BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9059
(269 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P40939|ECHA_HUMAN Trifunctional enzyme subunit alpha, mitochondrial OS=Homo sapiens
GN=HADHA PE=1 SV=2
Length = 763
Score = 223 bits (568), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 109/169 (64%), Positives = 131/169 (77%), Gaps = 3/169 (1%)
Query: 101 LMGSNGLAMVFPLQEQIPI-QTPHLIIGMHYFSPVDKMQLLEIITTEQTSQDTAASAVAV 159
+ SN A+ P+ E + + P +IGMHYFSPVDKMQLLEIITTE+TS+DT+ASAVAV
Sbjct: 471 IFASNTSAL--PISEIAAVSKRPEKVIGMHYFSPVDKMQLLEIITTEKTSKDTSASAVAV 528
Query: 160 GLKQGKVVITVKDGPGFYTTRILSTMLSEAMRILQEGTSPKDLDRLTKQFGFPVGAATLS 219
GLKQGKV+I VKDGPGFYTTR L+ M+SE +RILQEG PK LD LT FGFPVGAATL
Sbjct: 529 GLKQGKVIIVVKDGPGFYTTRCLAPMMSEVIRILQEGVDPKKLDSLTTSFGFPVGAATLV 588
Query: 220 DEVGIDVGAHIAKDLSKTFGDRFSGGNLNVLNEMVEKGYLDFKNKDGYY 268
DEVG+DV H+A+DL K FG+RF GGN +L +MV KG+L K+ G+Y
Sbjct: 589 DEVGVDVAKHVAEDLGKVFGERFGGGNPELLTQMVSKGFLGRKSGKGFY 637
>sp|Q29554|ECHA_PIG Trifunctional enzyme subunit alpha, mitochondrial OS=Sus scrofa
GN=HADHA PE=1 SV=1
Length = 763
Score = 221 bits (564), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 104/160 (65%), Positives = 127/160 (79%), Gaps = 1/160 (0%)
Query: 110 VFPLQEQIPI-QTPHLIIGMHYFSPVDKMQLLEIITTEQTSQDTAASAVAVGLKQGKVVI 168
P+ E + + P +IGMHYFSPVDKMQLLEIITTE+TS+D+ ASAV VGLKQGKV+I
Sbjct: 478 ALPISEIAAVSKRPEKVIGMHYFSPVDKMQLLEIITTEKTSKDSTASAVEVGLKQGKVII 537
Query: 169 TVKDGPGFYTTRILSTMLSEAMRILQEGTSPKDLDRLTKQFGFPVGAATLSDEVGIDVGA 228
VKDGPGFYTTR L+ M+SE +RILQEG PK LD LT FGFPVGAATL DEVG+DV
Sbjct: 538 VVKDGPGFYTTRCLAPMMSEVLRILQEGVGPKKLDSLTTSFGFPVGAATLMDEVGMDVAK 597
Query: 229 HIAKDLSKTFGDRFSGGNLNVLNEMVEKGYLDFKNKDGYY 268
H+A++L K FG+RF+GGNL+VL +M+ KG+L K+ G+Y
Sbjct: 598 HVAENLGKIFGERFAGGNLDVLKQMISKGFLGRKSGKGFY 637
>sp|Q8BMS1|ECHA_MOUSE Trifunctional enzyme subunit alpha, mitochondrial OS=Mus musculus
GN=Hadha PE=1 SV=1
Length = 763
Score = 206 bits (524), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 102/149 (68%), Positives = 123/149 (82%)
Query: 120 QTPHLIIGMHYFSPVDKMQLLEIITTEQTSQDTAASAVAVGLKQGKVVITVKDGPGFYTT 179
+ P +IGMHYFSPVDKMQLLEIITT++TS+DT ASAVAVGL+QGKV+I VKDGPGFYTT
Sbjct: 489 KRPEKVIGMHYFSPVDKMQLLEIITTDKTSKDTTASAVAVGLRQGKVIIVVKDGPGFYTT 548
Query: 180 RILSTMLSEAMRILQEGTSPKDLDRLTKQFGFPVGAATLSDEVGIDVGAHIAKDLSKTFG 239
R L+ M+SE MRILQEG PK LD LT FGFPVGAATL+DEVG+DV H+A+DL K FG
Sbjct: 549 RCLAPMMSEVMRILQEGVDPKKLDALTTGFGFPVGAATLADEVGVDVAQHVAEDLGKAFG 608
Query: 240 DRFSGGNLNVLNEMVEKGYLDFKNKDGYY 268
+RF GG++ +L +MV KG+L K+ G+Y
Sbjct: 609 ERFGGGSVELLKQMVSKGFLGRKSGKGFY 637
>sp|Q64428|ECHA_RAT Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus
norvegicus GN=Hadha PE=1 SV=2
Length = 763
Score = 205 bits (522), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 104/149 (69%), Positives = 122/149 (81%)
Query: 120 QTPHLIIGMHYFSPVDKMQLLEIITTEQTSQDTAASAVAVGLKQGKVVITVKDGPGFYTT 179
Q P +IGMHYFSPVDKMQLLEIITT++TS+DT ASAVAVGLKQGKV+I VKDGPGFYTT
Sbjct: 489 QRPEKVIGMHYFSPVDKMQLLEIITTDKTSKDTTASAVAVGLKQGKVIIVVKDGPGFYTT 548
Query: 180 RILSTMLSEAMRILQEGTSPKDLDRLTKQFGFPVGAATLSDEVGIDVGAHIAKDLSKTFG 239
R L+ M+SE +RILQEG PK LD LT FGFPVGAATL+DEVGIDV H+A+DL K FG
Sbjct: 549 RCLAPMMSEVIRILQEGVDPKKLDALTTGFGFPVGAATLADEVGIDVAQHVAEDLGKAFG 608
Query: 240 DRFSGGNLNVLNEMVEKGYLDFKNKDGYY 268
+RF GG++ +L MV KG+L K+ G+Y
Sbjct: 609 ERFGGGSVELLKLMVSKGFLGRKSGKGFY 637
>sp|B0TL21|FADJ_SHEHH Fatty acid oxidation complex subunit alpha OS=Shewanella
halifaxensis (strain HAW-EB4) GN=fadJ PE=3 SV=1
Length = 708
Score = 134 bits (337), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 70/147 (47%), Positives = 94/147 (63%), Gaps = 2/147 (1%)
Query: 122 PHLIIGMHYFSPVDKMQLLEIITTEQTSQDTAASAVAVGLKQGKVVITVKDGPGFYTTRI 181
P +IG+HYFSPV+KM L+E+I E+TS +T A+ VA KQGK I V+DG GFY RI
Sbjct: 443 PENVIGLHYFSPVEKMPLVEVIAHEKTSAETIATTVAFAKKQGKTPIVVQDGAGFYVNRI 502
Query: 182 LSTMLSEAMRILQEGTSPKDLDRLTKQFGFPVGAATLSDEVGIDVGAHIAKDLSKTFGDR 241
L+ ++EA ++L EG S + LD+ +FGFPVG TL DEVGIDVGA I+ L K G+R
Sbjct: 503 LALYMNEAAQLLLEGQSVEHLDKALIKFGFPVGPMTLLDEVGIDVGAKISPILEKELGER 562
Query: 242 FSGGNLNVLNEMVEKGYLDFKNKDGYY 268
F ++++ KN G+Y
Sbjct: 563 FKAP--TAFDKLLADDRKGRKNGKGFY 587
>sp|A3QFP3|FADJ_SHELP Fatty acid oxidation complex subunit alpha OS=Shewanella loihica
(strain ATCC BAA-1088 / PV-4) GN=fadJ PE=3 SV=1
Length = 706
Score = 132 bits (333), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 92/149 (61%), Gaps = 2/149 (1%)
Query: 120 QTPHLIIGMHYFSPVDKMQLLEIITTEQTSQDTAASAVAVGLKQGKVVITVKDGPGFYTT 179
+ P +IG+HYFSPV+KM L+E+I ++TS T A+ VA KQGK I VKDG GFY
Sbjct: 439 ERPENVIGLHYFSPVEKMPLVEVIAHDKTSPQTIATTVAFARKQGKTPIVVKDGAGFYVN 498
Query: 180 RILSTMLSEAMRILQEGTSPKDLDRLTKQFGFPVGAATLSDEVGIDVGAHIAKDLSKTFG 239
RIL+ ++EA +L EG S LD+ +FGFPVG TL DEVGIDVGA I+ L K G
Sbjct: 499 RILALYMNEAANLLLEGQSVDHLDKALVKFGFPVGPMTLLDEVGIDVGAKISPILEKELG 558
Query: 240 DRFSGGNLNVLNEMVEKGYLDFKNKDGYY 268
+RF ++++ KN G+Y
Sbjct: 559 ERFKAP--AAFDKLLADDRKGRKNGKGFY 585
>sp|Q0HKD1|FADJ_SHESM Fatty acid oxidation complex subunit alpha OS=Shewanella sp.
