Your job contains 1 sequence.
>psy9058
MPFWCPPGRKSGKGYFVYAKGSKARPVNDGALAILKKYSLQPQSALKDEDLQLRMVSRFV
NEAVLCLEETILNSPTDGDVGAVFGLGFPPFSGGPFRWVDWYGADKLVQKMLSYENLYGA
PFRPCQLLLDHAKDSSKKFYPS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy9058
(142 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0028479 - symbol:Mtpalpha "Mitochondrial trifuncti... 393 1.3e-35 1
ZFIN|ZDB-GENE-041111-204 - symbol:hadhab "hydroxyacyl-Coe... 367 7.5e-33 1
ZFIN|ZDB-GENE-031222-5 - symbol:hadhaa "hydroxyacyl-Coenz... 357 9.1e-32 1
MGI|MGI:2135593 - symbol:Hadha "hydroxyacyl-Coenzyme A de... 336 1.7e-29 1
UNIPROTKB|P40939 - symbol:HADHA "Trifunctional enzyme sub... 332 4.5e-29 1
WB|WBGene00020347 - symbol:T08B2.7 species:6239 "Caenorha... 332 4.8e-29 1
UNIPROTKB|Q29554 - symbol:HADHA "Trifunctional enzyme sub... 326 2.0e-28 1
UNIPROTKB|Q3SZ00 - symbol:HADHA "HADHA protein" species:9... 325 2.6e-28 1
UNIPROTKB|F1PIP0 - symbol:HADHA "Uncharacterized protein"... 323 4.0e-28 1
RGD|620512 - symbol:Hadha "hydroxyacyl-CoA dehydrogenase/... 314 4.0e-27 1
WB|WBGene00001150 - symbol:ech-1 species:6239 "Caenorhabd... 291 1.2e-24 1
UNIPROTKB|H0YFD6 - symbol:HADHA "Trifunctional enzyme sub... 211 1.4e-20 2
UNIPROTKB|Q9KT58 - symbol:fadJ "Fatty acid oxidation comp... 232 2.3e-18 1
TIGR_CMR|VC_1047 - symbol:VC_1047 "fatty oxidation comple... 232 2.3e-18 1
TIGR_CMR|SO_3088 - symbol:SO_3088 "fatty oxidation comple... 193 3.5e-14 1
UNIPROTKB|P77399 - symbol:fadJ "FadJ monomer" species:833... 172 6.3e-12 1
UNIPROTKB|P21177 - symbol:fadB "dodecenoyl-CoA delta-isom... 154 5.5e-10 1
UNIPROTKB|F1NI29 - symbol:HADHA "Uncharacterized protein"... 149 1.8e-09 1
UNIPROTKB|Q8W1L6 - symbol:MFP "Peroxisomal fatty acid bet... 141 1.4e-08 1
UNIPROTKB|Q48GW3 - symbol:fadB "Fatty acid oxidation comp... 137 3.6e-08 1
UNIPROTKB|Q9KNI1 - symbol:fadB "Fatty acid oxidation comp... 136 4.6e-08 1
TIGR_CMR|VC_2758 - symbol:VC_2758 "fatty oxidation comple... 136 4.6e-08 1
UNIPROTKB|Q47ZB7 - symbol:fadJ "Fatty oxidation complex, ... 136 5.2e-08 1
TIGR_CMR|CPS_3156 - symbol:CPS_3156 "fatty oxidation comp... 136 5.2e-08 1
UNIPROTKB|P28793 - symbol:fadB "Fatty acid oxidation comp... 134 7.4e-08 1
TAIR|locus:2119891 - symbol:AIM1 "ABNORMAL INFLORESCENCE ... 130 2.0e-07 1
TIGR_CMR|SPO_0772 - symbol:SPO_0772 "enoyl-CoA hydratase/... 129 2.5e-07 1
TIGR_CMR|SPO_A0424 - symbol:SPO_A0424 "fatty oxidation co... 126 5.3e-07 1
UNIPROTKB|Q489W3 - symbol:fadB "Fatty acid oxidation comp... 123 1.1e-06 1
TIGR_CMR|CPS_0393 - symbol:CPS_0393 "fatty oxidation comp... 123 1.1e-06 1
TIGR_CMR|SO_0021 - symbol:SO_0021 "fatty oxidation comple... 122 1.4e-06 1
UNIPROTKB|Q39659 - symbol:Q39659 "Glyoxysomal fatty acid ... 112 1.7e-05 1
TIGR_CMR|SPO_2920 - symbol:SPO_2920 "fatty oxidation comp... 111 2.2e-05 1
>FB|FBgn0028479 [details] [associations]
symbol:Mtpalpha "Mitochondrial trifunctional protein alpha
subunit" species:7227 "Drosophila melanogaster" [GO:0016507
"mitochondrial fatty acid beta-oxidation multienzyme complex"
evidence=ISS] [GO:0016509 "long-chain-3-hydroxyacyl-CoA
dehydrogenase activity" evidence=ISS] [GO:0016508
"long-chain-enoyl-CoA hydratase activity" evidence=ISS] [GO:0006635
"fatty acid beta-oxidation" evidence=ISS;IMP] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003857 "3-hydroxyacyl-CoA
dehydrogenase activity" evidence=IEA] [GO:0004300 "enoyl-CoA
hydratase activity" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0005811
"lipid particle" evidence=IDA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0042060 "wound healing" evidence=IMP]
[GO:0042594 "response to starvation" evidence=IMP] [GO:0008340
"determination of adult lifespan" evidence=IMP] InterPro:IPR001753
InterPro:IPR006108 InterPro:IPR006176 InterPro:IPR008927
InterPro:IPR012803 InterPro:IPR013328 InterPro:IPR018376
Pfam:PF00378 Pfam:PF00725 Pfam:PF02737 PROSITE:PS00166
InterPro:IPR016040 GO:GO:0005739 GO:GO:0008340 GO:GO:0005875
EMBL:AE014134 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
Gene3D:1.10.1040.10 SUPFAM:SSF48179 GO:GO:0005811 GO:GO:0042594
GO:GO:0006635 GO:GO:0042060 HSSP:P00348 GO:GO:0003857 GO:GO:0004300
GO:GO:0016508 KO:K07515 GO:GO:0016507 GO:GO:0016509
TIGRFAMs:TIGR02441 GeneTree:ENSGT00700000104363 UniGene:Dm.6965
GeneID:34276 KEGG:dme:Dmel_CG4389 FlyBase:FBgn0028479
GenomeRNAi:34276 NextBio:787695 EMBL:AF181648 RefSeq:NP_609299.1
SMR:Q9V397 MINT:MINT-331816 STRING:Q9V397
EnsemblMetazoa:FBtr0079858 UCSC:CG4389-RA InParanoid:Q9V397
OMA:HAEVSER Uniprot:Q9V397
Length = 783
Score = 393 (143.4 bits), Expect = 1.3e-35, P = 1.3e-35
Identities = 86/137 (62%), Positives = 95/137 (69%)
Query: 8 GRKSGKGYFVYAKGSK--ARPVNDGALAILK-KYSLQPQSALKDEDLQLRMVSRFVNEAV 64
GRKSGKG F+Y G K RPVN+ AL I+K KY+L + A EDL LRMVSRF+NEAV
Sbjct: 641 GRKSGKGIFLY-DGQKRGTRPVNNDALEIVKQKYALVSKGANAPEDLTLRMVSRFINEAV 699
Query: 65 LCLEETILNSPTDGDVGAVXXXXXXXXXXXXXRWVDWYGADKLVQKMLSYENLYGAPFRP 124
LCLEE IL+SP +GDVGAV RWVD YGA KLV KM SY LYGAPF+P
Sbjct: 700 LCLEEKILDSPLEGDVGAVFGLGFPPFSGGPFRWVDQYGAGKLVSKMQSYAELYGAPFKP 759
Query: 125 CQLLLDHAKDSSKKFYP 141
Q LLD AKD SKKFYP
Sbjct: 760 AQTLLDMAKDPSKKFYP 776
>ZFIN|ZDB-GENE-041111-204 [details] [associations]
symbol:hadhab "hydroxyacyl-Coenzyme A
dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A
hydratase, alpha subunit b" species:7955 "Danio rerio" [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003857 "3-hydroxyacyl-CoA dehydrogenase
activity" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0004300 "enoyl-CoA hydratase activity"
evidence=IEA] [GO:0006631 "fatty acid metabolic process"
evidence=IEA] [GO:0008152 "metabolic process" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0016507 "mitochondrial fatty acid
beta-oxidation multienzyme complex" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0006635 "fatty acid
beta-oxidation" evidence=IEA] InterPro:IPR001753 InterPro:IPR006108
InterPro:IPR006176 InterPro:IPR006180 InterPro:IPR008927
InterPro:IPR012803 InterPro:IPR013328 InterPro:IPR018376
Pfam:PF00378 Pfam:PF00725 Pfam:PF02737 PROSITE:PS00067
PROSITE:PS00166 InterPro:IPR016040 ZFIN:ZDB-GENE-041111-204
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 Gene3D:1.10.1040.10
SUPFAM:SSF48179 GO:GO:0006635 GO:GO:0003857 GO:GO:0004300
GO:GO:0016507 TIGRFAMs:TIGR02441 GeneTree:ENSGT00700000104363
EMBL:CR318625 IPI:IPI00801488 Ensembl:ENSDART00000076009
OMA:HPKFAAN ArrayExpress:F1QYX8 Bgee:F1QYX8 Uniprot:F1QYX8
Length = 763
Score = 367 (134.2 bits), Expect = 7.5e-33, P = 7.5e-33
Identities = 75/134 (55%), Positives = 93/134 (69%)
Query: 8 GRKSGKGYFVYAKGSKARPVNDGALAILKKYSLQPQSALK-DEDLQLRMVSRFVNEAVLC 66
GRKSGKG +VY G K R VN AL IL+ Y L P +A+ D D+Q R+VSRFVNEAVLC
Sbjct: 629 GRKSGKGCYVYQPGLKRRDVNTEALEILEAYKLTPNAAISSDSDIQYRLVSRFVNEAVLC 688
Query: 67 LEETILNSPTDGDVGAVXXXXXXXXXXXXXRWVDWYGADKLVQKMLSYENLYGAPFRPCQ 126
L+E IL +P +GD+GAV R+VD +GADKLV+KM +E ++G F PCQ
Sbjct: 689 LQEGILANPVEGDIGAVFGLGFPPCLGGPFRFVDSFGADKLVEKMRRFEEVFGNQFTPCQ 748
Query: 127 LLLDHAKDSSKKFY 140
LLLDHA+D SKKF+
Sbjct: 749 LLLDHARDPSKKFH 762
>ZFIN|ZDB-GENE-031222-5 [details] [associations]
symbol:hadhaa "hydroxyacyl-Coenzyme A
dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A
hydratase, alpha subunit a" species:7955 "Danio rerio" [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003857 "3-hydroxyacyl-CoA dehydrogenase
activity" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0004300 "enoyl-CoA hydratase activity"
evidence=IEA] [GO:0006631 "fatty acid metabolic process"
evidence=IEA] [GO:0008152 "metabolic process" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0016507 "mitochondrial fatty acid
beta-oxidation multienzyme complex" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0006635 "fatty acid
beta-oxidation" evidence=IEA] [GO:0009617 "response to bacterium"
evidence=IDA] InterPro:IPR001753 InterPro:IPR006108
InterPro:IPR006176 InterPro:IPR006180 InterPro:IPR008927
InterPro:IPR012803 InterPro:IPR013328 InterPro:IPR018376
Pfam:PF00378 Pfam:PF00725 Pfam:PF02737 PROSITE:PS00067
PROSITE:PS00166 InterPro:IPR016040 ZFIN:ZDB-GENE-031222-5
GO:GO:0009617 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
Gene3D:1.10.1040.10 SUPFAM:SSF48179 GO:GO:0006635 eggNOG:COG1250
GO:GO:0003857 GO:GO:0004300 HOGENOM:HOG000261346 HOVERGEN:HBG005557
KO:K07515 OrthoDB:EOG4FBHSD GO:GO:0016507 TIGRFAMs:TIGR02441
GeneTree:ENSGT00700000104363 EMBL:CU138532 EMBL:CU929140
EMBL:BC115212 IPI:IPI00868406 RefSeq:NP_001098746.1 UniGene:Dr.765
STRING:A7YT47 Ensembl:ENSDART00000079734 GeneID:553401
