Query psy9059
Match_columns 269
No_of_seqs 290 out of 2147
Neff 6.3
Searched_HMMs 29240
Date Fri Aug 16 17:52:47 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9059.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9059hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3zwc_A Peroxisomal bifunctiona 100.0 1.2E-55 4.3E-60 448.6 19.4 212 51-269 379-600 (742)
2 3ado_A Lambda-crystallin; L-gu 100.0 4.7E-55 1.6E-59 406.3 15.0 172 51-228 72-250 (319)
3 3k6j_A Protein F01G10.3, confi 100.0 1.5E-50 5.1E-55 392.0 20.9 204 51-269 116-321 (460)
4 1zej_A HBD-9, 3-hydroxyacyl-CO 100.0 1.1E-49 3.7E-54 366.3 19.6 210 47-269 55-270 (293)
5 3mog_A Probable 3-hydroxybutyr 100.0 8.7E-49 3E-53 381.9 21.7 209 52-269 71-284 (483)
6 4e12_A Diketoreductase; oxidor 100.0 3.7E-49 1.3E-53 358.2 14.6 207 52-269 71-282 (283)
7 1f0y_A HCDH, L-3-hydroxyacyl-C 100.0 3.2E-47 1.1E-51 347.4 23.2 210 52-269 86-300 (302)
8 2wtb_A MFP2, fatty acid multif 100.0 4.5E-47 1.6E-51 385.4 21.2 209 51-269 377-587 (725)
9 1wdk_A Fatty oxidation complex 100.0 4.8E-47 1.6E-51 384.7 18.2 209 52-269 380-591 (715)
10 1zcj_A Peroxisomal bifunctiona 100.0 2.2E-44 7.7E-49 348.7 19.4 207 54-269 103-321 (463)
11 2dpo_A L-gulonate 3-dehydrogen 100.0 1.2E-40 4E-45 309.2 16.0 178 52-236 73-257 (319)
12 3mog_A Probable 3-hydroxybutyr 100.0 7.4E-30 2.5E-34 248.6 15.3 155 100-264 320-477 (483)
13 3ctv_A HBD-10, 3-hydroxyacyl-C 100.0 2.3E-29 7.8E-34 199.6 4.7 103 162-266 3-109 (110)
14 1zcj_A Peroxisomal bifunctiona 99.8 1.8E-18 6.2E-23 167.2 10.4 110 146-259 330-447 (463)
15 3k6j_A Protein F01G10.3, confi 99.6 4.6E-16 1.6E-20 150.6 3.1 89 175-265 356-452 (460)
16 2ewd_A Lactate dehydrogenase,; 99.6 1.1E-16 3.7E-21 147.1 -3.3 142 51-224 58-229 (317)
17 3zwc_A Peroxisomal bifunctiona 99.5 9.6E-15 3.3E-19 148.6 9.3 118 148-269 611-736 (742)
18 1wdk_A Fatty oxidation complex 99.4 2.6E-13 8.9E-18 137.6 8.8 86 174-269 624-715 (715)
19 2wtb_A MFP2, fatty acid multif 99.4 4E-13 1.4E-17 136.4 9.6 81 175-257 625-711 (725)
20 3d1l_A Putative NADP oxidoredu 99.2 2.4E-11 8.3E-16 107.6 7.0 168 53-233 55-247 (266)
21 2i76_A Hypothetical protein; N 99.0 9.2E-11 3.1E-15 105.2 3.3 166 56-237 48-239 (276)
22 3tri_A Pyrroline-5-carboxylate 99.0 1.2E-09 4.2E-14 98.5 10.4 109 53-169 50-161 (280)
23 3gt0_A Pyrroline-5-carboxylate 98.8 3.4E-08 1.2E-12 86.8 11.5 143 53-207 50-205 (247)
24 3ggo_A Prephenate dehydrogenas 98.6 7.9E-08 2.7E-12 88.2 8.7 120 55-181 82-215 (314)
25 2h78_A Hibadh, 3-hydroxyisobut 98.4 2.9E-07 9.9E-12 82.8 6.1 149 53-211 46-214 (302)
26 2y0c_A BCEC, UDP-glucose dehyd 98.2 6E-07 2.1E-11 87.0 4.8 145 52-206 70-257 (478)
27 3dfu_A Uncharacterized protein 98.2 3.1E-06 1.1E-10 74.9 8.2 125 63-204 40-177 (232)
28 3qsg_A NAD-binding phosphogluc 98.2 1.4E-06 4.9E-11 79.3 5.4 144 53-209 70-231 (312)
29 3c24_A Putative oxidoreductase 98.1 5.2E-06 1.8E-10 74.1 8.4 105 59-171 60-183 (286)
30 3pef_A 6-phosphogluconate dehy 98.1 2.6E-06 8.9E-11 76.1 6.2 148 53-211 44-212 (287)
31 3qha_A Putative oxidoreductase 98.1 1.2E-05 4.1E-10 72.5 9.4 144 52-207 57-223 (296)
32 2q3e_A UDP-glucose 6-dehydroge 98.0 4.8E-06 1.7E-10 80.1 5.3 151 52-207 68-257 (467)
33 3doj_A AT3G25530, dehydrogenas 98.0 4.8E-06 1.6E-10 75.6 4.9 148 53-211 64-232 (310)
34 2izz_A Pyrroline-5-carboxylate 97.9 4.6E-05 1.6E-09 69.5 10.6 109 53-169 71-184 (322)
35 2uyy_A N-PAC protein; long-cha 97.9 3.7E-06 1.3E-10 76.0 3.0 149 53-209 73-239 (316)
36 3pdu_A 3-hydroxyisobutyrate de 97.9 1E-05 3.5E-10 72.3 5.6 149 53-211 44-212 (287)
37 3g0o_A 3-hydroxyisobutyrate de 97.9 1.1E-05 3.7E-10 72.8 5.7 147 55-211 53-220 (303)
38 4dll_A 2-hydroxy-3-oxopropiona 97.9 2.6E-05 8.9E-10 71.1 7.4 149 53-211 74-240 (320)
39 1yqg_A Pyrroline-5-carboxylate 97.8 5.1E-05 1.7E-09 66.3 8.1 138 53-207 45-197 (263)
40 1yb4_A Tartronic semialdehyde 97.8 1.4E-05 4.7E-10 71.0 4.4 146 53-209 45-211 (295)
41 3cky_A 2-hydroxymethyl glutara 97.7 2.7E-05 9.2E-10 69.5 4.8 145 53-207 47-210 (301)
42 2ahr_A Putative pyrroline carb 97.7 0.00019 6.4E-09 62.7 10.0 139 54-206 48-197 (259)
43 1mv8_A GMD, GDP-mannose 6-dehy 97.7 6.5E-05 2.2E-09 71.4 7.2 147 51-207 61-246 (436)
44 3b1f_A Putative prephenate deh 97.7 3.9E-05 1.3E-09 68.2 5.1 111 55-171 55-180 (290)
45 3ktd_A Prephenate dehydrogenas 97.6 3.5E-05 1.2E-09 71.6 4.2 111 55-170 53-185 (341)
46 2rcy_A Pyrroline carboxylate r 97.6 0.00065 2.2E-08 59.2 12.1 107 52-171 44-155 (262)
47 1vpd_A Tartronate semialdehyde 97.6 9E-05 3.1E-09 65.9 6.0 148 53-209 48-214 (299)
48 2f1k_A Prephenate dehydrogenas 97.5 0.00016 5.6E-09 63.7 7.6 117 55-181 47-177 (279)
49 1np3_A Ketol-acid reductoisome 97.5 0.00021 7.1E-09 65.8 8.3 137 54-202 61-223 (338)
50 1jay_A Coenzyme F420H2:NADP+ o 97.5 7.9E-05 2.7E-09 63.0 4.7 110 52-172 51-181 (212)
51 1pzg_A LDH, lactate dehydrogen 97.5 3.7E-05 1.3E-09 70.9 2.7 72 51-128 63-156 (331)
52 2g5c_A Prephenate dehydrogenas 97.5 0.0002 6.9E-09 63.3 7.1 108 56-171 51-172 (281)
53 2hjr_A Malate dehydrogenase; m 97.5 1.5E-05 5.3E-10 73.4 -0.3 70 51-129 68-156 (328)
54 3l6d_A Putative oxidoreductase 97.5 7.4E-05 2.5E-09 67.6 4.2 147 53-209 52-215 (306)
55 4ezb_A Uncharacterized conserv 97.4 0.0009 3.1E-08 60.9 10.6 139 57-208 77-232 (317)
56 2gf2_A Hibadh, 3-hydroxyisobut 97.3 0.0001 3.5E-09 65.5 3.6 148 53-210 43-210 (296)
57 2pv7_A T-protein [includes: ch 97.3 0.0004 1.4E-08 62.5 7.5 104 59-171 58-165 (298)
58 1t2d_A LDH-P, L-lactate dehydr 97.3 6.1E-05 2.1E-09 69.2 1.5 71 51-128 58-150 (322)
59 2ew2_A 2-dehydropantoate 2-red 97.3 0.00099 3.4E-08 59.0 9.0 133 68-206 74-249 (316)
60 2o3j_A UDP-glucose 6-dehydroge 97.1 0.003 1E-07 60.9 11.1 151 52-207 72-263 (481)
61 3gg2_A Sugar dehydrogenase, UD 96.9 0.0025 8.7E-08 61.0 9.0 150 51-207 63-248 (450)
62 2i6t_A Ubiquitin-conjugating e 96.8 0.00017 5.9E-09 65.8 -0.3 67 53-128 65-149 (303)
63 2p4q_A 6-phosphogluconate dehy 96.8 0.00073 2.5E-08 65.6 3.8 148 52-206 57-226 (497)
64 3k96_A Glycerol-3-phosphate de 96.7 0.017 5.9E-07 53.4 12.5 139 52-202 85-261 (356)
65 4e21_A 6-phosphogluconate dehy 96.6 0.0028 9.4E-08 59.0 6.5 147 53-209 65-273 (358)
66 3g79_A NDP-N-acetyl-D-galactos 96.6 0.0061 2.1E-07 59.0 8.9 151 51-209 87-274 (478)
67 2vns_A Metalloreductase steap3 96.5 0.0011 3.7E-08 56.8 2.4 106 53-172 71-194 (215)
68 1a5z_A L-lactate dehydrogenase 96.3 0.00011 3.7E-09 67.2 -5.1 107 52-189 55-183 (319)
69 1i36_A Conserved hypothetical 96.3 0.0065 2.2E-07 52.9 6.6 138 58-210 48-198 (264)
70 2cvz_A Dehydrogenase, 3-hydrox 96.3 0.002 6.8E-08 56.7 3.2 138 60-209 49-204 (289)
71 2iz1_A 6-phosphogluconate dehy 96.2 0.0082 2.8E-07 57.6 7.2 147 53-206 52-222 (474)
72 1ks9_A KPA reductase;, 2-dehyd 96.0 0.039 1.3E-06 48.0 9.8 130 59-202 56-227 (291)
73 4a7p_A UDP-glucose dehydrogena 95.8 0.031 1.1E-06 53.5 9.3 149 51-207 69-252 (446)
74 1ur5_A Malate dehydrogenase; o 95.8 0.0014 4.8E-08 59.6 -0.3 69 51-128 56-143 (309)
75 2pgd_A 6-phosphogluconate dehy 95.6 0.0094 3.2E-07 57.3 4.5 148 53-207 50-220 (482)
76 2zyd_A 6-phosphogluconate dehy 95.5 0.019 6.5E-07 55.3 6.6 147 53-206 62-231 (480)
77 4huj_A Uncharacterized protein 95.5 0.0094 3.2E-07 51.0 3.9 105 56-171 71-197 (220)
78 3pid_A UDP-glucose 6-dehydroge 95.3 0.032 1.1E-06 53.3 7.1 145 51-206 94-268 (432)
79 2v6b_A L-LDH, L-lactate dehydr 95.3 0.0056 1.9E-07 55.4 1.7 68 52-128 55-138 (304)
80 1pgj_A 6PGDH, 6-PGDH, 6-phosph 95.0 0.025 8.6E-07 54.4 5.6 148 53-207 52-221 (478)
81 1yj8_A Glycerol-3-phosphate de 94.9 0.18 6.1E-06 46.3 10.8 137 52-201 89-272 (375)
82 1x0v_A GPD-C, GPDH-C, glycerol 94.6 0.038 1.3E-06 50.0 5.4 137 52-201 76-256 (354)
83 1dlj_A UDP-glucose dehydrogena 94.5 0.12 4.1E-06 48.4 8.8 148 51-207 58-240 (402)
84 2w2k_A D-mandelate dehydrogena 93.4 0.01 3.5E-07 54.8 -1.0 91 53-150 207-307 (348)
85 2raf_A Putative dinucleotide-b 93.2 0.068 2.3E-06 45.3 4.0 100 63-172 54-176 (209)
86 3c7a_A Octopine dehydrogenase; 92.9 0.097 3.3E-06 48.5 4.9 51 53-109 68-119 (404)
87 2gcg_A Glyoxylate reductase/hy 92.8 0.022 7.6E-07 52.0 0.4 90 53-149 198-297 (330)
88 2b0j_A 5,10-methenyltetrahydro 92.8 2.7 9.2E-05 38.4 13.9 123 40-170 107-241 (358)
89 4gwg_A 6-phosphogluconate dehy 92.7 0.1 3.5E-06 50.5 4.9 145 53-206 52-221 (484)
90 2dbq_A Glyoxylate reductase; D 92.0 0.025 8.6E-07 51.8 -0.4 89 54-149 193-290 (334)
91 3ba1_A HPPR, hydroxyphenylpyru 91.2 0.075 2.6E-06 48.8 1.9 90 54-149 203-301 (333)
92 2d0i_A Dehydrogenase; structur 91.2 0.12 4E-06 47.3 3.2 89 54-150 189-287 (333)
93 1evy_A Glycerol-3-phosphate de 90.6 0.88 3E-05 41.2 8.5 136 52-200 71-253 (366)
94 3fr7_A Putative ketol-acid red 90.2 0.22 7.4E-06 48.6 4.2 100 58-168 113-232 (525)
95 4gbj_A 6-phosphogluconate dehy 90.0 0.2 6.7E-06 45.0 3.5 145 52-210 47-214 (297)
96 2d4a_B Malate dehydrogenase; a 89.8 0.09 3.1E-06 47.6 1.1 69 51-128 53-140 (308)
97 1txg_A Glycerol-3-phosphate de 89.7 1.1 3.8E-05 39.6 8.3 142 53-202 56-242 (335)
98 3obb_A Probable 3-hydroxyisobu 89.0 0.34 1.2E-05 43.6 4.3 145 53-211 46-214 (300)
99 3ojo_A CAP5O; rossmann fold, c 87.7 7 0.00024 37.0 12.7 145 51-206 72-250 (431)
100 4fgw_A Glycerol-3-phosphate de 87.4 0.93 3.2E-05 42.6 6.4 62 38-109 93-154 (391)
101 3hwr_A 2-dehydropantoate 2-red 84.8 1.3 4.6E-05 39.5 5.8 111 53-180 74-197 (318)
102 3ghy_A Ketopantoate reductase 84.4 2.4 8.2E-05 38.0 7.4 49 54-109 59-107 (335)
103 3vtf_A UDP-glucose 6-dehydroge 82.5 16 0.00055 34.7 12.5 150 51-206 82-263 (444)
104 1ldn_A L-lactate dehydrogenase 80.6 0.36 1.2E-05 43.6 0.3 46 58-108 66-127 (316)
105 1obb_A Maltase, alpha-glucosid 80.5 0.15 5.1E-06 49.3 -2.5 25 51-77 62-86 (480)
106 2qyt_A 2-dehydropantoate 2-red 76.0 8.9 0.0003 33.3 8.0 108 54-172 72-193 (317)
107 1hyh_A L-hicdh, L-2-hydroxyiso 71.1 1.6 5.6E-05 38.8 1.9 63 57-128 61-146 (309)
108 3fef_A Putative glucosidase LP 70.3 3.5 0.00012 39.3 4.1 25 51-77 60-84 (450)
109 3hn2_A 2-dehydropantoate 2-red 69.8 28 0.00094 30.6 9.8 109 56-173 60-179 (312)
110 3dtt_A NADP oxidoreductase; st 68.3 11 0.00039 32.0 6.7 107 56-172 80-213 (245)
111 3i83_A 2-dehydropantoate 2-red 68.0 14 0.00049 32.6 7.5 110 55-172 60-180 (320)
112 3fi9_A Malate dehydrogenase; s 64.7 1.9 6.5E-05 39.6 1.0 52 52-107 62-129 (343)
113 3ldh_A Lactate dehydrogenase; 64.2 1.5 5.2E-05 40.2 0.2 51 51-107 75-141 (330)
114 1bg6_A N-(1-D-carboxylethyl)-L 58.6 11 0.00038 33.3 4.9 45 55-105 64-108 (359)
115 1z82_A Glycerol-3-phosphate de 52.4 1.2E+02 0.0041 26.5 11.6 134 53-202 68-236 (335)
116 1guz_A Malate dehydrogenase; o 51.9 6.1 0.00021 35.2 2.0 71 51-128 55-142 (310)
117 1up7_A 6-phospho-beta-glucosid 48.0 12 0.0004 35.2 3.4 70 52-128 59-163 (417)
118 2yjz_A Metalloreductase steap4 52.5 4.1 0.00014 34.0 0.0 104 54-171 62-181 (201)
119 4f2g_A Otcase 1, ornithine car 42.5 18 0.0006 32.8 3.5 17 52-68 202-218 (309)
120 3p7m_A Malate dehydrogenase; p 41.8 4.3 0.00015 36.8 -0.7 69 52-129 60-147 (321)
121 3u95_A Glycoside hydrolase, fa 40.0 20 0.00069 34.2 3.7 23 52-76 62-84 (477)
122 2i6u_A Otcase, ornithine carba 37.9 25 0.00087 31.7 3.8 21 52-74 203-223 (307)
123 1u8x_X Maltose-6'-phosphate gl 36.8 22 0.00077 33.9 3.5 26 51-78 87-112 (472)
124 1lld_A L-lactate dehydrogenase 35.8 18 0.00062 31.6 2.5 52 52-109 62-127 (319)
125 1ygy_A PGDH, D-3-phosphoglycer 34.2 15 0.00052 35.3 1.8 107 54-167 185-308 (529)
126 3gvx_A Glycerate dehydrogenase 32.5 46 0.0016 29.5 4.6 98 54-157 161-269 (290)
127 4dgs_A Dehydrogenase; structur 30.7 54 0.0018 29.8 4.8 52 53-108 209-260 (340)
128 1s6y_A 6-phospho-beta-glucosid 30.6 40 0.0014 31.9 4.0 25 51-77 68-92 (450)
129 3gvi_A Malate dehydrogenase; N 29.6 20 0.0007 32.3 1.7 70 51-129 61-149 (324)
130 3ulk_A Ketol-acid reductoisome 28.6 41 0.0014 32.4 3.7 138 52-200 85-248 (491)
131 1gdh_A D-glycerate dehydrogena 28.2 40 0.0014 30.0 3.5 52 53-108 189-240 (320)
132 1vlv_A Otcase, ornithine carba 26.1 20 0.00069 32.6 1.1 17 52-68 222-238 (325)
133 3tl2_A Malate dehydrogenase; c 26.1 26 0.00088 31.5 1.7 47 51-103 64-124 (315)
134 1sc6_A PGDH, D-3-phosphoglycer 25.5 55 0.0019 30.4 4.0 52 51-106 182-233 (404)
135 3gd5_A Otcase, ornithine carba 24.3 25 0.00086 32.0 1.3 17 52-68 211-227 (323)
136 1tzy_D Histone H4-VI; histone- 24.2 1.1E+02 0.0036 22.8 4.7 57 154-212 33-97 (103)
137 1dxh_A Ornithine carbamoyltran 23.9 16 0.00055 33.4 -0.1 17 52-68 210-226 (335)
138 1duv_G Octase-1, ornithine tra 23.9 15 0.0005 33.7 -0.3 21 52-74 210-230 (333)
139 2yfw_B Histone H4, H4; cell cy 23.1 1.2E+02 0.004 22.7 4.7 57 154-212 33-97 (103)
140 2i99_A MU-crystallin homolog; 22.6 1.3E+02 0.0046 26.2 5.8 41 54-104 184-224 (312)
141 2j6i_A Formate dehydrogenase; 22.5 74 0.0025 28.9 4.2 52 53-108 208-259 (364)
142 3grf_A Ornithine carbamoyltran 22.5 29 0.001 31.6 1.4 20 52-73 220-239 (328)
143 3gg9_A D-3-phosphoglycerate de 22.4 62 0.0021 29.4 3.6 51 52-106 201-251 (352)
144 1pvv_A Otcase, ornithine carba 22.1 24 0.00082 32.0 0.7 17 52-68 209-225 (315)
145 1id3_B Histone H4; nucleosome 22.1 1.5E+02 0.0053 22.0 5.2 59 154-212 32-96 (102)
146 1mx3_A CTBP1, C-terminal bindi 20.8 74 0.0025 28.8 3.7 51 54-108 211-261 (347)
147 4amu_A Ornithine carbamoyltran 20.8 12 0.0004 34.9 -1.7 20 52-73 237-256 (365)
148 3jtm_A Formate dehydrogenase, 20.3 84 0.0029 28.5 4.0 52 53-108 207-258 (351)
No 1
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=100.00 E-value=1.2e-55 Score=448.59 Aligned_cols=212 Identities=25% Similarity=0.417 Sum_probs=193.5
Q ss_pred CcCeEEecCHHHHhcCCCCceEEeecCCCcCCCchhHHHHHHHhcCCCCcEEecCCCCCccccccc-CCCCCCCeEEEee
Q psy9059 51 HTGITYLYTYSERLMGSNGLAMVFPLQEQIPIQTPQQMSERIYMYTYSERLMGSNGLAMVFPLQEQ-IPIQTPHLIIGMH 129 (269)
Q Consensus 51 ~~~l~~~~~~~~a~~~~~~~~V~E~vpE~l~~K~k~~l~~~l~~~~~~~~iiaSnTS~l~~p~~~~-~~~~~p~R~i~~H 129 (269)
..+++++.++++ +++ ||||||||+|++++| +++|++|+++|+++||||||||++ |++++ +.+.+|+||+|+|
T Consensus 379 ~~~~~~~~~~~~-l~~--aDlVIEAV~E~l~iK--~~vf~~le~~~~~~aIlASNTSsl--~i~~ia~~~~~p~r~ig~H 451 (742)
T 3zwc_A 379 KPKLRFSSSTKE-LST--VDLVVEAVFEDMNLK--KKVFAELSALCKPGAFLCTNTSAL--NVDDIASSTDRPQLVIGTH 451 (742)
T ss_dssp CCCEEEESCGGG-GGS--CSEEEECCCSCHHHH--HHHHHHHHHHSCTTCEEEECCSSS--CHHHHHTTSSCGGGEEEEE
T ss_pred hhhhcccCcHHH-Hhh--CCEEEEeccccHHHH--HHHHHHHhhcCCCCceEEecCCcC--ChHHHHhhcCCcccccccc
Confidence 578899988765 655 559999999999999 999999999999999999999998 88885 7899999999999
Q ss_pred ccCCCCCCcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEEeccCchhHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhc
Q psy9059 130 YFSPVDKMQLLEIITTEQTSQDTAASAVAVGLKQGKVVITVKDGPGFYTTRILSTMLSEAMRILQEGTSPKDLDRLTKQF 209 (269)
Q Consensus 130 ffnP~~~~~lVEiv~~~~Ts~e~~~~~~~~~~~lGk~pv~vkd~pGfI~nRll~al~~EA~~lv~eGis~edID~a~~g~ 209 (269)
|||||+.|||||||++++||+++++++.+|++++||+||+++|+||||+||++.++++||++++++|+++++||.+++++
T Consensus 452 FfnP~~~m~LVEvi~g~~Ts~e~~~~~~~~~~~lgK~pV~vkd~pGFi~NRi~~~~~~ea~~l~~eG~~~~~id~a~~~~ 531 (742)
T 3zwc_A 452 FFSPAHVMRLLEVIPSRYSSPTTIATVMSLSKKIGKIGVVVGNCYGFVGNRMLAPYYNQGFFLLEEGSKPEDVDGVLEEF 531 (742)
T ss_dssp CCSSTTTCCEEEEEECSSCCHHHHHHHHHHHHHTTCEEEECCCSTTTTHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred ccCCCCCCceEEEecCCCCCHHHHHHHHHHHHHhCCCCcccCCCCCccHHHHhhHHHHHHHHHHHcCCCHHHHHHHHHHc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCchhhHHHHhhchHHHHHHHHHHHHHhCCC-------C--CCChhHHHHHHHHcCCCCCCCCCccCC
Q psy9059 210 GFPVGAATLSDEVGIDVGAHIAKDLSKTFGDR-------F--SGGNLNVLNEMVEKGYLDFKNKDGYYP 269 (269)
Q Consensus 210 G~p~GPf~~~D~~Gld~~~~~~~~l~~~~g~~-------~--~~~~~~lL~~lv~~G~lG~ksG~GFY~ 269 (269)
|+|||||+++|++|+|+..++++.+....+.. . ...+++++++|+++|++|+|||+|||+
T Consensus 532 G~pmGPf~l~D~vGlDv~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~mv~~G~lG~KtG~GFY~ 600 (742)
T 3zwc_A 532 GFKMGPFRVSDLAGLDVGWKIRKGQGLTGPSLPPGTPVRKRGNSRYSPLGDMLCEAGRFGQKTGKGWYQ 600 (742)
T ss_dssp TCSSCHHHHHHHHCHHHHHHHHHHTTSSSTTSCTTCCTTEETTEECCCHHHHHHTTTCCBGGGTBSSSE
T ss_pred CCCCChHHHHHHhCHHHHHHHHHHHHhhCcccCccchhhhcccccccHHHHHHHHCCCccccCCCeeEE
Confidence 99999999999999999999998876543210 0 001357899999999999999999995
No 2
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=100.00 E-value=4.7e-55 Score=406.27 Aligned_cols=172 Identities=20% Similarity=0.246 Sum_probs=163.7
Q ss_pred CcCeEEecCHHHHhcCCCCceEEeecCCCcCCCchhHHHHHHHhcCCCCcEEecCCCCCccccccc-CCCCCCCeEEEee
Q psy9059 51 HTGITYLYTYSERLMGSNGLAMVFPLQEQIPIQTPQQMSERIYMYTYSERLMGSNGLAMVFPLQEQ-IPIQTPHLIIGMH 129 (269)
Q Consensus 51 ~~~l~~~~~~~~a~~~~~~~~V~E~vpE~l~~K~k~~l~~~l~~~~~~~~iiaSnTS~l~~p~~~~-~~~~~p~R~i~~H 129 (269)
-++|+++++++||++++| |||||||||+++| +++|++|+++|+++||||||||++ +++++ +.+.||+||+|+|
T Consensus 72 l~~i~~~~~l~~a~~~ad--~ViEav~E~l~iK--~~lf~~l~~~~~~~aIlaSNTSsl--~is~ia~~~~~p~r~ig~H 145 (319)
T 3ado_A 72 LSLISSCTNLAEAVEGVV--HIQECVPENLDLK--RKIFAQLDSIVDDRVVLSSSSSCL--LPSKLFTGLAHVKQCIVAH 145 (319)
T ss_dssp HHTEEEECCHHHHTTTEE--EEEECCCSCHHHH--HHHHHHHHTTCCSSSEEEECCSSC--CHHHHHTTCTTGGGEEEEE
T ss_pred HhhcccccchHhHhccCc--EEeeccccHHHHH--HHHHHHHHHHhhhcceeehhhhhc--cchhhhhhccCCCcEEEec
Confidence 468999999999997766 9999999999999 999999999999999999999999 77785 7899999999999
Q ss_pred ccCCCCCCcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEE-eccCchhHHHHHHHHHHHHHHHHHcCC-CHHHHHHHHH
Q psy9059 130 YFSPVDKMQLLEIITTEQTSQDTAASAVAVGLKQGKVVITV-KDGPGFYTTRILSTMLSEAMRILQEGT-SPKDLDRLTK 207 (269)
Q Consensus 130 ffnP~~~~~lVEiv~~~~Ts~e~~~~~~~~~~~lGk~pv~v-kd~pGfI~nRll~al~~EA~~lv~eGi-s~edID~a~~ 207 (269)
|||||++|||||||+|++||+++++++.+|++++||+|+++ +|+||||+|||+.+++|||++++++|+ |++|||++|+
T Consensus 146 ffNP~~~m~LVEiv~g~~Ts~~~~~~~~~~~~~~gk~pv~v~kd~pGFi~NRl~~~~~~EA~~lv~eGvas~edID~~~~ 225 (319)
T 3ado_A 146 PVNPPYYIPLVELVPHPETSPATVDRTHALMRKIGQSPVRVLKEIDGFVLNRLQYAIISEAWRLVEEGIVSPSDLDLVMS 225 (319)
T ss_dssp ECSSTTTCCEEEEEECTTCCHHHHHHHHHHHHHTTCEEEECSSCCTTTTHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHH
T ss_pred CCCCccccchHHhcCCCCCcHHHHHHHHHHHHHhCCccCCcCCCCCCEeHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999977 999999999999999999999999999 9999999998
Q ss_pred -hcCCC---chhhHHHHhhchHHHH
Q psy9059 208 -QFGFP---VGAATLSDEVGIDVGA 228 (269)
Q Consensus 208 -g~G~p---~GPf~~~D~~Gld~~~ 228 (269)
|+|+| ||||+++|++|++...
T Consensus 226 ~g~g~~~a~mGPf~~~Dl~G~~~~~ 250 (319)
T 3ado_A 226 DGLGMRYAFIGPLETMHLNAEGMLS 250 (319)
T ss_dssp TTHHHHHTTSCHHHHHHHTTTSHHH
T ss_pred hCCCCCCCCcchhhhhhhcCccHHH
Confidence 99987 8999999999987543
No 3
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=100.00 E-value=1.5e-50 Score=392.00 Aligned_cols=204 Identities=22% Similarity=0.406 Sum_probs=189.6
Q ss_pred CcCeEEecCHHHHhcCCCCceEEeecCCCcCCCchhHHHHHHHhcCCCCcEEecCCCCCccccccc-CCCCCCCeEEEee
Q psy9059 51 HTGITYLYTYSERLMGSNGLAMVFPLQEQIPIQTPQQMSERIYMYTYSERLMGSNGLAMVFPLQEQ-IPIQTPHLIIGMH 129 (269)
Q Consensus 51 ~~~l~~~~~~~~a~~~~~~~~V~E~vpE~l~~K~k~~l~~~l~~~~~~~~iiaSnTS~l~~p~~~~-~~~~~p~R~i~~H 129 (269)
.++|++++|++ +++++| +|+|||||++++| +++|++|++++++++||+||||++ |++++ +.+.+|+|++++|
T Consensus 116 ~~~i~~t~dl~-al~~aD--lVIeAVpe~~~vk--~~v~~~l~~~~~~~aIlasnTSsl--~i~~ia~~~~~p~r~iG~H 188 (460)
T 3k6j_A 116 NANLKITSDFH-KLSNCD--LIVESVIEDMKLK--KELFANLENICKSTCIFGTNTSSL--DLNEISSVLRDPSNLVGIH 188 (460)
T ss_dssp HTTEEEESCGG-GCTTCS--EEEECCCSCHHHH--HHHHHHHHTTSCTTCEEEECCSSS--CHHHHHTTSSSGGGEEEEE
T ss_pred hcceEEeCCHH-HHccCC--EEEEcCCCCHHHH--HHHHHHHHhhCCCCCEEEecCCCh--hHHHHHHhccCCcceEEEE
Confidence 36789999995 776655 9999999999999 999999999999999999999998 77775 6788999999999
Q ss_pred ccCCCCCCcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEEeccCchhHHHHHHHHHHHHHHHH-HcCCCHHHHHHHHHh
Q psy9059 130 YFSPVDKMQLLEIITTEQTSQDTAASAVAVGLKQGKVVITVKDGPGFYTTRILSTMLSEAMRIL-QEGTSPKDLDRLTKQ 208 (269)
Q Consensus 130 ffnP~~~~~lVEiv~~~~Ts~e~~~~~~~~~~~lGk~pv~vkd~pGfI~nRll~al~~EA~~lv-~eGis~edID~a~~g 208 (269)
||||++.+++||||+++.|++++++++..+++.+||.|++++|.||||+||++.++++||++++ ++|+++++||++|++
T Consensus 189 ffnPv~~m~LvEIv~g~~Ts~e~~~~~~~l~~~lGk~~v~v~d~pGfi~Nril~~~~~EA~~l~~~~Ga~~e~ID~a~~~ 268 (460)
T 3k6j_A 189 FFNPANVIRLVEIIYGSHTSSQAIATAFQACESIKKLPVLVGNCKSFVFNRLLHVYFDQSQKLMYEYGYLPHQIDKIITN 268 (460)
T ss_dssp CCSSTTTCCEEEEECCSSCCHHHHHHHHHHHHHTTCEEEEESSCCHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHH
T ss_pred ecchhhhCCEEEEEeCCCCCHHHHHHHHHHHHHhCCEEEEEecccHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999 788899999999999
Q ss_pred cCCCchhhHHHHhhchHHHHHHHHHHHHHhCCCCCCChhHHHHHHHHcCCCCCCCCCccCC
Q psy9059 209 FGFPVGAATLSDEVGIDVGAHIAKDLSKTFGDRFSGGNLNVLNEMVEKGYLDFKNKDGYYP 269 (269)
Q Consensus 209 ~G~p~GPf~~~D~~Gld~~~~~~~~l~~~~g~~~~~~~~~lL~~lv~~G~lG~ksG~GFY~ 269 (269)
+|+|||||+++|++|+|+..++++.+ +. . +++++++|+++|++|+|||+|||+
T Consensus 269 ~G~pmGPf~l~D~vGlD~~~~i~~~~----~~--~--~~~~l~~~v~~G~lG~KtG~GFY~ 321 (460)
T 3k6j_A 269 FGFLMGPMTVADMNGFDVMEKLKKEN----GL--E--PNPIEKEMWRLKRYGRKTNKGFYK 321 (460)
T ss_dssp HTBSSCHHHHHHHHCTHHHHHHHHHS----CC--C--CCHHHHHHHHTTCCBGGGTBSSSE
T ss_pred cCCCcCHHHHHHHhchHHHHHHHHHh----cc--C--chHHHHHHHHCCCCeeecCCEEEE
Confidence 99999999999999999999888765 22 2 358999999999999999999995
No 4
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=100.00 E-value=1.1e-49 Score=366.26 Aligned_cols=210 Identities=24% Similarity=0.370 Sum_probs=195.5
Q ss_pred CCCCCcCeEEecCHHHHhcCCCCceEEeecCCCcCCCchhHHHHHHHhcCCCCcEEecCCCCCccccccc-CCCCCCCeE
Q psy9059 47 VSTSHTGITYLYTYSERLMGSNGLAMVFPLQEQIPIQTPQQMSERIYMYTYSERLMGSNGLAMVFPLQEQ-IPIQTPHLI 125 (269)
Q Consensus 47 ~~~~~~~l~~~~~~~~a~~~~~~~~V~E~vpE~l~~K~k~~l~~~l~~~~~~~~iiaSnTS~l~~p~~~~-~~~~~p~R~ 125 (269)
.++.-+++++++|+++ ++++| +|+||+||++++| +.+|++|+.+ +++||+||||++ +++.+ +.+.+|+|+
T Consensus 55 ~~~~~~~i~~~~~~~~-~~~aD--lVieavpe~~~vk--~~l~~~l~~~--~~~IlasntSti--~~~~~a~~~~~~~r~ 125 (293)
T 1zej_A 55 PEELLSKIEFTTTLEK-VKDCD--IVMEAVFEDLNTK--VEVLREVERL--TNAPLCSNTSVI--SVDDIAERLDSPSRF 125 (293)
T ss_dssp CGGGGGGEEEESSCTT-GGGCS--EEEECCCSCHHHH--HHHHHHHHTT--CCSCEEECCSSS--CHHHHHTTSSCGGGE
T ss_pred HHHHhCCeEEeCCHHH-HcCCC--EEEEcCcCCHHHH--HHHHHHHhcC--CCCEEEEECCCc--CHHHHHHHhhcccce
Confidence 3333468999999986 76655 9999999999999 9999999998 999999999998 56664 568999999
Q ss_pred EEeeccCCCCCCcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEEeccCchhHHHHHHHHHHHHHHHHHcCCCHHHHHHH
Q psy9059 126 IGMHYFSPVDKMQLLEIITTEQTSQDTAASAVAVGLKQGKVVITVKDGPGFYTTRILSTMLSEAMRILQEGTSPKDLDRL 205 (269)
Q Consensus 126 i~~HffnP~~~~~lVEiv~~~~Ts~e~~~~~~~~~~~lGk~pv~vkd~pGfI~nRll~al~~EA~~lv~eGis~edID~a 205 (269)
+|+|||||++.++++||++++.|++++++++..+++.+||.|++++|. |++||++.++++||++++++|+++++||.+
T Consensus 126 ~G~Hf~~Pv~~~~lveiv~g~~t~~~~~~~~~~l~~~lGk~~v~v~d~--fi~Nrll~~~~~EA~~l~~~Gv~~e~id~~ 203 (293)
T 1zej_A 126 LGVHWMNPPHVMPLVEIVISRFTDSKTVAFVEGFLRELGKEVVVCKGQ--SLVNRFNAAVLSEASRMIEEGVRAEDVDRV 203 (293)
T ss_dssp EEEEECSSTTTCCEEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEESS--CHHHHHHHHHHHHHHHHHHHTCCHHHHHHH
T ss_pred EeEEecCccccCCEEEEECCCCCCHHHHHHHHHHHHHcCCeEEEeccc--ccHHHHHHHHHHHHHHHHHhCCCHHHHHHH
Confidence 999999999999999999999999999999999999999999999987 999999999999999999999999999999
Q ss_pred HH-hcCCCc---hhhHHHHhhchHHHHHHHHHHHHHhCC-CCCCChhHHHHHHHHcCCCCCCCCCccCC
Q psy9059 206 TK-QFGFPV---GAATLSDEVGIDVGAHIAKDLSKTFGD-RFSGGNLNVLNEMVEKGYLDFKNKDGYYP 269 (269)
Q Consensus 206 ~~-g~G~p~---GPf~~~D~~Gld~~~~~~~~l~~~~g~-~~~~~~~~lL~~lv~~G~lG~ksG~GFY~ 269 (269)
++ |+|+|+ |||+++|.+|+|++.++++.+++.+++ +|+ +++++++|+++|++|+|||+|||+
T Consensus 204 ~~~g~g~~~~~~GP~~l~D~~Gld~~~~~~~~l~~~~~~~~~~--~~~~l~~~v~~G~lG~Ktg~Gfy~ 270 (293)
T 1zej_A 204 WKHHLGLLYTLFGPLGNLDYIGLDVAYYASLYLYKRFGDEKFK--PPEWLQEKIKKGEVGVKAGKGIYE 270 (293)
T ss_dssp HHTTHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCGGGS--CCHHHHHHHHTTCCBGGGTBSSSB
T ss_pred HHhcCCCCCCCCCHHHHHHHhchHHHHHHHHHHHHHcCCCcCC--CCHHHHHHHHCCCCccccCCEeee
Confidence 98 999999 999999999999999999999999987 787 578999999999999999999995
No 5
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=100.00 E-value=8.7e-49 Score=381.94 Aligned_cols=209 Identities=23% Similarity=0.407 Sum_probs=195.8
Q ss_pred cCeEEecCHHHHhcCCCCceEEeecCCCcCCCchhHHHHHHHhcCCCCcEEecCCCCCccccccc-CCCCCCCeEEEeec
Q psy9059 52 TGITYLYTYSERLMGSNGLAMVFPLQEQIPIQTPQQMSERIYMYTYSERLMGSNGLAMVFPLQEQ-IPIQTPHLIIGMHY 130 (269)
Q Consensus 52 ~~l~~~~~~~~a~~~~~~~~V~E~vpE~l~~K~k~~l~~~l~~~~~~~~iiaSnTS~l~~p~~~~-~~~~~p~R~i~~Hf 130 (269)
++|+++++++ +++++| +|+|||||++++| +++|++|++++++++||+||||++ +++.+ +.+.+|+|++++||
T Consensus 71 ~~i~~~~~~~-~~~~aD--lVIeAVpe~~~vk--~~v~~~l~~~~~~~~IlasntSti--~i~~ia~~~~~p~~~ig~hf 143 (483)
T 3mog_A 71 KRLIPVTDIH-ALAAAD--LVIEAASERLEVK--KALFAQLAEVCPPQTLLTTNTSSI--SITAIAAEIKNPERVAGLHF 143 (483)
T ss_dssp HTEEEECCGG-GGGGCS--EEEECCCCCHHHH--HHHHHHHHHHSCTTCEEEECCSSS--CHHHHTTTSSSGGGEEEEEE
T ss_pred hceeEeCCHH-HhcCCC--EEEEcCCCcHHHH--HHHHHHHHHhhccCcEEEecCCCC--CHHHHHHHccCccceEEeee
Confidence 4788999985 676655 9999999999999 999999999999999999999998 67764 67889999999999
Q ss_pred cCCCCCCcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEEeccCchhHHHHHHHHHHHHHHHHHcCC-CHHHHHHHHH-h
Q psy9059 131 FSPVDKMQLLEIITTEQTSQDTAASAVAVGLKQGKVVITVKDGPGFYTTRILSTMLSEAMRILQEGT-SPKDLDRLTK-Q 208 (269)
Q Consensus 131 fnP~~~~~lVEiv~~~~Ts~e~~~~~~~~~~~lGk~pv~vkd~pGfI~nRll~al~~EA~~lv~eGi-s~edID~a~~-g 208 (269)
|||++.++++||++++.|++++++++.++++++||.|++++|.|||++||++.++++||++++++|+ ++++||++|+ |
T Consensus 144 ~~Pa~v~~Lvevv~g~~Ts~e~~~~~~~l~~~lGk~~v~v~d~~Gfi~Nr~l~~~~~Ea~~l~~~g~~~~~~id~a~~~~ 223 (483)
T 3mog_A 144 FNPAPVMKLVEVVSGLATAAEVVEQLCELTLSWGKQPVRCHSTPGFIVNRVARPYYSEAWRALEEQVAAPEVIDAALRDG 223 (483)
T ss_dssp CSSTTTCCEEEEEECSSCCHHHHHHHHHHHHHTTCEEEEEESCTTTTHHHHTHHHHHHHHHHHHTTCSCHHHHHHHHHHT
T ss_pred cChhhhCCeEEEecCCCCCHHHHHHHHHHHHHhCCEEEEEeccCcchHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999 9999999998 9
Q ss_pred cCCCchhhHHHHhhchHHHHHHHHHHHHHh-CC-CCCCChhHHHHHHHHcCCCCCCCCCccCC
Q psy9059 209 FGFPVGAATLSDEVGIDVGAHIAKDLSKTF-GD-RFSGGNLNVLNEMVEKGYLDFKNKDGYYP 269 (269)
Q Consensus 209 ~G~p~GPf~~~D~~Gld~~~~~~~~l~~~~-g~-~~~~~~~~lL~~lv~~G~lG~ksG~GFY~ 269 (269)
+|+|||||+++|++|+|+..++++.+++.+ ++ +|. +++++++|+++|++|+|||+|||+
T Consensus 224 ~G~p~GP~~l~D~~Gld~~~~v~~~~~~~~~~~~~~~--~~~~~~~~v~~g~lG~k~g~GfY~ 284 (483)
T 3mog_A 224 AGFPMGPLELTDLIGQDVNFAVTCSVFNAFWQERRFL--PSLVQQELVIGGRLGKKSGLGVYD 284 (483)
T ss_dssp TCCSSCHHHHHHHHCHHHHHHHHHHHHHHTTSCGGGC--CCHHHHHHHHTTCCBGGGTBSSSB
T ss_pred CCCCCCHHHHHHHhchHHHHHHHHHHHHHhcCCCccC--chHHHHHHHHCCCCceeCCCEeEE
Confidence 999999999999999999999999998876 33 676 568999999999999999999995
No 6
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=100.00 E-value=3.7e-49 Score=358.18 Aligned_cols=207 Identities=17% Similarity=0.299 Sum_probs=191.6
Q ss_pred cCeEEecCHHHHhcCCCCceEEeecCCCcCCCchhHHHHHHHhcCCCCcEEecCCCCCccccccc-CCCCCCCeEEEeec
Q psy9059 52 TGITYLYTYSERLMGSNGLAMVFPLQEQIPIQTPQQMSERIYMYTYSERLMGSNGLAMVFPLQEQ-IPIQTPHLIIGMHY 130 (269)
Q Consensus 52 ~~l~~~~~~~~a~~~~~~~~V~E~vpE~l~~K~k~~l~~~l~~~~~~~~iiaSnTS~l~~p~~~~-~~~~~p~R~i~~Hf 130 (269)
++++++.+++|++.++| +|+|||||++++| +++|++|++++++++||+||||++ +++.+ +.+.+|+|++++||
T Consensus 71 ~~i~~~~~~~~~~~~aD--lVi~av~~~~~~~--~~v~~~l~~~~~~~~il~s~tS~~--~~~~la~~~~~~~~~ig~h~ 144 (283)
T 4e12_A 71 GGIRYSDDLAQAVKDAD--LVIEAVPESLDLK--RDIYTKLGELAPAKTIFATNSSTL--LPSDLVGYTGRGDKFLALHF 144 (283)
T ss_dssp HHCEEESCHHHHTTTCS--EEEECCCSCHHHH--HHHHHHHHHHSCTTCEEEECCSSS--CHHHHHHHHSCGGGEEEEEE
T ss_pred cCeEEeCCHHHHhccCC--EEEEeccCcHHHH--HHHHHHHHhhCCCCcEEEECCCCC--CHHHHHhhcCCCcceEEEcc
Confidence 56889999999997766 9999999999999 999999999999999999999998 66664 56788999999999
Q ss_pred cCCCCCCcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEE-eccCchhHHHHHHHHHHHHHHHHHcCC-CHHHHHHHHH-
Q psy9059 131 FSPVDKMQLLEIITTEQTSQDTAASAVAVGLKQGKVVITV-KDGPGFYTTRILSTMLSEAMRILQEGT-SPKDLDRLTK- 207 (269)
Q Consensus 131 fnP~~~~~lVEiv~~~~Ts~e~~~~~~~~~~~lGk~pv~v-kd~pGfI~nRll~al~~EA~~lv~eGi-s~edID~a~~- 207 (269)
|||++.++++|+++++.|++++++++.++++.+|+.|+++ +|.||||+||++.++++||++++++|+ ++++||++++
T Consensus 145 ~~p~~~~~lvevv~~~~t~~~~~~~~~~l~~~~g~~~v~v~~~~~g~i~nr~~~~~~~ea~~l~~~g~~~~~~id~~~~~ 224 (283)
T 4e12_A 145 ANHVWVNNTAEVMGTTKTDPEVYQQVVEFASAIGMVPIELKKEKAGYVLNSLLVPLLDAAAELLVDGIADPETIDKTWRI 224 (283)
T ss_dssp CSSTTTSCEEEEEECTTSCHHHHHHHHHHHHHTTCEEEECSSCCTTTTHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHHH
T ss_pred CCCcccCceEEEEeCCCCCHHHHHHHHHHHHHcCCEEEEEecCCCCEEehHHHHHHHHHHHHHHHhCCCCHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999 899999999999999999999999998 9999999998
Q ss_pred hcCCCchhhHHHHhhchHHHHHHHHHHHHHhC-CCCCCChhHHHHHHHHcCCCCCCCCCccCC
Q psy9059 208 QFGFPVGAATLSDEVGIDVGAHIAKDLSKTFG-DRFSGGNLNVLNEMVEKGYLDFKNKDGYYP 269 (269)
Q Consensus 208 g~G~p~GPf~~~D~~Gld~~~~~~~~l~~~~g-~~~~~~~~~lL~~lv~~G~lG~ksG~GFY~ 269 (269)
|+|+|+|||+++|++|+|+.++++++ ..+ +++. +++++++|+++|++|+|||+|||+
T Consensus 225 ~~g~~~Gp~~~~D~~Gld~~~~~~~~---~~~~~~~~--~~~~~~~~v~~g~lG~k~g~Gfy~ 282 (283)
T 4e12_A 225 GTGAPKGPFEIFDIVGLTTAYNISSV---SGPKQREF--AAYLKENYIDKGKLGLATGEGFYR 282 (283)
T ss_dssp HHCCSSCHHHHHHHHCHHHHHHHHHT---SCHHHHHH--HHHHHHHTGGGTCCBGGGTBSSSB
T ss_pred ccCCCcCHHHHHHhccHHHHHHHHhc---cccCcccC--chHHHHHHHHCCCCceeCCeEeec
Confidence 99999999999999999999998873 122 2344 678899999999999999999995
No 7
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=100.00 E-value=3.2e-47 Score=347.41 Aligned_cols=210 Identities=26% Similarity=0.425 Sum_probs=198.2
Q ss_pred cCeEEecCHHHHhcCCCCceEEeecCCCcCCCchhHHHHHHHhcCCCCcEEecCCCCCccccccc-CCCCCCCeEEEeec
Q psy9059 52 TGITYLYTYSERLMGSNGLAMVFPLQEQIPIQTPQQMSERIYMYTYSERLMGSNGLAMVFPLQEQ-IPIQTPHLIIGMHY 130 (269)
Q Consensus 52 ~~l~~~~~~~~a~~~~~~~~V~E~vpE~l~~K~k~~l~~~l~~~~~~~~iiaSnTS~l~~p~~~~-~~~~~p~R~i~~Hf 130 (269)
++++++++++|++.++| +|+|||||++++| ++++++|.+++++++||+||||++ +++.+ ..+.+|+|++++||
T Consensus 86 ~~i~~~~~~~~~~~~aD--~Vi~avp~~~~~~--~~v~~~l~~~~~~~~iv~s~ts~i--~~~~l~~~~~~~~~~~g~h~ 159 (302)
T 1f0y_A 86 STIATSTDAASVVHSTD--LVVEAIVENLKVK--NELFKRLDKFAAEHTIFASNTSSL--QITSIANATTRQDRFAGLHF 159 (302)
T ss_dssp HTEEEESCHHHHTTSCS--EEEECCCSCHHHH--HHHHHHHTTTSCTTCEEEECCSSS--CHHHHHTTSSCGGGEEEEEE
T ss_pred hceEEecCHHHhhcCCC--EEEEcCcCcHHHH--HHHHHHHHhhCCCCeEEEECCCCC--CHHHHHHhcCCcccEEEEec
Confidence 47899999999997766 9999999999999 999999999999999999999998 66665 56788999999999
Q ss_pred cCCCCCCcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEEeccCchhHHHHHHHHHHHHHHHHHcCC-CHHHHHHHHH-h
Q psy9059 131 FSPVDKMQLLEIITTEQTSQDTAASAVAVGLKQGKVVITVKDGPGFYTTRILSTMLSEAMRILQEGT-SPKDLDRLTK-Q 208 (269)
Q Consensus 131 fnP~~~~~lVEiv~~~~Ts~e~~~~~~~~~~~lGk~pv~vkd~pGfI~nRll~al~~EA~~lv~eGi-s~edID~a~~-g 208 (269)
+||++.++++||++++.|++++++.+.++++.+|+.|++++|.|||++||++.+++|||++++++|+ ++++||.+++ |
T Consensus 160 ~~P~~~~~~~~i~~g~~~~~e~~~~~~~l~~~~G~~~v~~~~~~g~i~nr~l~~~~~Ea~~l~~~g~~~~~~id~~~~~g 239 (302)
T 1f0y_A 160 FNPVPVMKLVEVIKTPMTSQKTFESLVDFSKALGKHPVSCKDTPGFIVNRLLVPYLMEAIRLYERGDASKEDIDTAMKLG 239 (302)
T ss_dssp CSSTTTCCEEEEECCTTCCHHHHHHHHHHHHHTTCEEEEECSCTTTTHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHH
T ss_pred CCCcccCceEEEeCCCCCCHHHHHHHHHHHHHcCCceEEecCcccccHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999999999999999999999999999999998 9999999998 9
Q ss_pred cCCCchhhHHHHhhchHHHHHHHHHHHHHh-CC-CCCCChhHHHHHHHHcCCCCCCCCCccCC
Q psy9059 209 FGFPVGAATLSDEVGIDVGAHIAKDLSKTF-GD-RFSGGNLNVLNEMVEKGYLDFKNKDGYYP 269 (269)
Q Consensus 209 ~G~p~GPf~~~D~~Gld~~~~~~~~l~~~~-g~-~~~~~~~~lL~~lv~~G~lG~ksG~GFY~ 269 (269)
+|+|+|||+++|.+|+|.+.++++++++.+ |+ +|+ |+++|++|+++|++|+|||+|||+
T Consensus 240 ~g~p~GP~~~~D~~Gld~~~~~~~~l~~~~~~~~~~~--~~~~l~~~~~~g~~G~k~g~Gfy~ 300 (302)
T 1f0y_A 240 AGYPMGPFELLDYVGLDTTKFIVDGWHEMDAENPLHQ--PSPSLNKLVAENKFGKKTGEGFYK 300 (302)
T ss_dssp HCCSSCHHHHHHHHCHHHHHHHHHHHHHTTTTCGGGC--CCHHHHHHHHTTCCBTTTTBSSSB
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHccCCCccC--cCHHHHHHHHcCCCccccCcEeee
Confidence 999999999999999999999999999988 77 487 579999999999999999999995
No 8
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=100.00 E-value=4.5e-47 Score=385.41 Aligned_cols=209 Identities=26% Similarity=0.420 Sum_probs=185.9
Q ss_pred CcCeEEecCHHHHhcCCCCceEEeecCCCcCCCchhHHHHHHHhcCCCCcEEecCCCCCccccccc-CCCCCCCeEEEee
Q psy9059 51 HTGITYLYTYSERLMGSNGLAMVFPLQEQIPIQTPQQMSERIYMYTYSERLMGSNGLAMVFPLQEQ-IPIQTPHLIIGMH 129 (269)
Q Consensus 51 ~~~l~~~~~~~~a~~~~~~~~V~E~vpE~l~~K~k~~l~~~l~~~~~~~~iiaSnTS~l~~p~~~~-~~~~~p~R~i~~H 129 (269)
.+++++++|+ ++++++| +|+|||||++++| +++|++|++++++++||+||||++ |++.+ +.+.+|+|++++|
T Consensus 377 ~~~i~~~~d~-~~~~~aD--lVIeaVpe~~~vk--~~v~~~l~~~~~~~~IlasntStl--~i~~la~~~~~p~~~iG~h 449 (725)
T 2wtb_A 377 MSLLKGSLDY-ESFRDVD--MVIEAVIENISLK--QQIFADLEKYCPQHCILASNTSTI--DLNKIGERTKSQDRIVGAH 449 (725)
T ss_dssp TTSEEEESSS-GGGTTCS--EEEECCCSCHHHH--HHHHHHHHHHSCTTCEEEECCSSS--CHHHHTTTCSCTTTEEEEE
T ss_pred hcceEEeCCH-HHHCCCC--EEEEcCcCCHHHH--HHHHHHHHhhCCCCcEEEeCCCCC--CHHHHHHHhcCCCCEEEec
Confidence 4678999999 6786655 9999999999999 999999999999999999999998 67765 5678999999999
Q ss_pred ccCCCCCCcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEEeccCchhHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhc
Q psy9059 130 YFSPVDKMQLLEIITTEQTSQDTAASAVAVGLKQGKVVITVKDGPGFYTTRILSTMLSEAMRILQEGTSPKDLDRLTKQF 209 (269)
Q Consensus 130 ffnP~~~~~lVEiv~~~~Ts~e~~~~~~~~~~~lGk~pv~vkd~pGfI~nRll~al~~EA~~lv~eGis~edID~a~~g~ 209 (269)
||||++.++++||++|+.|++++++++.++++.+||.|++++|.|||++||++.++++||+.++++|+++++||.++.++
T Consensus 450 f~~P~~~~~lvevv~g~~t~~e~~~~~~~l~~~lGk~~v~v~d~~Gfi~Nril~~~~~Ea~~l~~~G~~~e~id~~~~~~ 529 (725)
T 2wtb_A 450 FFSPAHIMPLLEIVRTNHTSAQVIVDLLDVGKKIKKTPVVVGNCTGFAVNRMFFPYTQAAMFLVECGADPYLIDRAISKF 529 (725)
T ss_dssp ECSSTTTCCEEEEEECSSCCHHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred CCCCcccCceEEEEECCCCCHHHHHHHHHHHHHhCCEEEEECCCccHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCchhhHHHHhhchHHHHHHHHHHHHHhCCC-CCCChhHHHHHHHHcCCCCCCCCCccCC
Q psy9059 210 GFPVGAATLSDEVGIDVGAHIAKDLSKTFGDR-FSGGNLNVLNEMVEKGYLDFKNKDGYYP 269 (269)
Q Consensus 210 G~p~GPf~~~D~~Gld~~~~~~~~l~~~~g~~-~~~~~~~lL~~lv~~G~lG~ksG~GFY~ 269 (269)
|+|||||+++|++|+|+..++++.+++.++++ |. + +++++|+++|++|+|||+|||+
T Consensus 530 g~p~Gp~~l~D~vGld~~~~i~~~~~~~~~~~~~~--~-~~l~~~v~~g~lG~k~g~GfY~ 587 (725)
T 2wtb_A 530 GMPMGPFRLCDLVGFGVAIATATQFIENFSERTYK--S-MIIPLMQEDKRAGEATRKGFYL 587 (725)
T ss_dssp TCSSCHHHHHHHHCHHHHHHHHHHHHHHSGGGCCC--C-THHHHHHTTC------------