(strain MR-4) GN=fadJ PE=3 SV=1
Length = 709
Score = 132 bits (333), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/147 (47%), Positives = 93/147 (63%), Gaps = 2/147 (1%)
Query: 122 PHLIIGMHYFSPVDKMQLLEIITTEQTSQDTAASAVAVGLKQGKVVITVKDGPGFYTTRI 181
P +IG+HYFSPV+KM L+E+I +TS +T A+ VA KQGK I V+DG GFY RI
Sbjct: 441 PENVIGLHYFSPVEKMPLVEVIAHAKTSPETIATTVAFARKQGKTPIVVQDGAGFYVNRI 500
Query: 182 LSTMLSEAMRILQEGTSPKDLDRLTKQFGFPVGAATLSDEVGIDVGAHIAKDLSKTFGDR 241
L+ ++EA ++L EG S + LD+ +FGFPVG TL DEVGIDVGA IA L K G+R
Sbjct: 501 LALYMNEAAQLLLEGQSIEHLDKALVKFGFPVGPITLLDEVGIDVGAKIAPILEKELGER 560
Query: 242 FSGGNLNVLNEMVEKGYLDFKNKDGYY 268
F ++++ KN G+Y
Sbjct: 561 FKAP--AAFDKLLSDDRKGRKNGKGFY 585
>sp|A0KV76|FADJ_SHESA Fatty acid oxidation complex subunit alpha OS=Shewanella sp.
(strain ANA-3) GN=fadJ PE=3 SV=1
Length = 709
Score = 132 bits (333), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/147 (47%), Positives = 93/147 (63%), Gaps = 2/147 (1%)
Query: 122 PHLIIGMHYFSPVDKMQLLEIITTEQTSQDTAASAVAVGLKQGKVVITVKDGPGFYTTRI 181
P +IG+HYFSPV+KM L+E+I +TS +T A+ VA KQGK I V+DG GFY RI
Sbjct: 441 PENVIGLHYFSPVEKMPLVEVIAHAKTSPETIATTVAFARKQGKTPIVVQDGAGFYVNRI 500
Query: 182 LSTMLSEAMRILQEGTSPKDLDRLTKQFGFPVGAATLSDEVGIDVGAHIAKDLSKTFGDR 241
L+ ++EA ++L EG S + LD+ +FGFPVG TL DEVGIDVGA IA L K G+R
Sbjct: 501 LALYMNEAAQLLLEGQSIEHLDKALVKFGFPVGPITLLDEVGIDVGAKIAPILEKELGER 560
Query: 242 FSGGNLNVLNEMVEKGYLDFKNKDGYY 268
F ++++ KN G+Y
Sbjct: 561 FKAP--AAFDKLLSDDRKGRKNGKGFY 585
>sp|Q5QXM1|FADJ_IDILO Fatty acid oxidation complex subunit alpha OS=Idiomarina loihiensis
(strain ATCC BAA-735 / DSM 15497 / L2-TR) GN=fadJ PE=3
SV=1
Length = 708
Score = 132 bits (333), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 91/149 (61%), Gaps = 2/149 (1%)
Query: 120 QTPHLIIGMHYFSPVDKMQLLEIITTEQTSQDTAASAVAVGLKQGKVVITVKDGPGFYTT 179
+ P +IG+HYFSPVDKM L EIIT TS T A+ V++ KQGK I VKDG GFY
Sbjct: 441 KRPEQVIGLHYFSPVDKMPLAEIITHPGTSDKTIATTVSLAKKQGKTPIVVKDGAGFYVN 500
Query: 180 RILSTMLSEAMRILQEGTSPKDLDRLTKQFGFPVGAATLSDEVGIDVGAHIAKDLSKTFG 239
RIL+ ++EA R+L G + +D+ +FGFPVG TL DEVGIDV A +A L K G
Sbjct: 501 RILAPYMNEAARLLLAGEPIEHIDKTLVKFGFPVGPITLLDEVGIDVAAKVAPVLVKELG 560
Query: 240 DRFSGGNLNVLNEMVEKGYLDFKNKDGYY 268
DRF ++++ KN+ G+Y
Sbjct: 561 DRFEAP--EAFEKLIDDDRKGKKNQKGFY 587
>sp|Q07ZP8|FADJ_SHEFN Fatty acid oxidation complex subunit alpha OS=Shewanella
frigidimarina (strain NCIMB 400) GN=fadJ PE=3 SV=1
Length = 710
Score = 132 bits (333), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/147 (47%), Positives = 92/147 (62%), Gaps = 2/147 (1%)
Query: 122 PHLIIGMHYFSPVDKMQLLEIITTEQTSQDTAASAVAVGLKQGKVVITVKDGPGFYTTRI 181
P +IG+HYFSPV+KM L+E+I + TS +T A+ VA KQGK I V+DG GFY RI
Sbjct: 443 PENVIGLHYFSPVEKMPLVEVIAHKTTSPETIATTVAFARKQGKTPIVVQDGAGFYVNRI 502
Query: 182 LSTMLSEAMRILQEGTSPKDLDRLTKQFGFPVGAATLSDEVGIDVGAHIAKDLSKTFGDR 241
L+ ++EA ++L EG + LDR +FGFPVG TL DEVGIDVGA I+ L K GDR
Sbjct: 503 LALYMNEAAQLLLEGQRIEHLDRALVKFGFPVGPMTLLDEVGIDVGAKISPILEKELGDR 562
Query: 242 FSGGNLNVLNEMVEKGYLDFKNKDGYY 268
F ++++ KN G+Y
Sbjct: 563 FKAP--AAFDKLLADDRKGRKNGKGFY 587
>sp|Q8ECP7|FADJ_SHEON Fatty acid oxidation complex subunit alpha OS=Shewanella oneidensis
(strain MR-1) GN=fadJ PE=3 SV=1
Length = 707
Score = 132 bits (331), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/147 (46%), Positives = 93/147 (63%), Gaps = 2/147 (1%)
Query: 122 PHLIIGMHYFSPVDKMQLLEIITTEQTSQDTAASAVAVGLKQGKVVITVKDGPGFYTTRI 181
P +IG+HYFSPV+KM L+E+I +TS +T A+ VA KQGK I V+DG GFY RI
Sbjct: 443 PENVIGLHYFSPVEKMPLVEVIAHAKTSPETIATTVAFARKQGKTPIVVQDGAGFYVNRI 502
Query: 182 LSTMLSEAMRILQEGTSPKDLDRLTKQFGFPVGAATLSDEVGIDVGAHIAKDLSKTFGDR 241
L+ ++EA ++L EG S + LD+ +FGFPVG TL DEVGIDVGA I+ L K G+R
Sbjct: 503 LALYMNEAAQLLLEGQSVEHLDKALVKFGFPVGPITLLDEVGIDVGAKISPILEKELGER 562
Query: 242 FSGGNLNVLNEMVEKGYLDFKNKDGYY 268
F ++++ KN G+Y
Sbjct: 563 FKAP--AAFDKLLSDDRKGRKNGKGFY 587
>sp|A8GH86|FADJ_SERP5 Fatty acid oxidation complex subunit alpha OS=Serratia
proteamaculans (strain 568) GN=fadJ PE=3 SV=2
Length = 715
Score = 131 bits (330), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 77/184 (41%), Positives = 103/184 (55%), Gaps = 5/184 (2%)
Query: 86 QQMSERIYMYTYSERLMGSNGLAMVFPL-QEQIPIQTPHLIIGMHYFSPVDKMQLLEIIT 144
QQM I + + SN ++ P+ Q Q P +IG+HYFSPVDKM L+E+I
Sbjct: 408 QQMVAEIEQHAAPHTIFASNTSSL--PIGQIAAKAQRPEQVIGLHYFSPVDKMPLVEVIP 465
Query: 145 TEQTSQDTAASAVAVGLKQGKVVITVKDGPGFYTTRILSTMLSEAMRILQEGTSPKDLDR 204
TS++T A+ VA+ KQGK I V D GFY RIL+ ++EA R L EG + LD+
Sbjct: 466 HATTSEETIATTVALAHKQGKTAIVVADRAGFYVNRILAPYINEAARCLLEGEPIESLDK 525
Query: 205 LTKQFGFPVGAATLSDEVGIDVGAHIAKDLSKTFGDRFSGGNLNVLNEMVEKGYLDFKNK 264
FGFPVG TL DEVGIDVG I+ L + G RF+ + +++ G KN
Sbjct: 526 ALVDFGFPVGPITLLDEVGIDVGTKISPVLVEQLGPRFAAP--AAFDAVLKDGRKGRKNG 583
Query: 265 DGYY 268
G+Y
Sbjct: 584 RGFY 587
>sp|A6WQ25|FADJ_SHEB8 Fatty acid oxidation complex subunit alpha OS=Shewanella baltica
(strain OS185) GN=fadJ PE=3 SV=1
Length = 706
Score = 131 bits (330), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 69/147 (46%), Positives = 93/147 (63%), Gaps = 2/147 (1%)
Query: 122 PHLIIGMHYFSPVDKMQLLEIITTEQTSQDTAASAVAVGLKQGKVVITVKDGPGFYTTRI 181
P +IG+HYFSPV+KM L+E+I +TS +T A+ VA KQGK I V+DG GFY RI
Sbjct: 441 PENVIGLHYFSPVEKMPLVEVIAHAKTSPETIATTVAFARKQGKTPIVVQDGAGFYVNRI 500
Query: 182 LSTMLSEAMRILQEGTSPKDLDRLTKQFGFPVGAATLSDEVGIDVGAHIAKDLSKTFGDR 241
L+ ++EA ++L EG S + LD+ +FGFPVG TL DEVGIDVGA I+ L K G+R
Sbjct: 501 LALYMNEAAQLLLEGQSVEHLDKALVKFGFPVGPITLLDEVGIDVGAKISPILEKELGER 560
Query: 242 FSGGNLNVLNEMVEKGYLDFKNKDGYY 268
F ++++ KN G+Y
Sbjct: 561 FKAP--AAFDKLLSDDRKGRKNGKGFY 585
>sp|A1RI92|FADJ_SHESW Fatty acid oxidation complex subunit alpha OS=Shewanella sp.
