY 714
>sp|A4Y897|FADJ_SHEPC Fatty acid oxidation complex subunit alpha OS=Shewanella
putrefaciens (strain CN-32 / ATCC BAA-453) GN=fadJ PE=3
SV=1
Length = 706
Score = 112 bits (280), Expect = 6e-25, Method: Composition-based stats.
Identities = 54/133 (40%), Positives = 83/133 (62%), Gaps = 4/133 (3%)
Query: 8 GRKSGKGYFVY-AKGSKARPVNDGALAILKKYSLQPQSALKDEDLQLRMVSRFVNEAVLC 66
GRK+GKG++ Y A K + V++ +L ++P + + L R V + +NEAV C
Sbjct: 577 GRKNGKGFYQYGASSKKTKAVDETVYGVL---GIKPSTNKDAKALAERCVVQMLNEAVRC 633
Query: 67 LEETILNSPTDGDVGAVFGLGFPPFSGGPFRWVDWYGADKLVQKMLSYENLYGAPFRPCQ 126
L+E I+ SP DGD+GA+FG+GFPPF GGPF ++D GA LV+ + Y++ +G F PC+
Sbjct: 634 LDEGIIASPRDGDIGAIFGIGFPPFLGGPFHYIDTLGAANLVKILEGYQSQFGNRFEPCE 693
Query: 127 LLLDHAKDSSKKF 139
L A+++ F
Sbjct: 694 RLKTMARENVSFF 706
>sp|A3D684|FADJ_SHEB5 Fatty acid oxidation complex subunit alpha OS=Shewanella baltica
(strain OS155 / ATCC BAA-1091) GN=fadJ PE=3 SV=1
Length = 706
Score = 112 bits (280), Expect = 6e-25, Method: Composition-based stats.
Identities = 54/133 (40%), Positives = 85/133 (63%), Gaps = 4/133 (3%)
Query: 8 GRKSGKGYFVY-AKGSKARPVNDGALAILKKYSLQPQSALKDEDLQLRMVSRFVNEAVLC 66
GRK+GKG++ Y A KA+ V++ +L ++P + + L R V + +NEAV C
Sbjct: 577 GRKNGKGFYQYGASSKKAKAVDESVYGVL---GIKPGTNKDAKALAERCVVQMLNEAVRC 633
Query: 67 LEETILNSPTDGDVGAVFGLGFPPFSGGPFRWVDWYGADKLVQKMLSYENLYGAPFRPCQ 126
L++ I+ SP DGD+GA+FG+GFPPF GGPF ++D GA LV+ + Y++ G+ F PC+
Sbjct: 634 LDDGIIASPRDGDIGAIFGIGFPPFLGGPFHYIDTLGAANLVRILEGYQSQLGSRFEPCE 693
Query: 127 LLLDHAKDSSKKF 139
L A++++ F
Sbjct: 694 RLKTMAQENAHFF 706
>sp|A1RI92|FADJ_SHESW Fatty acid oxidation complex subunit alpha OS=Shewanella sp.
(strain W3-18-1) GN=fadJ PE=3 SV=1
Length = 706
Score = 112 bits (279), Expect = 8e-25, Method: Composition-based stats.
Identities = 54/133 (40%), Positives = 84/133 (63%), Gaps = 4/133 (3%)
Query: 8 GRKSGKGYFVY-AKGSKARPVNDGALAILKKYSLQPQSALKDEDLQLRMVSRFVNEAVLC 66
GRK+GKG++ Y A K + V++ +L ++P + + L R V + +NEAV C
Sbjct: 577 GRKNGKGFYQYGASSKKTKAVDETVYGVL---GIKPGTNKDAKALAERCVVQMLNEAVRC 633
Query: 67 LEETILNSPTDGDVGAVFGLGFPPFSGGPFRWVDWYGADKLVQKMLSYENLYGAPFRPCQ 126
L++ I+ SP DGD+GA+FG+GFPPF GGPF ++D GA LV+ + SY++ +G F PC+
Sbjct: 634 LDDGIIASPRDGDIGAIFGIGFPPFLGGPFHYIDTLGAANLVKILESYQSQFGNRFEPCE 693
Query: 127 LLLDHAKDSSKKF 139
L A+++ F
Sbjct: 694 RLKTMARENVSFF 706
>sp|A4TM82|FADJ_YERPP Fatty acid oxidation complex subunit alpha OS=Yersinia pestis
(strain Pestoides F) GN=fadJ PE=3 SV=1
Length = 774
Score = 110 bits (276), Expect = 2e-24, Method: Composition-based stats.