KEGG:dre:553401 CTD:553401 NextBio:20880159 Uniprot:A7YT47
Length = 761
Score = 357 (130.7 bits), Expect = 9.1e-32, P = 9.1e-32
Identities = 74/134 (55%), Positives = 90/134 (67%)
Query: 8 GRKSGKGYFVYAKGSKARPVNDGALAILKKYSLQ-PQSALKDEDLQLRMVSRFVNEAVLC 66
GRKSGKG +VY SK + VN A ILK + L P + DED+Q R+VSRFVNEAVLC
Sbjct: 627 GRKSGKGCYVYGAKSKEKKVNSEAEEILKSFKLTAPPAVSSDEDIQYRLVSRFVNEAVLC 686
Query: 67 LEETILNSPTDGDVGAVXXXXXXXXXXXXXRWVDWYGADKLVQKMLSYENLYGAPFRPCQ 126
L+E IL P GD+GAV R+VD YGADKL+QKM +E +YG F PCQ
Sbjct: 687 LQEGILADPIQGDIGAVFGLGFPPCLGGPFRFVDSYGADKLIQKMKRFEEVYGNQFSPCQ 746
Query: 127 LLLDHAKDSSKKFY 140
LLLDHAK++SK+F+
Sbjct: 747 LLLDHAKNTSKRFH 760
>MGI|MGI:2135593 [details] [associations]
symbol:Hadha "hydroxyacyl-Coenzyme A
dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A
hydratase (trifunctional protein), alpha subunit" species:10090
"Mus musculus" [GO:0000062 "fatty-acyl-CoA binding" evidence=ISO]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0003857 "3-hydroxyacyl-CoA
dehydrogenase activity" evidence=ISO] [GO:0003988 "acetyl-CoA
C-acyltransferase activity" evidence=ISO] [GO:0004300 "enoyl-CoA
hydratase activity" evidence=ISO;TAS] [GO:0005739 "mitochondrion"
evidence=ISO;IDA;TAS] [GO:0005743 "mitochondrial inner membrane"
evidence=IDA] [GO:0006629 "lipid metabolic process" evidence=IEA]
[GO:0006631 "fatty acid metabolic process" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=ISO;IMP]
[GO:0008152 "metabolic process" evidence=TAS] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0016507 "mitochondrial
fatty acid beta-oxidation multienzyme complex" evidence=ISO]
[GO:0016508 "long-chain-enoyl-CoA hydratase activity" evidence=ISO]
[GO:0016509 "long-chain-3-hydroxyacyl-CoA dehydrogenase activity"
evidence=ISO;IDA] [GO:0016616 "oxidoreductase activity, acting on
the CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0016829 "lyase activity" evidence=IEA] [GO:0032403 "protein
complex binding" evidence=ISO] [GO:0032868 "response to insulin
stimulus" evidence=IMP] [GO:0042493 "response to drug"
evidence=ISO] [GO:0042645 "mitochondrial nucleoid" evidence=ISO]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0051287 "NAD
binding" evidence=ISO] [GO:0055114 "oxidation-reduction process"
evidence=IDA] InterPro:IPR001753 InterPro:IPR006108
InterPro:IPR006176 InterPro:IPR006180 InterPro:IPR008927
InterPro:IPR012803 InterPro:IPR013328 InterPro:IPR018376
Pfam:PF00378 Pfam:PF00725 Pfam:PF02737 PROSITE:PS00067
PROSITE:PS00166 UniPathway:UPA00659 InterPro:IPR016040
MGI:MGI:2135593 GO:GO:0005730 GO:GO:0005743 Gene3D:3.40.50.720
GO:GO:0051287 GO:GO:0042493 Gene3D:1.10.1040.10 SUPFAM:SSF48179
GO:GO:0032868 GO:GO:0006635 GO:GO:0000062 GO:GO:0042645
eggNOG:COG1250 GO:GO:0003857 GO:GO:0004300 HSSP:P14604
GO:GO:0016508 CTD:3030 HOGENOM:HOG000261346 HOVERGEN:HBG005557
KO:K07515 OMA:SPKRDKG OrthoDB:EOG4FBHSD ChiTaRS:HADHA GO:GO:0016507
GO:GO:0016509 TIGRFAMs:TIGR02441 EMBL:AK029017 EMBL:AK170478
EMBL:AK170683 EMBL:BC027156 EMBL:BC037009 EMBL:BC046978
EMBL:BC058569 IPI:IPI00223092 RefSeq:NP_849209.1 UniGene:Mm.200497
ProteinModelPortal:Q8BMS1 SMR:Q8BMS1 IntAct:Q8BMS1 STRING:Q8BMS1
PhosphoSite:Q8BMS1 REPRODUCTION-2DPAGE:IPI00223092 PaxDb:Q8BMS1
PRIDE:Q8BMS1 Ensembl:ENSMUST00000156859 GeneID:97212 KEGG:mmu:97212
UCSC:uc008wvc.1 GeneTree:ENSGT00700000104363 InParanoid:Q3TCY3
NextBio:352627 Bgee:Q8BMS1 Genevestigator:Q8BMS1 GO:GO:0003988
Uniprot:Q8BMS1
Length = 763
Score = 336 (123.3 bits), Expect = 1.7e-29, P = 1.7e-29
Identities = 69/136 (50%), Positives = 93/136 (68%)
Query: 8 GRKSGKGYFVYAKGSKARPVN---DGALAILKKYSLQPQSALKDEDLQLRMVSRFVNEAV 64
GRKSGKG+++Y +GSK + +N D LA L+ +P+ + DED+Q R+++RFVNEAV
Sbjct: 629 GRKSGKGFYIYQEGSKNKSLNSEMDNILANLR-LPAKPEVS-SDEDVQYRVITRFVNEAV 686
Query: 65 LCLEETILNSPTDGDVGAVXXXXXXXXXXXXXRWVDWYGADKLVQKMLSYENLYGAPFRP 124
LCL+E IL +P +GD+GAV R+VD YGA K+V ++ YE+ YG F P
Sbjct: 687 LCLQEGILATPAEGDIGAVFGLGFPPCLGGPFRFVDLYGAQKVVDRLRKYESAYGTQFTP 746
Query: 125 CQLLLDHAKDSSKKFY 140
CQLLLDHA +SSKKFY
Sbjct: 747 CQLLLDHANNSSKKFY 762
>UNIPROTKB|P40939 [details] [associations]
symbol:HADHA "Trifunctional enzyme subunit alpha,
mitochondrial" species:9606 "Homo sapiens" [GO:0004300 "enoyl-CoA
hydratase activity" evidence=IEA] [GO:0016509
"long-chain-3-hydroxyacyl-CoA dehydrogenase activity" evidence=IEA]
[GO:0000062 "fatty-acyl-CoA binding" evidence=IEA] [GO:0003857
"3-hydroxyacyl-CoA dehydrogenase activity" evidence=IEA]
[GO:0016507 "mitochondrial fatty acid beta-oxidation multienzyme
complex" evidence=IEA] [GO:0016508 "long-chain-enoyl-CoA hydratase
activity" evidence=IEA] [GO:0032403 "protein complex binding"
evidence=IEA] [GO:0032868 "response to insulin stimulus"
evidence=IEA] [GO:0042493 "response to drug" evidence=IEA]
[GO:0051287 "NAD binding" evidence=IEA] [GO:0006635 "fatty acid
beta-oxidation" evidence=IEA;TAS] [GO:0003985 "acetyl-CoA
C-acetyltransferase activity" evidence=TAS] [GO:0005743
"mitochondrial inner membrane" evidence=TAS] [GO:0006644
"phospholipid metabolic process" evidence=TAS] [GO:0035965
"cardiolipin acyl-chain remodeling" evidence=TAS] [GO:0044255
"cellular lipid metabolic process" evidence=TAS] [GO:0044281 "small
molecule metabolic process" evidence=TAS] [GO:0046474
"glycerophospholipid biosynthetic process" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0042645
"mitochondrial nucleoid" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005739
"mitochondrion" evidence=IDA] Reactome:REACT_111217
InterPro:IPR001753 InterPro:IPR006108 InterPro:IPR006176
InterPro:IPR006180 InterPro:IPR008927 InterPro:IPR012803
InterPro:IPR013328 InterPro:IPR018376 Pfam:PF00378 Pfam:PF00725
Pfam:PF02737 PROSITE:PS00067 PROSITE:PS00166 UniPathway:UPA00659
InterPro:IPR016040 EMBL:CH471053 GO:GO:0005730 DrugBank:DB00157
GO:GO:0005743 Gene3D:3.40.50.720 GO:GO:0051287 GO:GO:0042493
Gene3D:1.10.1040.10 SUPFAM:SSF48179 GO:GO:0032868 GO:GO:0006635
GO:GO:0000062 GO:GO:0042645 GO:GO:0035965 eggNOG:COG1250
GO:GO:0003857 GO:GO:0004300 GO:GO:0046474 GO:GO:0003985
GO:GO:0016508 EMBL:D16480 EMBL:U04627 EMBL:AK313027 EMBL:BC009235
IPI:IPI00031522 PIR:JC2108 RefSeq:NP_000173.2 UniGene:Hs.516032
ProteinModelPortal:P40939 SMR:P40939 IntAct:P40939
MINT:MINT-1159893 STRING:P40939 PhosphoSite:P40939 DMDM:20141376
REPRODUCTION-2DPAGE:IPI00031522 UCD-2DPAGE:P40939 PaxDb:P40939
PeptideAtlas:P40939 PRIDE:P40939 DNASU:3030 Ensembl:ENST00000380649
GeneID:3030 KEGG:hsa:3030 UCSC:uc002rgy.3 CTD:3030
GeneCards:GC02M026413 HGNC:HGNC:4801 HPA:HPA015536 MIM:600890
MIM:609015 MIM:609016 neXtProt:NX_P40939 Orphanet:243367 Orphanet:5
Orphanet:746 PharmGKB:PA29175 HOGENOM:HOG000261346
HOVERGEN:HBG005557 InParanoid:P40939 KO:K07515 OMA:SPKRDKG
OrthoDB:EOG4FBHSD PhylomeDB:P40939 SABIO-RK:P40939 ChiTaRS:HADHA
GenomeRNAi:3030 NextBio:11996 ArrayExpress:P40939 Bgee:P40939
CleanEx:HS_HADH CleanEx:HS_HADHA Genevestigator:P40939
GermOnline:ENSG00000084754 GO:GO:0016507 GO:GO:0016509
TIGRFAMs:TIGR02441 Uniprot:P40939
Length = 763
Score = 332 (121.9 bits), Expect = 4.5e-29, P = 4.5e-29
Identities = 65/134 (48%), Positives = 87/134 (64%)
Query: 8 GRKSGKGYFVYAKGSKARPVNDGALAILKKYSLQPQSALK-DEDLQLRMVSRFVNEAVLC 66
GRKSGKG+++Y +G K + +N +IL L P+S + DED+Q R+V+RFVNEAV+C
Sbjct: 629 GRKSGKGFYIYQEGVKRKDLNSDMDSILASLKLPPKSEVSSDEDIQFRLVTRFVNEAVMC 688
Query: 67 LEETILNSPTDGDVGAVXXXXXXXXXXXXXRWVDWYGADKLVQKMLSYENLYGAPFRPCQ 126
L+E IL +P +GD+GAV R+VD YGA K+V ++ YE YG F PCQ
Sbjct: 689 LQEGILATPAEGDIGAVFGLGFPPCLGGPFRFVDLYGAQKIVDRLKKYEAAYGKQFTPCQ 748
Query: 127 LLLDHAKDSSKKFY 140
LL DHA +KKFY
Sbjct: 749 LLADHANSPNKKFY 762
>WB|WBGene00020347 [details] [associations]
symbol:T08B2.7 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0008152
"metabolic process" evidence=IEA] [GO:0003857 "3-hydroxyacyl-CoA
dehydrogenase activity" evidence=IEA] [GO:0006631 "fatty acid
metabolic process" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0004300 "enoyl-CoA hydratase activity"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0006635
"fatty acid beta-oxidation" evidence=IEA] [GO:0016507
"mitochondrial fatty acid beta-oxidation multienzyme complex"
evidence=IEA] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0019915 "lipid
storage" evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] InterPro:IPR001753 InterPro:IPR006108
InterPro:IPR006176 InterPro:IPR008927 InterPro:IPR012803
InterPro:IPR013328 Pfam:PF00378 Pfam:PF00725 Pfam:PF02737
InterPro:IPR016040 GO:GO:0009792 GO:GO:0006898 GO:GO:0040007
GO:GO:0002119 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