(strain W3-18-1) GN=fadJ PE=3 SV=1
Length = 706
Score = 130 bits (328), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 69/147 (46%), Positives = 93/147 (63%), Gaps = 2/147 (1%)
Query: 122 PHLIIGMHYFSPVDKMQLLEIITTEQTSQDTAASAVAVGLKQGKVVITVKDGPGFYTTRI 181
P +IG+HYFSPV+KM L+E+I +TS +T A+ VA KQGK I V+DG GFY RI
Sbjct: 441 PENVIGLHYFSPVEKMPLVEVIAHAKTSPETIATTVAFARKQGKTPIVVQDGAGFYVNRI 500
Query: 182 LSTMLSEAMRILQEGTSPKDLDRLTKQFGFPVGAATLSDEVGIDVGAHIAKDLSKTFGDR 241
L+ ++EA ++L EG S + LD+ +FGFPVG TL DEVGIDVGA I+ L K G+R
Sbjct: 501 LALYMNEAAQLLLEGQSVEHLDKALVKFGFPVGPITLLDEVGIDVGAKISPILEKELGER 560
Query: 242 FSGGNLNVLNEMVEKGYLDFKNKDGYY 268
F ++++ KN G+Y
Sbjct: 561 FKAP--AAFDKLLGDDRKGRKNGKGFY 585
>sp|A4Y897|FADJ_SHEPC Fatty acid oxidation complex subunit alpha OS=Shewanella
putrefaciens (strain CN-32 / ATCC BAA-453) GN=fadJ PE=3
SV=1
Length = 706
Score = 130 bits (328), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 69/147 (46%), Positives = 93/147 (63%), Gaps = 2/147 (1%)
Query: 122 PHLIIGMHYFSPVDKMQLLEIITTEQTSQDTAASAVAVGLKQGKVVITVKDGPGFYTTRI 181
P +IG+HYFSPV+KM L+E+I +TS +T A+ VA KQGK I V+DG GFY RI
Sbjct: 441 PENVIGLHYFSPVEKMPLVEVIAHAKTSPETIATTVAFARKQGKTPIVVQDGAGFYVNRI 500
Query: 182 LSTMLSEAMRILQEGTSPKDLDRLTKQFGFPVGAATLSDEVGIDVGAHIAKDLSKTFGDR 241
L+ ++EA ++L EG S + LD+ +FGFPVG TL DEVGIDVGA I+ L K G+R
Sbjct: 501 LALYMNEAAQLLLEGQSVEHLDKALVKFGFPVGPITLLDEVGIDVGAKISPILDKELGER 560
Query: 242 FSGGNLNVLNEMVEKGYLDFKNKDGYY 268
F ++++ KN G+Y
Sbjct: 561 FKAP--AAFDKLLGDDRKGRKNGKGFY 585
>sp|A1S7L6|FADJ_SHEAM Fatty acid oxidation complex subunit alpha OS=Shewanella
amazonensis (strain ATCC BAA-1098 / SB2B) GN=fadJ PE=3
SV=1
Length = 706
Score = 130 bits (328), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 69/147 (46%), Positives = 92/147 (62%), Gaps = 2/147 (1%)
Query: 122 PHLIIGMHYFSPVDKMQLLEIITTEQTSQDTAASAVAVGLKQGKVVITVKDGPGFYTTRI 181
P +IG+HYFSPV+KM L+E+I E+TS +T A+ VA KQGK I VKD GFY RI
Sbjct: 441 PENVIGLHYFSPVEKMPLVEVIAHEKTSPETIATTVAFARKQGKTPIVVKDCAGFYVNRI 500
Query: 182 LSTMLSEAMRILQEGTSPKDLDRLTKQFGFPVGAATLSDEVGIDVGAHIAKDLSKTFGDR 241
L+ ++EA ++L EG + LD+ +FGFPVG TL DEVGIDVGA I+ L K G+R
Sbjct: 501 LALYMNEAAQLLLEGQAVDHLDKALVKFGFPVGPMTLLDEVGIDVGAKISPILEKELGER 560
Query: 242 FSGGNLNVLNEMVEKGYLDFKNKDGYY 268
F ++++ KN G+Y
Sbjct: 561 FKAP--AAFDKLMADDRKGRKNGKGFY 585
>sp|A3D684|FADJ_SHEB5 Fatty acid oxidation complex subunit alpha OS=Shewanella baltica
(strain OS155 / ATCC BAA-1091) GN=fadJ PE=3 SV=1
Length = 706
Score = 130 bits (328), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 69/147 (46%), Positives = 93/147 (63%), Gaps = 2/147 (1%)
Query: 122 PHLIIGMHYFSPVDKMQLLEIITTEQTSQDTAASAVAVGLKQGKVVITVKDGPGFYTTRI 181
P +IG+HYFSPV+KM L+E+I +TS +T A+ VA KQGK I V+DG GFY RI
Sbjct: 441 PENVIGLHYFSPVEKMPLVEVIAHAKTSPETIATTVAFARKQGKTPIVVQDGAGFYVNRI 500
Query: 182 LSTMLSEAMRILQEGTSPKDLDRLTKQFGFPVGAATLSDEVGIDVGAHIAKDLSKTFGDR 241
L+ ++EA ++L EG S + LD+ +FGFPVG TL DEVGIDVGA I+ L K G+R
Sbjct: 501 LALYMNEAAQLLLEGQSVEHLDKALVKFGFPVGPITLLDEVGIDVGAKISPILEKELGER 560
Query: 242 FSGGNLNVLNEMVEKGYLDFKNKDGYY 268
F ++++ KN G+Y
Sbjct: 561 FKAP--AAFDKLLGDDRKGRKNGKGFY 585
>sp|Q0HWN3|FADJ_SHESR Fatty acid oxidation complex subunit alpha OS=Shewanella sp.
(strain MR-7) GN=fadJ PE=3 SV=1
Length = 709
Score = 130 bits (327), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 69/147 (46%), Positives = 92/147 (62%), Gaps = 2/147 (1%)
Query: 122 PHLIIGMHYFSPVDKMQLLEIITTEQTSQDTAASAVAVGLKQGKVVITVKDGPGFYTTRI 181
P +IG+HYFSPV+KM L+E+I +TS +T A+ VA KQGK I V+DG GFY RI
Sbjct: 441 PENVIGLHYFSPVEKMPLVEVIAHAKTSPETIATTVAFARKQGKTPIVVQDGAGFYVNRI 500
Query: 182 LSTMLSEAMRILQEGTSPKDLDRLTKQFGFPVGAATLSDEVGIDVGAHIAKDLSKTFGDR 241
L+ ++EA ++L EG S + LD+ +FGFPVG TL DEVGIDVGA IA L G+R
Sbjct: 501 LALYMNEAAQLLLEGQSIEHLDKALVKFGFPVGPITLLDEVGIDVGAKIAPILETELGER 560
Query: 242 FSGGNLNVLNEMVEKGYLDFKNKDGYY 268
F ++++ KN G+Y
Sbjct: 561 FKAP--AAFDKLLSDDRKGRKNGKGFY 585
>sp|A4WCW6|FADJ_ENT38 Fatty acid oxidation complex subunit alpha OS=Enterobacter sp.