Identities = 58/157 (36%), Positives = 88/157 (56%), Gaps = 27/157 (17%)
Query: 8 GRKSGKGYFVYA-----------------------KGSKARPVNDGALAILKKYSLQPQS 44
GRK+G+G+++Y+ + +K +PV+ +L + P++
Sbjct: 609 GRKNGRGFYLYSNPTKNSSPTKNGNSPAKRNSFKWRKNKVKPVDASIYTLL---GVTPKA 665
Query: 45 ALKDEDLQLRMVSRFVNEAVLCLEETILNSPTDGDVGAVFGLGFPPFSGGPFRWVDWYGA 104
L + R +NEAV CL+E+I+ +P DGD+GAVFG+GFPPF GGPFR++D GA
Sbjct: 666 HLGAGVITQRCTMLMLNEAVRCLDESIIRNPRDGDIGAVFGIGFPPFLGGPFRYLDSLGA 725
Query: 105 DKLVQKMLSYENLYGAPFRPCQLLLDHAKDSSKKFYP 141
DK+VQ + YG F PCQ L+ A + ++FYP
Sbjct: 726 DKVVQALRLLVQQYGERFEPCQRLVTMA-EQQQQFYP 761
>sp|A1S7L6|FADJ_SHEAM Fatty acid oxidation complex subunit alpha OS=Shewanella
amazonensis (strain ATCC BAA-1098 / SB2B) GN=fadJ PE=3
SV=1
Length = 706
Score = 110 bits (275), Expect = 3e-24, Method: Composition-based stats.
Identities = 59/133 (44%), Positives = 84/133 (63%), Gaps = 3/133 (2%)
Query: 8 GRKSGKGYFVYAKGSKARPVNDGALAILKKYSLQPQSALKDEDLQLRMVSRFVNEAVLCL 67
GRK+GKG+++Y K +K D ++ L L P + + ++ R V + +NEAV CL
Sbjct: 577 GRKNGKGFYLYGKAAKKGKKVDESVYSL--LGLTPATGKEAGEIAERCVVQMLNEAVRCL 634
Query: 68 EETILNSPTDGDVGAVFGLGFPPFSGGPFRWVDWYGADKLVQKMLSYENLYGAPFRPCQL 127
EE I+ SP DGD+GA+FG+GFPPF GGPFR++D GA K+V+ + Y++ YG F P L
Sbjct: 635 EEGIIASPRDGDIGAIFGIGFPPFLGGPFRYMDTLGAAKMVRLLEGYQSKYGDRFAPAAL 694
Query: 128 LLDHAKDSSKKFY 140
L A + K FY
Sbjct: 695 LKAMAAE-GKTFY 706
>sp|Q1CHK2|FADJ_YERPN Fatty acid oxidation complex subunit alpha OS=Yersinia pestis bv.
Antiqua (strain Nepal516) GN=fadJ PE=3 SV=2
Length = 747
Score = 110 bits (274), Expect = 3e-24, Method: Composition-based stats.
Identities = 58/157 (36%), Positives = 88/157 (56%), Gaps = 27/157 (17%)
Query: 8 GRKSGKGYFVYA-----------------------KGSKARPVNDGALAILKKYSLQPQS 44
GRK+G+G+++Y+ + +K +PV+ +L + P++
Sbjct: 582 GRKNGRGFYLYSNPTKNSSPTKNGNSPAKRNSFKWRKNKVKPVDASIYTLL---GVTPKA 638
Query: 45 ALKDEDLQLRMVSRFVNEAVLCLEETILNSPTDGDVGAVFGLGFPPFSGGPFRWVDWYGA 104
L + R +NEAV CL+E+I+ +P DGD+GAVFG+GFPPF GGPFR++D GA
Sbjct: 639 HLGAGVITQRCTMLMLNEAVRCLDESIIRNPRDGDIGAVFGIGFPPFLGGPFRYLDSLGA 698
Query: 105 DKLVQKMLSYENLYGAPFRPCQLLLDHAKDSSKKFYP 141
DK+VQ + YG F PCQ L+ A + ++FYP
Sbjct: 699 DKVVQALRLLVQQYGERFEPCQRLVTMA-EQQQQFYP 734
>sp|Q8ZD45|FADJ_YERPE Fatty acid oxidation complex subunit alpha OS=Yersinia pestis
GN=fadJ PE=3 SV=2
Length = 747
Score = 110 bits (274), Expect = 3e-24, Method: Composition-based stats.
Identities = 58/157 (36%), Positives = 88/157 (56%), Gaps = 27/157 (17%)
Query: 8 GRKSGKGYFVYA-----------------------KGSKARPVNDGALAILKKYSLQPQS 44
GRK+G+G+++Y+ + +K +PV+ +L + P++
Sbjct: 582 GRKNGRGFYLYSNPTKNSSPTKNGNSPAKRNSFKWRKNKVKPVDASIYTLL---GVTPKA 638
Query: 45 ALKDEDLQLRMVSRFVNEAVLCLEETILNSPTDGDVGAVFGLGFPPFSGGPFRWVDWYGA 104
L + R +NEAV CL+E+I+ +P DGD+GAVFG+GFPPF GGPFR++D GA
Sbjct: 639 HLGAGVITQRCTMLMLNEAVRCLDESIIRNPRDGDIGAVFGIGFPPFLGGPFRYLDSLGA 698
Query: 105 DKLVQKMLSYENLYGAPFRPCQLLLDHAKDSSKKFYP 141
DK+VQ + YG F PCQ L+ A + ++FYP
Sbjct: 699 DKVVQALRLLVQQYGERFEPCQRLVTMA-EQQQQFYP 734
>sp|Q1C660|FADJ_YERPA Fatty acid oxidation complex subunit alpha OS=Yersinia pestis bv.
Antiqua (strain Antiqua) GN=fadJ PE=3 SV=2
Length = 747
Score = 110 bits (274), Expect = 3e-24, Method: Composition-based stats.