Gene3D:1.10.1040.10 SUPFAM:SSF48179 GO:GO:0006635 GO:GO:0019915
HSSP:P00348 GO:GO:0003857 GO:GO:0004300 HOGENOM:HOG000261346
KO:K07515 OMA:SPKRDKG GO:GO:0016507 TIGRFAMs:TIGR02441
GeneTree:ENSGT00700000104363 EMBL:FO080899 GeneID:172310
KEGG:cel:CELE_T08B2.7 UCSC:T08B2.7c CTD:172310 NextBio:874953
PIR:T28750 RefSeq:NP_491789.1 ProteinModelPortal:Q9GYT0 SMR:Q9GYT0
STRING:Q9GYT0 PRIDE:Q9GYT0 EnsemblMetazoa:T08B2.7a
WormBase:T08B2.7a InParanoid:Q9GYT0 ArrayExpress:Q9GYT0
Uniprot:Q9GYT0
Length = 781
Score = 332 (121.9 bits), Expect = 4.8e-29, P = 4.8e-29
Identities = 72/136 (52%), Positives = 90/136 (66%)
Query: 8 GRKSGKGYFVYAKGSK-ARPVNDGALAILKKYSLQPQSALKD-EDLQLRMVSRFVNEAVL 65
GRK+GKG FVY G K ++ VND A +L+KY L P +++ ED Q+R+VSRFVNEA+L
Sbjct: 646 GRKTGKGIFVYGDGKKGSKKVNDEATKLLQKYKLTPNASVSSPEDRQIRLVSRFVNEALL 705
Query: 66 CLEETILNSPTDGDVGAVXXXXXXXXXXXXXRWVDWYGADKLVQKMLSYENLYGA-PFRP 124
CLEE +L SP+DGD+ +V R+VD YGADKLV+ M + Y A F P
Sbjct: 706 CLEEGVLASPSDGDIASVFGVGFPPFWGGPFRFVDLYGADKLVKSMEKFAGAYEAVQFEP 765
Query: 125 CQLLLDHAKDSSKKFY 140
CQLL DHAK S KKFY
Sbjct: 766 CQLLKDHAK-SGKKFY 780
>UNIPROTKB|Q29554 [details] [associations]
symbol:HADHA "Trifunctional enzyme subunit alpha,
mitochondrial" species:9823 "Sus scrofa" [GO:0006635 "fatty acid
beta-oxidation" evidence=IEA] [GO:0042645 "mitochondrial nucleoid"
evidence=IEA] [GO:0032868 "response to insulin stimulus"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0016509
"long-chain-3-hydroxyacyl-CoA dehydrogenase activity" evidence=IEA]
[GO:0004300 "enoyl-CoA hydratase activity" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0016507
"mitochondrial fatty acid beta-oxidation multienzyme complex"
evidence=IEA] [GO:0003857 "3-hydroxyacyl-CoA dehydrogenase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001753 InterPro:IPR006108
InterPro:IPR006176 InterPro:IPR006180 InterPro:IPR008927
InterPro:IPR012803 InterPro:IPR013328 InterPro:IPR018376
Pfam:PF00378 Pfam:PF00725 Pfam:PF02737 PROSITE:PS00067
PROSITE:PS00166 UniPathway:UPA00659 InterPro:IPR016040
GO:GO:0005730 GO:GO:0005743 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 Gene3D:1.10.1040.10 SUPFAM:SSF48179 GO:GO:0032868
GO:GO:0006635 GO:GO:0042645 eggNOG:COG1250 GO:GO:0003857
GO:GO:0004300 CTD:3030 HOGENOM:HOG000261346 HOVERGEN:HBG005557
KO:K07515 OMA:SPKRDKG OrthoDB:EOG4FBHSD GO:GO:0016507 GO:GO:0016509
TIGRFAMs:TIGR02441 GeneTree:ENSGT00700000104363 EMBL:L12581
EMBL:AF028609 PIR:PN0511 RefSeq:NP_999127.1 UniGene:Ssc.11580
ProteinModelPortal:Q29554 IntAct:Q29554 STRING:Q29554 PRIDE:Q29554
Ensembl:ENSSSCT00000009377 GeneID:397012 KEGG:ssc:397012
Uniprot:Q29554
Length = 763
Score = 326 (119.8 bits), Expect = 2.0e-28, P = 2.0e-28
Identities = 65/134 (48%), Positives = 87/134 (64%)
Query: 8 GRKSGKGYFVYAKGSKARPVNDGALAILKKYSLQPQSALK-DEDLQLRMVSRFVNEAVLC 66
GRKSGKG++VY +G K R VN +IL + + + DED+Q R+V+RFVNEAVLC
Sbjct: 629 GRKSGKGFYVYQEGVKNRNVNSDTESILASLKIPSRPDISSDEDIQYRLVTRFVNEAVLC 688
Query: 67 LEETILNSPTDGDVGAVXXXXXXXXXXXXXRWVDWYGADKLVQKMLSYENLYGAPFRPCQ 126
L+E IL +P +GD+GAV R+VD YGA K+V ++ YE +YG F PCQ
Sbjct: 689 LQEGILATPAEGDIGAVFGLGFPPCLGGPFRFVDLYGAQKVVDRLRKYEAIYGKQFTPCQ 748
Query: 127 LLLDHAKDSSKKFY 140
LL+DHA +KKF+
Sbjct: 749 LLIDHASSPNKKFF 762
>UNIPROTKB|Q3SZ00 [details] [associations]
symbol:HADHA "HADHA protein" species:9913 "Bos taurus"
[GO:0042645 "mitochondrial nucleoid" evidence=IEA] [GO:0032868
"response to insulin stimulus" evidence=IEA] [GO:0016509
"long-chain-3-hydroxyacyl-CoA dehydrogenase activity" evidence=IEA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0016507 "mitochondrial fatty acid
beta-oxidation multienzyme complex" evidence=IEA] [GO:0006635
"fatty acid beta-oxidation" evidence=IEA] [GO:0004300 "enoyl-CoA
hydratase activity" evidence=IEA] [GO:0003857 "3-hydroxyacyl-CoA
dehydrogenase activity" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001753 InterPro:IPR006108
InterPro:IPR006176 InterPro:IPR006180 InterPro:IPR008927
InterPro:IPR012803 InterPro:IPR013328 InterPro:IPR018376
Pfam:PF00378 Pfam:PF00725 Pfam:PF02737 PROSITE:PS00067
PROSITE:PS00166 InterPro:IPR016040 GO:GO:0005730 GO:GO:0005743
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 Gene3D:1.10.1040.10
SUPFAM:SSF48179 GO:GO:0032868 GO:GO:0006635 GO:GO:0042645
GO:GO:0003857 GO:GO:0004300 HOVERGEN:HBG005557 OMA:SPKRDKG
GO:GO:0016507 GO:GO:0016509 TIGRFAMs:TIGR02441
GeneTree:ENSGT00700000104363 EMBL:DAAA02031607 EMBL:DAAA02031608
EMBL:BC103307 IPI:IPI00702650 UniGene:Bt.48598 IntAct:Q3SZ00
STRING:Q3SZ00 Ensembl:ENSBTAT00000020020 InParanoid:Q3SZ00
Uniprot:Q3SZ00
Length = 763
Score = 325 (119.5 bits), Expect = 2.6e-28, P = 2.6e-28
Identities = 67/136 (49%), Positives = 90/136 (66%)
Query: 8 GRKSGKGYFVYAKGSKARPVN---DGALAILKKYSLQPQSALKDEDLQLRMVSRFVNEAV 64
GRKSGKG+++Y +G K + +N D LA LK S QP + DED+Q R+V+RFVNEA+
Sbjct: 629 GRKSGKGFYIYQEGVKNKNLNSDMDSILASLKMPS-QPDVS-SDEDIQYRLVTRFVNEAI 686
Query: 65 LCLEETILNSPTDGDVGAVXXXXXXXXXXXXXRWVDWYGADKLVQKMLSYENLYGAPFRP 124
LCL+E +L +PT+GD+GAV +VD YGA K+V ++ YE YG F P
Sbjct: 687 LCLQEGVLATPTEGDIGAVFGLGFPPCLGGPFHFVDLYGAQKIVDRLRKYEAAYGKQFTP 746
Query: 125 CQLLLDHAKDSSKKFY 140
CQLL+DHA + +KKFY
Sbjct: 747 CQLLVDHANNPNKKFY 762
>UNIPROTKB|F1PIP0 [details] [associations]
symbol:HADHA "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0016507 "mitochondrial fatty acid beta-oxidation multienzyme
complex" evidence=IEA] [GO:0006635 "fatty acid beta-oxidation"
evidence=IEA] [GO:0004300 "enoyl-CoA hydratase activity"
evidence=IEA] [GO:0003857 "3-hydroxyacyl-CoA dehydrogenase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001753 InterPro:IPR006108
InterPro:IPR006176 InterPro:IPR006180 InterPro:IPR008927
InterPro:IPR012803 InterPro:IPR013328 InterPro:IPR018376
Pfam:PF00378 Pfam:PF00725 Pfam:PF02737 PROSITE:PS00067
PROSITE:PS00166 InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 Gene3D:1.10.1040.10 SUPFAM:SSF48179 GO:GO:0006635
GO:GO:0003857 GO:GO:0004300 OMA:SPKRDKG GO:GO:0016507
TIGRFAMs:TIGR02441 GeneTree:ENSGT00700000104363 EMBL:AAEX03010792
Ensembl:ENSCAFT00000006890 Uniprot:F1PIP0
Length = 747
Score = 323 (118.8 bits), Expect = 4.0e-28, P = 4.0e-28
Identities = 65/134 (48%), Positives = 88/134 (65%)
Query: 8 GRKSGKGYFVYAKGSKARPVNDGALAILKKYSLQPQSALK-DEDLQLRMVSRFVNEAVLC 66
GRKSGKG+++Y +G K + VN IL + P+ + DED+Q R+V+RFVNEAVLC
Sbjct: 614 GRKSGKGFYIYQEGVKTKNVNSDMDGILASLKVPPKYGVSSDEDIQYRLVTRFVNEAVLC 673
Query: 67 LEETILNSPTDGDVGAVXXXXXXXXXXXXXRWVDWYGADKLVQKMLSYENLYGAPFRPCQ 126
L+E IL +PT+GD+GAV R+VD YGA K+V ++ +E YG F PCQ
Sbjct: 674 LQEGILATPTEGDIGAVFGLGFPPCLGGPFRFVDLYGAQKIVDRLRKFEAAYGKQFTPCQ 733
Query: 127 LLLDHAKDSSKKFY 140
LL+DHA +S+ KFY
Sbjct: 734 LLIDHA-NSANKFY 746
>RGD|620512 [details] [associations]
symbol:Hadha "hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA
thiolase/enoyl-CoA hydratase (trifunctional protein), alpha
subunit" species:10116 "Rattus norvegicus" [GO:0000062
"fatty-acyl-CoA binding" evidence=IDA] [GO:0003857
"3-hydroxyacyl-CoA dehydrogenase activity" evidence=IMP;IDA]
[GO:0003988 "acetyl-CoA C-acyltransferase activity" evidence=IDA]
[GO:0004300 "enoyl-CoA hydratase activity" evidence=IMP;IDA]
[GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005739 "mitochondrion" evidence=ISO;IDA;TAS]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA;ISO]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA;ISO;IDA]
[GO:0016507 "mitochondrial fatty acid beta-oxidation multienzyme
complex" evidence=IDA;TAS] [GO:0016508 "long-chain-enoyl-CoA
hydratase activity" evidence=IDA] [GO:0016509
"long-chain-3-hydroxyacyl-CoA dehydrogenase activity"
evidence=ISO;IDA] [GO:0032403 "protein complex binding"
evidence=IMP] [GO:0032868 "response to insulin stimulus"
evidence=IEA;ISO] [GO:0042493 "response to drug" evidence=IDA]
[GO:0042645 "mitochondrial nucleoid" evidence=IEA;ISO] [GO:0051287
"NAD binding" evidence=IDA] [GO:0055114 "oxidation-reduction
process" evidence=ISO] InterPro:IPR001753 InterPro:IPR006108
InterPro:IPR006176 InterPro:IPR006180 InterPro:IPR008927
InterPro:IPR012803 InterPro:IPR013328 InterPro:IPR018376
Pfam:PF00378 Pfam:PF00725 Pfam:PF02737 PROSITE:PS00067
PROSITE:PS00166 UniPathway:UPA00659 InterPro:IPR016040 RGD:620512
GO:GO:0005730 GO:GO:0032403 GO:GO:0005743 Gene3D:3.40.50.720
GO:GO:0051287 GO:GO:0042493 Gene3D:1.10.1040.10 SUPFAM:SSF48179
GO:GO:0032868 GO:GO:0006635 GO:GO:0000062 GO:GO:0042645
GO:GO:0003857 GO:GO:0004300 eggNOG:COG1024 HOGENOM:HOG000027939
GO:GO:0016508 CTD:3030 HOVERGEN:HBG005557 KO:K07515
OrthoDB:EOG4FBHSD GO:GO:0016507 GO:GO:0016509 TIGRFAMs:TIGR02441