T ss_pred CCCCCHHHHHHHhchHHHHHHHHHHHHhcCCccCC--h-HHHHHHHHCCCceecCCceeEe
Confidence 99999999999999999999999999988877 76 4 8899999999999999999995
No 9
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=100.00 E-value=4.8e-47 Score=384.73 Aligned_cols=209 Identities=28% Similarity=0.484 Sum_probs=197.2
Q ss_pred cCeEEecCHHHHhcCCCCceEEeecCCCcCCCchhHHHHHHHhcCCCCcEEecCCCCCccccccc-CCCCCCCeEEEeec
Q psy9059 52 TGITYLYTYSERLMGSNGLAMVFPLQEQIPIQTPQQMSERIYMYTYSERLMGSNGLAMVFPLQEQ-IPIQTPHLIIGMHY 130 (269)
Q Consensus 52 ~~l~~~~~~~~a~~~~~~~~V~E~vpE~l~~K~k~~l~~~l~~~~~~~~iiaSnTS~l~~p~~~~-~~~~~p~R~i~~Hf 130 (269)
+++++++|+ ++++++| +|+|||||++++| +++|++|++++++++||+||||++ |++.+ +.+.+|+|++++||
T Consensus 380 ~~i~~~~d~-~~~~~aD--lVIeaV~e~~~vk--~~v~~~l~~~~~~~~IlasntStl--~i~~la~~~~~~~~~ig~hf 452 (715)
T 1wdk_A 380 NGIRPTLSY-GDFGNVD--LVVEAVVENPKVK--QAVLAEVENHVREDAILASNTSTI--SISLLAKALKRPENFVGMHF 452 (715)
T ss_dssp HHEEEESSS-TTGGGCS--EEEECCCSCHHHH--HHHHHHHHTTSCTTCEEEECCSSS--CHHHHGGGCSCGGGEEEEEC
T ss_pred cCeEEECCH-HHHCCCC--EEEEcCCCCHHHH--HHHHHHHHhhCCCCeEEEeCCCCC--CHHHHHHHhcCccceEEEEc
Confidence 468899999 7887766 9999999999999 999999999999999999999998 67765 56789999999999
Q ss_pred cCCCCCCcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEEeccCchhHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcC
Q psy9059 131 FSPVDKMQLLEIITTEQTSQDTAASAVAVGLKQGKVVITVKDGPGFYTTRILSTMLSEAMRILQEGTSPKDLDRLTKQFG 210 (269)
Q Consensus 131 fnP~~~~~lVEiv~~~~Ts~e~~~~~~~~~~~lGk~pv~vkd~pGfI~nRll~al~~EA~~lv~eGis~edID~a~~g~G 210 (269)
|||++.++++||++++.|++++++.+.++++.+||.|++++|.|||++||++.++++||+.++++|+++++||.++.++|
T Consensus 453 ~~P~~~~~lvevv~g~~t~~e~~~~~~~l~~~lGk~~v~v~d~~Gfi~Nril~~~~~Ea~~l~~~G~~~~~id~~~~~~G 532 (715)
T 1wdk_A 453 FNPVHMMPLVEVIRGEKSSDLAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKVMEKFG 532 (715)
T ss_dssp CSSTTTCCEEEEEECSSCCHHHHHHHHHHHHHTTCEEEEEESCTTTTHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHT
T ss_pred cCCcccCceEEEEECCCCCHHHHHHHHHHHHHhCCEeEEEcCCCChhhhHHHHHHHHHHHHHHHCCCCHHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCchhhHHHHhhchHHHHHHHHHHHHHhCCCCCCChh--HHHHHHHHcCCCCCCCCCccCC
Q psy9059 211 FPVGAATLSDEVGIDVGAHIAKDLSKTFGDRFSGGNL--NVLNEMVEKGYLDFKNKDGYYP 269 (269)
Q Consensus 211 ~p~GPf~~~D~~Gld~~~~~~~~l~~~~g~~~~~~~~--~lL~~lv~~G~lG~ksG~GFY~ 269 (269)
+|||||+++|++|+|+..++++.+++.++++|. ++ +++++|+++|++|+|||+|||+
T Consensus 533 ~p~Gp~~l~D~vGld~~~~i~~~~~~~~~~~~~--~~~~~~l~~~v~~g~lG~k~g~GfY~ 591 (715)
T 1wdk_A 533 WPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMK--DDRRSAIDALYEAKRLGQKNGKGFYA 591 (715)
T ss_dssp CSSCHHHHHHHHCHHHHHHHHHHHHHHCHHHHC--CSSCCHHHHHHHTTCCBTTTTBSSSE
T ss_pred CCCCHHHHHHHhhHHHHHHHHHHHHHhcCCccC--CChHHHHHHHHhCchhhhcCCcEEEe
Confidence 999999999999999999999999988888777 45 7999999999999999999995
No 10
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=100.00 E-value=2.2e-44 Score=348.72 Aligned_cols=207 Identities=25% Similarity=0.446 Sum_probs=186.5
Q ss_pred eEEecCHHHHhcCCCCceEEeecCCCcCCCchhHHHHHHHhcCCCCcEEecCCCCCccccccc-CCCCCCCeEEEeeccC
Q psy9059 54 ITYLYTYSERLMGSNGLAMVFPLQEQIPIQTPQQMSERIYMYTYSERLMGSNGLAMVFPLQEQ-IPIQTPHLIIGMHYFS 132 (269)
Q Consensus 54 l~~~~~~~~a~~~~~~~~V~E~vpE~l~~K~k~~l~~~l~~~~~~~~iiaSnTS~l~~p~~~~-~~~~~p~R~i~~Hffn 132 (269)
.+.++++ +++.++| +|+|||||++++| +++|++|++++++++||+||||++ +++.+ +.+.+|+|++++||||
T Consensus 103 ~~i~~~~-~~~~~aD--lVIeaVpe~~~~k--~~v~~~l~~~~~~~~ii~snTs~~--~~~~la~~~~~~~~~ig~hf~~ 175 (463)
T 1zcj_A 103 LRFSSST-KELSTVD--LVVEAVFEDMNLK--KKVFAELSALCKPGAFLCTNTSAL--NVDDIASSTDRPQLVIGTHFFS 175 (463)
T ss_dssp EEEESCG-GGGTTCS--EEEECCCSCHHHH--HHHHHHHHHHSCTTCEEEECCSSS--CHHHHHTTSSCGGGEEEEEECS
T ss_pred hhhcCCH-HHHCCCC--EEEEcCCCCHHHH--HHHHHHHHhhCCCCeEEEeCCCCc--CHHHHHHHhcCCcceEEeecCC
Confidence 4457777 6776655 9999999999999 999999999999999999999998 66664 5778999999999999
Q ss_pred CCCCCcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEEeccCchhHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcCCC
Q psy9059 133 PVDKMQLLEIITTEQTSQDTAASAVAVGLKQGKVVITVKDGPGFYTTRILSTMLSEAMRILQEGTSPKDLDRLTKQFGFP 212 (269)
Q Consensus 133 P~~~~~lVEiv~~~~Ts~e~~~~~~~~~~~lGk~pv~vkd~pGfI~nRll~al~~EA~~lv~eGis~edID~a~~g~G~p 212 (269)
|++.++++||++|+.|++++++++..+++.+||.|+++++.|||++||++.++++||++++++|+++++||.+++++|+|
T Consensus 176 P~~~~~lvevv~g~~t~~e~~~~~~~l~~~lGk~~v~v~~~~gfi~Nrll~~~~~ea~~l~~~G~~~~~id~~~~~~g~p 255 (463)
T 1zcj_A 176 PAHVMRLLEVIPSRYSSPTTIATVMSLSKKIGKIGVVVGNCYGFVGNRMLAPYYNQGFFLLEEGSKPEDVDGVLEEFGFK 255 (463)
T ss_dssp STTTCCEEEEEECSSCCHHHHHHHHHHHHHTTCEEEEBCCSTTTTHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTCS
T ss_pred CcccceeEEEeCCCCCCHHHHHHHHHHHHHhCCEEEEECCCccHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhHHHHhhchHHHHHHHHHHH---HH-------hC-CCCCCChhHHHHHHHHcCCCCCCCCCccCC
Q psy9059 213 VGAATLSDEVGIDVGAHIAKDLS---KT-------FG-DRFSGGNLNVLNEMVEKGYLDFKNKDGYYP 269 (269)
Q Consensus 213 ~GPf~~~D~~Gld~~~~~~~~l~---~~-------~g-~~~~~~~~~lL~~lv~~G~lG~ksG~GFY~ 269 (269)
+|||+++|.+|+|+..++++.+. +. .+ ..++ +++++++|+++|++|+|||+|||+
T Consensus 256 ~Gp~~l~D~~GlD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~v~~g~lG~k~g~Gfy~ 321 (463)
T 1zcj_A 256 MGPFRVSDLAGLDVGWKIRKGQGLTGPSLPPGTPVRKRGNSR--YSPLGDMLCEAGRFGQKTGKGWYQ 321 (463)
T ss_dssp SCHHHHHHHHCHHHHHHHHHHTTSSSSCCCTTCCTTEETTEE--CCTHHHHHHHTTCCBGGGTBSSEE
T ss_pred CcHHHHHHHcchHHHHHHHHHHhhhccccccccccccccccc--chHHHHHHHHCCCCeeecCCeecc
Confidence 99999999999999999998772 11 11 1112 357999999999999999999995
No 11
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=100.00 E-value=1.2e-40 Score=309.23 Aligned_cols=178 Identities=20% Similarity=0.247 Sum_probs=166.1
Q ss_pred cCeEEecCHHHHhcCCCCceEEeecCCCcCCCchhHHHHHHHhcCCCCcEEecCCCCCccccccc-CCCCCCCeEEEeec
Q psy9059 52 TGITYLYTYSERLMGSNGLAMVFPLQEQIPIQTPQQMSERIYMYTYSERLMGSNGLAMVFPLQEQ-IPIQTPHLIIGMHY 130 (269)
Q Consensus 52 ~~l~~~~~~~~a~~~~~~~~V~E~vpE~l~~K~k~~l~~~l~~~~~~~~iiaSnTS~l~~p~~~~-~~~~~p~R~i~~Hf 130 (269)
+++++++|++|+++++| +|||||||++++| +++|++|++++++++||+||||++ +++.+ +.+.+|+|++++||
T Consensus 73 ~~i~~~~~~~eav~~aD--lVieavpe~~~~k--~~v~~~l~~~~~~~~Ii~s~tS~i--~~~~la~~~~~~~r~ig~Hp 146 (319)
T 2dpo_A 73 SLISSCTNLAEAVEGVV--HIQECVPENLDLK--RKIFAQLDSIVDDRVVLSSSSSCL--LPSKLFTGLAHVKQCIVAHP 146 (319)
T ss_dssp HTEEEECCHHHHTTTEE--EEEECCCSCHHHH--HHHHHHHHTTCCSSSEEEECCSSC--CHHHHHTTCTTGGGEEEEEE
T ss_pred hceEEeCCHHHHHhcCC--EEEEeccCCHHHH--HHHHHHHHhhCCCCeEEEEeCCCh--HHHHHHHhcCCCCCeEEeec
Confidence 57899999999997766 9999999999999 999999999999999999999998 66675 67889999999999
Q ss_pred cCCCCCCcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEE-eccCchhHHHHHHHHHHHHHHHHHcCC-CHHHHHHHHH-
Q psy9059 131 FSPVDKMQLLEIITTEQTSQDTAASAVAVGLKQGKVVITV-KDGPGFYTTRILSTMLSEAMRILQEGT-SPKDLDRLTK- 207 (269)
Q Consensus 131 fnP~~~~~lVEiv~~~~Ts~e~~~~~~~~~~~lGk~pv~v-kd~pGfI~nRll~al~~EA~~lv~eGi-s~edID~a~~- 207 (269)
|||++.++++||++++.|++++++++..+++.+||.|+++ +|.|||++||++.++++||++++++|+ |+++||.+++
T Consensus 147 ~~P~~~~~lveiv~g~~t~~e~~~~~~~l~~~lGk~~v~v~~~~~Gfi~Nrll~a~~~EA~~l~~~g~~~~~~id~a~~~ 226 (319)
T 2dpo_A 147 VNPPYYIPLVELVPHPETSPATVDRTHALMRKIGQSPVRVLKEIDGFVLNRLQYAIISEAWRLVEEGIVSPSDLDLVMSD 226 (319)
T ss_dssp CSSTTTCCEEEEEECTTCCHHHHHHHHHHHHHTTCEEEECSSCCTTTTHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHT
T ss_pred CCchhhcceEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEECCCcCCchHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999 899999999999999999999999999 9999999998
Q ss_pred hcCCC---chhhHHHHhhchHHHHHHHHHHHH
Q psy9059 208 QFGFP---VGAATLSDEVGIDVGAHIAKDLSK 236 (269)
Q Consensus 208 g~G~p---~GPf~~~D~~Gld~~~~~~~~l~~ 236 (269)
|+|+| +|||+++|++| +.+.+.++++.+
T Consensus 227 g~g~~~a~~GP~~~~dl~g-~g~~~~~~~~~~ 257 (319)
T 2dpo_A 227 GLGMRYAFIGPLETMHLNA-EGMLSYSDRYSE 257 (319)
T ss_dssp THHHHHTTSCHHHHHHHTT-TSHHHHHHHHHH
T ss_pred CCCCCccccCHHHHHHhcC-chHHHHHHHHhH
Confidence 99998 89999999998 766666666543
No 12
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=99.96 E-value=7.4e-30 Score=248.58 Aligned_cols=155 Identities=18% Similarity=0.291 Sum_probs=139.2
Q ss_pred cEEecCCCCCcccccccCCCCCCCeEEEeeccCCCCCCcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEEeccCchhHH
Q psy9059 100 RLMGSNGLAMVFPLQEQIPIQTPHLIIGMHYFSPVDKMQLLEIITTEQTSQDTAASAVAVGLKQGKVVITVKDGPGFYTT 179 (269)
Q Consensus 100 ~iiaSnTS~l~~p~~~~~~~~~p~R~i~~HffnP~~~~~lVEiv~~~~Ts~e~~~~~~~~~~~lGk~pv~vkd~pGfI~n 179 (269)
.+++ .|++. +.+.. ...+|+|++++|++| +++|||++++.|++++++++.+|++++||.|+.++|.||||+|
T Consensus 320 ~~~~-~~~~~--~~~~~-~~~~~~~~v~~~~~~----~~~vev~~~~~t~~~~~~~~~~~~~~~gk~~~~~~d~~g~i~~ 391 (483)
T 3mog_A 320 VLLI-ETQGE--TAQAL-AIRLARPVVVIDKMA----GKVVTIAAAAVNPDSATRKAIYYLQQQGKTVLQIADYPGMLIW 391 (483)
T ss_dssp EEEE-ECSSS--CHHHH-HHHHTSCEEEEECCS----SSEEEEEECTTSCHHHHHHHHHHHHTTTCEEEECCCCTTTTHH
T ss_pred hhhc-ccCCc--chHHH-hhccccceeeeeccc----cceEEEecCCCCCHHHHHHHHHHHHHcCCceeeecccccHHHH
Confidence 3444 56665 55544 567899999999999 7899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHcCC-CHHHHHHHHH-hcCCCchhhHHHHhhchHHHHHHHHHHHHHhCC-CCCCChhHHHHHHHHc
Q psy9059 180 RILSTMLSEAMRILQEGT-SPKDLDRLTK-QFGFPVGAATLSDEVGIDVGAHIAKDLSKTFGD-RFSGGNLNVLNEMVEK 256 (269)
Q Consensus 180 Rll~al~~EA~~lv~eGi-s~edID~a~~-g~G~p~GPf~~~D~~Gld~~~~~~~~l~~~~g~-~~~~~~~~lL~~lv~~ 256 (269)
|++.+++|||+++++||| |++|||.+|+ |+|||+|||+++|.+|+|.+.++++.+++.+|+ +|+ |+++|++|+++
T Consensus 392 Rll~~~~nEA~~~l~eGvas~~diD~a~~~G~G~P~GPl~~~D~~Gld~~~~~~~~l~~~~g~~~~~--p~~lL~~~v~~ 469 (483)
T 3mog_A 392 RTVAMIINEALDALQKGVASEQDIDTAMRLGVNYPYGPLAWGAQLGWQRILRLLENLQHHYGEERYR--PCSLLRQRALL 469 (483)
T ss_dssp HHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHSCCSSCHHHHHHHHCHHHHHHHHHHHHHHHCCGGGC--CCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCCHHHHHHHHHhCCCCCCCHHHHHHHhCHHHHHHHHHHHHHHhCCCCCC--CCHHHHHHHHc
Confidence 999999999999999999 9999999998 999999999999999999999999999999986 898 67999999999
Q ss_pred CCCCCCCC
Q psy9059 257 GYLDFKNK 264 (269)
Q Consensus 257 G~lG~ksG 264 (269)
|++|..-|
T Consensus 470 G~~~~~~~ 477 (483)
T 3mog_A 470 ESGYESEG 477 (483)
T ss_dssp HTCC----
T ss_pred CCCCCCCC
Confidence 99987655
No 13
>3ctv_A HBD-10, 3-hydroxyacyl-COA dehydrogenase; structural genomics, APC7539, PSI-2, protein structure initiative; 2.46A {Archaeoglobus fulgidus dsm 4304}
Probab=99.95 E-value=2.3e-29 Score=199.63 Aligned_cols=103 Identities=23% Similarity=0.376 Sum_probs=86.3
Q ss_pred hCCcEEE-EEeccCchhHHHHHHHHHHHHHHHHHcCC-CHHHHHHHHH-hcCCCchhhHHHHhhchHHHHHHHHHHHHHh
Q psy9059 162 KQGKVVI-TVKDGPGFYTTRILSTMLSEAMRILQEGT-SPKDLDRLTK-QFGFPVGAATLSDEVGIDVGAHIAKDLSKTF 238 (269)
Q Consensus 162 ~lGk~pv-~vkd~pGfI~nRll~al~~EA~~lv~eGi-s~edID~a~~-g~G~p~GPf~~~D~~Gld~~~~~~~~l~~~~ 238 (269)
.++|.|| .++|.||||+||++.+++|||++++++|+ |++|||.+|+ |+|||+|||+++|.+|+|++.++++++++.+
T Consensus 3 ~~~K~~v~~~~d~~gfi~nRll~~~~~eA~~ll~eGva~~~dID~a~~~g~G~p~GPf~~~D~~Gld~~~~~~~~l~~~~ 82 (110)
T 3ctv_A 3 SKGRPQIDSSKATDKINPMDFTFVEINEAVKLVEMGVATPQDIDTAIKLGLNRPFGPFELAKQFGAEQIAKRLEELAKQF 82 (110)
T ss_dssp --------------CCCHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHTTCSSCHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred CCCCCCcccCCCCccHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4689999 77999999999999999999999999999 9999999998 9999999999999999999999999999999
Q ss_pred CC-CCCCChhHHHHHHHHcCCCCCCCCCc
Q psy9059 239 GD-RFSGGNLNVLNEMVEKGYLDFKNKDG 266 (269)
Q Consensus 239 g~-~~~~~~~~lL~~lv~~G~lG~ksG~G 266 (269)
|+ +|. ++++|++|+++|++|+|||+|
T Consensus 83 g~~~~~--p~~~L~~~v~~G~lG~k~g~G 109 (110)
T 3ctv_A 83 GKKIFE--PAKTLKEGKLEELLKAGKAEG 109 (110)
T ss_dssp CCGGGS--CCHHHHTTTHHHHHHHHHHC-
T ss_pred CCCcCC--CCHHHHHHHHcCCCCccCCCC
Confidence 98 787 679999999999999999998
No 14
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=99.75 E-value=1.8e-18 Score=167.19 Aligned_cols=110 Identities=19% Similarity=0.255 Sum_probs=100.6
Q ss_pred CCCCHHHHHHHHHHHHhCCcEEEEEeccCchhHHHHHHHHHHHHHHHHHcCC--CHHHHHHHHH-hcCCCc---hhhHHH
Q psy9059 146 EQTSQDTAASAVAVGLKQGKVVITVKDGPGFYTTRILSTMLSEAMRILQEGT--SPKDLDRLTK-QFGFPV---GAATLS 219 (269)
Q Consensus 146 ~~Ts~e~~~~~~~~~~~lGk~pv~vkd~pGfI~nRll~al~~EA~~lv~eGi--s~edID~a~~-g~G~p~---GPf~~~ 219 (269)
..|++++.+.+.++.+.+|+.|+.++ +|+|+||++.+++|||+++++||| +++|||.+|+ |+|||+ |||+++
T Consensus 330 ~~~~~~~~~~~~~~~~~~g~~~~~~~--~g~i~~Rll~~~~nEa~~~l~eGIa~~~~dID~a~~~G~G~p~~~gGP~~~~ 407 (463)
T 1zcj_A 330 HKPDPWLSTFLSQYREVHHIEQRTIS--KEEILERCLYSLINEAFRILEEGMAARPEHIDVIYLHGYGWPRHKGGPMFYA 407 (463)
T ss_dssp EEECHHHHHHHHHHHHHTTCCCCCCC--HHHHHHHHHHHHHHHHHHHHHTTSBSCHHHHHHHHHHHSCCCGGGCCHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCCcccCC--HHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHhCCCCCCCCcChHHHH
Confidence 35899999999999888898776553 799999999999999999999999 5999999998 999998 999999
Q ss_pred HhhchHHHHHHHHHHHHHhCC--CCCCChhHHHHHHHHcCCC
Q psy9059 220 DEVGIDVGAHIAKDLSKTFGD--RFSGGNLNVLNEMVEKGYL 259 (269)
Q Consensus 220 D~~Gld~~~~~~~~l~~~~g~--~~~~~~~~lL~~lv~~G~l 259 (269)
|.+|++.+.++++.+++.+|+ +|+ |+++|++|+++|+.
T Consensus 408 D~~Gl~~~~~~~~~l~~~~g~~~~~~--p~~lL~~~v~~G~~ 447 (463)
T 1zcj_A 408 ASVGLPTVLEKLQKYYRQNPDIPQLE--PSDYLRRLVAQGSP 447 (463)
T ss_dssp HHHCHHHHHHHHHHHHHHCTTCGGGS--CCHHHHHHHHTTCC
T ss_pred HHhCHHHHHHHHHHHHHHhCCCccCC--CCHHHHHHHHcCCC
Confidence 999999999999999999998 788 67999999998873
No 15
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=99.57 E-value=4.6e-16 Score=150.62 Aligned_cols=89 Identities=17% Similarity=0.191 Sum_probs=74.2
Q ss_pred chhHHHHHHHHHHHHHHHHHcCC--CHHHHHHHHH-hcCCCc---hhhHHHHhhchHHHHHHHHHHHHHhCCC--CCCCh
Q psy9059 175 GFYTTRILSTMLSEAMRILQEGT--SPKDLDRLTK-QFGFPV---GAATLSDEVGIDVGAHIAKDLSKTFGDR--FSGGN 246 (269)
Q Consensus 175 GfI~nRll~al~~EA~~lv~eGi--s~edID~a~~-g~G~p~---GPf~~~D~~Gld~~~~~~~~l~~~~g~~--~~~~~ 246 (269)
..|.+|++.+++|||+++++||| +++|||.+|. |+|||. |||+++|.+|++.+.+.++.+.+.+|++ |+ |
T Consensus 356 ~~i~~r~l~~~~nea~~~l~egi~~~~~diD~~~~~G~GfP~~~GGp~~~~d~~G~~~~~~~l~~l~~~~g~~~~~~--p 433 (460)
T 3k6j_A 356 QDVINFMLYPTVNEGYRCIEEGVISNESLIDIMFILGFGWPIHSGGPMRFGKTEGLDKIANMLVHWSSLEPKESAYI--V 433 (460)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHTCCCSEETTEECBCSSCBSSHHHHHHHHHHHHHCTTCGGGS--C
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCcchhhhHHHHhcCCCCccccCHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCC--C
Confidence 57899999999999999999999 6999999998 999997 9999999999999999999999999997 88 6
Q ss_pred hHHHHHHHHcCCCCCCCCC
Q psy9059 247 LNVLNEMVEKGYLDFKNKD 265 (269)
Q Consensus 247 ~~lL~~lv~~G~lG~ksG~ 265 (269)
+++|.+|+++|++|.|||.
T Consensus 434 ~~~L~~~a~~g~~~~~~~~ 452 (460)
T 3k6j_A 434 ADALKTANVSTGSSGSSGG 452 (460)
T ss_dssp CHHHHHHC-----------
T ss_pred CHHHHHHHHcCCCccccCC
Confidence 8999999999999999994
No 16
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=99.55 E-value=1.1e-16 Score=147.14 Aligned_cols=142 Identities=12% Similarity=0.139 Sum_probs=121.6
Q ss_pred CcCeEEecCHHHHhcCCCCceEEeec--------------CCCcCCCchhHHHHHHHhcCCCCcEE--ecCCCCCccccc
Q psy9059 51 HTGITYLYTYSERLMGSNGLAMVFPL--------------QEQIPIQTPQQMSERIYMYTYSERLM--GSNGLAMVFPLQ 114 (269)
Q Consensus 51 ~~~l~~~~~~~~a~~~~~~~~V~E~v--------------pE~l~~K~k~~l~~~l~~~~~~~~ii--aSnTS~l~~p~~ 114 (269)
..+++.+.++ ++++++| +|++++ +|+.++| ++++++|+++++ ++++ +||+|++ ...
T Consensus 58 ~~~i~~t~d~-~a~~~aD--iVi~avg~p~~~g~~r~d~~~~~~~i~--~~i~~~i~~~~~-~~iii~~sNp~~~--~~~ 129 (317)
T 2ewd_A 58 TSKVIGTDDY-ADISGSD--VVIITASIPGRPKDDRSELLFGNARIL--DSVAEGVKKYCP-NAFVICITNPLDV--MVS 129 (317)
T ss_dssp CCCEEEESCG-GGGTTCS--EEEECCCCSSCCSSCGGGGHHHHHHHH--HHHHHHHHHHCT-TSEEEECCSSHHH--HHH
T ss_pred CcEEEECCCH-HHhCCCC--EEEEeCCCCCCCCCcHHHHHHhhHHHH--HHHHHHHHHHCC-CcEEEEeCChHHH--HHH
Confidence 3578888888 8887766 999999 8888999 999999999986 8888 9999987 444
Q ss_pred cc-CCCCC-CCeEEEeeccCCCCCCcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEEeccCchhHHH---HHHHHHHHH
Q psy9059 115 EQ-IPIQT-PHLIIGMHYFSPVDKMQLLEIITTEQTSQDTAASAVAVGLKQGKVVITVKDGPGFYTTR---ILSTMLSEA 189 (269)
Q Consensus 115 ~~-~~~~~-p~R~i~~HffnP~~~~~lVEiv~~~~Ts~e~~~~~~~~~~~lGk~pv~vkd~pGfI~nR---ll~al~~EA 189 (269)
.+ ....+ |+|++|+ .|+.++......+++++|+.| +|++|||+|| .+.++|++|
T Consensus 130 ~~~~~~~~~~~rviG~------------------~t~ld~~r~~~~la~~lg~~~---~~v~~~v~g~Hg~~~~~~~~~a 188 (317)
T 2ewd_A 130 HFQKVSGLPHNKVCGM------------------AGVLDSSRFRTFIAQHFGVNA---SDVSANVIGGHGDGMVPATSSV 188 (317)
T ss_dssp HHHHHHCCCGGGEEES------------------CHHHHHHHHHHHHHHHHTSCG---GGEECCEEBCSSTTCEECGGGC
T ss_pred HHHHhhCCCHHHEEec------------------cCcHHHHHHHHHHHHHhCcCh---hhceEEEEecCCCceeEEeecc
Confidence 43 34455 7899976 488999988999999999874 8999999999 999999999
Q ss_pred -------HHHHHcCC-CHHHHHHHHH-hcCCCchhhHHHHhhch
Q psy9059 190 -------MRILQEGT-SPKDLDRLTK-QFGFPVGAATLSDEVGI 224 (269)
Q Consensus 190 -------~~lv~eGi-s~edID~a~~-g~G~p~GPf~~~D~~Gl 224 (269)
..++++|+ +++++|.+++ + ++|||+++|..|.
T Consensus 189 ~v~g~~~~~~~~~g~~~~~~id~~~~~~---~~~~~ei~~~~g~ 229 (317)
T 2ewd_A 189 SVGGVPLSSFIKQGLITQEQIDEIVCHT---RIAWKEVADNLKT 229 (317)
T ss_dssp EETTEEHHHHHHTTSSCHHHHHHHHHHH---HHHHHHHHHHHSS
T ss_pred ccCCEEHHHHHhccCCCHHHHHHHHHHH---HhhHHHHHHhhcC
Confidence 89999998 9999999987 5 7899999998776
No 17
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=99.54 E-value=9.6e-15 Score=148.62 Aligned_cols=118 Identities=19% Similarity=0.231 Sum_probs=98.2
Q ss_pred CCHHHHHHHHHHHHhCCcEEEEEeccCchhHHHHHHHHHHHHHHHHHcCC--CHHHHHHHHH-hcCCCc---hhhHHHHh
Q psy9059 148 TSQDTAASAVAVGLKQGKVVITVKDGPGFYTTRILSTMLSEAMRILQEGT--SPKDLDRLTK-QFGFPV---GAATLSDE 221 (269)
Q Consensus 148 Ts~e~~~~~~~~~~~lGk~pv~vkd~pGfI~nRll~al~~EA~~lv~eGi--s~edID~a~~-g~G~p~---GPf~~~D~ 221 (269)
.++++.+...++....+..+-.+ ....|.+|++.+++|||+++++||| +++|||.+|+ |+|||. |||+++|.
T Consensus 611 ~~~~~~~~~~~~~~~~~~~~~~~--~~~ei~~R~l~~~~nEa~~~l~egI~~~~~diD~a~~~G~Gfp~~~GGp~~~~D~ 688 (742)
T 3zwc_A 611 PDPWLSTFLSQYREVHHIEQRTI--SKEEILERCLYSLINEAFRILEEGMAARPEHIDVIYLHGYGWPRHKGGPMFYAAS 688 (742)
T ss_dssp CCHHHHHHHHHHHHHHTCCCCCC--CHHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHSCCCGGGCCHHHHHHH
T ss_pred CChHHHHHHHHHhhhcCCCcCCC--CHHHHHHHHHHHHHHHHHHHhhcCcCCCHHHHHHHHHhCcCCCCCcCCHHHHHHH
Confidence 35666555555544333222222 1246899999999999999999998 8999999998 999997 99999999
Q ss_pred hchHHHHHHHHHHHHHhCC--CCCCChhHHHHHHHHcCCCCCCCCCccCC
Q psy9059 222 VGIDVGAHIAKDLSKTFGD--RFSGGNLNVLNEMVEKGYLDFKNKDGYYP 269 (269)
Q Consensus 222 ~Gld~~~~~~~~l~~~~g~--~~~~~~~~lL~~lv~~G~lG~ksG~GFY~ 269 (269)
+|++.+.+.|+.+.+.+|+ +|+ |+++|++|+++|....+.++|||.
T Consensus 689 ~G~~~~v~~l~~l~~~~g~~~~~~--P~~~L~~ma~~G~~~f~~~~~~~~ 736 (742)
T 3zwc_A 689 VGLPTVLEKLQKYYRQNPDIPQLE--PSDYLRRLVAQGSPPLKEWQSLAG 736 (742)
T ss_dssp HCHHHHHHHHHHHHHHCTTCGGGS--CCHHHHHHHHTTCCCGGGHHHHHS
T ss_pred HHHHHHHHHHHHHHHHcCCCCccC--CCHHHHHHHHcCCCcccccccccC
Confidence 9999999999999999996 787 689999999999999999999984
No 18
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=99.41 E-value=2.6e-13 Score=137.62 Aligned_cols=86 Identities=21% Similarity=0.384 Sum_probs=79.0
Q ss_pred CchhHHHHHHHHHHHHHHHHHcCC--CHHHHHHHHH-hcCCCc---hhhHHHHhhchHHHHHHHHHHHHHhCCCCCCChh
Q psy9059 174 PGFYTTRILSTMLSEAMRILQEGT--SPKDLDRLTK-QFGFPV---GAATLSDEVGIDVGAHIAKDLSKTFGDRFSGGNL 247 (269)
Q Consensus 174 pGfI~nRll~al~~EA~~lv~eGi--s~edID~a~~-g~G~p~---GPf~~~D~~Gld~~~~~~~~l~~~~g~~~~~~~~ 247 (269)
++.|.+|++.+++|||+++++||| +++|||.+|+ |+|||. |||+++|.+|++.+.+.++.+ +.+|++|. |+
T Consensus 624 ~~~i~~r~l~~~~nea~~~l~egi~~~~~diD~~~~~G~g~p~~~GGp~~~~d~~G~~~~~~~~~~~-~~~g~~~~--p~ 700 (715)
T 1wdk_A 624 DEDIINWMMIPLCLETVRCLEDGIVETAAEADMGLVYGIGFPLFRGGALRYIDSIGVAEFVALADQY-AELGALYH--PT 700 (715)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTSSSSHHHHHHHHHHHTCCCGGGCCHHHHHHHHCHHHHHHHHHHT-GGGCGGGC--CC
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHhCCCCCCCCCCHHHHHHHhCHHHHHHHHHHH-HhcCCCCC--CC
Confidence 357999999999999999999998 9999999998 999998 999999999999999999999 88998888 67
Q ss_pred HHHHHHHHcCCCCCCCCCccCC
Q psy9059 248 NVLNEMVEKGYLDFKNKDGYYP 269 (269)
Q Consensus 248 ~lL~~lv~~G~lG~ksG~GFY~ 269 (269)
++|.+|+++| ++||+
T Consensus 701 ~~l~~~~~~g-------~~f~~ 715 (715)
T 1wdk_A 701 AKLREMAKNG-------QSFFG 715 (715)
T ss_dssp HHHHHHHHTT-------CCSCC
T ss_pred HHHHHHHHcC-------CCCCC
Confidence 9999999764 56884
No 19
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=99.41 E-value=4e-13 Score=136.44 Aligned_cols=81 Identities=27% Similarity=0.358 Sum_probs=76.6
Q ss_pred chhHHHHHHHHHHHHHHHHHcCC--CHHHHHHHHH-hcCCCc---hhhHHHHhhchHHHHHHHHHHHHHhCCCCCCChhH
Q psy9059 175 GFYTTRILSTMLSEAMRILQEGT--SPKDLDRLTK-QFGFPV---GAATLSDEVGIDVGAHIAKDLSKTFGDRFSGGNLN 248 (269)
Q Consensus 175 GfI~nRll~al~~EA~~lv~eGi--s~edID~a~~-g~G~p~---GPf~~~D~~Gld~~~~~~~~l~~~~g~~~~~~~~~ 248 (269)
+.|.+|++.+++|||+++++||| +++|||.+|+ |+|||. |||+++|.+|++.+.+.++.+.+.+|++|. |++
T Consensus 625 ~~i~~r~l~~~~nea~~~l~egi~~~~~diD~~~~~G~g~p~~~GGp~~~~d~~G~~~~~~~~~~~~~~~g~~~~--p~~ 702 (725)
T 2wtb_A 625 KDIIEMTFFPVVNEACRVFAEGIAVKAADLDIAGIMGMGFPPYRGGIMFWADSIGSKYIYSRLDEWSKAYGEFFK--PCA 702 (725)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHCCCGGGCCHHHHHHHHCHHHHHHHHHHHHHHHCGGGC--CCH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHhCCCCCCCCCCHHHHHHHhCHHHHHHHHHHHHHHcCCCCC--CCH
Confidence 57899999999999999999998 9999999998 999998 999999999999999999999999999888 679
Q ss_pred HHHHHHHcC
Q psy9059 249 VLNEMVEKG 257 (269)
Q Consensus 249 lL~~lv~~G 257 (269)
+|.+|+++|
T Consensus 703 ~l~~~~~~g 711 (725)
T 2wtb_A 703 FLAERGSKG 711 (725)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHcC
Confidence 999999865
No 20
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=99.18 E-value=2.4e-11 Score=107.61 Aligned_cols=168 Identities=13% Similarity=0.074 Sum_probs=121.5
Q ss_pred CeEEecCHHHHhcCCCCceEEeecCCCcCCCchhHHHHHHHhcCCCCcEEecCCCCCcccccccC-CCCCCCeEEEeecc
Q psy9059 53 GITYLYTYSERLMGSNGLAMVFPLQEQIPIQTPQQMSERIYMYTYSERLMGSNGLAMVFPLQEQI-PIQTPHLIIGMHYF 131 (269)
Q Consensus 53 ~l~~~~~~~~a~~~~~~~~V~E~vpE~l~~K~k~~l~~~l~~~~~~~~iiaSnTS~l~~p~~~~~-~~~~p~R~i~~Hff 131 (269)
+++...+++|++.++| +|+.++|++ . - +++++++.+.+++++++.++|+++ +.+.+. ....+ -..|++
T Consensus 55 g~~~~~~~~~~~~~~D--vvi~av~~~-~-~--~~v~~~l~~~~~~~~ivv~~s~~~--~~~~l~~~~~~~---~~~~~~ 123 (266)
T 3d1l_A 55 EAEYTTDLAEVNPYAK--LYIVSLKDS-A-F--AELLQGIVEGKREEALMVHTAGSI--PMNVWEGHVPHY---GVFYPM 123 (266)
T ss_dssp TCEEESCGGGSCSCCS--EEEECCCHH-H-H--HHHHHHHHTTCCTTCEEEECCTTS--CGGGSTTTCSSE---EEEEEC
T ss_pred CCceeCCHHHHhcCCC--EEEEecCHH-H-H--HHHHHHHHhhcCCCcEEEECCCCC--chHHHHHHHHhc---cCcCCc
Confidence 4567788999887655 999999997 2 3 678899999999999999999998 555543 23322 246888
Q ss_pred CCC-----CCCcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEEecc--Cch-----hHHHHH--HHHHHHHHHHHHcCC
Q psy9059 132 SPV-----DKMQLLEIITTEQTSQDTAASAVAVGLKQGKVVITVKDG--PGF-----YTTRIL--STMLSEAMRILQEGT 197 (269)
Q Consensus 132 nP~-----~~~~lVEiv~~~~Ts~e~~~~~~~~~~~lGk~pv~vkd~--pGf-----I~nRll--~al~~EA~~lv~eGi 197 (269)
+|. ..++.++++- ..++++..+.+.++++.+|+.++.+.+. +++ ++|++. ...+.|++. .+.|+
T Consensus 124 ~~~~g~~~~~~~~~~~~v-~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~eal~-~~~Gl 201 (266)
T 3d1l_A 124 QTFSKQREVDFKEIPFFI-EASSTEDAAFLKAIASTLSNRVYDADSEQRKSLHLAAVFTCNFTNHMYALAAELL-KKYNL 201 (266)
T ss_dssp CCC---CCCCCTTCCEEE-EESSHHHHHHHHHHHHTTCSCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHTTC
T ss_pred eecCCCchhhcCCCeEEE-ecCCHHHHHHHHHHHHhcCCcEEEeCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCC
Confidence 762 2334444433 3578999999999999999999988543 456 788887 455566643 46899
Q ss_pred CHHHH--------HHHHH-hc-CCCchhhHHHHhhchHHHHHHHHH
Q psy9059 198 SPKDL--------DRLTK-QF-GFPVGAATLSDEVGIDVGAHIAKD 233 (269)
Q Consensus 198 s~edI--------D~a~~-g~-G~p~GPf~~~D~~Gld~~~~~~~~ 233 (269)
+++++ +.+++ |. +.++||+...|..|++.....++.
T Consensus 202 ~~~~~~~l~~~~~~~~~~~~~~~~~~GP~~r~d~~~l~~~l~~l~~ 247 (266)
T 3d1l_A 202 PFDVMLPLIDETARKVHELEPKTAQTGPAIRYDENVIGNHLRMLAD 247 (266)
T ss_dssp CGGGGHHHHHHHHHHHHHSCHHHHCCSTTTTTCHHHHHHHHHHTTT
T ss_pred CHHHHHHHHHHHHHHHHhcChhhhCCCCCccCCHHHHHHHHHHHhc
Confidence 88777 44444 43 556799999999999987666543
No 21
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=99.02 E-value=9.2e-11 Score=105.17 Aligned_cols=166 Identities=7% Similarity=-0.005 Sum_probs=113.4
Q ss_pred EecCHHHHhcCCCCceEEeecCCCcCCCchhHHHHHHHhcCCCCcEEecCCCCCcccccccCCCCCCCeEEEee----cc
Q psy9059 56 YLYTYSERLMGSNGLAMVFPLQEQIPIQTPQQMSERIYMYTYSERLMGSNGLAMVFPLQEQIPIQTPHLIIGMH----YF 131 (269)
Q Consensus 56 ~~~~~~~a~~~~~~~~V~E~vpE~l~~K~k~~l~~~l~~~~~~~~iiaSnTS~l~~p~~~~~~~~~p~R~i~~H----ff 131 (269)
.+.+++|++.++| +|+.|+|++. + .+++.+|. .+++++.+.++++ |.+.++.. +..+.| +.
T Consensus 48 ~~~~~~~~~~~~D--vVilav~~~~--~--~~v~~~l~---~~~~ivi~~s~~~--~~~~l~~~----~~~~~~p~~~~~ 112 (276)
T 2i76_A 48 KAATLEKHPELNG--VVFVIVPDRY--I--KTVANHLN---LGDAVLVHCSGFL--SSEIFKKS----GRASIHPNFSFS 112 (276)
T ss_dssp CCCSSCCCCC-----CEEECSCTTT--H--HHHHTTTC---CSSCCEEECCSSS--CGGGGCSS----SEEEEEECSCC-
T ss_pred ccCCHHHHHhcCC--EEEEeCChHH--H--HHHHHHhc---cCCCEEEECCCCC--cHHHHHHh----hccccchhhhcC
Confidence 3456667776555 9999999954 6 78887775 6677777544444 55554332 566778 45
Q ss_pred CCCCCCc-EEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEEecc--C------chhHHHHHHHHHHHHHHHHH-cCC-CH-
Q psy9059 132 SPVDKMQ-LLEIITTEQTSQDTAASAVAVGLKQGKVVITVKDG--P------GFYTTRILSTMLSEAMRILQ-EGT-SP- 199 (269)
Q Consensus 132 nP~~~~~-lVEiv~~~~Ts~e~~~~~~~~~~~lGk~pv~vkd~--p------GfI~nRll~al~~EA~~lv~-eGi-s~- 199 (269)
||+.... +.++...-.++++..+.+..+++.+|+.++.+.+. + ++..| .+..+++++..+.. .|+ ..
T Consensus 113 g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lG~~~~~v~~~~~~~~~~~~~l~~n-~~~~~~~~a~~~~~~~Gl~~~~ 191 (276)
T 2i76_A 113 SLEKALEMKDQIVFGLEGDERGLPIVKKIAEEISGKYFVIPSEKKKAYHLAAVIASN-FPVALAYLSKRIYTLLGLDEPE 191 (276)
T ss_dssp -CTTGGGCGGGCCEEECCCTTTHHHHHHHHHHHCSCEEECCGGGHHHHHHHHHHHHT-THHHHHHHHHHHHHTTTCSCHH
T ss_pred CCchhHHHhCCCeEEEEeChHHHHHHHHHHHHhCCCEEEECHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcCCChHH
Confidence 6443221 33333333446677899999999999999888532 2 44444 66788899988876 799 66
Q ss_pred --------HHHHHHHH-h-cCCCchhhHHHHhhchHHHHHHHHHHHHH
Q psy9059 200 --------KDLDRLTK-Q-FGFPVGAATLSDEVGIDVGAHIAKDLSKT 237 (269)
Q Consensus 200 --------edID~a~~-g-~G~p~GPf~~~D~~Gld~~~~~~~~l~~~ 237 (269)
..+|.+++ | .+.++||++..|..+++...+.++.+.+.
T Consensus 192 a~~~~l~~~~~~~~~~~gp~~~~tgP~~r~D~~t~~~~l~~l~~~~~~ 239 (276)
T 2i76_A 192 LLIHTLMKGVADNIKKMRVECSLTGPVKRGDWQVVEEERREYEKIFGN 239 (276)
T ss_dssp HHHHHHHHHHHHHHHHSCGGGGCCSHHHHTCHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHhcChHhhCCCCcccCCHHHHHHHHHHHhccCcc
Confidence 68888887 7 66778999999999999998888876433
No 22
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=99.01 E-value=1.2e-09 Score=98.45 Aligned_cols=109 Identities=11% Similarity=0.075 Sum_probs=92.4
Q ss_pred CeEEecCHHHHhcCCCCceEEeecCCCcCCCchhHHHHHHHhc-CCCCcEEecCCCCCccccccc-CCCCCCCeEEEeec
Q psy9059 53 GITYLYTYSERLMGSNGLAMVFPLQEQIPIQTPQQMSERIYMY-TYSERLMGSNGLAMVFPLQEQ-IPIQTPHLIIGMHY 130 (269)
Q Consensus 53 ~l~~~~~~~~a~~~~~~~~V~E~vpE~l~~K~k~~l~~~l~~~-~~~~~iiaSnTS~l~~p~~~~-~~~~~p~R~i~~Hf 130 (269)
+++.+.+..|++.++| +|+.|||. ..+ ++++++|.++ ++++++|.|+++++ +++.+ ..+.++.|++.+||
T Consensus 50 gi~~~~~~~~~~~~aD--vVilav~p--~~~--~~vl~~l~~~~l~~~~iiiS~~agi--~~~~l~~~l~~~~~vvr~mP 121 (280)
T 3tri_A 50 GVHTTQDNRQGALNAD--VVVLAVKP--HQI--KMVCEELKDILSETKILVISLAVGV--TTPLIEKWLGKASRIVRAMP 121 (280)
T ss_dssp CCEEESCHHHHHSSCS--EEEECSCG--GGH--HHHHHHHHHHHHTTTCEEEECCTTC--CHHHHHHHHTCCSSEEEEEC
T ss_pred CCEEeCChHHHHhcCC--eEEEEeCH--HHH--HHHHHHHHhhccCCCeEEEEecCCC--CHHHHHHHcCCCCeEEEEec
Confidence 5678889999998766 99999975 566 9999999999 99999999999998 56554 45666789999999
Q ss_pred cCCCCCCcEEE-EeCCCCCCHHHHHHHHHHHHhCCcEEEE
Q psy9059 131 FSPVDKMQLLE-IITTEQTSQDTAASAVAVGLKQGKVVIT 169 (269)
Q Consensus 131 fnP~~~~~lVE-iv~~~~Ts~e~~~~~~~~~~~lGk~pv~ 169 (269)
.+|......++ +++++.++++.++.+..+++.+|+.+.+
T Consensus 122 n~p~~v~~g~~~l~~~~~~~~~~~~~v~~l~~~iG~~~~v 161 (280)
T 3tri_A 122 NTPSSVRAGATGLFANETVDKDQKNLAESIMRAVGLVIWV 161 (280)
T ss_dssp CGGGGGTCEEEEEECCTTSCHHHHHHHHHHHGGGEEEEEC
T ss_pred CChHHhcCccEEEEeCCCCCHHHHHHHHHHHHHCCCeEEE
Confidence 99988877665 5689999999999999999999985543
No 23
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=98.79 E-value=3.4e-08 Score=86.76 Aligned_cols=143 Identities=9% Similarity=0.131 Sum_probs=105.9
Q ss_pred CeEEecCHHHHhcCCCCceEEeecCCCcCCCchhHHHHHHHhcCCCCcEEecCCCCCccccccc-CCCCCCCeEEEeecc
Q psy9059 53 GITYLYTYSERLMGSNGLAMVFPLQEQIPIQTPQQMSERIYMYTYSERLMGSNGLAMVFPLQEQ-IPIQTPHLIIGMHYF 131 (269)
Q Consensus 53 ~l~~~~~~~~a~~~~~~~~V~E~vpE~l~~K~k~~l~~~l~~~~~~~~iiaSnTS~l~~p~~~~-~~~~~p~R~i~~Hff 131 (269)
+++.+.+..|++.++| +|+.|++ .... ++++++|.+++++++++.|.++++ +++.+ .....+.+++.+||.
T Consensus 50 g~~~~~~~~e~~~~aD--vVilav~--~~~~--~~v~~~l~~~l~~~~~vvs~~~gi--~~~~l~~~~~~~~~~v~~~p~ 121 (247)
T 3gt0_A 50 GLTTTTDNNEVAKNAD--ILILSIK--PDLY--ASIINEIKEIIKNDAIIVTIAAGK--SIESTENAFNKKVKVVRVMPN 121 (247)
T ss_dssp CCEECSCHHHHHHHCS--EEEECSC--TTTH--HHHC---CCSSCTTCEEEECSCCS--CHHHHHHHHCSCCEEEEEECC
T ss_pred CCEEeCChHHHHHhCC--EEEEEeC--HHHH--HHHHHHHHhhcCCCCEEEEecCCC--CHHHHHHHhCCCCcEEEEeCC
Confidence 4677889999998766 9999995 4667 999999999999999999999998 55444 344556799999999
Q ss_pred CCCCCCc-EEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEEeccCchhHHHH---------HHHHHHHHHH--HHHcCCCH
Q psy9059 132 SPVDKMQ-LLEIITTEQTSQDTAASAVAVGLKQGKVVITVKDGPGFYTTRI---------LSTMLSEAMR--ILQEGTSP 199 (269)
Q Consensus 132 nP~~~~~-lVEiv~~~~Ts~e~~~~~~~~~~~lGk~pv~vkd~pGfI~nRl---------l~al~~EA~~--lv~eGis~ 199 (269)
+|+.... .+++++++.++++.++.+..+++.+|+ ++.+.+. ..+++ ....+.||+. .++.|+++
T Consensus 122 ~p~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~G~-~~~~~e~---~~d~~~a~~g~gpa~~~~~~eal~~a~~~~Gl~~ 197 (247)
T 3gt0_A 122 TPALVGEGMSALCPNEMVTEKDLEDVLNIFNSFGQ-TEIVSEK---LMDVVTSVSGSSPAYVYMIIEAMADAAVLDGMPR 197 (247)
T ss_dssp GGGGGTCEEEEEEECTTCCHHHHHHHHHHHGGGEE-EEECCGG---GHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCH
T ss_pred hHHHHcCceEEEEeCCCCCHHHHHHHHHHHHhCCC-EEEeCHH---HccHHHHHhccHHHHHHHHHHHHHHHHHHcCCCH
Confidence 9998776 889999999999999999999999999 5555331 11211 1223445543 45678888
Q ss_pred HHHHHHHH
Q psy9059 200 KDLDRLTK 207 (269)
Q Consensus 200 edID~a~~ 207 (269)
++.-.++.
T Consensus 198 ~~a~~~~~ 205 (247)
T 3gt0_A 198 NQAYKFAA 205 (247)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77766664
No 24
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=98.62 E-value=7.9e-08 Score=88.16 Aligned_cols=120 Identities=9% Similarity=0.050 Sum_probs=92.1
Q ss_pred EEecCHHH-HhcCCCCceEEeecCCCcCCCchhHHHHHHHhcCCCCcEEecCCCCCcccccccCCCCCCCeEEEeeccCC
Q psy9059 55 TYLYTYSE-RLMGSNGLAMVFPLQEQIPIQTPQQMSERIYMYTYSERLMGSNGLAMVFPLQEQIPIQTPHLIIGMHYFSP 133 (269)
Q Consensus 55 ~~~~~~~~-a~~~~~~~~V~E~vpE~l~~K~k~~l~~~l~~~~~~~~iiaSnTS~l~~p~~~~~~~~~p~R~i~~HffnP 133 (269)
.++.+++| ++.++| +|+.|||.+ .. .++++++.+++++++||.+.+|.-..++..+... .|+|+++.||.++
T Consensus 82 ~~~~~~~~~~~~~aD--vVilavp~~--~~--~~vl~~l~~~l~~~~iv~d~~Svk~~~~~~~~~~-l~~~~v~~hPm~G 154 (314)
T 3ggo_A 82 EGTTSIAKVEDFSPD--FVMLSSPVR--TF--REIAKKLSYILSEDATVTDQGSVKGKLVYDLENI-LGKRFVGGHPIAG 154 (314)
T ss_dssp EEESCTTGGGGGCCS--EEEECSCGG--GH--HHHHHHHHHHSCTTCEEEECCSCCTHHHHHHHHH-HGGGEECEEECCC
T ss_pred hhcCCHHHHhhccCC--EEEEeCCHH--HH--HHHHHHHhhccCCCcEEEECCCCcHHHHHHHHHh-cCCCEEecCcccC
Confidence 46778888 887766 999999985 35 8899999999999999998887641123333211 1349999999887
Q ss_pred CCC------------CcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEE-eccCchhHHHH
Q psy9059 134 VDK------------MQLLEIITTEQTSQDTAASAVAVGLKQGKVVITV-KDGPGFYTTRI 181 (269)
Q Consensus 134 ~~~------------~~lVEiv~~~~Ts~e~~~~~~~~~~~lGk~pv~v-kd~pGfI~nRl 181 (269)
+.. ...+.+++++.++++.++.+.++++.+|+.++.+ .+....+...+
T Consensus 155 ~e~sG~~~A~~~Lf~g~~~il~~~~~~~~~~~~~v~~l~~~~G~~v~~~~~~~hD~~~a~~ 215 (314)
T 3ggo_A 155 TEKSGVEYSLDNLYEGKKVILTPTKKTDKKRLKLVKRVWEDVGGVVEYMSPELHDYVFGVV 215 (314)
T ss_dssp CCCCSGGGCCTTTTTTCEEEECCCTTSCHHHHHHHHHHHHHTTCEEEECCHHHHHHHHHHH
T ss_pred CcccchhhhhhhhhcCCEEEEEeCCCCCHHHHHHHHHHHHHcCCEEEEcCHHHHHHHHHHH
Confidence 542 4689999999999999999999999999999988 44444444444
No 25
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=98.40 E-value=2.9e-07 Score=82.76 Aligned_cols=149 Identities=13% Similarity=0.093 Sum_probs=100.6
Q ss_pred CeEEecCHHHHhcCCCCceEEeecCCCcCCCchhHHHH--HHHhcCCCCcEEecCCCCCccccc--cc-CCCC-CCCeEE
Q psy9059 53 GITYLYTYSERLMGSNGLAMVFPLQEQIPIQTPQQMSE--RIYMYTYSERLMGSNGLAMVFPLQ--EQ-IPIQ-TPHLII 126 (269)
Q Consensus 53 ~l~~~~~~~~a~~~~~~~~V~E~vpE~l~~K~k~~l~~--~l~~~~~~~~iiaSnTS~l~~p~~--~~-~~~~-~p~R~i 126 (269)
+++.++|++|++.++| +|+.|+|+...++ .-+.. ++.+.++++++|.+.+++. |.+ .+ ..+. +.-+++
T Consensus 46 g~~~~~~~~~~~~~aD--vvi~~vp~~~~~~--~v~~~~~~~~~~l~~~~~vi~~st~~--~~~~~~l~~~~~~~g~~~~ 119 (302)
T 2h78_A 46 GASAARSARDAVQGAD--VVISMLPASQHVE--GLYLDDDGLLAHIAPGTLVLECSTIA--PTSARKIHAAARERGLAML 119 (302)
T ss_dssp TCEECSSHHHHHTTCS--EEEECCSCHHHHH--HHHHSSSCGGGSSCSSCEEEECSCCC--HHHHHHHHHHHHHTTCCEE
T ss_pred CCeEcCCHHHHHhCCC--eEEEECCCHHHHH--HHHcCchhHHhcCCCCcEEEECCCCC--HHHHHHHHHHHHHcCCEEE
Confidence 5778899999998766 9999999977766 54442 6667777777665544333 322 22 2222 223444
Q ss_pred EeeccCCCC----CCcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEEec-cCchh---HHHHHHH----HHHHHHHHHH
Q psy9059 127 GMHYFSPVD----KMQLLEIITTEQTSQDTAASAVAVGLKQGKVVITVKD-GPGFY---TTRILST----MLSEAMRILQ 194 (269)
Q Consensus 127 ~~HffnP~~----~~~lVEiv~~~~Ts~e~~~~~~~~~~~lGk~pv~vkd-~pGfI---~nRll~a----l~~EA~~lv~ 194 (269)
. +|..+.. ...++.++.+ ++++++++..+++.+|+.++.+.+ ..|.. +|+++.+ +++|++.+.+
T Consensus 120 ~-~pv~~~~~~~~~g~l~~~~~g---~~~~~~~~~~ll~~~g~~~~~~~~~~~~~~~Kl~~n~~~~~~~~~~~Ea~~l~~ 195 (302)
T 2h78_A 120 D-APVSGGTAGAAAGTLTFMVGG---DAEALEKARPLFEAMGRNIFHAGPDGAGQVAKVCNNQLLAVLMIGTAEAMALGV 195 (302)
T ss_dssp E-CCEESCHHHHHHTCEEEEEES---CHHHHHHHHHHHHHHEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred E-EEccCChhhHhcCCceEEeCC---CHHHHHHHHHHHHHhCCCeEEcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4 3433321 1235666665 789999999999999999999854 33332 6666654 8999999887
Q ss_pred c-CCCHHHHHHHHH-hcCC
Q psy9059 195 E-GTSPKDLDRLTK-QFGF 211 (269)
Q Consensus 195 e-Gis~edID~a~~-g~G~ 211 (269)
. |+++++++.++. +.+.