Identities = 58/157 (36%), Positives = 88/157 (56%), Gaps = 27/157 (17%)
Query: 8 GRKSGKGYFVYA-----------------------KGSKARPVNDGALAILKKYSLQPQS 44
GRK+G+G+++Y+ + +K +PV+ +L + P++
Sbjct: 582 GRKNGRGFYLYSNPTKNSSPTKNGNSPAKRNSFKWRKNKVKPVDASIYTLL---GVTPKA 638
Query: 45 ALKDEDLQLRMVSRFVNEAVLCLEETILNSPTDGDVGAVFGLGFPPFSGGPFRWVDWYGA 104
L + R +NEAV CL+E+I+ +P DGD+GAVFG+GFPPF GGPFR++D GA
Sbjct: 639 HLGAGVITQRCTMLMLNEAVRCLDESIIRNPRDGDIGAVFGIGFPPFLGGPFRYLDSLGA 698
Query: 105 DKLVQKMLSYENLYGAPFRPCQLLLDHAKDSSKKFYP 141
DK+VQ + YG F PCQ L+ A + ++FYP
Sbjct: 699 DKVVQALRLLVQQYGERFEPCQRLVTMA-EQQQQFYP 734
>sp|A7FGK1|FADJ_YERP3 Fatty acid oxidation complex subunit alpha OS=Yersinia
pseudotuberculosis serotype O:1b (strain IP 31758)
GN=fadJ PE=3 SV=1
Length = 747
Score = 110 bits (274), Expect = 3e-24, Method: Composition-based stats.
Identities = 58/157 (36%), Positives = 88/157 (56%), Gaps = 27/157 (17%)
Query: 8 GRKSGKGYFVYA-----------------------KGSKARPVNDGALAILKKYSLQPQS 44
GRK+G+G+++Y+ + +K +PV+ +L + P++
Sbjct: 582 GRKNGRGFYLYSNPTKNSSPTKNGNSPAKRNSFKWRKNKVKPVDASIYTLL---GVTPKA 638
Query: 45 ALKDEDLQLRMVSRFVNEAVLCLEETILNSPTDGDVGAVFGLGFPPFSGGPFRWVDWYGA 104
L + R +NEAV CL+E+I+ +P DGD+GAVFG+GFPPF GGPFR++D GA
Sbjct: 639 HLGAGVITQRCTMLMLNEAVRCLDESIIRNPRDGDIGAVFGIGFPPFLGGPFRYLDSLGA 698
Query: 105 DKLVQKMLSYENLYGAPFRPCQLLLDHAKDSSKKFYP 141
DK+VQ + YG F PCQ L+ A + ++FYP
Sbjct: 699 DKVVQALRLLVQQYGERFEPCQRLVTMA-EQQQQFYP 734
>sp|B7LLD0|FADJ_ESCF3 Fatty acid oxidation complex subunit alpha OS=Escherichia
fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73)
GN=fadJ PE=3 SV=1
Length = 714
Score = 109 bits (273), Expect = 4e-24, Method: Composition-based stats.
Identities = 55/127 (43%), Positives = 80/127 (62%), Gaps = 3/127 (2%)
Query: 8 GRKSGKGYFVY-AKGSKARPVNDGALAILKKYSLQPQSALKDEDLQLRMVSRFVNEAVLC 66
GRK+G+G+++Y AKG K++ D I K ++Q QS L + + R V +NEA C
Sbjct: 576 GRKNGRGFYLYGAKGRKSKKQVDPE--IYKIIAVQGQSKLSAQQITERCVMLMLNEAARC 633
Query: 67 LEETILNSPTDGDVGAVFGLGFPPFSGGPFRWVDWYGADKLVQKMLSYENLYGAPFRPCQ 126
E ++ DGD+GAVFG+GFPPF GGPFR++D GA ++V + +LYG+ F PC+
Sbjct: 634 YREGVIRHARDGDIGAVFGIGFPPFLGGPFRYMDSLGASEVVAVLQRLTSLYGSRFTPCE 693
Query: 127 LLLDHAK 133
LL A+
Sbjct: 694 QLLQMAE 700
>sp|Q668V1|FADJ_YERPS Fatty acid oxidation complex subunit alpha OS=Yersinia
pseudotuberculosis serotype I (strain IP32953) GN=fadJ
PE=3 SV=2
Length = 753
Score = 108 bits (270), Expect = 1e-23, Method: Composition-based stats.