GO:GO:0003988 EMBL:D16478 EMBL:BC091697 IPI:IPI00212622 PIR:A49681
RefSeq:NP_570839.2 UniGene:Rn.3340 UniGene:Rn.34751
ProteinModelPortal:Q64428 IntAct:Q64428 MINT:MINT-4599643
STRING:Q64428 PhosphoSite:Q64428 PRIDE:Q64428 GeneID:170670
KEGG:rno:170670 UCSC:RGD:620512 InParanoid:Q5BIZ5 BRENDA:1.1.1.211
NextBio:621163 ArrayExpress:Q64428 Genevestigator:Q64428
GermOnline:ENSRNOG00000024629 Uniprot:Q64428
Length = 763
Score = 314 (115.6 bits), Expect = 4.0e-27, P = 4.0e-27
Identities = 65/134 (48%), Positives = 86/134 (64%)
Query: 8 GRKSGKGYFVYAKGSKARPVNDGALAILKKYSLQPQSALK-DEDLQLRMVSRFVNEAVLC 66
GRKSGKG+++Y GSK + +N IL L + + DED+Q R+++RFVNEAVLC
Sbjct: 629 GRKSGKGFYIYQSGSKNKNLNSEIDNILVNLRLPAKPEVSSDEDIQYRVITRFVNEAVLC 688
Query: 67 LEETILNSPTDGDVGAVXXXXXXXXXXXXXRWVDWYGADKLVQKMLSYENLYGAPFRPCQ 126
L+E IL +P +GD+GAV R+VD YGA K+V ++ YE+ YG F PCQ
Sbjct: 689 LQEGILATPEEGDIGAVFGLGFPPCLGGPFRFVDLYGAQKVVDRLRKYESAYGTQFTPCQ 748
Query: 127 LLLDHAKDSSKKFY 140
LL D A +SSKKFY
Sbjct: 749 LLRDLANNSSKKFY 762
>WB|WBGene00001150 [details] [associations]
symbol:ech-1 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0008152
"metabolic process" evidence=IEA] [GO:0003857 "3-hydroxyacyl-CoA
dehydrogenase activity" evidence=IEA] [GO:0006631 "fatty acid
metabolic process" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0004300 "enoyl-CoA hydratase activity"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0006635
"fatty acid beta-oxidation" evidence=IEA] [GO:0016507
"mitochondrial fatty acid beta-oxidation multienzyme complex"
evidence=IEA] InterPro:IPR001753 InterPro:IPR006108
InterPro:IPR006176 InterPro:IPR008927 InterPro:IPR012803
InterPro:IPR013328 Pfam:PF00378 Pfam:PF00725 Pfam:PF02737
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
Gene3D:1.10.1040.10 SUPFAM:SSF48179 GO:GO:0006635 HSSP:P00348
eggNOG:COG1250 GO:GO:0003857 GO:GO:0004300 HOGENOM:HOG000261346
KO:K07515 GO:GO:0016507 TIGRFAMs:TIGR02441
GeneTree:ENSGT00700000104363 EMBL:Z81043 PIR:T19558
RefSeq:NP_506810.1 ProteinModelPortal:O17612 SMR:O17612
STRING:O17612 PaxDb:O17612 EnsemblMetazoa:C29F3.1 GeneID:180037
KEGG:cel:CELE_C29F3.1 UCSC:C29F3.1 CTD:180037 WormBase:C29F3.1
InParanoid:O17612 OMA:RWEQDET NextBio:907840 Uniprot:O17612
Length = 755
Score = 291 (107.5 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 65/136 (47%), Positives = 85/136 (62%)
Query: 8 GRKSGKGYFVYAKGSK-ARPVNDGALAILKKYSLQP-QSALKDEDLQLRMVSRFVNEAVL 65
GRK+ KG FVY G+K ++ VN A + +KY L P +S ED QLR+VSRFVNEA+L
Sbjct: 620 GRKTSKGIFVYGDGAKGSKKVNQEAAKLFEKYKLTPIKSVSSPEDRQLRLVSRFVNEALL 679
Query: 66 CLEETILNSPTDGDVGAVXXXXXXXXXXXXXRWVDWYGADKLVQKMLSYENLY-GAPFRP 124
CLEE +++SP+DGD+ +V R+VD YGA KLV M + +Y F P
Sbjct: 680 CLEEGVISSPSDGDIASVFGLGFPPFWGGPFRFVDLYGAGKLVAAMDRFAGVYESVQFEP 739
Query: 125 CQLLLDHAKDSSKKFY 140
CQLL +HAK S +FY
Sbjct: 740 CQLLRNHAK-SGGQFY 754
>UNIPROTKB|H0YFD6 [details] [associations]
symbol:HADHA "Trifunctional enzyme subunit alpha,
mitochondrial" species:9606 "Homo sapiens" [GO:0003857
"3-hydroxyacyl-CoA dehydrogenase activity" evidence=IEA]
[GO:0006631 "fatty acid metabolic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] InterPro:IPR006108
InterPro:IPR006180 InterPro:IPR008927 InterPro:IPR013328
Pfam:PF00725 PROSITE:PS00067 GO:GO:0050662 Gene3D:1.10.1040.10
SUPFAM:SSF48179 GO:GO:0006631 GO:GO:0003857 EMBL:AC010896
HGNC:HGNC:4801 ChiTaRS:HADHA EMBL:AC011742 Ensembl:ENST00000492433
Bgee:H0YFD6 Uniprot:H0YFD6
Length = 250
Score = 211 (79.3 bits), Expect = 1.4e-20, Sum P(2) = 1.4e-20
Identities = 40/77 (51%), Positives = 57/77 (74%)
Query: 8 GRKSGKGYFVYAKGSKARPVNDGALAILKKYSLQPQSALK-DEDLQLRMVSRFVNEAVLC 66
GRKSGKG+++Y +G K + +N +IL L P+S + DED+Q R+V+RFVNEAV+C
Sbjct: 115 GRKSGKGFYIYQEGVKRKDLNSDMDSILASLKLPPKSEVSSDEDIQFRLVTRFVNEAVMC 174
Query: 67 LEETILNSPTDGDVGAV 83
L+E IL +P +GD+GAV
Sbjct: 175 LQEGILATPAEGDIGAV 191
Score = 46 (21.3 bits), Expect = 1.4e-20, Sum P(2) = 1.4e-20
Identities = 8/15 (53%), Positives = 12/15 (80%)
Query: 97 RWVDWYGADKLVQKM 111
R+VD YGA K+V ++
Sbjct: 234 RFVDLYGAQKIVDRL 248
>UNIPROTKB|Q9KT58 [details] [associations]
symbol:fadJ "Fatty acid oxidation complex subunit alpha"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0003857 "3-hydroxyacyl-CoA dehydrogenase activity"
evidence=ISS] [GO:0004300 "enoyl-CoA hydratase activity"
evidence=ISS] [GO:0008692 "3-hydroxybutyryl-CoA epimerase activity"
evidence=ISS] [GO:0009062 "fatty acid catabolic process"
evidence=ISS] HAMAP:MF_01617 InterPro:IPR001753 InterPro:IPR006108
InterPro:IPR006176 InterPro:IPR006180 InterPro:IPR008927
InterPro:IPR012802 InterPro:IPR013328 InterPro:IPR018376
Pfam:PF00378 Pfam:PF00725 Pfam:PF02737 PROSITE:PS00067
PROSITE:PS00166 UniPathway:UPA00659 InterPro:IPR016040
Gene3D:3.40.50.720 GO:GO:0051287 Gene3D:1.10.1040.10
SUPFAM:SSF48179 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0006635 eggNOG:COG1250 GO:GO:0003857 GO:GO:0008692
GO:GO:0004300 GO:GO:0009062 OMA:SPKRDKG GO:GO:0016507 KO:K01782
ProtClustDB:PRK11154 TIGRFAMs:TIGR02440 PIR:F82248
RefSeq:NP_230692.2 ProteinModelPortal:Q9KT58 DNASU:2614317
GeneID:2614317 KEGG:vch:VC1047 PATRIC:20081192 Uniprot:Q9KT58
Length = 708
Score = 232 (86.7 bits), Expect = 2.3e-18, P = 2.3e-18
Identities = 53/134 (39%), Positives = 75/134 (55%)
Query: 8 GRKSGKGYFVYAKGSKARPVNDGALAILKKYSLQPQSALKDEDLQLRMVSRFVNEAVLCL 67
GRKSGKG++ Y KGSK + V+ +LK L P+S L D+++ +R + +NEAV CL
Sbjct: 580 GRKSGKGFYTY-KGSKKKEVDKSVYKLLK---LTPESKLNDKEIAMRCLLPMLNEAVRCL 635
Query: 68 EETILNSPTDGDVGAVXXXXXXXXXXXXXRWVDWYGADKLVQKMLSYENLYGAPFRPCQL 127
+E I+ S DGD+GA+ R++D G K+V+ M + YG F PC
Sbjct: 636 DEGIIRSARDGDMGAIFGIGFPPFLGGPFRYMDTLGLTKVVEMMNQHTEKYGERFAPCDG 695
Query: 128 LLDHAKDSSKKFYP 141
LL A +KFYP
Sbjct: 696 LLTRA-GLGEKFYP 708
>TIGR_CMR|VC_1047 [details] [associations]
symbol:VC_1047 "fatty oxidation complex, alpha subunit"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0003857
"3-hydroxyacyl-CoA dehydrogenase activity" evidence=ISS]
[GO:0004300 "enoyl-CoA hydratase activity" evidence=ISS]
[GO:0008692 "3-hydroxybutyryl-CoA epimerase activity" evidence=ISS]
[GO:0009062 "fatty acid catabolic process" evidence=ISS]
HAMAP:MF_01617 InterPro:IPR001753 InterPro:IPR006108
InterPro:IPR006176 InterPro:IPR006180 InterPro:IPR008927
InterPro:IPR012802 InterPro:IPR013328 InterPro:IPR018376
Pfam:PF00378 Pfam:PF00725 Pfam:PF02737 PROSITE:PS00067
PROSITE:PS00166 UniPathway:UPA00659 InterPro:IPR016040
Gene3D:3.40.50.720 GO:GO:0051287 Gene3D:1.10.1040.10
SUPFAM:SSF48179 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0006635 eggNOG:COG1250 GO:GO:0003857 GO:GO:0008692
GO:GO:0004300 GO:GO:0009062 OMA:SPKRDKG GO:GO:0016507 KO:K01782
ProtClustDB:PRK11154 TIGRFAMs:TIGR02440 PIR:F82248
RefSeq:NP_230692.2 ProteinModelPortal:Q9KT58 DNASU:2614317
GeneID:2614317 KEGG:vch:VC1047 PATRIC:20081192 Uniprot:Q9KT58
Length = 708
Score = 232 (86.7 bits), Expect = 2.3e-18, P = 2.3e-18
Identities = 53/134 (39%), Positives = 75/134 (55%)
Query: 8 GRKSGKGYFVYAKGSKARPVNDGALAILKKYSLQPQSALKDEDLQLRMVSRFVNEAVLCL 67
GRKSGKG++ Y KGSK + V+ +LK L P+S L D+++ +R + +NEAV CL
Sbjct: 580 GRKSGKGFYTY-KGSKKKEVDKSVYKLLK---LTPESKLNDKEIAMRCLLPMLNEAVRCL 635
Query: 68 EETILNSPTDGDVGAVXXXXXXXXXXXXXRWVDWYGADKLVQKMLSYENLYGAPFRPCQL 127
+E I+ S DGD+GA+ R++D G K+V+ M + YG F PC
Sbjct: 636 DEGIIRSARDGDMGAIFGIGFPPFLGGPFRYMDTLGLTKVVEMMNQHTEKYGERFAPCDG 695
Query: 128 LLDHAKDSSKKFYP 141
LL A +KFYP
Sbjct: 696 LLTRA-GLGEKFYP 708
>TIGR_CMR|SO_3088 [details] [associations]
symbol:SO_3088 "fatty oxidation complex, alpha subunit"
species:211586 "Shewanella oneidensis MR-1" [GO:0003857
"3-hydroxyacyl-CoA dehydrogenase activity" evidence=ISS]
[GO:0004300 "enoyl-CoA hydratase activity" evidence=ISS]
[GO:0008692 "3-hydroxybutyryl-CoA epimerase activity" evidence=ISS]
[GO:0009062 "fatty acid catabolic process" evidence=ISS]
HAMAP:MF_01617 InterPro:IPR001753 InterPro:IPR006108
InterPro:IPR006176 InterPro:IPR008927 InterPro:IPR012802
InterPro:IPR013328 Pfam:PF00378 Pfam:PF00725 Pfam:PF02737
PROSITE:PS00067 PROSITE:PS00166 UniPathway:UPA00659
InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0051287
Gene3D:1.10.1040.10 SUPFAM:SSF48179 GO:GO:0006635 EMBL:AE014299
GenomeReviews:AE014299_GR eggNOG:COG1250 GO:GO:0003857
GO:GO:0008692 GO:GO:0004300 HOGENOM:HOG000261346 OMA:SPKRDKG
GO:GO:0016507 KO:K01782 ProtClustDB:PRK11154 TIGRFAMs:TIGR02440
RefSeq:NP_718651.2 ProteinModelPortal:Q8ECP7 GeneID:1170773
KEGG:son:SO_3088 PATRIC:23525814 Uniprot:Q8ECP7
Length = 707
Score = 193 (73.0 bits), Expect = 3.5e-14, P = 3.5e-14