T Consensus 196 ~~G~~~~~~~~~~~~~~~~ 214 (302)
T 2h78_A 196 ANGLEAKVLAEIMRRSSGG 214 (302)
T ss_dssp HTTCCHHHHHHHHHTSTTC
T ss_pred HcCCCHHHHHHHHHcCCCC
Confidence 4 669999999987 6543
No 26
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=98.25 E-value=6e-07 Score=86.96 Aligned_cols=145 Identities=7% Similarity=0.054 Sum_probs=106.7
Q ss_pred cCeEEecCHHHHhcCCCCceEEeecCC--------CcCCCchhHHHHHHHhcCCCCcEEecCCCCCccccc--c-c----
Q psy9059 52 TGITYLYTYSERLMGSNGLAMVFPLQE--------QIPIQTPQQMSERIYMYTYSERLMGSNGLAMVFPLQ--E-Q---- 116 (269)
Q Consensus 52 ~~l~~~~~~~~a~~~~~~~~V~E~vpE--------~l~~K~k~~l~~~l~~~~~~~~iiaSnTS~l~~p~~--~-~---- 116 (269)
+++++++++++++.++| +|+.|||. |+... ++++++|.++++++++| .+.|+. |+. + +
T Consensus 70 ~~l~~ttd~~~a~~~aD--vviiaVptp~~~~~~~dl~~v--~~v~~~i~~~l~~~~iV-V~~STv--~~gt~~~l~~~l 142 (478)
T 2y0c_A 70 GRLRFSTDIEAAVAHGD--VQFIAVGTPPDEDGSADLQYV--LAAARNIGRYMTGFKVI-VDKSTV--PVGTAERVRAAV 142 (478)
T ss_dssp TCEEEECCHHHHHHHCS--EEEECCCCCBCTTSSBCCHHH--HHHHHHHHHHCCSCEEE-EECSCC--CTTHHHHHHHHH
T ss_pred CCEEEECCHHHHhhcCC--EEEEEeCCCcccCCCccHHHH--HHHHHHHHHhcCCCCEE-EEeCCc--CCCchHHHHHHH
Confidence 68999999999998777 99999998 44555 99999999999999988 456676 331 1 1
Q ss_pred CC-CCCC---CeEEEeeccCCCCCCcEE---------EEeCCCCCCH----HHHHHHHHHHHhCCc--EEEEEe-----c
Q psy9059 117 IP-IQTP---HLIIGMHYFSPVDKMQLL---------EIITTEQTSQ----DTAASAVAVGLKQGK--VVITVK-----D 172 (269)
Q Consensus 117 ~~-~~~p---~R~i~~HffnP~~~~~lV---------Eiv~~~~Ts~----e~~~~~~~~~~~lGk--~pv~vk-----d 172 (269)
.. +..+ .++ .+.++|..+.+-. .|+.|.. ++ ++.+.+.++++.+++ .++.+. +
T Consensus 143 ~~~~~~g~~~~~~--~v~~~Pe~~~eG~~~~~~~~p~~iviG~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~di~~ae 219 (478)
T 2y0c_A 143 AEELAKRGGDQMF--SVVSNPEFLKEGAAVDDFTRPDRIVIGCD-DDVPGERARELMKKLYAPFNRNHERTLYMDVRSAE 219 (478)
T ss_dssp HHHHHHTTCCCCE--EEEECCCCCCTTCHHHHHHSCSCEEEECC-SSHHHHHHHHHHHHHTGGGGSSSCCEEEECHHHHH
T ss_pred HHHhcCCCCCccE--EEEEChhhhcccceeeccCCCCEEEEEEC-CCcccHHHHHHHHHHHHHHhccCCeEEcCCHHHHH
Confidence 11 1112 233 3578888877655 4666653 44 788899999988765 566665 3
Q ss_pred cCchhHHHHH---HHHHHHHHHHHH-cCCCHHHHHHHH
Q psy9059 173 GPGFYTTRIL---STMLSEAMRILQ-EGTSPKDLDRLT 206 (269)
Q Consensus 173 ~pGfI~nRll---~al~~EA~~lv~-eGis~edID~a~ 206 (269)
...++.|.++ .+++||+..+.+ .|++++++..++
T Consensus 220 ~~Kl~~N~~~a~~ia~~nE~~~la~~~Gid~~~v~~~i 257 (478)
T 2y0c_A 220 FTKYAANAMLATRISFMNELANLADRFGADIEAVRRGI 257 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHH
Confidence 4568888887 678999999886 577999998877
No 27
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=98.21 E-value=3.1e-06 Score=74.94 Aligned_cols=125 Identities=9% Similarity=0.060 Sum_probs=93.7
Q ss_pred HhcCCCCceEEeecCCCcCCCchhHHHHHHHhcCCCCcEEecCCCCCcccccccC-CCCCCCeEEEeeccCCCCCCcEEE
Q psy9059 63 RLMGSNGLAMVFPLQEQIPIQTPQQMSERIYMYTYSERLMGSNGLAMVFPLQEQI-PIQTPHLIIGMHYFSPVDKMQLLE 141 (269)
Q Consensus 63 a~~~~~~~~V~E~vpE~l~~K~k~~l~~~l~~~~~~~~iiaSnTS~l~~p~~~~~-~~~~p~R~i~~HffnP~~~~~lVE 141 (269)
++.+ || +-|+|.+ .= .+++++|.+++++++|+...+++. +.+.++ ...+..++++.||... ...
T Consensus 40 ~~~~--aD--ilavP~~--ai--~~vl~~l~~~l~~g~ivvd~sgs~--~~~vl~~~~~~g~~fvg~HPm~g-----~~~ 104 (232)
T 3dfu_A 40 DIRD--FE--LVVIDAH--GV--EGYVEKLSAFARRGQMFLHTSLTH--GITVMDPLETSGGIVMSAHPIGQ-----DRW 104 (232)
T ss_dssp GGGG--CS--EEEECSS--CH--HHHHHHHHTTCCTTCEEEECCSSC--CGGGGHHHHHTTCEEEEEEEEET-----TEE
T ss_pred Hhcc--CC--EEEEcHH--HH--HHHHHHHHHhcCCCCEEEEECCcC--HHHHHHHHHhCCCcEEEeeeCCC-----Cce
Confidence 3544 55 7789986 33 678899999999999988755444 343332 2345679999998632 123
Q ss_pred EeCCCCCCHHHHHHHHHHHHhCCcEEEEE--eccCch----hHHHHHHHHHHHHHHHH---HcCC-CHHH--HHH
Q psy9059 142 IITTEQTSQDTAASAVAVGLKQGKVVITV--KDGPGF----YTTRILSTMLSEAMRIL---QEGT-SPKD--LDR 204 (269)
Q Consensus 142 iv~~~~Ts~e~~~~~~~~~~~lGk~pv~v--kd~pGf----I~nRll~al~~EA~~lv---~eGi-s~ed--ID~ 204 (269)
++.+ .+++.++.+..+.+.+|+.++.+ .+.++| .....+.++.++|.+++ ++|+ +++| +|.
T Consensus 105 ~i~a--~d~~a~~~l~~L~~~lG~~vv~~~~~~hd~~~AAvsh~nhLv~L~~~A~~ll~~~~~g~a~~~d~~~~~ 177 (232)
T 3dfu_A 105 VASA--LDELGETIVGLLVGELGGSIVEIADDKRAQLAAALTYAGFLSTLQRDASYFLDEFLGDPDVTSDIVMDS 177 (232)
T ss_dssp EEEE--SSHHHHHHHHHHHHHTTCEECCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred eeeC--CCHHHHHHHHHHHHHhCCEEEEeCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhhhhhhc
Confidence 3333 27889999999999999999998 556777 67888999999999999 8999 9999 553
No 28
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=98.17 E-value=1.4e-06 Score=79.32 Aligned_cols=144 Identities=12% Similarity=0.065 Sum_probs=94.5
Q ss_pred CeEEecCHHHHhcCCCCceEEeecCCCcCCCchhHHHHHHHhcCCCCcEEecCCCCCcccccc--c-CCCC-C--CCeEE
Q psy9059 53 GITYLYTYSERLMGSNGLAMVFPLQEQIPIQTPQQMSERIYMYTYSERLMGSNGLAMVFPLQE--Q-IPIQ-T--PHLII 126 (269)
Q Consensus 53 ~l~~~~~~~~a~~~~~~~~V~E~vpE~l~~K~k~~l~~~l~~~~~~~~iiaSnTS~l~~p~~~--~-~~~~-~--p~R~i 126 (269)
+++++.|++|++.++| +|+.|||.... .+++.+|.++++++++|...||.. |.+. + .... + .-+++
T Consensus 70 g~~~~~~~~e~~~~aD--vVi~~vp~~~~----~~~~~~l~~~l~~~~ivvd~st~~--~~~~~~~~~~~~~~~~g~~~v 141 (312)
T 3qsg_A 70 GVSCKASVAEVAGECD--VIFSLVTAQAA----LEVAQQAGPHLCEGALYADFTSCS--PAVKRAIGDVISRHRPSAQYA 141 (312)
T ss_dssp TCEECSCHHHHHHHCS--EEEECSCTTTH----HHHHHHHGGGCCTTCEEEECCCCC--HHHHHHHHHHHHHHCTTCEEE
T ss_pred CCEEeCCHHHHHhcCC--EEEEecCchhH----HHHHHhhHhhcCCCCEEEEcCCCC--HHHHHHHHHHHHhhcCCCeEE
Confidence 5778899999998776 99999999654 346789999998998888776654 3222 1 1111 1 12333
Q ss_pred EeeccCCC--CCCcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEEeccCch-----hHHHHHH----HHHHHHHHHHH-
Q psy9059 127 GMHYFSPV--DKMQLLEIITTEQTSQDTAASAVAVGLKQGKVVITVKDGPGF-----YTTRILS----TMLSEAMRILQ- 194 (269)
Q Consensus 127 ~~HffnP~--~~~~lVEiv~~~~Ts~e~~~~~~~~~~~lGk~pv~vkd~pGf-----I~nRll~----al~~EA~~lv~- 194 (269)
..-.+.|+ ..-.++.++.++.+ +++..+++.+|+.++++.+.+|- ++|-++. ++++|++.+.+
T Consensus 142 d~pv~g~~~~~~g~l~i~vgg~~~-----~~~~~ll~~~g~~~~~~g~~~g~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~ 216 (312)
T 3qsg_A 142 AVAVMSAVKPHGHRVPLVVDGDGA-----RRFQAAFTLYGCRIEVLDGEVGGAALLKMCRSAVLKGLEALFLEALAAAEK 216 (312)
T ss_dssp EEEECSCSTTTGGGSEEEEESTTH-----HHHHHHHHTTTCEEEECCSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred eccccCCchhhcCCEEEEecCChH-----HHHHHHHHHhCCCeEEcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22112221 11267888888765 78889999999999888654553 3333333 77799998765
Q ss_pred cCCCHHHHHHHHHhc
Q psy9059 195 EGTSPKDLDRLTKQF 209 (269)
Q Consensus 195 eGis~edID~a~~g~ 209 (269)
.|++++-++.+..+.
T Consensus 217 ~Gld~~~~~~l~~~~ 231 (312)
T 3qsg_A 217 MGLADRVLASLDASF 231 (312)
T ss_dssp TTCHHHHHHHHHHHS
T ss_pred cCCCHHHHHHHHhcC
Confidence 688776666433344
No 29
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=98.15 E-value=5.2e-06 Score=74.12 Aligned_cols=105 Identities=12% Similarity=0.034 Sum_probs=79.8
Q ss_pred CHHHHhcCCCCceEEeecCCCcCCCchhHHHHHHHhcCCCCcEEecCCCCCcccccccCCCCCCCeEEEeeccCCCC---
Q psy9059 59 TYSERLMGSNGLAMVFPLQEQIPIQTPQQMSERIYMYTYSERLMGSNGLAMVFPLQEQIPIQTPHLIIGMHYFSPVD--- 135 (269)
Q Consensus 59 ~~~~a~~~~~~~~V~E~vpE~l~~K~k~~l~~~l~~~~~~~~iiaSnTS~l~~p~~~~~~~~~p~R~i~~HffnP~~--- 135 (269)
+..+++.++| +|+.|+|.+. - .+++++|.+.++++++|.+.+++. |.+.+.......++++.||.+|..
T Consensus 60 ~~~~~~~~aD--vVi~av~~~~--~--~~v~~~l~~~l~~~~ivv~~s~~~--~~~~l~~~~~~~~~v~~~P~~~~~~~~ 131 (286)
T 3c24_A 60 DGDGWIDEAD--VVVLALPDNI--I--EKVAEDIVPRVRPGTIVLILDAAA--PYAGVMPERADITYFIGHPCHPPLFND 131 (286)
T ss_dssp CSSGGGGTCS--EEEECSCHHH--H--HHHHHHHGGGSCTTCEEEESCSHH--HHHTCSCCCTTSEEEEEEECCSCSSCC
T ss_pred CHHHHhcCCC--EEEEcCCchH--H--HHHHHHHHHhCCCCCEEEECCCCc--hhHHHHhhhCCCeEEecCCCCcccccc
Confidence 6677887666 9999999865 5 789999999999999999866665 555544333336899999998866
Q ss_pred -----CCc--------EEEEeCCCCCCHHHHHHHHHHHHhCCc---EEEEEe
Q psy9059 136 -----KMQ--------LLEIITTEQTSQDTAASAVAVGLKQGK---VVITVK 171 (269)
Q Consensus 136 -----~~~--------lVEiv~~~~Ts~e~~~~~~~~~~~lGk---~pv~vk 171 (269)
... ...++.+..++++..+.+.++++.+|+ .++.+.
T Consensus 132 ~~~~~~~~g~l~~~~~~~~i~~~~~~~~~~~~~v~~l~~~~G~~~~~~~~v~ 183 (286)
T 3c24_A 132 ETDPAARTDYHGGIAKQAIVCALMQGPEEHYAIGADICETMWSPVTRTHRVT 183 (286)
T ss_dssp CCSHHHHTCSSSSSSCEEEEEEEEESCTHHHHHHHHHHHHHTCSEEEEEECC
T ss_pred ccchhhccCcccccccceeeeeccCCCHHHHHHHHHHHHHhcCCcceEEEeC
Confidence 222 244544445788999999999999999 888884
No 30
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=98.13 E-value=2.6e-06 Score=76.14 Aligned_cols=148 Identities=11% Similarity=0.045 Sum_probs=99.5
Q ss_pred CeEEecCHHHHhcCCCCceEEeecCCCcCCCchhHHH--HHHHhcCCCCcEEecCCCCCcccccc--c-CCC-CCCCeEE
Q psy9059 53 GITYLYTYSERLMGSNGLAMVFPLQEQIPIQTPQQMS--ERIYMYTYSERLMGSNGLAMVFPLQE--Q-IPI-QTPHLII 126 (269)
Q Consensus 53 ~l~~~~~~~~a~~~~~~~~V~E~vpE~l~~K~k~~l~--~~l~~~~~~~~iiaSnTS~l~~p~~~--~-~~~-~~p~R~i 126 (269)
++++++|++|++.++| +|+.|+|+...++ .-++ +++.+.+++++++...|+.. |.+. + ... .+.-+++
T Consensus 44 g~~~~~~~~~~~~~aD--vvi~~vp~~~~~~--~v~~~~~~l~~~l~~~~~vi~~st~~--~~~~~~~~~~~~~~g~~~~ 117 (287)
T 3pef_A 44 GAERAATPCEVVESCP--VTFAMLADPAAAE--EVCFGKHGVLEGIGEGRGYVDMSTVD--PATSQRIGVAVVAKGGRFL 117 (287)
T ss_dssp TCEECSSHHHHHHHCS--EEEECCSSHHHHH--HHHHSTTCHHHHCCTTCEEEECSCCC--HHHHHHHHHHHHHTTCEEE
T ss_pred CCeecCCHHHHHhcCC--EEEEEcCCHHHHH--HHHcCcchHhhcCCCCCEEEeCCCCC--HHHHHHHHHHHHHhCCEEE
Confidence 5788999999998876 9999999877776 5555 77888888887776554432 3221 2 111 1223444
Q ss_pred EeeccCCCC----CCcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEEeccCc------hhHHHHH---HHHHHHHHHHH
Q psy9059 127 GMHYFSPVD----KMQLLEIITTEQTSQDTAASAVAVGLKQGKVVITVKDGPG------FYTTRIL---STMLSEAMRIL 193 (269)
Q Consensus 127 ~~HffnP~~----~~~lVEiv~~~~Ts~e~~~~~~~~~~~lGk~pv~vkd~pG------fI~nRll---~al~~EA~~lv 193 (269)
. ||..... .-.++.++.+ ++++++++..+++.+|+.++.+.+ +| ++.|-+. .+.++|++.+.
T Consensus 118 ~-~pv~g~~~~a~~g~l~~~~gg---~~~~~~~~~~ll~~~g~~~~~~g~-~g~~~~~Kl~~N~~~~~~~~~~~E~~~l~ 192 (287)
T 3pef_A 118 E-APVSGSKKPAEDGTLIILAAG---DRNLYDEAMPGFEKMGKKIIHLGD-VGKGAEMKLVVNMVMGGMMACFCEGLALG 192 (287)
T ss_dssp E-CCEECCHHHHHHTCEEEEEEE---CHHHHHHHHHHHHHHEEEEEECSS-TTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred E-CCCcCCHHHHhcCCEEEEEeC---CHHHHHHHHHHHHHhCCCeEEeCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4 5432211 1135556654 688999999999999999998854 44 2333332 33789999887
Q ss_pred H-cCCCHHHHHHHHH-hcCC
Q psy9059 194 Q-EGTSPKDLDRLTK-QFGF 211 (269)
Q Consensus 194 ~-eGis~edID~a~~-g~G~ 211 (269)
+ .|++++++..++. +.+.
T Consensus 193 ~~~G~d~~~~~~~~~~~~~~ 212 (287)
T 3pef_A 193 EKAGLATDAILDVIGAGAMA 212 (287)
T ss_dssp HHTTCCHHHHHHHHHHSTTC
T ss_pred HHcCCCHHHHHHHHHhcccc
Confidence 6 5779999999986 6554
No 31
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=98.08 E-value=1.2e-05 Score=72.46 Aligned_cols=144 Identities=10% Similarity=0.107 Sum_probs=98.4
Q ss_pred cCeEEecCHHHHhcCCCCceEEeecCCCcCCCchhHHHHHHHhcCCCCcEEecCCCCCccccc-c-c-CCC-CCCCeEEE
Q psy9059 52 TGITYLYTYSERLMGSNGLAMVFPLQEQIPIQTPQQMSERIYMYTYSERLMGSNGLAMVFPLQ-E-Q-IPI-QTPHLIIG 127 (269)
Q Consensus 52 ~~l~~~~~~~~a~~~~~~~~V~E~vpE~l~~K~k~~l~~~l~~~~~~~~iiaSnTS~l~~p~~-~-~-~~~-~~p~R~i~ 127 (269)
.++++++|++|++. +| +|+.++|+...++ +++.++.+.+++++++...|++. |.+ + + ..+ .+.-+++.
T Consensus 57 ~g~~~~~~~~~~~~-aD--vvi~~vp~~~~~~---~v~~~l~~~l~~g~ivv~~st~~--~~~~~~~~~~~~~~g~~~~~ 128 (296)
T 3qha_A 57 AGATLADSVADVAA-AD--LIHITVLDDAQVR---EVVGELAGHAKPGTVIAIHSTIS--DTTAVELARDLKARDIHIVD 128 (296)
T ss_dssp TTCEECSSHHHHTT-SS--EEEECCSSHHHHH---HHHHHHHTTCCTTCEEEECSCCC--HHHHHHHHHHHGGGTCEEEE
T ss_pred CCCEEcCCHHHHHh-CC--EEEEECCChHHHH---HHHHHHHHhcCCCCEEEEeCCCC--HHHHHHHHHHHHHcCCEEEe
Confidence 35789999999997 66 9999999876666 45588888888777766544433 322 1 2 112 12233443
Q ss_pred eeccCCCC---CCcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEEeccCc------hhHHHHHH---HHHHHHHHHHH-
Q psy9059 128 MHYFSPVD---KMQLLEIITTEQTSQDTAASAVAVGLKQGKVVITVKDGPG------FYTTRILS---TMLSEAMRILQ- 194 (269)
Q Consensus 128 ~HffnP~~---~~~lVEiv~~~~Ts~e~~~~~~~~~~~lGk~pv~vkd~pG------fI~nRll~---al~~EA~~lv~- 194 (269)
...+.++. .-.++.++.+ ++++++++..+++.+|+.++.+.+ +| ++.|.+.. +.++|++.+.+
T Consensus 129 ~pv~g~~~~a~~g~l~~~~gg---~~~~~~~~~~ll~~~g~~~~~~g~-~g~a~~~Kl~~N~~~~~~~~~~~E~~~l~~~ 204 (296)
T 3qha_A 129 APVSGGAAAAARGELATMVGA---DREVYERIKPAFKHWAAVVIHAGE-PGAGTRMKLARNMLTFTSYAAACEAMKLAEA 204 (296)
T ss_dssp CCEESCHHHHHHTCEEEEEEC---CHHHHHHHHHHHHHHEEEEEEEES-TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcCCHHHHhcCCccEEecC---CHHHHHHHHHHHHHHcCCeEEcCC-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222221 2346677766 689999999999999999998865 55 55565553 45799998876
Q ss_pred cCCCHHHH------HHHHH
Q psy9059 195 EGTSPKDL------DRLTK 207 (269)
Q Consensus 195 eGis~edI------D~a~~ 207 (269)
.|++++++ ..++.
T Consensus 205 ~G~d~~~~~~~~~~~~~i~ 223 (296)
T 3qha_A 205 AGLDLQALGRVVRHTDALT 223 (296)
T ss_dssp TTCCHHHHHHHHHHHHHHH
T ss_pred cCCCHHHHhhhcchHHHHh
Confidence 57799999 88875
No 32
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=97.99 E-value=4.8e-06 Score=80.06 Aligned_cols=151 Identities=8% Similarity=0.053 Sum_probs=103.2
Q ss_pred cCeEEecCHHHHhcCCCCceEEeecCCCcCCCc-----------hhHHHHHHHhcCCCCcEEecCCCCCcccccc-c-CC
Q psy9059 52 TGITYLYTYSERLMGSNGLAMVFPLQEQIPIQT-----------PQQMSERIYMYTYSERLMGSNGLAMVFPLQE-Q-IP 118 (269)
Q Consensus 52 ~~l~~~~~~~~a~~~~~~~~V~E~vpE~l~~K~-----------k~~l~~~l~~~~~~~~iiaSnTS~l~~p~~~-~-~~ 118 (269)
++++++++++|++.++| +|+.|||...+.+. =.+..++|.++++++++| .++|+.+.-.++ + ..
T Consensus 68 ~~~~~t~~~~e~~~~aD--vViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~~~l~~g~iV-V~~STv~~g~~~~l~~~ 144 (467)
T 2q3e_A 68 KNLFFSTNIDDAIKEAD--LVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIV-TEKSTVPVRAAESIRRI 144 (467)
T ss_dssp TTEEEESCHHHHHHHCS--EEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHTCCSEEEE-EECSCCCTTHHHHHHHH
T ss_pred CCEEEECCHHHHHhcCC--EEEEEcCCchhhccccccCCCcHHHHHHHHHHHHhhCCCCCEE-EECCcCCchHHHHHHHH
Confidence 57899999999998766 99999998776651 136778899888888877 444444111111 1 11
Q ss_pred C--CCC--CeEEEeeccCCCCCCcEEE---------E-eCCCC--CCHHHHHHHHHHHHhC-CcEEEEEec-----cCch
Q psy9059 119 I--QTP--HLIIGMHYFSPVDKMQLLE---------I-ITTEQ--TSQDTAASAVAVGLKQ-GKVVITVKD-----GPGF 176 (269)
Q Consensus 119 ~--~~p--~R~i~~HffnP~~~~~lVE---------i-v~~~~--Ts~e~~~~~~~~~~~l-Gk~pv~vkd-----~pGf 176 (269)
+ ... ..+-+ .++|....+-.. | +.++. +++++.+.+.++++.+ |+.++.+.+ ...+
T Consensus 145 l~~~~~~~~d~~V--~~~Pe~~~~G~~~~d~~~~~rivvGg~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~ae~~Kl 222 (467)
T 2q3e_A 145 FDANTKPNLNLQV--LSNPEFLAEGTAIKDLKNPDRVLIGGDETPEGQRAVQALCAVYEHWVPREKILTTNTWSSELSKL 222 (467)
T ss_dssp HHHTCCTTCEEEE--EECCCCCCTTSHHHHHHSCSCEEEECCSSHHHHHHHHHHHHHHTTTSCGGGEEEECHHHHHHHHH
T ss_pred HHHhCCCCCCeEE--EeCHHHhhcccchhhccCCCEEEECCCCCCCCHHHHHHHHHHHHHhccCCeEEecCHHHHHHHHH
Confidence 1 111 12222 367776655443 3 45544 4788999999999998 777777753 3567
Q ss_pred hHHHHH---HHHHHHHHHHHH-cCCCHHHHHHHHH
Q psy9059 177 YTTRIL---STMLSEAMRILQ-EGTSPKDLDRLTK 207 (269)
Q Consensus 177 I~nRll---~al~~EA~~lv~-eGis~edID~a~~ 207 (269)
+.|.+. .+++||+..+.+ .|+++++++.++.
T Consensus 223 ~~N~~~a~~ia~~nE~~~l~~~~Gid~~~v~~~~~ 257 (467)
T 2q3e_A 223 AANAFLAQRISSINSISALCEATGADVEEVATAIG 257 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHc
Confidence 888864 688899999887 5779999999885
No 33
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=97.99 E-value=4.8e-06 Score=75.59 Aligned_cols=148 Identities=11% Similarity=0.004 Sum_probs=99.4
Q ss_pred CeEEecCHHHHhcCCCCceEEeecCCCcCCCchhHHH--HHHHhcCCCCcEEecCCCCCccccc-c-c-CCC-CCCCeEE
Q psy9059 53 GITYLYTYSERLMGSNGLAMVFPLQEQIPIQTPQQMS--ERIYMYTYSERLMGSNGLAMVFPLQ-E-Q-IPI-QTPHLII 126 (269)
Q Consensus 53 ~l~~~~~~~~a~~~~~~~~V~E~vpE~l~~K~k~~l~--~~l~~~~~~~~iiaSnTS~l~~p~~-~-~-~~~-~~p~R~i 126 (269)
++++++|++|++.++| +|+.++|+...++ .-++ ++|.+.++++++|...|+.- |.+ . + ..+ .+.-+++
T Consensus 64 g~~~~~~~~~~~~~aD--vvi~~vp~~~~~~--~v~~~~~~l~~~l~~g~~vv~~st~~--~~~~~~~~~~~~~~g~~~v 137 (310)
T 3doj_A 64 GASVCESPAEVIKKCK--YTIAMLSDPCAAL--SVVFDKGGVLEQICEGKGYIDMSTVD--AETSLKINEAITGKGGRFV 137 (310)
T ss_dssp TCEECSSHHHHHHHCS--EEEECCSSHHHHH--HHHHSTTCGGGGCCTTCEEEECSCCC--HHHHHHHHHHHHHTTCEEE
T ss_pred CCeEcCCHHHHHHhCC--EEEEEcCCHHHHH--HHHhCchhhhhccCCCCEEEECCCCC--HHHHHHHHHHHHHcCCEEE
Confidence 4688899999998776 9999999876666 5444 66777777777665544332 322 1 2 111 1222343
Q ss_pred EeeccCCC----CCCcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEEeccCc------hhHHHHH---HHHHHHHHHHH
Q psy9059 127 GMHYFSPV----DKMQLLEIITTEQTSQDTAASAVAVGLKQGKVVITVKDGPG------FYTTRIL---STMLSEAMRIL 193 (269)
Q Consensus 127 ~~HffnP~----~~~~lVEiv~~~~Ts~e~~~~~~~~~~~lGk~pv~vkd~pG------fI~nRll---~al~~EA~~lv 193 (269)
. ||.... ..-+++-++.+ ++++++++..+++.+|+.++.+.+ +| ++.|.+. .+.++|++.+.
T Consensus 138 ~-~pv~g~~~~a~~g~l~i~~gg---~~~~~~~~~~ll~~~g~~~~~~g~-~g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~ 212 (310)
T 3doj_A 138 E-GPVSGSKKPAEDGQLIILAAG---DKALFEESIPAFDVLGKRSFYLGQ-VGNGAKMKLIVNMIMGSMMNAFSEGLVLA 212 (310)
T ss_dssp E-CCEECCHHHHHHTCEEEEEEE---CHHHHHHHHHHHHHHEEEEEECSS-TTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred e-CCCCCChhHHhcCCeEEEEcC---CHHHHHHHHHHHHHhCCCEEEeCC-cCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3 432210 11235566655 588999999999999999998865 55 5666665 45679999987
Q ss_pred H-cCCCHHHHHHHHH-hcCC
Q psy9059 194 Q-EGTSPKDLDRLTK-QFGF 211 (269)
Q Consensus 194 ~-eGis~edID~a~~-g~G~ 211 (269)
+ .|++++++..++. +.+.
T Consensus 213 ~~~G~d~~~~~~~~~~~~~~ 232 (310)
T 3doj_A 213 DKSGLSSDTLLDILDLGAMT 232 (310)
T ss_dssp HHTTSCHHHHHHHHHHSTTC
T ss_pred HHcCCCHHHHHHHHHhcccc
Confidence 6 5779999999986 6554
No 34
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=97.94 E-value=4.6e-05 Score=69.46 Aligned_cols=109 Identities=10% Similarity=0.045 Sum_probs=83.4
Q ss_pred CeEEecCHHHHhcCCCCceEEeecCCCcCCCchhHHHHHHHhcCCCCcEEecCCCCCcccccccC-CCC---CCCeEEEe
Q psy9059 53 GITYLYTYSERLMGSNGLAMVFPLQEQIPIQTPQQMSERIYMYTYSERLMGSNGLAMVFPLQEQI-PIQ---TPHLIIGM 128 (269)
Q Consensus 53 ~l~~~~~~~~a~~~~~~~~V~E~vpE~l~~K~k~~l~~~l~~~~~~~~iiaSnTS~l~~p~~~~~-~~~---~p~R~i~~ 128 (269)
+++++.+..|++.++| +|+.|||- ... .+++.+|...++++++|.|.++++ +...++ .+. ...+++..
T Consensus 71 G~~~~~~~~e~~~~aD--vVilav~~--~~~--~~vl~~l~~~l~~~~ivvs~s~gi--~~~~l~~~l~~~~~~~~vv~~ 142 (322)
T 2izz_A 71 GVKLTPHNKETVQHSD--VLFLAVKP--HII--PFILDEIGADIEDRHIVVSCAAGV--TISSIEKKLSAFRPAPRVIRC 142 (322)
T ss_dssp TCEEESCHHHHHHHCS--EEEECSCG--GGH--HHHHHHHGGGCCTTCEEEECCTTC--CHHHHHHHHHTTSSCCEEEEE
T ss_pred CCEEeCChHHHhccCC--EEEEEeCH--HHH--HHHHHHHHhhcCCCCEEEEeCCCC--CHHHHHHHHhhcCCCCeEEEE
Confidence 4677788999997766 99999983 455 889999999999999999887776 444321 111 14589999
Q ss_pred eccCCCCCCcEEEEe-CCCCCCHHHHHHHHHHHHhCCcEEEE
Q psy9059 129 HYFSPVDKMQLLEII-TTEQTSQDTAASAVAVGLKQGKVVIT 169 (269)
Q Consensus 129 HffnP~~~~~lVEiv-~~~~Ts~e~~~~~~~~~~~lGk~pv~ 169 (269)
|+..|.....-..++ .++.++++..+.+..+++.+|+.+.+
T Consensus 143 ~p~~p~~~~~g~~v~~~g~~~~~~~~~~v~~ll~~~G~~~~~ 184 (322)
T 2izz_A 143 MTNTPVVVREGATVYATGTHAQVEDGRLMEQLLSSVGFCTEV 184 (322)
T ss_dssp ECCGGGGGTCEEEEEEECTTCCHHHHHHHHHHHHTTEEEEEC
T ss_pred eCCcHHHHcCCeEEEEeCCCCCHHHHHHHHHHHHhCCCEEEe
Confidence 998887765544555 67778899999999999999986543
No 35
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=97.92 E-value=3.7e-06 Score=75.95 Aligned_cols=149 Identities=9% Similarity=0.028 Sum_probs=100.0
Q ss_pred CeEEecCHHHHhcCCCCceEEeecCCCcCCCchhHHHHH--HHhcCCCCcEEecCCCCCccccccc-CCC-CCCCeEEEe
Q psy9059 53 GITYLYTYSERLMGSNGLAMVFPLQEQIPIQTPQQMSER--IYMYTYSERLMGSNGLAMVFPLQEQ-IPI-QTPHLIIGM 128 (269)
Q Consensus 53 ~l~~~~~~~~a~~~~~~~~V~E~vpE~l~~K~k~~l~~~--l~~~~~~~~iiaSnTS~l~~p~~~~-~~~-~~p~R~i~~ 128 (269)
+++...++.|++.++| +|+.|+|+...++ .-+.+. +.+.+.++++|.+-+++.......+ +.+ .++.+++..
T Consensus 73 g~~~~~~~~~~~~~~D--vVi~av~~~~~~~--~v~~~~~~~~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~~~~~v~~ 148 (316)
T 2uyy_A 73 GARLGRTPAEVVSTCD--ITFACVSDPKAAK--DLVLGPSGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGRFLEA 148 (316)
T ss_dssp TCEECSCHHHHHHHCS--EEEECCSSHHHHH--HHHHSTTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEC
T ss_pred CCEEcCCHHHHHhcCC--EEEEeCCCHHHHH--HHHcCchhHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEEc
Confidence 3566778999997766 9999999866665 433321 2245566665543222220022222 222 246688888
Q ss_pred eccCCC---CCCcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEEeccCc------hhHHHH---HHHHHHHHHHHHH-c
Q psy9059 129 HYFSPV---DKMQLLEIITTEQTSQDTAASAVAVGLKQGKVVITVKDGPG------FYTTRI---LSTMLSEAMRILQ-E 195 (269)
Q Consensus 129 HffnP~---~~~~lVEiv~~~~Ts~e~~~~~~~~~~~lGk~pv~vkd~pG------fI~nRl---l~al~~EA~~lv~-e 195 (269)
++++.+ ....+++++.+ +++..+.+.++++.+|+.++.+.+ +| .+.|.+ ..++++|++.+.+ .
T Consensus 149 p~~g~~~~~~~g~~~~~~~g---~~~~~~~v~~ll~~~g~~~~~~~~-~~~~~~~K~~~n~~~~~~~~~~~Ea~~la~~~ 224 (316)
T 2uyy_A 149 PVSGNQQLSNDGMLVILAAG---DRGLYEDCSSCFQAMGKTSFFLGE-VGNAAKMMLIVNMVQGSFMATIAEGLTLAQVT 224 (316)
T ss_dssp CEESCHHHHHHTCEEEEEEE---CHHHHHHTHHHHHHHEEEEEECSS-TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CccCChhHHhhCCEEEEeCC---CHHHHHHHHHHHHHhcCCEEEeCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 877543 33457778776 578899999999999998887754 23 467776 5788999998865 6
Q ss_pred CCCHHHHHHHHH-hc
Q psy9059 196 GTSPKDLDRLTK-QF 209 (269)
Q Consensus 196 Gis~edID~a~~-g~ 209 (269)
|+++++++.++. +.
T Consensus 225 G~~~~~~~~~~~~~~ 239 (316)
T 2uyy_A 225 GQSQQTLLDILNQGQ 239 (316)
T ss_dssp TCCHHHHHHHHHHST
T ss_pred CCCHHHHHHHHHcCC
Confidence 889999998886 53
No 36
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=97.91 E-value=1e-05 Score=72.26 Aligned_cols=149 Identities=11% Similarity=-0.003 Sum_probs=96.4
Q ss_pred CeEEecCHHHHhcCCCCceEEeecCCCcCCCchhHHH--HHHHhcCCCCcEEecCCCCCccccc-c-c-CCC-CCCCeEE
Q psy9059 53 GITYLYTYSERLMGSNGLAMVFPLQEQIPIQTPQQMS--ERIYMYTYSERLMGSNGLAMVFPLQ-E-Q-IPI-QTPHLII 126 (269)
Q Consensus 53 ~l~~~~~~~~a~~~~~~~~V~E~vpE~l~~K~k~~l~--~~l~~~~~~~~iiaSnTS~l~~p~~-~-~-~~~-~~p~R~i 126 (269)
++++++|++|++.++| +|+.++|+...++ .-++ +++.+.+++++++...|++- |.+ . + ... .+.-+++
T Consensus 44 g~~~~~~~~~~~~~ad--vvi~~v~~~~~~~--~v~~~~~~l~~~l~~g~~vv~~st~~--~~~~~~~~~~~~~~g~~~~ 117 (287)
T 3pdu_A 44 GARQASSPAEVCAACD--ITIAMLADPAAAR--EVCFGANGVLEGIGGGRGYIDMSTVD--DETSTAIGAAVTARGGRFL 117 (287)
T ss_dssp TCEECSCHHHHHHHCS--EEEECCSSHHHHH--HHHHSTTCGGGTCCTTCEEEECSCCC--HHHHHHHHHHHHHTTCEEE
T ss_pred CCeecCCHHHHHHcCC--EEEEEcCCHHHHH--HHHcCchhhhhcccCCCEEEECCCCC--HHHHHHHHHHHHHcCCEEE
Confidence 5688899999998876 9999999976666 5444 66777777766665443332 322 1 2 111 2223444
Q ss_pred EeeccCCCCC---CcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEEeccCc------hhHHHHH---HHHHHHHHHHHH
Q psy9059 127 GMHYFSPVDK---MQLLEIITTEQTSQDTAASAVAVGLKQGKVVITVKDGPG------FYTTRIL---STMLSEAMRILQ 194 (269)
Q Consensus 127 ~~HffnP~~~---~~lVEiv~~~~Ts~e~~~~~~~~~~~lGk~pv~vkd~pG------fI~nRll---~al~~EA~~lv~ 194 (269)
....+.++.. -.++-++.+ ++++++++..+++.+|+.++.+.+ +| ++.|.+. .+.++|++.+.+
T Consensus 118 ~~pv~g~~~~a~~g~l~~~~gg---~~~~~~~~~~ll~~~g~~~~~~g~-~g~~~~~Kl~~N~~~~~~~~~~~Ea~~l~~ 193 (287)
T 3pdu_A 118 EAPVSGTKKPAEDGTLIILAAG---DQSLFTDAGPAFAALGKKCLHLGE-VGQGARMKLVVNMIMGQMMTALGEGMALGR 193 (287)
T ss_dssp ECCEECCHHHHHHTCEEEEEEE---CHHHHHHTHHHHHHHEEEEEECSS-TTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ECCccCCHHHHhcCCEEEEEeC---CHHHHHHHHHHHHHhCCCEEEcCC-CChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3322222210 123444443 689999999999999999998854 44 2345443 456799998876
Q ss_pred -cCCCHHHHHHHHH-hcCC
Q psy9059 195 -EGTSPKDLDRLTK-QFGF 211 (269)
Q Consensus 195 -eGis~edID~a~~-g~G~ 211 (269)
.|++++++..++. +.+.
T Consensus 194 ~~G~~~~~~~~~~~~~~~~ 212 (287)
T 3pdu_A 194 NCGLDGGQLLEVLDAGAMA 212 (287)
T ss_dssp HTTCCHHHHHHHHHHSTTC
T ss_pred HcCCCHHHHHHHHHhcccc
Confidence 5779999999987 6554
No 37
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=97.91 E-value=1.1e-05 Score=72.82 Aligned_cols=147 Identities=12% Similarity=0.037 Sum_probs=97.1
Q ss_pred EEecCHHHHhcCCCCceEEeecCCCcCCCchhHHH--HHHHhcCCCCcEEecCCCCCccccc--cc-CCC-CCCCeEEEe
Q psy9059 55 TYLYTYSERLMGSNGLAMVFPLQEQIPIQTPQQMS--ERIYMYTYSERLMGSNGLAMVFPLQ--EQ-IPI-QTPHLIIGM 128 (269)
Q Consensus 55 ~~~~~~~~a~~~~~~~~V~E~vpE~l~~K~k~~l~--~~l~~~~~~~~iiaSnTS~l~~p~~--~~-~~~-~~p~R~i~~ 128 (269)
.++.|++|++.++| +|+.++|+...++ .-++ ++|.+.++++++|...|+.. |.+ .+ ... .+.-+++.
T Consensus 53 ~~~~~~~e~~~~aD--vvi~~vp~~~~~~--~v~~~~~~l~~~l~~g~ivv~~st~~--~~~~~~~~~~~~~~g~~~~~- 125 (303)
T 3g0o_A 53 GAAASAREFAGVVD--ALVILVVNAAQVR--QVLFGEDGVAHLMKPGSAVMVSSTIS--SADAQEIAAALTALNLNMLD- 125 (303)
T ss_dssp EEESSSTTTTTTCS--EEEECCSSHHHHH--HHHC--CCCGGGSCTTCEEEECSCCC--HHHHHHHHHHHHTTTCEEEE-
T ss_pred cccCCHHHHHhcCC--EEEEECCCHHHHH--HHHhChhhHHhhCCCCCEEEecCCCC--HHHHHHHHHHHHHcCCeEEe-
Confidence 34889999997766 9999999976666 5444 66777788887776444432 322 12 112 22234444
Q ss_pred eccC-CCC---CCcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEEeccCc------hhHHHH---HHHHHHHHHHHHH-
Q psy9059 129 HYFS-PVD---KMQLLEIITTEQTSQDTAASAVAVGLKQGKVVITVKDGPG------FYTTRI---LSTMLSEAMRILQ- 194 (269)
Q Consensus 129 Hffn-P~~---~~~lVEiv~~~~Ts~e~~~~~~~~~~~lGk~pv~vkd~pG------fI~nRl---l~al~~EA~~lv~- 194 (269)
||.. .+. .-.++.++.+ ++++++++..+++.+|+.++.+.+.+| ++.|.+ ..+.++|++.+.+
T Consensus 126 ~pv~g~~~~a~~g~l~~~~gg---~~~~~~~~~~ll~~~g~~~~~~~~~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~~~ 202 (303)
T 3g0o_A 126 APVSGGAVKAAQGEMTVMASG---SEAAFTRLKPVLDAVASNVYRISDTPGAGSTVKIIHQLLAGVHIAAAAEAMALAAR 202 (303)
T ss_dssp CCEESCHHHHHTTCEEEEEEC---CHHHHHHHHHHHHHHEEEEEEEESSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCChhhhhcCCeEEEeCC---CHHHHHHHHHHHHHHCCCEEECCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5432 110 1134556554 689999999999999999998876455 244444 3456899998876
Q ss_pred cCCCHHHHHHHHH-hcCC
Q psy9059 195 EGTSPKDLDRLTK-QFGF 211 (269)
Q Consensus 195 eGis~edID~a~~-g~G~ 211 (269)
.|++++++..++. +.+.
T Consensus 203 ~G~d~~~~~~~~~~~~~~ 220 (303)
T 3g0o_A 203 AGIPLDVMYDVVTHAAGN 220 (303)
T ss_dssp TTCCHHHHHHHHTTSTTC
T ss_pred cCCCHHHHHHHHHhcccC
Confidence 5779999999986 6554
No 38
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=97.85 E-value=2.6e-05 Score=71.06 Aligned_cols=149 Identities=9% Similarity=0.033 Sum_probs=93.8
Q ss_pred CeEEecCHHHHhcCCCCceEEeecCCCcCCCchhHHHH-HHHhcCCCC-cEEecCCCCCcccccc-c-CCC-CCCCeEEE
Q psy9059 53 GITYLYTYSERLMGSNGLAMVFPLQEQIPIQTPQQMSE-RIYMYTYSE-RLMGSNGLAMVFPLQE-Q-IPI-QTPHLIIG 127 (269)
Q Consensus 53 ~l~~~~~~~~a~~~~~~~~V~E~vpE~l~~K~k~~l~~-~l~~~~~~~-~iiaSnTS~l~~p~~~-~-~~~-~~p~R~i~ 127 (269)
+++++.|++|++.++| +|+.++|+...++ .-++. ++.+.++++ .||.+||+.. ..++ + ..+ .+.-+++.
T Consensus 74 g~~~~~~~~e~~~~aD--vVi~~vp~~~~~~--~v~~~~~~~~~l~~~~~vi~~st~~~--~~~~~~~~~~~~~g~~~~~ 147 (320)
T 4dll_A 74 GATIHEQARAAARDAD--IVVSMLENGAVVQ--DVLFAQGVAAAMKPGSLFLDMASITP--REARDHAARLGALGIAHLD 147 (320)
T ss_dssp TCEEESSHHHHHTTCS--EEEECCSSHHHHH--HHHTTTCHHHHCCTTCEEEECSCCCH--HHHHHHHHHHHHTTCEEEE
T ss_pred CCEeeCCHHHHHhcCC--EEEEECCCHHHHH--HHHcchhHHhhCCCCCEEEecCCCCH--HHHHHHHHHHHHcCCEEEe
Confidence 5788999999998776 9999999877766 54442 444455555 4555555432 2222 2 111 12223433
Q ss_pred eeccCCC---CCCcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEEec-cCc----hhHHHHH---HHHHHHHHHHHH-c
Q psy9059 128 MHYFSPV---DKMQLLEIITTEQTSQDTAASAVAVGLKQGKVVITVKD-GPG----FYTTRIL---STMLSEAMRILQ-E 195 (269)
Q Consensus 128 ~HffnP~---~~~~lVEiv~~~~Ts~e~~~~~~~~~~~lGk~pv~vkd-~pG----fI~nRll---~al~~EA~~lv~-e 195 (269)
...+.++ ..-++..++.+ ++++++++..+++.+ +.++.+.+ ..| ++.|-+. .+.++|++.+.+ .
T Consensus 148 ~pv~g~~~~a~~g~l~i~~gg---~~~~~~~~~~ll~~~-~~~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~ 223 (320)
T 4dll_A 148 TPVSGGTVGAEQGTLVIMAGG---KPADFERSLPLLKVF-GRATHVGPHGSGQLTKLANQMIVGITIGAVAEALLFATKG 223 (320)
T ss_dssp CCEECHHHHHHHTCEEEEEES---CHHHHHHHHHHHHHH-EEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCcCCHhHHhcCCeeEEeCC---CHHHHHHHHHHHHhc-CCEEEeCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 2111111 11245666665 689999999999999 88888854 223 3444433 346899998876 5
Q ss_pred CCCHHHHHHHHH-hcCC
Q psy9059 196 GTSPKDLDRLTK-QFGF 211 (269)
Q Consensus 196 Gis~edID~a~~-g~G~ 211 (269)
|++++++..++. +.|.
T Consensus 224 G~d~~~~~~~~~~~~~~ 240 (320)
T 4dll_A 224 GADMAKVKEAITGGFAD 240 (320)
T ss_dssp SCCHHHHHHHHTTSTTC
T ss_pred CCCHHHHHHHHHccccc
Confidence 789999999986 6543
No 39
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=97.80 E-value=5.1e-05 Score=66.35 Aligned_cols=138 Identities=12% Similarity=0.106 Sum_probs=90.3
Q ss_pred CeEEecCHHHHhcCCCCceEEeecCCCcCCCchhHHHHHHHhcCCCCcEEecCCCCCccccccc-CCCCCCCeEEEeecc
Q psy9059 53 GITYLYTYSERLMGSNGLAMVFPLQEQIPIQTPQQMSERIYMYTYSERLMGSNGLAMVFPLQEQ-IPIQTPHLIIGMHYF 131 (269)
Q Consensus 53 ~l~~~~~~~~a~~~~~~~~V~E~vpE~l~~K~k~~l~~~l~~~~~~~~iiaSnTS~l~~p~~~~-~~~~~p~R~i~~Hff 131 (269)
++++..++.|++ ++| +|+.|+| .... ++++.++.+ + +++|.|.+|++ +...+ +.+..+.+++.. +.
T Consensus 45 g~~~~~~~~~~~-~~D--~vi~~v~--~~~~--~~v~~~l~~--~-~~ivv~~~~g~--~~~~l~~~~~~~~~~v~~-~~ 111 (263)
T 1yqg_A 45 GVETSATLPELH-SDD--VLILAVK--PQDM--EAACKNIRT--N-GALVLSVAAGL--SVGTLSRYLGGTRRIVRV-MP 111 (263)
T ss_dssp CCEEESSCCCCC-TTS--EEEECSC--HHHH--HHHHTTCCC--T-TCEEEECCTTC--CHHHHHHHTTSCCCEEEE-EC
T ss_pred CCEEeCCHHHHh-cCC--EEEEEeC--chhH--HHHHHHhcc--C-CCEEEEecCCC--CHHHHHHHcCCCCcEEEE-cC
Confidence 356667788887 655 9999999 3334 566666655 5 89999998988 44444 334444588888 44
Q ss_pred C-CCCCC-cEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEEe-cc--------CchhHHHHHHHHH---HHHHHHHHcCC
Q psy9059 132 S-PVDKM-QLLEIITTEQTSQDTAASAVAVGLKQGKVVITVK-DG--------PGFYTTRILSTML---SEAMRILQEGT 197 (269)
Q Consensus 132 n-P~~~~-~lVEiv~~~~Ts~e~~~~~~~~~~~lGk~pv~vk-d~--------pGfI~nRll~al~---~EA~~lv~eGi 197 (269)
| |.... ....++.+..++++.++.+.++++.+|+.+ .+. +. .| ..+..+..++ .|+ ....|+
T Consensus 112 ~~~~~~~~g~~~i~~~~~~~~~~~~~~~~l~~~~g~~~-~~~~~~~~~~~~al~g-~~~~~~~~~~~~l~e~--~~~~G~ 187 (263)
T 1yqg_A 112 NTPGKIGLGVSGMYAEAEVSETDRRIADRIMKSVGLTV-WLDDEEKMHGITGISG-SGPAYVFYLLDALQNA--AIRQGF 187 (263)
T ss_dssp CGGGGGTCEEEEEECCTTSCHHHHHHHHHHHHTTEEEE-ECSSTTHHHHHHHHTT-SHHHHHHHHHHHHHHH--HHHTTC
T ss_pred CHHHHHcCceEEEEcCCCCCHHHHHHHHHHHHhCCCEE-EeCChhhccHHHHHHc-cHHHHHHHHHHHHHHH--HHHcCC
Confidence 5 43332 366788888899999999999999999876 555 41 11 1111222222 333 456788
Q ss_pred CHHHHHHHHH
Q psy9059 198 SPKDLDRLTK 207 (269)
Q Consensus 198 s~edID~a~~ 207 (269)
+++++...+.
T Consensus 188 ~~~~~~~~~~ 197 (263)
T 1yqg_A 188 DMAEARALSL 197 (263)
T ss_dssp CHHHHHHHHH
T ss_pred CHHHHHHHHH
Confidence 8877776653
No 40
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=97.79 E-value=1.4e-05 Score=71.04 Aligned_cols=146 Identities=12% Similarity=0.089 Sum_probs=95.0
Q ss_pred CeEEecCHHHHhcCCCCceEEeecCCCcCCCchhHHHH--HHHhcCCCCcEEecCCCCCccccccc-CCCCCCCeEEEee
Q psy9059 53 GITYLYTYSERLMGSNGLAMVFPLQEQIPIQTPQQMSE--RIYMYTYSERLMGSNGLAMVFPLQEQ-IPIQTPHLIIGMH 129 (269)
Q Consensus 53 ~l~~~~~~~~a~~~~~~~~V~E~vpE~l~~K~k~~l~~--~l~~~~~~~~iiaSnTS~l~~p~~~~-~~~~~p~R~i~~H 129 (269)
+++...+++|++.++| +|+.++|...+++ .-+.+ ++.+.++++++|.+.+++.......+ ..+.. + +.|
T Consensus 45 g~~~~~~~~~~~~~~D--~vi~~vp~~~~~~--~v~~~~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~--~--g~~ 116 (295)
T 1yb4_A 45 GAVNVETARQVTEFAD--IIFIMVPDTPQVE--DVLFGEHGCAKTSLQGKTIVDMSSISPIETKRFAQRVNE--M--GAD 116 (295)
T ss_dssp TCBCCSSHHHHHHTCS--EEEECCSSHHHHH--HHHHSTTSSTTSCCTTEEEEECSCCCHHHHHHHHHHHHT--T--TEE
T ss_pred CCcccCCHHHHHhcCC--EEEEECCCHHHHH--HHHhCchhHhhcCCCCCEEEECCCCCHHHHHHHHHHHHH--c--CCe
Confidence 3566789999997766 9999999876665 43332 67777888888876655531112222 22221 1 344
Q ss_pred ccCCCCC--------CcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEEec-cCc----hhHHH---HHHHHHHHHHHHH
Q psy9059 130 YFSPVDK--------MQLLEIITTEQTSQDTAASAVAVGLKQGKVVITVKD-GPG----FYTTR---ILSTMLSEAMRIL 193 (269)
Q Consensus 130 ffnP~~~--------~~lVEiv~~~~Ts~e~~~~~~~~~~~lGk~pv~vkd-~pG----fI~nR---ll~al~~EA~~lv 193 (269)
+.+.|-. -.++.++.+ +++..+++..+++.+|+.++.+.+ ..| ++.|. +....++|++.+.