(strain 638) GN=fadJ PE=3 SV=1
Length = 715
Score = 127 bits (318), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 104/188 (55%), Gaps = 4/188 (2%)
Query: 82 IQTPQQMSERIYMYTYSERLMGSNGLAMVFPLQE-QIPIQTPHLIIGMHYFSPVDKMQLL 140
+Q QQM + Y + SN ++ P+ + P +IG+H+FSPV+KM L+
Sbjct: 400 LQLKQQMVADVEQYCAPHTIFASNTSSL--PIGDIAANAARPEQVIGLHFFSPVEKMPLV 457
Query: 141 EIITTEQTSQDTAASAVAVGLKQGKVVITVKDGPGFYTTRILSTMLSEAMRILQEGTSPK 200
E+I E TS T A+ V + +QGK I V D GFY RIL+ ++EAMR+L EG +
Sbjct: 458 EVIPHESTSAQTVATVVKLAKRQGKTPIVVADKAGFYVNRILAPYINEAMRLLTEGEKVE 517
Query: 201 DLDRLTKQFGFPVGAATLSDEVGIDVGAHIAKDLSKTFGDRFSGGNLNVLNEMVEKGYLD 260
++D +FGFPVG L DEVGID G I L +G+RFS NV++ ++
Sbjct: 518 NVDDALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGERFS-PPANVVSAILNDDRKG 576
Query: 261 FKNKDGYY 268
KN G+Y
Sbjct: 577 RKNGRGFY 584
>sp|A1JK30|FADJ_YERE8 Fatty acid oxidation complex subunit alpha OS=Yersinia
enterocolitica serotype O:8 / biotype 1B (strain 8081)
GN=fadJ PE=3 SV=2
Length = 745
Score = 127 bits (318), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/184 (40%), Positives = 102/184 (55%), Gaps = 5/184 (2%)
Query: 86 QQMSERIYMYTYSERLMGSNGLAMVFPLQE-QIPIQTPHLIIGMHYFSPVDKMQLLEIIT 144
QQM I + + SN ++ P+ + Q P +IG+HYFSPVDKM L+E+I
Sbjct: 423 QQMVADIEHFAAPHTIFASNTSSL--PISDIAAQAQRPEQVIGLHYFSPVDKMPLVEVIP 480
Query: 145 TEQTSQDTAASAVAVGLKQGKVVITVKDGPGFYTTRILSTMLSEAMRILQEGTSPKDLDR 204
+TS++T A+ VA+ KQGK I V D GFY RIL+ ++EA R L +G +D+
Sbjct: 481 HAKTSEETIATTVALARKQGKTAIVVADRAGFYVNRILAPYINEAARCLLDGEPIASVDK 540
Query: 205 LTKQFGFPVGAATLSDEVGIDVGAHIAKDLSKTFGDRFSGGNLNVLNEMVEKGYLDFKNK 264
FGFPVG TL DEVGIDVG I L + G RF+ + +++ G KN
Sbjct: 541 ALVDFGFPVGPITLLDEVGIDVGTKIIPILVEKLGARFAAP--PSFDVILKDGRKGRKNG 598
Query: 265 DGYY 268
G+Y
Sbjct: 599 RGFY 602
>sp|Q6D2L7|FADJ_ERWCT Fatty acid oxidation complex subunit alpha OS=Erwinia carotovora
subsp. atroseptica (strain SCRI 1043 / ATCC BAA-672)
GN=fadJ PE=3 SV=1
Length = 731
Score = 126 bits (317), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 66/149 (44%), Positives = 89/149 (59%), Gaps = 2/149 (1%)
Query: 120 QTPHLIIGMHYFSPVDKMQLLEIITTEQTSQDTAASAVAVGLKQGKVVITVKDGPGFYTT 179
+ P L++G+HYFSPVDKM L+E+I TS +T A+ VA+ KQGK I V D GFY
Sbjct: 451 RRPQLVVGLHYFSPVDKMPLVEVIPHAHTSAETVATTVALARKQGKTAIVVGDSAGFYVN 510
Query: 180 RILSTMLSEAMRILQEGTSPKDLDRLTKQFGFPVGAATLSDEVGIDVGAHIAKDLSKTFG 239
RIL+ ++EA L EG + +D +FGFPVG L DEVGIDV I LS+ G
Sbjct: 511 RILAPYINEAAYCLLEGEPIESIDYALVRFGFPVGPLALLDEVGIDVATKIVPVLSEELG 570
Query: 240 DRFSGGNLNVLNEMVEKGYLDFKNKDGYY 268
DRF+ + + +++ G KN G+Y
Sbjct: 571 DRFT--SPPAFDAILKDGRKGRKNGKGFY 597
>sp|A4TM82|FADJ_YERPP Fatty acid oxidation complex subunit alpha OS=Yersinia pestis
(strain Pestoides F) GN=fadJ PE=3 SV=1
Length = 774
Score = 125 bits (313), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 103/184 (55%), Gaps = 5/184 (2%)
Query: 86 QQMSERIYMYTYSERLMGSNGLAMVFPLQEQIPI-QTPHLIIGMHYFSPVDKMQLLEIIT 144
QQM I + + + SN ++ P+ + + Q P +IG+HYFSPVDKM L+E+I
Sbjct: 438 QQMVADIERFGAAHTIFASNTSSL--PISQIAALAQRPEQVIGLHYFSPVDKMPLVEVIP 495
Query: 145 TEQTSQDTAASAVAVGLKQGKVVITVKDGPGFYTTRILSTMLSEAMRILQEGTSPKDLDR 204
E+TS++T A+ VA+ KQGK I V D GFY RIL+ ++EA R L +G + +D
Sbjct: 496 HEKTSEETIATTVALARKQGKTAIVVADRAGFYVNRILAPYINEAARCLLDGEPIESVDN 555
Query: 205 LTKQFGFPVGAATLSDEVGIDVGAHIAKDLSKTFGDRFSGGNLNVLNEMVEKGYLDFKNK 264
FGFPVG L DEVGIDV I L + G RF+ + +++ G KN
Sbjct: 556 ALVDFGFPVGPMMLLDEVGIDVATKIMPILVEQLGPRFAAP--PSFDVILKDGRKGRKNG 613
Query: 265 DGYY 268
G+Y
Sbjct: 614 RGFY 617
>sp|Q5E3U1|FADJ_VIBF1 Fatty acid oxidation complex subunit alpha OS=Vibrio fischeri
(strain ATCC 700601 / ES114) GN=fadJ PE=3 SV=2
Length = 687
Score = 125 bits (313), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 66/149 (44%), Positives = 90/149 (60%), Gaps = 2/149 (1%)
Query: 120 QTPHLIIGMHYFSPVDKMQLLEIITTEQTSQDTAASAVAVGLKQGKVVITVKDGPGFYTT 179
Q P I+G+HYFSPV+KM L+E+I TS +T ++ VA+ +QGK I VKD GFY
Sbjct: 438 QKPENIVGLHYFSPVEKMPLVEVIPHATTSDETISTVVALAKQQGKTPIVVKDSAGFYVN 497
Query: 180 RILSTMLSEAMRILQEGTSPKDLDRLTKQFGFPVGAATLSDEVGIDVGAHIAKDLSKTFG 239
RIL+ ++EA R+L G + LD FGFPVG +L DEVG+D+GA I L G
Sbjct: 498 RILAPYMNEAARLLLAGEPIEVLDEALLDFGFPVGPISLLDEVGVDIGAKIMPILEAELG 557
Query: 240 DRFSGGNLNVLNEMVEKGYLDFKNKDGYY 268
DRF + +V +++ L K K G+Y
Sbjct: 558 DRFR--SPDVFQTLIDDKRLGKKTKRGFY 584
>sp|Q668V1|FADJ_YERPS Fatty acid oxidation complex subunit alpha OS=Yersinia
pseudotuberculosis serotype I (strain IP32953) GN=fadJ
PE=3 SV=2
Length = 753
Score = 125 bits (313), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 103/184 (55%), Gaps = 5/184 (2%)
Query: 86 QQMSERIYMYTYSERLMGSNGLAMVFPLQEQIPI-QTPHLIIGMHYFSPVDKMQLLEIIT 144
QQM I + + + SN ++ P+ + + Q P +IG+HYFSPVDKM L+E+I
Sbjct: 411 QQMVADIERFGAAHTIFASNTSSL--PISQIAALAQRPEQVIGLHYFSPVDKMPLVEVIP 468
Query: 145 TEQTSQDTAASAVAVGLKQGKVVITVKDGPGFYTTRILSTMLSEAMRILQEGTSPKDLDR 204
E+TS++T A+ VA+ KQGK I V D GFY RIL+ ++EA R L +G + +D
Sbjct: 469 HEKTSEETIATTVALARKQGKTAIVVADRAGFYVNRILAPYINEAARCLLDGEPIESVDN 528
Query: 205 LTKQFGFPVGAATLSDEVGIDVGAHIAKDLSKTFGDRFSGGNLNVLNEMVEKGYLDFKNK 264
FGFPVG L DEVGIDV I L + G RF+ + +++ G KN
Sbjct: 529 ALVDFGFPVGPMMLLDEVGIDVATKIMPILVEQLGPRFAAP--PSFDVILKDGRKGRKNG 586
Query: 265 DGYY 268
G+Y
Sbjct: 587 RGFY 590
>sp|Q1CHK2|FADJ_YERPN Fatty acid oxidation complex subunit alpha OS=Yersinia pestis bv.