Identities = 58/163 (35%), Positives = 88/163 (53%), Gaps = 33/163 (20%)
Query: 8 GRKSGKGYFVYA-----------------------------KGSKARPVNDGALAILKKY 38
GRK+G+G+++Y+ + +K +PV+ +L
Sbjct: 582 GRKNGRGFYLYSNPTLHSNSTKNSSPTKNGNSPAKRNSFKWRKNKVKPVDSSIYTLL--- 638
Query: 39 SLQPQSALKDEDLQLRMVSRFVNEAVLCLEETILNSPTDGDVGAVFGLGFPPFSGGPFRW 98
+ P++ L + R +NEAV CL+E+I+ +P DGD+GAVFG+GFPPF GGPFR+
Sbjct: 639 GVTPKAHLGAGVITQRCTMLMLNEAVRCLDESIIRNPRDGDIGAVFGIGFPPFLGGPFRY 698
Query: 99 VDWYGADKLVQKMLSYENLYGAPFRPCQLLLDHAKDSSKKFYP 141
+D GADK+VQ + YG F PCQ L+ A + ++FYP
Sbjct: 699 LDSLGADKVVQALRLLVQQYGERFEPCQRLVTMA-EQQQQFYP 740
>sp|B1LME7|FADJ_ECOSM Fatty acid oxidation complex subunit alpha OS=Escherichia coli
(strain SMS-3-5 / SECEC) GN=fadJ PE=3 SV=1
Length = 714
Score = 107 bits (267), Expect = 2e-23, Method: Composition-based stats.
Identities = 55/127 (43%), Positives = 79/127 (62%), Gaps = 3/127 (2%)
Query: 8 GRKSGKGYFVYA-KGSKARPVNDGALAILKKYSLQPQSALKDEDLQLRMVSRFVNEAVLC 66
GRK+G+G+++Y KG K++ D A+ L Q Q L + R V +NEAV C
Sbjct: 576 GRKNGRGFYLYGQKGRKSKKQVDPAIYPL--IGAQGQGRLSAPQVAERCVMLMLNEAVRC 633
Query: 67 LEETILNSPTDGDVGAVFGLGFPPFSGGPFRWVDWYGADKLVQKMLSYENLYGAPFRPCQ 126
L+E ++ S DGD+GAVFG+GFPPF GGPFR++D GA ++V M YG+ F PC+
Sbjct: 634 LDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCE 693
Query: 127 LLLDHAK 133
L++ +K
Sbjct: 694 RLVEMSK 700
>sp|B7NP24|FADJ_ECO7I Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O7:K1 (strain IAI39 / ExPEC) GN=fadJ PE=3 SV=1
Length = 714
Score = 107 bits (266), Expect = 3e-23, Method: Composition-based stats.
Identities = 55/127 (43%), Positives = 79/127 (62%), Gaps = 3/127 (2%)
Query: 8 GRKSGKGYFVYA-KGSKARPVNDGALAILKKYSLQPQSALKDEDLQLRMVSRFVNEAVLC 66
GRK+G+G+++Y KG K++ D A+ L Q Q L + R V +NEAV C
Sbjct: 576 GRKNGRGFYLYGQKGRKSKKQVDPAIYPL--IGAQGQGRLSAPQVAERCVMLMLNEAVRC 633
Query: 67 LEETILNSPTDGDVGAVFGLGFPPFSGGPFRWVDWYGADKLVQKMLSYENLYGAPFRPCQ 126
L+E ++ S DGD+GAVFG+GFPPF GGPFR++D GA ++V M YG+ F PC+
Sbjct: 634 LDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCE 693
Query: 127 LLLDHAK 133
L++ +K
Sbjct: 694 RLVEMSK 700
>sp|B7N5V2|FADJ_ECOLU Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O17:K52:H18 (strain UMN026 / ExPEC) GN=fadJ PE=3 SV=1
Length = 714
Score = 107 bits (266), Expect = 3e-23, Method: Composition-based stats.
Identities = 55/127 (43%), Positives = 79/127 (62%), Gaps = 3/127 (2%)
Query: 8 GRKSGKGYFVYA-KGSKARPVNDGALAILKKYSLQPQSALKDEDLQLRMVSRFVNEAVLC 66
GRK+G+G+++Y KG K++ D A+ L Q Q L + R V +NEAV C
Sbjct: 576 GRKNGRGFYLYGQKGRKSKKQVDPAIYPL--IGTQGQGRLSAPQVAERCVMLMLNEAVRC 633
Query: 67 LEETILNSPTDGDVGAVFGLGFPPFSGGPFRWVDWYGADKLVQKMLSYENLYGAPFRPCQ 126
L+E ++ S DGD+GAVFG+GFPPF GGPFR++D GA ++V M YG+ F PC+
Sbjct: 634 LDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCE 693
Query: 127 LLLDHAK 133
L++ +K
Sbjct: 694 RLVEMSK 700
>sp|A8ADP2|FADJ_CITK8 Fatty acid oxidation complex subunit alpha OS=Citrobacter koseri
(strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=fadJ
PE=3 SV=1
Length = 715
Score = 107 bits (266), Expect = 3e-23, Method: Composition-based stats.
Identities = 56/136 (41%), Positives = 82/136 (60%), Gaps = 4/136 (2%)
Query: 8 GRKSGKGYFVYA-KGSKARPVNDGALAILKKYSLQPQSALKDEDLQLRMVSRFVNEAVLC 66
GRK+G+G+++Y KG K++ D A I + Q QS L + + R V +NEA C
Sbjct: 576 GRKNGRGFYLYGVKGRKSKKQVDPA--IYRLIGTQGQSRLSAQQMAERCVMLMLNEAARC 633
Query: 67 LEETILNSPTDGDVGAVFGLGFPPFSGGPFRWVDWYGADKLVQKMLSYENLYGAPFRPCQ 126
+E ++ S DGD+GAVFG+GFPPF GGPFR++D GA ++V + YG F PC+
Sbjct: 634 FDEKVIRSARDGDIGAVFGIGFPPFLGGPFRYMDTLGAGEVVAVLQRLATQYGDRFTPCE 693
Query: 127 LLLDHAKDSSKKFYPS 142
LL A + ++F+ S
Sbjct: 694 RLLRMA-ERGERFWNS 708
>sp|Q8FFG4|FADJ_ECOL6 Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=fadJ PE=3
SV=1
Length = 714
Score = 106 bits (265), Expect = 3e-23, Method: Composition-based stats.