T Consensus 117 ~~~~p~~~~~~~a~~g~~~~~~~~---~~~~~~~~~~ll~~~g~~~~~~~~~~~~~~~Kl~~n~~~~~~~~~~~E~~~l~ 193 (295)
T 1yb4_A 117 YLDAPVSGGEIGAREGTLSIMVGG---EQKVFDRVKPLFDILGKNITLVGGNGDGQTCKVANQIIVALNIEAVSEALVFA 193 (295)
T ss_dssp EEECCEESHHHHHHHTCEEEEEES---CHHHHHHHHHHHHHHEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEccCCCCHHHHHcCCeEEEECC---CHHHHHHHHHHHHHhcCCEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4433221 134555554 788999999999999999888854 233 23343 3346889998877
Q ss_pred H-cCCCHHHHHHHHH-hc
Q psy9059 194 Q-EGTSPKDLDRLTK-QF 209 (269)
Q Consensus 194 ~-eGis~edID~a~~-g~ 209 (269)
+ .|+++++++.++. +.
T Consensus 194 ~~~G~~~~~~~~~~~~~~ 211 (295)
T 1yb4_A 194 SKAGADPVRVRQALMGGF 211 (295)
T ss_dssp HHTTCCHHHHHHHHTSSS
T ss_pred HHcCCCHHHHHHHHHcCC
Confidence 5 5789999998886 54
No 41
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=97.70 E-value=2.7e-05 Score=69.45 Aligned_cols=145 Identities=14% Similarity=0.058 Sum_probs=96.7
Q ss_pred CeEEecCHHHHhcCCCCceEEeecCCCcCCCchhHHH--HHHHhcCCCCcEEecCCCCCcccc--ccc-CCCC-CCCeEE
Q psy9059 53 GITYLYTYSERLMGSNGLAMVFPLQEQIPIQTPQQMS--ERIYMYTYSERLMGSNGLAMVFPL--QEQ-IPIQ-TPHLII 126 (269)
Q Consensus 53 ~l~~~~~~~~a~~~~~~~~V~E~vpE~l~~K~k~~l~--~~l~~~~~~~~iiaSnTS~l~~p~--~~~-~~~~-~p~R~i 126 (269)
+++...+++|++.++| +|+.++|....++ .-+. .+|.+.++++++|.+.+++. |. ..+ +.+. +.-+++
T Consensus 47 g~~~~~~~~~~~~~~D--~vi~~vp~~~~~~--~v~~~~~~l~~~l~~~~~vv~~~~~~--~~~~~~l~~~~~~~g~~~~ 120 (301)
T 3cky_A 47 GAQACENNQKVAAASD--IIFTSLPNAGIVE--TVMNGPGGVLSACKAGTVIVDMSSVS--PSSTLKMAKVAAEKGIDYV 120 (301)
T ss_dssp TCEECSSHHHHHHHCS--EEEECCSSHHHHH--HHHHSTTCHHHHSCTTCEEEECCCCC--HHHHHHHHHHHHHTTCEEE
T ss_pred CCeecCCHHHHHhCCC--EEEEECCCHHHHH--HHHcCcchHhhcCCCCCEEEECCCCC--HHHHHHHHHHHHHcCCeEE
Confidence 4567789999997766 9999999877666 5554 37778889999998887775 32 222 2222 122444
Q ss_pred EeeccCCCC----CCcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEEec-cCchh----HHHH---HHHHHHHHHHHHH
Q psy9059 127 GMHYFSPVD----KMQLLEIITTEQTSQDTAASAVAVGLKQGKVVITVKD-GPGFY----TTRI---LSTMLSEAMRILQ 194 (269)
Q Consensus 127 ~~HffnP~~----~~~lVEiv~~~~Ts~e~~~~~~~~~~~lGk~pv~vkd-~pGfI----~nRl---l~al~~EA~~lv~ 194 (269)
. ++..+.. .-.+..++.+ +++.++.+.++++.+|+.++.+.+ ..|.. .|.+ +...++|++.+.+
T Consensus 121 ~-~p~~~~~~~a~~g~~~~~~~g---~~~~~~~v~~ll~~~g~~~~~~~~~g~~~~~Kl~~N~~~~~~~~~~~Ea~~l~~ 196 (301)
T 3cky_A 121 D-APVSGGTKGAEAGTLTIMVGA---SEAVFEKIQPVLSVIGKDIYHVGDTGAGDAVKIVNNLLLGCNMASLAEALVLGV 196 (301)
T ss_dssp E-CCEESHHHHHHHTCEEEEEES---CHHHHHHHHHHHHHHEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred E-ccCCCCHHHHHcCCeEEEECC---CHHHHHHHHHHHHHhcCCEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3 2221110 0113444544 788999999999999999887743 34433 4554 5568999988765
Q ss_pred -cCCCHHHHHHHHH
Q psy9059 195 -EGTSPKDLDRLTK 207 (269)
Q Consensus 195 -eGis~edID~a~~ 207 (269)
.|+++++++.++.
T Consensus 197 ~~G~~~~~~~~~~~ 210 (301)
T 3cky_A 197 KCGLKPETMQEIIG 210 (301)
T ss_dssp HTTCCHHHHHHHHH
T ss_pred HcCCCHHHHHHHHH
Confidence 6889999988876
No 42
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=97.69 E-value=0.00019 Score=62.72 Aligned_cols=139 Identities=9% Similarity=0.110 Sum_probs=89.9
Q ss_pred eEEecCHHHHhcCCCCceEEeecCCCcCCCchhHHHHHHHhcCCCCcEEecCCCCCccccccc-CCCCCCCeEEEeeccC
Q psy9059 54 ITYLYTYSERLMGSNGLAMVFPLQEQIPIQTPQQMSERIYMYTYSERLMGSNGLAMVFPLQEQ-IPIQTPHLIIGMHYFS 132 (269)
Q Consensus 54 l~~~~~~~~a~~~~~~~~V~E~vpE~l~~K~k~~l~~~l~~~~~~~~iiaSnTS~l~~p~~~~-~~~~~p~R~i~~Hffn 132 (269)
++...++.|++.++| +|+.++|. ... .+++.++ .+++++.+.++++ +.+.+ +...+..+++..|+..
T Consensus 48 ~~~~~~~~~~~~~~D--~Vi~~v~~--~~~--~~v~~~l----~~~~~vv~~~~~~--~~~~l~~~~~~~~~~v~~~p~~ 115 (259)
T 2ahr_A 48 LPYAMSHQDLIDQVD--LVILGIKP--QLF--ETVLKPL----HFKQPIISMAAGI--SLQRLATFVGQDLPLLRIMPNM 115 (259)
T ss_dssp CCBCSSHHHHHHTCS--EEEECSCG--GGH--HHHHTTS----CCCSCEEECCTTC--CHHHHHHHHCTTSCEEEEECCG
T ss_pred CEeeCCHHHHHhcCC--EEEEEeCc--HhH--HHHHHHh----ccCCEEEEeCCCC--CHHHHHHhcCCCCCEEEEcCCc
Confidence 445678999997666 99999994 333 5555543 3677888888777 44443 2233445788888877
Q ss_pred CCCCCc-EEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEEeccC--ch-----hHHHHHHHHHHHHH--HHHHcCCCHHHH
Q psy9059 133 PVDKMQ-LLEIITTEQTSQDTAASAVAVGLKQGKVVITVKDGP--GF-----YTTRILSTMLSEAM--RILQEGTSPKDL 202 (269)
Q Consensus 133 P~~~~~-lVEiv~~~~Ts~e~~~~~~~~~~~lGk~pv~vkd~p--Gf-----I~nRll~al~~EA~--~lv~eGis~edI 202 (269)
|..... ...++.+..++++..+.+.++++.+| .++.+.+.. .. -.+.....+. +++ .+...|++++++
T Consensus 116 ~~~~~~g~~~i~~~~~~~~~~~~~~~~ll~~~G-~~~~~~~~~~d~~~al~g~~~~~~~~~~-~~la~~~~~~Gl~~~~~ 193 (259)
T 2ahr_A 116 NAQILQSSTALTGNALVSQELQARVRDLTDSFG-STFDISEKDFDTFTALAGSSPAYIYLFI-EALAKAGVKNGIPKAKA 193 (259)
T ss_dssp GGGGTCEEEEEEECTTCCHHHHHHHHHHHHTTE-EEEECCGGGHHHHHHHHTTHHHHHHHHH-HHHHHHHHHTTCCHHHH
T ss_pred hHHHcCceEEEEcCCCCCHHHHHHHHHHHHhCC-CEEEecHHHccHHHHHhccHHHHHHHHH-HHHHHHHHHcCCCHHHH
Confidence 766543 67788888899999999999999999 466664321 00 0111222222 332 255678877766
Q ss_pred HHHH
Q psy9059 203 DRLT 206 (269)
Q Consensus 203 D~a~ 206 (269)
-.++
T Consensus 194 ~~~~ 197 (259)
T 2ahr_A 194 LEIV 197 (259)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5554
No 43
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=97.67 E-value=6.5e-05 Score=71.39 Aligned_cols=147 Identities=10% Similarity=-0.014 Sum_probs=97.3
Q ss_pred CcCeEEecCHHHHhcCCCCceEEeecCCCcC---------CCchhHHHHHHHhcCCC---CcEEecCCCCCcccc-cc-c
Q psy9059 51 HTGITYLYTYSERLMGSNGLAMVFPLQEQIP---------IQTPQQMSERIYMYTYS---ERLMGSNGLAMVFPL-QE-Q 116 (269)
Q Consensus 51 ~~~l~~~~~~~~a~~~~~~~~V~E~vpE~l~---------~K~k~~l~~~l~~~~~~---~~iiaSnTS~l~~p~-~~-~ 116 (269)
.|++++++++++++.++| +|+.|||...+ ++ +++++|.+++++ +++|.. +|+...-. .+ +
T Consensus 61 ~g~l~~t~~~~~~~~~aD--vviiaVptp~~~~~~~dl~~v~---~v~~~i~~~l~~~~~~~iVV~-~Stv~~g~t~~~l 134 (436)
T 1mv8_A 61 TGRLSGTTDFKKAVLDSD--VSFICVGTPSKKNGDLDLGYIE---TVCREIGFAIREKSERHTVVV-RSTVLPGTVNNVV 134 (436)
T ss_dssp TTCEEEESCHHHHHHTCS--EEEECCCCCBCTTSSBCCHHHH---HHHHHHHHHHTTCCSCCEEEE-CSCCCTTHHHHTH
T ss_pred cCceEEeCCHHHHhccCC--EEEEEcCCCcccCCCcchHHHH---HHHHHHHHHhcccCCCcEEEE-eCCcCCCchHHHH
Confidence 367999999999998766 99999998775 44 567899988888 777753 33331111 11 1
Q ss_pred C-CCCC--CC----eEEEeeccCCCCCCcEE---------EEeCCCCCCHHHHHHHHHHHHhCCcEEEEEecc-----Cc
Q psy9059 117 I-PIQT--PH----LIIGMHYFSPVDKMQLL---------EIITTEQTSQDTAASAVAVGLKQGKVVITVKDG-----PG 175 (269)
Q Consensus 117 ~-~~~~--p~----R~i~~HffnP~~~~~lV---------Eiv~~~~Ts~e~~~~~~~~~~~lGk~pv~vkd~-----pG 175 (269)
. .+.. .. .+.+ .++|..+.+-. .++.|. ++++..+.+.++++.+|+ ++.+.+. ..
T Consensus 135 ~~~l~~~~g~~~~~~~~v--~~~Pe~~~~G~~~~~~~~~~~iv~G~-~~~~~~~~~~~l~~~~~~-~v~~~~~~~ae~~K 210 (436)
T 1mv8_A 135 IPLIEDCSGKKAGVDFGV--GTNPEFLRESTAIKDYDFPPMTVIGE-LDKQTGDLLEEIYRELDA-PIIRKTVEVAEMIK 210 (436)
T ss_dssp HHHHHHHHSCCBTTTBEE--EECCCCCCTTSHHHHHHSCSCEEEEE-SSHHHHHHHHHHHTTSSS-CEEEEEHHHHHHHH
T ss_pred HHHHHHhcCcccCCcEEE--EECcccccccccchhccCCCEEEEEc-CCHHHHHHHHHHHhccCC-CEEcCCHHHHHHHH
Confidence 1 1110 11 1111 24666554432 345444 478999999999999998 5555432 34
Q ss_pred hhHHHHH---HHHHHHHHHHHHc-CCCHHHHHHHHH
Q psy9059 176 FYTTRIL---STMLSEAMRILQE-GTSPKDLDRLTK 207 (269)
Q Consensus 176 fI~nRll---~al~~EA~~lv~e-Gis~edID~a~~ 207 (269)
++.|.+. .+++||+..+.+. |+++++++.++.
T Consensus 211 l~~N~~~a~~ia~~nE~~~l~~~~Gid~~~v~~~~~ 246 (436)
T 1mv8_A 211 YTCNVWHAAKVTFANEIGNIAKAVGVDGREVMDVIC 246 (436)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhc
Confidence 5666654 6889999988864 779999999874
No 44
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=97.66 E-value=3.9e-05 Score=68.25 Aligned_cols=111 Identities=6% Similarity=0.024 Sum_probs=82.1
Q ss_pred EEecCHHHHhcCCCCceEEeecCCCcCCCchhHHHHHHHhc-CCCCcEEecCCCCCccccccc-CCCCC-CCeEEEeecc
Q psy9059 55 TYLYTYSERLMGSNGLAMVFPLQEQIPIQTPQQMSERIYMY-TYSERLMGSNGLAMVFPLQEQ-IPIQT-PHLIIGMHYF 131 (269)
Q Consensus 55 ~~~~~~~~a~~~~~~~~V~E~vpE~l~~K~k~~l~~~l~~~-~~~~~iiaSnTS~l~~p~~~~-~~~~~-p~R~i~~Hff 131 (269)
..+.+++|++.++| +|+.|+|... - ++++.++.++ ++++++|.+.+|+.......+ ..+.. ..|+++.||.
T Consensus 55 ~~~~~~~~~~~~aD--vVilavp~~~--~--~~v~~~l~~~~l~~~~ivi~~~~~~~~~~~~l~~~l~~~~~~~v~~~P~ 128 (290)
T 3b1f_A 55 EATADFKVFAALAD--VIILAVPIKK--T--IDFIKILADLDLKEDVIITDAGSTKYEIVRAAEYYLKDKPVQFVGSHPM 128 (290)
T ss_dssp EEESCTTTTGGGCS--EEEECSCHHH--H--HHHHHHHHTSCCCTTCEEECCCSCHHHHHHHHHHHHTTSSCEEEEEEEC
T ss_pred cccCCHHHhhcCCC--EEEEcCCHHH--H--HHHHHHHHhcCCCCCCEEEECCCCchHHHHHHHHhccccCCEEEEeCCc
Confidence 45678888887666 9999999853 2 5788889888 888998886544321012222 22232 6799999998
Q ss_pred ------CCCC------CCcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEEe
Q psy9059 132 ------SPVD------KMQLLEIITTEQTSQDTAASAVAVGLKQGKVVITVK 171 (269)
Q Consensus 132 ------nP~~------~~~lVEiv~~~~Ts~e~~~~~~~~~~~lGk~pv~vk 171 (269)
.|.. ....+.++++..++++..+.+.++++.+|+.++.+.
T Consensus 129 ~g~~~~g~~~a~~~l~~g~~~~~~~~~~~~~~~~~~v~~l~~~~G~~~~~~~ 180 (290)
T 3b1f_A 129 AGSHKSGAVAANVNLFENAYYIFSPSCLTKPNTIPALQDLLSGLHARYVEID 180 (290)
T ss_dssp -----CCTTSCCTTTTTTSEEEEEECTTCCTTHHHHHHHHTGGGCCEEEECC
T ss_pred CCCCcchHHHhhHHHhCCCeEEEecCCCCCHHHHHHHHHHHHHcCCEEEEcC
Confidence 5653 235688999888999999999999999999888774
No 45
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=97.61 E-value=3.5e-05 Score=71.63 Aligned_cols=111 Identities=8% Similarity=0.020 Sum_probs=80.2
Q ss_pred EEecCHHHHhcCC--CCceEEeecCCCcCCCchhHHHHHHHhcCCCCcEEecCCCCCcccccccCCCCCCCeEEEeeccC
Q psy9059 55 TYLYTYSERLMGS--NGLAMVFPLQEQIPIQTPQQMSERIYMYTYSERLMGSNGLAMVFPLQEQIPIQTPHLIIGMHYFS 132 (269)
Q Consensus 55 ~~~~~~~~a~~~~--~~~~V~E~vpE~l~~K~k~~l~~~l~~~~~~~~iiaSnTS~l~~p~~~~~~~~~p~R~i~~Hffn 132 (269)
..+.+++|++.++ ++|+|+.|+|- +.. .+++++|..+ ++++||...+|.-..++..+.......|+++.||..
T Consensus 53 ~~~~~~~e~~~~a~~~aDlVilavP~--~~~--~~vl~~l~~~-~~~~iv~Dv~Svk~~i~~~~~~~~~~~~~v~~HPma 127 (341)
T 3ktd_A 53 DVSADLEATLQRAAAEDALIVLAVPM--TAI--DSLLDAVHTH-APNNGFTDVVSVKTAVYDAVKARNMQHRYVGSHPMA 127 (341)
T ss_dssp CEESCHHHHHHHHHHTTCEEEECSCH--HHH--HHHHHHHHHH-CTTCCEEECCSCSHHHHHHHHHTTCGGGEECEEECC
T ss_pred eeeCCHHHHHHhcccCCCEEEEeCCH--HHH--HHHHHHHHcc-CCCCEEEEcCCCChHHHHHHHHhCCCCcEecCCccc
Confidence 4567888888653 45699999994 456 8999999987 888988655443211233332221247999999976
Q ss_pred CCCC------------CcEEEEeCCCCCCHH--------HHHHHHHHHHhCCcEEEEE
Q psy9059 133 PVDK------------MQLLEIITTEQTSQD--------TAASAVAVGLKQGKVVITV 170 (269)
Q Consensus 133 P~~~------------~~lVEiv~~~~Ts~e--------~~~~~~~~~~~lGk~pv~v 170 (269)
.+.. ...+-+++++.++++ .++.+..+++.+|+.++.+
T Consensus 128 G~e~sG~~aa~~~Lf~g~~~iltp~~~~~~e~~~~~~~~~~~~v~~l~~~~Ga~v~~~ 185 (341)
T 3ktd_A 128 GTANSGWSASMDGLFKRAVWVVTFDQLFDGTDINSTWISIWKDVVQMALAVGAEVVPS 185 (341)
T ss_dssp SCC-CCGGGCCSSTTTTCEEEECCGGGTSSCCCCHHHHHHHHHHHHHHHHTTCEEEEC
T ss_pred cccccchhhhhhHHhcCCeEEEEeCCCCChhhhccchHHHHHHHHHHHHHcCCEEEEe
Confidence 5531 124558999999988 9999999999999999988
No 46
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=97.60 E-value=0.00065 Score=59.16 Aligned_cols=107 Identities=12% Similarity=0.062 Sum_probs=76.5
Q ss_pred cCeEEecCHHHHhcCCCCceEEeecCCCcCCCchhHHHHHHHhcCCCCcEEecCCCCCccccccc-CCCCCCCeEE---E
Q psy9059 52 TGITYLYTYSERLMGSNGLAMVFPLQEQIPIQTPQQMSERIYMYTYSERLMGSNGLAMVFPLQEQ-IPIQTPHLII---G 127 (269)
Q Consensus 52 ~~l~~~~~~~~a~~~~~~~~V~E~vpE~l~~K~k~~l~~~l~~~~~~~~iiaSnTS~l~~p~~~~-~~~~~p~R~i---~ 127 (269)
-+++...+.+|++.++| +|+.|+|. ... ++++.++.+++ ++.+|.|.++++ +.+.+ .......+++ .
T Consensus 44 ~g~~~~~~~~~~~~~~D--~vi~~v~~--~~~--~~v~~~l~~~l-~~~~vv~~~~gi--~~~~l~~~~~~~~~~v~~~p 114 (262)
T 2rcy_A 44 TTLNYMSSNEELARHCD--IIVCAVKP--DIA--GSVLNNIKPYL-SSKLLISICGGL--NIGKLEEMVGSENKIVWVMP 114 (262)
T ss_dssp SSSEECSCHHHHHHHCS--EEEECSCT--TTH--HHHHHHSGGGC-TTCEEEECCSSC--CHHHHHHHHCTTSEEEEEEC
T ss_pred CceEEeCCHHHHHhcCC--EEEEEeCH--HHH--HHHHHHHHHhc-CCCEEEEECCCC--CHHHHHHHhCCCCcEEEECC
Confidence 35777889999997766 99999996 456 89999999888 677888888887 44433 2223322433 2
Q ss_pred eeccCCCCCC-cEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEEe
Q psy9059 128 MHYFSPVDKM-QLLEIITTEQTSQDTAASAVAVGLKQGKVVITVK 171 (269)
Q Consensus 128 ~HffnP~~~~-~lVEiv~~~~Ts~e~~~~~~~~~~~lGk~pv~vk 171 (269)
.|+. ... .+.-+++++.++++.++.+..+++.+|+ ++.+.
T Consensus 115 ~~p~---~~~~g~~~~~~~~~~~~~~~~~~~~ll~~~G~-~~~~~ 155 (262)
T 2rcy_A 115 NTPC---LVGEGSFIYCSNKNVNSTDKKYVNDIFNSCGI-IHEIK 155 (262)
T ss_dssp CGGG---GGTCEEEEEEECTTCCHHHHHHHHHHHHTSEE-EEECC
T ss_pred ChHH---HHcCCeEEEEeCCCCCHHHHHHHHHHHHhCCC-EEEeC
Confidence 3332 222 2444667888899999999999999997 77774
No 47
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=97.55 E-value=9e-05 Score=65.94 Aligned_cols=148 Identities=11% Similarity=0.103 Sum_probs=94.3
Q ss_pred CeEEecCHHHHhcCCCCceEEeecCCCcCCCchhHHH--HHHHhcCCCCcEEecCCCCCcccc--ccc-CCCC-CCCeEE
Q psy9059 53 GITYLYTYSERLMGSNGLAMVFPLQEQIPIQTPQQMS--ERIYMYTYSERLMGSNGLAMVFPL--QEQ-IPIQ-TPHLII 126 (269)
Q Consensus 53 ~l~~~~~~~~a~~~~~~~~V~E~vpE~l~~K~k~~l~--~~l~~~~~~~~iiaSnTS~l~~p~--~~~-~~~~-~p~R~i 126 (269)
+++...+++|++.++| +|+.++|....++ .-++ .+|.+.+++++++.+-+++. |. ..+ +.+. +.-+++
T Consensus 48 g~~~~~~~~~~~~~~D--~vi~~v~~~~~~~--~~~~~~~~l~~~l~~~~~vv~~s~~~--~~~~~~l~~~~~~~g~~~~ 121 (299)
T 1vpd_A 48 GAETASTAKAIAEQCD--VIITMLPNSPHVK--EVALGENGIIEGAKPGTVLIDMSSIA--PLASREISDALKAKGVEML 121 (299)
T ss_dssp TCEECSSHHHHHHHCS--EEEECCSSHHHHH--HHHHSTTCHHHHCCTTCEEEECSCCC--HHHHHHHHHHHHTTTCEEE
T ss_pred CCeecCCHHHHHhCCC--EEEEECCCHHHHH--HHHhCcchHhhcCCCCCEEEECCCCC--HHHHHHHHHHHHHcCCeEE
Confidence 4677889999997766 9999999866666 5444 57778888898887655554 32 222 2221 122333
Q ss_pred Eeecc--CCCC-CCcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEEec-cCchh---HHHHH----HHHHHHHHHHHH-
Q psy9059 127 GMHYF--SPVD-KMQLLEIITTEQTSQDTAASAVAVGLKQGKVVITVKD-GPGFY---TTRIL----STMLSEAMRILQ- 194 (269)
Q Consensus 127 ~~Hff--nP~~-~~~lVEiv~~~~Ts~e~~~~~~~~~~~lGk~pv~vkd-~pGfI---~nRll----~al~~EA~~lv~- 194 (269)
.. +. +|+. ...-+.++.+. +++..+.+..+++.+|+.++.+.+ ..|.. ++..+ ...++|++.+.+
T Consensus 122 ~~-pv~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ll~~~g~~~~~~~~~~~~~~~Kl~~n~~~~~~~~~~~Ea~~l~~~ 198 (299)
T 1vpd_A 122 DA-PVSGGEPKAIDGTLSVMVGG--DKAIFDKYYDLMKAMAGSVVHTGDIGAGNVTKLANQVIVALNIAAMSEALTLATK 198 (299)
T ss_dssp EC-CEESHHHHHHHTCEEEEEES--CHHHHHHHHHHHHTTEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred Ee-cCCCCHhHHhcCCEEEEeCC--CHHHHHHHHHHHHHHcCCeEEeCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22 11 1110 01113444443 789999999999999999988843 44443 13333 368899988754
Q ss_pred cCCCHHHHHHHHH-hc
Q psy9059 195 EGTSPKDLDRLTK-QF 209 (269)
Q Consensus 195 eGis~edID~a~~-g~ 209 (269)
.|+++++++.++. +.
T Consensus 199 ~G~~~~~~~~~~~~~~ 214 (299)
T 1vpd_A 199 AGVNPDLVYQAIRGGL 214 (299)
T ss_dssp TTCCHHHHHHHHTTST
T ss_pred cCCCHHHHHHHHHccC
Confidence 6889999998875 54
No 48
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=97.55 E-value=0.00016 Score=63.70 Aligned_cols=117 Identities=11% Similarity=-0.060 Sum_probs=82.3
Q ss_pred EEecCHHHHhcCCCCceEEeecCCCcCCCchhHHHHHHHhcCCCCcEEecCCCCCcc-cccccCCCCCCCeEEEeeccCC
Q psy9059 55 TYLYTYSERLMGSNGLAMVFPLQEQIPIQTPQQMSERIYMYTYSERLMGSNGLAMVF-PLQEQIPIQTPHLIIGMHYFSP 133 (269)
Q Consensus 55 ~~~~~~~~a~~~~~~~~V~E~vpE~l~~K~k~~l~~~l~~~~~~~~iiaSnTS~l~~-p~~~~~~~~~p~R~i~~HffnP 133 (269)
....+++++ .++| +|+.|+|.. .. .+++.++.++++++++|.+- |+.+. ....+.. ...|++..||...
T Consensus 47 ~~~~~~~~~-~~~D--~vi~av~~~--~~--~~~~~~l~~~~~~~~~vv~~-~~~~~~~~~~~~~--~~~~~~~~~p~~g 116 (279)
T 2f1k_A 47 EAGQDLSLL-QTAK--IIFLCTPIQ--LI--LPTLEKLIPHLSPTAIVTDV-ASVKTAIAEPASQ--LWSGFIGGHPMAG 116 (279)
T ss_dssp EEESCGGGG-TTCS--EEEECSCHH--HH--HHHHHHHGGGSCTTCEEEEC-CSCCHHHHHHHHH--HSTTCEEEEECCC
T ss_pred cccCCHHHh-CCCC--EEEEECCHH--HH--HHHHHHHHhhCCCCCEEEEC-CCCcHHHHHHHHH--HhCCEeecCcccC
Confidence 356678887 6655 999999974 45 78999999999999988664 44411 1111211 1228999998762
Q ss_pred CC------------CCcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEEec-cCchhHHHH
Q psy9059 134 VD------------KMQLLEIITTEQTSQDTAASAVAVGLKQGKVVITVKD-GPGFYTTRI 181 (269)
Q Consensus 134 ~~------------~~~lVEiv~~~~Ts~e~~~~~~~~~~~lGk~pv~vkd-~pGfI~nRl 181 (269)
.. ..+.+.+++++.++++..+.+.++++.+|..++.+.+ ..+.+...+
T Consensus 117 ~~~~gp~~a~~~~~~g~~~~~~~~~~~~~~~~~~v~~l~~~~g~~~~~~~~~~~~~~~~~~ 177 (279)
T 2f1k_A 117 TAAQGIDGAEENLFVNAPYVLTPTEYTDPEQLACLRSVLEPLGVKIYLCTPADHDQAVAWI 177 (279)
T ss_dssp CSCSSGGGCCTTTTTTCEEEEEECTTCCHHHHHHHHHHHGGGTCEEEECCHHHHHHHHHHH
T ss_pred CccCCHHHHhHHHhCCCcEEEecCCCCCHHHHHHHHHHHHHcCCEEEEcCHHHHHHHHHHH
Confidence 21 2247889998889999999999999999999888843 334444444
No 49
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=97.53 E-value=0.00021 Score=65.80 Aligned_cols=137 Identities=9% Similarity=0.119 Sum_probs=90.7
Q ss_pred eEEecCHHHHhcCCCCceEEeecCCCcCCCchhHHHH-HHHhcCCCCcEEecCCCCCcccccccCCCCCC--CeEEEeec
Q psy9059 54 ITYLYTYSERLMGSNGLAMVFPLQEQIPIQTPQQMSE-RIYMYTYSERLMGSNGLAMVFPLQEQIPIQTP--HLIIGMHY 130 (269)
Q Consensus 54 l~~~~~~~~a~~~~~~~~V~E~vpE~l~~K~k~~l~~-~l~~~~~~~~iiaSnTS~l~~p~~~~~~~~~p--~R~i~~Hf 130 (269)
++.. +++|++.++| +|+.|+|... - .+++. +|.++++++++|.+. +|+ .. .......| -++++.||
T Consensus 61 ~~~~-~~~e~~~~aD--vVilavp~~~--~--~~v~~~~i~~~l~~~~ivi~~-~gv--~~-~~~~~~~~~~~~vv~~~P 129 (338)
T 1np3_A 61 LKVA-DVKTAVAAAD--VVMILTPDEF--Q--GRLYKEEIEPNLKKGATLAFA-HGF--SI-HYNQVVPRADLDVIMIAP 129 (338)
T ss_dssp CEEE-CHHHHHHTCS--EEEECSCHHH--H--HHHHHHHTGGGCCTTCEEEES-CCH--HH-HTTSSCCCTTCEEEEEEE
T ss_pred CEEc-cHHHHHhcCC--EEEEeCCcHH--H--HHHHHHHHHhhCCCCCEEEEc-CCc--hh-HHHhhcCCCCcEEEeccC
Confidence 4555 8999998766 9999999854 3 67887 898899999999876 445 33 32223233 35999999
Q ss_pred cCCCCC----------CcEEEEeCCCCCCHHHHHHHHHHHHhCCc-E--EEEEe-----ccCchhHHHH----HHHHHHH
Q psy9059 131 FSPVDK----------MQLLEIITTEQTSQDTAASAVAVGLKQGK-V--VITVK-----DGPGFYTTRI----LSTMLSE 188 (269)
Q Consensus 131 fnP~~~----------~~lVEiv~~~~Ts~e~~~~~~~~~~~lGk-~--pv~vk-----d~pGfI~nRl----l~al~~E 188 (269)
..|... .+.+ ++++..++++..+.+.++++.+|. . ++.+. +...++.++. +..++..
T Consensus 130 ~gp~~a~~~l~~~G~g~~~i-i~~~~~~~~~a~~~~~~l~~~lG~~~agv~~~~~~~~~~~~~~~s~~~l~G~lp~~ia~ 208 (338)
T 1np3_A 130 KAPGHTVRSEFVKGGGIPDL-IAIYQDASGNAKNVALSYACGVGGGRTGIIETTFKDETETDLFGEQAVLCGGCVELVKA 208 (338)
T ss_dssp SSCSHHHHHHHHTTCCCCEE-EEEEECSSSCHHHHHHHHHHHTTHHHHCEEECCHHHHHHHHHHHHHHTTTHHHHHHHHH
T ss_pred CCCchhHHHHHhccCCCeEE-EEecCCCCHHHHHHHHHHHHHcCCCccceEeechhcccchHHHHHHHHHhhhHHHHHHH
Confidence 777642 2222 667777888999999999999998 3 55542 1234432222 3444444
Q ss_pred HH-HHHHcCCCHHHH
Q psy9059 189 AM-RILQEGTSPKDL 202 (269)
Q Consensus 189 A~-~lv~eGis~edI 202 (269)
++ .+++.|+++++.
T Consensus 209 ~~e~l~~~Gl~~~~a 223 (338)
T 1np3_A 209 GFETLVEAGYAPEMA 223 (338)
T ss_dssp HHHHHHHTTCCHHHH
T ss_pred HHHHHHHcCCCHHHH
Confidence 44 446788876543
No 50
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=97.50 E-value=7.9e-05 Score=62.99 Aligned_cols=110 Identities=6% Similarity=0.025 Sum_probs=76.3
Q ss_pred cCeEEecCHHHHhcCCCCceEEeecCCCcCCCchhHHHHHHHhcCCCCcEEecCCCCCcc-------c-----cccc-CC
Q psy9059 52 TGITYLYTYSERLMGSNGLAMVFPLQEQIPIQTPQQMSERIYMYTYSERLMGSNGLAMVF-------P-----LQEQ-IP 118 (269)
Q Consensus 52 ~~l~~~~~~~~a~~~~~~~~V~E~vpE~l~~K~k~~l~~~l~~~~~~~~iiaSnTS~l~~-------p-----~~~~-~~ 118 (269)
+.+++ .++.+++.++| +|+.++|... - ++++.++.+.++ ++++.+.+++++. + .+++ +.
T Consensus 51 ~~~~~-~~~~~~~~~~D--~Vi~~~~~~~--~--~~~~~~l~~~~~-~~~vi~~~~g~~~~~~~~~~~~g~~~~~~l~~~ 122 (212)
T 1jay_A 51 ASITG-MKNEDAAEACD--IAVLTIPWEH--A--IDTARDLKNILR-EKIVVSPLVPVSRGAKGFTYSSERSAAEIVAEV 122 (212)
T ss_dssp CCEEE-EEHHHHHHHCS--EEEECSCHHH--H--HHHHHHTHHHHT-TSEEEECCCCEECCTTCCEECCSSCHHHHHHHH
T ss_pred CCCCh-hhHHHHHhcCC--EEEEeCChhh--H--HHHHHHHHHHcC-CCEEEEcCCCcCcCCceeecCCCCcHHHHHHHh
Confidence 34553 68999997766 9999999643 4 578888877775 8999999988731 0 2233 22
Q ss_pred CCCCCeEEEeeccCCCCCC-------cEEEEeCCCCCCHHHHHHHHHHHHhC-CcEEEEEec
Q psy9059 119 IQTPHLIIGMHYFSPVDKM-------QLLEIITTEQTSQDTAASAVAVGLKQ-GKVVITVKD 172 (269)
Q Consensus 119 ~~~p~R~i~~HffnP~~~~-------~lVEiv~~~~Ts~e~~~~~~~~~~~l-Gk~pv~vkd 172 (269)
.. ..+++..|+..|.... .+..++.++ +++..+.+.++++.+ |+.++.+.+
T Consensus 123 ~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~g~--~~~~~~~v~~l~~~~~G~~~~~~~~ 181 (212)
T 1jay_A 123 LE-SEKVVSALHTIPAARFANLDEKFDWDVPVCGD--DDESKKVVMSLISEIDGLRPLDAGP 181 (212)
T ss_dssp HT-CSCEEECCTTCCHHHHHCTTCCCCEEEEEEES--CHHHHHHHHHHHHHSTTEEEEEEES
T ss_pred CC-CCeEEEEccchHHHHhhCcCCCCCccEEEECC--cHHHHHHHHHHHHHcCCCCceeccc
Confidence 32 3677766543332221 256677776 689999999999999 999998865
No 51
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=97.50 E-value=3.7e-05 Score=70.92 Aligned_cols=72 Identities=15% Similarity=0.299 Sum_probs=56.1
Q ss_pred CcCeEEecCHHHHhcCCCCceEEeec--CCCcCC---------------CchhHHHHHHHhcCCCCcEE--ecCCCCCcc
Q psy9059 51 HTGITYLYTYSERLMGSNGLAMVFPL--QEQIPI---------------QTPQQMSERIYMYTYSERLM--GSNGLAMVF 111 (269)
Q Consensus 51 ~~~l~~~~~~~~a~~~~~~~~V~E~v--pE~l~~---------------K~k~~l~~~l~~~~~~~~ii--aSnTS~l~~ 111 (269)
..+++++.+++++++++| +|++++ |++... +.+++++++|++++ |++++ +||++++
T Consensus 63 ~~~i~~t~d~~ea~~~aD--iVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~vi~~tNP~~~-- 137 (331)
T 1pzg_A 63 NVSVRAEYSYEAALTGAD--CVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYC-PKTFIIVVTNPLDC-- 137 (331)
T ss_dssp CCCEEEECSHHHHHTTCS--EEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHC-TTCEEEECCSSHHH--
T ss_pred CCEEEEeCCHHHHhCCCC--EEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCcEEEEEcCchHH--
Confidence 468999999999998877 999999 877665 22399999999998 77776 8999986
Q ss_pred ccccc--CCCC-CCCeEEEe
Q psy9059 112 PLQEQ--IPIQ-TPHLIIGM 128 (269)
Q Consensus 112 p~~~~--~~~~-~p~R~i~~ 128 (269)
++.+ .... .|+|++|+
T Consensus 138 -~t~~~~~~~~~~~~rviG~ 156 (331)
T 1pzg_A 138 -MVKVMCEASGVPTNMICGM 156 (331)
T ss_dssp -HHHHHHHHHCCCGGGEEEC
T ss_pred -HHHHHHHhcCCChhcEEec
Confidence 2342 2222 67899888
No 52
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=97.47 E-value=0.0002 Score=63.28 Aligned_cols=108 Identities=8% Similarity=0.031 Sum_probs=78.2
Q ss_pred EecCHHHHhc-CCCCceEEeecCCCcCCCchhHHHHHHHhcCCCCcEEecCCCCCcccccccC-CCCCCCeEEEeeccCC
Q psy9059 56 YLYTYSERLM-GSNGLAMVFPLQEQIPIQTPQQMSERIYMYTYSERLMGSNGLAMVFPLQEQI-PIQTPHLIIGMHYFSP 133 (269)
Q Consensus 56 ~~~~~~~a~~-~~~~~~V~E~vpE~l~~K~k~~l~~~l~~~~~~~~iiaSnTS~l~~p~~~~~-~~~~p~R~i~~HffnP 133 (269)
...++++++. ++| +|+.|+|.. .- .+++.++.++++++++|...+++-......+. .. +++++..||...
T Consensus 51 ~~~~~~~~~~~~aD--vVilavp~~--~~--~~v~~~l~~~l~~~~iv~~~~~~~~~~~~~l~~~l--~~~~v~~~p~~~ 122 (281)
T 2g5c_A 51 GTTSIAKVEDFSPD--FVMLSSPVR--TF--REIAKKLSYILSEDATVTDQGSVKGKLVYDLENIL--GKRFVGGHPIAG 122 (281)
T ss_dssp EESCGGGGGGTCCS--EEEECSCHH--HH--HHHHHHHHHHSCTTCEEEECCSCCTHHHHHHHHHH--GGGEECEEEECC
T ss_pred ccCCHHHHhcCCCC--EEEEcCCHH--HH--HHHHHHHHhhCCCCcEEEECCCCcHHHHHHHHHhc--cccceeeccccC
Confidence 4567888887 666 999999985 23 57888888888999888764443200112221 12 224888899764
Q ss_pred CC------------CCcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEEe
Q psy9059 134 VD------------KMQLLEIITTEQTSQDTAASAVAVGLKQGKVVITVK 171 (269)
Q Consensus 134 ~~------------~~~lVEiv~~~~Ts~e~~~~~~~~~~~lGk~pv~vk 171 (269)
+. ....+.++++..++++..+.+.++++.+|+.++.+.
T Consensus 123 ~~~~gp~~a~~~l~~g~~~~~~~~~~~~~~~~~~v~~l~~~~g~~~~~~~ 172 (281)
T 2g5c_A 123 TEKSGVEYSLDNLYEGKKVILTPTKKTDKKRLKLVKRVWEDVGGVVEYMS 172 (281)
T ss_dssp CSCCSGGGCCSSTTTTCEEEECCCSSSCHHHHHHHHHHHHHTTCEEEECC
T ss_pred CccCChhhhhhHHhCCCCEEEecCCCCCHHHHHHHHHHHHHcCCEEEEcC
Confidence 32 345688999988999999999999999999988874
No 53
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=97.46 E-value=1.5e-05 Score=73.35 Aligned_cols=70 Identities=17% Similarity=0.185 Sum_probs=52.9
Q ss_pred CcCeEEecCHHHHhcCCCCceEEeec--CC------------CcCCCchhHHHHHHHhcCCCCcEE--ecCCCCCccccc
Q psy9059 51 HTGITYLYTYSERLMGSNGLAMVFPL--QE------------QIPIQTPQQMSERIYMYTYSERLM--GSNGLAMVFPLQ 114 (269)
Q Consensus 51 ~~~l~~~~~~~~a~~~~~~~~V~E~v--pE------------~l~~K~k~~l~~~l~~~~~~~~ii--aSnTS~l~~p~~ 114 (269)
..+++++.++ +|+++|| +|++++ |+ +.++| ++++++|+++| |++++ +||++.. ++
T Consensus 68 ~~~i~~t~d~-~al~~aD--~VI~avg~p~k~g~tr~dl~~~n~~i~--~~i~~~i~~~~-p~a~viv~tNP~~~---~t 138 (328)
T 2hjr_A 68 PAKIFGENNY-EYLQNSD--VVIITAGVPRKPNMTRSDLLTVNAKIV--GSVAENVGKYC-PNAFVICITNPLDA---MV 138 (328)
T ss_dssp CCCEEEESCG-GGGTTCS--EEEECCSCCCCTTCCSGGGHHHHHHHH--HHHHHHHHHHC-TTCEEEECCSSHHH---HH
T ss_pred CCEEEECCCH-HHHCCCC--EEEEcCCCCCCCCCchhhHHhhhHHHH--HHHHHHHHHHC-CCeEEEEecCchHH---HH
Confidence 4689998898 8997776 999999 77 33446 99999999998 66765 8999876 23
Q ss_pred cc-CCCC--CCCeEEEee
Q psy9059 115 EQ-IPIQ--TPHLIIGMH 129 (269)
Q Consensus 115 ~~-~~~~--~p~R~i~~H 129 (269)
.+ .... +|+|++|+-
T Consensus 139 ~~~~~~~~~~~~rviG~~ 156 (328)
T 2hjr_A 139 YYFKEKSGIPANKVCGMS 156 (328)
T ss_dssp HHHHHHHCCCGGGEEESC
T ss_pred HHHHHhcCCChhhEEEeC
Confidence 42 2222 678888873
No 54
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=97.46 E-value=7.4e-05 Score=67.61 Aligned_cols=147 Identities=11% Similarity=-0.041 Sum_probs=95.1
Q ss_pred CeEEecCHHHHhcCCCCceEEeecCCCcCCCchhHHHH--HHHhcCCCCcEEecCCCCCcccccc-c-CCC-CCCCeEEE
Q psy9059 53 GITYLYTYSERLMGSNGLAMVFPLQEQIPIQTPQQMSE--RIYMYTYSERLMGSNGLAMVFPLQE-Q-IPI-QTPHLIIG 127 (269)
Q Consensus 53 ~l~~~~~~~~a~~~~~~~~V~E~vpE~l~~K~k~~l~~--~l~~~~~~~~iiaSnTS~l~~p~~~-~-~~~-~~p~R~i~ 127 (269)
+++...|++|++.++| +|+.++|....++ . ++. .+....+...+|-+||+.. .... + ... .+.-+++.
T Consensus 52 g~~~~~~~~e~~~~aD--vVi~~vp~~~~~~--~-v~~~~~l~~~~~g~ivid~st~~~--~~~~~l~~~~~~~g~~~vd 124 (306)
T 3l6d_A 52 GAHLCESVKAALSASP--ATIFVLLDNHATH--E-VLGMPGVARALAHRTIVDYTTNAQ--DEGLALQGLVNQAGGHYVK 124 (306)
T ss_dssp TCEECSSHHHHHHHSS--EEEECCSSHHHHH--H-HHTSTTHHHHTTTCEEEECCCCCT--THHHHHHHHHHHTTCEEEE
T ss_pred CCeecCCHHHHHhcCC--EEEEEeCCHHHHH--H-HhcccchhhccCCCEEEECCCCCH--HHHHHHHHHHHHcCCeEEe
Confidence 4577889999998876 9999999876665 4 334 5666555555665555543 1222 2 111 22345665
Q ss_pred eeccCCC-C--CCcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEE--ec--cCchhHHHHH---HHHHHHHHHHHH-cC
Q psy9059 128 MHYFSPV-D--KMQLLEIITTEQTSQDTAASAVAVGLKQGKVVITV--KD--GPGFYTTRIL---STMLSEAMRILQ-EG 196 (269)
Q Consensus 128 ~HffnP~-~--~~~lVEiv~~~~Ts~e~~~~~~~~~~~lGk~pv~v--kd--~pGfI~nRll---~al~~EA~~lv~-eG 196 (269)
..-+.++ . .-.++-++.+ ++++++++..+++.+|+.++.+ .+ ..|...+-++ .+.++|++.+.+ .|
T Consensus 125 apv~g~~~~~~~~~~~i~~gg---~~~~~~~~~~ll~~lg~~~~~~~~g~~~g~g~~~k~~~~~~~~~~~Ea~~la~~~G 201 (306)
T 3l6d_A 125 GMIVAYPRNVGHRESHSIHTG---DREAFEQHRALLEGLAGHTVFLPWDEALAFATVLHAHAFAAMVTFFEAVGAGDRFG 201 (306)
T ss_dssp EEEESCGGGTTCTTCEEEEEE---CHHHHHHHHHHHHTTCSEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred cccccCcccccCCceEEEEcC---CHHHHHHHHHHHHHhcCCEEEecCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 4333221 1 1123444444 6899999999999998888888 54 4566666332 467889988875 57
Q ss_pred CCHHHHHHHHH-hc
Q psy9059 197 TSPKDLDRLTK-QF 209 (269)
Q Consensus 197 is~edID~a~~-g~ 209 (269)
++++++..++. +.
T Consensus 202 ld~~~~~~~~~~~~ 215 (306)
T 3l6d_A 202 LPVSKTARLLLETS 215 (306)
T ss_dssp CCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhh
Confidence 89999988886 53
No 55
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=97.39 E-value=0.0009 Score=60.89 Aligned_cols=139 Identities=9% Similarity=0.022 Sum_probs=93.2
Q ss_pred ec-CHHHHhcCCCCceEEeecCCCcCCCchhHHHHHHHhcCCCCcEEecCCCCCcccccc--c-CCC-CCCCeEEEeecc
Q psy9059 57 LY-TYSERLMGSNGLAMVFPLQEQIPIQTPQQMSERIYMYTYSERLMGSNGLAMVFPLQE--Q-IPI-QTPHLIIGMHYF 131 (269)
Q Consensus 57 ~~-~~~~a~~~~~~~~V~E~vpE~l~~K~k~~l~~~l~~~~~~~~iiaSnTS~l~~p~~~--~-~~~-~~p~R~i~~Hff 131 (269)
+. |++|++.++| +|+.|||.....+ ...++.+.+++++++.+.|+.- |.+. + +.+ .+.-+++..-.+
T Consensus 77 ~~~s~~e~~~~aD--vVi~avp~~~~~~----~~~~i~~~l~~~~ivv~~st~~--p~~~~~~~~~l~~~g~~~~d~pv~ 148 (317)
T 4ezb_A 77 EPLDDVAGIACAD--VVLSLVVGAATKA----VAASAAPHLSDEAVFIDLNSVG--PDTKALAAGAIATGKGSFVEGAVM 148 (317)
T ss_dssp EEESSGGGGGGCS--EEEECCCGGGHHH----HHHHHGGGCCTTCEEEECCSCC--HHHHHHHHHHHHTSSCEEEEEEEC
T ss_pred CCCCHHHHHhcCC--EEEEecCCHHHHH----HHHHHHhhcCCCCEEEECCCCC--HHHHHHHHHHHHHcCCeEEeccCC
Confidence 55 8899998766 9999999976544 4588888888888777655433 3222 2 111 222345443223
Q ss_pred CC--CCCCcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEEeccCch---------hHHHHHHHHHHHHHHHHH-cCCCH
Q psy9059 132 SP--VDKMQLLEIITTEQTSQDTAASAVAVGLKQGKVVITVKDGPGF---------YTTRILSTMLSEAMRILQ-EGTSP 199 (269)
Q Consensus 132 nP--~~~~~lVEiv~~~~Ts~e~~~~~~~~~~~lGk~pv~vkd~pGf---------I~nRll~al~~EA~~lv~-eGis~ 199 (269)
.| ...-.+..++.|+.+ +++..+++.+|+.++.+.+.+|- .......+.++|++.+.+ .|+++
T Consensus 149 g~~~a~~g~l~i~vgg~~~-----~~~~~ll~~~g~~v~~~g~~~g~a~~~Kl~~N~~~~~~~~~~~E~~~la~~~Gid~ 223 (317)
T 4ezb_A 149 ARVPPYAEKVPILVAGRRA-----VEVAERLNALGMNLEAVGETPGQASSLKMIRSVMIKGVEALLIEALSSAERAGVTE 223 (317)
T ss_dssp SCSTTTGGGSEEEEESTTH-----HHHHHHHHTTTCEEEEEESSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHH
T ss_pred CCchhhcCCEEEEEeCChH-----HHHHHHHHHhCCCeEEeCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 33 234467778887653 78889999999999999764552 233456778899998876 68877
Q ss_pred HHHHHHHHh
Q psy9059 200 KDLDRLTKQ 208 (269)
Q Consensus 200 edID~a~~g 208 (269)
+.++.+..+
T Consensus 224 ~~~~~l~~~ 232 (317)
T 4ezb_A 224 RILDSVQET 232 (317)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhc
Confidence 777776654
No 56
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=97.35 E-value=0.0001 Score=65.53 Aligned_cols=148 Identities=14% Similarity=0.052 Sum_probs=92.8
Q ss_pred CeEEecCHHHHhcCCCCceEEeecCCCcCCCchhHHHHHH---HhcCCCCcEEecCCCCCccccccc----CCCCCCCeE
Q psy9059 53 GITYLYTYSERLMGSNGLAMVFPLQEQIPIQTPQQMSERI---YMYTYSERLMGSNGLAMVFPLQEQ----IPIQTPHLI 125 (269)
Q Consensus 53 ~l~~~~~~~~a~~~~~~~~V~E~vpE~l~~K~k~~l~~~l---~~~~~~~~iiaSnTS~l~~p~~~~----~~~~~p~R~ 125 (269)
+++.+.+++|++.++| +|+.++|....++ . ++.++ .+.+++++++.+ +|++ +.... .......+.
T Consensus 43 g~~~~~~~~~~~~~~D--vvi~~vp~~~~~~--~-v~~~~~~~~~~l~~~~~vv~-~s~~--~~~~~~~~~~~~~~~g~~ 114 (296)
T 2gf2_A 43 GEQVVSSPADVAEKAD--RIITMLPTSINAI--E-AYSGANGILKKVKKGSLLID-SSTI--DPAVSKELAKEVEKMGAV 114 (296)
T ss_dssp TCEECSSHHHHHHHCS--EEEECCSSHHHHH--H-HHHSTTSGGGTCCTTCEEEE-CSCC--CHHHHHHHHHHHHHTTCE
T ss_pred CCeecCCHHHHHhcCC--EEEEeCCCHHHHH--H-HHhCchhHHhcCCCCCEEEE-CCCC--CHHHHHHHHHHHHHcCCE
Confidence 4677889999997766 9999999866555 3 44443 335678888888 7777 33221 111111222
Q ss_pred EEeeccCCC---CCCcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEEecc-Cch---hHHHHHH----HHHHHHHHHHH
Q psy9059 126 IGMHYFSPV---DKMQLLEIITTEQTSQDTAASAVAVGLKQGKVVITVKDG-PGF---YTTRILS----TMLSEAMRILQ 194 (269)
Q Consensus 126 i~~HffnP~---~~~~lVEiv~~~~Ts~e~~~~~~~~~~~lGk~pv~vkd~-pGf---I~nRll~----al~~EA~~lv~ 194 (269)
+.-++..+. ...+...++.+ .+++.++.+..+++.+|+.++.+.+. .|. ++|+.+. .+++|++.+.+
T Consensus 115 ~~~~p~~~g~~~a~~~~~~~~~~--~~~~~~~~v~~l~~~~g~~~~~~~~~g~~~~~kl~~n~~~~~~~~~~~Ea~~~~~ 192 (296)
T 2gf2_A 115 FMDAPVSGGVGAARSGNLTFMVG--GVEDEFAAAQELLGCMGSNVVYCGAVGTGQAAKICNNMLLAISMIGTAEAMNLGI 192 (296)
T ss_dssp EEECCEESHHHHHHHTCEEEEEE--SCGGGHHHHHHHHTTTEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEcCCCCChhHHhcCcEEEEeC--CCHHHHHHHHHHHHHHcCCeEEeCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222222111 00122345544 46888999999999999998887542 122 2344443 58999998765
Q ss_pred -cCCCHHHHHHHHH-hcC
Q psy9059 195 -EGTSPKDLDRLTK-QFG 210 (269)
Q Consensus 195 -eGis~edID~a~~-g~G 210 (269)
.|+++++++.++. +.|
T Consensus 193 ~~G~~~~~~~~~~~~~~~ 210 (296)
T 2gf2_A 193 RLGLDPKLLAKILNMSSG 210 (296)
T ss_dssp HTTCCHHHHHHHHHTSTT
T ss_pred HcCCCHHHHHHHHHhCcc
Confidence 6889999999886 554
No 57
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=97.34 E-value=0.0004 Score=62.50 Aligned_cols=104 Identities=12% Similarity=0.117 Sum_probs=75.1
Q ss_pred CHHHHhcCCCCceEEeecCCCcCCCchhHHHHHHHhcCCCCcEEecCCCCCcccccccCCCCCCCeEEEeeccCCCC---
Q psy9059 59 TYSERLMGSNGLAMVFPLQEQIPIQTPQQMSERIYMYTYSERLMGSNGLAMVFPLQEQIPIQTPHLIIGMHYFSPVD--- 135 (269)
Q Consensus 59 ~~~~a~~~~~~~~V~E~vpE~l~~K~k~~l~~~l~~~~~~~~iiaSnTS~l~~p~~~~~~~~~p~R~i~~HffnP~~--- 135 (269)
+..+++.++| +|+.|||... . .++++++.++++++++|...+|.-...+..+... .+.|+++.||..++.
T Consensus 58 ~~~~~~~~aD--vVilavp~~~--~--~~vl~~l~~~l~~~~iv~~~~svk~~~~~~~~~~-~~~~~v~~hP~~g~~~~~ 130 (298)
T 2pv7_A 58 VAESILANAD--VVIVSVPINL--T--LETIERLKPYLTENMLLADLTSVKREPLAKMLEV-HTGAVLGLHPMFGADIAS 130 (298)
T ss_dssp GHHHHHTTCS--EEEECSCGGG--H--HHHHHHHGGGCCTTSEEEECCSCCHHHHHHHHHH-CSSEEEEEEECSCTTCSC
T ss_pred CHHHHhcCCC--EEEEeCCHHH--H--HHHHHHHHhhcCCCcEEEECCCCCcHHHHHHHHh-cCCCEEeeCCCCCCCchh
Confidence 6888887766 9999999864 6 8999999999999998886655421022222221 257999999965432
Q ss_pred -CCcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEEe
Q psy9059 136 -KMQLLEIITTEQTSQDTAASAVAVGLKQGKVVITVK 171 (269)
Q Consensus 136 -~~~lVEiv~~~~Ts~e~~~~~~~~~~~lGk~pv~vk 171 (269)
.-..+-++++. +++..+.+.++++.+|..++.+.