Antiqua (strain Nepal516) GN=fadJ PE=3 SV=2
Length = 747
Score = 125 bits (313), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 103/184 (55%), Gaps = 5/184 (2%)
Query: 86 QQMSERIYMYTYSERLMGSNGLAMVFPLQEQIPI-QTPHLIIGMHYFSPVDKMQLLEIIT 144
QQM I + + + SN ++ P+ + + Q P +IG+HYFSPVDKM L+E+I
Sbjct: 411 QQMVADIERFGAAHTIFASNTSSL--PISQIAALAQRPEQVIGLHYFSPVDKMPLVEVIP 468
Query: 145 TEQTSQDTAASAVAVGLKQGKVVITVKDGPGFYTTRILSTMLSEAMRILQEGTSPKDLDR 204
E+TS++T A+ VA+ KQGK I V D GFY RIL+ ++EA R L +G + +D
Sbjct: 469 HEKTSEETIATTVALARKQGKTAIVVADRAGFYVNRILAPYINEAARCLLDGEPIESVDN 528
Query: 205 LTKQFGFPVGAATLSDEVGIDVGAHIAKDLSKTFGDRFSGGNLNVLNEMVEKGYLDFKNK 264
FGFPVG L DEVGIDV I L + G RF+ + +++ G KN
Sbjct: 529 ALVDFGFPVGPMMLLDEVGIDVATKIMPILVEQLGPRFAAP--PSFDVILKDGRKGRKNG 586
Query: 265 DGYY 268
G+Y
Sbjct: 587 RGFY 590
>sp|Q8ZD45|FADJ_YERPE Fatty acid oxidation complex subunit alpha OS=Yersinia pestis
GN=fadJ PE=3 SV=2
Length = 747
Score = 125 bits (313), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 103/184 (55%), Gaps = 5/184 (2%)
Query: 86 QQMSERIYMYTYSERLMGSNGLAMVFPLQEQIPI-QTPHLIIGMHYFSPVDKMQLLEIIT 144
QQM I + + + SN ++ P+ + + Q P +IG+HYFSPVDKM L+E+I
Sbjct: 411 QQMVADIERFGAAHTIFASNTSSL--PISQIAALAQRPEQVIGLHYFSPVDKMPLVEVIP 468
Query: 145 TEQTSQDTAASAVAVGLKQGKVVITVKDGPGFYTTRILSTMLSEAMRILQEGTSPKDLDR 204
E+TS++T A+ VA+ KQGK I V D GFY RIL+ ++EA R L +G + +D
Sbjct: 469 HEKTSEETIATTVALARKQGKTAIVVADRAGFYVNRILAPYINEAARCLLDGEPIESVDN 528
Query: 205 LTKQFGFPVGAATLSDEVGIDVGAHIAKDLSKTFGDRFSGGNLNVLNEMVEKGYLDFKNK 264
FGFPVG L DEVGIDV I L + G RF+ + +++ G KN
Sbjct: 529 ALVDFGFPVGPMMLLDEVGIDVATKIMPILVEQLGPRFAAP--PSFDVILKDGRKGRKNG 586
Query: 265 DGYY 268
G+Y
Sbjct: 587 RGFY 590
>sp|Q1C660|FADJ_YERPA Fatty acid oxidation complex subunit alpha OS=Yersinia pestis bv.
Antiqua (strain Antiqua) GN=fadJ PE=3 SV=2
Length = 747
Score = 125 bits (313), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 103/184 (55%), Gaps = 5/184 (2%)
Query: 86 QQMSERIYMYTYSERLMGSNGLAMVFPLQEQIPI-QTPHLIIGMHYFSPVDKMQLLEIIT 144
QQM I + + + SN ++ P+ + + Q P +IG+HYFSPVDKM L+E+I
Sbjct: 411 QQMVADIERFGAAHTIFASNTSSL--PISQIAALAQRPEQVIGLHYFSPVDKMPLVEVIP 468
Query: 145 TEQTSQDTAASAVAVGLKQGKVVITVKDGPGFYTTRILSTMLSEAMRILQEGTSPKDLDR 204
E+TS++T A+ VA+ KQGK I V D GFY RIL+ ++EA R L +G + +D
Sbjct: 469 HEKTSEETIATTVALARKQGKTAIVVADRAGFYVNRILAPYINEAARCLLDGEPIESVDN 528
Query: 205 LTKQFGFPVGAATLSDEVGIDVGAHIAKDLSKTFGDRFSGGNLNVLNEMVEKGYLDFKNK 264
FGFPVG L DEVGIDV I L + G RF+ + +++ G KN
Sbjct: 529 ALVDFGFPVGPMMLLDEVGIDVATKIMPILVEQLGPRFAAP--PSFDVILKDGRKGRKNG 586
Query: 265 DGYY 268
G+Y
Sbjct: 587 RGFY 590
>sp|A7FGK1|FADJ_YERP3 Fatty acid oxidation complex subunit alpha OS=Yersinia
pseudotuberculosis serotype O:1b (strain IP 31758)
GN=fadJ PE=3 SV=1
Length = 747
Score = 125 bits (313), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 103/184 (55%), Gaps = 5/184 (2%)
Query: 86 QQMSERIYMYTYSERLMGSNGLAMVFPLQEQIPI-QTPHLIIGMHYFSPVDKMQLLEIIT 144
QQM I + + + SN ++ P+ + + Q P +IG+HYFSPVDKM L+E+I
Sbjct: 411 QQMVADIERFGAAHTIFASNTSSL--PISQIAALAQRPEQVIGLHYFSPVDKMPLVEVIP 468
Query: 145 TEQTSQDTAASAVAVGLKQGKVVITVKDGPGFYTTRILSTMLSEAMRILQEGTSPKDLDR 204
E+TS++T A+ VA+ KQGK I V D GFY RIL+ ++EA R L +G + +D
Sbjct: 469 HEKTSEETIATTVALARKQGKTAIVVADRAGFYVNRILAPYINEAARCLLDGEPIESVDN 528
Query: 205 LTKQFGFPVGAATLSDEVGIDVGAHIAKDLSKTFGDRFSGGNLNVLNEMVEKGYLDFKNK 264
FGFPVG L DEVGIDV I L + G RF+ + +++ G KN
Sbjct: 529 ALVDFGFPVGPMMLLDEVGIDVATKIMPILVEQLGPRFAAP--PSFDVILKDGRKGRKNG 586
Query: 265 DGYY 268
G+Y
Sbjct: 587 RGFY 590
>sp|Q87MM3|FADJ_VIBPA Fatty acid oxidation complex subunit alpha OS=Vibrio
parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
GN=fadJ PE=3 SV=1
Length = 703
Score = 124 bits (312), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 74/184 (40%), Positives = 104/184 (56%), Gaps = 5/184 (2%)
Query: 86 QQMSERIYMYTYSERLMGSNGLAM-VFPLQEQIPIQTPHLIIGMHYFSPVDKMQLLEIIT 144
QQM I SE + +N ++ + + E+ + P I+G+HYFSPV+KM L+E+I
Sbjct: 406 QQMVADIEANAKSETIFATNTSSLPIHKIAEKA--ERPENIVGLHYFSPVEKMPLVEVIP 463
Query: 145 TEQTSQDTAASAVAVGLKQGKVVITVKDGPGFYTTRILSTMLSEAMRILQEGTSPKDLDR 204
E TS +T ++ VA+ KQGK I VKD GFY RIL+ ++EA IL + LD
Sbjct: 464 HETTSDETISTVVALAKKQGKTPIVVKDKAGFYVNRILAPYMNEAAHILLANEPIEKLDG 523
Query: 205 LTKQFGFPVGAATLSDEVGIDVGAHIAKDLSKTFGDRFSGGNLNVLNEMVEKGYLDFKNK 264
FGFPVG TL DEVG+D+GA I L G+RF G +V + ++ G K+
Sbjct: 524 ALLDFGFPVGPITLLDEVGVDIGAKIMPILVNELGERFKGP--DVFDILLNDGRKGRKSG 581
Query: 265 DGYY 268
G+Y
Sbjct: 582 KGFY 585
>sp|B7LBJ5|FADJ_ECO55 Fatty acid oxidation complex subunit alpha OS=Escherichia coli
(strain 55989 / EAEC) GN=fadJ PE=3 SV=1
Length = 714
Score = 124 bits (310), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 106/188 (56%), Gaps = 4/188 (2%)
Query: 82 IQTPQQMSERIYMYTYSERLMGSNGLAMVFPLQEQIPIQT-PHLIIGMHYFSPVDKMQLL 140
++ QQM + + + + SN ++ P+ + T P +IG+H+FSPV+KM L+
Sbjct: 400 LELKQQMVAEVEQNSAAHTIFASNTSSL--PIGDIAAHATRPEQVIGLHFFSPVEKMPLV 457
Query: 141 EIITTEQTSQDTAASAVAVGLKQGKVVITVKDGPGFYTTRILSTMLSEAMRILQEGTSPK 200
EII TS T A+ V + KQGK I V+D GFY RIL+ ++EA+R+L EG +
Sbjct: 458 EIIPHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVE 517
Query: 201 DLDRLTKQFGFPVGAATLSDEVGIDVGAHIAKDLSKTFGDRFSGGNLNVLNEMVEKGYLD 260
+D + +FGFPVG L DEVGID G I L +G+RFS NV++ ++
Sbjct: 518 HIDAVLVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGERFS-APANVVSSILNDDRKG 576
Query: 261 FKNKDGYY 268
KN G+Y
Sbjct: 577 RKNGRGFY 584
>sp|B7NP24|FADJ_ECO7I Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O7:K1 (strain IAI39 / ExPEC) GN=fadJ PE=3 SV=1
Length = 714
Score = 123 bits (308), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/147 (44%), Positives = 88/147 (59%), Gaps = 1/147 (0%)