Identities = 55/127 (43%), Positives = 79/127 (62%), Gaps = 3/127 (2%)
Query: 8 GRKSGKGYFVYA-KGSKARPVNDGALAILKKYSLQPQSALKDEDLQLRMVSRFVNEAVLC 66
GRK+G+G+++Y KG K++ D A+ L Q Q L + R V +NEAV C
Sbjct: 576 GRKNGRGFYLYGQKGRKSKKQVDPAIYPL--IGAQGQGRLSAPQVAERCVMLMLNEAVRC 633
Query: 67 LEETILNSPTDGDVGAVFGLGFPPFSGGPFRWVDWYGADKLVQKMLSYENLYGAPFRPCQ 126
L+E ++ S DGD+GAVFG+GFPPF GGPFR++D GA ++V M YG+ F PC+
Sbjct: 634 LDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCE 693
Query: 127 LLLDHAK 133
L++ +K
Sbjct: 694 RLVEMSK 700
>sp|A7MH81|FADJ_CROS8 Fatty acid oxidation complex subunit alpha OS=Cronobacter sakazakii
(strain ATCC BAA-894) GN=fadJ PE=3 SV=1
Length = 717
Score = 106 bits (264), Expect = 5e-23, Method: Composition-based stats.
Identities = 54/127 (42%), Positives = 77/127 (60%), Gaps = 3/127 (2%)
Query: 8 GRKSGKGYFVY-AKGSKARPVNDGALAILKKYSLQPQSALKDEDLQLRMVSRFVNEAVLC 66
GRK+G+G+++Y AKG K++ D A+ L ++P L E++ R V +NEA C
Sbjct: 576 GRKNGRGFYLYPAKGRKSKKQVDPAVYGL--IGVKPGGKLSGEEIAERCVMMMLNEAARC 633
Query: 67 LEETILNSPTDGDVGAVFGLGFPPFSGGPFRWVDWYGADKLVQKMLSYENLYGAPFRPCQ 126
L+E ++ S DGD+GAVFG+GFPPF GGPFR++D GA + + YG F PC
Sbjct: 634 LDEGVVRSARDGDIGAVFGIGFPPFLGGPFRYMDTLGAAAMATTLTRLATRYGDRFTPCD 693
Query: 127 LLLDHAK 133
LL A+
Sbjct: 694 RLLRMAQ 700
>sp|Q8ZNA7|FADJ_SALTY Fatty acid oxidation complex subunit alpha OS=Salmonella
typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
GN=fadJ PE=3 SV=1
Length = 715
Score = 105 bits (263), Expect = 6e-23, Method: Composition-based stats.
Identities = 53/127 (41%), Positives = 78/127 (61%), Gaps = 3/127 (2%)
Query: 8 GRKSGKGYFVYA-KGSKARPVNDGALAILKKYSLQPQSALKDEDLQLRMVSRFVNEAVLC 66
GRK+G+G+++Y KG K++ D A I K +Q QS L + + R V +NEA C
Sbjct: 576 GRKNGRGFYLYGEKGRKSKKQVDPA--IYKLIGVQGQSRLSAQQVAERCVMLMLNEAARC 633
Query: 67 LEETILNSPTDGDVGAVFGLGFPPFSGGPFRWVDWYGADKLVQKMLSYENLYGAPFRPCQ 126
+E ++ S DGD+GAVFG+GFPPF GGPFR++D G ++V + LYG + PC+
Sbjct: 634 FDEKVIRSARDGDIGAVFGIGFPPFLGGPFRYMDALGPGEMVATLQRLAALYGPRYAPCE 693
Query: 127 LLLDHAK 133
L+ A+
Sbjct: 694 QLVRMAE 700
>sp|B5BBA1|FADJ_SALPK Fatty acid oxidation complex subunit alpha OS=Salmonella paratyphi
A (strain AKU_12601) GN=fadJ PE=3 SV=1
Length = 715
Score = 105 bits (263), Expect = 6e-23, Method: Composition-based stats.
Identities = 53/127 (41%), Positives = 78/127 (61%), Gaps = 3/127 (2%)
Query: 8 GRKSGKGYFVYA-KGSKARPVNDGALAILKKYSLQPQSALKDEDLQLRMVSRFVNEAVLC 66
GRK+G+G+++Y KG K++ D A I K +Q QS L + + R V +NEA C
Sbjct: 576 GRKNGRGFYLYGEKGRKSKKQVDPA--IYKLIGVQGQSRLSAQQVAERCVMLMLNEAARC 633
Query: 67 LEETILNSPTDGDVGAVFGLGFPPFSGGPFRWVDWYGADKLVQKMLSYENLYGAPFRPCQ 126
+E ++ S DGD+GAVFG+GFPPF GGPFR++D G ++V + LYG + PC+
Sbjct: 634 FDEKVIRSARDGDIGAVFGIGFPPFLGGPFRYMDALGPGEMVATLQRLAALYGPRYAPCE 693
Query: 127 LLLDHAK 133
L+ A+
Sbjct: 694 QLVRMAE 700
>sp|Q5PCX6|FADJ_SALPA Fatty acid oxidation complex subunit alpha OS=Salmonella paratyphi
A (strain ATCC 9150 / SARB42) GN=fadJ PE=3 SV=1
Length = 715
Score = 105 bits (263), Expect = 6e-23, Method: Composition-based stats.