T Consensus 131 ~~g~~~~l~~~~--~~~~~~~v~~l~~~~G~~~~~~~ 165 (298)
T 2pv7_A 131 MAKQVVVRCDGR--FPERYEWLLEQIQIWGAKIYQTN 165 (298)
T ss_dssp CTTCEEEEEEEE--CGGGTHHHHHHHHHTTCEEEECC
T ss_pred hcCCeEEEecCC--CHHHHHHHHHHHHHcCCEEEECC
Confidence 12345566654 77888999999999999988874
No 58
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=97.29 E-value=6.1e-05 Score=69.21 Aligned_cols=71 Identities=13% Similarity=0.201 Sum_probs=53.0
Q ss_pred CcCeEEecCHHHHhcCCCCceEEeec--CCCcCC---------------CchhHHHHHHHhcCCCCcEE--ecCCCCCcc
Q psy9059 51 HTGITYLYTYSERLMGSNGLAMVFPL--QEQIPI---------------QTPQQMSERIYMYTYSERLM--GSNGLAMVF 111 (269)
Q Consensus 51 ~~~l~~~~~~~~a~~~~~~~~V~E~v--pE~l~~---------------K~k~~l~~~l~~~~~~~~ii--aSnTS~l~~ 111 (269)
..+++++.++ +|++||| +|++++ |++... +.|++++++|++++ |++++ +||+++.
T Consensus 58 ~~~i~~t~d~-~al~~aD--~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~tNP~~~-- 131 (322)
T 1t2d_A 58 NCKVSGSNTY-DDLAGAD--VVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNC-PNAFIIVVTNPVDV-- 131 (322)
T ss_dssp CCCEEEECCG-GGGTTCS--EEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHC-TTSEEEECSSSHHH--
T ss_pred CcEEEECCCH-HHhCCCC--EEEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecCChHH--
Confidence 4688988899 8998777 999999 876542 23499999999998 67755 8999986
Q ss_pred ccccc-CCCC--CCCeEEEe
Q psy9059 112 PLQEQ-IPIQ--TPHLIIGM 128 (269)
Q Consensus 112 p~~~~-~~~~--~p~R~i~~ 128 (269)
++.+ .... +|+|++|+
T Consensus 132 -~t~~~~~~~g~~~~rviG~ 150 (322)
T 1t2d_A 132 -MVQLLHQHSGVPKNKIIGL 150 (322)
T ss_dssp -HHHHHHHHHCCCGGGEEEC
T ss_pred -HHHHHHHhcCCChHHEEec
Confidence 2342 2222 57888877
No 59
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=97.26 E-value=0.00099 Score=58.99 Aligned_cols=133 Identities=11% Similarity=-0.009 Sum_probs=86.6
Q ss_pred CCceEEeecCCCcCCCchhHHHHHHHhcCCCCcEEecCCCCCcccccc-cCCCCCCCeEEEe-eccCCCCCCc-------
Q psy9059 68 NGLAMVFPLQEQIPIQTPQQMSERIYMYTYSERLMGSNGLAMVFPLQE-QIPIQTPHLIIGM-HYFSPVDKMQ------- 138 (269)
Q Consensus 68 ~~~~V~E~vpE~l~~K~k~~l~~~l~~~~~~~~iiaSnTS~l~~p~~~-~~~~~~p~R~i~~-HffnP~~~~~------- 138 (269)
++|+|+.|+|.. .- .+++++|.++++++++|.+.++++ +..+ +...-.+.|++.. +++..+...|
T Consensus 74 ~~d~vi~~v~~~--~~--~~v~~~l~~~l~~~~~iv~~~~g~--~~~~~l~~~~~~~~vi~g~~~~~~~~~~p~~~~~~~ 147 (316)
T 2ew2_A 74 QVDLIIALTKAQ--QL--DAMFKAIQPMITEKTYVLCLLNGL--GHEDVLEKYVPKENILVGITMWTAGLEGPGRVKLLG 147 (316)
T ss_dssp CCSEEEECSCHH--HH--HHHHHHHGGGCCTTCEEEECCSSS--CTHHHHTTTSCGGGEEEEEECCCCEEEETTEEEECS
T ss_pred CCCEEEEEeccc--cH--HHHHHHHHHhcCCCCEEEEecCCC--CcHHHHHHHcCCccEEEEEeeeeeEEcCCCEEEEec
Confidence 355999999975 34 688899999999999999988887 4423 3322223477743 3322221111
Q ss_pred --EEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEEecc------------------------CchhH-----HHHHHHHHH
Q psy9059 139 --LLEIITTEQTSQDTAASAVAVGLKQGKVVITVKDG------------------------PGFYT-----TRILSTMLS 187 (269)
Q Consensus 139 --lVEiv~~~~Ts~e~~~~~~~~~~~lGk~pv~vkd~------------------------pGfI~-----nRll~al~~ 187 (269)
.+.++....++++..+.+.++++..|..+....|. +|++. ..+...+++
T Consensus 148 ~g~~~i~~~~~~~~~~~~~~~~ll~~~g~~~~~~~d~~~~~~~Kl~~N~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~ 227 (316)
T 2ew2_A 148 DGEIELENIDPSGKKFALEVVDVFQKAGLNPSYSSNVRYSIWRKACVNGTLNGLCTILDCNIAEFGALPVSESLVKTLIS 227 (316)
T ss_dssp CCCEEEEESSGGGHHHHHHHHHHHHHTTCCEEECTTHHHHHHHHHHHHTTHHHHHHHHTCCHHHHHTSTTHHHHHHHHHH
T ss_pred CCcEEEeecCCCccHHHHHHHHHHHhCCCCcEEchhHHHHHHHHHHHhhhHHHHHHHhCCcHHHHHhCHHHHHHHHHHHH
Confidence 12344445567899999999999999877666543 11211 266788889
Q ss_pred HHHHHHH-cCC--CHHHHHHHH
Q psy9059 188 EAMRILQ-EGT--SPKDLDRLT 206 (269)
Q Consensus 188 EA~~lv~-eGi--s~edID~a~ 206 (269)
|++.+.+ .|+ +.+++...+
T Consensus 228 E~~~la~~~G~~~~~~~~~~~~ 249 (316)
T 2ew2_A 228 EFAAVAEKEAIYLDQAEVYTHI 249 (316)
T ss_dssp HHHHHHHHTTCCCCHHHHHHHH
T ss_pred HHHHHHHHcCCCCChHHHHHHH
Confidence 9988875 788 345564444
No 60
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=97.09 E-value=0.003 Score=60.85 Aligned_cols=151 Identities=7% Similarity=0.021 Sum_probs=96.1
Q ss_pred cCeEEecCHHHHhcCCCCceEEeecCCCc-----------CCCchhHHHHHHHhcCCCCcEEecCCCCCcccccc-cC--
Q psy9059 52 TGITYLYTYSERLMGSNGLAMVFPLQEQI-----------PIQTPQQMSERIYMYTYSERLMGSNGLAMVFPLQE-QI-- 117 (269)
Q Consensus 52 ~~l~~~~~~~~a~~~~~~~~V~E~vpE~l-----------~~K~k~~l~~~l~~~~~~~~iiaSnTS~l~~p~~~-~~-- 117 (269)
+++++++++++++.++| +|+.|||... |++.-.++.++|.++++++++|.. +|+.+.-.++ +.
T Consensus 72 ~~l~~t~~~~~~~~~aD--vvii~Vptp~~~~g~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~-~STv~~gt~~~l~~~ 148 (481)
T 2o3j_A 72 RNLFFSSDIPKAIAEAD--LIFISVNTPTKMYGRGKGMAPDLKYVESVSRTIAQYAGGPKIVVE-KSTVPVKAAESIGCI 148 (481)
T ss_dssp TTEEEESCHHHHHHHCS--EEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHHCCSCEEEEE-CSCCCTTHHHHHHHH
T ss_pred CCEEEECCHHHHhhcCC--EEEEecCCccccccccccCCCcHHHHHHHHHHHHHhCCCCCEEEE-CCCCCCCHHHHHHHH
Confidence 57999999999998766 9999998743 443337888999999998887763 3333111122 11
Q ss_pred --C-CC--CCCeEEEeeccCCCCCCcEE---------EEeCCCCCC---HHHHHHHHHHHHhCCc-EEEEEec-----cC
Q psy9059 118 --P-IQ--TPHLIIGMHYFSPVDKMQLL---------EIITTEQTS---QDTAASAVAVGLKQGK-VVITVKD-----GP 174 (269)
Q Consensus 118 --~-~~--~p~R~i~~HffnP~~~~~lV---------Eiv~~~~Ts---~e~~~~~~~~~~~lGk-~pv~vkd-----~p 174 (269)
. .. ...++.+ .++|....+-. -|+-|..++ +++.+.+.++++.+++ .++.+.+ ..
T Consensus 149 l~~~~~~~~~~d~~v--~~~Pe~~~~G~a~~~~~~~~~iviG~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~d~~~ae~~ 226 (481)
T 2o3j_A 149 LREAQKNNENLKFQV--LSNPEFLAEGTAMKDLANPDRVLIGGESSPEGLQAVAELVRIYENWVPRNRIITTNTWSSELS 226 (481)
T ss_dssp HHHHTC----CCEEE--EECCCCCCTTCHHHHHHSCSCEEEEECSSHHHHHHHHHHHHHHHTTSCGGGEEEEEHHHHHHH
T ss_pred HHHhhCcCcCCceEE--EeCcccccccchhhcccCCCEEEEEecCchhhHHHHHHHHHHHHhhcCCCeEEecCHHHHHHH
Confidence 1 11 0112212 23454433221 344333332 3678889999999986 6666543 33
Q ss_pred chhHHH---HHHHHHHHHHHHHH-cCCCHHHHHHHHH
Q psy9059 175 GFYTTR---ILSTMLSEAMRILQ-EGTSPKDLDRLTK 207 (269)
Q Consensus 175 GfI~nR---ll~al~~EA~~lv~-eGis~edID~a~~ 207 (269)
.++.|. +..+++||+..+.+ .|++++++..++.
T Consensus 227 Kl~~N~~~a~~ia~~nE~~~la~~~Gid~~~v~~~~~ 263 (481)
T 2o3j_A 227 KLVANAFLAQRISSINSISAVCEATGAEISEVAHAVG 263 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHc
Confidence 466676 45788999998876 5889999988875
No 61
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=96.93 E-value=0.0025 Score=60.98 Aligned_cols=150 Identities=5% Similarity=-0.086 Sum_probs=98.1
Q ss_pred CcCeEEecCHHHHhcCCCCceEEeecCCCcC------CCchhHHHHHHHhcCCCCcEEecCCCCCcccc-cc-c-CCCC-
Q psy9059 51 HTGITYLYTYSERLMGSNGLAMVFPLQEQIP------IQTPQQMSERIYMYTYSERLMGSNGLAMVFPL-QE-Q-IPIQ- 120 (269)
Q Consensus 51 ~~~l~~~~~~~~a~~~~~~~~V~E~vpE~l~------~K~k~~l~~~l~~~~~~~~iiaSnTS~l~~p~-~~-~-~~~~- 120 (269)
.++++++++++|++.++| +|+.|||...+ ++.-++++++|.+++++++++...| +.+ |- ++ + ..+.
T Consensus 63 ~~~l~~t~d~~ea~~~aD--vViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~iVV~~S-Tv~-pgt~~~l~~~l~~ 138 (450)
T 3gg2_A 63 AGRLRFGTEIEQAVPEAD--IIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVTKS-TVP-VGSYRLIRKAIQE 138 (450)
T ss_dssp TTSEEEESCHHHHGGGCS--EEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECS-CCC-TTHHHHHHHHHHH
T ss_pred cCcEEEECCHHHHHhcCC--EEEEEcCCCcccCCCcChHHHHHHHHHHHhhCCCCCEEEEee-eCC-CcchHHHHHHHHH
Confidence 478999999999998877 99999988743 3333889999999999888776543 341 21 11 1 1110
Q ss_pred -CC-----CeEEEeeccCCCCCCcEEE---------EeCCCCCCHHHHHHHHHHHHhCCc--EEEEEecc-----CchhH
Q psy9059 121 -TP-----HLIIGMHYFSPVDKMQLLE---------IITTEQTSQDTAASAVAVGLKQGK--VVITVKDG-----PGFYT 178 (269)
Q Consensus 121 -~p-----~R~i~~HffnP~~~~~lVE---------iv~~~~Ts~e~~~~~~~~~~~lGk--~pv~vkd~-----pGfI~ 178 (269)
.+ ..+-++ ++|....+-.. |+-|. .++++.+.+..+++.+++ .++.+.+. -.++.
T Consensus 139 ~~~~~~~~~d~~v~--~~Pe~a~eG~~~~~~~~p~~ivvG~-~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~aE~~Kl~~ 215 (450)
T 3gg2_A 139 ELDKREVLIDFDIA--SNPEFLKEGNAIDDFMKPDRVVVGV-DSDRARELITSLYKPMLLNNFRVLFMDIASAEMTKYAA 215 (450)
T ss_dssp HHHHTTCCCCEEEE--ECCCCCCTTSHHHHHHSCSCEEEEE-SSHHHHHHHHHHHTTTCCSCCCEEEECHHHHHHHHHHH
T ss_pred hccccCcCcceeEE--echhhhcccchhhhccCCCEEEEEc-CCHHHHHHHHHHHHHHhcCCCeEEecCHHHHHHHHHHH
Confidence 01 122222 35655444222 34332 368899999999999886 36665443 23455
Q ss_pred HH---HHHHHHHHHHHHHH-cCCCHHHHHHHHH
Q psy9059 179 TR---ILSTMLSEAMRILQ-EGTSPKDLDRLTK 207 (269)
Q Consensus 179 nR---ll~al~~EA~~lv~-eGis~edID~a~~ 207 (269)
|- +..+.+||+..+.+ .|++++++-.++.
T Consensus 216 N~~~a~~ia~~nE~~~l~~~~Gid~~~v~~~~~ 248 (450)
T 3gg2_A 216 NAMLATRISFMNDVANLCERVGADVSMVRLGIG 248 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHc
Confidence 55 34677899998876 6889999888874
No 62
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=96.81 E-value=0.00017 Score=65.78 Aligned_cols=67 Identities=10% Similarity=0.223 Sum_probs=52.5
Q ss_pred CeEEecCHHHHhcCCCCceEEeec-------------CCCcCCCchhHHHHHHHhcCCCCcEE--ecCCCCCccccccc-
Q psy9059 53 GITYLYTYSERLMGSNGLAMVFPL-------------QEQIPIQTPQQMSERIYMYTYSERLM--GSNGLAMVFPLQEQ- 116 (269)
Q Consensus 53 ~l~~~~~~~~a~~~~~~~~V~E~v-------------pE~l~~K~k~~l~~~l~~~~~~~~ii--aSnTS~l~~p~~~~- 116 (269)
+++.+.++ ++++|+| +|++++ .|+.++| ++++++|+++| |+++| +||++.. ++..
T Consensus 65 ~i~~t~d~-~~l~~aD--~Vi~aag~~~pG~tR~dl~~~n~~i~--~~i~~~i~~~~-p~a~iiv~sNP~~~---~t~~~ 135 (303)
T 2i6t_A 65 NVEISKDL-SASAHSK--VVIFTVNSLGSSQSYLDVVQSNVDMF--RALVPALGHYS-QHSVLLVASQPVEI---MTYVT 135 (303)
T ss_dssp TEEEESCG-GGGTTCS--EEEECCCC----CCHHHHHHHHHHHH--HHHHHHHHHHT-TTCEEEECSSSHHH---HHHHH
T ss_pred CeEEeCCH-HHHCCCC--EEEEcCCCCCCCCCHHHHHHHHHHHH--HHHHHHHHHhC-CCeEEEEcCChHHH---HHHHH
Confidence 67777888 8887766 999998 8999999 99999999998 77776 9998865 3332
Q ss_pred -CCCC-CCCeEEEe
Q psy9059 117 -IPIQ-TPHLIIGM 128 (269)
Q Consensus 117 -~~~~-~p~R~i~~ 128 (269)
.... .|.|++|+
T Consensus 136 ~~~~~~p~~rviG~ 149 (303)
T 2i6t_A 136 WKLSTFPANRVIGI 149 (303)
T ss_dssp HHHHCCCGGGEEEC
T ss_pred HHhcCCCHHHeeCC
Confidence 2122 26788888
No 63
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=96.78 E-value=0.00073 Score=65.64 Aligned_cols=148 Identities=11% Similarity=0.109 Sum_probs=96.5
Q ss_pred cCeEEecCHHHHhcC-CCCceEEeecCCCcCCCchhHHHHHHHhcCCCCcEEecCCCCCccccccc-CCCC-CCCeEEEe
Q psy9059 52 TGITYLYTYSERLMG-SNGLAMVFPLQEQIPIQTPQQMSERIYMYTYSERLMGSNGLAMVFPLQEQ-IPIQ-TPHLIIGM 128 (269)
Q Consensus 52 ~~l~~~~~~~~a~~~-~~~~~V~E~vpE~l~~K~k~~l~~~l~~~~~~~~iiaSnTS~l~~p~~~~-~~~~-~p~R~i~~ 128 (269)
.+++.+.|++|++.+ ..+|+|+.+||....++ +++++|.++++++.||.+.+++....+..+ +.+. ..-+++.+
T Consensus 57 ~gi~~~~s~~e~v~~l~~aDvVil~Vp~~~~v~---~vl~~l~~~l~~g~iIId~s~~~~~~~~~l~~~l~~~g~~~v~~ 133 (497)
T 2p4q_A 57 KSIIGATSIEDFISKLKRPRKVMLLVKAGAPVD---ALINQIVPLLEKGDIIIDGGNSHFPDSNRRYEELKKKGILFVGS 133 (497)
T ss_dssp SSEECCSSHHHHHHTSCSSCEEEECCCSSHHHH---HHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCeEEeCCHHHHHhcCCCCCEEEEEcCChHHHH---HHHHHHHHhCCCCCEEEECCCCChhHHHHHHHHHHHcCCceeCC
Confidence 357888999999976 12449999999976665 566889999988777775555441111122 1121 12345555
Q ss_pred eccCCCC---CCcEEEEeCCCCCCHHHHHHHHHHHHhCCcE------EEEE-eccCch----hHHHHH---HHHHHHHHH
Q psy9059 129 HYFSPVD---KMQLLEIITTEQTSQDTAASAVAVGLKQGKV------VITV-KDGPGF----YTTRIL---STMLSEAMR 191 (269)
Q Consensus 129 HffnP~~---~~~lVEiv~~~~Ts~e~~~~~~~~~~~lGk~------pv~v-kd~pGf----I~nRll---~al~~EA~~ 191 (269)
...+.+. .-+ -++.+. +++..+++..+++.+|+. +..+ ....|. +-|.+. ...++|++.
T Consensus 134 pVsgg~~~a~~G~--~im~gg--~~e~~~~v~~ll~~~g~~~dGe~~v~~vg~~G~g~~~Kl~~N~~~~~~~~~laEa~~ 209 (497)
T 2p4q_A 134 GVSGGEEGARYGP--SLMPGG--SEEAWPHIKNIFQSISAKSDGEPCCEWVGPAGAGHYVKMVHNGIEYGDMQLICEAYD 209 (497)
T ss_dssp EEESHHHHHHHCC--EEEEEE--CGGGHHHHHHHHHHHSCEETTEESCCCCEETTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcccChhHhhcCC--eEEecC--CHHHHHHHHHHHHHhcCccCCCCceEEECCccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333221 011 144442 678899999999999987 5555 344444 356665 688899999
Q ss_pred HHHc--CCCHHHHHHHH
Q psy9059 192 ILQE--GTSPKDLDRLT 206 (269)
Q Consensus 192 lv~e--Gis~edID~a~ 206 (269)
+.+. |++++++..++
T Consensus 210 l~~~~lGl~~~~~~~~~ 226 (497)
T 2p4q_A 210 IMKRLGGFTDKEISDVF 226 (497)
T ss_dssp HHHHTTCCCHHHHHHHH
T ss_pred HHHHccCCCHHHHHHHH
Confidence 9876 88999998776
No 64
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=96.70 E-value=0.017 Score=53.45 Aligned_cols=139 Identities=10% Similarity=0.060 Sum_probs=91.8
Q ss_pred cCeEEecCHHHHhcCCCCceEEeecCCCcCCCchhHHHHHHHhcCCCCcEEecCCCCCccccc----c-c-CCCCCCCeE
Q psy9059 52 TGITYLYTYSERLMGSNGLAMVFPLQEQIPIQTPQQMSERIYMYTYSERLMGSNGLAMVFPLQ----E-Q-IPIQTPHLI 125 (269)
Q Consensus 52 ~~l~~~~~~~~a~~~~~~~~V~E~vpE~l~~K~k~~l~~~l~~~~~~~~iiaSnTS~l~~p~~----~-~-~~~~~p~R~ 125 (269)
.+++++++++|++.++| +|+.+||.. .. ++++++|.++++++++|.|.+.++. +.+ + + +... ..++
T Consensus 85 ~~i~~t~d~~ea~~~aD--vVilaVp~~--~~--~~vl~~i~~~l~~~~ivvs~~kGi~-~~t~~~se~i~~~l~-~~~~ 156 (356)
T 3k96_A 85 ETLKAYCDLKASLEGVT--DILIVVPSF--AF--HEVITRMKPLIDAKTRIAWGTKGLA-KGSRLLHEVVATELG-QVPM 156 (356)
T ss_dssp TTEEEESCHHHHHTTCC--EEEECCCHH--HH--HHHHHHHGGGCCTTCEEEECCCSCB-TTTBCHHHHHHHHHC-SCCE
T ss_pred CCeEEECCHHHHHhcCC--EEEECCCHH--HH--HHHHHHHHHhcCCCCEEEEEeCCCC-cCccCHHHHHHHHcC-CCCE
Confidence 47899999999998776 999999985 45 8999999999999999999999883 221 1 1 1111 1222
Q ss_pred EEeeccCCCCC------CcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEEeccCc----------------------hh
Q psy9059 126 IGMHYFSPVDK------MQLLEIITTEQTSQDTAASAVAVGLKQGKVVITVKDGPG----------------------FY 177 (269)
Q Consensus 126 i~~HffnP~~~------~~lVEiv~~~~Ts~e~~~~~~~~~~~lGk~pv~vkd~pG----------------------fI 177 (269)
.++ ..|... .|-.=++.+ .+++..+.+.+++...+..++...|..| +-
T Consensus 157 ~vl--sgP~~a~ev~~g~pt~~via~--~~~~~~~~v~~lf~~~~~rv~~~~Di~g~e~~galkNviaia~G~~~gl~~g 232 (356)
T 3k96_A 157 AVI--SGPSLATEVAANLPTAVSLAS--NNSQFSKDLIERLHGQRFRVYKNDDMIGVELCGSVKNILAIATGISDGLKLG 232 (356)
T ss_dssp EEE--ESSCCHHHHHTTCCEEEEEEE--SCHHHHHHHHHHHCCSSEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred EEE--ECccHHHHHHcCCCeEEEEec--CCHHHHHHHHHHhCCCCeeEEEeCCHHHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 222 234321 222112222 4788899999999988988877776544 11
Q ss_pred HH---HHHHHHHHHHHHHHH-cCCCHHHH
Q psy9059 178 TT---RILSTMLSEAMRILQ-EGTSPKDL 202 (269)
Q Consensus 178 ~n---Rll~al~~EA~~lv~-eGis~edI 202 (269)
-| .+....++|+.++.+ .|++++.+
T Consensus 233 ~N~~aal~~~~l~E~~~l~~a~G~~~~t~ 261 (356)
T 3k96_A 233 SNARAALITRGLTEMGRLVSVFGGKQETL 261 (356)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHhCCChHhh
Confidence 11 334556678877754 67776644
No 65
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=96.63 E-value=0.0028 Score=59.01 Aligned_cols=147 Identities=9% Similarity=0.042 Sum_probs=95.4
Q ss_pred CeEEecCHHHHhcCC-CCceEEeecCCCcCCCchhHHHHHHHhcCCCCcEEecCCCCCcccccc--c-CCC-CCCCeEEE
Q psy9059 53 GITYLYTYSERLMGS-NGLAMVFPLQEQIPIQTPQQMSERIYMYTYSERLMGSNGLAMVFPLQE--Q-IPI-QTPHLIIG 127 (269)
Q Consensus 53 ~l~~~~~~~~a~~~~-~~~~V~E~vpE~l~~K~k~~l~~~l~~~~~~~~iiaSnTS~l~~p~~~--~-~~~-~~p~R~i~ 127 (269)
+++.+.|++|++.++ .+|+|+.+||.. .- .+++.+|.+.+++++||.+.|++. |.+. + ..+ .+.-+++.
T Consensus 65 g~~~~~s~~e~~~~a~~~DvVi~~vp~~--~v--~~vl~~l~~~l~~g~iiId~st~~--~~~~~~~~~~l~~~g~~~vd 138 (358)
T 4e21_A 65 GIAGARSIEEFCAKLVKPRVVWLMVPAA--VV--DSMLQRMTPLLAANDIVIDGGNSH--YQDDIRRADQMRAQGITYVD 138 (358)
T ss_dssp TCBCCSSHHHHHHHSCSSCEEEECSCGG--GH--HHHHHHHGGGCCTTCEEEECSSCC--HHHHHHHHHHHHTTTCEEEE
T ss_pred CCEEeCCHHHHHhcCCCCCEEEEeCCHH--HH--HHHHHHHHhhCCCCCEEEeCCCCC--hHHHHHHHHHHHHCCCEEEe
Confidence 567788999999877 124999999998 44 678899999999888888777665 3222 2 112 22234444
Q ss_pred eeccCCCCC---CcEEEEeCCCCCCHHHHHHHHHHHHhCC--------------------cEEEEEe-ccCchhHHHHH-
Q psy9059 128 MHYFSPVDK---MQLLEIITTEQTSQDTAASAVAVGLKQG--------------------KVVITVK-DGPGFYTTRIL- 182 (269)
Q Consensus 128 ~HffnP~~~---~~lVEiv~~~~Ts~e~~~~~~~~~~~lG--------------------k~pv~vk-d~pGfI~nRll- 182 (269)
.--+.++.- -+ =++.| .++++++++..+++.+| +.++.+. ...|..+..+.
T Consensus 139 apVsGg~~~a~~G~--~im~G--G~~~a~~~~~~ll~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~G~~G~g~~~Kl~~n 214 (358)
T 4e21_A 139 VGTSGGIFGLERGY--CLMIG--GEKQAVERLDPVFRTLAPGIGAAPRTPGREKREGTAELGYLHCGPSGAGHFVKMVHN 214 (358)
T ss_dssp EEEECGGGHHHHCC--EEEEE--SCHHHHHHTHHHHHHHSCCGGGSCCCTTGGGCCSSGGGTEEEEESTTHHHHHHHHHH
T ss_pred CCCCCCHHHHhcCC--eeeec--CCHHHHHHHHHHHHHhccccccCcccccccccccccccceEEECCccHHHHHHHHHH
Confidence 322211110 01 13333 36899999999999998 5677774 34565554443
Q ss_pred ------HHHHHHHHHHHHc-------------------------CCCHHHHHHHHH-hc
Q psy9059 183 ------STMLSEAMRILQE-------------------------GTSPKDLDRLTK-QF 209 (269)
Q Consensus 183 ------~al~~EA~~lv~e-------------------------Gis~edID~a~~-g~ 209 (269)
...++|++.+.+. |++.++|=.+|+ |.
T Consensus 215 ~l~~~~i~~~aE~~~la~~a~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~~~~~~g~ 273 (358)
T 4e21_A 215 GIEYGLMAAYAEGLNILHHANAGKEGQGADAETAPLRNPDFYRYDLDLADITEVWRRGS 273 (358)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCC--------------CGGGCCCCCCHHHHHHHHTTTS
T ss_pred HHHHHHHHHHHHHHHHHHhcccccccccccccccccccchhcccCCCHHHHHHHHhCcc
Confidence 3456888888876 457777777776 53
No 66
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=96.60 E-value=0.0061 Score=59.01 Aligned_cols=151 Identities=9% Similarity=-0.038 Sum_probs=94.0
Q ss_pred CcCeEEecCHHHHhcCCCCceEEeecCCCc--------CCCchhHHHHHHHhcCCCCcEEecCCCCCcccccc-cC----
Q psy9059 51 HTGITYLYTYSERLMGSNGLAMVFPLQEQI--------PIQTPQQMSERIYMYTYSERLMGSNGLAMVFPLQE-QI---- 117 (269)
Q Consensus 51 ~~~l~~~~~~~~a~~~~~~~~V~E~vpE~l--------~~K~k~~l~~~l~~~~~~~~iiaSnTS~l~~p~~~-~~---- 117 (269)
.++++++++ .+++.++| +|+.|||+.. |++.-....+.|.+++++++++. +.||.+.-.++ +.
T Consensus 87 ~g~l~~ttd-~ea~~~aD--vViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV-~~STv~pgtt~~v~~~il 162 (478)
T 3g79_A 87 AGKFECTPD-FSRISELD--AVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKPGMLVV-LESTITPGTTEGMAKQIL 162 (478)
T ss_dssp TTCEEEESC-GGGGGGCS--EEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCCTTCEEE-ECSCCCTTTTTTHHHHHH
T ss_pred cCCeEEeCc-HHHHhcCC--EEEEecCCchhccCCccccHHHHHHHHHHHHhhcCCCcEEE-EeCCCChHHHHHHHHHHH
Confidence 488999999 78997766 9999999975 34322456678888888887764 55565211111 11
Q ss_pred ----CCCCCCeEEEeeccCCCCCCcEE---------EEeCCCCCCHHHHHHHHHHHHhC-CcEEEEEeccC-----chhH
Q psy9059 118 ----PIQTPHLIIGMHYFSPVDKMQLL---------EIITTEQTSQDTAASAVAVGLKQ-GKVVITVKDGP-----GFYT 178 (269)
Q Consensus 118 ----~~~~p~R~i~~HffnP~~~~~lV---------Eiv~~~~Ts~e~~~~~~~~~~~l-Gk~pv~vkd~p-----GfI~ 178 (269)
+.....++-.+ ++|....+-- =||.| .+++..+++..+++.+ ++.++.+.+.. ..+.
T Consensus 163 e~~~g~~~~~d~~v~--~~Pe~~~~G~a~~~~~~~~~Iv~G--~~~~~~~~~~~ly~~~~~~~~~~~~~~~~aE~~Kl~~ 238 (478)
T 3g79_A 163 EEESGLKAGEDFALA--HAPERVMVGRLLKNIREHDRIVGG--IDEASTKRAVELYSPVLTVGQVIPMSATAAEVTKTAE 238 (478)
T ss_dssp HHHHCCCBTTTBEEE--ECCCCCCTTSHHHHHHHSCEEEEE--SSHHHHHHHHHHHGGGCSSCCEEEEEHHHHHHHHHHH
T ss_pred HHhcCCCcCCceeEE--eCCccCCccchhhhhcCCcEEEEe--CCHHHHHHHHHHHhhhccCCeEEeCCHHHHHHHHHHH
Confidence 11111222222 3565443300 14444 3577889999999998 88887775421 1233
Q ss_pred HHH---HHHHHHHHHHHHH-cCCCHHHHHHHHH-hc
Q psy9059 179 TRI---LSTMLSEAMRILQ-EGTSPKDLDRLTK-QF 209 (269)
Q Consensus 179 nRl---l~al~~EA~~lv~-eGis~edID~a~~-g~ 209 (269)
|-+ ..+++||+..+.+ -|++++++=.++. ..
T Consensus 239 N~~~a~~Ia~~nE~~~l~e~~GiD~~~v~~~~~~~~ 274 (478)
T 3g79_A 239 NTFRDLQIAAINQLALYCEAMGINVYDVRTGVDSLK 274 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHCCCc
Confidence 333 2567899998876 6888888777764 44
No 67
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=96.47 E-value=0.0011 Score=56.80 Aligned_cols=106 Identities=5% Similarity=0.038 Sum_probs=68.8
Q ss_pred CeEEecCHHHHhcCCCCceEEeecCCCcCCCchhHHHHHHHhcCCCCcEEecCCCCCccccccc-----------CCCCC
Q psy9059 53 GITYLYTYSERLMGSNGLAMVFPLQEQIPIQTPQQMSERIYMYTYSERLMGSNGLAMVFPLQEQ-----------IPIQT 121 (269)
Q Consensus 53 ~l~~~~~~~~a~~~~~~~~V~E~vpE~l~~K~k~~l~~~l~~~~~~~~iiaSnTS~l~~p~~~~-----------~~~~~ 121 (269)
++++. ++.+++.++| +|+.++|.. .. +++++ +.... +++++.+.+++. +.+.+ +...
T Consensus 71 g~~~~-~~~~~~~~~D--vVi~av~~~--~~--~~v~~-l~~~~-~~~~vv~~s~g~--~~~~l~~~~~~~~~l~~~l~- 138 (215)
T 2vns_A 71 AAQVT-FQEEAVSSPE--VIFVAVFRE--HY--SSLCS-LSDQL-AGKILVDVSNPT--EQEHLQHRESNAEYLASLFP- 138 (215)
T ss_dssp TSEEE-EHHHHTTSCS--EEEECSCGG--GS--GGGGG-GHHHH-TTCEEEECCCCC--HHHHHHCSSCHHHHHHHHCT-
T ss_pred CCcee-cHHHHHhCCC--EEEECCChH--HH--HHHHH-HHHhc-CCCEEEEeCCCc--ccccccccccHHHHHHHHCC-
Confidence 34555 8889987666 999999964 34 56665 76666 788999988887 43211 1122
Q ss_pred CCeEEEeeccCCCCCCcEEEEeCCCCC-------CHHHHHHHHHHHHhCCcEEEEEec
Q psy9059 122 PHLIIGMHYFSPVDKMQLLEIITTEQT-------SQDTAASAVAVGLKQGKVVITVKD 172 (269)
Q Consensus 122 p~R~i~~HffnP~~~~~lVEiv~~~~T-------s~e~~~~~~~~~~~lGk~pv~vkd 172 (269)
..+++. .+|+....++.+-+....+ +++..+.+.++++.+|+.++.+.+
T Consensus 139 ~~~vv~--~~n~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~v~~ll~~~G~~~~~~g~ 194 (215)
T 2vns_A 139 TCTVVK--AFNVISAWTLQAGPRDGNRQVPICGDQPEAKRAVSEMALAMGFMPVDMGS 194 (215)
T ss_dssp TSEEEE--ECTTBCHHHHHTCSCSSCCEEEEEESCHHHHHHHHHHHHHTTCEEEECCS
T ss_pred CCeEEe--ccccccHhHhcccccCCceeEEEecCCHHHHHHHHHHHHHcCCceEeecc
Confidence 235543 3465443332221112223 899999999999999999998853
No 68
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=96.32 E-value=0.00011 Score=67.21 Aligned_cols=107 Identities=15% Similarity=0.143 Sum_probs=73.1
Q ss_pred cCeEEecCHHHHhcCCCCceEEeecCCCc--------------CCCchhHHHHHHHhcCCCCcE--EecCCCCCcccccc
Q psy9059 52 TGITYLYTYSERLMGSNGLAMVFPLQEQI--------------PIQTPQQMSERIYMYTYSERL--MGSNGLAMVFPLQE 115 (269)
Q Consensus 52 ~~l~~~~~~~~a~~~~~~~~V~E~vpE~l--------------~~K~k~~l~~~l~~~~~~~~i--iaSnTS~l~~p~~~ 115 (269)
.+++.. + .+++.++| +|+.+++..- +++ +++.++|.++++ +++ +.||+++. ++.
T Consensus 55 ~~i~~~-d-~~~~~~aD--vViiav~~~~~~g~~r~dl~~~n~~i~--~~i~~~i~~~~~-~~~ii~~tNp~~~---~~~ 124 (319)
T 1a5z_A 55 ANIYAG-D-YADLKGSD--VVIVAAGVPQKPGETRLQLLGRNARVM--KEIARNVSKYAP-DSIVIVVTNPVDV---LTY 124 (319)
T ss_dssp CEEEEC-C-GGGGTTCS--EEEECCCCCCCSSCCHHHHHHHHHHHH--HHHHHHHHHHCT-TCEEEECSSSHHH---HHH
T ss_pred cEEEeC-C-HHHhCCCC--EEEEccCCCCCCCCCHHHHHHHHHHHH--HHHHHHHHhhCC-CeEEEEeCCcHHH---HHH
Confidence 456653 5 46776666 9999998632 245 999999999974 654 47888775 233
Q ss_pred c-CCC-C-CCCeEEEeeccCCCCCCcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEEeccCchhHH---HHHHHHHHHH
Q psy9059 116 Q-IPI-Q-TPHLIIGMHYFSPVDKMQLLEIITTEQTSQDTAASAVAVGLKQGKVVITVKDGPGFYTT---RILSTMLSEA 189 (269)
Q Consensus 116 ~-~~~-~-~p~R~i~~HffnP~~~~~lVEiv~~~~Ts~e~~~~~~~~~~~lGk~pv~vkd~pGfI~n---Rll~al~~EA 189 (269)
+ ... . .|+|++|+ .|..++......+++.+|..| ++++++++. +.+.++|+++
T Consensus 125 ~~~~~~~~~~~rviG~------------------~t~ld~~r~~~~la~~lgv~~---~~v~~~v~G~hg~~~~p~~s~~ 183 (319)
T 1a5z_A 125 FFLKESGMDPRKVFGS------------------GTVLDTARLRTLIAQHCGFSP---RSVHVYVIGEHGDSEVPVWSGA 183 (319)
T ss_dssp HHHHHHTCCTTTEEEC------------------TTHHHHHHHHHHHHHHHTCCG---GGEECCEEBCSSTTCEECGGGC
T ss_pred HHHHHhCCChhhEEee------------------CccHHHHHHHHHHHHHhCcCH---HHceEEEEeCCCCCcccchhhc
Confidence 2 222 2 57899988 577777777777888888654 566677766 6666666654
No 69
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=96.31 E-value=0.0065 Score=52.85 Aligned_cols=138 Identities=12% Similarity=0.095 Sum_probs=80.9
Q ss_pred cCHHHHhcCCCCceEEeecCCCcCCCchhHHHHHHHhcCCCCcEEecCCCCCccccccc-CCCCCCCeEEEeeccCCCCC
Q psy9059 58 YTYSERLMGSNGLAMVFPLQEQIPIQTPQQMSERIYMYTYSERLMGSNGLAMVFPLQEQ-IPIQTPHLIIGMHYFSPVDK 136 (269)
Q Consensus 58 ~~~~~a~~~~~~~~V~E~vpE~l~~K~k~~l~~~l~~~~~~~~iiaSnTS~l~~p~~~~-~~~~~p~R~i~~HffnP~~~ 136 (269)
.+.+|++.++| +|+.++|.....+ . + .++.+.+++ .++-.||... .....+ +.+..+. ++..+.+.++..
T Consensus 48 ~~~~~~~~~aD--vvi~~v~~~~~~~--~-~-~~~~~~~~~-~vi~~s~~~~-~~~~~l~~~~~~~g-~~~~~v~~~~~~ 118 (264)
T 1i36_A 48 ETSEEDVYSCP--VVISAVTPGVALG--A-A-RRAGRHVRG-IYVDINNISP-ETVRMASSLIEKGG-FVDAAIMGSVRR 118 (264)
T ss_dssp ECCHHHHHTSS--EEEECSCGGGHHH--H-H-HHHHTTCCS-EEEECSCCCH-HHHHHHHHHCSSSE-EEEEEECSCHHH
T ss_pred CCHHHHHhcCC--EEEEECCCHHHHH--H-H-HHHHHhcCc-EEEEccCCCH-HHHHHHHHHHhhCC-eeeeeeeCCccc
Confidence 67888887766 9999999866554 3 3 567677777 6665544332 011222 2333333 666666665431
Q ss_pred --CcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEEeccCch-----hHHHH----HHHHHHHHHHHH-HcCCCHHHHHH
Q psy9059 137 --MQLLEIITTEQTSQDTAASAVAVGLKQGKVVITVKDGPGF-----YTTRI----LSTMLSEAMRIL-QEGTSPKDLDR 204 (269)
Q Consensus 137 --~~lVEiv~~~~Ts~e~~~~~~~~~~~lGk~pv~vkd~pGf-----I~nRl----l~al~~EA~~lv-~eGis~edID~ 204 (269)
....-++.++.. +.+.. ++.+|+.++.+.+.+|. +.+.. ....++|++.+. ..|++++.++.
T Consensus 119 ~~~g~~~~~~g~~~-----~~~~~-l~~~g~~~~~~~~~~g~~~~~kl~~n~~~~~~~~~~~Ea~~la~~~G~~~~~~~~ 192 (264)
T 1i36_A 119 KGADIRIIASGRDA-----EEFMK-LNRYGLNIEVRGREPGDASAIKMLRSSYTKGVSALLWETLTAAHRLGLEEDVLEM 192 (264)
T ss_dssp HGGGCEEEEESTTH-----HHHHG-GGGGTCEEEECSSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred cccCCeEEecCCcH-----HHhhh-HHHcCCeeEECCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHH
Confidence 112234455432 56667 88899998888654554 22332 356788998775 46887655533
Q ss_pred HHHhcC
Q psy9059 205 LTKQFG 210 (269)
Q Consensus 205 a~~g~G 210 (269)
+....|
T Consensus 193 ~~~~~g 198 (264)
T 1i36_A 193 LEYTEG 198 (264)
T ss_dssp HHTTSC
T ss_pred HHHhcC
Confidence 333444
No 70
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=96.30 E-value=0.002 Score=56.66 Aligned_cols=138 Identities=12% Similarity=0.082 Sum_probs=85.7
Q ss_pred HHHHhcCCCCceEEeecCCCcCCCchhHHHHHHHhcCCCCcEEe--cCCCCCccccccc-CCCCC-CCeEEEeecc-CCC
Q psy9059 60 YSERLMGSNGLAMVFPLQEQIPIQTPQQMSERIYMYTYSERLMG--SNGLAMVFPLQEQ-IPIQT-PHLIIGMHYF-SPV 134 (269)
Q Consensus 60 ~~~a~~~~~~~~V~E~vpE~l~~K~k~~l~~~l~~~~~~~~iia--SnTS~l~~p~~~~-~~~~~-p~R~i~~Hff-nP~ 134 (269)
+.|++.++| +|+.|+|....++ . +++++.+.+++++++. ||++.. ....+ +.+.. .-+++.. +. +++
T Consensus 49 ~~~~~~~~D--~vi~~v~~~~~~~--~-v~~~l~~~l~~~~~vv~~s~~~~~--~~~~l~~~~~~~g~~~~~~-p~~~~~ 120 (289)
T 2cvz_A 49 PLERVAEAR--VIFTCLPTTREVY--E-VAEALYPYLREGTYWVDATSGEPE--ASRRLAERLREKGVTYLDA-PVSGGT 120 (289)
T ss_dssp CGGGGGGCS--EEEECCSSHHHHH--H-HHHHHTTTCCTTEEEEECSCCCHH--HHHHHHHHHHTTTEEEEEC-CEESHH
T ss_pred HHHHHhCCC--EEEEeCCChHHHH--H-HHHHHHhhCCCCCEEEECCCCCHH--HHHHHHHHHHHcCCEEEEe-cCCCCh
Confidence 677776655 9999999865555 3 6688888888888877 433321 22222 22222 2234433 21 111
Q ss_pred C---CCcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEEecc-Cch----hHHH---HHHHHHHHHHHHHH-cCCCHHHH
Q psy9059 135 D---KMQLLEIITTEQTSQDTAASAVAVGLKQGKVVITVKDG-PGF----YTTR---ILSTMLSEAMRILQ-EGTSPKDL 202 (269)
Q Consensus 135 ~---~~~lVEiv~~~~Ts~e~~~~~~~~~~~lGk~pv~vkd~-pGf----I~nR---ll~al~~EA~~lv~-eGis~edI 202 (269)
. .-.+.-++. ++++..+.+.+++ .+|+.++.+.+. .+. ..|. +....++|++.+.+ .|++++++
T Consensus 121 ~~~~~g~~~~~~~---~~~~~~~~~~~ll-~~g~~~~~~~~~~~~~~~k~~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~ 196 (289)
T 2cvz_A 121 SGAEAGTLTVMLG---GPEEAVERVRPFL-AYAKKVVHVGPVGAGHAVKAINNALLAVNLWAAGEGLLALVKQGVSAEKA 196 (289)
T ss_dssp HHHHHTCEEEEEE---SCHHHHHHHGGGC-TTEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHH
T ss_pred hHHhhCCeEEEEC---CCHHHHHHHHHHH-hhcCCeEEcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcCHHHH
Confidence 1 012233343 3788999999999 999988888553 222 2354 34678899988765 67899999
Q ss_pred HHHHH-hc
Q psy9059 203 DRLTK-QF 209 (269)
Q Consensus 203 D~a~~-g~ 209 (269)
+.++. +.
T Consensus 197 ~~~~~~~~ 204 (289)
T 2cvz_A 197 LEVINASS 204 (289)
T ss_dssp HHHHTTST
T ss_pred HHHHHccC
Confidence 88886 54
No 71
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=96.21 E-value=0.0082 Score=57.64 Aligned_cols=147 Identities=10% Similarity=0.091 Sum_probs=93.1
Q ss_pred CeEEecCHHHHhcC-CCCceEEeecCCCcCCCchhHHHHHHHhcCCCCcEEecCCCCCccccccc-CCCC-CCCeEEEee
Q psy9059 53 GITYLYTYSERLMG-SNGLAMVFPLQEQIPIQTPQQMSERIYMYTYSERLMGSNGLAMVFPLQEQ-IPIQ-TPHLIIGMH 129 (269)
Q Consensus 53 ~l~~~~~~~~a~~~-~~~~~V~E~vpE~l~~K~k~~l~~~l~~~~~~~~iiaSnTS~l~~p~~~~-~~~~-~p~R~i~~H 129 (269)
+++.+.|++|++.+ .++|+|+.+||....++ +++++|.++++++++|.+.+++.......+ +.+. ..-+++++-
T Consensus 52 gi~~~~s~~e~v~~l~~aDvVilavp~~~~v~---~vl~~l~~~l~~g~iiId~s~~~~~~~~~l~~~l~~~g~~~v~~p 128 (474)
T 2iz1_A 52 NLVFTKTLEEFVGSLEKPRRIMLMVQAGAATD---ATIKSLLPLLDIGDILIDGGNTHFPDTMRRNAELADSGINFIGTG 128 (474)
T ss_dssp CEEECSSHHHHHHTBCSSCEEEECCCTTHHHH---HHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHTTTSSCEEEEEE
T ss_pred CeEEeCCHHHHHhhccCCCEEEEEccCchHHH---HHHHHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHCCCeEECCC
Confidence 57888999999876 12459999999876555 466889888888777776555541111222 2222 223455442
Q ss_pred ccCCCC---CCcEEEEeCCCCCCHHHHHHHHHHHHhCCcE--------EEEEe-ccCc----hhHHHHH---HHHHHHHH
Q psy9059 130 YFSPVD---KMQLLEIITTEQTSQDTAASAVAVGLKQGKV--------VITVK-DGPG----FYTTRIL---STMLSEAM 190 (269)
Q Consensus 130 ffnP~~---~~~lVEiv~~~~Ts~e~~~~~~~~~~~lGk~--------pv~vk-d~pG----fI~nRll---~al~~EA~ 190 (269)
.+.++. .-+. ++.+. +++..+.+..+++.+|.. +..+. ...| ++.|.+. ..+++|++
T Consensus 129 v~gg~~~a~~g~~--i~~gg--~~~~~~~v~~ll~~~g~~~~~dge~~~~~~g~~g~g~~~Kl~~N~~~~~~~~~laEa~ 204 (474)
T 2iz1_A 129 VSGGEKGALLGPS--MMPGG--QKEAYDLVAPIFEQIAAKAPQDGKPCVAYMGANGAGHYVKMVHNGIEYGDMQLIAESY 204 (474)
T ss_dssp ECSHHHHHHHCCC--EEEEE--CHHHHHHHHHHHHHHSCBCTTTCCBSBCCCBSTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCChhhhccCCe--EEecC--CHHHHHHHHHHHHHHhcccccCCCceEEEECCccHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 221110 1111 33332 789999999999999887 34443 2223 3556653 57889999
Q ss_pred HHHHc--CCCHHHHHHHH
Q psy9059 191 RILQE--GTSPKDLDRLT 206 (269)
Q Consensus 191 ~lv~e--Gis~edID~a~ 206 (269)
.+... |++++++..++
T Consensus 205 ~l~~~~~Gl~~~~~~~l~ 222 (474)
T 2iz1_A 205 DLLKRILGLSNAEIQAIF 222 (474)
T ss_dssp HHHHHTSCCCHHHHHHHH
T ss_pred HHHHHhcCCCHHHHHHHH
Confidence 98875 88999988776
No 72
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=95.95 E-value=0.039 Score=48.03 Aligned_cols=130 Identities=11% Similarity=0.012 Sum_probs=81.0
Q ss_pred CHHHHhcCCCCceEEeecCCCcCCCchhHHHHHHHhcCCCCcEEecCCCCCcccccc-cCCCCCCCeEE-Eeec-----c
Q psy9059 59 TYSERLMGSNGLAMVFPLQEQIPIQTPQQMSERIYMYTYSERLMGSNGLAMVFPLQE-QIPIQTPHLII-GMHY-----F 131 (269)
Q Consensus 59 ~~~~a~~~~~~~~V~E~vpE~l~~K~k~~l~~~l~~~~~~~~iiaSnTS~l~~p~~~-~~~~~~p~R~i-~~Hf-----f 131 (269)
+..+++.++| +|+-++|..- = .+++++|.++++++++|.+.+.++ ...+ +... .++ ++ +.++ .
T Consensus 56 ~~~~~~~~~d--~vi~~v~~~~--~--~~v~~~l~~~l~~~~~vv~~~~g~--~~~~~l~~~-~~~-~~~g~~~~~~~~~ 125 (291)
T 1ks9_A 56 NDPDFLATSD--LLLVTLKAWQ--V--SDAVKSLASTLPVTTPILLIHNGM--GTIEELQNI-QQP-LLMGTTTHAARRD 125 (291)
T ss_dssp SCHHHHHTCS--EEEECSCGGG--H--HHHHHHHHTTSCTTSCEEEECSSS--CTTGGGTTC-CSC-EEEEEECCEEEEE
T ss_pred cCccccCCCC--EEEEEecHHh--H--HHHHHHHHhhCCCCCEEEEecCCC--CcHHHHHHh-cCC-eEEEEEeEccEEc
Confidence 3357777665 9999999863 3 678899999999999888877776 3333 3222 233 44 3332 2
Q ss_pred CCCCCCcEEEEeCC-----C-CCCHHHHHHHHHHHHhCCcEEEEEeccCchhHH--------------------------
Q psy9059 132 SPVDKMQLLEIITT-----E-QTSQDTAASAVAVGLKQGKVVITVKDGPGFYTT-------------------------- 179 (269)
Q Consensus 132 nP~~~~~lVEiv~~-----~-~Ts~e~~~~~~~~~~~lGk~pv~vkd~pGfI~n-------------------------- 179 (269)
.| . ..++..+ . ..+++..+.+.++++..|..+....|..+...+
T Consensus 126 ~p-~---~~~~~~g~~~i~~~~~~~~~~~~~~~ll~~~g~~~~~~~~~~~~~~~Kl~~n~~~n~~tal~~~~~g~~~~~~ 201 (291)
T 1ks9_A 126 GN-V---IIHVANGITHIGPARQQDGDYSYLADILQTVLPDVAWHNNIRAELWRKLAVNCVINPLTAIWNCPNGELRHHP 201 (291)
T ss_dssp TT-E---EEEEECCCEEEEESSGGGTTCTHHHHHHHTTSSCEEECTTHHHHHHHHHHHHHHHHHHHHHTTCCGGGGGGCH
T ss_pred CC-E---EEEecccceEEccCCCCcchHHHHHHHHHhcCCCCeecHHHHHHHHHHHeeeeeecHHHHHHCCCchHHHhHH
Confidence 44 2 2233222 1 234566778889999999887766654333222
Q ss_pred HHHHHHHHHHHHHHH-cCC--CHHHH
Q psy9059 180 RILSTMLSEAMRILQ-EGT--SPKDL 202 (269)
Q Consensus 180 Rll~al~~EA~~lv~-eGi--s~edI 202 (269)
.+...+++|++.+.+ .|+ +.+++
T Consensus 202 ~~~~~~~~E~~~va~a~G~~~~~~~~ 227 (291)
T 1ks9_A 202 QEIMQICEEVAAVIEREGHHTSAEDL 227 (291)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCCCHHHH
Confidence 455677788877754 677 34554
No 73
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=95.83 E-value=0.031 Score=53.47 Aligned_cols=149 Identities=5% Similarity=-0.027 Sum_probs=93.1
Q ss_pred CcCeEEecCHHHHhcCCCCceEEeecCCCcCC-------CchhHHHHHHHhcCCCCcEEecCCCCCccc-ccc-c-----
Q psy9059 51 HTGITYLYTYSERLMGSNGLAMVFPLQEQIPI-------QTPQQMSERIYMYTYSERLMGSNGLAMVFP-LQE-Q----- 116 (269)
Q Consensus 51 ~~~l~~~~~~~~a~~~~~~~~V~E~vpE~l~~-------K~k~~l~~~l~~~~~~~~iiaSnTS~l~~p-~~~-~----- 116 (269)
.++|++++|++|+++++| +|+-|||-..+- +.-+++.+.|.+++++++++..- ||.+ | .++ +
T Consensus 69 ~g~l~~ttd~~ea~~~aD--vvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~g~iVV~~-STv~-pgtt~~l~~~l~ 144 (446)
T 4a7p_A 69 AGRLSFTTDLAEGVKDAD--AVFIAVGTPSRRGDGHADLSYVFAAAREIAENLTKPSVIVTK-STVP-VGTGDEVERIIA 144 (446)
T ss_dssp TTCEEEESCHHHHHTTCS--EEEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCSCCEEEEC-SCCC-TTHHHHHHHHHH
T ss_pred cCCEEEECCHHHHHhcCC--EEEEEcCCCCccccCCccHHHHHHHHHHHHHhcCCCCEEEEe-CCCC-chHHHHHHHHHH
Confidence 478999999999998877 999999876532 22278889999999888877653 4552 2 111 1
Q ss_pred CCCCCCCeEEEeeccCCCCCCcEE---------EEeCCCCCCHHHHHHHHHHHHhCCcE---EEEEeccC-----chhHH
Q psy9059 117 IPIQTPHLIIGMHYFSPVDKMQLL---------EIITTEQTSQDTAASAVAVGLKQGKV---VITVKDGP-----GFYTT 179 (269)
Q Consensus 117 ~~~~~p~R~i~~HffnP~~~~~lV---------Eiv~~~~Ts~e~~~~~~~~~~~lGk~---pv~vkd~p-----GfI~n 179 (269)
+.... ..+-++ ++|....+-- =||-|. +++++.+.+..+++.+++. ++.+.+.. .++.|
T Consensus 145 e~~~~-~d~~v~--~~Pe~a~eG~a~~d~~~p~~ivvG~-~~~~~~~~~~~ly~~~~~~~~~~~~~~d~~~aE~~Kl~~N 220 (446)
T 4a7p_A 145 EVAPN-SGAKVV--SNPEFLREGAAIEDFKRPDRVVVGT-EDEFARQVMREIYRPLSLNQSAPVLFTGRRTSELIKYAAN 220 (446)
T ss_dssp HHSTT-SCCEEE--ECCCCCCTTSHHHHHHSCSCEEEEC-SCHHHHHHHHHHHCSCC-----CEEEECHHHHHHHHHHHH
T ss_pred HhCCC-CCceEE--eCcccccccchhhhccCCCEEEEeC-CcHHHHHHHHHHHHHHhcCCCeEEEeCCHHHHHHHHHHHH
Confidence 11111 222222 3554433221 133332 3678999999999988875 56665422 23333
Q ss_pred HH---HHHHHHHHHHHHH-cCCCHHHHHHHHH
Q psy9059 180 RI---LSTMLSEAMRILQ-EGTSPKDLDRLTK 207 (269)
Q Consensus 180 Rl---l~al~~EA~~lv~-eGis~edID~a~~ 207 (269)
-+ ..+.+||+..+.+ -|++++++=.++.