Query: 122 PHLIIGMHYFSPVDKMQLLEIITTEQTSQDTAASAVAVGLKQGKVVITVKDGPGFYTTRI 181
P +IG+H+FSPV+KM L+EII TS T A+ V + KQGK I V+D GFY RI
Sbjct: 439 PEQVIGLHFFSPVEKMPLVEIIPHASTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRI 498
Query: 182 LSTMLSEAMRILQEGTSPKDLDRLTKQFGFPVGAATLSDEVGIDVGAHIAKDLSKTFGDR 241
L+ ++EA+R+L EG + +D +FGFPVG L DEVGID G I L +G+R
Sbjct: 499 LAPYINEAIRMLTEGERIEHIDAALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER 558
Query: 242 FSGGNLNVLNEMVEKGYLDFKNKDGYY 268
FS NV++ ++ KN G+Y
Sbjct: 559 FS-APANVVSSILNDDRKGRKNGRGFY 584
>sp|B7UFZ8|FADJ_ECO27 Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O127:H6 (strain E2348/69 / EPEC) GN=fadJ PE=3 SV=1
Length = 714
Score = 123 bits (308), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/147 (44%), Positives = 88/147 (59%), Gaps = 1/147 (0%)
Query: 122 PHLIIGMHYFSPVDKMQLLEIITTEQTSQDTAASAVAVGLKQGKVVITVKDGPGFYTTRI 181
P +IG+H+FSPV+KM L+EII TS T A+ V + KQGK I V+D GFY RI
Sbjct: 439 PEQVIGLHFFSPVEKMPLVEIIPHASTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRI 498
Query: 182 LSTMLSEAMRILQEGTSPKDLDRLTKQFGFPVGAATLSDEVGIDVGAHIAKDLSKTFGDR 241
L+ ++EA+R+L EG + +D +FGFPVG L DEVGID G I L +G+R
Sbjct: 499 LAPYINEAIRMLTEGERIEHIDAALVKFGFPVGPIQLLDEVGIDTGTKIMPVLEAAYGER 558
Query: 242 FSGGNLNVLNEMVEKGYLDFKNKDGYY 268
FS NV++ ++ KN G+Y
Sbjct: 559 FS-APANVVSSILNDDRKGRKNGRGFY 584
>sp|Q0TFA6|FADJ_ECOL5 Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O6:K15:H31 (strain 536 / UPEC) GN=fadJ PE=3 SV=1
Length = 714
Score = 123 bits (308), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/147 (44%), Positives = 88/147 (59%), Gaps = 1/147 (0%)
Query: 122 PHLIIGMHYFSPVDKMQLLEIITTEQTSQDTAASAVAVGLKQGKVVITVKDGPGFYTTRI 181
P +IG+H+FSPV+KM L+EII TS T A+ V + KQGK I V+D GFY RI
Sbjct: 439 PEQVIGLHFFSPVEKMPLVEIIPHASTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRI 498
Query: 182 LSTMLSEAMRILQEGTSPKDLDRLTKQFGFPVGAATLSDEVGIDVGAHIAKDLSKTFGDR 241
L+ ++EA+R+L EG + +D +FGFPVG L DEVGID G I L +G+R
Sbjct: 499 LAPYINEAIRMLTEGERIEHIDTALVKFGFPVGPIQLLDEVGIDTGTKIMPVLEAAYGER 558
Query: 242 FSGGNLNVLNEMVEKGYLDFKNKDGYY 268
FS NV++ ++ KN G+Y
Sbjct: 559 FS-APANVVSSILNDDRKGRKNGRGFY 584
>sp|B7MY16|FADJ_ECO81 Fatty acid oxidation complex subunit alpha OS=Escherichia coli O81
(strain ED1a) GN=fadJ PE=3 SV=1
Length = 714
Score = 123 bits (308), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/147 (44%), Positives = 88/147 (59%), Gaps = 1/147 (0%)
Query: 122 PHLIIGMHYFSPVDKMQLLEIITTEQTSQDTAASAVAVGLKQGKVVITVKDGPGFYTTRI 181
P +IG+H+FSPV+KM L+EII TS T A+ V + KQGK I V+D GFY RI
Sbjct: 439 PEQVIGLHFFSPVEKMPLVEIIPHASTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRI 498
Query: 182 LSTMLSEAMRILQEGTSPKDLDRLTKQFGFPVGAATLSDEVGIDVGAHIAKDLSKTFGDR 241
L+ ++EA+R+L EG + +D +FGFPVG L DEVGID G I L +G+R
Sbjct: 499 LAPYINEAIRMLTEGERIEHIDAALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER 558
Query: 242 FSGGNLNVLNEMVEKGYLDFKNKDGYY 268
FS NV++ ++ KN G+Y
Sbjct: 559 FS-APANVVSSILNDDRKGRKNGRGFY 584
>sp|Q1R972|FADJ_ECOUT Fatty acid oxidation complex subunit alpha OS=Escherichia coli
(strain UTI89 / UPEC) GN=fadJ PE=3 SV=1
Length = 714
Score = 123 bits (308), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/147 (44%), Positives = 88/147 (59%), Gaps = 1/147 (0%)
Query: 122 PHLIIGMHYFSPVDKMQLLEIITTEQTSQDTAASAVAVGLKQGKVVITVKDGPGFYTTRI 181
P +IG+H+FSPV+KM L+EII TS T A+ V + KQGK I V+D GFY RI
Sbjct: 439 PEQVIGLHFFSPVEKMPLVEIIPHASTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRI 498
Query: 182 LSTMLSEAMRILQEGTSPKDLDRLTKQFGFPVGAATLSDEVGIDVGAHIAKDLSKTFGDR 241
L+ ++EA+R+L EG + +D +FGFPVG L DEVGID G I L +G+R
Sbjct: 499 LAPYINEAIRMLTEGERIEHIDAALVKFGFPVGPIQLLDEVGIDTGTKIMPVLEAAYGER 558
Query: 242 FSGGNLNVLNEMVEKGYLDFKNKDGYY 268
FS NV++ ++ KN G+Y
Sbjct: 559 FS-APANVVSSILNDDRKGRKNGRGFY 584
>sp|A1ADI8|FADJ_ECOK1 Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O1:K1 / APEC GN=fadJ PE=3 SV=1
Length = 714
Score = 123 bits (308), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/147 (44%), Positives = 88/147 (59%), Gaps = 1/147 (0%)
Query: 122 PHLIIGMHYFSPVDKMQLLEIITTEQTSQDTAASAVAVGLKQGKVVITVKDGPGFYTTRI 181
P +IG+H+FSPV+KM L+EII TS T A+ V + KQGK I V+D GFY RI
Sbjct: 439 PEQVIGLHFFSPVEKMPLVEIIPHASTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRI 498
Query: 182 LSTMLSEAMRILQEGTSPKDLDRLTKQFGFPVGAATLSDEVGIDVGAHIAKDLSKTFGDR 241
L+ ++EA+R+L EG + +D +FGFPVG L DEVGID G I L +G+R
Sbjct: 499 LAPYINEAIRMLTEGERIEHIDAALVKFGFPVGPIQLLDEVGIDTGTKIMPVLEAAYGER 558
Query: 242 FSGGNLNVLNEMVEKGYLDFKNKDGYY 268
FS NV++ ++ KN G+Y
Sbjct: 559 FS-APANVVSSILNDDRKGRKNGRGFY 584
>sp|B7MGV7|FADJ_ECO45 Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O45:K1 (strain S88 / ExPEC) GN=fadJ PE=3 SV=1
Length = 714
Score = 123 bits (308), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/147 (44%), Positives = 88/147 (59%), Gaps = 1/147 (0%)
Query: 122 PHLIIGMHYFSPVDKMQLLEIITTEQTSQDTAASAVAVGLKQGKVVITVKDGPGFYTTRI 181
P +IG+H+FSPV+KM L+EII TS T A+ V + KQGK I V+D GFY RI
Sbjct: 439 PEQVIGLHFFSPVEKMPLVEIIPHASTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRI 498
Query: 182 LSTMLSEAMRILQEGTSPKDLDRLTKQFGFPVGAATLSDEVGIDVGAHIAKDLSKTFGDR 241
L+ ++EA+R+L EG + +D +FGFPVG L DEVGID G I L +G+R
Sbjct: 499 LAPYINEAIRMLTEGERIEHIDAALVKFGFPVGPIQLLDEVGIDTGTKIMPVLEAAYGER 558
Query: 242 FSGGNLNVLNEMVEKGYLDFKNKDGYY 268
FS NV++ ++ KN G+Y
Sbjct: 559 FS-APANVVSSILNDDRKGRKNGRGFY 584
>sp|Q9KT58|FADJ_VIBCH Fatty acid oxidation complex subunit alpha OS=Vibrio cholerae
serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
GN=fadJ PE=3 SV=2