Identities = 53/127 (41%), Positives = 78/127 (61%), Gaps = 3/127 (2%)
Query: 8 GRKSGKGYFVYA-KGSKARPVNDGALAILKKYSLQPQSALKDEDLQLRMVSRFVNEAVLC 66
GRK+G+G+++Y KG K++ D A I K +Q QS L + + R V +NEA C
Sbjct: 576 GRKNGRGFYLYGEKGRKSKKQVDPA--IYKLIGVQGQSRLSAQQVAERCVMLMLNEAARC 633
Query: 67 LEETILNSPTDGDVGAVFGLGFPPFSGGPFRWVDWYGADKLVQKMLSYENLYGAPFRPCQ 126
+E ++ S DGD+GAVFG+GFPPF GGPFR++D G ++V + LYG + PC+
Sbjct: 634 FDEKVIRSARDGDIGAVFGIGFPPFLGGPFRYMDALGPGEMVATLQRLAALYGPRYAPCE 693
Query: 127 LLLDHAK 133
L+ A+
Sbjct: 694 QLVRMAE 700
>sp|B4SZR0|FADJ_SALNS Fatty acid oxidation complex subunit alpha OS=Salmonella newport
(strain SL254) GN=fadJ PE=3 SV=1
Length = 715
Score = 105 bits (263), Expect = 6e-23, Method: Composition-based stats.
Identities = 53/127 (41%), Positives = 78/127 (61%), Gaps = 3/127 (2%)
Query: 8 GRKSGKGYFVYA-KGSKARPVNDGALAILKKYSLQPQSALKDEDLQLRMVSRFVNEAVLC 66
GRK+G+G+++Y KG K++ D A I K +Q QS L + + R V +NEA C
Sbjct: 576 GRKNGRGFYLYGEKGRKSKKQVDPA--IYKLIGVQGQSRLSAQQVAERCVMLMLNEAARC 633
Query: 67 LEETILNSPTDGDVGAVFGLGFPPFSGGPFRWVDWYGADKLVQKMLSYENLYGAPFRPCQ 126
+E ++ S DGD+GAVFG+GFPPF GGPFR++D G ++V + LYG + PC+
Sbjct: 634 FDEKVIRSARDGDIGAVFGIGFPPFLGGPFRYMDALGPGEMVATLQRLAALYGPRYAPCE 693
Query: 127 LLLDHAK 133
L+ A+
Sbjct: 694 QLVRMAE 700
>sp|B5R3R9|FADJ_SALEP Fatty acid oxidation complex subunit alpha OS=Salmonella
enteritidis PT4 (strain P125109) GN=fadJ PE=3 SV=1
Length = 715
Score = 105 bits (263), Expect = 6e-23, Method: Composition-based stats.
Identities = 53/127 (41%), Positives = 78/127 (61%), Gaps = 3/127 (2%)
Query: 8 GRKSGKGYFVYA-KGSKARPVNDGALAILKKYSLQPQSALKDEDLQLRMVSRFVNEAVLC 66
GRK+G+G+++Y KG K++ D A I K +Q QS L + + R V +NEA C
Sbjct: 576 GRKNGRGFYLYGEKGRKSKKQVDPA--IYKLIGVQGQSRLSAQQVAERCVMLMLNEAARC 633
Query: 67 LEETILNSPTDGDVGAVFGLGFPPFSGGPFRWVDWYGADKLVQKMLSYENLYGAPFRPCQ 126
+E ++ S DGD+GAVFG+GFPPF GGPFR++D G ++V + LYG + PC+
Sbjct: 634 FDEKVIRSARDGDIGAVFGIGFPPFLGGPFRYMDALGPGEMVATLQRLAALYGPRYAPCE 693
Query: 127 LLLDHAK 133
L+ A+
Sbjct: 694 QLVRMAE 700
>sp|B5FPN1|FADJ_SALDC Fatty acid oxidation complex subunit alpha OS=Salmonella dublin
(strain CT_02021853) GN=fadJ PE=3 SV=1
Length = 715
Score = 105 bits (263), Expect = 6e-23, Method: Composition-based stats.