Identities = 44/132 (33%), Positives = 69/132 (52%)
Query: 8 GRKSGKGYFVYAKGSKARPVNDGALAILKKYSLQPQSALKDEDLQLRMVSRFVNEAVLCL 67
GRK+GKG++ Y SK + V++ +L ++P + + R V + +NEAV CL
Sbjct: 579 GRKNGKGFYQYGAASKKKAVDETVYGVL---GIKPGVDKEMSAVAERCVVQMLNEAVRCL 635
Query: 68 EETILNSPTDGDVGAVXXXXXXXXXXXXXRWVDWYGADKLVQKMLSYENLYGAPFRPCQL 127
+ I+ SP DGD+GA+ ++D GAD LV+ + Y+ YG F PCQ
Sbjct: 636 DAGIIASPRDGDIGAIFGIGFPPFLGGPFHYIDTLGADNLVKILERYQTQYGDRFEPCQR 695
Query: 128 LLDHAKDSSKKF 139
L A + ++ F
Sbjct: 696 LKAMAAEKARFF 707
>UNIPROTKB|P77399 [details] [associations]
symbol:fadJ "FadJ monomer" species:83333 "Escherichia coli
K-12" [GO:0051287 "NAD binding" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0016616 "oxidoreductase activity, acting
on the CH-OH group of donors, NAD or NADP as acceptor"
evidence=IEA] [GO:0016507 "mitochondrial fatty acid beta-oxidation
multienzyme complex" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006635 "fatty acid beta-oxidation" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0016853
"isomerase activity" evidence=IEA] [GO:0016829 "lyase activity"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0008152
"metabolic process" evidence=IEA] [GO:0006631 "fatty acid metabolic
process" evidence=IEA] [GO:0006629 "lipid metabolic process"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0003857 "3-hydroxyacyl-CoA
dehydrogenase activity" evidence=IEA] [GO:0004300 "enoyl-CoA
hydratase activity" evidence=IEA] [GO:0008692 "3-hydroxybutyryl-CoA
epimerase activity" evidence=IEA] HAMAP:MF_01617 InterPro:IPR001753
InterPro:IPR006108 InterPro:IPR006176 InterPro:IPR006180
InterPro:IPR008927 InterPro:IPR012802 InterPro:IPR013328
Pfam:PF00378 Pfam:PF00725 Pfam:PF02737 PROSITE:PS00067
PROSITE:PS00166 UniPathway:UPA00659 InterPro:IPR016040
Gene3D:3.40.50.720 GO:GO:0051287 Gene3D:1.10.1040.10
SUPFAM:SSF48179 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006635 eggNOG:COG1250 GO:GO:0003857
GO:GO:0008692 GO:GO:0004300 HOGENOM:HOG000261346 OMA:SPKRDKG
GO:GO:0016507 PIR:C65007 RefSeq:NP_416843.1 RefSeq:YP_490583.1
ProteinModelPortal:P77399 SMR:P77399 DIP:DIP-11990N IntAct:P77399
EnsemblBacteria:EBESCT00000002370 EnsemblBacteria:EBESCT00000018052
GeneID:12931539 GeneID:949097 KEGG:ecj:Y75_p2307 KEGG:eco:b2341
PATRIC:32120055 EchoBASE:EB3879 EcoGene:EG14127 KO:K01782
ProtClustDB:PRK11154 BioCyc:EcoCyc:G7212-MONOMER
BioCyc:ECOL316407:JW2338-MONOMER BioCyc:MetaCyc:G7212-MONOMER
Genevestigator:P77399 TIGRFAMs:TIGR02440 Uniprot:P77399
Length = 714
Score = 172 (65.6 bits), Expect = 6.3e-12, P = 6.3e-12
Identities = 41/124 (33%), Positives = 65/124 (52%)
Query: 8 GRKSGKGYFVYA-KGSKARPVNDGALAILKKYSLQPQSALKDEDLQLRMVSRFVNEAVLC 66
GRK+G+G+++Y KG K++ D A+ L Q Q + + R V +NEAV C
Sbjct: 576 GRKNGRGFYLYGQKGRKSKKQVDPAIYPL--IGTQGQGRISAPQVAERCVMLMLNEAVRC 633
Query: 67 LEETILNSPTDGDVGAVXXXXXXXXXXXXXRWVDWYGADKLVQKMLSYENLYGAPFRPCQ 126
++E ++ S DGD+GAV R++D GA ++V M YG+ F PC+
Sbjct: 634 VDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCE 693
Query: 127 LLLD 130
L++
Sbjct: 694 RLVE 697
>UNIPROTKB|P21177 [details] [associations]
symbol:fadB "dodecenoyl-CoA delta-isomerase, enoyl-CoA
hydratase, 3-hydroxybutyryl-CoA epimerase, 3-hydroxyacyl-CoA
dehydrogenase" species:83333 "Escherichia coli K-12" [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0016507 "mitochondrial fatty acid
beta-oxidation multienzyme complex" evidence=IEA] [GO:0009062
"fatty acid catabolic process" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006635 "fatty acid
beta-oxidation" evidence=IEA] [GO:0055114 "oxidation-reduction
process" evidence=IEA] [GO:0016853 "isomerase activity"
evidence=IEA] [GO:0016829 "lyase activity" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0016042
"lipid catabolic process" evidence=IEA] [GO:0008152 "metabolic
process" evidence=IEA] [GO:0006631 "fatty acid metabolic process"
evidence=IEA] [GO:0006629 "lipid metabolic process" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0003857
"3-hydroxyacyl-CoA dehydrogenase activity" evidence=IEA]
[GO:0004300 "enoyl-CoA hydratase activity" evidence=IEA]
[GO:0008692 "3-hydroxybutyryl-CoA epimerase activity" evidence=IEA]
[GO:0004165 "dodecenoyl-CoA delta-isomerase activity" evidence=IEA]
HAMAP:MF_01621 InterPro:IPR001753 InterPro:IPR006108
InterPro:IPR006176 InterPro:IPR006180 InterPro:IPR008927
InterPro:IPR012799 InterPro:IPR013328 InterPro:IPR018376
Pfam:PF00378 Pfam:PF00725 Pfam:PF02737 PROSITE:PS00067
PROSITE:PS00166 UniPathway:UPA00659 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 Gene3D:1.10.1040.10
SUPFAM:SSF48179 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006635 eggNOG:COG1250 GO:GO:0003857
GO:GO:0008692 GO:GO:0004165 GO:GO:0004300 EMBL:M87049 GO:GO:0016507
EMBL:M59368 EMBL:M74164 EMBL:X52837 HOGENOM:HOG000261344 KO:K01825
ProtClustDB:PRK11730 TIGRFAMs:TIGR02437 PIR:A39592
RefSeq:NP_418288.1 RefSeq:YP_491598.1 ProteinModelPortal:P21177
SMR:P21177 DIP:DIP-9560N IntAct:P21177 PRIDE:P21177
EnsemblBacteria:EBESCT00000003584 EnsemblBacteria:EBESCT00000014339
GeneID:12934454 GeneID:948336 KEGG:ecj:Y75_p3334 KEGG:eco:b3846
PATRIC:32123189 EchoBASE:EB0275 EcoGene:EG10279 OMA:NDQFVKG
BioCyc:EcoCyc:FADB-MONOMER BioCyc:ECOL316407:JW3822-MONOMER
BioCyc:MetaCyc:FADB-MONOMER Genevestigator:P21177 Uniprot:P21177
Length = 729
Score = 154 (59.3 bits), Expect = 5.5e-10, P = 5.5e-10
Identities = 40/136 (29%), Positives = 68/136 (50%)
Query: 8 GRKSGKGYFVYAKGSKARPVN--DGALAILKKYSLQPQSALKDEDLQLRMVSRFVNEAVL 65
G+K+G G++ Y + SK +P D A+ L QP+ +E++ RM+ VNE V
Sbjct: 582 GQKNGLGFWRYKEDSKGKPKKEEDAAVEDLLAEVSQPKRDFSEEEIIARMMIPMVNEVVR 641
Query: 66 CLEETILNSPTDGDVGAVXXXXXXXXXXXXXRWVDWYGADKLVQKMLSYENLYGAPFRPC 125
CLEE I+ +P + D+ V RW+D G+ K + Y++L G +
Sbjct: 642 CLEEGIIATPAEADMALVYGLGFPPFHGGAFRWLDTLGSAKYLDMAQQYQHL-GPLYEVP 700
Query: 126 QLLLDHAKDSSKKFYP 141
+ L + A+ + + +YP
Sbjct: 701 EGLRNKARHN-EPYYP 715
>UNIPROTKB|F1NI29 [details] [associations]
symbol:HADHA "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003857 "3-hydroxyacyl-CoA dehydrogenase activity"
evidence=IEA] [GO:0004300 "enoyl-CoA hydratase activity"
evidence=IEA] [GO:0006635 "fatty acid beta-oxidation" evidence=IEA]
[GO:0016507 "mitochondrial fatty acid beta-oxidation multienzyme
complex" evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005743 "mitochondrial inner
membrane" evidence=IEA] [GO:0016509 "long-chain-3-hydroxyacyl-CoA
dehydrogenase activity" evidence=IEA] [GO:0032868 "response to
insulin stimulus" evidence=IEA] [GO:0042645 "mitochondrial
nucleoid" evidence=IEA] InterPro:IPR001753 InterPro:IPR006108
InterPro:IPR006176 InterPro:IPR006180 InterPro:IPR008927
InterPro:IPR012803 InterPro:IPR013328 InterPro:IPR018376
Pfam:PF00378 Pfam:PF00725 Pfam:PF02737 PROSITE:PS00067
PROSITE:PS00166 InterPro:IPR016040 GO:GO:0005730 GO:GO:0005743
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 Gene3D:1.10.1040.10
SUPFAM:SSF48179 GO:GO:0032868 GO:GO:0006635 GO:GO:0042645
GO:GO:0003857 GO:GO:0004300 OMA:SPKRDKG GO:GO:0016507 GO:GO:0016509
TIGRFAMs:TIGR02441 GeneTree:ENSGT00700000104363 EMBL:AADN02018418
EMBL:AADN02018431 EMBL:AADN02018419 EMBL:AADN02018420
EMBL:AADN02018421 EMBL:AADN02018422 EMBL:AADN02018423
EMBL:AADN02018424 EMBL:AADN02018425 EMBL:AADN02018426
EMBL:AADN02018427 EMBL:AADN02018428 EMBL:AADN02018429
EMBL:AADN02018430 IPI:IPI00573987 Ensembl:ENSGALT00000026684
Uniprot:F1NI29
Length = 697
Score = 149 (57.5 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 28/62 (45%), Positives = 44/62 (70%)
Query: 8 GRKSGKGYFVYAKGSKARPVNDGALAILKKYSLQPQSAL-KDEDLQLRMVSRFVNEAVLC 66
GRK+GKG+++Y +G K R +N G IL ++ L + + DED+Q+R+V+RF NEA +C
Sbjct: 636 GRKAGKGFYIYQEGVKNRSLNSGMDEILAQFKLPAKPEVCTDEDIQMRLVTRFGNEAAMC 695
Query: 67 LE 68
L+
Sbjct: 696 LQ 697
>UNIPROTKB|Q8W1L6 [details] [associations]
symbol:MFP "Peroxisomal fatty acid beta-oxidation
multifunctional protein" species:39947 "Oryza sativa Japonica
Group" [GO:0003729 "mRNA binding" evidence=IDA] [GO:0004165
"dodecenoyl-CoA delta-isomerase activity" evidence=ISS] [GO:0004300
"enoyl-CoA hydratase activity" evidence=IDA] [GO:0005777
"peroxisome" evidence=NAS] [GO:0006635 "fatty acid beta-oxidation"
evidence=IDA] [GO:0008017 "microtubule binding" evidence=IDA]
[GO:0008692 "3-hydroxybutyryl-CoA epimerase activity" evidence=ISS]
[GO:0018812 "3-hydroxyacyl-CoA dehydratase activity" evidence=IDA]
InterPro:IPR001753 InterPro:IPR006108 InterPro:IPR006176
InterPro:IPR006180 InterPro:IPR008927 InterPro:IPR013328
InterPro:IPR018376 Pfam:PF00378 Pfam:PF00725 Pfam:PF02737