Length = 708
Score = 123 bits (308), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/150 (46%), Positives = 91/150 (60%), Gaps = 4/150 (2%)
Query: 120 QTPHLIIGMHYFSPVDKMQLLEIITTEQTSQDTAASAVAVGLKQGKVVITVKDGPGFYTT 179
Q P I+G+HYFSPV+KM L+E+I TS +T A+ V + KQGK I VKD GFY
Sbjct: 442 QRPQNIVGLHYFSPVEKMPLVEVIPHATTSDETIATVVTLARKQGKTPIVVKDCAGFYVN 501
Query: 180 RILSTMLSEAMRILQEGTSPKDLDRLTKQFGFPVGAATLSDEVGIDVGAHIAKDLSKTFG 239
RIL+ ++EA ++L G + LD FGFPVG TL DEVG+D+GA I L K G
Sbjct: 502 RILAPYMNEAAQVLMAGEPIEKLDAALLDFGFPVGPITLLDEVGVDIGAKIMPILVKELG 561
Query: 240 DRFSGGNL-NVLNEMVEKGYLDFKNKDGYY 268
RF G ++ +VL + KG K+ G+Y
Sbjct: 562 PRFQGPDVFDVLLKDNRKGR---KSGKGFY 588
>sp|B5XVW2|FADJ_KLEP3 Fatty acid oxidation complex subunit alpha OS=Klebsiella pneumoniae
(strain 342) GN=fadJ PE=3 SV=1
Length = 714
Score = 123 bits (308), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/184 (36%), Positives = 104/184 (56%), Gaps = 4/184 (2%)
Query: 86 QQMSERIYMYTYSERLMGSNGLAMVFPLQE-QIPIQTPHLIIGMHYFSPVDKMQLLEIIT 144
Q+M + Y + + SN ++ P+ + + P +IG+H+FSPV+KM L+E+I
Sbjct: 404 QRMVSEVEQYCGPQTIFASNTSSL--PIGDIAAQARRPGRVIGLHFFSPVEKMPLVEVIP 461
Query: 145 TEQTSQDTAASAVAVGLKQGKVVITVKDGPGFYTTRILSTMLSEAMRILQEGTSPKDLDR 204
+ T A+ V + +QGK I V D GFY RIL+ ++EAMR+L EG +++D+
Sbjct: 462 HKGTDPQAIATVVQLAKRQGKTPIVVADKAGFYVNRILAPYINEAMRLLVEGEPVEEIDK 521
Query: 205 LTKQFGFPVGAATLSDEVGIDVGAHIAKDLSKTFGDRFSGGNLNVLNEMVEKGYLDFKNK 264
+FGFPVG L DEVGID G I L FG+RFS N+++ +++ KN
Sbjct: 522 ALVKFGFPVGPIQLLDEVGIDTGTKIIPVLESAFGERFS-SPANIIDAILKDDRKGRKNN 580
Query: 265 DGYY 268
G+Y
Sbjct: 581 RGFY 584
>sp|B7M6M2|FADJ_ECO8A Fatty acid oxidation complex subunit alpha OS=Escherichia coli O8
(strain IAI1) GN=fadJ PE=3 SV=1
Length = 714
Score = 123 bits (308), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 105/188 (55%), Gaps = 4/188 (2%)
Query: 82 IQTPQQMSERIYMYTYSERLMGSNGLAMVFPLQEQIPIQT-PHLIIGMHYFSPVDKMQLL 140
++ QQM + + + + SN ++ P+ + T P +IG+H+FSPV+KM L+
Sbjct: 400 LELKQQMVAEVEQNSAAHTIFASNTSSL--PIGDIAAHATRPEQVIGLHFFSPVEKMPLV 457
Query: 141 EIITTEQTSQDTAASAVAVGLKQGKVVITVKDGPGFYTTRILSTMLSEAMRILQEGTSPK 200
EII TS T A+ V + KQGK I V+D GFY RIL+ ++EA+R+L EG +
Sbjct: 458 EIIPHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVE 517
Query: 201 DLDRLTKQFGFPVGAATLSDEVGIDVGAHIAKDLSKTFGDRFSGGNLNVLNEMVEKGYLD 260
+D +FGFPVG L DEVGID G I L +G+RFS NV++ ++
Sbjct: 518 HIDAALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGERFS-APANVVSSILNDDRKG 576
Query: 261 FKNKDGYY 268
KN G+Y
Sbjct: 577 RKNGRGFY 584
>sp|A5F2P2|FADJ_VIBC3 Fatty acid oxidation complex subunit alpha OS=Vibrio cholerae
serotype O1 (strain ATCC 39541 / Ogawa 395 / O395)
GN=fadJ PE=3 SV=1
Length = 708
Score = 123 bits (308), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/150 (46%), Positives = 91/150 (60%), Gaps = 4/150 (2%)
Query: 120 QTPHLIIGMHYFSPVDKMQLLEIITTEQTSQDTAASAVAVGLKQGKVVITVKDGPGFYTT 179
Q P I+G+HYFSPV+KM L+E+I TS +T A+ V + KQGK I VKD GFY
Sbjct: 442 QRPQNIVGLHYFSPVEKMPLVEVIPHATTSDETIATVVTLARKQGKTPIVVKDCAGFYVN 501
Query: 180 RILSTMLSEAMRILQEGTSPKDLDRLTKQFGFPVGAATLSDEVGIDVGAHIAKDLSKTFG 239
RIL+ ++EA ++L G + LD FGFPVG TL DEVG+D+GA I L K G
Sbjct: 502 RILAPYMNEAAQVLMAGEPIEKLDAALLDFGFPVGPITLLDEVGVDIGAKIMPILVKELG 561
Query: 240 DRFSGGNL-NVLNEMVEKGYLDFKNKDGYY 268
RF G ++ +VL + KG K+ G+Y
Sbjct: 562 PRFQGPDVFDVLLKDNRKGR---KSGKGFY 588
>sp|B1LME7|FADJ_ECOSM Fatty acid oxidation complex subunit alpha OS=Escherichia coli
(strain SMS-3-5 / SECEC) GN=fadJ PE=3 SV=1
Length = 714
Score = 123 bits (308), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/147 (44%), Positives = 88/147 (59%), Gaps = 1/147 (0%)
Query: 122 PHLIIGMHYFSPVDKMQLLEIITTEQTSQDTAASAVAVGLKQGKVVITVKDGPGFYTTRI 181
P +IG+H+FSPV+KM L+EII TS T A+ V + KQGK I V+D GFY RI
Sbjct: 439 PEQVIGLHFFSPVEKMPLVEIIPHASTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRI 498
Query: 182 LSTMLSEAMRILQEGTSPKDLDRLTKQFGFPVGAATLSDEVGIDVGAHIAKDLSKTFGDR 241
L+ ++EA+R+L EG + +D +FGFPVG L DEVGID G I L +G+R
Sbjct: 499 LAPYINEAIRMLTEGERIEHIDAALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER 558
Query: 242 FSGGNLNVLNEMVEKGYLDFKNKDGYY 268
FS NV++ ++ KN G+Y
Sbjct: 559 FS-APANVVSSILNDDRKGRKNGRGFY 584
>sp|A7MS61|FADJ_VIBHB Fatty acid oxidation complex subunit alpha OS=Vibrio harveyi
(strain ATCC BAA-1116 / BB120) GN=fadJ PE=3 SV=1
Length = 704
Score = 122 bits (307), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/149 (44%), Positives = 89/149 (59%), Gaps = 2/149 (1%)
Query: 120 QTPHLIIGMHYFSPVDKMQLLEIITTEQTSQDTAASAVAVGLKQGKVVITVKDGPGFYTT 179
+ P I+G+HYFSPV+KM L+E+I E TS++T ++ VA+ KQGK I VKD GFY
Sbjct: 439 ERPENIVGLHYFSPVEKMPLVEVIPHETTSEETISTVVALAKKQGKTPIVVKDKAGFYVN 498
Query: 180 RILSTMLSEAMRILQEGTSPKDLDRLTKQFGFPVGAATLSDEVGIDVGAHIAKDLSKTFG 239
RIL+ ++EA IL + LD FGFPVG TL DEVG+D+GA I L G
Sbjct: 499 RILAPYMNEAAHILLANEPIEQLDGALLDFGFPVGPITLLDEVGVDIGAKIMPILVNELG 558
Query: 240 DRFSGGNLNVLNEMVEKGYLDFKNKDGYY 268
+RF G +V + ++ G K G+Y
Sbjct: 559 ERFKGP--DVFDTLLNDGRKGRKTGKGFY 585
>sp|A7MH81|FADJ_CROS8 Fatty acid oxidation complex subunit alpha OS=Cronobacter sakazakii
(strain ATCC BAA-894) GN=fadJ PE=3 SV=1
Length = 717
Score = 122 bits (307), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/184 (40%), Positives = 100/184 (54%), Gaps = 4/184 (2%)
Query: 86 QQMSERIYMYTYSERLMGSNGLAMVFPLQEQIPIQT-PHLIIGMHYFSPVDKMQLLEIIT 144
Q M I +T + SN ++ P+ + T P +IG+HYFSPVDKM L+E+I
Sbjct: 404 QNMVAEIEAHTAPHTIFASNTSSL--PIGDIAAGATRPEQVIGLHYFSPVDKMPLVEVIP 461
Query: 145 TEQTSQDTAASAVAVGLKQGKVVITVKDGPGFYTTRILSTMLSEAMRILQEGTSPKDLDR 204
TS +T A+ V + KQGK I V D GFY RIL+ ++EAMR L EG S + +D