T Consensus 221 ~~~a~~ia~~nE~~~l~~~~GiD~~~v~~~~~ 252 (446)
T 4a7p_A 221 AFLAVKITFINEIADLCEQVGADVQEVSRGIG 252 (446)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHh
Confidence 33 3567799998875 6888888877764
No 74
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=95.78 E-value=0.0014 Score=59.57 Aligned_cols=69 Identities=13% Similarity=0.100 Sum_probs=50.5
Q ss_pred CcCeEEecCHHHHhcCCCCceEEeec--------------CCCcCCCchhHHHHHHHhcCCCCcEE--ecCCCCCccccc
Q psy9059 51 HTGITYLYTYSERLMGSNGLAMVFPL--------------QEQIPIQTPQQMSERIYMYTYSERLM--GSNGLAMVFPLQ 114 (269)
Q Consensus 51 ~~~l~~~~~~~~a~~~~~~~~V~E~v--------------pE~l~~K~k~~l~~~l~~~~~~~~ii--aSnTS~l~~p~~ 114 (269)
..+++++.++ ++++|+| +|++++ .++.+++ ++++++|++++ +++++ +||.... ++
T Consensus 56 ~~~i~~t~d~-~a~~~aD--~Vi~a~g~p~~~g~~r~dl~~~n~~i~--~~i~~~i~~~~-p~a~vi~~tNPv~~---~t 126 (309)
T 1ur5_A 56 DVRVTGTNNY-ADTANSD--VIVVTSGAPRKPGMSREDLIKVNADIT--RACISQAAPLS-PNAVIIMVNNPLDA---MT 126 (309)
T ss_dssp CCCEEEESCG-GGGTTCS--EEEECCCC--------CHHHHHHHHHH--HHHHHHHGGGC-TTCEEEECCSSHHH---HH
T ss_pred CeEEEECCCH-HHHCCCC--EEEEcCCCCCCCCCCHHHHHHHHHHHH--HHHHHHHHhhC-CCeEEEEcCCchHH---HH
Confidence 4678888888 8897776 999998 4556777 99999999998 77755 7887664 22
Q ss_pred cc--CCC-CCCCeEEEe
Q psy9059 115 EQ--IPI-QTPHLIIGM 128 (269)
Q Consensus 115 ~~--~~~-~~p~R~i~~ 128 (269)
.+ ... -.|+|++|+
T Consensus 127 ~~~~~~~~~~~~rviG~ 143 (309)
T 1ur5_A 127 YLAAEVSGFPKERVIGQ 143 (309)
T ss_dssp HHHHHHHCCCGGGEEEC
T ss_pred HHHHHHcCCCHHHEEEC
Confidence 32 112 236788887
No 75
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=95.56 E-value=0.0094 Score=57.34 Aligned_cols=148 Identities=11% Similarity=0.116 Sum_probs=91.4
Q ss_pred CeEEecCHHHHhcC-CCCceEEeecCCCcCCCchhHHHHHHHhcCCCCcEEecCCCCCccccccc-CCCC-CCCeEEEee
Q psy9059 53 GITYLYTYSERLMG-SNGLAMVFPLQEQIPIQTPQQMSERIYMYTYSERLMGSNGLAMVFPLQEQ-IPIQ-TPHLIIGMH 129 (269)
Q Consensus 53 ~l~~~~~~~~a~~~-~~~~~V~E~vpE~l~~K~k~~l~~~l~~~~~~~~iiaSnTS~l~~p~~~~-~~~~-~p~R~i~~H 129 (269)
+++.+.|++|++.. .++|+|+.+||....++ +++.+|.++++++++|.+.+++.......+ +.+. ..-+++++.
T Consensus 50 gi~~~~~~~e~v~~l~~aDvVilaVp~~~~v~---~vl~~l~~~l~~g~iII~~s~~~~~~~~~l~~~l~~~g~~~v~~p 126 (482)
T 2pgd_A 50 KVLGAHSLEEMVSKLKKPRRIILLVKAGQAVD---NFIEKLVPLLDIGDIIIDGGNSEYRDTMRRCRDLKDKGILFVGSG 126 (482)
T ss_dssp SCEECSSHHHHHHHBCSSCEEEECSCTTHHHH---HHHHHHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CeEEeCCHHHHHhhccCCCEEEEeCCChHHHH---HHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEeCCC
Confidence 47788899999851 13449999999866555 466788888888777776555541111122 1111 223555543
Q ss_pred ccCCCC---CCcEEEEeCCCCCCHHHHHHHHHHHHhCCcEE-------EEE-eccCc----hhHHHHH---HHHHHHHHH
Q psy9059 130 YFSPVD---KMQLLEIITTEQTSQDTAASAVAVGLKQGKVV-------ITV-KDGPG----FYTTRIL---STMLSEAMR 191 (269)
Q Consensus 130 ffnP~~---~~~lVEiv~~~~Ts~e~~~~~~~~~~~lGk~p-------v~v-kd~pG----fI~nRll---~al~~EA~~ 191 (269)
.+.++. .-+. ++.+. +++..+.+..+++.+|..+ ..+ ....| ++.|.+. ..+++|++.
T Consensus 127 v~g~~~~a~~g~~--i~~gg--~~e~~~~v~~ll~~~g~~v~d~~~~~~~~g~~g~g~~~Kl~~N~~~~~~~~~i~Ea~~ 202 (482)
T 2pgd_A 127 VSGGEDGARYGPS--LMPGG--NKEAWPHIKAIFQGIAAKVGTGEPCCDWVGDDGAGHFVKMVHNGIEYGDMQLICEAYH 202 (482)
T ss_dssp EESHHHHHHHCCE--EEEEE--CTTTHHHHHHHHHHHSCBCTTSCBSCCCCEETTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCChhhhccCCe--EEeCC--CHHHHHHHHHHHHHhhhhccCCCcceEEECCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 332211 0111 23332 4678888999999998875 344 23333 3456554 578899999
Q ss_pred HHHc--CCCHHHHHHHHH
Q psy9059 192 ILQE--GTSPKDLDRLTK 207 (269)
Q Consensus 192 lv~e--Gis~edID~a~~ 207 (269)
+.+. |+++++++.++.
T Consensus 203 l~~~~~G~~~~~~~~~~~ 220 (482)
T 2pgd_A 203 LMKDVLGLGHKEMAKAFE 220 (482)
T ss_dssp HHHHTSCCCHHHHHHHHH
T ss_pred HHHhcCCcCHHHHHHHHH
Confidence 8874 779999988873
No 76
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=95.55 E-value=0.019 Score=55.32 Aligned_cols=147 Identities=13% Similarity=0.114 Sum_probs=93.6
Q ss_pred CeEEecCHHHHhcC-CCCceEEeecCCCcCCCchhHHHHHHHhcCCCCcEEecCCCCCccccccc-CCC-CCCCeEEEee
Q psy9059 53 GITYLYTYSERLMG-SNGLAMVFPLQEQIPIQTPQQMSERIYMYTYSERLMGSNGLAMVFPLQEQ-IPI-QTPHLIIGMH 129 (269)
Q Consensus 53 ~l~~~~~~~~a~~~-~~~~~V~E~vpE~l~~K~k~~l~~~l~~~~~~~~iiaSnTS~l~~p~~~~-~~~-~~p~R~i~~H 129 (269)
+++.+.|++|++.+ ..+|+|+-+||..-.++ +++++|.++++++++|.+.+++....+..+ +.+ ...-+++.+-
T Consensus 62 gi~~~~s~~e~v~~l~~aDvVil~Vp~~~~v~---~vl~~l~~~l~~g~iIId~s~g~~~~t~~l~~~l~~~g~~~v~~p 138 (480)
T 2zyd_A 62 KLVPYYTVKEFVESLETPRRILLMVKAGAGTD---AAIDSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGFNFIGTG 138 (480)
T ss_dssp CEEECSSHHHHHHTBCSSCEEEECSCSSSHHH---HHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CeEEeCCHHHHHhCCCCCCEEEEECCCHHHHH---HHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHCCCCeeCCc
Confidence 58888999999976 12449999999865554 677899999988877776655541111112 111 1234555442
Q ss_pred ccCCC---CCCcEEEEeCCCCCCHHHHHHHHHHHHhCCcE-------EEEEec-cCch----hHHHH---HHHHHHHHHH
Q psy9059 130 YFSPV---DKMQLLEIITTEQTSQDTAASAVAVGLKQGKV-------VITVKD-GPGF----YTTRI---LSTMLSEAMR 191 (269)
Q Consensus 130 ffnP~---~~~~lVEiv~~~~Ts~e~~~~~~~~~~~lGk~-------pv~vkd-~pGf----I~nRl---l~al~~EA~~ 191 (269)
-...+ ..-+ . ++.+. +++..+.+..+++.+|.. +..+.+ ..|. +.|.+ ....++|++.
T Consensus 139 v~gg~~~a~~g~-~-i~~gg--~~~~~~~v~~ll~~~g~~~~dGe~~v~~~g~~G~g~~~Kl~~N~~~~~~~~~laEa~~ 214 (480)
T 2zyd_A 139 VSGGEEGALKGP-S-IMPGG--QKEAYELVAPILTKIAAVAEDGEPCVTYIGADGAGHYVKMVHNGIEYGDMQLIAEAYS 214 (480)
T ss_dssp EESHHHHHHHCC-E-EEEES--CHHHHHHHHHHHHHHSCBCTTSCBSBCCCBSTTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCHhHHhcCC-e-EEecC--CHHHHHHHHHHHHHHhccccCCCceEEEECCccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22111 1122 2 45442 689999999999999987 444532 2232 34554 4678899999
Q ss_pred HHHc--CCCHHHHHHHH
Q psy9059 192 ILQE--GTSPKDLDRLT 206 (269)
Q Consensus 192 lv~e--Gis~edID~a~ 206 (269)
+... |++++++..++
T Consensus 215 l~~~~lGl~~~~~~~l~ 231 (480)
T 2zyd_A 215 LLKGGLNLTNEELAQTF 231 (480)
T ss_dssp HHHHHHCCCHHHHHHHH
T ss_pred HHHHhcCCCHHHHHHHH
Confidence 8876 89999888765
No 77
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=95.50 E-value=0.0094 Score=50.98 Aligned_cols=105 Identities=4% Similarity=-0.011 Sum_probs=67.8
Q ss_pred EecCHHHHhcCCCCceEEeecCCCcCCCchhHHHHHHHhcCCCCcEEecCCCCCc-----c-------cccccC-CCCCC
Q psy9059 56 YLYTYSERLMGSNGLAMVFPLQEQIPIQTPQQMSERIYMYTYSERLMGSNGLAMV-----F-------PLQEQI-PIQTP 122 (269)
Q Consensus 56 ~~~~~~~a~~~~~~~~V~E~vpE~l~~K~k~~l~~~l~~~~~~~~iiaSnTS~l~-----~-------p~~~~~-~~~~p 122 (269)
...+..+++.++| +|+.++|- ... .+++++|.. . ++.++.+.+.++. . +++.++ .+. .
T Consensus 71 ~~~~~~~~~~~aD--vVilavp~--~~~--~~v~~~l~~-~-~~~ivi~~~~g~~~~~~~~~~~~~~~~~~~l~~~l~-~ 141 (220)
T 4huj_A 71 VKAVELKDALQAD--VVILAVPY--DSI--ADIVTQVSD-W-GGQIVVDASNAIDFPAFKPRDLGGRLSTEIVSELVP-G 141 (220)
T ss_dssp EEECCHHHHTTSS--EEEEESCG--GGH--HHHHTTCSC-C-TTCEEEECCCCBCTTTCCBCCCTTCCHHHHHHHHST-T
T ss_pred cccChHHHHhcCC--EEEEeCCh--HHH--HHHHHHhhc-c-CCCEEEEcCCCCCcccccccccCCCcHHHHHHHHCC-C
Confidence 3445567776665 99999983 445 777777766 4 4677777776651 0 112222 233 4
Q ss_pred CeEEEeeccCCCCCCc---------EEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEEe
Q psy9059 123 HLIIGMHYFSPVDKMQ---------LLEIITTEQTSQDTAASAVAVGLKQGKVVITVK 171 (269)
Q Consensus 123 ~R~i~~HffnP~~~~~---------lVEiv~~~~Ts~e~~~~~~~~~~~lGk~pv~vk 171 (269)
.+++...++.|...+. ..-++.+ .+++..+.+.++++.+|+.|+.+.
T Consensus 142 ~~vv~~~~~~~~~v~~~g~~~~~~~~~v~~~g--~~~~~~~~v~~l~~~~G~~~~~~G 197 (220)
T 4huj_A 142 AKVVKAFNTLPAAVLAADPDKGTGSRVLFLSG--NHSDANRQVAELISSLGFAPVDLG 197 (220)
T ss_dssp CEEEEESCSSCHHHHTSCSBCSSCEEEEEEEE--SCHHHHHHHHHHHHHTTCEEEECC
T ss_pred CCEEECCCCCCHHHhhhCcccCCCCeeEEEeC--CCHHHHHHHHHHHHHhCCCeEeeC
Confidence 5777776655543332 3334443 469999999999999999999874
No 78
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=95.28 E-value=0.032 Score=53.30 Aligned_cols=145 Identities=8% Similarity=0.002 Sum_probs=85.6
Q ss_pred CcCeEEecCHHHHhcCCCCceEEeecCCCcCCC-------chhHHHHHHHhcCCCCcEEecCCCCCcccccc-c-CCCCC
Q psy9059 51 HTGITYLYTYSERLMGSNGLAMVFPLQEQIPIQ-------TPQQMSERIYMYTYSERLMGSNGLAMVFPLQE-Q-IPIQT 121 (269)
Q Consensus 51 ~~~l~~~~~~~~a~~~~~~~~V~E~vpE~l~~K-------~k~~l~~~l~~~~~~~~iiaSnTS~l~~p~~~-~-~~~~~ 121 (269)
.+++++++|++|+++++| +|+.|||+..+.+ .=.++.+.|.+ +++++++. ..|+.+.-.++ + ..+.
T Consensus 94 ~~~l~~ttd~~ea~~~aD--vViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~~g~iVV-~~STv~pgtt~~l~~~l~- 168 (432)
T 3pid_A 94 PLNFRATTDKHDAYRNAD--YVIIATPTDYDPKTNYFNTSTVEAVIRDVTE-INPNAVMI-IKSTIPVGFTRDIKERLG- 168 (432)
T ss_dssp CCCEEEESCHHHHHTTCS--EEEECCCCEEETTTTEEECHHHHHHHHHHHH-HCTTSEEE-ECSCCCTTHHHHHHHHHT-
T ss_pred cCCeEEEcCHHHHHhCCC--EEEEeCCCccccccccccHHHHHHHHHHHHh-cCCCcEEE-EeCCCChHHHHHHHHHHh-
Confidence 368999999999998777 9999999986543 11355677777 67777664 34554211122 2 1121
Q ss_pred CCeEEEeeccCCCCCCcEE---------EEeCCCCCCHHHHHHHHHHHHh--CCc-EEEEEecc-----CchhHHHH---
Q psy9059 122 PHLIIGMHYFSPVDKMQLL---------EIITTEQTSQDTAASAVAVGLK--QGK-VVITVKDG-----PGFYTTRI--- 181 (269)
Q Consensus 122 p~R~i~~HffnP~~~~~lV---------Eiv~~~~Ts~e~~~~~~~~~~~--lGk-~pv~vkd~-----pGfI~nRl--- 181 (269)
++-++ |+|..+.+-- =||-|. +++..+++..++.. +++ .|+.+.+. --.+.|-+
T Consensus 169 -~~~v~---~sPe~~~~G~A~~~~l~p~rIvvG~--~~~~~~~~~~ll~~~~~~~~~~v~~~~~~~AE~~Kl~~N~~~a~ 242 (432)
T 3pid_A 169 -IDNVI---FSPEFLREGRALYDNLHPSRIVIGE--RSARAERFADLLKEGAIKQDIPTLFTDSTEAEAIKLFANTYLAL 242 (432)
T ss_dssp -CCCEE---ECCCCCCTTSHHHHHHSCSCEEESS--CSHHHHHHHHHHHHHCSSSSCCEEECCHHHHHHHHHHHHHHHHH
T ss_pred -hccEe---ecCccCCcchhhhcccCCceEEecC--CHHHHHHHHHHHHhhhccCCCeEEecCccHHHHHHHHHHHHHHH
Confidence 12222 3777654321 133332 23566777777765 443 35555321 11233333
Q ss_pred HHHHHHHHHHHHH-cCCCHHHHHHHH
Q psy9059 182 LSTMLSEAMRILQ-EGTSPKDLDRLT 206 (269)
Q Consensus 182 l~al~~EA~~lv~-eGis~edID~a~ 206 (269)
..+++||+..+.+ .|++++++=.++
T Consensus 243 ~Ia~~nEl~~lae~~GiD~~~v~~~~ 268 (432)
T 3pid_A 243 RVAYFNELDSYAESQGLNSKQIIEGV 268 (432)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 3567899998876 688887776666
No 79
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=95.27 E-value=0.0056 Score=55.37 Aligned_cols=68 Identities=12% Similarity=0.156 Sum_probs=46.5
Q ss_pred cCeEEecCHHHHhcCCCCceEEeec--CC------------CcCCCchhHHHHHHHhcCCCCcEE--ecCCCCCcccccc
Q psy9059 52 TGITYLYTYSERLMGSNGLAMVFPL--QE------------QIPIQTPQQMSERIYMYTYSERLM--GSNGLAMVFPLQE 115 (269)
Q Consensus 52 ~~l~~~~~~~~a~~~~~~~~V~E~v--pE------------~l~~K~k~~l~~~l~~~~~~~~ii--aSnTS~l~~p~~~ 115 (269)
.+++. .++ +++.++| +|++++ |+ +++++ ++++++|.+++ +++++ +||++.. ....
T Consensus 55 ~~i~~-~~~-~a~~~aD--vVIi~~~~~~~~g~~r~dl~~~n~~i~--~~i~~~i~~~~-p~~~vi~~tNP~~~--~~~~ 125 (304)
T 2v6b_A 55 TRVWH-GGH-SELADAQ--VVILTAGANQKPGESRLDLLEKNADIF--RELVPQITRAA-PDAVLLVTSNPVDL--LTDL 125 (304)
T ss_dssp CEEEE-ECG-GGGTTCS--EEEECC------------CHHHHHHHH--HHHHHHHHHHC-SSSEEEECSSSHHH--HHHH
T ss_pred eEEEE-CCH-HHhCCCC--EEEEcCCCCCCCCCcHHHHHHhHHHHH--HHHHHHHHHhC-CCeEEEEecCchHH--HHHH
Confidence 45554 454 6787766 999999 54 55567 99999999996 66654 7998876 3322
Q ss_pred cCCCCCCCeEEEe
Q psy9059 116 QIPIQTPHLIIGM 128 (269)
Q Consensus 116 ~~~~~~p~R~i~~ 128 (269)
+.....|+|++|+
T Consensus 126 ~~~~~~~~rviG~ 138 (304)
T 2v6b_A 126 ATQLAPGQPVIGS 138 (304)
T ss_dssp HHHHSCSSCEEEC
T ss_pred HHHhCChhcEEeC
Confidence 3222278898887
No 80
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=95.01 E-value=0.025 Score=54.36 Aligned_cols=148 Identities=11% Similarity=0.056 Sum_probs=91.4
Q ss_pred CeEEecCHHHHhcCC-CCceEEeecCCCcCCCchhHHHHHHHhcCCCCcEEecCCCCCccccccc-CCCC-CCCeEEEee
Q psy9059 53 GITYLYTYSERLMGS-NGLAMVFPLQEQIPIQTPQQMSERIYMYTYSERLMGSNGLAMVFPLQEQ-IPIQ-TPHLIIGMH 129 (269)
Q Consensus 53 ~l~~~~~~~~a~~~~-~~~~V~E~vpE~l~~K~k~~l~~~l~~~~~~~~iiaSnTS~l~~p~~~~-~~~~-~p~R~i~~H 129 (269)
++..+.|++|++.+. ++|+|+.+||....++ +++++|.++++++++|.+.+++.......+ +.+. ..-+++++.
T Consensus 52 ~i~~~~~~~e~v~~l~~aDvVilaVp~~~~v~---~vl~~l~~~l~~g~iIId~sng~~~~~~~l~~~l~~~g~~~v~~p 128 (478)
T 1pgj_A 52 NLKAFETMEAFAASLKKPRKALILVQAGAATD---STIEQLKKVFEKGDILVDTGNAHFKDQGRRAQQLEAAGLRFLGMG 128 (478)
T ss_dssp GEEECSCHHHHHHHBCSSCEEEECCCCSHHHH---HHHHHHHHHCCTTCEEEECCCCCHHHHHHHHHHHHTTTCEEEEEE
T ss_pred CeEEECCHHHHHhcccCCCEEEEecCChHHHH---HHHHHHHhhCCCCCEEEECCCCChHHHHHHHHHHHHCCCeEEEee
Confidence 478889999998741 2449999999865555 566888888888877775554441111122 1121 233455443
Q ss_pred ccCCCC---CCcEEEEeCCCCCCHHHHHHHHHHHHhCCcE-------EEEEe-ccCch----hHHHHH---HHHHHHHHH
Q psy9059 130 YFSPVD---KMQLLEIITTEQTSQDTAASAVAVGLKQGKV-------VITVK-DGPGF----YTTRIL---STMLSEAMR 191 (269)
Q Consensus 130 ffnP~~---~~~lVEiv~~~~Ts~e~~~~~~~~~~~lGk~-------pv~vk-d~pGf----I~nRll---~al~~EA~~ 191 (269)
...++. .-+ -++.+. +++..+.+..+++.+|.. +..+. ...|. +.|.+. ..+++|++.
T Consensus 129 v~gg~~~a~~g~--~i~~gg--~~~~~~~v~~ll~~~g~~~~dg~~~v~~~g~~G~g~~~Kl~~N~~~~~~~~~i~Ea~~ 204 (478)
T 1pgj_A 129 ISGGEEGARKGP--AFFPGG--TLSVWEEIRPIVEAAAAKADDGRPCVTMNGSGGAGSCVKMYHNSGEYAILQIWGEVFD 204 (478)
T ss_dssp EESHHHHHHHCC--EEEEEE--CHHHHHHHHHHHHHHSCBCTTSCBSCCCCCSTTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCHHHHhcCC--eEeccC--CHHHHHHHHHHHHHhcccccCCCeeEEEeCCchHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 222111 112 133332 688999999999999886 44443 22332 345443 467899998
Q ss_pred HHH-cCCCHHHHHHHHH
Q psy9059 192 ILQ-EGTSPKDLDRLTK 207 (269)
Q Consensus 192 lv~-eGis~edID~a~~ 207 (269)
+.+ .|+++++++.++.
T Consensus 205 l~~~~G~~~~~~~~l~~ 221 (478)
T 1pgj_A 205 ILRAMGLNNDEVAAVLE 221 (478)
T ss_dssp HHHHTTCCHHHHHHHHH
T ss_pred HHHHcCCCHHHHHHHHH
Confidence 876 5779999888773
No 81
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=94.88 E-value=0.18 Score=46.29 Aligned_cols=137 Identities=9% Similarity=-0.109 Sum_probs=87.4
Q ss_pred cCeEEecCHHHHhcCCCCceEEeecCCCcCCCchhHHHHHHHh----cCCCCcEEecCCCCCcccc----ccc----C-C
Q psy9059 52 TGITYLYTYSERLMGSNGLAMVFPLQEQIPIQTPQQMSERIYM----YTYSERLMGSNGLAMVFPL----QEQ----I-P 118 (269)
Q Consensus 52 ~~l~~~~~~~~a~~~~~~~~V~E~vpE~l~~K~k~~l~~~l~~----~~~~~~iiaSnTS~l~~p~----~~~----~-~ 118 (269)
.+++++++++|++.++| +|+.+||. ... ++++++|.+ ++++++++.|.+++++ +. ..+ . .
T Consensus 89 ~~i~~~~~~~ea~~~aD--vVilav~~--~~~--~~vl~~i~~~~~~~l~~~~ivvs~~~Gi~-~~~~~~~~l~~~l~~~ 161 (375)
T 1yj8_A 89 HNIVAHSDLASVINDAD--LLIFIVPC--QYL--ESVLASIKESESIKIASHAKAISLTKGFI-VKKNQMKLCSNYISDF 161 (375)
T ss_dssp TTEEEESSTHHHHTTCS--EEEECCCH--HHH--HHHHHHHTC---CCCCTTCEEEECCCSCE-EETTEEECHHHHHHHH
T ss_pred CCeEEECCHHHHHcCCC--EEEEcCCH--HHH--HHHHHHHhhhhhccCCCCCEEEEeCCccc-cCCccccCHHHHHHHH
Confidence 36888999999997766 99999997 455 899999998 8999999999998873 21 111 1 1
Q ss_pred CCCCCeEEEeeccCCCCC------CcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEEeccCch----------------
Q psy9059 119 IQTPHLIIGMHYFSPVDK------MQLLEIITTEQTSQDTAASAVAVGLKQGKVVITVKDGPGF---------------- 176 (269)
Q Consensus 119 ~~~p~R~i~~HffnP~~~------~~lVEiv~~~~Ts~e~~~~~~~~~~~lGk~pv~vkd~pGf---------------- 176 (269)
... .+.+. ..|... .+ ..++.+. .+++..+.+.+++...|..+....|..|.
T Consensus 162 ~~~--~~~v~--~gp~~a~~v~~g~~-~~~~~~~-~~~~~~~~v~~ll~~~g~~~~~~~di~~~~~~k~l~N~~~~~~g~ 235 (375)
T 1yj8_A 162 LNI--PCSAL--SGANIAMDVAMENF-SEATIGG-NDKDSLVIWQRVFDLPYFKINCVNETIEVEICGALKNIITLACGF 235 (375)
T ss_dssp SSS--CEEEE--ECSCCHHHHHTTCC-EEEEEEC-SCHHHHHHHHHHHCBTTEEEEEESCSHHHHHHHHHHHHHHHHHHH
T ss_pred cCC--CEEEE--eCCchHHHHHhCCC-eEEEEec-CCHHHHHHHHHHhCCCCeEEEEeCCcHHHHHHHHHHHHHHHHHHH
Confidence 111 12211 222211 11 1222222 36788889999999999887776665331
Q ss_pred ------hHH---HHHHHHHHHHHHHHH-c--CCCHHH
Q psy9059 177 ------YTT---RILSTMLSEAMRILQ-E--GTSPKD 201 (269)
Q Consensus 177 ------I~n---Rll~al~~EA~~lv~-e--Gis~ed 201 (269)
..| .+....++|+..+.+ . |+++++
T Consensus 236 ~~~~~~~~n~~~a~~~~~~~E~~~la~a~G~G~~~~~ 272 (375)
T 1yj8_A 236 CDGLNLPTNSKSAIIRNGINEMILFGKVFFQKFNENI 272 (375)
T ss_dssp HHHTTCCHHHHHHHHHHHHHHHHHHHHHHSSCCCGGG
T ss_pred HhhccCChhHHHHHHHHHHHHHHHHHHHhccCCCcch
Confidence 112 345667788887765 4 465544
No 82
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=94.58 E-value=0.038 Score=49.97 Aligned_cols=137 Identities=7% Similarity=-0.053 Sum_probs=88.1
Q ss_pred cCeEEecCHHHHhcCCCCceEEeecCCCcCCCchhHHHHHHHhcCCCCcEEecCCCCCcc-cc--ccc----C-CCCCCC
Q psy9059 52 TGITYLYTYSERLMGSNGLAMVFPLQEQIPIQTPQQMSERIYMYTYSERLMGSNGLAMVF-PL--QEQ----I-PIQTPH 123 (269)
Q Consensus 52 ~~l~~~~~~~~a~~~~~~~~V~E~vpE~l~~K~k~~l~~~l~~~~~~~~iiaSnTS~l~~-p~--~~~----~-~~~~p~ 123 (269)
.+++++++++|++.++| +|+.|||. ... .+++++|.+++++++++.|.++++.. |- ..+ . ...++
T Consensus 76 ~~~~~~~~~~~~~~~aD--~Vilav~~--~~~--~~v~~~i~~~l~~~~ivv~~~~Gi~~~~~~~~~l~~~l~~~~~~~- 148 (354)
T 1x0v_A 76 PNVVAVPDVVQAAEDAD--ILIFVVPH--QFI--GKICDQLKGHLKANATGISLIKGVDEGPNGLKLISEVIGERLGIP- 148 (354)
T ss_dssp TTEEEESSHHHHHTTCS--EEEECCCG--GGH--HHHHHHHTTCSCTTCEEEECCCCBCSSSSSCCBHHHHHHHHHTCC-
T ss_pred cCeEEEcCHHHHHcCCC--EEEEeCCH--HHH--HHHHHHHHhhCCCCCEEEEECCccCCCCCccccHHHHHHHHcCCC-
Confidence 36788899999997766 99999997 456 89999999999999999999988732 11 111 1 11111
Q ss_pred eEEEeeccCCCC------CCc-EEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEEeccCch--------------------
Q psy9059 124 LIIGMHYFSPVD------KMQ-LLEIITTEQTSQDTAASAVAVGLKQGKVVITVKDGPGF-------------------- 176 (269)
Q Consensus 124 R~i~~HffnP~~------~~~-lVEiv~~~~Ts~e~~~~~~~~~~~lGk~pv~vkd~pGf-------------------- 176 (269)
+.+ ...|-. -.+ .+.+ + ..+++..+.+.+++...|..+....|..+.
T Consensus 149 -~~v--~~gp~~a~~v~~g~~~~~~~--~-~~~~~~~~~v~~ll~~~g~~~~~~~di~~~~~~k~~~N~~~~~~g~~~~~ 222 (354)
T 1x0v_A 149 -MSV--LMGANIASEVADEKFCETTI--G-CKDPAQGQLLKELMQTPNFRITVVQEVDTVEICGALKNVVAVGAGFCDGL 222 (354)
T ss_dssp -EEE--EECSCCHHHHHTTCCEEEEE--E-CSSHHHHHHHHHHHCBTTEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred -EEE--EECCCcHHHHHhcCCceEEE--E-ECCHHHHHHHHHHhCCCCEEEEEcCCchHhHHHHHHHHHHHHHHHHHHHc
Confidence 111 122221 111 2222 2 246788899999999999887766654321
Q ss_pred --hHH---HHHHHHHHHHHHHHH-cCC---CHHH
Q psy9059 177 --YTT---RILSTMLSEAMRILQ-EGT---SPKD 201 (269)
Q Consensus 177 --I~n---Rll~al~~EA~~lv~-eGi---s~ed 201 (269)
--| .+....++|+..+.+ .|+ ++++
T Consensus 223 ~~~~n~~~~~~~~~~~E~~~la~a~G~~~~~~~~ 256 (354)
T 1x0v_A 223 GFGDNTKAAVIRLGLMEMIAFAKLFCSGPVSSAT 256 (354)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHHHSSSCCCGGG
T ss_pred cCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccc
Confidence 112 345677788887764 676 6654
No 83
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=94.55 E-value=0.12 Score=48.36 Aligned_cols=148 Identities=11% Similarity=0.042 Sum_probs=85.6
Q ss_pred CcCeEEecCHHHHhcCCCCceEEeecCCCc-------CCCchhHHHHHHHhcCCCCcEEec-CCCCCccccccc-CCCCC
Q psy9059 51 HTGITYLYTYSERLMGSNGLAMVFPLQEQI-------PIQTPQQMSERIYMYTYSERLMGS-NGLAMVFPLQEQ-IPIQT 121 (269)
Q Consensus 51 ~~~l~~~~~~~~a~~~~~~~~V~E~vpE~l-------~~K~k~~l~~~l~~~~~~~~iiaS-nTS~l~~p~~~~-~~~~~ 121 (269)
.+++++++++++++.++| +|+-|||... |++.-.++.+.|.+ +.++++|.. +|.+.. ....+ ....
T Consensus 58 ~~~l~~t~~~~~~~~~aD--vviiavpt~~~~~~~~~dl~~v~~v~~~i~~-l~~~~iVV~~ST~~~g-~~~~l~~~~~- 132 (402)
T 1dlj_A 58 QLSIKATLDSKAAYKEAE--LVIIATPTNYNSRINYFDTQHVETVIKEVLS-VNSHATLIIKSTIPIG-FITEMRQKFQ- 132 (402)
T ss_dssp CCCEEEESCHHHHHHHCS--EEEECCCCCEETTTTEECCHHHHHHHHHHHH-HCSSCEEEECSCCCTT-HHHHHHHHTT-
T ss_pred cCcEEEeCCHHHHhcCCC--EEEEecCCCcccCCCCccHHHHHHHHHHHHh-hCCCCEEEEeCCCCcc-HHHHHHHHhC-
Confidence 367899999999998766 9999999875 33223778888888 777777664 555431 12222 2221
Q ss_pred CCeEEEeeccCCCCCCcE------EE---EeCCCCCC-----HHHHHHHHHHHHh-CCc-E-EEEEeccC-----chhHH
Q psy9059 122 PHLIIGMHYFSPVDKMQL------LE---IITTEQTS-----QDTAASAVAVGLK-QGK-V-VITVKDGP-----GFYTT 179 (269)
Q Consensus 122 p~R~i~~HffnP~~~~~l------VE---iv~~~~Ts-----~e~~~~~~~~~~~-lGk-~-pv~vkd~p-----GfI~n 179 (269)
++.+. ++|....+- .. |+-|.... .+..+.+.+++.+ ... . ++.+.+.. .++.|
T Consensus 133 -~~~v~---~~Pe~~~~G~a~~~~~~~~riviG~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~di~~ae~~Kl~~N 208 (402)
T 1dlj_A 133 -TDRII---FSPEFLRESKALYDNLYPSRIIVSCEENDSPKVKADAEKFALLLKSAAKKNNVPVLIMGASEAEAVKLFAN 208 (402)
T ss_dssp -CSCEE---ECCCCCCTTSTTHHHHSCSCEEEECCTTSCHHHHHHHHHHHHHHHHHCSCSCCCEEEECHHHHHHHHHHHH
T ss_pred -CCeEE---ECCccccCcchhhcccCCCEEEEeCCCcccchhHHHHHHHHHHHhhhhccCCceEEecChHHHHHHHHHHH
Confidence 12222 233332211 11 44333322 1455666666654 222 2 55554421 23445
Q ss_pred HHH---HHHHHHHHHHHH-cCCCHHHHHHHHH
Q psy9059 180 RIL---STMLSEAMRILQ-EGTSPKDLDRLTK 207 (269)
Q Consensus 180 Rll---~al~~EA~~lv~-eGis~edID~a~~ 207 (269)
-+. .+++||+..+.+ .|++++++-.++.
T Consensus 209 ~~~a~~ia~~nE~~~l~~~~Gid~~~v~~~~~ 240 (402)
T 1dlj_A 209 TYLALRVAYFNELDTYAESRKLNSHMIIQGIS 240 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhc
Confidence 433 577899988876 6889988888773
No 84
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=93.40 E-value=0.01 Score=54.84 Aligned_cols=91 Identities=8% Similarity=0.068 Sum_probs=60.6
Q ss_pred CeEEecCHHHHhcCCCCceEEeecCCCcCCCchhHHHHHHHhcCCCCcEEecCCCCCcccccc--c-CCCCCCCeE--EE
Q psy9059 53 GITYLYTYSERLMGSNGLAMVFPLQEQIPIQTPQQMSERIYMYTYSERLMGSNGLAMVFPLQE--Q-IPIQTPHLI--IG 127 (269)
Q Consensus 53 ~l~~~~~~~~a~~~~~~~~V~E~vpE~l~~K~k~~l~~~l~~~~~~~~iiaSnTS~l~~p~~~--~-~~~~~p~R~--i~ 127 (269)
+.++..+++|.+..+| +|+.++|...+.+ +-+.+++-+.++++++|. |+|+-+ ++.+ + +.+.. .++ .+
T Consensus 207 g~~~~~~l~ell~~aD--vVil~vp~~~~t~--~li~~~~l~~mk~gaili-n~srg~-~vd~~aL~~aL~~-~~i~gag 279 (348)
T 2w2k_A 207 GAERVDSLEELARRSD--CVSVSVPYMKLTH--HLIDEAFFAAMKPGSRIV-NTARGP-VISQDALIAALKS-GKLLSAG 279 (348)
T ss_dssp TCEECSSHHHHHHHCS--EEEECCCCSGGGT--TCBCHHHHHHSCTTEEEE-ECSCGG-GBCHHHHHHHHHT-TSEEEEE
T ss_pred CcEEeCCHHHHhccCC--EEEEeCCCChHHH--HHhhHHHHhcCCCCCEEE-ECCCCc-hhCHHHHHHHHHh-CCceEEE
Confidence 4667778999998777 9999999988877 766666777889999885 666542 2322 2 23332 344 67
Q ss_pred eeccCCC-----CCCcEEEEeCCCCCCH
Q psy9059 128 MHYFSPV-----DKMQLLEIITTEQTSQ 150 (269)
Q Consensus 128 ~HffnP~-----~~~~lVEiv~~~~Ts~ 150 (269)
+|.|.|- .+..+..++-+|.++.
T Consensus 280 lDv~~~EP~~~~~L~~~~nviltPH~~~ 307 (348)
T 2w2k_A 280 LDVHEFEPQVSKELIEMKHVTLTTHIGG 307 (348)
T ss_dssp ESSCTTTTSCCHHHHTSSSEEECCSCTT
T ss_pred eccCCCCCCCCchhhcCCCEEEcCcCCC
Confidence 8999842 2444556666655543
No 85
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=93.18 E-value=0.068 Score=45.26 Aligned_cols=100 Identities=3% Similarity=-0.054 Sum_probs=63.6
Q ss_pred HhcCCCCceEEeecCCCcCCCchhHHHHHHHhcCCCCcEEecCCCCCc-cc-------c----cc-cC-CCCCCCeEEE-
Q psy9059 63 RLMGSNGLAMVFPLQEQIPIQTPQQMSERIYMYTYSERLMGSNGLAMV-FP-------L----QE-QI-PIQTPHLIIG- 127 (269)
Q Consensus 63 a~~~~~~~~V~E~vpE~l~~K~k~~l~~~l~~~~~~~~iiaSnTS~l~-~p-------~----~~-~~-~~~~p~R~i~- 127 (269)
++.+ ||+|+.++| ...- +++++++.+.++ ++++.+.+++++ .. . .+ ++ ... ..+++.
T Consensus 54 ~~~~--aD~vi~av~--~~~~--~~v~~~l~~~~~-~~~vi~~~~g~~~~~~~~l~~~~~~~~~~~l~~~l~-~~~vv~~ 125 (209)
T 2raf_A 54 ATTL--GEIVIMAVP--YPAL--AALAKQYATQLK-GKIVVDITNPLNFDTWDDLVVPADSSAAQELQQQLP-DSQVLKA 125 (209)
T ss_dssp CSSC--CSEEEECSC--HHHH--HHHHHHTHHHHT-TSEEEECCCCBCTTTSSSBSSCTTCCHHHHHHHHCT-TSEEEEC
T ss_pred Hhcc--CCEEEEcCC--cHHH--HHHHHHHHHhcC-CCEEEEECCCCCccccccccCCCCCcHHHHHHHHCC-CCcEEEe
Confidence 4444 559999999 3334 678888888888 899988888762 00 1 12 22 222 357777
Q ss_pred eeccC-CCCC-------CcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEEec
Q psy9059 128 MHYFS-PVDK-------MQLLEIITTEQTSQDTAASAVAVGLKQGKVVITVKD 172 (269)
Q Consensus 128 ~Hffn-P~~~-------~~lVEiv~~~~Ts~e~~~~~~~~~~~lGk~pv~vkd 172 (269)
+|+.. |... .+..-++.+ ++++..+.+.++++.+|..++.+.+
T Consensus 126 ~~~~~~p~~~~~~~~g~~~~~~~~~g--~~~~~~~~v~~ll~~~G~~~~~~~~ 176 (209)
T 2raf_A 126 FNTTFAATLQSGQVNGKEPTTVLVAG--NDDSAKQRFTRALADSPLEVKDAGK 176 (209)
T ss_dssp STTSCHHHHHHSEETTTEECEEEEEE--SCHHHHHHHHHHTTTSSCEEEEEES
T ss_pred eecccHhhccccccCCCCCceeEEcC--CCHHHHHHHHHHHHHcCCceEeCCC
Confidence 55532 2111 122222333 4678999999999999999988865
No 86
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=92.93 E-value=0.097 Score=48.46 Aligned_cols=51 Identities=6% Similarity=0.020 Sum_probs=43.0
Q ss_pred CeE-EecCHHHHhcCCCCceEEeecCCCcCCCchhHHHHHHHhcCCCCcEEecCCCCC
Q psy9059 53 GIT-YLYTYSERLMGSNGLAMVFPLQEQIPIQTPQQMSERIYMYTYSERLMGSNGLAM 109 (269)
Q Consensus 53 ~l~-~~~~~~~a~~~~~~~~V~E~vpE~l~~K~k~~l~~~l~~~~~~~~iiaSnTS~l 109 (269)
++. ++++++|++.++| +|+.+||... + ++++++|.++++++++|.|++++.
T Consensus 68 ~~~~~~~~~~~a~~~aD--~Vilav~~~~--~--~~v~~~l~~~l~~~~ivv~~~~~~ 119 (404)
T 3c7a_A 68 RPKVITKDPEIAISGAD--VVILTVPAFA--H--EGYFQAMAPYVQDSALIVGLPSQA 119 (404)
T ss_dssp CCSEEESCHHHHHTTCS--EEEECSCGGG--H--HHHHHHHTTTCCTTCEEEETTCCT
T ss_pred cceEEeCCHHHHhCCCC--EEEEeCchHH--H--HHHHHHHHhhCCCCcEEEEcCCCc
Confidence 454 7889999998766 9999999954 6 899999999999999999966554
No 87
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=92.83 E-value=0.022 Score=52.02 Aligned_cols=90 Identities=9% Similarity=0.027 Sum_probs=57.9
Q ss_pred CeEEecCHHHHhcCCCCceEEeecCCCcCCCchhHHHHHHHhcCCCCcEEecCCCCCcccccc--c-CCCC-CCCeEEEe
Q psy9059 53 GITYLYTYSERLMGSNGLAMVFPLQEQIPIQTPQQMSERIYMYTYSERLMGSNGLAMVFPLQE--Q-IPIQ-TPHLIIGM 128 (269)
Q Consensus 53 ~l~~~~~~~~a~~~~~~~~V~E~vpE~l~~K~k~~l~~~l~~~~~~~~iiaSnTS~l~~p~~~--~-~~~~-~p~R~i~~ 128 (269)
++++. +++|+++++| +|+.++|...+.+ +-+.+++.+.+++++++. |+|+-+ +++. + +.+. ..-+..++
T Consensus 198 g~~~~-~l~e~l~~aD--vVi~~vp~~~~t~--~~i~~~~~~~mk~gailI-n~srg~-~v~~~aL~~aL~~~~i~ga~l 270 (330)
T 2gcg_A 198 QAEFV-STPELAAQSD--FIVVACSLTPATE--GLCNKDFFQKMKETAVFI-NISRGD-VVNQDDLYQALASGKIAAAGL 270 (330)
T ss_dssp TCEEC-CHHHHHHHCS--EEEECCCCCTTTT--TCBSHHHHHHSCTTCEEE-ECSCGG-GBCHHHHHHHHHHTSSSEEEE
T ss_pred CceeC-CHHHHHhhCC--EEEEeCCCChHHH--HhhCHHHHhcCCCCcEEE-ECCCCc-ccCHHHHHHHHHcCCccEEEe
Confidence 45666 8999998776 9999999988777 666566777889999885 555432 2222 2 2222 22334788
Q ss_pred eccCCCC------CCcEEEEeCCCCCC
Q psy9059 129 HYFSPVD------KMQLLEIITTEQTS 149 (269)
Q Consensus 129 HffnP~~------~~~lVEiv~~~~Ts 149 (269)
|+|+|.. +..+-+|+-+|.++
T Consensus 271 Dv~~~epl~~~~~l~~~~nvi~tPh~~ 297 (330)
T 2gcg_A 271 DVTSPEPLPTNHPLLTLKNCVILPHIG 297 (330)
T ss_dssp SCCSSSSCCTTCGGGGCTTEEECCSCT
T ss_pred CCCCCCCCCCCChhhcCCCEEECCCCC
Confidence 9987753 34444566555443
No 88
>2b0j_A 5,10-methenyltetrahydromethanopterin hydrogenase; rossmann fold, helix bundle, oxidoreductase; 1.75A {Methanocaldococcus jannaschii} SCOP: a.100.1.11 c.2.1.6 PDB: 3f47_A* 3daf_A* 3dag_A* 3f46_A* 3h65_A*
Probab=92.81 E-value=2.7 Score=38.41 Aligned_cols=123 Identities=9% Similarity=0.006 Sum_probs=83.7
Q ss_pred cccccCCCC--------CCCcCeEEecCHHHHhcCCCCceEEeecCCCcCCCchhHHHHHHHhcCCCCcEEecCCCCCcc
Q psy9059 40 LCTTVPLVS--------TSHTGITYLYTYSERLMGSNGLAMVFPLQEQIPIQTPQQMSERIYMYTYSERLMGSNGLAMVF 111 (269)
Q Consensus 40 ~~~~~~~~~--------~~~~~l~~~~~~~~a~~~~~~~~V~E~vpE~l~~K~k~~l~~~l~~~~~~~~iiaSnTS~l~~ 111 (269)
..-++|-|+ -...++..+++-.||+++++ +++==-|. -... -++.++|-.++++++||+.. -+.|
T Consensus 107 ~a~~~pkppk~~ih~~~vEdaGVkVtsDD~EAvk~AE--i~IlftPf-G~~t--~~Iakkii~~lpEgAII~nT-CTip- 179 (358)
T 2b0j_A 107 KAKELPKPPKACIHLVHPEDVGLKVTSDDREAVEGAD--IVITWLPK-GNKQ--PDIIKKFADAIPEGAIVTHA-CTIP- 179 (358)
T ss_dssp HHHTSCCTTTEEEESSCGGGGTCEEESCHHHHHTTCS--EEEECCTT-CTTH--HHHHHHHGGGSCTTCEEEEC-SSSC-
T ss_pred HHhhCCCCCccceeeccHHHcCcEeecchHHHhcCCC--EEEEecCC-CCCc--HHHHHHHHhhCcCCCEEecc-cCCC-
Confidence 334556666 11344556689999998877 88888887 3334 78999999999999999853 3332
Q ss_pred cccc---cCCCCCC-CeEEEeeccCCCCCCcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEE
Q psy9059 112 PLQE---QIPIQTP-HLIIGMHYFSPVDKMQLLEIITTEQTSQDTAASAVAVGLKQGKVVITV 170 (269)
Q Consensus 112 p~~~---~~~~~~p-~R~i~~HffnP~~~~~lVEiv~~~~Ts~e~~~~~~~~~~~lGk~pv~v 170 (269)
|+-. .+.+.|. -.+..+||-.=|..- =-......-.+++.+++..+++++.|+.++.+
T Consensus 180 p~~ly~~le~l~R~DvgIsS~HPaaVPgt~-Gq~~~g~~yAtEEqIeklveLaksa~k~ay~v 241 (358)
T 2b0j_A 180 TTKFAKIFKDLGREDLNITSYHPGCVPEMK-GQVYIAEGYASEEAVNKLYEIGKIARGKAFKM 241 (358)
T ss_dssp HHHHHHHHHHTTCTTSEEEECBCSSCTTTC-CCEEEEESSSCHHHHHHHHHHHHHHHSCEEEE
T ss_pred HHHHHHHHHHhCcccCCeeccCCCCCCCCC-CccccccccCCHHHHHHHHHHHHHhCCCeEec
Confidence 3222 1456655 367777876544331 11223334568899999999999999999988
No 89
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=92.68 E-value=0.1 Score=50.45 Aligned_cols=145 Identities=10% Similarity=0.126 Sum_probs=89.8
Q ss_pred CeEEecCHHHHhcC-CCCceEEeecCCCcCCCchhHHHHHHHhcCCCCcEEecCCCCCccccc--cc-CCC-CCCCeEEE
Q psy9059 53 GITYLYTYSERLMG-SNGLAMVFPLQEQIPIQTPQQMSERIYMYTYSERLMGSNGLAMVFPLQ--EQ-IPI-QTPHLIIG 127 (269)
Q Consensus 53 ~l~~~~~~~~a~~~-~~~~~V~E~vpE~l~~K~k~~l~~~l~~~~~~~~iiaSnTS~l~~p~~--~~-~~~-~~p~R~i~ 127 (269)
+++.+.|++|+++. .++|+|+-+||....++ +++++|.++++++.||...+++. |.+ .. ..+ .+--+++.
T Consensus 52 ~i~~~~s~~e~v~~l~~aDvVil~Vp~~~~v~---~vl~~l~~~L~~g~iIId~st~~--~~~t~~~~~~l~~~Gi~fvd 126 (484)
T 4gwg_A 52 KVVGAQSLKEMVSKLKKPRRIILLVKAGQAVD---DFIEKLVPLLDTGDIIIDGGNSE--YRDTTRRCRDLKAKGILFVG 126 (484)
T ss_dssp SCEECSSHHHHHHTBCSSCEEEECSCSSHHHH---HHHHHHGGGCCTTCEEEECSCCC--HHHHHHHHHHHHHTTCEEEE
T ss_pred ceeccCCHHHHHhhccCCCEEEEecCChHHHH---HHHHHHHHhcCCCCEEEEcCCCC--chHHHHHHHHHHhhcccccc
Confidence 57778999999874 13459999999865554 57789999998877776655554 322 11 111 12234554
Q ss_pred eeccCCCC---CCcEEEEeCCCCCCHHHHHHHHHHHHhCCcEE-------EEEec-cCchh----HHHH---HHHHHHHH
Q psy9059 128 MHYFSPVD---KMQLLEIITTEQTSQDTAASAVAVGLKQGKVV-------ITVKD-GPGFY----TTRI---LSTMLSEA 189 (269)
Q Consensus 128 ~HffnP~~---~~~lVEiv~~~~Ts~e~~~~~~~~~~~lGk~p-------v~vkd-~pGfI----~nRl---l~al~~EA 189 (269)
+--...+. .-+ =++.| .++++++++..+++.+|..+ +.+.+ ..|.. -|-+ ....++|+
T Consensus 127 ~pVsGg~~gA~~G~--~im~G--G~~ea~~~v~pll~~ig~~v~~~~~~~~~~G~~Gag~~vKmv~N~i~~~~m~~iaEa 202 (484)
T 4gwg_A 127 SGVSGGEEGARYGP--SLMPG--GNKEAWPHIKTIFQGIAAKVGTGEPCCDWVGDEGAGHFVKMVHNGIEYGDMQLICEA 202 (484)
T ss_dssp EEEESHHHHHHHCC--EEEEE--ECGGGHHHHHHHHHHHSCBCTTSCBSBCCCEETTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCccCCHHHHhcCC--eeecC--CCHHHHHHHHHHHHHhcCcccCCCceEEEECCccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 31111000 011 13333 25788999999999998776 55532 23332 2332 35578999
Q ss_pred HHHHHc--CCCHHHHHHHH
Q psy9059 190 MRILQE--GTSPKDLDRLT 206 (269)
Q Consensus 190 ~~lv~e--Gis~edID~a~ 206 (269)
+.+.+. |++++++-.++
T Consensus 203 ~~l~~~~~Gld~~~l~~v~ 221 (484)
T 4gwg_A 203 YHLMKDVLGMAQDEMAQAF 221 (484)
T ss_dssp HHHHHHTSCCCHHHHHHHH
T ss_pred HHHHHHhcCCCHHHHHHHH
Confidence 999886 77998887765
No 90
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=91.96 E-value=0.025 Score=51.81 Aligned_cols=89 Identities=11% Similarity=0.097 Sum_probs=56.8
Q ss_pred eEEecCHHHHhcCCCCceEEeecCCCcCCCchhHHHHHHHhcCCCCcEEecCCCCCcccccc--c-CCCC-CCCeEEEee
Q psy9059 54 ITYLYTYSERLMGSNGLAMVFPLQEQIPIQTPQQMSERIYMYTYSERLMGSNGLAMVFPLQE--Q-IPIQ-TPHLIIGMH 129 (269)
Q Consensus 54 l~~~~~~~~a~~~~~~~~V~E~vpE~l~~K~k~~l~~~l~~~~~~~~iiaSnTS~l~~p~~~--~-~~~~-~p~R~i~~H 129 (269)
+++ .++++++.++| +|+.++|...+.+ +-+.+++.+.++++++| .|+|.-. ++++ + ..+. .+-.-.++|
T Consensus 193 ~~~-~~l~~~l~~aD--vVil~vp~~~~t~--~~i~~~~~~~mk~~ail-In~srg~-~v~~~aL~~aL~~~~i~ga~lD 265 (334)
T 2dbq_A 193 AEF-KPLEDLLRESD--FVVLAVPLTRETY--HLINEERLKLMKKTAIL-INIARGK-VVDTNALVKALKEGWIAGAGLD 265 (334)
T ss_dssp CEE-CCHHHHHHHCS--EEEECCCCCTTTT--TCBCHHHHHHSCTTCEE-EECSCGG-GBCHHHHHHHHHHTSSSEEEES
T ss_pred ccc-CCHHHHHhhCC--EEEECCCCChHHH--HhhCHHHHhcCCCCcEE-EECCCCc-ccCHHHHHHHHHhCCeeEEEec
Confidence 455 48999998776 9999999998887 66656777788999988 4555442 3442 2 2222 222337799
Q ss_pred ccC--CC---CCCcEEEEeCCCCCC
Q psy9059 130 YFS--PV---DKMQLLEIITTEQTS 149 (269)
Q Consensus 130 ffn--P~---~~~~lVEiv~~~~Ts 149 (269)
+|+ |+ .+..+..|+-+|.++
T Consensus 266 v~~~EP~~~~~L~~~~~vi~tPh~~ 290 (334)
T 2dbq_A 266 VFEEEPYYNEELFKLDNVVLTPHIG 290 (334)
T ss_dssp CCSSSSCCCHHHHHCTTEEECSSCT
T ss_pred CCCCCCCCCchhhcCCCEEECCccC
Confidence 998 32 233444566555443
No 91
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=91.22 E-value=0.075 Score=48.82 Aligned_cols=90 Identities=12% Similarity=0.034 Sum_probs=57.0
Q ss_pred eEEecCHHHHhcCCCCceEEeecCCCcCCCchhHHHHHHHhcCCCCcEEecCCCCCcccccc--c-CCCC-CCCeEEEee
Q psy9059 54 ITYLYTYSERLMGSNGLAMVFPLQEQIPIQTPQQMSERIYMYTYSERLMGSNGLAMVFPLQE--Q-IPIQ-TPHLIIGMH 129 (269)
Q Consensus 54 l~~~~~~~~a~~~~~~~~V~E~vpE~l~~K~k~~l~~~l~~~~~~~~iiaSnTS~l~~p~~~--~-~~~~-~p~R~i~~H 129 (269)
..+..+++|+++.+| +|+.++|...+.+ +-+-+++-+.++++++|. |+|.-. ++.. + +.+. ..-+..+++
T Consensus 203 ~~~~~~l~ell~~aD--vVil~vP~~~~t~--~li~~~~l~~mk~gailI-n~srG~-~vd~~aL~~aL~~g~i~ga~lD 276 (333)
T 3ba1_A 203 YTYYGSVVELASNSD--ILVVACPLTPETT--HIINREVIDALGPKGVLI-NIGRGP-HVDEPELVSALVEGRLGGAGLD 276 (333)
T ss_dssp SEEESCHHHHHHTCS--EEEECSCCCGGGT--TCBCHHHHHHHCTTCEEE-ECSCGG-GBCHHHHHHHHHHTSSCEEEES
T ss_pred ceecCCHHHHHhcCC--EEEEecCCChHHH--HHhhHHHHhcCCCCCEEE-ECCCCc-hhCHHHHHHHHHcCCCeEEEEe
Confidence 456679999998877 9999999877666 544455556678999884 555431 3322 2 3332 334668889
Q ss_pred ccC--C---CCCCcEEEEeCCCCCC
Q psy9059 130 YFS--P---VDKMQLLEIITTEQTS 149 (269)
Q Consensus 130 ffn--P---~~~~~lVEiv~~~~Ts 149 (269)
+|. | ..+..+-.++-+|.++
T Consensus 277 v~~~EP~~~~~L~~~~nviltPH~~ 301 (333)
T 3ba1_A 277 VFEREPEVPEKLFGLENVVLLPHVG 301 (333)
T ss_dssp CCTTTTCCCGGGGGCTTEEECSSCT
T ss_pred cCCCCCCCcchhhcCCCEEECCcCC
Confidence 887 4 2244445566555443
No 92
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=91.20 E-value=0.12 Score=47.35 Aligned_cols=89 Identities=16% Similarity=0.092 Sum_probs=58.1
Q ss_pred eEEecCHHHHhcCCCCceEEeecCCCcCCCchhHHHHHHHhcCCCCcEEecCCCCCcccccc--c-CCCC-CCCeEEEee
Q psy9059 54 ITYLYTYSERLMGSNGLAMVFPLQEQIPIQTPQQMSERIYMYTYSERLMGSNGLAMVFPLQE--Q-IPIQ-TPHLIIGMH 129 (269)
Q Consensus 54 l~~~~~~~~a~~~~~~~~V~E~vpE~l~~K~k~~l~~~l~~~~~~~~iiaSnTS~l~~p~~~--~-~~~~-~p~R~i~~H 129 (269)
.++. +++|+++.+| +|+.++|...+.+ +-+.+++.+.++++ +| .|+|.-. .++. + ..+. ..-+..++|
T Consensus 189 ~~~~-~l~e~l~~aD--iVil~vp~~~~t~--~~i~~~~~~~mk~g-il-in~srg~-~vd~~aL~~aL~~~~i~gaglD 260 (333)
T 2d0i_A 189 ARYM-DIDELLEKSD--IVILALPLTRDTY--HIINEERVKKLEGK-YL-VNIGRGA-LVDEKAVTEAIKQGKLKGYATD 260 (333)
T ss_dssp EEEC-CHHHHHHHCS--EEEECCCCCTTTT--TSBCHHHHHHTBTC-EE-EECSCGG-GBCHHHHHHHHHTTCBCEEEES
T ss_pred ceec-CHHHHHhhCC--EEEEcCCCChHHH--HHhCHHHHhhCCCC-EE-EECCCCc-ccCHHHHHHHHHcCCceEEEec
Confidence 5554 8999997766 9999999998877 76666666677888 55 5665542 3332 1 2332 234558999
Q ss_pred ccC--CCC---CCcEE-EEeCCCCCCH
Q psy9059 130 YFS--PVD---KMQLL-EIITTEQTSQ 150 (269)
Q Consensus 130 ffn--P~~---~~~lV-Eiv~~~~Ts~ 150 (269)
+|+ |.. +..+. .++-+|.++.