PROSITE:PS00067 PROSITE:PS00166 UniPathway:UPA00659
InterPro:IPR016040 GO:GO:0005777 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 Gene3D:1.10.1040.10 SUPFAM:SSF48179 GO:GO:0003729
GO:GO:0006635 eggNOG:COG1250 HOGENOM:HOG000261347 KO:K10527
ProtClustDB:CLSN2916032 GO:GO:0018812 GO:GO:0003857 GO:GO:0008692
GO:GO:0004165 GO:GO:0004300 GO:GO:0008017 GO:GO:0005874
EMBL:AF442962 EMBL:AP004771 EMBL:AF220609 RefSeq:NP_001046536.1
UniGene:Os.9729 ProteinModelPortal:Q8W1L6 STRING:Q8W1L6
PRIDE:Q8W1L6 EnsemblPlants:LOC_Os02g17390.1 GeneID:4328997
KEGG:dosa:Os02t0274100-01 KEGG:osa:4328997 Gramene:Q8W1L6
OMA:DIDIVWI Uniprot:Q8W1L6
Length = 726
Score = 141 (54.7 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 36/135 (26%), Positives = 61/135 (45%)
Query: 8 GRKSGKGYFVYAKGSKARPVNDGALAILKKY----SLQPQS---ALKDEDLQLRMVSRFV 60
G+ +GKGY++Y KG K +P + ++ +Y P L D+D+ + V
Sbjct: 575 GKSNGKGYYLYEKGGKPKP-DPSVQVVIDEYRRCAKTMPGGKPVTLSDQDILEMIFFPVV 633
Query: 61 NEAVLCLEETILNSPTDGDVGAVXXXXXXXXXXXXXRWVDWYGADKLVQKMLSYENLYGA 120
NEA ++E ++ +D D+ ++ W D GA + K+ + +YG
Sbjct: 634 NEACRVMDENVVIRASDLDIASILGMGFPKFRGGLVFWADTIGAPYIHSKLSKWTEIYGD 693
Query: 121 PFRPCQLLLDHAKDS 135
F+P L D AK S
Sbjct: 694 FFKPSSYLEDRAKRS 708
>UNIPROTKB|Q48GW3 [details] [associations]
symbol:fadB "Fatty acid oxidation complex subunit alpha"
species:264730 "Pseudomonas syringae pv. phaseolicola 1448A"
[GO:0003857 "3-hydroxyacyl-CoA dehydrogenase activity"
evidence=ISS] [GO:0004165 "dodecenoyl-CoA delta-isomerase activity"
evidence=ISS] [GO:0004300 "enoyl-CoA hydratase activity"
evidence=ISS] [GO:0008692 "3-hydroxybutyryl-CoA epimerase activity"
evidence=ISS] [GO:0009062 "fatty acid catabolic process"
evidence=ISS] HAMAP:MF_01621 InterPro:IPR001753 InterPro:IPR006108
InterPro:IPR006176 InterPro:IPR006180 InterPro:IPR008927
InterPro:IPR012799 InterPro:IPR013328 Pfam:PF00378 Pfam:PF00725
Pfam:PF02737 PROSITE:PS00067 PROSITE:PS00166 UniPathway:UPA00659
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
Gene3D:1.10.1040.10 SUPFAM:SSF48179 GO:GO:0006635 EMBL:CP000058
GenomeReviews:CP000058_GR eggNOG:COG1250 GO:GO:0003857
GO:GO:0008692 GO:GO:0004165 GO:GO:0004300 GO:GO:0009062
GO:GO:0016507 HOGENOM:HOG000261344 KO:K01825 OMA:GLYPGFG
ProtClustDB:PRK11730 TIGRFAMs:TIGR02437 RefSeq:YP_275370.1
ProteinModelPortal:Q48GW3 SMR:Q48GW3 STRING:Q48GW3 GeneID:3556880
KEGG:psp:PSPPH_3210 PATRIC:19975810 Uniprot:Q48GW3
Length = 721
Score = 137 (53.3 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 38/134 (28%), Positives = 61/134 (45%)
Query: 8 GRKSGKGYFVYAKGSKARP--VNDGALAILKKYSLQPQSALKDEDLQLRMVSRFVNEAVL 65
G+K+GKG++ Y K +P VND A+ + K + Q + DED+ M+ E V
Sbjct: 582 GQKNGKGFYAYETDKKGKPKKVNDPAVLDVLKPIVYEQREVSDEDIINWMMIPLCLETVR 641
Query: 66 CLEETILNSPTDGDVGAVXXXXXXXXXXXXXRWVDWYGADKLVQKMLSYENLYGAPFRPC 125
CLE+ I+ + + D+G + R++D G + V Y L GA ++P
Sbjct: 642 CLEDGIVETAAEADMGLIYGIGFPPFRGGALRYIDSIGVAEFVALADQYAEL-GALYQPT 700
Query: 126 QLLLDHAKDSSKKF 139
L + A F
Sbjct: 701 AKLREMASKGQSFF 714
>UNIPROTKB|Q9KNI1 [details] [associations]
symbol:fadB "Fatty acid oxidation complex subunit alpha"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0003857 "3-hydroxyacyl-CoA dehydrogenase activity"
evidence=ISS] [GO:0004165 "dodecenoyl-CoA delta-isomerase activity"
evidence=ISS] [GO:0004300 "enoyl-CoA hydratase activity"
evidence=ISS] [GO:0008692 "3-hydroxybutyryl-CoA epimerase activity"
evidence=ISS] [GO:0009062 "fatty acid catabolic process"
evidence=ISS] HAMAP:MF_01621 InterPro:IPR001753 InterPro:IPR006108
InterPro:IPR006176 InterPro:IPR006180 InterPro:IPR008927
InterPro:IPR012799 InterPro:IPR013328 Pfam:PF00378 Pfam:PF00725
Pfam:PF02737 PROSITE:PS00067 PROSITE:PS00166 UniPathway:UPA00659
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
Gene3D:1.10.1040.10 SUPFAM:SSF48179 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0006635 eggNOG:COG1250
GO:GO:0003857 GO:GO:0008692 GO:GO:0004165 GO:GO:0004300
GO:GO:0009062 GO:GO:0016507 KO:K01825 OMA:GLYPGFG
ProtClustDB:PRK11730 TIGRFAMs:TIGR02437 PIR:H82035
RefSeq:NP_232384.1 HSSP:P28793 ProteinModelPortal:Q9KNI1 SMR:Q9KNI1
DNASU:2614935 GeneID:2614935 KEGG:vch:VC2758 PATRIC:20084562
Uniprot:Q9KNI1
Length = 723
Score = 136 (52.9 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 43/136 (31%), Positives = 63/136 (46%)
Query: 8 GRKSGKGYFVYAKGSKARP---VNDGALAILKKYSLQPQSALKDEDLQLRMVSRFVNEAV 64
G+K+G G++ Y K +P +D LAIL PQS + L R + +NE V
Sbjct: 583 GQKNGSGFYQYTVDKKGKPKKAFSDDVLAILAPVCGAPQS-FDPQTLIERTMIPMINEVV 641
Query: 65 LCLEETILNSPTDGDVGAVXXXXXXXXXXXXXRWVDWYGADKLVQKMLSYENLYGAPFRP 124
LCLEE I+ S + D+ V R++D G V Y +L GA ++
Sbjct: 642 LCLEEGIIASAQEADMALVYGLGFPPFRGGVFRYLDTIGIANYVAMAEKYADL-GALYQV 700
Query: 125 CQLLLDHAKDSSKKFY 140
QLL + A+ + FY
Sbjct: 701 PQLLKNMAQQGTS-FY 715
>TIGR_CMR|VC_2758 [details] [associations]
symbol:VC_2758 "fatty oxidation complex, alpha subunit"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0003857
"3-hydroxyacyl-CoA dehydrogenase activity" evidence=ISS]
[GO:0004165 "dodecenoyl-CoA delta-isomerase activity" evidence=ISS]
[GO:0004300 "enoyl-CoA hydratase activity" evidence=ISS]
[GO:0008692 "3-hydroxybutyryl-CoA epimerase activity" evidence=ISS]
[GO:0009062 "fatty acid catabolic process" evidence=ISS]
HAMAP:MF_01621 InterPro:IPR001753 InterPro:IPR006108
InterPro:IPR006176 InterPro:IPR006180 InterPro:IPR008927
InterPro:IPR012799 InterPro:IPR013328 Pfam:PF00378 Pfam:PF00725
Pfam:PF02737 PROSITE:PS00067 PROSITE:PS00166 UniPathway:UPA00659
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
Gene3D:1.10.1040.10 SUPFAM:SSF48179 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0006635 eggNOG:COG1250
GO:GO:0003857 GO:GO:0008692 GO:GO:0004165 GO:GO:0004300
GO:GO:0009062 GO:GO:0016507 KO:K01825 OMA:GLYPGFG
ProtClustDB:PRK11730 TIGRFAMs:TIGR02437 PIR:H82035
RefSeq:NP_232384.1 HSSP:P28793 ProteinModelPortal:Q9KNI1 SMR:Q9KNI1
DNASU:2614935 GeneID:2614935 KEGG:vch:VC2758 PATRIC:20084562
Uniprot:Q9KNI1
Length = 723
Score = 136 (52.9 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 43/136 (31%), Positives = 63/136 (46%)
Query: 8 GRKSGKGYFVYAKGSKARP---VNDGALAILKKYSLQPQSALKDEDLQLRMVSRFVNEAV 64
G+K+G G++ Y K +P +D LAIL PQS + L R + +NE V
Sbjct: 583 GQKNGSGFYQYTVDKKGKPKKAFSDDVLAILAPVCGAPQS-FDPQTLIERTMIPMINEVV 641
Query: 65 LCLEETILNSPTDGDVGAVXXXXXXXXXXXXXRWVDWYGADKLVQKMLSYENLYGAPFRP 124
LCLEE I+ S + D+ V R++D G V Y +L GA ++
Sbjct: 642 LCLEEGIIASAQEADMALVYGLGFPPFRGGVFRYLDTIGIANYVAMAEKYADL-GALYQV 700
Query: 125 CQLLLDHAKDSSKKFY 140
QLL + A+ + FY
Sbjct: 701 PQLLKNMAQQGTS-FY 715
>UNIPROTKB|Q47ZB7 [details] [associations]
symbol:fadJ "Fatty oxidation complex, alpha subunit"
species:167879 "Colwellia psychrerythraea 34H" [GO:0003857
"3-hydroxyacyl-CoA dehydrogenase activity" evidence=ISS]
[GO:0004300 "enoyl-CoA hydratase activity" evidence=ISS]
[GO:0008692 "3-hydroxybutyryl-CoA epimerase activity" evidence=ISS]
[GO:0009062 "fatty acid catabolic process" evidence=ISS]
InterPro:IPR001753 InterPro:IPR006108 InterPro:IPR006176
InterPro:IPR006180 InterPro:IPR008927 InterPro:IPR012802
InterPro:IPR013328 InterPro:IPR018376 Pfam:PF00378 Pfam:PF00725
Pfam:PF02737 PROSITE:PS00067 PROSITE:PS00166 UniPathway:UPA00659
InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0051287
Gene3D:1.10.1040.10 SUPFAM:SSF48179 GO:GO:0006635 EMBL:CP000083
GenomeReviews:CP000083_GR eggNOG:COG1250 GO:GO:0003857
GO:GO:0008692 GO:GO:0004300 GO:GO:0009062 HOGENOM:HOG000261346
GO:GO:0016507 KO:K01782 ProtClustDB:PRK11154 TIGRFAMs:TIGR02440
RefSeq:YP_269853.2 ProteinModelPortal:Q47ZB7 STRING:Q47ZB7
GeneID:3520456 KEGG:cps:CPS_3156 PATRIC:21469297 OMA:VEVIAHK
BioCyc:CPSY167879:GI48-3205-MONOMER Uniprot:Q47ZB7
Length = 787
Score = 136 (52.9 bits), Expect = 5.2e-08, P = 5.2e-08
Identities = 37/145 (25%), Positives = 71/145 (48%)
Query: 8 GRKSGKGYFVYAKGSKARPVND---GALAILKK-----YSL---QPQSALKDEDLQLRMV 56
G+K KG++ Y K + + + + G + K+ YSL +P +L ++ R
Sbjct: 643 GKKVKKGFYQYEKPTFTKNLQNTFKGIKSGHKQVDETIYSLLNIKPMGSLSAVEISKRCT 702
Query: 57 SRFVNEAVLCLEETILNSPTDGDVGAVXXXXXXXXXXXXXRWVDWYGADKLVQKMLSYEN 116
+NEA C++E I+ + DGD+GA+ R++D GA +V ++ +
Sbjct: 703 YMMLNEAARCVDEGIVRNARDGDIGAIFGIGFPPFLGGPLRYIDKIGAKSVVAQLSQWAE 762
Query: 117 LYGAPFRPCQLLLDHAKDSSKKFYP 141
+G + PC+ L+ A++ + +YP
Sbjct: 763 QHGERYTPCEALITMAENDAV-YYP 786
>TIGR_CMR|CPS_3156 [details] [associations]
symbol:CPS_3156 "fatty oxidation complex, alpha subunit"
species:167879 "Colwellia psychrerythraea 34H" [GO:0003857
"3-hydroxyacyl-CoA dehydrogenase activity" evidence=ISS]
[GO:0004300 "enoyl-CoA hydratase activity" evidence=ISS]