Sbjct: 462 HAGTSAETIATTVQLAKKQGKTPIVVADCAGFYVNRILAPYINEAMRCLMEGESIEKIDE 521
Query: 205 LTKQFGFPVGAATLSDEVGIDVGAHIAKDLSKTFGDRFSGGNLNVLNEMVEKGYLDFKNK 264
+ GFPVG L DEVGIDVG I L + +G RFS + + ++ KN
Sbjct: 522 ALVKRGFPVGPIQLLDEVGIDVGTKIMPVLERAYGPRFSAPG-DAVAAILNDDRKGRKNG 580
Query: 265 DGYY 268
G+Y
Sbjct: 581 RGFY 584
>sp|Q32DJ4|FADJ_SHIDS Fatty acid oxidation complex subunit alpha OS=Shigella dysenteriae
serotype 1 (strain Sd197) GN=fadJ PE=3 SV=1
Length = 714
Score = 122 bits (307), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/147 (44%), Positives = 88/147 (59%), Gaps = 1/147 (0%)
Query: 122 PHLIIGMHYFSPVDKMQLLEIITTEQTSQDTAASAVAVGLKQGKVVITVKDGPGFYTTRI 181
P +IG+H+FSPV+KM L+EII TS T A+ V + KQGK I V+D GFY RI
Sbjct: 439 PEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRI 498
Query: 182 LSTMLSEAMRILQEGTSPKDLDRLTKQFGFPVGAATLSDEVGIDVGAHIAKDLSKTFGDR 241
L+ ++EA+R+L EG + +D +FGFPVG L DEVGID G I L +G+R
Sbjct: 499 LAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER 558
Query: 242 FSGGNLNVLNEMVEKGYLDFKNKDGYY 268
FS NV++ ++ KN G+Y
Sbjct: 559 FS-APANVVSSILNDDRKGRKNGRGFY 584
>sp|B6I6Q4|FADJ_ECOSE Fatty acid oxidation complex subunit alpha OS=Escherichia coli
(strain SE11) GN=fadJ PE=3 SV=1
Length = 714
Score = 122 bits (307), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/147 (44%), Positives = 88/147 (59%), Gaps = 1/147 (0%)
Query: 122 PHLIIGMHYFSPVDKMQLLEIITTEQTSQDTAASAVAVGLKQGKVVITVKDGPGFYTTRI 181
P +IG+H+FSPV+KM L+EII TS T A+ V + KQGK I V+D GFY RI
Sbjct: 439 PEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRI 498
Query: 182 LSTMLSEAMRILQEGTSPKDLDRLTKQFGFPVGAATLSDEVGIDVGAHIAKDLSKTFGDR 241
L+ ++EA+R+L EG + +D +FGFPVG L DEVGID G I L +G+R
Sbjct: 499 LAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER 558
Query: 242 FSGGNLNVLNEMVEKGYLDFKNKDGYY 268
FS NV++ ++ KN G+Y
Sbjct: 559 FS-APANVVSSILNDDRKGRKNGRGFY 584
>sp|A7ZPF8|FADJ_ECO24 Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O139:H28 (strain E24377A / ETEC) GN=fadJ PE=3 SV=1
Length = 714
Score = 122 bits (307), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/147 (44%), Positives = 88/147 (59%), Gaps = 1/147 (0%)
Query: 122 PHLIIGMHYFSPVDKMQLLEIITTEQTSQDTAASAVAVGLKQGKVVITVKDGPGFYTTRI 181
P +IG+H+FSPV+KM L+EII TS T A+ V + KQGK I V+D GFY RI
Sbjct: 439 PEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRI 498
Query: 182 LSTMLSEAMRILQEGTSPKDLDRLTKQFGFPVGAATLSDEVGIDVGAHIAKDLSKTFGDR 241
L+ ++EA+R+L EG + +D +FGFPVG L DEVGID G I L +G+R
Sbjct: 499 LAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER 558
Query: 242 FSGGNLNVLNEMVEKGYLDFKNKDGYY 268
FS NV++ ++ KN G+Y
Sbjct: 559 FS-APANVVSSILNDDRKGRKNGRGFY 584
>sp|B7N5V2|FADJ_ECOLU Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O17:K52:H18 (strain UMN026 / ExPEC) GN=fadJ PE=3 SV=1
Length = 714
Score = 122 bits (307), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/147 (44%), Positives = 88/147 (59%), Gaps = 1/147 (0%)
Query: 122 PHLIIGMHYFSPVDKMQLLEIITTEQTSQDTAASAVAVGLKQGKVVITVKDGPGFYTTRI 181
P +IG+H+FSPV+KM L+EII TS T A+ V + KQGK I V+D GFY RI
Sbjct: 439 PEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRI 498
Query: 182 LSTMLSEAMRILQEGTSPKDLDRLTKQFGFPVGAATLSDEVGIDVGAHIAKDLSKTFGDR 241
L+ ++EA+R+L EG + +D +FGFPVG L DEVGID G I L +G+R
Sbjct: 499 LAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER 558
Query: 242 FSGGNLNVLNEMVEKGYLDFKNKDGYY 268
FS NV++ ++ KN G+Y
Sbjct: 559 FS-APANVVSSILNDDRKGRKNGRGFY 584
>sp|Q3YZM2|FADJ_SHISS Fatty acid oxidation complex subunit alpha OS=Shigella sonnei
(strain Ss046) GN=fadJ PE=3 SV=1
Length = 714
Score = 122 bits (307), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/147 (44%), Positives = 88/147 (59%), Gaps = 1/147 (0%)
Query: 122 PHLIIGMHYFSPVDKMQLLEIITTEQTSQDTAASAVAVGLKQGKVVITVKDGPGFYTTRI 181
P +IG+H+FSPV+KM L+EII TS T A+ V + KQGK I V+D GFY RI
Sbjct: 439 PEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRI 498
Query: 182 LSTMLSEAMRILQEGTSPKDLDRLTKQFGFPVGAATLSDEVGIDVGAHIAKDLSKTFGDR 241
L+ ++EA+R+L EG + +D +FGFPVG L DEVGID G I L +G+R
Sbjct: 499 LAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER 558
Query: 242 FSGGNLNVLNEMVEKGYLDFKNKDGYY 268
FS NV++ ++ KN G+Y
Sbjct: 559 FS-APANVVSSILNDDRKGRKNGRGFY 584
>sp|Q83QQ0|FADJ_SHIFL Fatty acid oxidation complex subunit alpha OS=Shigella flexneri
GN=fadJ PE=3 SV=1
Length = 714
Score = 122 bits (307), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/147 (44%), Positives = 88/147 (59%), Gaps = 1/147 (0%)
Query: 122 PHLIIGMHYFSPVDKMQLLEIITTEQTSQDTAASAVAVGLKQGKVVITVKDGPGFYTTRI 181
P +IG+H+FSPV+KM L+EII TS T A+ V + KQGK I V+D GFY RI
Sbjct: 439 PEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRI 498
Query: 182 LSTMLSEAMRILQEGTSPKDLDRLTKQFGFPVGAATLSDEVGIDVGAHIAKDLSKTFGDR 241
L+ ++EA+R+L EG + +D +FGFPVG L DEVGID G I L +G+R
Sbjct: 499 LAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER 558
Query: 242 FSGGNLNVLNEMVEKGYLDFKNKDGYY 268
FS NV++ ++ KN G+Y
Sbjct: 559 FS-APANVVSSILNDDRKGRKNGRGFY 584
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.137 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 101,361,397
Number of Sequences: 539616
Number of extensions: 4214758
Number of successful extensions: 11246
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 227
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 10889
Number of HSP's gapped (non-prelim): 265
length of query: 269
length of database: 191,569,459
effective HSP length: 115
effective length of query: 154
effective length of database: 129,513,619
effective search space: 19945097326
effective search space used: 19945097326
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)