T Consensus 261 v~~~EP~~~~~L~~~~~nviltPh~~~ 287 (333)
T 2d0i_A 261 VFEKEPVREHELFKYEWETVLTPHYAG 287 (333)
T ss_dssp CCSSSSCSCCGGGGCTTTEEECCSCTT
T ss_pred CCCCCCCCCchHHcCCCCEEEcCccCC
Confidence 998 643 55555 6776665543
No 93
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=90.57 E-value=0.88 Score=41.24 Aligned_cols=136 Identities=13% Similarity=0.092 Sum_probs=84.0
Q ss_pred cCeEEecCHHHHhcCCCCceEEeecCCCcCCCchhHHHHH----HHhcCCC-CcEEecCCCCCccccccc----C--CCC
Q psy9059 52 TGITYLYTYSERLMGSNGLAMVFPLQEQIPIQTPQQMSER----IYMYTYS-ERLMGSNGLAMVFPLQEQ----I--PIQ 120 (269)
Q Consensus 52 ~~l~~~~~~~~a~~~~~~~~V~E~vpE~l~~K~k~~l~~~----l~~~~~~-~~iiaSnTS~l~~p~~~~----~--~~~ 120 (269)
.+++.+++++|++.++| +|+.+||. ... .+++.+ |..++++ +++|.|.++++. .... + ...
T Consensus 71 ~~~~~~~~~~~~~~~aD--vVilav~~--~~~--~~v~~~~~~gl~~~l~~~~~ivv~~~~gi~--~~~~~~~~~~l~~~ 142 (366)
T 1evy_A 71 SNITFTSDVEKAYNGAE--IILFVIPT--QFL--RGFFEKSGGNLIAYAKEKQVPVLVCTKGIE--RSTLKFPAEIIGEF 142 (366)
T ss_dssp TTEEEESCHHHHHTTCS--SEEECCCH--HHH--HHHHHHHCHHHHHHHHHHTCCEEECCCSCC--TTTCCCHHHHHTTT
T ss_pred cceeeeCCHHHHHcCCC--EEEECCCh--HHH--HHHHHHhHHHHHHhcCccCCEEEEECCcCC--CccccCHHHHHHHH
Confidence 36788899999997766 99999997 445 788888 9888888 888888877762 2211 0 001
Q ss_pred CCC-eEEEeeccCCCCC------C-cEEEEeCCCCCCHHHHHHHHHHHHhC--CcEEEEEeccCch--------------
Q psy9059 121 TPH-LIIGMHYFSPVDK------M-QLLEIITTEQTSQDTAASAVAVGLKQ--GKVVITVKDGPGF-------------- 176 (269)
Q Consensus 121 ~p~-R~i~~HffnP~~~------~-~lVEiv~~~~Ts~e~~~~~~~~~~~l--Gk~pv~vkd~pGf-------------- 176 (269)
.+. .+... ..|... . .++.+. ..+++..+.+..++... |..+....|..+.
T Consensus 143 ~~~~~~~v~--~gp~~~~~~~~g~~~~~~~~---~~~~~~~~~v~~ll~~~g~g~~~~~~~di~~~~~~k~~~n~~~~~~ 217 (366)
T 1evy_A 143 LPSPLLSVL--AGPSFAIEVATGVFTCVSIA---SADINVARRLQRIMSTGDRSFVCWATTDTVGCEVASAVKNVLAIGS 217 (366)
T ss_dssp SCGGGEEEE--ESSCCHHHHHTTCCEEEEEE---CSSHHHHHHHHHHHSCTTSSEEEEEESCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcEEEE--eCCChHHHHHhCCceEEEEe---cCCHHHHHHHHHHhcCCCCeEEEEEcCCchHHHHHHHHHhHHHHHH
Confidence 121 12211 223221 1 122322 23678889999999988 7766555553321
Q ss_pred --------hHH---HHHHHHHHHHHHHHH-cCCCHH
Q psy9059 177 --------YTT---RILSTMLSEAMRILQ-EGTSPK 200 (269)
Q Consensus 177 --------I~n---Rll~al~~EA~~lv~-eGis~e 200 (269)
.-| .+....++|++.+.+ .|++++
T Consensus 218 ~~~~~~~~~~n~~~~~~~~~~~E~~~la~a~Gi~~~ 253 (366)
T 1evy_A 218 GVANGLGMGLNARAALIMRGLLEIRDLTAALGGDGS 253 (366)
T ss_dssp HHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTCCCT
T ss_pred HHHhhccCCccHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 112 345577889888865 788443
No 94
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=90.22 E-value=0.22 Score=48.61 Aligned_cols=100 Identities=10% Similarity=0.099 Sum_probs=73.9
Q ss_pred cCHHHHhcCCCCceEEeecCCCcCCCchhHHHHHHHhcCCCCcEEecCCCCCcccccccC----CCCCCCeEEEeeccCC
Q psy9059 58 YTYSERLMGSNGLAMVFPLQEQIPIQTPQQMSERIYMYTYSERLMGSNGLAMVFPLQEQI----PIQTPHLIIGMHYFSP 133 (269)
Q Consensus 58 ~~~~~a~~~~~~~~V~E~vpE~l~~K~k~~l~~~l~~~~~~~~iiaSnTS~l~~p~~~~~----~~~~p~R~i~~HffnP 133 (269)
.|++|++.+|| +|+=++|-. .- .+++.+|.++++++++| |-.+|+ ++..+. .....-+++-+||=.|
T Consensus 113 ~s~aEAa~~AD--VVILaVP~~--~~--~eVl~eI~p~LK~GaIL-s~AaGf--~I~~le~~~i~~p~dv~VVrVmPNtP 183 (525)
T 3fr7_A 113 GDIWETVSGSD--LVLLLISDA--AQ--ADNYEKIFSHMKPNSIL-GLSHGF--LLGHLQSAGLDFPKNISVIAVCPKGM 183 (525)
T ss_dssp EEHHHHHHHCS--EEEECSCHH--HH--HHHHHHHHHHSCTTCEE-EESSSH--HHHHHHHTTCCCCTTSEEEEEEESSC
T ss_pred CCHHHHHhcCC--EEEECCChH--HH--HHHHHHHHHhcCCCCeE-EEeCCC--CHHHHhhhcccCCCCCcEEEEecCCC
Confidence 58999998877 999999873 23 46899999999999997 777777 444321 2333348999999888
Q ss_pred CCC---------------Cc-EEEEeCCCCCCHHHHHHHHHHHHhCCcEEE
Q psy9059 134 VDK---------------MQ-LLEIITTEQTSQDTAASAVAVGLKQGKVVI 168 (269)
Q Consensus 134 ~~~---------------~~-lVEiv~~~~Ts~e~~~~~~~~~~~lGk~pv 168 (269)
... ++ ++-+ +...+.+..+.+.+++..+|...+
T Consensus 184 g~~VR~~y~~G~~~~g~Gv~~liAv--~qd~tgea~e~alala~aiG~~~v 232 (525)
T 3fr7_A 184 GPSVRRLYVQGKEINGAGINSSFAV--HQDVDGRATDVALGWSVALGSPFT 232 (525)
T ss_dssp HHHHHHHHHHHTTSTTCSCCEEEEE--EECSSSCHHHHHHHHHHHTTCSEE
T ss_pred chhHHHHHhcccccccCCccEEEEc--CCCCCHHHHHHHHHHHHHCCCCee
Confidence 764 55 4333 334566788999999999998754
No 95
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=89.98 E-value=0.2 Score=44.97 Aligned_cols=145 Identities=13% Similarity=0.132 Sum_probs=91.2
Q ss_pred cCeEEecCHHHHhcCCCCceEEeecCCCcCCCchhHHHHHHHhcCCCCcE-EecCCCCCcccccc-c-CCC-CCCCeEEE
Q psy9059 52 TGITYLYTYSERLMGSNGLAMVFPLQEQIPIQTPQQMSERIYMYTYSERL-MGSNGLAMVFPLQE-Q-IPI-QTPHLIIG 127 (269)
Q Consensus 52 ~~l~~~~~~~~a~~~~~~~~V~E~vpE~l~~K~k~~l~~~l~~~~~~~~i-iaSnTS~l~~p~~~-~-~~~-~~p~R~i~ 127 (269)
.+.+.++|++|+++.+| .|+=++|..-..+ .-+...+.....++.| |-.||++. ..+. + +.+ .+ +
T Consensus 47 ~G~~~~~s~~e~~~~~d--vvi~~l~~~~~~~--~v~~~~~~~~~~~~~iiid~sT~~p--~~~~~~~~~~~~~-----g 115 (297)
T 4gbj_A 47 LGATVVENAIDAITPGG--IVFSVLADDAAVE--ELFSMELVEKLGKDGVHVSMSTISP--ETSRQLAQVHEWY-----G 115 (297)
T ss_dssp TTCEECSSGGGGCCTTC--EEEECCSSHHHHH--HHSCHHHHHHHCTTCEEEECSCCCH--HHHHHHHHHHHHT-----T
T ss_pred cCCeEeCCHHHHHhcCC--ceeeeccchhhHH--HHHHHHHHhhcCCCeEEEECCCCCh--HHHHHHHHHHHhc-----C
Confidence 45688999999998877 9999999866665 5555666666666554 44555542 1222 2 111 12 2
Q ss_pred eecc-CCCCCC-------cEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEEeccCch-----hHHHHH----HHHHHHHH
Q psy9059 128 MHYF-SPVDKM-------QLLEIITTEQTSQDTAASAVAVGLKQGKVVITVKDGPGF-----YTTRIL----STMLSEAM 190 (269)
Q Consensus 128 ~Hff-nP~~~~-------~lVEiv~~~~Ts~e~~~~~~~~~~~lGk~pv~vkd~pGf-----I~nRll----~al~~EA~ 190 (269)
.||. .|+.-. .+. ++.+ -+++.++++..+++.+|+..+++.+.+|- ++|-++ ...+.|++
T Consensus 116 ~~~ldapVsGg~~~a~~g~l~-im~g--G~~~~~~~~~~~l~~~g~~i~~~g~~~G~g~~~Kl~~N~~~~~~~~~~aEa~ 192 (297)
T 4gbj_A 116 AHYVGAPIFARPEAVRAKVGN-ICLS--GNAGAKERIKPIVENFVKGVFDFGDDPGAANVIKLAGNFMIACSLEMMGEAF 192 (297)
T ss_dssp CEEEECCEECCHHHHHHTCCE-EEEE--ECHHHHHHHHHHHHTTCSEEEECCSCTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CceecCCcCCCccccccccce-eecc--cchhHHHHHHHHHHHhhCCeEEecCCccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3332 232211 122 2222 36789999999999999998888655542 233333 45668998
Q ss_pred HHHH-cCCCHHHHHHHHH-hcC
Q psy9059 191 RILQ-EGTSPKDLDRLTK-QFG 210 (269)
Q Consensus 191 ~lv~-eGis~edID~a~~-g~G 210 (269)
.+.+ .|++++.+=.++. +.+
T Consensus 193 ~la~~~Gld~~~~~~~l~~~~~ 214 (297)
T 4gbj_A 193 TMAEKNGISRQSIYEMLTSTLF 214 (297)
T ss_dssp HHHHHTTCCHHHHHHHHHTTTT
T ss_pred HHHHHcCCCHHHHHHHHHhhcc
Confidence 8765 7889988877776 554
No 96
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=89.78 E-value=0.09 Score=47.60 Aligned_cols=69 Identities=17% Similarity=0.303 Sum_probs=47.0
Q ss_pred CcCeEEecCHHHHhcCCCCceEEee--------------cCCCcCCCchhHHHHHHHhcCCCCc--EEecCCCCCccccc
Q psy9059 51 HTGITYLYTYSERLMGSNGLAMVFP--------------LQEQIPIQTPQQMSERIYMYTYSER--LMGSNGLAMVFPLQ 114 (269)
Q Consensus 51 ~~~l~~~~~~~~a~~~~~~~~V~E~--------------vpE~l~~K~k~~l~~~l~~~~~~~~--iiaSnTS~l~~p~~ 114 (269)
..+++.+.++ +|++||| +|+++ +.++.+++ +++.++|.+++ |++ |+.||.... ++
T Consensus 53 ~~~i~~t~d~-~a~~~aD--~Vi~~ag~~~k~G~~r~dl~~~n~~i~--~~i~~~i~~~~-p~a~iiv~tNPv~~---~t 123 (308)
T 2d4a_B 53 DIRISGSNSY-EDMRGSD--IVLVTAGIGRKPGMTREQLLEANANTM--ADLAEKIKAYA-KDAIVVITTNPVDA---MT 123 (308)
T ss_dssp CCCEEEESCG-GGGTTCS--EEEECCSCCCCSSCCTHHHHHHHHHHH--HHHHHHHHHHC-TTCEEEECCSSHHH---HH
T ss_pred CeEEEECCCH-HHhCCCC--EEEEeCCCCCCCCCcHHHHHHHHHHHH--HHHHHHHHHHC-CCeEEEEeCCchHH---HH
Confidence 3567776787 7897777 99999 34455567 99999999998 676 677885543 22
Q ss_pred cc--CCCCC-CCeEEEe
Q psy9059 115 EQ--IPIQT-PHLIIGM 128 (269)
Q Consensus 115 ~~--~~~~~-p~R~i~~ 128 (269)
.+ ..... |.|++|+
T Consensus 124 ~~~~k~~~~p~~rviG~ 140 (308)
T 2d4a_B 124 YVMYKKTGFPRERVIGF 140 (308)
T ss_dssp HHHHHHHCCCGGGEEEC
T ss_pred HHHHHhcCCChhhEEEe
Confidence 21 11122 5688877
No 97
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=89.71 E-value=1.1 Score=39.61 Aligned_cols=142 Identities=10% Similarity=0.040 Sum_probs=83.4
Q ss_pred CeEEec--CHHHHhcCCCCceEEeecCCCcCCCchhHHHHHHHhcCCCCcEEecCCCCC---cc-ccccc-CCCC--CCC
Q psy9059 53 GITYLY--TYSERLMGSNGLAMVFPLQEQIPIQTPQQMSERIYMYTYSERLMGSNGLAM---VF-PLQEQ-IPIQ--TPH 123 (269)
Q Consensus 53 ~l~~~~--~~~~a~~~~~~~~V~E~vpE~l~~K~k~~l~~~l~~~~~~~~iiaSnTS~l---~~-p~~~~-~~~~--~p~ 123 (269)
+++..+ +++|++.++| +|+-++|.. .. .+++.+|.+ ++++++|.+.+.++ .. ....+ +... .+.
T Consensus 56 ~~~~~~~~~~~~~~~~~D--~vi~~v~~~--~~--~~v~~~i~~-l~~~~~vv~~~ng~~~~~~~~~~~l~~~~~~~~g~ 128 (335)
T 1txg_A 56 GVEIFWPEQLEKCLENAE--VVLLGVSTD--GV--LPVMSRILP-YLKDQYIVLISKGLIDFDNSVLTVPEAVWRLKHDL 128 (335)
T ss_dssp SEEEECGGGHHHHHTTCS--EEEECSCGG--GH--HHHHHHHTT-TCCSCEEEECCCSEEEETTEEEEHHHHHHTTSTTC
T ss_pred ceEEecHHhHHHHHhcCC--EEEEcCChH--HH--HHHHHHHhc-CCCCCEEEEEcCcCccCCCCcCccHHHHHHHhcCC
Confidence 456777 8999987766 999999986 45 789999998 88888777665443 10 11111 1111 121
Q ss_pred eEEEeeccCCCCCC-----cEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEEeccCch----------------------
Q psy9059 124 LIIGMHYFSPVDKM-----QLLEIITTEQTSQDTAASAVAVGLKQGKVVITVKDGPGF---------------------- 176 (269)
Q Consensus 124 R~i~~HffnP~~~~-----~lVEiv~~~~Ts~e~~~~~~~~~~~lGk~pv~vkd~pGf---------------------- 176 (269)
+........|.... ....++.+. .+++..+.+.++++..|..+....|..+.
T Consensus 129 ~~~~~~~~~p~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~ll~~~g~~~~~~~di~~~~~~k~~~N~~~~~~~~~~~~~~ 207 (335)
T 1txg_A 129 RERTVAITGPAIAREVAKRMPTTVVFSS-PSESSANKMKEIFETEYFGVEVTTDIIGTEITSALKNVYSIAIAWIRGYES 207 (335)
T ss_dssp GGGEEEEESSCCHHHHHTTCCEEEEEEC-SCHHHHHHHHHHHCBTTEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCcHHHHHccCCcEEEEEe-CCHHHHHHHHHHhCCCcEEEEecCchHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 00111123443321 001233333 35788899999999999877666553210
Q ss_pred h-----HH---HHHHHHHHHHHHHHH-cCCCHHHH
Q psy9059 177 Y-----TT---RILSTMLSEAMRILQ-EGTSPKDL 202 (269)
Q Consensus 177 I-----~n---Rll~al~~EA~~lv~-eGis~edI 202 (269)
. .| .+....++|+..+.+ .|++++++
T Consensus 208 ~~l~~~~n~~~~~~~~~~~E~~~la~~~G~~~~~~ 242 (335)
T 1txg_A 208 RKNVEMSNAKGVIATRAINEMAELIEILGGDRETA 242 (335)
T ss_dssp HHTCCCHHHHHHHHHHHHHHHHHHHHHHTSCGGGG
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcchh
Confidence 1 12 345677888887765 68855433
No 98
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=88.99 E-value=0.34 Score=43.59 Aligned_cols=145 Identities=13% Similarity=0.140 Sum_probs=90.2
Q ss_pred CeEEecCHHHHhcCCCCceEEeecCCCcCCCchhHHHHH---HHhcCCC-CcEEecCCCCCcccccc-c-CCCCCCCeEE
Q psy9059 53 GITYLYTYSERLMGSNGLAMVFPLQEQIPIQTPQQMSER---IYMYTYS-ERLMGSNGLAMVFPLQE-Q-IPIQTPHLII 126 (269)
Q Consensus 53 ~l~~~~~~~~a~~~~~~~~V~E~vpE~l~~K~k~~l~~~---l~~~~~~-~~iiaSnTS~l~~p~~~-~-~~~~~p~R~i 126 (269)
+.+.++|++|+++++| .|+=|+|..-.++ . ++.. +.+.+++ .++|-.+|++. ..+. + +.+...
T Consensus 46 Ga~~a~s~~e~~~~~d--vv~~~l~~~~~v~--~-V~~~~~g~~~~~~~g~iiId~sT~~p--~~~~~~a~~~~~~---- 114 (300)
T 3obb_A 46 GASAARSARDAVQGAD--VVISMLPASQHVE--G-LYLDDDGLLAHIAPGTLVLECSTIAP--TSARKIHAAARER---- 114 (300)
T ss_dssp TCEECSSHHHHHTTCS--EEEECCSCHHHHH--H-HHHSSSSSTTSCCC-CEEEECSCCCH--HHHHHHHHHHHTT----
T ss_pred CCEEcCCHHHHHhcCC--ceeecCCchHHHH--H-HHhchhhhhhcCCCCCEEEECCCCCH--HHHHHHHHHHHHc----
Confidence 4678899999998877 9999999876665 3 4332 3344444 45556666653 1222 2 122111
Q ss_pred Eeecc-CCCCCC-------cEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEEecc-Cch---hHHHHH----HHHHHHHH
Q psy9059 127 GMHYF-SPVDKM-------QLLEIITTEQTSQDTAASAVAVGLKQGKVVITVKDG-PGF---YTTRIL----STMLSEAM 190 (269)
Q Consensus 127 ~~Hff-nP~~~~-------~lVEiv~~~~Ts~e~~~~~~~~~~~lGk~pv~vkd~-pGf---I~nRll----~al~~EA~ 190 (269)
+.||. -|+.-- .|.=++.| +++++++++.+++.+|+..+++.+. .|. ++|-++ ...+.||+
T Consensus 115 G~~~lDaPVsGg~~~A~~G~L~imvGG---~~~~~~~~~p~l~~~g~~i~~~G~~G~g~~~Kl~~N~l~~~~~~a~aEa~ 191 (300)
T 3obb_A 115 GLAMLDAPVSGGTAGAAAGTLTFMVGG---DAEALEKARPLFEAMGRNIFHAGPDGAGQVAKVCNNQLLAVLMIGTAEAM 191 (300)
T ss_dssp TCEEEECCEESCHHHHHHTCEEEEEES---CHHHHHHHHHHHHHHEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEecCCCCCHHHHHhCCEEEEEeC---CHHHHHHHHHHHHHhCCCEEEeCCccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33443 233221 23434554 6799999999999999999888542 222 233332 34567888
Q ss_pred HHHH-cCCCHHHHHHHHH-hcCC
Q psy9059 191 RILQ-EGTSPKDLDRLTK-QFGF 211 (269)
Q Consensus 191 ~lv~-eGis~edID~a~~-g~G~ 211 (269)
.+.+ .|++++.+=.++. +.|.
T Consensus 192 ~la~~~Gld~~~~~~vl~~~~~~ 214 (300)
T 3obb_A 192 ALGVANGLEAKVLAEIMRRSSGG 214 (300)
T ss_dssp HHHHHTTCCHHHHHHHHHTSTTC
T ss_pred HHHHhcCCCHHHHHHHHHhCccc
Confidence 8865 7889998887776 5543
No 99
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=87.70 E-value=7 Score=36.97 Aligned_cols=145 Identities=8% Similarity=-0.032 Sum_probs=85.1
Q ss_pred CcCeEEecCHHHHhcCCCCceEEeecCCCcC--------CCchhHHHHHHHhcCCCCcEEecCCCCCcccccc-c-C---
Q psy9059 51 HTGITYLYTYSERLMGSNGLAMVFPLQEQIP--------IQTPQQMSERIYMYTYSERLMGSNGLAMVFPLQE-Q-I--- 117 (269)
Q Consensus 51 ~~~l~~~~~~~~a~~~~~~~~V~E~vpE~l~--------~K~k~~l~~~l~~~~~~~~iiaSnTS~l~~p~~~-~-~--- 117 (269)
.+++++++++ ++ ||.|+=|||-..+ ++.=.+..+.|.+++++++++- ..||.+.-.++ + .
T Consensus 72 ~g~l~~ttd~----~~--aDvvii~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~iVV-~~STV~pgtt~~v~~~i~ 144 (431)
T 3ojo_A 72 SGKLKVSTTP----EA--SDVFIIAVPTPNNDDQYRSCDISLVMRALDSILPFLKKGNTII-VESTIAPKTMDDFVKPVI 144 (431)
T ss_dssp TTCEEEESSC----CC--CSEEEECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCTTEEEE-ECSCCCTTHHHHTHHHHH
T ss_pred cCceEEeCch----hh--CCEEEEEeCCCccccccCCccHHHHHHHHHHHHHhCCCCCEEE-EecCCChhHHHHHHHHHH
Confidence 4789999874 34 5599999987553 2211344577888888887654 33444211111 2 1
Q ss_pred ---CCCCCCeEEEeeccCCCCCCcEE---------EEeCCCCCCHHHHHHHHHHHHhCCcEEEEEecc-Cc----hhHHH
Q psy9059 118 ---PIQTPHLIIGMHYFSPVDKMQLL---------EIITTEQTSQDTAASAVAVGLKQGKVVITVKDG-PG----FYTTR 180 (269)
Q Consensus 118 ---~~~~p~R~i~~HffnP~~~~~lV---------Eiv~~~~Ts~e~~~~~~~~~~~lGk~pv~vkd~-pG----fI~nR 180 (269)
+.....++-.+ ++|..+.+-- =||.|. +++..+++..+++.+++.++++.+. .| .+.|-
T Consensus 145 e~~g~~~~~d~~v~--~~Pe~~~~G~A~~~~~~p~~Iv~G~--~~~~~~~~~~ly~~~~~~~~~~~~~~~AE~~Kl~~N~ 220 (431)
T 3ojo_A 145 ENLGFTIGEDIYLV--HCPERVLPGKILEELVHNNRIIGGV--TKACIEAGKRVYRTFVQGEMIETDARTAEMSKLMENT 220 (431)
T ss_dssp HTTTCCBTTTEEEE--ECCCCCCTTSHHHHHHHSCEEEEES--SHHHHHHHHHHHTTTCCSCEEEEEHHHHHHHHHHHHH
T ss_pred HHcCCCcCCCeEEE--ECCCcCCCcchhhcccCCCEEEEeC--CHHHHHHHHHHHHHHhCCcEEeCCHHHHHHHHHHHHH
Confidence 11111223333 3564432210 134443 6899999999999999877776431 11 22333
Q ss_pred HH---HHHHHHHHHHHH-cCCCHHHHHHHH
Q psy9059 181 IL---STMLSEAMRILQ-EGTSPKDLDRLT 206 (269)
Q Consensus 181 ll---~al~~EA~~lv~-eGis~edID~a~ 206 (269)
++ .+++||+..+.+ -|++++++=.++
T Consensus 221 ~~a~~Ia~~nE~~~l~e~~GiD~~~v~~~~ 250 (431)
T 3ojo_A 221 YRDVNIALANELTKICNNLNINVLDVIEMA 250 (431)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 32 567899998876 688888877766
No 100
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=87.45 E-value=0.93 Score=42.61 Aligned_cols=62 Identities=8% Similarity=0.000 Sum_probs=51.1
Q ss_pred hhcccccCCCCCCCcCeEEecCHHHHhcCCCCceEEeecCCCcCCCchhHHHHHHHhcCCCCcEEecCCCCC
Q psy9059 38 YALCTTVPLVSTSHTGITYLYTYSERLMGSNGLAMVFPLQEQIPIQTPQQMSERIYMYTYSERLMGSNGLAM 109 (269)
Q Consensus 38 ~~~~~~~~~~~~~~~~l~~~~~~~~a~~~~~~~~V~E~vpE~l~~K~k~~l~~~l~~~~~~~~iiaSnTS~l 109 (269)
..+|.++.+|+ +|+++++++|+++++| +|+-+||= ..= +++++++..+.++++++-|-|=|+
T Consensus 93 ~~YLpgv~Lp~----~i~~t~dl~~al~~ad--~ii~avPs--~~~--r~~l~~l~~~~~~~~~iv~~~KGi 154 (391)
T 4fgw_A 93 VKYLPGITLPD----NLVANPDLIDSVKDVD--IIVFNIPH--QFL--PRICSQLKGHVDSHVRAISCLKGF 154 (391)
T ss_dssp TTTBTTCCCCS----SEEEESCHHHHHTTCS--EEEECSCG--GGH--HHHHHHHTTTSCTTCEEEECCCSC
T ss_pred cccCCCCcCCC----CcEEeCCHHHHHhcCC--EEEEECCh--hhh--HHHHHHhccccCCCceeEEecccc
Confidence 44566778876 7999999999998877 99999997 223 678999999999999998887666
No 101
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=84.77 E-value=1.3 Score=39.52 Aligned_cols=111 Identities=12% Similarity=0.016 Sum_probs=66.1
Q ss_pred CeEEecCHHHHhcCCCCceEEeecCCCcCCCchhHHHHHHHhcCCCCcEEecCCCCCcccccc-c-CCCCCCCeEEEe--
Q psy9059 53 GITYLYTYSERLMGSNGLAMVFPLQEQIPIQTPQQMSERIYMYTYSERLMGSNGLAMVFPLQE-Q-IPIQTPHLIIGM-- 128 (269)
Q Consensus 53 ~l~~~~~~~~a~~~~~~~~V~E~vpE~l~~K~k~~l~~~l~~~~~~~~iiaSnTS~l~~p~~~-~-~~~~~p~R~i~~-- 128 (269)
+++.+++.++ +.+ +|+|+.+||.. .- ++++++|..+++++++|.|.+.++ ...+ + +... +++++.
T Consensus 74 ~~~~~~~~~~-~~~--~D~vilavk~~--~~--~~~l~~l~~~l~~~~~iv~~~nGi--~~~~~l~~~~~--~~vl~g~~ 142 (318)
T 3hwr_A 74 KVSASSDPSA-VQG--ADLVLFCVKST--DT--QSAALAMKPALAKSALVLSLQNGV--ENADTLRSLLE--QEVAAAVV 142 (318)
T ss_dssp CCEEESCGGG-GTT--CSEEEECCCGG--GH--HHHHHHHTTTSCTTCEEEEECSSS--SHHHHHHHHCC--SEEEEEEE
T ss_pred eeeeeCCHHH-cCC--CCEEEEEcccc--cH--HHHHHHHHHhcCCCCEEEEeCCCC--CcHHHHHHHcC--CcEEEEEE
Confidence 4556677654 555 45999999986 33 688999999999999999999998 3322 2 2222 555532
Q ss_pred -e---ccCCCCCCcEEEE-----eCCCCCCHHHHHHHHHHHHhCCcEEEEEeccCchhHHH
Q psy9059 129 -H---YFSPVDKMQLLEI-----ITTEQTSQDTAASAVAVGLKQGKVVITVKDGPGFYTTR 180 (269)
Q Consensus 129 -H---ffnP~~~~~lVEi-----v~~~~Ts~e~~~~~~~~~~~lGk~pv~vkd~pGfI~nR 180 (269)
+ ...|-. ..|+ .-+. .+..+.+.+++...|..+....|.-+.....
T Consensus 143 ~~~a~~~gP~~---~~~~~~g~~~ig~---~~~~~~l~~~l~~~~~~~~~~~Di~~~~w~K 197 (318)
T 3hwr_A 143 YVATEMAGPGH---VRHHGRGELVIEP---TSHGANLAAIFAAAGVPVETSDNVRGALWAK 197 (318)
T ss_dssp EEEEEEEETTE---EEEEEEEEEEECC---CTTTHHHHHHHHHTTCCEEECSCHHHHHHHH
T ss_pred EEeEEEcCCeE---EEEcCCceEEEcC---CHHHHHHHHHHHhCCCCcEechHHHHHHHHH
Confidence 1 112321 1121 1122 2334566677777777665556654433333
No 102
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=84.40 E-value=2.4 Score=38.01 Aligned_cols=49 Identities=4% Similarity=-0.038 Sum_probs=37.0
Q ss_pred eEEecCHHHHhcCCCCceEEeecCCCcCCCchhHHHHHHHhcCCCCcEEecCCCCC
Q psy9059 54 ITYLYTYSERLMGSNGLAMVFPLQEQIPIQTPQQMSERIYMYTYSERLMGSNGLAM 109 (269)
Q Consensus 54 l~~~~~~~~a~~~~~~~~V~E~vpE~l~~K~k~~l~~~l~~~~~~~~iiaSnTS~l 109 (269)
++..++.++ +.++| +|+-|||.. + - .+++++|..+++++++|.|-+.++
T Consensus 59 ~~~~~~~~~-~~~~D--~Vilavk~~-~-~--~~~~~~l~~~l~~~~~iv~~~nGi 107 (335)
T 3ghy_A 59 VRATHDAAA-LGEQD--VVIVAVKAP-A-L--ESVAAGIAPLIGPGTCVVVAMNGV 107 (335)
T ss_dssp CEEESCHHH-HCCCS--EEEECCCHH-H-H--HHHHGGGSSSCCTTCEEEECCSSS
T ss_pred eeEECCHHH-cCCCC--EEEEeCCch-h-H--HHHHHHHHhhCCCCCEEEEECCCC
Confidence 456677776 55555 999999873 2 2 467788888889999999888885
No 103
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=82.52 E-value=16 Score=34.72 Aligned_cols=150 Identities=7% Similarity=-0.037 Sum_probs=82.1
Q ss_pred CcCeEEecCHHHHhcCCCCceEEeecCC------CcCCCchhHHHHHHHhcCC----CCcEEecCCCCCccccccc----
Q psy9059 51 HTGITYLYTYSERLMGSNGLAMVFPLQE------QIPIQTPQQMSERIYMYTY----SERLMGSNGLAMVFPLQEQ---- 116 (269)
Q Consensus 51 ~~~l~~~~~~~~a~~~~~~~~V~E~vpE------~l~~K~k~~l~~~l~~~~~----~~~iiaSnTS~l~~p~~~~---- 116 (269)
.|+|+|+++.++|+.++| .++=|||= +.|+.-=.+..+.|.+++. .+.|+--||.--. ...++
T Consensus 82 ~g~l~~tt~~~~ai~~ad--~~~I~VpTP~~~d~~~Dl~~v~~a~~~I~~~l~~~~~g~lVV~eSTVppG-tte~~~~~~ 158 (444)
T 3vtf_A 82 SGRLSFAESAEEAVAATD--ATFIAVGTPPAPDGSADLRYVEAAARAVGRGIRAKGRWHLVVVKSTVPPG-TTEGLVARA 158 (444)
T ss_dssp TTCEEECSSHHHHHHTSS--EEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHHHHCSCCEEEECSCCCTT-TTTTHHHHH
T ss_pred cCCeeEEcCHHHHHhcCC--ceEEEecCCCCCCCCCCcHHHHHHHHHHHHHHhhcCCCeEEEEeCCCCCc-hHHHHHHHH
Confidence 589999999999998877 88889862 3344311344566666653 3556665554211 11111
Q ss_pred -CCCCCCCeEEEeeccCCCCCCcE--E-------EEeCCCCCCHHHHHHHHHHHHhCCcEEEEEe----ccCchhHHHH-
Q psy9059 117 -IPIQTPHLIIGMHYFSPVDKMQL--L-------EIITTEQTSQDTAASAVAVGLKQGKVVITVK----DGPGFYTTRI- 181 (269)
Q Consensus 117 -~~~~~p~R~i~~HffnP~~~~~l--V-------Eiv~~~~Ts~e~~~~~~~~~~~lGk~pv~vk----d~pGfI~nRl- 181 (269)
+....-.+|-+. |||-.+.|= + =||-| .++++..+.+.++++.+....++.. |.--.+.|-.
T Consensus 159 l~~~~~~~~f~v~--~~PErl~eG~a~~d~~~~~riViG-~~~~~a~~~~~~ly~~~~~~~~~~~~~~AE~~Kl~eN~~r 235 (444)
T 3vtf_A 159 VAEEAGGVKFSVA--SNPEFLREGSALEDFFKPDRIVIG-AGDERAASFLLDVYKAVDAPKLVMKPREAELVKYASNVFL 235 (444)
T ss_dssp HHTTTTTCCCEEE--ECCCCCCTTSHHHHHHSCSCEEEE-ESSHHHHHHHHHHTTTSCSCEEEECHHHHHHHHHHHHHHH
T ss_pred HHHhCCCCCceee--cCcccccCCccccccccCCcEEEc-CCCHHHHHHHHHHHhccCCCEEEechhHHHHHHHHHHHHH
Confidence 111111222222 234332210 0 02222 2567888888999988765444332 1111233332
Q ss_pred --HHHHHHHHHHHHH-cCCCHHHHHHHH
Q psy9059 182 --LSTMLSEAMRILQ-EGTSPKDLDRLT 206 (269)
Q Consensus 182 --l~al~~EA~~lv~-eGis~edID~a~ 206 (269)
--+++||...+.+ -|+++.++=.++
T Consensus 236 avnIa~~NEla~ice~~GiDv~eV~~a~ 263 (444)
T 3vtf_A 236 ALKISFANEVGLLAKRLGVDTYRVFEAV 263 (444)
T ss_dssp HHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHHHh
Confidence 3578899988876 588777766554
No 104
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=80.57 E-value=0.36 Score=43.59 Aligned_cols=46 Identities=13% Similarity=0.137 Sum_probs=32.9
Q ss_pred cCHHHHhcCCCCceEEeec--------------CCCcCCCchhHHHHHHHhcCCCCc--EEecCCCC
Q psy9059 58 YTYSERLMGSNGLAMVFPL--------------QEQIPIQTPQQMSERIYMYTYSER--LMGSNGLA 108 (269)
Q Consensus 58 ~~~~~a~~~~~~~~V~E~v--------------pE~l~~K~k~~l~~~l~~~~~~~~--iiaSnTS~ 108 (269)
.+..++++||| +|+.++ .++.++| +++.+++.+++ |++ ++.||...
T Consensus 66 ~~~~~al~~aD--vViia~~~~~~~g~~r~dl~~~n~~i~--~~i~~~i~~~~-p~a~~iv~tNPv~ 127 (316)
T 1ldn_A 66 HGDYDDCRDAD--LVVICAGANQKPGETRLDLVDKNIAIF--RSIVESVMASG-FQGLFLVATNPVD 127 (316)
T ss_dssp ECCGGGTTTCS--EEEECCSCCCCTTTCSGGGHHHHHHHH--HHHHHHHHHHT-CCSEEEECSSSHH
T ss_pred cCcHHHhCCCC--EEEEcCCCCCCCCCCHHHHHHcChHHH--HHHHHHHHHHC-CCCEEEEeCCchH
Confidence 35567887766 999995 3333556 99999999998 565 66677543
No 105
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=80.49 E-value=0.15 Score=49.33 Aligned_cols=25 Identities=0% Similarity=0.041 Sum_probs=21.6
Q ss_pred CcCeEEecCHHHHhcCCCCceEEeecC
Q psy9059 51 HTGITYLYTYSERLMGSNGLAMVFPLQ 77 (269)
Q Consensus 51 ~~~l~~~~~~~~a~~~~~~~~V~E~vp 77 (269)
..+++.++++.+|++||| +|+++++
T Consensus 62 ~~~I~~ttD~~eal~dAD--~VIiaag 86 (480)
T 1obb_A 62 DLKFEKTMNLDDVIIDAD--FVINTAM 86 (480)
T ss_dssp CCEEEEESCHHHHHTTCS--EEEECCC
T ss_pred CcEEEEECCHHHHhCCCC--EEEECCC
Confidence 467888899999998877 9999994
No 106
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=76.00 E-value=8.9 Score=33.28 Aligned_cols=108 Identities=7% Similarity=-0.068 Sum_probs=59.3
Q ss_pred eEEecCHHHHhcCCCCceEEeecCCCcCCCchhHHHHHHHhcCCCCcEEecCCCCCcccccc-cC-CCCCCCeEEEeecc
Q psy9059 54 ITYLYTYSERLMGSNGLAMVFPLQEQIPIQTPQQMSERIYMYTYSERLMGSNGLAMVFPLQE-QI-PIQTPHLIIGMHYF 131 (269)
Q Consensus 54 l~~~~~~~~a~~~~~~~~V~E~vpE~l~~K~k~~l~~~l~~~~~~~~iiaSnTS~l~~p~~~-~~-~~~~p~R~i~~Hff 131 (269)
++..++. +++.++ |+|+=+|+-.- = .+++++|.++++++++|-+-+.++ ...+ +. .... .+++....+
T Consensus 72 ~~~~~~~-~~~~~~--D~vil~vk~~~--~--~~v~~~i~~~l~~~~~iv~~~nG~--~~~~~l~~~l~~-~~v~~g~~~ 141 (317)
T 2qyt_A 72 TCVTDNP-AEVGTV--DYILFCTKDYD--M--ERGVAEIRPMIGQNTKILPLLNGA--DIAERMRTYLPD-TVVWKGCVY 141 (317)
T ss_dssp SEEESCH-HHHCCE--EEEEECCSSSC--H--HHHHHHHGGGEEEEEEEEECSCSS--SHHHHHTTTSCT-TTBCEEEEE
T ss_pred ceEecCc-cccCCC--CEEEEecCccc--H--HHHHHHHHhhcCCCCEEEEccCCC--CcHHHHHHHCCC-CcEEEEEEE
Confidence 3444444 456554 49999997643 3 578888988888888777766665 3322 32 2322 233222222
Q ss_pred CCCCCC----------cEEEEeCC--CCCCHHHHHHHHHHHHhCCcEEEEEec
Q psy9059 132 SPVDKM----------QLLEIITT--EQTSQDTAASAVAVGLKQGKVVITVKD 172 (269)
Q Consensus 132 nP~~~~----------~lVEiv~~--~~Ts~e~~~~~~~~~~~lGk~pv~vkd 172 (269)
.++... .-.-++.. +..+++.. .+.+++...|.......|
T Consensus 142 ~~a~~~~pg~~~~~~~g~~~~ig~~~~~~~~~~~-~~~~ll~~~g~~~~~~~d 193 (317)
T 2qyt_A 142 ISARKSAPGLITLEADRELFYFGSGLPEQTDDEV-RLAELLTAAGIRAYNPTD 193 (317)
T ss_dssp EEEEEEETTEEEEEEEEEEEEEECCSSSCCHHHH-HHHHHHHHTTCCEECCSC
T ss_pred EEEEEcCCCEEEEcCCCceEEEcCCCCCCcCHHH-HHHHHHHHCCCCCEEchH
Confidence 222110 00111322 33456766 888888998877655544
No 107
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=71.12 E-value=1.6 Score=38.77 Aligned_cols=63 Identities=13% Similarity=0.194 Sum_probs=42.1
Q ss_pred ecCHHHHhcCCCCceEEeecCCCc------------------CCCchhHHHHHHHhcCCCCcEE--ecCCCCCccccccc
Q psy9059 57 LYTYSERLMGSNGLAMVFPLQEQI------------------PIQTPQQMSERIYMYTYSERLM--GSNGLAMVFPLQEQ 116 (269)
Q Consensus 57 ~~~~~~a~~~~~~~~V~E~vpE~l------------------~~K~k~~l~~~l~~~~~~~~ii--aSnTS~l~~p~~~~ 116 (269)
..++ +++.++| +|+.+++..- +++ +++.++|.++++ ++++ .||.+.. .+.+
T Consensus 61 ~~d~-~~~~~aD--vViiav~~~~~~~~~~g~~r~~l~~~n~~i~--~~i~~~i~~~~~-~~~ii~~tNp~~~---~~~~ 131 (309)
T 1hyh_A 61 INDW-AALADAD--VVISTLGNIKLQQDNPTGDRFAELKFTSSMV--QSVGTNLKESGF-HGVLVVISNPVDV---ITAL 131 (309)
T ss_dssp ESCG-GGGTTCS--EEEECCSCGGGTC-------CTTHHHHHHHH--HHHHHHHHHTTC-CSEEEECSSSHHH---HHHH
T ss_pred eCCH-HHhCCCC--EEEEecCCcccCCCCCCCCHHHHHHHHHHHH--HHHHHHHHHHCC-CcEEEEEcCcHHH---HHHH
Confidence 4677 8887766 9999998633 234 799999999885 5544 6776553 2222
Q ss_pred -CC--CCCCCeEEEe
Q psy9059 117 -IP--IQTPHLIIGM 128 (269)
Q Consensus 117 -~~--~~~p~R~i~~ 128 (269)
.. .-.|.|++++
T Consensus 132 ~~~~~~~~~~rvig~ 146 (309)
T 1hyh_A 132 FQHVTGFPAHKVIGT 146 (309)
T ss_dssp HHHHHCCCGGGEEEC
T ss_pred HHHhcCCCHHHEeec
Confidence 11 2346788888
No 108
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=70.35 E-value=3.5 Score=39.34 Aligned_cols=25 Identities=8% Similarity=0.124 Sum_probs=22.1
Q ss_pred CcCeEEecCHHHHhcCCCCceEEeecC
Q psy9059 51 HTGITYLYTYSERLMGSNGLAMVFPLQ 77 (269)
Q Consensus 51 ~~~l~~~~~~~~a~~~~~~~~V~E~vp 77 (269)
..++++++|++||++||| +|+++++
T Consensus 60 ~~~I~~TtD~~eAl~dAD--fVI~air 84 (450)
T 3fef_A 60 RWRYEAVSTLKKALSAAD--IVIISIL 84 (450)
T ss_dssp CEEEEEESSHHHHHTTCS--EEEECCC
T ss_pred CCeEEEECCHHHHhcCCC--EEEeccc
Confidence 357999999999998877 9999994
No 109
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=69.77 E-value=28 Score=30.57 Aligned_cols=109 Identities=11% Similarity=-0.049 Sum_probs=61.3
Q ss_pred EecCHHHHhcCCCCceEEeecCCCcCCCchhHHHHHHHhcCCCCcEEecCCCCCcccccccC-CCCCCCeEEEe---ecc
Q psy9059 56 YLYTYSERLMGSNGLAMVFPLQEQIPIQTPQQMSERIYMYTYSERLMGSNGLAMVFPLQEQI-PIQTPHLIIGM---HYF 131 (269)
Q Consensus 56 ~~~~~~~a~~~~~~~~V~E~vpE~l~~K~k~~l~~~l~~~~~~~~iiaSnTS~l~~p~~~~~-~~~~p~R~i~~---Hff 131 (269)
..++.++ +.++| +|+-+|+-.- = .+++++|.++++++++|.|-..|+. +.+.+. ... ..+++.. +..
T Consensus 60 ~~~~~~~-~~~~D--~vilavk~~~--~--~~~l~~l~~~l~~~~~iv~l~nGi~-~~~~l~~~~~-~~~v~~~~~~~~a 130 (312)
T 3hn2_A 60 GYRAPEE-IGPMD--LVLVGLKTFA--N--SRYEELIRPLVEEGTQILTLQNGLG-NEEALATLFG-AERIIGGVAFLCS 130 (312)
T ss_dssp EESCHHH-HCCCS--EEEECCCGGG--G--GGHHHHHGGGCCTTCEEEECCSSSS-HHHHHHHHTC-GGGEEEEEEEEEC
T ss_pred eecCHHH-cCCCC--EEEEecCCCC--c--HHHHHHHHhhcCCCCEEEEecCCCC-cHHHHHHHCC-CCcEEEEEEEeee
Confidence 3456654 55545 9999997632 2 4789999999999999998888872 222222 121 1344332 111
Q ss_pred ---CCCCC--C--cEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEEecc
Q psy9059 132 ---SPVDK--M--QLLEIITTEQTSQDTAASAVAVGLKQGKVVITVKDG 173 (269)
Q Consensus 132 ---nP~~~--~--~lVEiv~~~~Ts~e~~~~~~~~~~~lGk~pv~vkd~ 173 (269)
.|-.. . ..+-+-..+..+.+..+.+.+++...|.......|.
T Consensus 131 ~~~~p~~v~~~~~g~~~ig~~~~~~~~~~~~l~~~l~~~g~~~~~~~di 179 (312)
T 3hn2_A 131 NRGEPGEVHHLGAGRIILGEFLPRDTGRIEELAAMFRQAGVDCRTTDDL 179 (312)
T ss_dssp CBCSSSEEEECEEEEEEEEESSCCCSHHHHHHHHHHHHTTCCEEECSCH
T ss_pred EEcCCcEEEECCCCeEEEecCCCCccHHHHHHHHHHHhCCCCcEEChHH
Confidence 11110 0 112222222334566777788888888766554554
No 110
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=68.31 E-value=11 Score=31.95 Aligned_cols=107 Identities=9% Similarity=0.050 Sum_probs=60.3
Q ss_pred EecCHHHHhcCCCCceEEeecCCCcCCCchhHHHHHH-HhcCCCCcEEecCCCCC--------cc-c-----ccc-c-CC
Q psy9059 56 YLYTYSERLMGSNGLAMVFPLQEQIPIQTPQQMSERI-YMYTYSERLMGSNGLAM--------VF-P-----LQE-Q-IP 118 (269)
Q Consensus 56 ~~~~~~~a~~~~~~~~V~E~vpE~l~~K~k~~l~~~l-~~~~~~~~iiaSnTS~l--------~~-p-----~~~-~-~~ 118 (269)
...|.+|++.++| +|+.|+|..-. .+++.++ .... ++++|-+-+.++ ++ | +++ + +.
T Consensus 80 ~~~~~~e~~~~aD--vVilavp~~~~----~~~~~~i~~~~l-~g~ivi~~s~~~~~~~G~~~t~~~~~~~~~~~~l~~~ 152 (245)
T 3dtt_A 80 HLAAFADVAAGAE--LVVNATEGASS----IAALTAAGAENL-AGKILVDIANPLDFSHGMPPTLNPVNTDSLGEQIQRT 152 (245)
T ss_dssp EEEEHHHHHHHCS--EEEECSCGGGH----HHHHHHHCHHHH-TTSEEEECCCCEECTTCSSCEESSCSSCCHHHHHHHH
T ss_pred eccCHHHHHhcCC--EEEEccCcHHH----HHHHHHhhhhhc-CCCEEEECCCCCCCcCCccccccCCCCccHHHHHHHH
Confidence 3568999998776 99999997422 3455566 5555 566665544221 00 1 111 1 12
Q ss_pred CCCCCeEEEeeccCCCC---------CCcEEEEeCCCCCCHHHHHHHHHHHHhCCcEE-EEEec
Q psy9059 119 IQTPHLIIGMHYFSPVD---------KMQLLEIITTEQTSQDTAASAVAVGLKQGKVV-ITVKD 172 (269)
Q Consensus 119 ~~~p~R~i~~HffnP~~---------~~~lVEiv~~~~Ts~e~~~~~~~~~~~lGk~p-v~vkd 172 (269)
+. ..+++-.-.+.|.. ..++.=++.|. +++..+.+..+++.+|+.+ +.+.+
T Consensus 153 l~-~~~vv~~~~~~~a~v~~~~~~a~~g~~~~~v~g~--d~~~~~~v~~ll~~~g~~~~~~~G~ 213 (245)
T 3dtt_A 153 FP-EAKVVKTLNTMNASLMVDPGRAAGGDHSVFVSGN--DAAAKAEVATLLKSLGHQDVIDLGD 213 (245)
T ss_dssp ST-TSEEEECSTTSCHHHHHCGGGTGGGCCCEEEECS--CHHHHHHHHHHHHHTTCCCEEEEES
T ss_pred CC-CCeEEEeecccCHHHhcCccccCCCCeeEEEECC--CHHHHHHHHHHHHHcCCCceeccCc
Confidence 22 24555332222211 12333344443 7899999999999999865 55643
No 111
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=67.97 E-value=14 Score=32.61 Aligned_cols=110 Identities=6% Similarity=-0.090 Sum_probs=62.8
Q ss_pred EEecCHHHHhcCCCCceEEeecCCCcCCCchhHHHHHHHhcCCCCcEEecCCCCCcccccccC-CCCCCCeEEEeec---
Q psy9059 55 TYLYTYSERLMGSNGLAMVFPLQEQIPIQTPQQMSERIYMYTYSERLMGSNGLAMVFPLQEQI-PIQTPHLIIGMHY--- 130 (269)
Q Consensus 55 ~~~~~~~~a~~~~~~~~V~E~vpE~l~~K~k~~l~~~l~~~~~~~~iiaSnTS~l~~p~~~~~-~~~~p~R~i~~Hf--- 130 (269)
+.+.+.+++..++| +|+=|||-.- + .+++++|..+++++++|.|-+.++. +.+.+. ... ..+++..=-
T Consensus 60 ~~~~~~~~~~~~~D--lVilavK~~~-~---~~~l~~l~~~l~~~t~Iv~~~nGi~-~~~~l~~~~~-~~~vl~g~~~~~ 131 (320)
T 3i83_A 60 AVVRSAAELETKPD--CTLLCIKVVE-G---ADRVGLLRDAVAPDTGIVLISNGID-IEPEVAAAFP-DNEVISGLAFIG 131 (320)
T ss_dssp CEESCGGGCSSCCS--EEEECCCCCT-T---CCHHHHHTTSCCTTCEEEEECSSSS-CSHHHHHHST-TSCEEEEEEEEE
T ss_pred eeECCHHHcCCCCC--EEEEecCCCC-h---HHHHHHHHhhcCCCCEEEEeCCCCC-hHHHHHHHCC-CCcEEEEEEEec
Confidence 44567777654555 9999998743 2 3588999999999999988888872 222232 222 234443211
Q ss_pred ---cCCCCC--CcEEEEeCC--CCCCHHHHHHHHHHHHhCCcEEEEEec
Q psy9059 131 ---FSPVDK--MQLLEIITT--EQTSQDTAASAVAVGLKQGKVVITVKD 172 (269)
Q Consensus 131 ---fnP~~~--~~lVEiv~~--~~Ts~e~~~~~~~~~~~lGk~pv~vkd 172 (269)
..|-.. ...-.++-| +..+.+..+.+.+++...|.......|
T Consensus 132 a~~~~pg~v~~~~~~~~~ig~~~~~~~~~~~~l~~~l~~~~~~~~~~~d 180 (320)
T 3i83_A 132 VTRTAPGEIWHQAYGRLMLGNYPGGVSERVKTLAAAFEEAGIDGIATEN 180 (320)
T ss_dssp EEEEETTEEEEEEEEEEEEEESSSCCCHHHHHHHHHHHHTTSCEEECSC
T ss_pred eEEcCCCEEEECCCCEEEEecCCCCccHHHHHHHHHHHhCCCCceECHH
Confidence 112110 011122222 223446667777888887876655455
No 112
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=64.66 E-value=1.9 Score=39.61 Aligned_cols=52 Identities=17% Similarity=0.154 Sum_probs=38.2
Q ss_pred cCeEEecCHHHHhcCCCCceEEeec--C------------CCcCCCchhHHHHHHHhcCCCCc--EEecCCC
Q psy9059 52 TGITYLYTYSERLMGSNGLAMVFPL--Q------------EQIPIQTPQQMSERIYMYTYSER--LMGSNGL 107 (269)
Q Consensus 52 ~~l~~~~~~~~a~~~~~~~~V~E~v--p------------E~l~~K~k~~l~~~l~~~~~~~~--iiaSnTS 107 (269)
.+++++.++.++++||| +|+-++ | .|..+. +++..+|.+++++.. ++.||-.
T Consensus 62 ~~i~~t~d~~~al~dAD--vVvitaG~p~kpG~~R~dLl~~N~~I~--~~i~~~i~~~~p~a~~vlvvsNPv 129 (343)
T 3fi9_A 62 LNLTFTSDIKEALTDAK--YIVSSGGAPRKEGMTREDLLKGNAEIA--AQLGKDIKSYCPDCKHVIIIFNPA 129 (343)
T ss_dssp CCCEEESCHHHHHTTEE--EEEECCC-------CHHHHHHHHHHHH--HHHHHHHHHHCTTCCEEEECSSSH
T ss_pred CceEEcCCHHHHhCCCC--EEEEccCCCCCCCCCHHHHHHHHHHHH--HHHHHHHHHhccCcEEEEEecCch
Confidence 57889999999998877 888775 2 223444 788889999997664 4677743
No 113
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=64.15 E-value=1.5 Score=40.15 Aligned_cols=51 Identities=20% Similarity=0.128 Sum_probs=36.2
Q ss_pred CcCeEEecCHHHHhcCCCCceEEee--------------cCCCcCCCchhHHHHHHHhcCCCCcE--EecCCC
Q psy9059 51 HTGITYLYTYSERLMGSNGLAMVFP--------------LQEQIPIQTPQQMSERIYMYTYSERL--MGSNGL 107 (269)
Q Consensus 51 ~~~l~~~~~~~~a~~~~~~~~V~E~--------------vpE~l~~K~k~~l~~~l~~~~~~~~i--iaSnTS 107 (269)
..+++.+.++++ ++|+| +|+.+ +.+|.+++ +++..+|.+++| +++ +.||-.