Identities = 53/127 (41%), Positives = 78/127 (61%), Gaps = 3/127 (2%)
Query: 8 GRKSGKGYFVYA-KGSKARPVNDGALAILKKYSLQPQSALKDEDLQLRMVSRFVNEAVLC 66
GRK+G+G+++Y KG K++ D A I K +Q QS L + + R V +NEA C
Sbjct: 576 GRKNGRGFYLYGEKGRKSKKQVDPA--IYKLIGVQGQSRLSAQQVAERCVMLMLNEAARC 633
Query: 67 LEETILNSPTDGDVGAVFGLGFPPFSGGPFRWVDWYGADKLVQKMLSYENLYGAPFRPCQ 126
+E ++ S DGD+GAVFG+GFPPF GGPFR++D G ++V + LYG + PC+
Sbjct: 634 FDEKVIRSARDGDIGAVFGIGFPPFLGGPFRYMDALGPGEMVATLQRLAALYGPRYAPCE 693
Query: 127 LLLDHAK 133
L+ A+
Sbjct: 694 QLVRMAE 700
>sp|Q8Z4Z0|FADJ_SALTI Fatty acid oxidation complex subunit alpha OS=Salmonella typhi
GN=fadJ PE=3 SV=1
Length = 715
Score = 105 bits (263), Expect = 6e-23, Method: Composition-based stats.
Identities = 53/127 (41%), Positives = 78/127 (61%), Gaps = 3/127 (2%)
Query: 8 GRKSGKGYFVYA-KGSKARPVNDGALAILKKYSLQPQSALKDEDLQLRMVSRFVNEAVLC 66
GRK+G+G+++Y KG K++ D A I K +Q QS L + + R V +NEA C
Sbjct: 576 GRKNGRGFYLYGEKGRKSKKQVDPA--IYKLIGVQGQSRLSAQQVAERCVMLMLNEAARC 633
Query: 67 LEETILNSPTDGDVGAVFGLGFPPFSGGPFRWVDWYGADKLVQKMLSYENLYGAPFRPCQ 126
+E ++ S DGD+GAVFG+GFPPF GGPFR++D G ++V + LYG + PC+
Sbjct: 634 FDEKVIRSARDGDIGAVFGIGFPPFLGGPFRYMDALGPGEMVATLQRLAALYGPRYAPCE 693
Query: 127 LLLDHAK 133
L+ A+
Sbjct: 694 QLVRMAE 700
>sp|A9N453|FADJ_SALPB Fatty acid oxidation complex subunit alpha OS=Salmonella paratyphi
B (strain ATCC BAA-1250 / SPB7) GN=fadJ PE=3 SV=1
Length = 715
Score = 105 bits (263), Expect = 6e-23, Method: Composition-based stats.
Identities = 53/127 (41%), Positives = 78/127 (61%), Gaps = 3/127 (2%)
Query: 8 GRKSGKGYFVYA-KGSKARPVNDGALAILKKYSLQPQSALKDEDLQLRMVSRFVNEAVLC 66
GRK+G+G+++Y KG K++ D A I K +Q QS L + + R V +NEA C
Sbjct: 576 GRKNGRGFYLYGEKGRKSKKQVDPA--IYKLIGVQGQSRLSAQQVAERCVMLMLNEAARC 633
Query: 67 LEETILNSPTDGDVGAVFGLGFPPFSGGPFRWVDWYGADKLVQKMLSYENLYGAPFRPCQ 126
+E ++ S DGD+GAVFG+GFPPF GGPFR++D G ++V + LYG + PC+
Sbjct: 634 FDEKVIRSARDGDIGAVFGIGFPPFLGGPFRYMDALGPGEMVATLQRLAALYGPRYAPCE 693
Query: 127 LLLDHAK 133
L+ A+
Sbjct: 694 QLVRMAE 700
>sp|B4TCA8|FADJ_SALHS Fatty acid oxidation complex subunit alpha OS=Salmonella heidelberg
(strain SL476) GN=fadJ PE=3 SV=1
Length = 715
Score = 105 bits (263), Expect = 6e-23, Method: Composition-based stats.
Identities = 53/127 (41%), Positives = 78/127 (61%), Gaps = 3/127 (2%)
Query: 8 GRKSGKGYFVYA-KGSKARPVNDGALAILKKYSLQPQSALKDEDLQLRMVSRFVNEAVLC 66
GRK+G+G+++Y KG K++ D A I K +Q QS L + + R V +NEA C
Sbjct: 576 GRKNGRGFYLYGEKGRKSKKQVDPA--IYKLIGVQGQSRLSAQQVAERCVMLMLNEAARC 633
Query: 67 LEETILNSPTDGDVGAVFGLGFPPFSGGPFRWVDWYGADKLVQKMLSYENLYGAPFRPCQ 126
+E ++ S DGD+GAVFG+GFPPF GGPFR++D G ++V + LYG + PC+
Sbjct: 634 FDEKVIRSARDGDIGAVFGIGFPPFLGGPFRYMDALGPGEMVATLQRLAALYGPRYAPCE 693
Query: 127 LLLDHAK 133
L+ A+
Sbjct: 694 QLVRMAE 700
>sp|B5RCL3|FADJ_SALG2 Fatty acid oxidation complex subunit alpha OS=Salmonella gallinarum
(strain 287/91 / NCTC 13346) GN=fadJ PE=3 SV=1
Length = 715
Score = 105 bits (263), Expect = 6e-23, Method: Composition-based stats.