[GO:0008692 "3-hydroxybutyryl-CoA epimerase activity" evidence=ISS]
[GO:0009062 "fatty acid catabolic process" evidence=ISS]
InterPro:IPR001753 InterPro:IPR006108 InterPro:IPR006176
InterPro:IPR006180 InterPro:IPR008927 InterPro:IPR012802
InterPro:IPR013328 InterPro:IPR018376 Pfam:PF00378 Pfam:PF00725
Pfam:PF02737 PROSITE:PS00067 PROSITE:PS00166 UniPathway:UPA00659
InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0051287
Gene3D:1.10.1040.10 SUPFAM:SSF48179 GO:GO:0006635 EMBL:CP000083
GenomeReviews:CP000083_GR eggNOG:COG1250 GO:GO:0003857
GO:GO:0008692 GO:GO:0004300 GO:GO:0009062 HOGENOM:HOG000261346
GO:GO:0016507 KO:K01782 ProtClustDB:PRK11154 TIGRFAMs:TIGR02440
RefSeq:YP_269853.2 ProteinModelPortal:Q47ZB7 STRING:Q47ZB7
GeneID:3520456 KEGG:cps:CPS_3156 PATRIC:21469297 OMA:VEVIAHK
BioCyc:CPSY167879:GI48-3205-MONOMER Uniprot:Q47ZB7
Length = 787
Score = 136 (52.9 bits), Expect = 5.2e-08, P = 5.2e-08
Identities = 37/145 (25%), Positives = 71/145 (48%)
Query: 8 GRKSGKGYFVYAKGSKARPVND---GALAILKK-----YSL---QPQSALKDEDLQLRMV 56
G+K KG++ Y K + + + + G + K+ YSL +P +L ++ R
Sbjct: 643 GKKVKKGFYQYEKPTFTKNLQNTFKGIKSGHKQVDETIYSLLNIKPMGSLSAVEISKRCT 702
Query: 57 SRFVNEAVLCLEETILNSPTDGDVGAVXXXXXXXXXXXXXRWVDWYGADKLVQKMLSYEN 116
+NEA C++E I+ + DGD+GA+ R++D GA +V ++ +
Sbjct: 703 YMMLNEAARCVDEGIVRNARDGDIGAIFGIGFPPFLGGPLRYIDKIGAKSVVAQLSQWAE 762
Query: 117 LYGAPFRPCQLLLDHAKDSSKKFYP 141
+G + PC+ L+ A++ + +YP
Sbjct: 763 QHGERYTPCEALITMAENDAV-YYP 786
>UNIPROTKB|P28793 [details] [associations]
symbol:fadB "Fatty acid oxidation complex subunit alpha"
species:296 "Pseudomonas fragi" [GO:0005515 "protein binding"
evidence=IPI] HAMAP:MF_01621 InterPro:IPR001753 InterPro:IPR006108
InterPro:IPR006176 InterPro:IPR006180 InterPro:IPR008927
InterPro:IPR012799 InterPro:IPR013328 InterPro:IPR018376
Pfam:PF00378 Pfam:PF00725 Pfam:PF02737 PROSITE:PS00067
PROSITE:PS00166 UniPathway:UPA00659 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 Gene3D:1.10.1040.10
SUPFAM:SSF48179 GO:GO:0006635 GO:GO:0003857 GO:GO:0008692
GO:GO:0004165 GO:GO:0004300 GO:GO:0016507 EMBL:D10390 PDB:1WDK
PDB:1WDL PDB:1WDM PDB:2D3T PDBsum:1WDK PDBsum:1WDL PDBsum:1WDM
PDBsum:2D3T TIGRFAMs:TIGR02437 PIR:JX0199 ProteinModelPortal:P28793
SMR:P28793 DIP:DIP-29089N IntAct:P28793 EvolutionaryTrace:P28793
Uniprot:P28793
Length = 715
Score = 134 (52.2 bits), Expect = 7.4e-08, P = 7.4e-08
Identities = 39/135 (28%), Positives = 62/135 (45%)
Query: 8 GRKSGKGYFVYA---KGSKARPVNDGALAILKKYSLQPQSALKDEDLQLRMVSRFVNEAV 64
G+K+GKG++ Y KG + + V+ L +LK + Q + DED+ M+ E V
Sbjct: 582 GQKNGKGFYAYEADKKGKQKKLVDSSVLEVLKPIVYE-QRDVTDEDIINWMMIPLCLETV 640
Query: 65 LCLEETILNSPTDGDVGAVXXXXXXXXXXXXXRWVDWYGADKLVQKMLSYENLYGAPFRP 124
CLE+ I+ + + D+G V R++D G + V Y L GA + P
Sbjct: 641 RCLEDGIVETAAEADMGLVYGIGFPLFRGGALRYIDSIGVAEFVALADQYAEL-GALYHP 699
Query: 125 CQLLLDHAKDSSKKF 139
L + AK+ F
Sbjct: 700 TAKLREMAKNGQSFF 714
>TAIR|locus:2119891 [details] [associations]
symbol:AIM1 "ABNORMAL INFLORESCENCE MERISTEM"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003857 "3-hydroxyacyl-CoA dehydrogenase
activity" evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0006631 "fatty acid metabolic process" evidence=IEA]
[GO:0008152 "metabolic process" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0004300 "enoyl-CoA hydratase activity"
evidence=IMP;IDA] [GO:0006635 "fatty acid beta-oxidation"
evidence=ISS] [GO:0007275 "multicellular organismal development"
evidence=IMP] [GO:0009845 "seed germination" evidence=IMP]
[GO:0009908 "flower development" evidence=IMP] [GO:0009507
"chloroplast" evidence=IDA] [GO:0005618 "cell wall" evidence=IDA]
[GO:0009695 "jasmonic acid biosynthetic process" evidence=IMP]
[GO:0005777 "peroxisome" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] InterPro:IPR001753 InterPro:IPR006108
InterPro:IPR006176 InterPro:IPR006180 InterPro:IPR008927
InterPro:IPR013328 InterPro:IPR018376 Pfam:PF00378 Pfam:PF00725
Pfam:PF02737 PROSITE:PS00067 PROSITE:PS00166 UniPathway:UPA00659
InterPro:IPR016040 GO:GO:0009506 GO:GO:0005618 GO:GO:0009507
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0005777 GO:GO:0000166
Gene3D:3.40.50.720 EMBL:AL078470 EMBL:AL161574 GO:GO:0050662
Gene3D:1.10.1040.10 SUPFAM:SSF48179 GO:GO:0009695 GO:GO:0003729
GO:GO:0006635 GO:GO:0009908 EMBL:AF123253 EMBL:AY059815
EMBL:AY072072 EMBL:AY096659 IPI:IPI00545226 PIR:T08956
RefSeq:NP_194630.1 UniGene:At.3404 UniGene:At.48915 HSSP:P00348
ProteinModelPortal:Q9ZPI6 SMR:Q9ZPI6 STRING:Q9ZPI6 PaxDb:Q9ZPI6
PRIDE:Q9ZPI6 ProMEX:Q9ZPI6 EnsemblPlants:AT4G29010.1 GeneID:829022
KEGG:ath:AT4G29010 TAIR:At4g29010 eggNOG:COG1250
HOGENOM:HOG000261347 InParanoid:Q9ZPI6 KO:K10527 OMA:NYEAQVK
PhylomeDB:Q9ZPI6 ProtClustDB:CLSN2916032
BioCyc:MetaCyc:AT4G29010-MONOMER Genevestigator:Q9ZPI6
GO:GO:0018812 GO:GO:0003857 GO:GO:0008692 GO:GO:0004165
GO:GO:0004300 Uniprot:Q9ZPI6
Length = 721
Score = 130 (50.8 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 33/132 (25%), Positives = 66/132 (50%)
Query: 8 GRKSGKGYFVYAKGSKARPVNDGALAILKKY----SLQPQS---ALKDEDLQLRMVSRFV 60
G+ +G+GY++Y KGSK +P + L+I++K ++ P ++ D+++ ++ V
Sbjct: 575 GKINGRGYYIYEKGSKPKP-DPSVLSIVEKSRKLTNIMPGGKPISVTDKEIVEMILFPVV 633
Query: 61 NEAVLCLEETILNSPTDGDVGAVXXXXXXXXXXXXXRWVDWYGADKLVQKMLSYENLYGA 120
NEA L+E ++ +D D+ +V W D G + +++ YG+
Sbjct: 634 NEACRVLDEGVVIRASDLDIASVLGMSFPSYRGGIVFWADTVGPKYIYERLKKLSETYGS 693
Query: 121 PFRPCQLLLDHA 132
F+P + L + A
Sbjct: 694 FFKPSRYLEERA 705
>TIGR_CMR|SPO_0772 [details] [associations]
symbol:SPO_0772 "enoyl-CoA
hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003857 "3-hydroxyacyl-CoA
dehydrogenase activity" evidence=ISS] [GO:0004300 "enoyl-CoA
hydratase activity" evidence=ISS] [GO:0009062 "fatty acid catabolic
process" evidence=ISS] InterPro:IPR001753 InterPro:IPR006108
InterPro:IPR006176 InterPro:IPR008927 InterPro:IPR013328
InterPro:IPR018376 Pfam:PF00378 Pfam:PF00725 Pfam:PF02737
PROSITE:PS00166 InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0050662
Gene3D:1.10.1040.10 SUPFAM:SSF48179 GO:GO:0006631 GO:GO:0016853
HOGENOM:HOG000261347 GO:GO:0003857 KO:K07516 RefSeq:YP_166025.1
ProteinModelPortal:Q5LVD0 GeneID:3194899 KEGG:sil:SPO0772
PATRIC:23374819 OMA:ICLADAG ProtClustDB:CLSK930293 Uniprot:Q5LVD0
Length = 698
Score = 129 (50.5 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 39/127 (30%), Positives = 63/127 (49%)
Query: 8 GRKSGKGYFVYAKGSKARPVNDGALAILK----KYSLQPQSALKDEDLQLRMVSRFVNEA 63
G+K+GKGY+ YA G+KAR N L +++ + + P++ KDE ++ R ++ VNEA
Sbjct: 557 GQKTGKGYYDYAAGAKARVPNPEVLPLIEAERAQQGITPRAFSKDEIVR-RYMAAMVNEA 615
Query: 64 VLCLEETILNSPTDGDVGAVXXXXXXXXXXXXXRWVDWYGADKLVQ--KMLSYENLYGAP 121
+ E I P D DV + +W D G +L+ K + E+ Y
Sbjct: 616 AKVVGEGIARRPLDVDVTLLYGYGFPRYRGGPLKWADMQGLPELLADIKRWAAEDAYF-- 673
Query: 122 FRPCQLL 128
++P LL
Sbjct: 674 WQPAPLL 680
>TIGR_CMR|SPO_A0424 [details] [associations]
symbol:SPO_A0424 "fatty oxidation complex, alpha subunit"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003857
"3-hydroxyacyl-CoA dehydrogenase activity" evidence=ISS]
[GO:0004300 "enoyl-CoA hydratase activity" evidence=ISS]
[GO:0008692 "3-hydroxybutyryl-CoA epimerase activity" evidence=ISS]
[GO:0009062 "fatty acid catabolic process" evidence=ISS]
InterPro:IPR001753 InterPro:IPR006108 InterPro:IPR006176
InterPro:IPR008927 InterPro:IPR013328 Pfam:PF00378 Pfam:PF00725
Pfam:PF02737 InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 Gene3D:1.10.1040.10 SUPFAM:SSF48179 GO:GO:0006631
GO:GO:0003857 EMBL:CP000032 GenomeReviews:CP000032_GR KO:K01782
HOGENOM:HOG000261345 RefSeq:YP_165251.1 ProteinModelPortal:Q5LKF7
GeneID:3196739 KEGG:sil:SPOA0424 PATRIC:23382202 OMA:MPGQSAN
Uniprot:Q5LKF7
Length = 714
Score = 126 (49.4 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 33/127 (25%), Positives = 62/127 (48%)
Query: 8 GRKSGKGYFVYAKGSKARPVNDGALAILKKYSLQPQSALKDEDLQLRMVSRFVNEAVLCL 67
GR +GKG++ Y + + + G A K+ + P + +KD R++ R V E++ CL
Sbjct: 590 GRATGKGFYDY--DGQGKTIWPGLAAWRKEGADIPDADIKD-----RILFRAVLESLRCL 642
Query: 68 EETILNSPTDGDVGAVXXXXXXXXXXXXXRWVDWYGADKLVQKMLSYENLYGAPFRPCQL 127
EE +L + DG++G++ ++V+ YG + + + YG F P ++
Sbjct: 643 EEGVLRTVEDGNIGSILGIGAPVHTGGYLQYVNTYGPARFLARCEELAGKYGDRFAPPEI 702
Query: 128 LLDHAKD 134
L H +
Sbjct: 703 LRTHVAE 709
>UNIPROTKB|Q489W3 [details] [associations]
symbol:fadB "Fatty acid oxidation complex subunit alpha"
species:167879 "Colwellia psychrerythraea 34H" [GO:0003857
"3-hydroxyacyl-CoA dehydrogenase activity" evidence=ISS]
[GO:0004165 "dodecenoyl-CoA delta-isomerase activity" evidence=ISS]