T Consensus 75 ~~~i~~t~d~~~-~~daD--iVIitaG~p~kpG~tR~dll~~N~~I~--k~i~~~I~k~~P-~a~ilvvtNPv 141 (330)
T 3ldh_A 75 TAKIVSGKDYSV-SAGSK--LVVITAGARQQEGESRLNLVQRNVNIF--KFIIPNIVKHSP-DCLKELHPELG 141 (330)
T ss_dssp CSEEEEESSSCS-CSSCS--EEEECCSCCCCSSCCTTGGGHHHHHHH--HHHHHHHHHHCT-TCEEEECSSSH
T ss_pred CCeEEEcCCHHH-hCCCC--EEEEeCCCCCCCCCCHHHHHHhhHHHH--HHHHHHHHhhCC-CceEEeCCCcc
Confidence 357888889876 87766 99966 34555666 999999999964 553 446543
No 114
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=58.61 E-value=11 Score=33.27 Aligned_cols=45 Identities=9% Similarity=0.092 Sum_probs=36.0
Q ss_pred EEecCHHHHhcCCCCceEEeecCCCcCCCchhHHHHHHHhcCCCCcEEecC
Q psy9059 55 TYLYTYSERLMGSNGLAMVFPLQEQIPIQTPQQMSERIYMYTYSERLMGSN 105 (269)
Q Consensus 55 ~~~~~~~~a~~~~~~~~V~E~vpE~l~~K~k~~l~~~l~~~~~~~~iiaSn 105 (269)
...+++++++.++| +|+.++|... - .++++++.+++++++++.+.
T Consensus 64 ~~~~~~~~~~~~~D--~vi~~v~~~~--~--~~~~~~l~~~l~~~~~vv~~ 108 (359)
T 1bg6_A 64 LLTSDIGLAVKDAD--VILIVVPAIH--H--ASIAANIASYISEGQLIILN 108 (359)
T ss_dssp EEESCHHHHHTTCS--EEEECSCGGG--H--HHHHHHHGGGCCTTCEEEES
T ss_pred eecCCHHHHHhcCC--EEEEeCCchH--H--HHHHHHHHHhCCCCCEEEEc
Confidence 46789999997766 9999999854 3 67889999999988865544
No 115
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=52.42 E-value=1.2e+02 Score=26.52 Aligned_cols=134 Identities=10% Similarity=-0.007 Sum_probs=69.4
Q ss_pred CeEEecCHHHHhcCCCCceEEeecCCCcCCCchhHHHHHHHhcCCCCcEEecCCCCCccc-ccccC-CC--CCCCeEEEe
Q psy9059 53 GITYLYTYSERLMGSNGLAMVFPLQEQIPIQTPQQMSERIYMYTYSERLMGSNGLAMVFP-LQEQI-PI--QTPHLIIGM 128 (269)
Q Consensus 53 ~l~~~~~~~~a~~~~~~~~V~E~vpE~l~~K~k~~l~~~l~~~~~~~~iiaSnTS~l~~p-~~~~~-~~--~~p~R~i~~ 128 (269)
+++.+++.+| +.++| +|+=+||- -.+ .+++.+ +.++++++-|-+.+++.. ...+. .. ..+..+...
T Consensus 68 ~~~~~~~~~~-~~~aD--vVil~vk~-~~~---~~v~~~---l~~~~~~vv~~~nGi~~~~~~~l~~~~~~~~~~~~~~~ 137 (335)
T 1z82_A 68 TVRATNDLEE-IKKED--ILVIAIPV-QYI---REHLLR---LPVKPSMVLNLSKGIEIKTGKRVSEIVEEILGCPYAVL 137 (335)
T ss_dssp CSEEESCGGG-CCTTE--EEEECSCG-GGH---HHHHTT---CSSCCSEEEECCCCCCTTTCCCHHHHHHHHTCCCEEEE
T ss_pred eEEEeCCHHH-hcCCC--EEEEECCH-HHH---HHHHHH---hCcCCCEEEEEeCCCCCCccCcHHHHHHHHcCCceEEE
Confidence 5788889988 76655 99999984 222 233333 333676666555555211 11110 00 001111111
Q ss_pred eccCCCCC-----CcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEEeccCc----------------------hhHH--
Q psy9059 129 HYFSPVDK-----MQLLEIITTEQTSQDTAASAVAVGLKQGKVVITVKDGPG----------------------FYTT-- 179 (269)
Q Consensus 129 HffnP~~~-----~~lVEiv~~~~Ts~e~~~~~~~~~~~lGk~pv~vkd~pG----------------------fI~n-- 179 (269)
..|... -.+..++.+.. + .+.+.+++...|..+....|..| +.-|
T Consensus 138 --~~P~~~~~~~~g~~~~~~~g~~-~---~~~~~~ll~~~g~~~~~~~di~~~~~~k~l~N~~~~~~g~~~g~~~~~n~~ 211 (335)
T 1z82_A 138 --SGPSHAEEVAKKLPTAVTLAGE-N---SKELQKRISTEYFRVYTCEDVVGVEIAGALKNVIAIAAGILDGFGGWDNAK 211 (335)
T ss_dssp --ESSCCHHHHHTTCCEEEEEEET-T---HHHHHHHHCCSSEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHH
T ss_pred --ECCccHHHHhCCCceEEEEEeh-h---HHHHHHHhCCCCEEEEecCchHHHHHHHHHHhHHHHHHHHHhcCCCCchhH
Confidence 223211 11112222221 2 67788888888887766555322 1111
Q ss_pred -HHHHHHHHHHHHHHH-cCCCHHHH
Q psy9059 180 -RILSTMLSEAMRILQ-EGTSPKDL 202 (269)
Q Consensus 180 -Rll~al~~EA~~lv~-eGis~edI 202 (269)
.+....++|++.+.+ .|++++.+
T Consensus 212 ~a~~~~~~~E~~~la~a~G~~~~~~ 236 (335)
T 1z82_A 212 AALETRGIYEIARFGMFFGADQKTF 236 (335)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCChhhh
Confidence 455678889988765 78877655
No 116
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=51.87 E-value=6.1 Score=35.17 Aligned_cols=71 Identities=15% Similarity=0.211 Sum_probs=42.5
Q ss_pred CcCeEEecCHHHHhcCCCCceEEeecCC--C-----cCC-----CchhHHHHHHHhcCCCCc--EEecCCCCCccccccc
Q psy9059 51 HTGITYLYTYSERLMGSNGLAMVFPLQE--Q-----IPI-----QTPQQMSERIYMYTYSER--LMGSNGLAMVFPLQEQ 116 (269)
Q Consensus 51 ~~~l~~~~~~~~a~~~~~~~~V~E~vpE--~-----l~~-----K~k~~l~~~l~~~~~~~~--iiaSnTS~l~~p~~~~ 116 (269)
..+++++.++++ +.++| +|+++++- . .++ +..+++.++|.+++ +++ ++.||-... .+.+
T Consensus 55 ~~~i~~t~d~~~-l~~aD--vViiav~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-~~~~viv~tNP~~~---~~~~ 127 (310)
T 1guz_A 55 DTKVTGSNDYAD-TANSD--IVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHS-KNPIIIVVSNPLDI---MTHV 127 (310)
T ss_dssp CCEEEEESCGGG-GTTCS--EEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-SSCEEEECCSSHHH---HHHH
T ss_pred CcEEEECCCHHH-HCCCC--EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCcEEEEEcCchHH---HHHH
Confidence 457888888876 87766 99999952 1 111 22268888888887 455 344553322 1221
Q ss_pred -C--CCCCCCeEEEe
Q psy9059 117 -I--PIQTPHLIIGM 128 (269)
Q Consensus 117 -~--~~~~p~R~i~~ 128 (269)
. .--.|.|++|+
T Consensus 128 ~~~~~~~~~~rviG~ 142 (310)
T 1guz_A 128 AWVRSGLPKERVIGM 142 (310)
T ss_dssp HHHHHCSCGGGEEEE
T ss_pred HHHhcCCChHHEEEC
Confidence 1 11235688887
No 117
>1up7_A 6-phospho-beta-glucosidase; hydrolase, family4 hydrolase, Na dependent; HET: G6P NAD; 2.4A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 PDB: 1up6_A* 1up4_A
Probab=48.00 E-value=12 Score=35.17 Aligned_cols=70 Identities=13% Similarity=0.211 Sum_probs=43.8
Q ss_pred cCeEEecCHHHHhcCCCCceEEeec----------CCCcCCC----------------------chhHHHHHHHhcCCCC
Q psy9059 52 TGITYLYTYSERLMGSNGLAMVFPL----------QEQIPIQ----------------------TPQQMSERIYMYTYSE 99 (269)
Q Consensus 52 ~~l~~~~~~~~a~~~~~~~~V~E~v----------pE~l~~K----------------------~k~~l~~~l~~~~~~~ 99 (269)
.+++.+.++.+|++||| +|+.++ -|.+.+| .=+++-++|.++| |
T Consensus 59 ~~v~~t~d~~~al~~AD--~Viitagvg~~~~~~rd~~i~~k~glvgqeT~G~GGi~~~~rni~i~~~i~~~i~~~~--~ 134 (417)
T 1up7_A 59 FKVLISDTFEGAVVDAK--YVIFQFRPGGLKGRENDEGIPLKYGLIGQETTGVGGFSAALRAFPIVEEYVDTVRKTS--N 134 (417)
T ss_dssp SEEEECSSHHHHHTTCS--EEEECCCTTHHHHHHHHHHGGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHTT--C
T ss_pred eEEEEeCCHHHHhCCCC--EEEEcCCCCCCCccchhhhhhhhcCcccccccccchhHHhhccHHHHHHHHHHHHHHC--C
Confidence 56777789999998877 999999 2222222 1147788999999 7
Q ss_pred cEEe--cCCCCCccccccc-CCCCCCCeEEEe
Q psy9059 100 RLMG--SNGLAMVFPLQEQ-IPIQTPHLIIGM 128 (269)
Q Consensus 100 ~iia--SnTS~l~~p~~~~-~~~~~p~R~i~~ 128 (269)
++|- ||-... ++.. .......|++|+
T Consensus 135 A~lin~TNPvdi---~t~a~~k~~p~~rviG~ 163 (417)
T 1up7_A 135 ATIVNFTNPSGH---ITEFVRNYLEYEKFIGL 163 (417)
T ss_dssp CEEEECSSSHHH---HHHHHHHTTCCSSEEEC
T ss_pred EEEEEeCChHHH---HHHHHHHhCCCCCEEEe
Confidence 7665 554433 2332 122223377776
No 118
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=52.52 E-value=4.1 Score=34.04 Aligned_cols=104 Identities=10% Similarity=0.089 Sum_probs=58.6
Q ss_pred eEEecCHHHHhcCCCCceEEeecCCCcCCCchhHHHHHHHhcCCCCcEEecCCCCCcccc--------cccC-CCCCCCe
Q psy9059 54 ITYLYTYSERLMGSNGLAMVFPLQEQIPIQTPQQMSERIYMYTYSERLMGSNGLAMVFPL--------QEQI-PIQTPHL 124 (269)
Q Consensus 54 l~~~~~~~~a~~~~~~~~V~E~vpE~l~~K~k~~l~~~l~~~~~~~~iiaSnTS~l~~p~--------~~~~-~~~~p~R 124 (269)
++.. +..|++.++| +|+=++|-. .++ +++ ++... .++++|-+-++++ |. ..++ ... ..+
T Consensus 62 ~~~~-~~~~~~~~aD--vVilav~~~-~~~---~v~-~l~~~-~~~~ivI~~~~G~--~~~~~~~~~~~~l~~~~~-~~~ 129 (201)
T 2yjz_A 62 AEVL-CYSEAASRSD--VIVLAVHRE-HYD---FLA-ELADS-LKGRVLIDVSNNQ--KMNQYPESNAEYLAQLVP-GAH 129 (201)
Confidence 3444 7788887666 999999864 344 344 45443 4567777766665 42 2221 222 134
Q ss_pred EEEeeccCCCCCCc---E----EEEeCCCCCCHHHHHHHHHHHHhCCcEEEEEe
Q psy9059 125 IIGMHYFSPVDKMQ---L----LEIITTEQTSQDTAASAVAVGLKQGKVVITVK 171 (269)
Q Consensus 125 ~i~~HffnP~~~~~---l----VEiv~~~~Ts~e~~~~~~~~~~~lGk~pv~vk 171 (269)
++..=+..|..... + .-++.+. +++..+.+..+++.+|+.++.+.
T Consensus 130 vvra~~n~~a~~~~~g~l~g~~~~~~~g~--~~~~~~~v~~ll~~~G~~~~~~G 181 (201)
T 2yjz_A 130 VVKAFNTISAWALQSGTLDASRQVFVCGN--DSKAKDRVMDIARTLGLTPLDQG 181 (201)
Confidence 43333333333221 0 0133332 46778888999999999988774
No 119
>4f2g_A Otcase 1, ornithine carbamoyltransferase 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=42.53 E-value=18 Score=32.76 Aligned_cols=17 Identities=12% Similarity=0.004 Sum_probs=15.3
Q ss_pred cCeEEecCHHHHhcCCC
Q psy9059 52 TGITYLYTYSERLMGSN 68 (269)
Q Consensus 52 ~~l~~~~~~~~a~~~~~ 68 (269)
++++.+.++.||+.+||
T Consensus 202 ~~v~~~~d~~eav~~aD 218 (309)
T 4f2g_A 202 PFYQVFDDPNEACKGAD 218 (309)
T ss_dssp GGEEECSSHHHHTTTCS
T ss_pred CeEEEEcCHHHHhcCCC
Confidence 47889999999999988
No 120
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=41.84 E-value=4.3 Score=36.76 Aligned_cols=69 Identities=17% Similarity=0.192 Sum_probs=42.3
Q ss_pred cCeEEecCHHHHhcCCCCceEEeec--CC------------CcCCCchhHHHHHHHhcCCCCcE--EecCCCCCcccccc
Q psy9059 52 TGITYLYTYSERLMGSNGLAMVFPL--QE------------QIPIQTPQQMSERIYMYTYSERL--MGSNGLAMVFPLQE 115 (269)
Q Consensus 52 ~~l~~~~~~~~a~~~~~~~~V~E~v--pE------------~l~~K~k~~l~~~l~~~~~~~~i--iaSnTS~l~~p~~~ 115 (269)
.+++.+.++ ++++||| +|+-++ |. +..+- +++..+|.+++ |+++ +.||.... ++.
T Consensus 60 ~~v~~t~d~-~a~~~aD--vVIi~ag~p~k~G~~R~dl~~~N~~i~--~~i~~~i~~~~-p~a~vivvtNPvd~---~t~ 130 (321)
T 3p7m_A 60 FKVRGTNDY-KDLENSD--VVIVTAGVPRKPGMSRDDLLGINIKVM--QTVGEGIKHNC-PNAFVICITNPLDI---MVN 130 (321)
T ss_dssp CCEEEESCG-GGGTTCS--EEEECCSCCCCTTCCHHHHHHHHHHHH--HHHHHHHHHHC-TTCEEEECCSSHHH---HHH
T ss_pred cEEEEcCCH-HHHCCCC--EEEEcCCcCCCCCCCHHHHHHHhHHHH--HHHHHHHHHHC-CCcEEEEecCchHH---HHH
Confidence 456655665 7898877 999986 32 22334 77888899998 5665 44665443 122
Q ss_pred -c-CCCCC-CCeEEEee
Q psy9059 116 -Q-IPIQT-PHLIIGMH 129 (269)
Q Consensus 116 -~-~~~~~-p~R~i~~H 129 (269)
+ ..... |.|++|+.
T Consensus 131 ~~~k~sg~p~~rviG~~ 147 (321)
T 3p7m_A 131 MLQKFSGVPDNKIVGMA 147 (321)
T ss_dssp HHHHHHCCCGGGEEEEC
T ss_pred HHHHhcCCCHHHEEeec
Confidence 1 22333 47888876
No 121
>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A*
Probab=39.97 E-value=20 Score=34.16 Aligned_cols=23 Identities=9% Similarity=0.157 Sum_probs=19.8
Q ss_pred cCeEEecCHHHHhcCCCCceEEeec
Q psy9059 52 TGITYLYTYSERLMGSNGLAMVFPL 76 (269)
Q Consensus 52 ~~l~~~~~~~~a~~~~~~~~V~E~v 76 (269)
.+++.++|..||++||| +|+-++
T Consensus 62 ~~i~~t~d~~eAl~gAD--~Vi~~~ 84 (477)
T 3u95_A 62 VKVVKTESLDEAIEGAD--FIINTA 84 (477)
T ss_dssp CEEEEESCHHHHHTTCS--EEEECC
T ss_pred eEEEEeCCHHHHhCCCC--EEEECc
Confidence 56888899999999988 999776
No 122
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=37.85 E-value=25 Score=31.67 Aligned_cols=21 Identities=14% Similarity=0.178 Sum_probs=16.9
Q ss_pred cCeEEecCHHHHhcCCCCceEEe
Q psy9059 52 TGITYLYTYSERLMGSNGLAMVF 74 (269)
Q Consensus 52 ~~l~~~~~~~~a~~~~~~~~V~E 74 (269)
++++.+.++.||+.+|| .|.=
T Consensus 203 ~~~~~~~d~~eav~~aD--vvy~ 223 (307)
T 2i6u_A 203 ASVTVTADAHAAAAGAD--VLVT 223 (307)
T ss_dssp CCEEEESCHHHHHTTCS--EEEE
T ss_pred CeEEEEECHHHHhcCCC--EEEe
Confidence 36888999999999988 4443
No 123
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=36.82 E-value=22 Score=33.85 Aligned_cols=26 Identities=4% Similarity=-0.024 Sum_probs=21.7
Q ss_pred CcCeEEecCHHHHhcCCCCceEEeecCC
Q psy9059 51 HTGITYLYTYSERLMGSNGLAMVFPLQE 78 (269)
Q Consensus 51 ~~~l~~~~~~~~a~~~~~~~~V~E~vpE 78 (269)
..+++.++|+.+|++||| +|+.+++=
T Consensus 87 ~~~I~~t~D~~eal~~AD--~VViaag~ 112 (472)
T 1u8x_X 87 DIEFAATTDPEEAFTDVD--FVMAHIRV 112 (472)
T ss_dssp TSEEEEESCHHHHHSSCS--EEEECCCT
T ss_pred CCEEEEECCHHHHHcCCC--EEEEcCCC
Confidence 356888889999998877 99999964
No 124
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=35.79 E-value=18 Score=31.62 Aligned_cols=52 Identities=8% Similarity=-0.042 Sum_probs=34.1
Q ss_pred cCeEEecCHHHHhcCCCCceEEeecCC--------------CcCCCchhHHHHHHHhcCCCCcEEecCCCCC
Q psy9059 52 TGITYLYTYSERLMGSNGLAMVFPLQE--------------QIPIQTPQQMSERIYMYTYSERLMGSNGLAM 109 (269)
Q Consensus 52 ~~l~~~~~~~~a~~~~~~~~V~E~vpE--------------~l~~K~k~~l~~~l~~~~~~~~iiaSnTS~l 109 (269)
.+++...+. +++.++| +|+.++.- +..++ +++..+|.++ .++++|.+-|-+.
T Consensus 62 ~~v~~~~~~-~~~~~aD--~Vii~v~~~~~~g~~r~~~~~~n~~~~--~~~~~~i~~~-~~~~~vi~~~Np~ 127 (319)
T 1lld_A 62 VSIDGSDDP-EICRDAD--MVVITAGPRQKPGQSRLELVGATVNIL--KAIMPNLVKV-APNAIYMLITNPV 127 (319)
T ss_dssp CEEEEESCG-GGGTTCS--EEEECCCCCCCTTCCHHHHHHHHHHHH--HHHHHHHHHH-CTTSEEEECCSSH
T ss_pred eEEEeCCCH-HHhCCCC--EEEECCCCCCCCCCCHHHHHHHHHHHH--HHHHHHHHHh-CCCceEEEecCch
Confidence 455555554 5776655 99999931 22344 6899999997 5777775544443
No 125
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=34.22 E-value=15 Score=35.29 Aligned_cols=107 Identities=11% Similarity=0.074 Sum_probs=61.1
Q ss_pred eEEecCHHHHhcCCCCceEEeecCCCcCCCchhHHHHHHHhcCCCCcEEecCCCCCccccccc---CCCCC-C-----Ce
Q psy9059 54 ITYLYTYSERLMGSNGLAMVFPLQEQIPIQTPQQMSERIYMYTYSERLMGSNGLAMVFPLQEQ---IPIQT-P-----HL 124 (269)
Q Consensus 54 l~~~~~~~~a~~~~~~~~V~E~vpE~l~~K~k~~l~~~l~~~~~~~~iiaSnTS~l~~p~~~~---~~~~~-p-----~R 124 (269)
..+. +++|++..+| +|+-++|-..+.+ .=+-+++-+.+++++++..-+.+- ++++. ..+.. . -+
T Consensus 185 ~~~~-~l~e~~~~aD--vV~l~~P~~~~t~--~~i~~~~~~~~k~g~ilin~arg~--iv~~~aL~~al~~g~i~ga~lD 257 (529)
T 1ygy_A 185 IELL-SLDDLLARAD--FISVHLPKTPETA--GLIDKEALAKTKPGVIIVNAARGG--LVDEAALADAITGGHVRAAGLD 257 (529)
T ss_dssp CEEC-CHHHHHHHCS--EEEECCCCSTTTT--TCBCHHHHTTSCTTEEEEECSCTT--SBCHHHHHHHHHTSSEEEEEES
T ss_pred cEEc-CHHHHHhcCC--EEEECCCCchHHH--HHhCHHHHhCCCCCCEEEECCCCc--hhhHHHHHHHHHcCCccEEEEe
Confidence 4444 8999998777 9999999765555 433334666788888877544443 33331 12211 0 12
Q ss_pred EEEeecc--CCCCCCcEEEEeCCCC-CCHHHHHH-----HHHHHHhCCcEE
Q psy9059 125 IIGMHYF--SPVDKMQLLEIITTEQ-TSQDTAAS-----AVAVGLKQGKVV 167 (269)
Q Consensus 125 ~i~~Hff--nP~~~~~lVEiv~~~~-Ts~e~~~~-----~~~~~~~lGk~p 167 (269)
++..||. +|-+-.+-+=+.|+.. ++++..++ +..+.+.++..+
T Consensus 258 v~~~eP~~~~~L~~~~~vilTPh~~~~t~ea~~~~~~~~~~~l~~~l~~~~ 308 (529)
T 1ygy_A 258 VFATEPCTDSPLFELAQVVVTPHLGASTAEAQDRAGTDVAESVRLALAGEF 308 (529)
T ss_dssp SCSSSSCSCCGGGGCTTEEECSSCSSCBHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred eccCCCCCCchHHhCCCEEEccccCCCCHHHHHHHHHHHHHHHHHHHcCCC
Confidence 3333441 2223345566888877 77887665 445555455444
No 126
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=32.53 E-value=46 Score=29.50 Aligned_cols=98 Identities=5% Similarity=-0.054 Sum_probs=59.2
Q ss_pred eEEecCHHHHhcCCCCceEEeecCCCcCCCchhHHHHHHHhcCCCCcEEecCCCCCcccccc--c-CCCC-CCCeEEEee
Q psy9059 54 ITYLYTYSERLMGSNGLAMVFPLQEQIPIQTPQQMSERIYMYTYSERLMGSNGLAMVFPLQE--Q-IPIQ-TPHLIIGMH 129 (269)
Q Consensus 54 l~~~~~~~~a~~~~~~~~V~E~vpE~l~~K~k~~l~~~l~~~~~~~~iiaSnTS~l~~p~~~--~-~~~~-~p~R~i~~H 129 (269)
..+..+++|.++.+| +|+=++|-..+.+ +-+-++.-+.++++++|-.-+++- ++.+ + +.+. ..-+..++.
T Consensus 161 ~~~~~~l~ell~~aD--iV~l~~P~t~~t~--~li~~~~l~~mk~gailIN~aRG~--~vd~~aL~~aL~~g~i~ga~lD 234 (290)
T 3gvx_A 161 DVISESPADLFRQSD--FVLIAIPLTDKTR--GMVNSRLLANARKNLTIVNVARAD--VVSKPDMIGFLKERSDVWYLSD 234 (290)
T ss_dssp SEECSSHHHHHHHCS--EEEECCCCCTTTT--TCBSHHHHTTCCTTCEEEECSCGG--GBCHHHHHHHHHHCTTCEEEES
T ss_pred ccccCChHHHhhccC--eEEEEeeccccch--hhhhHHHHhhhhcCceEEEeehhc--ccCCcchhhhhhhccceEEeec
Confidence 567789999998877 9999999776766 656567777889998876444332 2332 1 2221 222333443
Q ss_pred cc-----CCCCCCcEEEEeCCCC--CCHHHHHHHH
Q psy9059 130 YF-----SPVDKMQLLEIITTEQ--TSQDTAASAV 157 (269)
Q Consensus 130 ff-----nP~~~~~lVEiv~~~~--Ts~e~~~~~~ 157 (269)
.| +|-+.+|-|=+.|+-. .+++..+++.
T Consensus 235 V~~~EP~~pL~~~~nvilTPHiag~~t~e~~~~~~ 269 (290)
T 3gvx_A 235 VWWNEPEITETNLRNAILSPHVAGGMSGEIMDIAI 269 (290)
T ss_dssp CCTTTTSCCSCCCSSEEECCSCSSCBTTBCCHHHH
T ss_pred cccCCcccchhhhhhhhcCccccCCccchHHHHHH
Confidence 33 4555566676777622 3444444433
No 127
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=30.71 E-value=54 Score=29.76 Aligned_cols=52 Identities=6% Similarity=-0.052 Sum_probs=32.4
Q ss_pred CeEEecCHHHHhcCCCCceEEeecCCCcCCCchhHHHHHHHhcCCCCcEEecCCCC
Q psy9059 53 GITYLYTYSERLMGSNGLAMVFPLQEQIPIQTPQQMSERIYMYTYSERLMGSNGLA 108 (269)
Q Consensus 53 ~l~~~~~~~~a~~~~~~~~V~E~vpE~l~~K~k~~l~~~l~~~~~~~~iiaSnTS~ 108 (269)
...+..+++|.++.+| +|+-++|-..+.+ +-+-+++-+.++++++|-.-+.+
T Consensus 209 ~~~~~~sl~ell~~aD--vVil~vP~t~~t~--~li~~~~l~~mk~gailIN~aRG 260 (340)
T 4dgs_A 209 DWIAHQSPVDLARDSD--VLAVCVAASAATQ--NIVDASLLQALGPEGIVVNVARG 260 (340)
T ss_dssp CCEECSSHHHHHHTCS--EEEECC------------CHHHHHHTTTTCEEEECSCC
T ss_pred CceecCCHHHHHhcCC--EEEEeCCCCHHHH--HHhhHHHHhcCCCCCEEEECCCC
Confidence 3567789999998877 9999999877776 66656777778888887644443
No 128
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=30.64 E-value=40 Score=31.86 Aligned_cols=25 Identities=12% Similarity=0.122 Sum_probs=21.1
Q ss_pred CcCeEEecCHHHHhcCCCCceEEeecC
Q psy9059 51 HTGITYLYTYSERLMGSNGLAMVFPLQ 77 (269)
Q Consensus 51 ~~~l~~~~~~~~a~~~~~~~~V~E~vp 77 (269)
..+++.+.++.||++||| +|+-+++
T Consensus 68 ~~~i~~t~D~~eal~gAD--~VVitag 92 (450)
T 1s6y_A 68 PIEIHLTLDRRRALDGAD--FVTTQFR 92 (450)
T ss_dssp CCEEEEESCHHHHHTTCS--EEEECCC
T ss_pred CcEEEEeCCHHHHhCCCC--EEEEcCC
Confidence 356777889999998877 9999987
No 129
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=29.61 E-value=20 Score=32.31 Aligned_cols=70 Identities=17% Similarity=0.243 Sum_probs=43.0
Q ss_pred CcCeEEecCHHHHhcCCCCceEEeecC--CC------------cCCCchhHHHHHHHhcCCCCcE--EecCCCCCccccc
Q psy9059 51 HTGITYLYTYSERLMGSNGLAMVFPLQ--EQ------------IPIQTPQQMSERIYMYTYSERL--MGSNGLAMVFPLQ 114 (269)
Q Consensus 51 ~~~l~~~~~~~~a~~~~~~~~V~E~vp--E~------------l~~K~k~~l~~~l~~~~~~~~i--iaSnTS~l~~p~~ 114 (269)
..+++.+.++ ++++||| +|+-++. .+ ..+- +++..+|.+++ |+++ +.||.... ++
T Consensus 61 ~~~v~~t~d~-~a~~~aD--iVIiaag~p~k~G~~R~dl~~~N~~i~--~~i~~~i~~~~-p~a~iivvtNPvd~---~t 131 (324)
T 3gvi_A 61 DAKFTGANDY-AAIEGAD--VVIVTAGVPRKPGMSRDDLLGINLKVM--EQVGAGIKKYA-PEAFVICITNPLDA---MV 131 (324)
T ss_dssp CCCEEEESSG-GGGTTCS--EEEECCSCCCC-----CHHHHHHHHHH--HHHHHHHHHHC-TTCEEEECCSSHHH---HH
T ss_pred CCEEEEeCCH-HHHCCCC--EEEEccCcCCCCCCCHHHHHHhhHHHH--HHHHHHHHHHC-CCeEEEecCCCcHH---HH
Confidence 3567777787 8998877 9998863 21 2233 67778888988 6666 45665433 11
Q ss_pred c-c-CCCCC-CCeEEEee
Q psy9059 115 E-Q-IPIQT-PHLIIGMH 129 (269)
Q Consensus 115 ~-~-~~~~~-p~R~i~~H 129 (269)
. + ..... |.|++|+.
T Consensus 132 ~~~~k~sg~p~~rviG~~ 149 (324)
T 3gvi_A 132 WALQKFSGLPAHKVVGMA 149 (324)
T ss_dssp HHHHHHHCCCGGGEEECC
T ss_pred HHHHHhcCCCHHHEEeec
Confidence 1 1 22233 46777775
No 130
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=28.61 E-value=41 Score=32.41 Aligned_cols=138 Identities=14% Similarity=0.150 Sum_probs=83.2
Q ss_pred cCeEEecCHHHHhcCCCCceEEeecCCCcCCCchhHHHHHHHhcCCCCcEEecCCCCCcccccccCCCCCCC--eEEEee
Q psy9059 52 TGITYLYTYSERLMGSNGLAMVFPLQEQIPIQTPQQMSERIYMYTYSERLMGSNGLAMVFPLQEQIPIQTPH--LIIGMH 129 (269)
Q Consensus 52 ~~l~~~~~~~~a~~~~~~~~V~E~vpE~l~~K~k~~l~~~l~~~~~~~~iiaSnTS~l~~p~~~~~~~~~p~--R~i~~H 129 (269)
.+++.. +++||+..|| +|+--+|. +.. .++|.+|.+++++++.|+= +.+| .+.. ....-|+ .++-+-
T Consensus 85 ~Gf~v~-~~~eA~~~AD--vV~~L~PD--~~q--~~vy~~I~p~lk~G~~L~f-aHGF--nI~~-~~i~pp~dvdVimVA 153 (491)
T 3ulk_A 85 NGFKVG-TYEELIPQAD--LVINLTPD--KQH--SDVVRTVQPLMKDGAALGY-SHGF--NIVE-VGEQIRKDITVVMVA 153 (491)
T ss_dssp TTCEEE-EHHHHGGGCS--EEEECSCG--GGH--HHHHHHHGGGSCTTCEEEE-SSCH--HHHT-TCCCCCTTSEEEEEE
T ss_pred CCCEec-CHHHHHHhCC--EEEEeCCh--hhH--HHHHHHHHhhCCCCCEEEe-cCcc--cccc-cccccCCCcceEEeC
Confidence 345544 8999998877 99999998 566 8999999999999998884 4566 3322 1122222 344444
Q ss_pred ccCCCCC----------C-cEEEEeCCCCCCHHHHHHHHHHHHhCCcE---EEEE--ec-c------CchhHHHHHHHHH
Q psy9059 130 YFSPVDK----------M-QLLEIITTEQTSQDTAASAVAVGLKQGKV---VITV--KD-G------PGFYTTRILSTML 186 (269)
Q Consensus 130 ffnP~~~----------~-~lVEiv~~~~Ts~e~~~~~~~~~~~lGk~---pv~v--kd-~------pGfI~nRll~al~ 186 (269)
|=-|-+. + .++=|-+-...+-...+.+.+++..+|-. .+.. ++ . .--|+.-.+.+++
T Consensus 154 PKgpG~~VR~~y~~G~GvP~liAVhqeqD~sG~a~~~AlayA~aiG~~raGvieTTF~eEtetDLfGEQaVLcGgl~~li 233 (491)
T 3ulk_A 154 PKCPGTEVREEYKRGFGVPTLIAVHPENDPKGEGMAIAKAWAAATGGHRAGVLESSFVAEVKSDLMGEQTILCGMLQAGS 233 (491)
T ss_dssp ESSCHHHHHHHHHTTCCCCEEEEECGGGCTTSCHHHHHHHHHHHHTGGGTCEEECCHHHHHHHHHHHHHTTTTHHHHHHH
T ss_pred CCCCcHHHHHHHHcCCCCceEEEEEeCCCCchhHHHHHHHHHHhcCCCcCceeeccHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 4333211 2 23434322223345567777888887753 3332 21 1 1124555667777
Q ss_pred HHHH-HHHHcCCCHH
Q psy9059 187 SEAM-RILQEGTSPK 200 (269)
Q Consensus 187 ~EA~-~lv~eGis~e 200 (269)
..++ .|++.|++|+
T Consensus 234 ~agFetLveaGy~P~ 248 (491)
T 3ulk_A 234 LLCFDKLVEEGTDPA 248 (491)
T ss_dssp HHHHHHHHHTTCCHH
T ss_pred HHHHHHHHHcCCCHH
Confidence 7776 6678898774
No 131
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=28.19 E-value=40 Score=30.05 Aligned_cols=52 Identities=6% Similarity=-0.066 Sum_probs=37.2
Q ss_pred CeEEecCHHHHhcCCCCceEEeecCCCcCCCchhHHHHHHHhcCCCCcEEecCCCC
Q psy9059 53 GITYLYTYSERLMGSNGLAMVFPLQEQIPIQTPQQMSERIYMYTYSERLMGSNGLA 108 (269)
Q Consensus 53 ~l~~~~~~~~a~~~~~~~~V~E~vpE~l~~K~k~~l~~~l~~~~~~~~iiaSnTS~ 108 (269)
+..+..+++|.+..+| +|+-++|-..+.+ +-+-++.-+.++++++|..-+++
T Consensus 189 g~~~~~~l~ell~~aD--vVil~~p~~~~t~--~~i~~~~l~~mk~gailIn~arg 240 (320)
T 1gdh_A 189 QATFHDSLDSLLSVSQ--FFSLNAPSTPETR--YFFNKATIKSLPQGAIVVNTARG 240 (320)
T ss_dssp TCEECSSHHHHHHHCS--EEEECCCCCTTTT--TCBSHHHHTTSCTTEEEEECSCG
T ss_pred CcEEcCCHHHHHhhCC--EEEEeccCchHHH--hhcCHHHHhhCCCCcEEEECCCC
Confidence 3466668999998777 9999999766655 43335565678889888655554
No 132
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=26.10 E-value=20 Score=32.62 Aligned_cols=17 Identities=18% Similarity=0.446 Sum_probs=15.0
Q ss_pred cCeEEecCHHHHhcCCC
Q psy9059 52 TGITYLYTYSERLMGSN 68 (269)
Q Consensus 52 ~~l~~~~~~~~a~~~~~ 68 (269)
++++++.++.||+.+||
T Consensus 222 ~~v~~~~d~~eav~~aD 238 (325)
T 1vlv_A 222 GSVSFTSNLEEALAGAD 238 (325)
T ss_dssp CEEEEESCHHHHHTTCS
T ss_pred CeEEEEcCHHHHHccCC
Confidence 35888999999999988
No 133
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=26.08 E-value=26 Score=31.46 Aligned_cols=47 Identities=13% Similarity=0.135 Sum_probs=31.8
Q ss_pred CcCeEEecCHHHHhcCCCCceEEeec--CC------------CcCCCchhHHHHHHHhcCCCCcEEe
Q psy9059 51 HTGITYLYTYSERLMGSNGLAMVFPL--QE------------QIPIQTPQQMSERIYMYTYSERLMG 103 (269)
Q Consensus 51 ~~~l~~~~~~~~a~~~~~~~~V~E~v--pE------------~l~~K~k~~l~~~l~~~~~~~~iia 103 (269)
..+++.+.++ ++++++| +|++++ |- +..+. +++..+|.+++| ++++.
T Consensus 64 ~~~i~~t~d~-~a~~~aD--vVIiaag~p~kpg~~R~dl~~~N~~i~--~~i~~~i~~~~p-~a~vl 124 (315)
T 3tl2_A 64 DANIIGTSDY-ADTADSD--VVVITAGIARKPGMSRDDLVATNSKIM--KSITRDIAKHSP-NAIIV 124 (315)
T ss_dssp CCCEEEESCG-GGGTTCS--EEEECCSCCCCTTCCHHHHHHHHHHHH--HHHHHHHHHHCT-TCEEE
T ss_pred CCEEEEcCCH-HHhCCCC--EEEEeCCCCCCCCCCHHHHHHHHHHHH--HHHHHHHHHhCC-CeEEE
Confidence 4677877775 6787766 999997 22 22344 788888999875 55443
No 134
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=25.55 E-value=55 Score=30.37 Aligned_cols=52 Identities=13% Similarity=0.073 Sum_probs=39.3
Q ss_pred CcCeEEecCHHHHhcCCCCceEEeecCCCcCCCchhHHHHHHHhcCCCCcEEecCC
Q psy9059 51 HTGITYLYTYSERLMGSNGLAMVFPLQEQIPIQTPQQMSERIYMYTYSERLMGSNG 106 (269)
Q Consensus 51 ~~~l~~~~~~~~a~~~~~~~~V~E~vpE~l~~K~k~~l~~~l~~~~~~~~iiaSnT 106 (269)
.+...+..+++|.++.+| +|.-++|-.-+.+ +=+-++.-+.++++++|--.+
T Consensus 182 ~~~~~~~~~l~ell~~aD--vV~l~~P~t~~t~--~li~~~~l~~mk~ga~lIN~a 233 (404)
T 1sc6_A 182 LGNATQVQHLSDLLNMSD--VVSLHVPENPSTK--NMMGAKEISLMKPGSLLINAS 233 (404)
T ss_dssp CTTCEECSCHHHHHHHCS--EEEECCCSSTTTT--TCBCHHHHHHSCTTEEEEECS
T ss_pred cCCceecCCHHHHHhcCC--EEEEccCCChHHH--HHhhHHHHhhcCCCeEEEECC
Confidence 345677789999998877 9999999988777 655455666788888876333
No 135
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=24.30 E-value=25 Score=31.98 Aligned_cols=17 Identities=18% Similarity=0.149 Sum_probs=15.3
Q ss_pred cCeEEecCHHHHhcCCC
Q psy9059 52 TGITYLYTYSERLMGSN 68 (269)
Q Consensus 52 ~~l~~~~~~~~a~~~~~ 68 (269)
++++.+.++.||+.|||
T Consensus 211 ~~v~~~~d~~eav~~aD 227 (323)
T 3gd5_A 211 AEVQILRDPFEAARGAH 227 (323)
T ss_dssp CCEEEESCHHHHHTTCS
T ss_pred CeEEEECCHHHHhcCCC
Confidence 46889999999999988
No 136
>1tzy_D Histone H4-VI; histone-fold, tetramer-dimer-dimer, DNA binding protein; 1.90A {Gallus gallus} SCOP: a.22.1.1 PDB: 1f66_B 1eqz_D 1hq3_D 1u35_B 2aro_D 2cv5_B* 2f8n_B 3nqu_B 3r45_B 3azg_B 3a6n_B 3an2_B 3av1_B 3av2_B 3ayw_B 3aze_B 3azf_B 3afa_B 3azh_B 3azk_B ...
Probab=24.23 E-value=1.1e+02 Score=22.83 Aligned_cols=57 Identities=11% Similarity=0.020 Sum_probs=38.2
Q ss_pred HHHHHHHHhCCcEEEEE-eccCc---hhHHHHHHHHHHHHHHHHH-cCC---CHHHHHHHHHhcCCC
Q psy9059 154 ASAVAVGLKQGKVVITV-KDGPG---FYTTRILSTMLSEAMRILQ-EGT---SPKDLDRLTKQFGFP 212 (269)
Q Consensus 154 ~~~~~~~~~lGk~pv~v-kd~pG---fI~nRll~al~~EA~~lv~-eGi---s~edID~a~~g~G~p 212 (269)
..+..++++.|.. .+ .+... -++...+..++.+|....+ .+- +++||..|++..|+|
T Consensus 33 ~~I~Rlar~~G~~--rIs~~a~~~l~~vle~~~~~V~~dA~~~a~hakRktIt~~DV~~Alr~~g~~ 97 (103)
T 1tzy_D 33 PAIRRLARRGGVK--RISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRT 97 (103)
T ss_dssp HHHHHHHHHTTCC--EECTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHcCcc--ccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCHHHHHHHHHHcCCC
Confidence 4667778888763 33 33332 3466667777788876665 342 999999999866665
No 137
>1dxh_A Ornithine carbamoyltransferase; transcarbamylase; 2.50A {Pseudomonas aeruginosa} SCOP: c.78.1.1 c.78.1.1 PDB: 1ort_A
Probab=23.91 E-value=16 Score=33.45 Aligned_cols=17 Identities=18% Similarity=0.178 Sum_probs=15.1
Q ss_pred cCeEEecCHHHHhcCCC
Q psy9059 52 TGITYLYTYSERLMGSN 68 (269)
Q Consensus 52 ~~l~~~~~~~~a~~~~~ 68 (269)
++++++.++.||+.+||
T Consensus 210 ~~v~~~~d~~eav~~aD 226 (335)
T 1dxh_A 210 AKLTLTEDPKEAVKGVD 226 (335)
T ss_dssp CEEEEESCHHHHTTTCS
T ss_pred CeEEEEeCHHHHhCCCC
Confidence 36888999999999988
No 138
>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A*
Probab=23.91 E-value=15 Score=33.68 Aligned_cols=21 Identities=14% Similarity=0.139 Sum_probs=17.0
Q ss_pred cCeEEecCHHHHhcCCCCceEEe
Q psy9059 52 TGITYLYTYSERLMGSNGLAMVF 74 (269)
Q Consensus 52 ~~l~~~~~~~~a~~~~~~~~V~E 74 (269)
++++++.++.||+.||| .|.=
T Consensus 210 ~~v~~~~d~~eav~~aD--vvyt 230 (333)
T 1duv_G 210 GNITLTEDVAKGVEGAD--FIYT 230 (333)
T ss_dssp CEEEEESCHHHHHTTCS--EEEE
T ss_pred CeEEEEECHHHHhCCCC--EEEe
Confidence 36889999999999988 4443
No 139
>2yfw_B Histone H4, H4; cell cycle, kinetochore, centromere, histone chaperone, BUDD; 2.60A {Kluyveromyces lactis nrrl y-1140}
Probab=23.12 E-value=1.2e+02 Score=22.65 Aligned_cols=57 Identities=11% Similarity=0.044 Sum_probs=36.6
Q ss_pred HHHHHHHHhCCcEEEEE-eccC---chhHHHHHHHHHHHHHHHHH-cCC---CHHHHHHHHHhcCCC
Q psy9059 154 ASAVAVGLKQGKVVITV-KDGP---GFYTTRILSTMLSEAMRILQ-EGT---SPKDLDRLTKQFGFP 212 (269)
Q Consensus 154 ~~~~~~~~~lGk~pv~v-kd~p---GfI~nRll~al~~EA~~lv~-eGi---s~edID~a~~g~G~p 212 (269)
..+..++++.|.. .+ .+.. --++...+..++.+|....+ .+- +++||..|++..|+|
T Consensus 33 ~~I~Rlar~~G~~--rIs~~a~~~l~~vle~~~~~V~~dA~~~a~hakRktvt~~DV~~Alr~~g~~ 97 (103)
T 2yfw_B 33 PAIRRLARRGGVK--RISGLIYEEVRNVLKTFLESVIRDAVTYTEHAKRKTVTSLDVVYALKRQGRT 97 (103)
T ss_dssp HHHHHHHHHTTCC--EECTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHHHHHC--
T ss_pred HHHHHHHHHcCcc--ccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCcHHHHHHHHHHcCCC
Confidence 4667778888763 33 3332 23456667777788876665 342 999999999865665
No 140
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=22.58 E-value=1.3e+02 Score=26.24 Aligned_cols=41 Identities=5% Similarity=0.083 Sum_probs=29.4
Q ss_pred eEEecCHHHHhcCCCCceEEeecCCCcCCCchhHHHHHHHhcCCCCcEEec
Q psy9059 54 ITYLYTYSERLMGSNGLAMVFPLQEQIPIQTPQQMSERIYMYTYSERLMGS 104 (269)
Q Consensus 54 l~~~~~~~~a~~~~~~~~V~E~vpE~l~~K~k~~l~~~l~~~~~~~~iiaS 104 (269)
++.+.+++|++.++| +|+.++|.. +.++.. +.++++++|.+
T Consensus 184 ~~~~~~~~e~v~~aD--iVi~atp~~------~~v~~~--~~l~~g~~vi~ 224 (312)
T 2i99_A 184 VRVCSSVQEAVAGAD--VIITVTLAT------EPILFG--EWVKPGAHINA 224 (312)
T ss_dssp CEECSSHHHHHTTCS--EEEECCCCS------SCCBCG--GGSCTTCEEEE
T ss_pred eEEeCCHHHHHhcCC--EEEEEeCCC------CcccCH--HHcCCCcEEEe
Confidence 677889999998766 999999963 333332 45677777665
No 141
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=22.53 E-value=74 Score=28.93 Aligned_cols=52 Identities=4% Similarity=-0.008 Sum_probs=38.2
Q ss_pred CeEEecCHHHHhcCCCCceEEeecCCCcCCCchhHHHHHHHhcCCCCcEEecCCCC
Q psy9059 53 GITYLYTYSERLMGSNGLAMVFPLQEQIPIQTPQQMSERIYMYTYSERLMGSNGLA 108 (269)
Q Consensus 53 ~l~~~~~~~~a~~~~~~~~V~E~vpE~l~~K~k~~l~~~l~~~~~~~~iiaSnTS~ 108 (269)
+..+..+++|.++.+| +|+-++|-.-+.+ +-+-++.-+.++++++|-..+++
T Consensus 208 g~~~~~~l~ell~~aD--vV~l~~P~t~~t~--~li~~~~l~~mk~ga~lIn~arG 259 (364)
T 2j6i_A 208 GARRVENIEELVAQAD--IVTVNAPLHAGTK--GLINKELLSKFKKGAWLVNTARG 259 (364)
T ss_dssp TEEECSSHHHHHHTCS--EEEECCCCSTTTT--TCBCHHHHTTSCTTEEEEECSCG
T ss_pred CcEecCCHHHHHhcCC--EEEECCCCChHHH--HHhCHHHHhhCCCCCEEEECCCC
Confidence 3566679999998777 9999999877766 54445566678888877655444
No 142
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=22.49 E-value=29 Score=31.56 Aligned_cols=20 Identities=10% Similarity=0.122 Sum_probs=16.7
Q ss_pred cCeEEecCHHHHhcCCCCceEE
Q psy9059 52 TGITYLYTYSERLMGSNGLAMV 73 (269)
Q Consensus 52 ~~l~~~~~~~~a~~~~~~~~V~ 73 (269)
++++.+.++.||+.||| .|.
T Consensus 220 ~~v~~~~d~~eav~~aD--vvy 239 (328)
T 3grf_A 220 GSIKIFHDCKKGCEGVD--VVY 239 (328)
T ss_dssp CEEEEESSHHHHHTTCS--EEE
T ss_pred CeEEEEcCHHHHhcCCC--EEE
Confidence 56889999999999988 553
No 143
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=22.40 E-value=62 Score=29.41 Aligned_cols=51 Identities=8% Similarity=0.002 Sum_probs=39.7
Q ss_pred cCeEEecCHHHHhcCCCCceEEeecCCCcCCCchhHHHHHHHhcCCCCcEEecCC
Q psy9059 52 TGITYLYTYSERLMGSNGLAMVFPLQEQIPIQTPQQMSERIYMYTYSERLMGSNG 106 (269)
Q Consensus 52 ~~l~~~~~~~~a~~~~~~~~V~E~vpE~l~~K~k~~l~~~l~~~~~~~~iiaSnT 106 (269)
.+.++..+++|.++.+| +|+=++|-.-+.+ +-+-++.-+.++++++|---+
T Consensus 201 ~g~~~~~~l~ell~~aD--iV~l~~Plt~~t~--~li~~~~l~~mk~gailIN~a 251 (352)
T 3gg9_A 201 DGFAVAESKDALFEQSD--VLSVHLRLNDETR--SIITVADLTRMKPTALFVNTS 251 (352)
T ss_dssp TTCEECSSHHHHHHHCS--EEEECCCCSTTTT--TCBCHHHHTTSCTTCEEEECS
T ss_pred cCceEeCCHHHHHhhCC--EEEEeccCcHHHH--HhhCHHHHhhCCCCcEEEECC
Confidence 34678889999998877 9999999877777 666667777788998885433
No 144
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=22.10 E-value=24 Score=31.96 Aligned_cols=17 Identities=6% Similarity=0.047 Sum_probs=15.0
Q ss_pred cCeEEecCHHHHhcCCC
Q psy9059 52 TGITYLYTYSERLMGSN 68 (269)
Q Consensus 52 ~~l~~~~~~~~a~~~~~ 68 (269)
++++.+.++.||+.+||
T Consensus 209 ~~~~~~~d~~eav~~aD 225 (315)
T 1pvv_A 209 GSFELLHDPVKAVKDAD 225 (315)
T ss_dssp CEEEEESCHHHHTTTCS
T ss_pred CeEEEEeCHHHHhCCCC
Confidence 35888999999999988
No 145
>1id3_B Histone H4; nucleosome core particle, chromatin, protein/DNA interaction, nucleoprotein, supercoiled DNA; 3.10A {Saccharomyces cerevisiae} SCOP: a.22.1.1
Probab=22.07 E-value=1.5e+02 Score=22.02 Aligned_cols=59 Identities=10% Similarity=0.121 Sum_probs=37.6
Q ss_pred HHHHHHHHhCCcEEEE--EeccCchhHHHHHHHHHHHHHHHHH-cCC---CHHHHHHHHHhcCCC
Q psy9059 154 ASAVAVGLKQGKVVIT--VKDGPGFYTTRILSTMLSEAMRILQ-EGT---SPKDLDRLTKQFGFP 212 (269)
Q Consensus 154 ~~~~~~~~~lGk~pv~--vkd~pGfI~nRll~al~~EA~~lv~-eGi---s~edID~a~~g~G~p 212 (269)
+.+..++++.|..-+- +.+.--.++...+..++.+|....+ .+- +++||..|++-.|+|
T Consensus 32 ~~I~Rlar~~Gv~rIS~da~~~l~~~le~fi~~I~~dA~~~a~HakRKTVt~~DV~~ALkr~g~~ 96 (102)
T 1id3_B 32 PAIRRLARRGGVKRISGLIYEEVRAVLKSFLESVIRDSVTYTEHAKRKTVTSLDVVYALKRQGRT 96 (102)
T ss_dssp HHHHHHHHHTTCCEECTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHcCchhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCcHHHHHHHHHHcCCC
Confidence 4566777887753321 1112223556667778888886665 342 899999999855776
No 146
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=20.78 E-value=74 Score=28.81 Aligned_cols=51 Identities=6% Similarity=0.012 Sum_probs=37.0
Q ss_pred eEEecCHHHHhcCCCCceEEeecCCCcCCCchhHHHHHHHhcCCCCcEEecCCCC
Q psy9059 54 ITYLYTYSERLMGSNGLAMVFPLQEQIPIQTPQQMSERIYMYTYSERLMGSNGLA 108 (269)
Q Consensus 54 l~~~~~~~~a~~~~~~~~V~E~vpE~l~~K~k~~l~~~l~~~~~~~~iiaSnTS~ 108 (269)
..+..+++|.++.+| +|+-++|-.-+.+ +=+-++.-+.++++++|-..+++
T Consensus 211 ~~~~~~l~ell~~aD--vV~l~~P~t~~t~--~li~~~~l~~mk~gailIN~arg 261 (347)
T 1mx3_A 211 LQRVSTLQDLLFHSD--CVTLHCGLNEHNH--HLINDFTVKQMRQGAFLVNTARG 261 (347)
T ss_dssp CEECSSHHHHHHHCS--EEEECCCCCTTCT--TSBSHHHHTTSCTTEEEEECSCT
T ss_pred CeecCCHHHHHhcCC--EEEEcCCCCHHHH--HHhHHHHHhcCCCCCEEEECCCC
Confidence 456678999998777 9999999766665 54445566678888877654444
No 147
>4amu_A Ornithine carbamoyltransferase, catabolic; ornithine transcarbamoylase, hydrolase; 2.50A {Mycoplasma penetrans} PDB: 4anf_A
Probab=20.76 E-value=12 Score=34.85 Aligned_cols=20 Identities=0% Similarity=-0.024 Sum_probs=16.9
Q ss_pred cCeEEecCHHHHhcCCCCceEE
Q psy9059 52 TGITYLYTYSERLMGSNGLAMV 73 (269)
Q Consensus 52 ~~l~~~~~~~~a~~~~~~~~V~ 73 (269)
++++.+.++.|||.||| .|.
T Consensus 237 ~~i~~~~d~~eav~~aD--VVy 256 (365)
T 4amu_A 237 GSLRFSTDKILAAQDAD--VIY 256 (365)
T ss_dssp CEEEEESCHHHHTTTCS--EEE
T ss_pred CEEEEECCHHHHhcCCC--EEE
Confidence 56899999999999988 555
No 148
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=20.30 E-value=84 Score=28.53 Aligned_cols=52 Identities=12% Similarity=0.120 Sum_probs=39.0
Q ss_pred CeEEecCHHHHhcCCCCceEEeecCCCcCCCchhHHHHHHHhcCCCCcEEecCCCC
Q psy9059 53 GITYLYTYSERLMGSNGLAMVFPLQEQIPIQTPQQMSERIYMYTYSERLMGSNGLA 108 (269)
Q Consensus 53 ~l~~~~~~~~a~~~~~~~~V~E~vpE~l~~K~k~~l~~~l~~~~~~~~iiaSnTS~ 108 (269)
+.++..+++|.++.+| +|+=++|-..+.+ +-+-++.-+.++++++|--.+.+
T Consensus 207 g~~~~~~l~ell~~aD--vV~l~~Plt~~t~--~li~~~~l~~mk~gailIN~aRG 258 (351)
T 3jtm_A 207 GAKFVEDLNEMLPKCD--VIVINMPLTEKTR--GMFNKELIGKLKKGVLIVNNARG 258 (351)
T ss_dssp CCEECSCHHHHGGGCS--EEEECSCCCTTTT--TCBSHHHHHHSCTTEEEEECSCG
T ss_pred CCeEcCCHHHHHhcCC--EEEECCCCCHHHH--HhhcHHHHhcCCCCCEEEECcCc
Confidence 4577789999998877 9999999776666 65556666778888877544433
Done!