Identities = 53/127 (41%), Positives = 78/127 (61%), Gaps = 3/127 (2%)
Query: 8 GRKSGKGYFVYA-KGSKARPVNDGALAILKKYSLQPQSALKDEDLQLRMVSRFVNEAVLC 66
GRK+G+G+++Y KG K++ D A I K +Q QS L + + R V +NEA C
Sbjct: 576 GRKNGRGFYLYGEKGRKSKKQVDPA--IYKLIGVQGQSRLSAQQVAERCVMLMLNEAARC 633
Query: 67 LEETILNSPTDGDVGAVFGLGFPPFSGGPFRWVDWYGADKLVQKMLSYENLYGAPFRPCQ 126
+E ++ S DGD+GAVFG+GFPPF GGPFR++D G ++V + LYG + PC+
Sbjct: 634 FDEKVIRSARDGDIGAVFGIGFPPFLGGPFRYMDALGPGEMVATLQRLAALYGPRYAPCE 693
Query: 127 LLLDHAK 133
L+ A+
Sbjct: 694 QLVRMAE 700
>sp|B5EZR9|FADJ_SALA4 Fatty acid oxidation complex subunit alpha OS=Salmonella agona
(strain SL483) GN=fadJ PE=3 SV=1
Length = 715
Score = 105 bits (263), Expect = 6e-23, Method: Composition-based stats.
Identities = 53/127 (41%), Positives = 78/127 (61%), Gaps = 3/127 (2%)
Query: 8 GRKSGKGYFVYA-KGSKARPVNDGALAILKKYSLQPQSALKDEDLQLRMVSRFVNEAVLC 66
GRK+G+G+++Y KG K++ D A I K +Q QS L + + R V +NEA C
Sbjct: 576 GRKNGRGFYLYGEKGRKSKKQVDPA--IYKLIGVQGQSRLSAQQVAERCVMLMLNEAARC 633
Query: 67 LEETILNSPTDGDVGAVFGLGFPPFSGGPFRWVDWYGADKLVQKMLSYENLYGAPFRPCQ 126
+E ++ S DGD+GAVFG+GFPPF GGPFR++D G ++V + LYG + PC+
Sbjct: 634 FDEKVIRSARDGDIGAVFGIGFPPFLGGPFRYMDALGPGEMVATLQRLAALYGPRYAPCE 693
Query: 127 LLLDHAK 133
L+ A+
Sbjct: 694 QLVRMAE 700
>sp|Q57LW6|FADJ_SALCH Fatty acid oxidation complex subunit alpha OS=Salmonella
choleraesuis (strain SC-B67) GN=fadJ PE=3 SV=1
Length = 715
Score = 105 bits (263), Expect = 6e-23, Method: Composition-based stats.
Identities = 53/127 (41%), Positives = 78/127 (61%), Gaps = 3/127 (2%)
Query: 8 GRKSGKGYFVYA-KGSKARPVNDGALAILKKYSLQPQSALKDEDLQLRMVSRFVNEAVLC 66
GRK+G+G+++Y KG K++ D A I K +Q QS L + + R V +NEA C
Sbjct: 576 GRKNGRGFYLYGEKGRKSKKQVDPA--IYKLIGVQGQSRLSAQQVAERCVMLMLNEAARC 633
Query: 67 LEETILNSPTDGDVGAVFGLGFPPFSGGPFRWVDWYGADKLVQKMLSYENLYGAPFRPCQ 126
+E ++ S DGD+GAVFG+GFPPF GGPFR++D G ++V + LYG + PC+
Sbjct: 634 FDEKVIRSARDGDIGAVFGIGFPPFLGGPFRYMDALGPGEMVATLQRLAALYGPRYAPCE 693
Query: 127 LLLDHAK 133
L+ A+
Sbjct: 694 QLVRMAE 700
>sp|B1IXA5|FADJ_ECOLC Fatty acid oxidation complex subunit alpha OS=Escherichia coli
(strain ATCC 8739 / DSM 1576 / Crooks) GN=fadJ PE=3 SV=1
Length = 714
Score = 105 bits (263), Expect = 7e-23, Method: Composition-based stats.
Identities = 54/127 (42%), Positives = 79/127 (62%), Gaps = 3/127 (2%)
Query: 8 GRKSGKGYFVYA-KGSKARPVNDGALAILKKYSLQPQSALKDEDLQLRMVSRFVNEAVLC 66
GRK+G+G+++Y KG K++ D A+ L Q Q L + R V +NEAV C
Sbjct: 576 GRKNGRGFYLYGQKGRKSKKQVDPAIYPL--IGAQGQGRLSAPQVAERCVMLMLNEAVRC 633
Query: 67 LEETILNSPTDGDVGAVFGLGFPPFSGGPFRWVDWYGADKLVQKMLSYENLYGAPFRPCQ 126
++E ++ S DGD+GAVFG+GFPPF GGPFR++D GA ++V M YG+ F PC+
Sbjct: 634 VDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCE 693
Query: 127 LLLDHAK 133
L++ +K
Sbjct: 694 RLVEMSK 700
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.140 0.447
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,972,253
Number of Sequences: 539616
Number of extensions: 2442147
Number of successful extensions: 5163
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 216
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 4781
Number of HSP's gapped (non-prelim): 229
length of query: 142
length of database: 191,569,459
effective HSP length: 105
effective length of query: 37
effective length of database: 134,909,779
effective search space: 4991661823
effective search space used: 4991661823
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)