[GO:0004300 "enoyl-CoA hydratase activity" evidence=ISS]
[GO:0008692 "3-hydroxybutyryl-CoA epimerase activity" evidence=ISS]
[GO:0009062 "fatty acid catabolic process" evidence=ISS]
HAMAP:MF_01621 InterPro:IPR001753 InterPro:IPR006108
InterPro:IPR006176 InterPro:IPR006180 InterPro:IPR008927
InterPro:IPR012799 InterPro:IPR013328 InterPro:IPR018376
Pfam:PF00378 Pfam:PF00725 Pfam:PF02737 PROSITE:PS00067
PROSITE:PS00166 UniPathway:UPA00659 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 Gene3D:1.10.1040.10
SUPFAM:SSF48179 GO:GO:0006635 EMBL:CP000083
GenomeReviews:CP000083_GR eggNOG:COG1250 GO:GO:0003857
GO:GO:0008692 GO:GO:0004165 GO:GO:0004300 GO:GO:0009062
GO:GO:0016507 RefSeq:YP_267151.1 ProteinModelPortal:Q489W3
SMR:Q489W3 STRING:Q489W3 GeneID:3520494 KEGG:cps:CPS_0393
PATRIC:21464151 HOGENOM:HOG000261344 KO:K01825 OMA:GLYPGFG
ProtClustDB:PRK11730 BioCyc:CPSY167879:GI48-488-MONOMER
TIGRFAMs:TIGR02437 Uniprot:Q489W3
Length = 722
Score = 123 (48.4 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 34/136 (25%), Positives = 64/136 (47%)
Query: 8 GRKSGKGYFVYAKGSKARPVN---DGALAILKKYSLQPQSALKDEDLQLRMVSRFVNEAV 64
G+K+GKG++ + K + RP+ A +L ++ + E++ RM+ VNE V
Sbjct: 583 GQKNGKGFYDHIKDKRGRPMKVPAPVAYELLGQHCADKKD-FSSEEIIARMMIPMVNEVV 641
Query: 65 LCLEETILNSPTDGDVGAVXXXXXXXXXXXXXRWVDWYGADKLVQKMLSYENLYGAPFRP 124
CLEE ++++ + D+G + R+++ G D + Y +L G +
Sbjct: 642 RCLEEGVVDTAAEADMGLIYGVGFPPFRGGAIRYLETLGLDNFIAMADKYTDL-GEIYHV 700
Query: 125 CQLLLDHAKDSSKKFY 140
L + AK S K ++
Sbjct: 701 TDGLREMAK-SGKSYF 715
>TIGR_CMR|CPS_0393 [details] [associations]
symbol:CPS_0393 "fatty oxidation complex, alpha subunit"
species:167879 "Colwellia psychrerythraea 34H" [GO:0003857
"3-hydroxyacyl-CoA dehydrogenase activity" evidence=ISS]
[GO:0004165 "dodecenoyl-CoA delta-isomerase activity" evidence=ISS]
[GO:0004300 "enoyl-CoA hydratase activity" evidence=ISS]
[GO:0008692 "3-hydroxybutyryl-CoA epimerase activity" evidence=ISS]
[GO:0009062 "fatty acid catabolic process" evidence=ISS]
HAMAP:MF_01621 InterPro:IPR001753 InterPro:IPR006108
InterPro:IPR006176 InterPro:IPR006180 InterPro:IPR008927
InterPro:IPR012799 InterPro:IPR013328 InterPro:IPR018376
Pfam:PF00378 Pfam:PF00725 Pfam:PF02737 PROSITE:PS00067
PROSITE:PS00166 UniPathway:UPA00659 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 Gene3D:1.10.1040.10
SUPFAM:SSF48179 GO:GO:0006635 EMBL:CP000083
GenomeReviews:CP000083_GR eggNOG:COG1250 GO:GO:0003857
GO:GO:0008692 GO:GO:0004165 GO:GO:0004300 GO:GO:0009062
GO:GO:0016507 RefSeq:YP_267151.1 ProteinModelPortal:Q489W3
SMR:Q489W3 STRING:Q489W3 GeneID:3520494 KEGG:cps:CPS_0393
PATRIC:21464151 HOGENOM:HOG000261344 KO:K01825 OMA:GLYPGFG
ProtClustDB:PRK11730 BioCyc:CPSY167879:GI48-488-MONOMER
TIGRFAMs:TIGR02437 Uniprot:Q489W3
Length = 722
Score = 123 (48.4 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 34/136 (25%), Positives = 64/136 (47%)
Query: 8 GRKSGKGYFVYAKGSKARPVN---DGALAILKKYSLQPQSALKDEDLQLRMVSRFVNEAV 64
G+K+GKG++ + K + RP+ A +L ++ + E++ RM+ VNE V
Sbjct: 583 GQKNGKGFYDHIKDKRGRPMKVPAPVAYELLGQHCADKKD-FSSEEIIARMMIPMVNEVV 641
Query: 65 LCLEETILNSPTDGDVGAVXXXXXXXXXXXXXRWVDWYGADKLVQKMLSYENLYGAPFRP 124
CLEE ++++ + D+G + R+++ G D + Y +L G +
Sbjct: 642 RCLEEGVVDTAAEADMGLIYGVGFPPFRGGAIRYLETLGLDNFIAMADKYTDL-GEIYHV 700
Query: 125 CQLLLDHAKDSSKKFY 140
L + AK S K ++
Sbjct: 701 TDGLREMAK-SGKSYF 715
>TIGR_CMR|SO_0021 [details] [associations]
symbol:SO_0021 "fatty oxidation complex, alpha subunit"
species:211586 "Shewanella oneidensis MR-1" [GO:0003857
"3-hydroxyacyl-CoA dehydrogenase activity" evidence=ISS]
[GO:0004165 "dodecenoyl-CoA delta-isomerase activity" evidence=ISS]
[GO:0004300 "enoyl-CoA hydratase activity" evidence=ISS]
[GO:0008692 "3-hydroxybutyryl-CoA epimerase activity" evidence=ISS]
[GO:0009062 "fatty acid catabolic process" evidence=ISS]
HAMAP:MF_01621 InterPro:IPR001753 InterPro:IPR006108
InterPro:IPR006176 InterPro:IPR006180 InterPro:IPR008927
InterPro:IPR012799 InterPro:IPR013328 Pfam:PF00378 Pfam:PF00725
Pfam:PF02737 PROSITE:PS00067 PROSITE:PS00166 UniPathway:UPA00659
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
Gene3D:1.10.1040.10 SUPFAM:SSF48179 GO:GO:0006635 EMBL:AE014299
GenomeReviews:AE014299_GR eggNOG:COG1250 GO:GO:0003857
GO:GO:0008692 GO:GO:0004165 GO:GO:0004300 GO:GO:0016507
HOGENOM:HOG000261344 KO:K01825 ProtClustDB:PRK11730
TIGRFAMs:TIGR02437 OMA:NDQFVKG RefSeq:NP_715663.1
ProteinModelPortal:Q8EKR9 SMR:Q8EKR9 GeneID:1167919
KEGG:son:SO_0021 PATRIC:23519733 Uniprot:Q8EKR9
Length = 716
Score = 122 (48.0 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 33/115 (28%), Positives = 54/115 (46%)
Query: 8 GRKSGKGYFVYAKGSKARPVND---GALAILKKYSLQPQSALKDEDLQLRMVSRFVNEAV 64
G+K+GKG++ Y+ S+ +P D + +LK + Q A +++ R + + E V
Sbjct: 582 GQKNGKGFYAYSVDSRGKPKKDVDPTSYELLKA-AFGEQKAFDADEIIARTMIPMIIETV 640
Query: 65 LCLEETILNSPTDGDVGAVXXXXXXXXXXXXXRWVDWYGADKLVQKMLSYENLYG 119
CLEE I+ SP + D+G V R++D G V Y +L G
Sbjct: 641 RCLEEGIVASPAEADMGLVYGLGFPPFRGGVFRYLDTMGVANFVALADKYAHLGG 695
>UNIPROTKB|Q39659 [details] [associations]
symbol:Q39659 "Glyoxysomal fatty acid beta-oxidation
multifunctional protein MFP-a" species:3659 "Cucumis sativus"
[GO:0004165 "dodecenoyl-CoA delta-isomerase activity" evidence=IDA]
[GO:0004300 "enoyl-CoA hydratase activity" evidence=IDA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IDA] [GO:0008692
"3-hydroxybutyryl-CoA epimerase activity" evidence=IDA] [GO:0009514
"glyoxysome" evidence=NAS] [GO:0018812 "3-hydroxyacyl-CoA
dehydratase activity" evidence=IDA] InterPro:IPR001753
InterPro:IPR006108 InterPro:IPR006176 InterPro:IPR006180
InterPro:IPR008927 InterPro:IPR013328 InterPro:IPR018376
Pfam:PF00378 Pfam:PF00725 Pfam:PF02737 PROSITE:PS00067
PROSITE:PS00166 UniPathway:UPA00659 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 Gene3D:1.10.1040.10
SUPFAM:SSF48179 GO:GO:0006635 GO:GO:0009514 GO:GO:0018812
GO:GO:0003857 GO:GO:0008692 GO:GO:0004165 GO:GO:0004300 EMBL:X78996
PIR:T10464 ProteinModelPortal:Q39659 Uniprot:Q39659
Length = 725
Score = 112 (44.5 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 35/132 (26%), Positives = 56/132 (42%)
Query: 8 GRKSGKGYFVYAKGSKARPVNDGALAILKK------YSLQPQ-SALKDEDLQLRMVSRFV 60
G + KG++VY K KA P N ++K S+ P+ + L ++D+ + V
Sbjct: 578 GESTRKGFYVYDKNRKAGP-NPELKKYIEKARNSSGVSVDPKLTKLPEKDIVEMIFFPVV 636
Query: 61 NEAVLCLEETILNSPTDGDVGAVXXXXXXXXXXXXXRWVDWYGADKLVQKMLSYENLYGA 120
NEA L E I D D+ V W D G++ + ++ + YG
Sbjct: 637 NEACRVLAEGIAVKAADLDIAGVMGMGFPSYRGGLMFWADSLGSNYIYSRLEEWSKQYGG 696
Query: 121 PFRPCQLLLDHA 132
F+PC L + A
Sbjct: 697 FFKPCGYLAERA 708
>TIGR_CMR|SPO_2920 [details] [associations]
symbol:SPO_2920 "fatty oxidation complex, alpha subunit"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003857
"3-hydroxyacyl-CoA dehydrogenase activity" evidence=ISS]
[GO:0004300 "enoyl-CoA hydratase activity" evidence=ISS]
[GO:0008692 "3-hydroxybutyryl-CoA epimerase activity" evidence=ISS]
[GO:0009062 "fatty acid catabolic process" evidence=ISS]
InterPro:IPR001753 InterPro:IPR006108 InterPro:IPR006176
InterPro:IPR008927 InterPro:IPR013328 Pfam:PF00378 Pfam:PF00725
Pfam:PF02737 InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0050662
Gene3D:1.10.1040.10 SUPFAM:SSF48179 GO:GO:0006631 GO:GO:0003857
KO:K01782 HOGENOM:HOG000261345 RefSeq:YP_168128.1
ProteinModelPortal:Q5LPC8 GeneID:3193840 KEGG:sil:SPO2920
PATRIC:23379265 OMA:IALVTWD ProtClustDB:CLSK933996 Uniprot:Q5LPC8
Length = 733
Score = 111 (44.1 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 39/133 (29%), Positives = 52/133 (39%)
Query: 8 GRKSGKGYFVYAKGSKARPVNDGALAILKKYSLQPQSALKDEDLQLRMVSRFVNEAVLCL 67
GRK+ G+F Y K G + KY L + E +Q R++ V EAV L
Sbjct: 595 GRKANAGFFDYDDKGKRTGYWQG---LQDKYPLAEEQPDLIE-VQERLMFAQVLEAVRAL 650
Query: 68 EETILNSPTDGDVGAVXXXXXXXXXXXXXRWVDWYGADKLVQKMLSYENLYGAPFRPCQL 127
EE +L +GDVGA+ W+D G + YG F C
Sbjct: 651 EEGVLEDIREGDVGAILAWGFAPWSGGPLSWIDIIGTPYAADRCDQLAAKYGERFA-CPP 709
Query: 128 LLDHAKDSSKKFY 140
LL D + FY
Sbjct: 710 LLREMADKGQSFY 722
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.137 0.429 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 142 129 0.00091 102 3 11 22 0.41 31
29 0.41 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 33
No. of states in DFA: 575 (61 KB)
Total size of DFA: 141 KB (2087 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:05
No. of threads or processors used: 24
Search cpu time: 11.89u 0.07s 11.96t Elapsed: 00:00:06
Total cpu time: 11.89u 0.07s 11.96t Elapsed: 00:00:11
Start: Thu Aug 15 12:22:44 2013 End: Thu Aug 15 12:22:55 2013